Query 021951
Match_columns 305
No_of_seqs 259 out of 1171
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 11:46:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021951.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021951hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 2.2E-47 7.6E-52 361.8 22.9 242 51-304 6-293 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 3E-43 1E-47 332.8 26.6 240 52-304 8-287 (403)
3 2apr_A Rhizopuspepsin; hydrola 100.0 1.5E-43 5.1E-48 325.8 22.0 215 64-304 13-240 (325)
4 1b5f_A Protein (cardosin A); h 100.0 9.2E-44 3.1E-48 313.7 19.2 221 55-305 4-239 (239)
5 3psg_A Pepsinogen; hydrolase(a 100.0 7.6E-44 2.6E-48 333.2 17.0 224 53-304 45-281 (370)
6 2x0b_A Renin; hydrolase-hormon 100.0 1.5E-43 5.3E-48 332.3 18.7 221 53-304 50-291 (383)
7 3c9x_A Trichoderma reesei aspa 100.0 4.1E-43 1.4E-47 323.4 18.4 216 63-303 12-240 (329)
8 1am5_A Pepsin, acid proteinase 100.0 1.3E-42 4.5E-47 319.3 21.4 221 54-304 2-236 (324)
9 1tzs_A Cathepsin E; hydrolase, 100.0 1.7E-42 5.8E-47 322.0 21.3 223 52-304 11-250 (351)
10 1oew_A Endothiapepsin; hydrola 100.0 1.2E-42 3.9E-47 320.4 19.6 214 64-303 13-239 (329)
11 1t6e_X Xylanase inhibitor; two 100.0 1.4E-42 4.9E-47 325.8 20.5 233 53-304 2-257 (381)
12 1dpj_A Proteinase A; proteinas 100.0 1.1E-42 3.9E-47 320.3 19.0 220 55-304 4-240 (329)
13 1mpp_A Pepsin; hydrolase(acid 100.0 1.8E-41 6.1E-46 316.1 25.4 226 51-304 5-259 (361)
14 3cms_A Chymosin B; hydrolase, 100.0 5E-42 1.7E-46 315.3 19.1 221 54-304 4-238 (323)
15 4aa9_A Chymosin; hydrolase, as 100.0 2.7E-42 9.1E-47 316.5 16.9 221 56-304 3-235 (320)
16 1htr_B Gastricsin; aspartyl pr 100.0 3.1E-42 1E-46 317.5 16.8 218 56-304 5-239 (329)
17 1j71_A Candidapepsin, aspartic 100.0 1.1E-41 3.8E-46 314.4 20.3 218 53-304 2-240 (334)
18 3k1w_A Renin; protease, altern 100.0 1.1E-41 3.7E-46 315.0 19.7 222 52-304 6-248 (341)
19 2qzx_A Candidapepsin-5; aspart 100.0 2.7E-41 9.3E-46 312.7 22.2 218 53-304 2-240 (342)
20 3fv3_A SAPP1P-secreted asparti 100.0 6E-41 2.1E-45 309.9 23.5 215 53-304 2-242 (339)
21 3pvk_A Candidapepsin-2; hydrol 100.0 3.6E-41 1.2E-45 311.6 21.5 216 53-304 2-240 (342)
22 1miq_A Plasmepsin; aspartic pr 100.0 1.7E-41 5.9E-46 317.8 15.7 217 53-304 51-284 (375)
23 1ibq_A Aspergillopepsin; aspar 100.0 8.3E-41 2.9E-45 307.5 19.5 211 64-302 12-234 (325)
24 1qdm_A Prophytepsin; aspartic 100.0 4.9E-41 1.7E-45 323.5 18.5 222 53-304 41-281 (478)
25 2bju_A Plasmepsin II; aspartic 100.0 9.6E-41 3.3E-45 318.8 18.9 218 53-304 127-360 (453)
26 1yg9_A Aspartic protease BLA G 100.0 9.5E-41 3.2E-45 307.7 16.8 221 53-304 6-241 (330)
27 1izd_A Aspartic proteinase; su 100.0 7.8E-41 2.7E-45 307.4 15.9 210 65-303 14-235 (323)
28 1bxo_A Protein (penicillopepsi 100.0 1.8E-40 6.3E-45 304.9 14.9 208 65-302 14-233 (323)
29 2ewy_A Beta-secretase 2; BACE2 100.0 3.2E-39 1.1E-43 303.1 22.3 218 57-304 6-248 (383)
30 3qvc_A Histo-aspartic protease 100.0 4.5E-40 1.6E-44 314.3 15.8 217 53-304 126-359 (451)
31 1wkr_A Polyporopepsin; hydrola 100.0 7.7E-39 2.6E-43 296.0 21.9 206 55-304 4-234 (340)
32 2qp8_A Beta-secretase 1; BACE1 100.0 9.8E-39 3.3E-43 301.1 21.6 219 55-304 12-259 (395)
33 3lpj_A Beta-secretase 1; alzhe 100.0 3.4E-38 1.2E-42 302.6 20.8 211 65-304 73-312 (455)
34 3vf3_A Beta-secretase 1; struc 100.0 9.6E-38 3.3E-42 294.9 22.4 211 65-304 27-266 (402)
35 1lya_B Cathepsin D; lysosomal 99.9 3.4E-22 1.1E-26 175.7 10.7 132 171-304 2-148 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 6.7E-22 2.3E-26 149.5 9.7 88 55-166 4-95 (97)
37 2hs1_A HIV-1 protease; ultra-h 87.1 0.7 2.4E-05 33.9 4.2 27 69-97 10-36 (99)
38 1fmb_A EIAV protease; hydrolas 87.0 0.7 2.4E-05 34.3 4.2 26 68-95 9-34 (104)
39 3liy_A Protease; hydrolase, hy 86.3 0.72 2.5E-05 34.7 3.9 29 69-97 12-43 (116)
40 3ec0_A Protease; HIV-2, inhibi 84.6 1 3.5E-05 33.0 4.0 27 69-97 10-36 (99)
41 2i1a_A DNA damage-inducible pr 81.4 1.4 4.8E-05 34.3 4.0 30 65-96 24-53 (148)
42 2hah_A Protease, retropepsin; 79.0 2 6.9E-05 32.4 4.0 26 69-97 16-41 (116)
43 3sqf_A Protease; folded monome 78.5 2.4 8.2E-05 31.8 4.2 27 69-97 11-37 (114)
44 2i1a_A DNA damage-inducible pr 77.8 3 0.0001 32.3 4.9 30 264-298 30-59 (148)
45 3s8i_A Protein DDI1 homolog 1; 75.3 2.8 9.5E-05 33.0 4.0 30 264-298 28-57 (148)
46 3s8i_A Protein DDI1 homolog 1; 71.4 3.7 0.00013 32.2 3.9 31 65-97 22-52 (148)
47 3slz_A GAG-Pro-POL polyprotein 65.7 6.4 0.00022 30.3 4.0 29 67-97 22-50 (132)
48 3ka2_A [L-Ala51;Gly51']HIV-1 p 65.3 6 0.0002 32.8 4.0 27 68-96 9-35 (203)
49 2rsp_A RSV protease; hydrolase 62.6 6.5 0.00022 29.9 3.5 22 74-97 27-48 (124)
50 3ka2_A [L-Ala51;Gly51']HIV-1 p 44.0 22 0.00075 29.4 4.0 27 69-97 114-140 (203)
51 1fmb_A EIAV protease; hydrolas 44.0 22 0.00076 26.0 3.7 35 257-296 5-39 (104)
52 1b5f_A Protein (cardosin A); h 42.0 27 0.00091 29.2 4.4 40 54-97 180-227 (239)
53 2hs1_A HIV-1 protease; ultra-h 37.4 29 0.001 25.1 3.4 31 257-292 5-35 (99)
54 3ec0_A Protease; HIV-2, inhibi 33.8 34 0.0012 24.8 3.2 30 257-291 5-34 (99)
55 3slz_A GAG-Pro-POL polyprotein 33.7 39 0.0013 25.8 3.7 26 262-292 24-49 (132)
56 2hah_A Protease, retropepsin; 33.4 41 0.0014 25.1 3.7 32 256-293 10-41 (116)
57 1mpp_A Pepsin; hydrolase(acid 32.4 66 0.0022 28.4 5.7 44 242-293 4-49 (361)
58 1lya_B Cathepsin D; lysosomal 27.0 53 0.0018 27.1 3.9 32 66-97 99-137 (241)
59 1qdm_A Prophytepsin; aspartic 26.9 59 0.002 30.3 4.5 39 55-97 224-270 (478)
60 3c9x_A Trichoderma reesei aspa 24.5 50 0.0017 28.9 3.3 41 54-97 184-230 (329)
61 2apr_A Rhizopuspepsin; hydrola 23.1 1.1E+02 0.0037 26.6 5.3 42 53-97 183-229 (325)
62 1bxo_A Protein (penicillopepsi 22.7 59 0.002 28.3 3.5 42 53-97 179-224 (323)
63 3aup_A SBG7S, BG, basic 7S glo 22.5 1E+02 0.0036 27.6 5.2 39 247-293 11-52 (403)
64 1oew_A Endothiapepsin; hydrola 22.5 61 0.0021 28.3 3.5 41 54-97 183-229 (329)
65 2bju_A Plasmepsin II; aspartic 21.2 1E+02 0.0034 28.6 4.8 40 54-97 307-349 (453)
66 1izd_A Aspartic proteinase; su 20.7 61 0.0021 28.2 3.1 32 66-97 189-225 (323)
67 1ibq_A Aspergillopepsin; aspar 20.2 68 0.0023 27.9 3.3 41 54-97 179-225 (325)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=2.2e-47 Score=361.80 Aligned_cols=242 Identities=22% Similarity=0.363 Sum_probs=201.5
Q ss_pred cCceeEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcCC
Q 021951 51 CSSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHA 130 (305)
Q Consensus 51 ~~~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~~C~~~~~~~y~p~~S~v~c~s~~C~~~~~ 130 (305)
.+.+.+|++++. .+++|+++|.||||||++.|+|||||+++||+|. +|. ....|. .++|.++.|.....
T Consensus 6 ~~~~~~pv~~d~-~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~-~c~-----~Sst~~----~v~C~s~~C~~~~~ 74 (413)
T 3vla_A 6 PSALVVPVKKDA-STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD-QNY-----VSSTYR----PVRCRTSQCSLSGS 74 (413)
T ss_dssp CSEEEEEEEECT-TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SSC-----CCTTCE----ECBTTSHHHHHTTC
T ss_pred CccEEEEeeecC-CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC-CCC-----CCCCcC----ccCCCccccccccc
Confidence 578899999985 6999999999999999999999999999999998 662 122333 38999999987765
Q ss_pred CCCCC--------CCCCCCceeEeee-CCCCeEEEEEEEEEEEEeecCCC-----cCCCceEEEeeeecCCCCCCCCcce
Q 021951 131 PGHHN--------CEDPAQCDYELEY-ADGGSSLGVLVKDAFAFNYTNGQ-----RLNPRLALGCGYNQVPGASYHPLDG 196 (305)
Q Consensus 131 ~~~~~--------c~~~~~~~~~~~Y-~~Gs~~~G~~~~D~v~l~~~~g~-----~~~~~~~Fg~~~~~~~~~~~~~~~G 196 (305)
+.+.. |. ++.|.|.+.| +||+.+.|.+++|+|+|+..+|. +.++++.|||++.+.........+|
T Consensus 75 ~~~~~c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dG 153 (413)
T 3vla_A 75 IACGDCFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVG 153 (413)
T ss_dssp CEEECCSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCE
T ss_pred CCCcccccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCccccccc
Confidence 43332 33 2579999999 58888999999999999865553 4678999999987521123457899
Q ss_pred EEecCCCCChHHHHhhhccccceeeEEeecC--CCcceEEECCCCC-------CCCC-cEEEEcccCCC-----------
Q 021951 197 ILGLGKGKSSIVSQLHSQKLIRNVVGHCLSG--GGGGFLFFGDDLY-------DSSR-VVWTSMSSDYT----------- 255 (305)
Q Consensus 197 IlGLg~~~~s~~~ql~~~~~i~~~Fs~~L~~--~~~G~l~fG~~~~-------~~g~-~~~~pl~~~~~----------- 255 (305)
|||||++.+|++.||.+++.++++||+||.+ ..+|+|+||+.+. +.++ +.|+||+.++.
T Consensus 154 IlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~ 233 (413)
T 3vla_A 154 MAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEP 233 (413)
T ss_dssp EEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCC
T ss_pred ccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCC
Confidence 9999999999999999988789999999996 4679999998753 3567 99999998731
Q ss_pred -cceeeEeeEEEECCEEeeeC----------CCCEEEeccccceeecHHHHHHHHHHHhc
Q 021951 256 -KYYSPGVAELFFGGETTGLK----------NLPVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 256 -~~y~v~l~~i~v~~~~~~~~----------~~~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
.+|+|.+++|+||++.+.++ .+++||||||++++||+++|++|.++|.+
T Consensus 234 ~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~ 293 (413)
T 3vla_A 234 SVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIK 293 (413)
T ss_dssp CCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHH
T ss_pred CceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHH
Confidence 59999999999999998764 36899999999999999999999999875
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=3e-43 Score=332.82 Aligned_cols=240 Identities=18% Similarity=0.315 Sum_probs=193.5
Q ss_pred CceeEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcCCC
Q 021951 52 SSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAP 131 (305)
Q Consensus 52 ~~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~~C~~~~~~~y~p~~S~v~c~s~~C~~~~~~ 131 (305)
+.+.+||.++. .+++|+++|.||||+|++.|+|||||+++||+|. +|. ....|. .++|.++.|.....+
T Consensus 8 ~~~~~pl~~~~-~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~~~-----~Sst~~----~~~C~s~~C~~~~~~ 76 (403)
T 3aup_A 8 NLVVLPVQNDG-STGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE-QQY-----SSKTYQ----APFCHSTQCSRANTH 76 (403)
T ss_dssp CCEEEEEEECT-TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SCC-----CCSSCB----CCCTTBHHHHHTTCC
T ss_pred ccEEEeeecCC-CCceEEEEEECCCCCceeEEEEECCCCceeECCC-CCC-----CCCCCC----ccCCCCccccCcccc
Confidence 56789998653 5889999999999999999999999999999998 652 122333 389999999877654
Q ss_pred CC--------CCCCCCCCceeEeeeC-CCCeEEEEEEEEEEEEeecCCC-------cCCCceEEEeeeecCCC-CCCCCc
Q 021951 132 GH--------HNCEDPAQCDYELEYA-DGGSSLGVLVKDAFAFNYTNGQ-------RLNPRLALGCGYNQVPG-ASYHPL 194 (305)
Q Consensus 132 ~~--------~~c~~~~~~~~~~~Y~-~Gs~~~G~~~~D~v~l~~~~g~-------~~~~~~~Fg~~~~~~~~-~~~~~~ 194 (305)
.+ ..|.. +.|.|.+.|+ ||+.+.|.+++|+|+|++.+|. ..++++.|||++..... +.....
T Consensus 77 ~c~~c~~~~~s~~~~-~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~ 155 (403)
T 3aup_A 77 QCLSCPAASRPGCHK-NTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNT 155 (403)
T ss_dssp CEEECSSSCBTTBCS-SEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTC
T ss_pred CccccCCCCCCCCCC-CcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCC
Confidence 21 23432 5899999998 7889999999999999865443 56789999999876322 334578
Q ss_pred ceEEecCCCCChHHHHhhhccccceeeEEeecC--CCcceEEECCCC--CC--C-C-----CcEEEEcccCCCcceeeEe
Q 021951 195 DGILGLGKGKSSIVSQLHSQKLIRNVVGHCLSG--GGGGFLFFGDDL--YD--S-S-----RVVWTSMSSDYTKYYSPGV 262 (305)
Q Consensus 195 ~GIlGLg~~~~s~~~ql~~~~~i~~~Fs~~L~~--~~~G~l~fG~~~--~~--~-g-----~~~~~pl~~~~~~~y~v~l 262 (305)
+||||||++.++++.||.+....+++||+||.+ ...|.|+||+ + ++ . | ++.|+||+.++..+|.|.+
T Consensus 156 dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l 234 (403)
T 3aup_A 156 QGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRV 234 (403)
T ss_dssp CEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECE
T ss_pred ceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEE
Confidence 999999999999999997654448999999986 4689999998 4 23 3 4 9999999987336999999
Q ss_pred eEEEECCEEe-eeCC----------CCEEEeccccceeecHHHHHHHHHHHhc
Q 021951 263 AELFFGGETT-GLKN----------LPVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 263 ~~i~v~~~~~-~~~~----------~~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
++|+|+++.+ .++. +.+||||||++++||+++|++|.++|.+
T Consensus 235 ~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~ 287 (403)
T 3aup_A 235 NSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQ 287 (403)
T ss_dssp EEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHH
T ss_pred EEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHH
Confidence 9999999988 5432 3599999999999999999999999953
No 3
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.5e-43 Score=325.81 Aligned_cols=215 Identities=24% Similarity=0.393 Sum_probs=183.4
Q ss_pred CCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcCCCCCCCCCCCCCce
Q 021951 64 PTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCD 143 (305)
Q Consensus 64 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~~C~~~~~~~y~p~~S~v~c~s~~C~~~~~~~~~~c~~~~~~~ 143 (305)
.+.+|+++|.||||+|++.|+|||||+++||+|. +|..| .+.++.|+|++|+ +++. ..|.
T Consensus 13 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c~~c-~~~~~~y~~~~Ss------T~~~------------~~~~ 72 (325)
T 2apr_A 13 NDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIAST-LCTNC-GSGQTKYDPNQSS------TYQA------------DGRT 72 (325)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCSSC-CTTSCCBCGGGCT------TCEE------------EEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccC-CCchH-hcCCCCCCcccCC------Ceee------------CCCE
Confidence 4789999999999999999999999999999999 99999 6778899998773 1111 3689
Q ss_pred eEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCCCCCCCcceEEecCCCCC-------hHHHHhhhccc
Q 021951 144 YELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKS-------SIVSQLHSQKL 216 (305)
Q Consensus 144 ~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~-------s~~~ql~~~~~ 216 (305)
|.+.|++|+.+.|.+++|+|+| ++..+.++.|||++.....+.....+||||||++.+ +++.+|.++++
T Consensus 73 ~~i~Yg~Gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~ 148 (325)
T 2apr_A 73 WSISYGDGSSASGILAKDNVNL----GGLLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGL 148 (325)
T ss_dssp EEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTS
T ss_pred EEEEECCCCCEEEEEEEEEEEE----CCEEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHHHHhcCC
Confidence 9999999988999999999999 456788999999987633233345899999998754 47899999998
Q ss_pred c-ceeeEEeecC---CCcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEeeeCCCCEEEeccccceee
Q 021951 217 I-RNVVGHCLSG---GGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYL 290 (305)
Q Consensus 217 i-~~~Fs~~L~~---~~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTs~~~l 290 (305)
+ +++||+||.+ ...|.|+||+.+ ++.+++.|+|+.... .+|.|.+++|+|++ .+...+..+||||||++++|
T Consensus 149 i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~-~~~~v~l~~i~vg~-~~~~~~~~~iiDSGTs~~~l 226 (325)
T 2apr_A 149 ISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSR-GWWGITVDRATVGT-STVASSFDGILDTGTTLLIL 226 (325)
T ss_dssp CSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTT-SSCEEEECEEEETT-EEEECCEEEEECTTCSSEEE
T ss_pred CCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCC-CEEEEEEeEEEECC-EecCCCceEEEecCCccEEC
Confidence 8 8999999953 468999999865 467999999998654 79999999999999 44445678999999999999
Q ss_pred cHHHHHHHHHHHhc
Q 021951 291 NRVTYQTLTSIVKR 304 (305)
Q Consensus 291 p~~~~~~l~~~~~~ 304 (305)
|+++|++|++++.+
T Consensus 227 P~~~~~~~~~~~~~ 240 (325)
T 2apr_A 227 PNNIAASVARAYGA 240 (325)
T ss_dssp EHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHhc
Confidence 99999999999865
No 4
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=9.2e-44 Score=313.67 Aligned_cols=221 Identities=20% Similarity=0.333 Sum_probs=185.6
Q ss_pred eEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCC---CCCCCCCCCCCCCCCCCCCCcccccCcCCC
Q 021951 55 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV---RCVEAPHPLYRPSNDLVPCEDPICASLHAP 131 (305)
Q Consensus 55 ~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~---~C~~~~~~~y~p~~S~v~c~s~~C~~~~~~ 131 (305)
.+||.+. .+.+|+++|.||||+|++.|+|||||+++||+|. .|. .|.. ++.|+|++|+ +++.
T Consensus 4 ~~~l~n~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~~C~~--~~~y~~~~Ss------T~~~---- 68 (239)
T 1b5f_A 4 VVALTND--RDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSS-KCINSKACRA--HSMYESSDSS------TYKE---- 68 (239)
T ss_dssp EEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSCHHHHT--SCCBCGGGCT------TCEE----
T ss_pred eeeeeec--CCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcC-CCCCCcccCC--CCCCCCccCC------Ceee----
Confidence 4777653 4889999999999999999999999999999999 896 5764 5789998773 1111
Q ss_pred CCCCCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCC-CCCCCcceEEecCCCCCh--HH
Q 021951 132 GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS--IV 208 (305)
Q Consensus 132 ~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~s--~~ 208 (305)
..|.|.+.|++| .+.|.+++|+|+| ++..+.++.|||+...... +.....+||||||++.++ ++
T Consensus 69 --------~~~~~~i~Yg~G-s~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~ 135 (239)
T 1b5f_A 69 --------NGTFGAIIYGTG-SITGFFSQDSVTI----GDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVW 135 (239)
T ss_dssp --------EEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHH
T ss_pred --------CCcEEEEEECCC-cEEEEEEEEEEEE----CCcEEccEEEEEEEeccCccccccCcceEEecCccccccHHH
Confidence 357899999999 5899999999999 4567889999999875321 344578999999999876 56
Q ss_pred HHhhhcccc-ceeeEEeecCC----CcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEeee--CCCCE
Q 021951 209 SQLHSQKLI-RNVVGHCLSGG----GGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGL--KNLPV 279 (305)
Q Consensus 209 ~ql~~~~~i-~~~Fs~~L~~~----~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~--~~~~~ 279 (305)
.+|.+++++ +++||+||.+. ..|.|+||+.+ ++.+++.|+|+... .+|.|.+++|.|+++.+.+ ....+
T Consensus 136 ~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~~~~a 213 (239)
T 1b5f_A 136 YNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQ--YYWQFGIGDVLIGDKSTGFCAPGCQA 213 (239)
T ss_dssp HHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEE--TTEEEEECCEEETTEECCTTTTCEEE
T ss_pred HHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccC--CeEEEEeeEEEECCEEecccCCCCEE
Confidence 789999988 89999999853 57999999875 45689999999876 5999999999999998754 24689
Q ss_pred EEeccccceeecHHHHHHHHHHHhcC
Q 021951 280 VFDSGSSYTYLNRVTYQTLTSIVKRT 305 (305)
Q Consensus 280 iiDSGTs~~~lp~~~~~~l~~~~~~~ 305 (305)
||||||++++||+++|++|.++|+++
T Consensus 214 iiDTGTt~~~lP~~~~~~i~~~iga~ 239 (239)
T 1b5f_A 214 FADSGTSLLSGPTAIVTQINHAIGAN 239 (239)
T ss_dssp EECTTCSSEEECHHHHHHHHHHTTCC
T ss_pred EEecCcchhhCCHHHHHHHHHHhCCC
Confidence 99999999999999999999999864
No 5
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=7.6e-44 Score=333.24 Aligned_cols=224 Identities=22% Similarity=0.355 Sum_probs=188.8
Q ss_pred ceeEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcCCCC
Q 021951 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPG 132 (305)
Q Consensus 53 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~~C~~~~~~~y~p~~S~v~c~s~~C~~~~~~~ 132 (305)
....||.+ +.+.+|+++|+||||||++.|+|||||+++||+|. .|..|....++.|+|++|+ ++..
T Consensus 45 ~~~~~l~n--~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~-~C~~~~C~~~~~y~~~~Ss------T~~~----- 110 (370)
T 3psg_A 45 IGDEPLEN--YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV-YCSSLACSDHNQFNPDDSS------TFEA----- 110 (370)
T ss_dssp SCCCTTGG--GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGTTSCCBCGGGCT------TCEE-----
T ss_pred cceeccee--ccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECC-CCCCcccCCCCCCCCccCc------CcEE-----
Confidence 34567754 35889999999999999999999999999999999 9987665678999998873 1111
Q ss_pred CCCCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCC-CCCCCcceEEecCCCCC------
Q 021951 133 HHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKS------ 205 (305)
Q Consensus 133 ~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~------ 205 (305)
..|.|.+.|++| ++.|.+++|+|+| |+..++++.|||++..... +.....+||||||++.+
T Consensus 111 -------~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~ 178 (370)
T 3psg_A 111 -------TSQELSITYGTG-SMTGILGYDTVQV----GGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGAT 178 (370)
T ss_dssp -------EEEEEEEESSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCC
T ss_pred -------CCcEEEEEeCCc-eEEEEEEEEEEee----CCcccCCeEEEEEEeecccccccCCccceeccCCccccccCCC
Confidence 357999999999 5999999999999 4678899999999876332 44567899999999864
Q ss_pred hHHHHhhhcccc-ceeeEEeecCC--CcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEeee-CCCCE
Q 021951 206 SIVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGL-KNLPV 279 (305)
Q Consensus 206 s~~~ql~~~~~i-~~~Fs~~L~~~--~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~-~~~~~ 279 (305)
+++.+|.++++| +++||+||.+. .+|.|+||+.+ ++.+++.|+|+... .+|+|.+++|+|+++.+.. ..+.+
T Consensus 179 ~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~--~~w~v~l~~i~v~g~~~~~~~~~~a 256 (370)
T 3psg_A 179 PVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVE--GYWQITLDSITMDGETIACSGGCQA 256 (370)
T ss_dssp CHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEE--TTEEEEECEEESSSSEEECTTCEEE
T ss_pred CHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccccc--ceeEEEEeEEEECCEEEecCCCceE
Confidence 478899999999 89999999964 58999999765 46899999999976 5999999999999988765 35789
Q ss_pred EEeccccceeecHHHHHHHHHHHhc
Q 021951 280 VFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 280 iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
||||||+++++|++++++|.+++++
T Consensus 257 iiDTGTs~~~lP~~~~~~i~~~i~a 281 (370)
T 3psg_A 257 IVDTGTSLLTGPTSAIANIQSDIGA 281 (370)
T ss_dssp EECTTCCSEEEEHHHHHHHHHHTTC
T ss_pred EEcCCCCcEECCHHHHHHHHHHhCC
Confidence 9999999999999999999999865
No 6
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.5e-43 Score=332.28 Aligned_cols=221 Identities=19% Similarity=0.299 Sum_probs=186.1
Q ss_pred ceeEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCC----CCCCCCCCCCCCCCCCCCCCcccccCc
Q 021951 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV----RCVEAPHPLYRPSNDLVPCEDPICASL 128 (305)
Q Consensus 53 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~----~C~~~~~~~y~p~~S~v~c~s~~C~~~ 128 (305)
....||.+ +.+.+|+++|.||||||+|.|+|||||+++||+|. .|. .|. .++.|+|++|+ +++.
T Consensus 50 ~~~~~l~n--~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~-~C~~~~~~C~--~~~~y~~~~Ss------T~~~- 117 (383)
T 2x0b_A 50 TSSVILTN--YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACV--YHKLFDASDSS------SYKH- 117 (383)
T ss_dssp -CEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTSHHHH--TSCCBCGGGCT------TCEE-
T ss_pred cceEeeee--cCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEecc-CCCCCccccc--CCCCCCCCCCC------cEEE-
Confidence 45588876 34889999999999999999999999999999999 896 587 45889998873 1111
Q ss_pred CCCCCCCCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCC-CCCCCcceEEecCCCCCh-
Q 021951 129 HAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS- 206 (305)
Q Consensus 129 ~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~s- 206 (305)
..|.|.+.|++| +++|.+++|+|+| |+..+. +.|||++..... +.....|||||||++.++
T Consensus 118 -----------~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~ 180 (383)
T 2x0b_A 118 -----------NGTELTLRYSTG-TVSGFLSQDIITV----GGITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAI 180 (383)
T ss_dssp -----------EEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCG
T ss_pred -----------CCcEEEEEcCCc-cEEEEEEeeEEEE----cCceEE-EEEEEEEecCCcccccCCCceEeccCCCcccc
Confidence 468999999999 5999999999999 456777 999999886321 345678999999998654
Q ss_pred -----HHHHhhhcccc-ceeeEEeecCC------CcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEe
Q 021951 207 -----IVSQLHSQKLI-RNVVGHCLSGG------GGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETT 272 (305)
Q Consensus 207 -----~~~ql~~~~~i-~~~Fs~~L~~~------~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~ 272 (305)
++.+|.+++++ +++||+||.+. .+|+|+||+.+ ++.|++.|+|+... .+|+|.+++|+|+++.+
T Consensus 181 ~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~--~~w~v~l~~i~v~~~~~ 258 (383)
T 2x0b_A 181 GRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT--GVWQIQMKGVSVGSSTL 258 (383)
T ss_dssp GGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSST--TSCEEEECEEEESSCCC
T ss_pred CCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCC--ceEEEEEeEEEeCCceE
Confidence 67889999998 89999999854 27999999875 45789999999876 69999999999999875
Q ss_pred ee-CCCCEEEeccccceeecHHHHHHHHHHHhc
Q 021951 273 GL-KNLPVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 273 ~~-~~~~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
.. ..+.+||||||+++++|+++|++|.++|++
T Consensus 259 ~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a 291 (383)
T 2x0b_A 259 LCEDGCLALVDTGASYISGSTSSIEKLMEALGA 291 (383)
T ss_dssp BSTTCEEEEECTTCSSEEECHHHHHHHHHHHTC
T ss_pred EcCCCcEEEEcCCCceEEcCHHHHHHHHHHhCC
Confidence 33 357899999999999999999999999875
No 7
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=4.1e-43 Score=323.36 Aligned_cols=216 Identities=19% Similarity=0.288 Sum_probs=182.9
Q ss_pred cCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcCCCCCCCCCCCCCc
Q 021951 63 YPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQC 142 (305)
Q Consensus 63 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~~C~~~~~~~y~p~~S~v~c~s~~C~~~~~~~~~~c~~~~~~ 142 (305)
+.+.+|+++|.||||+|++.|+|||||+++||+|. +|..|..+.++.|+|++|+ +|+.+ +.|
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~~~~~~y~~~~Ss------T~~~~-----------~~~ 73 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSS-ETPKSSATGHAIYTPSKSS------TSKKV-----------SGA 73 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCGGGCT------TCEEC-----------TTC
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecC-CCCccccCCCCcCCcccCc------CceEc-----------CCC
Confidence 35789999999999999999999999999999999 9998877778999998773 22221 357
Q ss_pred eeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCCC-CCCCcceEEecCCCCC---------hHHHHhh
Q 021951 143 DYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGA-SYHPLDGILGLGKGKS---------SIVSQLH 212 (305)
Q Consensus 143 ~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~~-~~~~~~GIlGLg~~~~---------s~~~ql~ 212 (305)
.|.+.|++|+.+.|.+++|+|+| |+..+.++.|||++.....+ .....+||||||++.+ +++++|.
T Consensus 74 ~~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~ 149 (329)
T 3c9x_A 74 SWSISYGDGSSSSGDVYTDKVTI----GGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAA 149 (329)
T ss_dssp BEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHH
T ss_pred eEEEEeCCCCcEEEEEEEEEEEE----CCEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHH
Confidence 99999999977999999999999 45678899999998753221 1246899999999754 3677888
Q ss_pred hcccc-ceeeEEeecCCCcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEeeeCCCCEEEecccccee
Q 021951 213 SQKLI-RNVVGHCLSGGGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTY 289 (305)
Q Consensus 213 ~~~~i-~~~Fs~~L~~~~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTs~~~ 289 (305)
++ + +++||+||.++..|.|+||+.+ ++.+++.|+|+.... .+|.|.+++|+|+++.+......+||||||++++
T Consensus 150 ~~--i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~-~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~ 226 (329)
T 3c9x_A 150 SS--LAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVAYTPVDNSQ-GFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLL 226 (329)
T ss_dssp TT--SSSSEEEEECCSSSCEEEEESSCCGGGCSSCEEEEECBCTT-SSCEEEECCEEETTCCCCSCCEEEEECTTCCSEE
T ss_pred Hh--cCCCEEEEEecCCCCcEEEEeCcChhhcccceEEEEccCCC-ceEEEEEeeEEECCEeccCCCceEEEECCCCcEe
Confidence 76 6 8999999998779999999875 578999999998544 7999999999999987755567899999999999
Q ss_pred ecHHHHHHHHHHHh
Q 021951 290 LNRVTYQTLTSIVK 303 (305)
Q Consensus 290 lp~~~~~~l~~~~~ 303 (305)
||+++|++|.++|.
T Consensus 227 lp~~~~~~i~~~i~ 240 (329)
T 3c9x_A 227 LDDNVVDAYYANVQ 240 (329)
T ss_dssp ECHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHhCC
Confidence 99999999999873
No 8
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=1.3e-42 Score=319.27 Aligned_cols=221 Identities=21% Similarity=0.410 Sum_probs=187.1
Q ss_pred eeEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCC--CCCCCCCCCCCCCCCCCCCCcccccCcCCC
Q 021951 54 LLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHAP 131 (305)
Q Consensus 54 ~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~--~C~~~~~~~y~p~~S~v~c~s~~C~~~~~~ 131 (305)
+.+||.+. .+.+|+++|.||||+|++.|+|||||+++||+|. .|. .|. .++.|+|++|+ +++.
T Consensus 2 ~~~~l~n~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~~---- 66 (324)
T 1am5_A 2 VTEQMKNE--ADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSS-HCSAQACS--NHNKFKPRQSS------TYVE---- 66 (324)
T ss_dssp EEEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEECBT-TCCSHHHH--TSCCBCGGGCT------TCEE----
T ss_pred ceeeeecC--CCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC-CCCccccc--CCCcCCCccCC------CeEe----
Confidence 35788763 4889999999999999999999999999999999 897 476 46889998773 1111
Q ss_pred CCCCCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCC-CCCCCcceEEecCCCCC-----
Q 021951 132 GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKS----- 205 (305)
Q Consensus 132 ~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~----- 205 (305)
..|.|.+.|++| ++.|.+++|+|+|+ +..+.++.|||++..... +.....+||||||++.+
T Consensus 67 --------~~~~~~i~Yg~G-s~~G~~~~D~v~~g----~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 133 (324)
T 1am5_A 67 --------TGKTVDLTYGTG-GMRGILGQDTVSVG----GGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGA 133 (324)
T ss_dssp --------EEEEEEEECSSC-EEEEEEEEEEEESS----SSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGC
T ss_pred --------CCcEEEEEECCC-CeEEEEEECceeEC----CcEEcccEEEEEEecccccccCCCCceEEecCCccccccCC
Confidence 367999999999 56999999999994 567889999999886332 44567899999999854
Q ss_pred -hHHHHhhhcccc-ceeeEEeecCC--CcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEeeeCCCCE
Q 021951 206 -SIVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPV 279 (305)
Q Consensus 206 -s~~~ql~~~~~i-~~~Fs~~L~~~--~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~~~~~~ 279 (305)
+++.+|.+++++ +++||+||.+. ..|.|+||+.+ ++.+++.|+|+... .+|.|.+++|+|+++.+......+
T Consensus 134 ~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~~a 211 (324)
T 1am5_A 134 VPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAE--KYWQVALDGITVNGQTAACEGCQA 211 (324)
T ss_dssp CCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEE--TTEEEEECEEEETTEECCCCCEEE
T ss_pred CchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCC--cEEEEEEeEEEECCceeeccCceE
Confidence 478899999988 89999999864 48999999875 46799999999876 599999999999998865444789
Q ss_pred EEeccccceeecHHHHHHHHHHHhc
Q 021951 280 VFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 280 iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
||||||++++||+++|++|.+++.+
T Consensus 212 iiDSGTt~~~lp~~~~~~l~~~~~~ 236 (324)
T 1am5_A 212 IVDTGTSKIVAPVSALANIMKDIGA 236 (324)
T ss_dssp EECTTCSSEEECTTTHHHHHHHHTC
T ss_pred EEecCCccEECCHHHHHHHHHHhCC
Confidence 9999999999999999999999875
No 9
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.7e-42 Score=321.97 Aligned_cols=223 Identities=21% Similarity=0.325 Sum_probs=185.6
Q ss_pred CceeEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCC--CCCCCCCCCCCCCCCCCCCCcccccCcC
Q 021951 52 SSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLH 129 (305)
Q Consensus 52 ~~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~--~C~~~~~~~y~p~~S~v~c~s~~C~~~~ 129 (305)
+.+.+||.+ +.+.+|+++|.||||+|++.|+|||||+++||+|. .|. .|. .++.|+|++|+ +++.
T Consensus 11 ~~~~~~l~n--~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~~-- 77 (351)
T 1tzs_A 11 QSAKEPLIN--YLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSV-YCTSPACK--THSRFQPSQSS------TYSQ-- 77 (351)
T ss_dssp ---CCTTGG--GSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGT--TSCCBCGGGCT------TCBC--
T ss_pred Cccceecee--cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC-CCCccccC--CCCcCCcccCc------ceEE--
Confidence 344566764 34789999999999999999999999999999999 997 676 56899998773 1111
Q ss_pred CCCCCCCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCC-CCCCCcceEEecCCCCCh--
Q 021951 130 APGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS-- 206 (305)
Q Consensus 130 ~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~s-- 206 (305)
..|.|.+.|++| ++.|.+++|+|+| |+..+.++.|||++..... +.....+||||||++.++
T Consensus 78 ----------~~~~~~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 142 (351)
T 1tzs_A 78 ----------PGQSFSIQYGTG-SLSGIIGADQVSV----EGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVG 142 (351)
T ss_dssp ----------CSCEEEEESSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGG
T ss_pred ----------CCCEEEEEeCCC-CeEEEEEEeEEEE----CCeEECCeEEEEEEeccccccccCCCceEEecCCcccccc
Confidence 468999999999 5899999999999 4577889999999875322 334578999999998654
Q ss_pred ----HHHHhhhcccc-ceeeEEeecCCC----cceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEeee-
Q 021951 207 ----IVSQLHSQKLI-RNVVGHCLSGGG----GGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGL- 274 (305)
Q Consensus 207 ----~~~ql~~~~~i-~~~Fs~~L~~~~----~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~- 274 (305)
++.+|.+++++ +++||+||.+.. .|.|+||+.+ ++.+++.|+|+... .+|.|.+++|+|+++.+..
T Consensus 143 ~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~ 220 (351)
T 1tzs_A 143 GVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQ--AYWQIALDNIQVGGTVMFCS 220 (351)
T ss_dssp GCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEE--TTEEEEEEEEEETTEEEECT
T ss_pred CCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCC--ceEEEEeCEEEECCceEEcC
Confidence 77899999988 899999998642 7999999875 46799999999876 5999999999999988643
Q ss_pred CCCCEEEeccccceeecHHHHHHHHHHHhc
Q 021951 275 KNLPVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 275 ~~~~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
....+||||||++++||+++|++|.+++++
T Consensus 221 ~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~ 250 (351)
T 1tzs_A 221 EGCQAIVDTGTSLITGPSDKIKQLQNAIGA 250 (351)
T ss_dssp TCEEEEECTTCSSEEECHHHHHHHHHHHTC
T ss_pred CCceEEeccCCcceeCCHHHHHHHHHHhCC
Confidence 346899999999999999999999999865
No 10
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.2e-42 Score=320.37 Aligned_cols=214 Identities=21% Similarity=0.281 Sum_probs=180.2
Q ss_pred CCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcCCCCCCCCCCCCCce
Q 021951 64 PTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCD 143 (305)
Q Consensus 64 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~~C~~~~~~~y~p~~S~v~c~s~~C~~~~~~~~~~c~~~~~~~ 143 (305)
.+.+|+++|.||||+|++.|+|||||+++||+|. +|..|.. .++.|+|++|+ +++.+ +.|.
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~-~~~~y~~~~Ss------T~~~~-----------~~~~ 73 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSS-ETTASEV-XQTIYTPSKST------TAKLL-----------SGAT 73 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCGGGC--CCCBCGGGCT------TCEEE-----------EEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecC-CCCcccc-ccCccCCccCc------cceec-----------CCCe
Confidence 4779999999999999999999999999999999 9998876 67899998873 11111 2578
Q ss_pred eEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCCC-CCCCcceEEecCCCCC---------hHHHHhhh
Q 021951 144 YELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGA-SYHPLDGILGLGKGKS---------SIVSQLHS 213 (305)
Q Consensus 144 ~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~~-~~~~~~GIlGLg~~~~---------s~~~ql~~ 213 (305)
|.+.|++|+.+.|.+++|+|+| |+..+.++.|||++.....+ .....+||||||++.+ +++++|.+
T Consensus 74 ~~i~Yg~Gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~ 149 (329)
T 1oew_A 74 WSISYGDGSSSSGDVYTDTVSV----GGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKA 149 (329)
T ss_dssp EEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTT
T ss_pred EEEEeCCCCcEEEEEEEEEEEE----CCEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHH
Confidence 9999999977999999999999 45778899999998763221 1246899999999754 36788887
Q ss_pred cccc-ceeeEEeecCCCcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEeeeCCCCEEEeccccceee
Q 021951 214 QKLI-RNVVGHCLSGGGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYL 290 (305)
Q Consensus 214 ~~~i-~~~Fs~~L~~~~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTs~~~l 290 (305)
+ + +++||+||.++..|.|+||+.+ ++.+++.|+|+.... .+|.|.+++|+|+++.+......+||||||++++|
T Consensus 150 ~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~-~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~l 226 (329)
T 1oew_A 150 S--LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQ-GFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYL 226 (329)
T ss_dssp T--SSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEEECBCTT-SSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEE
T ss_pred h--ccCcEEEEEccCCCCeEEEEeccChHhcccceEEEEccCCC-ceEEEEEeeEEECCeeccCCCceEEEeCCCCCEEC
Confidence 6 6 8999999998778999999765 567999999998554 79999999999999876545578999999999999
Q ss_pred cHHHHHHHHHHHh
Q 021951 291 NRVTYQTLTSIVK 303 (305)
Q Consensus 291 p~~~~~~l~~~~~ 303 (305)
|+++|++|.++|.
T Consensus 227 P~~~~~~l~~~i~ 239 (329)
T 1oew_A 227 PATVVSAYWAQVS 239 (329)
T ss_dssp CHHHHHHHHTTST
T ss_pred CHHHHHHHHHhCC
Confidence 9999999999873
No 11
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.4e-42 Score=325.82 Aligned_cols=233 Identities=21% Similarity=0.350 Sum_probs=187.9
Q ss_pred ceeEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcCCCC
Q 021951 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPG 132 (305)
Q Consensus 53 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~~C~~~~~~~y~p~~S~v~c~s~~C~~~~~~~ 132 (305)
++.+||.++ +.+.+|+++|.|||| |+|||||+++||+|. +|. .|. .++|.++.|...+.+.
T Consensus 2 ~~~~pv~~~-~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~-~~~--------~~~----~~~C~s~~C~~~~~~~ 62 (381)
T 1t6e_X 2 PVLAPVTKD-PATSLYTIPFHDGAS-----LVLDVAGPLVWSTCD-GGQ--------PPA----EIPCSSPTCLLANAYP 62 (381)
T ss_dssp CEEEEEEEC-TTTCCEEEEEETTEE-----EEEETTCCCEEECCC-TTC--------CCC----CCBTTSHHHHHHHSSC
T ss_pred ceEEeEEec-CCCcEEEEEEeCCCE-----EEEECCCCceEEeCC-CCC--------CCC----ccCCCCchhccccCCC
Confidence 468899866 368999999999998 999999999999987 552 132 3789988997654443
Q ss_pred CCCCCC--------CCCc-eeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCce----EEEeeeecCCCCCCCCcceEEe
Q 021951 133 HHNCED--------PAQC-DYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRL----ALGCGYNQVPGASYHPLDGILG 199 (305)
Q Consensus 133 ~~~c~~--------~~~~-~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~----~Fg~~~~~~~~~~~~~~~GIlG 199 (305)
...|.. .+.| .|.+.|++|+.++|.+++|+|+|+..+|...++++ .|||+..+.........+||||
T Consensus 63 ~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIlG 142 (381)
T 1t6e_X 63 APGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGVAG 142 (381)
T ss_dssp CTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTTEEEEEE
T ss_pred CCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCCCCCCceEEE
Confidence 446653 2457 59999999987899999999999865544455554 6799977521112467899999
Q ss_pred cCCCCChHHHHhhhccccceeeEEeecCCCcceEEECCCCC----CCCCcEEEEcccCCC-cceeeEeeEEEECCEEeee
Q 021951 200 LGKGKSSIVSQLHSQKLIRNVVGHCLSGGGGGFLFFGDDLY----DSSRVVWTSMSSDYT-KYYSPGVAELFFGGETTGL 274 (305)
Q Consensus 200 Lg~~~~s~~~ql~~~~~i~~~Fs~~L~~~~~G~l~fG~~~~----~~g~~~~~pl~~~~~-~~y~v~l~~i~v~~~~~~~ 274 (305)
||++.++++.||.++++++++||+||.+..+|+|+||+.+. +.+++.|+||+.++. .+|.|.+++|+|+++.+.+
T Consensus 143 Lg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~ 222 (381)
T 1t6e_X 143 LANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPV 222 (381)
T ss_dssp CSSSTTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCC
T ss_pred eCCCcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecC
Confidence 99999999999999886699999999976789999998653 468999999997632 4677999999999998865
Q ss_pred C-----CCCEEEeccccceeecHHHHHHHHHHHhc
Q 021951 275 K-----NLPVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 275 ~-----~~~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
+ .+.+||||||++++||+++|++|.++|.+
T Consensus 223 ~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~ 257 (381)
T 1t6e_X 223 PEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTK 257 (381)
T ss_dssp CTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHH
T ss_pred CHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHH
Confidence 4 35799999999999999999999988864
No 12
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.1e-42 Score=320.29 Aligned_cols=220 Identities=20% Similarity=0.343 Sum_probs=186.4
Q ss_pred eEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCC--CCCCCCCCCCCCCCCCCCCcccccCcCCCC
Q 021951 55 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVR--CVEAPHPLYRPSNDLVPCEDPICASLHAPG 132 (305)
Q Consensus 55 ~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~~--C~~~~~~~y~p~~S~v~c~s~~C~~~~~~~ 132 (305)
.+||.+. .+.+|+++|.||||+|++.|+|||||+++||+|. +|.. |. .++.|+|++|+ +++.
T Consensus 4 ~~~l~~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~~----- 67 (329)
T 1dpj_A 4 DVPLTNY--LNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSN-ECGSLACF--LHSKYDHEASS------SYKA----- 67 (329)
T ss_dssp EEECEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGCT------TCEE-----
T ss_pred ceeeeec--CCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecC-CCCCcccC--CcCcCCcccCc------CeEE-----
Confidence 4677653 4789999999999999999999999999999999 8986 65 45789998773 1111
Q ss_pred CCCCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCC-CCCCCCcceEEecCCCCCh-----
Q 021951 133 HHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVP-GASYHPLDGILGLGKGKSS----- 206 (305)
Q Consensus 133 ~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~-~~~~~~~~GIlGLg~~~~s----- 206 (305)
..|.|.+.|++| ++.|.+++|+|+| |+..++++.|||++.... .+.....+||||||++.++
T Consensus 68 -------~~~~~~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~ 135 (329)
T 1dpj_A 68 -------NGTEFAIQYGTG-SLEGYISQDTLSI----GDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVV 135 (329)
T ss_dssp -------EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCC
T ss_pred -------CCcEEEEEECCc-eEEEEEEEEEEEE----CCeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCC
Confidence 468999999999 8999999999999 457788999999987632 1334568999999998654
Q ss_pred -HHHHhhhcccc-ceeeEEeecCC-----CcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEeeeCCC
Q 021951 207 -IVSQLHSQKLI-RNVVGHCLSGG-----GGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNL 277 (305)
Q Consensus 207 -~~~ql~~~~~i-~~~Fs~~L~~~-----~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~~~~ 277 (305)
++.+|.+++++ +++||+||.+. .+|.|+||+.+ ++.+++.|+|+... .+|.|.+++|+|+++.+...+.
T Consensus 136 ~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~ 213 (329)
T 1dpj_A 136 PPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRK--AYWEVKFEGIGLGDEYAELESH 213 (329)
T ss_dssp CHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSB--TTBEEEEEEEEETTEEEECSSC
T ss_pred CHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCC--ceEEEEeeeEEECCeEecCCCc
Confidence 46789999988 89999999753 37999999875 45789999999876 5999999999999998877778
Q ss_pred CEEEeccccceeecHHHHHHHHHHHhc
Q 021951 278 PVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 278 ~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
.+||||||++++||+++|++|.+++++
T Consensus 214 ~aiiDSGTt~~~lP~~~~~~l~~~~~~ 240 (329)
T 1dpj_A 214 GAAIDTGTSLITLPSGLAEMINAEIGA 240 (329)
T ss_dssp EEEECTTCSCEEECHHHHHHHHHHHTC
T ss_pred cEEeeCCCCcEECCHHHHHHHHHHhCC
Confidence 999999999999999999999999864
No 13
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.8e-41 Score=316.14 Aligned_cols=226 Identities=20% Similarity=0.318 Sum_probs=189.8
Q ss_pred cCceeEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCC---CCCCCCCCCCCCCCCCCCCCcccccC
Q 021951 51 CSSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV---RCVEAPHPLYRPSNDLVPCEDPICAS 127 (305)
Q Consensus 51 ~~~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~---~C~~~~~~~y~p~~S~v~c~s~~C~~ 127 (305)
.+...+||.+. .+.+|+++|.||||+|++.|+|||||+++||+|. +|. .|. .++.|+|++|+ +++.
T Consensus 5 g~~~~~~l~~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~~C~--~~~~y~~~~Ss------T~~~ 73 (361)
T 1mpp_A 5 GSVDTPGLYDF--DLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHK-GCDNSEGCV--GKRFFDPSSSS------TFKE 73 (361)
T ss_dssp CCEEEEEEEET--TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCGGGTCC--SSCCBCGGGCT------TCEE
T ss_pred CccceEEeecC--CCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCC-CCCCCccCC--CCCcCCCccCC------ceEe
Confidence 34556889763 4789999999999999999999999999999999 998 787 46889998773 1111
Q ss_pred cCCCCCCCCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCC------CCCCCCcceEEecC
Q 021951 128 LHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVP------GASYHPLDGILGLG 201 (305)
Q Consensus 128 ~~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~------~~~~~~~~GIlGLg 201 (305)
..|.|.+.|++|+ +.|.+++|+|+| |+..+.++.|||++.... .+.....+||||||
T Consensus 74 ------------~~~~~~i~Yg~Gs-~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg 136 (361)
T 1mpp_A 74 ------------TDYNLNITYGTGG-ANGIYFRDSITV----GGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAA 136 (361)
T ss_dssp ------------EEEEEEEECSSCE-EEEEEEEEEEEE----TTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECS
T ss_pred ------------cCCeEEEEECCce-EEEEEEEEEEEE----CCEEEeceEEEEEEeccCccccccccccCCCCCEEEeC
Confidence 3579999999995 899999999999 457788999999987643 23456789999999
Q ss_pred CCCC------------hHHHHhhhcccc-ceeeEEeecCC-CcceEEECCCC--CCCCCcEEEEcccCCC--cceeeEee
Q 021951 202 KGKS------------SIVSQLHSQKLI-RNVVGHCLSGG-GGGFLFFGDDL--YDSSRVVWTSMSSDYT--KYYSPGVA 263 (305)
Q Consensus 202 ~~~~------------s~~~ql~~~~~i-~~~Fs~~L~~~-~~G~l~fG~~~--~~~g~~~~~pl~~~~~--~~y~v~l~ 263 (305)
++.+ +++.+|.++++| +++||+||.+. ..|.|+||+.+ ++.+++.|+|+..... .+|.|.++
T Consensus 137 ~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~ 216 (361)
T 1mpp_A 137 YPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVT 216 (361)
T ss_dssp CGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEE
T ss_pred CcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEe
Confidence 9754 466789999988 89999999974 58999999875 4679999999988752 29999999
Q ss_pred EEEECCEEeee-CCCCEE-EeccccceeecHHHHHHHHHHHhc
Q 021951 264 ELFFGGETTGL-KNLPVV-FDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 264 ~i~v~~~~~~~-~~~~~i-iDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
+|+|+++.+.. ....+| |||||++++||+++|++|.++|.+
T Consensus 217 ~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~ 259 (361)
T 1mpp_A 217 GVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALP 259 (361)
T ss_dssp EEEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCT
T ss_pred EEEECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCC
Confidence 99999988743 347899 999999999999999999999875
No 14
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=5e-42 Score=315.31 Aligned_cols=221 Identities=17% Similarity=0.344 Sum_probs=185.8
Q ss_pred eeEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCC--CCCCCCCCCCCCCCCCCCCCCcccccCcCCC
Q 021951 54 LLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPC--VRCVEAPHPLYRPSNDLVPCEDPICASLHAP 131 (305)
Q Consensus 54 ~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C--~~C~~~~~~~y~p~~S~v~c~s~~C~~~~~~ 131 (305)
...||.+ +.+.+|+++|.||||+|++.|+|||||+++||+|. +| ..|. .++.|+|++|+ +++.
T Consensus 4 ~~~~l~n--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~~---- 68 (323)
T 3cms_A 4 ASVPLTN--YLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSI-YCKSNACK--NHQRFDPRKSS------TFQN---- 68 (323)
T ss_dssp EEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGCT------TCEE----
T ss_pred ceeeeEe--ccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCC-CCCccccc--CCCCCCCccCC------CeEE----
Confidence 4577875 34789999999999999999999999999999999 89 4676 46889998873 1211
Q ss_pred CCCCCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCC-CCCCCcceEEecCCCCC-----
Q 021951 132 GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKS----- 205 (305)
Q Consensus 132 ~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~----- 205 (305)
..|.|.+.|++| ++.|.+++|+|+| |+..+.++.|||++..... +.....+||||||++.+
T Consensus 69 --------~~~~~~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 135 (323)
T 3cms_A 69 --------LGKPLSIHYGTG-SMQGILGYDTVTV----SNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYS 135 (323)
T ss_dssp --------EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTC
T ss_pred --------CCcEEEEEeCCC-CeEEEEEEEEEEE----CCeEEeccEEEEEEecccccccccCCceEEecCcchhhccCC
Confidence 368999999999 5899999999999 4567889999999876321 22356899999998854
Q ss_pred -hHHHHhhhcccc-ceeeEEeecCC-CcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEeeeC-CCCE
Q 021951 206 -SIVSQLHSQKLI-RNVVGHCLSGG-GGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLK-NLPV 279 (305)
Q Consensus 206 -s~~~ql~~~~~i-~~~Fs~~L~~~-~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~~-~~~~ 279 (305)
+++.+|.+++.+ +++||+||.+. ..|.|+||+.+ ++.+++.|+|+... .+|.|.+++|+|+++.+.++ ...+
T Consensus 136 ~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~~~a 213 (323)
T 3cms_A 136 IPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTVQ--QYWQFTVDSVTISGVVVACEGGCQA 213 (323)
T ss_dssp CCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSSB--TTBEEEEEEEEETTEEEESTTCEEE
T ss_pred CCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECccC--CeEEEEEeeEEECCEEeecCCCcEE
Confidence 578899999988 89999999864 45999999875 35689999999876 59999999999999987643 4689
Q ss_pred EEeccccceeecHHHHHHHHHHHhc
Q 021951 280 VFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 280 iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
||||||++++||+++|++|.+++.+
T Consensus 214 iiDSGTt~~~lP~~~~~~l~~~~~~ 238 (323)
T 3cms_A 214 ILDTGTSKLVGPSSDILNIQQAIGA 238 (323)
T ss_dssp EECTTCCSEEECHHHHHHHHHHHTC
T ss_pred EEecCCccEeCCHHHHHHHHHHhCC
Confidence 9999999999999999999999864
No 15
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=2.7e-42 Score=316.54 Aligned_cols=221 Identities=20% Similarity=0.360 Sum_probs=183.0
Q ss_pred EEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcCCCCCCC
Q 021951 56 FQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHN 135 (305)
Q Consensus 56 ~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~~C~~~~~~~y~p~~S~v~c~s~~C~~~~~~~~~~ 135 (305)
.||.+ +.+.+|+++|.||||||++.|++||||+++||+|. .|..|....++.|+|++|. +++.
T Consensus 3 ~~l~n--~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~-~C~~~~C~~~~~y~~~~Ss------T~~~-------- 65 (320)
T 4aa9_A 3 EPLTS--YLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSI-YCKSNVCKNHHRFDPRKSS------TFRN-------- 65 (320)
T ss_dssp -------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHTSCCBCGGGCT------TCEE--------
T ss_pred cccee--ccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCC-CCCccccCCCCCCCCCCCc------CeEc--------
Confidence 46654 34789999999999999999999999999999999 9984333356899998873 1111
Q ss_pred CCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCC-CCCCCcceEEecCCCC------ChHH
Q 021951 136 CEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGK------SSIV 208 (305)
Q Consensus 136 c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~------~s~~ 208 (305)
..|.|.+.|++| .+.|.+++|+|+| |+..++++.|||++..... +.....+||||||++. .+++
T Consensus 66 ----~~~~~~i~Yg~g-s~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~ 136 (320)
T 4aa9_A 66 ----LGKPLSIHYGTG-SMEGFLGYDTVTV----SNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVF 136 (320)
T ss_dssp ----EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHH
T ss_pred ----CCcEEEEEECCc-EEEEEEEEEEEEE----CCEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHH
Confidence 367999999999 5899999999999 4577889999999876331 3345689999999874 3588
Q ss_pred HHhhhcccc-ceeeEEeecCC-CcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEeeeC-CCCEEEec
Q 021951 209 SQLHSQKLI-RNVVGHCLSGG-GGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLK-NLPVVFDS 283 (305)
Q Consensus 209 ~ql~~~~~i-~~~Fs~~L~~~-~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~~-~~~~iiDS 283 (305)
.+|.++++| +++||+||.+. ..|.|+||+.+ ++.+++.|+|+... .+|.|.+++|+++++.+..+ ...+||||
T Consensus 137 ~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~~i~v~~~~~~~~~~~~~iiDs 214 (320)
T 4aa9_A 137 DNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVTLQ--QYWQFTVDSVTINGVAVACVGGCQAILDT 214 (320)
T ss_dssp HHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECSSB--TTBEEEECEEEETTEEEESTTCEEEEECT
T ss_pred HHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcccC--CceEEEEeEEEECCEEeccCCCcEEEEEC
Confidence 999999999 89999999974 78999999875 45789999999876 59999999999999988654 46899999
Q ss_pred cccceeecHHHHHHHHHHHhc
Q 021951 284 GSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 284 GTs~~~lp~~~~~~l~~~~~~ 304 (305)
||++++||+++|++|.+++++
T Consensus 215 Gtt~~~lP~~~~~~i~~~~~~ 235 (320)
T 4aa9_A 215 GTSVLFGPSSDILKIQMAIGA 235 (320)
T ss_dssp TCSSEEEEHHHHHHHHHHTTC
T ss_pred CCCcEECCHHHHHHHHHHhCC
Confidence 999999999999999999864
No 16
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=3.1e-42 Score=317.45 Aligned_cols=218 Identities=22% Similarity=0.422 Sum_probs=183.4
Q ss_pred EEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCC--CCCCCCCCCCCCCCCCCCCcccccCcCCCCC
Q 021951 56 FQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVR--CVEAPHPLYRPSNDLVPCEDPICASLHAPGH 133 (305)
Q Consensus 56 ~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~~--C~~~~~~~y~p~~S~v~c~s~~C~~~~~~~~ 133 (305)
+||. +.+.+|+++|.||||+|++.|+|||||+++||+|. .|.. |. .++.|+|++|+ +++.
T Consensus 5 ~~l~---~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~~------ 66 (329)
T 1htr_B 5 EPMA---YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSV-YCQSQACT--SHSRFNPSESS------TYST------ 66 (329)
T ss_dssp CGGG---GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGCT------TCEE------
T ss_pred eeeE---EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC-CCCCcccC--CCCcCCCccCC------CeEE------
Confidence 4554 34789999999999999999999999999999999 9974 76 46889998773 1111
Q ss_pred CCCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCC-CCCCCcceEEecCCCCC------h
Q 021951 134 HNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKS------S 206 (305)
Q Consensus 134 ~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~------s 206 (305)
..|.|.+.|++| ++.|.+++|+|+| |+..+.++.|||++..... +.....+||||||++.+ +
T Consensus 67 ------~~~~~~i~Yg~g-s~~G~~~~D~v~~----g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~ 135 (329)
T 1htr_B 67 ------NGQTFSLQYGSG-SLTGFFGYDTLTV----QSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATT 135 (329)
T ss_dssp ------EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCS
T ss_pred ------CCcEEEEEeCCC-CeEEEEEeeeEEE----cceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCC
Confidence 367999999999 5699999999999 4677889999999876332 33457899999999865 4
Q ss_pred HHHHhhhcccc-ceeeEEeecCCC---cceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEee--eCCCC
Q 021951 207 IVSQLHSQKLI-RNVVGHCLSGGG---GGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTG--LKNLP 278 (305)
Q Consensus 207 ~~~ql~~~~~i-~~~Fs~~L~~~~---~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~--~~~~~ 278 (305)
++.+|.+++++ +++||+||.+.. .|.|+||+.+ ++.+++.|+|+... .+|.|.+++|+|+++.+. .....
T Consensus 136 ~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~~~~ 213 (329)
T 1htr_B 136 AMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQE--LYWQIGIEEFLIGGQASGWCSEGCQ 213 (329)
T ss_dssp HHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSS--SSCEEEECEEEETTEECCTTTTCEE
T ss_pred HHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCC--ceEEEEEeEEEECCceeeecCCCce
Confidence 78899999988 899999998643 7999999875 35689999999876 599999999999998864 23468
Q ss_pred EEEeccccceeecHHHHHHHHHHHhc
Q 021951 279 VVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 279 ~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
+||||||++++||+++|++|.+++.+
T Consensus 214 aiiDSGTt~~~lp~~~~~~l~~~~~~ 239 (329)
T 1htr_B 214 AIVDTGTSLLTVPQQYMSALLQATGA 239 (329)
T ss_dssp EEECTTCCSEEEEGGGHHHHHHHHTC
T ss_pred EEEecCCccEECCHHHHHHHHHHhCC
Confidence 99999999999999999999999865
No 17
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=1.1e-41 Score=314.38 Aligned_cols=218 Identities=21% Similarity=0.297 Sum_probs=182.4
Q ss_pred ceeEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCC-CCCCC-------CCCCCCCCCCCCCCCCCCccc
Q 021951 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDA-PCVRC-------VEAPHPLYRPSNDLVPCEDPI 124 (305)
Q Consensus 53 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~-~C~~C-------~~~~~~~y~p~~S~v~c~s~~ 124 (305)
.+.+||.+. +.+|+++|.||||+|++.|+|||||+++||+|.. +|..| ....++.|+|++|+ +
T Consensus 2 ~~~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~Ss------T 72 (334)
T 1j71_A 2 DVPTTLINE---GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSS------S 72 (334)
T ss_dssp CEEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCT------T
T ss_pred ceeEEEecC---CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCC------C
Confidence 467888764 6789999999999999999999999999998541 35432 11246788887763 1
Q ss_pred ccCcCCCCCCCCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCCCCCCCcceEEecCCCC
Q 021951 125 CASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGK 204 (305)
Q Consensus 125 C~~~~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~ 204 (305)
++. ..|.|.+.|++|+.+.|.+++|+|+|+ +..+.++.|||++.. ...+||||||++.
T Consensus 73 ~~~------------~~~~~~i~Yg~Gs~~~G~~~~D~v~~g----~~~~~~~~fg~~~~~------~~~~GilGLg~~~ 130 (334)
T 1j71_A 73 AQN------------LNQDFSIEYGDLTSSQGSFYKDTVGFG----GISIKNQQFADVTTT------SVDQGIMGIGFTA 130 (334)
T ss_dssp CEE------------EEEEEEEEBTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEE------SSSSCEEECSCGG
T ss_pred ccc------------CCCceEEEECCCCEEEEEEEEEEEEEC----CEEEccEEEEEEEec------CCCccEEEEcCCc
Confidence 111 368999999999889999999999994 567889999999875 2579999999975
Q ss_pred C--------hHHHHhhhcccc-ceeeEEeecC--CCcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEE
Q 021951 205 S--------SIVSQLHSQKLI-RNVVGHCLSG--GGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGET 271 (305)
Q Consensus 205 ~--------s~~~ql~~~~~i-~~~Fs~~L~~--~~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~ 271 (305)
+ +++.+|.++++| +++||+||.+ ...|.|+||+.+ ++.+++.|+|+... .+|.|.+++|.|+++.
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g~~ 208 (334)
T 1j71_A 131 DEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSS--VELRVHLGSINFDGTS 208 (334)
T ss_dssp GSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCS--SSCEEEEEEEEETTEE
T ss_pred ccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCC--CeEEEEEeEEEECCEe
Confidence 4 789999999999 8999999985 468999999764 45789999999877 4999999999999998
Q ss_pred eeeCCCCEEEeccccceeecHHHHHHHHHHHhc
Q 021951 272 TGLKNLPVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 272 ~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
+.. +..+||||||++++||+++|++|.++|.+
T Consensus 209 ~~~-~~~~iiDSGTt~~~lP~~~~~~l~~~~~~ 240 (334)
T 1j71_A 209 VST-NADVVLDSGTTITYFSQSTADKFARIVGA 240 (334)
T ss_dssp EEE-EEEEEECTTCSSEEECHHHHHHHHHHHTC
T ss_pred ccC-CccEEEeCCCCcEecCHHHHHHHHHHcCC
Confidence 764 36799999999999999999999999875
No 18
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.1e-41 Score=315.01 Aligned_cols=222 Identities=18% Similarity=0.293 Sum_probs=187.8
Q ss_pred CceeEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCC----CCCCCCCCCCCCCCCCCCCCcccccC
Q 021951 52 SSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV----RCVEAPHPLYRPSNDLVPCEDPICAS 127 (305)
Q Consensus 52 ~~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~----~C~~~~~~~y~p~~S~v~c~s~~C~~ 127 (305)
....+||.+. .+.+|+++|.||||||++.|+|||||+++||+|. .|. .|. .++.|+|++|. +++.
T Consensus 6 ~~~~~~l~n~--~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~~~C~--~~~~y~~~~Ss------T~~~ 74 (341)
T 3k1w_A 6 TTSSVILTNY--MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACV--YHKLFDASDSS------SYKH 74 (341)
T ss_dssp BCEEEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTCHHHH--TSCCBCGGGCT------TCEE
T ss_pred CCccccceEc--cCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccC-CCCCCCCccc--CCCCCCCCcCc------CeeE
Confidence 5667889864 3889999999999999999999999999999999 898 565 46899998873 1111
Q ss_pred cCCCCCCCCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCC-CCCCCcceEEecCCCCCh
Q 021951 128 LHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS 206 (305)
Q Consensus 128 ~~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~s 206 (305)
..|.|.+.|++| .+.|.+++|+|+| |+..+ ++.|||++..... +.....+||||||++..+
T Consensus 75 ------------~~~~~~i~Yg~g-s~~G~~~~D~v~i----g~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s 136 (341)
T 3k1w_A 75 ------------NGTELTLRYSTG-TVSGFLSQDIITV----GGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQA 136 (341)
T ss_dssp ------------EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGC
T ss_pred ------------CCCEEEEEECCc-EEEEEEEEEEEEE----CCcee-eEEEEEEEEccccccccCCcceEEECCchhhc
Confidence 367999999999 4999999999999 45677 9999999886332 345568999999998654
Q ss_pred ------HHHHhhhcccc-ceeeEEeecCCC------cceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEE
Q 021951 207 ------IVSQLHSQKLI-RNVVGHCLSGGG------GGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGET 271 (305)
Q Consensus 207 ------~~~ql~~~~~i-~~~Fs~~L~~~~------~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~ 271 (305)
++.+|.+++.| +++||+||.+.. .|.|+||+.+ ++.+++.|+|+... .+|.|.+++|+++++.
T Consensus 137 ~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~~i~v~~~~ 214 (341)
T 3k1w_A 137 IGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT--GVWQIQMKGVSVGSST 214 (341)
T ss_dssp GGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSST--TSCEEEECCEEETTEE
T ss_pred ccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCC--CEEEEEEeEEEECCEE
Confidence 78899999999 899999998653 8999999865 45789999999865 6999999999999987
Q ss_pred eee-CCCCEEEeccccceeecHHHHHHHHHHHhc
Q 021951 272 TGL-KNLPVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 272 ~~~-~~~~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
+.. ....+||||||++++||+++|++|.+++.+
T Consensus 215 ~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~ 248 (341)
T 3k1w_A 215 LLCEDGCLALVDTGASYISGSTSSIEKLMEALGA 248 (341)
T ss_dssp EECTTCEEEEECTTCSSEEECHHHHHHHHHHHTC
T ss_pred eecCCCCEEEEECCCChhcCCHHHHHHHHHHcCC
Confidence 544 346899999999999999999999999864
No 19
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=2.7e-41 Score=312.70 Aligned_cols=218 Identities=20% Similarity=0.325 Sum_probs=182.2
Q ss_pred ceeEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCC-CCCCCC-------CCCCCCCCCCCCCCCCCccc
Q 021951 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDA-PCVRCV-------EAPHPLYRPSNDLVPCEDPI 124 (305)
Q Consensus 53 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~-~C~~C~-------~~~~~~y~p~~S~v~c~s~~ 124 (305)
.+.+||.+. +.+|+++|.||||+|++.|+|||||+++||+|.. +|..|. ...++.|+|++|+ +
T Consensus 2 ~v~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~Ss------T 72 (342)
T 2qzx_A 2 PVAVTLHNE---AITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSR------T 72 (342)
T ss_dssp CEEEEEEEC---SSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCT------T
T ss_pred ceeEEEecC---CeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCC------C
Confidence 456788763 6799999999999999999999999999998531 365321 1246788887763 1
Q ss_pred ccCcCCCCCCCCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCCCCCCCcceEEecCCCC
Q 021951 125 CASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGK 204 (305)
Q Consensus 125 C~~~~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~ 204 (305)
++. ..|.|.+.|++|+.+.|.+++|+|+|+ +..+.++.|||++... ..+||||||++.
T Consensus 73 ~~~------------~~~~~~i~Yg~Gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~------~~~GilGLg~~~ 130 (342)
T 2qzx_A 73 SQN------------LNTRFDIKYGDGSYAKGKLYKDTVGIG----GVSVRDQLFANVWSTS------ARKGILGIGFQS 130 (342)
T ss_dssp CEE------------EEEEEEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEEC------SSSCEEECSCGG
T ss_pred ccc------------CCCcEEEEeCCCCeEEEEEEEEEEEEC----CEEecceEEEEEEecC------CCcCEEEEcccc
Confidence 111 368999999999889999999999994 5678899999998752 579999999975
Q ss_pred C--------hHHHHhhhcccc-ceeeEEeecC--CCcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEE
Q 021951 205 S--------SIVSQLHSQKLI-RNVVGHCLSG--GGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGET 271 (305)
Q Consensus 205 ~--------s~~~ql~~~~~i-~~~Fs~~L~~--~~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~ 271 (305)
. +++.+|.++++| +++||+||.+ ...|.|+||+.+ ++.+++.|+|+... .+|.|.+++|+|+++.
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g~~ 208 (342)
T 2qzx_A 131 GEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSE--KKLTVGLRSVNVRGRN 208 (342)
T ss_dssp GCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS--SSCEEEEEEEEETTEE
T ss_pred ccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCC--ceEEEEEeEEEECCEe
Confidence 4 789999999999 7999999985 468999999754 56799999999887 4999999999999998
Q ss_pred eeeCCCCEEEeccccceeecHHHHHHHHHHHhc
Q 021951 272 TGLKNLPVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 272 ~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
+.. +..+||||||++++||+++|++|.++|.+
T Consensus 209 ~~~-~~~aiiDSGTt~~~lP~~~~~~l~~~~~~ 240 (342)
T 2qzx_A 209 VDA-NTNVLLDSGTTISYFTRSIVRNILYAIGA 240 (342)
T ss_dssp EEE-EEEEEECTTCSSEEECHHHHHHHHHHHTC
T ss_pred cCC-CcCEEEeCCCCCEEcCHHHHHHHHHHhCC
Confidence 764 36799999999999999999999999875
No 20
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=6e-41 Score=309.87 Aligned_cols=215 Identities=20% Similarity=0.291 Sum_probs=184.6
Q ss_pred ceeEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEe-----cCCCCCCCCCCCCCCCCCCCCCCCCCcccccC
Q 021951 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQ-----CDAPCVRCVEAPHPLYRPSNDLVPCEDPICAS 127 (305)
Q Consensus 53 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~-----~~~~C~~C~~~~~~~y~p~~S~v~c~s~~C~~ 127 (305)
++.+||..+ +.+|+++|.||||||++.|+|||||+++||+ |. .|..|. .++.|+|++|. +.+.
T Consensus 2 ~i~~~l~~~---~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~-~~~~C~--~~~~y~~~~Ss------T~~~ 69 (339)
T 3fv3_A 2 SISLSLINE---GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCG-KGVDCK--SSGTFTPSSSS------SYKN 69 (339)
T ss_dssp CEEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEEC-TTCCTT--TTCCBCGGGCT------TCEE
T ss_pred ceeeEEEcC---CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCC-CCCCCC--CCCcCCCccCc------ceee
Confidence 467889764 5689999999999999999999999999998 66 566777 46899998873 1111
Q ss_pred cCCCCCCCCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCCCCCCCcceEEecCCCCCh-
Q 021951 128 LHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKSS- 206 (305)
Q Consensus 128 ~~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~s- 206 (305)
..|.|.+.|++|+.+.|.+++|+|+| |+..++++.|||++... ..+||||||++.++
T Consensus 70 ------------~~~~~~i~Yg~gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~------~~~GilGLg~~~~~~ 127 (339)
T 3fv3_A 70 ------------LGAAFTIRYGDGSTSQGTWGKDTVTI----NGVSITGQQIADVTQTS------VDQGILGIGYTSNEA 127 (339)
T ss_dssp ------------EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEES------SSSCEEECSCGGGCC
T ss_pred ------------CCceEEEEECCCceEEEEEEEEEEEE----CCEEECceEEEEEEecC------CCceeEEecCccccc
Confidence 36799999999999999999999999 46778899999998862 26999999997543
Q ss_pred ---------------HHHHhhhcccc-ceeeEEeecCC--CcceEEECCC--CCCCCCcEEEEcccCCCcceeeEeeEEE
Q 021951 207 ---------------IVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDD--LYDSSRVVWTSMSSDYTKYYSPGVAELF 266 (305)
Q Consensus 207 ---------------~~~ql~~~~~i-~~~Fs~~L~~~--~~G~l~fG~~--~~~~g~~~~~pl~~~~~~~y~v~l~~i~ 266 (305)
++.+|.++++| +++||+||.+. ..|.|+||+. .++.+++.|+|+... .+|.|.+++|.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~ 205 (339)
T 3fv3_A 128 VYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSS--QALTISLASVN 205 (339)
T ss_dssp CBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCS--SSCEEEEEEEE
T ss_pred cccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccC--ccEEEEEEEEE
Confidence 88999999999 89999999853 4899999965 457899999999887 49999999999
Q ss_pred ECCEEeeeCCCCEEEeccccceeecHHHHHHHHHHHhc
Q 021951 267 FGGETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 267 v~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
++++.+... ..+||||||++++||+++|++|.++|.+
T Consensus 206 v~g~~~~~~-~~~iiDSGtt~~~lP~~~~~~i~~~~~~ 242 (339)
T 3fv3_A 206 LKGSSFSFG-DGALLDSGTTLTYFPSDFAAQLADKAGA 242 (339)
T ss_dssp ESSCEEEEE-EEEEECTTBSSEEECHHHHHHHHHHHTC
T ss_pred ECCEeecCC-ccEEEeCCCCCEecCHHHHHHHHHHcCC
Confidence 999987653 6799999999999999999999999874
No 21
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=3.6e-41 Score=311.64 Aligned_cols=216 Identities=24% Similarity=0.353 Sum_probs=184.3
Q ss_pred ceeEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCC--CC---------CCCCCCCCCCCCCCCCCCCC
Q 021951 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAP--CV---------RCVEAPHPLYRPSNDLVPCE 121 (305)
Q Consensus 53 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~--C~---------~C~~~~~~~y~p~~S~v~c~ 121 (305)
++.+|+... +.+|+++|.||||||++.|+|||||+++||+|. . |. .|. .++.|+|++|.
T Consensus 2 ~v~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~~~C~~~~~~~~~~~C~--~~~~y~~~~Ss---- 71 (342)
T 3pvk_A 2 AVPVTLHNE---QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDV-NVDCQVTYSDQTADFCK--QKGTYDPSGSS---- 71 (342)
T ss_dssp CEEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEE-EEEECCCSTTCCTTGGG--TTCCBCGGGCT----
T ss_pred CcceEEecC---CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcC-CCCCcccccccccCCCC--CCCcCCCccCc----
Confidence 466788754 678999999999999999999999999999865 3 53 454 46789998773
Q ss_pred cccccCcCCCCCCCCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCCCCCCCcceEEecC
Q 021951 122 DPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLG 201 (305)
Q Consensus 122 s~~C~~~~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg 201 (305)
+++. ..|.|.+.|++|+.+.|.+++|+|+| |+..+.++.|||++... ..+||||||
T Consensus 72 --T~~~------------~~~~~~i~Yg~gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~------~~~GilGLg 127 (342)
T 3pvk_A 72 --ASQD------------LNTPFKIGYGDGSSSQGTLYKDTVGF----GGVSIKNQVLADVDSTS------IDQGILGVG 127 (342)
T ss_dssp --TCEE------------EEEEEEEECSSSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEES------SSSCEEECS
T ss_pred --ceee------------cCCeEEEEecCCCeEEEEEEEEEEEE----CCEEecceEEEEEEccC------CCccEEEec
Confidence 1111 35799999999988999999999999 46778899999998762 579999999
Q ss_pred CCC-------ChHHHHhhhcccc-ceeeEEeecC--CCcceEEECCC--CCCCCCcEEEEcccCCCcceeeEeeEEEECC
Q 021951 202 KGK-------SSIVSQLHSQKLI-RNVVGHCLSG--GGGGFLFFGDD--LYDSSRVVWTSMSSDYTKYYSPGVAELFFGG 269 (305)
Q Consensus 202 ~~~-------~s~~~ql~~~~~i-~~~Fs~~L~~--~~~G~l~fG~~--~~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~ 269 (305)
++. .+++.+|.++++| +++||+||.+ ...|.|+||+. .++.+++.|+|+.... +|.|.+++|.+++
T Consensus 128 ~~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~--~~~v~l~~i~v~g 205 (342)
T 3pvk_A 128 YKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSDR--ELRISLGSVEVSG 205 (342)
T ss_dssp CGGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCSS--SCEEEEEEEEETT
T ss_pred CccccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCccc--eEEEEEeEEEECC
Confidence 986 5799999999999 8999999985 35799999965 4567999999998874 9999999999999
Q ss_pred EEeeeCCCCEEEeccccceeecHHHHHHHHHHHhc
Q 021951 270 ETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 270 ~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
+.+...+..+||||||++++||+++|++|.++|.+
T Consensus 206 ~~~~~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~ 240 (342)
T 3pvk_A 206 KTINTDNVDVLLDSGTTITYLQQDLADQIIKAFNG 240 (342)
T ss_dssp EEEEEEEEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred EEecCCCceEEEeCCCCCeecCHHHHHHHHHHcCC
Confidence 99877667899999999999999999999999864
No 22
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1.7e-41 Score=317.78 Aligned_cols=217 Identities=21% Similarity=0.322 Sum_probs=183.5
Q ss_pred ceeEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCC--CCCCCCCCCCCCCCCCCCCCcccccCcCC
Q 021951 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHA 130 (305)
Q Consensus 53 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~--~C~~~~~~~y~p~~S~v~c~s~~C~~~~~ 130 (305)
...+||.+ +.+.+|+++|.||||+|++.|+|||||+++||+|. .|. .|. .++.|+|++|+ ++..
T Consensus 51 ~~~~pl~~--~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~~--- 116 (375)
T 1miq_A 51 NDVIELDD--VANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSK-KCNSSGCS--IKNLYDSSKSK------SYEK--- 116 (375)
T ss_dssp TBCCCGGG--TBCEEEECCCEETTTTEECCEEEETTCCCEEEEBT-TCCSSGGG--GSCCBCGGGCT------TCEE---
T ss_pred cceEEccc--CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccC-CCCccccc--CCCcCCCccCC------ceEE---
Confidence 34577764 34889999999999999999999999999999999 997 565 46899998773 1211
Q ss_pred CCCCCCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeee----cCCCCCCCCcceEEecCCCCC-
Q 021951 131 PGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYN----QVPGASYHPLDGILGLGKGKS- 205 (305)
Q Consensus 131 ~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~----~~~~~~~~~~~GIlGLg~~~~- 205 (305)
..|.|.+.|++|+ +.|.+++|+|+| |+..+.+ .|||++. .. .+.....+||||||++.+
T Consensus 117 ---------~~~~~~i~Yg~Gs-~~G~~~~Dtv~i----g~~~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s 180 (375)
T 1miq_A 117 ---------DGTKVDITYGSGT-VKGFFSKDLVTL----GHLSMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLS 180 (375)
T ss_dssp ---------EEEEEEEEETTEE-EEEEEEEEEEEE----TTEEEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTT
T ss_pred ---------CCcEEEEEeCCCe-EEEEEEEEEEEE----cCceECc-EEEEEEecccccc-ccccCCCceEEeCCCCccc
Confidence 3689999999995 899999999999 4567788 9999988 42 222356899999999865
Q ss_pred -----hHHHHhhhcccc-ceeeEEeecCC--CcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEeeeC
Q 021951 206 -----SIVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLK 275 (305)
Q Consensus 206 -----s~~~ql~~~~~i-~~~Fs~~L~~~--~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~~ 275 (305)
+++.+|.+++++ +++||+||.+. ..|.|+||+.+ ++.+++.|+|+... .+|.|.++ |+|+++.+ .
T Consensus 181 ~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~-i~v~g~~~--~ 255 (375)
T 1miq_A 181 IGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHD--LYWQIDLD-VHFGKQTM--E 255 (375)
T ss_dssp CSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSS--SSSEEEEE-EEETTEEE--E
T ss_pred ccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCC--ceEEEEEE-EEECCEEc--c
Confidence 478899999999 89999999964 48999999875 35789999999865 69999999 99999887 5
Q ss_pred CCCEEEeccccceeecHHHHHHHHHHHhc
Q 021951 276 NLPVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 276 ~~~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
...+||||||++++||+++|++|.+++.+
T Consensus 256 ~~~aiiDSGTs~~~lP~~~~~~l~~~~~~ 284 (375)
T 1miq_A 256 KANVIVDSGTTTITAPSEFLNKFFANLNV 284 (375)
T ss_dssp EEEEEECTTBSSEEECHHHHHHHHHHHTC
T ss_pred cceEEecCCCccEEcCHHHHHHHHHHhCC
Confidence 67899999999999999999999999875
No 23
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=8.3e-41 Score=307.46 Aligned_cols=211 Identities=20% Similarity=0.297 Sum_probs=179.8
Q ss_pred CCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcCCCCCCCCCCCCCce
Q 021951 64 PTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCD 143 (305)
Q Consensus 64 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~~C~~~~~~~y~p~~S~v~c~s~~C~~~~~~~~~~c~~~~~~~ 143 (305)
.+.+|+++|.|| +|++.|+|||||+++||+|. +|..|..+.++.|+|++|+ + + ...|.
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss--~-----~------------~~~~~ 69 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSD-ELPSSEQTGHDLYTPSSSA--T-----K------------LSGYS 69 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECT-TSCHHHHTTSCCCBCCSSC--E-----E------------CTTCB
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeC-CCCccccCCCCCCCchhcC--C-----c------------cCCCE
Confidence 377999999999 89999999999999999999 9998876778999998874 1 1 13679
Q ss_pred eEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCCC-CCCCcceEEecCCCCCh---------HHHHhhh
Q 021951 144 YELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGA-SYHPLDGILGLGKGKSS---------IVSQLHS 213 (305)
Q Consensus 144 ~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~~-~~~~~~GIlGLg~~~~s---------~~~ql~~ 213 (305)
|.+.|++|+.+.|.+++|+|+| |+..+.++.|||++.....+ .....+||||||++.++ ++++|.+
T Consensus 70 ~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~ 145 (325)
T 1ibq_A 70 WDISYGDGSSASGDVYRDTVTV----GGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKS 145 (325)
T ss_dssp EEEECSSSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGG
T ss_pred EEEEeCCCCEEEEEEEEeEEEE----CCEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHH
Confidence 9999999977999999999999 45778899999998763222 22578999999997544 6789987
Q ss_pred ccccceeeEEeecCCCcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEeeeCCCCEEEeccccceeec
Q 021951 214 QKLIRNVVGHCLSGGGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLN 291 (305)
Q Consensus 214 ~~~i~~~Fs~~L~~~~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTs~~~lp 291 (305)
+ +.+++||+||.++..|.|+||+.+ ++.+++.|+|+.... .+|.|.+++|+|+++.+......+||||||++++||
T Consensus 146 ~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~-~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP 223 (325)
T 1ibq_A 146 Q-LDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITYTDADSSQ-GYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLD 223 (325)
T ss_dssp G-SSSSEEEEEEETTEEEEEEESSCCGGGBSSCCEEEECBCTT-SSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEEC
T ss_pred h-cCCcEEEEEecCCCCceEEECCcChhhccCceEEEEcCCCC-ceEEEEECcEEECCeeccCCCceEEEeCCCCcEeCC
Confidence 6 238999999998778999999875 467999999998544 799999999999998775456789999999999999
Q ss_pred HHHHHHHHHHH
Q 021951 292 RVTYQTLTSIV 302 (305)
Q Consensus 292 ~~~~~~l~~~~ 302 (305)
+++|++|.++|
T Consensus 224 ~~~~~~i~~~i 234 (325)
T 1ibq_A 224 DEIVSAYYEQV 234 (325)
T ss_dssp HHHHHHHHTTS
T ss_pred HHHHHHHHHhC
Confidence 99999999988
No 24
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=4.9e-41 Score=323.45 Aligned_cols=222 Identities=19% Similarity=0.310 Sum_probs=185.3
Q ss_pred ceeEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCC---CCCCCCCCCCCCCCCCCCCCcccccCcC
Q 021951 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV---RCVEAPHPLYRPSNDLVPCEDPICASLH 129 (305)
Q Consensus 53 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~---~C~~~~~~~y~p~~S~v~c~s~~C~~~~ 129 (305)
...+||.+. .+.+|+++|.||||||++.|+|||||+++||+|. .|. .|.. ++.|+|++|+ +++.
T Consensus 41 ~~~~~l~n~--~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~-~C~~~~~C~~--~~~y~~~~Ss------T~~~-- 107 (478)
T 1qdm_A 41 GDIVALKNY--MNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSA-KCYFSIACYL--HSRYKAGASS------TYKK-- 107 (478)
T ss_dssp SCSGGGCCG--GGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCSCGGGGG--SCCBCGGGCT------TCBC--
T ss_pred CceEEeEec--cCCEEEEEEEECCCCeEEEEEEcCCCcceEEecC-CCCCCccccC--CCCCCcccCC------Ceee--
Confidence 455777653 3789999999999999999999999999999999 896 6874 5789998773 1111
Q ss_pred CCCCCCCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCC-CCCCCcceEEecCCCCCh--
Q 021951 130 APGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS-- 206 (305)
Q Consensus 130 ~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~s-- 206 (305)
..|.|.+.|++| +++|.+++|+|+| |+..+.++.|||++..... +.....+||||||++.++
T Consensus 108 ----------~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~ 172 (478)
T 1qdm_A 108 ----------NGKPAAIQYGTG-SIAGYFSEDSVTV----GDLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVG 172 (478)
T ss_dssp ----------CCCEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGG
T ss_pred ----------CCcEEEEEcCCC-CeEEEEEEEEEEE----CCeEECCEEEEEEEecCCcccccccccceecccccccccC
Confidence 367999999999 5899999999999 4567889999999875322 334568999999998765
Q ss_pred ----HHHHhhhcccc-ceeeEEeecCC----CcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEeee-
Q 021951 207 ----IVSQLHSQKLI-RNVVGHCLSGG----GGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGL- 274 (305)
Q Consensus 207 ----~~~ql~~~~~i-~~~Fs~~L~~~----~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~- 274 (305)
++.+|.+++++ +++||+||.+. .+|.|+||+.+ ++.|++.|+|+... ++|+|.+++|.|+++.+.+
T Consensus 173 ~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~--~~w~v~l~~i~v~g~~~~~~ 250 (478)
T 1qdm_A 173 KAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQK--GYWQFDMGDVLVGGKSTGFC 250 (478)
T ss_dssp GCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEE--TTEEEEECCEEETTEECSTT
T ss_pred CCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCC--CeEEEEEeEEEECCEEEeec
Confidence 56789999988 89999999864 47999999875 45689999999876 6999999999999988754
Q ss_pred -CCCCEEEeccccceeecHHHHHHHHHHHhc
Q 021951 275 -KNLPVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 275 -~~~~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
..+.+||||||++++||+++|++|.++|++
T Consensus 251 ~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a 281 (478)
T 1qdm_A 251 AGGCAAIADSGTSLLAGPTAIITEINEKIGA 281 (478)
T ss_dssp TTCEEEEECSSCCSEEECHHHHHHHHHHHTC
T ss_pred CCCceEEEcCCCCceeCCHHHHHHHHHHhCc
Confidence 347899999999999999999999999864
No 25
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=9.6e-41 Score=318.82 Aligned_cols=218 Identities=20% Similarity=0.290 Sum_probs=182.2
Q ss_pred ceeEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCC--CCCCCCCCCCCCCCCCCCCCcccccCcCC
Q 021951 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHA 130 (305)
Q Consensus 53 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~--~C~~~~~~~y~p~~S~v~c~s~~C~~~~~ 130 (305)
...+||.+ +.+.+|+++|.||||||++.|+|||||+++||+|. +|. .|. .++.|+|++|+ ++..
T Consensus 127 ~~~~~L~n--~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~-~C~~~~C~--~~~~ydps~Ss------T~~~--- 192 (453)
T 2bju_A 127 NDNIELVD--FQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSV-KCTTAGCL--TKHLYDSSKSR------TYEK--- 192 (453)
T ss_dssp SEEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSTTGG--GSCCBCGGGCT------TCEE---
T ss_pred CCceeeEe--cCCCEEEEEEEECCCCeEEEEEEECCCcceEEecc-CCCccccC--CCCcCCCccCC------ceeE---
Confidence 35578875 34789999999999999999999999999999999 997 565 56899998773 1111
Q ss_pred CCCCCCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecC--CC-CCCCCcceEEecCCCCC--
Q 021951 131 PGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQV--PG-ASYHPLDGILGLGKGKS-- 205 (305)
Q Consensus 131 ~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~--~~-~~~~~~~GIlGLg~~~~-- 205 (305)
..|.|.+.|++|+ +.|.+++|+|+|+ +..++ +.|||++... .. +.....+||||||++.+
T Consensus 193 ---------~~~~~~i~YgdGs-~~G~~~~Dtv~ig----~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~ 257 (453)
T 2bju_A 193 ---------DGTKVEMNYVSGT-VSGFFSKDLVTVG----NLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSI 257 (453)
T ss_dssp ---------EEEEEEEECSSSE-EEEEEEEEEEEET----TEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGST
T ss_pred ---------CCcEEEEEcCCCC-eEEEEEEEEEEEe----CcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccc
Confidence 3689999999995 8999999999994 56777 9999998863 21 22356899999999754
Q ss_pred ----hHHHHhhhcccc-ceeeEEeecCC--CcceEEECCCCC--CCCCcEEEEcccCCCcceeeEeeEEEECCEEeeeCC
Q 021951 206 ----SIVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKN 276 (305)
Q Consensus 206 ----s~~~ql~~~~~i-~~~Fs~~L~~~--~~G~l~fG~~~~--~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~~~ 276 (305)
+++.+|.+++.+ +++||+||.+. ..|.|+||+.+. +.|++.|+|+... .+|.|.++ |+|+++.. ..
T Consensus 258 ~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~--~~w~V~l~-I~Vgg~~~--~~ 332 (453)
T 2bju_A 258 GSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHD--LYWQITLD-AHVGNIML--EK 332 (453)
T ss_dssp TCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEE--TTEEEEEE-EEETTEEE--EE
T ss_pred cCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCC--ceEEEEEE-EEECcEEe--cc
Confidence 477899999999 89999999864 689999998753 5789999999876 59999999 99999432 56
Q ss_pred CCEEEeccccceeecHHHHHHHHHHHhc
Q 021951 277 LPVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 277 ~~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
..+||||||++++||+++|++|.+++.+
T Consensus 333 ~~aIiDSGTsl~~lP~~~~~~l~~~i~~ 360 (453)
T 2bju_A 333 ANCIVDSGTSAITVPTDFLNKMLQNLDV 360 (453)
T ss_dssp EEEEECTTCCSEEECHHHHHHHTTTSSC
T ss_pred ccEEEcCCCCeEecCHHHHHHHHHHhCC
Confidence 7899999999999999999999988754
No 26
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=9.5e-41 Score=307.74 Aligned_cols=221 Identities=15% Similarity=0.177 Sum_probs=184.7
Q ss_pred ceeEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCC--CCCCCCCCCCCCCCCCCCCCcccccCcCC
Q 021951 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHA 130 (305)
Q Consensus 53 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~--~C~~~~~~~y~p~~S~v~c~s~~C~~~~~ 130 (305)
++..||.+. .+.+|+++|.|| +|++.|+|||||+++||+|. .|. .|....++.|+|++| .+ +.
T Consensus 6 ~~~~~l~n~--~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~~~~~~~y~~~~S--T~-----~~--- 70 (330)
T 1yg9_A 6 PLYKLVHVF--INTQYAGITKIG--NQNFLTVFDSTSCNVVVASQ-ECVGGACVCPNLQKYEKLKP--KY-----IS--- 70 (330)
T ss_dssp CSCSCEEEE--ECTTSEEEEEET--TEEEEEEEETTCCCEEEECT-TCCSGGGGSTTCCCCCCSSC--EE-----EE---
T ss_pred eeEeeeecC--CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecC-CCCCccCcccccCccCCCCC--ce-----EE---
Confidence 444666642 367899999999 89999999999999999999 997 684446789999876 22 11
Q ss_pred CCCCCCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCCCCCCCcceEEecCCCCCh----
Q 021951 131 PGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKSS---- 206 (305)
Q Consensus 131 ~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~s---- 206 (305)
..+.|.+.|++| ++.|.+++|+|+| |+..+.++.|||++.....+.....+||||||++.++
T Consensus 71 ---------~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~ 136 (330)
T 1yg9_A 71 ---------DGNVQVKFFDTG-SAVGRGIEDSLTI----SQLTTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALK 136 (330)
T ss_dssp ---------EEEEEEEETTTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTS
T ss_pred ---------CCCEEEEEECCc-eEEEEEEEEEEEE----CCEEEcCeEEEEEEEcccccccccCceEEEcCcchhccccC
Confidence 356899999999 5699999999999 4577889999999886222334568999999998766
Q ss_pred ---HHHHhhhccccceeeEEeecCC--C--cceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEeeeCCC
Q 021951 207 ---IVSQLHSQKLIRNVVGHCLSGG--G--GGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNL 277 (305)
Q Consensus 207 ---~~~ql~~~~~i~~~Fs~~L~~~--~--~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~~~~ 277 (305)
++++|.++++++++||+||.+. . .|.|+||+.+ ++.+++.|+|+... .+|.|.+++|+|+++.+...+.
T Consensus 137 ~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~~i~v~~~~~~~~~~ 214 (330)
T 1yg9_A 137 GKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGD--DSWKFRLDGVKIGDTTVAPAGT 214 (330)
T ss_dssp CCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCT--TSCCEECSEEEETTEEEECTTC
T ss_pred CCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCC--CEEEEEeCeEEECCEEEcCCCc
Confidence 8899999997899999999854 2 7999999875 45789999999865 6999999999999988764568
Q ss_pred CEEEeccccceeecHHHHHHHHHHHhc
Q 021951 278 PVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 278 ~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
.+||||||++++||+++|++|.+++++
T Consensus 215 ~aiiDSGTs~~~lP~~~~~~l~~~~~~ 241 (330)
T 1yg9_A 215 QAIIDTSKAIIVGPKAYVNPINEAIGC 241 (330)
T ss_dssp EEEECTTCSSEEEEHHHHHHHHHHHTC
T ss_pred EEEEecCCccccCCHHHHHHHHHHhCC
Confidence 899999999999999999999999865
No 27
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=7.8e-41 Score=307.44 Aligned_cols=210 Identities=18% Similarity=0.268 Sum_probs=177.5
Q ss_pred CeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcCCCCCCCCCCCCCcee
Q 021951 65 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDY 144 (305)
Q Consensus 65 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~~C~~~~~~~y~p~~S~v~c~s~~C~~~~~~~~~~c~~~~~~~~ 144 (305)
+.+|+++|.|| +|++.|+|||||+++||+|. +|..|..+.++.|+|++|+ +. .+.|.|
T Consensus 14 ~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss--~~-----------------~~~~~~ 71 (323)
T 1izd_A 14 DEEYITQVTVG--DDTLGLDFDTGSADLWVFSS-QTPSSERSGHDYYTPGSSA--QK-----------------IDGATW 71 (323)
T ss_dssp GCCEEEEEEET--TEEEEEEEETTCCCEEECBT-TSCHHHHTTCCCBCCCTTC--EE-----------------EEEEEE
T ss_pred CCEEEEEEEEC--CEEEEEEEcCCCcceEEecC-CCCcccccCCCCCCccccC--Cc-----------------cCCCeE
Confidence 67899999999 79999999999999999999 9998776678899998874 11 036799
Q ss_pred EeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCCC-CCCCcceEEecCCCCCh---------HHHHhhhc
Q 021951 145 ELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGA-SYHPLDGILGLGKGKSS---------IVSQLHSQ 214 (305)
Q Consensus 145 ~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~~-~~~~~~GIlGLg~~~~s---------~~~ql~~~ 214 (305)
.+.|++|+.+.|.+++|+|+| |+..++++.|||++.....+ .....+||||||++.++ ++++|.++
T Consensus 72 ~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~ 147 (323)
T 1izd_A 72 SISYGDGSSASGDVYKDKVTV----GGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS 147 (323)
T ss_dssp EEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG
T ss_pred EEEcCCCCeEEEEEEEEEEEE----CCEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh
Confidence 999999977999999999999 45778899999998763221 12468999999997543 67888876
Q ss_pred cccceeeEEeecCCCcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEeeeCCCCEEEeccccceeecH
Q 021951 215 KLIRNVVGHCLSGGGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNR 292 (305)
Q Consensus 215 ~~i~~~Fs~~L~~~~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTs~~~lp~ 292 (305)
+.+++||+||.++..|.|+||+.+ ++.+++.|+|+.... .+|.|.+++|+|++ .+...+..+||||||++++||+
T Consensus 148 -i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~-~~w~v~l~~i~v~~-~~~~~~~~aiiDSGTs~~~lp~ 224 (323)
T 1izd_A 148 -LSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDNSQ-GFWGFTADGYSIGS-DSSSDSITGIADTGTTLLLLDD 224 (323)
T ss_dssp -SSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBCTT-SSCEEEESEEEETT-EEECCCEEEEECTTCCSEEECH
T ss_pred -ccCcEEEEEccCCCCCEEEECCcCccccccceEEEECCCCC-ceEEEEECeEEECC-cccCCCceEEEeCCCcceeCCH
Confidence 338999999998778999999875 456899999998544 79999999999999 6654567899999999999999
Q ss_pred HHHHHHHHHHh
Q 021951 293 VTYQTLTSIVK 303 (305)
Q Consensus 293 ~~~~~l~~~~~ 303 (305)
++|++|.++|.
T Consensus 225 ~~~~~i~~~i~ 235 (323)
T 1izd_A 225 SIVDAYYEQVN 235 (323)
T ss_dssp HHHHHHHTTST
T ss_pred HHHHHHHHhCC
Confidence 99999999874
No 28
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.8e-40 Score=304.93 Aligned_cols=208 Identities=20% Similarity=0.264 Sum_probs=176.0
Q ss_pred CeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcCCCCCCCCCCCCCcee
Q 021951 65 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDY 144 (305)
Q Consensus 65 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~~C~~~~~~~y~p~~S~v~c~s~~C~~~~~~~~~~c~~~~~~~~ 144 (305)
+.+|+++|.|| +|++.|+|||||+++||+|. +|..|..+.++.|+|++|+ .. ...|.|
T Consensus 14 ~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss--~~-----------------~~~~~~ 71 (323)
T 1bxo_A 14 DEEYITPVTIG--GTTLNLNFDTGSADLWVFST-ELPASQQSGHSVYNPSATG--KE-----------------LSGYTW 71 (323)
T ss_dssp GSCEEEEEEET--TEEEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCHHHHC--EE-----------------EEEEEE
T ss_pred CCEEEEEEEEC--CEEEEEEEeCCCcceEEecC-CCCchhccCCCCCCcccCC--cc-----------------cCCCeE
Confidence 67899999999 89999999999999999999 9998876778999998773 10 036899
Q ss_pred EeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCCC-CCCCcceEEecCCCCC---------hHHHHhhhc
Q 021951 145 ELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGA-SYHPLDGILGLGKGKS---------SIVSQLHSQ 214 (305)
Q Consensus 145 ~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~~-~~~~~~GIlGLg~~~~---------s~~~ql~~~ 214 (305)
.+.|++|+.+.|.+++|+|+| |+..+.++.|||++.....+ .....+||||||++.+ +++++|.++
T Consensus 72 ~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~ 147 (323)
T 1bxo_A 72 SISYGDGSSASGNVFTDSVTV----GGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS 147 (323)
T ss_dssp EEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG
T ss_pred EEEeCCCCeEEEEEEEEEEEE----CCEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh
Confidence 999999977999999999999 45678899999998763222 2256899999998743 467888876
Q ss_pred cccceeeEEeecCCCcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEeeeCCCCEEEeccccceeecH
Q 021951 215 KLIRNVVGHCLSGGGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNR 292 (305)
Q Consensus 215 ~~i~~~Fs~~L~~~~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTs~~~lp~ 292 (305)
+.+++||+||.++..|.|+||+.+ ++.+++.|+|+.... .+|.|.+++|+|++ +...+..+||||||++++||+
T Consensus 148 -i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~-~~w~v~l~~i~v~~--~~~~~~~aiiDSGTs~~~lP~ 223 (323)
T 1bxo_A 148 -LAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDNSQ-GFWSFNVDSYTAGS--QSGDGFSGIADTGTTLLLLDD 223 (323)
T ss_dssp -BSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBCTT-SSCEEEEEEEEETT--EEEEEEEEEECTTCSSEEECH
T ss_pred -cCCcEEEEEEeCCCCceEEEeCcChhhccCceEEEECCCCC-CeEEEEEeeEEECC--ccCCCceEEEeCCCCceeCCH
Confidence 238999999997778999999875 468999999998554 79999999999999 333457899999999999999
Q ss_pred HHHHHHHHHH
Q 021951 293 VTYQTLTSIV 302 (305)
Q Consensus 293 ~~~~~l~~~~ 302 (305)
++|++|.++|
T Consensus 224 ~~~~~l~~~i 233 (323)
T 1bxo_A 224 SVVSQYYSQV 233 (323)
T ss_dssp HHHHHHHTTS
T ss_pred HHHHHHHHhC
Confidence 9999999987
No 29
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=303.07 Aligned_cols=218 Identities=22% Similarity=0.301 Sum_probs=174.5
Q ss_pred EEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcCCCCCCCC
Q 021951 57 QVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNC 136 (305)
Q Consensus 57 pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~~C~~~~~~~y~p~~S~v~c~s~~C~~~~~~~~~~c 136 (305)
+|.+.. +..|+++|.||||+|++.|+|||||+++||+|. +|..|. +.|+|++|+ +++.
T Consensus 6 ~l~~~~--~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c~~~~----~~f~~~~Ss------T~~~--------- 63 (383)
T 2ewy_A 6 NLQGDS--GRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGT-PHSYID----TYFDTERSS------TYRS--------- 63 (383)
T ss_dssp CEEEET--TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CBTTBS----CCCCGGGCT------TCEE---------
T ss_pred eccCCC--CCcEEEEEEecCCCceEEEEEecCCCceEEecC-CCCccc----cCcccccCc------ccee---------
Confidence 345443 668999999999999999999999999999999 887764 789998873 1111
Q ss_pred CCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCCC-CCCCcceEEecCCCCC--------hH
Q 021951 137 EDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGA-SYHPLDGILGLGKGKS--------SI 207 (305)
Q Consensus 137 ~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~~-~~~~~~GIlGLg~~~~--------s~ 207 (305)
..|.|.+.|++| ++.|.+++|+|+|+. +......+.|+|+......+ .....+||||||++.+ ++
T Consensus 64 ---~~~~~~i~Yg~G-s~~G~~~~Dtv~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~ 137 (383)
T 2ewy_A 64 ---KGFDVTVKYTQG-SWTGFVGEDLVTIPK--GFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETF 137 (383)
T ss_dssp ---EEEEEEEECSSC-EEEEEEEEEEEEETT--TEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCH
T ss_pred ---CCceEEEEECCc-EEEEEEEEEEEEECC--CccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCH
Confidence 357999999999 579999999999952 11112246788876543322 2346899999998754 46
Q ss_pred HHHhhhccccceeeEEeecC---------CCcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEeeeC-
Q 021951 208 VSQLHSQKLIRNVVGHCLSG---------GGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLK- 275 (305)
Q Consensus 208 ~~ql~~~~~i~~~Fs~~L~~---------~~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~~- 275 (305)
+.+|.+++.++++||+||.. ...|.|+||+.+ ++.+++.|+|+... .+|.|.+++|+|+++.+.++
T Consensus 138 ~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g~~~~~~~ 215 (383)
T 2ewy_A 138 FDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEE--WYYQIEILKLEIGGQSLNLDC 215 (383)
T ss_dssp HHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSB--TTBBCCEEEEEETTEECCCCT
T ss_pred HHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCC--ceEEEEEEEEEECCEEccccc
Confidence 77888888778899999852 357999999865 46899999999876 59999999999999987643
Q ss_pred ----CCCEEEeccccceeecHHHHHHHHHHHhc
Q 021951 276 ----NLPVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 276 ----~~~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
...+||||||++++||+++|++|.++|.+
T Consensus 216 ~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~ 248 (383)
T 2ewy_A 216 REYNADKAIVDSGTTLLRLPQKVFDAVVEAVAR 248 (383)
T ss_dssp TTTTSSCEEECTTCSSEEEEHHHHHHHHHHHHH
T ss_pred cccCCccEEEEcCCccccCCHHHHHHHHHHHhh
Confidence 36899999999999999999999999875
No 30
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=4.5e-40 Score=314.34 Aligned_cols=217 Identities=17% Similarity=0.244 Sum_probs=181.2
Q ss_pred ceeEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCC--CCCCCCCCCCCCCCCCCCCCcccccCcCC
Q 021951 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHA 130 (305)
Q Consensus 53 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~--~C~~~~~~~y~p~~S~v~c~s~~C~~~~~ 130 (305)
...+||.+ +.+.+|+++|.||||||++.|++||||+++||+|. .|. .|. .++.|+|++|+ ++..
T Consensus 126 ~~~~pL~n--~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~-~C~s~~C~--~~~~ydps~Ss------T~~~--- 191 (451)
T 3qvc_A 126 FDNVELKD--LANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSI-KCTSESCE--SKNHYDSSKSK------TYEK--- 191 (451)
T ss_dssp -CCCCGGG--GBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBT-TCCSGGGT--TSCCBCGGGCT------TCEE---
T ss_pred CCccceee--cCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC-CCCccccC--CCCCCCCCCCc------cccc---
Confidence 34466754 34889999999999999999999999999999999 894 675 56899998873 1111
Q ss_pred CCCCCCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeee----cCCCCCCCCcceEEecCCCC--
Q 021951 131 PGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYN----QVPGASYHPLDGILGLGKGK-- 204 (305)
Q Consensus 131 ~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~----~~~~~~~~~~~GIlGLg~~~-- 204 (305)
..|.|.+.|++|+ +.|.+++|+|+| |+..++ +.|||++. ... +.....+||||||++.
T Consensus 192 ---------~~~~f~i~YgdGs-~~G~~~~Dtv~i----gg~~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s 255 (451)
T 3qvc_A 192 ---------DDTPVKLTSKAGT-ISGIFSKDLVTI----GKLSVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLS 255 (451)
T ss_dssp ---------EEEEEEEECSSEE-EEEEEEEEEEEE----TTEEEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSS
T ss_pred ---------CCCEEEEEECCCE-EEEEEEEEEEEE----CCEEEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCccc
Confidence 3679999999995 999999999999 456778 99999987 422 3345689999999875
Q ss_pred ----ChHHHHhhhcccc-ceeeEEeecCC--CcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEeeeC
Q 021951 205 ----SSIVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLK 275 (305)
Q Consensus 205 ----~s~~~ql~~~~~i-~~~Fs~~L~~~--~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~~ 275 (305)
.+++.+|.+++.| +++||+||.+. ..|.|+||+.+ ++.|++.|+|+... .+|.|.++ |.|++. ...
T Consensus 256 ~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~--~~w~v~l~-I~Vgg~--~~~ 330 (451)
T 3qvc_A 256 IGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHD--LMWQVDLD-VHFGNV--SSK 330 (451)
T ss_dssp SSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSST--TSSEEEEE-EEETTE--EEE
T ss_pred ccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccC--CeeEEEEE-EEECCc--cCC
Confidence 3588999999999 89999999964 47999999875 45789999999965 69999999 999998 334
Q ss_pred CCCEEEeccccceeecHHHHHHHHHHHhc
Q 021951 276 NLPVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 276 ~~~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
...+||||||++++||++++++|.+++++
T Consensus 331 ~~~aiiDSGTt~i~lP~~~~~~i~~~i~a 359 (451)
T 3qvc_A 331 KANVILDSATSVITVPTEFFNQFVESASV 359 (451)
T ss_dssp EEEEEECTTBSSEEECHHHHHHHHTTTTC
T ss_pred CceEEEeCCCccccCCHHHHHHHHHHcCC
Confidence 57899999999999999999999998864
No 31
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=7.7e-39 Score=296.01 Aligned_cols=206 Identities=23% Similarity=0.361 Sum_probs=173.7
Q ss_pred eEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcCCCCCC
Q 021951 55 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHH 134 (305)
Q Consensus 55 ~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~~C~~~~~~~y~p~~S~v~c~s~~C~~~~~~~~~ 134 (305)
.+||.+. +.+|+++|.||||+|++.|+|||||+++||+|. +.|+|++|..
T Consensus 4 ~~~l~n~---~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~---------------- 53 (340)
T 1wkr_A 4 SVPATNQ---LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSS---------------- 53 (340)
T ss_dssp EEEEEEC---SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCE----------------
T ss_pred cEeeecc---CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCcc----------------
Confidence 4677653 568999999999999999999999999999876 5799977631
Q ss_pred CCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEEeeeecCCCCCCCCcceEEecCCCCC---------
Q 021951 135 NCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKS--------- 205 (305)
Q Consensus 135 ~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~--------- 205 (305)
...|.|.+.|++| +++|.+++|+|+| |+..+.++.|||++... .+ ...+||||||++.+
T Consensus 54 ----~~~~~~~i~Yg~G-s~~G~~~~Dtv~~----g~~~v~~~~fg~~~~~~-~~--~~~~GilGLg~~~~s~~~~~~~~ 121 (340)
T 1wkr_A 54 ----ATSDKVSVTYGSG-SFSGTEYTDTVTL----GSLTIPKQSIGVASRDS-GF--DGVDGILGVGPVDLTVGTLSPHT 121 (340)
T ss_dssp ----EEEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEEE-SC--TTCSEEEECSCGGGGTTSEESCT
T ss_pred ----ccCceEEEEECCc-EEEEEEEEEEEEE----CCEEEcceEEEEEEccC-CC--cCCCcEEECCccccccccccccc
Confidence 1367999999999 4899999999999 45778999999998863 22 36899999998754
Q ss_pred -----hHHHHhhhcccc-ceeeEEeecCC-----CcceEEECCCC--CCCCCcEEEEcccCCC--cceeeEeeEEEECC-
Q 021951 206 -----SIVSQLHSQKLI-RNVVGHCLSGG-----GGGFLFFGDDL--YDSSRVVWTSMSSDYT--KYYSPGVAELFFGG- 269 (305)
Q Consensus 206 -----s~~~ql~~~~~i-~~~Fs~~L~~~-----~~G~l~fG~~~--~~~g~~~~~pl~~~~~--~~y~v~l~~i~v~~- 269 (305)
+++.+|.++++| +++||+||.+. ..|.|+||+.+ ++.+++.|+|++.... .+|.|. .+|.|++
T Consensus 122 ~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~ 200 (340)
T 1wkr_A 122 STSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSS 200 (340)
T ss_dssp TCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTT
T ss_pred cccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCC
Confidence 457889999999 79999999852 47999999875 4689999999998521 799999 9999998
Q ss_pred EEeeeCCCCEEEeccccceeecHHHHHHHHHHHhc
Q 021951 270 ETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 270 ~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
+.+.. +..+||||||++++||+++|++|.+++++
T Consensus 201 ~~l~~-~~~aiiDSGTt~~~lP~~~~~~l~~~~~a 234 (340)
T 1wkr_A 201 TSILS-STAGIVDTGTTLTLIASDAFAKYKKATGA 234 (340)
T ss_dssp EEEEE-EEEEEECTTBCSEEECHHHHHHHHHHHTC
T ss_pred eEccC-CCeEEEeCCcccccCCHHHHHHHHHhhCC
Confidence 77643 46899999999999999999999998864
No 32
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=9.8e-39 Score=301.07 Aligned_cols=219 Identities=19% Similarity=0.220 Sum_probs=176.3
Q ss_pred eEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcCCCCCC
Q 021951 55 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHH 134 (305)
Q Consensus 55 ~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~~C~~~~~~~y~p~~S~v~c~s~~C~~~~~~~~~ 134 (305)
.-+|.++. +.+|+++|.||||+|++.|+|||||+++||+|. +|..| ++.|+|++|+ +++.
T Consensus 12 ~~~l~~~~--~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~c~~~----~~~y~~~~Ss------T~~~------- 71 (395)
T 2qp8_A 12 VDNLRGKS--GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PHPFL----HRYYQRQLSS------TYRD------- 71 (395)
T ss_dssp TTCEEEET--TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CCTTC----SCCCCGGGCT------TCEE-------
T ss_pred eeecCCCC--CceEEEEEEecCCCceEEEEEecCCCceEEECC-CCccc----cCCcCcccCC------Ccee-------
Confidence 34455543 678999999999999999999999999999998 88765 4789998873 1111
Q ss_pred CCCCCCCceeEeeeCCCCeEEEEEEEEEEEEeecCCCcCCC-ceEEEeeeecCCCCC-CCCcceEEecCCCCC-------
Q 021951 135 NCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNP-RLALGCGYNQVPGAS-YHPLDGILGLGKGKS------- 205 (305)
Q Consensus 135 ~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~-~~~Fg~~~~~~~~~~-~~~~~GIlGLg~~~~------- 205 (305)
..|.|.+.|++| +++|.+++|+|+|+. +..+. .+.|+++......+. ....+||||||++.+
T Consensus 72 -----~~~~~~i~Yg~G-s~~G~~~~Dtv~ig~---g~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~ 142 (395)
T 2qp8_A 72 -----LRKGVYVPYTQG-KWEGELGTDLVSIPH---GPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSL 142 (395)
T ss_dssp -----EEEEEEEECSSC-EEEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTS
T ss_pred -----CCceEEEEECCc-EEEEEEEeEEEEECC---CCCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCC
Confidence 357999999999 569999999999952 22332 367888765423222 356899999998754
Q ss_pred -hHHHHhhhccccceeeEEeecC------------CCcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCE
Q 021951 206 -SIVSQLHSQKLIRNVVGHCLSG------------GGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGE 270 (305)
Q Consensus 206 -s~~~ql~~~~~i~~~Fs~~L~~------------~~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~ 270 (305)
+++.+|.+++.++++||+||.+ ...|.|+||+.+ ++.+++.|+|+... .+|.|.+++|+|+++
T Consensus 143 ~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g~ 220 (395)
T 2qp8_A 143 EPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE--WYYEVIIVRVEINGQ 220 (395)
T ss_dssp CCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB--TTBBCCEEEEEETTE
T ss_pred CCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCC--ceEEEEEEEEEECCE
Confidence 4778999999888899999964 257999999875 45789999999876 599999999999999
Q ss_pred EeeeC-----CCCEEEeccccceeecHHHHHHHHHHHhc
Q 021951 271 TTGLK-----NLPVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 271 ~~~~~-----~~~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
.+.++ ...+||||||++++||+++|++|.++|.+
T Consensus 221 ~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~ 259 (395)
T 2qp8_A 221 DLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKA 259 (395)
T ss_dssp ECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHH
T ss_pred EcccCccccCCceEEEEcCCCcEecCHHHHHHHHHHHhh
Confidence 87542 36899999999999999999999999874
No 33
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=3.4e-38 Score=302.56 Aligned_cols=211 Identities=19% Similarity=0.223 Sum_probs=173.9
Q ss_pred CeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcCCCCCCCCCCCCCcee
Q 021951 65 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDY 144 (305)
Q Consensus 65 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~~C~~~~~~~y~p~~S~v~c~s~~C~~~~~~~~~~c~~~~~~~~ 144 (305)
+..|+++|.||||+|++.|+|||||+++||+|. +| |. .++.|+|++|. +++. ..|.|
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~-~c--c~--~~~~y~~~~Ss------T~~~------------~~~~~ 129 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PH--PF--LHRYYQRQLSS------TYRD------------LRKGV 129 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CC--TT--CSCCCCGGGCT------TCEE------------EEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEecc-cc--cc--cCCcccCCCCC------Cccc------------CCccE
Confidence 568999999999999999999999999999998 78 43 46889998873 1111 35799
Q ss_pred EeeeCCCCeEEEEEEEEEEEEeecCCCcCC-CceEEEeeeecCCCC-CCCCcceEEecCCCC--------ChHHHHhhhc
Q 021951 145 ELEYADGGSSLGVLVKDAFAFNYTNGQRLN-PRLALGCGYNQVPGA-SYHPLDGILGLGKGK--------SSIVSQLHSQ 214 (305)
Q Consensus 145 ~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~-~~~~Fg~~~~~~~~~-~~~~~~GIlGLg~~~--------~s~~~ql~~~ 214 (305)
.+.|++| .+.|.+++|+|+|++ ...+ ..+.|+|+......+ .....+||||||++. .+++.+|.++
T Consensus 130 ~i~Yg~G-s~~G~~~~Dtv~ig~---~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q 205 (455)
T 3lpj_A 130 YVPYTQG-KWEGELGTDLVSIPH---GPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQ 205 (455)
T ss_dssp EEECSSC-EEEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHH
T ss_pred EEEeCCe-EEEEEEEEEEEEECC---CcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHc
Confidence 9999999 569999999999952 2222 246789887753333 235789999999874 3578899999
Q ss_pred cccceeeEEeecC------------CCcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEeeeC-----
Q 021951 215 KLIRNVVGHCLSG------------GGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLK----- 275 (305)
Q Consensus 215 ~~i~~~Fs~~L~~------------~~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~~----- 275 (305)
+.|.++||+||.+ ...|.|+||+.+ ++.+++.|+|+... .+|.|.+++|.|+++.+.+.
T Consensus 206 ~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~~i~v~g~~~~~~~~~~~ 283 (455)
T 3lpj_A 206 THVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE--WYYEVIIVRVEINGQDLKMDCKEYN 283 (455)
T ss_dssp SCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB--TTBBCCEEEEEETTEECCCCGGGGG
T ss_pred cCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCC--ceeEEEEeEEEECCEEccccccccC
Confidence 9888899999963 347999999865 46789999999886 59999999999999988653
Q ss_pred CCCEEEeccccceeecHHHHHHHHHHHhc
Q 021951 276 NLPVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 276 ~~~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
...+||||||++++||+++|++|.++|.+
T Consensus 284 ~~~aiiDSGTt~~~lP~~~~~~i~~~i~~ 312 (455)
T 3lpj_A 284 YDKSIVDSGTTNLRLPKKVFEAAVKSIKA 312 (455)
T ss_dssp SSCEEECTTSSSEEEEHHHHHHHHHHHHH
T ss_pred CCeEEEECCCcceeCCHHHHHHHHHHhhh
Confidence 46899999999999999999999999875
No 34
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=9.6e-38 Score=294.89 Aligned_cols=211 Identities=19% Similarity=0.226 Sum_probs=171.5
Q ss_pred CeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCcccccCcCCCCCCCCCCCCCcee
Q 021951 65 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDY 144 (305)
Q Consensus 65 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~~C~~~~~~~y~p~~S~v~c~s~~C~~~~~~~~~~c~~~~~~~~ 144 (305)
+..|+++|.||||+|++.|+|||||+++||+|. +| |. .++.|+|++|+ +++. ..|.|
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c--~~--~~~~y~~~~Ss------T~~~------------~~~~~ 83 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PH--PF--LHRYYQRQLSS------TYRD------------LRKGV 83 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CC--TT--CSCCCCGGGCT------TCEE------------EEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccC-CC--Cc--ccCCcCcccCc------cccc------------CCCEE
Confidence 568999999999999999999999999999998 88 33 45889998873 1111 36799
Q ss_pred EeeeCCCCeEEEEEEEEEEEEeecCCCcCCC-ceEEEeeeecCCCC-CCCCcceEEecCCCC--------ChHHHHhhhc
Q 021951 145 ELEYADGGSSLGVLVKDAFAFNYTNGQRLNP-RLALGCGYNQVPGA-SYHPLDGILGLGKGK--------SSIVSQLHSQ 214 (305)
Q Consensus 145 ~~~Y~~Gs~~~G~~~~D~v~l~~~~g~~~~~-~~~Fg~~~~~~~~~-~~~~~~GIlGLg~~~--------~s~~~ql~~~ 214 (305)
.+.|++| .+.|.+++|+|+|++ ...+. .+.|+|+......+ .....+||||||++. .+++.+|.++
T Consensus 84 ~i~Yg~G-s~~G~~~~D~v~ig~---~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q 159 (402)
T 3vf3_A 84 YVPYTQG-KWEGELGTDLVSIPH---GPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQ 159 (402)
T ss_dssp EEECSSC-EEEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHH
T ss_pred EEEECcE-EEEEEEEEEEEEECC---ccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHc
Confidence 9999999 579999999999952 22333 34588876653332 235789999999874 4578899999
Q ss_pred cccceeeEEeecC------------CCcceEEECCCC--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEeeeC-----
Q 021951 215 KLIRNVVGHCLSG------------GGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLK----- 275 (305)
Q Consensus 215 ~~i~~~Fs~~L~~------------~~~G~l~fG~~~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~~~----- 275 (305)
+.|.++||+||.. ...|.|+||+.+ ++.+++.|+|+... .+|.|.+++|+|+++.+...
T Consensus 160 ~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~~i~v~g~~~~~~~~~~~ 237 (402)
T 3vf3_A 160 THVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE--WYYEVIIVRVEINGQDLKMDCKEYN 237 (402)
T ss_dssp SCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSB--TTBEECEEEEEETTEECCCCGGGGG
T ss_pred cCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcC--cEEEEEEeEEEECCEEecccccccC
Confidence 9888899999962 347999999865 46789999999876 59999999999999988653
Q ss_pred CCCEEEeccccceeecHHHHHHHHHHHhc
Q 021951 276 NLPVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 276 ~~~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
...+||||||++++||+++|++|.++|.+
T Consensus 238 ~~~aiiDSGTt~~~lP~~~~~~i~~~i~~ 266 (402)
T 3vf3_A 238 YDKSIVDSGTTNLRLPKKVFEAAVKSIKA 266 (402)
T ss_dssp SSCEEECTTCCSEEEEHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCcccCCHHHHHHHHHHHhh
Confidence 46899999999999999999999999875
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.87 E-value=3.4e-22 Score=175.69 Aligned_cols=132 Identities=20% Similarity=0.250 Sum_probs=110.8
Q ss_pred CcCCCceEEEeeeecCCC-CCCCCcceEEecCCCCC------hHHHHhhhcccc-ceeeEEeecCCC----cceEEECCC
Q 021951 171 QRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKS------SIVSQLHSQKLI-RNVVGHCLSGGG----GGFLFFGDD 238 (305)
Q Consensus 171 ~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~------s~~~ql~~~~~i-~~~Fs~~L~~~~----~G~l~fG~~ 238 (305)
++.++++.|||++..... +.....+||||||++.+ +++.+|.+++.+ +++||+||.+.. .|.|+||+.
T Consensus 2 g~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~ 81 (241)
T 1lya_B 2 GVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGT 81 (241)
T ss_dssp CEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSC
T ss_pred CeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCc
Confidence 456789999999886432 44567899999999854 477899999988 899999998642 799999987
Q ss_pred C--CCCCCcEEEEcccCCCcceeeEeeEEEECCEEee-eCCCCEEEeccccceeecHHHHHHHHHHHhc
Q 021951 239 L--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTG-LKNLPVVFDSGSSYTYLNRVTYQTLTSIVKR 304 (305)
Q Consensus 239 ~--~~~g~~~~~pl~~~~~~~y~v~l~~i~v~~~~~~-~~~~~~iiDSGTs~~~lp~~~~~~l~~~~~~ 304 (305)
+ ++.+++.|+|+... .+|.|.+++|+|+++.+. .....+||||||++++||+++|++|.+++++
T Consensus 82 d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~ 148 (241)
T 1lya_B 82 DSKYYKGSLSYLNVTRK--AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGA 148 (241)
T ss_dssp CGGGEEEEEEEEECSSB--TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTC
T ss_pred CHHHcCCceEEEECccc--cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCC
Confidence 5 35689999999875 699999999999997643 2457899999999999999999999999864
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.86 E-value=6.7e-22 Score=149.53 Aligned_cols=88 Identities=20% Similarity=0.372 Sum_probs=74.3
Q ss_pred eEEEeecccCCeeEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCC----CCCCCCCCCCCCCCCCCCCCcccccCcCC
Q 021951 55 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV----RCVEAPHPLYRPSNDLVPCEDPICASLHA 130 (305)
Q Consensus 55 ~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~C~----~C~~~~~~~y~p~~S~v~c~s~~C~~~~~ 130 (305)
.+||.+. .+.+|+++|.||||+|++.|+|||||+++||+|. .|. .|.. ++.|+|++|. +++.
T Consensus 4 ~~~l~n~--~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~~C~~--~~~y~p~~Ss------T~~~--- 69 (97)
T 1lya_A 4 PEVLKNY--MDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSI-HCKLLDIACWI--HHKYNSDKSS------TYVK--- 69 (97)
T ss_dssp EEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCTTCHHHHT--SCCBCGGGCT------TCEE---
T ss_pred eEeeEEC--CCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEc-CccCcccccCC--CCCCCchhCC------Ccee---
Confidence 4777653 4789999999999999999999999999999999 897 6863 6899998873 1111
Q ss_pred CCCCCCCCCCCceeEeeeCCCCeEEEEEEEEEEEEe
Q 021951 131 PGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFN 166 (305)
Q Consensus 131 ~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~l~ 166 (305)
..|.|.+.|++|+ +.|.+++|+|+|+
T Consensus 70 ---------~~~~~~i~Yg~Gs-~~G~~~~Dtv~i~ 95 (97)
T 1lya_A 70 ---------NGTSFDIHYGSGS-LSGYLSQDTVSVP 95 (97)
T ss_dssp ---------EEEEEEEECSSCE-EEEEEEEEEEEES
T ss_pred ---------CCCcEEEEECCcE-EEEEEEEEEEEEC
Confidence 3679999999995 9999999999995
No 37
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=87.08 E-value=0.7 Score=33.93 Aligned_cols=27 Identities=37% Similarity=0.263 Sum_probs=23.4
Q ss_pred EEEEEeCCCCeEEEEEEECCCCceeEecC
Q 021951 69 NVTMYIGQPARPYFLDLDTGSDLTWLQCD 97 (305)
Q Consensus 69 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~ 97 (305)
++++.|| .|.+.+++|||.+++-+...
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCC
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEecc
Confidence 5789999 59999999999999988644
No 38
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=86.95 E-value=0.7 Score=34.26 Aligned_cols=26 Identities=31% Similarity=0.383 Sum_probs=23.1
Q ss_pred EEEEEEeCCCCeEEEEEEECCCCceeEe
Q 021951 68 YNVTMYIGQPARPYFLDLDTGSDLTWLQ 95 (305)
Q Consensus 68 Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~ 95 (305)
-+++|.|| .|.+.+++|||++++-+.
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 36789999 599999999999999987
No 39
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=86.33 E-value=0.72 Score=34.65 Aligned_cols=29 Identities=21% Similarity=0.251 Sum_probs=24.9
Q ss_pred EEEEEeC---CCCeEEEEEEECCCCceeEecC
Q 021951 69 NVTMYIG---QPARPYFLDLDTGSDLTWLQCD 97 (305)
Q Consensus 69 ~~~i~iG---tP~q~~~v~~DTGSs~~Wv~~~ 97 (305)
.++|.|| +|+|.+..++|||.+++-+...
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~ 43 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIA 43 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGG
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecc
Confidence 5667777 7899999999999999999865
No 40
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=84.65 E-value=1 Score=33.03 Aligned_cols=27 Identities=37% Similarity=0.390 Sum_probs=23.4
Q ss_pred EEEEEeCCCCeEEEEEEECCCCceeEecC
Q 021951 69 NVTMYIGQPARPYFLDLDTGSDLTWLQCD 97 (305)
Q Consensus 69 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~ 97 (305)
++++.|| .|.+.+++|||.+++-+...
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCc
Confidence 6789999 59999999999999988643
No 41
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=81.43 E-value=1.4 Score=34.34 Aligned_cols=30 Identities=20% Similarity=0.218 Sum_probs=26.2
Q ss_pred CeeEEEEEEeCCCCeEEEEEEECCCCceeEec
Q 021951 65 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQC 96 (305)
Q Consensus 65 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~ 96 (305)
.+.+++++.|+ .+++.+++|||++.+-+..
T Consensus 24 ~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 24 VPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred cceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 56789999998 5899999999999988864
No 42
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=79.02 E-value=2 Score=32.40 Aligned_cols=26 Identities=31% Similarity=0.499 Sum_probs=22.2
Q ss_pred EEEEEeCCCCeEEEEEEECCCCceeEecC
Q 021951 69 NVTMYIGQPARPYFLDLDTGSDLTWLQCD 97 (305)
Q Consensus 69 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~ 97 (305)
++ |.|| .|.+.+++|||.+++-+.-.
T Consensus 16 ~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 16 IL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred EE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 44 8898 59999999999999988754
No 43
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=78.50 E-value=2.4 Score=31.84 Aligned_cols=27 Identities=19% Similarity=0.463 Sum_probs=23.8
Q ss_pred EEEEEeCCCCeEEEEEEECCCCceeEecC
Q 021951 69 NVTMYIGQPARPYFLDLDTGSDLTWLQCD 97 (305)
Q Consensus 69 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~ 97 (305)
.+++.|| .|.+..++|||.+++-+...
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~ 37 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLE 37 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEecc
Confidence 5778999 59999999999999999765
No 44
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=77.79 E-value=3 Score=32.34 Aligned_cols=30 Identities=10% Similarity=0.119 Sum_probs=25.0
Q ss_pred EEEECCEEeeeCCCCEEEeccccceeecHHHHHHH
Q 021951 264 ELFFGGETTGLKNLPVVFDSGSSYTYLNRVTYQTL 298 (305)
Q Consensus 264 ~i~v~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l 298 (305)
.+.++|+.+. ++||||++.+.++.++.+.+
T Consensus 30 ~v~InG~~~~-----~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 30 NIEINNYPVK-----AFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp EEEETTEEEE-----EEECTTCSSCEEEHHHHHHH
T ss_pred EEEECCEEEE-----EEEECCCCccccCHHHHHHc
Confidence 4678888654 79999999999999888765
No 45
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=75.32 E-value=2.8 Score=32.98 Aligned_cols=30 Identities=17% Similarity=0.231 Sum_probs=24.9
Q ss_pred EEEECCEEeeeCCCCEEEeccccceeecHHHHHHH
Q 021951 264 ELFFGGETTGLKNLPVVFDSGSSYTYLNRVTYQTL 298 (305)
Q Consensus 264 ~i~v~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l 298 (305)
.+.+||+.+. ++||||++.+.++.+..+.+
T Consensus 28 ~~~Ing~~v~-----~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 28 NCKVNGHPLK-----AFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp EEEETTEEEE-----EEECTTCSSCEEEHHHHHHT
T ss_pred EEEECCEEEE-----EEEeCCCCcEeeCHHHHHHc
Confidence 3557888664 79999999999999998875
No 46
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=71.37 E-value=3.7 Score=32.25 Aligned_cols=31 Identities=13% Similarity=0.233 Sum_probs=26.6
Q ss_pred CeeEEEEEEeCCCCeEEEEEEECCCCceeEecC
Q 021951 65 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCD 97 (305)
Q Consensus 65 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~ 97 (305)
...|++++.|. .+++.+++|||++.+.+.-.
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 44689999998 59999999999999988754
No 47
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=65.67 E-value=6.4 Score=30.32 Aligned_cols=29 Identities=24% Similarity=0.383 Sum_probs=24.2
Q ss_pred eEEEEEEeCCCCeEEEEEEECCCCceeEecC
Q 021951 67 YYNVTMYIGQPARPYFLDLDTGSDLTWLQCD 97 (305)
Q Consensus 67 ~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~ 97 (305)
.-++++.|+ .|.+.+++|||.+++-+...
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 457788998 49999999999999988643
No 48
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=65.31 E-value=6 Score=32.83 Aligned_cols=27 Identities=37% Similarity=0.256 Sum_probs=23.4
Q ss_pred EEEEEEeCCCCeEEEEEEECCCCceeEec
Q 021951 68 YNVTMYIGQPARPYFLDLDTGSDLTWLQC 96 (305)
Q Consensus 68 Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~ 96 (305)
-.+++.|| .|.+.+++|||.+++-+..
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEec
Confidence 36789999 5999999999999998864
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=62.58 E-value=6.5 Score=29.92 Aligned_cols=22 Identities=23% Similarity=0.211 Sum_probs=18.6
Q ss_pred eCCCCeEEEEEEECCCCceeEecC
Q 021951 74 IGQPARPYFLDLDTGSDLTWLQCD 97 (305)
Q Consensus 74 iGtP~q~~~v~~DTGSs~~Wv~~~ 97 (305)
|| .|.+..++|||.+++-+...
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~ 48 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEE 48 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETT
T ss_pred CC--CEEEEEEecCCCCcEEEecc
Confidence 55 48889999999999998754
No 50
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=43.98 E-value=22 Score=29.39 Aligned_cols=27 Identities=37% Similarity=0.226 Sum_probs=23.2
Q ss_pred EEEEEeCCCCeEEEEEEECCCCceeEecC
Q 021951 69 NVTMYIGQPARPYFLDLDTGSDLTWLQCD 97 (305)
Q Consensus 69 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~ 97 (305)
.+++.||- |.+..++|||.+++-+...
T Consensus 114 ~~~iki~G--q~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 114 LVTIRIGG--QLKEALLDTGADDTVIEEL 140 (203)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEECSC
T ss_pred cEEEEECC--EEEeeeecccCCceeeecc
Confidence 68899994 9999999999999988543
No 51
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=43.95 E-value=22 Score=25.99 Aligned_cols=35 Identities=14% Similarity=0.286 Sum_probs=26.9
Q ss_pred ceeeEeeEEEECCEEeeeCCCCEEEeccccceeecHHHHH
Q 021951 257 YYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNRVTYQ 296 (305)
Q Consensus 257 ~y~v~l~~i~v~~~~~~~~~~~~iiDSGTs~~~lp~~~~~ 296 (305)
.|+=.+..|.++|+.+. +++|||+-.+.+..+...
T Consensus 5 l~~RP~v~v~I~Gq~~e-----~LLDTGAD~TVl~~~~w~ 39 (104)
T 1fmb_A 5 LEKRPTTIVLINDTPLN-----VLLDTGADTSVLTTAHYN 39 (104)
T ss_dssp SSSCCEEEEEETTEEEE-----EEECTTCSSCEEEHHHHH
T ss_pred ccCCCEEEEEECCEEEE-----EEeccCCCcEEEccccCc
Confidence 34445567899998654 799999999999976654
No 52
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=41.97 E-value=27 Score=29.19 Aligned_cols=40 Identities=20% Similarity=0.119 Sum_probs=27.1
Q ss_pred eeEEEeecccCCeeEEEE---EEeCC-----CCeEEEEEEECCCCceeEecC
Q 021951 54 LLFQVHGNVYPTGYYNVT---MYIGQ-----PARPYFLDLDTGSDLTWLQCD 97 (305)
Q Consensus 54 ~~~pl~~~~~~~~~Y~~~---i~iGt-----P~q~~~v~~DTGSs~~Wv~~~ 97 (305)
.-+|+.. .++|.+. |.||. +.....+++|||++++++|..
T Consensus 180 ~~~p~~~----~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 180 TYVPVTY----QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp EEEEEEE----ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred EEEEccc----CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 3456643 2356655 67775 234578999999999999854
No 53
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=37.37 E-value=29 Score=25.11 Aligned_cols=31 Identities=16% Similarity=0.413 Sum_probs=24.2
Q ss_pred ceeeEeeEEEECCEEeeeCCCCEEEeccccceeecH
Q 021951 257 YYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNR 292 (305)
Q Consensus 257 ~y~v~l~~i~v~~~~~~~~~~~~iiDSGTs~~~lp~ 292 (305)
.|+=.+..|.++|+.+. +++|||+-.+.+.+
T Consensus 5 l~~rP~vtvkI~Gq~~e-----aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 5 LWKRPLVTIKIGGQLKE-----ALLDTGADDTIIEE 35 (99)
T ss_dssp SSSCCEEEEEETTEEEE-----EEECTTCSSEEESC
T ss_pred ccCCCEEEEEECCEEEE-----EEeccCCCcEEEec
Confidence 45555667899998765 79999999988864
No 54
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=33.77 E-value=34 Score=24.77 Aligned_cols=30 Identities=17% Similarity=0.422 Sum_probs=23.9
Q ss_pred ceeeEeeEEEECCEEeeeCCCCEEEeccccceeec
Q 021951 257 YYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLN 291 (305)
Q Consensus 257 ~y~v~l~~i~v~~~~~~~~~~~~iiDSGTs~~~lp 291 (305)
.|+=.+..|.++|+.+. +++|||+-.+.+.
T Consensus 5 l~~RP~vti~I~Gq~~e-----~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 5 LWKRPVVTAYIEGQPVE-----VLLDTGADDSIVA 34 (99)
T ss_dssp SSSCCEEEEEETTEEEE-----EEECTTCSSCEES
T ss_pred cccCCeEEEEECCEEEE-----EEEecCCCceEEc
Confidence 46556677999998765 6999999888775
No 55
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=33.68 E-value=39 Score=25.81 Aligned_cols=26 Identities=23% Similarity=0.413 Sum_probs=21.1
Q ss_pred eeEEEECCEEeeeCCCCEEEeccccceeecH
Q 021951 262 VAELFFGGETTGLKNLPVVFDSGSSYTYLNR 292 (305)
Q Consensus 262 l~~i~v~~~~~~~~~~~~iiDSGTs~~~lp~ 292 (305)
+..+.++|+.+. +++|||...+.|+.
T Consensus 24 ~v~i~I~G~~~~-----~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 24 RITLKVGGQPVT-----FLVDTGAQHSVLTQ 49 (132)
T ss_dssp EEEEEETTEEEE-----EEECTTCSSCEECS
T ss_pred EEEEEECCEEEE-----EEEeCCCCeEEEcc
Confidence 446888998765 69999999999875
No 56
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=33.37 E-value=41 Score=25.12 Aligned_cols=32 Identities=28% Similarity=0.456 Sum_probs=25.7
Q ss_pred cceeeEeeEEEECCEEeeeCCCCEEEeccccceeecHH
Q 021951 256 KYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNRV 293 (305)
Q Consensus 256 ~~y~v~l~~i~v~~~~~~~~~~~~iiDSGTs~~~lp~~ 293 (305)
..|+=.+. |.++|+.+. +++|||+-.+.+.+.
T Consensus 10 ~l~~rP~v-ikI~Gq~~e-----aLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 10 LEKRPEIL-IFVNGYPIK-----FLLDTGADITVLNRR 41 (116)
T ss_dssp SSSCCEEE-EEETTEEEE-----EEECTTCSSCEEEGG
T ss_pred cccCCCEE-EEECCEEEE-----EEecCCCCcEEEccc
Confidence 35766777 999998764 799999999988753
No 57
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=32.41 E-value=66 Score=28.44 Aligned_cols=44 Identities=23% Similarity=0.277 Sum_probs=30.2
Q ss_pred CCCcEEEEcccCCCcceeeEeeEEEEC--CEEeeeCCCCEEEeccccceeecHH
Q 021951 242 SSRVVWTSMSSDYTKYYSPGVAELFFG--GETTGLKNLPVVFDSGSSYTYLNRV 293 (305)
Q Consensus 242 ~g~~~~~pl~~~~~~~y~v~l~~i~v~--~~~~~~~~~~~iiDSGTs~~~lp~~ 293 (305)
.|.+...||.......|.+ .|.|| .+.+ .++||||++.+.+|..
T Consensus 4 ~g~~~~~~l~~~~~~~Y~~---~i~iGtP~q~~-----~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFDLEEYAI---PVSIGTPGQDF-----YLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETTTTEEEE---EEEETTTTEEE-----EEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCCCCEEEE---EEEECCCCcEE-----EEEEcCCCCCeEECCC
Confidence 3566778887643246654 57777 4554 3799999999998754
No 58
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=27.03 E-value=53 Score=27.10 Aligned_cols=32 Identities=22% Similarity=0.263 Sum_probs=23.2
Q ss_pred eeEEE---EEEeCCC----CeEEEEEEECCCCceeEecC
Q 021951 66 GYYNV---TMYIGQP----ARPYFLDLDTGSDLTWLQCD 97 (305)
Q Consensus 66 ~~Y~~---~i~iGtP----~q~~~v~~DTGSs~~Wv~~~ 97 (305)
++|.+ .|.||.- .....+++|||++++++|..
T Consensus 99 ~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 99 AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 34544 4678752 24578999999999999865
No 59
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=26.91 E-value=59 Score=30.34 Aligned_cols=39 Identities=21% Similarity=0.240 Sum_probs=26.6
Q ss_pred eEEEeecccCCeeEEEE---EEeCC-----CCeEEEEEEECCCCceeEecC
Q 021951 55 LFQVHGNVYPTGYYNVT---MYIGQ-----PARPYFLDLDTGSDLTWLQCD 97 (305)
Q Consensus 55 ~~pl~~~~~~~~~Y~~~---i~iGt-----P~q~~~v~~DTGSs~~Wv~~~ 97 (305)
-+|+.. .++|.+. |.||. +.....+++|||++++++|..
T Consensus 224 ~~pv~~----~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~ 270 (478)
T 1qdm_A 224 YVPVTQ----KGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTA 270 (478)
T ss_dssp EEEEEE----ETTEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECHH
T ss_pred EEeccC----CCeEEEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHH
Confidence 356643 2356554 66764 234578999999999999854
No 60
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=24.48 E-value=50 Score=28.87 Aligned_cols=41 Identities=22% Similarity=0.272 Sum_probs=28.3
Q ss_pred eeEEEeecccCCeeEEEE---EEeCC---CCeEEEEEEECCCCceeEecC
Q 021951 54 LLFQVHGNVYPTGYYNVT---MYIGQ---PARPYFLDLDTGSDLTWLQCD 97 (305)
Q Consensus 54 ~~~pl~~~~~~~~~Y~~~---i~iGt---P~q~~~v~~DTGSs~~Wv~~~ 97 (305)
.-+|+..+ .++|.+. |.||. +.....+++|||++++++|..
T Consensus 184 ~~~p~~~~---~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 184 AYTPVDNS---QGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp EEEECBCT---TSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred EEEEccCC---CceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 34666421 3456655 56775 245689999999999999864
No 61
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=23.14 E-value=1.1e+02 Score=26.59 Aligned_cols=42 Identities=24% Similarity=0.378 Sum_probs=27.4
Q ss_pred ceeEEEeecccCCeeEEEE---EEeCCC--CeEEEEEEECCCCceeEecC
Q 021951 53 SLLFQVHGNVYPTGYYNVT---MYIGQP--ARPYFLDLDTGSDLTWLQCD 97 (305)
Q Consensus 53 ~~~~pl~~~~~~~~~Y~~~---i~iGtP--~q~~~v~~DTGSs~~Wv~~~ 97 (305)
..-+|+... .++|.+. |.||.+ .....+++|||++++++|..
T Consensus 183 l~~~p~~~~---~~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 183 LTTVPIDNS---RGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp CEEEECBCT---TSSCEEEECEEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred eEEEEccCC---CCEEEEEEeEEEECCEecCCCceEEEecCCccEECCHH
Confidence 344666421 2345543 677762 34568999999999999864
No 62
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=22.73 E-value=59 Score=28.27 Aligned_cols=42 Identities=19% Similarity=0.249 Sum_probs=27.6
Q ss_pred ceeEEEeecccCCeeEEEE---EEeCC-CCeEEEEEEECCCCceeEecC
Q 021951 53 SLLFQVHGNVYPTGYYNVT---MYIGQ-PARPYFLDLDTGSDLTWLQCD 97 (305)
Q Consensus 53 ~~~~pl~~~~~~~~~Y~~~---i~iGt-P~q~~~v~~DTGSs~~Wv~~~ 97 (305)
..-+|+..+ .++|.++ |.||. +.....+++|||++++++|..
T Consensus 179 l~~~p~~~~---~~~w~v~l~~i~v~~~~~~~~~aiiDSGTs~~~lP~~ 224 (323)
T 1bxo_A 179 LTYTGVDNS---QGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDDS 224 (323)
T ss_dssp CEEEECBCT---TSSCEEEEEEEEETTEEEEEEEEEECTTCSSEEECHH
T ss_pred eEEEECCCC---CCeEEEEEeeEEECCccCCCceEEEeCCCCceeCCHH
Confidence 334666421 2345544 56765 335578999999999999864
No 63
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=22.51 E-value=1e+02 Score=27.65 Aligned_cols=39 Identities=15% Similarity=0.054 Sum_probs=26.1
Q ss_pred EEEcccCCC-cceeeEeeEEEEC--CEEeeeCCCCEEEeccccceeecHH
Q 021951 247 WTSMSSDYT-KYYSPGVAELFFG--GETTGLKNLPVVFDSGSSYTYLNRV 293 (305)
Q Consensus 247 ~~pl~~~~~-~~y~v~l~~i~v~--~~~~~~~~~~~iiDSGTs~~~lp~~ 293 (305)
-.||..+.. ..|.+ .|.|| .+.+ .++||||++.+.+|..
T Consensus 11 ~~pl~~~~~~~~Y~~---~i~iGTP~Q~~-----~v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 11 VLPVQNDGSTGLHWA---NLQKRTPLMQV-----PVLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEEECTTTCCEEE---EEEETTTTEEE-----EEEEETTCSSEEEECS
T ss_pred EEeeecCCCCceEEE---EEECCCCCcee-----EEEEECCCCceeECCC
Confidence 467774322 45654 56677 3443 4799999999999854
No 64
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=22.49 E-value=61 Score=28.26 Aligned_cols=41 Identities=22% Similarity=0.284 Sum_probs=27.6
Q ss_pred eeEEEeecccCCeeEEEE---EEeCCC---CeEEEEEEECCCCceeEecC
Q 021951 54 LLFQVHGNVYPTGYYNVT---MYIGQP---ARPYFLDLDTGSDLTWLQCD 97 (305)
Q Consensus 54 ~~~pl~~~~~~~~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 97 (305)
.-+|+..+ .++|.+. |.||.- .....+++|||++++++|..
T Consensus 183 ~~~p~~~~---~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 229 (329)
T 1oew_A 183 TYTAVSTK---QGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPAT 229 (329)
T ss_dssp EEEECBCT---TSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECHH
T ss_pred EEEEccCC---CceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCHH
Confidence 34666421 2345444 678762 34678999999999999865
No 65
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=21.22 E-value=1e+02 Score=28.59 Aligned_cols=40 Identities=15% Similarity=0.205 Sum_probs=26.0
Q ss_pred eeEEEeecccCCeeEEEE--EEeCCCC-eEEEEEEECCCCceeEecC
Q 021951 54 LLFQVHGNVYPTGYYNVT--MYIGQPA-RPYFLDLDTGSDLTWLQCD 97 (305)
Q Consensus 54 ~~~pl~~~~~~~~~Y~~~--i~iGtP~-q~~~v~~DTGSs~~Wv~~~ 97 (305)
.-+|+... ++|.+. |.||... ....+++|||++++++|..
T Consensus 307 ~~~pv~~~----~~w~V~l~I~Vgg~~~~~~~aIiDSGTsl~~lP~~ 349 (453)
T 2bju_A 307 TYEKLNHD----LYWQITLDAHVGNIMLEKANCIVDSGTSAITVPTD 349 (453)
T ss_dssp EEEEEEEE----TTEEEEEEEEETTEEEEEEEEEECTTCCSEEECHH
T ss_pred EEEecCCC----ceEEEEEEEEECcEEeccccEEEcCCCCeEecCHH
Confidence 34566432 345544 6777610 2367999999999999864
No 66
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=20.75 E-value=61 Score=28.23 Aligned_cols=32 Identities=28% Similarity=0.379 Sum_probs=22.9
Q ss_pred eeEEEE---EEeCC--CCeEEEEEEECCCCceeEecC
Q 021951 66 GYYNVT---MYIGQ--PARPYFLDLDTGSDLTWLQCD 97 (305)
Q Consensus 66 ~~Y~~~---i~iGt--P~q~~~v~~DTGSs~~Wv~~~ 97 (305)
++|.++ |.||. +.....+++|||++++++|..
T Consensus 189 ~~w~v~l~~i~v~~~~~~~~~~aiiDSGTs~~~lp~~ 225 (323)
T 1izd_A 189 GFWGFTADGYSIGSDSSSDSITGIADTGTTLLLLDDS 225 (323)
T ss_dssp SSCEEEESEEEETTEEECCCEEEEECTTCCSEEECHH
T ss_pred ceEEEEECeEEECCcccCCCceEEEeCCCcceeCCHH
Confidence 345554 45665 234578999999999999864
No 67
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=20.18 E-value=68 Score=27.90 Aligned_cols=41 Identities=22% Similarity=0.370 Sum_probs=27.6
Q ss_pred eeEEEeecccCCeeEEEE---EEeCCC---CeEEEEEEECCCCceeEecC
Q 021951 54 LLFQVHGNVYPTGYYNVT---MYIGQP---ARPYFLDLDTGSDLTWLQCD 97 (305)
Q Consensus 54 ~~~pl~~~~~~~~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 97 (305)
.-+|+..+ .++|.++ |.||.- .....+++|||++++++|..
T Consensus 179 ~~~p~~~~---~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 225 (325)
T 1ibq_A 179 TYTDADSS---QGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLDDE 225 (325)
T ss_dssp EEEECBCT---TSSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEECHH
T ss_pred EEEEcCCC---CceEEEEECcEEECCeeccCCCceEEEeCCCCcEeCCHH
Confidence 34666421 3345554 577752 35678999999999999864
Done!