Query 021952
Match_columns 305
No_of_seqs 154 out of 1607
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 11:47:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021952.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021952hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 100.0 4.5E-38 1.5E-42 272.5 27.9 222 3-280 35-259 (306)
2 4asc_A Kelch repeat and BTB do 100.0 3.8E-38 1.3E-42 274.2 23.1 246 3-302 24-276 (315)
3 1zgk_A Kelch-like ECH-associat 100.0 2.1E-37 7E-42 268.7 27.3 221 3-279 50-273 (308)
4 2xn4_A Kelch-like protein 2; s 100.0 3.8E-37 1.3E-41 266.1 28.6 221 3-279 41-262 (302)
5 2woz_A Kelch repeat and BTB do 100.0 1.8E-37 6.1E-42 270.3 23.7 246 3-302 35-286 (318)
6 2vpj_A Kelch-like protein 12; 100.0 2.3E-36 7.8E-41 261.1 28.8 221 3-280 42-265 (301)
7 1zgk_A Kelch-like ECH-associat 100.0 4.1E-36 1.4E-40 260.6 22.9 216 9-280 9-227 (308)
8 2uvk_A YJHT; unknown function, 100.0 4.5E-36 1.5E-40 265.4 22.3 228 2-281 43-329 (357)
9 4asc_A Kelch repeat and BTB do 100.0 1.1E-35 3.9E-40 258.5 20.6 219 3-277 78-306 (315)
10 2woz_A Kelch repeat and BTB do 100.0 1.9E-35 6.5E-40 257.4 21.5 217 3-275 89-314 (318)
11 2zwa_A Leucine carboxyl methyl 100.0 3E-34 1E-38 273.9 25.8 248 3-303 423-694 (695)
12 3ii7_A Kelch-like protein 7; p 100.0 5.6E-34 1.9E-38 246.7 25.0 211 3-266 81-294 (306)
13 2vpj_A Kelch-like protein 12; 100.0 1.5E-33 5.3E-38 243.3 25.7 204 22-280 12-218 (301)
14 2uvk_A YJHT; unknown function, 100.0 3.4E-34 1.1E-38 253.4 21.8 219 10-280 5-264 (357)
15 2xn4_A Kelch-like protein 2; s 100.0 1.7E-33 5.9E-38 243.2 24.8 210 3-265 88-298 (302)
16 2zwa_A Leucine carboxyl methyl 100.0 4.5E-33 1.5E-37 265.8 24.7 223 10-280 384-619 (695)
17 1k3i_A Galactose oxidase precu 99.9 2.2E-26 7.4E-31 219.0 18.4 235 3-279 276-532 (656)
18 1k3i_A Galactose oxidase precu 99.9 1.2E-25 4E-30 214.0 23.3 231 3-279 177-477 (656)
19 3mbr_X Glutamine cyclotransfer 97.2 0.071 2.4E-06 43.5 20.6 191 19-277 25-224 (243)
20 3dsm_A Uncharacterized protein 96.7 0.22 7.5E-06 42.3 20.5 164 12-222 41-211 (328)
21 3nol_A Glutamine cyclotransfer 96.6 0.24 8.3E-06 40.7 19.3 191 18-277 46-245 (262)
22 3nok_A Glutaminyl cyclase; bet 96.4 0.34 1.1E-05 40.0 17.8 152 18-224 58-211 (268)
23 3dsm_A Uncharacterized protein 96.0 0.59 2E-05 39.5 20.9 158 19-223 88-253 (328)
24 3mbr_X Glutamine cyclotransfer 96.0 0.35 1.2E-05 39.4 14.7 105 82-224 29-134 (243)
25 2iwa_A Glutamine cyclotransfer 95.7 0.71 2.4E-05 38.1 21.3 157 18-224 24-182 (266)
26 3q7m_A Lipoprotein YFGL, BAMB; 95.0 1.5 5E-05 37.6 19.8 158 19-224 48-208 (376)
27 3nol_A Glutamine cyclotransfer 94.6 0.74 2.5E-05 37.8 12.5 104 83-224 52-156 (262)
28 3nok_A Glutaminyl cyclase; bet 94.1 0.9 3.1E-05 37.4 12.0 103 81-224 62-165 (268)
29 2iwa_A Glutamine cyclotransfer 94.0 1.9 6.6E-05 35.5 14.1 111 76-223 24-135 (266)
30 1l0q_A Surface layer protein; 93.7 2.9 9.8E-05 35.6 16.2 103 83-223 43-147 (391)
31 2xbg_A YCF48-like protein; pho 93.0 3.6 0.00012 34.6 20.9 158 2-205 109-268 (327)
32 3jrp_A Fusion protein of prote 93.0 3.5 0.00012 34.6 14.7 64 84-164 69-134 (379)
33 3bws_A Protein LP49; two-domai 92.9 4.2 0.00014 35.1 17.0 109 82-222 222-333 (433)
34 2xbg_A YCF48-like protein; pho 92.6 4.1 0.00014 34.3 20.0 157 2-205 66-223 (327)
35 3ju4_A Endo-N-acetylneuraminid 92.6 4.9 0.00017 35.1 18.6 193 59-277 271-481 (670)
36 2hqs_A Protein TOLB; TOLB, PAL 92.6 4.9 0.00017 35.0 17.2 97 100-222 247-343 (415)
37 3q7m_A Lipoprotein YFGL, BAMB; 92.5 4.5 0.00015 34.4 19.7 120 17-172 96-215 (376)
38 3v9f_A Two-component system se 91.6 8.8 0.0003 36.6 17.0 109 78-222 500-610 (781)
39 3jrp_A Fusion protein of prote 91.5 5.6 0.00019 33.3 17.3 66 138-223 171-240 (379)
40 2dg1_A DRP35, lactonase; beta 91.3 4.2 0.00014 33.8 13.0 123 24-172 55-177 (333)
41 1kb0_A Quinohemoprotein alcoho 90.0 13 0.00043 35.0 16.7 120 79-224 74-200 (677)
42 3jro_A Fusion protein of prote 89.9 10 0.00036 35.9 15.7 64 84-164 67-132 (753)
43 1yiq_A Quinohemoprotein alcoho 89.9 10 0.00034 35.8 15.3 119 79-224 67-193 (689)
44 3c5m_A Oligogalacturonate lyas 89.8 8.3 0.00028 32.6 16.3 102 100-222 216-328 (396)
45 3bws_A Protein LP49; two-domai 89.5 9.5 0.00032 32.8 17.4 67 82-164 132-200 (433)
46 2dg1_A DRP35, lactonase; beta 89.4 8.2 0.00028 31.9 14.3 122 77-222 49-170 (333)
47 4a2l_A BT_4663, two-component 89.2 16 0.00053 34.9 18.5 106 80-222 505-613 (795)
48 1kb0_A Quinohemoprotein alcoho 88.4 17 0.00057 34.2 23.6 132 18-173 71-208 (677)
49 3hfq_A Uncharacterized protein 88.0 11 0.00036 31.4 16.9 113 24-163 50-170 (347)
50 1kv9_A Type II quinohemoprotei 87.7 13 0.00044 34.9 14.4 120 79-224 63-188 (668)
51 2ad6_A Methanol dehydrogenase 87.7 17 0.00057 33.4 18.8 120 79-224 59-186 (571)
52 2aq5_A Coronin-1A; WD40 repeat 87.6 13 0.00043 31.8 15.0 110 85-223 145-254 (402)
53 1k8k_C P40, ARP2/3 complex 41 87.6 11 0.00039 31.3 13.5 109 82-222 18-126 (372)
54 1l0q_A Surface layer protein; 87.5 12 0.00041 31.6 15.9 143 25-223 44-189 (391)
55 3ott_A Two-component system se 87.0 21 0.00071 33.8 17.5 144 24-222 482-625 (758)
56 3jro_A Fusion protein of prote 86.8 19 0.00064 34.2 15.2 65 139-223 170-238 (753)
57 3ju4_A Endo-N-acetylneuraminid 86.3 16 0.00056 31.9 20.3 188 3-207 271-482 (670)
58 3vgz_A Uncharacterized protein 86.2 13 0.00045 30.7 20.7 106 82-222 195-302 (353)
59 2ad6_A Methanol dehydrogenase 86.2 20 0.00069 32.8 21.6 134 18-173 56-194 (571)
60 1jmx_B Amine dehydrogenase; ox 86.2 6.5 0.00022 32.5 10.6 115 24-164 10-134 (349)
61 3vgz_A Uncharacterized protein 85.9 14 0.00046 30.6 19.0 114 25-164 53-173 (353)
62 1flg_A Protein (quinoprotein e 85.5 22 0.00076 32.7 24.8 133 18-172 62-201 (582)
63 1w6s_A Methanol dehydrogenase 85.3 23 0.00079 32.7 20.2 135 18-173 56-200 (599)
64 3pe7_A Oligogalacturonate lyas 85.1 16 0.00055 30.8 12.7 111 41-172 168-279 (388)
65 3v9f_A Two-component system se 84.8 15 0.00051 34.9 13.5 130 56-222 523-655 (781)
66 4d9s_A UVB-resistance protein 84.5 19 0.00067 31.2 17.1 66 74-146 182-251 (406)
67 4d9s_A UVB-resistance protein 84.3 20 0.00068 31.1 14.0 66 74-146 234-303 (406)
68 3scy_A Hypothetical bacterial 83.9 18 0.00061 30.3 15.7 78 85-172 14-92 (361)
69 1q7f_A NHL, brain tumor CG1071 83.9 15 0.00052 29.5 19.3 107 82-222 87-193 (286)
70 1r5m_A SIR4-interacting protei 82.9 20 0.0007 30.2 16.0 104 82-222 257-360 (425)
71 1k8k_C P40, ARP2/3 complex 41 82.4 20 0.00069 29.7 17.1 154 24-222 19-172 (372)
72 1nir_A Nitrite reductase; hemo 82.3 29 0.00098 31.5 14.6 62 24-110 148-212 (543)
73 1w6s_A Methanol dehydrogenase 82.2 31 0.0011 31.8 17.0 122 78-224 58-192 (599)
74 4gqb_B Methylosome protein 50; 81.9 22 0.00075 29.9 13.9 107 82-223 137-246 (344)
75 1ri6_A Putative isomerase YBHE 81.4 21 0.0007 29.2 13.0 18 155-172 253-270 (343)
76 4g56_B MGC81050 protein; prote 81.3 23 0.0008 29.8 15.2 62 85-164 195-258 (357)
77 3dwl_C Actin-related protein 2 81.0 6.1 0.00021 33.3 8.3 107 83-223 22-131 (377)
78 4e54_B DNA damage-binding prot 80.9 27 0.00092 30.2 14.6 64 84-164 177-240 (435)
79 3fm0_A Protein CIAO1; WDR39,SG 80.6 24 0.00082 29.4 14.4 66 82-164 71-136 (345)
80 3no2_A Uncharacterized protein 79.9 23 0.00078 28.8 18.6 183 23-275 46-230 (276)
81 3iuj_A Prolyl endopeptidase; h 78.9 42 0.0014 31.3 16.7 151 41-224 155-315 (693)
82 2ojh_A Uncharacterized protein 78.0 24 0.0008 27.9 17.6 104 40-172 21-125 (297)
83 4ery_A WD repeat-containing pr 77.9 26 0.0009 28.4 18.8 105 83-222 118-222 (312)
84 1flg_A Protein (quinoprotein e 77.6 43 0.0015 30.7 16.3 76 79-172 65-144 (582)
85 4aez_A CDC20, WD repeat-contai 77.6 32 0.0011 29.2 16.9 64 83-164 228-293 (401)
86 4g56_B MGC81050 protein; prote 76.4 33 0.0011 28.8 14.2 68 134-223 146-213 (357)
87 1kv9_A Type II quinohemoprotei 76.3 50 0.0017 30.8 24.8 132 17-172 59-195 (668)
88 3no2_A Uncharacterized protein 76.0 30 0.001 28.1 14.3 83 100-204 146-230 (276)
89 1ri6_A Putative isomerase YBHE 75.6 31 0.0011 28.1 15.6 52 100-163 60-114 (343)
90 3fm0_A Protein CIAO1; WDR39,SG 75.6 34 0.0012 28.5 13.0 108 82-222 26-135 (345)
91 1gxr_A ESG1, transducin-like e 75.5 31 0.0011 27.9 17.7 103 83-223 194-296 (337)
92 3pe7_A Oligogalacturonate lyas 74.6 37 0.0013 28.4 16.5 56 155-222 168-224 (388)
93 4gqb_B Methylosome protein 50; 74.2 38 0.0013 28.4 13.2 69 133-223 133-201 (344)
94 1gxr_A ESG1, transducin-like e 73.9 34 0.0012 27.7 14.6 110 82-222 61-171 (337)
95 1jmx_B Amine dehydrogenase; ox 73.2 36 0.0012 27.7 11.6 64 83-164 10-74 (349)
96 4a2l_A BT_4663, two-component 72.4 67 0.0023 30.5 17.9 96 101-222 472-570 (795)
97 3azo_A Aminopeptidase; POP fam 72.0 60 0.002 29.7 15.9 101 99-222 160-273 (662)
98 3hfq_A Uncharacterized protein 71.6 41 0.0014 27.7 17.5 67 82-163 49-116 (347)
99 4ery_A WD repeat-containing pr 69.0 44 0.0015 27.0 19.3 109 83-223 160-268 (312)
100 2ovr_B FBW7, F-BOX/WD repeat p 68.0 58 0.002 28.0 21.5 104 81-223 287-391 (445)
101 1q7f_A NHL, brain tumor CG1071 67.9 44 0.0015 26.6 19.4 113 76-222 124-237 (286)
102 3kci_A Probable E3 ubiquitin-p 67.8 58 0.002 27.9 12.3 66 74-146 222-291 (389)
103 4aez_A CDC20, WD repeat-contai 67.5 56 0.0019 27.6 17.9 109 81-223 184-293 (401)
104 1nir_A Nitrite reductase; hemo 66.8 74 0.0025 28.7 12.5 100 100-223 302-402 (543)
105 2pm9_A Protein WEB1, protein t 66.5 57 0.002 27.4 12.8 109 84-222 178-293 (416)
106 3u4y_A Uncharacterized protein 65.2 54 0.0018 26.6 16.4 109 24-170 9-121 (331)
107 3kci_A Probable E3 ubiquitin-p 65.1 66 0.0023 27.5 12.7 18 74-91 168-185 (389)
108 1pjx_A Dfpase, DIISOPROPYLFLUO 64.9 53 0.0018 26.4 15.7 104 41-163 46-161 (314)
109 3ow8_A WD repeat-containing pr 64.8 57 0.002 26.8 19.0 105 82-222 174-278 (321)
110 2ghs_A AGR_C_1268P; regucalcin 64.0 60 0.0021 26.7 17.1 112 25-172 61-174 (326)
111 1yiq_A Quinohemoprotein alcoho 63.6 97 0.0033 29.0 26.1 131 18-172 64-200 (689)
112 2bkl_A Prolyl endopeptidase; m 62.2 1E+02 0.0034 28.6 14.0 123 78-223 173-304 (695)
113 3ei3_B DNA damage-binding prot 62.0 69 0.0023 26.7 17.2 105 84-223 131-236 (383)
114 3c5m_A Oligogalacturonate lyas 61.9 68 0.0023 26.7 12.6 60 101-172 265-335 (396)
115 3scy_A Hypothetical bacterial 61.8 68 0.0023 26.5 17.5 22 137-164 108-129 (361)
116 3u4y_A Uncharacterized protein 61.0 65 0.0022 26.1 13.1 62 83-164 9-71 (331)
117 1yr2_A Prolyl oligopeptidase; 60.9 1.1E+02 0.0038 28.7 15.3 105 99-222 242-349 (741)
118 2xdw_A Prolyl endopeptidase; a 60.6 1.1E+02 0.0037 28.5 18.2 106 99-223 207-320 (710)
119 4e54_B DNA damage-binding prot 60.6 81 0.0028 27.1 15.5 107 84-222 132-239 (435)
120 2vdu_B TRNA (guanine-N(7)-)-me 60.6 82 0.0028 27.1 15.0 107 83-223 160-271 (450)
121 1rwi_B Serine/threonine-protei 60.5 59 0.002 25.4 16.3 110 76-222 70-179 (270)
122 3ei3_B DNA damage-binding prot 60.4 73 0.0025 26.5 16.9 106 85-222 87-193 (383)
123 2z2n_A Virginiamycin B lyase; 60.3 62 0.0021 25.6 18.0 110 76-221 102-211 (299)
124 3azo_A Aminopeptidase; POP fam 59.9 1E+02 0.0035 28.1 17.2 114 83-224 252-370 (662)
125 2ojh_A Uncharacterized protein 58.8 63 0.0022 25.2 16.8 104 42-172 63-168 (297)
126 4aow_A Guanine nucleotide-bind 58.2 72 0.0025 25.7 14.0 61 85-164 186-246 (340)
127 3dwl_C Actin-related protein 2 57.3 28 0.00095 29.1 7.1 66 135-222 19-85 (377)
128 3g4e_A Regucalcin; six bladed 57.1 76 0.0026 25.6 15.1 109 24-164 24-139 (297)
129 2hqs_A Protein TOLB; TOLB, PAL 56.6 95 0.0033 26.6 18.9 111 83-223 189-300 (415)
130 2qc5_A Streptogramin B lactona 54.9 77 0.0026 25.0 17.7 110 76-221 107-216 (300)
131 2z2n_A Virginiamycin B lyase; 54.4 78 0.0027 25.0 18.1 111 76-222 144-254 (299)
132 3g4e_A Regucalcin; six bladed 53.9 86 0.0029 25.3 12.7 144 42-222 74-228 (297)
133 3vl1_A 26S proteasome regulato 53.0 1E+02 0.0035 25.9 18.4 64 82-164 149-212 (420)
134 3mkq_A Coatomer beta'-subunit; 51.0 1.6E+02 0.0054 27.5 15.2 104 83-223 152-259 (814)
135 1qks_A Cytochrome CD1 nitrite 50.6 1.5E+02 0.005 27.0 13.8 165 40-222 363-537 (567)
136 2hz6_A Endoplasmic reticulum t 50.3 23 0.00079 30.2 5.4 63 136-224 7-69 (369)
137 3ott_A Two-component system se 49.9 1.7E+02 0.0057 27.5 16.1 110 78-223 477-586 (758)
138 1p22_A F-BOX/WD-repeat protein 49.8 1.2E+02 0.0042 25.8 13.2 105 20-164 138-242 (435)
139 1pjx_A Dfpase, DIISOPROPYLFLUO 49.4 99 0.0034 24.7 18.4 73 76-163 120-206 (314)
140 3ow8_A WD repeat-containing pr 48.0 1.1E+02 0.0038 24.9 17.0 104 82-222 132-236 (321)
141 2ecf_A Dipeptidyl peptidase IV 47.1 1.6E+02 0.0054 27.2 11.1 111 83-223 47-181 (741)
142 2mad_H Methylamine dehydrogena 46.4 62 0.0021 27.6 7.5 69 82-164 277-350 (373)
143 1qks_A Cytochrome CD1 nitrite 46.4 1.7E+02 0.0059 26.6 15.7 101 24-164 166-275 (567)
144 3hx6_A Type 4 fimbrial biogene 46.0 1.8E+02 0.0061 26.6 18.2 84 84-171 151-239 (570)
145 2hes_X YDR267CP; beta-propelle 45.8 1.2E+02 0.0042 24.7 13.5 21 196-222 259-279 (330)
146 1sq9_A Antiviral protein SKI8; 45.8 1.3E+02 0.0044 24.9 15.9 76 131-223 190-267 (397)
147 1got_B GT-beta; complex (GTP-b 45.0 1.3E+02 0.0043 24.7 17.4 106 82-222 194-300 (340)
148 2ynn_A Coatomer subunit beta'; 44.7 1.2E+02 0.0041 24.3 12.2 186 24-279 108-293 (304)
149 1p22_A F-BOX/WD-repeat protein 43.6 1.5E+02 0.0052 25.2 17.1 102 81-223 221-325 (435)
150 3zwl_B Eukaryotic translation 42.7 1.3E+02 0.0046 24.3 17.5 65 137-223 185-249 (369)
151 1rwi_B Serine/threonine-protei 41.9 1.2E+02 0.0041 23.5 19.6 110 77-222 112-221 (270)
152 2z3z_A Dipeptidyl aminopeptida 41.8 2.1E+02 0.0071 26.2 16.4 60 154-223 234-293 (706)
153 3zwl_B Eukaryotic translation 40.0 1.5E+02 0.005 24.0 16.1 67 83-164 85-151 (369)
154 1erj_A Transcriptional repress 39.6 1.7E+02 0.0058 24.6 15.3 105 82-223 133-238 (393)
155 1vyh_C Platelet-activating fac 39.1 1.8E+02 0.0061 24.7 13.4 104 84-223 120-223 (410)
156 2ecf_A Dipeptidyl peptidase IV 38.5 2.4E+02 0.0082 26.0 14.5 104 101-222 264-368 (741)
157 2pm9_A Protein WEB1, protein t 38.3 1.7E+02 0.0059 24.3 14.2 69 84-164 126-197 (416)
158 3o4h_A Acylamino-acid-releasin 38.0 2.2E+02 0.0075 25.4 10.8 113 78-224 116-228 (582)
159 3k26_A Polycomb protein EED; W 37.0 1.7E+02 0.0057 23.7 14.8 159 18-222 22-191 (366)
160 3mvd_K Regulator of chromosome 36.8 2E+02 0.0069 24.6 11.0 63 74-145 136-204 (423)
161 1got_B GT-beta; complex (GTP-b 36.7 1.7E+02 0.0059 23.8 14.3 93 101-223 165-257 (340)
162 3odt_A Protein DOA1; ubiquitin 36.4 1.6E+02 0.0053 23.2 13.0 102 82-222 194-295 (313)
163 2xyi_A Probable histone-bindin 35.9 2E+02 0.007 24.4 13.7 20 198-223 290-309 (430)
164 3mkq_A Coatomer beta'-subunit; 35.5 2.7E+02 0.0094 25.8 15.8 106 82-223 65-172 (814)
165 3lrv_A PRE-mRNA-splicing facto 35.2 1.8E+02 0.0062 23.7 15.4 186 23-274 137-329 (343)
166 2bkl_A Prolyl endopeptidase; m 35.0 2.7E+02 0.0093 25.6 15.7 99 99-222 251-350 (695)
167 3i2n_A WD repeat-containing pr 34.5 1.8E+02 0.0062 23.4 13.0 61 138-222 179-242 (357)
168 3f3f_A Nucleoporin SEH1; struc 34.5 1.7E+02 0.0059 23.2 10.0 67 137-223 21-90 (351)
169 4gga_A P55CDC, cell division c 33.6 2.2E+02 0.0074 24.1 13.9 21 138-164 241-261 (420)
170 1pgu_A Actin interacting prote 33.2 2.6E+02 0.0087 24.7 16.2 154 77-303 450-614 (615)
171 2pbi_B Guanine nucleotide-bind 32.5 2.1E+02 0.0072 23.6 13.8 103 85-222 211-314 (354)
172 2vdu_B TRNA (guanine-N(7)-)-me 31.8 2.4E+02 0.0083 24.0 14.6 22 83-110 251-272 (450)
173 2ghs_A AGR_C_1268P; regucalcin 31.4 2.1E+02 0.0073 23.3 13.1 64 84-172 61-124 (326)
174 3v7d_B Cell division control p 31.3 2.4E+02 0.0083 23.9 18.6 102 82-223 320-421 (464)
175 1fwx_A Nitrous oxide reductase 30.8 3.2E+02 0.011 25.1 11.6 92 69-172 82-192 (595)
176 4gga_A P55CDC, cell division c 30.7 2.4E+02 0.0083 23.7 17.0 105 82-223 157-261 (420)
177 4aow_A Guanine nucleotide-bind 30.4 2.1E+02 0.0071 22.8 14.1 22 196-223 316-337 (340)
178 1qhu_A Protein (hemopexin); be 28.9 3E+02 0.01 24.3 15.8 58 24-109 158-215 (460)
179 3vl1_A 26S proteasome regulato 28.8 2.5E+02 0.0086 23.3 18.5 106 84-223 259-365 (420)
180 3e5z_A Putative gluconolactona 28.1 2.2E+02 0.0076 22.4 17.8 91 100-222 153-245 (296)
181 3sjl_D Methylamine dehydrogena 28.0 1.5E+02 0.0053 25.5 7.0 68 138-223 291-363 (386)
182 3hx6_A Type 4 fimbrial biogene 27.6 3.6E+02 0.012 24.7 10.4 77 140-224 152-233 (570)
183 2z3z_A Dipeptidyl aminopeptida 27.6 3.5E+02 0.012 24.6 20.7 104 99-222 283-390 (706)
184 3sjl_D Methylamine dehydrogena 27.2 77 0.0026 27.4 4.9 71 82-169 290-366 (386)
185 2pbi_B Guanine nucleotide-bind 26.6 2.7E+02 0.0091 22.9 14.0 61 139-222 210-270 (354)
186 2oiz_A Aromatic amine dehydrog 25.1 2.5E+02 0.0086 23.3 7.9 70 78-164 260-334 (361)
187 3f3f_A Nucleoporin SEH1; struc 25.1 2.5E+02 0.0087 22.1 19.6 21 84-110 124-144 (351)
188 2p9w_A MAL S 1 allergenic prot 24.9 3.1E+02 0.011 23.1 16.5 159 77-279 141-306 (334)
189 3iz6_a 40S ribosomal protein R 24.6 3E+02 0.01 22.8 15.0 108 82-222 259-374 (380)
190 1vyh_C Platelet-activating fac 24.5 3.2E+02 0.011 23.0 13.3 64 82-164 160-223 (410)
191 2xdw_A Prolyl endopeptidase; a 23.7 4.3E+02 0.015 24.3 18.5 110 40-172 258-375 (710)
192 2mad_H Methylamine dehydrogena 22.9 3.1E+02 0.011 23.0 8.0 68 24-110 278-351 (373)
193 1a12_A RCC1, regulator of chro 22.5 3.6E+02 0.012 22.9 11.1 66 74-147 295-364 (413)
194 2aq5_A Coronin-1A; WD40 repeat 22.3 3.4E+02 0.011 22.5 15.8 68 83-164 187-254 (402)
195 1a12_A RCC1, regulator of chro 22.1 3.7E+02 0.013 22.9 10.8 63 74-147 120-191 (413)
196 1k32_A Tricorn protease; prote 21.8 5.6E+02 0.019 24.9 16.7 98 100-222 358-460 (1045)
197 2gop_A Trilobed protease; beta 21.6 3.2E+02 0.011 21.9 10.0 18 154-173 151-169 (347)
198 4a11_B DNA excision repair pro 21.5 3.3E+02 0.011 22.2 16.5 200 24-280 55-268 (408)
199 3dr2_A Exported gluconolactona 21.3 3.1E+02 0.011 21.8 12.9 82 78-172 91-184 (305)
200 2ece_A 462AA long hypothetical 20.8 4.4E+02 0.015 23.3 14.0 35 75-110 140-174 (462)
201 1yr2_A Prolyl oligopeptidase; 20.8 5.1E+02 0.017 24.0 15.7 104 40-172 293-401 (741)
202 1r5m_A SIR4-interacting protei 20.6 3.5E+02 0.012 22.1 18.2 68 131-222 210-277 (425)
203 3bg1_A Protein SEC13 homolog; 20.6 3.3E+02 0.011 21.8 8.2 19 198-222 71-89 (316)
204 3sfz_A APAF-1, apoptotic pepti 20.1 6.4E+02 0.022 24.9 14.3 64 82-164 625-688 (1249)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=4.5e-38 Score=272.47 Aligned_cols=222 Identities=19% Similarity=0.267 Sum_probs=193.4
Q ss_pred ceEecCCCCCCCCcceeEEEECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEec
Q 021952 3 KWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCID 82 (305)
Q Consensus 3 ~W~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~ 82 (305)
+|++++ ..|.+|.+|+++.++++||++||.. ....+++++||+ .+.+|+.+.. +|.+|..|+++.++
T Consensus 35 ~W~~~~-~~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~-------~~~~W~~~~~---~p~~r~~~~~~~~~ 101 (306)
T 3ii7_A 35 SWTDIR-CPFEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNV-------VKDSWYSKLG---PPTPRDSLAACAAE 101 (306)
T ss_dssp EEEECC-CCSCCCBSCEEEEETTEEEEECCBS--SSBCCEEEEEET-------TTTEEEEEEC---CSSCCBSCEEEEET
T ss_pred CEecCC-CCCcccceeEEEEECCEEEEEeCCC--CCCcceEEEEeC-------CCCeEEECCC---CCccccceeEEEEC
Confidence 699996 5788999999999999999999987 456789999999 8999999863 68899999999998
Q ss_pred CCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCc---ccceeEE
Q 021952 83 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYE---VLNDVWF 159 (305)
Q Consensus 83 ~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~---~~~~~~~ 159 (305)
+ +||++||.......++++++||+.++ +|++++ ++|.+|..|+++.+ +++||++||...... ..+++++
T Consensus 102 ~-~iyv~GG~~~~~~~~~~~~~~d~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~ 173 (306)
T 3ii7_A 102 G-KIYTSGGSEVGNSALYLFECYDTRTE----SWHTKP--SMLTQRCSHGMVEA-NGLIYVCGGSLGNNVSGRVLNSCEV 173 (306)
T ss_dssp T-EEEEECCBBTTBSCCCCEEEEETTTT----EEEEEC--CCSSCCBSCEEEEE-TTEEEEECCEESCTTTCEECCCEEE
T ss_pred C-EEEEECCCCCCCcEeeeEEEEeCCCC----ceEeCC--CCcCCcceeEEEEE-CCEEEEECCCCCCCCcccccceEEE
Confidence 7 99999998645567899999999999 999997 88999999999998 589999999853332 2889999
Q ss_pred EEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCCCcccccccccccccc
Q 021952 160 LDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGL 239 (305)
Q Consensus 160 ~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 239 (305)
||+.+ ++|+++. ++|.+|..|++++ .+++|||+||.+.. ...+++++||+.
T Consensus 174 yd~~~--~~W~~~~--------~~p~~r~~~~~~~-~~~~i~v~GG~~~~-~~~~~~~~yd~~----------------- 224 (306)
T 3ii7_A 174 YDPAT--ETWTELC--------PMIEARKNHGLVF-VKDKIFAVGGQNGL-GGLDNVEYYDIK----------------- 224 (306)
T ss_dssp EETTT--TEEEEEC--------CCSSCCBSCEEEE-ETTEEEEECCEETT-EEBCCEEEEETT-----------------
T ss_pred eCCCC--CeEEECC--------CccchhhcceEEE-ECCEEEEEeCCCCC-CCCceEEEeeCC-----------------
Confidence 99999 9999994 7899999999887 69999999998654 457889999998
Q ss_pred ccccceeecccCcCCCCCceeeeeeeCCCcEEEEEcCccCC
Q 021952 240 LLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDG 280 (305)
Q Consensus 240 ~~~~W~~v~~~~~~p~~r~~~~~~~~~~~~~i~v~GG~~~~ 280 (305)
+++|+.+.. +|.+|..|+++++ +++|||+||....
T Consensus 225 -~~~W~~~~~---~p~~r~~~~~~~~--~~~i~v~GG~~~~ 259 (306)
T 3ii7_A 225 -LNEWKMVSP---MPWKGVTVKCAAV--GSIVYVLAGFQGV 259 (306)
T ss_dssp -TTEEEECCC---CSCCBSCCEEEEE--TTEEEEEECBCSS
T ss_pred -CCcEEECCC---CCCCccceeEEEE--CCEEEEEeCcCCC
Confidence 889999864 8899999988875 6899999998543
No 2
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=3.8e-38 Score=274.19 Aligned_cols=246 Identities=16% Similarity=0.154 Sum_probs=198.9
Q ss_pred ceEecCCCCCCCCcceeEEEECCEEEEEcccc-----CCCCCcccceeecccccccccccceEEecccCCCCCCCCCCce
Q 021952 3 KWQKVNSGIPSGRFGHTCVVIGDCLVLFGGIN-----DRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHA 77 (305)
Q Consensus 3 ~W~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~-----~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~ 77 (305)
+|++.+...|.+|.+|+++.++++||++||.. ......+++|+||+ .+.+|+++. .+|.+|..|+
T Consensus 24 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~-------~~~~W~~~~---~~p~~r~~~~ 93 (315)
T 4asc_A 24 ECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDH-------LDSEWLGMP---PLPSPRCLFG 93 (315)
T ss_dssp EEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEET-------TTTEEEECC---CBSSCEESCE
T ss_pred eEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecC-------CCCeEEECC---CCCcchhcee
Confidence 68874433477999999999999999999973 12234566999999 899999876 3788999999
Q ss_pred eEEecCCEEEEEeccCC--CCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccc
Q 021952 78 ACCIDNRKMVIHAGIGL--YGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLN 155 (305)
Q Consensus 78 ~~~~~~~~lyv~GG~~~--~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~ 155 (305)
++.+++ +||++||... ....++++++||+.++ +|++++ ++|.+|.+|+++.+ +++||++||........+
T Consensus 94 ~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~ 165 (315)
T 4asc_A 94 LGEALN-SIYVVGGREIKDGERCLDSVMCYDRLSF----KWGESD--PLPYVVYGHTVLSH-MDLVYVIGGKGSDRKCLN 165 (315)
T ss_dssp EEEETT-EEEEECCEESSTTCCBCCCEEEEETTTT----EEEECC--CCSSCCBSCEEEEE-TTEEEEECCBCTTSCBCC
T ss_pred EEEECC-EEEEEeCCcCCCCCcccceEEEECCCCC----cEeECC--CCCCcccceeEEEE-CCEEEEEeCCCCCCcccc
Confidence 999987 9999999742 3457899999999999 999998 88999999999998 589999999965677889
Q ss_pred eeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCCCcccccccccc
Q 021952 156 DVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLD 235 (305)
Q Consensus 156 ~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 235 (305)
++++||+.+ ++|+++. ++|.+|..|++++ .+++|||+||.+.. ...+++++||+.
T Consensus 166 ~~~~yd~~~--~~W~~~~--------~~p~~r~~~~~~~-~~~~iyv~GG~~~~-~~~~~~~~yd~~------------- 220 (315)
T 4asc_A 166 KMCVYDPKK--FEWKELA--------PMQTARSLFGATV-HDGRIIVAAGVTDT-GLTSSAEVYSIT------------- 220 (315)
T ss_dssp CEEEEETTT--TEEEECC--------CCSSCCBSCEEEE-ETTEEEEEEEECSS-SEEEEEEEEETT-------------
T ss_pred eEEEEeCCC--CeEEECC--------CCCCchhceEEEE-ECCEEEEEeccCCC-CccceEEEEECC-------------
Confidence 999999999 9999994 7899999999887 79999999999754 357889999998
Q ss_pred ccccccccceeecccCcCCCCCceeeeeeeCCCcEEEEEcCccCCCcccCCCccccccCceeeEeee
Q 021952 236 SRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELV 302 (305)
Q Consensus 236 ~~~~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~d~~~~~~~ 302 (305)
+++|+.+.. +|.+|..|+++++ +++|||+||........ ........+++++||+.
T Consensus 221 -----~~~W~~~~~---~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~-~~~~~~~~~~v~~yd~~ 276 (315)
T 4asc_A 221 -----DNKWAPFEA---FPQERSSLSLVSL--VGTLYAIGGFATLETES-GELVPTELNDIWRYNEE 276 (315)
T ss_dssp -----TTEEEEECC---CSSCCBSCEEEEE--TTEEEEEEEEEEEECTT-SCEEEEEEEEEEEEETT
T ss_pred -----CCeEEECCC---CCCcccceeEEEE--CCEEEEECCccccCcCC-ccccccccCcEEEecCC
Confidence 889999865 8999999988774 67999999985321100 01111234567777653
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=2.1e-37 Score=268.72 Aligned_cols=221 Identities=19% Similarity=0.250 Sum_probs=191.7
Q ss_pred ceEecCCCCCCCCcceeEEEECCEEEEEcccc---CCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeE
Q 021952 3 KWQKVNSGIPSGRFGHTCVVIGDCLVLFGGIN---DRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAAC 79 (305)
Q Consensus 3 ~W~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~---~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~ 79 (305)
+|++++ ..|.+|.+|+++.++++||++||.. ......+++|+||+ .+.+|+++. .+|.+|..|+++
T Consensus 50 ~W~~~~-~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~-------~~~~W~~~~---~~p~~r~~~~~~ 118 (308)
T 1zgk_A 50 TWLRLA-DLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNP-------MTNQWSPCA---PMSVPRNRIGVG 118 (308)
T ss_dssp EEEECC-CCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEET-------TTTEEEECC---CCSSCCBTCEEE
T ss_pred eEeECC-CCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECC-------CCCeEeECC---CCCcCccccEEE
Confidence 799996 6788999999999999999999984 33445789999999 899999987 367899999999
Q ss_pred EecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEE
Q 021952 80 CIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWF 159 (305)
Q Consensus 80 ~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~ 159 (305)
.+++ +||++||.... ..++++++||+.++ +|++++ ++|.+|..|+++.+ +++||++||.. .....+++++
T Consensus 119 ~~~~-~iyv~GG~~~~-~~~~~~~~yd~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~iyv~GG~~-~~~~~~~~~~ 188 (308)
T 1zgk_A 119 VIDG-HIYAVGGSHGC-IHHNSVERYEPERD----EWHLVA--PMLTRRIGVGVAVL-NRLLYAVGGFD-GTNRLNSAEC 188 (308)
T ss_dssp EETT-EEEEECCEETT-EECCCEEEEETTTT----EEEECC--CCSSCCBSCEEEEE-TTEEEEECCBC-SSCBCCCEEE
T ss_pred EECC-EEEEEcCCCCC-cccccEEEECCCCC----eEeECC--CCCccccceEEEEE-CCEEEEEeCCC-CCCcCceEEE
Confidence 9977 99999997543 45789999999999 999998 88999999999999 68999999986 3345889999
Q ss_pred EEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCCCcccccccccccccc
Q 021952 160 LDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGL 239 (305)
Q Consensus 160 ~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 239 (305)
||+.+ ++|+.+. .+|.+|..|++++ .+++|||+||.+.. ...+++++||+.
T Consensus 189 yd~~~--~~W~~~~--------~~p~~r~~~~~~~-~~~~iyv~GG~~~~-~~~~~v~~yd~~----------------- 239 (308)
T 1zgk_A 189 YYPER--NEWRMIT--------AMNTIRSGAGVCV-LHNCIYAAGGYDGQ-DQLNSVERYDVE----------------- 239 (308)
T ss_dssp EETTT--TEEEECC--------CCSSCCBSCEEEE-ETTEEEEECCBCSS-SBCCCEEEEETT-----------------
T ss_pred EeCCC--CeEeeCC--------CCCCccccceEEE-ECCEEEEEeCCCCC-CccceEEEEeCC-----------------
Confidence 99999 9999994 7899999998877 69999999999754 347899999998
Q ss_pred ccccceeecccCcCCCCCceeeeeeeCCCcEEEEEcCccC
Q 021952 240 LLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVD 279 (305)
Q Consensus 240 ~~~~W~~v~~~~~~p~~r~~~~~~~~~~~~~i~v~GG~~~ 279 (305)
+++|+++.. +|.+|..|+++++ +++|||+||...
T Consensus 240 -~~~W~~~~~---~p~~r~~~~~~~~--~~~i~v~GG~~~ 273 (308)
T 1zgk_A 240 -TETWTFVAP---MKHRRSALGITVH--QGRIYVLGGYDG 273 (308)
T ss_dssp -TTEEEECCC---CSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred -CCcEEECCC---CCCCccceEEEEE--CCEEEEEcCcCC
Confidence 889999864 8899999988774 689999999754
No 4
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.8e-37 Score=266.15 Aligned_cols=221 Identities=21% Similarity=0.342 Sum_probs=191.6
Q ss_pred ceEecCCCCCCCCcceeEEEECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEec
Q 021952 3 KWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCID 82 (305)
Q Consensus 3 ~W~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~ 82 (305)
+|++++ ..|.+|.+|+++.++++||++||.... ...+++++||+ .+.+|++++ .+|.+|..|+++.++
T Consensus 41 ~W~~~~-~~p~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~-------~~~~W~~~~---~~p~~r~~~~~~~~~ 108 (302)
T 2xn4_A 41 RWHQVA-ELPSRRCRAGMVYMAGLVFAVGGFNGS-LRVRTVDSYDP-------VKDQWTSVA---NMRDRRSTLGAAVLN 108 (302)
T ss_dssp EEEEEC-CCSSCCBSCEEEEETTEEEEESCBCSS-SBCCCEEEEET-------TTTEEEEEC---CCSSCCBSCEEEEET
T ss_pred cEeEcc-cCCcccccceEEEECCEEEEEeCcCCC-ccccceEEECC-------CCCceeeCC---CCCccccceEEEEEC
Confidence 699986 678899999999999999999998753 45789999999 899999987 367899999999998
Q ss_pred CCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCC-cccceeEEEE
Q 021952 83 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGY-EVLNDVWFLD 161 (305)
Q Consensus 83 ~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~-~~~~~~~~~d 161 (305)
+ +||++||.... ..++++++||+.++ +|++++ ++|.+|..|+++.+ +++||++||..... ...+++++||
T Consensus 109 ~-~iyv~GG~~~~-~~~~~~~~~d~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd 179 (302)
T 2xn4_A 109 G-LLYAVGGFDGS-TGLSSVEAYNIKSN----EWFHVA--PMNTRRSSVGVGVV-GGLLYAVGGYDVASRQCLSTVECYN 179 (302)
T ss_dssp T-EEEEEEEECSS-CEEEEEEEEETTTT----EEEEEC--CCSSCCBSCEEEEE-TTEEEEECCEETTTTEECCCEEEEE
T ss_pred C-EEEEEcCCCCC-ccCceEEEEeCCCC----eEeecC--CCCCcccCceEEEE-CCEEEEEeCCCCCCCccccEEEEEe
Confidence 7 99999998543 46789999999999 999998 88899999999998 58999999985432 4578999999
Q ss_pred ccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCCCcccccccccccccccc
Q 021952 162 VYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLL 241 (305)
Q Consensus 162 ~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 241 (305)
+.+ ++|+.+. .+|.+|..|++++ .+++|||+||.+.. ...+++++||+. +
T Consensus 180 ~~~--~~W~~~~--------~~p~~r~~~~~~~-~~~~iyv~GG~~~~-~~~~~~~~yd~~------------------~ 229 (302)
T 2xn4_A 180 ATT--NEWTYIA--------EMSTRRSGAGVGV-LNNLLYAVGGHDGP-LVRKSVEVYDPT------------------T 229 (302)
T ss_dssp TTT--TEEEEEC--------CCSSCCBSCEEEE-ETTEEEEECCBSSS-SBCCCEEEEETT------------------T
T ss_pred CCC--CcEEECC--------CCccccccccEEE-ECCEEEEECCCCCC-cccceEEEEeCC------------------C
Confidence 999 9999994 7899999998877 79999999998754 457889999998 8
Q ss_pred ccceeecccCcCCCCCceeeeeeeCCCcEEEEEcCccC
Q 021952 242 NMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVD 279 (305)
Q Consensus 242 ~~W~~v~~~~~~p~~r~~~~~~~~~~~~~i~v~GG~~~ 279 (305)
++|+.+.. +|.+|..|+++.. +++|||+||...
T Consensus 230 ~~W~~~~~---~~~~r~~~~~~~~--~~~i~v~GG~~~ 262 (302)
T 2xn4_A 230 NAWRQVAD---MNMCRRNAGVCAV--NGLLYVVGGDDG 262 (302)
T ss_dssp TEEEEECC---CSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred CCEeeCCC---CCCccccCeEEEE--CCEEEEECCcCC
Confidence 89999865 8889998888764 689999999854
No 5
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.8e-37 Score=270.28 Aligned_cols=246 Identities=17% Similarity=0.203 Sum_probs=197.6
Q ss_pred ceEecCCCCCCCCcceeEEEECCEEEEEccccCC-----CCCcccceeecccccccccccceEEecccCCCCCCCCCCce
Q 021952 3 KWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDR-----GNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHA 77 (305)
Q Consensus 3 ~W~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~-----~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~ 77 (305)
+|++.+...|.+|.+|+++.++++||++||...+ ....+++++||+ .+.+|+++. .+|.+|..|+
T Consensus 35 ~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~-------~~~~W~~~~---~~p~~r~~~~ 104 (318)
T 2woz_A 35 ECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDN-------VSSEWVGLP---PLPSARCLFG 104 (318)
T ss_dssp EEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEET-------TTTEEEECS---CBSSCBCSCE
T ss_pred ceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeC-------CCCcEEECC---CCCccccccc
Confidence 6888543346899999999999999999996321 123445999999 899999986 4788999999
Q ss_pred eEEecCCEEEEEeccCC-CCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccce
Q 021952 78 ACCIDNRKMVIHAGIGL-YGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLND 156 (305)
Q Consensus 78 ~~~~~~~~lyv~GG~~~-~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~ 156 (305)
++.+++ +||++||... ....++++++||+.++ +|++++ ++|.+|.+|+++.. +++||++||........++
T Consensus 105 ~~~~~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~ 176 (318)
T 2woz_A 105 LGEVDD-KIYVVAGKDLQTEASLDSVLCYDPVAA----KWSEVK--NLPIKVYGHNVISH-NGMIYCLGGKTDDKKCTNR 176 (318)
T ss_dssp EEEETT-EEEEEEEEBTTTCCEEEEEEEEETTTT----EEEEEC--CCSSCEESCEEEEE-TTEEEEECCEESSSCBCCC
T ss_pred eEEECC-EEEEEcCccCCCCcccceEEEEeCCCC----CEeECC--CCCCcccccEEEEE-CCEEEEEcCCCCCCCccce
Confidence 999987 9999999853 3456889999999999 999998 88999999999998 6899999998656677899
Q ss_pred eEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCCCccccccccccc
Q 021952 157 VWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDS 236 (305)
Q Consensus 157 ~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 236 (305)
+++||+.+ ++|+++. ++|.+|..|++++ .+++|||+||.+.. ...+++++||+.
T Consensus 177 ~~~yd~~~--~~W~~~~--------~~p~~r~~~~~~~-~~~~iyv~GG~~~~-~~~~~~~~yd~~-------------- 230 (318)
T 2woz_A 177 VFIYNPKK--GDWKDLA--------PMKTPRSMFGVAI-HKGKIVIAGGVTED-GLSASVEAFDLK-------------- 230 (318)
T ss_dssp EEEEETTT--TEEEEEC--------CCSSCCBSCEEEE-ETTEEEEEEEEETT-EEEEEEEEEETT--------------
T ss_pred EEEEcCCC--CEEEECC--------CCCCCcccceEEE-ECCEEEEEcCcCCC-CccceEEEEECC--------------
Confidence 99999999 9999994 7899999998877 79999999998754 346789999998
Q ss_pred cccccccceeecccCcCCCCCceeeeeeeCCCcEEEEEcCccCCCcccCCCccccccCceeeEeee
Q 021952 237 RGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELV 302 (305)
Q Consensus 237 ~~~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~d~~~~~~~ 302 (305)
+++|+++.. +|.+|..|+++++ +++|||+||.......... .......++|+||+.
T Consensus 231 ----~~~W~~~~~---~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~-~~~~~~~~v~~yd~~ 286 (318)
T 2woz_A 231 ----TNKWEVMTE---FPQERSSISLVSL--AGSLYAIGGFAMIQLESKE-FAPTEVNDIWKYEDD 286 (318)
T ss_dssp ----TCCEEECCC---CSSCCBSCEEEEE--TTEEEEECCBCCBC----C-CBCCBCCCEEEEETT
T ss_pred ----CCeEEECCC---CCCcccceEEEEE--CCEEEEECCeeccCCCCce-eccceeeeEEEEeCC
Confidence 889999865 8889999988774 5799999998543211111 111234677777754
No 6
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=2.3e-36 Score=261.09 Aligned_cols=221 Identities=19% Similarity=0.275 Sum_probs=191.7
Q ss_pred ceEecCCCCCCCCcceeEEEECCEEEEEccccCCCCCcccceeecccccccccccce---EEecccCCCCCCCCCCceeE
Q 021952 3 KWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLS---WRLLDVGSIAPPARGAHAAC 79 (305)
Q Consensus 3 ~W~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~---W~~~~~~~~~p~~r~~~~~~ 79 (305)
+|++++ ..|.+|.+|+++.++++||++||... ....+++|+||+ .+.+ |+++. .+|.+|..|+++
T Consensus 42 ~W~~~~-~~p~~r~~~~~~~~~~~l~v~GG~~~-~~~~~~~~~~d~-------~~~~~~~W~~~~---~~p~~r~~~~~~ 109 (301)
T 2vpj_A 42 EWSFLP-SITRKRRYVASVSLHDRIYVIGGYDG-RSRLSSVECLDY-------TADEDGVWYSVA---PMNVRRGLAGAT 109 (301)
T ss_dssp EEEECC-CCSSCCBSCEEEEETTEEEEECCBCS-SCBCCCEEEEET-------TCCTTCCCEEEC---CCSSCCBSCEEE
T ss_pred eEEeCC-CCChhhccccEEEECCEEEEEcCCCC-CccCceEEEEEC-------CCCCCCeeEECC---CCCCCccceeEE
Confidence 799997 57889999999999999999999874 456789999999 7888 99986 468899999999
Q ss_pred EecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEE
Q 021952 80 CIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWF 159 (305)
Q Consensus 80 ~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~ 159 (305)
.+++ +||++||.... ..++++++||+.++ +|++++ ++|.+|..|+++.. +++||++||.. .....+++++
T Consensus 110 ~~~~-~lyv~GG~~~~-~~~~~~~~~d~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~iyv~GG~~-~~~~~~~~~~ 179 (301)
T 2vpj_A 110 TLGD-MIYVSGGFDGS-RRHTSMERYDPNID----QWSMLG--DMQTAREGAGLVVA-SGVIYCLGGYD-GLNILNSVEK 179 (301)
T ss_dssp EETT-EEEEECCBCSS-CBCCEEEEEETTTT----EEEEEE--ECSSCCBSCEEEEE-TTEEEEECCBC-SSCBCCCEEE
T ss_pred EECC-EEEEEcccCCC-cccceEEEEcCCCC----eEEECC--CCCCCcccceEEEE-CCEEEEECCCC-CCcccceEEE
Confidence 9976 99999998543 45889999999999 999998 78899999999999 68999999985 4457899999
Q ss_pred EEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCCCcccccccccccccc
Q 021952 160 LDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGL 239 (305)
Q Consensus 160 ~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 239 (305)
||+.+ ++|+.+. .+|.+|..|+++. .+++|||+||.+.. ...+++++||+.
T Consensus 180 ~d~~~--~~W~~~~--------~~p~~r~~~~~~~-~~~~i~v~GG~~~~-~~~~~v~~yd~~----------------- 230 (301)
T 2vpj_A 180 YDPHT--GHWTNVT--------PMATKRSGAGVAL-LNDHIYVVGGFDGT-AHLSSVEAYNIR----------------- 230 (301)
T ss_dssp EETTT--TEEEEEC--------CCSSCCBSCEEEE-ETTEEEEECCBCSS-SBCCCEEEEETT-----------------
T ss_pred EeCCC--CcEEeCC--------CCCcccccceEEE-ECCEEEEEeCCCCC-cccceEEEEeCC-----------------
Confidence 99999 9999994 7899999998877 79999999999754 347899999998
Q ss_pred ccccceeecccCcCCCCCceeeeeeeCCCcEEEEEcCccCC
Q 021952 240 LLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDG 280 (305)
Q Consensus 240 ~~~~W~~v~~~~~~p~~r~~~~~~~~~~~~~i~v~GG~~~~ 280 (305)
+++|+++.. +|.+|..|+++++ +++|||+||....
T Consensus 231 -~~~W~~~~~---~p~~r~~~~~~~~--~~~i~v~GG~~~~ 265 (301)
T 2vpj_A 231 -TDSWTTVTS---MTTPRCYVGATVL--RGRLYAIAGYDGN 265 (301)
T ss_dssp -TTEEEEECC---CSSCCBSCEEEEE--TTEEEEECCBCSS
T ss_pred -CCcEEECCC---CCCcccceeEEEE--CCEEEEEcCcCCC
Confidence 889999864 8899999988774 6899999997543
No 7
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=4.1e-36 Score=260.57 Aligned_cols=216 Identities=17% Similarity=0.163 Sum_probs=177.1
Q ss_pred CCCCCCCcceeEEEECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEE
Q 021952 9 SGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVI 88 (305)
Q Consensus 9 ~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv 88 (305)
...|.+|..|+++.++++||++||. .....+++++||+ .+.+|+.+. .+|.+|..|+++.+++ +||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~i~v~GG~--~~~~~~~~~~~d~-------~~~~W~~~~---~~p~~r~~~~~~~~~~-~lyv 75 (308)
T 1zgk_A 9 HSSGLVPRGSHAPKVGRLIYTAGGY--FRQSLSYLEAYNP-------SNGTWLRLA---DLQVPRSGLAGCVVGG-LLYA 75 (308)
T ss_dssp ------------CCCCCCEEEECCB--SSSBCCCEEEEET-------TTTEEEECC---CCSSCCBSCEEEEETT-EEEE
T ss_pred ccCCeeeCCccccCCCCEEEEEeCc--CCCCcceEEEEcC-------CCCeEeECC---CCCcccccceEEEECC-EEEE
Confidence 3468899999999999999999998 3456889999999 899999985 4788999999998876 9999
Q ss_pred EeccC---CCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEcccc
Q 021952 89 HAGIG---LYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEG 165 (305)
Q Consensus 89 ~GG~~---~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~ 165 (305)
+||.. .....++++++||+.++ +|++++ ++|.+|..|+++.+ +++||++||.. .....+++++||+.+
T Consensus 76 ~GG~~~~~~~~~~~~~~~~~d~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~iyv~GG~~-~~~~~~~~~~yd~~~- 146 (308)
T 1zgk_A 76 VGGRNNSPDGNTDSSALDCYNPMTN----QWSPCA--PMSVPRNRIGVGVI-DGHIYAVGGSH-GCIHHNSVERYEPER- 146 (308)
T ss_dssp ECCEEEETTEEEECCCEEEEETTTT----EEEECC--CCSSCCBTCEEEEE-TTEEEEECCEE-TTEECCCEEEEETTT-
T ss_pred ECCCcCCCCCCeecceEEEECCCCC----eEeECC--CCCcCccccEEEEE-CCEEEEEcCCC-CCcccccEEEECCCC-
Confidence 99973 23345789999999999 999998 88899999999999 68999999985 446788999999999
Q ss_pred ceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCCCccccccccccccccccccce
Q 021952 166 FFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWK 245 (305)
Q Consensus 166 ~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~ 245 (305)
++|+++. ++|.+|..|++++ .+++|||+||.+... ..+++++||+. +++|+
T Consensus 147 -~~W~~~~--------~~p~~r~~~~~~~-~~~~iyv~GG~~~~~-~~~~~~~yd~~------------------~~~W~ 197 (308)
T 1zgk_A 147 -DEWHLVA--------PMLTRRIGVGVAV-LNRLLYAVGGFDGTN-RLNSAECYYPE------------------RNEWR 197 (308)
T ss_dssp -TEEEECC--------CCSSCCBSCEEEE-ETTEEEEECCBCSSC-BCCCEEEEETT------------------TTEEE
T ss_pred -CeEeECC--------CCCccccceEEEE-ECCEEEEEeCCCCCC-cCceEEEEeCC------------------CCeEe
Confidence 9999994 7899999999887 699999999997654 37899999998 88999
Q ss_pred eecccCcCCCCCceeeeeeeCCCcEEEEEcCccCC
Q 021952 246 RLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDG 280 (305)
Q Consensus 246 ~v~~~~~~p~~r~~~~~~~~~~~~~i~v~GG~~~~ 280 (305)
.+.. +|.+|..|+++++ +++|||+||....
T Consensus 198 ~~~~---~p~~r~~~~~~~~--~~~iyv~GG~~~~ 227 (308)
T 1zgk_A 198 MITA---MNTIRSGAGVCVL--HNCIYAAGGYDGQ 227 (308)
T ss_dssp ECCC---CSSCCBSCEEEEE--TTEEEEECCBCSS
T ss_pred eCCC---CCCccccceEEEE--CCEEEEEeCCCCC
Confidence 8865 8899999998775 6899999998643
No 8
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=4.5e-36 Score=265.38 Aligned_cols=228 Identities=21% Similarity=0.267 Sum_probs=178.3
Q ss_pred cceEecCCCCC-CCCcceeEEEECCEEEEEccc-c---CCCCCcccceeecccccccccccceEEecccCCCCCCCCCCc
Q 021952 2 LKWQKVNSGIP-SGRFGHTCVVIGDCLVLFGGI-N---DRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAH 76 (305)
Q Consensus 2 ~~W~~~~~~~p-~~r~~~~~~~~~~~lyv~GG~-~---~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~ 76 (305)
-+|++++. .| .+|.+|++++++++|||+||. . .....++++|+||+ .+.+|+++.... |.+|.+|
T Consensus 43 ~~W~~~~~-~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~-------~~~~W~~~~~~~--p~~r~~~ 112 (357)
T 2uvk_A 43 KKWTALAA-FPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNP-------KTNSWVKLMSHA--PMGMAGH 112 (357)
T ss_dssp CCEEECCC-CTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEET-------TTTEEEECSCCC--SSCCSSE
T ss_pred CCeeECCC-CCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeC-------CCCcEEECCCCC--Ccccccc
Confidence 37999974 56 899999999999999999998 2 12346789999999 899999988643 6899999
Q ss_pred eeEEecCCEEEEEeccCCCC---------------------------------CccCcEEEEeccCCCCCcCeEEcccCC
Q 021952 77 AACCIDNRKMVIHAGIGLYG---------------------------------LRLGDTWVLELSENFCFGSWQQLVTHP 123 (305)
Q Consensus 77 ~~~~~~~~~lyv~GG~~~~~---------------------------------~~~~~~~~~d~~~~~~~~~W~~~~~~~ 123 (305)
+++..++ +||++||..... ..++++++||+.++ +|+.+. +
T Consensus 113 ~~~~~~~-~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~----~W~~~~--~ 185 (357)
T 2uvk_A 113 VTFVHNG-KAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ----QWSYAG--E 185 (357)
T ss_dssp EEEEETT-EEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT----EEEEEE--E
T ss_pred eEEEECC-EEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCC----cEEECC--C
Confidence 9999776 999999974321 23689999999999 999997 6
Q ss_pred CCCccCC-CeeEEEeCCEEEEEcccCCCCcccceeEEEEc--cccceeEEEeccccCCCCCCCCCC--cceeEEEEEeCC
Q 021952 124 SPPARSG-HSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDV--YEGFFKWVQIPYELQNIPAGFSLP--RVGHSATLILGG 198 (305)
Q Consensus 124 ~p~~r~~-~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~--~~~~~~W~~~~~~~~~~~~~~p~~--r~~~~~~~~~~~ 198 (305)
+|.+|.. |+++.. +++|||+||........++++.||+ .+ ++|+.+. .+|.+ |..|++++ .++
T Consensus 186 ~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~--~~W~~~~--------~~~~~~~~~~~~~~~-~~~ 253 (357)
T 2uvk_A 186 SPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNN--LKWNKLA--------PVSSPDGVAGGFAGI-SND 253 (357)
T ss_dssp CSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC-----CEEEECC--------CSSTTTCCBSCEEEE-ETT
T ss_pred CCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCC--CcEEecC--------CCCCCcccccceEEE-ECC
Confidence 7766554 888888 6899999998655556789999987 77 9999994 44444 55776766 799
Q ss_pred EEEEEeccCCCC----------------CccCcEEEEecCCCCccccccccccccccccccceeecccCcCCCCCceeee
Q 021952 199 RVLIYGGEDSAR----------------RRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRA 262 (305)
Q Consensus 199 ~l~v~GG~~~~~----------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~v~~~~~~p~~r~~~~~ 262 (305)
+|||+||.+..+ ...+++++||+. +.+|+++.. +|.+|..|++
T Consensus 254 ~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~------------------~~~W~~~~~---~p~~r~~~~~ 312 (357)
T 2uvk_A 254 SLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH------------------NGKWDKSGE---LSQGRAYGVS 312 (357)
T ss_dssp EEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---------------------CEEEEE---CSSCCBSSEE
T ss_pred EEEEEcCccccCCcccccccceeccccccceeeEEEEecC------------------CCceeeCCC---CCCCccccee
Confidence 999999975321 223678899988 889999855 8999999988
Q ss_pred eeeCCCcEEEEEcCccCCC
Q 021952 263 CPDYSGRYLYVFGGMVDGL 281 (305)
Q Consensus 263 ~~~~~~~~i~v~GG~~~~~ 281 (305)
+. .+++|||+||.....
T Consensus 313 ~~--~~~~i~v~GG~~~~~ 329 (357)
T 2uvk_A 313 LP--WNNSLLIIGGETAGG 329 (357)
T ss_dssp EE--ETTEEEEEEEECGGG
T ss_pred EE--eCCEEEEEeeeCCCC
Confidence 76 468999999986543
No 9
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=258.49 Aligned_cols=219 Identities=18% Similarity=0.211 Sum_probs=188.6
Q ss_pred ceEecCCCCCCCCcceeEEEECCEEEEEcccc--CCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEE
Q 021952 3 KWQKVNSGIPSGRFGHTCVVIGDCLVLFGGIN--DRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACC 80 (305)
Q Consensus 3 ~W~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~ 80 (305)
+|++++ ..|.+|.+|+++.++++||++||.. ......+++++||+ .+.+|+++. .+|.+|..|+++.
T Consensus 78 ~W~~~~-~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~-------~~~~W~~~~---~~p~~r~~~~~~~ 146 (315)
T 4asc_A 78 EWLGMP-PLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDR-------LSFKWGESD---PLPYVVYGHTVLS 146 (315)
T ss_dssp EEEECC-CBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEET-------TTTEEEECC---CCSSCCBSCEEEE
T ss_pred eEEECC-CCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECC-------CCCcEeECC---CCCCcccceeEEE
Confidence 699986 5789999999999999999999986 33567899999999 799999987 3788999999999
Q ss_pred ecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEE
Q 021952 81 IDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFL 160 (305)
Q Consensus 81 ~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~ 160 (305)
+++ +||++||.+.....++++++||+.++ +|++++ ++|.+|..|+++.+ +++|||+||.. .....+++++|
T Consensus 147 ~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~iyv~GG~~-~~~~~~~~~~y 217 (315)
T 4asc_A 147 HMD-LVYVIGGKGSDRKCLNKMCVYDPKKF----EWKELA--PMQTARSLFGATVH-DGRIIVAAGVT-DTGLTSSAEVY 217 (315)
T ss_dssp ETT-EEEEECCBCTTSCBCCCEEEEETTTT----EEEECC--CCSSCCBSCEEEEE-TTEEEEEEEEC-SSSEEEEEEEE
T ss_pred ECC-EEEEEeCCCCCCcccceEEEEeCCCC----eEEECC--CCCCchhceEEEEE-CCEEEEEeccC-CCCccceEEEE
Confidence 887 99999998656667899999999999 999998 78999999999999 58999999985 44578899999
Q ss_pred EccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCC----C----CccCcEEEEecCCCCccccccc
Q 021952 161 DVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSA----R----RRKDDFWVLDTKAIPFTSVQQS 232 (305)
Q Consensus 161 d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~----~----~~~~~~~~~d~~~~~~~~~~~~ 232 (305)
|+.+ ++|+.+. ++|.+|..|+++. .+++|||+||.+.. + ...+++++||++
T Consensus 218 d~~~--~~W~~~~--------~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~---------- 276 (315)
T 4asc_A 218 SITD--NKWAPFE--------AFPQERSSLSLVS-LVGTLYAIGGFATLETESGELVPTELNDIWRYNEE---------- 276 (315)
T ss_dssp ETTT--TEEEEEC--------CCSSCCBSCEEEE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETT----------
T ss_pred ECCC--CeEEECC--------CCCCcccceeEEE-ECCEEEEECCccccCcCCccccccccCcEEEecCC----------
Confidence 9999 9999994 7899999998887 78999999998531 1 246789999998
Q ss_pred cccccccccccceeecccCcCCCCCceeeeeeeCCCcEEEEEcCc
Q 021952 233 MLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGM 277 (305)
Q Consensus 233 ~~~~~~~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~~~i~v~GG~ 277 (305)
+++|+++ .|.+|..|+++++ +++|+++...
T Consensus 277 --------~~~W~~~-----~~~~r~~~~~~~~--~~~l~v~~~~ 306 (315)
T 4asc_A 277 --------EKKWEGV-----LREIAYAAGATFL--PVRLNVLRLT 306 (315)
T ss_dssp --------TTEEEEE-----ESCSSCCSSCEEE--EEEECGGGSE
T ss_pred --------CChhhhh-----ccCCcCccceEEe--CCEEEEEEeh
Confidence 8899988 5677888888774 5789998764
No 10
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-35 Score=257.42 Aligned_cols=217 Identities=17% Similarity=0.225 Sum_probs=187.7
Q ss_pred ceEecCCCCCCCCcceeEEEECCEEEEEccccC-CCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEe
Q 021952 3 KWQKVNSGIPSGRFGHTCVVIGDCLVLFGGIND-RGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCI 81 (305)
Q Consensus 3 ~W~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~-~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~ 81 (305)
+|++++ ..|.+|.+|+++.++++||++||... .....+++|+||+ .+.+|+.+. .+|.+|.+|+++..
T Consensus 89 ~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~-------~~~~W~~~~---~~p~~r~~~~~~~~ 157 (318)
T 2woz_A 89 EWVGLP-PLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDP-------VAAKWSEVK---NLPIKVYGHNVISH 157 (318)
T ss_dssp EEEECS-CBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEET-------TTTEEEEEC---CCSSCEESCEEEEE
T ss_pred cEEECC-CCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeC-------CCCCEeECC---CCCCcccccEEEEE
Confidence 699986 57889999999999999999999863 3456789999999 899999987 36889999999998
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
++ +||++||.......++++++||+.++ +|++++ ++|.+|..|+++++ +++|||+||.. .....+++++||
T Consensus 158 ~~-~iyv~GG~~~~~~~~~~~~~yd~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~iyv~GG~~-~~~~~~~~~~yd 228 (318)
T 2woz_A 158 NG-MIYCLGGKTDDKKCTNRVFIYNPKKG----DWKDLA--PMKTPRSMFGVAIH-KGKIVIAGGVT-EDGLSASVEAFD 228 (318)
T ss_dssp TT-EEEEECCEESSSCBCCCEEEEETTTT----EEEEEC--CCSSCCBSCEEEEE-TTEEEEEEEEE-TTEEEEEEEEEE
T ss_pred CC-EEEEEcCCCCCCCccceEEEEcCCCC----EEEECC--CCCCCcccceEEEE-CCEEEEEcCcC-CCCccceEEEEE
Confidence 77 99999998655567899999999999 999998 88899999999998 58999999986 345678999999
Q ss_pred ccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCC--------CCccCcEEEEecCCCCcccccccc
Q 021952 162 VYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSA--------RRRKDDFWVLDTKAIPFTSVQQSM 233 (305)
Q Consensus 162 ~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~ 233 (305)
+++ ++|+.+. .+|.+|..|++++ .+++|||+||.+.. ....+++|+||++
T Consensus 229 ~~~--~~W~~~~--------~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~----------- 286 (318)
T 2woz_A 229 LKT--NKWEVMT--------EFPQERSSISLVS-LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDD----------- 286 (318)
T ss_dssp TTT--CCEEECC--------CCSSCCBSCEEEE-ETTEEEEECCBCCBC----CCBCCBCCCEEEEETT-----------
T ss_pred CCC--CeEEECC--------CCCCcccceEEEE-ECCEEEEECCeeccCCCCceeccceeeeEEEEeCC-----------
Confidence 999 9999994 7899999998876 78999999998642 1346889999998
Q ss_pred ccccccccccceeecccCcCCCCCceeeeeeeCCCcEEEEEc
Q 021952 234 LDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFG 275 (305)
Q Consensus 234 ~~~~~~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~~~i~v~G 275 (305)
+++|+++ +|.+|+.|+++++ +++|||+.
T Consensus 287 -------~~~W~~~-----~~~~r~~~~~~~~--~~~iyi~~ 314 (318)
T 2woz_A 287 -------KKEWAGM-----LKEIRYASGASCL--ATRLNLFK 314 (318)
T ss_dssp -------TTEEEEE-----ESCCGGGTTCEEE--EEEEEGGG
T ss_pred -------CCEehhh-----cccccccccceee--CCEEEEEE
Confidence 8899988 6788999988774 57899875
No 11
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=3e-34 Score=273.90 Aligned_cols=248 Identities=16% Similarity=0.205 Sum_probs=197.5
Q ss_pred ceEecC-C----CCCCCCcceeEEEE--CCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCC
Q 021952 3 KWQKVN-S----GIPSGRFGHTCVVI--GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGA 75 (305)
Q Consensus 3 ~W~~~~-~----~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~ 75 (305)
+|++++ . ..|.+|.+|+++++ +++|||+||.......++++|+||+ .+++|+.+. .+|.+|..
T Consensus 423 ~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~-------~t~~W~~~~---~~p~~R~~ 492 (695)
T 2zwa_A 423 KIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM-------KTREWSMIK---SLSHTRFR 492 (695)
T ss_dssp CEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET-------TTTEEEECC---CCSBCCBS
T ss_pred eEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC-------CCCcEEECC---CCCCCccc
Confidence 698886 3 36899999999999 9999999999876667899999999 899999986 47889999
Q ss_pred ceeEEecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcc-cCCCCCccCCCeeEEEe-C-CEEEEEcccCCCC-
Q 021952 76 HAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLV-THPSPPARSGHSLTRIG-G-NRTVLFGGRGVGY- 151 (305)
Q Consensus 76 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~-~~~~p~~r~~~~~~~~~-~-~~i~v~GG~~~~~- 151 (305)
|+++++.+++||++||.+... ++++||+.++ +|+.++ .+..|.+|++|++++++ + ++|||+||.....
T Consensus 493 h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~----~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~ 564 (695)
T 2zwa_A 493 HSACSLPDGNVLILGGVTEGP----AMLLYNVTEE----IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQT 564 (695)
T ss_dssp CEEEECTTSCEEEECCBCSSC----SEEEEETTTT----EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSS
T ss_pred ceEEEEcCCEEEEECCCCCCC----CEEEEECCCC----ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCC
Confidence 999997445999999985443 8999999999 999998 45589999999977764 2 7899999985433
Q ss_pred cccceeEEEEcccccee------EEEeccccCCCCCCC-CCCcceeEEEEEeCCEEEEEeccCCCC--CccCcEEEEecC
Q 021952 152 EVLNDVWFLDVYEGFFK------WVQIPYELQNIPAGF-SLPRVGHSATLILGGRVLIYGGEDSAR--RRKDDFWVLDTK 222 (305)
Q Consensus 152 ~~~~~~~~~d~~~~~~~------W~~~~~~~~~~~~~~-p~~r~~~~~~~~~~~~l~v~GG~~~~~--~~~~~~~~~d~~ 222 (305)
...+++++||+.+ ++ |+.+. .. +.+|.+|+++++.+++|||+||.+... ...+++++||+.
T Consensus 565 ~~~~~v~~yd~~~--~~w~~~~~W~~~~--------~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 565 TVSDKAIIFKYDA--ENATEPITVIKKL--------QHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp CBCCEEEEEEECT--TCSSCCEEEEEEE--------ECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred eeeCcEEEEEccC--CccccceEEEEcC--------CCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 6789999999999 88 89885 33 588999999875449999999986554 357899999998
Q ss_pred CCCccccccccccccccccccceeecccCc----CCCCCceeeeeeeCCCcEEEEEcCccCCCcccCCCccccccCceee
Q 021952 223 AIPFTSVQQSMLDSRGLLLNMWKRLRAEGY----KPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLL 298 (305)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~W~~v~~~~~----~p~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~d~~~ 298 (305)
+++|+.+..... .++.+.+|+++.+. +++|||+||...+ ..++..++ ++|+
T Consensus 635 ------------------t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~-~g~i~v~GGg~~c-----fsfGt~~n-~i~~ 689 (695)
T 2zwa_A 635 ------------------SETLTSIPISRRIWEDHSLMLAGFSLVSTS-MGTIHIIGGGATC-----YGFGSVTN-VGLK 689 (695)
T ss_dssp ------------------TTEEEECCCCHHHHHHSCCCCSSCEEECC----CEEEECCEEEC-----TTSCEEEC-CCEE
T ss_pred ------------------CCeEEEeeccccccCCCCccceeeeEEEeC-CCEEEEEeCCccC-----cCcccccc-ceEE
Confidence 889996543211 22367778876643 3389999998544 34554555 9999
Q ss_pred Eeeee
Q 021952 299 VELVP 303 (305)
Q Consensus 299 ~~~~~ 303 (305)
+|+..
T Consensus 690 ldl~~ 694 (695)
T 2zwa_A 690 LIAIA 694 (695)
T ss_dssp EEECC
T ss_pred EEEEc
Confidence 99875
No 12
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=5.6e-34 Score=246.74 Aligned_cols=211 Identities=17% Similarity=0.192 Sum_probs=183.8
Q ss_pred ceEecCCCCCCCCcceeEEEECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEec
Q 021952 3 KWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCID 82 (305)
Q Consensus 3 ~W~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~ 82 (305)
+|++++ ..|.+|.+|+++.++++||++||........+++++||+ .+.+|+.+. .+|.+|..|+++.++
T Consensus 81 ~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~-------~~~~W~~~~---~~p~~r~~~~~~~~~ 149 (306)
T 3ii7_A 81 SWYSKL-GPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDT-------RTESWHTKP---SMLTQRCSHGMVEAN 149 (306)
T ss_dssp EEEEEE-CCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEET-------TTTEEEEEC---CCSSCCBSCEEEEET
T ss_pred eEEECC-CCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeC-------CCCceEeCC---CCcCCcceeEEEEEC
Confidence 699986 578999999999999999999999755667889999999 899999986 378899999999988
Q ss_pred CCEEEEEeccCCCCC---ccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEE
Q 021952 83 NRKMVIHAGIGLYGL---RLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWF 159 (305)
Q Consensus 83 ~~~lyv~GG~~~~~~---~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~ 159 (305)
+ +||++||...... .++++++||+.++ +|+.++ ++|.+|..|+++.+ +++||++||.. .....+++++
T Consensus 150 ~-~iyv~GG~~~~~~~~~~~~~~~~yd~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~i~v~GG~~-~~~~~~~~~~ 220 (306)
T 3ii7_A 150 G-LIYVCGGSLGNNVSGRVLNSCEVYDPATE----TWTELC--PMIEARKNHGLVFV-KDKIFAVGGQN-GLGGLDNVEY 220 (306)
T ss_dssp T-EEEEECCEESCTTTCEECCCEEEEETTTT----EEEEEC--CCSSCCBSCEEEEE-TTEEEEECCEE-TTEEBCCEEE
T ss_pred C-EEEEECCCCCCCCcccccceEEEeCCCCC----eEEECC--CccchhhcceEEEE-CCEEEEEeCCC-CCCCCceEEE
Confidence 7 9999999754433 2899999999999 999998 88999999999999 68999999985 4467889999
Q ss_pred EEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCCCcccccccccccccc
Q 021952 160 LDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGL 239 (305)
Q Consensus 160 ~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 239 (305)
||+.+ ++|+.+. .+|.+|..|++++ .+++|||+||.+.. ...+++++||++
T Consensus 221 yd~~~--~~W~~~~--------~~p~~r~~~~~~~-~~~~i~v~GG~~~~-~~~~~~~~yd~~----------------- 271 (306)
T 3ii7_A 221 YDIKL--NEWKMVS--------PMPWKGVTVKCAA-VGSIVYVLAGFQGV-GRLGHILEYNTE----------------- 271 (306)
T ss_dssp EETTT--TEEEECC--------CCSCCBSCCEEEE-ETTEEEEEECBCSS-SBCCEEEEEETT-----------------
T ss_pred eeCCC--CcEEECC--------CCCCCccceeEEE-ECCEEEEEeCcCCC-eeeeeEEEEcCC-----------------
Confidence 99999 9999994 7899999998887 69999999999754 357899999998
Q ss_pred ccccceeecccCcCCCCCceeeeeeeC
Q 021952 240 LLNMWKRLRAEGYKPNCRSFHRACPDY 266 (305)
Q Consensus 240 ~~~~W~~v~~~~~~p~~r~~~~~~~~~ 266 (305)
+++|+.+.. +|.+|..|+++++.
T Consensus 272 -~~~W~~~~~---~~~~r~~~~~~~~~ 294 (306)
T 3ii7_A 272 -TDKWVANSK---VRAFPVTSCLICVV 294 (306)
T ss_dssp -TTEEEEEEE---EECCSCTTCEEEEE
T ss_pred -CCeEEeCCC---cccccceeEEEEEC
Confidence 889999865 78999989887653
No 13
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.5e-33 Score=243.31 Aligned_cols=204 Identities=18% Similarity=0.245 Sum_probs=175.3
Q ss_pred EECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCCccCc
Q 021952 22 VIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGD 101 (305)
Q Consensus 22 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~ 101 (305)
.++++||++||........+++++||+ .+.+|+.+. .+|.+|..|+++..++ +||++||.. ....+++
T Consensus 12 ~~~~~i~~~GG~~~~~~~~~~~~~~d~-------~~~~W~~~~---~~p~~r~~~~~~~~~~-~l~v~GG~~-~~~~~~~ 79 (301)
T 2vpj_A 12 GANEVLLVVGGFGSQQSPIDVVEKYDP-------KTQEWSFLP---SITRKRRYVASVSLHD-RIYVIGGYD-GRSRLSS 79 (301)
T ss_dssp -CCEEEEEECCEETTTEECCCEEEEET-------TTTEEEECC---CCSSCCBSCEEEEETT-EEEEECCBC-SSCBCCC
T ss_pred cCCCEEEEEeCccCCCcceeEEEEEcC-------CCCeEEeCC---CCChhhccccEEEECC-EEEEEcCCC-CCccCce
Confidence 368899999995444566889999999 899999987 3678999999999887 999999985 3356899
Q ss_pred EEEEeccCCCCCcC---eEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCC
Q 021952 102 TWVLELSENFCFGS---WQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQN 178 (305)
Q Consensus 102 ~~~~d~~~~~~~~~---W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~ 178 (305)
+++||+.++ + |++++ ++|.+|..|+++.+ +++||++||.. .....+++++||+.+ ++|+++.
T Consensus 80 ~~~~d~~~~----~~~~W~~~~--~~p~~r~~~~~~~~-~~~lyv~GG~~-~~~~~~~~~~~d~~~--~~W~~~~----- 144 (301)
T 2vpj_A 80 VECLDYTAD----EDGVWYSVA--PMNVRRGLAGATTL-GDMIYVSGGFD-GSRRHTSMERYDPNI--DQWSMLG----- 144 (301)
T ss_dssp EEEEETTCC----TTCCCEEEC--CCSSCCBSCEEEEE-TTEEEEECCBC-SSCBCCEEEEEETTT--TEEEEEE-----
T ss_pred EEEEECCCC----CCCeeEECC--CCCCCccceeEEEE-CCEEEEEcccC-CCcccceEEEEcCCC--CeEEECC-----
Confidence 999999998 8 99997 88999999999999 58999999986 445688999999999 9999994
Q ss_pred CCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCCCccccccccccccccccccceeecccCcCCCCCc
Q 021952 179 IPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRS 258 (305)
Q Consensus 179 ~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~v~~~~~~p~~r~ 258 (305)
++|.+|..|+++. .+++|||+||.+.. ...+++++||+. +++|+++.. +|.+|.
T Consensus 145 ---~~p~~r~~~~~~~-~~~~iyv~GG~~~~-~~~~~~~~~d~~------------------~~~W~~~~~---~p~~r~ 198 (301)
T 2vpj_A 145 ---DMQTAREGAGLVV-ASGVIYCLGGYDGL-NILNSVEKYDPH------------------TGHWTNVTP---MATKRS 198 (301)
T ss_dssp ---ECSSCCBSCEEEE-ETTEEEEECCBCSS-CBCCCEEEEETT------------------TTEEEEECC---CSSCCB
T ss_pred ---CCCCCcccceEEE-ECCEEEEECCCCCC-cccceEEEEeCC------------------CCcEEeCCC---CCcccc
Confidence 7889999998887 69999999998754 357899999998 889999854 889999
Q ss_pred eeeeeeeCCCcEEEEEcCccCC
Q 021952 259 FHRACPDYSGRYLYVFGGMVDG 280 (305)
Q Consensus 259 ~~~~~~~~~~~~i~v~GG~~~~ 280 (305)
.|+++.+ +++|||+||....
T Consensus 199 ~~~~~~~--~~~i~v~GG~~~~ 218 (301)
T 2vpj_A 199 GAGVALL--NDHIYVVGGFDGT 218 (301)
T ss_dssp SCEEEEE--TTEEEEECCBCSS
T ss_pred cceEEEE--CCEEEEEeCCCCC
Confidence 9988774 6899999998543
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=3.4e-34 Score=253.38 Aligned_cols=219 Identities=19% Similarity=0.199 Sum_probs=173.3
Q ss_pred CCCCCCcceeEEEECCEEEEEccccCCCCCcccceeecccccccccc--cceEEecccCCCCC-CCCCCceeEEecCCEE
Q 021952 10 GIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGI--TLSWRLLDVGSIAP-PARGAHAACCIDNRKM 86 (305)
Q Consensus 10 ~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~--~~~W~~~~~~~~~p-~~r~~~~~~~~~~~~l 86 (305)
.+|.+|.+|++++++++|||+||... +++|+||+ . +.+|+++.. +| .+|..|+++++++ +|
T Consensus 5 ~lP~~r~~~~~~~~~~~iyv~GG~~~-----~~~~~~d~-------~~~~~~W~~~~~---~p~~~R~~~~~~~~~~-~l 68 (357)
T 2uvk_A 5 ETPVPFKSGTGAIDNDTVYIGLGSAG-----TAWYKLDT-------QAKDKKWTALAA---FPGGPRDQATSAFIDG-NL 68 (357)
T ss_dssp CCSSCCCSCEEEEETTEEEEECGGGT-----TCEEEEET-------TSSSCCEEECCC---CTTCCCBSCEEEEETT-EE
T ss_pred CCCccccceEEEEECCEEEEEeCcCC-----CeEEEEcc-------ccCCCCeeECCC---CCCCcCccceEEEECC-EE
Confidence 57889999999999999999999864 37999999 4 489999874 56 7999999999987 99
Q ss_pred EEEeccCC----CCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCC-----------
Q 021952 87 VIHAGIGL----YGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGY----------- 151 (305)
Q Consensus 87 yv~GG~~~----~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~----------- 151 (305)
|++||.+. ....++++++||+.++ +|++++... |.+|.+|+++.. +++||++||.....
T Consensus 69 yv~GG~~~~~~~~~~~~~~v~~yd~~~~----~W~~~~~~~-p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~ 142 (357)
T 2uvk_A 69 YVFGGIGKNSEGLTQVFNDVHKYNPKTN----SWVKLMSHA-PMGMAGHVTFVH-NGKAYVTGGVNQNIFNGYFEDLNEA 142 (357)
T ss_dssp EEECCEEECTTSCEEECCCEEEEETTTT----EEEECSCCC-SSCCSSEEEEEE-TTEEEEEECCCHHHHHHHHHHHHHH
T ss_pred EEEcCCCCCCCccceeeccEEEEeCCCC----cEEECCCCC-CcccccceEEEE-CCEEEEEeCcCCCcCcccccchhhc
Confidence 99999822 2345899999999999 999998322 589999999987 68999999985221
Q ss_pred ----------------------cccceeEEEEccccceeEEEeccccCCCCCCCCCCcce-eEEEEEeCCEEEEEeccCC
Q 021952 152 ----------------------EVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVG-HSATLILGGRVLIYGGEDS 208 (305)
Q Consensus 152 ----------------------~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~-~~~~~~~~~~l~v~GG~~~ 208 (305)
...+++++||+.+ ++|+.+. ++|.+|.. |++++ .+++|||+||.+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~--~~W~~~~--------~~p~~~~~~~~~~~-~~~~iyv~GG~~~ 211 (357)
T 2uvk_A 143 GKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPST--QQWSYAG--------ESPWYGTAGAAVVN-KGDKTWLINGEAK 211 (357)
T ss_dssp TTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTT--TEEEEEE--------ECSSCCCBSCEEEE-ETTEEEEECCEEE
T ss_pred CCcccchhhhhhhhccccccccCCcccEEEEeCCC--CcEEECC--------CCCCCCcccccEEE-ECCEEEEEeeecC
Confidence 2468999999999 9999994 67776555 77766 7999999999977
Q ss_pred CCCccCcEEEEecCCCCccccccccccccccccccceeecccCcCCCCCceeeeeeeCCCcEEEEEcCccCC
Q 021952 209 ARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDG 280 (305)
Q Consensus 209 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~~~i~v~GG~~~~ 280 (305)
.+...++++.||+... +.+|+++... ..|..|..|++++ .+++|||+||....
T Consensus 212 ~~~~~~~v~~~d~d~~----------------~~~W~~~~~~-~~~~~~~~~~~~~--~~~~iyv~GG~~~~ 264 (357)
T 2uvk_A 212 PGLRTDAVFELDFTGN----------------NLKWNKLAPV-SSPDGVAGGFAGI--SNDSLIFAGGAGFK 264 (357)
T ss_dssp TTEECCCEEEEECC-------------------CEEEECCCS-STTTCCBSCEEEE--ETTEEEEECCEECT
T ss_pred CCcccCceEEEEecCC----------------CCcEEecCCC-CCCcccccceEEE--ECCEEEEEcCcccc
Confidence 6666889999987211 8899998652 2344455666665 46899999998543
No 15
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=243.19 Aligned_cols=210 Identities=16% Similarity=0.247 Sum_probs=181.6
Q ss_pred ceEecCCCCCCCCcceeEEEECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEec
Q 021952 3 KWQKVNSGIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCID 82 (305)
Q Consensus 3 ~W~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~ 82 (305)
+|++++ ..|.+|.+|+++.++++||++||... ....+++++||+ .+.+|+.+. .+|.+|..|+++.++
T Consensus 88 ~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~d~-------~~~~W~~~~---~~p~~r~~~~~~~~~ 155 (302)
T 2xn4_A 88 QWTSVA-NMRDRRSTLGAAVLNGLLYAVGGFDG-STGLSSVEAYNI-------KSNEWFHVA---PMNTRRSSVGVGVVG 155 (302)
T ss_dssp EEEEEC-CCSSCCBSCEEEEETTEEEEEEEECS-SCEEEEEEEEET-------TTTEEEEEC---CCSSCCBSCEEEEET
T ss_pred ceeeCC-CCCccccceEEEEECCEEEEEcCCCC-CccCceEEEEeC-------CCCeEeecC---CCCCcccCceEEEEC
Confidence 799997 57889999999999999999999875 345789999999 899999986 367899999999988
Q ss_pred CCEEEEEeccCCCC-CccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEE
Q 021952 83 NRKMVIHAGIGLYG-LRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 83 ~~~lyv~GG~~~~~-~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
+ +||++||..... ..++++++||+.++ +|+.++ ++|.+|..|+++.+ +++||++||.. .....+++++||
T Consensus 156 ~-~iyv~GG~~~~~~~~~~~~~~yd~~~~----~W~~~~--~~p~~r~~~~~~~~-~~~iyv~GG~~-~~~~~~~~~~yd 226 (302)
T 2xn4_A 156 G-LLYAVGGYDVASRQCLSTVECYNATTN----EWTYIA--EMSTRRSGAGVGVL-NNLLYAVGGHD-GPLVRKSVEVYD 226 (302)
T ss_dssp T-EEEEECCEETTTTEECCCEEEEETTTT----EEEEEC--CCSSCCBSCEEEEE-TTEEEEECCBS-SSSBCCCEEEEE
T ss_pred C-EEEEEeCCCCCCCccccEEEEEeCCCC----cEEECC--CCccccccccEEEE-CCEEEEECCCC-CCcccceEEEEe
Confidence 7 999999975443 34789999999999 999997 88899999999998 58999999985 445678999999
Q ss_pred ccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCCCcccccccccccccccc
Q 021952 162 VYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLL 241 (305)
Q Consensus 162 ~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 241 (305)
+++ ++|+.+. .+|.+|..|+++. .+++|||+||.+.. ...+++++||+. +
T Consensus 227 ~~~--~~W~~~~--------~~~~~r~~~~~~~-~~~~i~v~GG~~~~-~~~~~v~~yd~~------------------~ 276 (302)
T 2xn4_A 227 PTT--NAWRQVA--------DMNMCRRNAGVCA-VNGLLYVVGGDDGS-CNLASVEYYNPT------------------T 276 (302)
T ss_dssp TTT--TEEEEEC--------CCSSCCBSCEEEE-ETTEEEEECCBCSS-SBCCCEEEEETT------------------T
T ss_pred CCC--CCEeeCC--------CCCCccccCeEEE-ECCEEEEECCcCCC-cccccEEEEcCC------------------C
Confidence 999 9999994 7889999998876 79999999998653 347889999998 8
Q ss_pred ccceeecccCcCCCCCceeeeeee
Q 021952 242 NMWKRLRAEGYKPNCRSFHRACPD 265 (305)
Q Consensus 242 ~~W~~v~~~~~~p~~r~~~~~~~~ 265 (305)
++|+.+.. .+|.+|..|+++++
T Consensus 277 ~~W~~~~~--~~~~~r~~~~~~~~ 298 (302)
T 2xn4_A 277 DKWTVVSS--CMSTGRSYAGVTVI 298 (302)
T ss_dssp TEEEECSS--CCSSCCBSCEEEEE
T ss_pred CeEEECCc--ccCcccccceEEEe
Confidence 89998852 48899999998775
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=4.5e-33 Score=265.78 Aligned_cols=223 Identities=18% Similarity=0.197 Sum_probs=181.5
Q ss_pred CCCCCCcceeEEEECCEEEEEccccCCCCCcccceeecccccccccccceEEecc-c--CCCCCCCCCCceeEEec-CCE
Q 021952 10 GIPSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLD-V--GSIAPPARGAHAACCID-NRK 85 (305)
Q Consensus 10 ~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~-~--~~~~p~~r~~~~~~~~~-~~~ 85 (305)
..|+.|.++++ +++++|||+||... ...+++|+||+ .+.+|+.+. . .+.+|.+|.+|+++.+. +++
T Consensus 384 ~~p~rr~g~~~-~~~~~iyv~GG~~~--~~~~~v~~yd~-------~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~ 453 (695)
T 2zwa_A 384 CPINRKFGDVD-VAGNDVFYMGGSNP--YRVNEILQLSI-------HYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQ 453 (695)
T ss_dssp CTTCCBSCEEE-ECSSCEEEECCBSS--SBCCCEEEEEE-------CSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTE
T ss_pred CCCCCceeEEE-EECCEEEEECCCCC--CCcCcEEEEEC-------CCCeEEEeccCCCCCCCCccccceEEEEEccCCE
Confidence 45666766554 48999999999876 56789999999 899999988 3 24578999999999993 349
Q ss_pred EEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEcccc
Q 021952 86 MVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEG 165 (305)
Q Consensus 86 lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~ 165 (305)
||++||.+.....++++|+||+.++ +|++++ ++|.+|++|+++.+.+++|||+||..... ++++||+.+
T Consensus 454 lyv~GG~~~~~~~~~dv~~yd~~t~----~W~~~~--~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t- 522 (695)
T 2zwa_A 454 LLLIGGRKAPHQGLSDNWIFDMKTR----EWSMIK--SLSHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTE- 522 (695)
T ss_dssp EEEECCBSSTTCBCCCCEEEETTTT----EEEECC--CCSBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTT-
T ss_pred EEEEcCCCCCCCccccEEEEeCCCC----cEEECC--CCCCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCC-
Confidence 9999998665557899999999999 999998 88999999999997568999999986433 899999999
Q ss_pred ceeEEEeccccCCCCCCCCCCcceeEEEEEe-C-CEEEEEeccCCCC-CccCcEEEEecCCCCccccccccccccccccc
Q 021952 166 FFKWVQIPYELQNIPAGFSLPRVGHSATLIL-G-GRVLIYGGEDSAR-RRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLN 242 (305)
Q Consensus 166 ~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~-~-~~l~v~GG~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 242 (305)
++|+.+. ..+.+|.+|.+|+++++. + ++|||+||....+ ...+++|+||+. ++
T Consensus 523 -~~W~~~~-----~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~------------------~~ 578 (695)
T 2zwa_A 523 -EIFKDVT-----PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYD------------------AE 578 (695)
T ss_dssp -TEEEECC-----CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEEC------------------TT
T ss_pred -CceEEcc-----CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEcc------------------CC
Confidence 9999995 334589999999876643 2 8899999996554 567899999998 55
Q ss_pred c------ceeecccCcCCCCCceeeeeeeCCCcEEEEEcCccCC
Q 021952 243 M------WKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDG 280 (305)
Q Consensus 243 ~------W~~v~~~~~~p~~r~~~~~~~~~~~~~i~v~GG~~~~ 280 (305)
+ |+.+... ++.+|.+|+++++ .+++|||+||....
T Consensus 579 ~w~~~~~W~~~~~~--p~~~R~~~~~~~~-~~~~iyv~GG~~~~ 619 (695)
T 2zwa_A 579 NATEPITVIKKLQH--PLFQRYGSQIKYI-TPRKLLIVGGTSPS 619 (695)
T ss_dssp CSSCCEEEEEEEEC--GGGCCBSCEEEEE-ETTEEEEECCBCSS
T ss_pred ccccceEEEEcCCC--CCCCcccceEEEe-CCCEEEEECCccCC
Confidence 5 8877651 2588999988764 22799999998544
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.94 E-value=2.2e-26 Score=218.95 Aligned_cols=235 Identities=11% Similarity=0.057 Sum_probs=173.2
Q ss_pred ceEecCCCCCCCCcceeEEEE-CCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCC-CceeEE
Q 021952 3 KWQKVNSGIPSGRFGHTCVVI-GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARG-AHAACC 80 (305)
Q Consensus 3 ~W~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~-~~~~~~ 80 (305)
+|++++ ..|.+|..|+++++ +++||++||........+++++||+ .+.+|+.+...+..|.++. .++++.
T Consensus 276 ~W~~~~-~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~-------~t~~W~~~~~~~~~p~~~~~~~~~~~ 347 (656)
T 1k3i_A 276 SWIPGP-DMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSP-------SSKTWTSLPNAKVNPMLTADKQGLYR 347 (656)
T ss_dssp EEEECC-CCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEET-------TTTEEEEETTSCSGGGCCCCTTGGGT
T ss_pred ceeECC-CCCccccccceEEecCCeEEEEeCcccCCcccccceEeCC-------CCCcceeCCCccccccccccccceee
Confidence 699996 57889999999999 9999999996544556789999999 7999999864332233322 233333
Q ss_pred ecCCEEEEEeccCCCC---CccCcEEEEeccCCCCCcCeEEcc-cCCC----CCccCCCeeEEE--eCCEEEEEcccCC-
Q 021952 81 IDNRKMVIHAGIGLYG---LRLGDTWVLELSENFCFGSWQQLV-THPS----PPARSGHSLTRI--GGNRTVLFGGRGV- 149 (305)
Q Consensus 81 ~~~~~lyv~GG~~~~~---~~~~~~~~~d~~~~~~~~~W~~~~-~~~~----p~~r~~~~~~~~--~~~~i~v~GG~~~- 149 (305)
.+ +++|++||.+... ...++++.||+.++ +|.... .... +.++..+++++. .+++||++||...
T Consensus 348 ~~-~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~----~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~ 422 (656)
T 1k3i_A 348 SD-NHAWLFGWKKGSVFQAGPSTAMNWYYTSGS----GDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDY 422 (656)
T ss_dssp TT-CSCCEEECGGGCEEECCSSSEEEEEECSTT----CEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSS
T ss_pred cC-CceEEEECCCCcEEEecCccceeeeecCCc----ceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCC
Confidence 44 4899999974221 23678999999998 887644 1111 223455666652 2689999999732
Q ss_pred -CCcccc---eeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCC-----CCccCcEEEEe
Q 021952 150 -GYEVLN---DVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSA-----RRRKDDFWVLD 220 (305)
Q Consensus 150 -~~~~~~---~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~-----~~~~~~~~~~d 220 (305)
.....+ ++++||+.+ ++|..+. .+.+|.+|..|+++++.+++|||+||.+.. .....++++||
T Consensus 423 ~~~~~~~~~~~v~~yd~~~--~~W~~~~------~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~yd 494 (656)
T 1k3i_A 423 QDSDATTNAHIITLGEPGT--SPNTVFA------SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYV 494 (656)
T ss_dssp SSSBCCCCEEEEECCSTTS--CCEEEEC------TTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEE
T ss_pred CCCCcCCcceEEEcCCCCC--CCeeEEc------cCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEc
Confidence 223344 788999999 9999882 247899999999887559999999998632 23467889999
Q ss_pred cCCCCccccccccccccccccccceeecccCcCCCCCceeeeeeeCCCcEEEEEcCccC
Q 021952 221 TKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVD 279 (305)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~~~i~v~GG~~~ 279 (305)
+. +++|+.+.. +|.+|..|+++++..+++|||+||...
T Consensus 495 p~------------------t~~W~~~~~---~~~~R~~hs~a~ll~dg~v~v~GG~~~ 532 (656)
T 1k3i_A 495 PE------------------QDTFYKQNP---NSIVRVYHSISLLLPDGRVFNGGGGLC 532 (656)
T ss_dssp GG------------------GTEEEECCC---CSSCCCTTEEEEECTTSCEEEEECCCC
T ss_pred CC------------------CCceeecCC---CCCccccccHhhcCCCcEEEecCCCCC
Confidence 88 889998754 889999999877656789999999644
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.94 E-value=1.2e-25 Score=213.95 Aligned_cols=231 Identities=13% Similarity=0.104 Sum_probs=165.2
Q ss_pred ceEecCCCCCCCCcceeEEEE--CCEEEEEccccCCC-----CCcccceeecccccccccccceEEecccCCCCCCCCCC
Q 021952 3 KWQKVNSGIPSGRFGHTCVVI--GDCLVLFGGINDRG-----NRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGA 75 (305)
Q Consensus 3 ~W~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~-----~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~ 75 (305)
+|+.+. |.||..++++++ +++||++||..... ....++++||+ .+++|+.+.. +|.+|..
T Consensus 177 ~W~~~~---~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~-------~t~~w~~~~~---~~~~~~~ 243 (656)
T 1k3i_A 177 RWGPTI---DLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDP-------STGIVSDRTV---TVTKHDM 243 (656)
T ss_dssp EEEEEE---ECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECT-------TTCCBCCCEE---EECSCCC
T ss_pred eeeeec---cCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeC-------CCCcEEeCcc---cCCCCCC
Confidence 677763 456677788877 89999999985421 12457899999 8999998874 4556655
Q ss_pred ce--eEEecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcc
Q 021952 76 HA--ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEV 153 (305)
Q Consensus 76 ~~--~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~ 153 (305)
|+ ++...+++||++||... .++++||+.++ +|++++ ++|.+|..|+++.+.+++||++||.......
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~-----~~v~~yd~~t~----~W~~~~--~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~ 312 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDA-----KKTSLYDSSSD----SWIPGP--DMQVARGYQSSATMSDGRVFTIGGSWSGGVF 312 (656)
T ss_dssp SSCEEEECTTSCEEEECSSST-----TCEEEEEGGGT----EEEECC--CCSSCCSSCEEEECTTSCEEEECCCCCSSSC
T ss_pred ccccccCCCCCCEEEeCCCCC-----CceEEecCcCC----ceeECC--CCCccccccceEEecCCeEEEEeCcccCCcc
Confidence 54 44445569999999743 27999999999 999998 8899999999998856899999996445567
Q ss_pred cceeEEEEccccceeEEEecc----ccCCC-------C-----------CC--------------------------C--
Q 021952 154 LNDVWFLDVYEGFFKWVQIPY----ELQNI-------P-----------AG--------------------------F-- 183 (305)
Q Consensus 154 ~~~~~~~d~~~~~~~W~~~~~----~~~~~-------~-----------~~--------------------------~-- 183 (305)
.+++++||+.+ ++|+.++. +.... . +. .
T Consensus 313 ~~~~e~yd~~t--~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~ 390 (656)
T 1k3i_A 313 EKNGEVYSPSS--KTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQS 390 (656)
T ss_dssp CCCEEEEETTT--TEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEE
T ss_pred cccceEeCCCC--CcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcccc
Confidence 88999999999 99999731 00000 0 00 0
Q ss_pred ----CCCcceeEEEEE--eCCEEEEEeccCCC--CCccC---cEEEEecCCCCccccccccccccccccccceeecccCc
Q 021952 184 ----SLPRVGHSATLI--LGGRVLIYGGEDSA--RRRKD---DFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGY 252 (305)
Q Consensus 184 ----p~~r~~~~~~~~--~~~~l~v~GG~~~~--~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~v~~~~~ 252 (305)
+.++..++++++ .+++|||+||.... ....+ .+++||+. +.+|.++. .+.
T Consensus 391 ~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~------------------~~~W~~~~-~~~ 451 (656)
T 1k3i_A 391 NRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPG------------------TSPNTVFA-SNG 451 (656)
T ss_dssp TTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTT------------------SCCEEEEC-TTC
T ss_pred ccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCC------------------CCCeeEEc-cCC
Confidence 112223444432 47899999997431 12233 56666666 88999886 245
Q ss_pred CCCCCceeeeeeeCCCcEEEEEcCccC
Q 021952 253 KPNCRSFHRACPDYSGRYLYVFGGMVD 279 (305)
Q Consensus 253 ~p~~r~~~~~~~~~~~~~i~v~GG~~~ 279 (305)
+|.+|..|+++++. +++|||+||...
T Consensus 452 mp~~R~~~~~~~l~-~g~i~v~GG~~~ 477 (656)
T 1k3i_A 452 LYFARTFHTSVVLP-DGSTFITGGQRR 477 (656)
T ss_dssp CSSCCBSCEEEECT-TSCEEEECCBSB
T ss_pred CCCCcccCCeEECC-CCCEEEECCccc
Confidence 89999999987753 678999999753
No 19
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.17 E-value=0.071 Score=43.47 Aligned_cols=191 Identities=12% Similarity=0.011 Sum_probs=106.6
Q ss_pred eEEEECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCCc
Q 021952 19 TCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLR 98 (305)
Q Consensus 19 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~ 98 (305)
.....+++||+-.|... .+.+..+|+ .+.+-..-.. +|....+......++ +||+....
T Consensus 25 GL~~~~~~LyestG~~g----~S~v~~vD~-------~tgkv~~~~~---l~~~~fgeGi~~~~~-~ly~ltw~------ 83 (243)
T 3mbr_X 25 GLFYLRGHLYESTGETG----RSSVRKVDL-------ETGRILQRAE---VPPPYFGAGIVAWRD-RLIQLTWR------ 83 (243)
T ss_dssp EEEEETTEEEEEECCTT----SCEEEEEET-------TTCCEEEEEE---CCTTCCEEEEEEETT-EEEEEESS------
T ss_pred cEEEECCEEEEECCCCC----CceEEEEEC-------CCCCEEEEEe---CCCCcceeEEEEeCC-EEEEEEee------
Confidence 55667889999888654 346788999 5655543221 233334455555554 99998653
Q ss_pred cCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeE-EEeccccC
Q 021952 99 LGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKW-VQIPYELQ 177 (305)
Q Consensus 99 ~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W-~~~~~~~~ 177 (305)
.+.+++||.++- + .+. ..+.+..+.+++.. +.++|+.-|. +.++.+|+++ .+- ..++
T Consensus 84 ~~~v~v~D~~tl----~--~~~--ti~~~~~Gwglt~d-g~~L~vSdgs-------~~l~~iDp~t--~~~~~~I~---- 141 (243)
T 3mbr_X 84 NHEGFVYDLATL----T--PRA--RFRYPGEGWALTSD-DSHLYMSDGT-------AVIRKLDPDT--LQQVGSIK---- 141 (243)
T ss_dssp SSEEEEEETTTT----E--EEE--EEECSSCCCEEEEC-SSCEEEECSS-------SEEEEECTTT--CCEEEEEE----
T ss_pred CCEEEEEECCcC----c--EEE--EEeCCCCceEEeeC-CCEEEEECCC-------CeEEEEeCCC--CeEEEEEE----
Confidence 357999999874 2 322 11112244555544 4678887552 4699999988 443 3332
Q ss_pred CCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCCCccccccccccccccccccceeecccCc-----
Q 021952 178 NIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGY----- 252 (305)
Q Consensus 178 ~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~v~~~~~----- 252 (305)
....+.+...-.-....+++||+---. .++|.++|+.+.. -.. .+...+-
T Consensus 142 --V~~~g~~~~~lNeLe~~~G~lyanvw~------s~~I~vIDp~tG~---------------V~~--~idl~~l~~~~~ 196 (243)
T 3mbr_X 142 --VTAGGRPLDNLNELEWVNGELLANVWL------TSRIARIDPASGK---------------VVA--WIDLQALVPDAD 196 (243)
T ss_dssp --CEETTEECCCEEEEEEETTEEEEEETT------TTEEEEECTTTCB---------------EEE--EEECGGGSTTTT
T ss_pred --EccCCcccccceeeEEeCCEEEEEECC------CCeEEEEECCCCC---------------EEE--EEECCcCccccc
Confidence 111122211111112257887754422 4579999998542 112 2222111
Q ss_pred ---CCCCCceeeeeeeCCCcEEEEEcCc
Q 021952 253 ---KPNCRSFHRACPDYSGRYLYVFGGM 277 (305)
Q Consensus 253 ---~p~~r~~~~~~~~~~~~~i~v~GG~ 277 (305)
.+..-...+.+....+++|||.|=.
T Consensus 197 ~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 197 ALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp SCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred cccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 1222244566666667899999944
No 20
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.74 E-value=0.22 Score=42.28 Aligned_cols=164 Identities=8% Similarity=-0.052 Sum_probs=88.5
Q ss_pred CCCCcceeEEEECCEEEEEccccCCCCCcccceeecccccccccccceE-EecccCCCCCCCCCCceeEEecCCEEEEEe
Q 021952 12 PSGRFGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSW-RLLDVGSIAPPARGAHAACCIDNRKMVIHA 90 (305)
Q Consensus 12 p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W-~~~~~~~~~p~~r~~~~~~~~~~~~lyv~G 90 (305)
+.....+.++..++++|+.... .+.+.++|+ .+.+- ..+.. ... .+.++...++++|+..
T Consensus 41 ~lg~~~~~i~~~~~~lyv~~~~------~~~v~viD~-------~t~~~~~~i~~---~~~---p~~i~~~~~g~lyv~~ 101 (328)
T 3dsm_A 41 KLGDVAQSMVIRDGIGWIVVNN------SHVIFAIDI-------NTFKEVGRITG---FTS---PRYIHFLSDEKAYVTQ 101 (328)
T ss_dssp CCBSCEEEEEEETTEEEEEEGG------GTEEEEEET-------TTCCEEEEEEC---CSS---EEEEEEEETTEEEEEE
T ss_pred ccCccceEEEEECCEEEEEEcC------CCEEEEEEC-------cccEEEEEcCC---CCC---CcEEEEeCCCeEEEEE
Confidence 3344456677789999998642 246788888 45444 22321 112 2233332334899976
Q ss_pred ccCCCCCccCcEEEEeccCCCCCcCeE-EcccCCCCC-ccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEcccccee
Q 021952 91 GIGLYGLRLGDTWVLELSENFCFGSWQ-QLVTHPSPP-ARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFK 168 (305)
Q Consensus 91 G~~~~~~~~~~~~~~d~~~~~~~~~W~-~~~~~~~p~-~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~ 168 (305)
.. .+.+.++|+.+. +-. .++.+.... ...-+.++. .++++|+..-. ..+.+.++|+++ .+
T Consensus 102 ~~------~~~v~~iD~~t~----~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~-----~~~~v~viD~~t--~~ 163 (328)
T 3dsm_A 102 IW------DYRIFIINPKTY----EITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWS-----YQNRILKIDTET--DK 163 (328)
T ss_dssp BS------CSEEEEEETTTT----EEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECT-----TCCEEEEEETTT--TE
T ss_pred CC------CCeEEEEECCCC----eEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCC-----CCCEEEEEECCC--Ce
Confidence 42 256899999886 433 233222100 002233444 47899988420 124699999998 54
Q ss_pred EEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCc----cCcEEEEecC
Q 021952 169 WVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRR----KDDFWVLDTK 222 (305)
Q Consensus 169 W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~----~~~~~~~d~~ 222 (305)
..+.- ..+..| +......++++|+.......... .+.++++|+.
T Consensus 164 ~~~~i-----~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~ 211 (328)
T 3dsm_A 164 VVDEL-----TIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE 211 (328)
T ss_dssp EEEEE-----ECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT
T ss_pred EEEEE-----EcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECC
Confidence 43321 012222 12223356788877643211111 3679999987
No 21
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.58 E-value=0.24 Score=40.73 Aligned_cols=191 Identities=13% Similarity=0.056 Sum_probs=103.4
Q ss_pred eeEEEECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCC
Q 021952 18 HTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGL 97 (305)
Q Consensus 18 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~ 97 (305)
+.+...++.||+-.|... .+.+.++|+ .+.+-..-.. ++..-++......++ +||+....
T Consensus 46 qGL~~~~~~LyestG~~g----~S~v~~vD~-------~Tgkv~~~~~---l~~~~FgeGit~~g~-~ly~ltw~----- 105 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG----RSSIRKVDI-------ESGKTLQQIE---LGKRYFGEGISDWKD-KIVGLTWK----- 105 (262)
T ss_dssp EEEEEETTEEEEEEEETT----EEEEEEECT-------TTCCEEEEEE---CCTTCCEEEEEEETT-EEEEEESS-----
T ss_pred ceEEEECCEEEEECCCCC----CceEEEEEC-------CCCcEEEEEe---cCCccceeEEEEeCC-EEEEEEee-----
Confidence 344555788998888653 246778898 5655443222 222223344455554 99998653
Q ss_pred ccCcEEEEeccCCCCCcCe-EEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeE-EEeccc
Q 021952 98 RLGDTWVLELSENFCFGSW-QQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKW-VQIPYE 175 (305)
Q Consensus 98 ~~~~~~~~d~~~~~~~~~W-~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W-~~~~~~ 175 (305)
.+.+++||+++. +- ..++. +-.+..++.- +..+|+.-| .+.++.+|+++ .+- ..++.
T Consensus 106 -~~~v~v~D~~t~----~~~~ti~~-----~~eG~glt~d-g~~L~~SdG-------s~~i~~iDp~T--~~v~~~I~V- 164 (262)
T 3nol_A 106 -NGLGFVWNIRNL----RQVRSFNY-----DGEGWGLTHN-DQYLIMSDG-------TPVLRFLDPES--LTPVRTITV- 164 (262)
T ss_dssp -SSEEEEEETTTC----CEEEEEEC-----SSCCCCEEEC-SSCEEECCS-------SSEEEEECTTT--CSEEEEEEC-
T ss_pred -CCEEEEEECccC----cEEEEEEC-----CCCceEEecC-CCEEEEECC-------CCeEEEEcCCC--CeEEEEEEe-
Confidence 356999999875 32 23321 2234444443 456777644 24699999987 432 33320
Q ss_pred cCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCCCccccccccccccccccccceeecccCc---
Q 021952 176 LQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGY--- 252 (305)
Q Consensus 176 ~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~v~~~~~--- 252 (305)
.....|..... -+.. .+++||+-- . ..++|.++|+++.. -.. .++..+-
T Consensus 165 ---~~~g~~~~~lN-ELe~-~~G~lyan~-w-----~~~~I~vIDp~tG~---------------V~~--~Id~~~L~~~ 216 (262)
T 3nol_A 165 ---TAHGEELPELN-ELEW-VDGEIFANV-W-----QTNKIVRIDPETGK---------------VTG--IIDLNGILAE 216 (262)
T ss_dssp ---EETTEECCCEE-EEEE-ETTEEEEEE-T-----TSSEEEEECTTTCB---------------EEE--EEECTTGGGG
T ss_pred ---ccCCccccccc-eeEE-ECCEEEEEE-c-----cCCeEEEEECCCCc---------------EEE--EEECCcCccc
Confidence 00111211111 1222 477888533 1 24679999998542 111 2222111
Q ss_pred ----CCCCCceeeeeeeCCCcEEEEEcCc
Q 021952 253 ----KPNCRSFHRACPDYSGRYLYVFGGM 277 (305)
Q Consensus 253 ----~p~~r~~~~~~~~~~~~~i~v~GG~ 277 (305)
.+..-...+.+....++++||.|-.
T Consensus 217 ~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 217 AGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp SCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred cccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 1222344666676677899999944
No 22
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.37 E-value=0.34 Score=39.98 Aligned_cols=152 Identities=9% Similarity=-0.085 Sum_probs=83.4
Q ss_pred eeEEEECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCC
Q 021952 18 HTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGL 97 (305)
Q Consensus 18 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~ 97 (305)
+.+...+++||+-.|... .+..+|+ .+.+-..-. .+..-++...+..+ ++||+....
T Consensus 58 qGL~~~~~~Ly~stG~~g------~v~~iD~-------~Tgkv~~~~----l~~~~FgeGit~~g-~~Ly~ltw~----- 114 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG------TLRQLSL-------ESAQPVWME----RLGNIFAEGLASDG-ERLYQLTWT----- 114 (268)
T ss_dssp EEEEEETTEEEEEETTTT------EEEECCS-------SCSSCSEEE----ECTTCCEEEEEECS-SCEEEEESS-----
T ss_pred ceEEEECCEEEEEcCCCC------EEEEEEC-------CCCcEEeEE----CCCCcceeEEEEeC-CEEEEEEcc-----
Confidence 455566888998877643 2777888 444322211 12222334444444 589998553
Q ss_pred ccCcEEEEeccCCCCCcCe-EEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeE-EEeccc
Q 021952 98 RLGDTWVLELSENFCFGSW-QQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKW-VQIPYE 175 (305)
Q Consensus 98 ~~~~~~~~d~~~~~~~~~W-~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W-~~~~~~ 175 (305)
.+.+++||+++. +- ..++ - +..+.+++.. +..+|+.-|. +.++.+|+++ .+- ..++
T Consensus 115 -~~~v~V~D~~Tl----~~~~ti~--~---~~eGwGLt~D-g~~L~vSdGs-------~~l~~iDp~T--~~v~~~I~-- 172 (268)
T 3nok_A 115 -EGLLFTWSGMPP----QRERTTR--Y---SGEGWGLCYW-NGKLVRSDGG-------TMLTFHEPDG--FALVGAVQ-- 172 (268)
T ss_dssp -SCEEEEEETTTT----EEEEEEE--C---SSCCCCEEEE-TTEEEEECSS-------SEEEEECTTT--CCEEEEEE--
T ss_pred -CCEEEEEECCcC----cEEEEEe--C---CCceeEEecC-CCEEEEECCC-------CEEEEEcCCC--CeEEEEEE--
Confidence 356999999875 22 2232 1 2234455554 5788887652 4699999988 443 3332
Q ss_pred cCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCC
Q 021952 176 LQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 224 (305)
Q Consensus 176 ~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~ 224 (305)
...-+.+...-.-....+++||+-- . ..++|.++|+.+.
T Consensus 173 ----V~~~g~~v~~lNeLe~~dG~lyanv-w-----~s~~I~vIDp~TG 211 (268)
T 3nok_A 173 ----VKLRGQPVELINELECANGVIYANI-W-----HSSDVLEIDPATG 211 (268)
T ss_dssp ----CEETTEECCCEEEEEEETTEEEEEE-T-----TCSEEEEECTTTC
T ss_pred ----eCCCCcccccccccEEeCCEEEEEE-C-----CCCeEEEEeCCCC
Confidence 1111111111111122477877532 1 2467999999854
No 23
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.02 E-value=0.59 Score=39.53 Aligned_cols=158 Identities=10% Similarity=-0.013 Sum_probs=82.0
Q ss_pred eEEE-ECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCC-CCCCCceeEEecCCEEEEEeccCCCC
Q 021952 19 TCVV-IGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAP-PARGAHAACCIDNRKMVIHAGIGLYG 96 (305)
Q Consensus 19 ~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p-~~r~~~~~~~~~~~~lyv~GG~~~~~ 96 (305)
.++. -++++|+.... .+.+.++|+ .+.+-...-..+... .....+.++. .++++|+..- +
T Consensus 88 ~i~~~~~g~lyv~~~~------~~~v~~iD~-------~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~-~--- 149 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIW------DYRIFIINP-------KTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCW-S--- 149 (328)
T ss_dssp EEEEEETTEEEEEEBS------CSEEEEEET-------TTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEEC-T---
T ss_pred EEEEeCCCeEEEEECC------CCeEEEEEC-------CCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcC-C---
Confidence 4444 57788887532 246888888 555433211112100 0002223333 4558998742 0
Q ss_pred CccCcEEEEeccCCCCCcCeEE-cccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcc----cceeEEEEccccceeEEE
Q 021952 97 LRLGDTWVLELSENFCFGSWQQ-LVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEV----LNDVWFLDVYEGFFKWVQ 171 (305)
Q Consensus 97 ~~~~~~~~~d~~~~~~~~~W~~-~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~----~~~~~~~d~~~~~~~W~~ 171 (305)
..+.+.++|++++ +... ++.+..| +.++...++++|+.......... .+.++++|+.+ .+..+
T Consensus 150 -~~~~v~viD~~t~----~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t--~~v~~ 217 (328)
T 3dsm_A 150 -YQNRILKIDTETD----KVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET--FTVEK 217 (328)
T ss_dssp -TCCEEEEEETTTT----EEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT--TEEEE
T ss_pred -CCCEEEEEECCCC----eEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC--CeEEE
Confidence 1346999999986 5433 3222222 34445556788877532211111 36799999988 65543
Q ss_pred eccccCCCCCCCCCCcceeEEEEE-eCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 172 IPYELQNIPAGFSLPRVGHSATLI-LGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 172 ~~~~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
.- ..+....-...+.. .++.+|+..+ .++++|+.+
T Consensus 218 ~~--------~~~~g~~p~~la~~~d~~~lyv~~~---------~v~~~d~~t 253 (328)
T 3dsm_A 218 QF--------KFKLGDWPSEVQLNGTRDTLYWINN---------DIWRMPVEA 253 (328)
T ss_dssp EE--------ECCTTCCCEEEEECTTSCEEEEESS---------SEEEEETTC
T ss_pred EE--------ecCCCCCceeEEEecCCCEEEEEcc---------EEEEEECCC
Confidence 21 12211111223332 2567888654 589999873
No 24
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.96 E-value=0.35 Score=39.37 Aligned_cols=105 Identities=14% Similarity=0.165 Sum_probs=67.1
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
.++.+|+..|... .+.+..+|++++ +-..-. ..+...++..++.. ++++|+..... +.+++||
T Consensus 29 ~~~~LyestG~~g----~S~v~~vD~~tg----kv~~~~--~l~~~~fgeGi~~~-~~~ly~ltw~~------~~v~v~D 91 (243)
T 3mbr_X 29 LRGHLYESTGETG----RSSVRKVDLETG----RILQRA--EVPPPYFGAGIVAW-RDRLIQLTWRN------HEGFVYD 91 (243)
T ss_dssp ETTEEEEEECCTT----SCEEEEEETTTC----CEEEEE--ECCTTCCEEEEEEE-TTEEEEEESSS------SEEEEEE
T ss_pred ECCEEEEECCCCC----CceEEEEECCCC----CEEEEE--eCCCCcceeEEEEe-CCEEEEEEeeC------CEEEEEE
Confidence 3458999888522 356899999997 443332 44444456666777 58999986553 5799999
Q ss_pred ccccceeE-EEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCC
Q 021952 162 VYEGFFKW-VQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 224 (305)
Q Consensus 162 ~~~~~~~W-~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~ 224 (305)
.++ .+- .++ +.+..+-..+. .+++||+.-|. +.++++|+++.
T Consensus 92 ~~t--l~~~~ti-----------~~~~~Gwglt~-dg~~L~vSdgs-------~~l~~iDp~t~ 134 (243)
T 3mbr_X 92 LAT--LTPRARF-----------RYPGEGWALTS-DDSHLYMSDGT-------AVIRKLDPDTL 134 (243)
T ss_dssp TTT--TEEEEEE-----------ECSSCCCEEEE-CSSCEEEECSS-------SEEEEECTTTC
T ss_pred CCc--CcEEEEE-----------eCCCCceEEee-CCCEEEEECCC-------CeEEEEeCCCC
Confidence 988 433 233 22223333433 56778887662 24899998853
No 25
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.71 E-value=0.71 Score=38.09 Aligned_cols=157 Identities=12% Similarity=0.046 Sum_probs=84.5
Q ss_pred eeEEEEC-CEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCC
Q 021952 18 HTCVVIG-DCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYG 96 (305)
Q Consensus 18 ~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~ 96 (305)
+.+...+ ++||+..|... .+.+.++|+ .+.+-..-.. .+....+...+..+ +++|+..-.
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~-------~tg~v~~~i~---l~~~~fgeGi~~~g-~~lyv~t~~---- 84 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG----RSSVRQVAL-------QTGKVENIHK---MDDSYFGEGLTLLN-EKLYQVVWL---- 84 (266)
T ss_dssp EEEEECSTTEEEEEECSTT----TCEEEEEET-------TTCCEEEEEE---CCTTCCEEEEEEET-TEEEEEETT----
T ss_pred ccEEEeCCCeEEEECCCCC----CCEEEEEEC-------CCCCEEEEEe---cCCCcceEEEEEeC-CEEEEEEec----
Confidence 4555555 78999876432 346888999 5655443221 12222334444444 489998542
Q ss_pred CccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeE-EEeccc
Q 021952 97 LRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKW-VQIPYE 175 (305)
Q Consensus 97 ~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W-~~~~~~ 175 (305)
.+.+++||+++.. .-..++.+ .| .+..++. .+.++|+.-| .+.++++|+++ .+- ..++.
T Consensus 85 --~~~v~viD~~t~~---v~~~i~~g-~~---~g~glt~-Dg~~l~vs~g-------s~~l~viD~~t--~~v~~~I~V- 144 (266)
T 2iwa_A 85 --KNIGFIYDRRTLS---NIKNFTHQ-MK---DGWGLAT-DGKILYGSDG-------TSILYEIDPHT--FKLIKKHNV- 144 (266)
T ss_dssp --CSEEEEEETTTTE---EEEEEECC-SS---SCCEEEE-CSSSEEEECS-------SSEEEEECTTT--CCEEEEEEC-
T ss_pred --CCEEEEEECCCCc---EEEEEECC-CC---CeEEEEE-CCCEEEEECC-------CCeEEEEECCC--CcEEEEEEE-
Confidence 3569999998750 12233322 12 2223333 3467887644 35799999988 443 33320
Q ss_pred cCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCC
Q 021952 176 LQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 224 (305)
Q Consensus 176 ~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~ 224 (305)
.....|..+... ... .++++|+--.. .++|.++|+.+.
T Consensus 145 ---g~~~~p~~~~ne-le~-~dg~lyvn~~~------~~~V~vID~~tg 182 (266)
T 2iwa_A 145 ---KYNGHRVIRLNE-LEY-INGEVWANIWQ------TDCIARISAKDG 182 (266)
T ss_dssp ---EETTEECCCEEE-EEE-ETTEEEEEETT------SSEEEEEETTTC
T ss_pred ---CCCCccccccee-EEE-ECCEEEEecCC------CCeEEEEECCCC
Confidence 000112112222 222 37788765422 457999999853
No 26
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.03 E-value=1.5 Score=37.57 Aligned_cols=158 Identities=10% Similarity=0.031 Sum_probs=82.8
Q ss_pred eEEEECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCC---CCCCCceeEEecCCEEEEEeccCCC
Q 021952 19 TCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAP---PARGAHAACCIDNRKMVIHAGIGLY 95 (305)
Q Consensus 19 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p---~~r~~~~~~~~~~~~lyv~GG~~~~ 95 (305)
+.++.+++||+... ...++++|.. ..+..|+.-....... ......+...+.++.+|+...
T Consensus 48 ~p~v~~~~v~~~~~-------~g~v~a~d~~-----tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---- 111 (376)
T 3q7m_A 48 HPALADNVVYAADR-------AGLVKALNAD-----DGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE---- 111 (376)
T ss_dssp CCEEETTEEEEECT-------TSEEEEEETT-----TCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET----
T ss_pred ccEEECCEEEEEcC-------CCeEEEEEcc-----CCceeeeecCccccccccccCcccccCceEeCCEEEEEcC----
Confidence 56677899998643 1257888871 1245677533211000 011122333344557887532
Q ss_pred CCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccc
Q 021952 96 GLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYE 175 (305)
Q Consensus 96 ~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~ 175 (305)
...++.+|.+++ ...|+.-.... ...+.+.. ++.+|+.... ..++.||.+++...|+.-.
T Consensus 112 ---~g~l~a~d~~tG--~~~W~~~~~~~-----~~~~p~~~-~~~v~v~~~~-------g~l~~~d~~tG~~~W~~~~-- 171 (376)
T 3q7m_A 112 ---KAQVYALNTSDG--TVAWQTKVAGE-----ALSRPVVS-DGLVLIHTSN-------GQLQALNEADGAVKWTVNL-- 171 (376)
T ss_dssp ---TSEEEEEETTTC--CEEEEEECSSC-----CCSCCEEE-TTEEEEECTT-------SEEEEEETTTCCEEEEEEC--
T ss_pred ---CCEEEEEECCCC--CEEEEEeCCCc-----eEcCCEEE-CCEEEEEcCC-------CeEEEEECCCCcEEEEEeC--
Confidence 146899999875 24576543111 12223334 5677764432 3599999988767898763
Q ss_pred cCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCC
Q 021952 176 LQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 224 (305)
Q Consensus 176 ~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~ 224 (305)
.......+...+.++ .++.+|+ |.. ...++.||+.+.
T Consensus 172 ----~~~~~~~~~~~~~~~-~~~~v~~-g~~------~g~l~~~d~~tG 208 (376)
T 3q7m_A 172 ----DMPSLSLRGESAPTT-AFGAAVV-GGD------NGRVSAVLMEQG 208 (376)
T ss_dssp ----CC-----CCCCCCEE-ETTEEEE-CCT------TTEEEEEETTTC
T ss_pred ----CCCceeecCCCCcEE-ECCEEEE-EcC------CCEEEEEECCCC
Confidence 111111111122333 5676655 332 235889998765
No 27
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.60 E-value=0.74 Score=37.82 Aligned_cols=104 Identities=10% Similarity=0.092 Sum_probs=64.6
Q ss_pred CCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEc
Q 021952 83 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDV 162 (305)
Q Consensus 83 ~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~ 162 (305)
++.||+..|... .+.+.++|++++ +-..-. ..+...++..++.. ++++|+.-... +.+++||+
T Consensus 52 ~~~LyestG~~g----~S~v~~vD~~Tg----kv~~~~--~l~~~~FgeGit~~-g~~ly~ltw~~------~~v~v~D~ 114 (262)
T 3nol_A 52 NGYFYESTGLNG----RSSIRKVDIESG----KTLQQI--ELGKRYFGEGISDW-KDKIVGLTWKN------GLGFVWNI 114 (262)
T ss_dssp TTEEEEEEEETT----EEEEEEECTTTC----CEEEEE--ECCTTCCEEEEEEE-TTEEEEEESSS------SEEEEEET
T ss_pred CCEEEEECCCCC----CceEEEEECCCC----cEEEEE--ecCCccceeEEEEe-CCEEEEEEeeC------CEEEEEEC
Confidence 459999988622 346899999997 433322 33333345556666 57999986543 57999999
Q ss_pred cccceeE-EEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCC
Q 021952 163 YEGFFKW-VQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 224 (305)
Q Consensus 163 ~~~~~~W-~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~ 224 (305)
++ .+- .+++ .+-.+-..+. .++.||+.-|. +.++++|+++.
T Consensus 115 ~t--~~~~~ti~-----------~~~eG~glt~-dg~~L~~SdGs-------~~i~~iDp~T~ 156 (262)
T 3nol_A 115 RN--LRQVRSFN-----------YDGEGWGLTH-NDQYLIMSDGT-------PVLRFLDPESL 156 (262)
T ss_dssp TT--CCEEEEEE-----------CSSCCCCEEE-CSSCEEECCSS-------SEEEEECTTTC
T ss_pred cc--CcEEEEEE-----------CCCCceEEec-CCCEEEEECCC-------CeEEEEcCCCC
Confidence 88 443 2332 1123233333 56678887652 34899998853
No 28
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=94.10 E-value=0.9 Score=37.43 Aligned_cols=103 Identities=10% Similarity=0.042 Sum_probs=62.8
Q ss_pred ecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEE
Q 021952 81 IDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFL 160 (305)
Q Consensus 81 ~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~ 160 (305)
+.++.||+..|. .+ .+.++|++++ +-..- . .+...++..++.. ++++|+....+ +.+++|
T Consensus 62 ~~~~~Ly~stG~--~g----~v~~iD~~Tg----kv~~~-~--l~~~~FgeGit~~-g~~Ly~ltw~~------~~v~V~ 121 (268)
T 3nok_A 62 FHQGHFFESTGH--QG----TLRQLSLESA----QPVWM-E--RLGNIFAEGLASD-GERLYQLTWTE------GLLFTW 121 (268)
T ss_dssp EETTEEEEEETT--TT----EEEECCSSCS----SCSEE-E--ECTTCCEEEEEEC-SSCEEEEESSS------CEEEEE
T ss_pred EECCEEEEEcCC--CC----EEEEEECCCC----cEEeE-E--CCCCcceeEEEEe-CCEEEEEEccC------CEEEEE
Confidence 345599998885 22 2889999987 32111 1 2223344456666 57999986543 579999
Q ss_pred EccccceeE-EEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCC
Q 021952 161 DVYEGFFKW-VQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 224 (305)
Q Consensus 161 d~~~~~~~W-~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~ 224 (305)
|+++ .+- .+++ . +-.+-..+. .++.||+.-|. +.++++|+++.
T Consensus 122 D~~T--l~~~~ti~---------~--~~eGwGLt~-Dg~~L~vSdGs-------~~l~~iDp~T~ 165 (268)
T 3nok_A 122 SGMP--PQRERTTR---------Y--SGEGWGLCY-WNGKLVRSDGG-------TMLTFHEPDGF 165 (268)
T ss_dssp ETTT--TEEEEEEE---------C--SSCCCCEEE-ETTEEEEECSS-------SEEEEECTTTC
T ss_pred ECCc--CcEEEEEe---------C--CCceeEEec-CCCEEEEECCC-------CEEEEEcCCCC
Confidence 9988 433 3332 1 112233333 67888888762 25899998853
No 29
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.04 E-value=1.9 Score=35.47 Aligned_cols=111 Identities=11% Similarity=0.067 Sum_probs=65.3
Q ss_pred ceeEEecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccc
Q 021952 76 HAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLN 155 (305)
Q Consensus 76 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~ 155 (305)
|.+....++.+|+..|.. ..+.+.++|+.++ +-...- +.+...++..++.. ++++|+..-. .+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~----~~s~v~~iD~~tg----~v~~~i--~l~~~~fgeGi~~~-g~~lyv~t~~------~~ 86 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLY----GRSSVRQVALQTG----KVENIH--KMDDSYFGEGLTLL-NEKLYQVVWL------KN 86 (266)
T ss_dssp EEEEECSTTEEEEEECST----TTCEEEEEETTTC----CEEEEE--ECCTTCCEEEEEEE-TTEEEEEETT------CS
T ss_pred ccEEEeCCCeEEEECCCC----CCCEEEEEECCCC----CEEEEE--ecCCCcceEEEEEe-CCEEEEEEec------CC
Confidence 455555546999987741 1356999999997 433221 22223344455566 5799998543 25
Q ss_pred eeEEEEccccceeE-EEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 156 DVWFLDVYEGFFKW-VQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 156 ~~~~~d~~~~~~~W-~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
.++++|+.+ .+= .+++ .+ .|. +-..+. .++++|+.-| .+.++++|+.+
T Consensus 87 ~v~viD~~t--~~v~~~i~------~g-~~~---g~glt~-Dg~~l~vs~g-------s~~l~viD~~t 135 (266)
T 2iwa_A 87 IGFIYDRRT--LSNIKNFT------HQ-MKD---GWGLAT-DGKILYGSDG-------TSILYEIDPHT 135 (266)
T ss_dssp EEEEEETTT--TEEEEEEE------CC-SSS---CCEEEE-CSSSEEEECS-------SSEEEEECTTT
T ss_pred EEEEEECCC--CcEEEEEE------CC-CCC---eEEEEE-CCCEEEEECC-------CCeEEEEECCC
Confidence 699999987 432 2332 11 122 122322 5677888654 34699999884
No 30
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=93.75 E-value=2.9 Score=35.64 Aligned_cols=103 Identities=10% Similarity=0.071 Sum_probs=52.3
Q ss_pred CCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCC-EEEEEcccCCCCcccceeEEEE
Q 021952 83 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGN-RTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 83 ~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~-~i~v~GG~~~~~~~~~~~~~~d 161 (305)
++.+|+.++.+ ..+.++|+.++ +...... ... .-.+++...++ .+++.+... ..+.++|
T Consensus 43 g~~l~~~~~~d------~~i~v~d~~~~----~~~~~~~--~~~--~v~~~~~spdg~~l~~~~~~~------~~v~v~d 102 (391)
T 1l0q_A 43 GTKVYVANAHS------NDVSIIDTATN----NVIATVP--AGS--SPQGVAVSPDGKQVYVTNMAS------STLSVID 102 (391)
T ss_dssp SSEEEEEEGGG------TEEEEEETTTT----EEEEEEE--CSS--SEEEEEECTTSSEEEEEETTT------TEEEEEE
T ss_pred CCEEEEECCCC------CeEEEEECCCC----eEEEEEE--CCC--CccceEECCCCCEEEEEECCC------CEEEEEE
Confidence 34577766542 35899999876 4433221 111 11233333334 455554332 3599999
Q ss_pred ccccceeEEEeccccCCCCCCCCCCcceeEEEEEeC-CEEEEEeccCCCCCccCcEEEEecCC
Q 021952 162 VYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILG-GRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 162 ~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~-~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
+.+ ++..... ... ..........+ ..+|+.++.+ +.+.++|+.+
T Consensus 103 ~~~--~~~~~~~--------~~~--~~~~~~~~s~dg~~l~~~~~~~------~~v~~~d~~~ 147 (391)
T 1l0q_A 103 TTS--NTVAGTV--------KTG--KSPLGLALSPDGKKLYVTNNGD------KTVSVINTVT 147 (391)
T ss_dssp TTT--TEEEEEE--------ECS--SSEEEEEECTTSSEEEEEETTT------TEEEEEETTT
T ss_pred CCC--CeEEEEE--------eCC--CCcceEEECCCCCEEEEEeCCC------CEEEEEECCC
Confidence 988 5443331 111 11122222223 4566776543 3589999873
No 31
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=93.00 E-value=3.6 Score=34.64 Aligned_cols=158 Identities=11% Similarity=0.063 Sum_probs=77.5
Q ss_pred cceEecCCCCCCCCcceeEEE-ECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEE
Q 021952 2 LKWQKVNSGIPSGRFGHTCVV-IGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACC 80 (305)
Q Consensus 2 ~~W~~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~ 80 (305)
-+|+++....+.+-....++. -++++|+.|.. + .+++-+= .-.+|+++... .+...+.+..
T Consensus 109 ~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---g----~v~~S~D-------gG~tW~~~~~~----~~~~~~~~~~ 170 (327)
T 2xbg_A 109 QSWSQIPLDPKLPGSPRLIKALGNGSAEMITNV---G----AIYRTKD-------SGKNWQALVQE----AIGVMRNLNR 170 (327)
T ss_dssp SSCEECCCCTTCSSCEEEEEEEETTEEEEEETT---C----CEEEESS-------TTSSEEEEECS----CCCCEEEEEE
T ss_pred CCceECccccCCCCCeEEEEEECCCCEEEEeCC---c----cEEEEcC-------CCCCCEEeecC----CCcceEEEEE
Confidence 479998633222222233443 35778877631 1 2332111 35679987632 2223344444
Q ss_pred ecCCEEEEEeccCCCCCccCcEEEEecc-CCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEE
Q 021952 81 IDNRKMVIHAGIGLYGLRLGDTWVLELS-ENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWF 159 (305)
Q Consensus 81 ~~~~~lyv~GG~~~~~~~~~~~~~~d~~-~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~ 159 (305)
..++.++++|-. + .+++-+-. -. .|+.+.. +.+...+.++...++.+|+.+... .+++
T Consensus 171 ~~~~~~~~~g~~---G----~~~~S~d~gG~----tW~~~~~---~~~~~~~~~~~~~~g~~~~~~~~G-------~~~~ 229 (327)
T 2xbg_A 171 SPSGEYVAVSSR---G----SFYSTWEPGQT----AWEPHNR---TTSRRLHNMGFTPDGRLWMIVNGG-------KIAF 229 (327)
T ss_dssp CTTSCEEEEETT---S----SEEEEECTTCS----SCEEEEC---CSSSCEEEEEECTTSCEEEEETTT-------EEEE
T ss_pred cCCCcEEEEECC---C----cEEEEeCCCCC----ceeECCC---CCCCccceeEECCCCCEEEEeCCc-------eEEE
Confidence 445567766532 1 24444322 33 8999852 223344455555566788776421 2444
Q ss_pred EEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEec
Q 021952 160 LDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGG 205 (305)
Q Consensus 160 ~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG 205 (305)
.+.+ +..+|+.+. .+.++.....+......++.+|+.|+
T Consensus 230 s~~D-~G~tW~~~~------~~~~~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 230 SDPD-NSENWGELL------SPLRRNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp EETT-EEEEECCCB------CTTSSCCSCEEEEEESSSSCEEEEES
T ss_pred ecCC-CCCeeEecc------CCcccCCcceEEEEecCCCEEEEEeC
Confidence 3222 137899873 11123222223332223577888876
No 32
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=92.97 E-value=3.5 Score=34.63 Aligned_cols=64 Identities=14% Similarity=0.245 Sum_probs=35.3
Q ss_pred CEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeC--CEEEEEcccCCCCcccceeEEEE
Q 021952 84 RKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGG--NRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 84 ~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~--~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
+.+++.|+.+ ..+.++|+.++ +|..+..-... ...-.++....+ +.+++.|+.+ ..+..+|
T Consensus 69 ~~~l~s~~~d------g~v~iwd~~~~----~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~d------~~i~v~d 131 (379)
T 3jrp_A 69 GTILASCSYD------GKVLIWKEENG----RWSQIAVHAVH-SASVNSVQWAPHEYGPLLLVASSD------GKVSVVE 131 (379)
T ss_dssp CSEEEEEETT------SCEEEEEEETT----EEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETT------SEEEEEE
T ss_pred CCEEEEeccC------CEEEEEEcCCC----ceeEeeeecCC-CcceEEEEeCCCCCCCEEEEecCC------CcEEEEe
Confidence 3677777652 34888999887 77665511111 111122333333 4566666653 2578888
Q ss_pred ccc
Q 021952 162 VYE 164 (305)
Q Consensus 162 ~~~ 164 (305)
+.+
T Consensus 132 ~~~ 134 (379)
T 3jrp_A 132 FKE 134 (379)
T ss_dssp CCT
T ss_pred cCC
Confidence 876
No 33
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=92.93 E-value=4.2 Score=35.15 Aligned_cols=109 Identities=9% Similarity=-0.084 Sum_probs=53.0
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCc--ccceeEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYE--VLNDVWF 159 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~--~~~~~~~ 159 (305)
+++.+|+.++. + ..+.++|+.+. +..... ... ..-.+++...+++.+++++...... .-..+.+
T Consensus 222 ~~~~l~~~~~~--~----~~i~~~d~~~~----~~~~~~--~~~--~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~ 287 (433)
T 3bws_A 222 IRDLVYCSNWI--S----EDISVIDRKTK----LEIRKT--DKI--GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGI 287 (433)
T ss_dssp TTTEEEEEETT--T----TEEEEEETTTT----EEEEEC--CCC--SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEE
T ss_pred CCCEEEEEecC--C----CcEEEEECCCC----cEEEEe--cCC--CCceEEEEcCCCCEEEEEECCCCccccCCCeEEE
Confidence 34456666543 1 35899999876 443322 111 1123334433454555554422111 1236889
Q ss_pred EEccccceeEEEeccccCCCCCCCCCCcceeEEEEEe-CCEEEEEeccCCCCCccCcEEEEecC
Q 021952 160 LDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLIL-GGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 160 ~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
||+.+ .+-.... ..+. ...+ .+... ++.+|+.++.+ ..+.++|+.
T Consensus 288 ~d~~~--~~~~~~~--------~~~~-~~~~-~~~~~~g~~l~~~~~~~------~~v~v~d~~ 333 (433)
T 3bws_A 288 YSMDK--EKLIDTI--------GPPG-NKRH-IVSGNTENKIYVSDMCC------SKIEVYDLK 333 (433)
T ss_dssp EETTT--TEEEEEE--------EEEE-CEEE-EEECSSTTEEEEEETTT------TEEEEEETT
T ss_pred EECCC--CcEEeec--------cCCC-Ccce-EEECCCCCEEEEEecCC------CEEEEEECC
Confidence 99987 4333221 1111 1111 22212 34677776653 358899987
No 34
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=92.64 E-value=4.1 Score=34.32 Aligned_cols=157 Identities=15% Similarity=0.162 Sum_probs=76.6
Q ss_pred cceEecCCCCCCCC-cceeEEEECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEE
Q 021952 2 LKWQKVNSGIPSGR-FGHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACC 80 (305)
Q Consensus 2 ~~W~~~~~~~p~~r-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~ 80 (305)
-+|+++....+.+. .-.++....+++|+.|- . ..+++ ..+ .-.+|+.+......|. .....+.
T Consensus 66 ~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~-~------g~i~~-S~D------gG~tW~~~~~~~~~~~--~~~~i~~ 129 (327)
T 2xbg_A 66 QTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGE-P------PIMLH-TTD------GGQSWSQIPLDPKLPG--SPRLIKA 129 (327)
T ss_dssp SSCEECCCCCSCCCCEEEEEEEETTEEEEEEE-T------TEEEE-ESS------TTSSCEECCCCTTCSS--CEEEEEE
T ss_pred CCCeECCCCCCCCCccEEEEEecCCeEEEEEC-C------CeEEE-ECC------CCCCceECccccCCCC--CeEEEEE
Confidence 47888853222222 23344455678887652 1 12332 110 3568998764321221 1233333
Q ss_pred ecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEE
Q 021952 81 IDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFL 160 (305)
Q Consensus 81 ~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~ 160 (305)
..++.+|+.|.. + .+++-+-.-. +|+++..+ .+..-+.++...++.++++|-.+ .+++-
T Consensus 130 ~~~~~~~~~~~~---g----~v~~S~DgG~----tW~~~~~~---~~~~~~~~~~~~~~~~~~~g~~G-------~~~~S 188 (327)
T 2xbg_A 130 LGNGSAEMITNV---G----AIYRTKDSGK----NWQALVQE---AIGVMRNLNRSPSGEYVAVSSRG-------SFYST 188 (327)
T ss_dssp EETTEEEEEETT---C----CEEEESSTTS----SEEEEECS---CCCCEEEEEECTTSCEEEEETTS-------SEEEE
T ss_pred ECCCCEEEEeCC---c----cEEEEcCCCC----CCEEeecC---CCcceEEEEEcCCCcEEEEECCC-------cEEEE
Confidence 455578887642 1 2444322233 89998721 12233444444456677665321 24443
Q ss_pred EccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEec
Q 021952 161 DVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGG 205 (305)
Q Consensus 161 d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG 205 (305)
+-. +...|+.+. .+.+...+.+....++.+|+.+.
T Consensus 189 ~d~-gG~tW~~~~---------~~~~~~~~~~~~~~~g~~~~~~~ 223 (327)
T 2xbg_A 189 WEP-GQTAWEPHN---------RTTSRRLHNMGFTPDGRLWMIVN 223 (327)
T ss_dssp ECT-TCSSCEEEE---------CCSSSCEEEEEECTTSCEEEEET
T ss_pred eCC-CCCceeECC---------CCCCCccceeEECCCCCEEEEeC
Confidence 322 127899984 12233334444335677887763
No 35
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=92.57 E-value=4.9 Score=35.08 Aligned_cols=193 Identities=12% Similarity=0.104 Sum_probs=98.4
Q ss_pred eEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCCccCcEEEEeccC---CCCCcCeEEcccCCCCCccCCCeeEE
Q 021952 59 SWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSE---NFCFGSWQQLVTHPSPPARSGHSLTR 135 (305)
Q Consensus 59 ~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~---~~~~~~W~~~~~~~~p~~r~~~~~~~ 135 (305)
.|++-. .+..|....-|+.|.+++ .=|++|=...+ ..-.++-.+-... .+..+.=+.++ ..-.+-++--++.
T Consensus 271 pW~~t~-L~~i~~vTe~HSFa~i~~-~~fa~GyHnGD-v~PRe~G~~yfs~~~~sp~~~vrr~i~--sey~~~AsEPCvk 345 (670)
T 3ju4_A 271 PWRKTD-LGLIPSVTEVHSFATIDN-NGFAMGYHQGD-VAPREVGLFYFPDAFNSPSNYVRRQIP--SEYEPDASEPCIK 345 (670)
T ss_dssp CCEEEE-CCSCTTCSEEEEEEECSS-SCEEEEEEECS-SSSCEEEEEEETTTTTCTTCCEEEECC--GGGCTTEEEEEEE
T ss_pred Cceecc-cccccceeeeeeeeEecC-CceEEEeccCC-CCcceeeEEEecccccCCcceeeeech--hhhccccccchhh
Confidence 344433 233566667899999987 45576643222 1223333322222 11112233343 1112222223334
Q ss_pred EeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCC----
Q 021952 136 IGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARR---- 211 (305)
Q Consensus 136 ~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~---- 211 (305)
..++.+|+.---......-+.+.+-+... ..|+.+..+-.....++| ....++.||+||-......
T Consensus 346 yYdgvLyLtTRgt~~~~~GS~L~rs~d~G--q~w~slrfp~nvHhtnlP--------FakvgD~l~mFgsERA~nEWE~G 415 (670)
T 3ju4_A 346 YYDGVLYLITRGTRGDRLGSSLHRSRDIG--QTWESLRFPHNVHHTTLP--------FAKVGDDLIMFGSERAENEWEAG 415 (670)
T ss_dssp EETTEEEEEEEESCTTSCCCEEEEESSTT--SSCEEEECTTCCCSSCCC--------EEEETTEEEEEEECSSTTCSSTT
T ss_pred hhCCEEEEEecCcCCCCCcceeeeecccC--CchhheeccccccccCCC--------cceeCCEEEEEeccccccccccC
Confidence 44789998863323445566777777766 889999533111112222 1236899999997743211
Q ss_pred ----c----cCcEEEEecCCCCccccccccccccccccccceeecc---cCcCCCCCceeeeeeeCCCcEEEEEcCc
Q 021952 212 ----R----KDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRA---EGYKPNCRSFHRACPDYSGRYLYVFGGM 277 (305)
Q Consensus 212 ----~----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~v~~---~~~~p~~r~~~~~~~~~~~~~i~v~GG~ 277 (305)
. ....+.... -|..|..++-.|..+.. .|..-..-.+-+.+++..+=--|||||.
T Consensus 416 ~pD~RY~a~yPRtF~~r~-----------nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgE 481 (670)
T 3ju4_A 416 APDDRYKASYPRTFYARL-----------NVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGE 481 (670)
T ss_dssp CCCCCSSCBCCEEEEEEE-----------ETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEB
T ss_pred CCcccccccCCceEEEEe-----------ecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCc
Confidence 0 122222221 24466667888987754 2444444455555555433355689997
No 36
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=92.56 E-value=4.9 Score=35.03 Aligned_cols=97 Identities=10% Similarity=0.119 Sum_probs=50.9
Q ss_pred CcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCC
Q 021952 100 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNI 179 (305)
Q Consensus 100 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~ 179 (305)
..++++|+.++ +...+. ... ..........+++.++++.... ....++.+|+.+ ..-..+.
T Consensus 247 ~~i~~~d~~~~----~~~~l~--~~~--~~~~~~~~spdg~~l~~~s~~~---g~~~i~~~d~~~--~~~~~l~------ 307 (415)
T 2hqs_A 247 LNLYVMDLASG----QIRQVT--DGR--SNNTEPTWFPDSQNLAFTSDQA---GRPQVYKVNING--GAPQRIT------ 307 (415)
T ss_dssp CEEEEEETTTC----CEEECC--CCS--SCEEEEEECTTSSEEEEEECTT---SSCEEEEEETTS--SCCEECC------
T ss_pred ceEEEEECCCC----CEEeCc--CCC--CcccceEECCCCCEEEEEECCC---CCcEEEEEECCC--CCEEEEe------
Confidence 46999999887 665554 111 1112233333555555544311 124699999988 6555552
Q ss_pred CCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 180 PAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 180 ~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
. . ...........+++.+++++.+.. ...++++|+.
T Consensus 308 --~-~-~~~~~~~~~spdG~~l~~~~~~~g---~~~i~~~d~~ 343 (415)
T 2hqs_A 308 --W-E-GSQNQDADVSSDGKFMVMVSSNGG---QQHIAKQDLA 343 (415)
T ss_dssp --C-S-SSEEEEEEECTTSSEEEEEEECSS---CEEEEEEETT
T ss_pred --c-C-CCcccCeEECCCCCEEEEEECcCC---ceEEEEEECC
Confidence 1 1 111122222245565556554321 3468999987
No 37
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=92.49 E-value=4.5 Score=34.43 Aligned_cols=120 Identities=18% Similarity=0.233 Sum_probs=64.0
Q ss_pred ceeEEEECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCC
Q 021952 17 GHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYG 96 (305)
Q Consensus 17 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~ 96 (305)
..+.+..+++||+... ...++.+|.. ..+..|+.-... . ...+.+..+ +.+|+...
T Consensus 96 ~~~~~~~~~~v~v~~~-------~g~l~a~d~~-----tG~~~W~~~~~~-----~-~~~~p~~~~-~~v~v~~~----- 151 (376)
T 3q7m_A 96 SGGVTVSGGHVYIGSE-------KAQVYALNTS-----DGTVAWQTKVAG-----E-ALSRPVVSD-GLVLIHTS----- 151 (376)
T ss_dssp EEEEEEETTEEEEEET-------TSEEEEEETT-----TCCEEEEEECSS-----C-CCSCCEEET-TEEEEECT-----
T ss_pred ccCceEeCCEEEEEcC-------CCEEEEEECC-----CCCEEEEEeCCC-----c-eEcCCEEEC-CEEEEEcC-----
Confidence 3445566888887432 1368888871 124458753211 1 112223334 47777432
Q ss_pred CccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEe
Q 021952 97 LRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 172 (305)
Q Consensus 97 ~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~ 172 (305)
...++.+|.+++ ...|+.....+....+...+.+.. ++.+|+ |... ..++.+|+.++...|+.-
T Consensus 152 --~g~l~~~d~~tG--~~~W~~~~~~~~~~~~~~~~~~~~-~~~v~~-g~~~------g~l~~~d~~tG~~~w~~~ 215 (376)
T 3q7m_A 152 --NGQLQALNEADG--AVKWTVNLDMPSLSLRGESAPTTA-FGAAVV-GGDN------GRVSAVLMEQGQMIWQQR 215 (376)
T ss_dssp --TSEEEEEETTTC--CEEEEEECCC-----CCCCCCEEE-TTEEEE-CCTT------TEEEEEETTTCCEEEEEE
T ss_pred --CCeEEEEECCCC--cEEEEEeCCCCceeecCCCCcEEE-CCEEEE-EcCC------CEEEEEECCCCcEEEEEe
Confidence 235899998875 245876542111111222334444 566665 3321 358999998877889875
No 38
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=91.65 E-value=8.8 Score=36.55 Aligned_cols=109 Identities=9% Similarity=0.039 Sum_probs=58.4
Q ss_pred eEEecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEccc-CCCCCccCCCeeEEEeCCEEEEEcccCCCCcccce
Q 021952 78 ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVT-HPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLND 156 (305)
Q Consensus 78 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~-~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~ 156 (305)
++...++.|++. .. . .-+++||++++ +++.... ...+... -.++....++.+++... +.
T Consensus 500 i~~d~~g~lWig-t~-~-----~Gl~~~~~~~~----~~~~~~~~~~l~~~~-i~~i~~d~~g~lWi~T~--------~G 559 (781)
T 3v9f_A 500 IAQDSEGRFWIG-TF-G-----GGVGIYTPDMQ----LVRKFNQYEGFCSNT-INQIYRSSKGQMWLATG--------EG 559 (781)
T ss_dssp EEECTTCCEEEE-ES-S-----SCEEEECTTCC----EEEEECTTTTCSCSC-EEEEEECTTSCEEEEET--------TE
T ss_pred EEEcCCCCEEEE-Ec-C-----CCEEEEeCCCC----eEEEccCCCCCCCCe-eEEEEECCCCCEEEEEC--------CC
Confidence 333444567663 22 1 23889999887 7877652 1122111 11222223456666432 13
Q ss_pred e-EEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 157 V-WFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 157 ~-~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
+ ++||..+ .+++... ....+|.... .+.+...++.||+.+. +.+.+||++
T Consensus 560 lv~~~d~~~--~~~~~~~-----~~~gl~~~~i-~~i~~d~~g~lW~~t~--------~Gl~~~~~~ 610 (781)
T 3v9f_A 560 LVCFPSARN--FDYQVFQ-----RKEGLPNTHI-RAISEDKNGNIWASTN--------TGISCYITS 610 (781)
T ss_dssp EEEESCTTT--CCCEEEC-----GGGTCSCCCC-CEEEECSSSCEEEECS--------SCEEEEETT
T ss_pred ceEEECCCC--CcEEEcc-----ccCCCCCceE-EEEEECCCCCEEEEcC--------CceEEEECC
Confidence 6 8889888 7777663 1223443333 2343434677887652 127889987
No 39
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=91.46 E-value=5.6 Score=33.31 Aligned_cols=66 Identities=12% Similarity=0.012 Sum_probs=35.5
Q ss_pred CCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCCCCCCCCcc-eeEEEEEeC---CEEEEEeccCCCCCcc
Q 021952 138 GNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRV-GHSATLILG---GRVLIYGGEDSARRRK 213 (305)
Q Consensus 138 ~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~-~~~~~~~~~---~~l~v~GG~~~~~~~~ 213 (305)
++.+++.|+.+ ..+..||+.++...+..+. .+..... -.+.....+ +.+++.|+.+.
T Consensus 171 ~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~--------~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg----- 231 (379)
T 3jrp_A 171 ESRKFVTGGAD------NLVKIWKYNSDAQTYVLES--------TLEGHSDWVRDVAWSPTVLLRSYLASVSQDR----- 231 (379)
T ss_dssp TTCEEEEEETT------SCEEEEEEETTTTEEEEEE--------EECCCSSCEEEEEECCCCSSSEEEEEEETTS-----
T ss_pred CCCEEEEEeCC------CeEEEEEecCCCcceeeEE--------EEecccCcEeEEEECCCCCCCCeEEEEeCCC-----
Confidence 35677777764 2478888876334454432 1111111 112222234 67888888764
Q ss_pred CcEEEEecCC
Q 021952 214 DDFWVLDTKA 223 (305)
Q Consensus 214 ~~~~~~d~~~ 223 (305)
.+.++|+.+
T Consensus 232 -~i~iwd~~~ 240 (379)
T 3jrp_A 232 -TCIIWTQDN 240 (379)
T ss_dssp -CEEEEEESS
T ss_pred -EEEEEeCCC
Confidence 377888763
No 40
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=91.26 E-value=4.2 Score=33.78 Aligned_cols=123 Identities=11% Similarity=-0.014 Sum_probs=62.5
Q ss_pred CCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCCccCcEE
Q 021952 24 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTW 103 (305)
Q Consensus 24 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 103 (305)
+++||+.+... ..++++|+ .+.+.+.+... ....-++++...++++|+..... ......++
T Consensus 55 ~g~l~~~~~~~------~~i~~~d~-------~~~~~~~~~~~----~~~~~~~i~~~~dg~l~v~~~~~--~~~~~~i~ 115 (333)
T 2dg1_A 55 QGQLFLLDVFE------GNIFKINP-------ETKEIKRPFVS----HKANPAAIKIHKDGRLFVCYLGD--FKSTGGIF 115 (333)
T ss_dssp TSCEEEEETTT------CEEEEECT-------TTCCEEEEEEC----SSSSEEEEEECTTSCEEEEECTT--SSSCCEEE
T ss_pred CCCEEEEECCC------CEEEEEeC-------CCCcEEEEeeC----CCCCcceEEECCCCcEEEEeCCC--CCCCceEE
Confidence 45577665422 35788888 55565554321 11223344444455788765421 11234689
Q ss_pred EEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEe
Q 021952 104 VLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 172 (305)
Q Consensus 104 ~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~ 172 (305)
++|++++ +...+.. .......-..++...++.+|+.............++++|+.+ .+...+
T Consensus 116 ~~d~~~~----~~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~--~~~~~~ 177 (333)
T 2dg1_A 116 AATENGD----NLQDIIE-DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF--RTVTPI 177 (333)
T ss_dssp EECTTSC----SCEEEEC-SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS--CCEEEE
T ss_pred EEeCCCC----EEEEEEc-cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCC--CEEEEe
Confidence 9999886 5443321 111111222334444567777543211112235699999877 555554
No 41
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=90.04 E-value=13 Score=35.00 Aligned_cols=120 Identities=13% Similarity=0.088 Sum_probs=66.1
Q ss_pred EEecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCC-CC-----ccCCCeeEEEeCCEEEEEcccCCCCc
Q 021952 79 CCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPS-PP-----ARSGHSLTRIGGNRTVLFGGRGVGYE 152 (305)
Q Consensus 79 ~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~-p~-----~r~~~~~~~~~~~~i~v~GG~~~~~~ 152 (305)
++.++ .||+... .+.++.+|.++. ...|+.-..... .. .....+.++. ++++|+....
T Consensus 74 ~v~~g-~vyv~~~-------~~~v~AlD~~tG--~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~-~~~v~v~~~d----- 137 (677)
T 1kb0_A 74 VVVDG-IMYVSAS-------WSVVHAIDTRTG--NRIWTYDPQIDRSTGFKGCCDVVNRGVALW-KGKVYVGAWD----- 137 (677)
T ss_dssp EEETT-EEEEECG-------GGCEEEEETTTT--EEEEEECCCCCGGGGGGSSSCSCCCCCEEE-TTEEEEECTT-----
T ss_pred EEECC-EEEEECC-------CCeEEEEECCCC--cEEEEEcCCCCccccccccccCCCCCceEE-CCEEEEEcCC-----
Confidence 34454 8988754 246899998874 346876541110 00 0112234444 6788875432
Q ss_pred ccceeEEEEccccceeEEEeccccCCCCCCCCC-CcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCC
Q 021952 153 VLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSL-PRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 224 (305)
Q Consensus 153 ~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~-~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~ 224 (305)
..++.+|.+++...|+.-. ....+. .....+.++ .++.+|+-.+... ......|+.||..+.
T Consensus 138 --g~l~alD~~tG~~~W~~~~------~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~-~~~~g~v~a~D~~tG 200 (677)
T 1kb0_A 138 --GRLIALDAATGKEVWHQNT------FEGQKGSLTITGAPRV-FKGKVIIGNGGAE-YGVRGYITAYDAETG 200 (677)
T ss_dssp --SEEEEEETTTCCEEEEEET------TTTCCSSCBCCSCCEE-ETTEEEECCBCTT-TCCBCEEEEEETTTC
T ss_pred --CEEEEEECCCCCEEeeecC------CcCcCcCcccccCcEE-ECCEEEEEecccc-cCCCCEEEEEECCCC
Confidence 3599999998778898763 001111 111122223 5777766543221 122456999999876
No 42
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=89.91 E-value=10 Score=35.92 Aligned_cols=64 Identities=14% Similarity=0.230 Sum_probs=36.0
Q ss_pred CEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeC--CEEEEEcccCCCCcccceeEEEE
Q 021952 84 RKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGG--NRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 84 ~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~--~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
+.+++.|+. + ..+.++|+.++ +|..+...... ...-.++....+ +.+++.|+.+ ..+..+|
T Consensus 67 ~~~l~s~s~--D----g~I~vwd~~~~----~~~~~~~~~~h-~~~V~~v~~sp~~~~~~l~sgs~d------g~I~vwd 129 (753)
T 3jro_A 67 GTILASCSY--D----GKVLIWKEENG----RWSQIAVHAVH-SASVNSVQWAPHEYGPLLLVASSD------GKVSVVE 129 (753)
T ss_dssp CSEEEEEET--T----SCEEEEEEETT----EEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETT------SEEEEEE
T ss_pred CCEEEEEeC--C----CeEEEEECCCC----cccccccccCC-CCCeEEEEECCCCCCCEEEEEeCC------CcEEEEE
Confidence 467777775 2 34888999887 77665511111 111122333333 5677777654 2588888
Q ss_pred ccc
Q 021952 162 VYE 164 (305)
Q Consensus 162 ~~~ 164 (305)
+.+
T Consensus 130 l~~ 132 (753)
T 3jro_A 130 FKE 132 (753)
T ss_dssp CCS
T ss_pred eec
Confidence 876
No 43
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=89.86 E-value=10 Score=35.79 Aligned_cols=119 Identities=11% Similarity=0.063 Sum_probs=65.0
Q ss_pred EEecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCc--------cCCCeeEEEeCCEEEEEcccCCC
Q 021952 79 CCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPA--------RSGHSLTRIGGNRTVLFGGRGVG 150 (305)
Q Consensus 79 ~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~--------r~~~~~~~~~~~~i~v~GG~~~~ 150 (305)
++.++ .||+... ...++.+|..+. ...|+.-. ..+.. ....+.++. ++++|+....
T Consensus 67 ~v~~g-~vyv~~~-------~~~v~AlD~~tG--~~~W~~~~--~~~~~~~~~~~~~~~~~~~~~~-~g~v~v~~~d--- 130 (689)
T 1yiq_A 67 IVVDG-VMYTTGP-------FSVVYALDARDG--RLIWKYDP--QSDRHRAGEACCDAVNRGVAVW-KGKVYVGVLD--- 130 (689)
T ss_dssp EEETT-EEEEECG-------GGCEEEEETTTC--CEEEEECC--CCCGGGGGGCTTCSCCCCCEEE-TTEEEEECTT---
T ss_pred EEECC-EEEEEcC-------CCeEEEEECCCC--ceeEEEcC--CCCccccccccccCCCCccEEE-CCEEEEEccC---
Confidence 34454 8988654 245899998874 35687654 11110 011223444 5777775421
Q ss_pred CcccceeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCC
Q 021952 151 YEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 224 (305)
Q Consensus 151 ~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~ 224 (305)
..++.+|.+++...|+.-.. ...........+.++ .++.+|+-.+... ......++.||..+.
T Consensus 131 ----g~l~AlDa~TG~~~W~~~~~-----~~~~~~~~~~~sP~v-~~g~v~vg~~~~~-~~~~g~v~a~D~~tG 193 (689)
T 1yiq_A 131 ----GRLEAIDAKTGQRAWSVDTR-----ADHKRSYTITGAPRV-VNGKVVIGNGGAE-FGVRGYVTAYDAETG 193 (689)
T ss_dssp ----SEEEEEETTTCCEEEEEECC-----SCTTSCCBCCSCCEE-ETTEEEECCBCTT-TCCBCEEEEEETTTC
T ss_pred ----CEEEEEECCCCCEeeeecCc-----CCCCCCccccCCcEE-ECCEEEEEeCCCc-cCCCCEEEEEECCCC
Confidence 35899999997788987630 000000111122233 5787766432211 112456999999876
No 44
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.80 E-value=8.3 Score=32.57 Aligned_cols=102 Identities=11% Similarity=0.129 Sum_probs=51.5
Q ss_pred CcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCC
Q 021952 100 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNI 179 (305)
Q Consensus 100 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~ 179 (305)
..++++|+++. ++..+.. ..+ ...........+++.+++...... .....++.+|+.+ ++...+.
T Consensus 216 ~~l~~~d~~~~----~~~~l~~-~~~-~~~~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~--g~~~~l~------ 280 (396)
T 3c5m_A 216 ARMWLVNEDGS----NVRKIKE-HAE-GESCTHEFWIPDGSAMAYVSYFKG-QTDRVIYKANPET--LENEEVM------ 280 (396)
T ss_dssp CCCEEEETTSC----CCEESSC-CCT-TEEEEEEEECTTSSCEEEEEEETT-TCCEEEEEECTTT--CCEEEEE------
T ss_pred ceEEEEECCCC----ceeEeec-cCC-CccccceEECCCCCEEEEEecCCC-CccceEEEEECCC--CCeEEee------
Confidence 57999999876 6666652 111 111112233334443444332111 1123499999988 6666653
Q ss_pred CCCCCCCcceeEEEEEe-CCEEEEEeccCCC----------CCccCcEEEEecC
Q 021952 180 PAGFSLPRVGHSATLIL-GGRVLIYGGEDSA----------RRRKDDFWVLDTK 222 (305)
Q Consensus 180 ~~~~p~~r~~~~~~~~~-~~~l~v~GG~~~~----------~~~~~~~~~~d~~ 222 (305)
..+. .. ..... +++++++.+.+.+ .....+++++|+.
T Consensus 281 --~~~~--~~--~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 281 --VMPP--CS--HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp --ECCS--EE--EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT
T ss_pred --eCCC--CC--CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc
Confidence 1221 11 22224 6666666553211 0123579999987
No 45
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=89.52 E-value=9.5 Score=32.83 Aligned_cols=67 Identities=15% Similarity=0.058 Sum_probs=36.7
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccC-CCCCcc-CCCeeEEEeCCEEEEEcccCCCCcccceeEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTH-PSPPAR-SGHSLTRIGGNRTVLFGGRGVGYEVLNDVWF 159 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~-~~p~~r-~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~ 159 (305)
.++.+++.++.+ ..+.++|+.++ +....... ...... .-.+++...++.+++.++.. ..+.+
T Consensus 132 ~~~~~~~~~~~~------~~i~~~d~~~g----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d------~~v~~ 195 (433)
T 3bws_A 132 DNTRLAIPLLED------EGMDVLDINSG----QTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA------NAVHV 195 (433)
T ss_dssp SSSEEEEEBTTS------SSEEEEETTTC----CEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG------TEEEE
T ss_pred CCCeEEEEeCCC------CeEEEEECCCC----eEeeecCcccccccCCceeEEEEcCCCEEEEEECCC------CEEEE
Confidence 355777776542 34899999886 55443200 000001 11123333456788777653 35889
Q ss_pred EEccc
Q 021952 160 LDVYE 164 (305)
Q Consensus 160 ~d~~~ 164 (305)
+|+++
T Consensus 196 ~d~~~ 200 (433)
T 3bws_A 196 FDLKT 200 (433)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 99987
No 46
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=89.37 E-value=8.2 Score=31.92 Aligned_cols=122 Identities=4% Similarity=-0.028 Sum_probs=63.0
Q ss_pred eeEEecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccce
Q 021952 77 AACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLND 156 (305)
Q Consensus 77 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~ 156 (305)
..+...+++||+.+.. ...++++|++++ +...+.... ...-++++...++++|+..... ......
T Consensus 49 ~~~~~~~g~l~~~~~~------~~~i~~~d~~~~----~~~~~~~~~---~~~~~~i~~~~dg~l~v~~~~~--~~~~~~ 113 (333)
T 2dg1_A 49 GLNFDRQGQLFLLDVF------EGNIFKINPETK----EIKRPFVSH---KANPAAIKIHKDGRLFVCYLGD--FKSTGG 113 (333)
T ss_dssp EEEECTTSCEEEEETT------TCEEEEECTTTC----CEEEEEECS---SSSEEEEEECTTSCEEEEECTT--SSSCCE
T ss_pred CcEECCCCCEEEEECC------CCEEEEEeCCCC----cEEEEeeCC---CCCcceEEECCCCcEEEEeCCC--CCCCce
Confidence 3333445578887653 135899999887 766553111 1222334444466777765321 111246
Q ss_pred eEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 157 VWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 157 ~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
++++|+++ .....+. ........-...+...++.+|+.............++++|+.
T Consensus 114 i~~~d~~~--~~~~~~~-------~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~ 170 (333)
T 2dg1_A 114 IFAATENG--DNLQDII-------EDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD 170 (333)
T ss_dssp EEEECTTS--CSCEEEE-------CSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT
T ss_pred EEEEeCCC--CEEEEEE-------ccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCC
Confidence 99999988 6554331 011111111223332467787765332111223468889876
No 47
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=89.21 E-value=16 Score=34.89 Aligned_cols=106 Identities=8% Similarity=-0.018 Sum_probs=55.6
Q ss_pred EecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEccc--CCCCCcc-CCCeeEEEeCCEEEEEcccCCCCcccce
Q 021952 80 CIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVT--HPSPPAR-SGHSLTRIGGNRTVLFGGRGVGYEVLND 156 (305)
Q Consensus 80 ~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~--~~~p~~r-~~~~~~~~~~~~i~v~GG~~~~~~~~~~ 156 (305)
...++.|++... .-+++||++++ ++ .... .....+- .-.+++...++.+++.... .
T Consensus 505 ~d~~g~lWigt~--------~Gl~~~~~~~~----~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~--------G 563 (795)
T 4a2l_A 505 RDSHKRLWIGGE--------EGLSVFKQEGL----DI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE--------G 563 (795)
T ss_dssp ECTTCCEEEEES--------SCEEEEEEETT----EE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS--------C
T ss_pred ECCCCCEEEEeC--------CceEEEeCCCC----eE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC--------C
Confidence 334456776332 23899999887 66 4321 0110111 1112222234566664321 3
Q ss_pred eEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 157 VWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 157 ~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
+++||..+ .+++... ....+|.... .+.+...++.||+.+. +.+.+||++
T Consensus 564 l~~~d~~~--~~~~~~~-----~~~gl~~~~i-~~i~~d~~g~lWi~t~--------~Gl~~~~~~ 613 (795)
T 4a2l_A 564 FYCFNEKD--KQIKRYN-----TTNGLPNNVV-YGILEDSFGRLWLSTN--------RGISCFNPE 613 (795)
T ss_dssp EEEEETTT--TEEEEEC-----GGGTCSCSCE-EEEEECTTSCEEEEET--------TEEEEEETT
T ss_pred ceeECCCC--CcEEEeC-----CCCCCchhhe-EEEEECCCCCEEEEcC--------CceEEEcCC
Confidence 88999988 7887763 1223443332 2333324577887763 137888887
No 48
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=88.37 E-value=17 Score=34.17 Aligned_cols=132 Identities=13% Similarity=0.035 Sum_probs=70.8
Q ss_pred eeEEEECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCC--CCC---CCCceeEEecCCEEEEEecc
Q 021952 18 HTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIA--PPA---RGAHAACCIDNRKMVIHAGI 92 (305)
Q Consensus 18 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~--p~~---r~~~~~~~~~~~~lyv~GG~ 92 (305)
.+.++.+++||+... .+.++.+|.. .-+..|+.-...... +.. ......+. .+++||+...
T Consensus 71 ~~P~v~~g~vyv~~~-------~~~v~AlD~~-----tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~-~~~~v~v~~~- 136 (677)
T 1kb0_A 71 ATPVVVDGIMYVSAS-------WSVVHAIDTR-----TGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL-WKGKVYVGAW- 136 (677)
T ss_dssp CCCEEETTEEEEECG-------GGCEEEEETT-----TTEEEEEECCCCCGGGGGGSSSCSCCCCCEE-ETTEEEEECT-
T ss_pred eCCEEECCEEEEECC-------CCeEEEEECC-----CCcEEEEEcCCCCccccccccccCCCCCceE-ECCEEEEEcC-
Confidence 455677999998754 2357888871 124568763321100 000 01122333 4447877532
Q ss_pred CCCCCccCcEEEEeccCCCCCcCeEEccc-CCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEE
Q 021952 93 GLYGLRLGDTWVLELSENFCFGSWQQLVT-HPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQ 171 (305)
Q Consensus 93 ~~~~~~~~~~~~~d~~~~~~~~~W~~~~~-~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~ 171 (305)
-..++.+|.+++ ...|+.-.. ..........+.++. ++.+|+..+.. ....-..++.||.+++...|+.
T Consensus 137 ------dg~l~alD~~tG--~~~W~~~~~~~~~~~~~~~~~p~v~-~~~v~v~~~~~-~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 137 ------DGRLIALDAATG--KEVWHQNTFEGQKGSLTITGAPRVF-KGKVIIGNGGA-EYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp ------TSEEEEEETTTC--CEEEEEETTTTCCSSCBCCSCCEEE-TTEEEECCBCT-TTCCBCEEEEEETTTCCEEEEE
T ss_pred ------CCEEEEEECCCC--CEEeeecCCcCcCcCcccccCcEEE-CCEEEEEeccc-ccCCCCEEEEEECCCCcEEEEe
Confidence 145899999875 345876531 111111122233444 56776644321 2223456999999997788987
Q ss_pred ec
Q 021952 172 IP 173 (305)
Q Consensus 172 ~~ 173 (305)
-.
T Consensus 207 ~~ 208 (677)
T 1kb0_A 207 FS 208 (677)
T ss_dssp ES
T ss_pred cc
Confidence 63
No 49
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=87.96 E-value=11 Score=31.44 Aligned_cols=113 Identities=18% Similarity=0.117 Sum_probs=52.3
Q ss_pred CCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCCccCcEE
Q 021952 24 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTW 103 (305)
Q Consensus 24 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 103 (305)
+++||+.+.... ...++++++ .+.+++.+.... .....-.+.++.-+++.||+.+.. ...+.
T Consensus 50 dg~l~~~~~~~~----~~~v~~~~~-------~~g~~~~~~~~~-~~~~~p~~~a~spdg~~l~~~~~~------~~~v~ 111 (347)
T 3hfq_A 50 KDCLYSVDKEDD----EGGIAAWQI-------DGQTAHKLNTVV-APGTPPAYVAVDEARQLVYSANYH------KGTAE 111 (347)
T ss_dssp TCEEEEEEEETT----EEEEEEEEE-------ETTEEEEEEEEE-EESCCCSEEEEETTTTEEEEEETT------TTEEE
T ss_pred CCeEEEEEecCC----CceEEEEEe-------cCCcEEEeeeee-cCCCCCEEEEECCCCCEEEEEeCC------CCEEE
Confidence 456666543211 246788888 455555444210 001111223333344456665422 13477
Q ss_pred EEeccCCCCCcCeEEcc----cCCCCCcc----CCCeeEEEeCCEEEEEcccCCCCcccceeEEEEcc
Q 021952 104 VLELSENFCFGSWQQLV----THPSPPAR----SGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVY 163 (305)
Q Consensus 104 ~~d~~~~~~~~~W~~~~----~~~~p~~r----~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~ 163 (305)
++|+..+ .+...+. .+..|.+| ..+.++...++++|+.+... +.+.+||+.
T Consensus 112 v~~~~~~---g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~------~~v~~~~~~ 170 (347)
T 3hfq_A 112 VMKIAAD---GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS------DKVYVYNVS 170 (347)
T ss_dssp EEEECTT---SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT------TEEEEEEEC
T ss_pred EEEeCCC---CCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC------CEEEEEEEC
Confidence 7777532 1333322 22222222 12334454456666654322 368888887
No 50
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=87.74 E-value=13 Score=34.89 Aligned_cols=120 Identities=11% Similarity=0.062 Sum_probs=64.7
Q ss_pred EEecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCC------ccCCCeeEEEeCCEEEEEcccCCCCc
Q 021952 79 CCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPP------ARSGHSLTRIGGNRTVLFGGRGVGYE 152 (305)
Q Consensus 79 ~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~------~r~~~~~~~~~~~~i~v~GG~~~~~~ 152 (305)
++.++ .||+.... ..++.+|.++. ...|+.-....... .....+.++. ++++|+....
T Consensus 63 ~v~~g-~vyv~~~~-------~~v~AlD~~tG--~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~~~d----- 126 (668)
T 1kv9_A 63 LFHDG-VIYTSMSW-------SRVIAVDAASG--KELWRYDPEVAKVKARTSCCDAVNRGVALW-GDKVYVGTLD----- 126 (668)
T ss_dssp EEETT-EEEEEEGG-------GEEEEEETTTC--CEEEEECCCCCGGGGGGCTTCSCCCCCEEE-BTEEEEECTT-----
T ss_pred EEECC-EEEEECCC-------CeEEEEECCCC--hhceEECCCCCccccccccccCCccceEEE-CCEEEEEcCC-----
Confidence 34454 89887542 35889998774 34687654111000 0011233444 5677775321
Q ss_pred ccceeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCC
Q 021952 153 VLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 224 (305)
Q Consensus 153 ~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~ 224 (305)
..++.+|.+++...|+.-.. ..........+.++ .++.+|+-.+.. .......++.||.++.
T Consensus 127 --g~l~alD~~tG~~~W~~~~~------~~~~~~~~~~~P~v-~~~~v~vg~~~~-~~~~~g~v~a~D~~tG 188 (668)
T 1kv9_A 127 --GRLIALDAKTGKAIWSQQTT------DPAKPYSITGAPRV-VKGKVIIGNGGA-EYGVRGFVSAYDADTG 188 (668)
T ss_dssp --SEEEEEETTTCCEEEEEECS------CTTSSCBCCSCCEE-ETTEEEECCBCT-TTCCBCEEEEEETTTC
T ss_pred --CEEEEEECCCCCEeeeeccC------CCCCcceecCCCEE-ECCEEEEeCCCC-CcCCCCEEEEEECCCC
Confidence 35999999997789987630 00011111122333 577776643221 1112456999999876
No 51
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=87.66 E-value=17 Score=33.37 Aligned_cols=120 Identities=15% Similarity=0.151 Sum_probs=65.5
Q ss_pred EEecCCEEEEEeccCCCCCccCcEEEEec-cCCCCCcCeEEcccCCC-CC--c---cCCCeeEEEeCCEEEEEcccCCCC
Q 021952 79 CCIDNRKMVIHAGIGLYGLRLGDTWVLEL-SENFCFGSWQQLVTHPS-PP--A---RSGHSLTRIGGNRTVLFGGRGVGY 151 (305)
Q Consensus 79 ~~~~~~~lyv~GG~~~~~~~~~~~~~~d~-~~~~~~~~W~~~~~~~~-p~--~---r~~~~~~~~~~~~i~v~GG~~~~~ 151 (305)
++.++ .+|+.... ...++.+|. ++. ...|+.-..... .. . ....+.++. ++++|+....
T Consensus 59 ~v~~g-~vyv~~~~------~~~v~AlD~~~tG--~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~~~d---- 124 (571)
T 2ad6_A 59 LVIGD-MMYVHSAF------PNNTYALNLNDPG--KIVWQHKPKQDASTKAVMCCDVVDRGLAYG-AGQIVKKQAN---- 124 (571)
T ss_dssp EEETT-EEEEECST------TTCEEEEETTCTT--SEEEEECCCCCGGGGGGCTTCSCCCCCEEE-TTEEEEECTT----
T ss_pred EEECC-EEEEEeCC------CCEEEEEeCCCCc--cEEEEEcCCCCccccccccccccccccEEE-CCEEEEEeCC----
Confidence 34454 89987542 246899998 664 356887541110 00 0 112234444 6788876432
Q ss_pred cccceeEEEEccccceeEEEeccccCCCCCCCCCC-cceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCC
Q 021952 152 EVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLP-RVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 224 (305)
Q Consensus 152 ~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~-r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~ 224 (305)
..++.+|.+++...|+.-. ...+.. ....+.++ .++.+|+-.+... ......++.||.++.
T Consensus 125 ---g~l~alD~~tG~~~W~~~~-------~~~~~~~~~~~~P~v-~~g~v~vg~~~~~-~~~~g~v~a~D~~tG 186 (571)
T 2ad6_A 125 ---GHLLALDAKTGKINWEVEV-------CDPKVGSTLTQAPFV-AKDTVLMGCSGAE-LGVRGAVNAFDLKTG 186 (571)
T ss_dssp ---SEEEEEETTTCCEEEEEEC-------CCGGGTCBCCSCCEE-ETTEEEEECBCGG-GTCCCEEEEEETTTC
T ss_pred ---CEEEEEECCCCCEEEEecC-------CCCCccceeccCCEE-ECCEEEEEecCCc-cCCCCEEEEEECCCC
Confidence 3599999998778998652 111111 11122223 5787776543211 112346899998876
No 52
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=87.59 E-value=13 Score=31.85 Aligned_cols=110 Identities=15% Similarity=0.114 Sum_probs=53.8
Q ss_pred EEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccc
Q 021952 85 KMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYE 164 (305)
Q Consensus 85 ~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~ 164 (305)
.+++.|+.+ ..+.++|+.+. +....-. .......-.+++...++..++.|+.+ ..+.++|+++
T Consensus 145 ~~l~s~~~d------g~i~iwd~~~~----~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~ 207 (402)
T 2aq5_A 145 NVLLSAGCD------NVILVWDVGTG----AAVLTLG-PDVHPDTIYSVDWSRDGALICTSCRD------KRVRVIEPRK 207 (402)
T ss_dssp TEEEEEETT------SCEEEEETTTT----EEEEEEC-TTTCCSCEEEEEECTTSSCEEEEETT------SEEEEEETTT
T ss_pred CEEEEEcCC------CEEEEEECCCC----CccEEEe-cCCCCCceEEEEECCCCCEEEEEecC------CcEEEEeCCC
Confidence 477777642 34889999876 3322210 01111112233333355667777653 3588999988
Q ss_pred cceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 165 GFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 165 ~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
.+-.... .......+... +....++.+++.|.... ....+.++|+.+
T Consensus 208 --~~~~~~~------~~~~~~~~~~~-~~~~~~~~~l~~g~~~~---~d~~i~iwd~~~ 254 (402)
T 2aq5_A 208 --GTVVAEK------DRPHEGTRPVH-AVFVSEGKILTTGFSRM---SERQVALWDTKH 254 (402)
T ss_dssp --TEEEEEE------ECSSCSSSCCE-EEECSTTEEEEEEECTT---CCEEEEEEETTB
T ss_pred --Cceeeee------ccCCCCCcceE-EEEcCCCcEEEEeccCC---CCceEEEEcCcc
Confidence 4332220 00111111222 22225677777763211 124588899873
No 53
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=87.59 E-value=11 Score=31.33 Aligned_cols=109 Identities=9% Similarity=0.113 Sum_probs=57.3
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
.++++++.|+. -..+.++|+.++ ++..+..-... ...-.++....++.+++.|+.+ ..+..+|
T Consensus 18 ~~~~~l~~~~~------d~~v~i~~~~~~----~~~~~~~~~~h-~~~v~~~~~~~~~~~l~~~~~d------g~i~vwd 80 (372)
T 1k8k_C 18 KDRTQIAICPN------NHEVHIYEKSGN----KWVQVHELKEH-NGQVTGVDWAPDSNRIVTCGTD------RNAYVWT 80 (372)
T ss_dssp TTSSEEEEECS------SSEEEEEEEETT----EEEEEEEEECC-SSCEEEEEEETTTTEEEEEETT------SCEEEEE
T ss_pred CCCCEEEEEeC------CCEEEEEeCCCC----cEEeeeeecCC-CCcccEEEEeCCCCEEEEEcCC------CeEEEEE
Confidence 34467777764 235889999886 66555410101 1111233444456677777653 2488888
Q ss_pred ccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 162 VYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 162 ~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
+++ ..+.... ........-.+.....++.+++.|+.+. .+.++|+.
T Consensus 81 ~~~--~~~~~~~-------~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~v~i~d~~ 126 (372)
T 1k8k_C 81 LKG--RTWKPTL-------VILRINRAARCVRWAPNEKKFAVGSGSR------VISICYFE 126 (372)
T ss_dssp EET--TEEEEEE-------ECCCCSSCEEEEEECTTSSEEEEEETTS------SEEEEEEE
T ss_pred CCC--CeeeeeE-------EeecCCCceeEEEECCCCCEEEEEeCCC------EEEEEEec
Confidence 888 6665442 0011111112222224567777777643 36666765
No 54
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=87.53 E-value=12 Score=31.60 Aligned_cols=143 Identities=11% Similarity=0.045 Sum_probs=70.0
Q ss_pred CEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEe-cCCEEEEEeccCCCCCccCcEE
Q 021952 25 DCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCI-DNRKMVIHAGIGLYGLRLGDTW 103 (305)
Q Consensus 25 ~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~ 103 (305)
..||+.++.. ..+.++|+ .+.+........ ..-.+++.. +++.|++.+.. ...++
T Consensus 44 ~~l~~~~~~d------~~i~v~d~-------~~~~~~~~~~~~-----~~v~~~~~spdg~~l~~~~~~------~~~v~ 99 (391)
T 1l0q_A 44 TKVYVANAHS------NDVSIIDT-------ATNNVIATVPAG-----SSPQGVAVSPDGKQVYVTNMA------SSTLS 99 (391)
T ss_dssp SEEEEEEGGG------TEEEEEET-------TTTEEEEEEECS-----SSEEEEEECTTSSEEEEEETT------TTEEE
T ss_pred CEEEEECCCC------CeEEEEEC-------CCCeEEEEEECC-----CCccceEECCCCCEEEEEECC------CCEEE
Confidence 3566666543 25777887 444443322211 122233333 33356665432 24589
Q ss_pred EEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCC-EEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCCCC
Q 021952 104 VLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGN-RTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAG 182 (305)
Q Consensus 104 ~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~-~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~ 182 (305)
++|+.++ +...... .. ....+++...++ .+++.++.. ..+..+|+.+ .+..... ..+.
T Consensus 100 v~d~~~~----~~~~~~~--~~--~~~~~~~~s~dg~~l~~~~~~~------~~v~~~d~~~--~~~~~~~-----~~~~ 158 (391)
T 1l0q_A 100 VIDTTSN----TVAGTVK--TG--KSPLGLALSPDGKKLYVTNNGD------KTVSVINTVT--KAVINTV-----SVGR 158 (391)
T ss_dssp EEETTTT----EEEEEEE--CS--SSEEEEEECTTSSEEEEEETTT------TEEEEEETTT--TEEEEEE-----ECCS
T ss_pred EEECCCC----eEEEEEe--CC--CCcceEEECCCCCEEEEEeCCC------CEEEEEECCC--CcEEEEE-----ecCC
Confidence 9999886 4433321 11 111233343334 466666542 3699999988 5544331 0011
Q ss_pred CCCCcceeEEEEEe-CCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 183 FSLPRVGHSATLIL-GGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 183 ~p~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
.-...+... ++.+|+.++.+ ..+.++|+.+
T Consensus 159 -----~~~~~~~~~dg~~l~~~~~~~------~~v~~~d~~~ 189 (391)
T 1l0q_A 159 -----SPKGIAVTPDGTKVYVANFDS------MSISVIDTVT 189 (391)
T ss_dssp -----SEEEEEECTTSSEEEEEETTT------TEEEEEETTT
T ss_pred -----CcceEEECCCCCEEEEEeCCC------CEEEEEECCC
Confidence 112222222 34566666543 3488999873
No 55
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=87.00 E-value=21 Score=33.78 Aligned_cols=144 Identities=12% Similarity=0.001 Sum_probs=72.8
Q ss_pred CCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCCccCcEE
Q 021952 24 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTW 103 (305)
Q Consensus 24 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 103 (305)
+++|++++|.. .-+++||+ .+.+++.+.... .+......+++...++.|++. .. . -+.
T Consensus 482 ~g~lWi~~~t~------~Gl~~~d~-------~~~~~~~~~~~~-~~~~~~~~~i~~d~~g~lWig-t~--~-----Gl~ 539 (758)
T 3ott_A 482 EGNVWVLLYNN------KGIDKINP-------RTREVTKLFADE-LTGEKSPNYLLCDEDGLLWVG-FH--G-----GVM 539 (758)
T ss_dssp TSCEEEEETTC------SSEEEEET-------TTTEEEEECTTT-SCGGGCEEEEEECTTSCEEEE-ET--T-----EEE
T ss_pred CCCEEEEccCC------CCcEEEeC-------CCCceEEecCCC-cCCCcccceEEECCCCCEEEE-ec--C-----ceE
Confidence 45688865543 24788888 677777764221 111122233444445578863 32 2 388
Q ss_pred EEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCCCCC
Q 021952 104 VLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGF 183 (305)
Q Consensus 104 ~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~ 183 (305)
+||++++ ++........|. ..-.+++. .++.+++.... .+.+||+.+ .+..... +
T Consensus 540 ~~~~~~~----~~~~~~~~gl~~-~~i~~i~~-~~g~lWi~t~~--------Gl~~~~~~~--~~~~~~~---------~ 594 (758)
T 3ott_A 540 RINPKDE----SQQSISFGSFSN-NEILSMTC-VKNSIWVSTTN--------GLWIIDRKT--MDARQQN---------M 594 (758)
T ss_dssp EECC--C----CCCBCCCCC----CCEEEEEE-ETTEEEEEESS--------CEEEEETTT--CCEEEC-----------
T ss_pred EEecCCC----ceEEecccCCCc-cceEEEEE-CCCCEEEECCC--------CeEEEcCCC--ceeEEec---------C
Confidence 9999887 665553212232 11223333 46777775432 389999998 7666541 2
Q ss_pred CCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 184 SLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 184 p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
+...... ++....+--+.+||..+ +..||++
T Consensus 595 ~~~~~~~-~~~~~~~G~l~fG~~~G-------l~~f~p~ 625 (758)
T 3ott_A 595 TNKRFTS-LLFDPKEDCVYLGGADG-------FGISHSN 625 (758)
T ss_dssp CCCCCSE-EEEETTTTEEEEECBSE-------EEEEEC-
T ss_pred CCCceee-eEEECCCCcEEEecCCc-------eEEEChh
Confidence 2222222 22223233455666543 6777776
No 56
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=86.81 E-value=19 Score=34.17 Aligned_cols=65 Identities=12% Similarity=0.017 Sum_probs=34.5
Q ss_pred CEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCCCCCCCCc-ceeEEEEEeC---CEEEEEeccCCCCCccC
Q 021952 139 NRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPR-VGHSATLILG---GRVLIYGGEDSARRRKD 214 (305)
Q Consensus 139 ~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r-~~~~~~~~~~---~~l~v~GG~~~~~~~~~ 214 (305)
+..++.|+.+ ..+..+|+.++...+..+. .+.... .-.+.....+ +.+++.||.++
T Consensus 170 ~~~l~sgs~d------g~I~iwd~~~~~~~~~~~~--------~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg------ 229 (753)
T 3jro_A 170 SRKFVTGGAD------NLVKIWKYNSDAQTYVLES--------TLEGHSDWVRDVAWSPTVLLRSYLASVSQDR------ 229 (753)
T ss_dssp GCCEEEEETT------SCEEEEEEETTTTEEEEEE--------EECCCSSCEEEEEECCCCSSSEEEEEEESSS------
T ss_pred CCEEEEEECC------CeEEEEeccCCcccceeee--------eecCCCCcEEEEEeccCCCCCCEEEEEecCC------
Confidence 4566666653 2478888876334444332 111111 1112222234 68888888764
Q ss_pred cEEEEecCC
Q 021952 215 DFWVLDTKA 223 (305)
Q Consensus 215 ~~~~~d~~~ 223 (305)
.+.++|+.+
T Consensus 230 ~I~iwd~~~ 238 (753)
T 3jro_A 230 TCIIWTQDN 238 (753)
T ss_dssp CEEEEEESS
T ss_pred EEEEecCCC
Confidence 378888774
No 57
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=86.30 E-value=16 Score=31.91 Aligned_cols=188 Identities=17% Similarity=0.212 Sum_probs=92.1
Q ss_pred ceEecC-CCCCCCCcceeEEEECCEEEEEccccCCCCC--cccceeecccccccccccceEEecccCCCCCCCCCCceeE
Q 021952 3 KWQKVN-SGIPSGRFGHTCVVIGDCLVLFGGINDRGNR--HNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAAC 79 (305)
Q Consensus 3 ~W~~~~-~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~--~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~ 79 (305)
.|++.. +..|..-.-|+.|.+++.-|.+|=.+.+-.+ ..-+|+=+.. ..+..-.-+.+.. +........|.-
T Consensus 271 pW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~---~sp~~~vrr~i~s--ey~~~AsEPCvk 345 (670)
T 3ju4_A 271 PWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAF---NSPSNYVRRQIPS--EYEPDASEPCIK 345 (670)
T ss_dssp CCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTT---TCTTCCEEEECCG--GGCTTEEEEEEE
T ss_pred CceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccc---cCCcceeeeechh--hhccccccchhh
Confidence 588775 4457666778999998887788644432211 2222221111 0111212222222 122223334444
Q ss_pred EecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCe---eEEEeCCEEEEEcccCCCCc----
Q 021952 80 CIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHS---LTRIGGNRTVLFGGRGVGYE---- 152 (305)
Q Consensus 80 ~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~---~~~~~~~~i~v~GG~~~~~~---- 152 (305)
.+++ .||+.--.......=+.+.+-+..-. .|+.+. .|. ..+|+ .+.+ ++.+|+||-.-...+
T Consensus 346 yYdg-vLyLtTRgt~~~~~GS~L~rs~d~Gq----~w~slr---fp~-nvHhtnlPFakv-gD~l~mFgsERA~nEWE~G 415 (670)
T 3ju4_A 346 YYDG-VLYLITRGTRGDRLGSSLHRSRDIGQ----TWESLR---FPH-NVHHTTLPFAKV-GDDLIMFGSERAENEWEAG 415 (670)
T ss_dssp EETT-EEEEEEEESCTTSCCCEEEEESSTTS----SCEEEE---CTT-CCCSSCCCEEEE-TTEEEEEEECSSTTCSSTT
T ss_pred hhCC-EEEEEecCcCCCCCcceeeeecccCC----chhhee---ccc-cccccCCCccee-CCEEEEEeccccccccccC
Confidence 4565 99997543222222344555554444 899885 222 22222 3444 579999986521111
Q ss_pred ---------ccce-eEEEEccc---cceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEE-EEEeccC
Q 021952 153 ---------VLND-VWFLDVYE---GFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRV-LIYGGED 207 (305)
Q Consensus 153 ---------~~~~-~~~~d~~~---~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l-~v~GG~~ 207 (305)
+... +.+.++.. +..+|..++..+ -.+.....-.+-.++++.++-| |||||.+
T Consensus 416 ~pD~RY~a~yPRtF~~r~nv~~W~~d~~ew~nItdqI--YqG~ivNsavGVGSv~vKD~~lyyiFGgEd 482 (670)
T 3ju4_A 416 APDDRYKASYPRTFYARLNVNNWNADDIEWVNITDQI--YQGGIVNSGVGVGSVVVKDNYIYYMFGGED 482 (670)
T ss_dssp CCCCCSSCBCCEEEEEEEETTTCCCTTCCCEEEEECB--BCCSSSCCCSEEEEEEEETTEEEEEEEEBC
T ss_pred CCcccccccCCceEEEEeecccCCccceEEEEeecce--eccccccccccceeEEEeCCEEEEEecCcc
Confidence 1111 22344432 226777775221 1233333334444555578765 8999996
No 58
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=86.20 E-value=13 Score=30.68 Aligned_cols=106 Identities=8% Similarity=0.012 Sum_probs=52.0
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEE-cccCCCCCccCCCeeEEEeC-CEEEEEcccCCCCcccceeEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQ-LVTHPSPPARSGHSLTRIGG-NRTVLFGGRGVGYEVLNDVWF 159 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~-~~~~~~p~~r~~~~~~~~~~-~~i~v~GG~~~~~~~~~~~~~ 159 (305)
+++.+|+... .+.++++|+.+. +-.. +..+..........++...+ +.+|+.... .+.+++
T Consensus 195 dg~~l~~~~~-------~~~i~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------~~~v~~ 257 (353)
T 3vgz_A 195 EGKRLYTTNA-------DGELITIDTADN----KILSRKKLLDDGKEHFFINISLDTARQRAFITDSK------AAEVLV 257 (353)
T ss_dssp TTTEEEEECT-------TSEEEEEETTTT----EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS------SSEEEE
T ss_pred CCCEEEEEcC-------CCeEEEEECCCC----eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC------CCEEEE
Confidence 4446666533 246889999876 3222 22111111111122334433 456665432 246999
Q ss_pred EEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 160 LDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 160 ~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
+|+.+ .+....- ..+.+ .+.+..-.++.+|+....+ +.+.++|+.
T Consensus 258 ~d~~~--~~~~~~~--------~~~~~--~~~~~s~dg~~l~v~~~~~------~~v~~~d~~ 302 (353)
T 3vgz_A 258 VDTRN--GNILAKV--------AAPES--LAVLFNPARNEAYVTHRQA------GKVSVIDAK 302 (353)
T ss_dssp EETTT--CCEEEEE--------ECSSC--CCEEEETTTTEEEEEETTT------TEEEEEETT
T ss_pred EECCC--CcEEEEE--------EcCCC--ceEEECCCCCEEEEEECCC------CeEEEEECC
Confidence 99988 5443321 11222 1222221334577765432 358999987
No 59
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=86.19 E-value=20 Score=32.82 Aligned_cols=134 Identities=14% Similarity=0.154 Sum_probs=70.5
Q ss_pred eeEEEECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCC--CCCC---CCceeEEecCCEEEEEecc
Q 021952 18 HTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIA--PPAR---GAHAACCIDNRKMVIHAGI 92 (305)
Q Consensus 18 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~--p~~r---~~~~~~~~~~~~lyv~GG~ 92 (305)
.+.++.+++||+.... ...++.+|.... -+..|+.-...... +.++ .....++.+ +++|+...
T Consensus 56 ~~P~v~~g~vyv~~~~------~~~v~AlD~~~t----G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~~~- 123 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAF------PNNTYALNLNDP----GKIVWQHKPKQDASTKAVMCCDVVDRGLAYGA-GQIVKKQA- 123 (571)
T ss_dssp SCCEEETTEEEEECST------TTCEEEEETTCT----TSEEEEECCCCCGGGGGGCTTCSCCCCCEEET-TEEEEECT-
T ss_pred cccEEECCEEEEEeCC------CCEEEEEeCCCC----ccEEEEEcCCCCccccccccccccccccEEEC-CEEEEEeC-
Confidence 4556779999987542 235788886111 36678863321100 0011 112233334 47887532
Q ss_pred CCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEe
Q 021952 93 GLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 172 (305)
Q Consensus 93 ~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~ 172 (305)
-..++.+|.++. ...|+.-............+.++. ++.+|+..+.. +...-..++.||.+++...|+.-
T Consensus 124 ------dg~l~alD~~tG--~~~W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~-~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 124 ------NGHLLALDAKTG--KINWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGA-ELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp ------TSEEEEEETTTC--CEEEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCG-GGTCCCEEEEEETTTCCEEEEEE
T ss_pred ------CCEEEEEECCCC--CEEEEecCCCCCccceeccCCEEE-CCEEEEEecCC-ccCCCCEEEEEECCCCcEEEEEc
Confidence 135899999875 346875431110000122233344 57777654321 11123469999999877899865
Q ss_pred c
Q 021952 173 P 173 (305)
Q Consensus 173 ~ 173 (305)
.
T Consensus 194 ~ 194 (571)
T 2ad6_A 194 A 194 (571)
T ss_dssp S
T ss_pred c
Confidence 3
No 60
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=86.17 E-value=6.5 Score=32.50 Aligned_cols=115 Identities=14% Similarity=0.066 Sum_probs=54.9
Q ss_pred CCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEe-cCCEEEEEeccCCCCCccCcE
Q 021952 24 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCI-DNRKMVIHAGIGLYGLRLGDT 102 (305)
Q Consensus 24 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~ 102 (305)
++++|+.++.. ..++++|+ .+.+....-..+ .....+..+.. +++.+|+.+.. ...+
T Consensus 10 ~~~~~v~~~~~------~~v~~~d~-------~~~~~~~~~~~~---~~~~~~~~~~s~dg~~~~v~~~~------~~~i 67 (349)
T 1jmx_B 10 GHEYMIVTNYP------NNLHVVDV-------ASDTVYKSCVMP---DKFGPGTAMMAPDNRTAYVLNNH------YGDI 67 (349)
T ss_dssp TCEEEEEEETT------TEEEEEET-------TTTEEEEEEECS---SCCSSCEEEECTTSSEEEEEETT------TTEE
T ss_pred CCEEEEEeCCC------CeEEEEEC-------CCCcEEEEEecC---CCCCCceeEECCCCCEEEEEeCC------CCcE
Confidence 56788776542 36888888 454443222111 10012333333 33457776532 2458
Q ss_pred EEEeccCCCCCcCeEE-cccCCCCC--ccCCCeeEEEeCCEEEEEcccC---CCCcc---cceeEEEEccc
Q 021952 103 WVLELSENFCFGSWQQ-LVTHPSPP--ARSGHSLTRIGGNRTVLFGGRG---VGYEV---LNDVWFLDVYE 164 (305)
Q Consensus 103 ~~~d~~~~~~~~~W~~-~~~~~~p~--~r~~~~~~~~~~~~i~v~GG~~---~~~~~---~~~~~~~d~~~ 164 (305)
+++|+.++ +-.. +.....+. ...-+.++...+++.+++++.. ....+ .+.++++|+.+
T Consensus 68 ~~~d~~t~----~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 134 (349)
T 1jmx_B 68 YGIDLDTC----KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD 134 (349)
T ss_dssp EEEETTTT----EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG
T ss_pred EEEeCCCC----cEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCC
Confidence 99999876 4332 22111111 1122344444445444444321 00001 24799999987
No 61
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=85.92 E-value=14 Score=30.59 Aligned_cols=114 Identities=11% Similarity=0.028 Sum_probs=53.6
Q ss_pred CEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCCccCcEEE
Q 021952 25 DCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWV 104 (305)
Q Consensus 25 ~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~ 104 (305)
+.+|+.............++++|+ .+.+.......+ ......+..-+++.+|+.+.. .+.+++
T Consensus 53 ~~l~~~~~~~~~~~~~~~v~~~d~-------~~~~~~~~~~~~----~~~~~~~~s~dg~~l~v~~~~------~~~v~~ 115 (353)
T 3vgz_A 53 NALWLATSQSRKLDKGGVVYRLDP-------VTLEVTQAIHND----LKPFGATINNTTQTLWFGNTV------NSAVTA 115 (353)
T ss_dssp TEEEEEECCCTTTEESEEEEEECT-------TTCCEEEEEEES----SCCCSEEEETTTTEEEEEETT------TTEEEE
T ss_pred CEEEEEcCCCcCCCCCccEEEEcC-------CCCeEEEEEecC----CCcceEEECCCCCEEEEEecC------CCEEEE
Confidence 467665422111111346888888 444332211111 111222333344467776653 236899
Q ss_pred EeccCCCCCcCe-EEcccCCCCC-----ccCCCeeEEEeC-CEEEEEcccCCCCcccceeEEEEccc
Q 021952 105 LELSENFCFGSW-QQLVTHPSPP-----ARSGHSLTRIGG-NRTVLFGGRGVGYEVLNDVWFLDVYE 164 (305)
Q Consensus 105 ~d~~~~~~~~~W-~~~~~~~~p~-----~r~~~~~~~~~~-~~i~v~GG~~~~~~~~~~~~~~d~~~ 164 (305)
+|+++. +- ..++.+.... +..-+.++...+ +.+|+.+... -..++++|+.+
T Consensus 116 ~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~ 173 (353)
T 3vgz_A 116 IDAKTG----EVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGN 173 (353)
T ss_dssp EETTTC----CEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTT
T ss_pred EeCCCC----eeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCC
Confidence 999886 43 2233211111 111233444433 4566665221 14599999988
No 62
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=85.47 E-value=22 Score=32.65 Aligned_cols=133 Identities=10% Similarity=0.062 Sum_probs=67.4
Q ss_pred eeEEEECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCC---CceeEEecCCEEEEEeccCC
Q 021952 18 HTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARG---AHAACCIDNRKMVIHAGIGL 94 (305)
Q Consensus 18 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~---~~~~~~~~~~~lyv~GG~~~ 94 (305)
.+.++.+++||+.... ..++.+|.. .-+..|+.-........+.+ ....++.+ +++|+...
T Consensus 62 ~~P~v~~g~vyv~~~~-------~~v~AlD~~-----tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~-~~v~~~t~--- 125 (582)
T 1flg_A 62 SQAIVSDGVIYVTASY-------SRLFALDAK-----TGKRLWTYNHRLPDDIRPCCDVVNRGAAIYG-DKVFFGTL--- 125 (582)
T ss_dssp CCCEEETTEEEEEETT-------TEEEEEESS-----SCCEEEEEECCCCTTCCCSSCSCCCCCEEET-TEEEEEET---
T ss_pred eccEEECCEEEEEcCC-------CCEEEEECC-----CCcEEEEEcCCCCcccccccccCCCccEEEC-CEEEEEeC---
Confidence 4556789999987542 137888871 12456886332110001111 12223344 47877432
Q ss_pred CCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeC---C-EEEEEcccCCCCcccceeEEEEccccceeEE
Q 021952 95 YGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGG---N-RTVLFGGRGVGYEVLNDVWFLDVYEGFFKWV 170 (305)
Q Consensus 95 ~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~---~-~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~ 170 (305)
-..++.+|.++. ...|+.-.......-....+.++.++ + .++++|....+...-..++.||.+++...|+
T Consensus 126 ----dg~l~AlD~~TG--~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~ 199 (582)
T 1flg_A 126 ----DASVVALNKNTG--KVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWM 199 (582)
T ss_dssp ----TTEEEEEESSSC--CEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEE
T ss_pred ----CCEEEEEECCCC--CEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEee
Confidence 235899999885 34587643110000011223334432 1 1344444221112235699999999778997
Q ss_pred Ee
Q 021952 171 QI 172 (305)
Q Consensus 171 ~~ 172 (305)
.-
T Consensus 200 ~~ 201 (582)
T 1flg_A 200 RP 201 (582)
T ss_dssp EE
T ss_pred cC
Confidence 54
No 63
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=85.35 E-value=23 Score=32.73 Aligned_cols=135 Identities=11% Similarity=0.052 Sum_probs=69.5
Q ss_pred eeEEEECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCC--CCCCCC---CceeEEe-cCCE----EE
Q 021952 18 HTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSI--APPARG---AHAACCI-DNRK----MV 87 (305)
Q Consensus 18 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~--~p~~r~---~~~~~~~-~~~~----ly 87 (305)
.+-++.+++||+.... ...++.+|.... -+..|+.-..... .+.+++ ....++. .+++ ||
T Consensus 56 ~tP~v~~g~vyv~~~~------~~~v~AlD~~~t----G~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~ 125 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSF------PNNTFALGLDDP----GTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALIL 125 (599)
T ss_dssp SCCEEETTEEEEECST------TTCEEEEETTCT----TSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEE
T ss_pred eccEEECCEEEEEeCC------CCEEEEEeCCCC----CcEEEEECCCCCccccccccccccccceEEEecCCcceeEEE
Confidence 4556779999987542 235778876111 3667886332110 000111 1122320 3335 77
Q ss_pred EEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccce
Q 021952 88 IHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFF 167 (305)
Q Consensus 88 v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~ 167 (305)
+... -..++.+|.++. ...|+.-............+.++. ++.+|+-.+. .+...-..++.||.+++..
T Consensus 126 v~t~-------dg~l~AlDa~TG--~~~W~~~~~~~~~~~~~~ssP~v~-~g~V~vg~~g-~e~g~~g~v~A~D~~TG~~ 194 (599)
T 1w6s_A 126 KTQL-------DGNVAALNAETG--ETVWKVENSDIKVGSTLTIAPYVV-KDKVIIGSSG-AELGVRGYLTAYDVKTGEQ 194 (599)
T ss_dssp EECT-------TSEEEEEETTTC--CEEEEEECCCGGGTCBCCSCCEEE-TTEEEECCBC-GGGTCCCEEEEEETTTCCE
T ss_pred EEcC-------CCEEEEEECCCC--CEEEeecCCCCCccceeecCCEEE-CCEEEEEecc-cccCCCCeEEEEECCCCcE
Confidence 6432 135899998875 345875431110001122233445 5677653321 1111235699999999778
Q ss_pred eEEEec
Q 021952 168 KWVQIP 173 (305)
Q Consensus 168 ~W~~~~ 173 (305)
.|+.-.
T Consensus 195 ~W~~~~ 200 (599)
T 1w6s_A 195 VWRAYA 200 (599)
T ss_dssp EEEEES
T ss_pred EEEEcC
Confidence 898764
No 64
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=85.06 E-value=16 Score=30.75 Aligned_cols=111 Identities=9% Similarity=-0.026 Sum_probs=51.6
Q ss_pred ccceeecccccccccccceEEecccCCCCCCCCCCceeEEe-cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEc
Q 021952 41 NDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCI-DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQL 119 (305)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~ 119 (305)
..++.+|+ .+.+-+.+... .....+....- ++ +.+++............+|.+|+++. +...+
T Consensus 168 ~~l~~~d~-------~~g~~~~l~~~----~~~~~~~~~sp~dg-~~l~~~~~~~~~~~~~~l~~~d~~~~----~~~~l 231 (388)
T 3pe7_A 168 CRLMRVDL-------KTGESTVILQE----NQWLGHPIYRPYDD-STVAFCHEGPHDLVDARMWLINEDGT----NMRKV 231 (388)
T ss_dssp EEEEEEET-------TTCCEEEEEEE----SSCEEEEEEETTEE-EEEEEEECSCTTTSSCSEEEEETTSC----CCEES
T ss_pred ceEEEEEC-------CCCceEEeecC----CccccccEECCCCC-CEEEEEEecCCCCCcceEEEEeCCCC----ceEEe
Confidence 45666776 44444444321 12223333333 33 44444433222223568999999876 66665
Q ss_pred ccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEe
Q 021952 120 VTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 172 (305)
Q Consensus 120 ~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~ 172 (305)
. ...............+++.+++.... .......++.+|+.+ ++-+.+
T Consensus 232 ~--~~~~~~~~~~~~~spdg~~l~~~~~~-~~~~~~~l~~~d~~~--g~~~~l 279 (388)
T 3pe7_A 232 K--THAEGESCTHEFWVPDGSALVYVSYL-KGSPDRFIYSADPET--LENRQL 279 (388)
T ss_dssp C--CCCTTEEEEEEEECTTSSCEEEEEEE-TTCCCEEEEEECTTT--CCEEEE
T ss_pred e--eCCCCcccccceECCCCCEEEEEecC-CCCCcceEEEEecCC--CceEEE
Confidence 4 21111111122333344433332221 111112599999998 665555
No 65
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=84.81 E-value=15 Score=34.92 Aligned_cols=130 Identities=6% Similarity=-0.045 Sum_probs=66.2
Q ss_pred ccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCCccCcE-EEEeccCCCCCcCeEEcc-cCCCCCccCCCee
Q 021952 56 ITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDT-WVLELSENFCFGSWQQLV-THPSPPARSGHSL 133 (305)
Q Consensus 56 ~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~-~~~d~~~~~~~~~W~~~~-~~~~p~~r~~~~~ 133 (305)
.+.+++........|.. .-.+.+...++.|++... . -+ ++||++++ ++.... ...+|.... .++
T Consensus 523 ~~~~~~~~~~~~~l~~~-~i~~i~~d~~g~lWi~T~---~-----Glv~~~d~~~~----~~~~~~~~~gl~~~~i-~~i 588 (781)
T 3v9f_A 523 DMQLVRKFNQYEGFCSN-TINQIYRSSKGQMWLATG---E-----GLVCFPSARNF----DYQVFQRKEGLPNTHI-RAI 588 (781)
T ss_dssp TCCEEEEECTTTTCSCS-CEEEEEECTTSCEEEEET---T-----EEEEESCTTTC----CCEEECGGGTCSCCCC-CEE
T ss_pred CCCeEEEccCCCCCCCC-eeEEEEECCCCCEEEEEC---C-----CceEEECCCCC----cEEEccccCCCCCceE-EEE
Confidence 45566665432212211 112233333456776422 1 25 88888887 777665 223333222 344
Q ss_pred EEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCCCCCCCCcce-eEEEEEeCCEEEEEeccCCCCCc
Q 021952 134 TRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVG-HSATLILGGRVLIYGGEDSARRR 212 (305)
Q Consensus 134 ~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~-~~~~~~~~~~l~v~GG~~~~~~~ 212 (305)
+...++.|++.+.. .+.+||+.+ .++.... ....++..... .+++...++.|| +||..+
T Consensus 589 ~~d~~g~lW~~t~~--------Gl~~~~~~~--~~~~~~~-----~~dGl~~~~f~~~~~~~~~~G~l~-~g~~~G---- 648 (781)
T 3v9f_A 589 SEDKNGNIWASTNT--------GISCYITSK--KCFYTYD-----HSNNIPQGSFISGCVTKDHNGLIY-FGSING---- 648 (781)
T ss_dssp EECSSSCEEEECSS--------CEEEEETTT--TEEEEEC-----GGGTCCSSCEEEEEEEECTTSCEE-EEETTE----
T ss_pred EECCCCCEEEEcCC--------ceEEEECCC--CceEEec-----ccCCccccccccCceEECCCCEEE-EECCCc----
Confidence 44445677776432 388999998 8887764 22234444332 233332345544 455532
Q ss_pred cCcEEEEecC
Q 021952 213 KDDFWVLDTK 222 (305)
Q Consensus 213 ~~~~~~~d~~ 222 (305)
+.+||+.
T Consensus 649 ---l~~f~p~ 655 (781)
T 3v9f_A 649 ---LCFFNPD 655 (781)
T ss_dssp ---EEEECSC
T ss_pred ---eEEEChh
Confidence 5556654
No 66
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=84.53 E-value=19 Score=31.20 Aligned_cols=66 Identities=14% Similarity=0.036 Sum_probs=34.0
Q ss_pred CCceeEEecCCEEEEEeccCCCCCc----cCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcc
Q 021952 74 GAHAACCIDNRKMVIHAGIGLYGLR----LGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGG 146 (305)
Q Consensus 74 ~~~~~~~~~~~~lyv~GG~~~~~~~----~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG 146 (305)
..|++++..++.+|..|-.. .+.. ..+...-..-......+...+. .-..|+++...++++|.+|-
T Consensus 182 ~~hs~alt~~G~v~~wG~n~-~GqlG~g~~~~~~~p~~v~~~~~~~i~~va------~G~~ht~~l~~~G~v~~wG~ 251 (406)
T 4d9s_A 182 AEHTAAVTEDGDLYGWGWGR-YGNLGLGDRTDRLVPERVTSTGGEKMSMVA------CGWRHTISVSYSGALYTYGW 251 (406)
T ss_dssp SSEEEEEETTSCEEEEECCT-TSTTCSSSSCCEEEEEECCCSTTCCEEEEE------ECSSEEEEEETTCCEEEEEC
T ss_pred CCeEEEEeCCCCEEEeeCCC-CCCCCCCCCCCcCccEEecccCCceEEEEE------ECCCcEEEEcCCCCEEEeeC
Confidence 47888888778999998421 1110 0111110000000000222222 23568888888889999984
No 67
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=84.31 E-value=20 Score=31.14 Aligned_cols=66 Identities=14% Similarity=0.069 Sum_probs=34.3
Q ss_pred CCceeEEecCCEEEEEeccCCCCC----ccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcc
Q 021952 74 GAHAACCIDNRKMVIHAGIGLYGL----RLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGG 146 (305)
Q Consensus 74 ~~~~~~~~~~~~lyv~GG~~~~~~----~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG 146 (305)
..|+++...++++|.+|-. ..+. ...+...-..-.........++. .-..|+++...++++|.+|-
T Consensus 234 ~~ht~~l~~~G~v~~wG~n-~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~------~G~~hs~alt~~G~v~~wG~ 303 (406)
T 4d9s_A 234 WRHTISVSYSGALYTYGWS-KYGQLGHGDLEDHLIPHKLEALSNSFISQIS------GGWRHTMALTSDGKLYGWGW 303 (406)
T ss_dssp SSEEEEEETTCCEEEEECC-TTSTTCSSSCCCEEEEEECGGGTTSCEEEEE------ECSSEEEEEETTSCEEEEEC
T ss_pred CCcEEEEcCCCCEEEeeCC-CCCCCCCCCCcCccccEEecccCCCCEEEEE------ecCCEEEEEcCCCeEEEeeC
Confidence 4788888777799999842 1111 01111111000000000223332 23468888888889999984
No 68
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=83.94 E-value=18 Score=30.27 Aligned_cols=78 Identities=5% Similarity=-0.125 Sum_probs=33.8
Q ss_pred EEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCE-EEEEcccCCCCcccceeEEEEcc
Q 021952 85 KMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNR-TVLFGGRGVGYEVLNDVWFLDVY 163 (305)
Q Consensus 85 ~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~-i~v~GG~~~~~~~~~~~~~~d~~ 163 (305)
..+++|.+......--.+|.+|..+. +++.+... ....-..++...+++ +|+.+... ...-.-.+|.++..
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g----~~~~~~~~---~~~~p~~l~~spdg~~l~~~~~~~-~~~~~v~~~~~~~~ 85 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETG----ESLPLSDA---EVANPSYLIPSADGKFVYSVNEFS-KDQAAVSAFAFDKE 85 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTC----CEEEEEEE---ECSCCCSEEECTTSSEEEEEECCS-STTCEEEEEEEETT
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCC----CEEEeecc---cCCCCceEEECCCCCEEEEEEccC-CCCCcEEEEEEeCC
Confidence 44456766433222223455565665 66666521 111122234443444 55554421 11111124555555
Q ss_pred ccceeEEEe
Q 021952 164 EGFFKWVQI 172 (305)
Q Consensus 164 ~~~~~W~~~ 172 (305)
+ ++.+.+
T Consensus 86 ~--g~~~~~ 92 (361)
T 3scy_A 86 K--GTLHLL 92 (361)
T ss_dssp T--TEEEEE
T ss_pred C--CcEEEe
Confidence 5 556555
No 69
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=83.87 E-value=15 Score=29.46 Aligned_cols=107 Identities=7% Similarity=0.028 Sum_probs=55.1
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
.++.+|+.+.. ....+.+||.+.. .-..+..... ..-+.++...++.+|+..... +.+.+||
T Consensus 87 ~~g~l~v~~~~-----~~~~i~~~d~~g~----~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~~~------~~i~~~~ 148 (286)
T 1q7f_A 87 NSGDIIVTERS-----PTHQIQIYNQYGQ----FVRKFGATIL---QHPRGVTVDNKGRIIVVECKV------MRVIIFD 148 (286)
T ss_dssp TTTEEEEEECG-----GGCEEEEECTTSC----EEEEECTTTC---SCEEEEEECTTSCEEEEETTT------TEEEEEC
T ss_pred CCCeEEEEcCC-----CCCEEEEECCCCc----EEEEecCccC---CCceEEEEeCCCCEEEEECCC------CEEEEEc
Confidence 45688887632 1245888985543 2223321111 112344444456788875432 3588999
Q ss_pred ccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 162 VYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 162 ~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
... .....+. .......+ ...+...++.+|+.... .+.|.+||..
T Consensus 149 ~~g--~~~~~~~-----~~~~~~~p---~~i~~~~~g~l~v~~~~------~~~i~~~~~~ 193 (286)
T 1q7f_A 149 QNG--NVLHKFG-----CSKHLEFP---NGVVVNDKQEIFISDNR------AHCVKVFNYE 193 (286)
T ss_dssp TTS--CEEEEEE-----CTTTCSSE---EEEEECSSSEEEEEEGG------GTEEEEEETT
T ss_pred CCC--CEEEEeC-----CCCccCCc---EEEEECCCCCEEEEECC------CCEEEEEcCC
Confidence 765 4444442 00111111 22333346788887643 2358889875
No 70
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=82.91 E-value=20 Score=30.21 Aligned_cols=104 Identities=14% Similarity=0.083 Sum_probs=51.9
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
.++.+++.|+. + ..+.++|+.+. +...... .. ...-.++....++ .++.|+.+ ..+..||
T Consensus 257 ~~~~~l~~~~~--d----~~i~i~d~~~~----~~~~~~~-~~--~~~i~~~~~~~~~-~l~~~~~d------~~i~i~d 316 (425)
T 1r5m_A 257 DTNKLLLSASD--D----GTLRIWHGGNG----NSQNCFY-GH--SQSIVSASWVGDD-KVISCSMD------GSVRLWS 316 (425)
T ss_dssp TTTTEEEEEET--T----SCEEEECSSSB----SCSEEEC-CC--SSCEEEEEEETTT-EEEEEETT------SEEEEEE
T ss_pred CCCCEEEEEcC--C----CEEEEEECCCC----ccceEec-CC--CccEEEEEECCCC-EEEEEeCC------CcEEEEE
Confidence 34456666664 2 24888888765 2222111 11 1112234444455 66666653 3588999
Q ss_pred ccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 162 VYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 162 ~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
+.+ .+-.... ..... .-.+.....++.+++.|+.+. .+.+||+.
T Consensus 317 ~~~--~~~~~~~--------~~~~~-~i~~~~~s~~~~~l~~~~~dg------~i~i~~~~ 360 (425)
T 1r5m_A 317 LKQ--NTLLALS--------IVDGV-PIFAGRISQDGQKYAVAFMDG------QVNVYDLK 360 (425)
T ss_dssp TTT--TEEEEEE--------ECTTC-CEEEEEECTTSSEEEEEETTS------CEEEEECH
T ss_pred CCC--CcEeEec--------ccCCc-cEEEEEEcCCCCEEEEEECCC------eEEEEECC
Confidence 987 4322221 00111 111222224566777777643 37888876
No 71
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=82.39 E-value=20 Score=29.73 Aligned_cols=154 Identities=9% Similarity=0.059 Sum_probs=73.1
Q ss_pred CCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCCccCcEE
Q 021952 24 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTW 103 (305)
Q Consensus 24 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 103 (305)
++++++.|+.. ..+.++|+ .+.+++.+.... .....-.++....++.+++.|+. + ..+.
T Consensus 19 ~~~~l~~~~~d------~~v~i~~~-------~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~~~~~--d----g~i~ 77 (372)
T 1k8k_C 19 DRTQIAICPNN------HEVHIYEK-------SGNKWVQVHELK--EHNGQVTGVDWAPDSNRIVTCGT--D----RNAY 77 (372)
T ss_dssp TSSEEEEECSS------SEEEEEEE-------ETTEEEEEEEEE--CCSSCEEEEEEETTTTEEEEEET--T----SCEE
T ss_pred CCCEEEEEeCC------CEEEEEeC-------CCCcEEeeeeec--CCCCcccEEEEeCCCCEEEEEcC--C----CeEE
Confidence 44566666543 35777888 555554443221 01111222333334466777764 2 3488
Q ss_pred EEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCCCCC
Q 021952 104 VLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGF 183 (305)
Q Consensus 104 ~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~ 183 (305)
++|+.++ ++..... .......-.++....++..++.|+.+ ..+..+|+..+.. |..... ...
T Consensus 78 vwd~~~~----~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d------~~v~i~d~~~~~~-~~~~~~------~~~ 139 (372)
T 1k8k_C 78 VWTLKGR----TWKPTLV-ILRINRAARCVRWAPNEKKFAVGSGS------RVISICYFEQEND-WWVCKH------IKK 139 (372)
T ss_dssp EEEEETT----EEEEEEE-CCCCSSCEEEEEECTTSSEEEEEETT------SSEEEEEEETTTT-EEEEEE------ECT
T ss_pred EEECCCC----eeeeeEE-eecCCCceeEEEECCCCCEEEEEeCC------CEEEEEEecCCCc-ceeeee------eec
Confidence 8888876 6554431 01111111233333455677777653 2366777765212 222210 011
Q ss_pred CCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 184 SLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 184 p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
+....-.+.....++.+++.|+.+. .+.++|+.
T Consensus 140 ~~~~~i~~~~~~~~~~~l~~~~~dg------~i~~~d~~ 172 (372)
T 1k8k_C 140 PIRSTVLSLDWHPNSVLLAAGSCDF------KCRIFSAY 172 (372)
T ss_dssp TCCSCEEEEEECTTSSEEEEEETTS------CEEEEECC
T ss_pred ccCCCeeEEEEcCCCCEEEEEcCCC------CEEEEEcc
Confidence 1111112222224567778887654 37888864
No 72
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=82.27 E-value=29 Score=31.47 Aligned_cols=62 Identities=6% Similarity=-0.088 Sum_probs=31.7
Q ss_pred CCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEe-cCCEEEEEeccCCCCCccCcE
Q 021952 24 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCI-DNRKMVIHAGIGLYGLRLGDT 102 (305)
Q Consensus 24 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~ 102 (305)
++++|+.+... +.+.++|. .+.+-...-..+ ...|.+... +++.+|+.+ .+ +.+
T Consensus 148 ~~~~~vs~~~d------~~V~v~D~-------~t~~~~~~i~~g-----~~~~~v~~spdg~~l~v~~-~d------~~V 202 (543)
T 1nir_A 148 PNLFSVTLRDA------GQIALVDG-------DSKKIVKVIDTG-----YAVHISRMSASGRYLLVIG-RD------ARI 202 (543)
T ss_dssp GGEEEEEEGGG------TEEEEEET-------TTCCEEEEEECS-----TTEEEEEECTTSCEEEEEE-TT------SEE
T ss_pred CCEEEEEEcCC------CeEEEEEC-------CCceEEEEEecC-----cccceEEECCCCCEEEEEC-CC------CeE
Confidence 56777775432 24666777 444332211111 114444333 344566654 21 569
Q ss_pred EEEec--cCC
Q 021952 103 WVLEL--SEN 110 (305)
Q Consensus 103 ~~~d~--~~~ 110 (305)
.+||+ .+.
T Consensus 203 ~v~D~~~~t~ 212 (543)
T 1nir_A 203 DMIDLWAKEP 212 (543)
T ss_dssp EEEETTSSSC
T ss_pred EEEECcCCCC
Confidence 99999 554
No 73
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=82.20 E-value=31 Score=31.84 Aligned_cols=122 Identities=17% Similarity=0.181 Sum_probs=63.7
Q ss_pred eEEecCCEEEEEeccCCCCCccCcEEEEec-cCCCCCcCeEEcccCCC---CCcc---CCCeeEEE-eCCE----EEEEc
Q 021952 78 ACCIDNRKMVIHAGIGLYGLRLGDTWVLEL-SENFCFGSWQQLVTHPS---PPAR---SGHSLTRI-GGNR----TVLFG 145 (305)
Q Consensus 78 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~-~~~~~~~~W~~~~~~~~---p~~r---~~~~~~~~-~~~~----i~v~G 145 (305)
-++.++ .||+.... ...++.+|. ++. ...|+.-..... +..+ .....++. .+++ +|+..
T Consensus 58 P~v~~g-~vyv~~~~------~~~v~AlD~~~tG--~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t 128 (599)
T 1w6s_A 58 PLVVDG-KMYIHTSF------PNNTFALGLDDPG--TILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ 128 (599)
T ss_dssp CEEETT-EEEEECST------TTCEEEEETTCTT--SEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC
T ss_pred cEEECC-EEEEEeCC------CCEEEEEeCCCCC--cEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEc
Confidence 344454 89987542 235899998 664 356887651110 0011 11223341 2345 66643
Q ss_pred ccCCCCcccceeEEEEccccceeEEEeccccCCCCCCCCCC-cceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCC
Q 021952 146 GRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLP-RVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 224 (305)
Q Consensus 146 G~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~-r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~ 224 (305)
.. ..++.+|.+++...|+.-. ...... ....+.++ .++.+|+-.+... ......|+.||.++.
T Consensus 129 ~d-------g~l~AlDa~TG~~~W~~~~-------~~~~~~~~~~ssP~v-~~g~V~vg~~g~e-~g~~g~v~A~D~~TG 192 (599)
T 1w6s_A 129 LD-------GNVAALNAETGETVWKVEN-------SDIKVGSTLTIAPYV-VKDKVIIGSSGAE-LGVRGYLTAYDVKTG 192 (599)
T ss_dssp TT-------SEEEEEETTTCCEEEEEEC-------CCGGGTCBCCSCCEE-ETTEEEECCBCGG-GTCCCEEEEEETTTC
T ss_pred CC-------CEEEEEECCCCCEEEeecC-------CCCCccceeecCCEE-ECCEEEEEecccc-cCCCCeEEEEECCCC
Confidence 21 3599999999878898652 111101 11122233 5777765432211 112356899998876
No 74
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=81.90 E-value=22 Score=29.88 Aligned_cols=107 Identities=15% Similarity=0.106 Sum_probs=51.7
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeC-CEEEEEcccCCCCcccceeEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGG-NRTVLFGGRGVGYEVLNDVWFL 160 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~-~~i~v~GG~~~~~~~~~~~~~~ 160 (305)
.++++++.|+.+ ..+.++|+.++ +-.....+ ..... .++....+ ..+++.|+.+ ..+..+
T Consensus 137 pdg~~l~sgs~d------~~i~iwd~~~~----~~~~~~~~--h~~~V-~~~~~~~~~~~~l~s~s~D------~~v~iw 197 (344)
T 4gqb_B 137 SSGTQAVSGSKD------ICIKVWDLAQQ----VVLSSYRA--HAAQV-TCVAASPHKDSVFLSCSED------NRILLW 197 (344)
T ss_dssp TTSSEEEEEETT------SCEEEEETTTT----EEEEEECC--CSSCE-EEEEECSSCTTEEEEEETT------SCEEEE
T ss_pred CCCCEEEEEeCC------CeEEEEECCCC----cEEEEEcC--cCCce-EEEEecCCCCCceeeeccc------cccccc
Confidence 344677777752 24888898876 32222111 11111 11222222 3466777654 248889
Q ss_pred EccccceeEEEeccccCCCCCCCCCCcceeEEEEE--eCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 161 DVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLI--LGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 161 d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
|+++ .+-...- ..........++.. .++.+++.|+.+. .|.++|+.+
T Consensus 198 d~~~--~~~~~~~--------~~~~~~~~~~~~~~~p~~~~~l~sg~~dg------~v~~wd~~~ 246 (344)
T 4gqb_B 198 DTRC--PKPASQI--------GCSAPGYLPTSLAWHPQQSEVFVFGDENG------TVSLVDTKS 246 (344)
T ss_dssp ETTS--SSCEEEC--------C----CCCEEEEEECSSCTTEEEEEETTS------EEEEEESCC
T ss_pred cccc--cceeeee--------ecceeeccceeeeecCCCCcceEEeccCC------cEEEEECCC
Confidence 9987 4432220 11111111122222 3566788887654 377888774
No 75
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=81.40 E-value=21 Score=29.20 Aligned_cols=18 Identities=11% Similarity=-0.151 Sum_probs=10.2
Q ss_pred ceeEEEEccccceeEEEe
Q 021952 155 NDVWFLDVYEGFFKWVQI 172 (305)
Q Consensus 155 ~~~~~~d~~~~~~~W~~~ 172 (305)
+.+.+||+.....+++.+
T Consensus 253 ~~i~v~d~~~~~~~~~~~ 270 (343)
T 1ri6_A 253 SLITVFSVSEDGSVLSKE 270 (343)
T ss_dssp TEEEEEEECTTSCCEEEE
T ss_pred CEEEEEEEcCCCCceEEe
Confidence 358888887211445544
No 76
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=81.31 E-value=23 Score=29.77 Aligned_cols=62 Identities=8% Similarity=0.097 Sum_probs=31.0
Q ss_pred EEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEe--CCEEEEEcccCCCCcccceeEEEEc
Q 021952 85 KMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIG--GNRTVLFGGRGVGYEVLNDVWFLDV 162 (305)
Q Consensus 85 ~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~d~ 162 (305)
.+++.++.+ ..+.++|+.+. +-.... ...........+... ++.+++.|+.+ ..+..+|+
T Consensus 195 ~~~~s~~~d------g~v~~wd~~~~----~~~~~~--~~~~~~~~v~~v~~sp~~~~~la~g~~d------~~i~~wd~ 256 (357)
T 4g56_B 195 TIFLSCGED------GRILLWDTRKP----KPATRI--DFCASDTIPTSVTWHPEKDDTFACGDET------GNVSLVNI 256 (357)
T ss_dssp SCEEEEETT------SCEEECCTTSS----SCBCBC--CCTTCCSCEEEEEECTTSTTEEEEEESS------SCEEEEES
T ss_pred ceeeeeccC------CceEEEECCCC----ceeeee--eeccccccccchhhhhcccceEEEeecc------cceeEEEC
Confidence 466777642 24788888775 322111 111111111222221 24577777653 24888998
Q ss_pred cc
Q 021952 163 YE 164 (305)
Q Consensus 163 ~~ 164 (305)
.+
T Consensus 257 ~~ 258 (357)
T 4g56_B 257 KN 258 (357)
T ss_dssp SC
T ss_pred CC
Confidence 87
No 77
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=81.01 E-value=6.1 Score=33.31 Aligned_cols=107 Identities=9% Similarity=0.061 Sum_probs=49.8
Q ss_pred CCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCcc-CCCeeEEEeCCEEEEEcccCCCCcccceeEEEE
Q 021952 83 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPAR-SGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 83 ~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r-~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
++++++.|+.+ ..+.++|+.++ .|..+. ....-. .-.++....++.+++.|+.+ ..+..+|
T Consensus 22 ~g~~l~~~~~d------~~i~iw~~~~~----~~~~~~--~~~~h~~~v~~~~~s~~~~~l~s~s~d------~~v~vwd 83 (377)
T 3dwl_C 22 QRTEFVTTTAT------NQVELYEQDGN----GWKHAR--TFSDHDKIVTCVDWAPKSNRIVTCSQD------RNAYVYE 83 (377)
T ss_dssp SSSEEECCCSS------SCBCEEEEETT----EEEECC--CBCCCSSCEEEEEECTTTCCEEEEETT------SSEEEC-
T ss_pred CCCEEEEecCC------CEEEEEEccCC----ceEEEE--EEecCCceEEEEEEeCCCCEEEEEeCC------CeEEEEE
Confidence 33566766642 34777888876 676665 111111 11223333455677777753 2488888
Q ss_pred cccccee-EEEeccccCCCCCCCC-CCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 162 VYEGFFK-WVQIPYELQNIPAGFS-LPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 162 ~~~~~~~-W~~~~~~~~~~~~~~p-~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
+.+ .. |.... .+. ....-.+.....++.+++.|+.+. .+.++|+.+
T Consensus 84 ~~~--~~~~~~~~--------~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~ 131 (377)
T 3dwl_C 84 KRP--DGTWKQTL--------VLLRLNRAATFVRWSPNEDKFAVGSGAR------VISVCYFEQ 131 (377)
T ss_dssp -------CCCCEE--------ECCCCSSCEEEEECCTTSSCCEEEESSS------CEEECCC--
T ss_pred cCC--CCceeeee--------EecccCCceEEEEECCCCCEEEEEecCC------eEEEEEECC
Confidence 887 54 33221 111 111111222213566777777654 377778763
No 78
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=80.92 E-value=27 Score=30.22 Aligned_cols=64 Identities=16% Similarity=0.145 Sum_probs=35.8
Q ss_pred CEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEcc
Q 021952 84 RKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVY 163 (305)
Q Consensus 84 ~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~ 163 (305)
+.+++.|+.+ ..+.++|++++ ....+.... .......++....++.+++.|+.+ ..+..+|++
T Consensus 177 ~~~l~s~s~D------~~v~iwd~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~~d------g~i~~wd~~ 239 (435)
T 4e54_B 177 TNQFYASSME------GTTRLQDFKGN----ILRVFASSD-TINIWFCSLDVSASSRMVVTGDNV------GNVILLNMD 239 (435)
T ss_dssp TTEEEEECSS------SCEEEEETTSC----EEEEEECCS-SCSCCCCCEEEETTTTEEEEECSS------SBEEEEESS
T ss_pred CCEEEEEeCC------CEEEEeeccCC----ceeEEeccC-CCCccEEEEEECCCCCEEEEEeCC------CcEeeeccC
Confidence 3566666642 23778888876 444443111 111222234444466788888764 247888887
Q ss_pred c
Q 021952 164 E 164 (305)
Q Consensus 164 ~ 164 (305)
.
T Consensus 240 ~ 240 (435)
T 4e54_B 240 G 240 (435)
T ss_dssp S
T ss_pred c
Confidence 6
No 79
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=80.60 E-value=24 Score=29.44 Aligned_cols=66 Identities=14% Similarity=0.203 Sum_probs=33.2
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
.++.+++.|+.+ ..+.++|..++ .+..+..-... ...-.+++...++.+++.|+.+ ..+..+|
T Consensus 71 p~g~~l~s~s~D------~~v~iw~~~~~----~~~~~~~~~~h-~~~v~~v~~sp~~~~l~s~s~D------~~v~iwd 133 (345)
T 3fm0_A 71 PCGNYLASASFD------ATTCIWKKNQD----DFECVTTLEGH-ENEVKSVAWAPSGNLLATCSRD------KSVWVWE 133 (345)
T ss_dssp TTSSEEEEEETT------SCEEEEEECCC-----EEEEEEECCC-SSCEEEEEECTTSSEEEEEETT------SCEEEEE
T ss_pred CCCCEEEEEECC------CcEEEEEccCC----CeEEEEEccCC-CCCceEEEEeCCCCEEEEEECC------CeEEEEE
Confidence 344677777752 23666777665 55444310100 0111223333456677777764 2477888
Q ss_pred ccc
Q 021952 162 VYE 164 (305)
Q Consensus 162 ~~~ 164 (305)
+.+
T Consensus 134 ~~~ 136 (345)
T 3fm0_A 134 VDE 136 (345)
T ss_dssp ECT
T ss_pred CCC
Confidence 765
No 80
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=79.87 E-value=23 Score=28.78 Aligned_cols=183 Identities=9% Similarity=0.003 Sum_probs=92.2
Q ss_pred ECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCCccCcE
Q 021952 23 IGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDT 102 (305)
Q Consensus 23 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 102 (305)
-++++++.+ .+.++.+|+. .+..|+.-. +.....+++....++++++.... . ...+
T Consensus 46 pdG~ilvs~--------~~~V~~~d~~------G~~~W~~~~-----~~~~~~~~~~~~~dG~~lv~~~~-~----~~~v 101 (276)
T 3no2_A 46 KAGEILFSY--------SKGAKMITRD------GRELWNIAA-----PAGCEMQTARILPDGNALVAWCG-H----PSTI 101 (276)
T ss_dssp TTSCEEEEC--------BSEEEEECTT------SCEEEEEEC-----CTTCEEEEEEECTTSCEEEEEES-T----TEEE
T ss_pred CCCCEEEeC--------CCCEEEECCC------CCEEEEEcC-----CCCccccccEECCCCCEEEEecC-C----CCEE
Confidence 366777732 1247778772 245576422 11112334444445466665432 0 2357
Q ss_pred EEEeccCCCCCcCeEEcccCCCCCc-cCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCCC
Q 021952 103 WVLELSENFCFGSWQQLVTHPSPPA-RSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPA 181 (305)
Q Consensus 103 ~~~d~~~~~~~~~W~~~~~~~~p~~-r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~ 181 (305)
+.+|.+.+ ..|+.-.....+.+ ...+.+....++.+++..... ..+..||.+ +...|+.-. .
T Consensus 102 ~~vd~~Gk---~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~------~~v~~~d~~-G~~~w~~~~-------~ 164 (276)
T 3no2_A 102 LEVNMKGE---VLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT------SEVREIAPN-GQLLNSVKL-------S 164 (276)
T ss_dssp EEECTTSC---EEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTT------TEEEEECTT-SCEEEEEEC-------S
T ss_pred EEEeCCCC---EEEEEeccCCCCcccccccCceECCCCCEEEEecCC------CEEEEECCC-CCEEEEEEC-------C
Confidence 88887543 34554321111111 112223344455666554321 358999987 668888652 1
Q ss_pred CCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCCCccccccccccccccccccceeecccCcCCCCCc-ee
Q 021952 182 GFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRS-FH 260 (305)
Q Consensus 182 ~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~v~~~~~~p~~r~-~~ 260 (305)
.. + +++....++.++|.+... ..+..+|+.+. +..|+.-... .+..|. .-
T Consensus 165 ~~--~---~~~~~~~~g~~~v~~~~~------~~v~~~d~~tG----------------~~~w~~~~~~--~~~~~l~~~ 215 (276)
T 3no2_A 165 GT--P---FSSAFLDNGDCLVACGDA------HCFVQLNLESN----------------RIVRRVNAND--IEGVQLFFV 215 (276)
T ss_dssp SC--C---CEEEECTTSCEEEECBTT------SEEEEECTTTC----------------CEEEEEEGGG--SBSCCCSEE
T ss_pred CC--c---cceeEcCCCCEEEEeCCC------CeEEEEeCcCC----------------cEEEEecCCC--CCCcccccc
Confidence 11 1 223343567777776542 24899998866 6778754321 122222 22
Q ss_pred eeeeeCCCcEEEEEc
Q 021952 261 RACPDYSGRYLYVFG 275 (305)
Q Consensus 261 ~~~~~~~~~~i~v~G 275 (305)
..+....++.+||..
T Consensus 216 ~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 216 AQLFPLQNGGLYICN 230 (276)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred ccceEcCCCCEEEEe
Confidence 233333466788776
No 81
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=78.92 E-value=42 Score=31.32 Aligned_cols=151 Identities=9% Similarity=-0.009 Sum_probs=76.3
Q ss_pred ccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCC------CCccCcEEEEeccCCCCCc
Q 021952 41 NDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLY------GLRLGDTWVLELSENFCFG 114 (305)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~------~~~~~~~~~~d~~~~~~~~ 114 (305)
..++++|+ .+.+...... +..+....+.. +++.||...-.... ......+|++++.+.
T Consensus 155 ~~i~v~dl-------~tg~~~~~~~----~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~---- 218 (693)
T 3iuj_A 155 REIHLMDV-------ESKQPLETPL----KDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTA---- 218 (693)
T ss_dssp EEEEEEET-------TTCSEEEEEE----EEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSC----
T ss_pred EEEEEEEC-------CCCCCCcccc----CCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCC----
Confidence 46888888 5666554321 11222344455 55455544322110 023456899988775
Q ss_pred Ce--EEcccCCCCC--ccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCCCCCCCCccee
Q 021952 115 SW--QQLVTHPSPP--ARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGH 190 (305)
Q Consensus 115 ~W--~~~~~~~~p~--~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~ 190 (305)
+= ..+. ..+. +.....+....+++.+++.-.. ....+++|.+|+.++...|..+. .-.... .
T Consensus 219 ~~~~~~v~--~~~~~~~~~~~~~~~SpDg~~l~~~~~~--~~~~~~i~~~d~~~~~~~~~~l~--------~~~~~~--~ 284 (693)
T 3iuj_A 219 QEDDRLVF--GAIPAQHHRYVGATVTEDDRFLLISAAN--STSGNRLYVKDLSQENAPLLTVQ--------GDLDAD--V 284 (693)
T ss_dssp GGGCEEEE--SCSGGGCCSEEEEEECTTSCEEEEEEES--SSSCCEEEEEETTSTTCCCEEEE--------CSSSSC--E
T ss_pred cccceEEE--ecCCCCCeEEEEEEEcCCCCEEEEEEcc--CCCCcEEEEEECCCCCCceEEEe--------CCCCce--E
Confidence 32 1222 1111 2222233344455544443221 11236899999987334788874 111111 1
Q ss_pred EEEEEeCCEEEEEeccCCCCCccCcEEEEecCCC
Q 021952 191 SATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 224 (305)
Q Consensus 191 ~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~ 224 (305)
..+...++.||+....+.. ...|+++|+.+.
T Consensus 285 ~~~~~~g~~l~~~t~~~~~---~~~l~~~d~~~~ 315 (693)
T 3iuj_A 285 SLVDNKGSTLYLLTNRDAP---NRRLVTVDAANP 315 (693)
T ss_dssp EEEEEETTEEEEEECTTCT---TCEEEEEETTSC
T ss_pred EEEeccCCEEEEEECCCCC---CCEEEEEeCCCC
Confidence 1223367889888765432 456999998753
No 82
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=78.02 E-value=24 Score=27.88 Aligned_cols=104 Identities=11% Similarity=-0.070 Sum_probs=56.1
Q ss_pred cccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCCccCcEEEEeccC-CCCCcCeEE
Q 021952 40 HNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSE-NFCFGSWQQ 118 (305)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~-~~~~~~W~~ 118 (305)
...++.+|+ .+.+...+... ...-.+...-.+++.+++++. ..++++|+.+ . +...
T Consensus 21 ~~~i~~~d~-------~~~~~~~~~~~-----~~~v~~~~~spdg~~l~~~~~-------~~i~~~d~~~~~----~~~~ 77 (297)
T 2ojh_A 21 RSSIEIFNI-------RTRKMRVVWQT-----PELFEAPNWSPDGKYLLLNSE-------GLLYRLSLAGDP----SPEK 77 (297)
T ss_dssp CEEEEEEET-------TTTEEEEEEEE-----SSCCEEEEECTTSSEEEEEET-------TEEEEEESSSCC----SCEE
T ss_pred ceeEEEEeC-------CCCceeeeccC-----CcceEeeEECCCCCEEEEEcC-------CeEEEEeCCCCC----CceE
Confidence 456888888 55555544321 111223333334456666542 3689999988 6 6655
Q ss_pred cccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEe
Q 021952 119 LVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 172 (305)
Q Consensus 119 ~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~ 172 (305)
+. .......-.++....+++.+++++... .....+|.+++.+ ..-..+
T Consensus 78 ~~--~~~~~~~~~~~~~spdg~~l~~~~~~~--~~~~~l~~~~~~~--~~~~~~ 125 (297)
T 2ojh_A 78 VD--TGFATICNNDHGISPDGALYAISDKVE--FGKSAIYLLPSTG--GTPRLM 125 (297)
T ss_dssp CC--CTTCCCBCSCCEECTTSSEEEEEECTT--TSSCEEEEEETTC--CCCEEC
T ss_pred ec--cccccccccceEECCCCCEEEEEEeCC--CCcceEEEEECCC--CceEEe
Confidence 54 222112222344444566666665321 1345799999887 665555
No 83
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=77.90 E-value=26 Score=28.39 Aligned_cols=105 Identities=6% Similarity=0.059 Sum_probs=52.6
Q ss_pred CCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEc
Q 021952 83 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDV 162 (305)
Q Consensus 83 ~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~ 162 (305)
++.+++.|+.+ ..+.++|+.+. +-...-. ....+ -.++....++.+++.|+.+ ..+..+|+
T Consensus 118 ~~~~l~s~~~d------~~i~iwd~~~~----~~~~~~~-~~~~~--v~~~~~~~~~~~l~~~~~d------~~i~~wd~ 178 (312)
T 4ery_A 118 QSNLIVSGSFD------ESVRIWDVKTG----KCLKTLP-AHSDP--VSAVHFNRDGSLIVSSSYD------GLCRIWDT 178 (312)
T ss_dssp SSSEEEEEETT------SCEEEEETTTC----CEEEEEC-CCSSC--EEEEEECTTSSEEEEEETT------SCEEEEET
T ss_pred CCCEEEEEeCC------CcEEEEECCCC----EEEEEec-CCCCc--EEEEEEcCCCCEEEEEeCC------CcEEEEEC
Confidence 34566777642 24888998875 3322211 10111 1122333345677777654 24888999
Q ss_pred cccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 163 YEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 163 ~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
.+ .+..... .....+... ......++..++.|+.+. .+.+||+.
T Consensus 179 ~~--~~~~~~~-------~~~~~~~~~-~~~~~~~~~~l~~~~~d~------~i~iwd~~ 222 (312)
T 4ery_A 179 AS--GQCLKTL-------IDDDNPPVS-FVKFSPNGKYILAATLDN------TLKLWDYS 222 (312)
T ss_dssp TT--CCEEEEE-------CCSSCCCEE-EEEECTTSSEEEEEETTT------EEEEEETT
T ss_pred CC--CceeeEE-------eccCCCceE-EEEECCCCCEEEEEcCCC------eEEEEECC
Confidence 87 5432221 011111111 122224566777776643 48888987
No 84
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=77.62 E-value=43 Score=30.70 Aligned_cols=76 Identities=13% Similarity=0.145 Sum_probs=45.3
Q ss_pred EEecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCC-CCccC---CCeeEEEeCCEEEEEcccCCCCccc
Q 021952 79 CCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPS-PPARS---GHSLTRIGGNRTVLFGGRGVGYEVL 154 (305)
Q Consensus 79 ~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~-p~~r~---~~~~~~~~~~~i~v~GG~~~~~~~~ 154 (305)
++.++ .+|+.... +.++.+|.++. ...|+.-..... ..+.+ ....++. ++++|+....
T Consensus 65 ~v~~g-~vyv~~~~-------~~v~AlD~~tG--~~~W~~~~~~~~~~~~~~~~~~~g~a~~-~~~v~~~t~d------- 126 (582)
T 1flg_A 65 IVSDG-VIYVTASY-------SRLFALDAKTG--KRLWTYNHRLPDDIRPCCDVVNRGAAIY-GDKVFFGTLD------- 126 (582)
T ss_dssp EEETT-EEEEEETT-------TEEEEEESSSC--CEEEEEECCCCTTCCCSSCSCCCCCEEE-TTEEEEEETT-------
T ss_pred EEECC-EEEEEcCC-------CCEEEEECCCC--cEEEEEcCCCCcccccccccCCCccEEE-CCEEEEEeCC-------
Confidence 44454 89987652 13899999875 346887541111 10111 1233444 5788775321
Q ss_pred ceeEEEEccccceeEEEe
Q 021952 155 NDVWFLDVYEGFFKWVQI 172 (305)
Q Consensus 155 ~~~~~~d~~~~~~~W~~~ 172 (305)
..++.+|.+++...|+.-
T Consensus 127 g~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 127 ASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp TEEEEEESSSCCEEEEEE
T ss_pred CEEEEEECCCCCEEeeec
Confidence 359999999987899865
No 85
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=77.59 E-value=32 Score=29.23 Aligned_cols=64 Identities=8% Similarity=0.025 Sum_probs=32.9
Q ss_pred CCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEe-CCEEEEEcc-cCCCCcccceeEEE
Q 021952 83 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIG-GNRTVLFGG-RGVGYEVLNDVWFL 160 (305)
Q Consensus 83 ~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~-~~~i~v~GG-~~~~~~~~~~~~~~ 160 (305)
++.+++.|+.+ ..+.++|+.+. +-..... .. ...-.+++... +..+++.|| ... ..+..|
T Consensus 228 ~~~~l~s~~~d------~~v~iwd~~~~----~~~~~~~-~~--~~~v~~~~~~p~~~~ll~~~~gs~d-----~~i~i~ 289 (401)
T 4aez_A 228 DGLQLASGGND------NVVQIWDARSS----IPKFTKT-NH--NAAVKAVAWCPWQSNLLATGGGTMD-----KQIHFW 289 (401)
T ss_dssp TSSEEEEEETT------SCEEEEETTCS----SEEEEEC-CC--SSCCCEEEECTTSTTEEEEECCTTT-----CEEEEE
T ss_pred CCCEEEEEeCC------CeEEEccCCCC----CccEEec-CC--cceEEEEEECCCCCCEEEEecCCCC-----CEEEEE
Confidence 44677777752 35889998875 3222111 11 11112233332 235666664 221 358899
Q ss_pred Eccc
Q 021952 161 DVYE 164 (305)
Q Consensus 161 d~~~ 164 (305)
|+.+
T Consensus 290 d~~~ 293 (401)
T 4aez_A 290 NAAT 293 (401)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 9987
No 86
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=76.40 E-value=33 Score=28.78 Aligned_cols=68 Identities=16% Similarity=0.162 Sum_probs=34.8
Q ss_pred EEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCcc
Q 021952 134 TRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRK 213 (305)
Q Consensus 134 ~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~ 213 (305)
+...+++.++.|+.+ ..+..+|+++ .+-...- ..........++...++.+++.++.+.
T Consensus 146 ~~spdg~~l~sgs~d------g~v~iwd~~~--~~~~~~~--------~~h~~~v~~v~~s~~~~~~~~s~~~dg----- 204 (357)
T 4g56_B 146 SVFSDGTQAVSGGKD------FSVKVWDLSQ--KAVLKSY--------NAHSSEVNCVAACPGKDTIFLSCGEDG----- 204 (357)
T ss_dssp EECSSSSEEEEEETT------SCEEEEETTT--TEEEEEE--------CCCSSCEEEEEECTTCSSCEEEEETTS-----
T ss_pred EECCCCCEEEEEeCC------CeEEEEECCC--CcEEEEE--------cCCCCCEEEEEEccCCCceeeeeccCC-----
Confidence 334456677777764 2488899987 4433221 111111111111112345777777654
Q ss_pred CcEEEEecCC
Q 021952 214 DDFWVLDTKA 223 (305)
Q Consensus 214 ~~~~~~d~~~ 223 (305)
.+.++|+.+
T Consensus 205 -~v~~wd~~~ 213 (357)
T 4g56_B 205 -RILLWDTRK 213 (357)
T ss_dssp -CEEECCTTS
T ss_pred -ceEEEECCC
Confidence 377778763
No 87
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=76.30 E-value=50 Score=30.80 Aligned_cols=132 Identities=14% Similarity=0.098 Sum_probs=69.8
Q ss_pred ceeEEEECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCC--CCCC---CCceeEEecCCEEEEEec
Q 021952 17 GHTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIA--PPAR---GAHAACCIDNRKMVIHAG 91 (305)
Q Consensus 17 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~--p~~r---~~~~~~~~~~~~lyv~GG 91 (305)
..+-++.+++||+... ...++.+|.. .-+..|+.-...... +... .....++.++ ++|+...
T Consensus 59 ~~~P~v~~g~vyv~~~-------~~~v~AlD~~-----tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~v~~~ 125 (668)
T 1kv9_A 59 EATPLFHDGVIYTSMS-------WSRVIAVDAA-----SGKELWRYDPEVAKVKARTSCCDAVNRGVALWGD-KVYVGTL 125 (668)
T ss_dssp CCCCEEETTEEEEEEG-------GGEEEEEETT-----TCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBT-EEEEECT
T ss_pred ccCCEEECCEEEEECC-------CCeEEEEECC-----CChhceEECCCCCccccccccccCCccceEEECC-EEEEEcC
Confidence 3455677999998754 2357778771 134568763211100 0000 0112233444 7777432
Q ss_pred cCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEE
Q 021952 92 IGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQ 171 (305)
Q Consensus 92 ~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~ 171 (305)
-..++.+|.++. ...|+.-............+.++. ++.+|+..+. .....-..++.||.+++...|+.
T Consensus 126 -------dg~l~alD~~tG--~~~W~~~~~~~~~~~~~~~~P~v~-~~~v~vg~~~-~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 126 -------DGRLIALDAKTG--KAIWSQQTTDPAKPYSITGAPRVV-KGKVIIGNGG-AEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp -------TSEEEEEETTTC--CEEEEEECSCTTSSCBCCSCCEEE-TTEEEECCBC-TTTCCBCEEEEEETTTCCEEEEE
T ss_pred -------CCEEEEEECCCC--CEeeeeccCCCCCcceecCCCEEE-CCEEEEeCCC-CCcCCCCEEEEEECCCCcEEEEe
Confidence 135899998875 356876541111111222334444 5677664322 12123356999999997788987
Q ss_pred e
Q 021952 172 I 172 (305)
Q Consensus 172 ~ 172 (305)
-
T Consensus 195 ~ 195 (668)
T 1kv9_A 195 Y 195 (668)
T ss_dssp E
T ss_pred c
Confidence 5
No 88
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=76.00 E-value=30 Score=28.05 Aligned_cols=83 Identities=6% Similarity=-0.061 Sum_probs=49.4
Q ss_pred CcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCC
Q 021952 100 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNI 179 (305)
Q Consensus 100 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~ 179 (305)
..+..||++-+ ..|+.-.. . ..+++....++.+++.+... ..+..||+.++...|+.-.
T Consensus 146 ~~v~~~d~~G~---~~w~~~~~-~-----~~~~~~~~~~g~~~v~~~~~------~~v~~~d~~tG~~~w~~~~------ 204 (276)
T 3no2_A 146 SEVREIAPNGQ---LLNSVKLS-G-----TPFSSAFLDNGDCLVACGDA------HCFVQLNLESNRIVRRVNA------ 204 (276)
T ss_dssp TEEEEECTTSC---EEEEEECS-S-----CCCEEEECTTSCEEEECBTT------SEEEEECTTTCCEEEEEEG------
T ss_pred CEEEEECCCCC---EEEEEECC-C-----CccceeEcCCCCEEEEeCCC------CeEEEEeCcCCcEEEEecC------
Confidence 45899998743 56765431 1 12344555566788776542 3599999998768888753
Q ss_pred CCCCCCCcc--eeEEEEEeCCEEEEEe
Q 021952 180 PAGFSLPRV--GHSATLILGGRVLIYG 204 (305)
Q Consensus 180 ~~~~p~~r~--~~~~~~~~~~~l~v~G 204 (305)
...+..+. -.++....++.+||..
T Consensus 205 -~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 205 -NDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp -GGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred -CCCCCccccccccceEcCCCCEEEEe
Confidence 11121122 2333344678888886
No 89
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=75.63 E-value=31 Score=28.06 Aligned_cols=52 Identities=6% Similarity=-0.037 Sum_probs=25.3
Q ss_pred CcEEEEecc--CCCCCcCeEEcccCCCCCccCCCeeEEEeCCE-EEEEcccCCCCcccceeEEEEcc
Q 021952 100 GDTWVLELS--ENFCFGSWQQLVTHPSPPARSGHSLTRIGGNR-TVLFGGRGVGYEVLNDVWFLDVY 163 (305)
Q Consensus 100 ~~~~~~d~~--~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~-i~v~GG~~~~~~~~~~~~~~d~~ 163 (305)
..+.+|+++ ++ ++..+..-..+ ..-..++...+++ +|+.+... ..+.+||+.
T Consensus 60 ~~v~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~------~~i~~~d~~ 114 (343)
T 1ri6_A 60 FRVLAYRIAPDDG----ALTFAAESALP--GSLTHISTDHQGQFVFVGSYNA------GNVSVTRLE 114 (343)
T ss_dssp TEEEEEEECTTTC----CEEEEEEEECS--SCCSEEEECTTSSEEEEEETTT------TEEEEEEEE
T ss_pred CeEEEEEecCCCC----ceeeccccccC--CCCcEEEEcCCCCEEEEEecCC------CeEEEEECC
Confidence 356777766 55 66655411111 1223344444444 55544321 347888884
No 90
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=75.62 E-value=34 Score=28.47 Aligned_cols=108 Identities=8% Similarity=0.067 Sum_probs=54.0
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcc-cCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLV-THPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFL 160 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~-~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~ 160 (305)
.++++++.||.+ ..+.++|..++ +|.... .... ....-.+++...++..++.|+.+. .+..+
T Consensus 26 p~g~~las~~~D------~~i~iw~~~~~----~~~~~~~~~~~-h~~~v~~~~~sp~g~~l~s~s~D~------~v~iw 88 (345)
T 3fm0_A 26 PAGTLLASCGGD------RRIRIWGTEGD----SWICKSVLSEG-HQRTVRKVAWSPCGNYLASASFDA------TTCIW 88 (345)
T ss_dssp TTSSCEEEEETT------SCEEEEEEETT----EEEEEEEECSS-CSSCEEEEEECTTSSEEEEEETTS------CEEEE
T ss_pred CCCCEEEEEcCC------CeEEEEEcCCC----cceeeeeeccc-cCCcEEEEEECCCCCEEEEEECCC------cEEEE
Confidence 344677777752 24777888776 664332 1010 111112233334566777777642 36677
Q ss_pred EccccceeEEEeccccCCCCCCCCCCcceeEEEEE-eCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 161 DVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLI-LGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 161 d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
|+.+ ..+..+. .+......-.++.. .++.+++.|+.+. .+.++|+.
T Consensus 89 ~~~~--~~~~~~~--------~~~~h~~~v~~v~~sp~~~~l~s~s~D~------~v~iwd~~ 135 (345)
T 3fm0_A 89 KKNQ--DDFECVT--------TLEGHENEVKSVAWAPSGNLLATCSRDK------SVWVWEVD 135 (345)
T ss_dssp EECC--C-EEEEE--------EECCCSSCEEEEEECTTSSEEEEEETTS------CEEEEEEC
T ss_pred EccC--CCeEEEE--------EccCCCCCceEEEEeCCCCEEEEEECCC------eEEEEECC
Confidence 7766 5444332 11111111112222 4567788887754 37777776
No 91
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=75.48 E-value=31 Score=27.94 Aligned_cols=103 Identities=16% Similarity=0.035 Sum_probs=54.3
Q ss_pred CCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEc
Q 021952 83 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDV 162 (305)
Q Consensus 83 ~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~ 162 (305)
++..++.|+. + ..+.++|+.+. +-.... ..+.+ -.+++...++..++.|+.+ ..+..||+
T Consensus 194 ~~~~l~~~~~--d----g~i~~~d~~~~----~~~~~~--~~~~~--v~~~~~s~~~~~l~~~~~~------~~i~~~~~ 253 (337)
T 1gxr_A 194 DGTKLWTGGL--D----NTVRSWDLREG----RQLQQH--DFTSQ--IFSLGYCPTGEWLAVGMES------SNVEVLHV 253 (337)
T ss_dssp TSSEEEEEET--T----SEEEEEETTTT----EEEEEE--ECSSC--EEEEEECTTSSEEEEEETT------SCEEEEET
T ss_pred CCCEEEEEec--C----CcEEEEECCCC----ceEeee--cCCCc--eEEEEECCCCCEEEEEcCC------CcEEEEEC
Confidence 4456666664 2 35889998875 322221 11111 1233344456677777653 24889999
Q ss_pred cccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 163 YEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 163 ~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
.+ ..-..+. ....+ -.+.....++.+++.++.++ .+.++|+.+
T Consensus 254 ~~--~~~~~~~--------~~~~~--v~~~~~~~~~~~l~~~~~dg------~i~~~~~~~ 296 (337)
T 1gxr_A 254 NK--PDKYQLH--------LHESC--VLSLKFAYCGKWFVSTGKDN------LLNAWRTPY 296 (337)
T ss_dssp TS--SCEEEEC--------CCSSC--EEEEEECTTSSEEEEEETTS------EEEEEETTT
T ss_pred CC--CCeEEEc--------CCccc--eeEEEECCCCCEEEEecCCC------cEEEEECCC
Confidence 88 4433331 11111 11222224567777777643 488899873
No 92
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=74.64 E-value=37 Score=28.43 Aligned_cols=56 Identities=11% Similarity=0.127 Sum_probs=30.1
Q ss_pred ceeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEe-CCEEEEEeccCCCCCccCcEEEEecC
Q 021952 155 NDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLIL-GGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 155 ~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
..++.+|+.+ ++-..+. . ......+.... - +++.+++............+|.+|..
T Consensus 168 ~~l~~~d~~~--g~~~~l~--------~-~~~~~~~~~~s-p~dg~~l~~~~~~~~~~~~~~l~~~d~~ 224 (388)
T 3pe7_A 168 CRLMRVDLKT--GESTVIL--------Q-ENQWLGHPIYR-PYDDSTVAFCHEGPHDLVDARMWLINED 224 (388)
T ss_dssp EEEEEEETTT--CCEEEEE--------E-ESSCEEEEEEE-TTEEEEEEEEECSCTTTSSCSEEEEETT
T ss_pred ceEEEEECCC--CceEEee--------c-CCccccccEEC-CCCCCEEEEEEecCCCCCcceEEEEeCC
Confidence 5799999998 6655552 1 11122333322 3 45544444332222235579999986
No 93
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=74.25 E-value=38 Score=28.39 Aligned_cols=69 Identities=13% Similarity=0.119 Sum_probs=36.3
Q ss_pred eEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCc
Q 021952 133 LTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRR 212 (305)
Q Consensus 133 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~ 212 (305)
++...+++.++.|+.+ ..+..+|+++ ++-...- ... .......++...+..+++.|+.+.
T Consensus 133 v~~spdg~~l~sgs~d------~~i~iwd~~~--~~~~~~~-------~~h-~~~V~~~~~~~~~~~~l~s~s~D~---- 192 (344)
T 4gqb_B 133 VSVLSSGTQAVSGSKD------ICIKVWDLAQ--QVVLSSY-------RAH-AAQVTCVAASPHKDSVFLSCSEDN---- 192 (344)
T ss_dssp EEECTTSSEEEEEETT------SCEEEEETTT--TEEEEEE-------CCC-SSCEEEEEECSSCTTEEEEEETTS----
T ss_pred EEECCCCCEEEEEeCC------CeEEEEECCC--CcEEEEE-------cCc-CCceEEEEecCCCCCceeeecccc----
Confidence 3334456777777764 2488899988 4332221 011 111111121112345778887754
Q ss_pred cCcEEEEecCC
Q 021952 213 KDDFWVLDTKA 223 (305)
Q Consensus 213 ~~~~~~~d~~~ 223 (305)
.|.++|+.+
T Consensus 193 --~v~iwd~~~ 201 (344)
T 4gqb_B 193 --RILLWDTRC 201 (344)
T ss_dssp --CEEEEETTS
T ss_pred --ccccccccc
Confidence 378889873
No 94
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=73.91 E-value=34 Score=27.68 Aligned_cols=110 Identities=15% Similarity=0.045 Sum_probs=53.0
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
.++++++.|+ + ..+.++|+.+.........+. .......-.+++...++..++.|+.+ ..+..+|
T Consensus 61 ~~~~~l~~~~-d------g~i~iw~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~~d 125 (337)
T 1gxr_A 61 NPTRHVYTGG-K------GCVKVWDISHPGNKSPVSQLD--CLNRDNYIRSCKLLPDGCTLIVGGEA------STLSIWD 125 (337)
T ss_dssp SSSSEEEEEC-B------SEEEEEETTSTTCCSCSEEEE--CSCTTSBEEEEEECTTSSEEEEEESS------SEEEEEE
T ss_pred cCCcEEEEcC-C------CeEEEEECCCCCceeeeeccc--ccCCCCcEEEEEEcCCCCEEEEEcCC------CcEEEEE
Confidence 4446666665 2 347888887751111112221 00111112233344455667777653 3588999
Q ss_pred ccccceeEEEeccccCCCCCCCCCCcc-eeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 162 VYEGFFKWVQIPYELQNIPAGFSLPRV-GHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 162 ~~~~~~~W~~~~~~~~~~~~~~p~~r~-~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
+.+ .+..... .+..... ..+.....++.+++.|+.+. .+.++|+.
T Consensus 126 ~~~--~~~~~~~--------~~~~~~~~i~~~~~~~~~~~l~~~~~dg------~v~~~d~~ 171 (337)
T 1gxr_A 126 LAA--PTPRIKA--------ELTSSAPACYALAISPDSKVCFSCCSDG------NIAVWDLH 171 (337)
T ss_dssp CCC--C--EEEE--------EEECSSSCEEEEEECTTSSEEEEEETTS------CEEEEETT
T ss_pred CCC--CCcceee--------ecccCCCceEEEEECCCCCEEEEEeCCC------cEEEEeCC
Confidence 988 5533321 1111111 11222223566777777653 38889987
No 95
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=73.22 E-value=36 Score=27.75 Aligned_cols=64 Identities=9% Similarity=0.132 Sum_probs=36.0
Q ss_pred CCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCC-EEEEEcccCCCCcccceeEEEE
Q 021952 83 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGN-RTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 83 ~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~-~i~v~GG~~~~~~~~~~~~~~d 161 (305)
++++|+.++. .+.++++|+.++ +....- ..+.....+.++...++ .+|+.+... ..++++|
T Consensus 10 ~~~~~v~~~~------~~~v~~~d~~~~----~~~~~~--~~~~~~~~~~~~~s~dg~~~~v~~~~~------~~i~~~d 71 (349)
T 1jmx_B 10 GHEYMIVTNY------PNNLHVVDVASD----TVYKSC--VMPDKFGPGTAMMAPDNRTAYVLNNHY------GDIYGID 71 (349)
T ss_dssp TCEEEEEEET------TTEEEEEETTTT----EEEEEE--ECSSCCSSCEEEECTTSSEEEEEETTT------TEEEEEE
T ss_pred CCEEEEEeCC------CCeEEEEECCCC----cEEEEE--ecCCCCCCceeEECCCCCEEEEEeCCC------CcEEEEe
Confidence 3478887764 245899999886 443222 11110012344444344 567665332 4699999
Q ss_pred ccc
Q 021952 162 VYE 164 (305)
Q Consensus 162 ~~~ 164 (305)
+.+
T Consensus 72 ~~t 74 (349)
T 1jmx_B 72 LDT 74 (349)
T ss_dssp TTT
T ss_pred CCC
Confidence 988
No 96
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=72.45 E-value=67 Score=30.45 Aligned_cols=96 Identities=9% Similarity=0.018 Sum_probs=48.8
Q ss_pred cEEEEeccCCCCCcCeEEcccCCCCCcc---CCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccC
Q 021952 101 DTWVLELSENFCFGSWQQLVTHPSPPAR---SGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQ 177 (305)
Q Consensus 101 ~~~~~d~~~~~~~~~W~~~~~~~~p~~r---~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~ 177 (305)
-+++||++++ +|+.......+... .-.++....++.+++... ..+++||..+ .++ .....
T Consensus 472 Gl~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--------~Gl~~~~~~~--~~~-~~~~~-- 534 (795)
T 4a2l_A 472 ALVRFNPEQR----SFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--------EGLSVFKQEG--LDI-QKASI-- 534 (795)
T ss_dssp CEEEEETTTT----EEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--------SCEEEEEEET--TEE-EECCC--
T ss_pred ceeEEeCCCC----eEEEccccccccccCCceEEEEEECCCCCEEEEeC--------CceEEEeCCC--CeE-EEecC--
Confidence 3899999987 88877521111111 112233333456776432 2388999988 777 44200
Q ss_pred CCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 178 NIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 178 ~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
.....++.... .+.+...++.|++-.. . .+++||+.
T Consensus 535 ~~~~~l~~~~i-~~i~~d~~g~lWigT~-~-------Gl~~~d~~ 570 (795)
T 4a2l_A 535 LPVSNVTKLFT-NCIYEASNGIIWVGTR-E-------GFYCFNEK 570 (795)
T ss_dssp SCSCGGGGSCE-EEEEECTTSCEEEEES-S-------CEEEEETT
T ss_pred CCCCCCCCCee-EEEEECCCCCEEEEeC-C-------CceeECCC
Confidence 00011222211 2222224567777442 1 28889987
No 97
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=72.03 E-value=60 Score=29.72 Aligned_cols=101 Identities=9% Similarity=-0.074 Sum_probs=51.1
Q ss_pred cCcEEEEeccC------CCCCcCeEEcc-cCCCCCccCCCeeEEEeCCEEEEEcccCCCCc--ccceeEEEEcc-ccce-
Q 021952 99 LGDTWVLELSE------NFCFGSWQQLV-THPSPPARSGHSLTRIGGNRTVLFGGRGVGYE--VLNDVWFLDVY-EGFF- 167 (305)
Q Consensus 99 ~~~~~~~d~~~------~~~~~~W~~~~-~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~--~~~~~~~~d~~-~~~~- 167 (305)
..+++++|+.+ . +...+. .+. ..........+++.+++........ ...+++.+|+. + +
T Consensus 160 ~~~i~~~~~~~~~~~~~~----~~~~l~~~~~----~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~--g~ 229 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRS----AVRELSDDAH----RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTED--GR 229 (662)
T ss_dssp EEEEEEEETTSTTTTCGG----GSEESSCSCS----SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTT--SC
T ss_pred eeEEEEEECCCCccccCC----ceeEEEecCC----CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCC--Cc
Confidence 46899999987 5 444443 211 1222233444555555544322111 13579999998 5 5
Q ss_pred --eEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 168 --KWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 168 --~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
....+. .-. ..........-++++++.+..+. ...+|++|+.
T Consensus 230 ~~~~~~l~--------~~~-~~~~~~~~~spdg~l~~~~~~~~----~~~l~~~~~~ 273 (662)
T 3azo_A 230 FADTRTLL--------GGP-EEAIAQAEWAPDGSLIVATDRTG----WWNLHRVDPA 273 (662)
T ss_dssp EEEEEEEE--------EET-TBCEEEEEECTTSCEEEEECTTS----SCEEEEECTT
T ss_pred ccccEEeC--------CCC-CceEcceEECCCCeEEEEECCCC----CeEEEEEECC
Confidence 444442 100 11111222223566776665432 3469999986
No 98
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=71.56 E-value=41 Score=27.67 Aligned_cols=67 Identities=6% Similarity=-0.050 Sum_probs=33.8
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCE-EEEEcccCCCCcccceeEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNR-TVLFGGRGVGYEVLNDVWFL 160 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~-i~v~GG~~~~~~~~~~~~~~ 160 (305)
.++++|+.+..+ ....+++||++++ +++.+.... .....-..++...+++ +|+.+... ..+.+|
T Consensus 49 pdg~l~~~~~~~----~~~~v~~~~~~~g----~~~~~~~~~-~~~~~p~~~a~spdg~~l~~~~~~~------~~v~v~ 113 (347)
T 3hfq_A 49 AKDCLYSVDKED----DEGGIAAWQIDGQ----TAHKLNTVV-APGTPPAYVAVDEARQLVYSANYHK------GTAEVM 113 (347)
T ss_dssp TTCEEEEEEEET----TEEEEEEEEEETT----EEEEEEEEE-EESCCCSEEEEETTTTEEEEEETTT------TEEEEE
T ss_pred cCCeEEEEEecC----CCceEEEEEecCC----cEEEeeeee-cCCCCCEEEEECCCCCEEEEEeCCC------CEEEEE
Confidence 344677765421 1346899999776 665554100 0011122344444454 55554221 347777
Q ss_pred Ecc
Q 021952 161 DVY 163 (305)
Q Consensus 161 d~~ 163 (305)
|+.
T Consensus 114 ~~~ 116 (347)
T 3hfq_A 114 KIA 116 (347)
T ss_dssp EEC
T ss_pred EeC
Confidence 774
No 99
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=69.01 E-value=44 Score=26.97 Aligned_cols=109 Identities=10% Similarity=0.134 Sum_probs=53.9
Q ss_pred CCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEc
Q 021952 83 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDV 162 (305)
Q Consensus 83 ~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~ 162 (305)
++.+++.|+.+ ..+.++|+.+. +...........+ -..+....++..++.|+.+ ..+..||+
T Consensus 160 ~~~~l~~~~~d------~~i~~wd~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d------~~i~iwd~ 221 (312)
T 4ery_A 160 DGSLIVSSSYD------GLCRIWDTASG----QCLKTLIDDDNPP--VSFVKFSPNGKYILAATLD------NTLKLWDY 221 (312)
T ss_dssp TSSEEEEEETT------SCEEEEETTTC----CEEEEECCSSCCC--EEEEEECTTSSEEEEEETT------TEEEEEET
T ss_pred CCCEEEEEeCC------CcEEEEECCCC----ceeeEEeccCCCc--eEEEEECCCCCEEEEEcCC------CeEEEEEC
Confidence 34677777642 24888998875 4322211010001 1123333345666666653 35889999
Q ss_pred cccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 163 YEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 163 ~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
.+ .+-.... .................++.+++.|+.++ .+.++|+.+
T Consensus 222 ~~--~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~sg~~dg------~i~vwd~~~ 268 (312)
T 4ery_A 222 SK--GKCLKTY------TGHKNEKYCIFANFSVTGGKWIVSGSEDN------LVYIWNLQT 268 (312)
T ss_dssp TT--TEEEEEE------CSSCCSSSCCCEEEECSSSCEEEECCTTS------CEEEEETTT
T ss_pred CC--CcEEEEE------EecCCceEEEEEEEEeCCCcEEEEECCCC------EEEEEECCC
Confidence 87 4432221 01111111111122224567777777654 388889873
No 100
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=68.02 E-value=58 Score=27.98 Aligned_cols=104 Identities=13% Similarity=0.121 Sum_probs=52.0
Q ss_pred ecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEE
Q 021952 81 IDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFL 160 (305)
Q Consensus 81 ~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~ 160 (305)
.++ ..++.|+. + ..+.++|+.+. +-...-.+. .....+.... +..++.|+.+ ..+..+
T Consensus 287 ~~~-~~l~~~~~--d----~~i~i~d~~~~----~~~~~~~~~----~~~v~~~~~~-~~~l~~~~~d------g~i~vw 344 (445)
T 2ovr_B 287 FDG-IHVVSGSL--D----TSIRVWDVETG----NCIHTLTGH----QSLTSGMELK-DNILVSGNAD------STVKIW 344 (445)
T ss_dssp ECS-SEEEEEET--T----SCEEEEETTTC----CEEEEECCC----CSCEEEEEEE-TTEEEEEETT------SCEEEE
T ss_pred ECC-CEEEEEeC--C----CeEEEEECCCC----CEEEEEcCC----cccEEEEEEe-CCEEEEEeCC------CeEEEE
Confidence 344 56666664 2 34889998876 322221111 1111222333 3456666653 248899
Q ss_pred EccccceeE-EEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 161 DVYEGFFKW-VQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 161 d~~~~~~~W-~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
|+.+ .+- ..+. .... ....-.++. .++.+++.|+.++ .+.++|+.+
T Consensus 345 d~~~--~~~~~~~~-------~~~~-~~~~v~~~~-~~~~~l~s~~~dg------~v~iwd~~~ 391 (445)
T 2ovr_B 345 DIKT--GQCLQTLQ-------GPNK-HQSAVTCLQ-FNKNFVITSSDDG------TVKLWDLKT 391 (445)
T ss_dssp ETTT--CCEEEEEC-------STTS-CSSCEEEEE-ECSSEEEEEETTS------EEEEEETTT
T ss_pred ECCC--CcEEEEEc-------cCCC-CCCCEEEEE-ECCCEEEEEeCCC------eEEEEECCC
Confidence 9987 432 2221 1100 111122223 3567777787654 488899873
No 101
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=67.93 E-value=44 Score=26.58 Aligned_cols=113 Identities=8% Similarity=0.047 Sum_probs=58.7
Q ss_pred ceeEEecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEccc-CCCCCccCCCeeEEEeCCEEEEEcccCCCCccc
Q 021952 76 HAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVT-HPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVL 154 (305)
Q Consensus 76 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~-~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~ 154 (305)
+.++...++++|+.... ...+++||.+.. ....+.. ... ..-..++...++.+|+.... .
T Consensus 124 ~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~----~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~~------~ 184 (286)
T 1q7f_A 124 RGVTVDNKGRIIVVECK------VMRVIIFDQNGN----VLHKFGCSKHL---EFPNGVVVNDKQEIFISDNR------A 184 (286)
T ss_dssp EEEEECTTSCEEEEETT------TTEEEEECTTSC----EEEEEECTTTC---SSEEEEEECSSSEEEEEEGG------G
T ss_pred eEEEEeCCCCEEEEECC------CCEEEEEcCCCC----EEEEeCCCCcc---CCcEEEEECCCCCEEEEECC------C
Confidence 34444445578886542 245889987654 3333321 111 11233445555788887543 2
Q ss_pred ceeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 155 NDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 155 ~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
+.+.+||... .....+. ..+.+..| ...+...++.+|+....+. ..|.+||..
T Consensus 185 ~~i~~~~~~g--~~~~~~~-----~~g~~~~p---~~i~~d~~G~l~v~~~~~~-----~~i~~~~~~ 237 (286)
T 1q7f_A 185 HCVKVFNYEG--QYLRQIG-----GEGITNYP---IGVGINSNGEILIADNHNN-----FNLTIFTQD 237 (286)
T ss_dssp TEEEEEETTC--CEEEEES-----CTTTSCSE---EEEEECTTCCEEEEECSSS-----CEEEEECTT
T ss_pred CEEEEEcCCC--CEEEEEc-----cCCccCCC---cEEEECCCCCEEEEeCCCC-----EEEEEECCC
Confidence 4689999865 5444442 11111111 2233324677888764421 158888865
No 102
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=67.83 E-value=58 Score=27.89 Aligned_cols=66 Identities=12% Similarity=0.057 Sum_probs=33.9
Q ss_pred CCceeEEecCCEEEEEeccC--CCCCc-cCcEEEE-eccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcc
Q 021952 74 GAHAACCIDNRKMVIHAGIG--LYGLR-LGDTWVL-ELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGG 146 (305)
Q Consensus 74 ~~~~~~~~~~~~lyv~GG~~--~~~~~-~~~~~~~-d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG 146 (305)
..|+++...++.+|..|-.. .-+.. ......- .+.. .......++. .-..|+++...++.+|.+|-
T Consensus 222 ~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~-~~~~~v~~v~------~G~~hs~alt~~G~v~~wG~ 291 (389)
T 3kci_A 222 DAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVE------CGSQFSVALTKSGAVYTWGK 291 (389)
T ss_dssp SCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGG-GTTSCEEEEE------EETTEEEEEETTSCEEEEEC
T ss_pred CcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecc-cCCCcEEEEe------CCCCEEEEEeCCCeEEEEeC
Confidence 36888888878999998421 11100 1111100 0000 0001223332 23568888888889999984
No 103
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=67.52 E-value=56 Score=27.64 Aligned_cols=109 Identities=11% Similarity=0.053 Sum_probs=51.8
Q ss_pred ecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEE
Q 021952 81 IDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFL 160 (305)
Q Consensus 81 ~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~ 160 (305)
.++ .+++.|+.+ ..+.++|+.+.. ..-..+. ... ..-.++....++.+++.|+.+ ..+..+
T Consensus 184 ~~~-~~l~~~~~d------g~i~i~d~~~~~--~~~~~~~--~~~--~~v~~~~~~~~~~~l~s~~~d------~~v~iw 244 (401)
T 4aez_A 184 WNR-HVLSSGSRS------GAIHHHDVRIAN--HQIGTLQ--GHS--SEVCGLAWRSDGLQLASGGND------NVVQIW 244 (401)
T ss_dssp EET-TEEEEEETT------SEEEEEETTSSS--CEEEEEE--CCS--SCEEEEEECTTSSEEEEEETT------SCEEEE
T ss_pred ECC-CEEEEEcCC------CCEEEEecccCc--ceeeEEc--CCC--CCeeEEEEcCCCCEEEEEeCC------CeEEEc
Confidence 344 566666642 358888887530 0111111 111 111223333355677777764 248899
Q ss_pred EccccceeEEEeccccCCCCCCCCCCcceeEEEEE-eCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 161 DVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLI-LGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 161 d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
|+.+ ..-.... .....+ . .+.... .+..+++.||... ...+.++|+.+
T Consensus 245 d~~~--~~~~~~~-------~~~~~~-v-~~~~~~p~~~~ll~~~~gs~----d~~i~i~d~~~ 293 (401)
T 4aez_A 245 DARS--SIPKFTK-------TNHNAA-V-KAVAWCPWQSNLLATGGGTM----DKQIHFWNAAT 293 (401)
T ss_dssp ETTC--SSEEEEE-------CCCSSC-C-CEEEECTTSTTEEEEECCTT----TCEEEEEETTT
T ss_pred cCCC--CCccEEe-------cCCcce-E-EEEEECCCCCCEEEEecCCC----CCEEEEEECCC
Confidence 9987 3322211 011111 1 112221 2456777775222 23488899873
No 104
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=66.84 E-value=74 Score=28.72 Aligned_cols=100 Identities=12% Similarity=0.009 Sum_probs=49.6
Q ss_pred CcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCC
Q 021952 100 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNI 179 (305)
Q Consensus 100 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~ 179 (305)
..++++|..+.. .++-..++ ..+.-|..+...+++.++..+.. .+.+.++|+.+ ++-...- .
T Consensus 302 g~i~vvd~~~~~-~l~~~~i~-----~~~~~~~~~~spdg~~l~va~~~-----~~~v~v~D~~t--g~l~~~i-----~ 363 (543)
T 1nir_A 302 GKVLLVNYKDID-NLTVTSIG-----AAPFLHDGGWDSSHRYFMTAANN-----SNKVAVIDSKD--RRLSALV-----D 363 (543)
T ss_dssp TEEEEEECTTSS-SCEEEEEE-----CCSSCCCEEECTTSCEEEEEEGG-----GTEEEEEETTT--TEEEEEE-----E
T ss_pred CeEEEEEecCCC-cceeEEec-----cCcCccCceECCCCCEEEEEecC-----CCeEEEEECCC--CeEEEee-----c
Confidence 568899987641 11111222 13334445555455543333321 24688899998 5543321 1
Q ss_pred CCCCCCCcceeEEEEEe-CCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 180 PAGFSLPRVGHSATLIL-GGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 180 ~~~~p~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
.+..|.+..+. ....- .+.+|+.+.... +.|-++|..+
T Consensus 364 ~g~~ph~g~g~-~~~~p~~g~~~~s~~~~d-----~~V~v~d~~~ 402 (543)
T 1nir_A 364 VGKTPHPGRGA-NFVHPKYGPVWSTSHLGD-----GSISLIGTDP 402 (543)
T ss_dssp CSSSBCCTTCE-EEEETTTEEEEEEEBSSS-----SEEEEEECCT
T ss_pred cCCCCCCCCCc-ccCCCCCccEEEeccCCC-----ceEEEEEeCC
Confidence 13344442222 22222 367777765321 3477888763
No 105
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=66.54 E-value=57 Score=27.37 Aligned_cols=109 Identities=11% Similarity=0.050 Sum_probs=51.7
Q ss_pred CEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCC---ccCCCeeEEEeCC-EEEEEcccCCCCcccceeEE
Q 021952 84 RKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPP---ARSGHSLTRIGGN-RTVLFGGRGVGYEVLNDVWF 159 (305)
Q Consensus 84 ~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~---~r~~~~~~~~~~~-~i~v~GG~~~~~~~~~~~~~ 159 (305)
+.+++.|+.+ ..+.++|+.+. +.........+. ...-.+++...++ .+++.|+.+. ....+..
T Consensus 178 ~~~l~~~~~d------g~v~iwd~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~---~~~~i~~ 244 (416)
T 2pm9_A 178 AHVFASAGSS------NFASIWDLKAK----KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD---NDPSILI 244 (416)
T ss_dssp TTEEEEESSS------SCEEEEETTTT----EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS---SSCCCCE
T ss_pred CcEEEEEcCC------CCEEEEECCCC----CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCC---CCceEEE
Confidence 3677777642 34889999876 332222111000 1111223333332 4666665431 0124778
Q ss_pred EEccccceeEEEeccccCCCCCCCC-CCcceeEEEEE-e-CCEEEEEeccCCCCCccCcEEEEecC
Q 021952 160 LDVYEGFFKWVQIPYELQNIPAGFS-LPRVGHSATLI-L-GGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 160 ~d~~~~~~~W~~~~~~~~~~~~~~p-~~r~~~~~~~~-~-~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
||+++ ..- .+ ..+. .....-..+.. . ++.+++.|+.+. .+.++|+.
T Consensus 245 ~d~~~--~~~-~~--------~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg------~v~~wd~~ 293 (416)
T 2pm9_A 245 WDLRN--ANT-PL--------QTLNQGHQKGILSLDWCHQDEHLLLSSGRDN------TVLLWNPE 293 (416)
T ss_dssp EETTS--TTS-CS--------BCCCSCCSSCEEEEEECSSCSSCEEEEESSS------EEEEECSS
T ss_pred EeCCC--CCC-Cc--------EEeecCccCceeEEEeCCCCCCeEEEEeCCC------CEEEeeCC
Confidence 88877 320 01 1111 11111122222 2 677788887654 38888877
No 106
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=65.23 E-value=54 Score=26.59 Aligned_cols=109 Identities=7% Similarity=-0.133 Sum_probs=54.6
Q ss_pred CCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEe-cCCEEEEEeccCCCCCccCcE
Q 021952 24 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCI-DNRKMVIHAGIGLYGLRLGDT 102 (305)
Q Consensus 24 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~ 102 (305)
.+.+|+..... ..+.++|+ .+.+.......+ .. ...++.. +++.+|+.+.. ...+
T Consensus 9 ~~~~~v~~~~~------~~v~~~d~-------~~~~~~~~~~~~----~~-~~~~~~s~dg~~l~~~~~~------~~~i 64 (331)
T 3u4y_A 9 SNFGIVVEQHL------RRISFFST-------DTLEILNQITLG----YD-FVDTAITSDCSNVVVTSDF------CQTL 64 (331)
T ss_dssp CCEEEEEEGGG------TEEEEEET-------TTCCEEEEEECC----CC-EEEEEECSSSCEEEEEEST------TCEE
T ss_pred CCEEEEEecCC------CeEEEEeC-------cccceeeeEEcc----CC-cceEEEcCCCCEEEEEeCC------CCeE
Confidence 45677776543 36788888 555554433221 11 1122222 34457776542 1368
Q ss_pred EEEeccCCCCCcCe--EEcccCCCCCccCCCeeEEEeCC-EEEEEcccCCCCcccceeEEEEccccceeEE
Q 021952 103 WVLELSENFCFGSW--QQLVTHPSPPARSGHSLTRIGGN-RTVLFGGRGVGYEVLNDVWFLDVYEGFFKWV 170 (305)
Q Consensus 103 ~~~d~~~~~~~~~W--~~~~~~~~p~~r~~~~~~~~~~~-~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~ 170 (305)
+++|+.++ +. ..+..+..| .++++...++ .++ .+... .....++++|+.+ .+..
T Consensus 65 ~~~d~~~~----~~~~~~~~~~~~~----~~~~~~s~dg~~l~-~~~~~---~~~~~i~v~d~~~--~~~~ 121 (331)
T 3u4y_A 65 VQIETQLE----PPKVVAIQEGQSS----MADVDITPDDQFAV-TVTGL---NHPFNMQSYSFLK--NKFI 121 (331)
T ss_dssp EEEECSSS----SCEEEEEEECSSC----CCCEEECTTSSEEE-ECCCS---SSSCEEEEEETTT--TEEE
T ss_pred EEEECCCC----ceeEEecccCCCC----ccceEECCCCCEEE-EecCC---CCcccEEEEECCC--CCeE
Confidence 99999886 43 222222211 2223344344 455 43221 1112699999988 5443
No 107
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=65.10 E-value=66 Score=27.54 Aligned_cols=18 Identities=28% Similarity=0.519 Sum_probs=14.8
Q ss_pred CCceeEEecCCEEEEEec
Q 021952 74 GAHAACCIDNRKMVIHAG 91 (305)
Q Consensus 74 ~~~~~~~~~~~~lyv~GG 91 (305)
..|++++..++.+|..|-
T Consensus 168 ~~hs~alt~~G~v~~wG~ 185 (389)
T 3kci_A 168 GAHSACVTAAGDLYTWGK 185 (389)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred cCeEEEEeCCCeEEEeCC
Confidence 478888887779999984
No 108
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=64.92 E-value=53 Score=26.38 Aligned_cols=104 Identities=5% Similarity=-0.014 Sum_probs=51.9
Q ss_pred ccceeecccccccccccceEEecccCCCCCCCCCCceeEEecC-CEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEc
Q 021952 41 NDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDN-RKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQL 119 (305)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~ 119 (305)
..++++|+ .+.+++.+...........-+.++...+ +++|+.... +.+++||++ + +...+
T Consensus 46 ~~i~~~d~-------~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-------~~l~~~d~~-g----~~~~~ 106 (314)
T 1pjx_A 46 GEILRIDL-------KTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-------LGLLVVQTD-G----TFEEI 106 (314)
T ss_dssp CEEEEECT-------TTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-------TEEEEEETT-S----CEEEC
T ss_pred CEEEEEeC-------CCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-------CCEEEEeCC-C----CEEEE
Confidence 35788887 4666655432100001112233443344 588886542 258999988 6 66655
Q ss_pred -ccCC-CCCccCCCeeEEEeCCEEEEEcccC---------CCCcccceeEEEEcc
Q 021952 120 -VTHP-SPPARSGHSLTRIGGNRTVLFGGRG---------VGYEVLNDVWFLDVY 163 (305)
Q Consensus 120 -~~~~-~p~~r~~~~~~~~~~~~i~v~GG~~---------~~~~~~~~~~~~d~~ 163 (305)
.... ......-+.++...++.+|+..... ........++++|..
T Consensus 107 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 107 AKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp CSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred EeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 3111 1111223345555566788765321 011123468888875
No 109
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=64.85 E-value=57 Score=26.76 Aligned_cols=105 Identities=12% Similarity=0.117 Sum_probs=55.1
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
.++++++.|+.+ ..+.++|+.+. +-...-.+. . ..-.+++...++.+++.|+.+ ..+..+|
T Consensus 174 pdg~~lasg~~d------g~i~iwd~~~~----~~~~~~~~h-~--~~v~~l~~spd~~~l~s~s~d------g~i~iwd 234 (321)
T 3ow8_A 174 PDGKYLASGAID------GIINIFDIATG----KLLHTLEGH-A--MPIRSLTFSPDSQLLVTASDD------GYIKIYD 234 (321)
T ss_dssp TTSSEEEEEETT------SCEEEEETTTT----EEEEEECCC-S--SCCCEEEECTTSCEEEEECTT------SCEEEEE
T ss_pred CCCCEEEEEcCC------CeEEEEECCCC----cEEEEEccc-C--CceeEEEEcCCCCEEEEEcCC------CeEEEEE
Confidence 344677777652 34889999876 322211110 1 111234444456777877764 2488899
Q ss_pred ccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 162 VYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 162 ~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
+.+ ......- .... ... .+.....++.+++.|+.+. .+.++|+.
T Consensus 235 ~~~--~~~~~~~-------~~h~-~~v-~~~~~sp~~~~l~s~s~D~------~v~iwd~~ 278 (321)
T 3ow8_A 235 VQH--ANLAGTL-------SGHA-SWV-LNVAFCPDDTHFVSSSSDK------SVKVWDVG 278 (321)
T ss_dssp TTT--CCEEEEE-------CCCS-SCE-EEEEECTTSSEEEEEETTS------CEEEEETT
T ss_pred CCC--cceeEEE-------cCCC-Cce-EEEEECCCCCEEEEEeCCC------cEEEEeCC
Confidence 987 4433221 0111 111 1122223567778887754 37888887
No 110
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=64.05 E-value=60 Score=26.75 Aligned_cols=112 Identities=8% Similarity=-0.012 Sum_probs=55.0
Q ss_pred CEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCCccCcEEE
Q 021952 25 DCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWV 104 (305)
Q Consensus 25 ~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~ 104 (305)
+.+|+.+-.. ..++++|+ .+.+.+.+.. + ..-++.+...++++++... ..+++
T Consensus 61 ~~l~~~d~~~------~~i~~~d~-------~~~~~~~~~~----~--~~v~~i~~~~dg~l~v~~~--------~gl~~ 113 (326)
T 2ghs_A 61 GTAWWFNILE------RELHELHL-------ASGRKTVHAL----P--FMGSALAKISDSKQLIASD--------DGLFL 113 (326)
T ss_dssp TEEEEEEGGG------TEEEEEET-------TTTEEEEEEC----S--SCEEEEEEEETTEEEEEET--------TEEEE
T ss_pred CEEEEEECCC------CEEEEEEC-------CCCcEEEEEC----C--CcceEEEEeCCCeEEEEEC--------CCEEE
Confidence 4566664321 35778887 4444443331 1 1223333344457777531 24899
Q ss_pred EeccCCCCCcCeEEcccCC--CCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEe
Q 021952 105 LELSENFCFGSWQQLVTHP--SPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 172 (305)
Q Consensus 105 ~d~~~~~~~~~W~~~~~~~--~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~ 172 (305)
+|++++ +...+.... .+..+ -..++...++++|+.............++++| + .+...+
T Consensus 114 ~d~~~g----~~~~~~~~~~~~~~~~-~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~--g~~~~~ 174 (326)
T 2ghs_A 114 RDTATG----VLTLHAELESDLPGNR-SNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--K--GKVTKL 174 (326)
T ss_dssp EETTTC----CEEEEECSSTTCTTEE-EEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--T--TEEEEE
T ss_pred EECCCC----cEEEEeeCCCCCCCCC-CCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--C--CcEEEe
Confidence 999887 776664111 11111 12333444566766432111112345688998 4 444444
No 111
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=63.60 E-value=97 Score=28.97 Aligned_cols=131 Identities=12% Similarity=0.076 Sum_probs=69.4
Q ss_pred eeEEEECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCC--CCCC---CCceeEEecCCEEEEEecc
Q 021952 18 HTCVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIA--PPAR---GAHAACCIDNRKMVIHAGI 92 (305)
Q Consensus 18 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~--p~~r---~~~~~~~~~~~~lyv~GG~ 92 (305)
.+-++.+++||+... ...++.+|.. .-+..|+.-...... +..+ ...+.++.+ ++||+...
T Consensus 64 ~~P~v~~g~vyv~~~-------~~~v~AlD~~-----tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~v~v~~~- 129 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGP-------FSVVYALDAR-----DGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWK-GKVYVGVL- 129 (689)
T ss_dssp CCCEEETTEEEEECG-------GGCEEEEETT-----TCCEEEEECCCCCGGGGGGCTTCSCCCCCEEET-TEEEEECT-
T ss_pred ecCEEECCEEEEEcC-------CCeEEEEECC-----CCceeEEEcCCCCccccccccccCCCCccEEEC-CEEEEEcc-
Confidence 445677999998653 2357888871 135568853211100 0000 011223334 47777432
Q ss_pred CCCCCccCcEEEEeccCCCCCcCeEEccc-CCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEE
Q 021952 93 GLYGLRLGDTWVLELSENFCFGSWQQLVT-HPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQ 171 (305)
Q Consensus 93 ~~~~~~~~~~~~~d~~~~~~~~~W~~~~~-~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~ 171 (305)
-..++.+|.+|. ...|+.-.. ..........+.++. ++.+|+-.+. .....-..++.||.+++...|+.
T Consensus 130 ------dg~l~AlDa~TG--~~~W~~~~~~~~~~~~~~~~sP~v~-~g~v~vg~~~-~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 130 ------DGRLEAIDAKTG--QRAWSVDTRADHKRSYTITGAPRVV-NGKVVIGNGG-AEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp ------TSEEEEEETTTC--CEEEEEECCSCTTSCCBCCSCCEEE-TTEEEECCBC-TTTCCBCEEEEEETTTCCEEEEE
T ss_pred ------CCEEEEEECCCC--CEeeeecCcCCCCCCccccCCcEEE-CCEEEEEeCC-CccCCCCEEEEEECCCCcEEEEe
Confidence 135899999875 345876541 111111222334445 5677663322 12123346999999997788986
Q ss_pred e
Q 021952 172 I 172 (305)
Q Consensus 172 ~ 172 (305)
-
T Consensus 200 ~ 200 (689)
T 1yiq_A 200 Y 200 (689)
T ss_dssp E
T ss_pred c
Confidence 5
No 112
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=62.18 E-value=1e+02 Score=28.65 Aligned_cols=123 Identities=7% Similarity=-0.102 Sum_probs=60.7
Q ss_pred eEEecCCEEEEEeccCCCC-------CccCcEEEEeccCCCCCcCe--EEcccCCCCCccCCCeeEEEeCCEEEEEcccC
Q 021952 78 ACCIDNRKMVIHAGIGLYG-------LRLGDTWVLELSENFCFGSW--QQLVTHPSPPARSGHSLTRIGGNRTVLFGGRG 148 (305)
Q Consensus 78 ~~~~~~~~lyv~GG~~~~~-------~~~~~~~~~d~~~~~~~~~W--~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~ 148 (305)
.+...+++.++++.....+ .....++++++.++ +- ..+.. ....+..........+++.+++....
T Consensus 173 ~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~----~~~~~lv~~-~~~~~~~~~~~~~SpDG~~l~~~~~~ 247 (695)
T 2bkl_A 173 PKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTE----PSKDTVVHE-RTGDPTTFLQSDLSRDGKYLFVYILR 247 (695)
T ss_dssp CEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSC----GGGCEEEEC-CCCCTTCEEEEEECTTSCCEEEEEEE
T ss_pred eEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCC----chhceEEEe-cCCCCEEEEEEEECCCCCEEEEEEeC
Confidence 3333444566665542211 13456999999886 42 12221 11112222334444455555554432
Q ss_pred CCCcccceeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 149 VGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 149 ~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
.. ..+++|.+|..+ ..+..+. ..... . ...+. .++.+|+....+. ....|+++|+.+
T Consensus 248 ~~--~~~~l~~~~~~~--~~~~~l~--------~~~~~-~-~~~~~-~~g~l~~~s~~~~---~~~~l~~~d~~~ 304 (695)
T 2bkl_A 248 GW--SENDVYWKRPGE--KDFRLLV--------KGVGA-K-YEVHA-WKDRFYVLTDEGA---PRQRVFEVDPAK 304 (695)
T ss_dssp TT--TEEEEEEECTTC--SSCEEEE--------ECSSC-C-EEEEE-ETTEEEEEECTTC---TTCEEEEEBTTB
T ss_pred CC--CceEEEEEcCCC--CceEEee--------cCCCc-e-EEEEe-cCCcEEEEECCCC---CCCEEEEEeCCC
Confidence 11 356788888777 7788874 11111 1 11222 4555666654321 245689999873
No 113
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=62.01 E-value=69 Score=26.69 Aligned_cols=105 Identities=10% Similarity=0.038 Sum_probs=55.5
Q ss_pred CEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEcc
Q 021952 84 RKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVY 163 (305)
Q Consensus 84 ~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~ 163 (305)
+.+++.|+. + ..+.++|+.++ ....+.... .....-.+++...++.+++.|+.+ ..+..+|+.
T Consensus 131 ~~~l~s~~~--d----~~i~iwd~~~~----~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d~~ 193 (383)
T 3ei3_B 131 TNQLFVSSI--R----GATTLRDFSGS----VIQVFAKTD-SWDYWYCCVDVSVSRQMLATGDST------GRLLLLGLD 193 (383)
T ss_dssp EEEEEEEET--T----TEEEEEETTSC----EEEEEECCC-CSSCCEEEEEEETTTTEEEEEETT------SEEEEEETT
T ss_pred CCEEEEEeC--C----CEEEEEECCCC----ceEEEeccC-CCCCCeEEEEECCCCCEEEEECCC------CCEEEEECC
Confidence 366666664 2 34788888875 555554111 111112234444456677777654 358889986
Q ss_pred ccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCE-EEEEeccCCCCCccCcEEEEecCC
Q 021952 164 EGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGR-VLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 164 ~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~-l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
. ..-..+. ... ... .+.....++. +++.|+.+. .+.++|+.+
T Consensus 194 ~--~~~~~~~--------~h~-~~v-~~~~~~~~~~~~l~s~~~d~------~i~iwd~~~ 236 (383)
T 3ei3_B 194 G--HEIFKEK--------LHK-AKV-THAEFNPRCDWLMATSSVDA------TVKLWDLRN 236 (383)
T ss_dssp S--CEEEEEE--------CSS-SCE-EEEEECSSCTTEEEEEETTS------EEEEEEGGG
T ss_pred C--CEEEEec--------cCC-CcE-EEEEECCCCCCEEEEEeCCC------EEEEEeCCC
Confidence 5 4444442 111 111 1222223444 788887654 478888873
No 114
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=61.93 E-value=68 Score=26.65 Aligned_cols=60 Identities=10% Similarity=0.009 Sum_probs=33.6
Q ss_pred cEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEe-CCEEEEEcccCCC----------CcccceeEEEEccccceeE
Q 021952 101 DTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIG-GNRTVLFGGRGVG----------YEVLNDVWFLDVYEGFFKW 169 (305)
Q Consensus 101 ~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~-~~~i~v~GG~~~~----------~~~~~~~~~~d~~~~~~~W 169 (305)
.++++|+.++ +...+. ..+. +...... +++++++.+.... ......++.+|+.+ ...
T Consensus 265 ~l~~~d~~~g----~~~~l~--~~~~----~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~--~~~ 332 (396)
T 3c5m_A 265 VIYKANPETL----ENEEVM--VMPP----CSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA--KSA 332 (396)
T ss_dssp EEEEECTTTC----CEEEEE--ECCS----EEEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTT--TBC
T ss_pred eEEEEECCCC----CeEEee--eCCC----CCCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEeccc--Cce
Confidence 4999999886 666654 2221 1133443 5566665442100 11235799999988 555
Q ss_pred EEe
Q 021952 170 VQI 172 (305)
Q Consensus 170 ~~~ 172 (305)
..+
T Consensus 333 ~~l 335 (396)
T 3c5m_A 333 QKL 335 (396)
T ss_dssp CEE
T ss_pred EEc
Confidence 555
No 115
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=61.76 E-value=68 Score=26.54 Aligned_cols=22 Identities=14% Similarity=0.196 Sum_probs=12.6
Q ss_pred eCCEEEEEcccCCCCcccceeEEEEccc
Q 021952 137 GGNRTVLFGGRGVGYEVLNDVWFLDVYE 164 (305)
Q Consensus 137 ~~~~i~v~GG~~~~~~~~~~~~~~d~~~ 164 (305)
.++.+|+..... ..+.+|++..
T Consensus 108 dg~~l~~~~~~~------~~v~~~~~~~ 129 (361)
T 3scy_A 108 NGKNIVTANYSG------GSITVFPIGQ 129 (361)
T ss_dssp CSSEEEEEETTT------TEEEEEEBCT
T ss_pred CCCEEEEEECCC------CEEEEEEeCC
Confidence 445566654321 3577888764
No 116
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=61.01 E-value=65 Score=26.08 Aligned_cols=62 Identities=5% Similarity=-0.149 Sum_probs=36.3
Q ss_pred CCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCE-EEEEcccCCCCcccceeEEEE
Q 021952 83 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNR-TVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 83 ~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~-i~v~GG~~~~~~~~~~~~~~d 161 (305)
.+.+|+.... -+.+.++|+.++ +...... .+. . ...++...+++ +|+.+... ..++++|
T Consensus 9 ~~~~~v~~~~------~~~v~~~d~~~~----~~~~~~~--~~~-~-~~~~~~s~dg~~l~~~~~~~------~~i~~~d 68 (331)
T 3u4y_A 9 SNFGIVVEQH------LRRISFFSTDTL----EILNQIT--LGY-D-FVDTAITSDCSNVVVTSDFC------QTLVQIE 68 (331)
T ss_dssp CCEEEEEEGG------GTEEEEEETTTC----CEEEEEE--CCC-C-EEEEEECSSSCEEEEEESTT------CEEEEEE
T ss_pred CCEEEEEecC------CCeEEEEeCccc----ceeeeEE--ccC-C-cceEEEcCCCCEEEEEeCCC------CeEEEEE
Confidence 3577887654 246899999887 6654431 111 1 11344444454 66655432 3699999
Q ss_pred ccc
Q 021952 162 VYE 164 (305)
Q Consensus 162 ~~~ 164 (305)
+.+
T Consensus 69 ~~~ 71 (331)
T 3u4y_A 69 TQL 71 (331)
T ss_dssp CSS
T ss_pred CCC
Confidence 988
No 117
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=60.87 E-value=1.1e+02 Score=28.67 Aligned_cols=105 Identities=14% Similarity=0.154 Sum_probs=53.7
Q ss_pred cCcEEEEeccCCCCCcCe--EEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEcccccee-EEEeccc
Q 021952 99 LGDTWVLELSENFCFGSW--QQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFK-WVQIPYE 175 (305)
Q Consensus 99 ~~~~~~~d~~~~~~~~~W--~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~-W~~~~~~ 175 (305)
...+++.++.++ +- ..+.. ....+..........+++.+++.... .....++++.+|+.++... |..+.
T Consensus 242 ~~~v~~~~lgt~----~~~~~lv~~-~~~~~~~~~~~~~SpDG~~l~~~~~~-~~~~~~~l~~~d~~~~~~~~~~~l~-- 313 (741)
T 1yr2_A 242 NQTVWLHRLGTP----QSADQPVFA-TPELPKRGHGASVSSDGRWVVITSSE-GTDPVNTVHVARVTNGKIGPVTALI-- 313 (741)
T ss_dssp CCEEEEEETTSC----GGGCEEEEC-CTTCTTCEEEEEECTTSCEEEEEEEC-TTCSCCEEEEEEEETTEECCCEEEE--
T ss_pred CCEEEEEECCCC----chhCEEEec-cCCCCeEEEEEEECCCCCEEEEEEEc-cCCCcceEEEEECCCCCCcccEEec--
Confidence 456888988775 32 12221 11112222334444455544444332 2123568999999872226 88874
Q ss_pred cCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 176 LQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 176 ~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
....... ..+...++.|++....+. ....|+++|+.
T Consensus 314 ------~~~~~~~--~~~~~dg~~l~~~s~~~~---~~~~l~~~d~~ 349 (741)
T 1yr2_A 314 ------PDLKAQW--DFVDGVGDQLWFVSGDGA---PLKKIVRVDLS 349 (741)
T ss_dssp ------CSSSSCE--EEEEEETTEEEEEECTTC---TTCEEEEEECS
T ss_pred ------CCCCceE--EEEeccCCEEEEEECCCC---CCCEEEEEeCC
Confidence 1111111 112236777777765422 24568999987
No 118
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=60.60 E-value=1.1e+02 Score=28.49 Aligned_cols=106 Identities=15% Similarity=0.155 Sum_probs=55.2
Q ss_pred cCcEEEEeccCCCCCcCeE--EcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccc------cceeEE
Q 021952 99 LGDTWVLELSENFCFGSWQ--QLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYE------GFFKWV 170 (305)
Q Consensus 99 ~~~~~~~d~~~~~~~~~W~--~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~------~~~~W~ 170 (305)
...++++++.++ +.+ .+.. ....+..........+++.+++.... .....++++.+|+.+ +...+.
T Consensus 207 ~~~v~~~~l~t~----~~~~~~v~~-~~~~~~~~~~~~~SpDg~~l~~~~~~-~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 207 HQKLYYHVLGTD----QSEDILCAE-FPDEPKWMGGAELSDDGRYVLLSIRE-GCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCEEEEEETTSC----GGGCEEEEC-CTTCTTCEEEEEECTTSCEEEEEEEC-SSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred CCEEEEEECCCC----cccceEEec-cCCCCeEEEEEEEcCCCCEEEEEEEc-cCCCccEEEEEECcccccccCCccceE
Confidence 456899999876 432 2211 11112222334444455555554331 112256899999875 223577
Q ss_pred EeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 171 QIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 171 ~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
.+. ...... ...+...++.||+.+..+. ....|+++|+.+
T Consensus 281 ~l~--------~~~~~~--~~~~s~dg~~l~~~s~~~~---~~~~l~~~d~~~ 320 (710)
T 2xdw_A 281 KLI--------DNFEGE--YDYVTNEGTVFTFKTNRHS---PNYRLINIDFTD 320 (710)
T ss_dssp EEE--------CSSSSC--EEEEEEETTEEEEEECTTC---TTCEEEEEETTS
T ss_pred Eee--------CCCCcE--EEEEeccCCEEEEEECCCC---CCCEEEEEeCCC
Confidence 774 111111 1222335778888875432 245699999874
No 119
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=60.59 E-value=81 Score=27.06 Aligned_cols=107 Identities=10% Similarity=0.027 Sum_probs=54.0
Q ss_pred CEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEE-eCCEEEEEcccCCCCcccceeEEEEc
Q 021952 84 RKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRI-GGNRTVLFGGRGVGYEVLNDVWFLDV 162 (305)
Q Consensus 84 ~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~d~ 162 (305)
..+++.|+.+ ..+.++|+.++ +-..+..... ....-.++... .++.+++.|+.+ ..+..+|+
T Consensus 132 ~~~lasGs~d------g~i~lWd~~~~----~~~~~~~~~g-H~~~V~~l~f~p~~~~~l~s~s~D------~~v~iwd~ 194 (435)
T 4e54_B 132 PSTVAVGSKG------GDIMLWNFGIK----DKPTFIKGIG-AGGSITGLKFNPLNTNQFYASSME------GTTRLQDF 194 (435)
T ss_dssp TTCEEEEETT------SCEEEECSSCC----SCCEEECCCS-SSCCCCEEEECSSCTTEEEEECSS------SCEEEEET
T ss_pred CCEEEEEeCC------CEEEEEECCCC----CceeEEEccC-CCCCEEEEEEeCCCCCEEEEEeCC------CEEEEeec
Confidence 3577777752 24888888775 3322220000 01111223332 234566666654 24778899
Q ss_pred cccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 163 YEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 163 ~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
++ .....+. ...... ....+.....++.+++.|+.++ .|.++|+.
T Consensus 195 ~~--~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~l~~g~~dg------~i~~wd~~ 239 (435)
T 4e54_B 195 KG--NILRVFA-----SSDTIN--IWFCSLDVSASSRMVVTGDNVG------NVILLNMD 239 (435)
T ss_dssp TS--CEEEEEE-----CCSSCS--CCCCCEEEETTTTEEEEECSSS------BEEEEESS
T ss_pred cC--CceeEEe-----ccCCCC--ccEEEEEECCCCCEEEEEeCCC------cEeeeccC
Confidence 87 6555542 011111 1111222224677888887654 37888876
No 120
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=60.59 E-value=82 Score=27.14 Aligned_cols=107 Identities=16% Similarity=0.134 Sum_probs=53.8
Q ss_pred CCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEE-cccCCCC-CccCCCeeEEEeC---CEEEEEcccCCCCccccee
Q 021952 83 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQ-LVTHPSP-PARSGHSLTRIGG---NRTVLFGGRGVGYEVLNDV 157 (305)
Q Consensus 83 ~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~-~~~~~~p-~~r~~~~~~~~~~---~~i~v~GG~~~~~~~~~~~ 157 (305)
+++.++.|+. ...++.+++.+. +... ... ... ....-.+++...+ +.+++.|+.+ ..+
T Consensus 160 ~~~~l~~~~~------~g~v~~~~~~~~----~~~~~~~~-~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d------~~i 222 (450)
T 2vdu_B 160 DDTTVIIADK------FGDVYSIDINSI----PEEKFTQE-PILGHVSMLTDVHLIKDSDGHQFIITSDRD------EHI 222 (450)
T ss_dssp TSSEEEEEET------TSEEEEEETTSC----CCSSCCCC-CSEECSSCEEEEEEEECTTSCEEEEEEETT------SCE
T ss_pred CCCEEEEEeC------CCcEEEEecCCc----ccccccce-eeecccCceEEEEEcCCCCCCcEEEEEcCC------CcE
Confidence 4456666653 234788888765 3221 000 000 0111123444555 6788888764 358
Q ss_pred EEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 158 WFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 158 ~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
.++|+.+ ....... .... .... .+++.. ++.+++.|+.+. .|.++|+.+
T Consensus 223 ~vwd~~~--~~~~~~~------~~~h-~~~v-~~~~~s-d~~~l~s~~~d~------~v~vwd~~~ 271 (450)
T 2vdu_B 223 KISHYPQ--CFIVDKW------LFGH-KHFV-SSICCG-KDYLLLSAGGDD------KIFAWDWKT 271 (450)
T ss_dssp EEEEESC--TTCEEEE------CCCC-SSCE-EEEEEC-STTEEEEEESSS------EEEEEETTT
T ss_pred EEEECCC--Cceeeee------ecCC-CCce-EEEEEC-CCCEEEEEeCCC------eEEEEECCC
Confidence 8888877 4322210 0011 1111 222232 677777887543 488888874
No 121
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=60.45 E-value=59 Score=25.41 Aligned_cols=110 Identities=12% Similarity=0.030 Sum_probs=56.6
Q ss_pred ceeEEecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccc
Q 021952 76 HAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLN 155 (305)
Q Consensus 76 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~ 155 (305)
+.++...++.+|+... ...+++||++++ ....+..... ..-+.++...++.+|+.... ..
T Consensus 70 ~~i~~~~~g~l~v~~~-------~~~i~~~d~~~~----~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~~------~~ 129 (270)
T 1rwi_B 70 QGLAVDGAGTVYVTDF-------NNRVVTLAAGSN----NQTVLPFDGL---NYPEGLAVDTQGAVYVADRG------NN 129 (270)
T ss_dssp CCEEECTTCCEEEEET-------TTEEEEECTTCS----CCEECCCCSC---SSEEEEEECTTCCEEEEEGG------GT
T ss_pred ceeEECCCCCEEEEcC-------CCEEEEEeCCCc----eEeeeecCCc---CCCcceEECCCCCEEEEECC------CC
Confidence 3444444457888654 135899998875 4333331111 11233444445678876532 13
Q ss_pred eeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 156 DVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 156 ~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
.+++++..+ ....... ......+ ...+...++.+|+..... +.+.+||..
T Consensus 130 ~i~~~~~~~--~~~~~~~------~~~~~~p---~~i~~~~~g~l~v~~~~~------~~i~~~~~~ 179 (270)
T 1rwi_B 130 RVVKLAAGS--KTQTVLP------FTGLNDP---DGVAVDNSGNVYVTDTDN------NRVVKLEAE 179 (270)
T ss_dssp EEEEECTTC--CSCEECC------CCSCCSC---CCEEECTTCCEEEEEGGG------TEEEEECTT
T ss_pred EEEEEECCC--ceeEeec------cccCCCc---eeEEEeCCCCEEEEECCC------CEEEEEecC
Confidence 588887765 4433321 1111122 223332456788876432 348888876
No 122
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=60.43 E-value=73 Score=26.51 Aligned_cols=106 Identities=9% Similarity=0.042 Sum_probs=56.5
Q ss_pred EEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEe-CCEEEEEcccCCCCcccceeEEEEcc
Q 021952 85 KMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIG-GNRTVLFGGRGVGYEVLNDVWFLDVY 163 (305)
Q Consensus 85 ~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~d~~ 163 (305)
.+++.|+.+ ..+.++|+.+. +........ .....-.++.... ++.+++.|+.+ ..+..+|+.
T Consensus 87 ~~l~s~~~d------g~i~iwd~~~~----~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~ 149 (383)
T 3ei3_B 87 TTVAVGSKG------GDIILWDYDVQ----NKTSFIQGM-GPGDAITGMKFNQFNTNQLFVSSIR------GATTLRDFS 149 (383)
T ss_dssp TEEEEEEBT------SCEEEEETTST----TCEEEECCC-STTCBEEEEEEETTEEEEEEEEETT------TEEEEEETT
T ss_pred CEEEEEcCC------CeEEEEeCCCc----ccceeeecC-CcCCceeEEEeCCCCCCEEEEEeCC------CEEEEEECC
Confidence 577777652 34889999876 554443100 0111112233332 24667777653 358889998
Q ss_pred ccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 164 EGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 164 ~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
+ .....+. ..........+.....++.+++.|+.+. .+.++|+.
T Consensus 150 ~--~~~~~~~-------~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~i~d~~ 193 (383)
T 3ei3_B 150 G--SVIQVFA-------KTDSWDYWYCCVDVSVSRQMLATGDSTG------RLLLLGLD 193 (383)
T ss_dssp S--CEEEEEE-------CCCCSSCCEEEEEEETTTTEEEEEETTS------EEEEEETT
T ss_pred C--CceEEEe-------ccCCCCCCeEEEEECCCCCEEEEECCCC------CEEEEECC
Confidence 7 7666663 1111111112222224567777777653 48888875
No 123
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=60.30 E-value=62 Score=25.60 Aligned_cols=110 Identities=7% Similarity=-0.150 Sum_probs=56.1
Q ss_pred ceeEEecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccc
Q 021952 76 HAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLN 155 (305)
Q Consensus 76 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~ 155 (305)
+.++...++.+|+.... ...++++|+ ++ +...... .......+.++...++.+|+.... ..
T Consensus 102 ~~i~~~~~g~l~v~~~~------~~~i~~~d~-~g----~~~~~~~--~~~~~~~~~i~~~~~g~l~v~~~~------~~ 162 (299)
T 2z2n_A 102 YGITEGPNGDIWFTEMN------GNRIGRITD-DG----KIREYEL--PNKGSYPSFITLGSDNALWFTENQ------NN 162 (299)
T ss_dssp EEEEECTTSCEEEEETT------TTEEEEECT-TC----CEEEEEC--SSTTCCEEEEEECTTSCEEEEETT------TT
T ss_pred eeeEECCCCCEEEEecC------CceEEEECC-CC----CEEEecC--CCCCCCCceEEEcCCCCEEEEeCC------CC
Confidence 34444445578886432 235888998 44 5554431 101122234444445678875422 13
Q ss_pred eeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEec
Q 021952 156 DVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDT 221 (305)
Q Consensus 156 ~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~ 221 (305)
.++++|+ + ++...+. ..... . .-...+...++.+|+.... .+.+.++|+
T Consensus 163 ~i~~~~~-~--g~~~~~~-----~~~~~--~-~~~~i~~~~~g~l~v~~~~------~~~i~~~~~ 211 (299)
T 2z2n_A 163 AIGRITE-S--GDITEFK-----IPTPA--S-GPVGITKGNDDALWFVEII------GNKIGRITT 211 (299)
T ss_dssp EEEEECT-T--CCEEEEE-----CSSTT--C-CEEEEEECTTSSEEEEETT------TTEEEEECT
T ss_pred EEEEEcC-C--CcEEEee-----CCCCC--C-cceeEEECCCCCEEEEccC------CceEEEECC
Confidence 5899998 6 6665542 00111 1 1122333245678876532 234788887
No 124
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=59.94 E-value=1e+02 Score=28.08 Aligned_cols=114 Identities=11% Similarity=0.025 Sum_probs=60.4
Q ss_pred CCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCC--CccC---CCeeEEEeCCEEEEEcccCCCCccccee
Q 021952 83 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSP--PARS---GHSLTRIGGNRTVLFGGRGVGYEVLNDV 157 (305)
Q Consensus 83 ~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p--~~r~---~~~~~~~~~~~i~v~GG~~~~~~~~~~~ 157 (305)
++++|+.+..+ + ...+|++|++++ ++..+...... .+.. ....+...++++++.+.. ....+
T Consensus 252 dg~l~~~~~~~--~--~~~l~~~~~~~~----~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-----~~~~l 318 (662)
T 3azo_A 252 DGSLIVATDRT--G--WWNLHRVDPATG----AATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-----GAAVL 318 (662)
T ss_dssp TSCEEEEECTT--S--SCEEEEECTTTC----CEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-----SSCEE
T ss_pred CCeEEEEECCC--C--CeEEEEEECCCC----ceeecccccccccCccccccCceEeEeCCCEEEEEEEc-----CccEE
Confidence 44677666542 2 246999998877 88777521110 0111 112333335666666543 23569
Q ss_pred EEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCC
Q 021952 158 WFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 224 (305)
Q Consensus 158 ~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~ 224 (305)
|.+|+.+ ...+.+. .+.... .......++.+++..+... ...++|.+|+.+.
T Consensus 319 ~~~d~~~--~~~~~l~---------~~~~~~-~~~~s~~~~~~~~~~~~~~---~~~~i~~~d~~~g 370 (662)
T 3azo_A 319 GILDPES--GELVDAA---------GPWTEW-AATLTVSGTRAVGVAASPR---TAYEVVELDTVTG 370 (662)
T ss_dssp EEEETTT--TEEEECC---------SSCCEE-EEEEEEETTEEEEEEEETT---EEEEEEEEETTTC
T ss_pred EEEECCC--CcEEEec---------CCCCeE-EEEEecCCCEEEEEEcCCC---CCCEEEEEECCCC
Confidence 9999987 6677763 111111 1220235666655544321 2346888887644
No 125
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=58.79 E-value=63 Score=25.22 Aligned_cols=104 Identities=8% Similarity=-0.033 Sum_probs=50.6
Q ss_pred cceeeccccccccccc-ceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcc
Q 021952 42 DTWIGQIACHENLGIT-LSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLV 120 (305)
Q Consensus 42 ~~~~~~~~~~~~~~~~-~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~ 120 (305)
.++++|+ .+ .+...+... +.......+....+++.+++++.... ....+|.++..+. +-..+.
T Consensus 63 ~i~~~d~-------~~~~~~~~~~~~---~~~~~~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~----~~~~~~ 126 (297)
T 2ojh_A 63 LLYRLSL-------AGDPSPEKVDTG---FATICNNDHGISPDGALYAISDKVEF--GKSAIYLLPSTGG----TPRLMT 126 (297)
T ss_dssp EEEEEES-------SSCCSCEECCCT---TCCCBCSCCEECTTSSEEEEEECTTT--SSCEEEEEETTCC----CCEECC
T ss_pred eEEEEeC-------CCCCCceEeccc---cccccccceEECCCCCEEEEEEeCCC--CcceEEEEECCCC----ceEEee
Confidence 5788888 44 444443311 11111222333333355565553222 3467889988776 555544
Q ss_pred cCCCCCccCCCeeEEEeCCE-EEEEcccCCCCcccceeEEEEccccceeEEEe
Q 021952 121 THPSPPARSGHSLTRIGGNR-TVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 172 (305)
Q Consensus 121 ~~~~p~~r~~~~~~~~~~~~-i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~ 172 (305)
. .. . ...+....+++ +++.++.. . ...+|.+|+.+ .....+
T Consensus 127 ~--~~-~--~~~~~~spdg~~l~~~~~~~-~---~~~l~~~~~~~--~~~~~~ 168 (297)
T 2ojh_A 127 K--NL-P--SYWHGWSPDGKSFTYCGIRD-Q---VFDIYSMDIDS--GVETRL 168 (297)
T ss_dssp S--SS-S--EEEEEECTTSSEEEEEEEET-T---EEEEEEEETTT--CCEEEC
T ss_pred c--CC-C--ccceEECCCCCEEEEEECCC-C---ceEEEEEECCC--CcceEc
Confidence 1 11 1 22233333444 44444432 1 23688888877 666665
No 126
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=58.24 E-value=72 Score=25.74 Aligned_cols=61 Identities=13% Similarity=0.118 Sum_probs=32.5
Q ss_pred EEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccc
Q 021952 85 KMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYE 164 (305)
Q Consensus 85 ~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~ 164 (305)
.+++.|+.+ ..+.++|+.+. +......+ .. ..-.+++...++.+++.|+.+ ..+..+|+.+
T Consensus 186 ~~~~s~~~d------~~i~i~d~~~~----~~~~~~~~--h~-~~v~~~~~s~~~~~l~s~s~D------g~i~iwd~~~ 246 (340)
T 4aow_A 186 PIIVSCGWD------KLVKVWNLANC----KLKTNHIG--HT-GYLNTVTVSPDGSLCASGGKD------GQAMLWDLNE 246 (340)
T ss_dssp CEEEEEETT------SCEEEEETTTT----EEEEEECC--CS-SCEEEEEECTTSSEEEEEETT------CEEEEEETTT
T ss_pred cEEEEEcCC------CEEEEEECCCC----ceeeEecC--CC-CcEEEEEECCCCCEEEEEeCC------CeEEEEEecc
Confidence 455666542 24788888875 33222211 11 111223334456677777764 2478889887
No 127
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=57.33 E-value=28 Score=29.08 Aligned_cols=66 Identities=11% Similarity=0.042 Sum_probs=35.9
Q ss_pred EEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEE-eCCEEEEEeccCCCCCcc
Q 021952 135 RIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLI-LGGRVLIYGGEDSARRRK 213 (305)
Q Consensus 135 ~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~ 213 (305)
...++.+++.|+.+ ..+..+|+.+ ..|..+. .+......-.++.. .++.+++.|+.+.
T Consensus 19 ~s~~g~~l~~~~~d------~~i~iw~~~~--~~~~~~~--------~~~~h~~~v~~~~~s~~~~~l~s~s~d~----- 77 (377)
T 3dwl_C 19 FNSQRTEFVTTTAT------NQVELYEQDG--NGWKHAR--------TFSDHDKIVTCVDWAPKSNRIVTCSQDR----- 77 (377)
T ss_dssp ECSSSSEEECCCSS------SCBCEEEEET--TEEEECC--------CBCCCSSCEEEEEECTTTCCEEEEETTS-----
T ss_pred ECCCCCEEEEecCC------CEEEEEEccC--CceEEEE--------EEecCCceEEEEEEeCCCCEEEEEeCCC-----
Confidence 33356677777653 2477888888 7777663 23222222222222 3567778887654
Q ss_pred CcEEEEecC
Q 021952 214 DDFWVLDTK 222 (305)
Q Consensus 214 ~~~~~~d~~ 222 (305)
.+.++|+.
T Consensus 78 -~v~vwd~~ 85 (377)
T 3dwl_C 78 -NAYVYEKR 85 (377)
T ss_dssp -SEEEC---
T ss_pred -eEEEEEcC
Confidence 37788877
No 128
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=57.06 E-value=76 Score=25.60 Aligned_cols=109 Identities=11% Similarity=-0.070 Sum_probs=53.6
Q ss_pred CCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCCccCcEE
Q 021952 24 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTW 103 (305)
Q Consensus 24 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 103 (305)
++.||+..-. ...++++|+ .+......... ..-.+.+...++++++..+ +.++
T Consensus 24 ~~~l~~~d~~------~~~i~~~d~-------~~~~~~~~~~~------~~~~~i~~~~dG~l~v~~~--------~~l~ 76 (297)
T 3g4e_A 24 SNSLLFVDIP------AKKVCRWDS-------FTKQVQRVTMD------APVSSVALRQSGGYVATIG--------TKFC 76 (297)
T ss_dssp TTEEEEEETT------TTEEEEEET-------TTCCEEEEECS------SCEEEEEEBTTSSEEEEET--------TEEE
T ss_pred CCEEEEEECC------CCEEEEEEC-------CCCcEEEEeCC------CceEEEEECCCCCEEEEEC--------CeEE
Confidence 3567776432 235788888 44443333211 1122333344446666421 3589
Q ss_pred EEeccCCCCCcCeEEcccCC--CCCccCCCeeEEEeCCEEEEEcccCCC-----CcccceeEEEEccc
Q 021952 104 VLELSENFCFGSWQQLVTHP--SPPARSGHSLTRIGGNRTVLFGGRGVG-----YEVLNDVWFLDVYE 164 (305)
Q Consensus 104 ~~d~~~~~~~~~W~~~~~~~--~p~~r~~~~~~~~~~~~i~v~GG~~~~-----~~~~~~~~~~d~~~ 164 (305)
+||++++ +++.+.... .+..+. ..+++..++++|+..-.... ......++++|...
T Consensus 77 ~~d~~~g----~~~~~~~~~~~~~~~~~-~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 77 ALNWKEQ----SAVVLATVDNDKKNNRF-NDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp EEETTTT----EEEEEEECCTTCSSEEE-EEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred EEECCCC----cEEEEEecCCCCCCCCC-CCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 9999887 777665111 121122 22334445677663211100 11234688888753
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=56.55 E-value=95 Score=26.60 Aligned_cols=111 Identities=8% Similarity=0.094 Sum_probs=57.2
Q ss_pred CCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCE-EEEEcccCCCCcccceeEEEE
Q 021952 83 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNR-TVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 83 ~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~-i~v~GG~~~~~~~~~~~~~~d 161 (305)
+++.+++++... ....++++|+.++ +...+. ..+ ....+.+...+++ +++.+... . ...++.+|
T Consensus 189 dg~~la~~s~~~---~~~~i~~~d~~tg----~~~~l~--~~~--~~~~~~~~spdg~~la~~~~~~-g---~~~i~~~d 253 (415)
T 2hqs_A 189 DGSKLAYVTFES---GRSALVIQTLANG----AVRQVA--SFP--RHNGAPAFSPDGSKLAFALSKT-G---SLNLYVMD 253 (415)
T ss_dssp TSSEEEEEECTT---SSCEEEEEETTTC----CEEEEE--CCS--SCEEEEEECTTSSEEEEEECTT-S---SCEEEEEE
T ss_pred CCCEEEEEEecC---CCcEEEEEECCCC----cEEEee--cCC--CcccCEEEcCCCCEEEEEEecC-C---CceEEEEE
Confidence 335556655421 1257999999987 666554 211 1122333433454 44344322 1 24699999
Q ss_pred ccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 162 VYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 162 ~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
+.+ .+...+. ..+ ..... ....-+++.++++..... ...+|++|+.+
T Consensus 254 ~~~--~~~~~l~--------~~~-~~~~~-~~~spdg~~l~~~s~~~g---~~~i~~~d~~~ 300 (415)
T 2hqs_A 254 LAS--GQIRQVT--------DGR-SNNTE-PTWFPDSQNLAFTSDQAG---RPQVYKVNING 300 (415)
T ss_dssp TTT--CCEEECC--------CCS-SCEEE-EEECTTSSEEEEEECTTS---SCEEEEEETTS
T ss_pred CCC--CCEEeCc--------CCC-Ccccc-eEECCCCCEEEEEECCCC---CcEEEEEECCC
Confidence 998 7766663 111 11111 222235555555543211 34699999873
No 130
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=54.86 E-value=77 Score=25.02 Aligned_cols=110 Identities=10% Similarity=-0.110 Sum_probs=54.8
Q ss_pred ceeEEecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccc
Q 021952 76 HAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLN 155 (305)
Q Consensus 76 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~ 155 (305)
+.++...++.+|+.... ...++++|++ + +........ .....+.++...++++|+.... ..
T Consensus 107 ~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g----~~~~~~~~~--~~~~~~~i~~d~~g~l~v~~~~------~~ 167 (300)
T 2qc5_A 107 YGITEGLNGDIWFTQLN------GDRIGKLTAD-G----TIYEYDLPN--KGSYPAFITLGSDNALWFTENQ------NN 167 (300)
T ss_dssp EEEEECSTTCEEEEETT------TTEEEEECTT-S----CEEEEECSS--TTCCEEEEEECTTSSEEEEETT------TT
T ss_pred ccceECCCCCEEEEccC------CCeEEEECCC-C----CEEEccCCC--CCCCceeEEECCCCCEEEEecC------CC
Confidence 34444445578876432 2358889887 4 555443100 1112233444445667776432 13
Q ss_pred eeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEec
Q 021952 156 DVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDT 221 (305)
Q Consensus 156 ~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~ 221 (305)
.+++||. + .+...+. ...... .-...+...++.+|+.... .+.+++||+
T Consensus 168 ~i~~~~~-~--g~~~~~~-----~~~~~~---~~~~i~~d~~g~l~v~~~~------~~~i~~~~~ 216 (300)
T 2qc5_A 168 SIGRITN-T--GKLEEYP-----LPTNAA---APVGITSGNDGALWFVEIM------GNKIGRITT 216 (300)
T ss_dssp EEEEECT-T--CCEEEEE-----CSSTTC---CEEEEEECTTSSEEEEETT------TTEEEEECT
T ss_pred eEEEECC-C--CcEEEee-----CCCCCC---CcceEEECCCCCEEEEccC------CCEEEEEcC
Confidence 5889998 5 5555542 001111 1122323235678876532 224788887
No 131
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=54.41 E-value=78 Score=24.96 Aligned_cols=111 Identities=8% Similarity=-0.062 Sum_probs=56.6
Q ss_pred ceeEEecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccc
Q 021952 76 HAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLN 155 (305)
Q Consensus 76 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~ 155 (305)
+.++...++.+|+.... ...++++|+ ++ +...+.... . ...-..++...++.+|+.... .+
T Consensus 144 ~~i~~~~~g~l~v~~~~------~~~i~~~~~-~g----~~~~~~~~~-~-~~~~~~i~~~~~g~l~v~~~~------~~ 204 (299)
T 2z2n_A 144 SFITLGSDNALWFTENQ------NNAIGRITE-SG----DITEFKIPT-P-ASGPVGITKGNDDALWFVEII------GN 204 (299)
T ss_dssp EEEEECTTSCEEEEETT------TTEEEEECT-TC----CEEEEECSS-T-TCCEEEEEECTTSSEEEEETT------TT
T ss_pred ceEEEcCCCCEEEEeCC------CCEEEEEcC-CC----cEEEeeCCC-C-CCcceeEEECCCCCEEEEccC------Cc
Confidence 34444445578875421 245899998 55 665543101 0 111123444445677776432 23
Q ss_pred eeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 156 DVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 156 ~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
.+.+||+ + .+..... ....... -...+...++.+|+.... .+.+.+||+.
T Consensus 205 ~i~~~~~-~--g~~~~~~-------~~~~~~~-~~~i~~~~~g~l~v~~~~------~~~i~~~d~~ 254 (299)
T 2z2n_A 205 KIGRITT-S--GEITEFK-------IPTPNAR-PHAITAGAGIDLWFTEWG------ANKIGRLTSN 254 (299)
T ss_dssp EEEEECT-T--CCEEEEE-------CSSTTCC-EEEEEECSTTCEEEEETT------TTEEEEEETT
T ss_pred eEEEECC-C--CcEEEEE-------CCCCCCC-ceeEEECCCCCEEEeccC------CceEEEECCC
Confidence 5899999 6 5665542 0111111 122333245678876522 2348889874
No 132
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=53.87 E-value=86 Score=25.26 Aligned_cols=144 Identities=8% Similarity=-0.096 Sum_probs=65.6
Q ss_pred cceeecccccccccccceEEecccCCC-CCCCCCCceeEEecCCEEEEEeccCCC------CCccCcEEEEeccCCCCCc
Q 021952 42 DTWIGQIACHENLGITLSWRLLDVGSI-APPARGAHAACCIDNRKMVIHAGIGLY------GLRLGDTWVLELSENFCFG 114 (305)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~W~~~~~~~~-~p~~r~~~~~~~~~~~~lyv~GG~~~~------~~~~~~~~~~d~~~~~~~~ 114 (305)
.++++|+ .+.+++.+..... .+..+ ....+...++++|+.. .... ......+|++|.+.
T Consensus 74 ~l~~~d~-------~~g~~~~~~~~~~~~~~~~-~~di~~d~dG~l~~~~-~~~~~~~~~~~~~~~~l~~~d~~g----- 139 (297)
T 3g4e_A 74 KFCALNW-------KEQSAVVLATVDNDKKNNR-FNDGKVDPAGRYFAGT-MAEETAPAVLERHQGALYSLFPDH----- 139 (297)
T ss_dssp EEEEEET-------TTTEEEEEEECCTTCSSEE-EEEEEECTTSCEEEEE-EECCSBTTBCCTTCEEEEEECTTS-----
T ss_pred eEEEEEC-------CCCcEEEEEecCCCCCCCC-CCCEEECCCCCEEEec-CCcccccccccCCCcEEEEEECCC-----
Confidence 5777887 5666766553221 11112 2223333445777632 2111 11235688888754
Q ss_pred CeEEcccCCCCCccCCCeeEEEeCC-EEEEEcccCCCCcccceeEEEEc--cccceeEEEeccccCCCCCCCCC-Cccee
Q 021952 115 SWQQLVTHPSPPARSGHSLTRIGGN-RTVLFGGRGVGYEVLNDVWFLDV--YEGFFKWVQIPYELQNIPAGFSL-PRVGH 190 (305)
Q Consensus 115 ~W~~~~~~~~p~~r~~~~~~~~~~~-~i~v~GG~~~~~~~~~~~~~~d~--~~~~~~W~~~~~~~~~~~~~~p~-~r~~~ 190 (305)
+...+.. .. .....++...++ .+|+.... .+.+++||+ .+ +....... ...++. ...-.
T Consensus 140 ~~~~~~~-~~---~~pngi~~spdg~~lyv~~~~------~~~i~~~~~d~~~--G~~~~~~~-----~~~~~~~~~~p~ 202 (297)
T 3g4e_A 140 HVKKYFD-QV---DISNGLDWSLDHKIFYYIDSL------SYSVDAFDYDLQT--GQISNRRS-----VYKLEKEEQIPD 202 (297)
T ss_dssp CEEEEEE-EE---SBEEEEEECTTSCEEEEEEGG------GTEEEEEEECTTT--CCEEEEEE-----EEECCGGGCEEE
T ss_pred CEEEEee-cc---ccccceEEcCCCCEEEEecCC------CCcEEEEeccCCC--CcccCcEE-----EEECCCCCCCCC
Confidence 3333321 10 111233343334 57776533 246888887 34 33321100 001111 01112
Q ss_pred EEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 191 SATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 191 ~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
.+++..++.||+..... ..|.+||+.
T Consensus 203 g~~~d~~G~lwva~~~~------~~v~~~d~~ 228 (297)
T 3g4e_A 203 GMCIDAEGKLWVACYNG------GRVIRLDPV 228 (297)
T ss_dssp EEEEBTTSCEEEEEETT------TEEEEECTT
T ss_pred eeEECCCCCEEEEEcCC------CEEEEEcCC
Confidence 23333567888875321 248999987
No 133
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=53.04 E-value=1e+02 Score=25.88 Aligned_cols=64 Identities=9% Similarity=0.092 Sum_probs=33.7
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
.++.+++.|+.+ ..+.++|+.+.. .-..+. .. ...-.+++...++..++.|+.+ ..+..+|
T Consensus 149 ~~~~~l~s~s~d------~~i~iwd~~~~~---~~~~~~--~h--~~~v~~~~~~~~~~~l~s~~~d------~~v~iwd 209 (420)
T 3vl1_A 149 PSGEALISSSQD------MQLKIWSVKDGS---NPRTLI--GH--RATVTDIAIIDRGRNVLSASLD------GTIRLWE 209 (420)
T ss_dssp TTSSEEEEEETT------SEEEEEETTTCC---CCEEEE--CC--SSCEEEEEEETTTTEEEEEETT------SCEEEEE
T ss_pred CCCCEEEEEeCC------CeEEEEeCCCCc---CceEEc--CC--CCcEEEEEEcCCCCEEEEEcCC------CcEEEeE
Confidence 344666777642 348889988751 111221 10 1111233344455666677654 2488889
Q ss_pred ccc
Q 021952 162 VYE 164 (305)
Q Consensus 162 ~~~ 164 (305)
+.+
T Consensus 210 ~~~ 212 (420)
T 3vl1_A 210 CGT 212 (420)
T ss_dssp TTT
T ss_pred CCC
Confidence 887
No 134
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=51.02 E-value=1.6e+02 Score=27.50 Aligned_cols=104 Identities=13% Similarity=0.123 Sum_probs=51.9
Q ss_pred CCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeE-EcccCCCCCccCCCeeEEEe--CCEEEEEcccCCCCcccceeEE
Q 021952 83 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQ-QLVTHPSPPARSGHSLTRIG--GNRTVLFGGRGVGYEVLNDVWF 159 (305)
Q Consensus 83 ~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~-~~~~~~~p~~r~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~ 159 (305)
++.+++.|+.+ ..+.++|+.+. +-. .+.. .. ...-.++.... ++..++.|+.+ ..+..
T Consensus 152 ~~~~l~~~~~d------g~v~vwd~~~~----~~~~~~~~-~~--~~~v~~~~~~~~~~~~~l~~~~~d------g~i~~ 212 (814)
T 3mkq_A 152 DPSTFASGCLD------RTVKVWSLGQS----TPNFTLTT-GQ--ERGVNYVDYYPLPDKPYMITASDD------LTIKI 212 (814)
T ss_dssp EEEEEEEEETT------SEEEEEETTCS----SCSEEEEC-CC--TTCCCEEEECCSTTCCEEEEECTT------SEEEE
T ss_pred CCCEEEEEeCC------CeEEEEECCCC----cceeEEec-CC--CCCEEEEEEEECCCCCEEEEEeCC------CEEEE
Confidence 34677777642 34888888764 211 1111 11 11122233332 45677777653 25888
Q ss_pred EEccccceeEE-EeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 160 LDVYEGFFKWV-QIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 160 ~d~~~~~~~W~-~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
+|+.+ ..-. .+. ... ... .+.....++.+++.|+.++ .+.++|+.+
T Consensus 213 ~d~~~--~~~~~~~~--------~~~-~~v-~~~~~~~~~~~l~~~~~dg------~v~vwd~~~ 259 (814)
T 3mkq_A 213 WDYQT--KSCVATLE--------GHM-SNV-SFAVFHPTLPIIISGSEDG------TLKIWNSST 259 (814)
T ss_dssp EETTT--TEEEEEEE--------CCS-SCE-EEEEECSSSSEEEEEETTS------CEEEEETTT
T ss_pred EECCC--CcEEEEEc--------CCC-CCE-EEEEEcCCCCEEEEEeCCC------eEEEEECCC
Confidence 99887 4322 221 111 111 1222224566777777654 377788763
No 135
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=50.62 E-value=1.5e+02 Score=27.03 Aligned_cols=165 Identities=12% Similarity=0.038 Sum_probs=77.5
Q ss_pred cccceeecccccccccccceEEecccC-CCCCCCCCCceeEEecCCEEEEEeccCCCCCccCcEEEEeccCCC-CCcCeE
Q 021952 40 HNDTWIGQIACHENLGITLSWRLLDVG-SIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENF-CFGSWQ 117 (305)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~W~~~~~~-~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~-~~~~W~ 117 (305)
.+.+.++|. .+.+-...-.. +..|.|..+.....-+.+.+|+.+-.+ .+.+.++|.++.. ....|+
T Consensus 363 sn~V~ViD~-------~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g-----~~~Vsvid~~~~~~~~~~~k 430 (567)
T 1qks_A 363 RNKLVVIDT-------KEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMG-----DDSVALIGTDPEGHPDNAWK 430 (567)
T ss_dssp GTEEEEEET-------TTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSS-----SSEEEEEECCTTTCTTTBTS
T ss_pred CCeEEEEEC-------CCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCC-----CCeEEEecCCCCCCccccCE
Confidence 356777888 45443322233 445555334433222335777765321 1347888877630 011387
Q ss_pred EcccCCCCCccCCCeeEEEeC-CEEEEEcccCCCCcccceeEEEEcccc-----ceeEEEeccccCCCCCCCC--CCcce
Q 021952 118 QLVTHPSPPARSGHSLTRIGG-NRTVLFGGRGVGYEVLNDVWFLDVYEG-----FFKWVQIPYELQNIPAGFS--LPRVG 189 (305)
Q Consensus 118 ~~~~~~~p~~r~~~~~~~~~~-~~i~v~GG~~~~~~~~~~~~~~d~~~~-----~~~W~~~~~~~~~~~~~~p--~~r~~ 189 (305)
.+..-..+... ...+....+ ..+|+---.+......+.+.+||+.+. ...++.+..... ..++ ..|..
T Consensus 431 vv~~i~~~g~g-~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~ 506 (567)
T 1qks_A 431 ILDSFPALGGG-SLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEW---AGITEGQPRVV 506 (567)
T ss_dssp EEEEEECSCSC-CCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHH---HTCCSSCCEEE
T ss_pred EEEEEecCCCC-CEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccc---cccCCCCcceE
Confidence 76611111111 111222223 357774322222224568999999872 112344420000 0122 23555
Q ss_pred eEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 190 HSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 190 ~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
|....-.++.+|+.-... ....+.|.++|.+
T Consensus 507 ~~~~~~~G~~~~~s~~~~--~~~~~~i~v~D~~ 537 (567)
T 1qks_A 507 QGEFNKDGTEVWFSVWNG--KDQESALVVVDDK 537 (567)
T ss_dssp EEEECTTSSEEEEEEECC--TTSCCEEEEEETT
T ss_pred eeeECCCCCEEEEEeecC--CCCCCcEEEEECC
Confidence 544332356788763321 1125679999987
No 136
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=50.27 E-value=23 Score=30.16 Aligned_cols=63 Identities=11% Similarity=0.129 Sum_probs=30.9
Q ss_pred EeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCc
Q 021952 136 IGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDD 215 (305)
Q Consensus 136 ~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~ 215 (305)
+.++.+|+.+.. ..++.+|..++...|+.-. .. .. .+.+. .++.+|+.++.+. .
T Consensus 7 v~~~~v~~gs~d-------g~v~a~d~~tG~~~W~~~~-------~~----~~-s~p~~-~~g~~~v~~s~dg------~ 60 (369)
T 2hz6_A 7 LPETLLFVSTLD-------GSLHAVSKRTGSIKWTLKE-------DP----VL-QVPTH-VEEPAFLPDPNDG------S 60 (369)
T ss_dssp -CTTEEEEEETT-------SEEEEEETTTCCEEEEEEC-------CC----SC-CCC------CCEEECTTTC------C
T ss_pred eeCCEEEEEcCC-------CEEEEEECCCCCEEEEecC-------CC----ce-ecceE-cCCCEEEEeCCCC------E
Confidence 335666665432 2599999998778898651 11 11 11222 4566777764432 3
Q ss_pred EEEEecCCC
Q 021952 216 FWVLDTKAI 224 (305)
Q Consensus 216 ~~~~d~~~~ 224 (305)
++.+|.++.
T Consensus 61 l~a~d~~tG 69 (369)
T 2hz6_A 61 LYTLGSKNN 69 (369)
T ss_dssp EEEC-----
T ss_pred EEEEECCCC
Confidence 788887643
No 137
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=49.91 E-value=1.7e+02 Score=27.46 Aligned_cols=110 Identities=11% Similarity=-0.006 Sum_probs=57.4
Q ss_pred eEEecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCccccee
Q 021952 78 ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDV 157 (305)
Q Consensus 78 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~ 157 (305)
.+...++.|++.+|.. +-+++||++++ +++.+.....+......++....++.|++.. . ..+
T Consensus 477 i~~d~~g~lWi~~~t~------~Gl~~~d~~~~----~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~-------~Gl 538 (758)
T 3ott_A 477 IIPDNEGNVWVLLYNN------KGIDKINPRTR----EVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H-------GGV 538 (758)
T ss_dssp EEECTTSCEEEEETTC------SSEEEEETTTT----EEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T-------TEE
T ss_pred EEEcCCCCEEEEccCC------CCcEEEeCCCC----ceEEecCCCcCCCcccceEEECCCCCEEEEe-c-------Cce
Confidence 3334445788866642 24899999987 7777642111111112233333445677542 2 138
Q ss_pred EEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 158 WFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 158 ~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
.+||+.+ .+++... ...+|... ..+.+. .++.||+-... .+.+||+++
T Consensus 539 ~~~~~~~--~~~~~~~------~~gl~~~~-i~~i~~-~~g~lWi~t~~--------Gl~~~~~~~ 586 (758)
T 3ott_A 539 MRINPKD--ESQQSIS------FGSFSNNE-ILSMTC-VKNSIWVSTTN--------GLWIIDRKT 586 (758)
T ss_dssp EEECC----CCCCBCC------CCC---CC-EEEEEE-ETTEEEEEESS--------CEEEEETTT
T ss_pred EEEecCC--CceEEec------ccCCCccc-eEEEEE-CCCCEEEECCC--------CeEEEcCCC
Confidence 8999988 6665542 12333322 222333 57888886621 278888873
No 138
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=49.79 E-value=1.2e+02 Score=25.83 Aligned_cols=105 Identities=12% Similarity=0.121 Sum_probs=51.9
Q ss_pred EEEECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCCcc
Q 021952 20 CVVIGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRL 99 (305)
Q Consensus 20 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~~ 99 (305)
+...+++.++.|+... .+.++|+ .+.+-...-. .....-.++..++ .+++.|+.+
T Consensus 138 ~~~~d~~~l~~g~~dg------~i~iwd~-------~~~~~~~~~~-----~h~~~v~~l~~~~-~~l~sg~~d------ 192 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDN------TIKIWDK-------NTLECKRILT-----GHTGSVLCLQYDE-RVIITGSSD------ 192 (435)
T ss_dssp EEECCSSEEEEEESSS------CEEEEES-------SSCCEEEEEC-----CCSSCEEEEECCS-SEEEEEETT------
T ss_pred EEEECCCEEEEEeCCC------eEEEEeC-------CCCeEEEEEc-----CCCCcEEEEEECC-CEEEEEcCC------
Confidence 3444666777776542 4667777 3333222111 1111223333344 677777752
Q ss_pred CcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccc
Q 021952 100 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYE 164 (305)
Q Consensus 100 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~ 164 (305)
..+.++|+.++ +...... . . ...-.++... +..++.|+.+ ..+..+|+.+
T Consensus 193 g~i~vwd~~~~----~~~~~~~-~-h--~~~v~~l~~~-~~~l~s~s~d------g~i~vwd~~~ 242 (435)
T 1p22_A 193 STVRVWDVNTG----EMLNTLI-H-H--CEAVLHLRFN-NGMMVTCSKD------RSIAVWDMAS 242 (435)
T ss_dssp SCEEEEESSSC----CEEEEEC-C-C--CSCEEEEECC-TTEEEEEETT------SCEEEEECSS
T ss_pred CeEEEEECCCC----cEEEEEc-C-C--CCcEEEEEEc-CCEEEEeeCC------CcEEEEeCCC
Confidence 34888998876 4322221 1 1 1111223333 3466666653 2478888876
No 139
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=49.36 E-value=99 Score=24.67 Aligned_cols=73 Identities=12% Similarity=0.161 Sum_probs=36.1
Q ss_pred ceeEEecCCEEEEEeccC---------CCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEE----eCC-EE
Q 021952 76 HAACCIDNRKMVIHAGIG---------LYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRI----GGN-RT 141 (305)
Q Consensus 76 ~~~~~~~~~~lyv~GG~~---------~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~----~~~-~i 141 (305)
+..+...++.+|+..... ........++++|++ . +...+.. ... ....++.. .++ .+
T Consensus 120 ~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g----~~~~~~~-~~~---~~~~i~~~~~~d~dg~~l 190 (314)
T 1pjx_A 120 NDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G----QMIQVDT-AFQ---FPNGIAVRHMNDGRPYQL 190 (314)
T ss_dssp CEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S----CEEEEEE-EES---SEEEEEEEECTTSCEEEE
T ss_pred cCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-C----CEEEecc-CCC---CcceEEEecccCCCCCEE
Confidence 344444455788765321 011123568899876 4 5544431 101 11233344 444 46
Q ss_pred EEEcccCCCCcccceeEEEEcc
Q 021952 142 VLFGGRGVGYEVLNDVWFLDVY 163 (305)
Q Consensus 142 ~v~GG~~~~~~~~~~~~~~d~~ 163 (305)
|+.... .+.+++||+.
T Consensus 191 ~v~~~~------~~~i~~~~~~ 206 (314)
T 1pjx_A 191 IVAETP------TKKLWSYDIK 206 (314)
T ss_dssp EEEETT------TTEEEEEEEE
T ss_pred EEEECC------CCeEEEEECC
Confidence 665432 1458889876
No 140
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=47.96 E-value=1.1e+02 Score=24.90 Aligned_cols=104 Identities=12% Similarity=0.184 Sum_probs=54.4
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
.+++.++.|+. ...+.++|+.+. +-....... ...-.+++...+++.++.|+.+ ..+..+|
T Consensus 132 pdg~~l~~g~~------dg~v~i~~~~~~----~~~~~~~~~---~~~v~~~~~spdg~~lasg~~d------g~i~iwd 192 (321)
T 3ow8_A 132 PDSQYLATGTH------VGKVNIFGVESG----KKEYSLDTR---GKFILSIAYSPDGKYLASGAID------GIINIFD 192 (321)
T ss_dssp TTSSEEEEECT------TSEEEEEETTTC----SEEEEEECS---SSCEEEEEECTTSSEEEEEETT------SCEEEEE
T ss_pred CCCCEEEEEcC------CCcEEEEEcCCC----ceeEEecCC---CceEEEEEECCCCCEEEEEcCC------CeEEEEE
Confidence 34466777664 234788888775 322111101 1111233444456777777764 2488999
Q ss_pred ccccceeEE-EeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 162 VYEGFFKWV-QIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 162 ~~~~~~~W~-~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
+++ .+-. .+. ....+ . .+.....++.+++.|+.+. .+.++|+.
T Consensus 193 ~~~--~~~~~~~~--------~h~~~-v-~~l~~spd~~~l~s~s~dg------~i~iwd~~ 236 (321)
T 3ow8_A 193 IAT--GKLLHTLE--------GHAMP-I-RSLTFSPDSQLLVTASDDG------YIKIYDVQ 236 (321)
T ss_dssp TTT--TEEEEEEC--------CCSSC-C-CEEEECTTSCEEEEECTTS------CEEEEETT
T ss_pred CCC--CcEEEEEc--------ccCCc-e-eEEEEcCCCCEEEEEcCCC------eEEEEECC
Confidence 987 4332 221 11111 1 1222224667788887654 37888876
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=47.08 E-value=1.6e+02 Score=27.23 Aligned_cols=111 Identities=14% Similarity=0.128 Sum_probs=55.3
Q ss_pred CCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccC--CCCC--------------c-----cCCCeeEEEeCCEE
Q 021952 83 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTH--PSPP--------------A-----RSGHSLTRIGGNRT 141 (305)
Q Consensus 83 ~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~--~~p~--------------~-----r~~~~~~~~~~~~i 141 (305)
+++.+++++....+.....++++|+.++ +...+... ..|. . ..-...+...+++.
T Consensus 47 dG~~la~~~~~d~~~~~~~i~~~d~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~ 122 (741)
T 2ecf_A 47 DGSRVTFLRGKDSDRNQLDLWSYDIGSG----QTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQR 122 (741)
T ss_dssp TSSEEEEEECCSSCTTEEEEEEEETTTC----CEEEEECGGGTC--------------------CCEESCCCEECTTSSE
T ss_pred CCCEEEEEeccCCCCcccEEEEEECCCC----ceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCE
Confidence 3355555553111122457999999887 66555411 1100 0 00123444445666
Q ss_pred EEEcccCCCCcccceeEEEEccccce---eEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEE
Q 021952 142 VLFGGRGVGYEVLNDVWFLDVYEGFF---KWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWV 218 (305)
Q Consensus 142 ~v~GG~~~~~~~~~~~~~~d~~~~~~---~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~ 218 (305)
++++.. ..++.+|+.+ . .-..+. ... ..... ....-+++.++++.. ++|++
T Consensus 123 l~~~~~-------~~i~~~d~~~--~~~~~~~~l~--------~~~-~~~~~-~~~SPDG~~la~~~~-------~~i~~ 176 (741)
T 2ecf_A 123 LLFPLG-------GELYLYDLKQ--EGKAAVRQLT--------HGE-GFATD-AKLSPKGGFVSFIRG-------RNLWV 176 (741)
T ss_dssp EEEEET-------TEEEEEESSS--CSTTSCCBCC--------CSS-SCEEE-EEECTTSSEEEEEET-------TEEEE
T ss_pred EEEEeC-------CcEEEEECCC--CCcceEEEcc--------cCC-ccccc-ccCCCCCCEEEEEeC-------CcEEE
Confidence 666543 5799999988 5 433332 111 11122 222245555555532 26999
Q ss_pred EecCC
Q 021952 219 LDTKA 223 (305)
Q Consensus 219 ~d~~~ 223 (305)
+|+.+
T Consensus 177 ~d~~~ 181 (741)
T 2ecf_A 177 IDLAS 181 (741)
T ss_dssp EETTT
T ss_pred EecCC
Confidence 99873
No 142
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=46.43 E-value=62 Score=27.58 Aligned_cols=69 Identities=4% Similarity=-0.081 Sum_probs=39.2
Q ss_pred cCCEEEEEeccCCC---CCccCcEEEEeccCCCCCcCe-EEcccCCCCCccCCCeeEEEeCCE-EEEEcccCCCCcccce
Q 021952 82 DNRKMVIHAGIGLY---GLRLGDTWVLELSENFCFGSW-QQLVTHPSPPARSGHSLTRIGGNR-TVLFGGRGVGYEVLND 156 (305)
Q Consensus 82 ~~~~lyv~GG~~~~---~~~~~~~~~~d~~~~~~~~~W-~~~~~~~~p~~r~~~~~~~~~~~~-i~v~GG~~~~~~~~~~ 156 (305)
+++++|+....... ....++++++|+++. +- ..++. +...+.++...+++ +++..... .++
T Consensus 277 d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~----~vv~~i~~-----g~~p~~i~~s~Dg~~~l~v~~~~-----~~~ 342 (373)
T 2mad_H 277 SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG----QTSSQISL-----GHDVDAISVAQDGGPDLYALSAG-----TEV 342 (373)
T ss_pred CCCEEEEEeccCCcccccCCCCeEEEEECCCC----EEEEEEEC-----CCCcCeEEECCCCCeEEEEEcCC-----CCe
Confidence 34588886542111 123578999999876 32 33332 22345555555555 44443321 267
Q ss_pred eEEEEccc
Q 021952 157 VWFLDVYE 164 (305)
Q Consensus 157 ~~~~d~~~ 164 (305)
+.++|+.+
T Consensus 343 V~ViD~~t 350 (373)
T 2mad_H 343 LHIYDAGA 350 (373)
T ss_pred EEEEECCC
Confidence 99999988
No 143
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=46.39 E-value=1.7e+02 Score=26.58 Aligned_cols=101 Identities=12% Similarity=0.021 Sum_probs=49.9
Q ss_pred CCEEEEEccccCCCCCcccceeecccccccccccceEE-ecccCCCCCCCCCCceeEEe-cCCEEEEEeccCCCCCccCc
Q 021952 24 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWR-LLDVGSIAPPARGAHAACCI-DNRKMVIHAGIGLYGLRLGD 101 (305)
Q Consensus 24 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~-~~~~~~~~p~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~ 101 (305)
++.+|+.... .+.+.++|. .+.+-. .+. ....-|....- +++++|+.+. .+.
T Consensus 166 ~~~~~V~~~~------~~~V~viD~-------~t~~v~~~i~------~g~~p~~v~~SpDGr~lyv~~~-------dg~ 219 (567)
T 1qks_A 166 ENLFSVTLRD------AGQIALIDG-------STYEIKTVLD------TGYAVHISRLSASGRYLFVIGR-------DGK 219 (567)
T ss_dssp GGEEEEEETT------TTEEEEEET-------TTCCEEEEEE------CSSCEEEEEECTTSCEEEEEET-------TSE
T ss_pred CceEEEEeCC------CCeEEEEEC-------CCCeEEEEEe------CCCCccceEECCCCCEEEEEcC-------CCe
Confidence 4556665421 346888888 454433 222 22223333332 4457777542 246
Q ss_pred EEEEecc--CCCCCcCeEEcccCCCCCccCCCeeEEE-----eCCEEEEEcccCCCCcccceeEEEEccc
Q 021952 102 TWVLELS--ENFCFGSWQQLVTHPSPPARSGHSLTRI-----GGNRTVLFGGRGVGYEVLNDVWFLDVYE 164 (305)
Q Consensus 102 ~~~~d~~--~~~~~~~W~~~~~~~~p~~r~~~~~~~~-----~~~~i~v~GG~~~~~~~~~~~~~~d~~~ 164 (305)
+.++|+. +. . .-..++.+. .|| .+++. .+..+|+..-. .+.+.++|..+
T Consensus 220 V~viD~~~~t~--~-~v~~i~~G~--~P~---~ia~s~~~~pDGk~l~v~n~~------~~~v~ViD~~t 275 (567)
T 1qks_A 220 VNMIDLWMKEP--T-TVAEIKIGS--EAR---SIETSKMEGWEDKYAIAGAYW------PPQYVIMDGET 275 (567)
T ss_dssp EEEEETTSSSC--C-EEEEEECCS--EEE---EEEECCSTTCTTTEEEEEEEE------TTEEEEEETTT
T ss_pred EEEEECCCCCC--c-EeEEEecCC--CCc---eeEEccccCCCCCEEEEEEcc------CCeEEEEECCC
Confidence 9999995 43 0 122333222 222 23333 23356655322 25678889877
No 144
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=45.97 E-value=1.8e+02 Score=26.64 Aligned_cols=84 Identities=13% Similarity=0.138 Sum_probs=45.8
Q ss_pred CEEEEEeccCCCCCccCcEEEEeccCC-CCCcCeEEccc--CCCCCccCCCeeEEEeC-CEEEEEc-ccCCCCcccceeE
Q 021952 84 RKMVIHAGIGLYGLRLGDTWVLELSEN-FCFGSWQQLVT--HPSPPARSGHSLTRIGG-NRTVLFG-GRGVGYEVLNDVW 158 (305)
Q Consensus 84 ~~lyv~GG~~~~~~~~~~~~~~d~~~~-~~~~~W~~~~~--~~~p~~r~~~~~~~~~~-~~i~v~G-G~~~~~~~~~~~~ 158 (305)
.+-+++||+..-+ +.+|.+|+..- ...+-|+.-.. ..+-.-......+.+.+ .-+.||| |++. ..--..++
T Consensus 151 wrtvLvggmg~GG---~~~yALDVT~P~~p~~LWe~~~~~~~~LG~t~s~P~I~~~~~g~w~~vfG~GY~~-~~~~~~Ly 226 (570)
T 3hx6_A 151 WHTVLIGSLRAGG---KGLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVARLHNGKWAVVTGNGYSS-MNDKAALL 226 (570)
T ss_dssp EEEEEEEECTTSC---SEEEEEECSSGGGCEEEEEEETTTCTTCCBCCSCCEEEECTTSSEEEEEECCBSC-TTCCEEEE
T ss_pred ceEEEEEecCCCC---cEEEEEECCCCCCCceeEEECCCCccccCccccCCEEEEecCCCEEEEEccccCC-CCCccEEE
Confidence 3678899875444 35788887541 13456776531 11222222233333322 3455555 5543 22345799
Q ss_pred EEEccccceeEEE
Q 021952 159 FLDVYEGFFKWVQ 171 (305)
Q Consensus 159 ~~d~~~~~~~W~~ 171 (305)
++|+++++..|+-
T Consensus 227 v~d~~tG~li~~i 239 (570)
T 3hx6_A 227 IIDMETGAITRKL 239 (570)
T ss_dssp EEETTTCCEEEEE
T ss_pred EEECCCCceEEEE
Confidence 9999996666654
No 145
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=45.80 E-value=1.2e+02 Score=24.70 Aligned_cols=21 Identities=14% Similarity=0.001 Sum_probs=13.6
Q ss_pred eCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 196 LGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 196 ~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
..+.+++.||.+. .+.++|..
T Consensus 259 s~~~~l~s~~~dg------~v~iw~~~ 279 (330)
T 2hes_X 259 GFNGLIASVGADG------VLAVYEEV 279 (330)
T ss_dssp CTTSCEEEEETTS------CEEEEEEE
T ss_pred cCCCEEEEEeCCC------EEEEEEcC
Confidence 3455677777654 37777766
No 146
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=45.78 E-value=1.3e+02 Score=24.94 Aligned_cols=76 Identities=9% Similarity=0.027 Sum_probs=37.4
Q ss_pred CeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEE-eccccCCCCCCC-CCCcceeEEEEEeCCEEEEEeccCC
Q 021952 131 HSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQ-IPYELQNIPAGF-SLPRVGHSATLILGGRVLIYGGEDS 208 (305)
Q Consensus 131 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~-~~~~~~~~~~~~-p~~r~~~~~~~~~~~~l~v~GG~~~ 208 (305)
.++....++ +++.|+.+ ..+..||+.+ .+-.. +. ..... +....-.+.....++.+++.|+.+.
T Consensus 190 ~~~~~~~~~-~l~~~~~d------g~i~i~d~~~--~~~~~~~~-----~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~ 255 (397)
T 1sq9_A 190 TSVDISERG-LIATGFNN------GTVQISELST--LRPLYNFE-----SQHSMINNSNSIRSVKFSPQGSLLAIAHDSN 255 (397)
T ss_dssp CEEEECTTS-EEEEECTT------SEEEEEETTT--TEEEEEEE-----CCC---CCCCCEEEEEECSSTTEEEEEEEET
T ss_pred eEEEECCCc-eEEEEeCC------CcEEEEECCC--CceeEEEe-----ccccccccCCccceEEECCCCCEEEEEecCC
Confidence 344455456 77776653 3588999987 43322 21 00001 0011112222224566777777641
Q ss_pred CCCccCcEEEEecCC
Q 021952 209 ARRRKDDFWVLDTKA 223 (305)
Q Consensus 209 ~~~~~~~~~~~d~~~ 223 (305)
. ...+.+||+.+
T Consensus 256 ~---~g~i~i~d~~~ 267 (397)
T 1sq9_A 256 S---FGCITLYETEF 267 (397)
T ss_dssp T---EEEEEEEETTT
T ss_pred C---CceEEEEECCC
Confidence 0 13588899873
No 147
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=45.02 E-value=1.3e+02 Score=24.68 Aligned_cols=106 Identities=12% Similarity=0.132 Sum_probs=54.1
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
.++.+++.|+.+ ..+.++|+.+. +-...-.+. . ..-.+++...++..++.|+.+ ..+..+|
T Consensus 194 ~~~~~l~sg~~d------~~v~~wd~~~~----~~~~~~~~h-~--~~v~~v~~~p~~~~l~s~s~d------~~v~iwd 254 (340)
T 1got_B 194 PDTRLFVSGACD------ASAKLWDVREG----MCRQTFTGH-E--SDINAICFFPNGNAFATGSDD------ATCRLFD 254 (340)
T ss_dssp TTSSEEEEEETT------SCEEEEETTTC----SEEEEECCC-S--SCEEEEEECTTSSEEEEEETT------SCEEEEE
T ss_pred CCCCEEEEEeCC------CcEEEEECCCC----eeEEEEcCC-c--CCEEEEEEcCCCCEEEEEcCC------CcEEEEE
Confidence 344677777752 24788898775 332221110 0 111223333456677777764 2488899
Q ss_pred ccccceeEEEeccccCCCCCCCCCCcceeEEEEE-eCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 162 VYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLI-LGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 162 ~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
+.+ ..-.... ..+.....-..+.+ .++.+++.|+.+. .+.++|..
T Consensus 255 ~~~--~~~~~~~--------~~~~~~~~v~~~~~s~~g~~l~~g~~d~------~i~vwd~~ 300 (340)
T 1got_B 255 LRA--DQELMTY--------SHDNIICGITSVSFSKSGRLLLAGYDDF------NCNVWDAL 300 (340)
T ss_dssp TTT--TEEEEEE--------CCTTCCSCEEEEEECTTSSEEEEEETTS------EEEEEETT
T ss_pred CCC--CcEEEEE--------ccCCcccceEEEEECCCCCEEEEECCCC------eEEEEEcc
Confidence 887 4322110 11111111122222 4667788887653 48888876
No 148
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=44.72 E-value=1.2e+02 Score=24.33 Aligned_cols=186 Identities=12% Similarity=0.014 Sum_probs=0.0
Q ss_pred CCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCCccCcEE
Q 021952 24 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTW 103 (305)
Q Consensus 24 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 103 (305)
++.+++.|+... .+..+|+ ...+....... .-.......+..-.+..+++.|+.+.. +.
T Consensus 108 ~~~~l~sgs~D~------~v~lWd~--------~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~sgs~D~~------v~ 166 (304)
T 2ynn_A 108 TKPYVLSGSDDL------TVKLWNW--------ENNWALEQTFE-GHEHFVMCVAFNPKDPSTFASGCLDRT------VK 166 (304)
T ss_dssp SSSEEEEEETTS------CEEEEEG--------GGTTEEEEEEC-CCCSCEEEEEECTTCTTEEEEEETTSE------EE
T ss_pred CCCEEEEECCCC------eEEEEEC--------CCCcchhhhhc-ccCCcEEEEEECCCCCCEEEEEeCCCe------EE
Q ss_pred EEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCCCCC
Q 021952 104 VLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGF 183 (305)
Q Consensus 104 ~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~ 183 (305)
++|+.+. +-..........+..........++.+++.|+.+ ..+..+|+++ .+-...- ..
T Consensus 167 iwd~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D------~~i~iWd~~~--~~~~~~~--------~~ 226 (304)
T 2ynn_A 167 VWSLGQS----TPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD------LTIKIWDYQT--KSCVATL--------EG 226 (304)
T ss_dssp EEETTCS----SCSEEEECCCTTCEEEEEECCSTTCCEEEEEETT------SEEEEEETTT--TEEEEEE--------EC
T ss_pred EEECCCC----CccceeccCCcCcEEEEEEEEcCCCCEEEEEcCC------CeEEEEeCCC--Cccceee--------CC
Q ss_pred CCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCCCccccccccccccccccccceeecccCcCCCCCceeeee
Q 021952 184 SLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRAC 263 (305)
Q Consensus 184 p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~v~~~~~~p~~r~~~~~~ 263 (305)
........+.. .++.+++.|+.+.. +.++|.. +.+-.+.-. ....+. .+.+
T Consensus 227 h~~~v~~~~~~-p~~~~l~s~s~Dg~------i~iWd~~------------------~~~~~~~~~---~~~~~~-~~~~ 277 (304)
T 2ynn_A 227 HMSNVSFAVFH-PTLPIIISGSEDGT------LKIWNSS------------------TYKVEKTLN---VGLERS-WCIA 277 (304)
T ss_dssp CSSCEEEEEEC-SSSSEEEEEETTSC------EEEEETT------------------TCCEEEEEC---CSSSSE-EEEE
T ss_pred CCCCEEEEEEC-CCCCEEEEEcCCCe------EEEEECC------------------CCceeeecc---CCCccE-EEEE
Q ss_pred eeCCCcEEEEEcCccC
Q 021952 264 PDYSGRYLYVFGGMVD 279 (305)
Q Consensus 264 ~~~~~~~i~v~GG~~~ 279 (305)
....++..++..|..+
T Consensus 278 ~~~~~~~~~~asg~~~ 293 (304)
T 2ynn_A 278 THPTGRKNYIASGFDN 293 (304)
T ss_dssp ECTTCGGGCEEEEETT
T ss_pred ECCCCCceEEEEecCC
No 149
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=43.58 E-value=1.5e+02 Score=25.18 Aligned_cols=102 Identities=11% Similarity=0.224 Sum_probs=50.7
Q ss_pred ecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeE---EcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCccccee
Q 021952 81 IDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQ---QLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDV 157 (305)
Q Consensus 81 ~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~---~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~ 157 (305)
..+ .+++.|+.+ ..+.++|+.+. +-. .... . ......++... +..++.|+.+ ..+
T Consensus 221 ~~~-~~l~s~s~d------g~i~vwd~~~~----~~~~~~~~~~-~---~~~~v~~~~~~-~~~l~s~~~d------g~i 278 (435)
T 1p22_A 221 FNN-GMMVTCSKD------RSIAVWDMASP----TDITLRRVLV-G---HRAAVNVVDFD-DKYIVSASGD------RTI 278 (435)
T ss_dssp CCT-TEEEEEETT------SCEEEEECSSS----SCCEEEEEEC-C---CSSCEEEEEEE-TTEEEEEETT------SEE
T ss_pred EcC-CEEEEeeCC------CcEEEEeCCCC----CCceeeeEec-C---CCCcEEEEEeC-CCEEEEEeCC------CeE
Confidence 344 466666642 34888888775 211 1111 1 11112233333 4455566543 358
Q ss_pred EEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 158 WFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 158 ~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
..+|+.+ .+-...- .... ....++. .++.+++.|+.++ .+.++|+.+
T Consensus 279 ~vwd~~~--~~~~~~~-------~~~~---~~v~~~~-~~~~~l~~g~~dg------~i~iwd~~~ 325 (435)
T 1p22_A 279 KVWNTST--CEFVRTL-------NGHK---RGIACLQ-YRDRLVVSGSSDN------TIRLWDIEC 325 (435)
T ss_dssp EEEETTT--CCEEEEE-------ECCS---SCEEEEE-EETTEEEEEETTS------CEEEEETTT
T ss_pred EEEECCc--CcEEEEE-------cCCC---CcEEEEE-eCCCEEEEEeCCC------eEEEEECCC
Confidence 8999988 4322210 0111 1112223 3456777777654 388899873
No 150
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=42.71 E-value=1.3e+02 Score=24.27 Aligned_cols=65 Identities=11% Similarity=0.097 Sum_probs=34.6
Q ss_pred eCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcE
Q 021952 137 GGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDF 216 (305)
Q Consensus 137 ~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~ 216 (305)
.++..++.|+.+ ..+..||+.++......+. ... .. -.+.....++.+++.|+.+. .+
T Consensus 185 ~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~--------~~~-~~-v~~~~~~~~~~~l~~~~~d~------~i 242 (369)
T 3zwl_B 185 TKGKYIIAGHKD------GKISKYDVSNNYEYVDSID--------LHE-KS-ISDMQFSPDLTYFITSSRDT------NS 242 (369)
T ss_dssp GGGCEEEEEETT------SEEEEEETTTTTEEEEEEE--------CCS-SC-EEEEEECTTSSEEEEEETTS------EE
T ss_pred CCCCEEEEEcCC------CEEEEEECCCCcEeEEEEe--------cCC-Cc-eeEEEECCCCCEEEEecCCc------eE
Confidence 345566666653 3588999976223333332 111 11 12222223566777776543 48
Q ss_pred EEEecCC
Q 021952 217 WVLDTKA 223 (305)
Q Consensus 217 ~~~d~~~ 223 (305)
.++|+.+
T Consensus 243 ~v~d~~~ 249 (369)
T 3zwl_B 243 FLVDVST 249 (369)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 8899873
No 151
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=41.88 E-value=1.2e+02 Score=23.50 Aligned_cols=110 Identities=9% Similarity=-0.019 Sum_probs=55.7
Q ss_pred eeEEecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccce
Q 021952 77 AACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLND 156 (305)
Q Consensus 77 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~ 156 (305)
.++...++++|+.... ...+++++..+. ......... ...-..++...++.+|+..... +.
T Consensus 112 ~i~~~~~g~l~v~~~~------~~~i~~~~~~~~----~~~~~~~~~---~~~p~~i~~~~~g~l~v~~~~~------~~ 172 (270)
T 1rwi_B 112 GLAVDTQGAVYVADRG------NNRVVKLAAGSK----TQTVLPFTG---LNDPDGVAVDNSGNVYVTDTDN------NR 172 (270)
T ss_dssp EEEECTTCCEEEEEGG------GTEEEEECTTCC----SCEECCCCS---CCSCCCEEECTTCCEEEEEGGG------TE
T ss_pred ceEECCCCCEEEEECC------CCEEEEEECCCc----eeEeecccc---CCCceeEEEeCCCCEEEEECCC------CE
Confidence 3444445578886542 235788876654 333322111 1122344454456788765431 35
Q ss_pred eEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 157 VWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 157 ~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
+.+||... ..-.... ...+. .-...+...++.+|+..... +.+.+||+.
T Consensus 173 i~~~~~~~--~~~~~~~------~~~~~---~p~~i~~d~~g~l~v~~~~~------~~v~~~~~~ 221 (270)
T 1rwi_B 173 VVKLEAES--NNQVVLP------FTDIT---APWGIAVDEAGTVYVTEHNT------NQVVKLLAG 221 (270)
T ss_dssp EEEECTTT--CCEEECC------CSSCC---SEEEEEECTTCCEEEEETTT------SCEEEECTT
T ss_pred EEEEecCC--CceEeec------ccCCC---CceEEEECCCCCEEEEECCC------CcEEEEcCC
Confidence 89999877 4433321 11111 11223332345788876432 348899886
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=41.82 E-value=2.1e+02 Score=26.24 Aligned_cols=60 Identities=12% Similarity=0.012 Sum_probs=30.3
Q ss_pred cceeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 154 LNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 154 ~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
...++++|+.+ .+-..+. ................+++.++++..+.. .....++++|+.+
T Consensus 234 ~~~l~~~d~~~--~~~~~~~-------~~~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~~v~~~d~~~ 293 (706)
T 2z3z_A 234 HVTVGIYHLAT--GKTVYLQ-------TGEPKEKFLTNLSWSPDENILYVAEVNRA-QNECKVNAYDAET 293 (706)
T ss_dssp EEEEEEEETTT--TEEEECC-------CCSCTTCEEEEEEECTTSSEEEEEEECTT-SCEEEEEEEETTT
T ss_pred eeEEEEEECCC--CceEeec-------cCCCCceeEeeEEEECCCCEEEEEEeCCC-CCeeEEEEEECCC
Confidence 35699999988 6655552 11111112112222245554555444321 2245788999874
No 153
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=40.05 E-value=1.5e+02 Score=24.00 Aligned_cols=67 Identities=7% Similarity=-0.084 Sum_probs=33.5
Q ss_pred CCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEc
Q 021952 83 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDV 162 (305)
Q Consensus 83 ~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~ 162 (305)
++++++.|+. + ..+.++|+.+. +..... ..+ ..-.++....++..++.++.. .......+..||+
T Consensus 85 ~~~~l~s~~~--d----g~i~iwd~~~~----~~~~~~--~~~--~~v~~~~~~~~~~~l~~~~~~-~~~~~g~i~~~d~ 149 (369)
T 3zwl_B 85 FTKYCVTGSA--D----YSIKLWDVSNG----QCVATW--KSP--VPVKRVEFSPCGNYFLAILDN-VMKNPGSINIYEI 149 (369)
T ss_dssp TSSEEEEEET--T----TEEEEEETTTC----CEEEEE--ECS--SCEEEEEECTTSSEEEEEECC-BTTBCCEEEEEEE
T ss_pred CCCEEEEEeC--C----CeEEEEECCCC----cEEEEe--ecC--CCeEEEEEccCCCEEEEecCC-ccCCCCEEEEEEe
Confidence 3456677664 2 35888998876 433322 111 111233334445566665542 1112235777777
Q ss_pred cc
Q 021952 163 YE 164 (305)
Q Consensus 163 ~~ 164 (305)
..
T Consensus 150 ~~ 151 (369)
T 3zwl_B 150 ER 151 (369)
T ss_dssp EE
T ss_pred cC
Confidence 65
No 154
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=39.58 E-value=1.7e+02 Score=24.55 Aligned_cols=105 Identities=10% Similarity=0.079 Sum_probs=54.4
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
.++++++.|+.+ ..+.++|+.+. +-...-.+. ...-.++....++..++.|+.+ ..+..+|
T Consensus 133 ~dg~~l~s~~~d------~~i~iwd~~~~----~~~~~~~~h---~~~v~~~~~~p~~~~l~s~s~d------~~v~iwd 193 (393)
T 1erj_A 133 PDGKFLATGAED------RLIRIWDIENR----KIVMILQGH---EQDIYSLDYFPSGDKLVSGSGD------RTVRIWD 193 (393)
T ss_dssp TTSSEEEEEETT------SCEEEEETTTT----EEEEEECCC---SSCEEEEEECTTSSEEEEEETT------SEEEEEE
T ss_pred CCCCEEEEEcCC------CeEEEEECCCC----cEEEEEccC---CCCEEEEEEcCCCCEEEEecCC------CcEEEEE
Confidence 344677777652 34888998875 332222111 1111233333345566666653 3588889
Q ss_pred ccccceeEEEeccccCCCCCCCCCCcceeEEEEEe-CCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 162 VYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLIL-GGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 162 ~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
+++ ....... .... ...+..... ++.+++.|+.+. .+.++|+.+
T Consensus 194 ~~~--~~~~~~~--------~~~~--~v~~~~~~~~~~~~l~~~s~d~------~v~iwd~~~ 238 (393)
T 1erj_A 194 LRT--GQCSLTL--------SIED--GVTTVAVSPGDGKYIAAGSLDR------AVRVWDSET 238 (393)
T ss_dssp TTT--TEEEEEE--------ECSS--CEEEEEECSTTCCEEEEEETTS------CEEEEETTT
T ss_pred CCC--CeeEEEE--------EcCC--CcEEEEEECCCCCEEEEEcCCC------cEEEEECCC
Confidence 988 5443221 1111 111222212 567888888754 378888763
No 155
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=39.11 E-value=1.8e+02 Score=24.66 Aligned_cols=104 Identities=9% Similarity=0.133 Sum_probs=52.2
Q ss_pred CEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEcc
Q 021952 84 RKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVY 163 (305)
Q Consensus 84 ~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~ 163 (305)
+.+++.|+.+ ..+.++|..+. +....-.+ .. ..-.+++...++.+++.|+.+ ..+..+|+.
T Consensus 120 ~~~l~s~s~D------g~i~vwd~~~~----~~~~~l~~--h~-~~V~~v~~~~~~~~l~sgs~D------~~i~iwd~~ 180 (410)
T 1vyh_C 120 FSVMVSASED------ATIKVWDYETG----DFERTLKG--HT-DSVQDISFDHSGKLLASCSAD------MTIKLWDFQ 180 (410)
T ss_dssp SSEEEEEESS------SCEEEEETTTC----CCCEEECC--CS-SCEEEEEECTTSSEEEEEETT------SCCCEEETT
T ss_pred CCEEEEEeCC------CeEEEEECCCC----cEEEEEec--cC-CcEEEEEEcCCCCEEEEEeCC------CeEEEEeCC
Confidence 3577777652 24888898876 33222111 10 111223333456677777764 236778887
Q ss_pred ccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 164 EGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 164 ~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
+ ..-...- .... ..-.+.....++..++.|+.+. .+.++|+.+
T Consensus 181 ~--~~~~~~~-------~~h~--~~V~~v~~~p~~~~l~s~s~D~------~i~~wd~~~ 223 (410)
T 1vyh_C 181 G--FECIRTM-------HGHD--HNVSSVSIMPNGDHIVSASRDK------TIKMWEVQT 223 (410)
T ss_dssp S--SCEEECC-------CCCS--SCEEEEEECSSSSEEEEEETTS------EEEEEETTT
T ss_pred C--CceeEEE-------cCCC--CCEEEEEEeCCCCEEEEEeCCC------eEEEEECCC
Confidence 7 4332210 0111 1111222223566777787654 478888873
No 156
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=38.54 E-value=2.4e+02 Score=25.99 Aligned_cols=104 Identities=12% Similarity=0.023 Sum_probs=50.1
Q ss_pred cEEEEeccC-CCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCC
Q 021952 101 DTWVLELSE-NFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNI 179 (305)
Q Consensus 101 ~~~~~d~~~-~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~ 179 (305)
.++++|+.+ + +-..+.... .....-..++. .+++.+++.... ......+++.+|+.+ .+...+.....
T Consensus 264 ~l~~~d~~~~~----~~~~~~~~~-~~~~~~~~~~~-pDg~~l~~~~~~-~~~~~~~i~~~d~~~--g~~~~~~~~~~-- 332 (741)
T 2ecf_A 264 KLGVISPAEQA----QTQWIDLGK-EQDIYLARVNW-RDPQHLSFQRQS-RDQKKLDLVEVTLAS--NQQRVLAHETS-- 332 (741)
T ss_dssp EEEEECSSTTC----CCEEECCCS-CSSEEEEEEEE-EETTEEEEEEEE-TTSSEEEEEEEETTT--CCEEEEEEEEC--
T ss_pred EEEEEECCCCC----ceEEecCCC-CcceEEEEEEe-CCCCEEEEEEec-ccCCeEEEEEEECCC--CceEEEEEcCC--
Confidence 788889887 6 544443110 11122223344 455555544332 112345799999998 66665531000
Q ss_pred CCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 180 PAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 180 ~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
.... ......+.. .++++++.+..++ ...+|.+|..
T Consensus 333 -~~~~-~~~~~~~~s-pdg~~~~~~~~~g----~~~l~~~~~~ 368 (741)
T 2ecf_A 333 -PTWV-PLHNSLRFL-DDGSILWSSERTG----FQHLYRIDSK 368 (741)
T ss_dssp -SSCC-CCCSCCEEC-TTSCEEEEECTTS----SCEEEEECSS
T ss_pred -CCcC-CcCCceEEC-CCCeEEEEecCCC----ccEEEEEcCC
Confidence 0000 001112222 4566666655432 3568888865
No 157
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=38.26 E-value=1.7e+02 Score=24.27 Aligned_cols=69 Identities=13% Similarity=0.134 Sum_probs=33.1
Q ss_pred CEEEEEeccCCCCCccCcEEEEeccCCCCCcC-eEEcccCC-CCCccCCCeeEEEeC-CEEEEEcccCCCCcccceeEEE
Q 021952 84 RKMVIHAGIGLYGLRLGDTWVLELSENFCFGS-WQQLVTHP-SPPARSGHSLTRIGG-NRTVLFGGRGVGYEVLNDVWFL 160 (305)
Q Consensus 84 ~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~-W~~~~~~~-~p~~r~~~~~~~~~~-~~i~v~GG~~~~~~~~~~~~~~ 160 (305)
+.+++.|+.+ ..+.++|+.+...... +....... ......-.++....+ +.+++.|+.+ ..+..+
T Consensus 126 ~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g~v~iw 193 (416)
T 2pm9_A 126 DNVLASGGNN------GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS------NFASIW 193 (416)
T ss_dssp TTBEEEECSS------SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS------SCEEEE
T ss_pred CCEEEEEcCC------CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC------CCEEEE
Confidence 4677777642 3488888887510000 00111000 011111223334333 4577777653 248899
Q ss_pred Eccc
Q 021952 161 DVYE 164 (305)
Q Consensus 161 d~~~ 164 (305)
|+++
T Consensus 194 d~~~ 197 (416)
T 2pm9_A 194 DLKA 197 (416)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 9987
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=38.03 E-value=2.2e+02 Score=25.40 Aligned_cols=113 Identities=8% Similarity=-0.053 Sum_probs=57.6
Q ss_pred eEEecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCccccee
Q 021952 78 ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDV 157 (305)
Q Consensus 78 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~ 157 (305)
+...+++.+++..+.. +...+||++++ +...+.. .+. .+.+...+++.++++...... ...+
T Consensus 116 ~~s~dg~~~~~~s~~~------~~~~l~d~~~g----~~~~l~~--~~~----~~~~~spDG~~la~~~~~~~~--~~~i 177 (582)
T 3o4h_A 116 SGVDTGEAVVFTGATE------DRVALYALDGG----GLRELAR--LPG----FGFVSDIRGDLIAGLGFFGGG--RVSL 177 (582)
T ss_dssp EEEECSSCEEEEEECS------SCEEEEEEETT----EEEEEEE--ESS----CEEEEEEETTEEEEEEEEETT--EEEE
T ss_pred eeCCCCCeEEEEecCC------CCceEEEccCC----cEEEeec--CCC----ceEEECCCCCEEEEEEEcCCC--CeEE
Confidence 3344444555555431 12347788886 6666552 111 334444456666665542211 2359
Q ss_pred EEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCC
Q 021952 158 WFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAI 224 (305)
Q Consensus 158 ~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~ 224 (305)
+.+|+.+ ++++.+. ..+ ......+ ..-+++.++.+..+. ...|+++|+.+.
T Consensus 178 ~~~d~~~--g~~~~l~--------~~~-~~~~~~~-~SpDG~~l~~~~~~~----~~~i~~~d~~~~ 228 (582)
T 3o4h_A 178 FTSNLSS--GGLRVFD--------SGE-GSFSSAS-ISPGMKVTAGLETAR----EARLVTVDPRDG 228 (582)
T ss_dssp EEEETTT--CCCEEEC--------CSS-CEEEEEE-ECTTSCEEEEEECSS----CEEEEEECTTTC
T ss_pred EEEcCCC--CCceEee--------cCC-Cccccce-ECCCCCEEEEccCCC----eeEEEEEcCCCC
Confidence 9999998 7787773 111 1112222 223555444333221 246889998754
No 159
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=36.96 E-value=1.7e+02 Score=23.69 Aligned_cols=159 Identities=13% Similarity=-0.021 Sum_probs=0.0
Q ss_pred eeEEEE-----CCEEEEEccccCCCCCcccceeecccccccccc-cceEEecccCCCCCCCCCCceeEEecC----CEEE
Q 021952 18 HTCVVI-----GDCLVLFGGINDRGNRHNDTWIGQIACHENLGI-TLSWRLLDVGSIAPPARGAHAACCIDN----RKMV 87 (305)
Q Consensus 18 ~~~~~~-----~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~-~~~W~~~~~~~~~p~~r~~~~~~~~~~----~~ly 87 (305)
.+++.. ++.+++.++... .+.++|+ . ......+...........-.+++...+ +.++
T Consensus 22 ~~i~~~p~~~~~~~~~~~~~~~~------~v~vw~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l 88 (366)
T 3k26_A 22 FGVQFNWHSKEGDPLVFATVGSN------RVTLYEC-------HSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLL 88 (366)
T ss_dssp EEEEECTTCCTTSCEEEEEEETT------EEEEEEE-------CGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEE
T ss_pred EEEEEecccCCCCceEEEECCCC------EEEEEEc-------CCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEE
Q ss_pred EEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEe-CCEEEEEcccCCCCcccceeEEEEccccc
Q 021952 88 IHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIG-GNRTVLFGGRGVGYEVLNDVWFLDVYEGF 166 (305)
Q Consensus 88 v~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~d~~~~~ 166 (305)
+.|+.+.. +.++|+.+. +-... -......-.++.... ++.+++.|+.+ ..+..+|+.+
T Consensus 89 ~~~~~dg~------i~v~d~~~~----~~~~~---~~~~~~~i~~~~~~~~~~~~l~s~~~d------g~i~iwd~~~-- 147 (366)
T 3k26_A 89 AVAGSRGI------IRIINPITM----QCIKH---YVGHGNAINELKFHPRDPNLLLSVSKD------HALRLWNIQT-- 147 (366)
T ss_dssp EEEETTCE------EEEECTTTC----CEEEE---EESCCSCEEEEEECSSCTTEEEEEETT------SCEEEEETTT--
T ss_pred EEecCCCE------EEEEEchhc----eEeee---ecCCCCcEEEEEECCCCCCEEEEEeCC------CeEEEEEeec--
Q ss_pred eeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 167 FKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 167 ~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
.+-... ..........-.+.....++..++.|+.+.. +.++|+.
T Consensus 148 ~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~------i~i~d~~ 191 (366)
T 3k26_A 148 DTLVAI------FGGVEGHRDEVLSADYDLLGEKIMSCGMDHS------LKLWRIN 191 (366)
T ss_dssp TEEEEE------ECSTTSCSSCEEEEEECTTSSEEEEEETTSC------EEEEESC
T ss_pred CeEEEE------ecccccccCceeEEEECCCCCEEEEecCCCC------EEEEECC
No 160
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=36.76 E-value=2e+02 Score=24.63 Aligned_cols=63 Identities=13% Similarity=0.214 Sum_probs=34.7
Q ss_pred CCceeEEecCCEEEEEec-cCCCCC-----ccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEc
Q 021952 74 GAHAACCIDNRKMVIHAG-IGLYGL-----RLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFG 145 (305)
Q Consensus 74 ~~~~~~~~~~~~lyv~GG-~~~~~~-----~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~G 145 (305)
..|++++..++.+|..|- ....+. ......-..+... ....++. .-..|+++...++.+|.+|
T Consensus 136 ~~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~---~~i~~va------~G~~hs~alt~~G~v~~wG 204 (423)
T 3mvd_K 136 DSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEG---TVCCSIA------SGADHLVILTTAGKVFTVG 204 (423)
T ss_dssp SSEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESSTT---CCEEEEE------ECSSEEEEEETTSCEEEEE
T ss_pred cCeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecCC---CcEEEEe------cCCCeEEEEecCCeEEEee
Confidence 478888887789999994 111111 0000000011111 1344443 2356888888888999998
No 161
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=36.65 E-value=1.7e+02 Score=23.83 Aligned_cols=93 Identities=16% Similarity=0.143 Sum_probs=47.4
Q ss_pred cEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCC
Q 021952 101 DTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIP 180 (305)
Q Consensus 101 ~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~ 180 (305)
.+.++|+.+. +-...-.+ . ...-.++....++.+++.|+.+ ..+..+|+.+ ..-...-
T Consensus 165 ~i~~wd~~~~----~~~~~~~~--h-~~~v~~~~~~~~~~~l~sg~~d------~~v~~wd~~~--~~~~~~~------- 222 (340)
T 1got_B 165 TCALWDIETG----QQTTTFTG--H-TGDVMSLSLAPDTRLFVSGACD------ASAKLWDVRE--GMCRQTF------- 222 (340)
T ss_dssp CEEEEETTTT----EEEEEECC--C-SSCEEEEEECTTSSEEEEEETT------SCEEEEETTT--CSEEEEE-------
T ss_pred cEEEEECCCC----cEEEEEcC--C-CCceEEEEECCCCCEEEEEeCC------CcEEEEECCC--CeeEEEE-------
Confidence 4788888775 32222111 0 0111233344456677777764 2488889887 4332221
Q ss_pred CCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 181 AGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 181 ~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
.... .. -.+.+...++.+++.|+.+. .+.++|+.+
T Consensus 223 ~~h~-~~-v~~v~~~p~~~~l~s~s~d~------~v~iwd~~~ 257 (340)
T 1got_B 223 TGHE-SD-INAICFFPNGNAFATGSDDA------TCRLFDLRA 257 (340)
T ss_dssp CCCS-SC-EEEEEECTTSSEEEEEETTS------CEEEEETTT
T ss_pred cCCc-CC-EEEEEEcCCCCEEEEEcCCC------cEEEEECCC
Confidence 0111 11 11222224567788887754 378888863
No 162
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=36.35 E-value=1.6e+02 Score=23.20 Aligned_cols=102 Identities=11% Similarity=0.090 Sum_probs=49.5
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
.++. ++.|+. + ..+.++|+.+. +-...-. ... ..-.+++...++. ++.|+.+ ..+..+|
T Consensus 194 ~~~~-~~~~~~--d----g~i~i~d~~~~----~~~~~~~-~~~--~~i~~~~~~~~~~-l~~~~~d------g~v~iwd 252 (313)
T 3odt_A 194 DDGH-FISCSN--D----GLIKLVDMHTG----DVLRTYE-GHE--SFVYCIKLLPNGD-IVSCGED------RTVRIWS 252 (313)
T ss_dssp ETTE-EEEEET--T----SEEEEEETTTC----CEEEEEE-CCS--SCEEEEEECTTSC-EEEEETT------SEEEEEC
T ss_pred CCCe-EEEccC--C----CeEEEEECCch----hhhhhhh-cCC--ceEEEEEEecCCC-EEEEecC------CEEEEEE
Confidence 4445 566654 2 34889998875 3222111 101 1112233333443 5556543 3588999
Q ss_pred ccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 162 VYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 162 ~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
+.+ .+....- ..+..... +.....+++ ++.|+.++ .+.++|+.
T Consensus 253 ~~~--~~~~~~~--------~~~~~~i~-~~~~~~~~~-~~~~~~dg------~i~iw~~~ 295 (313)
T 3odt_A 253 KEN--GSLKQVI--------TLPAISIW-SVDCMSNGD-IIVGSSDN------LVRIFSQE 295 (313)
T ss_dssp TTT--CCEEEEE--------ECSSSCEE-EEEECTTSC-EEEEETTS------CEEEEESC
T ss_pred CCC--CceeEEE--------eccCceEE-EEEEccCCC-EEEEeCCC------cEEEEeCC
Confidence 988 5433321 11111121 222223455 55676644 38889987
No 163
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=35.88 E-value=2e+02 Score=24.41 Aligned_cols=20 Identities=20% Similarity=0.262 Sum_probs=14.2
Q ss_pred CEEEEEeccCCCCCccCcEEEEecCC
Q 021952 198 GRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 198 ~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
..+++.|+.++ .|.+||+..
T Consensus 290 ~~~l~tg~~dg------~v~vwd~~~ 309 (430)
T 2xyi_A 290 EFILATGSADK------TVALWDLRN 309 (430)
T ss_dssp TTEEEEEETTS------EEEEEETTC
T ss_pred CCEEEEEeCCC------eEEEEeCCC
Confidence 34788887754 388889873
No 164
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=35.51 E-value=2.7e+02 Score=25.81 Aligned_cols=106 Identities=12% Similarity=-0.054 Sum_probs=53.2
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
.++..++.|+. + ..+.++|..++ +......+. ...-.+++...++..++.|+.+ ..+..+|
T Consensus 65 ~~~~~l~~~~~--d----g~i~vw~~~~~----~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~d------g~i~vw~ 125 (814)
T 3mkq_A 65 ARKNWIIVGSD--D----FRIRVFNYNTG----EKVVDFEAH---PDYIRSIAVHPTKPYVLSGSDD------LTVKLWN 125 (814)
T ss_dssp GGGTEEEEEET--T----SEEEEEETTTC----CEEEEEECC---SSCEEEEEECSSSSEEEEEETT------SEEEEEE
T ss_pred CCCCEEEEEeC--C----CeEEEEECCCC----cEEEEEecC---CCCEEEEEEeCCCCEEEEEcCC------CEEEEEE
Confidence 34466777764 2 35888998876 443322111 1111223333445566666643 2488888
Q ss_pred ccccce-eEEEeccccCCCCCCCCCCcceeEEEEEe-CCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 162 VYEGFF-KWVQIPYELQNIPAGFSLPRVGHSATLIL-GGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 162 ~~~~~~-~W~~~~~~~~~~~~~~p~~r~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
+.+ . ...... .....+ . .++.... ++.+++.|+.+. .+.++|+.+
T Consensus 126 ~~~--~~~~~~~~-------~~~~~~-v-~~~~~~p~~~~~l~~~~~dg------~v~vwd~~~ 172 (814)
T 3mkq_A 126 WEN--NWALEQTF-------EGHEHF-V-MCVAFNPKDPSTFASGCLDR------TVKVWSLGQ 172 (814)
T ss_dssp GGG--TSEEEEEE-------ECCSSC-E-EEEEEETTEEEEEEEEETTS------EEEEEETTC
T ss_pred CCC--CceEEEEE-------cCCCCc-E-EEEEEEcCCCCEEEEEeCCC------eEEEEECCC
Confidence 876 3 222221 111111 1 1222212 456777777654 488888763
No 165
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=35.24 E-value=1.8e+02 Score=23.66 Aligned_cols=186 Identities=7% Similarity=-0.012 Sum_probs=0.0
Q ss_pred ECCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCCccCcE
Q 021952 23 IGDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDT 102 (305)
Q Consensus 23 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 102 (305)
..+++++.|+... .+..+|+ .+.+-....... ......++....++.+++.|+.+.. +
T Consensus 137 ~~~~~l~s~s~dg------~i~~wd~-------~~~~~~~~~~~~---~~~~i~~~~~~pdg~~lasg~~dg~------i 194 (343)
T 3lrv_A 137 VNTEYFIWADNRG------TIGFQSY-------EDDSQYIVHSAK---SDVEYSSGVLHKDSLLLALYSPDGI------L 194 (343)
T ss_dssp --CCEEEEEETTC------CEEEEES-------SSSCEEEEECCC---SSCCCCEEEECTTSCEEEEECTTSC------E
T ss_pred CCCCEEEEEeCCC------cEEEEEC-------CCCcEEEEEecC---CCCceEEEEECCCCCEEEEEcCCCE------E
Q ss_pred EEEeccCCCCCcCeE-EcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCCC
Q 021952 103 WVLELSENFCFGSWQ-QLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPA 181 (305)
Q Consensus 103 ~~~d~~~~~~~~~W~-~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~ 181 (305)
.++|+++. +-. ..- .......-.++....++..++.|+.+. +..+|+++ ..-...- .
T Consensus 195 ~iwd~~~~----~~~~~~~--~~~h~~~v~~l~fs~~g~~l~s~~~~~-------v~iwd~~~--~~~~~~~-------~ 252 (343)
T 3lrv_A 195 DVYNLSSP----DQASSRF--PVDEEAKIKEVKFADNGYWMVVECDQT-------VVCFDLRK--DVGTLAY-------P 252 (343)
T ss_dssp EEEESSCT----TSCCEEC--CCCTTSCEEEEEECTTSSEEEEEESSB-------EEEEETTS--STTCBSS-------C
T ss_pred EEEECCCC----CCCccEE--eccCCCCEEEEEEeCCCCEEEEEeCCe-------EEEEEcCC--CCcceee-------c
Q ss_pred CCCCCcceeE---EEEEeCCEEEEEecc-CCCCCccCcEEEEecCCCCcccccccccccccccccccee--ecccCcCCC
Q 021952 182 GFSLPRVGHS---ATLILGGRVLIYGGE-DSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKR--LRAEGYKPN 255 (305)
Q Consensus 182 ~~p~~r~~~~---~~~~~~~~l~v~GG~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~--v~~~~~~p~ 255 (305)
.+........ .....++++++.|+. +.. +.+|+.... ...|+. +....-.+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~------i~v~~~~~~----------------~~~~~~~~~~~~~~~~~ 310 (343)
T 3lrv_A 253 TYTIPEFKTGTVTYDIDDSGKNMIAYSNESNS------LTIYKFDKK----------------TKNWTKDEESALCLQSD 310 (343)
T ss_dssp CCBC-----CCEEEEECTTSSEEEEEETTTTE------EEEEEECTT----------------TCSEEEEEEEECCC---
T ss_pred ccccccccccceEEEECCCCCEEEEecCCCCc------EEEEEEccc----------------ccceEecCceeEecCcc
Q ss_pred CCceeeeeeeCCCcEEEEE
Q 021952 256 CRSFHRACPDYSGRYLYVF 274 (305)
Q Consensus 256 ~r~~~~~~~~~~~~~i~v~ 274 (305)
..-....+....++.+.++
T Consensus 311 ~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 311 TADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp -CCCCEEEEEEETTEEEEE
T ss_pred ccccceeEEEecCCceEEE
No 166
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=35.00 E-value=2.7e+02 Score=25.62 Aligned_cols=99 Identities=17% Similarity=0.190 Sum_probs=53.1
Q ss_pred cCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccc-eeEEEeccccC
Q 021952 99 LGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGF-FKWVQIPYELQ 177 (305)
Q Consensus 99 ~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~-~~W~~~~~~~~ 177 (305)
.+++|++|..+. ++..+.... . .....+.. ++.+|+....+ .....++.+|+.++. ..|+.+.
T Consensus 251 ~~~l~~~~~~~~----~~~~l~~~~--~--~~~~~~~~-~g~l~~~s~~~---~~~~~l~~~d~~~~~~~~~~~l~---- 314 (695)
T 2bkl_A 251 ENDVYWKRPGEK----DFRLLVKGV--G--AKYEVHAW-KDRFYVLTDEG---APRQRVFEVDPAKPARASWKEIV---- 314 (695)
T ss_dssp EEEEEEECTTCS----SCEEEEECS--S--CCEEEEEE-TTEEEEEECTT---CTTCEEEEEBTTBCSGGGCEEEE----
T ss_pred ceEEEEEcCCCC----ceEEeecCC--C--ceEEEEec-CCcEEEEECCC---CCCCEEEEEeCCCCCccCCeEEe----
Confidence 567888887665 788776211 1 11122223 45555554321 223569999997721 2388873
Q ss_pred CCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 178 NIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 178 ~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
...+.... ..... .++.+++....+. ...+|++|+.
T Consensus 315 ---~~~~~~~l-~~~~~-~~~~lv~~~~~dg----~~~l~~~~~~ 350 (695)
T 2bkl_A 315 ---PEDSSASL-LSVSI-VGGHLSLEYLKDA----TSEVRVATLK 350 (695)
T ss_dssp ---CCCSSCEE-EEEEE-ETTEEEEEEEETT----EEEEEEEETT
T ss_pred ---cCCCCCeE-EEEEE-ECCEEEEEEEECC----EEEEEEEeCC
Confidence 11111111 22222 4788877776543 3458888864
No 167
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=34.46 E-value=1.8e+02 Score=23.38 Aligned_cols=61 Identities=16% Similarity=0.117 Sum_probs=33.0
Q ss_pred CCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEe---CCEEEEEeccCCCCCccC
Q 021952 138 GNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLIL---GGRVLIYGGEDSARRRKD 214 (305)
Q Consensus 138 ~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~---~~~l~v~GG~~~~~~~~~ 214 (305)
++.+++.|+.+ ..+..||+++ ..-.... .... .-.+..... ++..++.|+.+.
T Consensus 179 ~~~~l~~~~~d------~~i~i~d~~~--~~~~~~~--------~~~~--~v~~~~~~~~~~~~~~l~~~~~dg------ 234 (357)
T 3i2n_A 179 EERVVCAGYDN------GDIKLFDLRN--MALRWET--------NIKN--GVCSLEFDRKDISMNKLVATSLEG------ 234 (357)
T ss_dssp CCCEEEEEETT------SEEEEEETTT--TEEEEEE--------ECSS--CEEEEEESCSSSSCCEEEEEESTT------
T ss_pred CCCEEEEEccC------CeEEEEECcc--Cceeeec--------CCCC--ceEEEEcCCCCCCCCEEEEECCCC------
Confidence 45677777653 3588999988 4332221 1111 112222212 567777776643
Q ss_pred cEEEEecC
Q 021952 215 DFWVLDTK 222 (305)
Q Consensus 215 ~~~~~d~~ 222 (305)
.+.+||+.
T Consensus 235 ~i~i~d~~ 242 (357)
T 3i2n_A 235 KFHVFDMR 242 (357)
T ss_dssp EEEEEEEE
T ss_pred eEEEEeCc
Confidence 47778876
No 168
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=34.45 E-value=1.7e+02 Score=23.15 Aligned_cols=67 Identities=10% Similarity=0.044 Sum_probs=35.0
Q ss_pred eCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEe---CCEEEEEeccCCCCCcc
Q 021952 137 GGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLIL---GGRVLIYGGEDSARRRK 213 (305)
Q Consensus 137 ~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~---~~~l~v~GG~~~~~~~~ 213 (305)
.++.+++.|+.+ ..+..+|+.++...++.+. .+......-.++... ++.+++.|+.+.
T Consensus 21 ~~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~--------~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg----- 81 (351)
T 3f3f_A 21 FYGRHVATCSSD------QHIKVFKLDKDTSNWELSD--------SWRAHDSSIVAIDWASPEYGRIIASASYDK----- 81 (351)
T ss_dssp SSSSEEEEEETT------SEEEEEEECSSSCCEEEEE--------EEECCSSCEEEEEECCGGGCSEEEEEETTS-----
T ss_pred CCCCEEEEeeCC------CeEEEEECCCCCCcceecc--------eeccCCCcEEEEEEcCCCCCCEEEEEcCCC-----
Confidence 345566666653 2477778775324444432 111111112222223 367888888754
Q ss_pred CcEEEEecCC
Q 021952 214 DDFWVLDTKA 223 (305)
Q Consensus 214 ~~~~~~d~~~ 223 (305)
.+.++|+.+
T Consensus 82 -~v~vwd~~~ 90 (351)
T 3f3f_A 82 -TVKLWEEDP 90 (351)
T ss_dssp -CEEEEEECT
T ss_pred -eEEEEecCC
Confidence 377788764
No 169
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=33.63 E-value=2.2e+02 Score=24.06 Aligned_cols=21 Identities=24% Similarity=0.175 Sum_probs=12.1
Q ss_pred CCEEEEEcccCCCCcccceeEEEEccc
Q 021952 138 GNRTVLFGGRGVGYEVLNDVWFLDVYE 164 (305)
Q Consensus 138 ~~~i~v~GG~~~~~~~~~~~~~~d~~~ 164 (305)
++..++.|+.+ +.+..+|..+
T Consensus 241 ~g~~l~s~~~D------~~v~i~~~~~ 261 (420)
T 4gga_A 241 DGRHLASGGND------NLVNVWPSAP 261 (420)
T ss_dssp TSSEEEEEETT------SCEEEEESSC
T ss_pred CCCeeeeeecc------ccceEEeecc
Confidence 34556666543 2366777765
No 170
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=33.16 E-value=2.6e+02 Score=24.74 Aligned_cols=154 Identities=12% Similarity=0.016 Sum_probs=0.0
Q ss_pred eeEEecCCEEEEEecc-CCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccc
Q 021952 77 AACCIDNRKMVIHAGI-GLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLN 155 (305)
Q Consensus 77 ~~~~~~~~~lyv~GG~-~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~ 155 (305)
.++.+. +++++.|+. +.. +.++|+.+. +..... .......-.+++...++++++.|+.+ .
T Consensus 450 ~~~~~~-~~~l~~~~~~d~~------i~~~~~~~~----~~~~~~--~~~~~~~v~~~~~s~~g~~l~~~~~d------g 510 (615)
T 1pgu_A 450 SAVSLS-QNYVAVGLEEGNT------IQVFKLSDL----EVSFDL--KTPLRAKPSYISISPSETYIAAGDVM------G 510 (615)
T ss_dssp EEEEEC-SSEEEEEETTTSC------EEEEETTEE----EEEEEC--SSCCSSCEEEEEECTTSSEEEEEETT------S
T ss_pred eEEEEc-CCEEEEeecCCCe------EEEEECCCc----cccccc--cCCccCceEEEEECCCCCEEEEcCCC------C
Q ss_pred eeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEe----------CCEEEEEeccCCCCCccCcEEEEecCCCC
Q 021952 156 DVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLIL----------GGRVLIYGGEDSARRRKDDFWVLDTKAIP 225 (305)
Q Consensus 156 ~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~----------~~~l~v~GG~~~~~~~~~~~~~~d~~~~~ 225 (305)
.+..||+.+ .+-... -.......-.++.... ++.+++.|+.+.. +.++|+.
T Consensus 511 ~i~iw~~~~--~~~~~~--------~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~------i~iw~~~--- 571 (615)
T 1pgu_A 511 KILLYDLQS--REVKTS--------RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTN------IFIYSVK--- 571 (615)
T ss_dssp CEEEEETTT--TEEEEC--------CSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSC------EEEEESS---
T ss_pred eEEEeeCCC--CcceeE--------eecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCc------EEEEECC---
Q ss_pred ccccccccccccccccccceeecccCcCCCCCceeeeeeeCCCcEEEEEcCccCCCcccCCCccccccCceeeEeeee
Q 021952 226 FTSVQQSMLDSRGLLLNMWKRLRAEGYKPNCRSFHRACPDYSGRYLYVFGGMVDGLVQPADTSGLRFDGRLLLVELVP 303 (305)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~d~~~~~~~~ 303 (305)
+.. +.+.. ...-...-.++.+..++. ++.||. +..+..+++..
T Consensus 572 ---------------~~~-~~~~~---~~~h~~~v~~l~~s~~~~-l~s~~~---------------d~~v~iw~~~~ 614 (615)
T 1pgu_A 572 ---------------RPM-KIIKA---LNAHKDGVNNLLWETPST-LVSSGA---------------DACIKRWNVVL 614 (615)
T ss_dssp ---------------CTT-CCEEE---TTSSTTCEEEEEEEETTE-EEEEET---------------TSCEEEEEEC-
T ss_pred ---------------CCc-eechh---hhcCccceEEEEEcCCCC-eEEecC---------------CceEEEEeeec
No 171
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=32.52 E-value=2.1e+02 Score=23.56 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=51.6
Q ss_pred EEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccc
Q 021952 85 KMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYE 164 (305)
Q Consensus 85 ~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~ 164 (305)
.+++.|+.+ ..+.++|+.+. +....-. ... ..-.+++...++..++.|+.+ ..+..+|+.+
T Consensus 211 ~~l~sgs~D------g~v~~wd~~~~----~~~~~~~--~h~-~~v~~v~~~p~~~~l~s~s~D------~~v~lwd~~~ 271 (354)
T 2pbi_B 211 NTFVSGGCD------KKAMVWDMRSG----QCVQAFE--THE-SDVNSVRYYPSGDAFASGSDD------ATCRLYDLRA 271 (354)
T ss_dssp CEEEEEETT------SCEEEEETTTC----CEEEEEC--CCS-SCEEEEEECTTSSEEEEEETT------SCEEEEETTT
T ss_pred CEEEEEeCC------CeEEEEECCCC----cEEEEec--CCC-CCeEEEEEeCCCCEEEEEeCC------CeEEEEECCC
Confidence 466666642 24788888876 4333221 100 111122333345677777764 2488899887
Q ss_pred cceeEEEeccccCCCCCCCCCCcceeEEEEE-eCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 165 GFFKWVQIPYELQNIPAGFSLPRVGHSATLI-LGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 165 ~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
..-..+. ...........+.+ .++.+++.|+.+. .+.++|+.
T Consensus 272 --~~~~~~~--------~~~~~~~~~~~~~~s~~g~~l~~g~~d~------~i~vwd~~ 314 (354)
T 2pbi_B 272 --DREVAIY--------SKESIIFGASSVDFSLSGRLLFAGYNDY------TINVWDVL 314 (354)
T ss_dssp --TEEEEEE--------CCTTCCSCEEEEEECTTSSEEEEEETTS------CEEEEETT
T ss_pred --CcEEEEE--------cCCCcccceeEEEEeCCCCEEEEEECCC------cEEEEECC
Confidence 4322221 11111112222222 4567777777653 38888976
No 172
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=31.77 E-value=2.4e+02 Score=24.04 Aligned_cols=22 Identities=9% Similarity=0.194 Sum_probs=14.3
Q ss_pred CCEEEEEeccCCCCCccCcEEEEeccCC
Q 021952 83 NRKMVIHAGIGLYGLRLGDTWVLELSEN 110 (305)
Q Consensus 83 ~~~lyv~GG~~~~~~~~~~~~~~d~~~~ 110 (305)
++++++.|+. + ..+.++|+.+.
T Consensus 251 d~~~l~s~~~--d----~~v~vwd~~~~ 272 (450)
T 2vdu_B 251 KDYLLLSAGG--D----DKIFAWDWKTG 272 (450)
T ss_dssp STTEEEEEES--S----SEEEEEETTTC
T ss_pred CCCEEEEEeC--C----CeEEEEECCCC
Confidence 3356667764 2 35888888876
No 173
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=31.45 E-value=2.1e+02 Score=23.28 Aligned_cols=64 Identities=11% Similarity=0.085 Sum_probs=40.0
Q ss_pred CEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEcc
Q 021952 84 RKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVY 163 (305)
Q Consensus 84 ~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~ 163 (305)
+.+|+++.. -..++++|++++ +...+.. + ..-.+++...++++++... +.++++|+.
T Consensus 61 ~~l~~~d~~------~~~i~~~d~~~~----~~~~~~~---~--~~v~~i~~~~dg~l~v~~~--------~gl~~~d~~ 117 (326)
T 2ghs_A 61 GTAWWFNIL------ERELHELHLASG----RKTVHAL---P--FMGSALAKISDSKQLIASD--------DGLFLRDTA 117 (326)
T ss_dssp TEEEEEEGG------GTEEEEEETTTT----EEEEEEC---S--SCEEEEEEEETTEEEEEET--------TEEEEEETT
T ss_pred CEEEEEECC------CCEEEEEECCCC----cEEEEEC---C--CcceEEEEeCCCeEEEEEC--------CCEEEEECC
Confidence 578887643 235899999886 5544431 1 1223444555678777541 249999998
Q ss_pred ccceeEEEe
Q 021952 164 EGFFKWVQI 172 (305)
Q Consensus 164 ~~~~~W~~~ 172 (305)
+ ++.+.+
T Consensus 118 ~--g~~~~~ 124 (326)
T 2ghs_A 118 T--GVLTLH 124 (326)
T ss_dssp T--CCEEEE
T ss_pred C--CcEEEE
Confidence 8 777665
No 174
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=31.29 E-value=2.4e+02 Score=23.93 Aligned_cols=102 Identities=13% Similarity=0.172 Sum_probs=51.5
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
.++..++.|+.+ ..+.++|+.+. +-...-. . . .......... +..++.|+.+ ..+..+|
T Consensus 320 ~~~~~l~sg~~d------g~i~vwd~~~~----~~~~~~~-~-h--~~~v~~~~~~-~~~l~s~s~d------g~v~vwd 378 (464)
T 3v7d_B 320 HERKRCISASMD------TTIRIWDLENG----ELMYTLQ-G-H--TALVGLLRLS-DKFLVSAAAD------GSIRGWD 378 (464)
T ss_dssp TTTTEEEEEETT------SCEEEEETTTT----EEEEEEC-C-C--SSCEEEEEEC-SSEEEEEETT------SEEEEEE
T ss_pred CCCCEEEEEeCC------CcEEEEECCCC----cEEEEEe-C-C--CCcEEEEEEc-CCEEEEEeCC------CcEEEEE
Confidence 334566666642 34889999875 3222111 1 1 1112233343 4566666653 2488899
Q ss_pred ccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 162 VYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 162 ~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
+.+....+... .. ... ...+...++.+++.|+ ++ .+.++|+.+
T Consensus 379 ~~~~~~~~~~~--------~~---~~~-~~~~~~~~~~~l~~~~-dg------~i~iwd~~~ 421 (464)
T 3v7d_B 379 ANDYSRKFSYH--------HT---NLS-AITTFYVSDNILVSGS-EN------QFNIYNLRS 421 (464)
T ss_dssp TTTCCEEEEEE--------CT---TCC-CEEEEEECSSEEEEEE-TT------EEEEEETTT
T ss_pred CCCCceeeeec--------CC---CCc-cEEEEEeCCCEEEEec-CC------eEEEEECCC
Confidence 98722222221 11 111 2222335667777776 32 488999873
No 175
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=30.77 E-value=3.2e+02 Score=25.13 Aligned_cols=92 Identities=13% Similarity=0.054 Sum_probs=52.7
Q ss_pred CCCCCCCceeEEe-----cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEE---eCCE
Q 021952 69 APPARGAHAACCI-----DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRI---GGNR 140 (305)
Q Consensus 69 ~p~~r~~~~~~~~-----~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~---~~~~ 140 (305)
.+..-..|-.... +++++|+.-. ..+.+.++|+++. +-.++- ..|....-|.++.. ..+.
T Consensus 82 ~~~gd~hh~~~s~t~g~~DG~~lfVnd~------~~~rVavIdl~t~----~~~~ii--~ip~g~~phg~~~~~~p~~~~ 149 (595)
T 1fwx_A 82 HDNGDLHHVHMSFTEGKYDGRFLFMNDK------ANTRVARVRCDVM----KCDAIL--EIPNAKGIHGLRPQKWPRSNY 149 (595)
T ss_dssp CCCCCBCCEEEEEETTEEEEEEEEEEET------TTTEEEEEETTTT----EEEEEE--ECSSCCSEEEEEECCSSBCSE
T ss_pred cccCCCCccccCCCCCCcCCCEEEEEcC------CCCEEEEEECCCc----eEeeEE--eCCCCCCCcceeeeecCCCcE
Confidence 4445555655554 4457777322 2457999999986 655543 34444455666653 2345
Q ss_pred EEEEccc-----------CCCCcccceeEEEEccccceeEEEe
Q 021952 141 TVLFGGR-----------GVGYEVLNDVWFLDVYEGFFKWVQI 172 (305)
Q Consensus 141 i~v~GG~-----------~~~~~~~~~~~~~d~~~~~~~W~~~ 172 (305)
+|+.+-+ ......-+.+-++|.++....|+-.
T Consensus 150 v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~ 192 (595)
T 1fwx_A 150 VFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVL 192 (595)
T ss_dssp EEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEE
T ss_pred EEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEE
Confidence 6665422 1113345578899998855567654
No 176
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=30.71 E-value=2.4e+02 Score=23.74 Aligned_cols=105 Identities=16% Similarity=0.151 Sum_probs=50.3
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
.++.+++.|+.+ ..+.++|+.++ +-.... .....+ ..+... ++.+++.|+.. ..+..+|
T Consensus 157 pdg~~lasgs~D------g~v~iWd~~~~----~~~~~~--~~h~~~--v~~~s~-~~~~l~sgs~d------~~i~~~d 215 (420)
T 4gga_A 157 KEGNYLAVGTSS------AEVQLWDVQQQ----KRLRNM--TSHSAR--VGSLSW-NSYILSSGSRS------GHIHHHD 215 (420)
T ss_dssp TTSSEEEEEETT------SCEEEEETTTT----EEEEEE--CCCSSC--EEEEEE-ETTEEEEEETT------SEEEEEE
T ss_pred CCCCEEEEEECC------CeEEEEEcCCC----cEEEEE--eCCCCc--eEEEee-CCCEEEEEeCC------CceeEee
Confidence 344677777752 24888898876 322221 111111 122333 35566666653 2467777
Q ss_pred ccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 162 VYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 162 ~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
.......-..+. ..... . .......++..++.|+.+. .+.++|..+
T Consensus 216 ~~~~~~~~~~~~--------~h~~~-~-~~~~~~~~g~~l~s~~~D~------~v~i~~~~~ 261 (420)
T 4gga_A 216 VRVAEHHVATLS--------GHSQE-V-CGLRWAPDGRHLASGGNDN------LVNVWPSAP 261 (420)
T ss_dssp TTSSSCEEEEEE--------CCSSC-E-EEEEECTTSSEEEEEETTS------CEEEEESSC
T ss_pred ecccceeeEEec--------ccccc-e-eeeeecCCCCeeeeeeccc------cceEEeecc
Confidence 765212222221 11111 1 1122224566777777654 367777663
No 177
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=30.36 E-value=2.1e+02 Score=22.82 Aligned_cols=22 Identities=23% Similarity=0.276 Sum_probs=15.1
Q ss_pred eCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 196 LGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 196 ~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
.++.+++.|+.++. |.++|+++
T Consensus 316 ~dg~~l~sgs~Dg~------v~iW~~~t 337 (340)
T 4aow_A 316 ADGQTLFAGYTDNL------VRVWQVTI 337 (340)
T ss_dssp TTSSEEEEEETTSC------EEEEEEEC
T ss_pred CCCCEEEEEeCCCE------EEEEeCCC
Confidence 45677888887643 77788763
No 178
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=28.88 E-value=3e+02 Score=24.29 Aligned_cols=58 Identities=10% Similarity=0.083 Sum_probs=33.8
Q ss_pred CCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCCccCcEE
Q 021952 24 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTW 103 (305)
Q Consensus 24 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 103 (305)
++++|+|-|. ..|+||. .+.+.....-.+ .| . .-++.... +++|+|-|. ..|
T Consensus 158 ~~~~yfFkG~--------~yw~yd~-------~~~~~~~~~w~g-i~--~-iDAA~~~~-g~~YfFkG~--------~y~ 209 (460)
T 1qhu_A 158 DEGILFFQGN--------RKWFWDL-------TTGTKKERSWPA-VG--N-CTSALRWL-GRYYCFQGN--------QFL 209 (460)
T ss_dssp SSEEEEEETT--------EEEEEET-------TTTEEEEECCTT-SC--C-CSEEEEET-TEEEEEETT--------EEE
T ss_pred CCeEEEEecc--------cEEEEec-------ccceeecccCCC-CC--c-cchheeeC-CceEEEECC--------EEE
Confidence 6778888762 4688998 454444322222 22 2 23444445 489999884 256
Q ss_pred EEeccC
Q 021952 104 VLELSE 109 (305)
Q Consensus 104 ~~d~~~ 109 (305)
+||..+
T Consensus 210 rfd~~~ 215 (460)
T 1qhu_A 210 RFNPVS 215 (460)
T ss_dssp EECTTT
T ss_pred EEcCcc
Confidence 777654
No 179
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=28.77 E-value=2.5e+02 Score=23.30 Aligned_cols=106 Identities=17% Similarity=0.048 Sum_probs=53.1
Q ss_pred CEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCE-EEEEcccCCCCcccceeEEEEc
Q 021952 84 RKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNR-TVLFGGRGVGYEVLNDVWFLDV 162 (305)
Q Consensus 84 ~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~-i~v~GG~~~~~~~~~~~~~~d~ 162 (305)
+++++.|+. + ..+.++|+.+. +-.... .......-.+++...++. +++.|+.+ ..+..+|+
T Consensus 259 ~~~l~~~~~--d----g~i~i~d~~~~----~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~g~~d------g~i~vwd~ 320 (420)
T 3vl1_A 259 GKYVIAGHV--S----GVITVHNVFSK----EQTIQL--PSKFTCSCNSLTVDGNNANYIYAGYEN------GMLAQWDL 320 (420)
T ss_dssp TEEEEEEET--T----SCEEEEETTTC----CEEEEE--CCTTSSCEEEEEECSSCTTEEEEEETT------SEEEEEET
T ss_pred CCEEEEEcC--C----CeEEEEECCCC----ceeEEc--ccccCCCceeEEEeCCCCCEEEEEeCC------CeEEEEEc
Confidence 466677664 2 24889999875 322111 111111112333333444 67777653 35889999
Q ss_pred cccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCC
Q 021952 163 YEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKA 223 (305)
Q Consensus 163 ~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~ 223 (305)
.++...-..+. ... ... ..++...++.+++.|+.+. .+.++|+..
T Consensus 321 ~~~~~~~~~~~-------~~~--~~~-v~~~~~~~~~~l~s~~~d~------~v~iw~~~~ 365 (420)
T 3vl1_A 321 RSPECPVGEFL-------INE--GTP-INNVYFAAGALFVSSGFDT------SIKLDIISD 365 (420)
T ss_dssp TCTTSCSEEEE-------EST--TSC-EEEEEEETTEEEEEETTTE------EEEEEEECC
T ss_pred CCCcCchhhhh-------ccC--CCC-ceEEEeCCCCEEEEecCCc------cEEEEeccC
Confidence 87212122221 001 111 1222335788888888754 367777663
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=28.12 E-value=2.2e+02 Score=22.44 Aligned_cols=91 Identities=11% Similarity=0.017 Sum_probs=45.4
Q ss_pred CcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEcc-ccceeE-EEeccccC
Q 021952 100 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVY-EGFFKW-VQIPYELQ 177 (305)
Q Consensus 100 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~-~~~~~W-~~~~~~~~ 177 (305)
..++.+|.+ + +...+.. ... ....++...++++++..... +.+++||+. + ++. ......
T Consensus 153 ~~l~~~~~~-g----~~~~~~~-~~~---~~~gi~~s~dg~~lv~~~~~------~~i~~~~~~~~--g~~~~~~~~~-- 213 (296)
T 3e5z_A 153 RWVFRLAPD-G----TLSAPIR-DRV---KPNGLAFLPSGNLLVSDTGD------NATHRYCLNAR--GETEYQGVHF-- 213 (296)
T ss_dssp CEEEEECTT-S----CEEEEEC-CCS---SEEEEEECTTSCEEEEETTT------TEEEEEEECSS--SCEEEEEEEE--
T ss_pred cEEEEECCC-C----CEEEeec-CCC---CCccEEECCCCCEEEEeCCC------CeEEEEEECCC--CcCcCCCeEe--
Confidence 478999887 4 5554431 111 11234444456666444321 468999986 4 444 221100
Q ss_pred CCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 178 NIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 178 ~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
......| + ..+...++.||+.. . +.|.+||+.
T Consensus 214 ~~~~~~p--~---~i~~d~~G~l~v~~--~------~~v~~~~~~ 245 (296)
T 3e5z_A 214 TVEPGKT--D---GLRVDAGGLIWASA--G------DGVHVLTPD 245 (296)
T ss_dssp CCSSSCC--C---SEEEBTTSCEEEEE--T------TEEEEECTT
T ss_pred eCCCCCC--C---eEEECCCCCEEEEc--C------CeEEEECCC
Confidence 0011111 1 23333567888877 1 248899976
No 181
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=27.97 E-value=1.5e+02 Score=25.46 Aligned_cols=68 Identities=12% Similarity=0.029 Sum_probs=38.2
Q ss_pred CCEEEEEc---ccCCCCcccceeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCC--EEEEEeccCCCCCc
Q 021952 138 GNRTVLFG---GRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGG--RVLIYGGEDSARRR 212 (305)
Q Consensus 138 ~~~i~v~G---G~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~--~l~v~GG~~~~~~~ 212 (305)
.+++|+.- +........+.++++|+.+ ++-.+- ++.+..-.+..+.-++ .||+.-+.
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t--~kv~~~----------i~vg~~~~~lavs~D~~~~ly~tn~~------ 352 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKT--GERLAK----------FEMGHEIDSINVSQDEKPLLYALSTG------ 352 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTT--CCEEEE----------EEEEEEECEEEECSSSSCEEEEEETT------
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCC--CeEEEE----------EECCCCcceEEECCCCCeEEEEEcCC------
Confidence 56888863 2333444568899999998 543222 2222222223332343 46665443
Q ss_pred cCcEEEEecCC
Q 021952 213 KDDFWVLDTKA 223 (305)
Q Consensus 213 ~~~~~~~d~~~ 223 (305)
.++|.+||..+
T Consensus 353 ~~~VsViD~~t 363 (386)
T 3sjl_D 353 DKTLYIHDAES 363 (386)
T ss_dssp TTEEEEEETTT
T ss_pred CCeEEEEECCC
Confidence 34699999883
No 182
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=27.61 E-value=3.6e+02 Score=24.67 Aligned_cols=77 Identities=19% Similarity=0.245 Sum_probs=40.4
Q ss_pred EEEEEcccCCCCcccceeEEEEccc---cceeEEEeccccCCCCCCCCCCcceeEEEEEe-CCEEEEEe-ccCCCCCccC
Q 021952 140 RTVLFGGRGVGYEVLNDVWFLDVYE---GFFKWVQIPYELQNIPAGFSLPRVGHSATLIL-GGRVLIYG-GEDSARRRKD 214 (305)
Q Consensus 140 ~i~v~GG~~~~~~~~~~~~~~d~~~---~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~-~~~l~v~G-G~~~~~~~~~ 214 (305)
+.+++||..... ..++.+|+.+ ....|+.-... ...+-.-......+.+. +.-+.|+| |++. .....
T Consensus 152 rtvLvggmg~GG---~~~yALDVT~P~~p~~LWe~~~~~----~~~LG~t~s~P~I~~~~~g~w~~vfG~GY~~-~~~~~ 223 (570)
T 3hx6_A 152 HTVLIGSLRAGG---KGLFALDVTDPANIKLLWEIGVDQ----EPDLGYSFPKPTVARLHNGKWAVVTGNGYSS-MNDKA 223 (570)
T ss_dssp EEEEEEECTTSC---SEEEEEECSSGGGCEEEEEEETTT----CTTCCBCCSCCEEEECTTSSEEEEEECCBSC-TTCCE
T ss_pred eEEEEEecCCCC---cEEEEEECCCCCCCceeEEECCCC----ccccCccccCCEEEEecCCCEEEEEccccCC-CCCcc
Confidence 567888764333 3588888765 34678765210 11121111111222222 34466666 4443 23356
Q ss_pred cEEEEecCCC
Q 021952 215 DFWVLDTKAI 224 (305)
Q Consensus 215 ~~~~~d~~~~ 224 (305)
.||++|+++.
T Consensus 224 ~Lyv~d~~tG 233 (570)
T 3hx6_A 224 ALLIIDMETG 233 (570)
T ss_dssp EEEEEETTTC
T ss_pred EEEEEECCCC
Confidence 7999999865
No 183
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=27.57 E-value=3.5e+02 Score=24.63 Aligned_cols=104 Identities=16% Similarity=0.106 Sum_probs=49.9
Q ss_pred cCcEEEEeccCCCCCcCeEEcccCCCCCcc-CCCeeEEEe--CCEEEEEcccCCCCcccceeEEEEccccceeEEEeccc
Q 021952 99 LGDTWVLELSENFCFGSWQQLVTHPSPPAR-SGHSLTRIG--GNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYE 175 (305)
Q Consensus 99 ~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r-~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~ 175 (305)
...++++|+.+. -+...+......... ....++... ++++++.+..+ -...+|.+|... .....+.
T Consensus 283 ~~~v~~~d~~~g---~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~----g~~~l~~~~~~~--~~~~~l~-- 351 (706)
T 2z3z_A 283 ECKVNAYDAETG---RFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRD----GWNHLYLYDTTG--RLIRQVT-- 351 (706)
T ss_dssp EEEEEEEETTTC---CEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTT----SSCEEEEEETTS--CEEEECC--
T ss_pred eeEEEEEECCCC---ceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccC----CccEEEEEECCC--CEEEecC--
Confidence 457899998874 123333210111000 012234444 56766655432 135688888766 6677763
Q ss_pred cCCCCCCCCCCcceeEEEEEeCC-EEEEEeccCCCCCccCcEEEEecC
Q 021952 176 LQNIPAGFSLPRVGHSATLILGG-RVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 176 ~~~~~~~~p~~r~~~~~~~~~~~-~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
......... .....++ .|++.+..+. .....+|.+|..
T Consensus 352 ------~~~~~v~~~-~~~spdg~~l~~~~~~~~--~~~~~l~~~d~~ 390 (706)
T 2z3z_A 352 ------KGEWEVTNF-AGFDPKGTRLYFESTEAS--PLERHFYCIDIK 390 (706)
T ss_dssp ------CSSSCEEEE-EEECTTSSEEEEEESSSC--TTCBEEEEEETT
T ss_pred ------CCCeEEEee-eEEcCCCCEEEEEecCCC--CceEEEEEEEcC
Confidence 111111111 1121334 4555554322 123468999987
No 184
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=27.18 E-value=77 Score=27.38 Aligned_cols=71 Identities=6% Similarity=-0.110 Sum_probs=40.5
Q ss_pred cCCEEEEEecc---CCCCCccCcEEEEeccCCCCCcCe-EEcccCCCCCccCCCeeEEEeCC--EEEEEcccCCCCcccc
Q 021952 82 DNRKMVIHAGI---GLYGLRLGDTWVLELSENFCFGSW-QQLVTHPSPPARSGHSLTRIGGN--RTVLFGGRGVGYEVLN 155 (305)
Q Consensus 82 ~~~~lyv~GG~---~~~~~~~~~~~~~d~~~~~~~~~W-~~~~~~~~p~~r~~~~~~~~~~~--~i~v~GG~~~~~~~~~ 155 (305)
+.+++|+.-+. +.....-++++++|+.+. +- ..++. +....++.+..++ .+|+.-+. .+
T Consensus 290 ~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~----kv~~~i~v-----g~~~~~lavs~D~~~~ly~tn~~------~~ 354 (386)
T 3sjl_D 290 ALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG----ERLAKFEM-----GHEIDSINVSQDEKPLLYALSTG------DK 354 (386)
T ss_dssp TTTEEEEEEEECCTTCTTSCEEEEEEEETTTC----CEEEEEEE-----EEEECEEEECSSSSCEEEEEETT------TT
T ss_pred CCCeEEEEeccccccccCCCCCEEEEEECCCC----eEEEEEEC-----CCCcceEEECCCCCeEEEEEcCC------CC
Confidence 45689996432 222234578999999987 43 23322 2222344444344 46664332 25
Q ss_pred eeEEEEccccceeE
Q 021952 156 DVWFLDVYEGFFKW 169 (305)
Q Consensus 156 ~~~~~d~~~~~~~W 169 (305)
++.++|..+ ++-
T Consensus 355 ~VsViD~~t--~k~ 366 (386)
T 3sjl_D 355 TLYIHDAES--GEE 366 (386)
T ss_dssp EEEEEETTT--CCE
T ss_pred eEEEEECCC--CcE
Confidence 799999988 543
No 185
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=26.62 E-value=2.7e+02 Score=22.89 Aligned_cols=61 Identities=20% Similarity=0.245 Sum_probs=34.1
Q ss_pred CEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEE
Q 021952 139 NRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWV 218 (305)
Q Consensus 139 ~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~ 218 (305)
+..++.|+.+ ..+..+|+++ .+....- .... ... .+.....++.+++.|+.+. .+.+
T Consensus 210 g~~l~sgs~D------g~v~~wd~~~--~~~~~~~-------~~h~-~~v-~~v~~~p~~~~l~s~s~D~------~v~l 266 (354)
T 2pbi_B 210 GNTFVSGGCD------KKAMVWDMRS--GQCVQAF-------ETHE-SDV-NSVRYYPSGDAFASGSDDA------TCRL 266 (354)
T ss_dssp CCEEEEEETT------SCEEEEETTT--CCEEEEE-------CCCS-SCE-EEEEECTTSSEEEEEETTS------CEEE
T ss_pred CCEEEEEeCC------CeEEEEECCC--CcEEEEe-------cCCC-CCe-EEEEEeCCCCEEEEEeCCC------eEEE
Confidence 4577777764 2488999988 5543321 0111 111 1122223567788887754 3788
Q ss_pred EecC
Q 021952 219 LDTK 222 (305)
Q Consensus 219 ~d~~ 222 (305)
+|+.
T Consensus 267 wd~~ 270 (354)
T 2pbi_B 267 YDLR 270 (354)
T ss_dssp EETT
T ss_pred EECC
Confidence 8876
No 186
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=25.11 E-value=2.5e+02 Score=23.32 Aligned_cols=70 Identities=14% Similarity=0.219 Sum_probs=39.1
Q ss_pred eEEecCCEEEEEecc-CCC---CCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCC-EEEEEcccCCCCc
Q 021952 78 ACCIDNRKMVIHAGI-GLY---GLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGN-RTVLFGGRGVGYE 152 (305)
Q Consensus 78 ~~~~~~~~lyv~GG~-~~~---~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~-~i~v~GG~~~~~~ 152 (305)
++.-+++++|+.... +.. ....+.++++|+++. + .+. ..+.+. .++++...++ .+|+.++
T Consensus 260 a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~----~--~v~--~i~~~~-p~~ia~spdg~~l~v~n~------ 324 (361)
T 2oiz_A 260 GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK----Q--RVA--RIPGRD-ALSMTIDQQRNLMLTLDG------ 324 (361)
T ss_dssp EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT----E--EEE--EEECTT-CCEEEEETTTTEEEEECS------
T ss_pred EEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC----c--EEE--EEecCC-eeEEEECCCCCEEEEeCC------
Confidence 333344689987541 111 113468999999886 3 332 111122 4455555444 5555432
Q ss_pred ccceeEEEEccc
Q 021952 153 VLNDVWFLDVYE 164 (305)
Q Consensus 153 ~~~~~~~~d~~~ 164 (305)
+.+.++|.++
T Consensus 325 --~~v~v~D~~t 334 (361)
T 2oiz_A 325 --GNVNVYDISQ 334 (361)
T ss_dssp --SCEEEEECSS
T ss_pred --CeEEEEECCC
Confidence 5799999988
No 187
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=25.09 E-value=2.5e+02 Score=22.09 Aligned_cols=21 Identities=14% Similarity=-0.016 Sum_probs=13.7
Q ss_pred CEEEEEeccCCCCCccCcEEEEeccCC
Q 021952 84 RKMVIHAGIGLYGLRLGDTWVLELSEN 110 (305)
Q Consensus 84 ~~lyv~GG~~~~~~~~~~~~~~d~~~~ 110 (305)
+.+++.|+. + ..+.++|+.+.
T Consensus 124 ~~~l~~~~~--d----g~v~iwd~~~~ 144 (351)
T 3f3f_A 124 GLKLACLGN--D----GILRLYDALEP 144 (351)
T ss_dssp CSEEEEEET--T----CEEEEEECSST
T ss_pred CcEEEEecC--C----CcEEEecCCCh
Confidence 356677664 2 24788888775
No 188
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=24.90 E-value=3.1e+02 Score=23.06 Aligned_cols=159 Identities=14% Similarity=0.108 Sum_probs=76.1
Q ss_pred eeEEecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCC-eeEEEeCC-EEEEEcccCCCCccc
Q 021952 77 AACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGH-SLTRIGGN-RTVLFGGRGVGYEVL 154 (305)
Q Consensus 77 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~-~~~~~~~~-~i~v~GG~~~~~~~~ 154 (305)
-+++..++.+||.+... +..+++++++.. .-..|-.-. +....+.+. .++...++ .+++..+ .
T Consensus 141 DvavD~~GnaYVt~s~~-----~~~I~rV~pdG~-~~~~~~~~~--~~~~~~~G~nGIv~~pdg~~Liv~~~-~------ 205 (334)
T 2p9w_A 141 QSAQDRDGNSYVAFALG-----MPAIARVSADGK-TVSTFAWES--GNGGQRPGYSGITFDPHSNKLIAFGG-P------ 205 (334)
T ss_dssp EEEECTTSCEEEEEEES-----SCEEEEECTTSC-CEEEEEECC--CCSSSCCSCSEEEEETTTTEEEEESS-S------
T ss_pred eeEECCCCCEEEeCCCC-----CCeEEEEeCCCC-EEeeeeecC--CCcccccCcceEEEeCCCCEEEEEcC-C------
Confidence 34444556899976642 145899998863 000143211 222334443 45555334 5666654 2
Q ss_pred ceeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCCCccccccccc
Q 021952 155 NDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSML 234 (305)
Q Consensus 155 ~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 234 (305)
..+++||+.+ .....+....-.....+..+-.. .+.. .+++++++.-.. +..+++--.
T Consensus 206 g~L~~fD~~~--pv~~~v~~~~~G~~~~~~~~dgi-lp~~-~~G~vllV~~~~------~~~~~l~S~------------ 263 (334)
T 2p9w_A 206 RALTAFDVSK--PYAWPEPVKINGDFGTLSGTEKI-VTVP-VGNESVLVGARA------PYAISFRSW------------ 263 (334)
T ss_dssp SSEEEEECSS--SSCCCEECEESSCCCCCTTEEEE-EEEE-ETTEEEEEEEET------TEEEEEECS------------
T ss_pred CeEEEEcCCC--CcceeecccccCCcccccCcccc-cccc-cCCEEEEEEcCC------CCEEEEECC------------
Confidence 3599999876 32212210000000111111111 1222 577775554321 224555544
Q ss_pred cccccccccceeecccCcCCC---CCceeeeeee--CCCcEEEEEcCccC
Q 021952 235 DSRGLLLNMWKRLRAEGYKPN---CRSFHRACPD--YSGRYLYVFGGMVD 279 (305)
Q Consensus 235 ~~~~~~~~~W~~v~~~~~~p~---~r~~~~~~~~--~~~~~i~v~GG~~~ 279 (305)
++ |+.....+..|. ++....+++. ..+++||+.-+.-.
T Consensus 264 ------Dg-W~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~~f~ 306 (334)
T 2p9w_A 264 ------DN-WKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSAFFD 306 (334)
T ss_dssp ------ST-TSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEECCGG
T ss_pred ------CC-cceeEEeeeecCccccCceeEEEEeccccCCeEEEEeeecC
Confidence 45 988765554443 2332333221 36789999887643
No 189
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=24.59 E-value=3e+02 Score=22.78 Aligned_cols=108 Identities=13% Similarity=0.093 Sum_probs=54.4
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCC-C--CCcc-CCCeeEEEeCCEEEEEcccCCCCccccee
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHP-S--PPAR-SGHSLTRIGGNRTVLFGGRGVGYEVLNDV 157 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~-~--p~~r-~~~~~~~~~~~~i~v~GG~~~~~~~~~~~ 157 (305)
.++..++.|+.+ ..+.++|+.+. +-...-... . .... .-.+++...++.+++.|+.+ ..+
T Consensus 259 p~~~~l~s~s~D------~~i~lwd~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d------g~i 322 (380)
T 3iz6_a 259 PDGQRFGTGSDD------GTCRLFDMRTG----HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN------GDC 322 (380)
T ss_dssp TTSSEEEEECSS------SCEEEEETTTT----EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT------SCE
T ss_pred cCCCeEEEEcCC------CeEEEEECCCC----cEEEEecccccccccccCceEEEEECCCCCEEEEEECC------CCE
Confidence 344677777642 24888998875 322221111 0 0001 11234444456677777653 248
Q ss_pred EEEEccccceeEE-EeccccCCCCCCCCC---CcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecC
Q 021952 158 WFLDVYEGFFKWV-QIPYELQNIPAGFSL---PRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 158 ~~~d~~~~~~~W~-~~~~~~~~~~~~~p~---~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
..+|+.+ .+-. .+. .... .+... .....++.+++.|+.+.. +.++|+.
T Consensus 323 ~vwd~~~--~~~~~~~~--------~~~~~h~~~v~~-l~~s~dg~~l~sgs~D~~------i~iW~~~ 374 (380)
T 3iz6_a 323 YVWDTLL--AEMVLNLG--------TLQNSHEGRISC-LGLSSDGSALCTGSWDKN------LKIWAFS 374 (380)
T ss_dssp EEEETTT--CCEEEEEC--------CSCSSCCCCCCE-EEECSSSSEEEEECTTSC------EEEEECC
T ss_pred EEEECCC--CceEEEEe--------cccCCCCCceEE-EEECCCCCEEEEeeCCCC------EEEEecC
Confidence 8999877 4332 221 1111 11122 222246778888887653 6666765
No 190
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=24.50 E-value=3.2e+02 Score=23.01 Aligned_cols=64 Identities=6% Similarity=0.077 Sum_probs=32.8
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
.++.+++.|+.+ + .+.++|+.+. +-...- ... ...-.++....++..++.|+.+ ..+..+|
T Consensus 160 ~~~~~l~sgs~D--~----~i~iwd~~~~----~~~~~~--~~h-~~~V~~v~~~p~~~~l~s~s~D------~~i~~wd 220 (410)
T 1vyh_C 160 HSGKLLASCSAD--M----TIKLWDFQGF----ECIRTM--HGH-DHNVSSVSIMPNGDHIVSASRD------KTIKMWE 220 (410)
T ss_dssp TTSSEEEEEETT--S----CCCEEETTSS----CEEECC--CCC-SSCEEEEEECSSSSEEEEEETT------SEEEEEE
T ss_pred CCCCEEEEEeCC--C----eEEEEeCCCC----ceeEEE--cCC-CCCEEEEEEeCCCCEEEEEeCC------CeEEEEE
Confidence 344677777752 2 3566777654 322211 100 1111123333345667777754 3588899
Q ss_pred ccc
Q 021952 162 VYE 164 (305)
Q Consensus 162 ~~~ 164 (305)
+.+
T Consensus 221 ~~~ 223 (410)
T 1vyh_C 221 VQT 223 (410)
T ss_dssp TTT
T ss_pred CCC
Confidence 987
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=23.70 E-value=4.3e+02 Score=24.29 Aligned_cols=110 Identities=13% Similarity=0.046 Sum_probs=55.8
Q ss_pred cccceeeccccccccccc------c--eEEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCCccCcEEEEeccCCC
Q 021952 40 HNDTWIGQIACHENLGIT------L--SWRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENF 111 (305)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~------~--~W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~ 111 (305)
.+++|.+|+ .+ . .++.+.... .. ....+..+++.+|+.+..+ .....++.+|+++..
T Consensus 258 ~~~l~~~d~-------~~~~~~~~~~~~~~~l~~~~----~~-~~~~~s~dg~~l~~~s~~~---~~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 258 VNRLWYCDL-------QQESNGITGILKWVKLIDNF----EG-EYDYVTNEGTVFTFKTNRH---SPNYRLINIDFTDPE 322 (710)
T ss_dssp CCEEEEEEG-------GGSSSSSCSSCCCEEEECSS----SS-CEEEEEEETTEEEEEECTT---CTTCEEEEEETTSCC
T ss_pred ccEEEEEEC-------cccccccCCccceEEeeCCC----Cc-EEEEEeccCCEEEEEECCC---CCCCEEEEEeCCCCC
Confidence 457888888 33 2 466655321 11 1222333455788876542 224578999987640
Q ss_pred CCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEe
Q 021952 112 CFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 172 (305)
Q Consensus 112 ~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~ 172 (305)
.-.|+.+.... + ...-..+....++.+++....+ ....++++|+.++ ...+.+
T Consensus 323 -~~~~~~l~~~~-~-~~~~~~~~~~~~~~lv~~~~~~----g~~~l~~~~~~~g-~~~~~l 375 (710)
T 2xdw_A 323 -ESKWKVLVPEH-E-KDVLEWVACVRSNFLVLCYLHD----VKNTLQLHDLATG-ALLKIF 375 (710)
T ss_dssp -GGGCEEEECCC-S-SCEEEEEEEETTTEEEEEEEET----TEEEEEEEETTTC-CEEEEE
T ss_pred -cccceeccCCC-C-CCeEEEEEEEcCCEEEEEEEEC----CEEEEEEEECCCC-CEEEec
Confidence 00377765111 1 0111122333356776665432 2356899998651 234555
No 192
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=22.88 E-value=3.1e+02 Score=23.03 Aligned_cols=68 Identities=6% Similarity=-0.041 Sum_probs=36.7
Q ss_pred CCEEEEEccccC---CCCCcccceeecccccccccccceE-EecccCCCCCCCCCCceeEEe-cCC-EEEEEeccCCCCC
Q 021952 24 GDCLVLFGGIND---RGNRHNDTWIGQIACHENLGITLSW-RLLDVGSIAPPARGAHAACCI-DNR-KMVIHAGIGLYGL 97 (305)
Q Consensus 24 ~~~lyv~GG~~~---~~~~~~~~~~~~~~~~~~~~~~~~W-~~~~~~~~~p~~r~~~~~~~~-~~~-~lyv~GG~~~~~~ 97 (305)
++++|+...... .....++++++|+ .+.+- ..++ .+...+.+..- +++ .+|+. ..
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~-------~t~~vv~~i~------~g~~p~~i~~s~Dg~~~l~v~-~~----- 338 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTG-------LVGQTSSQIS------LGHDVDAISVAQDGGPDLYAL-SA----- 338 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEEC-------CCCEEEEEEE------CCCCcCeEEECCCCCeEEEEE-cC-----
Confidence 567998754211 1123568999999 55544 3332 22223333333 443 34443 32
Q ss_pred ccCcEEEEeccCC
Q 021952 98 RLGDTWVLELSEN 110 (305)
Q Consensus 98 ~~~~~~~~d~~~~ 110 (305)
..+++.++|.++.
T Consensus 339 ~~~~V~ViD~~t~ 351 (373)
T 2mad_H 339 GTEVLHIYDAGAG 351 (373)
T ss_pred CCCeEEEEECCCC
Confidence 1367999999876
No 193
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=22.47 E-value=3.6e+02 Score=22.93 Aligned_cols=66 Identities=11% Similarity=0.086 Sum_probs=34.5
Q ss_pred CCceeEEecCCEEEEEeccC--C--CCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEccc
Q 021952 74 GAHAACCIDNRKMVIHAGIG--L--YGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGR 147 (305)
Q Consensus 74 ~~~~~~~~~~~~lyv~GG~~--~--~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~ 147 (305)
..|+++...++.+|..|-.. . .+....+...-..-... -....+. .-..|+++...++.+|..|--
T Consensus 295 ~~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~l--~~v~~v~------~G~~hs~alt~~G~v~~wG~n 364 (413)
T 1a12_A 295 QHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVA------CGASVGYAVTKDGRVFAWGMG 364 (413)
T ss_dssp SSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECCSS--SSEEEEE------ECSSEEEEEETTSCEEEEECC
T ss_pred cceEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEEeccc--CceeEEE------ECcceEEEEeCCCCEEEecCC
Confidence 47888888778999998421 1 11111111110000000 0223332 234688888888899999843
No 194
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=22.35 E-value=3.4e+02 Score=22.53 Aligned_cols=68 Identities=7% Similarity=-0.028 Sum_probs=35.5
Q ss_pred CCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEc
Q 021952 83 NRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDV 162 (305)
Q Consensus 83 ~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~ 162 (305)
++.+++.|+.+ ..+.++|+++. +-..... ..........++...++.+++.|... ..-..+..+|+
T Consensus 187 ~~~~l~~~~~d------~~i~iwd~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~g~~~---~~d~~i~iwd~ 252 (402)
T 2aq5_A 187 DGALICTSCRD------KRVRVIEPRKG----TVVAEKD-RPHEGTRPVHAVFVSEGKILTTGFSR---MSERQVALWDT 252 (402)
T ss_dssp TSSCEEEEETT------SEEEEEETTTT----EEEEEEE-CSSCSSSCCEEEECSTTEEEEEEECT---TCCEEEEEEET
T ss_pred CCCEEEEEecC------CcEEEEeCCCC----ceeeeec-cCCCCCcceEEEEcCCCcEEEEeccC---CCCceEEEEcC
Confidence 44566666642 35889999875 3222110 11111112344455567777776211 01145889998
Q ss_pred cc
Q 021952 163 YE 164 (305)
Q Consensus 163 ~~ 164 (305)
.+
T Consensus 253 ~~ 254 (402)
T 2aq5_A 253 KH 254 (402)
T ss_dssp TB
T ss_pred cc
Confidence 77
No 195
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=22.06 E-value=3.7e+02 Score=22.87 Aligned_cols=63 Identities=10% Similarity=0.160 Sum_probs=35.2
Q ss_pred CCceeEEecCCEEEEEecc-CCCCC-----ccCcE---EEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEE
Q 021952 74 GAHAACCIDNRKMVIHAGI-GLYGL-----RLGDT---WVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLF 144 (305)
Q Consensus 74 ~~~~~~~~~~~~lyv~GG~-~~~~~-----~~~~~---~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~ 144 (305)
..|+++...++.+|..|-. ...+. ..... ... .... ...++. .-..|+++...++++|.+
T Consensus 120 ~~hs~alt~~G~v~~wG~~~n~~GqlG~~~~~~~~~~P~~v-~~~~----~i~~ia------~G~~hs~alt~~G~v~~w 188 (413)
T 1a12_A 120 DSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV-QLDV----PVVKVA------SGNDHLVMLTADGDLYTL 188 (413)
T ss_dssp SSEEEEEETTSCEEEEECEEETTEEEESSBBTBCEEEEEEE-CCSS----CEEEEE------ECSSEEEEEETTSCEEEE
T ss_pred CCeEEEEcCCCcEEEeeCCcCCCCccCcCCccccccCCEEe-cCCC----CEEEEE------ecCceEEEEcCCCCEEEe
Confidence 4788888877899999951 11110 00000 001 1111 344443 234688888888899999
Q ss_pred ccc
Q 021952 145 GGR 147 (305)
Q Consensus 145 GG~ 147 (305)
|--
T Consensus 189 G~n 191 (413)
T 1a12_A 189 GCG 191 (413)
T ss_dssp ECC
T ss_pred eCC
Confidence 843
No 196
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=21.81 E-value=5.6e+02 Score=24.94 Aligned_cols=98 Identities=10% Similarity=0.042 Sum_probs=52.0
Q ss_pred CcEE-EEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCC
Q 021952 100 GDTW-VLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQN 178 (305)
Q Consensus 100 ~~~~-~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~ 178 (305)
..+| ++|..++ +...+. . .......++...+++.++++... .+++.+|+.+ ++-..+.
T Consensus 358 ~~l~~~~d~~~~----~~~~l~--~--~~~~~~~~~~SpDG~~la~~~~~------~~v~~~d~~t--g~~~~~~----- 416 (1045)
T 1k32_A 358 GDFLGIYDYRTG----KAEKFE--E--NLGNVFAMGVDRNGKFAVVANDR------FEIMTVDLET--GKPTVIE----- 416 (1045)
T ss_dssp EEEEEEEETTTC----CEEECC--C--CCCSEEEEEECTTSSEEEEEETT------SEEEEEETTT--CCEEEEE-----
T ss_pred CceEEEEECCCC----CceEec--C--CccceeeeEECCCCCEEEEECCC------CeEEEEECCC--CceEEec-----
Confidence 4688 8898876 555443 1 11122334444456666666542 3799999998 6665552
Q ss_pred CCCCCCCCcceeEEEEEeCCEEEEEeccCC----CCCccCcEEEEecC
Q 021952 179 IPAGFSLPRVGHSATLILGGRVLIYGGEDS----ARRRKDDFWVLDTK 222 (305)
Q Consensus 179 ~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~----~~~~~~~~~~~d~~ 222 (305)
.. ........+. .-+++.+++++.+. .......++++|+.
T Consensus 417 --~~-~~~~v~~~~~-SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 417 --RS-REAMITDFTI-SDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp --EC-SSSCCCCEEE-CTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred --cC-CCCCccceEE-CCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 01 1111122222 24566566665432 01223578999987
No 197
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=21.57 E-value=3.2e+02 Score=21.94 Aligned_cols=18 Identities=11% Similarity=0.241 Sum_probs=13.1
Q ss_pred cceeEEEEccccceeE-EEec
Q 021952 154 LNDVWFLDVYEGFFKW-VQIP 173 (305)
Q Consensus 154 ~~~~~~~d~~~~~~~W-~~~~ 173 (305)
...++.+|+.+ ++. ..+.
T Consensus 151 ~~~l~~~d~~~--~~~~~~l~ 169 (347)
T 2gop_A 151 KTTFWIFDTES--EEVIEEFE 169 (347)
T ss_dssp EEEEEEEETTT--TEEEEEEE
T ss_pred cceEEEEECCC--CeEEeeec
Confidence 35699999988 666 5563
No 198
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=21.46 E-value=3.3e+02 Score=22.18 Aligned_cols=200 Identities=12% Similarity=0.006 Sum_probs=0.0
Q ss_pred CCEEEEEccccCCCCCcccceeecccccccccccceEEecccCCCCCCCCCCceeEEe----cCCEEEEEeccCCCCCcc
Q 021952 24 GDCLVLFGGINDRGNRHNDTWIGQIACHENLGITLSWRLLDVGSIAPPARGAHAACCI----DNRKMVIHAGIGLYGLRL 99 (305)
Q Consensus 24 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~p~~r~~~~~~~~----~~~~lyv~GG~~~~~~~~ 99 (305)
++++++.|+... .+.++|+...........-.........+........++. ++ .+++.|+.+..
T Consensus 55 ~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~s~~~d~~---- 123 (408)
T 4a11_B 55 EGRYMLSGGSDG------VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDT-GMFTSSSFDKT---- 123 (408)
T ss_dssp TCCEEEEEETTS------CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCT-TCEEEEETTSE----
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCC-cEEEEEeCCCe----
Q ss_pred CcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEe-CCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCC
Q 021952 100 GDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIG-GNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQN 178 (305)
Q Consensus 100 ~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~ 178 (305)
+.++|+.+. +-.... ..+.+.......... ++.+++.|+.+ ..+..+|+.+ ..-...-
T Consensus 124 --i~iwd~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~v~~~d~~~--~~~~~~~----- 182 (408)
T 4a11_B 124 --LKVWDTNTL----QTADVF--NFEETVYSHHMSPVSTKHCLVAVGTRG------PKVQLCDLKS--GSCSHIL----- 182 (408)
T ss_dssp --EEEEETTTT----EEEEEE--ECSSCEEEEEECSSCSSCCEEEEEESS------SSEEEEESSS--SCCCEEE-----
T ss_pred --EEEeeCCCC----ccceec--cCCCceeeeEeecCCCCCcEEEEEcCC------CeEEEEeCCC--cceeeee-----
Q ss_pred CCCCCCCCcceeEEEEEeCCEEEEEeccCCCCCccCcEEEEecCCCCccccccccccccccccccceeecccCcC-----
Q 021952 179 IPAGFSLPRVGHSATLILGGRVLIYGGEDSARRRKDDFWVLDTKAIPFTSVQQSMLDSRGLLLNMWKRLRAEGYK----- 253 (305)
Q Consensus 179 ~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~W~~v~~~~~~----- 253 (305)
..........+..-.+..+++.|+.+.. +.++|+... ......+......
T Consensus 183 ---~~~~~~v~~~~~~~~~~~ll~~~~~dg~------i~i~d~~~~----------------~~~~~~~~~~~~~~~~~~ 237 (408)
T 4a11_B 183 ---QGHRQEILAVSWSPRYDYILATASADSR------VKLWDVRRA----------------SGCLITLDQHNGKKSQAV 237 (408)
T ss_dssp ---CCCCSCEEEEEECSSCTTEEEEEETTSC------EEEEETTCS----------------SCCSEECCTTTTCSCCCT
T ss_pred ---cCCCCcEEEEEECCCCCcEEEEEcCCCc------EEEEECCCC----------------Ccccccccccccccceee
Q ss_pred ----CCCCceeeeeeeCCCcEEEEEcCccCC
Q 021952 254 ----PNCRSFHRACPDYSGRYLYVFGGMVDG 280 (305)
Q Consensus 254 ----p~~r~~~~~~~~~~~~~i~v~GG~~~~ 280 (305)
......-..+.+..++..++.|+....
T Consensus 238 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 268 (408)
T 4a11_B 238 ESANTAHNGKVNGLCFTSDGLHLLTVGTDNR 268 (408)
T ss_dssp TTSSCSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred ccccccccCceeEEEEcCCCCEEEEecCCCe
No 199
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=21.29 E-value=3.1e+02 Score=21.79 Aligned_cols=82 Identities=11% Similarity=-0.060 Sum_probs=42.2
Q ss_pred eEEecCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccC-CCCCccCCCeeEEEeCCEEEEE----cccC----
Q 021952 78 ACCIDNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTH-PSPPARSGHSLTRIGGNRTVLF----GGRG---- 148 (305)
Q Consensus 78 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~-~~p~~r~~~~~~~~~~~~i~v~----GG~~---- 148 (305)
.+...++++|+.... ...+.++|.+ + +.+.+... .......-..+++..++.+|+. |-..
T Consensus 91 l~~d~dG~l~v~~~~------~~~v~~~~~~-g----~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~ 159 (305)
T 3dr2_A 91 NAVDAQQRLVHCEHG------RRAITRSDAD-G----QAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQG 159 (305)
T ss_dssp EEECTTSCEEEEETT------TTEEEEECTT-S----CEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGS
T ss_pred eeECCCCCEEEEECC------CCEEEEECCC-C----CEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccc
Confidence 333444577775321 1358888876 4 55555410 1100111234555556788875 3211
Q ss_pred ---CCCcccceeEEEEccccceeEEEe
Q 021952 149 ---VGYEVLNDVWFLDVYEGFFKWVQI 172 (305)
Q Consensus 149 ---~~~~~~~~~~~~d~~~~~~~W~~~ 172 (305)
........++++|+.+ ++.+.+
T Consensus 160 ~~~~~~~~~~~v~~~d~~~--g~~~~~ 184 (305)
T 3dr2_A 160 CPADPELAHHSVYRLPPDG--SPLQRM 184 (305)
T ss_dssp CCCCCSSSCEEEEEECSSS--CCCEEE
T ss_pred cccccccCCCeEEEEcCCC--CcEEEE
Confidence 0011235799999987 666665
No 200
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=20.80 E-value=4.4e+02 Score=23.31 Aligned_cols=35 Identities=20% Similarity=0.128 Sum_probs=21.1
Q ss_pred CceeEEecCCEEEEEeccCCCCCccCcEEEEeccCC
Q 021952 75 AHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSEN 110 (305)
Q Consensus 75 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~~ 110 (305)
-|......++ ||+..--+..+..-..+.++|.+|.
T Consensus 140 Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~ 174 (462)
T 2ece_A 140 LHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSF 174 (462)
T ss_dssp EEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTC
T ss_pred ccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCC
Confidence 4555555555 7773222223444578999999976
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=20.75 E-value=5.1e+02 Score=24.01 Aligned_cols=104 Identities=14% Similarity=0.029 Sum_probs=55.2
Q ss_pred cccceeecccccccccccc--e-EEecccCCCCCCCCCCceeEEecCCEEEEEeccCCCCCccCcEEEEeccC--CCCCc
Q 021952 40 HNDTWIGQIACHENLGITL--S-WRLLDVGSIAPPARGAHAACCIDNRKMVIHAGIGLYGLRLGDTWVLELSE--NFCFG 114 (305)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~--~-W~~~~~~~~~p~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~d~~~--~~~~~ 114 (305)
.+++|.+|+ .+. . |+.+.... .. ....+.-+++.||+....+ .....++.+|+++ .
T Consensus 293 ~~~l~~~d~-------~~~~~~~~~~l~~~~---~~--~~~~~~~dg~~l~~~s~~~---~~~~~l~~~d~~~~~~---- 353 (741)
T 1yr2_A 293 VNTVHVARV-------TNGKIGPVTALIPDL---KA--QWDFVDGVGDQLWFVSGDG---APLKKIVRVDLSGSTP---- 353 (741)
T ss_dssp CCEEEEEEE-------ETTEECCCEEEECSS---SS--CEEEEEEETTEEEEEECTT---CTTCEEEEEECSSSSC----
T ss_pred cceEEEEEC-------CCCCCcccEEecCCC---Cc--eEEEEeccCCEEEEEECCC---CCCCEEEEEeCCCCcc----
Confidence 457888888 444 5 77765321 11 1122223444777765431 2245689999887 4
Q ss_pred CeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEe
Q 021952 115 SWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQI 172 (305)
Q Consensus 115 ~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~ 172 (305)
+|..+.. ...... ...... ++.+++....+ -...++.+|+.. ..-..+
T Consensus 354 ~~~~l~~--~~~~~l-~~~~~~-~~~lv~~~~~d----g~~~l~~~~~~g--~~~~~l 401 (741)
T 1yr2_A 354 RFDTVVP--ESKDNL-ESVGIA-GNRLFASYIHD----AKSQVLAFDLDG--KPAGAV 401 (741)
T ss_dssp EEEEEEC--CCSSEE-EEEEEE-BTEEEEEEEET----TEEEEEEEETTS--CEEEEC
T ss_pred ccEEEec--CCCCeE-EEEEEE-CCEEEEEEEEC----CEEEEEEEeCCC--Cceeec
Confidence 6877751 111111 112233 46776665432 235688898765 444444
No 202
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=20.62 E-value=3.5e+02 Score=22.14 Aligned_cols=68 Identities=7% Similarity=0.102 Sum_probs=34.4
Q ss_pred CeeEEEeCCEEEEEcccCCCCcccceeEEEEccccceeEEEeccccCCCCCCCCCCcceeEEEEEeCCEEEEEeccCCCC
Q 021952 131 HSLTRIGGNRTVLFGGRGVGYEVLNDVWFLDVYEGFFKWVQIPYELQNIPAGFSLPRVGHSATLILGGRVLIYGGEDSAR 210 (305)
Q Consensus 131 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d~~~~~~~W~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~l~v~GG~~~~~ 210 (305)
.++....++. ++.|+.. ..+..||+.+ ..-.... .... . .-.+.....++.+++.|+.+.
T Consensus 210 ~~~~~~~~~~-~~~~~~~------g~i~~~d~~~--~~~~~~~-------~~~~-~-~i~~~~~~~~~~~l~~~~~d~-- 269 (425)
T 1r5m_A 210 VDVEWVDDDK-FVIPGPK------GAIFVYQITE--KTPTGKL-------IGHH-G-PISVLEFNDTNKLLLSASDDG-- 269 (425)
T ss_dssp SCCEEEETTE-EEEECGG------GCEEEEETTC--SSCSEEE-------CCCS-S-CEEEEEEETTTTEEEEEETTS--
T ss_pred eEEEEcCCCE-EEEEcCC------CeEEEEEcCC--Cceeeee-------ccCC-C-ceEEEEECCCCCEEEEEcCCC--
Confidence 3444454444 5555543 3588999987 3221110 0111 1 112222224566777777643
Q ss_pred CccCcEEEEecC
Q 021952 211 RRKDDFWVLDTK 222 (305)
Q Consensus 211 ~~~~~~~~~d~~ 222 (305)
.+.++|+.
T Consensus 270 ----~i~i~d~~ 277 (425)
T 1r5m_A 270 ----TLRIWHGG 277 (425)
T ss_dssp ----CEEEECSS
T ss_pred ----EEEEEECC
Confidence 37888876
No 203
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=20.57 E-value=3.3e+02 Score=21.77 Aligned_cols=19 Identities=16% Similarity=0.223 Sum_probs=13.7
Q ss_pred CEEEEEeccCCCCCccCcEEEEecC
Q 021952 198 GRVLIYGGEDSARRRKDDFWVLDTK 222 (305)
Q Consensus 198 ~~l~v~GG~~~~~~~~~~~~~~d~~ 222 (305)
+.+++.|+.+.. +.++|+.
T Consensus 71 ~~~l~s~s~D~~------v~iWd~~ 89 (316)
T 3bg1_A 71 GNILASCSYDRK------VIIWREE 89 (316)
T ss_dssp SSCEEEEETTSC------EEEECCS
T ss_pred CCEEEEEECCCE------EEEEECC
Confidence 567888877543 7788876
No 204
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=20.14 E-value=6.4e+02 Score=24.92 Aligned_cols=64 Identities=6% Similarity=-0.048 Sum_probs=35.0
Q ss_pred cCCEEEEEeccCCCCCccCcEEEEeccCCCCCcCeEEcccCCCCCccCCCeeEEEeCCEEEEEcccCCCCcccceeEEEE
Q 021952 82 DNRKMVIHAGIGLYGLRLGDTWVLELSENFCFGSWQQLVTHPSPPARSGHSLTRIGGNRTVLFGGRGVGYEVLNDVWFLD 161 (305)
Q Consensus 82 ~~~~lyv~GG~~~~~~~~~~~~~~d~~~~~~~~~W~~~~~~~~p~~r~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~d 161 (305)
.++++++.||. + ..+.++|..+. +-...-. . . ...-.+++...+++.++.|+.+ ..+.++|
T Consensus 625 ~~~~~l~s~~~--d----~~i~vw~~~~~----~~~~~~~-~-h-~~~v~~~~~s~~~~~l~s~~~d------~~v~vwd 685 (1249)
T 3sfz_A 625 QDGQRIASCGA--D----KTLQVFKAETG----EKLLDIK-A-H-EDEVLCCAFSSDDSYIATCSAD------KKVKIWD 685 (1249)
T ss_dssp TTSSEEEEEET--T----SCEEEEETTTC----CEEEEEC-C-C-SSCEEEEEECTTSSEEEEEETT------SEEEEEE
T ss_pred CCCCEEEEEeC--C----CeEEEEECCCC----CEEEEec-c-C-CCCEEEEEEecCCCEEEEEeCC------CeEEEEE
Confidence 34467777764 2 24888998876 3222111 0 1 1111223334456677777653 3588999
Q ss_pred ccc
Q 021952 162 VYE 164 (305)
Q Consensus 162 ~~~ 164 (305)
+.+
T Consensus 686 ~~~ 688 (1249)
T 3sfz_A 686 SAT 688 (1249)
T ss_dssp TTT
T ss_pred CCC
Confidence 988
Done!