Query 021955
Match_columns 305
No_of_seqs 270 out of 559
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 11:50:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021955.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021955hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dlx_A UBX domain-containing p 100.0 2.7E-33 9.3E-38 239.6 13.8 134 101-235 7-140 (153)
2 2ec4_A FAS-associated factor 1 100.0 5.2E-30 1.8E-34 224.5 12.5 134 102-235 17-172 (178)
3 3f9u_A Putative exported cytoc 99.6 1.2E-14 4.1E-19 123.1 10.4 113 120-233 31-168 (172)
4 2kuc_A Putative disulphide-iso 99.5 2.2E-13 7.4E-18 109.4 12.7 110 121-231 12-121 (130)
5 2lst_A Thioredoxin; structural 99.2 3.9E-15 1.3E-19 119.9 0.0 115 121-236 5-121 (130)
6 2ju5_A Thioredoxin disulfide i 99.5 6.1E-13 2.1E-17 111.5 12.5 107 123-231 34-152 (154)
7 3ph9_A Anterior gradient prote 99.4 1.4E-13 4.9E-18 116.8 8.0 112 119-234 27-148 (151)
8 3ira_A Conserved protein; meth 99.4 1.1E-12 3.8E-17 113.9 9.7 109 121-232 24-145 (173)
9 1v92_A NSFL1 cofactor P47; 3-h 99.3 1.1E-12 3.7E-17 89.7 5.2 43 6-49 3-45 (46)
10 2dam_A ETEA protein; KIAA0887, 99.3 1.6E-12 5.5E-17 96.2 5.9 49 1-50 11-60 (67)
11 3fk8_A Disulphide isomerase; A 99.3 1.1E-11 3.6E-16 100.2 10.2 104 123-228 16-130 (133)
12 2dal_A Protein KIAA0794; FAS a 99.3 3.8E-12 1.3E-16 92.8 6.2 46 4-50 11-56 (62)
13 2fwh_A Thiol:disulfide interch 99.3 1.4E-11 4.8E-16 100.4 10.3 110 115-228 11-125 (134)
14 3e21_A HFAF1, FAS-associated f 99.3 2E-12 6.9E-17 88.2 3.1 42 5-47 2-44 (45)
15 2dzl_A Protein FAM100B; UBA-li 99.2 1.8E-11 6.1E-16 90.3 5.7 49 1-50 8-58 (66)
16 1ep7_A Thioredoxin CH1, H-type 99.0 2.1E-09 7.3E-14 83.3 10.7 102 122-231 10-111 (112)
17 1xfl_A Thioredoxin H1; AT3G510 99.0 2.7E-09 9.1E-14 85.8 11.0 101 119-230 21-123 (124)
18 2l57_A Uncharacterized protein 99.0 1.2E-09 4.3E-14 87.0 8.9 99 132-234 22-120 (126)
19 2vm1_A Thioredoxin, thioredoxi 99.0 2.4E-09 8.2E-14 83.6 9.8 104 118-232 10-115 (118)
20 3zzx_A Thioredoxin; oxidoreduc 99.0 2.7E-09 9.2E-14 84.3 9.7 92 122-226 8-101 (105)
21 3qfa_C Thioredoxin; protein-pr 99.0 4E-09 1.4E-13 83.6 10.7 99 118-229 15-115 (116)
22 2vlu_A Thioredoxin, thioredoxi 99.0 5.1E-09 1.7E-13 82.7 10.9 106 115-231 13-120 (122)
23 3d22_A TRXH4, thioredoxin H-ty 98.9 4.2E-09 1.4E-13 85.3 10.3 103 120-233 30-134 (139)
24 1ti3_A Thioredoxin H, PTTRXH1; 98.9 4E-09 1.4E-13 81.7 9.4 100 121-231 11-112 (113)
25 2dml_A Protein disulfide-isome 98.9 6.6E-09 2.2E-13 82.9 10.8 104 122-234 24-127 (130)
26 3tco_A Thioredoxin (TRXA-1); d 98.9 7.1E-09 2.4E-13 79.5 10.0 99 121-230 10-108 (109)
27 3gnj_A Thioredoxin domain prot 98.9 1.4E-08 4.8E-13 78.3 11.1 91 134-231 20-110 (111)
28 3dml_A Putative uncharacterize 98.9 2.1E-09 7.2E-14 87.5 6.0 97 135-234 17-113 (116)
29 2voc_A Thioredoxin; electron t 98.9 1.4E-08 4.7E-13 79.5 10.5 99 121-231 7-105 (112)
30 1thx_A Thioredoxin, thioredoxi 98.9 1.4E-08 4.6E-13 78.7 10.1 101 122-232 14-114 (115)
31 3p2a_A Thioredoxin 2, putative 98.9 1.8E-08 6.3E-13 82.7 11.4 103 121-234 44-146 (148)
32 1x5d_A Protein disulfide-isome 98.9 1.4E-08 4.6E-13 81.1 10.3 100 123-232 15-118 (133)
33 3d6i_A Monothiol glutaredoxin- 98.9 1.4E-08 4.8E-13 78.9 10.0 97 123-231 9-109 (112)
34 3die_A Thioredoxin, TRX; elect 98.9 1.3E-08 4.5E-13 77.7 9.4 96 121-228 9-104 (106)
35 1w4v_A Thioredoxin, mitochondr 98.8 1.9E-08 6.6E-13 79.6 10.5 91 133-230 28-118 (119)
36 1dby_A Chloroplast thioredoxin 98.8 1.7E-08 5.9E-13 77.5 9.8 94 130-230 13-106 (107)
37 2yzu_A Thioredoxin; redox prot 98.8 1.8E-08 6.1E-13 77.0 9.6 97 123-230 9-105 (109)
38 2i4a_A Thioredoxin; acidophIle 98.8 2E-08 6.7E-13 76.8 9.7 97 122-228 9-105 (107)
39 1r26_A Thioredoxin; redox-acti 98.8 2E-08 6.8E-13 81.1 10.0 95 123-232 28-124 (125)
40 2e0q_A Thioredoxin; electron t 98.8 3.3E-08 1.1E-12 74.7 10.7 98 122-231 6-103 (104)
41 2trx_A Thioredoxin; electron t 98.8 2.8E-08 9.6E-13 76.4 10.4 98 123-230 10-107 (108)
42 1nsw_A Thioredoxin, TRX; therm 98.8 1.2E-08 3.9E-13 78.2 8.1 91 131-228 12-102 (105)
43 3hz4_A Thioredoxin; NYSGXRC, P 98.8 2.1E-08 7.2E-13 81.9 9.7 101 125-232 13-113 (140)
44 3f3q_A Thioredoxin-1; His TAG, 98.8 2.8E-08 9.4E-13 77.7 10.0 88 130-228 18-107 (109)
45 1sen_A Thioredoxin-like protei 98.8 7.6E-09 2.6E-13 87.5 7.2 117 109-235 22-152 (164)
46 4euy_A Uncharacterized protein 98.8 1.3E-08 4.4E-13 78.7 7.8 87 134-230 16-104 (105)
47 1t00_A Thioredoxin, TRX; redox 98.8 1.7E-08 5.7E-13 78.3 8.4 92 133-231 20-111 (112)
48 3m9j_A Thioredoxin; oxidoreduc 98.8 2.4E-08 8.4E-13 76.2 9.2 94 123-229 9-104 (105)
49 3hxs_A Thioredoxin, TRXP; elec 98.8 2.3E-08 7.8E-13 81.0 9.5 90 135-231 50-139 (141)
50 3uvt_A Thioredoxin domain-cont 98.8 5.3E-08 1.8E-12 74.9 11.1 93 121-228 11-109 (111)
51 3ul3_B Thioredoxin, thioredoxi 98.8 1.6E-08 5.5E-13 81.2 8.2 92 129-227 35-126 (128)
52 2dj1_A Protein disulfide-isome 98.8 6.7E-08 2.3E-12 78.0 11.9 100 122-233 24-126 (140)
53 2l5l_A Thioredoxin; structural 98.8 1.8E-08 6.3E-13 81.8 8.5 94 135-235 37-130 (136)
54 1fb6_A Thioredoxin M; electron 98.8 2E-08 6.8E-13 76.6 8.2 97 123-229 8-104 (105)
55 2o8v_B Thioredoxin 1; disulfid 98.8 2.4E-08 8.1E-13 80.8 9.0 98 123-230 30-127 (128)
56 1gh2_A Thioredoxin-like protei 98.8 5.6E-08 1.9E-12 75.0 10.6 97 121-230 8-106 (107)
57 1syr_A Thioredoxin; SGPP, stru 98.8 2.8E-08 9.6E-13 77.6 8.9 93 121-228 15-109 (112)
58 1xwb_A Thioredoxin; dimerizati 98.8 5.3E-08 1.8E-12 74.2 10.3 96 123-228 9-104 (106)
59 1wmj_A Thioredoxin H-type; str 98.8 3.9E-09 1.3E-13 83.9 3.7 104 118-232 18-123 (130)
60 2xc2_A Thioredoxinn; oxidoredu 98.7 4.8E-08 1.7E-12 76.7 9.9 94 123-229 22-116 (117)
61 2f51_A Thioredoxin; electron t 98.7 7E-08 2.4E-12 76.6 10.9 103 121-230 8-112 (118)
62 2b5x_A YKUV protein, TRXY; thi 98.7 6.7E-08 2.3E-12 77.6 10.5 97 132-232 25-146 (148)
63 2f9s_A Thiol-disulfide oxidore 98.7 4.8E-08 1.7E-12 79.7 9.5 97 134-233 24-140 (151)
64 2ppt_A Thioredoxin-2; thiredox 98.7 6.1E-08 2.1E-12 81.2 10.1 91 134-231 62-152 (155)
65 2i1u_A Thioredoxin, TRX, MPT46 98.7 1.6E-08 5.3E-13 79.4 6.0 90 132-228 26-115 (121)
66 2wz9_A Glutaredoxin-3; protein 98.7 8.9E-08 3E-12 79.4 10.8 98 122-232 20-119 (153)
67 1zzo_A RV1677; thioredoxin fol 98.7 4.8E-08 1.7E-12 77.1 8.7 90 134-231 23-135 (136)
68 3raz_A Thioredoxin-related pro 98.7 5.2E-08 1.8E-12 79.8 8.9 95 134-235 22-144 (151)
69 3aps_A DNAJ homolog subfamily 98.7 4.4E-08 1.5E-12 77.2 8.0 101 126-233 11-115 (122)
70 2lja_A Putative thiol-disulfid 98.7 1E-07 3.5E-12 77.5 10.4 98 135-236 29-148 (152)
71 2oe3_A Thioredoxin-3; electron 98.7 9.6E-08 3.3E-12 75.5 9.9 90 126-226 20-111 (114)
72 3apq_A DNAJ homolog subfamily 98.7 1.1E-07 3.7E-12 83.0 11.1 111 112-233 92-204 (210)
73 3qou_A Protein YBBN; thioredox 98.7 8.2E-08 2.8E-12 87.1 10.6 102 120-230 12-113 (287)
74 1lu4_A Soluble secreted antige 98.7 6.3E-08 2.2E-12 76.8 8.5 89 134-230 22-135 (136)
75 2vim_A Thioredoxin, TRX; thior 98.7 1.8E-07 6.3E-12 70.9 10.7 94 123-229 8-103 (104)
76 1v98_A Thioredoxin; oxidoreduc 98.7 1.1E-07 3.6E-12 77.3 9.8 99 122-231 40-138 (140)
77 2j23_A Thioredoxin; immune pro 98.6 1E-07 3.5E-12 75.7 9.1 96 123-230 24-120 (121)
78 3dxb_A Thioredoxin N-terminall 98.6 8.2E-08 2.8E-12 84.7 9.1 103 122-234 19-121 (222)
79 2l6c_A Thioredoxin; oxidoreduc 98.6 1E-07 3.5E-12 74.5 8.5 96 121-231 9-106 (110)
80 3h79_A Thioredoxin-like protei 98.6 2E-07 6.9E-12 74.4 10.3 95 121-228 21-125 (127)
81 3cxg_A Putative thioredoxin; m 98.6 5.7E-08 2E-12 79.0 7.2 98 123-231 29-129 (133)
82 1mek_A Protein disulfide isome 98.6 4.9E-08 1.7E-12 75.8 6.3 95 121-229 13-115 (120)
83 3erw_A Sporulation thiol-disul 98.6 8.4E-08 2.9E-12 76.8 7.8 88 135-226 33-144 (145)
84 3lor_A Thiol-disulfide isomera 98.6 5.4E-08 1.8E-12 79.9 6.7 96 130-232 24-156 (160)
85 3kh7_A Thiol:disulfide interch 98.6 1.1E-07 3.7E-12 80.7 8.9 92 134-232 56-168 (176)
86 3gix_A Thioredoxin-like protei 98.6 1.2E-07 4.1E-12 78.9 8.9 97 124-232 13-122 (149)
87 2b1k_A Thiol:disulfide interch 98.6 7.3E-08 2.5E-12 80.1 7.6 91 135-232 50-161 (168)
88 3fkf_A Thiol-disulfide oxidore 98.6 1.6E-07 5.5E-12 75.5 9.3 87 135-231 32-146 (148)
89 1kng_A Thiol:disulfide interch 98.6 1.3E-07 4.5E-12 77.0 8.8 91 135-232 41-153 (156)
90 3hcz_A Possible thiol-disulfid 98.6 1.2E-07 4E-12 76.3 8.4 94 135-231 30-146 (148)
91 4evm_A Thioredoxin family prot 98.6 2E-07 6.9E-12 73.2 9.2 91 134-228 20-136 (138)
92 2av4_A Thioredoxin-like protei 98.6 1.4E-07 4.7E-12 80.8 8.7 99 122-232 29-140 (160)
93 3emx_A Thioredoxin; structural 98.6 1.7E-07 5.8E-12 76.1 8.7 89 138-234 33-129 (135)
94 1faa_A Thioredoxin F; electron 98.6 3.4E-07 1.2E-11 72.3 10.2 97 121-229 24-122 (124)
95 1zma_A Bacterocin transport ac 98.6 4.7E-07 1.6E-11 71.2 10.9 87 132-226 25-116 (118)
96 3or5_A Thiol:disulfide interch 98.6 4.3E-07 1.5E-11 74.6 10.7 97 135-234 33-154 (165)
97 2l5o_A Putative thioredoxin; s 98.6 2.7E-07 9.3E-12 75.0 9.4 98 134-234 26-144 (153)
98 2pu9_C TRX-F, thioredoxin F-ty 98.6 2.4E-07 8.3E-12 71.8 8.6 97 122-230 12-110 (111)
99 3lwa_A Secreted thiol-disulfid 98.6 4.1E-07 1.4E-11 76.9 10.7 95 135-232 58-182 (183)
100 1oaz_A Thioredoxin 1; immune s 98.5 8.3E-08 2.8E-12 77.1 5.1 97 122-228 10-120 (123)
101 2yj7_A LPBCA thioredoxin; oxid 97.9 1.2E-08 4E-13 77.5 0.0 92 131-229 14-105 (106)
102 1qgv_A Spliceosomal protein U5 98.5 5.8E-07 2E-11 74.1 10.3 91 135-232 22-122 (142)
103 3eyt_A Uncharacterized protein 98.5 4.7E-07 1.6E-11 74.1 9.5 93 133-232 25-153 (158)
104 2lrn_A Thiol:disulfide interch 98.5 9.9E-07 3.4E-11 72.1 11.2 93 135-233 28-143 (152)
105 3gl3_A Putative thiol:disulfid 98.5 9.4E-07 3.2E-11 71.7 10.9 99 132-233 24-144 (152)
106 2dbc_A PDCL2, unnamed protein 98.5 2.2E-07 7.7E-12 75.7 6.6 98 122-233 17-119 (135)
107 2h30_A Thioredoxin, peptide me 98.5 2.4E-07 8.2E-12 76.2 6.6 95 134-231 36-156 (164)
108 3kcm_A Thioredoxin family prot 98.4 5.9E-07 2E-11 73.1 8.6 98 134-234 26-146 (154)
109 3q6o_A Sulfhydryl oxidase 1; p 98.4 6.6E-07 2.3E-11 79.6 9.7 117 110-234 5-130 (244)
110 2ggt_A SCO1 protein homolog, m 98.4 1.4E-06 4.7E-11 71.6 10.7 95 135-233 22-163 (164)
111 3ia1_A THIO-disulfide isomeras 98.4 5.6E-07 1.9E-11 73.3 8.2 90 137-232 31-145 (154)
112 2qsi_A Putative hydrogenase ex 98.4 3.7E-06 1.3E-10 70.2 13.0 112 106-232 8-124 (137)
113 2dj0_A Thioredoxin-related tra 98.4 5.8E-07 2E-11 72.7 7.9 91 122-221 14-111 (137)
114 2qgv_A Hydrogenase-1 operon pr 98.4 1.8E-06 6.1E-11 72.4 10.7 109 106-231 11-125 (140)
115 2lrt_A Uncharacterized protein 98.4 1.4E-06 5E-11 71.7 9.7 91 135-228 34-145 (152)
116 1jfu_A Thiol:disulfide interch 98.4 1.7E-06 5.8E-11 73.1 10.3 94 135-232 59-181 (186)
117 3hdc_A Thioredoxin family prot 98.4 8.2E-07 2.8E-11 73.2 8.0 90 135-227 40-148 (158)
118 2djj_A PDI, protein disulfide- 98.4 4.2E-07 1.5E-11 71.2 6.0 88 134-230 23-116 (121)
119 3bq3_A Defective in cullin ned 98.4 1.9E-07 6.6E-12 86.2 4.4 46 5-51 12-57 (270)
120 3ed3_A Protein disulfide-isome 98.4 1.2E-06 4E-11 81.3 9.6 100 123-230 25-141 (298)
121 1x5e_A Thioredoxin domain cont 98.4 1.4E-06 4.6E-11 69.1 8.7 96 122-231 14-110 (126)
122 1a8l_A Protein disulfide oxido 98.4 3.3E-06 1.1E-10 73.5 11.7 92 132-230 129-225 (226)
123 2dj3_A Protein disulfide-isome 98.3 8.3E-07 2.9E-11 70.8 6.9 93 135-233 24-120 (133)
124 3idv_A Protein disulfide-isome 98.3 2.6E-06 8.8E-11 74.5 10.6 100 121-232 21-123 (241)
125 2rli_A SCO2 protein homolog, m 98.3 4.4E-06 1.5E-10 69.1 11.3 95 135-233 25-166 (171)
126 3t58_A Sulfhydryl oxidase 1; o 98.3 2.1E-06 7E-11 85.9 10.8 119 110-234 5-130 (519)
127 3fw2_A Thiol-disulfide oxidore 98.3 3.3E-06 1.1E-10 68.8 10.1 92 135-232 32-149 (150)
128 3ha9_A Uncharacterized thiored 98.3 2.5E-06 8.6E-11 70.5 9.5 87 135-230 36-163 (165)
129 2es7_A Q8ZP25_salty, putative 98.3 2E-06 6.9E-11 71.4 8.6 99 120-232 22-126 (142)
130 2ywi_A Hypothetical conserved 98.2 3.5E-06 1.2E-10 71.5 9.1 99 135-236 44-179 (196)
131 3eur_A Uncharacterized protein 98.2 4.6E-06 1.6E-10 67.3 9.1 80 135-215 30-132 (142)
132 3ewl_A Uncharacterized conserv 98.2 4.5E-06 1.5E-10 66.9 9.0 90 135-228 26-138 (142)
133 1a0r_P Phosducin, MEKA, PP33; 98.2 6.7E-07 2.3E-11 81.4 3.9 101 123-235 121-226 (245)
134 1nho_A Probable thioredoxin; b 98.2 4.1E-06 1.4E-10 61.2 7.5 81 139-230 4-84 (85)
135 1wou_A Thioredoxin -related pr 98.2 3.9E-06 1.3E-10 66.8 7.9 94 123-231 13-121 (123)
136 1i5g_A Tryparedoxin II; electr 98.2 6.2E-06 2.1E-10 66.5 9.1 77 134-213 26-126 (144)
137 1o8x_A Tryparedoxin, TRYX, TXN 98.2 4.3E-06 1.5E-10 67.8 8.0 78 133-213 25-126 (146)
138 3drn_A Peroxiredoxin, bacterio 98.2 7E-06 2.4E-10 68.1 9.3 94 135-231 27-145 (161)
139 2hyx_A Protein DIPZ; thioredox 98.2 5.2E-06 1.8E-10 79.2 9.3 96 135-233 81-201 (352)
140 1o73_A Tryparedoxin; electron 98.2 7.7E-06 2.6E-10 65.7 8.8 78 133-213 25-126 (144)
141 2p5q_A Glutathione peroxidase 98.2 1E-05 3.5E-10 66.7 9.7 94 135-231 31-168 (170)
142 2trc_P Phosducin, MEKA, PP33; 98.1 1.7E-06 5.7E-11 77.0 5.1 102 121-234 106-212 (217)
143 3cmi_A Peroxiredoxin HYR1; thi 98.1 7.1E-06 2.4E-10 68.6 8.7 94 135-232 31-169 (171)
144 1fo5_A Thioredoxin; disulfide 98.1 8E-06 2.7E-10 59.6 7.8 82 137-229 3-84 (85)
145 2v1m_A Glutathione peroxidase; 98.1 1.5E-05 5.2E-10 65.5 10.4 95 135-232 30-168 (169)
146 3s9f_A Tryparedoxin; thioredox 98.1 9.4E-06 3.2E-10 68.0 9.0 77 133-212 45-145 (165)
147 2vup_A Glutathione peroxidase- 98.1 1.1E-05 3.7E-10 69.0 9.3 95 135-232 47-186 (190)
148 3idv_A Protein disulfide-isome 98.1 1.5E-05 5.2E-10 69.5 10.3 99 121-231 136-237 (241)
149 2b5e_A Protein disulfide-isome 98.1 1.4E-05 4.7E-10 78.4 10.9 99 121-230 20-121 (504)
150 3f8u_A Protein disulfide-isome 98.1 5.3E-06 1.8E-10 80.7 7.1 102 122-231 8-109 (481)
151 2bmx_A Alkyl hydroperoxidase C 98.0 1.7E-05 5.7E-10 68.0 9.3 94 135-231 44-170 (195)
152 2r2j_A Thioredoxin domain-cont 98.0 2.4E-05 8.1E-10 74.4 11.2 100 122-232 12-118 (382)
153 1zof_A Alkyl hydroperoxide-red 98.0 1.3E-05 4.5E-10 68.7 8.4 93 135-230 32-160 (198)
154 1xvw_A Hypothetical protein RV 98.0 9.9E-06 3.4E-10 66.5 7.3 90 135-231 34-156 (160)
155 4fo5_A Thioredoxin-like protei 98.0 4.6E-06 1.6E-10 67.4 5.2 82 135-226 31-140 (143)
156 3dwv_A Glutathione peroxidase- 98.0 1.6E-05 5.4E-10 67.8 8.8 96 135-233 45-185 (187)
157 1we0_A Alkyl hydroperoxide red 98.0 1.8E-05 6.2E-10 67.2 9.1 95 135-232 30-158 (187)
158 2cvb_A Probable thiol-disulfid 98.0 1E-05 3.6E-10 68.4 7.4 94 135-235 32-163 (188)
159 3kp8_A Vkorc1/thioredoxin doma 98.0 3.5E-06 1.2E-10 66.4 3.9 85 127-225 3-89 (106)
160 3f8u_A Protein disulfide-isome 98.0 1.4E-05 4.8E-10 77.7 9.0 102 120-231 357-461 (481)
161 3evi_A Phosducin-like protein 98.0 8.8E-06 3E-10 65.6 6.3 99 121-233 9-112 (118)
162 1sji_A Calsequestrin 2, calseq 98.0 2.4E-05 8.3E-10 73.2 10.2 96 123-230 19-121 (350)
163 1ilo_A Conserved hypothetical 98.0 2.7E-05 9.2E-10 56.0 7.9 73 139-225 2-75 (77)
164 3iv4_A Putative oxidoreductase 97.9 4.5E-05 1.5E-09 61.5 9.5 86 132-225 20-110 (112)
165 3uem_A Protein disulfide-isome 97.9 1.8E-05 6.2E-10 73.9 7.9 99 121-233 255-355 (361)
166 2k6v_A Putative cytochrome C o 97.9 2.3E-05 7.7E-10 64.7 7.5 87 135-229 34-171 (172)
167 2obi_A PHGPX, GPX-4, phospholi 97.9 2.4E-05 8.2E-10 66.2 7.8 90 135-227 46-180 (183)
168 3us3_A Calsequestrin-1; calciu 97.9 4.9E-05 1.7E-09 72.0 10.7 101 121-231 19-124 (367)
169 2ywm_A Glutaredoxin-like prote 97.9 4.7E-05 1.6E-09 66.4 9.5 86 134-232 134-221 (229)
170 3kij_A Probable glutathione pe 97.9 7E-05 2.4E-09 63.2 10.1 95 135-232 37-171 (180)
171 2h01_A 2-Cys peroxiredoxin; th 97.9 4.1E-05 1.4E-09 65.3 8.7 93 135-230 30-158 (192)
172 1uul_A Tryparedoxin peroxidase 97.9 3.5E-05 1.2E-09 66.5 8.2 93 135-230 35-164 (202)
173 1zye_A Thioredoxin-dependent p 97.9 4.7E-05 1.6E-09 67.1 9.2 95 135-232 55-186 (220)
174 2djk_A PDI, protein disulfide- 97.8 0.00011 3.7E-09 59.4 10.2 88 134-231 21-115 (133)
175 1a8l_A Protein disulfide oxido 97.8 0.00011 3.6E-09 63.8 10.4 90 134-231 20-113 (226)
176 1z6n_A Hypothetical protein PA 97.8 4E-05 1.4E-09 65.4 7.4 85 134-229 52-141 (167)
177 1qmv_A Human thioredoxin perox 97.8 3E-05 1E-09 66.5 6.5 93 135-230 33-162 (197)
178 2p31_A CL683, glutathione pero 97.8 2.8E-05 9.6E-10 65.8 6.2 92 135-229 48-179 (181)
179 3u5r_E Uncharacterized protein 97.8 6.3E-05 2.2E-09 65.9 8.6 99 135-236 57-192 (218)
180 2i81_A 2-Cys peroxiredoxin; st 97.8 6.6E-05 2.3E-09 65.9 8.7 93 135-230 51-179 (213)
181 2b7k_A SCO1 protein; metalloch 97.8 0.00013 4.3E-09 63.0 10.1 97 135-234 40-182 (200)
182 2gs3_A PHGPX, GPX-4, phospholi 97.8 5.1E-05 1.7E-09 64.4 7.5 92 135-229 48-184 (185)
183 2f8a_A Glutathione peroxidase 97.7 0.00015 5.1E-09 63.4 9.7 94 135-231 46-207 (208)
184 3apo_A DNAJ homolog subfamily 97.7 3.1E-05 1E-09 80.0 5.7 98 122-230 123-220 (780)
185 2ls5_A Uncharacterized protein 96.9 5.8E-06 2E-10 67.8 0.0 95 129-226 26-143 (159)
186 2b5e_A Protein disulfide-isome 97.7 4.8E-05 1.6E-09 74.5 6.5 98 122-231 365-467 (504)
187 1oai_A Nuclear RNA export fact 97.6 7.8E-05 2.7E-09 53.4 5.6 45 3-48 2-46 (59)
188 3qcp_A QSOX from trypanosoma b 97.6 0.0001 3.5E-09 72.9 8.0 99 123-231 31-152 (470)
189 3ga4_A Dolichyl-diphosphooligo 97.6 0.00031 1E-08 60.9 9.9 89 107-205 9-113 (178)
190 1xzo_A BSSCO, hypothetical pro 97.6 0.0003 1E-08 58.1 9.5 93 135-231 32-172 (174)
191 1z96_A DNA-damage, UBA-domain 97.6 9.8E-05 3.4E-09 48.1 4.9 38 7-46 3-40 (40)
192 2hls_A Protein disulfide oxido 97.6 0.00035 1.2E-08 62.5 10.3 87 135-232 137-227 (243)
193 3ztl_A Thioredoxin peroxidase; 97.6 0.00012 4E-09 64.5 6.9 90 135-227 68-194 (222)
194 2jsy_A Probable thiol peroxida 97.5 0.00034 1.2E-08 57.8 9.1 91 135-230 43-166 (167)
195 3gkn_A Bacterioferritin comigr 97.5 0.0003 1E-08 57.7 8.7 93 135-231 34-158 (163)
196 3apo_A DNAJ homolog subfamily 97.5 0.00013 4.5E-09 75.2 7.1 117 108-233 649-769 (780)
197 1wj7_A Hypothetical protein (R 97.5 0.00015 5.2E-09 57.5 5.4 42 7-49 38-79 (104)
198 2lus_A Thioredoxion; CR-Trp16, 96.5 2.1E-05 7.1E-10 62.8 0.0 75 134-212 23-124 (143)
199 3a2v_A Probable peroxiredoxin; 97.4 0.00039 1.3E-08 63.1 8.3 93 135-230 32-161 (249)
200 4gqc_A Thiol peroxidase, perox 97.4 0.00074 2.5E-08 56.6 9.1 96 134-232 31-161 (164)
201 2jp7_A MRNA export factor MEX6 97.4 0.00019 6.4E-09 51.1 4.4 44 4-48 2-45 (57)
202 1xvq_A Thiol peroxidase; thior 97.3 0.00052 1.8E-08 57.7 7.6 74 135-215 43-147 (175)
203 2ywm_A Glutaredoxin-like prote 97.3 0.0013 4.4E-08 57.1 10.1 88 134-231 18-115 (229)
204 2c0g_A ERP29 homolog, windbeut 97.3 0.0015 5E-08 59.3 10.3 97 121-231 22-132 (248)
205 2i3y_A Epididymal secretory gl 97.3 0.0027 9.2E-08 56.0 11.8 35 197-232 178-212 (215)
206 2qc7_A ERP31, ERP28, endoplasm 97.2 0.0013 4.3E-08 59.4 9.5 96 121-229 11-117 (240)
207 2c0d_A Thioredoxin peroxidase 97.2 0.0016 5.6E-08 57.4 9.9 93 135-230 55-183 (221)
208 4g2e_A Peroxiredoxin; redox pr 97.2 0.0014 4.8E-08 54.2 8.8 90 135-227 29-154 (157)
209 2r37_A Glutathione peroxidase 97.2 0.0035 1.2E-07 54.8 11.5 35 197-232 160-194 (207)
210 2pn8_A Peroxiredoxin-4; thiore 97.1 0.0015 5.1E-08 57.0 8.7 93 135-230 47-176 (211)
211 3ixr_A Bacterioferritin comigr 97.1 0.0021 7.2E-08 54.2 9.4 92 135-229 50-176 (179)
212 2a4v_A Peroxiredoxin DOT5; yea 97.1 0.0024 8.2E-08 52.3 9.4 93 135-232 34-155 (159)
213 1n8j_A AHPC, alkyl hydroperoxi 97.1 0.003 1E-07 53.7 10.3 94 135-231 29-156 (186)
214 2e7p_A Glutaredoxin; thioredox 97.1 0.00094 3.2E-08 51.7 6.0 68 136-215 19-89 (116)
215 2yzh_A Probable thiol peroxida 97.0 0.0038 1.3E-07 51.8 10.0 87 135-229 46-170 (171)
216 3uem_A Protein disulfide-isome 97.0 0.0039 1.4E-07 57.9 11.0 108 114-232 116-231 (361)
217 3me7_A Putative uncharacterize 97.0 0.0026 8.8E-08 53.2 8.7 98 135-235 27-166 (170)
218 3qpm_A Peroxiredoxin; oxidored 96.9 0.0017 5.9E-08 58.0 7.2 91 135-228 76-203 (240)
219 1wji_A Tudor domain containing 96.9 0.0032 1.1E-07 45.5 7.2 42 7-50 8-49 (63)
220 1dv0_A DNA repair protein HHR2 96.9 0.00058 2E-08 46.5 3.1 42 6-49 2-43 (47)
221 4hde_A SCO1/SENC family lipopr 96.9 0.0096 3.3E-07 49.9 11.0 92 135-230 31-169 (170)
222 4f9z_D Endoplasmic reticulum r 96.8 0.016 5.6E-07 50.6 12.8 108 121-231 116-225 (227)
223 1vg5_A RSGI RUH-014, rhomboid 96.8 0.0016 5.4E-08 48.5 5.2 44 5-50 26-69 (73)
224 4gew_A 5'-tyrosyl-DNA phosphod 96.8 0.00056 1.9E-08 64.9 3.4 41 8-49 45-85 (362)
225 3tjj_A Peroxiredoxin-4; thiore 96.8 0.0019 6.3E-08 58.5 6.6 91 135-228 90-217 (254)
226 1ify_A HHR23A, UV excision rep 96.8 0.0015 5.3E-08 44.7 4.6 41 6-48 6-46 (49)
227 2dah_A Ubiquilin-3; UBA domain 96.8 0.0023 7.7E-08 44.9 5.5 42 8-50 9-50 (54)
228 2g3q_A Protein YBL047C; endocy 96.8 0.0024 8.3E-08 42.3 5.3 39 8-48 4-42 (43)
229 2knz_A Ubiquilin-4; cytoplasm, 96.8 0.0027 9.1E-08 44.2 5.6 41 8-49 11-51 (53)
230 1wjk_A C330018D20RIK protein; 96.7 0.0015 5.3E-08 50.3 4.4 81 136-230 15-95 (100)
231 1veg_A NEDD8 ultimate buster-1 96.7 0.0025 8.6E-08 48.6 5.3 41 8-50 29-69 (83)
232 2bwb_A Ubiquitin-like protein 96.6 0.0032 1.1E-07 42.6 5.1 39 8-47 7-45 (46)
233 1eej_A Thiol:disulfide interch 96.6 0.0037 1.3E-07 54.6 6.9 86 134-231 84-211 (216)
234 1psq_A Probable thiol peroxida 96.6 0.017 5.9E-07 47.4 10.4 87 135-228 41-162 (163)
235 3p7x_A Probable thiol peroxida 96.5 0.011 3.6E-07 48.9 8.9 86 135-227 45-164 (166)
236 2jy5_A Ubiquilin-1; UBA, alter 96.4 0.0045 1.6E-07 42.9 5.0 40 8-48 12-51 (52)
237 1ttz_A Conserved hypothetical 96.4 0.0025 8.6E-08 48.4 4.0 76 140-232 3-78 (87)
238 1v58_A Thiol:disulfide interch 96.4 0.0069 2.4E-07 53.9 7.5 93 133-233 94-235 (241)
239 3gyk_A 27KDA outer membrane pr 96.4 0.019 6.5E-07 47.5 9.5 86 133-231 19-173 (175)
240 1wgn_A UBAP1, ubiquitin associ 96.4 0.0061 2.1E-07 43.7 5.3 45 4-50 15-59 (63)
241 1wr1_B Ubiquitin-like protein 96.3 0.0059 2E-07 43.4 5.1 39 9-48 18-56 (58)
242 3kp9_A Vkorc1/thioredoxin doma 96.3 0.0019 6.6E-08 60.0 3.0 88 122-225 185-274 (291)
243 1vej_A Riken cDNA 4931431F19; 96.2 0.0091 3.1E-07 44.5 6.1 42 8-50 29-70 (74)
244 2l2d_A OTU domain-containing p 96.2 0.0069 2.4E-07 43.7 5.1 43 4-47 13-55 (73)
245 2cwb_A Chimera of immunoglobul 96.2 0.0079 2.7E-07 48.0 5.6 41 9-50 67-107 (108)
246 1wiv_A UBP14, ubiquitin-specif 96.1 0.011 3.6E-07 43.9 5.9 42 7-50 28-69 (73)
247 1q98_A Thiol peroxidase, TPX; 96.1 0.0071 2.4E-07 50.0 5.4 74 135-215 42-148 (165)
248 3zrd_A Thiol peroxidase; oxido 96.0 0.019 6.5E-07 49.5 8.1 85 135-226 77-199 (200)
249 2hls_A Protein disulfide oxido 96.0 0.025 8.7E-07 50.2 9.2 86 133-231 22-117 (243)
250 2dkl_A Trinucleotide repeat co 96.0 0.01 3.6E-07 45.3 5.6 40 9-50 22-61 (85)
251 1tp9_A Peroxiredoxin, PRX D (t 96.0 0.021 7.1E-07 47.1 7.8 78 135-216 34-146 (162)
252 1nm3_A Protein HI0572; hybrid, 95.8 0.03 1E-06 49.1 8.6 89 135-227 32-163 (241)
253 2dak_A Ubiquitin carboxyl-term 95.8 0.0091 3.1E-07 42.9 4.3 43 6-50 7-49 (63)
254 2v2g_A Peroxiredoxin 6; oxidor 95.8 0.029 9.8E-07 50.0 8.3 92 136-230 28-164 (233)
255 1t3b_A Thiol:disulfide interch 95.7 0.03 1E-06 48.6 7.9 82 134-227 84-207 (211)
256 4eo3_A Bacterioferritin comigr 95.6 0.055 1.9E-06 50.5 9.8 87 135-231 23-139 (322)
257 1hyu_A AHPF, alkyl hydroperoxi 95.6 0.075 2.5E-06 52.3 11.3 80 135-228 116-197 (521)
258 3keb_A Probable thiol peroxida 95.5 0.16 5.5E-06 45.2 11.9 87 135-233 47-178 (224)
259 2dna_A Unnamed protein product 95.4 0.043 1.5E-06 40.1 6.4 42 9-51 20-61 (67)
260 2cp8_A NEXT to BRCA1 gene 1 pr 95.3 0.029 1E-06 39.2 5.1 46 5-51 5-51 (54)
261 2ooa_A E3 ubiquitin-protein li 95.3 0.034 1.2E-06 38.5 5.3 37 9-47 12-48 (52)
262 1jkg_B TAP; NTF2-like domain, 95.3 0.003 1E-07 57.3 0.0 46 4-50 194-239 (250)
263 2k8s_A Thioredoxin; dimer, str 95.2 0.028 9.5E-07 40.7 5.0 60 140-210 4-66 (80)
264 2dai_A Ubadc1, ubiquitin assoc 95.2 0.042 1.4E-06 41.7 6.1 41 8-50 29-69 (83)
265 1whc_A RSGI RUH-027, UBA/UBX 3 95.1 0.033 1.1E-06 40.1 5.1 41 8-50 9-50 (64)
266 2fgx_A Putative thioredoxin; N 95.1 0.034 1.2E-06 43.9 5.7 76 138-226 30-106 (107)
267 1prx_A HORF6; peroxiredoxin, h 95.0 0.15 5E-06 44.8 10.2 91 137-230 32-168 (224)
268 3sbc_A Peroxiredoxin TSA1; alp 94.9 0.13 4.6E-06 45.5 9.5 92 135-229 51-179 (216)
269 2cpw_A CBL-interacting protein 94.8 0.042 1.4E-06 39.6 5.0 40 9-50 20-60 (64)
270 1otr_A Protein CUE2; protein-p 94.8 0.051 1.7E-06 37.2 5.1 43 7-49 3-45 (49)
271 2d9s_A CBL E3 ubiquitin protei 94.8 0.054 1.8E-06 37.6 5.2 40 8-49 9-48 (53)
272 2ekk_A UBA domain from E3 ubiq 94.7 0.046 1.6E-06 36.7 4.6 39 7-48 8-46 (47)
273 2cp9_A EF-TS, EF-TSMT, elongat 94.6 0.035 1.2E-06 40.2 4.0 40 9-49 10-49 (64)
274 2dag_A Ubiquitin carboxyl-term 94.5 0.053 1.8E-06 40.2 5.0 42 7-50 8-50 (74)
275 3uma_A Hypothetical peroxiredo 94.5 0.12 4E-06 44.1 7.9 86 135-225 55-183 (184)
276 1vdl_A Ubiquitin carboxyl-term 94.2 0.16 5.4E-06 37.7 6.9 42 8-49 24-65 (80)
277 3mng_A Peroxiredoxin-5, mitoch 94.1 0.18 6.3E-06 42.5 8.3 76 135-215 42-155 (173)
278 3tue_A Tryparedoxin peroxidase 94.0 0.26 8.8E-06 43.7 9.3 96 135-233 55-189 (219)
279 3h93_A Thiol:disulfide interch 93.7 0.19 6.4E-06 42.2 7.6 42 187-232 144-185 (192)
280 1vek_A UBP14, ubiquitin-specif 93.3 0.13 4.3E-06 39.1 5.2 41 8-50 29-70 (84)
281 1wgl_A TOLL-interacting protei 93.3 0.18 6.2E-06 35.7 5.7 43 8-50 9-51 (59)
282 1ego_A Glutaredoxin; electron 93.1 0.25 8.5E-06 35.4 6.5 73 140-228 3-81 (85)
283 2wfc_A Peroxiredoxin 5, PRDX5; 93.0 0.16 5.4E-06 42.4 5.9 55 135-191 30-88 (167)
284 2pwj_A Mitochondrial peroxired 92.9 0.33 1.1E-05 40.4 7.8 54 137-192 45-101 (171)
285 1xcc_A 1-Cys peroxiredoxin; un 92.4 0.3 1E-05 42.6 7.3 92 136-230 30-165 (220)
286 2lbc_A Ubiquitin carboxyl-term 91.8 0.21 7.4E-06 40.2 5.1 41 8-50 78-118 (126)
287 3hd5_A Thiol:disulfide interch 91.5 0.6 2.1E-05 39.1 7.8 39 135-179 24-65 (195)
288 2crn_A Ubash3A protein; compac 91.3 0.29 9.9E-06 35.1 4.7 41 8-50 9-50 (64)
289 4ae4_A Ubiquitin-associated pr 91.2 0.28 9.4E-06 39.5 5.1 40 9-50 77-116 (118)
290 2cq9_A GLRX2 protein, glutared 91.1 0.79 2.7E-05 36.5 7.7 76 123-211 14-92 (130)
291 2znm_A Thiol:disulfide interch 91.1 1.6 5.5E-05 36.2 10.1 41 186-232 141-181 (195)
292 3gv1_A Disulfide interchange p 90.2 0.066 2.2E-06 44.3 0.5 45 184-234 98-142 (147)
293 3bj5_A Protein disulfide-isome 89.7 2 6.9E-05 35.0 9.3 63 169-232 62-128 (147)
294 2lva_A Ubiquitin carboxyl-term 89.1 0.066 2.3E-06 43.4 0.0 43 7-49 17-59 (129)
295 1fov_A Glutaredoxin 3, GRX3; a 88.7 2.9 9.9E-05 29.3 8.5 75 141-236 4-78 (82)
296 3rhb_A ATGRXC5, glutaredoxin-C 88.6 1.7 5.9E-05 33.1 7.7 75 123-210 6-84 (113)
297 3c1r_A Glutaredoxin-1; oxidize 87.3 1.1 3.6E-05 35.1 5.8 77 119-210 8-93 (118)
298 2ht9_A Glutaredoxin-2; thiored 87.2 1.8 6E-05 35.4 7.3 73 125-210 38-113 (146)
299 4ae4_A Ubiquitin-associated pr 86.9 1.1 3.6E-05 36.0 5.6 45 3-49 3-47 (118)
300 2dhy_A CUE domain-containing p 86.7 1 3.4E-05 32.7 4.8 43 7-49 17-59 (67)
301 1kte_A Thioltransferase; redox 86.4 1.7 5.7E-05 32.4 6.3 60 140-210 14-79 (105)
302 3ic4_A Glutaredoxin (GRX-1); s 86.4 3.8 0.00013 29.6 8.1 69 143-226 17-90 (92)
303 2juj_A E3 ubiquitin-protein li 86.2 1.4 4.7E-05 30.7 5.0 44 5-50 4-47 (56)
304 1r7h_A NRDH-redoxin; thioredox 85.9 5.2 0.00018 27.3 8.3 65 140-224 3-71 (75)
305 2lqo_A Putative glutaredoxin R 85.6 3.1 0.00011 31.4 7.4 70 144-230 10-83 (92)
306 2yan_A Glutaredoxin-3; oxidore 85.5 3 0.0001 31.4 7.4 67 129-210 10-83 (105)
307 2oo9_A E3 ubiquitin-protein li 83.3 2.5 8.5E-05 28.3 5.1 39 8-48 4-42 (46)
308 2hze_A Glutaredoxin-1; thiored 83.2 2.4 8.3E-05 32.5 6.0 63 140-210 21-86 (114)
309 2rem_A Disulfide oxidoreductas 83.2 8.6 0.00029 31.5 9.9 40 186-232 146-185 (193)
310 1tr8_A Conserved protein (MTH1 81.9 1.5 5E-05 34.4 4.2 34 9-43 66-99 (102)
311 1h75_A Glutaredoxin-like prote 80.2 4.5 0.00015 28.3 6.1 54 140-203 3-57 (81)
312 3q6o_A Sulfhydryl oxidase 1; p 80.2 8.5 0.00029 33.1 9.1 76 122-211 145-220 (244)
313 1wik_A Thioredoxin-like protei 79.6 5.8 0.0002 30.1 7.0 62 134-210 13-81 (109)
314 2klx_A Glutaredoxin; thioredox 78.9 4.6 0.00016 29.1 6.0 52 140-200 8-60 (89)
315 1aip_C EF-TS, elongation facto 78.7 2 7E-05 37.4 4.4 41 8-49 3-43 (196)
316 1sji_A Calsequestrin 2, calseq 78.6 11 0.00038 34.3 9.8 109 115-231 226-346 (350)
317 2khp_A Glutaredoxin; thioredox 78.5 3.9 0.00013 29.5 5.5 51 140-200 8-61 (92)
318 3msz_A Glutaredoxin 1; alpha-b 77.6 4.1 0.00014 28.9 5.3 71 140-230 6-86 (89)
319 1z6m_A Conserved hypothetical 76.9 16 0.00055 29.4 9.4 34 186-226 140-173 (175)
320 2r2j_A Thioredoxin domain-cont 76.8 7.9 0.00027 35.9 8.3 102 121-231 222-329 (382)
321 1xb2_B EF-TS, elongation facto 74.1 2.7 9.3E-05 38.8 4.2 39 8-47 4-42 (291)
322 2wci_A Glutaredoxin-4; redox-a 73.8 8.3 0.00028 31.1 6.7 70 124-209 23-100 (135)
323 2in3_A Hypothetical protein; D 73.7 11 0.00037 31.5 7.8 48 185-234 166-213 (216)
324 3kzq_A Putative uncharacterize 71.8 13 0.00043 31.3 7.7 45 186-232 160-204 (208)
325 3us3_A Calsequestrin-1; calciu 71.7 12 0.0004 34.7 8.0 94 136-232 247-349 (367)
326 4f82_A Thioredoxin reductase; 71.6 7.2 0.00025 33.0 6.0 45 136-183 47-95 (176)
327 1oqy_A HHR23A, UV excision rep 71.0 2 7E-05 40.8 2.7 42 7-50 167-208 (368)
328 3ctg_A Glutaredoxin-2; reduced 70.3 8 0.00028 30.6 5.7 71 125-210 26-105 (129)
329 2qho_B E3 ubiquitin-protein li 69.4 11 0.00037 25.6 5.2 44 6-49 7-50 (53)
330 3nzn_A Glutaredoxin; structura 68.0 24 0.00081 26.1 7.8 72 141-226 25-101 (103)
331 3gx8_A Monothiol glutaredoxin- 67.5 19 0.00064 28.1 7.3 63 127-201 7-80 (121)
332 2h8l_A Protein disulfide-isome 66.7 16 0.00054 31.7 7.4 57 172-232 169-231 (252)
333 3h8q_A Thioredoxin reductase 3 66.4 22 0.00074 27.0 7.4 70 125-210 6-81 (114)
334 3qmx_A Glutaredoxin A, glutare 66.1 14 0.00047 27.7 6.1 59 141-210 19-78 (99)
335 4dvc_A Thiol:disulfide interch 65.6 13 0.00043 29.9 6.2 43 185-231 140-182 (184)
336 1xiy_A Peroxiredoxin, pfaop; a 64.7 10 0.00035 32.1 5.5 46 135-183 42-92 (182)
337 2di0_A Activating signal coint 63.8 17 0.00058 26.5 5.8 44 6-49 11-54 (71)
338 2wem_A Glutaredoxin-related pr 62.9 15 0.00053 28.6 6.0 66 124-201 8-82 (118)
339 3ipz_A Monothiol glutaredoxin- 60.6 27 0.00092 26.4 6.9 66 125-201 7-79 (109)
340 2cos_A Serine/threonine protei 60.3 11 0.00037 26.1 3.9 41 5-47 6-47 (54)
341 1p3q_Q VPS9P, vacuolar protein 56.4 5.4 0.00018 27.6 1.9 41 7-47 11-51 (54)
342 3q8g_A CRAL-TRIO domain-contai 55.3 18 0.00061 33.2 5.9 45 3-47 34-84 (320)
343 3feu_A Putative lipoprotein; a 55.3 18 0.00061 30.1 5.4 44 184-231 141-184 (185)
344 2xhf_A Peroxiredoxin 5; oxidor 54.1 21 0.00071 29.8 5.6 56 135-192 41-99 (171)
345 3f4s_A Alpha-DSBA1, putative u 52.9 27 0.00094 30.2 6.4 48 185-233 160-213 (226)
346 3l4n_A Monothiol glutaredoxin- 52.1 42 0.0014 26.5 6.9 62 128-201 6-76 (127)
347 1aua_A Phosphatidylinositol tr 51.9 24 0.00082 31.4 6.1 44 4-47 26-75 (296)
348 2lbc_A Ubiquitin carboxyl-term 49.4 17 0.00059 28.7 4.2 40 9-50 4-44 (126)
349 3hz8_A Thiol:disulfide interch 47.6 15 0.00053 30.6 3.8 40 136-181 24-66 (193)
350 2p9m_A Hypothetical protein MJ 47.5 42 0.0014 25.2 6.1 109 115-228 17-136 (138)
351 1r5l_A Alpha-TTP, protein (alp 46.6 11 0.00037 32.9 2.7 45 3-47 3-56 (262)
352 1olm_A SEC14-like protein 2; l 46.5 30 0.001 32.3 6.0 45 3-47 7-58 (403)
353 1un2_A DSBA, thiol-disulfide i 45.2 6.8 0.00023 33.3 1.2 55 136-190 113-170 (197)
354 3gmf_A Protein-disulfide isome 44.2 48 0.0017 28.1 6.5 43 186-235 158-201 (205)
355 2o16_A Acetoin utilization pro 43.1 70 0.0024 25.1 7.0 65 159-232 75-139 (160)
356 3zyw_A Glutaredoxin-3; metal b 42.1 73 0.0025 24.1 6.7 65 125-201 5-77 (111)
357 4gqw_A CBS domain-containing p 41.1 62 0.0021 24.5 6.2 104 119-230 20-145 (152)
358 3tdg_A DSBG, putative uncharac 40.0 10 0.00036 34.5 1.6 41 134-177 145-185 (273)
359 2ct6_A SH3 domain-binding glut 39.1 60 0.0021 24.5 5.7 57 139-200 10-77 (111)
360 3gha_A Disulfide bond formatio 38.8 57 0.002 27.3 6.1 41 185-232 153-193 (202)
361 1t1v_A SH3BGRL3, SH3 domain-bi 38.1 65 0.0022 23.1 5.6 58 139-201 4-66 (93)
362 1aba_A Glutaredoxin; electron 37.5 54 0.0018 23.2 5.0 45 147-201 13-70 (87)
363 3t58_A Sulfhydryl oxidase 1; o 37.5 34 0.0012 33.6 5.0 83 134-232 155-237 (519)
364 3lqn_A CBS domain protein; csg 37.3 25 0.00086 27.2 3.3 105 118-233 29-148 (150)
365 1yav_A Hypothetical protein BS 36.2 52 0.0018 25.6 5.2 104 119-232 29-146 (159)
366 3c7m_A Thiol:disulfide interch 36.0 23 0.0008 28.7 3.1 42 186-231 153-194 (195)
367 3bci_A Disulfide bond protein 35.1 48 0.0016 26.9 4.9 40 185-231 139-178 (186)
368 3sl7_A CBS domain-containing p 34.8 87 0.003 24.5 6.4 66 161-234 97-162 (180)
369 3hz8_A Thiol:disulfide interch 34.5 74 0.0025 26.2 6.0 42 184-232 143-184 (193)
370 1u6t_A SH3 domain-binding glut 32.8 1E+02 0.0034 24.4 6.2 58 139-201 2-70 (121)
371 1q02_A Sequestosome 1; helical 32.0 31 0.0011 23.6 2.5 36 8-45 10-47 (52)
372 4dbg_B Ring finger protein 31; 31.9 37 0.0013 28.6 3.5 36 8-44 102-137 (162)
373 3fv6_A YQZB protein; CBS domai 31.8 40 0.0014 26.5 3.8 117 114-236 24-152 (159)
374 3ihp_A Ubiquitin carboxyl-term 31.3 46 0.0016 34.8 5.0 41 7-49 719-759 (854)
375 1pbj_A Hypothetical protein; s 31.2 83 0.0028 23.0 5.3 100 118-227 13-121 (125)
376 2yzi_A Hypothetical protein PH 30.9 34 0.0012 25.8 3.1 105 116-230 17-131 (138)
377 2h8l_A Protein disulfide-isome 30.7 2.5E+02 0.0085 23.8 9.7 92 125-233 14-111 (252)
378 3l9v_A Putative thiol-disulfid 29.0 38 0.0013 27.9 3.3 46 137-182 15-62 (189)
379 3kxr_A Magnesium transporter, 28.9 62 0.0021 27.1 4.7 102 122-231 70-177 (205)
380 1nm3_A Protein HI0572; hybrid, 27.7 1.3E+02 0.0043 25.4 6.5 67 123-201 153-225 (241)
381 2axo_A Hypothetical protein AT 27.4 1.3E+02 0.0043 27.2 6.6 81 139-232 45-144 (270)
382 4fry_A Putative signal-transdu 27.0 1.1E+02 0.0037 23.6 5.5 101 117-228 24-135 (157)
383 1vkf_A Glycerol uptake operon 25.6 51 0.0017 28.3 3.4 72 123-204 43-114 (188)
384 2ef7_A Hypothetical protein ST 25.4 65 0.0022 24.0 3.8 103 119-231 17-128 (133)
385 3l9v_A Putative thiol-disulfid 24.4 1.7E+02 0.0058 23.8 6.6 42 185-230 135-182 (189)
386 2hc5_A ORF 99, hypothetical pr 24.3 93 0.0032 24.5 4.5 29 196-228 68-96 (117)
387 2j9l_A Chloride channel protei 23.6 94 0.0032 24.5 4.7 63 160-231 106-168 (185)
388 1y5h_A Hypothetical protein RV 23.5 79 0.0027 23.5 4.0 102 115-226 17-129 (133)
389 3gn3_A Putative protein-disulf 23.5 69 0.0023 26.5 3.9 38 185-226 144-181 (182)
390 2bkf_A Zinc-finger protein NBR 23.2 56 0.0019 24.7 2.8 31 115-145 56-86 (87)
391 2l4c_A Endoplasmic reticulum r 22.7 2.6E+02 0.009 21.5 10.2 101 114-233 18-122 (124)
392 1wj6_A KIAA0049 protein, RSGI 22.7 61 0.0021 25.1 3.0 31 116-146 65-95 (101)
393 3ctu_A CBS domain protein; str 22.2 27 0.00091 27.3 1.0 106 119-234 30-148 (156)
394 2nyc_A Nuclear protein SNF4; b 21.8 2E+02 0.0068 21.3 6.1 104 115-227 20-140 (144)
395 3gl5_A Putative DSBA oxidoredu 21.4 1.7E+02 0.0059 25.0 6.2 42 186-233 174-215 (239)
396 2wfc_A Peroxiredoxin 5, PRDX5; 21.4 85 0.0029 25.3 3.9 58 162-226 79-159 (167)
397 3lhh_A CBS domain protein; str 21.1 1E+02 0.0035 24.5 4.4 97 122-228 60-164 (172)
398 2rc3_A CBS domain; in SITU pro 21.0 48 0.0016 24.9 2.2 101 117-227 20-130 (135)
399 3nqr_A Magnesium and cobalt ef 21.0 2E+02 0.0069 21.1 5.9 97 120-226 19-124 (127)
400 3feu_A Putative lipoprotein; a 20.8 53 0.0018 27.1 2.6 40 136-178 22-61 (185)
401 2emq_A Hypothetical conserved 20.8 78 0.0027 24.3 3.5 103 119-231 26-142 (157)
402 2j9w_A VPS28, VPS28-PROV prote 20.2 52 0.0018 25.5 2.2 25 20-48 75-99 (102)
403 2j9u_A VPS28, vacuolar protein 20.2 53 0.0018 25.2 2.2 24 20-47 70-93 (96)
No 1
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=100.00 E-value=2.7e-33 Score=239.64 Aligned_cols=134 Identities=40% Similarity=0.788 Sum_probs=128.0
Q ss_pred CCcchHHHHhhhhCCCccccccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCC
Q 021955 101 TTDTSHDILASLYRPPFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDD 180 (305)
Q Consensus 101 ~~~~~~~~la~lFrPP~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~d 180 (305)
..+++.++|+.+|+||+.|+|.++|++|++.||+++|||||+|+++||++|++|+|+||+|++|+++|++|||+|+++++
T Consensus 7 ~~~~~~~~l~~lf~~p~~~~~~~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~ 86 (153)
T 2dlx_A 7 GIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHD 86 (153)
T ss_dssp CCCCCCCCCCCTTSCCTTTSCCSCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESS
T ss_pred CCCchhhHHHHhhCCchhhhcccCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecC
Confidence 45667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCCC
Q 021955 181 TSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSPR 235 (305)
Q Consensus 181 s~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~~~ 235 (305)
++++..|++.|++..+|+++||||+||+.+.+|.| +++++|++.|..|++++.-
T Consensus 87 ~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~~l~~~~~ 140 (153)
T 2dlx_A 87 SEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTGFLGEHGQ 140 (153)
T ss_dssp SHHHHHHHHHHTCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHHHHHHTCS
T ss_pred CHhHHHHHHHcCCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999998999998977 8999999999999998753
No 2
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.96 E-value=5.2e-30 Score=224.46 Aligned_cols=134 Identities=21% Similarity=0.184 Sum_probs=123.6
Q ss_pred CcchHHHHhhhhCCCccccccccHHHHHHHH----HHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEe
Q 021955 102 TDTSHDILASLYRPPFHVMFNGSFEKAKDAA----LAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQE 177 (305)
Q Consensus 102 ~~~~~~~la~lFrPP~~l~~~gsf~~A~~~A----k~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~ 177 (305)
+..|.+.|++.|+++++.||.|+|++|++.| |+++||||||||+++|++|+.|||+||+|++|++||++|||+|++
T Consensus 17 ~~~F~~~f~~~yg~~~p~F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~ 96 (178)
T 2ec4_A 17 LLQFTAEFSSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAW 96 (178)
T ss_dssp HHHHHHHHHHHHCSCCCCCCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHhCCCCCCeeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEE
Confidence 5678999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred cCCChh-------------HHHHHHh---cCCCCCceEEEEeCCCC--eeEEEecCCCChHHHHHHHHHHHhhCCC
Q 021955 178 YDDTSE-------------GWKVCSF---YNMDSIPAVLVIDPITG--QKICSWCGMINPQPLGEMLLPFMDRSPR 235 (305)
Q Consensus 178 ~~ds~e-------------g~~~~~~---Y~~~~~P~i~IIdprTG--e~~~~~~G~~~~~~~l~~L~~fl~~~~~ 235 (305)
|+++++ |.++++. |++..||+++||+++.+ +.+.++.|.+++++|++.|.++++++..
T Consensus 97 dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~e~~~~ 172 (178)
T 2ec4_A 97 DLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAMEIFTA 172 (178)
T ss_dssp ECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHHHHHH
T ss_pred eCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHHHHhhH
Confidence 999999 5566665 89999999999998643 4577799999999999999999998753
No 3
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.56 E-value=1.2e-14 Score=123.07 Aligned_cols=113 Identities=12% Similarity=0.167 Sum_probs=100.4
Q ss_pred cccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHH--------------
Q 021955 120 MFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGW-------------- 185 (305)
Q Consensus 120 ~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~-------------- 185 (305)
....+|++++..|+.++|++||+++.+||.+|+.|.+.+|.++.+.++++++|+|..++.+.....
T Consensus 31 ~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~ 110 (172)
T 3f9u_A 31 AKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTERT 110 (172)
T ss_dssp CCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEEEE
T ss_pred cchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchhhh
Confidence 346789999999999999999999999999999999999999999999999999999998754311
Q ss_pred ----------HHHHhcCCCCCceEEEEeCCCCeeEEEecCCCC-hHHHHHHHHHHHhhC
Q 021955 186 ----------KVCSFYNMDSIPAVLVIDPITGQKICSWCGMIN-PQPLGEMLLPFMDRS 233 (305)
Q Consensus 186 ----------~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~-~~~~l~~L~~fl~~~ 233 (305)
-.+..|++..+|+++|||+ .|+.+..+.|..+ +++|++.|.+.++++
T Consensus 111 ~~~~~~~~~~~~~~~~~v~~~Pt~~lid~-~G~~~~~~~G~~~~~~~l~~~l~~~l~~~ 168 (172)
T 3f9u_A 111 LRTVGDKWSYLQRVKFGANAQPFYVLIDN-EGNPLNKSYAYDEDISKYINFLQTGLENY 168 (172)
T ss_dssp EEEHHHHHHHHHHHHHSCCCSSEEEEECT-TSCBSSCCBCSCCCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHHcCCCCcceEEEECC-CCCEEeeccCCCCCHHHHHHHHHHHHHHh
Confidence 1168899999999999997 6999988899987 999999999988764
No 4
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.50 E-value=2.2e-13 Score=109.40 Aligned_cols=110 Identities=19% Similarity=0.223 Sum_probs=101.6
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEE
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~ 200 (305)
...+|++++..|+.++|++||++.++||..|+.+...++.++.+.++++.+|+++.++.+..+...+++.|++..+|+++
T Consensus 12 ~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~ 91 (130)
T 2kuc_A 12 RELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLL 91 (130)
T ss_dssp BCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSCEEE
T ss_pred ccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCCEEE
Confidence 46789999999999999999999999999999999999899999999999999999999887788999999999999999
Q ss_pred EEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 201 VIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 201 IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
|+|+ .|+.+..+.|..++++|.+.|...+.
T Consensus 92 ~~d~-~G~~~~~~~G~~~~~~l~~~l~~~~~ 121 (130)
T 2kuc_A 92 FINS-SGEVVYRLVGAEDAPELLKKVKLGVE 121 (130)
T ss_dssp EECT-TSCEEEEEESCCCHHHHHHHHHHHHS
T ss_pred EECC-CCcEEEEecCCCCHHHHHHHHHHHHH
Confidence 9996 69999899999999998888888775
No 5
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.20 E-value=3.9e-15 Score=119.93 Aligned_cols=115 Identities=17% Similarity=0.172 Sum_probs=104.5
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEE
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~ 200 (305)
+..+ ++++..|+.++|++||+++++||..|+.+.+.++.++.+.+.++.+|+|+.++.+..+...+++.|++..+|+++
T Consensus 5 w~~~-~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~ 83 (130)
T 2lst_A 5 WYPY-PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFV 83 (130)
Confidence 4444 899999999999999999999999999999999999999999999999999999888889999999999999999
Q ss_pred EEeCCCCee--EEEecCCCChHHHHHHHHHHHhhCCCC
Q 021955 201 VIDPITGQK--ICSWCGMINPQPLGEMLLPFMDRSPRK 236 (305)
Q Consensus 201 IIdprTGe~--~~~~~G~~~~~~~l~~L~~fl~~~~~~ 236 (305)
|+|+..|+. +..+.|..++++|.+.|...+.+....
T Consensus 84 ~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~~~~~~ 121 (130)
T 2lst_A 84 FLVPKAGAWEEVGRLFGSRPRAEFLKELRQVCVKGGAC 121 (130)
Confidence 999988998 888899999999999998888766544
No 6
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.46 E-value=6.1e-13 Score=111.49 Aligned_cols=107 Identities=10% Similarity=0.143 Sum_probs=98.3
Q ss_pred ccHHHHHHHHHHcCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCCh---------hHHHHHHhcC
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTS---------EGWKVCSFYN 192 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~---------eg~~~~~~Y~ 192 (305)
.+|.+++..|+.++|++||+|. ++||.+|+.+...++.++.+.++.+.+|+++.++.+.. ....+++.|+
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~ 113 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYK 113 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcC
Confidence 7899999999999999999999 89999999999999999999999988999999998763 4668999999
Q ss_pred CCCCceEEEEeCCCCeeEEEecCCC--ChHHHHHHHHHHHh
Q 021955 193 MDSIPAVLVIDPITGQKICSWCGMI--NPQPLGEMLLPFMD 231 (305)
Q Consensus 193 ~~~~P~i~IIdprTGe~~~~~~G~~--~~~~~l~~L~~fl~ 231 (305)
+..+|+++|||+ .|+.+..+ |.. ++++|++.|...+.
T Consensus 114 v~~~Pt~~~~d~-~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 114 VTGFPELVFIDA-EGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp CCSSSEEEEECT-TCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred CCCCCEEEEEcC-CCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 999999999997 69999999 998 89999999988775
No 7
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.45 E-value=1.4e-13 Score=116.83 Aligned_cols=112 Identities=16% Similarity=0.126 Sum_probs=95.7
Q ss_pred ccccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCce
Q 021955 119 VMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (305)
Q Consensus 119 l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~ 198 (305)
|-+..+|++|++.|++++|+|||+++.+||.+|+.|.+.++.++.|.++++.+||...++.+..+ .+..|.+..+|+
T Consensus 27 i~W~~~~~~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~---~~~~~~v~~~PT 103 (151)
T 3ph9_A 27 ITWVQTYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTD---KNLSPDGQYVPR 103 (151)
T ss_dssp SCCCSSHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSC---GGGCTTCCCSSE
T ss_pred CcchhCHHHHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchh---hHhhcCCCCCCE
Confidence 34678999999999999999999999999999999999999999999999989999988754333 356788999999
Q ss_pred EEEEeCCCCeeEEEecCC-------C---ChHHHHHHHHHHHhhCC
Q 021955 199 VLVIDPITGQKICSWCGM-------I---NPQPLGEMLLPFMDRSP 234 (305)
Q Consensus 199 i~IIdprTGe~~~~~~G~-------~---~~~~~l~~L~~fl~~~~ 234 (305)
++++++ .|+.+..+.|. . +.+.+|+.+...++++.
T Consensus 104 ~~f~~~-~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al~~~~ 148 (151)
T 3ph9_A 104 IMFVDP-SLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKALRLIQ 148 (151)
T ss_dssp EEEECT-TSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHHHSCCC
T ss_pred EEEECC-CCCEEEEEeCCcCCcccccchhhHHHHHHHHHHHHHHHh
Confidence 999998 59988888887 3 45677888888877654
No 8
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.38 E-value=1.1e-12 Score=113.90 Aligned_cols=109 Identities=12% Similarity=0.161 Sum_probs=87.2
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhc--------C
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFY--------N 192 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y--------~ 192 (305)
+.-.+++|++.|++++|+|||+|..+||.+|++|.+.+|.+++|.++++++||+..+|.+.. ..+...| +
T Consensus 24 W~~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~--~~l~~~y~~~~q~~~g 101 (173)
T 3ira_A 24 WYPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREER--PDIDNIYMTVCQIILG 101 (173)
T ss_dssp CBCSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTC--HHHHHHHHHHHHHHHS
T ss_pred CCCcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCccc--CcHHHHHHHHHHHHcC
Confidence 55566999999999999999999999999999999999999999999999999999988742 3344444 8
Q ss_pred CCCCceEEEEeCCCCeeEEEec-----CCCChHHHHHHHHHHHhh
Q 021955 193 MDSIPAVLVIDPITGQKICSWC-----GMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 193 ~~~~P~i~IIdprTGe~~~~~~-----G~~~~~~~l~~L~~fl~~ 232 (305)
+..+|+++|++| .|+.+.... |..+...|++.|..+.+.
T Consensus 102 v~g~Pt~v~l~~-dG~~v~~~ty~p~~~~~~~~~f~~~L~~v~~~ 145 (173)
T 3ira_A 102 RGGWPLNIIMTP-GKKPFFAGTYIPKNTRFNQIGMLELVPRIKEI 145 (173)
T ss_dssp CCCSSEEEEECT-TSCEEEEESSCCSSCBTTBCCHHHHHHHHHHH
T ss_pred CCCCcceeeECC-CCCceeeeeeCCCCcCCCCCCHHHHHHHHHHH
Confidence 999999999998 588876622 222334566665555543
No 9
>1v92_A NSFL1 cofactor P47; 3-helix bundle, recombination; NMR {Rattus norvegicus} SCOP: a.5.2.3
Probab=99.34 E-value=1.1e-12 Score=89.66 Aligned_cols=43 Identities=21% Similarity=0.434 Sum_probs=40.2
Q ss_pred hhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021955 6 IDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (305)
Q Consensus 6 ~~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 49 (305)
++++++|.+|++| ||+++++|++||++++|||+.||+.||+.+
T Consensus 3 ~~~~~~i~~F~~i-Tg~~~~~A~~~L~~~~wdle~Ai~~ff~~~ 45 (46)
T 1v92_A 3 EERQDALREFVAV-TGAEEDRARFFLESAGWDLQIALASFYEDG 45 (46)
T ss_dssp THHHHHHHHHHHH-TCCCHHHHHHHHHHTTSCSHHHHHHHHHTC
T ss_pred ccHHHHHHHHHHH-hCcCHHHHHHHHHHcCCCHHHHHHHHHcCC
Confidence 3588999999999 899999999999999999999999999864
No 10
>2dam_A ETEA protein; KIAA0887, UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.32 E-value=1.6e-12 Score=96.20 Aligned_cols=49 Identities=14% Similarity=0.289 Sum_probs=44.5
Q ss_pred CCCCchhhHHHHHhhhccccC-CCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021955 1 MESESIDKESRISSFLEIAVG-ASGVTAIECLQATSWKLDEAILLFFAVNE 50 (305)
Q Consensus 1 m~~~s~~~~~~i~~F~~iTtg-~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 50 (305)
|..++.+++++|.+|++| || ++.++|++||++++||||.||+.||+..+
T Consensus 11 ~~~Ls~~~~e~i~qF~~I-Tg~~d~~~A~~~Le~~~WnLe~Av~~ff~~~~ 60 (67)
T 2dam_A 11 ERDLTQEQTEKLLQFQDL-TGIESMDQCRHTLEQHNWNIEAAVQDRLNEQE 60 (67)
T ss_dssp CCCCCHHHHHHHHHHHHH-HCCSCHHHHHHHHHHHTSCHHHHHHHHHHSSC
T ss_pred hhhcChhHHHHHHHHHHH-hCCCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 445688999999999999 56 99999999999999999999999999765
No 11
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.30 E-value=1.1e-11 Score=100.17 Aligned_cols=104 Identities=18% Similarity=0.205 Sum_probs=88.9
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCC-hhHHHHHHhcCC---CCCce
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT-SEGWKVCSFYNM---DSIPA 198 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds-~eg~~~~~~Y~~---~~~P~ 198 (305)
.+|++++..|+.++|++||+++++||.+|+.+.. +|.++.+.+.++.++.|..++.+. .+...+++.|++ ..+|+
T Consensus 16 ~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~-~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt 94 (133)
T 3fk8_A 16 TQVKKALAAGKRTHKPTLLVFGANWCTDCRALDK-SLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPA 94 (133)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHH-HHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSE
T ss_pred hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH-HhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccce
Confidence 4689999999999999999999999999999987 688889999998899999998843 456689999999 99999
Q ss_pred EEEEeCCCCeeEEEecC-------CCChHHHHHHHHH
Q 021955 199 VLVIDPITGQKICSWCG-------MINPQPLGEMLLP 228 (305)
Q Consensus 199 i~IIdprTGe~~~~~~G-------~~~~~~~l~~L~~ 228 (305)
++++|+ .|+.+....| ..+.+++.+.|..
T Consensus 95 ~~~~d~-~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~ 130 (133)
T 3fk8_A 95 VVVVNS-DGKVRYTTKGGELANARKMSDQGIYDFFAK 130 (133)
T ss_dssp EEEECT-TSCEEEECCSCTTTTGGGSCHHHHHHHHHH
T ss_pred EEEECC-CCCEEEEecCCcccccccCCHHHHHHHHHH
Confidence 999997 6999988887 5566665555544
No 12
>2dal_A Protein KIAA0794; FAS associted factor 1, UBA-like domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=3.8e-12 Score=92.77 Aligned_cols=46 Identities=26% Similarity=0.299 Sum_probs=42.9
Q ss_pred CchhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021955 4 ESIDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (305)
Q Consensus 4 ~s~~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 50 (305)
++..++++|.+||+| ||+++++|++||++++||||.||++||+.++
T Consensus 11 ~s~~~~e~i~qF~~i-Tg~~~~~A~~~Le~~~WnLe~Av~~ff~~~~ 56 (62)
T 2dal_A 11 ASSALKGLIQQFTTI-TGASESVGKHMLEACNNNLEMAVTMFLDGGG 56 (62)
T ss_dssp SCHHHHHHHHHHHHH-TCCCHHHHHHHHHTTTSCHHHHHHHHHHSCC
T ss_pred cCccHHHHHHHHHHH-hCCCHHHHHHHHHHcCCCHHHHHHHHHcCCC
Confidence 467899999999999 8999999999999999999999999999764
No 13
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.29 E-value=1.4e-11 Score=100.36 Aligned_cols=110 Identities=15% Similarity=0.225 Sum_probs=90.8
Q ss_pred CCcc-ccccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCC--hhHHHHHHhc
Q 021955 115 PPFH-VMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT--SEGWKVCSFY 191 (305)
Q Consensus 115 PP~~-l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds--~eg~~~~~~Y 191 (305)
|+|. +--...|..++..++ +|++||+++++||.+|+.+...++.++.+.+.++ ++.|+.++.+. .+...+++.|
T Consensus 11 ~~f~~~~~~~~~~~~l~~~~--~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-~~~~~~vd~~~~~~~~~~l~~~~ 87 (134)
T 2fwh_A 11 LNFTQIKTVDELNQALVEAK--GKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-DTVLLQANVTANDAQDVALLKHL 87 (134)
T ss_dssp CCCEECCSHHHHHHHHHHHT--TSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-TSEEEEEECTTCCHHHHHHHHHT
T ss_pred CCcEEecCHHHHHHHHHHhc--CCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-CcEEEEEeCCCCcchHHHHHHHc
Confidence 5554 333455777776553 8999999999999999999999999999998887 59999998876 5678899999
Q ss_pred CCCCCceEEEEeCCCCeeE--EEecCCCChHHHHHHHHH
Q 021955 192 NMDSIPAVLVIDPITGQKI--CSWCGMINPQPLGEMLLP 228 (305)
Q Consensus 192 ~~~~~P~i~IIdprTGe~~--~~~~G~~~~~~~l~~L~~ 228 (305)
++..+|+++|+|+ .|+.+ ..+.|..++++|.+.|..
T Consensus 88 ~v~~~Pt~~~~d~-~G~~v~~~~~~G~~~~~~l~~~l~~ 125 (134)
T 2fwh_A 88 NVLGLPTILFFDG-QGQEHPQARVTGFMDAETFSAHLRD 125 (134)
T ss_dssp TCCSSSEEEEECT-TSCBCGGGCBCSCCCHHHHHHHHHH
T ss_pred CCCCCCEEEEECC-CCCEeeeeeeeeccCHHHHHHHHHh
Confidence 9999999999996 68887 678999999887666554
No 14
>3e21_A HFAF1, FAS-associated factor 1; UBA, alternative splicing, apoptosis, nucleus, phosphoprotein; 1.73A {Homo sapiens}
Probab=99.26 E-value=2e-12 Score=88.21 Aligned_cols=42 Identities=29% Similarity=0.374 Sum_probs=35.6
Q ss_pred chhhHHHHHhhhccccCCC-HHHHHHHHHHcCCCHHHHHHHHHh
Q 021955 5 SIDKESRISSFLEIAVGAS-GVTAIECLQATSWKLDEAILLFFA 47 (305)
Q Consensus 5 s~~~~~~i~~F~~iTtg~~-~~~A~~~Le~~~wdLe~Av~~ff~ 47 (305)
|.+++++|++|++| ||.+ .++|++||++|||||+.||+.||.
T Consensus 2 ~~d~de~ia~F~~i-TG~~d~~~A~~~Lea~nWDLe~Av~~f~~ 44 (45)
T 3e21_A 2 SMDREMILADFQAC-TGIENIDEAITLLEQNNWDLVAAINGVIP 44 (45)
T ss_dssp -CCHHHHHHHHHHH-HCCCCHHHHHHHHHHTTTCHHHHHTTC--
T ss_pred cccHHHHHHHHHHH-HCCCCHHHHHHHHHHcCCcHHHHHHHHcC
Confidence 34799999999999 5655 699999999999999999999985
No 15
>2dzl_A Protein FAM100B; UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=1.8e-11 Score=90.30 Aligned_cols=49 Identities=24% Similarity=0.436 Sum_probs=42.6
Q ss_pred CCCCchh-hH-HHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021955 1 MESESID-KE-SRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (305)
Q Consensus 1 m~~~s~~-~~-~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 50 (305)
|+-++.+ ++ ++|.+|++| ||+++++|++||++++||||.||+.||+...
T Consensus 8 ~~~~m~~~~~q~~i~qF~~i-Tg~~~~~A~~~Le~~~WdLe~Al~~ff~~~~ 58 (66)
T 2dzl_A 8 MSVNMDELRHQVMINQFVLA-AGCAADQAKQLLQAAHWQFETALSTFFQETN 58 (66)
T ss_dssp CSCCCHHHHHHHHHHHHHHH-HCCCHHHHHHHHHTTTTCHHHHHHHHHTCSC
T ss_pred hhHHhhcCccHHHHHHHHHH-cCCCHHHHHHHHHHcCCCHHHHHHHHHcCCC
Confidence 3445555 55 899999999 8999999999999999999999999998654
No 16
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.02 E-value=2.1e-09 Score=83.30 Aligned_cols=102 Identities=16% Similarity=0.142 Sum_probs=82.2
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEE
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~I 201 (305)
..+|++++..+++.+|++||+++++||..|+.+...+ ..+.+-...++.|+.++.+. ...+++.|++..+|+++|
T Consensus 10 ~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~ 84 (112)
T 1ep7_A 10 KAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLF---ETLSNDYAGKVIFLKVDVDA--VAAVAEAAGITAMPTFHV 84 (112)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTSEEEEEETTT--THHHHHHHTCCBSSEEEE
T ss_pred HHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHH---HHHHHHcCCCeEEEEEECCc--hHHHHHHcCCCcccEEEE
Confidence 4578999998888899999999999999999996543 33444445578899887764 457889999999999877
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 202 IDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 202 IdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
+. .|+.+..+.|. +++++.+.|.+.+.
T Consensus 85 ~~--~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 85 YK--DGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp EE--TTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred EE--CCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 73 69999889998 88888877777653
No 17
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.00 E-value=2.7e-09 Score=85.84 Aligned_cols=101 Identities=11% Similarity=0.163 Sum_probs=81.4
Q ss_pred ccccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCCC
Q 021955 119 VMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSI 196 (305)
Q Consensus 119 l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~~ 196 (305)
|--..+|++++..|+.++|++||+++++||..|+.+.. .+.++.++ ++.|+.++.+. ...+++.|++..+
T Consensus 21 l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~------~l~~l~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~ 92 (124)
T 1xfl_A 21 CHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAP------FFADLAKKLPNVLFLKVDTDE--LKSVASDWAIQAM 92 (124)
T ss_dssp ESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHH------HHHHHHHHCSSEEEEEEETTT--SHHHHHHTTCCSS
T ss_pred eCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHH------HHHHHHHHCCCcEEEEEECcc--CHHHHHHcCCCcc
Confidence 33456789999999999999999999999999999964 44555444 68899887764 4578999999999
Q ss_pred ceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021955 197 PAVLVIDPITGQKICSWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 197 P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl 230 (305)
|+++|+ +.|+.+..+.|. +++++.+.|.+++
T Consensus 93 Pt~~~~--~~G~~~~~~~G~-~~~~l~~~l~~~l 123 (124)
T 1xfl_A 93 PTFMFL--KEGKILDKVVGA-KKDELQSTIAKHL 123 (124)
T ss_dssp SEEEEE--ETTEEEEEEESC-CHHHHHHHHHHHC
T ss_pred CEEEEE--ECCEEEEEEeCC-CHHHHHHHHHHhc
Confidence 998887 369999889994 8888777776654
No 18
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.00 E-value=1.2e-09 Score=87.05 Aligned_cols=99 Identities=10% Similarity=0.169 Sum_probs=81.2
Q ss_pred HHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEE
Q 021955 132 ALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKIC 211 (305)
Q Consensus 132 Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~ 211 (305)
+..++|.+||+++++||..|+.+...+ ..+.+-++.++.|+.++.+..+...+++.|++..+|+++|+++ .|+.+.
T Consensus 22 ~~~~~k~~lv~f~a~wC~~C~~~~~~l---~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~-~G~~~~ 97 (126)
T 2l57_A 22 EAKEGIPTIIMFKTDTCPYCVEMQKEL---SYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDK-EGNKFY 97 (126)
T ss_dssp TCCSSSCEEEEEECSSCHHHHHHHHHH---HHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECT-TCCEEE
T ss_pred HHhCCCcEEEEEECCCCccHHHHHHHH---HHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECC-CCCEEE
Confidence 456789999999999999999997654 4455555567999999855667778999999999999999997 699998
Q ss_pred EecCCCChHHHHHHHHHHHhhCC
Q 021955 212 SWCGMINPQPLGEMLLPFMDRSP 234 (305)
Q Consensus 212 ~~~G~~~~~~~l~~L~~fl~~~~ 234 (305)
.+.|..+.++|.+.|...+...+
T Consensus 98 ~~~G~~~~~~l~~~l~~~~~~~~ 120 (126)
T 2l57_A 98 VHQGLMRKNNIETILNSLGVKEG 120 (126)
T ss_dssp EEESCCCHHHHHHHHHHHCCCCC
T ss_pred EecCCCCHHHHHHHHHHHhcccc
Confidence 99999999988887777765443
No 19
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.98 E-value=2.4e-09 Score=83.61 Aligned_cols=104 Identities=15% Similarity=0.225 Sum_probs=84.3
Q ss_pred cccccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCC
Q 021955 118 HVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDS 195 (305)
Q Consensus 118 ~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~ 195 (305)
.+....+|++++..|+..+|+++|+++++||..|+.+. +.+.++.++ ++.|..++.+. ...++..|++..
T Consensus 10 ~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~------~~l~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~ 81 (118)
T 2vm1_A 10 ACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIA------PVFAEYAKKFPGAIFLKVDVDE--LKDVAEAYNVEA 81 (118)
T ss_dssp ECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHH------HHHHHHHHHCTTSEEEEEETTT--SHHHHHHTTCCS
T ss_pred EecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHh------HHHHHHHHHCCCcEEEEEEccc--CHHHHHHcCCCc
Confidence 33345679999999999999999999999999999995 445555554 68888887664 567889999999
Q ss_pred CceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 196 IPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 196 ~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
+|+++|+. .|+.+..+.| .+++++.+.|.+++..
T Consensus 82 ~Pt~~~~~--~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 82 MPTFLFIK--DGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp BSEEEEEE--TTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred CcEEEEEe--CCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 99998883 6999988899 4888888888887754
No 20
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.97 E-value=2.7e-09 Score=84.32 Aligned_cols=92 Identities=21% Similarity=0.297 Sum_probs=70.9
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh--ccEEEEEecCCChhHHHHHHhcCCCCCceE
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSEGWKVCSFYNMDSIPAV 199 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~--~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i 199 (305)
..+|++++..+ .+|+++|+++++||.+|+.|. +.+.++.+ .+++|+.+|.+ +...+++.|++.++|++
T Consensus 8 ~~~f~~~l~~~--~~k~vvv~F~a~wC~~C~~~~------p~~~~~~~~~~~~~~~~vd~d--~~~~l~~~~~V~~~PT~ 77 (105)
T 3zzx_A 8 QEDFTKQLNEA--GNKLVVIDFYATWCGPCKMIA------PKLEELSQSMSDVVFLKVDVD--ECEDIAQDNQIACMPTF 77 (105)
T ss_dssp HHHHHHHHHHT--TTSEEEEEEECTTCHHHHHHH------HHHHHHHHHCTTEEEEEEETT--TCHHHHHHTTCCBSSEE
T ss_pred HHHHHHHHHhc--CCCEEEEEEECCCCCCccCCC------cchhhhhhccCCeEEEEEecc--cCHHHHHHcCCCeecEE
Confidence 44677777654 579999999999999999995 44444444 35889888776 45679999999999999
Q ss_pred EEEeCCCCeeEEEecCCCChHHHHHHH
Q 021955 200 LVIDPITGQKICSWCGMINPQPLGEML 226 (305)
Q Consensus 200 ~IIdprTGe~~~~~~G~~~~~~~l~~L 226 (305)
.++. .|+.+..+.|. +++++.+.|
T Consensus 78 ~~~~--~G~~v~~~~G~-~~~~l~~~i 101 (105)
T 3zzx_A 78 LFMK--NGQKLDSLSGA-NYDKLLELV 101 (105)
T ss_dssp EEEE--TTEEEEEEESC-CHHHHHHHH
T ss_pred EEEE--CCEEEEEEeCc-CHHHHHHHH
Confidence 9884 69999999995 666544433
No 21
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.97 E-value=4e-09 Score=83.56 Aligned_cols=99 Identities=25% Similarity=0.306 Sum_probs=78.1
Q ss_pred cccccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCC
Q 021955 118 HVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDS 195 (305)
Q Consensus 118 ~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~ 195 (305)
...-..+|++++..+ .+|++||+++++||.+|+.+. +.+.++.++ ++.|..++.+. ...+++.|++..
T Consensus 15 ~~~t~~~f~~~l~~~--~~k~vlv~F~a~wC~~C~~~~------p~l~~l~~~~~~v~~~~vd~d~--~~~l~~~~~v~~ 84 (116)
T 3qfa_C 15 QIESKTAFQEALDAA--GDKLVVVDFSATWCGPSKMIK------PFFHSLSEKYSNVIFLEVDVDD--CQDVASECEVKS 84 (116)
T ss_dssp CCCCHHHHHHHHHHH--TTSCEEEEEECTTCHHHHHHH------HHHHHHHTTCTTSEEEEEETTT--THHHHHHTTCCS
T ss_pred CCCCHHHHHHHHHhc--CCCEEEEEEECCCCHHHHHHH------HHHHHHHHHCCCCEEEEEECCC--CHHHHHHcCCcc
Confidence 334556677777544 799999999999999999995 455555553 37888887764 567899999999
Q ss_pred CceEEEEeCCCCeeEEEecCCCChHHHHHHHHHH
Q 021955 196 IPAVLVIDPITGQKICSWCGMINPQPLGEMLLPF 229 (305)
Q Consensus 196 ~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~f 229 (305)
+|+++|+ +.|+.+..+.|. +++++.+.|.+.
T Consensus 85 ~Pt~~~~--~~G~~~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 85 MPTFQFF--KKGQKVGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp SSEEEEE--SSSSEEEEEESC-CHHHHHHHHHHH
T ss_pred ccEEEEE--eCCeEEEEEcCC-CHHHHHHHHHHh
Confidence 9999998 469999999998 888888777664
No 22
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.96 E-value=5.1e-09 Score=82.69 Aligned_cols=106 Identities=11% Similarity=0.132 Sum_probs=83.8
Q ss_pred CCccccccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcC
Q 021955 115 PPFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYN 192 (305)
Q Consensus 115 PP~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~ 192 (305)
+...+.-..+|++++..|+..+|++||+++++||..|+.+.. .+.++.++ ++.|..++.+. ...+++.|+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~------~l~~~~~~~~~~~~~~vd~~~--~~~~~~~~~ 84 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAP------VFADLAKKFPNAVFLKVDVDE--LKPIAEQFS 84 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHH------HHHHHHHHCTTSEEEEEETTT--CHHHHHHTT
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHH------HHHHHHHHCCCcEEEEEECCC--CHHHHHHcC
Confidence 334445567799999999999999999999999999999954 33444332 37888887764 457889999
Q ss_pred CCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 193 MDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 193 ~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
+..+|+++|+. .|+.+..+.|.. ++++.+.|.+.+.
T Consensus 85 v~~~Pt~~~~~--~G~~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 85 VEAMPTFLFMK--EGDVKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp CCSSSEEEEEE--TTEEEEEEESSC-HHHHHHHHHHHHS
T ss_pred CCcccEEEEEe--CCEEEEEEeCcC-HHHHHHHHHHHhc
Confidence 99999988773 699998899988 8888887777664
No 23
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.95 E-value=4.2e-09 Score=85.33 Aligned_cols=103 Identities=14% Similarity=0.159 Sum_probs=84.5
Q ss_pred cccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCCCc
Q 021955 120 MFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIP 197 (305)
Q Consensus 120 ~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~~P 197 (305)
....+|++++..++.++|++||+++++||..|+.+.. .+.++.++ ++.|+.++.+. ...+++.|++..+|
T Consensus 30 ~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~------~l~~l~~~~~~v~~~~v~~~~--~~~~~~~~~v~~~P 101 (139)
T 3d22_A 30 TTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAP------YYIELSENYPSLMFLVIDVDE--LSDFSASWEIKATP 101 (139)
T ss_dssp CSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHH------HHHHHHHHCTTSEEEEEETTT--SHHHHHHTTCCEES
T ss_pred CCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHH------HHHHHHHHCCCCEEEEEeCcc--cHHHHHHcCCCccc
Confidence 3456899999999999999999999999999999964 34444443 58888887764 45789999999999
Q ss_pred eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021955 198 AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (305)
Q Consensus 198 ~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~ 233 (305)
+++|+ +.|+.+..+.|. +++++.+.|...+..-
T Consensus 102 t~~~~--~~G~~~~~~~G~-~~~~l~~~l~~~~~~~ 134 (139)
T 3d22_A 102 TFFFL--RDGQQVDKLVGA-NKPELHKKITAILDSL 134 (139)
T ss_dssp EEEEE--ETTEEEEEEESC-CHHHHHHHHHHHHHTS
T ss_pred EEEEE--cCCeEEEEEeCC-CHHHHHHHHHHHhccC
Confidence 99888 379999999998 8888888888887653
No 24
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.94 E-value=4e-09 Score=81.69 Aligned_cols=100 Identities=12% Similarity=0.199 Sum_probs=81.9
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCCCce
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~~P~ 198 (305)
...+|++++..|+..+|+++|+++++||..|+.+.. .+.++.++ ++.|..++.+. ...+++.|++..+|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~------~l~~~~~~~~~v~~~~v~~~~--~~~~~~~~~v~~~Pt 82 (113)
T 1ti3_A 11 TVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAP------IFAELAKKFPNVTFLKVDVDE--LKAVAEEWNVEAMPT 82 (113)
T ss_dssp SHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHH------HHHHHHHHCSSEEEEEEETTT--CHHHHHHHHCSSTTE
T ss_pred cHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHH------HHHHHHHhCCCcEEEEEEccc--cHHHHHhCCCCcccE
Confidence 456789999999999999999999999999999954 44555544 68888887764 456889999999999
Q ss_pred EEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 199 VLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 199 i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
++++. .|+.+..+.| .+++++.+.|.+++.
T Consensus 83 ~~~~~--~G~~~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 83 FIFLK--DGKLVDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp EEEEE--TTEEEEEEEC-CCTTHHHHHHHHHHH
T ss_pred EEEEe--CCEEEEEEec-CCHHHHHHHHHHhhc
Confidence 99884 6999988899 588888888877763
No 25
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.93 E-value=6.6e-09 Score=82.94 Aligned_cols=104 Identities=12% Similarity=0.129 Sum_probs=82.3
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEE
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~I 201 (305)
..+|++.+ .+.+|++||+++++||..|+.+...+ +.+.+-++.++.|..++.+. ...++..|++..+|++.+
T Consensus 24 ~~~f~~~~---~~~~~~~lv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~ 95 (130)
T 2dml_A 24 PSNFNREV---IQSDGLWLVEFYAPWCGHCQRLTPEW---KKAATALKDVVKVGAVNADK--HQSLGGQYGVQGFPTIKI 95 (130)
T ss_dssp TTTHHHHT---TTCSSCEEEEEECTTCSTTGGGHHHH---HHHHHHTTTTSEEEEEETTT--CHHHHHHHTCCSSSEEEE
T ss_pred HHHHHHHH---hcCCCeEEEEEECCCCHHHHhhCHHH---HHHHHHhcCceEEEEEeCCC--CHHHHHHcCCCccCEEEE
Confidence 44566544 35689999999999999999997654 45555566668888887764 456889999999999999
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021955 202 IDPITGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (305)
Q Consensus 202 IdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~~ 234 (305)
+++ .|+.+..+.|..+.+++++.|.+.+..++
T Consensus 96 ~~~-~~~~~~~~~G~~~~~~l~~~l~~~l~~~~ 127 (130)
T 2dml_A 96 FGA-NKNKPEDYQGGRTGEAIVDAALSALRSGP 127 (130)
T ss_dssp ESS-CTTSCEECCSCCSHHHHHHHHHHHHHHSS
T ss_pred EeC-CCCeEEEeecCCCHHHHHHHHHHHHhcCC
Confidence 996 45557778999999999999998887654
No 26
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.91 E-value=7.1e-09 Score=79.45 Aligned_cols=99 Identities=18% Similarity=0.265 Sum_probs=78.4
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEE
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~ 200 (305)
-..+|++++. ++|++||+++++||..|+.+...+ ..+.+-...++.|..++.+ +...+++.|++..+|+++
T Consensus 10 ~~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~i~~~Pt~~ 80 (109)
T 3tco_A 10 TEENFDEVIR----NNKLVLVDCWAEWCAPCHLYEPIY---KKVAEKYKGKAVFGRLNVD--ENQKIADKYSVLNIPTTL 80 (109)
T ss_dssp CTTTHHHHHH----HSSEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTSEEEEEETT--TCHHHHHHTTCCSSSEEE
T ss_pred cHHHHHHHHh----cCCeEEEEEECCCCHHHHhhhHHH---HHHHHHhCCCceEEEEccc--cCHHHHHhcCcccCCEEE
Confidence 3456777663 489999999999999999996433 3344444557888888766 455789999999999999
Q ss_pred EEeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021955 201 VIDPITGQKICSWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 201 IIdprTGe~~~~~~G~~~~~~~l~~L~~fl 230 (305)
++ +.|+.+..+.|..+.+++.+.|.+.+
T Consensus 81 ~~--~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 81 IF--VNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EE--ETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred EE--cCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 99 36999999999999999888887765
No 27
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.89 E-value=1.4e-08 Score=78.31 Aligned_cols=91 Identities=12% Similarity=0.178 Sum_probs=76.1
Q ss_pred HcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEe
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSW 213 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~ 213 (305)
..+|.+||+++++||..|+.+...+ +.+.+....++.|..++.+. ...++..|++..+|+++++. .|+.+..+
T Consensus 20 ~~~~~vlv~f~a~~C~~C~~~~~~~---~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~--~g~~~~~~ 92 (111)
T 3gnj_A 20 DEGKACLVMFSRKNCHVCQKVTPVL---EELRLNYEESFGFYYVDVEE--EKTLFQRFSLKGVPQILYFK--DGEYKGKM 92 (111)
T ss_dssp TSCCCEEEEEECSSCHHHHHHHHHH---HHHHHHTTTTSEEEEEETTT--CHHHHHHTTCCSSCEEEEEE--TTEEEEEE
T ss_pred hcCCEEEEEEeCCCChhHHHHHHHH---HHHHHHcCCceEEEEEECCc--ChhHHHhcCCCcCCEEEEEE--CCEEEEEE
Confidence 6789999999999999999996544 45555555678899887765 45789999999999999994 69999899
Q ss_pred cCCCChHHHHHHHHHHHh
Q 021955 214 CGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 214 ~G~~~~~~~l~~L~~fl~ 231 (305)
.|..+.+++.+.|.+.+.
T Consensus 93 ~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 93 AGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp ESSCCHHHHHHHHHHHHH
T ss_pred eccCCHHHHHHHHHHHhc
Confidence 999999999988888765
No 28
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.88 E-value=2.1e-09 Score=87.53 Aligned_cols=97 Identities=5% Similarity=-0.082 Sum_probs=81.4
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEec
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWC 214 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~ 214 (305)
..+++||+|..+||.+|++|++.|.....+..-.+ .+.+..++++......++..|++...|++++++ .|+.+.++.
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~-~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~--~G~ev~Ri~ 93 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGR-AAPVQRLQMRDPLPPGLELARPVTFTPTFVLMA--GDVESGRLE 93 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHH-HSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEE--TTEEEEEEE
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcc-cceEEEEECCCCCchhHHHHCCCCCCCEEEEEE--CCEEEeeec
Confidence 34799999999999999999999988877655444 466677777776666778899999999999999 699999999
Q ss_pred CCCChHHHHHHHHHHHhhCC
Q 021955 215 GMINPQPLGEMLLPFMDRSP 234 (305)
Q Consensus 215 G~~~~~~~l~~L~~fl~~~~ 234 (305)
|++.++.|+..|...+.+.+
T Consensus 94 G~~~~~~f~~~L~~~l~~~~ 113 (116)
T 3dml_A 94 GYPGEDFFWPMLARLIGQAE 113 (116)
T ss_dssp CCCCHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHhhcC
Confidence 99999999999999887654
No 29
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.87 E-value=1.4e-08 Score=79.53 Aligned_cols=99 Identities=18% Similarity=0.192 Sum_probs=78.8
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEE
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~ 200 (305)
...+|++++ .+|.+||+++++||..|+.+...+ +.+.+-++.++.|+.++.+.. ..+++.|++..+|++.
T Consensus 7 ~~~~~~~~~-----~~~~~lv~f~a~wC~~C~~~~~~l---~~~~~~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~ 76 (112)
T 2voc_A 7 TDQSFSAET-----SEGVVLADFWAPWCGPSKMIAPVL---EELDQEMGDKLKIVKIDVDEN--QETAGKYGVMSIPTLL 76 (112)
T ss_dssp CTTTHHHHH-----SSSEEEEEEECTTBGGGGGHHHHH---HHHHHHHTTTCEEEEEETTTC--CSHHHHTTCCSBSEEE
T ss_pred cHHHHHHHh-----CCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhCCCcEEEEEECCCC--HHHHHHcCCCcccEEE
Confidence 345677777 789999999999999999997654 455555666799998887653 4688999999999999
Q ss_pred EEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 201 VIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 201 IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
|+ . .|+.+..+.|..+.++|.+.|...+.
T Consensus 77 ~~-~-~G~~~~~~~G~~~~~~l~~~l~~~~~ 105 (112)
T 2voc_A 77 VL-K-DGEVVETSVGFKPKEALQELVNKHLL 105 (112)
T ss_dssp EE-E-TTEEEEEEESCCCHHHHHHHHHTTSC
T ss_pred EE-e-CCEEEEEEeCCCCHHHHHHHHHHHHH
Confidence 99 3 69999999999998876665554443
No 30
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.86 E-value=1.4e-08 Score=78.74 Aligned_cols=101 Identities=16% Similarity=0.138 Sum_probs=80.5
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEE
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~I 201 (305)
..+|++.+ ...+|.+||+++++||..|+.+...+ +.+.+....++.|+.++.+. ...+++.|++..+|++.+
T Consensus 14 ~~~~~~~~---~~~~~~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~v~~~Pt~~~ 85 (115)
T 1thx_A 14 DAEFESEV---LKAEQPVLVYFWASWCGPCQLMSPLI---NLAANTYSDRLKVVKLEIDP--NPTTVKKYKVEGVPALRL 85 (115)
T ss_dssp GGGHHHHT---TTCSSCEEEEEECTTCTTHHHHHHHH---HHHHHHTTTTCEEEEEESTT--CHHHHHHTTCCSSSEEEE
T ss_pred ccchhhHh---hcCCceEEEEEECCCCHHHHHhHHHH---HHHHHHhCCcEEEEEEEcCC--CHHHHHHcCCCceeEEEE
Confidence 34555544 46789999999999999999997654 45555555678888887765 346889999999999999
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 202 IDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 202 IdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
+ +.|+.+..+.|..+.+++.+.|.+.+..
T Consensus 86 ~--~~G~~~~~~~g~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 86 V--KGEQILDSTEGVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp E--ETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred E--cCCEEEEEecCCCCHHHHHHHHHHHhcC
Confidence 9 3799998899999999988888887753
No 31
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.86 E-value=1.8e-08 Score=82.66 Aligned_cols=103 Identities=13% Similarity=0.152 Sum_probs=83.3
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEE
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~ 200 (305)
-..+|++++ ..+|++||+++++||..|+.+...+ ..+.+-.+.++.|..++.+. ...+++.|++..+|+++
T Consensus 44 ~~~~~~~~~----~~~k~vlv~F~a~wC~~C~~~~p~l---~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~ 114 (148)
T 3p2a_A 44 TAETLDKLL----QDDLPMVIDFWAPWCGPCRSFAPIF---AETAAERAGKVRFVKVNTEA--EPALSTRFRIRSIPTIM 114 (148)
T ss_dssp CTTTHHHHT----TCSSCEEEEEECSSCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEE
T ss_pred CHHHHHHHH----hcCCcEEEEEECCCCHHHHHHHHHH---HHHHHHcCCceEEEEEECcC--CHHHHHHCCCCccCEEE
Confidence 345677666 7899999999999999999996443 34444455678898887664 45789999999999999
Q ss_pred EEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021955 201 VIDPITGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (305)
Q Consensus 201 IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~~ 234 (305)
|+. .|+.+..+.|..+.++|.+.|.+.+...+
T Consensus 115 ~~~--~G~~~~~~~G~~~~~~l~~~l~~~l~~~~ 146 (148)
T 3p2a_A 115 LYR--NGKMIDMLNGAVPKAPFDNWLDEQLSRDP 146 (148)
T ss_dssp EEE--TTEEEEEESSCCCHHHHHHHHHHHHHSCC
T ss_pred EEE--CCeEEEEEeCCCCHHHHHHHHHHHhcccC
Confidence 995 69999999999999999999999887643
No 32
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.86 E-value=1.4e-08 Score=81.09 Aligned_cols=100 Identities=13% Similarity=0.133 Sum_probs=80.5
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh----ccEEEEEecCCChhHHHHHHhcCCCCCce
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS----VNFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~----~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~ 198 (305)
.+|++++ .+.+|.+||+++++||..|+.+...+ ..+.+-++ .++.|..++.+. ...+++.|++..+|+
T Consensus 15 ~~~~~~~---~~~~~~~lv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~Pt 86 (133)
T 1x5d_A 15 DSFDKNV---LDSEDVWMVEFYAPWCGHCKNLEPEW---AAAASEVKEQTKGKVKLAAVDATV--NQVLASRYGIRGFPT 86 (133)
T ss_dssp THHHHHT---TTSSSEEEEEEECTTCHHHHTHHHHH---HHHHHHHHHHTTTSEEEEEEETTT--CCHHHHHHTCCSSSE
T ss_pred hhHHHHH---hcCCCeEEEEEECCCCHHHHhhcHHH---HHHHHHHHhhcCCcEEEEEEECCC--CHHHHHhCCCCeeCe
Confidence 3454433 35689999999999999999997654 34444454 678998887764 457889999999999
Q ss_pred EEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 199 VLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 199 i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
+.|+++ |+.+..+.|..+.+++.+.|.+.+..
T Consensus 87 ~~~~~~--g~~~~~~~G~~~~~~l~~~l~~~~~~ 118 (133)
T 1x5d_A 87 IKIFQK--GESPVDYDGGRTRSDIVSRALDLFSD 118 (133)
T ss_dssp EEEEET--TEEEEEECSCCSHHHHHHHHHHHHHH
T ss_pred EEEEeC--CCceEEecCCCCHHHHHHHHHHHhhc
Confidence 999996 88888899999999999999998875
No 33
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.86 E-value=1.4e-08 Score=78.92 Aligned_cols=97 Identities=15% Similarity=0.282 Sum_probs=73.2
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc----cEEEEEecCCChhHHHHHHhcCCCCCce
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV----NFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~----nFIfwq~~~ds~eg~~~~~~Y~~~~~P~ 198 (305)
.+|++++.. +..+|+++|+++++||.+|+.+.. .+.++.++ ++.|..++.+. ...++..|++..+|+
T Consensus 9 ~~~~~~~~~-~~~~~~~~v~f~a~wC~~C~~~~~------~~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt 79 (112)
T 3d6i_A 9 EQFTYLTTT-AAGDKLIVLYFHTSWAEPCKALKQ------VFEAISNEPSNSNVSFLSIDADE--NSEISELFEISAVPY 79 (112)
T ss_dssp HHHHHHHTT-TTTTCCEEEEEECCC--CHHHHHH------HHHHHHHCGGGTTSEEEEEETTT--CHHHHHHTTCCSSSE
T ss_pred HHHHHHHhc-ccCCCEEEEEEECCCCHHHHHHHH------HHHHHHHhcCCCCEEEEEEeccc--CHHHHHHcCCCcccE
Confidence 456766654 466999999999999999999954 44555443 68899887765 346889999999999
Q ss_pred EEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 199 VLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 199 i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
++++. .|+.+..+.|. .++++.+.|.+.+.
T Consensus 80 ~~~~~--~G~~~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 80 FIIIH--KGTILKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp EEEEE--TTEEEEEECSC-CHHHHHHHHHHHHH
T ss_pred EEEEE--CCEEEEEecCC-CHHHHHHHHHHHHh
Confidence 98884 69999999997 45567777766654
No 34
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.85 E-value=1.3e-08 Score=77.71 Aligned_cols=96 Identities=19% Similarity=0.164 Sum_probs=77.7
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEE
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~ 200 (305)
-..+|++++ .+|++||+++++||..|+.+...+ ..+.+-++.++.|..++.+. ...+++.|++..+|+++
T Consensus 9 ~~~~~~~~~-----~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~ 78 (106)
T 3die_A 9 TDADFDSKV-----ESGVQLVDFWATACGPCKMIAPVL---EELAADYEGKADILKLDVDE--NPSTAAKYEVMSIPTLI 78 (106)
T ss_dssp CTTTHHHHS-----CSSEEEEEEECSBCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSBSEEE
T ss_pred CHHHHHHHh-----cCCcEEEEEECCCCHHHHHHhHHH---HHHHHHhcCCcEEEEEECCc--CHHHHHhCCCcccCEEE
Confidence 456677777 799999999999999999996554 55555556668888887654 45688999999999999
Q ss_pred EEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021955 201 VIDPITGQKICSWCGMINPQPLGEMLLP 228 (305)
Q Consensus 201 IIdprTGe~~~~~~G~~~~~~~l~~L~~ 228 (305)
+++ .|+.+..+.|..+.+++.+.|.+
T Consensus 79 ~~~--~G~~~~~~~g~~~~~~l~~~l~~ 104 (106)
T 3die_A 79 VFK--DGQPVDKVVGFQPKENLAEVLDK 104 (106)
T ss_dssp EEE--TTEEEEEEESCCCHHHHHHHHHT
T ss_pred EEe--CCeEEEEEeCCCCHHHHHHHHHH
Confidence 996 69999999999998887776654
No 35
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.84 E-value=1.9e-08 Score=79.64 Aligned_cols=91 Identities=13% Similarity=0.196 Sum_probs=73.0
Q ss_pred HHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEE
Q 021955 133 LAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICS 212 (305)
Q Consensus 133 k~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~ 212 (305)
.+.+|++||+++++||..|+.+...+ ..+.+-...++.|..++.+. ...+++.|++..+|+++|+ +.|+.+..
T Consensus 28 ~~~~k~vlv~f~a~~C~~C~~~~~~l---~~~~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~--~~G~~~~~ 100 (119)
T 1w4v_A 28 VNSETPVVVDFHAQWCGPCKILGPRL---EKMVAKQHGKVVMAKVDIDD--HTDLAIEYEVSAVPTVLAM--KNGDVVDK 100 (119)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTSSEEEEEETTT--THHHHHHTTCCSSSEEEEE--ETTEEEEE
T ss_pred HcCCCcEEEEEECCCCHHHHHHHHHH---HHHHHHhcCCeEEEEEeCCC--CHHHHHHcCCCcccEEEEE--eCCcEEEE
Confidence 45789999999999999999996543 23333444578898887765 3478899999999999999 37999988
Q ss_pred ecCCCChHHHHHHHHHHH
Q 021955 213 WCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 213 ~~G~~~~~~~l~~L~~fl 230 (305)
+.|..+++++.+.|.+.+
T Consensus 101 ~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 101 FVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EESCCCHHHHHHHHHHHH
T ss_pred EcCCCCHHHHHHHHHHHh
Confidence 999989988888777665
No 36
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.84 E-value=1.7e-08 Score=77.46 Aligned_cols=94 Identities=15% Similarity=0.177 Sum_probs=74.7
Q ss_pred HHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCee
Q 021955 130 DAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQK 209 (305)
Q Consensus 130 ~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~ 209 (305)
....+.+|+++|+++++||..|+.+...+ ..+.+-++.++.|..++.+. ...+++.|++..+|++.|+ +.|+.
T Consensus 13 ~~~~~~~~~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~--~~G~~ 85 (107)
T 1dby_A 13 NVVLESSVPVLVDFWAPWCGPCRIIAPVV---DEIAGEYKDKLKCVKLNTDE--SPNVASEYGIRSIPTIMVF--KGGKK 85 (107)
T ss_dssp HHTTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTT--CHHHHHHHTCCSSCEEEEE--SSSSE
T ss_pred HHHhcCCCcEEEEEECCCCHhHHHHHHHH---HHHHHHhCCceEEEEEECCC--CHHHHHHCCCCcCCEEEEE--eCCEE
Confidence 33456789999999999999999996544 44445555678888887664 4568899999999998887 37999
Q ss_pred EEEecCCCChHHHHHHHHHHH
Q 021955 210 ICSWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 210 ~~~~~G~~~~~~~l~~L~~fl 230 (305)
+..+.|..+.+++.+.|.+.+
T Consensus 86 ~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 86 CETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp EEEEESCCCHHHHHHHHHHHC
T ss_pred EEEEeCCCCHHHHHHHHHHHh
Confidence 988999999988888877665
No 37
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.83 E-value=1.8e-08 Score=76.99 Aligned_cols=97 Identities=16% Similarity=0.169 Sum_probs=76.6
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEE
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVI 202 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~II 202 (305)
.+|++++ +.+|++||+++++||..|+.+...+ ..+.+-+..++.|+.++.+. ...+++.|++..+|++.++
T Consensus 9 ~~~~~~~----~~~~~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~ 79 (109)
T 2yzu_A 9 QNFDETL----GQHPLVLVDFWAEWCAPCRMIAPIL---EEIAKEYEGKLLVAKLDVDE--NPKTAMRYRVMSIPTVILF 79 (109)
T ss_dssp TTHHHHH----HHCSEEEEEEECTTCHHHHHHHHHH---HHHHHHTBTTBEEEEEETTT--CHHHHHHTTCCSSSEEEEE
T ss_pred hHHHHHh----cCCCeEEEEEECCCCHHHHHhhHHH---HHHHHHhhCceEEEEEECCC--CHhHHHhCCCCcCCEEEEE
Confidence 4566443 5689999999999999999997644 44555555679999888765 3468899999999999999
Q ss_pred eCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021955 203 DPITGQKICSWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 203 dprTGe~~~~~~G~~~~~~~l~~L~~fl 230 (305)
..|+.+..+.|..+.+++.+.|...+
T Consensus 80 --~~g~~~~~~~g~~~~~~l~~~l~~~l 105 (109)
T 2yzu_A 80 --KDGQPVEVLVGAQPKRNYQAKIEKHL 105 (109)
T ss_dssp --ETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred --eCCcEeeeEeCCCCHHHHHHHHHHHh
Confidence 36999988999998888777766554
No 38
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.82 E-value=2e-08 Score=76.81 Aligned_cols=97 Identities=15% Similarity=0.179 Sum_probs=76.9
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEE
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~I 201 (305)
..+|++++ .+.+|++||+++++||..|+.+...+ +.+.+-+..++.|+.++.+. ...+++.|++..+|++.+
T Consensus 9 ~~~~~~~~---~~~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~ 80 (107)
T 2i4a_A 9 DSSFDQDV---LKASGLVLVDFWAEWCGPCKMIGPAL---GEIGKEFAGKVTVAKVNIDD--NPETPNAYQVRSIPTLML 80 (107)
T ss_dssp TTTHHHHT---TTCSSEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTSEEEEEEETTT--CCHHHHHTTCCSSSEEEE
T ss_pred hhhhhHHH---HhCCCEEEEEEECCCChhHHHHhHHH---HHHHHHhCCcEEEEEEECCC--CHHHHHhcCCCccCEEEE
Confidence 34555544 46789999999999999999997654 45555566689999888765 346889999999999999
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHH
Q 021955 202 IDPITGQKICSWCGMINPQPLGEMLLP 228 (305)
Q Consensus 202 IdprTGe~~~~~~G~~~~~~~l~~L~~ 228 (305)
+ ..|+.+..+.|..+.+++.+.|.+
T Consensus 81 ~--~~G~~~~~~~G~~~~~~l~~~l~~ 105 (107)
T 2i4a_A 81 V--RDGKVIDKKVGALPKSQLKAWVES 105 (107)
T ss_dssp E--ETTEEEEEEESCCCHHHHHHHHHH
T ss_pred E--eCCEEEEEecCCCCHHHHHHHHHh
Confidence 9 379999999999998887766654
No 39
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.82 E-value=2e-08 Score=81.13 Aligned_cols=95 Identities=15% Similarity=0.174 Sum_probs=75.2
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh--ccEEEEEecCCChhHHHHHHhcCCCCCceEE
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~--~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~ 200 (305)
.+|++++ ..+|++||+++++||..|+.+... +.++.+ .++.|+.++.+. ...++..|++..+|+++
T Consensus 28 ~~f~~~~----~~~k~vvv~F~a~wC~~C~~~~p~------l~~l~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~ 95 (125)
T 1r26_A 28 EQFRNIM----SEDILTVAWFTAVWCGPCKTIERP------MEKIAYEFPTVKFAKVDADN--NSEIVSKCRVLQLPTFI 95 (125)
T ss_dssp HHHHHHH----HSSSCEEEEEECTTCHHHHHTHHH------HHHHHHHCTTSEEEEEETTT--CHHHHHHTTCCSSSEEE
T ss_pred HHHHHHH----ccCCEEEEEEECCcCHhHHHHHHH------HHHHHHHCCCCEEEEEECCC--CHHHHHHcCCCcccEEE
Confidence 4466655 689999999999999999999643 444443 368999888764 45688999999999988
Q ss_pred EEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 201 VIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 201 IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
|+ +.|+.+..+.| .+++++.+.|.+.+..
T Consensus 96 i~--~~G~~~~~~~G-~~~~~l~~~l~~~l~~ 124 (125)
T 1r26_A 96 IA--RSGKMLGHVIG-ANPGMLRQKLRDIIKD 124 (125)
T ss_dssp EE--ETTEEEEEEES-SCHHHHHHHHHHHHHC
T ss_pred EE--eCCeEEEEEeC-CCHHHHHHHHHHHhcC
Confidence 77 36999988999 6888888888877753
No 40
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.82 E-value=3.3e-08 Score=74.68 Aligned_cols=98 Identities=14% Similarity=0.184 Sum_probs=76.2
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEE
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~I 201 (305)
..+|++++ ..+|.++|+++++||..|+.+...+ ..+.+-... +.|..++.+. ...+++.|++..+|++.+
T Consensus 6 ~~~~~~~~----~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~-~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~ 75 (104)
T 2e0q_A 6 SKNFDSFL----ASHEIAVVDFWAEWCAPCLILAPII---EELAEDYPQ-VGFGKLNSDE--NPDIAARYGVMSLPTVIF 75 (104)
T ss_dssp TTTHHHHH----HHSSEEEEEEECTTCHHHHHHHHHH---HHHHHHCTT-SEEEEEETTT--CHHHHHHTTCCSSCEEEE
T ss_pred HHHHHHHH----hcCCcEEEEEECCCChhHHHHhHHH---HHHHHHcCC-ceEEEEECCC--CHHHHHhCCccccCEEEE
Confidence 34677776 4689999999999999999996432 223333333 7888887664 356889999999999999
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 202 IDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 202 IdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
+ +.|+.+..+.|..+.+++.+.|...+.
T Consensus 76 ~--~~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 76 F--KDGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp E--ETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred E--ECCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 9 379999899999999988888887764
No 41
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.82 E-value=2.8e-08 Score=76.37 Aligned_cols=98 Identities=17% Similarity=0.186 Sum_probs=77.2
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEE
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVI 202 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~II 202 (305)
.+|++.. .+.+|.+||+++++||..|+.+...+ ..+.+-.+.++.|..++.+. ...+++.|++..+|++.++
T Consensus 10 ~~f~~~~---~~~~~~~~v~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~ 81 (108)
T 2trx_A 10 DSFDTDV---LKADGAILVDFWAEWCGPCKMIAPIL---DEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLF 81 (108)
T ss_dssp TTHHHHT---TTCSSEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTEEEEEEETTT--CTTHHHHTTCCSSSEEEEE
T ss_pred hhHHHHH---HhcCCeEEEEEECCCCHhHHHHHHHH---HHHHHHhCCCcEEEEEECCC--CHHHHHHcCCcccCEEEEE
Confidence 4455443 46789999999999999999996543 34455555678999887765 3468899999999999999
Q ss_pred eCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021955 203 DPITGQKICSWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 203 dprTGe~~~~~~G~~~~~~~l~~L~~fl 230 (305)
+.|+.+..+.|..+++++.+.|.+.+
T Consensus 82 --~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 82 --KNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp --ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred --eCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 37999999999999988888777654
No 42
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.82 E-value=1.2e-08 Score=78.19 Aligned_cols=91 Identities=16% Similarity=0.135 Sum_probs=72.1
Q ss_pred HHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeE
Q 021955 131 AALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKI 210 (305)
Q Consensus 131 ~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~ 210 (305)
.+.+.+|.+||+++++||..|+.+...+ +.+.+-...++.|..++.+. ...+++.|++..+|++.++ + .|+.+
T Consensus 12 ~~~~~~~~~~v~f~~~~C~~C~~~~~~l---~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~-~-~G~~~ 84 (105)
T 1nsw_A 12 QAIQGDGPVLVDFWAAWCGPCRMMAPVL---EEFAEAHADKVTVAKLNVDE--NPETTSQFGIMSIPTLILF-K-GGRPV 84 (105)
T ss_dssp HHHSSSSCEEEEEECTTCHHHHHHHHHH---HHHHHHSTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEE-E-TTEEE
T ss_pred HHHhCCCcEEEEEECCCCHHHHHHHHHH---HHHHHHhcCCcEEEEEECcC--CHHHHHHcCCccccEEEEE-e-CCeEE
Confidence 3446789999999999999999996554 44555555568888887764 4578899999999999999 3 69988
Q ss_pred EEecCCCChHHHHHHHHH
Q 021955 211 CSWCGMINPQPLGEMLLP 228 (305)
Q Consensus 211 ~~~~G~~~~~~~l~~L~~ 228 (305)
..+.|..+++++.+.|.+
T Consensus 85 ~~~~G~~~~~~l~~~l~~ 102 (105)
T 1nsw_A 85 KQLIGYQPKEQLEAQLAD 102 (105)
T ss_dssp EEEESCCCHHHHHHHTTT
T ss_pred EEEecCCCHHHHHHHHHH
Confidence 889999988876665544
No 43
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.80 E-value=2.1e-08 Score=81.92 Aligned_cols=101 Identities=13% Similarity=0.048 Sum_probs=82.8
Q ss_pred HHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeC
Q 021955 125 FEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDP 204 (305)
Q Consensus 125 f~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdp 204 (305)
-++........+|++||+++++||..|+.+...+ +.+.+-+..++.|..++.+. ...+++.|++..+|+++|+.
T Consensus 13 ~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l---~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~- 86 (140)
T 3hz4_A 13 DMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYF---EEYAKEYGSSAVFGRINIAT--NPWTAEKYGVQGTPTFKFFC- 86 (140)
T ss_dssp HHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTSEEEEEETTT--CHHHHHHHTCCEESEEEEEE-
T ss_pred hHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHH---HHHHHHhCCceEEEEEECCc--CHhHHHHCCCCcCCEEEEEe-
Confidence 3344445566799999999999999999997654 56666666678898887764 45789999999999999984
Q ss_pred CCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 205 ITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 205 rTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
.|+.+..+.|..++++|.+.|.+.+..
T Consensus 87 -~G~~~~~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 87 -HGRPVWEQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp -TTEEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred -CCcEEEEEcCCCCHHHHHHHHHHHhcc
Confidence 699999999999999999999998865
No 44
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.80 E-value=2.8e-08 Score=77.67 Aligned_cols=88 Identities=20% Similarity=0.314 Sum_probs=68.5
Q ss_pred HHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCC
Q 021955 130 DAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITG 207 (305)
Q Consensus 130 ~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTG 207 (305)
..+.+++|++||+++++||.+|+.+.. .+.++.++ ++.|..++.+. ...+++.|++..+|++++++ .|
T Consensus 18 ~~~~~~~k~vlv~f~a~wC~~C~~~~p------~l~~l~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~--~G 87 (109)
T 3f3q_A 18 DSAIAQDKLVVVDFYATWCGPCKMIAP------MIEKFSEQYPQADFYKLDVDE--LGDVAQKNEVSAMPTLLLFK--NG 87 (109)
T ss_dssp HHHTTSSSCEEEEEECTTCHHHHHHHH------HHHHHHHHCTTSEEEEEETTT--CHHHHHHTTCCSSSEEEEEE--TT
T ss_pred HHHHhcCCEEEEEEECCcCHhHHHHHH------HHHHHHHHCCCCEEEEEECCC--CHHHHHHcCCCccCEEEEEE--CC
Confidence 345567999999999999999999964 44454443 47777776654 45689999999999999998 69
Q ss_pred eeEEEecCCCChHHHHHHHHH
Q 021955 208 QKICSWCGMINPQPLGEMLLP 228 (305)
Q Consensus 208 e~~~~~~G~~~~~~~l~~L~~ 228 (305)
+.+..+.|. +++++.+.|.+
T Consensus 88 ~~~~~~~G~-~~~~l~~~i~~ 107 (109)
T 3f3q_A 88 KEVAKVVGA-NPAAIKQAIAA 107 (109)
T ss_dssp EEEEEEESS-CHHHHHHHHHH
T ss_pred EEEEEEeCC-CHHHHHHHHHh
Confidence 999999998 67766665554
No 45
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.80 E-value=7.6e-09 Score=87.54 Aligned_cols=117 Identities=18% Similarity=0.189 Sum_probs=85.3
Q ss_pred HhhhhCCCccccccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHh--hccEEEEEecCCChhHHH
Q 021955 109 LASLYRPPFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII--SVNFIFWQEYDDTSEGWK 186 (305)
Q Consensus 109 la~lFrPP~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i--~~nFIfwq~~~ds~eg~~ 186 (305)
+...|.+.+.. .+|++++..+..++|++||+++.+||.+|+.+...+ .. +.++. +-+||..-++.+...
T Consensus 22 ~~~~~~~~i~w---~~~~~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l-~~--~~~~~~~~~~~~~v~~d~~~~~--- 92 (164)
T 1sen_A 22 LGKGFGDHIHW---RTLEDGKKEAAASGLPLMVIIHKSWCGACKALKPKF-AE--STEISELSHNFVMVNLEDEEEP--- 92 (164)
T ss_dssp CCTTSCTTSCB---CCHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHH-HT--CHHHHHHHTTSEEEEEEGGGSC---
T ss_pred ccccccccccc---cCHHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHH-HH--HHHHhhcCCeEEEEEecCCchH---
Confidence 33445555543 689999999999999999999999999999998743 33 22222 345666555433221
Q ss_pred HHHhcCC--CCCceEEEEeCCCCeeEEEecCC----------CChHHHHHHHHHHHhhCCC
Q 021955 187 VCSFYNM--DSIPAVLVIDPITGQKICSWCGM----------INPQPLGEMLLPFMDRSPR 235 (305)
Q Consensus 187 ~~~~Y~~--~~~P~i~IIdprTGe~~~~~~G~----------~~~~~~l~~L~~fl~~~~~ 235 (305)
++..|.+ ..+|+++|+|+ .|+.+..+.|. .++++|++.|...++....
T Consensus 93 ~~~~~~~~~~~~Pt~~~~d~-~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~ 152 (164)
T 1sen_A 93 KDEDFSPDGGYIPRILFLDP-SGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQERLTG 152 (164)
T ss_dssp SCGGGCTTCSCSSEEEEECT-TSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHHHHGG
T ss_pred HHHHhcccCCcCCeEEEECC-CCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHHHhccH
Confidence 5566777 66999999996 68888777774 7899999999999876543
No 46
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.80 E-value=1.3e-08 Score=78.65 Aligned_cols=87 Identities=13% Similarity=0.117 Sum_probs=64.6
Q ss_pred HcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEE
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKIC 211 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~ 211 (305)
+++|++||+++++||.+|+.+. +.+.++.++ ++.|..++.+.. ..+++.|++..+|+++++. .|+.+.
T Consensus 16 ~~~~~vlv~f~a~wC~~C~~~~------p~~~~~~~~~~~~~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~--~G~~~~ 85 (105)
T 4euy_A 16 EEQQLVLLFIKTENCGVCDVML------RKVNYVLENYNYVEKIEILLQDM--QEIAGRYAVFTGPTVLLFY--NGKEIL 85 (105)
T ss_dssp TCSSEEEEEEEESSCHHHHHHH------HHHHHHHHTCTTEEEEEEEECCC-----------CCCCEEEEEE--TTEEEE
T ss_pred hcCCCEEEEEeCCCCcchHHHH------HHHHHHHHHcCCceEEEEECCCC--HHHHHhcCCCCCCEEEEEe--CCeEEE
Confidence 5789999999999999999995 455555554 688888887643 4688999999999999996 699999
Q ss_pred EecCCCChHHHHHHHHHHH
Q 021955 212 SWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 212 ~~~G~~~~~~~l~~L~~fl 230 (305)
.+.|..+.+++.+.|.+++
T Consensus 86 ~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 86 RESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEESSCCHHHHHHHHHTTC
T ss_pred EEeCCcCHHHHHHHHHHhh
Confidence 9999999998888776654
No 47
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.79 E-value=1.7e-08 Score=78.35 Aligned_cols=92 Identities=18% Similarity=0.120 Sum_probs=73.9
Q ss_pred HHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEE
Q 021955 133 LAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICS 212 (305)
Q Consensus 133 k~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~ 212 (305)
.+.+|.++|+++++||..|+.+...+ ..+.+-+..++.|+.++.+. ...+++.|++..+|+++|+. .|+.+..
T Consensus 20 ~~~~~~~vv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~--~G~~~~~ 92 (112)
T 1t00_A 20 LKNDKPVLVDFWAAWCGPCRQIAPSL---EAIAAEYGDKIEIVKLNIDE--NPGTAAKYGVMSIPTLNVYQ--GGEVAKT 92 (112)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEE--TTEEEEE
T ss_pred hhCCCeEEEEEECCCCHhHHhcCHHH---HHHHHHhcCCeEEEEEEcCC--CHHHHHhCCCCcccEEEEEe--CCEEEEE
Confidence 35689999999999999999996543 33444444568898887765 35688999999999988873 6999999
Q ss_pred ecCCCChHHHHHHHHHHHh
Q 021955 213 WCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 213 ~~G~~~~~~~l~~L~~fl~ 231 (305)
+.|..+.+++.+.|.+.+.
T Consensus 93 ~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 93 IVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EESCCCHHHHHHHTHHHHC
T ss_pred EeCCCCHHHHHHHHHHHhh
Confidence 9999999998888877764
No 48
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.79 E-value=2.4e-08 Score=76.18 Aligned_cols=94 Identities=26% Similarity=0.316 Sum_probs=72.9
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCCCceEE
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~ 200 (305)
..|++++..+ .+|.++|+++++||..|+.+.. .+.++.++ ++.|..++.+. ...+++.|++..+|+++
T Consensus 9 ~~~~~~l~~~--~~~~~~v~f~~~~C~~C~~~~~------~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~ 78 (105)
T 3m9j_A 9 TAFQEALDAA--GDKLVVVDFSATWCGPCKMIKP------FFHSLSEKYSNVIFLEVDVDD--CQDVASESEVKSMPTFQ 78 (105)
T ss_dssp HHHHHHHHHT--TTSCEEEEEECTTCHHHHHHHH------HHHHHHHHSTTSEEEEEETTT--CHHHHHHTTCCBSSEEE
T ss_pred HHHHHHHHhc--CCCeEEEEEECCCChhhHHHHH------HHHHHHHHccCeEEEEEEhhh--hHHHHHHcCCCcCcEEE
Confidence 3456665433 6899999999999999999964 34444332 47888877654 46789999999999999
Q ss_pred EEeCCCCeeEEEecCCCChHHHHHHHHHH
Q 021955 201 VIDPITGQKICSWCGMINPQPLGEMLLPF 229 (305)
Q Consensus 201 IIdprTGe~~~~~~G~~~~~~~l~~L~~f 229 (305)
++. .|+.+..+.|. +++++.+.|.+.
T Consensus 79 ~~~--~g~~~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 79 FFK--KGQKVGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp EEE--TTEEEEEEESS-CHHHHHHHHHHH
T ss_pred EEE--CCeEEEEEeCC-CHHHHHHHHHHh
Confidence 995 59999999998 888887777654
No 49
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.79 E-value=2.3e-08 Score=80.99 Aligned_cols=90 Identities=14% Similarity=0.134 Sum_probs=73.4
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEec
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWC 214 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~ 214 (305)
.+|++||+++++||..|+.+...+ ..+.+-+..++.|+.++.+. ...+++.|++..+|+++|+++ .|+.+ .+.
T Consensus 50 ~~k~vlv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~-~g~~~-~~~ 122 (141)
T 3hxs_A 50 GDKPAIVDFYADWCGPCKMVAPIL---EELSKEYAGKIYIYKVNVDK--EPELARDFGIQSIPTIWFVPM-KGEPQ-VNM 122 (141)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHH---HHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEECS-SSCCE-EEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhcCceEEEEEECCC--CHHHHHHcCCCCcCEEEEEeC-CCCEE-EEe
Confidence 589999999999999999996554 55555566678898887765 457899999999999999996 57765 788
Q ss_pred CCCChHHHHHHHHHHHh
Q 021955 215 GMINPQPLGEMLLPFMD 231 (305)
Q Consensus 215 G~~~~~~~l~~L~~fl~ 231 (305)
|..+.+++.+.|...|.
T Consensus 123 G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 123 GALSKEQLKGYIDKVLL 139 (141)
T ss_dssp SCCCHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHc
Confidence 99999988888877654
No 50
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.79 E-value=5.3e-08 Score=74.87 Aligned_cols=93 Identities=13% Similarity=0.203 Sum_probs=75.9
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc------cEEEEEecCCChhHHHHHHhcCCC
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV------NFIFWQEYDDTSEGWKVCSFYNMD 194 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~------nFIfwq~~~ds~eg~~~~~~Y~~~ 194 (305)
-..+|++++. +|.+||+++++||..|+.+ .+.+.++.++ ++.|..++.+. ...+++.|++.
T Consensus 11 ~~~~~~~~~~-----~~~~lv~f~~~~C~~C~~~------~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~ 77 (111)
T 3uvt_A 11 TENNFDDTIA-----EGITFIKFYAPWCGHCKTL------APTWEELSKKEFPGLAGVKIAEVDCTA--ERNICSKYSVR 77 (111)
T ss_dssp CTTTHHHHHH-----SSEEEEEEECSSCHHHHHH------HHHHHHHHTCCCCC-CCEEEEEEETTT--CHHHHHHTTCC
T ss_pred ChhhHHHHhc-----CCcEEEEEECCCChhHHHh------hHHHHHHHHHhhccCCceEEEEEeccc--cHhHHHhcCCC
Confidence 4556787775 8899999999999999999 4667777765 57888887664 45689999999
Q ss_pred CCceEEEEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021955 195 SIPAVLVIDPITGQKICSWCGMINPQPLGEMLLP 228 (305)
Q Consensus 195 ~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~ 228 (305)
.+|+++++. .|+.+..+.|..+.+++.+.|.+
T Consensus 78 ~~Pt~~~~~--~g~~~~~~~g~~~~~~l~~~l~~ 109 (111)
T 3uvt_A 78 GYPTLLLFR--GGKKVSEHSGGRDLDSLHRFVLS 109 (111)
T ss_dssp SSSEEEEEE--TTEEEEEECSCCSHHHHHHHHHH
T ss_pred cccEEEEEe--CCcEEEeccCCcCHHHHHHHHHh
Confidence 999999984 69999999999998887776654
No 51
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.78 E-value=1.6e-08 Score=81.15 Aligned_cols=92 Identities=5% Similarity=0.118 Sum_probs=74.8
Q ss_pred HHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCe
Q 021955 129 KDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQ 208 (305)
Q Consensus 129 ~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe 208 (305)
...+..++|++||+++++||..|+.+...+ +.+.+-.+.++.|..++.+. ...+++.|++..+|+++++. .|+
T Consensus 35 ~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l---~~~~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~--~G~ 107 (128)
T 3ul3_B 35 INGVNMKNTVIVLYFFAKWCQACTMQSTEM---DKLQKYYGKRIYLLKVDLDK--NESLARKFSVKSLPTIILLK--NKT 107 (128)
T ss_dssp SSBTTSCCSEEEEEEECTTCHHHHHHHHHH---HHHHHHHGGGEEEEEEEGGG--CHHHHHHTTCCSSSEEEEEE--TTE
T ss_pred HHHHHccCCEEEEEEECCCCHHHHHHhHHH---HHHHHHhcCCeEEEEEECCC--CHHHHHHcCCCCcCEEEEEE--CCE
Confidence 334466799999999999999999997654 45556666789999887764 45789999999999999994 699
Q ss_pred eEEEecCCCChHHHHHHHH
Q 021955 209 KICSWCGMINPQPLGEMLL 227 (305)
Q Consensus 209 ~~~~~~G~~~~~~~l~~L~ 227 (305)
.+..+.|..+.+++.+.|.
T Consensus 108 ~~~~~~G~~~~~~l~~~l~ 126 (128)
T 3ul3_B 108 MLARKDHFVSSNDLIALIK 126 (128)
T ss_dssp EEEEESSCCCHHHHHHHHT
T ss_pred EEEEecCCCCHHHHHHHHH
Confidence 9999999999888766554
No 52
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.78 E-value=6.7e-08 Score=77.97 Aligned_cols=100 Identities=11% Similarity=0.171 Sum_probs=77.7
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhcc---EEEEEecCCChhHHHHHHhcCCCCCce
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN---FIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~n---FIfwq~~~ds~eg~~~~~~Y~~~~~P~ 198 (305)
..+|++++ +.+|++||+++++||..|+.+...+ ..+.+.++.. ++|..++.+. ...++..|++..+|+
T Consensus 24 ~~~~~~~~----~~~~~vlv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~~Pt 94 (140)
T 2dj1_A 24 DGNFDNFV----ADKDTVLLEFYAPWCGHCKQFAPEY---EKIASTLKDNDPPIAVAKIDATS--ASMLASKFDVSGYPT 94 (140)
T ss_dssp TTTHHHHH----TTCSEEEEEECCTTCHHHHTTHHHH---HHHHHHHHSSSSCCEEEEECTTT--CHHHHHHTTCCSSSE
T ss_pred hHhHHHHH----hcCCeEEEEEECCCCHHHHHhhHHH---HHHHHHHhccCCceEEEEEeCcc--cHHHHHHCCCCccCe
Confidence 44566654 4589999999999999999996544 2344444443 8888887654 467899999999999
Q ss_pred EEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021955 199 VLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (305)
Q Consensus 199 i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~ 233 (305)
++|+. .|+ +..+.|..+.++|.+.|...+...
T Consensus 95 ~~~~~--~G~-~~~~~g~~~~~~l~~~l~~~~~~~ 126 (140)
T 2dj1_A 95 IKILK--KGQ-AVDYDGSRTQEEIVAKVREVSQPD 126 (140)
T ss_dssp EEEEE--TTE-EEECCSCCCHHHHHHHHHHHHSSS
T ss_pred EEEEE--CCc-EEEcCCCCCHHHHHHHHHHhcCCC
Confidence 99994 588 778899999999988888887643
No 53
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.78 E-value=1.8e-08 Score=81.77 Aligned_cols=94 Identities=13% Similarity=0.170 Sum_probs=76.0
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEec
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWC 214 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~ 214 (305)
.+|++||+++++||..|+.+...+ ..+.+-++.++.|..++.+. ...+++.|++..+|++.++|+ .|+.+ .+.
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l---~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~-~G~~~-~~~ 109 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPIL---DELAKEYDGQIVIYKVDTEK--EQELAGAFGIRSIPSILFIPM-EGKPE-MAQ 109 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHH---HHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSCEEEEECS-SSCCE-EEE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHH---HHHHHHhcCCEEEEEEeCCC--CHHHHHHcCCCCCCEEEEECC-CCcEE-EEe
Confidence 579999999999999999997543 34555555678899887765 357889999999999999986 68876 678
Q ss_pred CCCChHHHHHHHHHHHhhCCC
Q 021955 215 GMINPQPLGEMLLPFMDRSPR 235 (305)
Q Consensus 215 G~~~~~~~l~~L~~fl~~~~~ 235 (305)
|..+.+++.+.|.+.+.....
T Consensus 110 G~~~~~~l~~~l~~~~~~~~~ 130 (136)
T 2l5l_A 110 GAMPKASFKKAIDEFLLKKEG 130 (136)
T ss_dssp SCCCHHHHHHHHHHHHTSCTT
T ss_pred CCCCHHHHHHHHHHHhhccCC
Confidence 999999988888888765543
No 54
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.78 E-value=2e-08 Score=76.55 Aligned_cols=97 Identities=16% Similarity=0.239 Sum_probs=76.1
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEE
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVI 202 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~II 202 (305)
.+|+++. .+.+|.++|+++++||..|+.+...+ ..+.+-++.++.|..++.+. ...+++.|++..+|++.++
T Consensus 8 ~~~~~~~---~~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~ 79 (105)
T 1fb6_A 8 SSWKEFV---LESEVPVMVDFWAPWCGPCKLIAPVI---DELAKEYSGKIAVYKLNTDE--APGIATQYNIRSIPTVLFF 79 (105)
T ss_dssp TTHHHHT---TTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEE
T ss_pred hhHHHHH---hcCCCcEEEEEECCCChHHHHHHHHH---HHHHHHhcCceEEEEEcCcc--hHHHHHhCCCCcccEEEEE
Confidence 3455443 34689999999999999999997654 44555566678888887764 4578899999999998887
Q ss_pred eCCCCeeEEEecCCCChHHHHHHHHHH
Q 021955 203 DPITGQKICSWCGMINPQPLGEMLLPF 229 (305)
Q Consensus 203 dprTGe~~~~~~G~~~~~~~l~~L~~f 229 (305)
. .|+.+..+.|..+.+++.+.|.+.
T Consensus 80 ~--~g~~~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 80 K--NGERKESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp E--TTEEEEEEEECCCHHHHHHHHHHH
T ss_pred e--CCeEEEEEecCCCHHHHHHHHHhh
Confidence 4 699998899999998888777664
No 55
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.77 E-value=2.4e-08 Score=80.76 Aligned_cols=98 Identities=17% Similarity=0.191 Sum_probs=77.7
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEE
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVI 202 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~II 202 (305)
.+|++.. .+.+|++||+++++||..|+.+...+ ..+.+.+..++.|+.++.+.. ..+++.|++..+|++.++
T Consensus 30 ~~f~~~~---~~~~k~vlv~F~a~wC~~C~~~~p~l---~~l~~~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~ 101 (128)
T 2o8v_B 30 DSFDTDV---LKADGAILVDFWAEWCGPAKMIAPIL---DEIADEYQGKLTVAKLNIDQN--PGTAPKYGIRGIPTLLLF 101 (128)
T ss_dssp TTHHHHT---TTCSSEEEEEEECSSCHHHHHTHHHH---HHHHHHTTTTEEEEEEETTTC--CTTSGGGTCCSSSEEEEE
T ss_pred hhHHHHH---HhcCCEEEEEEECCCCHHHHHHhHHH---HHHHHHhcCCeEEEEEECCCC--HHHHHHcCCCccCEEEEE
Confidence 4455443 46789999999999999999996544 345555556799998887653 468889999999999999
Q ss_pred eCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021955 203 DPITGQKICSWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 203 dprTGe~~~~~~G~~~~~~~l~~L~~fl 230 (305)
+.|+.+..+.|..+.+++.+.|.+.+
T Consensus 102 --~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 102 --KNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp --ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred --eCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 37999988999999998888887765
No 56
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.77 E-value=5.6e-08 Score=74.96 Aligned_cols=97 Identities=13% Similarity=0.121 Sum_probs=73.0
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh--ccEEEEEecCCChhHHHHHHhcCCCCCce
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~--~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~ 198 (305)
-..+|++++.. ..+|.+||+++++||.+|+.+.. .+.++.+ .++.|..++.+. ...+++.|++..+|+
T Consensus 8 ~~~~~~~~~~~--~~~~~v~v~f~a~wC~~C~~~~~------~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt 77 (107)
T 1gh2_A 8 SDPDFQPELSG--AGSRLAVVKFTMRGCGPCLRIAP------AFSSMSNKYPQAVFLEVDVHQ--CQGTAATNNISATPT 77 (107)
T ss_dssp SGGGHHHHHHH--TTTSCEEEEEECSSCHHHHHHHH------HHHHHHHHCTTSEEEEEETTT--SHHHHHHTTCCSSSE
T ss_pred CHHHHHHHHHh--CCCCEEEEEEECCCChhhHHHHH------HHHHHHHHCCCcEEEEEECcc--CHHHHHhcCCCcccE
Confidence 34567777654 57899999999999999999964 3444433 368898888764 456889999999999
Q ss_pred EEEEeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021955 199 VLVIDPITGQKICSWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 199 i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl 230 (305)
+.++. .|+.+..+.|.. ++++.+.|.+.+
T Consensus 78 ~~~~~--~G~~~~~~~G~~-~~~l~~~l~~~l 106 (107)
T 1gh2_A 78 FQFFR--NKVRIDQYQGAD-AVGLEEKIKQHL 106 (107)
T ss_dssp EEEEE--TTEEEEEEESSC-HHHHHHHHHHHH
T ss_pred EEEEE--CCeEEEEEeCCC-HHHHHHHHHHhc
Confidence 99984 699998899954 455666555543
No 57
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.76 E-value=2.8e-08 Score=77.60 Aligned_cols=93 Identities=15% Similarity=0.170 Sum_probs=72.1
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCCCce
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~~P~ 198 (305)
-..+|++++ +.+|++||+++++||..|+.+... +.++.++ ++.|+.++.+. ...++..|++..+|+
T Consensus 15 ~~~~f~~~~----~~~k~vlv~f~a~~C~~C~~~~~~------l~~l~~~~~~v~~~~vd~~~--~~~~~~~~~v~~~Pt 82 (112)
T 1syr_A 15 SQAEFDSII----SQNELVIVDFFAEWCGPCKRIAPF------YEECSKTYTKMVFIKVDVDE--VSEVTEKENITSMPT 82 (112)
T ss_dssp SHHHHHHHH----HHCSEEEEEEECTTCHHHHHHHHH------HHHHHHHCTTSEEEEEETTT--THHHHHHTTCCSSSE
T ss_pred CHHHHHHHH----ccCCeEEEEEECCCCHHHHHHHHH------HHHHHHHcCCCEEEEEECCC--CHHHHHHcCCCcccE
Confidence 345677766 379999999999999999999644 3444433 58888887765 447889999999999
Q ss_pred EEEEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021955 199 VLVIDPITGQKICSWCGMINPQPLGEMLLP 228 (305)
Q Consensus 199 i~IIdprTGe~~~~~~G~~~~~~~l~~L~~ 228 (305)
++|+. .|+.+..+.|. +++++.+.|..
T Consensus 83 ~~~~~--~G~~~~~~~G~-~~~~l~~~l~~ 109 (112)
T 1syr_A 83 FKVYK--NGSSVDTLLGA-NDSALKQLIEK 109 (112)
T ss_dssp EEEEE--TTEEEEEEESC-CHHHHHHHHHT
T ss_pred EEEEE--CCcEEEEEeCC-CHHHHHHHHHH
Confidence 88774 69999899998 88877666554
No 58
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.76 E-value=5.3e-08 Score=74.23 Aligned_cols=96 Identities=17% Similarity=0.253 Sum_probs=73.0
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEE
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVI 202 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~II 202 (305)
.+|++++.. ..+|+++|+++++||..|+.+...+ ..+.+-.+.++.|+.++.+. ...+++.|++..+|+++++
T Consensus 9 ~~~~~~l~~--~~~~~~vv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~ 81 (106)
T 1xwb_A 9 ADLDGQLTK--ASGKLVVLDFFATWCGPCKMISPKL---VELSTQFADNVVVLKVDVDE--CEDIAMEYNISSMPTFVFL 81 (106)
T ss_dssp HHHHHHHHH--HTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTEEEEEEETTT--CHHHHHHTTCCSSSEEEEE
T ss_pred HHHHHHHHh--cCCCEEEEEEECCcCHHHHHhhHHH---HHHHHHhCCCeEEEEEeccc--hHHHHHHcCCCcccEEEEE
Confidence 356666643 4789999999999999999996543 33444454678999887764 4568899999999998877
Q ss_pred eCCCCeeEEEecCCCChHHHHHHHHH
Q 021955 203 DPITGQKICSWCGMINPQPLGEMLLP 228 (305)
Q Consensus 203 dprTGe~~~~~~G~~~~~~~l~~L~~ 228 (305)
. .|+.+..+.| .+++++.+.|.+
T Consensus 82 ~--~G~~~~~~~g-~~~~~l~~~i~~ 104 (106)
T 1xwb_A 82 K--NGVKVEEFAG-ANAKRLEDVIKA 104 (106)
T ss_dssp E--TTEEEEEEES-CCHHHHHHHHHH
T ss_pred c--CCcEEEEEcC-CCHHHHHHHHHH
Confidence 4 6999988999 677776655544
No 59
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.75 E-value=3.9e-09 Score=83.94 Aligned_cols=104 Identities=13% Similarity=0.185 Sum_probs=82.3
Q ss_pred cccccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCC
Q 021955 118 HVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDS 195 (305)
Q Consensus 118 ~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~ 195 (305)
.+--..+|++++..|+..+|+++|+++++||..|+.+.. .+.++.++ ++.|+.++.+. ...+++.|++..
T Consensus 18 ~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~------~l~~~~~~~~~v~~~~v~~~~--~~~~~~~~~v~~ 89 (130)
T 1wmj_A 18 ACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAP------VFAEYAKKFPGAVFLKVDVDE--LKEVAEKYNVEA 89 (130)
T ss_dssp CCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHH------HHHHHHHHCTTBCCEECCTTT--SGGGHHHHTCCS
T ss_pred EcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHH------HHHHHHHHCCCCEEEEEeccc--hHHHHHHcCCCc
Confidence 333456799999999999999999999999999999954 45555554 57787776654 457889999999
Q ss_pred CceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 196 IPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 196 ~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
+|+++|+ +.|+.+..+.| .+++++.+.|...+..
T Consensus 90 ~Pt~~~~--~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 90 MPTFLFI--KDGAEADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp SCCCCBC--TTTTCCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred cceEEEE--eCCeEEEEEeC-CCHHHHHHHHHHHHhc
Confidence 9998877 47888888888 4778888877777754
No 60
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.75 E-value=4.8e-08 Score=76.68 Aligned_cols=94 Identities=18% Similarity=0.277 Sum_probs=73.6
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc-cEEEEEecCCChhHHHHHHhcCCCCCceEEE
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV-NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~-nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~I 201 (305)
.+|++++.. ..+|+++|+++++||..|+.+. +.+.++.++ ++.|..++.+. ...+++.|++..+|+++|
T Consensus 22 ~~~~~~l~~--~~~~~~vv~f~a~wC~~C~~~~------~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~ 91 (117)
T 2xc2_A 22 GDLESLLEQ--HKNKLVVVDFFATWCGPCKTIA------PLFKELSEKYDAIFVKVDVDK--LEETARKYNISAMPTFIA 91 (117)
T ss_dssp THHHHHHHH--TTTSCEEEEEECTTCHHHHHHH------HHHHHHHTTSSSEEEEEETTT--SHHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHh--CCCCEEEEEEECCCCHhHHHHh------HHHHHHHHHcCcEEEEEECCc--cHHHHHHcCCCccceEEE
Confidence 567777653 4789999999999999999995 455666655 67888877654 457889999999999888
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHH
Q 021955 202 IDPITGQKICSWCGMINPQPLGEMLLPF 229 (305)
Q Consensus 202 IdprTGe~~~~~~G~~~~~~~l~~L~~f 229 (305)
+. .|+.+..+.| .+++++.+.|.+.
T Consensus 92 ~~--~G~~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 92 IK--NGEKVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp EE--TTEEEEEEES-SCHHHHHHHHHHH
T ss_pred Ee--CCcEEEEEeC-CCHHHHHHHHHHh
Confidence 74 6999988999 5777766666544
No 61
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.75 E-value=7e-08 Score=76.62 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=77.2
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEE
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~ 200 (305)
..|+.++.....++.+|++||+++++||..|+.+...+ +.+.+-+ .++.|..++.+.. ..+++.|++..+|+++
T Consensus 8 ~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l---~~l~~~~-~~v~~~~vd~~~~--~~~~~~~~i~~~Pt~~ 81 (118)
T 2f51_A 8 FNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQIL---PSIAEAN-KDVTFIKVDVDKN--GNAADAYGVSSIPALF 81 (118)
T ss_dssp ECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHC-TTSEEEEEETTTC--HHHHHHTTCCSSSEEE
T ss_pred ecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHC-CCeEEEEEECCCC--HHHHHhcCCCCCCEEE
Confidence 46677777766777899999999999999999996554 3333333 5789998887653 5688999999999999
Q ss_pred EEeC--CCCeeEEEecCCCChHHHHHHHHHHH
Q 021955 201 VIDP--ITGQKICSWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 201 IIdp--rTGe~~~~~~G~~~~~~~l~~L~~fl 230 (305)
|++. ..|+.+..+.|..+ .++...+.++.
T Consensus 82 ~~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~~ 112 (118)
T 2f51_A 82 FVKKEGNEIKTLDQFVGADV-SRIKADIEKFK 112 (118)
T ss_dssp EEEEETTEEEEEEEEESCCH-HHHHHHHHHHC
T ss_pred EEeCCCCcceEEEeecCCCH-HHHHHHHHHhh
Confidence 9974 13888888999764 34555554443
No 62
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.73 E-value=6.7e-08 Score=77.58 Aligned_cols=97 Identities=13% Similarity=0.040 Sum_probs=75.4
Q ss_pred HHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCC-------------------------hhHHH
Q 021955 132 ALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT-------------------------SEGWK 186 (305)
Q Consensus 132 Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds-------------------------~eg~~ 186 (305)
+.-.+|++||++.++||..|+.+...+ ..+.+-+.+++.|+.++.+. .....
T Consensus 25 ~~~~gk~~lv~f~~~~C~~C~~~~~~l---~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 101 (148)
T 2b5x_A 25 QLIGEKPTLIHFWSISCHLCKEAMPQV---NEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHA 101 (148)
T ss_dssp HHTTTSCEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCH
T ss_pred hhcCCCEEEEEEEcCCCHHHHHHhHHH---HHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchh
Confidence 345789999999999999999985543 22333334447777777653 22346
Q ss_pred HHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 187 VCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 187 ~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
+++.|++..+|++.|||+ .|+.+..+.|..+++++.+.|...+..
T Consensus 102 ~~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 102 LTDAFENEYVPAYYVFDK-TGQLRHFQAGGSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp HHHHTCCCCSSEEEEECT-TCBEEEEEESCSTTHHHHHHHHHHHTT
T ss_pred HHHHhCCCCCCEEEEECC-CCcEEEEecCCCCHHHHHHHHHHHHhc
Confidence 888999999999999997 699999999999999999999888864
No 63
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.72 E-value=4.8e-08 Score=79.66 Aligned_cols=97 Identities=12% Similarity=0.107 Sum_probs=74.4
Q ss_pred HcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChh--------------------HHHHHHhcCC
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE--------------------GWKVCSFYNM 193 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~e--------------------g~~~~~~Y~~ 193 (305)
-.+|++||++.++||..|+.+...+ .....++-+.++.|+.++.+... ...+++.|++
T Consensus 24 ~~gk~vlv~F~~~~C~~C~~~~~~l--~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 101 (151)
T 2f9s_A 24 LKGKGVFLNFWGTWCEPCKKEFPYM--ANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDV 101 (151)
T ss_dssp GTTSEEEEEEECTTCHHHHHHHHHH--HHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTC
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHH--HHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCC
Confidence 3589999999999999999885543 12222333336778777776532 3467888999
Q ss_pred CCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021955 194 DSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (305)
Q Consensus 194 ~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~ 233 (305)
..+|++.|||+ .|+.+..+.|..+++++.+.|...+...
T Consensus 102 ~~~P~~~lid~-~G~i~~~~~G~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 102 SPLPTTFLINP-EGKVVKVVTGTMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp CSSCEEEEECT-TSEEEEEEESCCCHHHHHHHHHHHSCC-
T ss_pred CCCCeEEEECC-CCcEEEEEeCCCCHHHHHHHHHHHHhhh
Confidence 99999999997 6999999999999999999888887643
No 64
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.72 E-value=6.1e-08 Score=81.16 Aligned_cols=91 Identities=13% Similarity=0.093 Sum_probs=75.5
Q ss_pred HcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEe
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSW 213 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~ 213 (305)
+.+|++||+++++||..|+.+...+ +.+.+-+..++.|..++.+. ...++..|++..+|++.|+. .|+.+..+
T Consensus 62 ~~~~~vlv~F~a~wC~~C~~~~p~l---~~la~~~~~~v~~~~vd~~~--~~~l~~~~~i~~~Pt~~~~~--~G~~~~~~ 134 (155)
T 2ppt_A 62 RDDLPLLVDFWAPWCGPCRQMAPQF---QAAAATLAGQVRLAKIDTQA--HPAVAGRHRIQGIPAFILFH--KGRELARA 134 (155)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTCEEEEEETTT--STHHHHHTTCCSSSEEEEEE--TTEEEEEE
T ss_pred hCCCcEEEEEECCCCHHHHHHHHHH---HHHHHHccCCEEEEEEeCCc--cHHHHHHcCCCcCCEEEEEe--CCeEEEEe
Confidence 7789999999999999999997554 34555555578899887764 34688999999999999994 69999999
Q ss_pred cCCCChHHHHHHHHHHHh
Q 021955 214 CGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 214 ~G~~~~~~~l~~L~~fl~ 231 (305)
.|..+.+++.+.|.+.+.
T Consensus 135 ~G~~~~~~l~~~l~~~l~ 152 (155)
T 2ppt_A 135 AGARPASELVGFVRGKLG 152 (155)
T ss_dssp ESCCCHHHHHHHHHHHHC
T ss_pred cCCCCHHHHHHHHHHHhc
Confidence 999999998888887765
No 65
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.71 E-value=1.6e-08 Score=79.42 Aligned_cols=90 Identities=19% Similarity=0.158 Sum_probs=71.4
Q ss_pred HHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEE
Q 021955 132 ALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKIC 211 (305)
Q Consensus 132 Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~ 211 (305)
..+.+|.+||+++++||..|+.+...+ +.+.+-...++.|..++.+. ...+++.|++..+|+++|+. .|+.+.
T Consensus 26 ~~~~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~i~~~Pt~~~~~--~g~~~~ 98 (121)
T 2i1u_A 26 VLSSNKPVLVDFWATWCGPCKMVAPVL---EEIATERATDLTVAKLDVDT--NPETARNFQVVSIPTLILFK--DGQPVK 98 (121)
T ss_dssp TTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEE--TTEEEE
T ss_pred HHhCCCcEEEEEECCCCHHHHHHHHHH---HHHHHHhcCCeEEEEEECCC--CHHHHHhcCCCcCCEEEEEE--CCEEEE
Confidence 345789999999999999999997654 44555555578898888764 45688999999999998885 699988
Q ss_pred EecCCCChHHHHHHHHH
Q 021955 212 SWCGMINPQPLGEMLLP 228 (305)
Q Consensus 212 ~~~G~~~~~~~l~~L~~ 228 (305)
.+.|..+.+++.+.|.+
T Consensus 99 ~~~G~~~~~~l~~~l~~ 115 (121)
T 2i1u_A 99 RIVGAKGKAALLRELSD 115 (121)
T ss_dssp EEESCCCHHHHHHHTCS
T ss_pred EecCCCCHHHHHHHHHH
Confidence 89999888876655543
No 66
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.71 E-value=8.9e-08 Score=79.44 Aligned_cols=98 Identities=17% Similarity=0.215 Sum_probs=76.1
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCCCceE
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPAV 199 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i 199 (305)
...|++++..+ .+|++||+++.+||..|+.+.. .+.++.++ ++.|..++.+. ...+++.|++..+|++
T Consensus 20 ~~~~~~~~~~~--~~~~vvv~F~a~wC~~C~~~~p------~l~~l~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~ 89 (153)
T 2wz9_A 20 AGQFEELLRLK--AKSLLVVHFWAPWAPQCAQMNE------VMAELAKELPQVSFVKLEAEG--VPEVSEKYEISSVPTF 89 (153)
T ss_dssp HHHHHHHHHHT--TTSCEEEEEECTTCHHHHHHHH------HHHHHHHHCTTSEEEEEETTT--SHHHHHHTTCCSSSEE
T ss_pred HHHHHHHHHhc--CCCeEEEEEECCCCHhHHHHHH------HHHHHHHHcCCeEEEEEECCC--CHHHHHHcCCCCCCEE
Confidence 34566655432 4899999999999999999954 44555443 68899887765 4568899999999999
Q ss_pred EEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 200 LVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 200 ~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
+|++ .|+.+..+.|. +++++.+.|.+.+..
T Consensus 90 ~~~~--~G~~~~~~~G~-~~~~l~~~i~~~l~~ 119 (153)
T 2wz9_A 90 LFFK--NSQKIDRLDGA-HAPELTKKVQRHASS 119 (153)
T ss_dssp EEEE--TTEEEEEEESS-CHHHHHHHHHHHSCT
T ss_pred EEEE--CCEEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 9999 69998888895 777777777777654
No 67
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.71 E-value=4.8e-08 Score=77.15 Aligned_cols=90 Identities=13% Similarity=0.063 Sum_probs=70.5
Q ss_pred HcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCC---------------------hhHHHHHHh
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDT---------------------SEGWKVCSF 190 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds---------------------~eg~~~~~~ 190 (305)
-.+|++||++.++||..|+.+. +.+.++.++ ++.|+.++.+. .....+++.
T Consensus 23 ~~~k~~ll~f~~~~C~~C~~~~------~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 96 (136)
T 1zzo_A 23 LLGKPAVLWFWAPWCPTCQGEA------PVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWAN 96 (136)
T ss_dssp GTTSCEEEEEECTTCHHHHHHH------HHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHH
T ss_pred hCCCeEEEEEEcCCChhHHHHH------HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHH
Confidence 3589999999999999999985 444444433 67777777654 223567888
Q ss_pred cCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 191 YNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 191 Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
|++..+|++.|||+ .|+.+ .+.|..+.+++.+.|.+.+.
T Consensus 97 ~~i~~~P~~~~id~-~g~i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 97 FGVTQQPAYAFVDP-HGNVD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp TTCCSSSEEEEECT-TCCEE-EEESCCCHHHHHHHHHHHC-
T ss_pred cCCCCCceEEEECC-CCCEE-EEecCCCHHHHHHHHHHHhc
Confidence 99999999999997 68888 88999999998888887664
No 68
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.70 E-value=5.2e-08 Score=79.76 Aligned_cols=95 Identities=17% Similarity=0.055 Sum_probs=74.7
Q ss_pred HcCCeEEEEeecCCCccchhhhhccCCCHHHHHHh----hccEEEEEecCCCh----------------------hHHHH
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII----SVNFIFWQEYDDTS----------------------EGWKV 187 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i----~~nFIfwq~~~ds~----------------------eg~~~ 187 (305)
-++|++||++..+||.+|+.+- +.+.++. ..++.|+.++.|+. +...+
T Consensus 22 ~~gk~vlv~F~a~wC~~C~~~~------~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (151)
T 3raz_A 22 LKAPVRIVNLWATWCGPCRKEM------PAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNF 95 (151)
T ss_dssp CCSSEEEEEEECTTCHHHHHHH------HHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHH
T ss_pred hCCCEEEEEEEcCcCHHHHHHH------HHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHH
Confidence 3689999999999999999885 3444443 34688888888753 34557
Q ss_pred HHhcC--CCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCCC
Q 021955 188 CSFYN--MDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSPR 235 (305)
Q Consensus 188 ~~~Y~--~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~~~ 235 (305)
+..|+ +..+|++.|||+ .|+.+..+.|..+++++.+.|.......+.
T Consensus 96 ~~~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~l~~~~~~ 144 (151)
T 3raz_A 96 MKTYGNTVGVLPFTVVEAP-KCGYRQTITGEVNEKSLTDAVKLAHSKCRE 144 (151)
T ss_dssp HHTTTCCSCCSSEEEEEET-TTTEEEECCSCCCHHHHHHHHHHHHTC---
T ss_pred HHHhCCccCCCCEEEEECC-CCcEEEEECCCCCHHHHHHHHHHHHHHhhc
Confidence 77888 889999999997 699999999999999999988888776544
No 69
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.69 E-value=4.4e-08 Score=77.19 Aligned_cols=101 Identities=8% Similarity=0.034 Sum_probs=77.7
Q ss_pred HHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCC
Q 021955 126 EKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPI 205 (305)
Q Consensus 126 ~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdpr 205 (305)
++......+.+|++||+++++||..|+.+...+ ..+.+.+..++.|..++.+. ...++..|++..+|++.+++.
T Consensus 11 ~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~---~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~- 84 (122)
T 3aps_A 11 QTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEF---ELLARMIKGKVRAGKVDCQA--YPQTCQKAGIKAYPSVKLYQY- 84 (122)
T ss_dssp HHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEEE-
T ss_pred HHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHH---HHHHHHhcCCeEEEEEeCcC--CHHHHHHcCCCccceEEEEeC-
Confidence 333344557799999999999999999997644 44555556689999887765 346889999999999999985
Q ss_pred CCeeEEEecCC----CChHHHHHHHHHHHhhC
Q 021955 206 TGQKICSWCGM----INPQPLGEMLLPFMDRS 233 (305)
Q Consensus 206 TGe~~~~~~G~----~~~~~~l~~L~~fl~~~ 233 (305)
|..+..+.|. .+++++.+.|...+...
T Consensus 85 -~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 115 (122)
T 3aps_A 85 -ERAKKSIWEEQINSRDAKTIAALIYGKLETL 115 (122)
T ss_dssp -EGGGTEEEEEEECCSCHHHHHHHHHHHHHCC
T ss_pred -CCccceeeccccCcCCHHHHHHHHHHHHHhh
Confidence 3335556665 78999999998888754
No 70
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.69 E-value=1e-07 Score=77.47 Aligned_cols=98 Identities=11% Similarity=0.104 Sum_probs=75.6
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHh-hccEEEEEecCCChhH---------------------HHHHHhcC
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII-SVNFIFWQEYDDTSEG---------------------WKVCSFYN 192 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i-~~nFIfwq~~~ds~eg---------------------~~~~~~Y~ 192 (305)
.+|++||++.++||..|+.+...+ ..+.+-+ +.++.|..++.+.... ..+++.|+
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l---~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 105 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPAL---KELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYL 105 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHH---HHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTT
T ss_pred CCCEEEEEEECCcCHhHHHHhHHH---HHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcC
Confidence 589999999999999999885433 1222222 2358888888776531 26788899
Q ss_pred CCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCCCC
Q 021955 193 MDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSPRK 236 (305)
Q Consensus 193 ~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~~~~ 236 (305)
+..+|++.|||+ .|+.+..+.|..+++++.+.|...+...+..
T Consensus 106 v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~~~~~~~~~ 148 (152)
T 2lja_A 106 INGIPRFILLDR-DGKIISANMTRPSDPKTAEKFNELLGLEGHH 148 (152)
T ss_dssp CCSSCCEEEECT-TSCEEESSCCCTTCHHHHHHHHHHHTCCSSS
T ss_pred cCCCCEEEEECC-CCeEEEccCCCCCHHHHHHHHHHHhcccccc
Confidence 999999999997 6999888889889999999998888765543
No 71
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.69 E-value=9.6e-08 Score=75.49 Aligned_cols=90 Identities=16% Similarity=0.171 Sum_probs=67.9
Q ss_pred HHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCCCceEEEEe
Q 021955 126 EKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVID 203 (305)
Q Consensus 126 ~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IId 203 (305)
.+.+..+.+.+|++||+++++||..|+.+.. .+.++.++ ++.|..++.+. ...+++.|++..+|+++|+
T Consensus 20 ~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p------~l~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~- 90 (114)
T 2oe3_A 20 LTEFRNLIKQNDKLVIDFYATWCGPCKMMQP------HLTKLIQAYPDVRFVKCDVDE--SPDIAKECEVTAMPTFVLG- 90 (114)
T ss_dssp HHHHHHHHHHCSEEEEEEECTTCHHHHHTHH------HHHHHHHHCTTSEEEEEETTT--CHHHHHHTTCCSBSEEEEE-
T ss_pred HHHHHHHHhCCCEEEEEEECCCCHHHHHHHH------HHHHHHHHCCCCEEEEEECCC--CHHHHHHCCCCcccEEEEE-
Confidence 3444455668999999999999999999964 34444433 37788887764 3468899999999998876
Q ss_pred CCCCeeEEEecCCCChHHHHHHH
Q 021955 204 PITGQKICSWCGMINPQPLGEML 226 (305)
Q Consensus 204 prTGe~~~~~~G~~~~~~~l~~L 226 (305)
+.|+.+..+.|.. ++++.+.|
T Consensus 91 -~~G~~~~~~~G~~-~~~l~~~l 111 (114)
T 2oe3_A 91 -KDGQLIGKIIGAN-PTALEKGI 111 (114)
T ss_dssp -ETTEEEEEEESSC-HHHHHHHH
T ss_pred -eCCeEEEEEeCCC-HHHHHHHH
Confidence 3699999999987 66655444
No 72
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.69 E-value=1.1e-07 Score=82.98 Aligned_cols=111 Identities=12% Similarity=0.155 Sum_probs=85.4
Q ss_pred hhCCCcccc--ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHH
Q 021955 112 LYRPPFHVM--FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCS 189 (305)
Q Consensus 112 lFrPP~~l~--~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~ 189 (305)
+|.+...+. -..+|+.++ ..+|++||+++++||..|+.+...+ ..+.+-++.++.|..++.+. ...++.
T Consensus 92 ~~~~~~~v~~l~~~~f~~~~----~~~~~vlv~F~a~wC~~C~~~~p~~---~~l~~~~~~~v~~~~vd~~~--~~~l~~ 162 (210)
T 3apq_A 92 IYDDDPEIITLERREFDAAV----NSGELWFVNFYSPGCSHCHDLAPTW---REFAKEVDGLLRIGAVNCGD--DRMLCR 162 (210)
T ss_dssp TTTTCTTSEECCHHHHHHHH----HHSCCEEEEEECTTCHHHHHHHHHH---HHHHHHTBTTBEEEEEETTT--CHHHHH
T ss_pred ccCCCCceEEecHHHHHHHH----ccCCcEEEEEeCCCChhHHHHHHHH---HHHHHHhcCceEEEEEECCc--cHHHHH
Confidence 444444432 234466655 6789999999999999999996543 44555556678999887765 457899
Q ss_pred hcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021955 190 FYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (305)
Q Consensus 190 ~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~ 233 (305)
.|++..+|+++|+ ..|+.+..+.|..+.+++.+.|.+.+...
T Consensus 163 ~~~v~~~Pt~~~~--~~G~~~~~~~G~~~~~~l~~~i~~~l~~~ 204 (210)
T 3apq_A 163 MKGVNSYPSLFIF--RSGMAAVKYNGDRSKESLVAFAMQHVRST 204 (210)
T ss_dssp HTTCCSSSEEEEE--CTTSCCEECCSCCCHHHHHHHHHHHHHCC
T ss_pred HcCCCcCCeEEEE--ECCCceeEecCCCCHHHHHHHHHHhCccc
Confidence 9999999999999 46898888999999999999888888653
No 73
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.68 E-value=8.2e-08 Score=87.06 Aligned_cols=102 Identities=15% Similarity=0.212 Sum_probs=80.4
Q ss_pred cccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceE
Q 021955 120 MFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAV 199 (305)
Q Consensus 120 ~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i 199 (305)
+-..+|++.+ ....+|++||+|+.+||.+|+.+...+ +.+.+-...+++|..++.+. ...+++.|++..+|++
T Consensus 12 ~~~~~f~~~~--~~~~~~~v~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~ 84 (287)
T 3qou_A 12 INESNLQQVL--EQSMTTPVLFYFWSERSQHCLQLTPIL---ESLAAQYNGQFILAKLDCDA--EQMIAAQFGLRAIPTV 84 (287)
T ss_dssp CCTTTHHHHH--TTTTTSCEEEEEECTTCTTTTTTHHHH---HHHHHHHTSSSEEEEEETTT--CHHHHHTTTCCSSSEE
T ss_pred CCHHHHHHHH--HhcCCCeEEEEEECCCChHHHHHHHHH---HHHHHHcCCCeEEEEEeCcc--CHHHHHHcCCCCCCeE
Confidence 3456788755 234589999999999999999996543 34444455579999998775 4578999999999999
Q ss_pred EEEeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021955 200 LVIDPITGQKICSWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 200 ~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl 230 (305)
.++. .|+.+..+.|..+.+.+...|...+
T Consensus 85 ~~~~--~G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 85 YLFQ--NGQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp EEEE--TTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred EEEE--CCEEEEEeeCCCCHHHHHHHHHHHc
Confidence 9994 6999999999998888877777665
No 74
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.67 E-value=6.3e-08 Score=76.80 Aligned_cols=89 Identities=12% Similarity=0.034 Sum_probs=69.6
Q ss_pred HcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCCh--------------------hHHHHHHhc
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTS--------------------EGWKVCSFY 191 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~--------------------eg~~~~~~Y 191 (305)
-.+|++||++.++||..|+.+. +.+.++.++ ++.|+.++.+.. ....+++.|
T Consensus 22 ~~~k~~lv~f~~~~C~~C~~~~------~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 95 (136)
T 1lu4_A 22 LQGKPAVLWFWTPWCPFCNAEA------PSLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARY 95 (136)
T ss_dssp GTTSCEEEEEECTTCHHHHHHH------HHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHT
T ss_pred hCCCEEEEEEECCcChhHHHHH------HHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhc
Confidence 3589999999999999999985 444444443 677888777652 135677889
Q ss_pred CCCCCceEEEEeCCCCeeEEEec---CCCChHHHHHHHHHHH
Q 021955 192 NMDSIPAVLVIDPITGQKICSWC---GMINPQPLGEMLLPFM 230 (305)
Q Consensus 192 ~~~~~P~i~IIdprTGe~~~~~~---G~~~~~~~l~~L~~fl 230 (305)
++..+|++.|||+ .|+.+ .+. |..+++++.+.|.+.+
T Consensus 96 ~i~~~P~~~lid~-~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 96 NVPWQPAFVFYRA-DGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp TCCSSSEEEEECT-TSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred CCCCCCEEEEECC-CCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 9999999999997 68888 888 9999988888777654
No 75
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.67 E-value=1.8e-07 Score=70.94 Aligned_cols=94 Identities=15% Similarity=0.229 Sum_probs=71.5
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCCCceEE
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~ 200 (305)
..|++++.. ..+|.++|+++++||..|+.+.. .+.++.++ ++.|+.++.+. ...+++.|++..+|+++
T Consensus 8 ~~~~~~l~~--~~~~~~~v~f~~~~C~~C~~~~~------~l~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~ 77 (104)
T 2vim_A 8 ADLEKLINE--NKGRLIVVDFFAQWCGPCRNIAP------KVEALAKEIPEVEFAKVDVDQ--NEEAAAKYSVTAMPTFV 77 (104)
T ss_dssp HHHHHHHHT--TTTSCEEEEEECTTCHHHHHHHH------HHHHHHHHCTTSEEEEEETTT--CHHHHHHTTCCSSSEEE
T ss_pred HHHHHHHHh--cCCCeEEEEEECCCCHHHHHhhH------HHHHHHHHCCCCEEEEEeccC--CHHHHHHcCCccccEEE
Confidence 345555532 37899999999999999999964 34444443 68888887764 45688999999999988
Q ss_pred EEeCCCCeeEEEecCCCChHHHHHHHHHH
Q 021955 201 VIDPITGQKICSWCGMINPQPLGEMLLPF 229 (305)
Q Consensus 201 IIdprTGe~~~~~~G~~~~~~~l~~L~~f 229 (305)
++. .|+.+..+.| .+++++.+.|.+.
T Consensus 78 ~~~--~g~~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 78 FIK--DGKEVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp EEE--TTEEEEEEES-SCHHHHHHHHHHH
T ss_pred EEe--CCcEEEEEeC-CCHHHHHHHHHhh
Confidence 886 6999989999 5888776666554
No 76
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.67 E-value=1.1e-07 Score=77.34 Aligned_cols=99 Identities=15% Similarity=0.239 Sum_probs=73.4
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEE
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~I 201 (305)
..+|.+++. +.++ +||+++++||..|+.+...+ ..+.+-...++.|+.++.+. ...+++.|++..+|+++|
T Consensus 40 ~~~~~~~~~---~~~~-vvv~f~~~~C~~C~~~~~~l---~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~ 110 (140)
T 1v98_A 40 EKGFAQEVA---GAPL-TLVDFFAPWCGPCRLVSPIL---EELARDHAGRLKVVKVNVDE--HPGLAARYGVRSVPTLVL 110 (140)
T ss_dssp ------------CCCE-EEEEEECTTCHHHHHHHHHH---HHHHHHTTTTEEEEEEETTT--CHHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHH---cCCC-EEEEEECCCCHHHHHHHHHH---HHHHHHccCceEEEEEECCC--CHHHHHHCCCCccCEEEE
Confidence 334544443 4456 99999999999999997554 34555555578999888765 456889999999999999
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 202 IDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 202 IdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
+. .|+.+..+.|..+.+++.+.|...++
T Consensus 111 ~~--~G~~~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 111 FR--RGAPVATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp EE--TTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred Ee--CCcEEEEEeCCCCHHHHHHHHHHHHc
Confidence 94 69999999999999998888888775
No 77
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.65 E-value=1e-07 Score=75.74 Aligned_cols=96 Identities=18% Similarity=0.241 Sum_probs=72.6
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc-cEEEEEecCCChhHHHHHHhcCCCCCceEEE
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV-NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~-nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~I 201 (305)
.+|++++ +.+|.+||++.++||..|+.+...+ ..+.+-+.. ++.|+.++.+. ...++..|++..+|+++|
T Consensus 24 ~~f~~~l----~~~k~vvv~f~a~~C~~C~~~~~~l---~~l~~~~~~~~v~~~~vd~d~--~~~~~~~~~v~~~Pt~~~ 94 (121)
T 2j23_A 24 DQFKQVT----GGDKVVVIDFWATWCGPCKMIGPVF---EKISDTPAGDKVGFYKVDVDE--QSQIAQEVGIRAMPTFVF 94 (121)
T ss_dssp HHHHHHH----SSSSCEEEEEECTTCSTHHHHHHHH---HHHHTSTHHHHSEEEEEETTT--CHHHHHHHTCCSSSEEEE
T ss_pred HHHHHHH----cCCCEEEEEEECCCCHhHHHHHHHH---HHHHHHCcCCcEEEEEEECcC--CHHHHHHcCCCcccEEEE
Confidence 3455544 7899999999999999999996543 223333332 38888887765 346889999999999998
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021955 202 IDPITGQKICSWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 202 IdprTGe~~~~~~G~~~~~~~l~~L~~fl 230 (305)
+. .|+.+..+.|. +++++.+.|.+.+
T Consensus 95 ~~--~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 95 FK--NGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EE--TTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred EE--CCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 85 69999889998 8888777766543
No 78
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.64 E-value=8.2e-08 Score=84.69 Aligned_cols=103 Identities=17% Similarity=0.196 Sum_probs=82.3
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEE
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~I 201 (305)
..+|++++ .+.+|++||+++++||.+|+.+...+ +.+.+.++.++.|..++.+. ...++..|++..+|+++|
T Consensus 19 ~~~f~~~v---~~~~k~vvv~F~a~wC~~C~~~~p~l---~~l~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~ 90 (222)
T 3dxb_A 19 DDSFDTDV---LKADGAILVDFWAEWCGPCKMIAPIL---DEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLL 90 (222)
T ss_dssp TTTHHHHH---TTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTT--CTTTGGGGTCCSBSEEEE
T ss_pred HHHHHHHH---HhcCCEEEEEEECCcCHHHHHHHHHH---HHHHHHhcCCcEEEEEECCC--CHHHHHHcCCCcCCEEEE
Confidence 44566544 45799999999999999999996544 45555556668888887765 345788999999999999
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021955 202 IDPITGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (305)
Q Consensus 202 IdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~~ 234 (305)
+. .|+.+..+.|..+.+++.+.|...+....
T Consensus 91 ~~--~G~~~~~~~G~~~~~~l~~~l~~~l~~~~ 121 (222)
T 3dxb_A 91 FK--NGEVAATKVGALSKGQLKEFLDANLAGSA 121 (222)
T ss_dssp EE--TTEEEEEEESCCCHHHHHHHHHHHSCCSC
T ss_pred EE--CCeEEEEeccccChHHHHHHHHhhccccc
Confidence 96 69999999999999999999998886543
No 79
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.63 E-value=1e-07 Score=74.51 Aligned_cols=96 Identities=8% Similarity=0.099 Sum_probs=72.6
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCCCce
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~~P~ 198 (305)
-..+| +++ .++|.+||+++++||..|+.+. +.+.++.++ ++.|..++.+ +...+++.|++..+|+
T Consensus 9 ~~~~f-~~~----~~~~~~vv~f~a~wC~~C~~~~------~~l~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~Pt 75 (110)
T 2l6c_A 9 TEAGM-AHF----EGLSDAIVFFHKNLCPHCKNME------KVLDKFGARAPQVAISSVDSE--ARPELMKELGFERVPT 75 (110)
T ss_dssp GGCSH-HHH----TTCSEEEEEEECSSCSTHHHHH------HHHHHHHTTCTTSCEEEEEGG--GCHHHHHHTTCCSSCE
T ss_pred CHHHH-HHH----HcCCCEEEEEECCCCHhHHHHH------HHHHHHHHHCCCcEEEEEcCc--CCHHHHHHcCCcccCE
Confidence 34556 443 4679999999999999999994 445555544 4667776654 4567899999999999
Q ss_pred EEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 199 VLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 199 i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
++|+ +.|+.+..+.|..++++|.+.|..+..
T Consensus 76 ~~~~--~~G~~v~~~~G~~~~~~l~~~~~~~~~ 106 (110)
T 2l6c_A 76 LVFI--RDGKVAKVFSGIMNPRELQALYASIHH 106 (110)
T ss_dssp EEEE--ESSSEEEEEESCCCHHHHHHHHHTC--
T ss_pred EEEE--ECCEEEEEEcCCCCHHHHHHHHHHHhh
Confidence 9999 369999999999999987776665543
No 80
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.63 E-value=2e-07 Score=74.40 Aligned_cols=95 Identities=11% Similarity=0.051 Sum_probs=71.5
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHh--------hccEEEEEecCCChhHHHHHHhcC
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII--------SVNFIFWQEYDDTSEGWKVCSFYN 192 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i--------~~nFIfwq~~~ds~eg~~~~~~Y~ 192 (305)
-..+|++.+. +.+|++||+++++||.+|+.|.. .+.++- +.+++|..++.+. ...+++.|+
T Consensus 21 ~~~~f~~~~~---~~~~~vlv~F~a~wC~~C~~~~p------~~~~la~~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~ 89 (127)
T 3h79_A 21 TDETFDSIVM---DPEKDVFVLYYVPWSRHSVAAMR------LWDDLSMSQSQKRNHLTFVAARIDGEK--YPDVIERMR 89 (127)
T ss_dssp CTTTHHHHHT---CTTCEEEEEEECTTCHHHHHHHH------HHHHHHHHHHTSTTTTTEEEEEEETTT--CHHHHHHTT
T ss_pred ChhhHHHHHh---CCCCCEEEEEECCccHHHHHHhH------HHHHHHHHHHhcccCCCeEEEEEEccc--cHhHHHhcC
Confidence 3456776654 45899999999999999999954 444432 2468999887764 567899999
Q ss_pred CCCCceEEEEeCCCCeeE--EEecCCCChHHHHHHHHH
Q 021955 193 MDSIPAVLVIDPITGQKI--CSWCGMINPQPLGEMLLP 228 (305)
Q Consensus 193 ~~~~P~i~IIdprTGe~~--~~~~G~~~~~~~l~~L~~ 228 (305)
+..||++.++.+ |..+ ..+.|..+.+.+++.|.+
T Consensus 90 v~~~Pt~~~~~~--g~~~~~~~~~G~~~~~~l~~~i~~ 125 (127)
T 3h79_A 90 VSGFPTMRYYTR--IDKQEPFEYSGQRYLSLVDSFVFQ 125 (127)
T ss_dssp CCSSSEEEEECS--SCSSSCEECCSCCCHHHHHHHHHH
T ss_pred CccCCEEEEEeC--CCCCCceEecCCccHHHHHHHHHh
Confidence 999999999985 4433 568898888876665543
No 81
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=98.63 E-value=5.7e-08 Score=78.99 Aligned_cols=98 Identities=10% Similarity=0.084 Sum_probs=72.4
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc-cEEEEEecCCChhHHHHHHhcCCCCCceEEE
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV-NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~-nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~I 201 (305)
..|++++. ...+|++||+++++||.+|+.+. +.+.++.++ +++|+.++.+. ...+++.|++..+|+++|
T Consensus 29 ~~~~~~l~--~~~~k~vvv~F~a~wC~~C~~~~------p~l~~l~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~ 98 (133)
T 3cxg_A 29 GSLNQVFS--STQNSSIVIKFGAVWCKPCNKIK------EYFKNQLNYYYVTLVDIDVDI--HPKLNDQHNIKALPTFEF 98 (133)
T ss_dssp THHHHHHT--C-CCSEEEEEEECTTCHHHHHTH------HHHHGGGGTEECEEEEEETTT--CHHHHHHTTCCSSSEEEE
T ss_pred hHHHHHHH--hcCCCEEEEEEECCCCHHHHHHH------HHHHHHHHhcCEEEEEEeccc--hHHHHHhcCCCCCCEEEE
Confidence 44555553 23479999999999999999984 444554443 46788777654 467889999999999999
Q ss_pred EeCCCCe--eEEEecCCCChHHHHHHHHHHHh
Q 021955 202 IDPITGQ--KICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 202 IdprTGe--~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
+....|+ .+..+.|. +++++.+.|.+.+.
T Consensus 99 ~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 99 YFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp EEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred EEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 9312466 77888898 78888888777664
No 82
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.62 E-value=4.9e-08 Score=75.76 Aligned_cols=95 Identities=13% Similarity=0.108 Sum_probs=71.9
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh------ccEEEEEecCCChhHHHHHHhcCCC
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS------VNFIFWQEYDDTSEGWKVCSFYNMD 194 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~------~nFIfwq~~~ds~eg~~~~~~Y~~~ 194 (305)
-..+|++++ +.+|++||+++++||..|+.+.. .+.++.+ .+++|..++.+. ...+++.|++.
T Consensus 13 ~~~~~~~~~----~~~~~~lv~f~~~~C~~C~~~~~------~~~~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~ 80 (120)
T 1mek_A 13 RKSNFAEAL----AAHKYLLVEFYAPWCGHCKALAP------EYAKAAGKLKAEGSEIRLAKVDATE--ESDLAQQYGVR 80 (120)
T ss_dssp CTTTHHHHH----HHCSEEEEEEECSSCSTTSTTHH------HHHHHHHTTTTTCCCCBCEEEETTT--CCSSHHHHTCC
T ss_pred chhhHHHHH----ccCCeEEEEEECCCCHHHHHhhH------HHHHHHHHHhccCCcEEEEEEcCCC--CHHHHHHCCCC
Confidence 456677665 36899999999999999999954 3444433 257888776654 34788899999
Q ss_pred CCceEEEEeCCCCeeE--EEecCCCChHHHHHHHHHH
Q 021955 195 SIPAVLVIDPITGQKI--CSWCGMINPQPLGEMLLPF 229 (305)
Q Consensus 195 ~~P~i~IIdprTGe~~--~~~~G~~~~~~~l~~L~~f 229 (305)
.+|++.++. .|+.+ ..+.|..+.+++.+.|.+.
T Consensus 81 ~~Pt~~~~~--~g~~~~~~~~~g~~~~~~l~~~l~~~ 115 (120)
T 1mek_A 81 GYPTIKFFR--NGDTASPKEYTAGREADDIVNWLKKR 115 (120)
T ss_dssp SSSEEEEEE--SSCSSSCEECCCCSSHHHHHHHHHTT
T ss_pred cccEEEEEe--CCCcCCcccccCccCHHHHHHHHHhc
Confidence 999999994 58876 7788988888776666543
No 83
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.62 E-value=8.4e-08 Score=76.76 Aligned_cols=88 Identities=9% Similarity=0.023 Sum_probs=68.1
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh-ccEEEEEecCCCh-----------------------hHHHHHHh
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS-VNFIFWQEYDDTS-----------------------EGWKVCSF 190 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~-~nFIfwq~~~ds~-----------------------eg~~~~~~ 190 (305)
.+|++||++.++||..|+.+...+ ..+.+-+. .++.|+.++.+.. ....+++.
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQF---QSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKE 109 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHH---HHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHH---HHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHh
Confidence 689999999999999999985433 12222222 4677888877641 23468889
Q ss_pred cCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHH
Q 021955 191 YNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEML 226 (305)
Q Consensus 191 Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L 226 (305)
|++..+|++.|||+ .|+.+..+.|..+.+++.+.|
T Consensus 110 ~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 110 YHIITIPTSFLLNE-KGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp TTCCEESEEEEECT-TCCEEEEEESCCCHHHHHHHH
T ss_pred cCcCccCeEEEEcC-CCcEEEEEcCCcCHHHHHHhh
Confidence 99999999999997 699999999999998877655
No 84
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.62 E-value=5.4e-08 Score=79.85 Aligned_cols=96 Identities=14% Similarity=0.106 Sum_probs=72.5
Q ss_pred HHHHHcCCeEEEEeecCCCccchh-hhhccCCCHHHHHHhh----ccEEEEEecCC-------Chh--------------
Q 021955 130 DAALAQDKWLLVNLQSTKEFSSLM-LNRDTWGNEAVSQIIS----VNFIFWQEYDD-------TSE-------------- 183 (305)
Q Consensus 130 ~~Ak~~~KwLLVniq~~~~f~c~~-lnRDvw~n~~V~~~i~----~nFIfwq~~~d-------s~e-------------- 183 (305)
..+.-.+|++||++..+||.+|.. +- +.+.++.+ .++.|+.++.+ +.+
T Consensus 24 ~l~~~~gk~vlv~F~a~~C~~C~~e~~------~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (160)
T 3lor_A 24 SNEDLRGKVVVVEVFQMLCPGCVNHGV------PQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFP 97 (160)
T ss_dssp CHHHHTTSEEEEEEECTTCHHHHHTHH------HHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSC
T ss_pred CHHHhCCCEEEEEEEcCCCcchhhhhh------HHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCc
Confidence 344456999999999999999987 43 33333332 35777777652 111
Q ss_pred -----HH------HHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 184 -----GW------KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 184 -----g~------~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
.. .+++.|++..+|++.|||+ .|+.+..+.|..+++++.+.|...|.+
T Consensus 98 ~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 98 VAVDMPREGQRIPSTMKKYRLEGTPSIILADR-KGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp EEEECCCTTCSSCHHHHHTTCCSSSEEEEECT-TSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred EEECCccccchhhhHHHhcccCccceEEEECC-CCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 11 2788899999999999997 699999999999999999999988865
No 85
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.62 E-value=1.1e-07 Score=80.69 Aligned_cols=92 Identities=15% Similarity=0.143 Sum_probs=76.0
Q ss_pred HcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCC-hh--------------------HHHHHHhcC
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT-SE--------------------GWKVCSFYN 192 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds-~e--------------------g~~~~~~Y~ 192 (305)
-.+|++||++..+||..|+.. -+.+.++.++++.++.++.+. .+ ...++..|.
T Consensus 56 ~~gk~vll~F~a~~C~~C~~~------~~~l~~l~~~~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 129 (176)
T 3kh7_A 56 LKGKPALVNVWGTWCPSCRVE------HPELTRLAEQGVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLG 129 (176)
T ss_dssp GCSSCEEEEEECTTCHHHHHH------HHHHHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHT
T ss_pred hCCCEEEEEEECCcCHHHHHH------HHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcC
Confidence 358999999999999999988 467788888888888887432 21 235667788
Q ss_pred CCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 193 MDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 193 ~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
+..+|++.|||+ .|+.+..+.|..+++++.+.|...++.
T Consensus 130 v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~~l~~ 168 (176)
T 3kh7_A 130 VYGAPETYLIDK-QGIIRHKIVGVVDQKVWREQLAPLYQQ 168 (176)
T ss_dssp CCSSCEEEEECT-TCBEEEEEESCCCHHHHHHHTHHHHHH
T ss_pred CCCCCeEEEECC-CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 899999999997 699999999999999999999888875
No 86
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.61 E-value=1.2e-07 Score=78.94 Aligned_cols=97 Identities=14% Similarity=0.230 Sum_probs=75.9
Q ss_pred cHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh---ccEEEEEecCCChhHHHHHHhcCCCCCceEE
Q 021955 124 SFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS---VNFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (305)
Q Consensus 124 sf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~---~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~ 200 (305)
+|++++. ...+|++||+++.+||.+|+.+. +.+.++.+ .++.|+.++.+. ...++..|++..+|+++
T Consensus 13 ~~~~~i~--~~~~k~vlv~F~a~WC~~C~~~~------p~l~~l~~~~~~~~~~~~vd~d~--~~~l~~~~~v~~~Pt~~ 82 (149)
T 3gix_A 13 EVDQAIK--STAEKVLVLRFGRDEDPVCLQLD------DILSKTSSDLSKMAAIYLVDVDQ--TAVYTQYFDISYIPSTV 82 (149)
T ss_dssp HHHHHHH--HCCSSEEEEEEECTTSHHHHHHH------HHHHHHHTTTTTTEEEEEEETTT--CCHHHHHTTCCSSSEEE
T ss_pred HHHHHHH--hcCCCEEEEEEECCCCHHHHHHH------HHHHHHHHHccCceEEEEEECCc--CHHHHHHcCCCccCeEE
Confidence 3555543 25799999999999999999995 44455444 458999988754 45689999999999999
Q ss_pred EEeCCCCeeE---------EEecC-CCChHHHHHHHHHHHhh
Q 021955 201 VIDPITGQKI---------CSWCG-MINPQPLGEMLLPFMDR 232 (305)
Q Consensus 201 IIdprTGe~~---------~~~~G-~~~~~~~l~~L~~fl~~ 232 (305)
|.. .|+.+ ..+.| ..+.++|.+.|...+..
T Consensus 83 ~~~--~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~~ 122 (149)
T 3gix_A 83 FFF--NGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRG 122 (149)
T ss_dssp EEE--TTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHHH
T ss_pred EEE--CCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHHH
Confidence 554 58888 77889 88999999888888753
No 87
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.61 E-value=7.3e-08 Score=80.12 Aligned_cols=91 Identities=16% Similarity=0.127 Sum_probs=73.8
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCC---------------------hhHHHHHHhcCC
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT---------------------SEGWKVCSFYNM 193 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds---------------------~eg~~~~~~Y~~ 193 (305)
.+|++||++.++||..|+.+. +.+.++.++++.++.++.+. .....++..|++
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~------~~l~~l~~~~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 123 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEH------QYLNQLSAQGIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGV 123 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHH------HHHHHHHHTTCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTC
T ss_pred CCCEEEEEEECCCCHHHHHHH------HHHHHHHHCCCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCc
Confidence 589999999999999999884 56777777777777776432 123357778899
Q ss_pred CCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 194 DSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 194 ~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
..+|++.|||+ .|+.+..+.|..+++.+.+.|...+++
T Consensus 124 ~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~~l~~ 161 (168)
T 2b1k_A 124 YGAPETFLIDG-NGIIRYRHAGDLNPRVWEEEIKPLWEK 161 (168)
T ss_dssp CSSSEEEEECT-TSBEEEEEESCCCHHHHHHTTHHHHHH
T ss_pred cccCEEEEECC-CCeEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999999997 699998999999999988888877764
No 88
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.61 E-value=1.6e-07 Score=75.49 Aligned_cols=87 Identities=16% Similarity=0.255 Sum_probs=69.0
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh-----ccEEEEEecCCChh-----------------------HHH
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS-----VNFIFWQEYDDTSE-----------------------GWK 186 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~-----~nFIfwq~~~ds~e-----------------------g~~ 186 (305)
.+|++||++.++||..|+.+... +.++.+ .++.|+.++.+... ...
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~------l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 105 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAE------LKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSE 105 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHH------HHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCH
T ss_pred CCcEEEEEEECCCCHHHHHHhHH------HHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchH
Confidence 68999999999999999998544 444433 34889988888654 558
Q ss_pred HHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 187 VCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 187 ~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
++..|++..+|++.|||+ .|+.+..+. +.+++.+.|.+.|.
T Consensus 106 ~~~~~~v~~~P~~~lid~-~G~i~~~~~---~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 106 TAKQYAILTLPTNILLSP-TGKILARDI---QGEALTGKLKELLK 146 (148)
T ss_dssp HHHHTTCCSSSEEEEECT-TSBEEEESC---CHHHHHHHHHHHC-
T ss_pred HHHhcCCCCcCEEEEECC-CCeEEEecC---CHHHHHHHHHHHHc
Confidence 889999999999999997 688877754 78888888877764
No 89
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.61 E-value=1.3e-07 Score=77.01 Aligned_cols=91 Identities=18% Similarity=0.230 Sum_probs=72.4
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc-cEEEEEecCCCh---------------------hHHHHHHhcC
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV-NFIFWQEYDDTS---------------------EGWKVCSFYN 192 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~-nFIfwq~~~ds~---------------------eg~~~~~~Y~ 192 (305)
.+|++||++.++||..|+.+. +.+.++.++ ++.|+.++.+.. ....+++.|+
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~------~~l~~l~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 114 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEA------PLLTELGKDKRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWG 114 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHH------HHHHHHTTCTTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTT
T ss_pred CCCEEEEEEEcccCHhHHHHH------HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcC
Confidence 489999999999999999884 556666655 377777765432 2335777899
Q ss_pred CCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 193 MDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 193 ~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
+..+|++.|||+ .|+.+..+.|..+.+++.+.|...+++
T Consensus 115 v~~~P~~~~id~-~G~i~~~~~g~~~~~~l~~~l~~~l~~ 153 (156)
T 1kng_A 115 VYGVPETFVVGR-EGTIVYKLVGPITPDNLRSVLLPQMEK 153 (156)
T ss_dssp CCSSCEEEEECT-TSBEEEEEESCCCHHHHHHTHHHHHHH
T ss_pred cCccCeEEEEcC-CCCEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 999999999997 699999999999999988888887754
No 90
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.61 E-value=1.2e-07 Score=76.30 Aligned_cols=94 Identities=10% Similarity=0.023 Sum_probs=71.9
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhH--H--------H-------------HHHhc
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG--W--------K-------------VCSFY 191 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg--~--------~-------------~~~~Y 191 (305)
.+|++||++.++||..|+.+...+ .....++-..++.|+.++.+.... . . ++..|
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l--~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 107 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKL--YDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITY 107 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHH--HHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHH--HHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhc
Confidence 589999999999999999986543 222233333458888888774322 1 1 78889
Q ss_pred CCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 192 NMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 192 ~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
++..+|++.|||+ .|+.+..+.|..+.+++++.|.+.+.
T Consensus 108 ~i~~~P~~~lid~-~G~i~~~~~g~~~~~~~l~~l~~~l~ 146 (148)
T 3hcz_A 108 DIYATPVLYVLDK-NKVIIAKRIGYENLDDFLVQYEKSLK 146 (148)
T ss_dssp CCCSSCEEEEECT-TCBEEEESCCGGGHHHHHHHHHHHHH
T ss_pred CcCCCCEEEEECC-CCcEEEecCCHHHHHHHHHHHHHHhc
Confidence 9999999999997 69999999888888888888877664
No 91
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.59 E-value=2e-07 Score=73.17 Aligned_cols=91 Identities=14% Similarity=0.172 Sum_probs=68.2
Q ss_pred HcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCC--------------------------hhHHHH
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT--------------------------SEGWKV 187 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds--------------------------~eg~~~ 187 (305)
-.+|++||++.++||..|+.+-..+ ..+.+-.+.++.+..++.+. .....+
T Consensus 20 ~~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 96 (138)
T 4evm_A 20 YKGKKVYLKFWASWCSICLASLPDT---DEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKL 96 (138)
T ss_dssp GTTSEEEEEECCTTCHHHHHHHHHH---HHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHH
T ss_pred hCCCEEEEEEEcCcCHHHHHHHHHH---HHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHH
Confidence 3689999999999999999885443 22222244577777773211 123357
Q ss_pred HHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021955 188 CSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLP 228 (305)
Q Consensus 188 ~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~ 228 (305)
++.|++..+|++.|||+ .|+.+..+.|..+++++.+.|..
T Consensus 97 ~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 97 LETYGVRSYPTQAFIDK-EGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp HHHTTCCSSSEEEEECT-TCCEEEEEESCCCHHHHHHHHHH
T ss_pred HHHcCcccCCeEEEECC-CCcEEEeecCCCcHHHHHHHHHh
Confidence 88999999999999997 69999999999998888777654
No 92
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.59 E-value=1.4e-07 Score=80.83 Aligned_cols=99 Identities=6% Similarity=0.061 Sum_probs=79.6
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc---cEEEEEecCCChhHHHHHHhcCCCCCce
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~---nFIfwq~~~ds~eg~~~~~~Y~~~~~P~ 198 (305)
..+|++++.. +.+|+++|+|..+||.+|++| +|-+.++-.+ ..+|+.+|+|. ...++..|.+.+.|+
T Consensus 29 ~~~f~~~v~~--~~~k~VVVdF~A~WCgPCk~m------~PvleelA~e~~~~v~f~kVDVDe--~~e~a~~y~V~siPT 98 (160)
T 2av4_A 29 GWAVDQAIVN--EDERLVCIRFGHDYDPDCMKM------DELLYKVADDIKNFCVIYLVDITE--VPDFNTMYELYDPVS 98 (160)
T ss_dssp HHHHHHHHHH--CSSSEEEEEEECTTSHHHHHH------HHHHHHHHHHHTTTEEEEEEETTT--CCTTTTTTTCCSSEE
T ss_pred HHHHHHHHHh--cCCCEEEEEEECCCChhHHHH------HHHHHHHHHHccCCcEEEEEECCC--CHHHHHHcCCCCCCE
Confidence 3457777632 578999999999999999999 5666666654 47899998874 456999999999999
Q ss_pred EEEEeCCCCeeE--E-------EecCCCC-hHHHHHHHHHHHhh
Q 021955 199 VLVIDPITGQKI--C-------SWCGMIN-PQPLGEMLLPFMDR 232 (305)
Q Consensus 199 i~IIdprTGe~~--~-------~~~G~~~-~~~~l~~L~~fl~~ 232 (305)
+++.- .|+.+ . .+.|..+ .++|++.|..++..
T Consensus 99 ~~fFk--~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~ 140 (160)
T 2av4_A 99 VMFFY--RNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRG 140 (160)
T ss_dssp EEEEE--TTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHH
T ss_pred EEEEE--CCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHH
Confidence 98886 48877 3 6789876 88999999888864
No 93
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.58 E-value=1.7e-07 Score=76.13 Aligned_cols=89 Identities=8% Similarity=-0.124 Sum_probs=71.4
Q ss_pred eEEEEeecCCCccchhhhhccCCCHHHHHHhhcc-EEEEEecCCC-------hhHHHHHHhcCCCCCceEEEEeCCCCee
Q 021955 138 WLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN-FIFWQEYDDT-------SEGWKVCSFYNMDSIPAVLVIDPITGQK 209 (305)
Q Consensus 138 wLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~n-FIfwq~~~ds-------~eg~~~~~~Y~~~~~P~i~IIdprTGe~ 209 (305)
++||+++++||.+|+.+ .+.+.++.++. +.|..++.+. .+...+++.|++..+|+++|++ .|+.
T Consensus 33 ~vlv~F~a~wC~~C~~~------~p~l~~l~~~~~v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~~~~--~G~~ 104 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRD------WPQLIQASKEVDVPIVMFIWGSLIGERELSAARLEMNKAGVEGTPTLVFYK--EGRI 104 (135)
T ss_dssp SEEEEEEETTCHHHHHH------HHHHHHHHTTCCSCEEEEEECTTCCHHHHHHHHHHHHHHTCCSSSEEEEEE--TTEE
T ss_pred cEEEEEECCcCHhhhHh------ChhHHHHHHHCCCEEEEEECCCchhhhhhhhhHHHHHHcCCceeCeEEEEc--CCEE
Confidence 99999999999999999 46677777653 6677777644 5677899999999999999998 6999
Q ss_pred EEEecCCCChHHHHHHHHHHHhhCC
Q 021955 210 ICSWCGMINPQPLGEMLLPFMDRSP 234 (305)
Q Consensus 210 ~~~~~G~~~~~~~l~~L~~fl~~~~ 234 (305)
+..+.|..+.+.+.+.+...++...
T Consensus 105 v~~~~G~~~~~~~~~~i~~~~~~~~ 129 (135)
T 3emx_A 105 VDKLVGATPWSLKVEKAREIYGGEG 129 (135)
T ss_dssp EEEEESCCCHHHHHHHHHHHC----
T ss_pred EEEEeCCCCHHHHHHHHHHHhCCCc
Confidence 9999999998888777777776543
No 94
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.58 E-value=3.4e-07 Score=72.33 Aligned_cols=97 Identities=12% Similarity=0.095 Sum_probs=72.4
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCCCce
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~~P~ 198 (305)
-..+|.+.+.. ..+|+++|+++++||.+|+.+.. .+.++.++ ++.|..++.+. +...+++.|++..+|+
T Consensus 24 ~~~~~~~~~~~--~~~~~~vv~f~a~wC~~C~~~~~------~l~~~~~~~~~~~~~~vd~~~-~~~~~~~~~~v~~~Pt 94 (124)
T 1faa_A 24 NKDTFWPIVKA--AGDKPVVLDMFTQWCGPCKAMAP------KYEKLAEEYLDVIFLKLDCNQ-ENKTLAKELGIRVVPT 94 (124)
T ss_dssp CTTTHHHHHHH--TTTSCEEEEEECTTCHHHHHHHH------HHHHHHHHCTTSEEEEEECSS-TTHHHHHHHCCSSSSE
T ss_pred cchhHHHHHHh--cCCCEEEEEEECCcCHhHHHHhH------HHHHHHHHCCCCEEEEEecCc-chHHHHHHcCCCeeeE
Confidence 35567776653 47899999999999999999964 34444443 47888887763 3467889999999999
Q ss_pred EEEEeCCCCeeEEEecCCCChHHHHHHHHHH
Q 021955 199 VLVIDPITGQKICSWCGMINPQPLGEMLLPF 229 (305)
Q Consensus 199 i~IIdprTGe~~~~~~G~~~~~~~l~~L~~f 229 (305)
++|.. .|+.+..+.|.. ++++.+.|.+.
T Consensus 95 ~~~~~--~G~~~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 95 FKILK--ENSVVGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp EEEEE--TTEEEEEEESSC-HHHHHHHHHHH
T ss_pred EEEEe--CCcEEEEEcCCC-HHHHHHHHHHh
Confidence 76653 699988889975 77766666554
No 95
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.57 E-value=4.7e-07 Score=71.17 Aligned_cols=87 Identities=13% Similarity=0.153 Sum_probs=65.2
Q ss_pred HHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh---ccEEEEEecCCC--hhHHHHHHhcCCCCCceEEEEeCCC
Q 021955 132 ALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS---VNFIFWQEYDDT--SEGWKVCSFYNMDSIPAVLVIDPIT 206 (305)
Q Consensus 132 Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~---~nFIfwq~~~ds--~eg~~~~~~Y~~~~~P~i~IIdprT 206 (305)
+.+.+|.+||++.++||.+|+.+. +.+.++.+ ..+++..++... .+...+++.|++..+|+++++. .
T Consensus 25 ~~~~~~~~~v~f~a~wC~~C~~~~------p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~~~--~ 96 (118)
T 1zma_A 25 ALDKKETATFFIGRKTCPYCRKFA------GTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHIT--D 96 (118)
T ss_dssp HHHTTCCEEEEEECTTCHHHHHHH------HHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSSCEEEEEE--T
T ss_pred HHhCCCeEEEEEECCCCccHHHHH------HHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCCCeEEEEE--C
Confidence 345689999999999999999995 44555544 345555443222 3456789999999999999996 5
Q ss_pred CeeEEEecCCCChHHHHHHH
Q 021955 207 GQKICSWCGMINPQPLGEML 226 (305)
Q Consensus 207 Ge~~~~~~G~~~~~~~l~~L 226 (305)
|+.+..+.|..+++++.+.|
T Consensus 97 G~~~~~~~G~~~~~~l~~~l 116 (118)
T 1zma_A 97 GQINVRCDSSMSAQEIKDFA 116 (118)
T ss_dssp TEEEEECCTTCCHHHHHHHH
T ss_pred CEEEEEecCCCCHHHHHHHh
Confidence 99888899998888766544
No 96
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.56 E-value=4.3e-07 Score=74.61 Aligned_cols=97 Identities=15% Similarity=0.076 Sum_probs=71.8
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCCh--hHHHHHHhc---------------------
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTS--EGWKVCSFY--------------------- 191 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~--eg~~~~~~Y--------------------- 191 (305)
.+|++||++.++||..|+.+...+ .....++=..++.|+.++.+.. ...+++..+
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l--~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDM--VQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYI 110 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHH--HHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTS
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHH--HHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhh
Confidence 589999999999999999986544 2222233333588888877653 333443333
Q ss_pred --CCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021955 192 --NMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (305)
Q Consensus 192 --~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~~ 234 (305)
++..+|++.|||+ .|+.+..+.|..+++++.+.|...|.+..
T Consensus 111 ~~~i~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~~l~~~~ 154 (165)
T 3or5_A 111 DGGITGIPTSFVIDA-SGNVSGVIVGPRSKADFDRIVKMALGAKA 154 (165)
T ss_dssp TTCSCSSSEEEEECT-TSBEEEEECSCCCHHHHHHHHHHHHC---
T ss_pred ccCCCCCCeEEEECC-CCcEEEEEcCCCCHHHHHHHHHHHHhhhc
Confidence 6889999999997 69999999999999999999999987654
No 97
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.56 E-value=2.7e-07 Score=75.02 Aligned_cols=98 Identities=13% Similarity=0.063 Sum_probs=73.3
Q ss_pred HcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCC--Ch-------------------hHHHHHHhcC
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDD--TS-------------------EGWKVCSFYN 192 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~d--s~-------------------eg~~~~~~Y~ 192 (305)
-.+|++||++.++||..|+.+...+ .....++-..++.++.++.+ +. ....+++.|+
T Consensus 26 ~~gk~~lv~f~~~~C~~C~~~~~~l--~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 103 (153)
T 2l5o_A 26 LQGKVTLINFWFPSCPGCVSEMPKI--IKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFG 103 (153)
T ss_dssp HTTCEEEEEEECTTCTTHHHHHHHH--HHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHT
T ss_pred hCCCEEEEEEECCCCccHHHHHHHH--HHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcC
Confidence 4689999999999999999885443 12222222235777666532 21 2346788899
Q ss_pred CCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021955 193 MDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (305)
Q Consensus 193 ~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~~ 234 (305)
+..+|++.|||+ .|+.+..+.|..+++++.+.|...|....
T Consensus 104 i~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~ll~~~~ 144 (153)
T 2l5o_A 104 TQVYPTSVLIGK-KGEILKTYVGEPDFGKLYQEIDTAWRNSD 144 (153)
T ss_dssp CCSSSEEEEECS-SSCCCEEEESSCCHHHHHHHHHHHHHCCS
T ss_pred CCccCeEEEECC-CCcEEEEEcCCCCHHHHHHHHHHHHHhhh
Confidence 999999999997 69988889999999999999999988543
No 98
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.56 E-value=2.4e-07 Score=71.80 Aligned_cols=97 Identities=14% Similarity=0.087 Sum_probs=71.3
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCCCceE
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPAV 199 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i 199 (305)
..+|++++.. ..+|++||+++++||..|+.+... +.++.++ ++.|..++.+. +...+++.|++..+|++
T Consensus 12 ~~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~~~------l~~~~~~~~~v~~~~vd~~~-~~~~~~~~~~v~~~Pt~ 82 (111)
T 2pu9_C 12 KDTFWPIVKA--AGDKPVVLDMFTQWCGPSKAMAPK------YEKLAEEYLDVIFLKLDCNQ-ENKTLAKELGIRVVPTF 82 (111)
T ss_dssp TTTHHHHHTT--CTTSCEEEEEECTTCHHHHHHHHH------HHHHHHHCTTSEEEEEECSS-TTHHHHHHHCCSBSSEE
T ss_pred hHHHHHHHHh--cCCCEEEEEEECCcCHhHHHHCHH------HHHHHHHCCCeEEEEEecCc-chHHHHHHcCCCeeeEE
Confidence 4567776642 258999999999999999999643 4444443 48888887763 34578899999999995
Q ss_pred EEEeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021955 200 LVIDPITGQKICSWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 200 ~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl 230 (305)
+ +++ .|+.+..+.|.. ++++.+.|..++
T Consensus 83 ~-~~~-~G~~~~~~~G~~-~~~l~~~l~~~~ 110 (111)
T 2pu9_C 83 K-ILK-ENSVVGEVTGAK-YDKLLEAIQAAR 110 (111)
T ss_dssp E-EES-SSSEEEEEESSC-HHHHHHHHHHHH
T ss_pred E-EEe-CCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 4 553 699888889974 777776666554
No 99
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.55 E-value=4.1e-07 Score=76.87 Aligned_cols=95 Identities=9% Similarity=0.083 Sum_probs=70.6
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccE------EEEEecCCC--h-hHHHHHHhc--------------
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNF------IFWQEYDDT--S-EGWKVCSFY-------------- 191 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nF------Ifwq~~~ds--~-eg~~~~~~Y-------------- 191 (305)
++||+||++..+||..|+.+...+ .+...+|-+.++ .|+.++.+. + ...++++.|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l--~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 135 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDL--QIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMT 135 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHH--HHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHH--HHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchH
Confidence 589999999999999999886544 222333333336 888887776 2 334554433
Q ss_pred -------CCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 192 -------NMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 192 -------~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
++..+|++.|||+ .|+.+..+.|..+++++.+.|...+.+
T Consensus 136 ~~~~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~ll~~ 182 (183)
T 3lwa_A 136 AASLGGVPASVIPTTIVLDK-QHRPAAVFLREVTSKDVLDVALPLVDE 182 (183)
T ss_dssp GGGTTTCCTTCCSEEEEECT-TSCEEEEECSCCCHHHHHHHHHHHHHC
T ss_pred HHHhccCCCCCCCeEEEECC-CCcEEEEEcCCCCHHHHHHHHHHHHhc
Confidence 4678999999997 699999999999999999999888764
No 100
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.51 E-value=8.3e-08 Score=77.10 Aligned_cols=97 Identities=18% Similarity=0.198 Sum_probs=69.6
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCc--------------cchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHH
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEF--------------SSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKV 187 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f--------------~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~ 187 (305)
..+|++.. .+.+|.+||+++++||. +|+.+...+ +.+.+-+..++.|..++.+.. ..+
T Consensus 10 ~~~f~~~~---~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~---~~l~~~~~~~~~~~~vd~d~~--~~l 81 (123)
T 1oaz_A 10 DDSFDTDV---LKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPIL---DEIADEYQGKLTVAKLNIDQN--PGT 81 (123)
T ss_dssp STTHHHHT---TSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHH---TTC-------CEEEEEETTSC--TTT
T ss_pred hhhHHHHH---HhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHH---HHHHHHhcCCeEEEEEECCCC--HHH
Confidence 34565443 46799999999999999 777775432 123333445788998887753 468
Q ss_pred HHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021955 188 CSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLP 228 (305)
Q Consensus 188 ~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~ 228 (305)
++.|++..+|+++++ ..|+.+..+.|..+++++.+.|.+
T Consensus 82 ~~~~~v~~~Pt~~~~--~~G~~~~~~~G~~~~~~l~~~l~~ 120 (123)
T 1oaz_A 82 APKYGIRGIPTLLLF--KNGEVAATKVGALSKGQLKEFLDA 120 (123)
T ss_dssp GGGGTCCBSSEEEEE--ESSSEEEEEESCCCHHHHHHHHTT
T ss_pred HHHcCCCccCEEEEE--ECCEEEEEEeCCCCHHHHHHHHHH
Confidence 899999999999999 379999899999888877666543
No 101
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.92 E-value=1.2e-08 Score=77.47 Aligned_cols=92 Identities=21% Similarity=0.180 Sum_probs=71.1
Q ss_pred HHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeE
Q 021955 131 AALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKI 210 (305)
Q Consensus 131 ~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~ 210 (305)
...+.+|+++|+++++||..|+.+.+.+ ..+.+.+..++.|..++.+ +...+++.|++..+|++.++ +.|+.+
T Consensus 14 ~~~~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~--~~g~~~ 86 (106)
T 2yj7_A 14 EVLKSDKPVLVDFWAPWCGPCRMIAPII---EELAKEYEGKVKVVKVNVD--ENPNTAAQYGIRSIPTLLLF--KNGQVV 86 (106)
Confidence 3456789999999999999999996544 3444445556778777655 45578899999999999999 368888
Q ss_pred EEecCCCChHHHHHHHHHH
Q 021955 211 CSWCGMINPQPLGEMLLPF 229 (305)
Q Consensus 211 ~~~~G~~~~~~~l~~L~~f 229 (305)
..+.|..+.+++.+.|.+.
T Consensus 87 ~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 87 DRLVGAQPKEALKERIDKH 105 (106)
Confidence 8889988888777666543
No 102
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.51 E-value=5.8e-07 Score=74.15 Aligned_cols=91 Identities=5% Similarity=0.063 Sum_probs=71.2
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEE---
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKIC--- 211 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~--- 211 (305)
.+|++||+++.+||.+|+.+...+ +.+.+-...++.|..++.+.. ..+++.|++..+|++.++. .|+.+.
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l---~~l~~~~~~~v~~~~vd~d~~--~~~~~~~~i~~~Pt~~~~~--~G~~v~~~~ 94 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVL---YSIAEKVKNFAVIYLVDITEV--PDFNKMYELYDPCTVMFFF--RNKHIMIDL 94 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHH---HHHHHHHTTTEEEEEEETTTC--CTTTTSSCSCSSCEEEEEE--TTEEEEEEC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhCCCeEEEEEccccC--HHHHHHcCCCCCCEEEEEE--CCcEEEEec
Confidence 589999999999999999996543 234444445799999988743 4588999999999999996 588776
Q ss_pred ------EecCCCC-hHHHHHHHHHHHhh
Q 021955 212 ------SWCGMIN-PQPLGEMLLPFMDR 232 (305)
Q Consensus 212 ------~~~G~~~-~~~~l~~L~~fl~~ 232 (305)
.+.|.++ .++|++.|...+..
T Consensus 95 g~~~~~~~~g~~~~~~~l~~~i~~~~~~ 122 (142)
T 1qgv_A 95 GTGNNNKINWAMEDKQEMVDIIETVYRG 122 (142)
T ss_dssp C------CCSCCSCHHHHHHHHHHHHHH
T ss_pred CCCCcceeeeecCcHHHHHHHHHHHHHH
Confidence 3556664 89999999888874
No 103
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.50 E-value=4.7e-07 Score=74.14 Aligned_cols=93 Identities=15% Similarity=0.168 Sum_probs=71.1
Q ss_pred HHcCCeEEEEeecCCCccchhh-hhccCCCHHHHHHhh----ccEEEEEecCC-------Ch------------------
Q 021955 133 LAQDKWLLVNLQSTKEFSSLML-NRDTWGNEAVSQIIS----VNFIFWQEYDD-------TS------------------ 182 (305)
Q Consensus 133 k~~~KwLLVniq~~~~f~c~~l-nRDvw~n~~V~~~i~----~nFIfwq~~~d-------s~------------------ 182 (305)
.-.+|++||++..+||.+|... - +.+.++.+ .++.|+.++.+ +.
T Consensus 25 ~~~gk~vlv~f~a~wC~~C~~~~~------~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (158)
T 3eyt_A 25 DLRGKVIVIEAFQMLCPGCVMHGI------PLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGV 98 (158)
T ss_dssp GGTTSEEEEEEECTTCHHHHHTHH------HHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEE
T ss_pred HhCCCEEEEEEECCcCcchhhhhh------HHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEE
Confidence 3358999999999999999984 3 23333332 35777777643 11
Q ss_pred --hHH----HHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 183 --EGW----KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 183 --eg~----~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
++. .+++.|++..+|++.|||+ .|+.+..+.|..+.+++.+.|...|.+
T Consensus 99 d~~~~~~~~~~~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 99 DQPGDGAMPRTMAAYQMRGTPSLLLIDK-AGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp ECCCSSSSCHHHHHTTCCSSSEEEEECT-TSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred cCccchhhHHHHHHcCCCCCCEEEEECC-CCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 111 5788999999999999997 699999999999999999999988864
No 104
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.49 E-value=9.9e-07 Score=72.10 Aligned_cols=93 Identities=15% Similarity=0.195 Sum_probs=69.5
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChh-----------------------HHHHHHhc
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE-----------------------GWKVCSFY 191 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~e-----------------------g~~~~~~Y 191 (305)
.+||+||++.++||..|+.+...+ .....+|-..++.++.++.+... ...+++.|
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l--~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 105 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYL--LKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESY 105 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHH--HHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHH--HHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHh
Confidence 589999999999999999885443 22222233345888888877532 46788899
Q ss_pred CCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021955 192 NMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (305)
Q Consensus 192 ~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~ 233 (305)
++..+|++.|||+ .|+.+..+ ++++++.+.|...+...
T Consensus 106 ~v~~~P~~~lid~-~G~i~~~~---~~~~~l~~~l~~l~~~~ 143 (152)
T 2lrn_A 106 CIVGFPHIILVDP-EGKIVAKE---LRGDDLYNTVEKFVNGA 143 (152)
T ss_dssp TCCSSCEEEEECT-TSEEEEEC---CCTTHHHHHHHHHHTSS
T ss_pred CCCcCCeEEEECC-CCeEEEee---CCHHHHHHHHHHHHhhc
Confidence 9999999999997 69988775 35677777777777643
No 105
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.49 E-value=9.4e-07 Score=71.69 Aligned_cols=99 Identities=11% Similarity=0.114 Sum_probs=71.1
Q ss_pred HHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChh--H------------------HHHHHhc
Q 021955 132 ALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE--G------------------WKVCSFY 191 (305)
Q Consensus 132 Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~e--g------------------~~~~~~Y 191 (305)
+.-.+|++||++.++||..|+.+-..+ .....++-..++.++.++.+... . ..+++.|
T Consensus 24 ~~~~gk~vll~f~~~~C~~C~~~~~~l--~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 101 (152)
T 3gl3_A 24 SDKTGSVVYLDFWASWCGPCRQSFPWM--NQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLY 101 (152)
T ss_dssp GGGTTSEEEEEEECTTCTHHHHHHHHH--HHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHT
T ss_pred HHhCCCEEEEEEECCcCHHHHHHHHHH--HHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHc
Confidence 344689999999999999999986654 23333343445777777777432 1 1567789
Q ss_pred CCCCCceEEEEeCCCCeeEEEecCCCC--hHHHHHHHHHHHhhC
Q 021955 192 NMDSIPAVLVIDPITGQKICSWCGMIN--PQPLGEMLLPFMDRS 233 (305)
Q Consensus 192 ~~~~~P~i~IIdprTGe~~~~~~G~~~--~~~~l~~L~~fl~~~ 233 (305)
++..+|++.|||+ .|+.+..+.|... .+++.+.|.+.+...
T Consensus 102 ~v~~~P~~~lid~-~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 102 GVKGMPTSFLIDR-NGKVLLQHVGFRPADKEALEQQILAALGGN 144 (152)
T ss_dssp TCCSSSEEEEECT-TSBEEEEEESCCTTTHHHHHHHHHHHTC--
T ss_pred CCCCCCeEEEECC-CCCEEEEEccCCCcCHHHHHHHHHHHHccc
Confidence 9999999999997 6999999999754 467777776665543
No 106
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.47 E-value=2.2e-07 Score=75.72 Aligned_cols=98 Identities=17% Similarity=0.255 Sum_probs=69.6
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCCCceE
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPAV 199 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i 199 (305)
...|.+++..+ ..+|++||+++.+||.+|+.|. +.+.++.++ ++.|..++.+... ..|++..+|++
T Consensus 17 ~~~~~~~v~~~-~~~~~vvv~f~a~wC~~C~~~~------p~l~~la~~~~~v~~~~vd~~~~~-----~~~~i~~~Pt~ 84 (135)
T 2dbc_A 17 GNQYVNEVTNA-EKDLWVVIHLYRSSVPMCLVVN------QHLSVLARKFPETKFVKAIVNSCI-----EHYHDNCLPTI 84 (135)
T ss_dssp HHHHHHHTTTC-CSSCEEEEEECCTTCHHHHHHH------HHHHHHHHHCSSEEEEEECCSSSC-----SSCCSSCCSEE
T ss_pred HHHHHHHHHhc-CCCCEEEEEEECCCChHHHHHH------HHHHHHHHHCCCcEEEEEEhhcCc-----ccCCCCCCCEE
Confidence 34466655444 3468999999999999999995 455555554 4788888877643 68999999999
Q ss_pred EEEeCCCCeeEEEecCCCChH---HHHHHHHHHHhhC
Q 021955 200 LVIDPITGQKICSWCGMINPQ---PLGEMLLPFMDRS 233 (305)
Q Consensus 200 ~IIdprTGe~~~~~~G~~~~~---~~l~~L~~fl~~~ 233 (305)
+++. .|+.+..+.|..+.. --.+.|..+|.++
T Consensus 85 ~~~~--~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 85 FVYK--NGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp EEES--SSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred EEEE--CCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 9996 699888888875211 0134455566544
No 107
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.46 E-value=2.4e-07 Score=76.23 Aligned_cols=95 Identities=15% Similarity=0.045 Sum_probs=66.7
Q ss_pred HcCCeEEEEeecCCCccchhhhhcc-------------------------CCCHHHHHHhhc-cEEEEEecCCChhHHHH
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDT-------------------------WGNEAVSQIISV-NFIFWQEYDDTSEGWKV 187 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDv-------------------------w~n~~V~~~i~~-nFIfwq~~~ds~eg~~~ 187 (305)
..+|++||++.++||..|+.+...+ -..+.+++++++ ++-+|.+..+ +...+
T Consensus 36 ~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~~~~ 113 (164)
T 2h30_A 36 KKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTD--NGGTI 113 (164)
T ss_dssp CTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEEC--TTCHH
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEc--CchHH
Confidence 4589999999999999999874221 012234444443 2322333222 23468
Q ss_pred HHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 188 CSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 188 ~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
++.|++..+|++.|||+ .|+.+..+.|..+.+++.+.|...+.
T Consensus 114 ~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 114 AQNLNISVYPSWALIGK-DGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp HHHTTCCSSSEEEEECT-TSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred HHHcCCCccceEEEECC-CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 88999999999999997 69999999999998887777766554
No 108
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.45 E-value=5.9e-07 Score=73.07 Aligned_cols=98 Identities=14% Similarity=0.113 Sum_probs=69.7
Q ss_pred HcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCCh--hH-------------------HHHHHhcC
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTS--EG-------------------WKVCSFYN 192 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~--eg-------------------~~~~~~Y~ 192 (305)
-.+|++||++.++||..|+.+-..+ .....++-..++.|+.++.+.. +. ..++..|+
T Consensus 26 ~~gk~vll~f~~~~C~~C~~~~~~l--~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 103 (154)
T 3kcm_A 26 LKGQVVIVNFWATWCPPCREEIPSM--MRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYG 103 (154)
T ss_dssp GTTSEEEEEEECTTCHHHHHHHHHH--HHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHT
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHH--HHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhC
Confidence 3689999999999999999986554 2222222233677777777763 21 23778899
Q ss_pred CCCCceEEEEeCCCCeeEEEecCCC--ChHHHHHHHHHHHhhCC
Q 021955 193 MDSIPAVLVIDPITGQKICSWCGMI--NPQPLGEMLLPFMDRSP 234 (305)
Q Consensus 193 ~~~~P~i~IIdprTGe~~~~~~G~~--~~~~~l~~L~~fl~~~~ 234 (305)
+..+|++.|||+ .|+.+..+.|.. +.+++.+.|.......+
T Consensus 104 v~~~P~~~lid~-~G~i~~~~~g~~~~~~~~l~~~l~~l~~~~~ 146 (154)
T 3kcm_A 104 TTGVPETFVIDR-HGVILKKVVGAMEWDHPEVIAFLNNELSKAR 146 (154)
T ss_dssp CCSBCEEEEECT-TSBEEEEEESCCCTTSHHHHHHHHTC-----
T ss_pred CCCCCeEEEECC-CCcEEEEEcCCCccccHHHHHHHHHHHHHhh
Confidence 999999999997 799999999975 66677777777665544
No 109
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.45 E-value=6.6e-07 Score=79.61 Aligned_cols=117 Identities=15% Similarity=0.193 Sum_probs=86.3
Q ss_pred hhhhCCCccc--cccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc---cEEEEEecCCChhH
Q 021955 110 ASLYRPPFHV--MFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEG 184 (305)
Q Consensus 110 a~lFrPP~~l--~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~---nFIfwq~~~ds~eg 184 (305)
+.||.+...+ +-..+|++.+ ...+|.+||+++++||.+|+.+...+ ..+.+-+.. ++.|..++.+..+.
T Consensus 5 ~~l~~~~~~v~~l~~~~f~~~i---~~~~~~vlv~F~a~wC~~C~~~~p~~---~~l~~~~~~~~~~v~~~~vd~~~~~~ 78 (244)
T 3q6o_A 5 SALYSPSDPLTLLQADTVRGAV---LGSRSAWAVEFFASWCGHCIAFAPTW---XALAEDVKAWRPALYLAALDCAEETN 78 (244)
T ss_dssp -CCSCTTSSSEEECTTTHHHHH---SSCSSEEEEEEECTTCHHHHHHHHHH---HHHHHHTGGGTTTEEEEEEETTSTTT
T ss_pred cCCCCCCCCceeCChhhHHHHH---hhCCCeEEEEEECCcCHHHHHHHHHH---HHHHHHHHhccCcEEEEEEeCCchhh
Confidence 3456544333 3355676655 45679999999999999999995432 334444444 79999999988888
Q ss_pred HHHHHhcCCCCCceEEEEeCC--C--CeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021955 185 WKVCSFYNMDSIPAVLVIDPI--T--GQKICSWCGMINPQPLGEMLLPFMDRSP 234 (305)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdpr--T--Ge~~~~~~G~~~~~~~l~~L~~fl~~~~ 234 (305)
..+++.|++..+|++.++++- . |..+ .+.| .+++.+.+.|.+++....
T Consensus 79 ~~l~~~~~v~~~Pt~~~~~~g~~~~~g~~~-~~~g-~~~~~l~~~i~~~l~~~~ 130 (244)
T 3q6o_A 79 SAVCRDFNIPGFPTVRFFXAFTXNGSGAVF-PVAG-ADVQTLRERLIDALESHH 130 (244)
T ss_dssp HHHHHHTTCCSSSEEEEECTTCCSSSCEEC-CCTT-CCHHHHHHHHHHHHHTCT
T ss_pred HHHHHHcCCCccCEEEEEeCCCcCCCCeeE-ecCC-CCHHHHHHHHHHHHHhcc
Confidence 999999999999999999962 1 2333 4566 589999999999998765
No 110
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.44 E-value=1.4e-06 Score=71.62 Aligned_cols=95 Identities=16% Similarity=0.099 Sum_probs=71.3
Q ss_pred cCCeEEEEeecCCCcc-chhhhhccCCCHHHHHHhh-----ccEEEEEecCCC--------------------------h
Q 021955 135 QDKWLLVNLQSTKEFS-SLMLNRDTWGNEAVSQIIS-----VNFIFWQEYDDT--------------------------S 182 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~-c~~lnRDvw~n~~V~~~i~-----~nFIfwq~~~ds--------------------------~ 182 (305)
.+||+||++..+||.+ |...-..+ ..+.+-++ .++.++.++.|. .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l---~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d 98 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKM---IQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTRE 98 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHH---HHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHH---HHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHH
Confidence 5899999999999998 98764332 12222233 266666666553 1
Q ss_pred hHHHHHHhcCCCCCc---------------eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021955 183 EGWKVCSFYNMDSIP---------------AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (305)
Q Consensus 183 eg~~~~~~Y~~~~~P---------------~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~ 233 (305)
....+++.|++...| ++.|||+ .|+.+..+.|..+++++.+.|...+..+
T Consensus 99 ~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~ll~~~ 163 (164)
T 2ggt_A 99 EVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGP-DGEFLDYFGQNKRKGEIAASIATHMRPY 163 (164)
T ss_dssp HHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECT-TSCEEEEEETTCCHHHHHHHHHHHHGGG
T ss_pred HHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECC-CCeEEEEeCCCCCHHHHHHHHHHHHHhc
Confidence 223577888888888 8999997 6999999999999999999999988764
No 111
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.44 E-value=5.6e-07 Score=73.34 Aligned_cols=90 Identities=14% Similarity=0.122 Sum_probs=68.8
Q ss_pred CeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecC---CC----------------------hhHHHHHHhc
Q 021955 137 KWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYD---DT----------------------SEGWKVCSFY 191 (305)
Q Consensus 137 KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~---ds----------------------~eg~~~~~~Y 191 (305)
|++||++.++||..|+.+...+ .....++ ++.|+.++. ++ .....++..|
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l--~~l~~~~---~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 105 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGL--HRVAEET---GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARF 105 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHH--HHHHHHH---CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTS
T ss_pred CeEEEEEEcccChhHHHHHHHH--HHHHHHc---CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHh
Confidence 9999999999999999986544 2223333 555555555 22 2456788899
Q ss_pred CCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 192 NMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 192 ~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
++..+|++.|||+ .|+.+..+.|..+++++.+.|.+.+..
T Consensus 106 ~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~~~~~ 145 (154)
T 3ia1_A 106 KVLGQPWTFVVDR-EGKVVALFAGRAGREALLDALLLAGAD 145 (154)
T ss_dssp SBCSSCEEEEECT-TSEEEEEEESBCCHHHHHHHHHHTTCC
T ss_pred CCCcccEEEEECC-CCCEEEEEcCCCCHHHHHHHHHhccCc
Confidence 9999999999997 699999999999998877777766554
No 112
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.42 E-value=3.7e-06 Score=70.19 Aligned_cols=112 Identities=6% Similarity=0.070 Sum_probs=85.2
Q ss_pred HHHHhhhhCCCccccccccHHHHHHHHHHcCCeEEEEeecCCC--ccchhhhhccCCCHHHHHHhhc---cEEEEEecCC
Q 021955 106 HDILASLYRPPFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKE--FSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDD 180 (305)
Q Consensus 106 ~~~la~lFrPP~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~--f~c~~lnRDvw~n~~V~~~i~~---nFIfwq~~~d 180 (305)
.++|...++-| .+-..+|++.+. +.++.+||+|..+|| .+|+++ .+-+-++.++ .+.|+.+|+
T Consensus 8 ~~rl~~~~g~~--~vt~~~F~~~v~---~~~~~vlVdF~A~wCr~gpCk~i------aPvleela~e~~~~v~~~KVdv- 75 (137)
T 2qsi_A 8 ARAAARPNAPT--LVDEATVDDFIA---HSGKIVVLFFRGDAVRFPEAADL------AVVLPELINAFPGRLVAAEVAA- 75 (137)
T ss_dssp ---------CE--EECTTTHHHHHH---TSSSEEEEEECCCTTTCTTHHHH------HHHHHHHHHTSTTTEEEEEECG-
T ss_pred HHHHHHhcCCc--ccCHhHHHHHHh---cCCCcEEEEEeCCccCCCchhhH------HhHHHHHHHHccCCcEEEEEEC-
Confidence 44555555433 345678988773 445699999999999 999999 5767676665 588988865
Q ss_pred ChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 181 TSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 181 s~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
.+...++..|++.+.|++++.- .|+.+.+..|..+.+++.+.|...++.
T Consensus 76 -De~~~la~~ygV~siPTlilFk--dG~~v~~~vG~~~k~~l~~~l~~~l~~ 124 (137)
T 2qsi_A 76 -EAERGLMARFGVAVCPSLAVVQ--PERTLGVIAKIQDWSSYLAQIGAMLAE 124 (137)
T ss_dssp -GGHHHHHHHHTCCSSSEEEEEE--CCEEEEEEESCCCHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHcCCccCCEEEEEE--CCEEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 5678899999999999999996 699999999999999999999888853
No 113
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.42 E-value=5.8e-07 Score=72.74 Aligned_cols=91 Identities=8% Similarity=0.046 Sum_probs=69.2
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh-ccEEEEEecCCChhHHHHHHhcCCC------
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS-VNFIFWQEYDDTSEGWKVCSFYNMD------ 194 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~-~nFIfwq~~~ds~eg~~~~~~Y~~~------ 194 (305)
..+|++++ ++..+|++||+++++||.+|+.+...+ ..+.+-.+ .++.|..++.+. ...+++.|++.
T Consensus 14 ~~~f~~~~--~~~~~~~vlv~f~a~wC~~C~~~~p~~---~~l~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~~~~~~ 86 (137)
T 2dj0_A 14 DKTIDEEL--ERDKRVTWIVEFFANWSNDCQSFAPIY---ADLSLKYNCTGLNFGKVDVGR--YTDVSTRYKVSTSPLTK 86 (137)
T ss_dssp TTHHHHHH--HHSTTSCEEEEECCTTCSTTTTTHHHH---HHHHHHHCSSSCEEEECCTTT--CHHHHHHTTCCCCSSSS
T ss_pred HhhHHHHH--hcCCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhCCCCeEEEEEeCcc--CHHHHHHccCcccCCcC
Confidence 45688877 455678999999999999999996543 23333344 379999887764 45688999998
Q ss_pred CCceEEEEeCCCCeeEEEecCCCChHH
Q 021955 195 SIPAVLVIDPITGQKICSWCGMINPQP 221 (305)
Q Consensus 195 ~~P~i~IIdprTGe~~~~~~G~~~~~~ 221 (305)
.+|++.++. .|+.+..+.|..+.++
T Consensus 87 ~~Pt~~~~~--~G~~~~~~~G~~~~~~ 111 (137)
T 2dj0_A 87 QLPTLILFQ--GGKEAMRRPQIDKKGR 111 (137)
T ss_dssp CSSEEEEES--SSSEEEEESCBCSSSC
T ss_pred CCCEEEEEE--CCEEEEEecCcCchHH
Confidence 999999994 6998888888765543
No 114
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.41 E-value=1.8e-06 Score=72.39 Aligned_cols=109 Identities=10% Similarity=0.008 Sum_probs=87.4
Q ss_pred HHHHhhhhCCCccccccccHHHHHHHHHHcCCeEEEEeecCC--CccchhhhhccCCCHHHHHHhhc---c-EEEEEecC
Q 021955 106 HDILASLYRPPFHVMFNGSFEKAKDAALAQDKWLLVNLQSTK--EFSSLMLNRDTWGNEAVSQIISV---N-FIFWQEYD 179 (305)
Q Consensus 106 ~~~la~lFrPP~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~--~f~c~~lnRDvw~n~~V~~~i~~---n-FIfwq~~~ 179 (305)
.++|... -+..+-..+|++.+ ..++.+||++..+| |.+|++| .+-+.++.++ . +.|+.+|+
T Consensus 11 ~~rl~~~---g~~~~t~~~F~~~v----~~~~~vlVdF~a~~crCgpCk~i------aPvleela~e~~g~~v~~~KVdv 77 (140)
T 2qgv_A 11 WQRMLAR---GWTPVSESRLDDWL----TQAPDGVVLLSSDPKRTPEVSDN------PVMIGELLHEFPDYTWQVAIADL 77 (140)
T ss_dssp HHHHHHT---TCEECCHHHHHHHH----HTCSSEEEEECCCTTTCTTTTHH------HHHHHHHHTTCTTSCCEEEECCH
T ss_pred HHHHHhc---CCccCCHHHHHHHH----hCCCCEEEEEeCCcccCCcHHHH------HhHHHHHHHHcCCCeEEEEEEEC
Confidence 3455543 23344566788776 26788999999998 8999999 6777777765 3 78888755
Q ss_pred CChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 180 DTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 180 ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
| +...++..|++.+.|++++.- .|+.+....|..+.+++.+.|..++.
T Consensus 78 D--e~~~lA~~ygV~sIPTlilFk--~G~~v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 78 E--QSEAIGDRFGAFRFPATLVFT--GGNYRGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp H--HHHHHHHHHTCCSSSEEEEEE--TTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred C--CCHHHHHHcCCccCCEEEEEE--CCEEEEEEecCCCHHHHHHHHHHHhc
Confidence 4 778999999999999999996 69999999999999999999998884
No 115
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.39 E-value=1.4e-06 Score=71.72 Aligned_cols=91 Identities=19% Similarity=0.221 Sum_probs=69.0
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHH---------------------HHHHhcCC
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGW---------------------KVCSFYNM 193 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~---------------------~~~~~Y~~ 193 (305)
.+|++||++..+||.+|...-..+ .+...+|-..++.++.++.+..+.. .++..|++
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l--~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 111 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLAL--RELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNV 111 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHH--HHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTC
T ss_pred CCCEEEEEEEcCCChhhHHHHHHH--HHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCc
Confidence 479999999999999999875433 2222333334588888888765421 37889999
Q ss_pred CCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021955 194 DSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLP 228 (305)
Q Consensus 194 ~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~ 228 (305)
..+|++.|||+ .|+.+..+.|..+.++.+..+.+
T Consensus 112 ~~~P~~~lid~-~G~i~~~~~g~~~~e~~~~~~~~ 145 (152)
T 2lrt_A 112 TNLPSVFLVNR-NNELSARGENIKDLDEAIKKLLE 145 (152)
T ss_dssp CSCSEEEEEET-TTEEEEETTTCSCHHHHHHHHHG
T ss_pred ccCceEEEECC-CCeEEEecCCHHHHHHHHHHHHh
Confidence 99999999997 69999999998887777666543
No 116
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.39 E-value=1.7e-06 Score=73.06 Aligned_cols=94 Identities=20% Similarity=0.191 Sum_probs=70.3
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh-ccEEEEEecCCCh---hHHHHHHhcCCC----------------
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS-VNFIFWQEYDDTS---EGWKVCSFYNMD---------------- 194 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~-~nFIfwq~~~ds~---eg~~~~~~Y~~~---------------- 194 (305)
.+||+||++..+||..|+.+...+ ..+.+-++ .++.++.++.+.. ...++++.|++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l---~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 135 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPAL---DELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDL 135 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHH---HHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHH
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHH---HHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHh
Confidence 589999999999999999886544 22223233 5777777777643 446777777763
Q ss_pred -------CCceEEEEeCCCCeeEEEecCCCC--hHHHHHHHHHHHhh
Q 021955 195 -------SIPAVLVIDPITGQKICSWCGMIN--PQPLGEMLLPFMDR 232 (305)
Q Consensus 195 -------~~P~i~IIdprTGe~~~~~~G~~~--~~~~l~~L~~fl~~ 232 (305)
.+|++.|||+ .|+.+..+.|..+ .+++.+.|...+.+
T Consensus 136 ~~~~~~~~~P~~~lid~-~G~i~~~~~g~~~~~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 136 KAIGRALGMPTSVLVDP-QGCEIATIAGPAEWASEDALKLIRAATGK 181 (186)
T ss_dssp HTTTCCSSSSEEEEECT-TSBEEEEEESCCCTTSHHHHHHHHHHHC-
T ss_pred ccccccCCCCEEEEECC-CCCEEEEEecCCccCHHHHHHHHHHHhcc
Confidence 7999999997 6999999998764 78888888887753
No 117
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.38 E-value=8.2e-07 Score=73.18 Aligned_cols=90 Identities=14% Similarity=0.107 Sum_probs=68.1
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCC-----------------hhHHHHHHhcCCCCCc
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT-----------------SEGWKVCSFYNMDSIP 197 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds-----------------~eg~~~~~~Y~~~~~P 197 (305)
++|++||++.++||..|+.+-..+ .+...++-+.++.|+.++.+. .....+++.|++..+|
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l--~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 117 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSM--DRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLP 117 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHH--HHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHH--HHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcc
Confidence 589999999999999999875543 222233333578888888776 2245788999999999
Q ss_pred eEEEEeCCCCeeEEEecCCC--ChHHHHHHHH
Q 021955 198 AVLVIDPITGQKICSWCGMI--NPQPLGEMLL 227 (305)
Q Consensus 198 ~i~IIdprTGe~~~~~~G~~--~~~~~l~~L~ 227 (305)
++.|||+ .|+.+..+.|.. +..++++.+.
T Consensus 118 ~~~lid~-~G~i~~~~~G~~~~~~~~~~~~~~ 148 (158)
T 3hdc_A 118 DTFIVDR-KGIIRQRVTGGIEWDAPKVVSYLK 148 (158)
T ss_dssp EEEEECT-TSBEEEEEESCCCTTSHHHHHHHH
T ss_pred eEEEEcC-CCCEEEEEeCCCccchHHHHHHHH
Confidence 9999997 699999999975 5555555554
No 118
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.38 E-value=4.2e-07 Score=71.21 Aligned_cols=88 Identities=9% Similarity=0.093 Sum_probs=66.9
Q ss_pred HcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc-----cEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCe
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV-----NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQ 208 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~-----nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe 208 (305)
..+|++||+++++||..|+.+...+ ..+.+-+.. ++.|..++.+..+ +++ ++..+|++.++++ .|+
T Consensus 23 ~~~~~vlv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~v~~~~vd~~~~~---~~~--~v~~~Pt~~~~~~-~~~ 93 (121)
T 2djj_A 23 DDTKDVLIEFYAPWCGHCKALAPKY---EELGALYAKSEFKDRVVIAKVDATAND---VPD--EIQGFPTIKLYPA-GAK 93 (121)
T ss_dssp CTTSCEEEEEECSSCTTHHHHHHHH---HHHHHHHTTSSCTTSSEEEEEETTTSC---CSS--CCSSSSEEEEECS-SCT
T ss_pred cCCCCEEEEEECCCCHhHHHhhHHH---HHHHHHHhhcccCCceEEEEEECcccc---ccc--ccCcCCeEEEEeC-cCC
Confidence 4689999999999999999997654 355555554 7899999887654 444 8999999999986 344
Q ss_pred e-EEEecCCCChHHHHHHHHHHH
Q 021955 209 K-ICSWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 209 ~-~~~~~G~~~~~~~l~~L~~fl 230 (305)
. +..+.|..+.+++.+.|.+.+
T Consensus 94 ~~~~~~~G~~~~~~l~~~i~~~~ 116 (121)
T 2djj_A 94 GQPVTYSGSRTVEDLIKFIAENG 116 (121)
T ss_dssp TSCCCCCCCSCHHHHHHHHHHTS
T ss_pred CCceEecCCCCHHHHHHHHHhcc
Confidence 2 666889888887766665543
No 119
>3bq3_A Defective in cullin neddylation protein 1; ubiquitin, ubiquitination,SCF,cullin, E3 E2, cell cycle, protein degradation, ligase; 1.90A {Saccharomyces cerevisiae} PDB: 2is9_A* 3o2p_A 3o6b_A 3tdi_B 2l4e_A 2l4f_A
Probab=98.37 E-value=1.9e-07 Score=86.25 Aligned_cols=46 Identities=15% Similarity=0.299 Sum_probs=41.6
Q ss_pred chhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCCC
Q 021955 5 SIDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNEA 51 (305)
Q Consensus 5 s~~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~~ 51 (305)
...++++|.+||+| ||+++.+|++||+.++||||.|++.||+.+..
T Consensus 12 ~~~~~~~i~qF~~i-Tg~~~~~A~~~L~~~~WdLe~Al~~ff~~~~~ 57 (270)
T 3bq3_A 12 ASPEQEAIESFTSL-TKCDPKVSRKYLQRNHWNINYALNDYYDKEIG 57 (270)
T ss_dssp -CHHHHHHHHHHHH-HCCCHHHHHHHHHTTTTCHHHHHHHHHHHHCC
T ss_pred ccchHHHHHHHHHH-cCCCHHHHHHHHHHcCCCHHHHHHHHHhCccc
Confidence 34688999999999 89999999999999999999999999987653
No 120
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.37 E-value=1.2e-06 Score=81.31 Aligned_cols=100 Identities=16% Similarity=0.182 Sum_probs=78.0
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEE
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVI 202 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~II 202 (305)
.+|++++ +..+|++||+++++||..|+.+...+ ..+.+.+...+.|..++.+..+...+++.|++..+|++.++
T Consensus 25 ~~f~~~i---~~~~~~vlV~F~A~wC~~C~~~~p~~---~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~ 98 (298)
T 3ed3_A 25 KSFDKAI---HNTNYTSLVEFYAPWCGHCKKLSSTF---RKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVF 98 (298)
T ss_dssp HHHHHHH---TSSSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSSEEEEE
T ss_pred HHHHHHH---HhCCCeEEEEEECCCCHHHHHHHHHH---HHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccceEEEE
Confidence 3455555 35689999999999999999996543 45555556668888888888788899999999999999999
Q ss_pred eCCCCe-----------------eEEEecCCCChHHHHHHHHHHH
Q 021955 203 DPITGQ-----------------KICSWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 203 dprTGe-----------------~~~~~~G~~~~~~~l~~L~~fl 230 (305)
++ |+ ....+.|..+.+.+++-|.+.+
T Consensus 99 ~~--g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~ 141 (298)
T 3ed3_A 99 RP--PKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRI 141 (298)
T ss_dssp EC--CCC-------------CCCEEEECCSCCSHHHHHHHHHTTC
T ss_pred EC--CceeecccccccccccccccceeecCCcCHHHHHHHHHHhc
Confidence 86 43 3567889888888776665544
No 121
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.37 E-value=1.4e-06 Score=69.15 Aligned_cols=96 Identities=5% Similarity=0.012 Sum_probs=70.5
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc-cEEEEEecCCChhHHHHHHhcCCCCCceEE
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV-NFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~-nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~ 200 (305)
..+|++++. ++ +||+++++||..|+.+...+ ..+.+.+.. ++.|..++.+. ...++..|++..+|++.
T Consensus 14 ~~~f~~~~~-----~~-vlv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~~Pt~~ 82 (126)
T 1x5e_A 14 DENWRELLE-----GD-WMIEFYAPWCPACQNLQPEW---ESFAEWGEDLEVNIAKVDVTE--QPGLSGRFIINALPTIY 82 (126)
T ss_dssp TTTHHHHTS-----SE-EEEEEECSSCHHHHHHHHHH---HHHHHHHGGGTCEEEEEETTT--CHHHHHHTTCCSSSEEE
T ss_pred HHHHHHHhC-----CC-EEEEEECCCCHHHHHHhHHH---HHHHHHhccCCeEEEEEECcC--CHHHHHHcCCcccCEEE
Confidence 455665441 23 89999999999999996544 233344443 78899887764 45688999999999999
Q ss_pred EEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 201 VIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 201 IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
++ +.|+ +..+.|..+.++|.+.|...+.
T Consensus 83 ~~--~~G~-~~~~~G~~~~~~l~~~l~~~~~ 110 (126)
T 1x5e_A 83 HC--KDGE-FRRYQGPRTKKDFINFISDKEW 110 (126)
T ss_dssp EE--ETTE-EEECCSCCCHHHHHHHHHTCGG
T ss_pred EE--eCCe-EEEeecCCCHHHHHHHHHHHhh
Confidence 99 3688 5778998888877766665543
No 122
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.35 E-value=3.3e-06 Score=73.45 Aligned_cols=92 Identities=12% Similarity=0.021 Sum_probs=70.9
Q ss_pred HHHcCCeE-EEEeecCCCccchhhhhccCCCHHHHHHhh----ccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCC
Q 021955 132 ALAQDKWL-LVNLQSTKEFSSLMLNRDTWGNEAVSQIIS----VNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPIT 206 (305)
Q Consensus 132 Ak~~~KwL-LVniq~~~~f~c~~lnRDvw~n~~V~~~i~----~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprT 206 (305)
.+..++.+ ||+++++||..|+.+...+ ..+..-.. .++.|..++.+ +...+++.|++..+|+++|+. .
T Consensus 129 ~~~~~~~~~~v~F~a~wC~~C~~~~p~~---~~l~~~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~--~ 201 (226)
T 1a8l_A 129 IRNIDQDVRILVFVTPTCPYCPLAVRMA---HKFAIENTKAGKGKILGDMVEAI--EYPEWADQYNVMAVPKIVIQV--N 201 (226)
T ss_dssp HTTCCSCEEEEEEECSSCTTHHHHHHHH---HHHHHHHHHTTCCCEEEEEEEGG--GCHHHHHHTTCCSSCEEEEEE--T
T ss_pred HHhcCCCcEEEEEeCCCCCccHHHHHHH---HHHHHhcccccCCcEEEEEEEcc--cCHHHHHhCCCcccCeEEEEe--C
Confidence 34445555 9999999999999996543 33444444 47888888765 455689999999999988875 6
Q ss_pred CeeEEEecCCCChHHHHHHHHHHH
Q 021955 207 GQKICSWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 207 Ge~~~~~~G~~~~~~~l~~L~~fl 230 (305)
|+.+..+.|..+.++|.+.|.+.+
T Consensus 202 G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 202 GEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp TEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CceeEEEcCCCCHHHHHHHHHHhh
Confidence 888888999999998888887765
No 123
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.34 E-value=8.3e-07 Score=70.79 Aligned_cols=93 Identities=9% Similarity=0.073 Sum_probs=68.8
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh--ccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCee-EE
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQK-IC 211 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~--~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~-~~ 211 (305)
.+|++||+++++||..|+.+...+ ..+.+-++ .+++|..++.+.. ..++..|++..+|+++|++. .|+. ..
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~~-g~~~~~~ 97 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLEPIY---TSLGKKYKGQKDLVIAKMDATAN--DITNDQYKVEGFPTIYFAPS-GDKKNPI 97 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHHHHH---HHHHHHHTTSSSEEEEEECTTTS--CCCCSSCCCSSSSEEEEECT-TCTTSCE
T ss_pred CCCcEEEEEECCCChhHHHHHHHH---HHHHHHhcCCCCEEEEEecCCcC--HHHHhhcCCCcCCEEEEEeC-CCcccce
Confidence 589999999999999999997553 33444444 4699998876643 45667899999999999985 2322 12
Q ss_pred Eec-CCCChHHHHHHHHHHHhhC
Q 021955 212 SWC-GMINPQPLGEMLLPFMDRS 233 (305)
Q Consensus 212 ~~~-G~~~~~~~l~~L~~fl~~~ 233 (305)
.+. |..++++|.+.|...+...
T Consensus 98 ~~~gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 98 KFEGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp ECCSSCCSTTHHHHHHHHHSSSC
T ss_pred EecCCCcCHHHHHHHHHHhcccc
Confidence 356 6688888888888877543
No 124
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.34 E-value=2.6e-06 Score=74.49 Aligned_cols=100 Identities=10% Similarity=0.152 Sum_probs=77.1
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhcc---EEEEEecCCChhHHHHHHhcCCCCCc
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN---FIFWQEYDDTSEGWKVCSFYNMDSIP 197 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~n---FIfwq~~~ds~eg~~~~~~Y~~~~~P 197 (305)
-..+|++++ .++|.+||+++++||.+|+.+...+ ..+.+-++.. +.|..++.+. ...+++.|++..+|
T Consensus 21 ~~~~~~~~~----~~~~~v~v~F~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~P 91 (241)
T 3idv_A 21 NDANFDNFV----ADKDTVLLEFYAPWCGHCKQFAPEY---EKIANILKDKDPPIPVAKIDATS--ASVLASRFDVSGYP 91 (241)
T ss_dssp CTTTHHHHH----TTCSEEEEEEECTTCHHHHHHHHHH---HHHHHHHHTSSSCCCEEEEETTT--CHHHHHHTTCCSSS
T ss_pred cccCHHHHH----hcCCeEEEEEECCCCHHHHHhhHHH---HHHHHHHhhcCCceEEEEEeccC--CHHHHHhcCCCcCC
Confidence 345566654 5689999999999999999996543 3333333433 8888887664 45799999999999
Q ss_pred eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 198 AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 198 ~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
++.+++ .|+.+ .+.|..+.+++.+.+.+.+..
T Consensus 92 t~~~~~--~g~~~-~~~g~~~~~~l~~~i~~~~~~ 123 (241)
T 3idv_A 92 TIKILK--KGQAV-DYEGSRTQEEIVAKVREVSQP 123 (241)
T ss_dssp EEEEEE--TTEEE-ECCSCSCHHHHHHHHHHHHST
T ss_pred EEEEEc--CCCcc-cccCcccHHHHHHHHhhccCc
Confidence 999997 47766 588999999999888888764
No 125
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.33 E-value=4.4e-06 Score=69.14 Aligned_cols=95 Identities=12% Similarity=0.038 Sum_probs=71.4
Q ss_pred cCCeEEEEeecCCCcc-chhhhhccCCCHHHHHHhh-----ccEEEEEecCCC----hh---------------------
Q 021955 135 QDKWLLVNLQSTKEFS-SLMLNRDTWGNEAVSQIIS-----VNFIFWQEYDDT----SE--------------------- 183 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~-c~~lnRDvw~n~~V~~~i~-----~nFIfwq~~~ds----~e--------------------- 183 (305)
.+||+||++..+||.+ |...-..+ ..+.+-++ .++.++.++.|. ++
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l---~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~ 101 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKL---VQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTK 101 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHH---HHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHH---HHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHH
Confidence 4899999999999998 98764332 12222232 367777776652 22
Q ss_pred -HHHHHHhcCCCCCc---------------eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021955 184 -GWKVCSFYNMDSIP---------------AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (305)
Q Consensus 184 -g~~~~~~Y~~~~~P---------------~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~ 233 (305)
...+++.|++...| ++.|||+ .|+.+..+.|..+++++.+.|...+...
T Consensus 102 ~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~ll~~~ 166 (171)
T 2rli_A 102 QVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNP-DGLFTDYYGRSRSAEQISDSVRRHMAAF 166 (171)
T ss_dssp HHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECT-TSCEEEEEESSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECC-CCeEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 23677888887777 8999997 6999999999999999999999988754
No 126
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.32 E-value=2.1e-06 Score=85.94 Aligned_cols=119 Identities=13% Similarity=0.079 Sum_probs=91.5
Q ss_pred hhhhCCCccc--cccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc---cEEEEEecCCChhH
Q 021955 110 ASLYRPPFHV--MFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEG 184 (305)
Q Consensus 110 a~lFrPP~~l--~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~---nFIfwq~~~ds~eg 184 (305)
+.||.+...+ +-..+|++++ .+.+|.+||+++++||.+|+.+...+ +.+.+-+.. ++.|..++.+..+.
T Consensus 5 ~~Ly~~~~~V~~Lt~~~f~~~v---~~~~k~vlV~FyA~WC~pCk~~~P~l---~~la~~~~~~~~~v~~~~VD~d~d~~ 78 (519)
T 3t58_A 5 SVLYSSSDPLTLLDADSVRPTV---LGSSSAWAVEFFASWCGHAIAFAPTW---KELANDVKDWRPALNLAVLDCAEETN 78 (519)
T ss_dssp CCSCCTTSSSEEECTTTHHHHH---SSCSSEEEEEEECTTSHHHHHHHHHH---HHHHHHHGGGTTTEEEEEEETTSGGG
T ss_pred cccCCCCCCcEECChHHHHHHH---HhCCCeEEEEEECCCCHHHHHHHHHH---HHHHHHhhCcCCcEEEEEEECCcccc
Confidence 3466554443 3355677655 34579999999999999999996544 444445555 79999999988888
Q ss_pred HHHHHhcCCCCCceEEEEeCC--CCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021955 185 WKVCSFYNMDSIPAVLVIDPI--TGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (305)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdpr--TGe~~~~~~G~~~~~~~l~~L~~fl~~~~ 234 (305)
..+++.|++..+|++.++++- .|+.+....|..+++.+.+.|.+++....
T Consensus 79 ~~l~~~~~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~ 130 (519)
T 3t58_A 79 SAVCREFNIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHR 130 (519)
T ss_dssp HHHHHHTTCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhcc
Confidence 999999999999999999951 35555556677899999999999998655
No 127
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.32 E-value=3.3e-06 Score=68.75 Aligned_cols=92 Identities=16% Similarity=0.172 Sum_probs=69.0
Q ss_pred cCCeEEEEeecCCCcc--chhhhhccCCCHHHHHH-hhccEEEEEecCCChh-----------------------HHHHH
Q 021955 135 QDKWLLVNLQSTKEFS--SLMLNRDTWGNEAVSQI-ISVNFIFWQEYDDTSE-----------------------GWKVC 188 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~--c~~lnRDvw~n~~V~~~-i~~nFIfwq~~~ds~e-----------------------g~~~~ 188 (305)
.+|++||++..+||.+ |+..-..+ .+...+| -..++.|+.++.|... ...++
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l--~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 109 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSEL--REIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVA 109 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHH--HHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHH--HHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHH
Confidence 5899999999999999 99875433 1222222 2234888888877653 34788
Q ss_pred HhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 189 SFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 189 ~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
+.|++..+|++.|||+ .|+.+..+. +++++.+.|...+.+
T Consensus 110 ~~~~v~~~P~~~lid~-~G~i~~~~~---~~~~l~~~l~~ll~~ 149 (150)
T 3fw2_A 110 KQYSIYKIPANILLSS-DGKILAKNL---RGEELKKKIENIVEE 149 (150)
T ss_dssp HHTTCCSSSEEEEECT-TSBEEEESC---CHHHHHHHHHHHHHH
T ss_pred HHcCCCccCeEEEECC-CCEEEEccC---CHHHHHHHHHHHHhc
Confidence 8999999999999997 699887753 788888888887754
No 128
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.31 E-value=2.5e-06 Score=70.46 Aligned_cols=87 Identities=10% Similarity=0.098 Sum_probs=67.3
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCC-------------------ChhH---------
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDD-------------------TSEG--------- 184 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~d-------------------s~eg--------- 184 (305)
.+|++||++.++||..|+.+. +.+.++.++ ++.|+.++.+ +.+.
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~------~~l~~l~~~~~~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMA------DLLDRLTEKYREISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYG 109 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHH------HHHHHHHHHCTTEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHS
T ss_pred CCCEEEEEEECCCCcchhhhH------HHHHHHHHHcCCcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcC
Confidence 689999999999999999884 566666655 6777777776 2211
Q ss_pred ----------HHHHHhcCCCCCceEEEEeCCCCeeEEEecCCC-ChHHHHHHHHHHH
Q 021955 185 ----------WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMI-NPQPLGEMLLPFM 230 (305)
Q Consensus 185 ----------~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~-~~~~~l~~L~~fl 230 (305)
..++..|++..+|++.|||+ .|+.+. .|.. +.+++.+.|...+
T Consensus 110 ~~~~~~~~d~~~~~~~~~v~~~P~~~lid~-~G~i~~--~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 110 DPSWIMVMDDGSLVEKFNVRSIDYIVIMDK-SSNVLY--AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp CTTSEEEECCSHHHHHTTCCSSSEEEEEET-TCCEEE--EEESCCHHHHHHHHHHC-
T ss_pred CCCeeEEeChHHHHHHhCCCCceEEEEEcC-CCcEEE--eCCCCCHHHHHHHHHHHh
Confidence 26788899999999999997 688776 7877 8888877776654
No 129
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.30 E-value=2e-06 Score=71.41 Aligned_cols=99 Identities=12% Similarity=0.064 Sum_probs=63.1
Q ss_pred cccccHHHHHHHHHHcCCeEEEEeecCC--CccchhhhhccCCCHHHHHHhhc--cEE--EEEecCCChhHHHHHHhcCC
Q 021955 120 MFNGSFEKAKDAALAQDKWLLVNLQSTK--EFSSLMLNRDTWGNEAVSQIISV--NFI--FWQEYDDTSEGWKVCSFYNM 193 (305)
Q Consensus 120 ~~~gsf~~A~~~Ak~~~KwLLVniq~~~--~f~c~~lnRDvw~n~~V~~~i~~--nFI--fwq~~~ds~eg~~~~~~Y~~ 193 (305)
+-..+|++.+. ..+.++|++...| |.+|+.|. +.+.++.++ ++. |+.++.+ +...+++.|++
T Consensus 22 l~~~~f~~~i~----~~~~~vv~f~~~~~~C~~C~~l~------P~l~~la~~~~~v~~~~~~Vd~d--~~~~la~~~~V 89 (142)
T 2es7_A 22 VEASTVDDWIK----RVGDGVILLSSDPRRTPEVSDNP------VMIAELLREFPQFDWQVAVADLE--QSEAIGDRFNV 89 (142)
T ss_dssp CCCC------------CCSEEEEECCCSCC----CCHH------HHHHHHHHTCTTSCCEEEEECHH--HHHHHHHTTTC
T ss_pred cccccHHHHHH----hCCCEEEEEECCCCCCccHHHHH------HHHHHHHHHhcccceeEEEEECC--CCHHHHHhcCC
Confidence 44567888764 3445777888766 89999994 555555553 566 7777654 56789999999
Q ss_pred CCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 194 DSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 194 ~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
.++|++.++ +.|+.+..+.|..+.+++.+.|...+..
T Consensus 90 ~~iPT~~~f--k~G~~v~~~~G~~~~~~l~~~i~~~l~~ 126 (142)
T 2es7_A 90 RRFPATLVF--TDGKLRGALSGIHPWAELLTLMRSIVDT 126 (142)
T ss_dssp CSSSEEEEE--SCC----CEESCCCHHHHHHHHHHHHC-
T ss_pred CcCCeEEEE--eCCEEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 999999999 4799998899999999988888888764
No 130
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.25 E-value=3.5e-06 Score=71.53 Aligned_cols=99 Identities=8% Similarity=0.071 Sum_probs=72.6
Q ss_pred cCC-eEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCC--------h-------------------hHHH
Q 021955 135 QDK-WLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT--------S-------------------EGWK 186 (305)
Q Consensus 135 ~~K-wLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds--------~-------------------eg~~ 186 (305)
.+| ++||++.++||..|+..-..+ .....+|-+.++.|+.++.+. . ....
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l--~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~ 121 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHEL--VRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQE 121 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHH--HHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCH
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHH--HHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchH
Confidence 566 499999999999998775433 222233333468888888743 1 1235
Q ss_pred HHHhcCCCCCceEEEEeCCCCeeEEEe---------cCCCChHHHHHHHHHHHhhCCCC
Q 021955 187 VCSFYNMDSIPAVLVIDPITGQKICSW---------CGMINPQPLGEMLLPFMDRSPRK 236 (305)
Q Consensus 187 ~~~~Y~~~~~P~i~IIdprTGe~~~~~---------~G~~~~~~~l~~L~~fl~~~~~~ 236 (305)
+++.|++..+|++.|||+ .|+.+..+ .|..+++++.+.|...+...+..
T Consensus 122 ~~~~~~v~~~P~~~lid~-~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~~~~ 179 (196)
T 2ywi_A 122 VAKAYDAACTPDFYIFDR-DLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGRPVP 179 (196)
T ss_dssp HHHHHTCCEESEEEEEET-TCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTCCCC
T ss_pred HHHHhCCCCCCeEEEEcC-CCeEEEccccCcccccccCccCHHHHHHHHHHHHcCCCCC
Confidence 777888999999999997 69988773 47778999999999998865543
No 131
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.23 E-value=4.6e-06 Score=67.30 Aligned_cols=80 Identities=10% Similarity=0.167 Sum_probs=60.0
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHh-hccEEEEEecCCChhH----------------------HHHHHhc
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII-SVNFIFWQEYDDTSEG----------------------WKVCSFY 191 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i-~~nFIfwq~~~ds~eg----------------------~~~~~~Y 191 (305)
.+|++||++.++||.+|+..-..+-.++.+.+-+ +.++.++.++.+.... ..+...|
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 109 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLY 109 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhc
Confidence 3799999999999999998866654444455544 3568888888776422 1257788
Q ss_pred CCCCCceEEEEeCCCCeeEEEecC
Q 021955 192 NMDSIPAVLVIDPITGQKICSWCG 215 (305)
Q Consensus 192 ~~~~~P~i~IIdprTGe~~~~~~G 215 (305)
++..+|++.|||+ .|+.+....|
T Consensus 110 ~v~~~P~~~lid~-~G~i~~~~~~ 132 (142)
T 3eur_A 110 DLRAIPTLYLLDK-NKTVLLKDAT 132 (142)
T ss_dssp CCTTCSEEEEECT-TCBEEEEEEC
T ss_pred CCCcCCeEEEECC-CCcEEecCCC
Confidence 9999999999996 6888876544
No 132
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.23 E-value=4.5e-06 Score=66.94 Aligned_cols=90 Identities=10% Similarity=0.116 Sum_probs=64.6
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh-ccEEEEEecCCChh--HHHH--------------------HHhc
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS-VNFIFWQEYDDTSE--GWKV--------------------CSFY 191 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~-~nFIfwq~~~ds~e--g~~~--------------------~~~Y 191 (305)
.+|++||++.++||.+|+.+-..+-..+.+.+.++ .++.++.++.+... -.++ ++.|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 58999999999999999998655544555655554 45888888777432 1222 3378
Q ss_pred CCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021955 192 NMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLP 228 (305)
Q Consensus 192 ~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~ 228 (305)
++..+|++.|||+ .|+.+. +.++.+++.+.|.+
T Consensus 106 ~v~~~P~~~lid~-~G~i~~---~~~~~~~l~~~l~~ 138 (142)
T 3ewl_A 106 DIRATPTIYLLDG-RKRVIL---KDTSMEQLIDYLAT 138 (142)
T ss_dssp CCCSSSEEEEECT-TCBEEE---CSCCHHHHHHHHHC
T ss_pred CCCCCCeEEEECC-CCCEEe---cCCCHHHHHHHHHH
Confidence 8999999999997 688765 44667665555543
No 133
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.21 E-value=6.7e-07 Score=81.38 Aligned_cols=101 Identities=11% Similarity=0.132 Sum_probs=74.9
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCCCceEE
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~ 200 (305)
..|.+++..+ ..+|++||+|+.+||.+|+.|. +.+.++..+ ++.|..++++. ..++..|++..+|+++
T Consensus 121 ~~f~~~v~~~-~~~k~VvV~Fya~wC~~Ck~l~------p~l~~La~~~~~v~f~kVd~d~---~~l~~~~~I~~~PTll 190 (245)
T 1a0r_P 121 EQFLETIEKE-QKITTIVVHIYEDGIKGCDALN------SSLICLAAEYPMVKFCKIKASN---TGAGDRFSSDVLPTLL 190 (245)
T ss_dssp HHHHHHHHSS-CTTCEEEEEEECTTSTTHHHHH------HHHHHHHHHCTTSEEEEEEHHH---HCCTTSSCTTTCSEEE
T ss_pred HHHHHHHHHh-cCCCEEEEEEECCCChHHHHHH------HHHHHHHHHCCCCEEEEEeCCc---HHHHHHCCCCCCCEEE
Confidence 4466655433 3589999999999999999995 455555553 37888887754 4588899999999998
Q ss_pred EEeCCCCeeEEEecCCCC---hHHHHHHHHHHHhhCCC
Q 021955 201 VIDPITGQKICSWCGMIN---PQPLGEMLLPFMDRSPR 235 (305)
Q Consensus 201 IIdprTGe~~~~~~G~~~---~~~~l~~L~~fl~~~~~ 235 (305)
|+. .|+.+..+.|+.+ .+-..+.|..||.++..
T Consensus 191 ~~~--~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g~ 226 (245)
T 1a0r_P 191 VYK--GGELLSNFISVTEQLAEEFFTGDVESFLNEYGL 226 (245)
T ss_dssp EEE--TTEEEEEETTGGGGSCTTCCHHHHHHHHHTTTC
T ss_pred EEE--CCEEEEEEeCCcccccccccHHHHHHHHHHcCC
Confidence 886 6999988888643 22346678888887643
No 134
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.21 E-value=4.1e-06 Score=61.22 Aligned_cols=81 Identities=12% Similarity=0.017 Sum_probs=61.4
Q ss_pred EEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCC
Q 021955 139 LLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMIN 218 (305)
Q Consensus 139 LLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~ 218 (305)
.+|++.++||..|+.+...+ +.+.+-...++.|..++.+.. ..+++.|++..+|++.| .|+. .+.|..+
T Consensus 4 ~vv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~----~G~~--~~~G~~~ 72 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEVV---DEAKKEFGDKIDVEKIDIMVD--REKAIEYGLMAVPAIAI----NGVV--RFVGAPS 72 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHH---HHHHHHHCSSCCEEEECTTTC--GGGGGGTCSSCSSEEEE----TTTE--EEECSSC
T ss_pred EEEEEECCCCcchHHHHHHH---HHHHHHhcCCeEEEEEECCCC--HHHHHhCCceeeCEEEE----CCEE--EEccCCC
Confidence 47899999999999996533 333333444788888877643 46888999999999998 4665 6788888
Q ss_pred hHHHHHHHHHHH
Q 021955 219 PQPLGEMLLPFM 230 (305)
Q Consensus 219 ~~~~l~~L~~fl 230 (305)
.+++.+.|.+.+
T Consensus 73 ~~~l~~~l~~~l 84 (85)
T 1nho_A 73 REELFEAINDEM 84 (85)
T ss_dssp CHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 898888887765
No 135
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.20 E-value=3.9e-06 Score=66.85 Aligned_cols=94 Identities=10% Similarity=0.082 Sum_probs=66.2
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecC-------CCccchhhhhccCCCHHHHHHhhc---cEEEEEecCCC-----hhHHHH
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQST-------KEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDT-----SEGWKV 187 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~-------~~f~c~~lnRDvw~n~~V~~~i~~---nFIfwq~~~ds-----~eg~~~ 187 (305)
.+|++++..+ .+|+++|++.++ ||.+|+.+. +.+.++.++ ++.|..++++. .+...+
T Consensus 13 ~~~~~~~~~~--~~~~v~v~F~a~~~~~~~~wC~~C~~~~------p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~ 84 (123)
T 1wou_A 13 EEFHRAVEQH--NGKTIFAYFTGSKDAGGKSWCPDCVQAE------PVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDF 84 (123)
T ss_dssp HHHHHHHHTT--TTSEEEEEEECCBCTTCCBSCHHHHHHH------HHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHH
T ss_pred HHHHHHHHHh--CCCEEEEEEEccCCCCCCCcCHHHHHhh------HHHHHHHHHcCCCcEEEEEECCCchhhhchhHHH
Confidence 3455555432 489999999999 999999994 556666553 69999998853 234468
Q ss_pred HHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 188 CSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 188 ~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
++.|++..+|++++++. |.++....| .+++. |..||+
T Consensus 85 ~~~~~i~~~Pt~~~~~~--~~~~~g~~~-~~~~~----l~~~i~ 121 (123)
T 1wou_A 85 RKNLKVTAVPTLLKYGT--PQKLVESEC-LQANL----VEMLFS 121 (123)
T ss_dssp HHHHCCCSSSEEEETTS--SCEEEGGGG-GCHHH----HHHHHH
T ss_pred HHHCCCCeeCEEEEEcC--CceEecccc-CCHHH----HHHHHh
Confidence 88899999999999986 555544444 24443 455544
No 136
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.20 E-value=6.2e-06 Score=66.53 Aligned_cols=77 Identities=14% Similarity=0.059 Sum_probs=58.6
Q ss_pred HcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh--ccEEEEEecCCCh----------------------hHHHHHH
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTS----------------------EGWKVCS 189 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~--~nFIfwq~~~ds~----------------------eg~~~~~ 189 (305)
-.+|++||++..+||..|+.+...+ ..+.+-++ .++.++.++.+.. ....+++
T Consensus 26 ~~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 102 (144)
T 1i5g_A 26 LAGKTVFFYFSASWCPPSRAFTPQL---IDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTT 102 (144)
T ss_dssp GTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHH
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHH
Confidence 4689999999999999999886544 22333343 4788888877753 2467899
Q ss_pred hcCCCCCceEEEEeCCCCeeEEEe
Q 021955 190 FYNMDSIPAVLVIDPITGQKICSW 213 (305)
Q Consensus 190 ~Y~~~~~P~i~IIdprTGe~~~~~ 213 (305)
.|++..+|++.|||++.|+.+...
T Consensus 103 ~~~v~~~P~~~lid~~~G~i~~~~ 126 (144)
T 1i5g_A 103 GFDVKSIPTLVGVEADSGNIITTQ 126 (144)
T ss_dssp HTTCCSSSEEEEEETTTCCEEESC
T ss_pred HcCCCCCCEEEEEECCCCcEEecc
Confidence 999999999999995478877653
No 137
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.19 E-value=4.3e-06 Score=67.75 Aligned_cols=78 Identities=15% Similarity=0.130 Sum_probs=58.8
Q ss_pred HHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh--ccEEEEEecCCChh----------------------HHHHH
Q 021955 133 LAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSE----------------------GWKVC 188 (305)
Q Consensus 133 k~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~--~nFIfwq~~~ds~e----------------------g~~~~ 188 (305)
.-.+|++||++..+||..|+.+...+ ..+.+-++ .++.++.++.+... ...++
T Consensus 25 ~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 101 (146)
T 1o8x_A 25 SLAGKLVFFYFSASWCPPARGFTPQL---IEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLS 101 (146)
T ss_dssp GGTTCEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHH
T ss_pred HhCCCEEEEEEEccCCHHHHHHHHHH---HHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHH
Confidence 34689999999999999999886543 22333333 47777777777532 46789
Q ss_pred HhcCCCCCceEEEEeCCCCeeEEEe
Q 021955 189 SFYNMDSIPAVLVIDPITGQKICSW 213 (305)
Q Consensus 189 ~~Y~~~~~P~i~IIdprTGe~~~~~ 213 (305)
+.|++..+|++.|||++.|+.+..+
T Consensus 102 ~~~~v~~~Pt~~lid~~~G~i~~~~ 126 (146)
T 1o8x_A 102 KHFNVESIPTLIGVDADSGDVVTTR 126 (146)
T ss_dssp HHTTCCSSSEEEEEETTTCCEEESC
T ss_pred HHhCCCCCCEEEEEECCCCeEEEec
Confidence 9999999999999995578877653
No 138
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.18 E-value=7e-06 Score=68.07 Aligned_cols=94 Identities=13% Similarity=0.107 Sum_probs=68.2
Q ss_pred cCCe-EEEEee-cCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChh-------------------HHHHHHhcCC
Q 021955 135 QDKW-LLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE-------------------GWKVCSFYNM 193 (305)
Q Consensus 135 ~~Kw-LLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~e-------------------g~~~~~~Y~~ 193 (305)
.+|+ ++|++. ++||..|...-..+ .+...+|-..++.++.++.|+++ ...+++.|++
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l--~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 104 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAF--RDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGA 104 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHH--HHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTC
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHH--HHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCC
Confidence 4677 999999 99999999875544 23333444456888888888653 3467778888
Q ss_pred CC----CceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 194 DS----IPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 194 ~~----~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
.. +|++.|||+ .|+.+..+.|...+...++.+.+.|+
T Consensus 105 ~~~~~~~P~~~lid~-~G~i~~~~~g~~~~~~~~~~il~~l~ 145 (161)
T 3drn_A 105 KGFILPARITFVIDK-KGIIRHIYNSQMNPANHVNEALKALK 145 (161)
T ss_dssp CCSSSCCCEEEEECT-TSBEEEEEECSSCTTHHHHHHHHHHH
T ss_pred CCcCcccceEEEECC-CCEEEEEEecCCCCCcCHHHHHHHHH
Confidence 77 999999997 69999999986555555555555554
No 139
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.17 E-value=5.2e-06 Score=79.21 Aligned_cols=96 Identities=10% Similarity=0.048 Sum_probs=73.5
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCC------h-------------------hHHHHHH
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT------S-------------------EGWKVCS 189 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds------~-------------------eg~~~~~ 189 (305)
.+|++||++..+||.+|+.+...+ .+...+|=..++.++.++.+. + ....+++
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L--~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~ 158 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHV--VGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWT 158 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHH--HHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHH--HHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHH
Confidence 489999999999999999885443 122222323368888887642 1 1245777
Q ss_pred hcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021955 190 FYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (305)
Q Consensus 190 ~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~ 233 (305)
.|++..+|++.|||+ .|+.+..+.|..+++++.+.|.+.|.+.
T Consensus 159 ~ygV~~~Pt~~lID~-~G~Iv~~~~G~~~~~~l~~~I~~lL~e~ 201 (352)
T 2hyx_A 159 NYRNRYWPAEYLIDA-TGTVRHIKFGEGDYNVTETLVRQLLNDA 201 (352)
T ss_dssp HTTCCEESEEEEECT-TSBEEEEEESBCCHHHHHHHHHHHHHHH
T ss_pred HcCCCccCEEEEEeC-CCeEEEEEcCCCCHHHHHHHHHHHHhhc
Confidence 899999999999997 6999999999999999999999988653
No 140
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.15 E-value=7.7e-06 Score=65.72 Aligned_cols=78 Identities=15% Similarity=0.063 Sum_probs=58.4
Q ss_pred HHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh--ccEEEEEecCCChh----------------------HHHHH
Q 021955 133 LAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSE----------------------GWKVC 188 (305)
Q Consensus 133 k~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~--~nFIfwq~~~ds~e----------------------g~~~~ 188 (305)
.-.+|++||++..+||..|+.+...+ ..+.+-++ .++.++.++.+... ...++
T Consensus 25 ~~~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (144)
T 1o73_A 25 SLVGKTVFLYFSASWCPPCRGFTPVL---AEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELG 101 (144)
T ss_dssp GGTTCEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHH
T ss_pred HhCCCEEEEEEECcCCHHHHHHHHHH---HHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHH
Confidence 44689999999999999999885443 12222233 46777777777632 46788
Q ss_pred HhcCCCCCceEEEEeCCCCeeEEEe
Q 021955 189 SFYNMDSIPAVLVIDPITGQKICSW 213 (305)
Q Consensus 189 ~~Y~~~~~P~i~IIdprTGe~~~~~ 213 (305)
+.|++..+|++.|||+..|+.+...
T Consensus 102 ~~~~v~~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 102 KTFGVESIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp HHHTCCSSSEEEEEETTTCCEEESC
T ss_pred HHcCCCCCCEEEEEECCCCeEEecc
Confidence 9999999999999995578877653
No 141
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.15 E-value=1e-05 Score=66.68 Aligned_cols=94 Identities=14% Similarity=0.125 Sum_probs=66.8
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCC--------Ch-hHHHHHH-hc-------------
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDD--------TS-EGWKVCS-FY------------- 191 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~d--------s~-eg~~~~~-~Y------------- 191 (305)
.+||+||++..+||..|+..-..+ ++...+|-..++.++.++.| +. ...++++ .|
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l--~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 108 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEM--NQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVN 108 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHH--HHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSS
T ss_pred CCCEEEEEEEeccCCccHHHHHHH--HHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccC
Confidence 589999999999999998764433 22223333345777777764 22 2334444 32
Q ss_pred ----------------CC--CCCc---eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 192 ----------------NM--DSIP---AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 192 ----------------~~--~~~P---~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
.+ ..+| ++.|||+ .|+.+..+.|..+++++.+.|...|.
T Consensus 109 ~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 109 GENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNK-DGQVVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp STTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECT-TSCEEEEECTTSCGGGGHHHHHHHTT
T ss_pred CCchHHHHHHHHhcCCCccCCcccccccEEEECC-CCCEEEeeCCCCCHHHHHHHHHHHhh
Confidence 23 5678 8999997 69999999999899998888888765
No 142
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.15 E-value=1.7e-06 Score=76.98 Aligned_cols=102 Identities=13% Similarity=0.163 Sum_probs=74.6
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCCCce
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~~P~ 198 (305)
-..+|.+++..+ ..+|++||+|+.+||..|+.|. +.+.++... ++.|..++++ ...++..|++..+|+
T Consensus 106 ~~~~f~~~v~~~-~~~k~vvV~F~a~wC~~C~~l~------p~l~~la~~~~~v~f~~vd~~---~~~l~~~~~i~~~PT 175 (217)
T 2trc_P 106 TGEQFLETIEKE-QKVTTIVVNIYEDGVRGCDALN------SSLECLAAEYPMVKFCKIRAS---NTGAGDRFSSDVLPT 175 (217)
T ss_dssp SHHHHHHHHHHS-CTTCEEEEEEECTTSTTHHHHH------HHHHHHHTTCTTSEEEEEEHH---HHTCSTTSCGGGCSE
T ss_pred CHHHHHHHHHhc-CCCcEEEEEEECCCCccHHHHH------HHHHHHHHHCCCeEEEEEECC---cHHHHHHCCCCCCCE
Confidence 344566665432 2459999999999999999995 555665554 4788888876 456888999999999
Q ss_pred EEEEeCCCCeeEEEecCCCCh---HHHHHHHHHHHhhCC
Q 021955 199 VLVIDPITGQKICSWCGMINP---QPLGEMLLPFMDRSP 234 (305)
Q Consensus 199 i~IIdprTGe~~~~~~G~~~~---~~~l~~L~~fl~~~~ 234 (305)
|+|+. .|+.+..+.|..+. +-.++.|..||.++.
T Consensus 176 l~~~~--~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~g 212 (217)
T 2trc_P 176 LLVYK--GGELISNFISVAEQFAEDFFAADVESFLNEYG 212 (217)
T ss_dssp EEEEE--TTEEEEEETTGGGGSCSSCCHHHHHHHHHTTT
T ss_pred EEEEE--CCEEEEEEeCCcccCcccCCHHHHHHHHHHcC
Confidence 99996 69999888886542 222456777777543
No 143
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.15 E-value=7.1e-06 Score=68.61 Aligned_cols=94 Identities=13% Similarity=0.149 Sum_probs=64.9
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCC--------Ch-hHHHHH-----------------
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDD--------TS-EGWKVC----------------- 188 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~d--------s~-eg~~~~----------------- 188 (305)
.+||+||++.++||.+|+ .-..+ .+...+|-+.++.++.++.+ +. +..+++
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l--~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~ 107 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKEL--EALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVN 107 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHH--HHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSS
T ss_pred CCCEEEEEEEecCCCcch-hHHHH--HHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCC
Confidence 589999999999999998 43222 22223333345888888653 21 222333
Q ss_pred -------------HhcCCCCCc------eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 189 -------------SFYNMDSIP------AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 189 -------------~~Y~~~~~P------~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
..|.+..+| ++.|||+ .|+.+..+.|..+++++.+.|...|.+
T Consensus 108 ~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ll~~ 169 (171)
T 3cmi_A 108 GGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDK-KGKVYERYSSLTKPSSLSETIEELLKE 169 (171)
T ss_dssp STTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECS-SSCEEEEECTTSCGGGGHHHHHHHHTC
T ss_pred CccchHHHHHHHhccCCcCCCCcccccceEEEECC-CCCEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 235677789 9999997 699999999999999999988888764
No 144
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.13 E-value=8e-06 Score=59.63 Aligned_cols=82 Identities=13% Similarity=0.050 Sum_probs=61.3
Q ss_pred CeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecCC
Q 021955 137 KWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGM 216 (305)
Q Consensus 137 KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~ 216 (305)
+..+|++.++||..|+.+...+ ..+.+-...++.|..++.+.. ..+++.|++..+|++.| .|+. .+.|.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~----~G~~--~~~G~ 71 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVV---EEVANEMPDAVEVEYINVMEN--PQKAMEYGIMAVPTIVI----NGDV--EFIGA 71 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHH---HHHHHHCSSSEEEEEEESSSS--CCTTTSTTTCCSSEEEE----TTEE--ECCSS
T ss_pred ceEEEEEeCCCCCchHHHHHHH---HHHHHHcCCceEEEEEECCCC--HHHHHHCCCcccCEEEE----CCEE--eeecC
Confidence 4578999999999999995432 223333334788888877643 36788999999999998 4775 77898
Q ss_pred CChHHHHHHHHHH
Q 021955 217 INPQPLGEMLLPF 229 (305)
Q Consensus 217 ~~~~~~l~~L~~f 229 (305)
.+++++.+.|.+.
T Consensus 72 ~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 72 PTKEALVEAIKKR 84 (85)
T ss_dssp SSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHh
Confidence 8888888777654
No 145
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.13 E-value=1.5e-05 Score=65.55 Aligned_cols=95 Identities=12% Similarity=0.102 Sum_probs=64.9
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCC--------h-hHHHHH-Hhc-------------
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT--------S-EGWKVC-SFY------------- 191 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds--------~-eg~~~~-~~Y------------- 191 (305)
.+||+||++..+||..|...-..+ +....+|-..++.++.++.+. . +..+++ ..|
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l--~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 107 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQL--QEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVN 107 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHH--HHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCS
T ss_pred CCCEEEEEEeeccCCchHHHHHHH--HHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeec
Confidence 489999999999999997664332 122223333457777776542 1 223342 322
Q ss_pred ----------------C-----CCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 192 ----------------N-----MDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 192 ----------------~-----~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
. +..+|++.|||+ .|+.+..+.|..+++++.+.|...|.+
T Consensus 108 ~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ll~~ 168 (169)
T 2v1m_A 108 GSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDR-QGQPVKRYSPTTAPYDIEGDIMELLEK 168 (169)
T ss_dssp STTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECT-TSCEEEEECTTSCGGGGHHHHHHHHHC
T ss_pred CccccHHHHHHHhhcCCccCCcccccceEEEECC-CCCEEEEcCCCCCHHHHHHHHHHHhcc
Confidence 2 334589999997 799999999998999998888887753
No 146
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.12 E-value=9.4e-06 Score=67.98 Aligned_cols=77 Identities=14% Similarity=0.117 Sum_probs=58.3
Q ss_pred HHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh--ccEEEEEecCCChhH----------------------HHHH
Q 021955 133 LAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSEG----------------------WKVC 188 (305)
Q Consensus 133 k~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~--~nFIfwq~~~ds~eg----------------------~~~~ 188 (305)
.-.+|++||++..+||.+|+.+...+ ..+.+-++ .++.++.++.|.... ..++
T Consensus 45 ~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 121 (165)
T 3s9f_A 45 SLSGKTVFFYFSASWCPPCRGFTPQL---VEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALT 121 (165)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHH
T ss_pred HcCCCEEEEEEECCcChhHHHHHHHH---HHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHH
Confidence 33589999999999999999986444 22333333 367777777776532 6889
Q ss_pred HhcCCCCCceEEEEeCCCCeeEEE
Q 021955 189 SFYNMDSIPAVLVIDPITGQKICS 212 (305)
Q Consensus 189 ~~Y~~~~~P~i~IIdprTGe~~~~ 212 (305)
+.|++..+|++.|||+.+|+.+..
T Consensus 122 ~~~~v~~~Pt~~lid~~~G~iv~~ 145 (165)
T 3s9f_A 122 KKYSVESIPTLIGLNADTGDTVTT 145 (165)
T ss_dssp HHTTCCSSSEEEEEETTTCCEEES
T ss_pred HHcCCCCCCEEEEEeCCCCEEEec
Confidence 999999999999999855887765
No 147
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.11 E-value=1.1e-05 Score=68.96 Aligned_cols=95 Identities=12% Similarity=0.046 Sum_probs=67.8
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCC--------Ch-hHHHHH-Hh--------------
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDD--------TS-EGWKVC-SF-------------- 190 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~d--------s~-eg~~~~-~~-------------- 190 (305)
.+||+||++..+||..|...-..+ .+...+|-+.++.++.++.| ++ +..+++ +.
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l--~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~ 124 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETA--TTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVN 124 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHH--HHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSS
T ss_pred CCCEEEEEEecCCCCccHHHHHHH--HHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccC
Confidence 489999999999999997664332 22222333345777777765 22 233444 22
Q ss_pred ---------------cCCCCCc------eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 191 ---------------YNMDSIP------AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 191 ---------------Y~~~~~P------~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
|.+..+| ++.|||+ .|+.+..+.|..+++++.+.|...|.+
T Consensus 125 ~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ll~~ 186 (190)
T 2vup_A 125 GENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDR-DGVPVERFSPGASVKDIEKKLIPLLES 186 (190)
T ss_dssp STTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECT-TSCEEEEECTTCCHHHHHHHHHHHHHC
T ss_pred cccccHHHHHHHhhcCCcCCCccccccceEEEECC-CCcEEEEECCCCCHHHHHHHHHHHHhh
Confidence 3555678 9999997 699999999999999999999988864
No 148
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.10 E-value=1.5e-05 Score=69.49 Aligned_cols=99 Identities=9% Similarity=0.110 Sum_probs=73.4
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhcc---EEEEEecCCChhHHHHHHhcCCCCCc
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN---FIFWQEYDDTSEGWKVCSFYNMDSIP 197 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~n---FIfwq~~~ds~eg~~~~~~Y~~~~~P 197 (305)
-..+|++++ ..+|.++|+++++||..|+.+...+ ..+.+-++.. +.|..++.+. ...+++.|++..+|
T Consensus 136 ~~~~~~~~~----~~~~~~~v~f~a~wC~~C~~~~p~~---~~~a~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~P 206 (241)
T 3idv_A 136 TKENFDEVV----NDADIILVEFYAPWCGHCKKLAPEY---EKAAKELSKRSPPIPLAKVDATA--ETDLAKRFDVSGYP 206 (241)
T ss_dssp CTTTHHHHH----HHCSEEEEEEECTTCTGGGGTHHHH---HHHHHHHHTSSSCCCEEEEETTT--CHHHHHHTTCCSSS
T ss_pred cHHHHHHhh----ccCCeEEEEEECCCCHHHHHhHHHH---HHHHHHHhccCCcEEEEEEECCC--CHHHHHHcCCcccC
Confidence 356677666 4578999999999999999995432 2233333322 7888887664 35689999999999
Q ss_pred eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 198 AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 198 ~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
+++++.. |+.+. +.|..+.+++++.|.+.+.
T Consensus 207 t~~~~~~--g~~~~-~~g~~~~~~l~~~l~~~~~ 237 (241)
T 3idv_A 207 TLKIFRK--GRPYD-YNGPREKYGIVDYMIEQSG 237 (241)
T ss_dssp EEEEEET--TEEEE-CCSCCSHHHHHHHHHHHTT
T ss_pred EEEEEEC--CeEEE-ecCCCCHHHHHHHHHhhhC
Confidence 9999984 77665 8898899888877776543
No 149
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.09 E-value=1.4e-05 Score=78.42 Aligned_cols=99 Identities=9% Similarity=0.089 Sum_probs=79.1
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc-cEEEEEecCCChhHHHHHHhcCCCCCceE
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV-NFIFWQEYDDTSEGWKVCSFYNMDSIPAV 199 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~-nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i 199 (305)
-..+|++++ +.++++||+++++||..|+.|...+ +.+.+-++. ++.|..++.+.. ..+++.|++..||++
T Consensus 20 ~~~~f~~~~----~~~~~~lv~F~a~wC~~C~~~~p~~---~~~a~~~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~ 90 (504)
T 2b5e_A 20 ATDSFNEYI----QSHDLVLAEFFAPWCGHCKNMAPEY---VKAAETLVEKNITLAQIDCTEN--QDLCMEHNIPGFPSL 90 (504)
T ss_dssp CTTTHHHHH----TTCSEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTTCEEEEEETTTC--HHHHHHTTCCSSSEE
T ss_pred CHHHHHHHH----hcCCeEEEEEECCCCHHHHHhHHHH---HHHHHHhccCCeEEEEEECCCC--HHHHHhcCCCcCCEE
Confidence 356688765 4689999999999999999996543 345555555 599998877654 679999999999999
Q ss_pred EEEeCCCCee--EEEecCCCChHHHHHHHHHHH
Q 021955 200 LVIDPITGQK--ICSWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 200 ~IIdprTGe~--~~~~~G~~~~~~~l~~L~~fl 230 (305)
.++.. |+. +..+.|..+.+.+++.|.+.+
T Consensus 91 ~~~~~--g~~~~~~~~~G~~~~~~l~~~l~~~~ 121 (504)
T 2b5e_A 91 KIFKN--SDVNNSIDYEGPRTAEAIVQFMIKQS 121 (504)
T ss_dssp EEEET--TCTTCEEECCSCCSHHHHHHHHHHHT
T ss_pred EEEeC--CccccceeecCCCCHHHHHHHHHHhc
Confidence 99974 776 788999999999888877665
No 150
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.06 E-value=5.3e-06 Score=80.67 Aligned_cols=102 Identities=13% Similarity=0.124 Sum_probs=79.3
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEE
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~I 201 (305)
..+|++++ .....++.+||+++++||..|+.|...+ +.+.+.++..+.|..++.+. ...+++.|++..||++.+
T Consensus 8 ~~~f~~~i-~~~~~~~~~lv~F~a~wC~~C~~~~p~~---~~~a~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Ptl~~ 81 (481)
T 3f8u_A 8 DDNFESRI-SDTGSAGLMLVEFFAPWCGHAKRLAPEY---EAAATRLKGIVPLAKVDCTA--NTNTCNKYGVSGYPTLKI 81 (481)
T ss_dssp TTTHHHHT-TCCSSSSEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCCEEEEETTT--CHHHHHHTTCCEESEEEE
T ss_pred HHHHHHHH-HhCCCCCeEEEEEECCCCHHHHHhHHHH---HHHHHHhcCceEEEEEECCC--CHHHHHhcCCCCCCEEEE
Confidence 45577666 2223349999999999999999996543 45555666667788876664 567999999999999999
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 202 IDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 202 IdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
+. .|+.+..+.|..+.+.+++.|...+.
T Consensus 82 ~~--~g~~~~~~~G~~~~~~l~~~~~~~~~ 109 (481)
T 3f8u_A 82 FR--DGEEAGAYDGPRTADGIVSHLKKQAG 109 (481)
T ss_dssp EE--TTEEEEECCSCSSHHHHHHHHHHHTS
T ss_pred Ee--CCceeeeecCccCHHHHHHHHHhhcc
Confidence 95 58888889999999998888877764
No 151
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.05 E-value=1.7e-05 Score=68.03 Aligned_cols=94 Identities=10% Similarity=0.003 Sum_probs=68.8
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChh-----------------------HHHHHHh
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE-----------------------GWKVCSF 190 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~e-----------------------g~~~~~~ 190 (305)
.+||+||++. .+||..|...-..+ .....+|-..++.++.++.|+.+ ...+++.
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l--~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 121 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAF--SKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQA 121 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHH--HHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHH
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHH--HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHH
Confidence 4799999999 99999998764433 12222333336777777777632 2356677
Q ss_pred cCCC-----CCceEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHHh
Q 021955 191 YNMD-----SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFMD 231 (305)
Q Consensus 191 Y~~~-----~~P~i~IIdprTGe~~~~~~G~~----~~~~~l~~L~~fl~ 231 (305)
|++. .+|++.|||+ .|+.+..+.|.. +++++++.|...+.
T Consensus 122 ~~v~~~~g~~~P~~~lid~-~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 122 AGVLNADGVADRVTFIVDP-NNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp HTCBCTTSSBCEEEEEECT-TSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred hCCcccCCCccceEEEEcC-CCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 8887 8999999997 699999887764 67888888887765
No 152
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.04 E-value=2.4e-05 Score=74.36 Aligned_cols=100 Identities=16% Similarity=0.178 Sum_probs=77.6
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHh------hccEEEEEecCCChhHHHHHHhcCCCC
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII------SVNFIFWQEYDDTSEGWKVCSFYNMDS 195 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i------~~nFIfwq~~~ds~eg~~~~~~Y~~~~ 195 (305)
..+|++++ ..+|++||+++++||..|+.|...+ +.+.+.+ +.++.|..++.+.. ..+++.|++..
T Consensus 12 ~~~f~~~~----~~~~~vlV~F~a~wC~~C~~~~p~~---~~~a~~~~~~~~~~~~v~~~~Vd~~~~--~~l~~~~~v~~ 82 (382)
T 2r2j_A 12 TENIDEIL----NNADVALVNFYADWCRFSQMLHPIF---EEASDVIKEEFPNENQVVFARVDCDQH--SDIAQRYRISK 82 (382)
T ss_dssp TTTHHHHH----HHCSEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTCC---CCEEEEEEETTTC--HHHHHHTTCCE
T ss_pred HHHHHHHH----hcCCeEEEEEECCCCHHHHHHHHHH---HHHHHHHHhhcCCCCceEEEEEECCcc--HHHHHhcCCCc
Confidence 45677765 3579999999999999999996432 3344444 33588988877653 67999999999
Q ss_pred CceEEEEeCCCCeeEE-EecCCCChHHHHHHHHHHHhh
Q 021955 196 IPAVLVIDPITGQKIC-SWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 196 ~P~i~IIdprTGe~~~-~~~G~~~~~~~l~~L~~fl~~ 232 (305)
||++.++. .|+.+. .+.|..+.+.+++.|...+..
T Consensus 83 ~Pt~~~f~--~G~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (382)
T 2r2j_A 83 YPTLKLFR--NGMMMKREYRGQRSVKALADYIRQQKSD 118 (382)
T ss_dssp ESEEEEEE--TTEEEEEECCSCCSHHHHHHHHHHHHSC
T ss_pred CCEEEEEe--CCcEeeeeecCcchHHHHHHHHHHhccC
Confidence 99999885 588776 489999999998888888753
No 153
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.03 E-value=1.3e-05 Score=68.75 Aligned_cols=93 Identities=10% Similarity=0.051 Sum_probs=68.6
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChh--------------------------HHHH
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE--------------------------GWKV 187 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~e--------------------------g~~~ 187 (305)
.+|++||++. .+||..|...-..+ .....+|-..++.++.++.|+++ ...+
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l--~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAF--DKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSI 109 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHH--HHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHH--HHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHH
Confidence 5899999999 99999998775433 22223333456888888877643 2356
Q ss_pred HHhcCCC-----CCceEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHH
Q 021955 188 CSFYNMD-----SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFM 230 (305)
Q Consensus 188 ~~~Y~~~-----~~P~i~IIdprTGe~~~~~~G~~----~~~~~l~~L~~fl 230 (305)
++.|++. .+|++.|||+ .|+.+..+.|.. +++++++.|....
T Consensus 110 ~~~~~v~~~~g~~~P~~~lid~-~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 110 SRDYDVLFEEAIALRGAFLIDK-NMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HHHTTCEETTTEECEEEEEEET-TTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HHHhCCcccCCcccceEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 7788887 8999999997 699999888765 5677777777655
No 154
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.03 E-value=9.9e-06 Score=66.49 Aligned_cols=90 Identities=8% Similarity=-0.092 Sum_probs=63.8
Q ss_pred cCC-eEEEEee-cCCCccchhhhhccCCCHHHHHHhh----ccEEEEEecCCChh---------------------HHHH
Q 021955 135 QDK-WLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIIS----VNFIFWQEYDDTSE---------------------GWKV 187 (305)
Q Consensus 135 ~~K-wLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~----~nFIfwq~~~ds~e---------------------g~~~ 187 (305)
.+| |+||++. ++||..|...- +.+.++.+ .++.++.++.|+++ ...+
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~------~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 107 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGEL------DQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAV 107 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHH------HHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHH
T ss_pred cCCCCEEEEEECCCCCCchHHHH------HHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHH
Confidence 355 9999998 99999998763 44444443 35778888777643 4567
Q ss_pred HHhcCCC----CCc--eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 188 CSFYNMD----SIP--AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 188 ~~~Y~~~----~~P--~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
++.|++. .+| ++.|||+ .|+.+..+.|..+....++.|...|+
T Consensus 108 ~~~~~v~~~~~~~p~~~~~lid~-~G~i~~~~~g~~~~~~~~~~l~~~l~ 156 (160)
T 1xvw_A 108 SQAYGVFNEQAGIANRGTFVVDR-SGIIRFAEMKQPGEVRDQRLWTDALA 156 (160)
T ss_dssp HHHTTCEETTTTEECSEEEEECT-TSBEEEEEECCTTCCCCHHHHHHHHH
T ss_pred HHHcCCccccCCCeeeeEEEECC-CCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 7888886 889 9999997 69999998887644333444444443
No 155
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.03 E-value=4.6e-06 Score=67.36 Aligned_cols=82 Identities=17% Similarity=0.204 Sum_probs=59.9
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh----ccEEEEEecCCChh------------------------HHH
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS----VNFIFWQEYDDTSE------------------------GWK 186 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~----~nFIfwq~~~ds~e------------------------g~~ 186 (305)
.+|++||++..+||.+|...- +.+.++.+ .++.++.++.|... ...
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~------~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 104 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARN------VQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESE 104 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHH------HHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSH
T ss_pred CCCEEEEEEEcCcCHHHHHHH------HHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchH
Confidence 589999999999999998884 55555554 35788877777432 135
Q ss_pred HHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHH
Q 021955 187 VCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEML 226 (305)
Q Consensus 187 ~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L 226 (305)
+++.|++..+|++.|||+ .|+.+.... .++++.+.|
T Consensus 105 ~~~~~~v~~~P~~~lid~-~G~i~~~~~---~~~~l~~~l 140 (143)
T 4fo5_A 105 LYKKYDLRKGFKNFLIND-EGVIIAANV---TPEKLTEIL 140 (143)
T ss_dssp HHHHTTGGGCCCEEEECT-TSBEEEESC---CHHHHHHHH
T ss_pred HHHHcCCCCCCcEEEECC-CCEEEEccC---CHHHHHHHH
Confidence 777899999999999997 698877643 455444333
No 156
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.03 E-value=1.6e-05 Score=67.83 Aligned_cols=96 Identities=14% Similarity=0.087 Sum_probs=65.2
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCC---------hhHHHHHH-h--------------
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT---------SEGWKVCS-F-------------- 190 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds---------~eg~~~~~-~-------------- 190 (305)
++|++||++..+||.+|...-..+ .+...+|=..++.++.++.|. .+-.++++ .
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l--~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~ 122 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETA--TTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVN 122 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHH--HHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCS
T ss_pred CCCEEEEEEecCCCCCcHHHHHHH--HHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccC
Confidence 589999999999999998864332 222233333457777776541 22223332 1
Q ss_pred ------------------cCCCCCc---eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021955 191 ------------------YNMDSIP---AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (305)
Q Consensus 191 ------------------Y~~~~~P---~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~ 233 (305)
|.+..+| ++.|||+ .|+.+..+.|..+++++.+.|.+.|...
T Consensus 123 ~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~-~G~i~~~~~g~~~~~~l~~~i~~lL~~~ 185 (187)
T 3dwv_A 123 GENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDR-DGVPVERFSPGASVKDIEEKLIPLLGSA 185 (187)
T ss_dssp CC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECT-TSCEEEEECTTCCHHHHHHHHHHHC---
T ss_pred CcchhHHHHHHHhhcCCccCCCccccceeEEEECC-CCCEEEEECCCCCHHHHHHHHHHHHhcC
Confidence 2234567 9999997 6999999999999999999998887643
No 157
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.03 E-value=1.8e-05 Score=67.16 Aligned_cols=95 Identities=13% Similarity=0.124 Sum_probs=70.3
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChh-----------------------HHHHHHh
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE-----------------------GWKVCSF 190 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~e-----------------------g~~~~~~ 190 (305)
.+||+||++. .+||..|...-..+ +....+|=..++.++.++.|.++ ...+++.
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l--~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDV--QKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQ 107 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHH--HHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHH
T ss_pred CCCCEEEEEECCCCCcchHHHHHHH--HHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHH
Confidence 4799999999 99999998774433 22223333346888888877642 2356777
Q ss_pred cCCC------CCceEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHHhh
Q 021955 191 YNMD------SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFMDR 232 (305)
Q Consensus 191 Y~~~------~~P~i~IIdprTGe~~~~~~G~~----~~~~~l~~L~~fl~~ 232 (305)
|++. .+|++.|||+ .|+.+..+.|.. +++++++.|......
T Consensus 108 ~~v~~~~~g~~~P~~~lid~-~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~ 158 (187)
T 1we0_A 108 FDVLNEETGLADRGTFIIDP-DGVIQAIEINADGIGRDASTLINKVKAAQYV 158 (187)
T ss_dssp TTCEETTTTEECEEEEEECT-TSBEEEEEEECTTSCCCTTHHHHHHHHHHHH
T ss_pred hCCCcCCCCceeeEEEEECC-CCeEEEEEecCCCCCCCHHHHHHHHHHHhhh
Confidence 8886 8999999997 699999888754 688888888887753
No 158
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.02 E-value=1e-05 Score=68.37 Aligned_cols=94 Identities=11% Similarity=0.031 Sum_probs=67.7
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh---ccEEEEEecCCC--------h-------------------hH
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS---VNFIFWQEYDDT--------S-------------------EG 184 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~---~nFIfwq~~~ds--------~-------------------eg 184 (305)
.+|++||++.++||..|+..- +.+.++.+ ..+.|+.++.+. . ..
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~------~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~ 105 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSI------GELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDET 105 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTH------HHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSS
T ss_pred CCCEEEEEEECCCCccHHHHH------HHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCc
Confidence 479999999999999998764 33343333 237777777642 1 12
Q ss_pred HHHHHhcCCCCCceEEEEeCCCCeeEEEe--------cCCCChHHHHHHHHHHHhhCCC
Q 021955 185 WKVCSFYNMDSIPAVLVIDPITGQKICSW--------CGMINPQPLGEMLLPFMDRSPR 235 (305)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdprTGe~~~~~--------~G~~~~~~~l~~L~~fl~~~~~ 235 (305)
..+++.|++..+|++.|||+ .|+.+... .|..+++++.+.|...+...+.
T Consensus 106 ~~~~~~~~v~~~P~~~lid~-~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~~~ 163 (188)
T 2cvb_A 106 QEVAKAYRALRTPEVFLFDE-RRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGEEP 163 (188)
T ss_dssp SHHHHHTTCCEESEEEEECT-TCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTCCC
T ss_pred chHHHHcCCCCCCeEEEECC-CCcEEEEEecCCccccccccCHHHHHHHHHHHHcCCCC
Confidence 35777888999999999996 68877661 1233688899999988876544
No 159
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.01 E-value=3.5e-06 Score=66.38 Aligned_cols=85 Identities=11% Similarity=0.015 Sum_probs=60.6
Q ss_pred HHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCCh--hHHHHHHhcCCCCCceEEEEeC
Q 021955 127 KAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTS--EGWKVCSFYNMDSIPAVLVIDP 204 (305)
Q Consensus 127 ~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~--eg~~~~~~Y~~~~~P~i~IIdp 204 (305)
+++..|+..+|..+|++..+||..|+.|. +.+.++. +.|-+..++.+.. +...+++.|++..+|++.|
T Consensus 3 ~~~~la~~~~k~~vV~F~A~WC~~C~~~~------p~~~~~a-~~~~~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--- 72 (106)
T 3kp8_A 3 LAVGLAAHLRQIGGTMYGAYWCPHCQDQK------ELFGAAF-DQVPYVECSPNGPGTPQAQECTEAGITSYPTWII--- 72 (106)
T ss_dssp HHHHHHHHHHHHTCEEEECTTCHHHHHHH------HHHGGGG-GGSCEEESCTTCTTSCCCHHHHHTTCCSSSEEEE---
T ss_pred HhhHHHHhcCCCEEEEEECCCCHHHHHHH------HHHHHHH-HhCCEEEEecccccchhHHHHHHcCCeEeCEEEE---
Confidence 45666777788889999999999999994 3333332 2333444554444 5678999999999999777
Q ss_pred CCCeeEEEecCCCChHHHHHH
Q 021955 205 ITGQKICSWCGMINPQPLGEM 225 (305)
Q Consensus 205 rTGe~~~~~~G~~~~~~~l~~ 225 (305)
.|+. +.|..+.+++.+.
T Consensus 73 -~G~~---~~G~~~~~~l~~~ 89 (106)
T 3kp8_A 73 -NGRT---YTGVRSLEALAVA 89 (106)
T ss_dssp -TTEE---EESCCCHHHHHHH
T ss_pred -CCEE---ecCCCCHHHHHHH
Confidence 4763 7798887765443
No 160
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.01 E-value=1.4e-05 Score=77.72 Aligned_cols=102 Identities=12% Similarity=0.088 Sum_probs=77.1
Q ss_pred cccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCCCc
Q 021955 120 MFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIP 197 (305)
Q Consensus 120 ~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~~P 197 (305)
+-..+|+++. ...+|.+||+++++||.+|+.+...+ ..+.+.+.. +++|..++.+.. .++..|++..||
T Consensus 357 ~~~~~~~~~~---~~~~k~vlv~f~a~wC~~C~~~~p~~---~~l~~~~~~~~~v~~~~id~~~~---~~~~~~~v~~~P 427 (481)
T 3f8u_A 357 VVAENFDEIV---NNENKDVLIEFYAPWCGHCKNLEPKY---KELGEKLSKDPNIVIAKMDATAN---DVPSPYEVRGFP 427 (481)
T ss_dssp ECTTTHHHHH---TCTTCEEEEEEECTTBHHHHHHHHHH---HHHHHHTTTCSSEEEEEEETTSS---CCCTTCCCCSSS
T ss_pred ecccCHHHHh---hcCCCcEEEEEecCcChhHHHhhHHH---HHHHHHhccCCCEEEEEEECCch---hhHhhCCCcccC
Confidence 4455677665 44689999999999999999996543 344444444 699999988765 577889999999
Q ss_pred eEEEEeCCCCe-eEEEecCCCChHHHHHHHHHHHh
Q 021955 198 AVLVIDPITGQ-KICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 198 ~i~IIdprTGe-~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
++.+++. .|+ .+..+.|..+.++|++.|.+.+.
T Consensus 428 t~~~~~~-~~~~~~~~~~G~~~~~~l~~~l~~~~~ 461 (481)
T 3f8u_A 428 TIYFSPA-NKKLNPKKYEGGRELSDFISYLQREAT 461 (481)
T ss_dssp EEEEECT-TCTTSCEECCSCCSHHHHHHHHHHHCS
T ss_pred EEEEEeC-CCeEeeeEeCCCCCHHHHHHHHHHhcC
Confidence 9999985 344 26778899998887777766554
No 161
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=98.00 E-value=8.8e-06 Score=65.60 Aligned_cols=99 Identities=17% Similarity=0.268 Sum_probs=72.0
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCCCce
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~~P~ 198 (305)
-..+|.+++..+ ..+++++|+++.+||.+|+.| ++.+.++.++ +..|+.++++.- +..|++.+.|+
T Consensus 9 t~~~f~~~v~~~-~~~~~vvv~F~a~wc~~C~~~------~p~l~~la~~~~~v~f~kvd~d~~-----~~~~~v~~~PT 76 (118)
T 3evi_A 9 SGNQYVNEVTNA-EEDVWVIIHLYRSSIPMCLLV------NQHLSLLARKFPETKFVKAIVNSC-----IQHYHDNCLPT 76 (118)
T ss_dssp CGGGHHHHTTTC-CTTCEEEEEEECTTSHHHHHH------HHHHHHHHHHCTTSEEEEEEGGGT-----STTCCGGGCSE
T ss_pred CHHHHHHHHHhc-CCCCeEEEEEeCCCChHHHHH------HHHHHHHHHHCCCCEEEEEEhHHh-----HHHCCCCCCCE
Confidence 345566655432 234599999999999999999 4666666655 367888888753 58899999999
Q ss_pred EEEEeCCCCeeEEEecCCCC---hHHHHHHHHHHHhhC
Q 021955 199 VLVIDPITGQKICSWCGMIN---PQPLGEMLLPFMDRS 233 (305)
Q Consensus 199 i~IIdprTGe~~~~~~G~~~---~~~~l~~L~~fl~~~ 233 (305)
+++.- .|+.+..+.|..+ .+--.+.|..+|.+.
T Consensus 77 ~~~fk--~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 77 IFVYK--NGQIEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp EEEEE--TTEEEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred EEEEE--CCEEEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 99997 5999999888642 111255677777654
No 162
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.00 E-value=2.4e-05 Score=73.24 Aligned_cols=96 Identities=14% Similarity=0.167 Sum_probs=71.2
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhc------cCCCHHHHHHhhc-cEEEEEecCCChhHHHHHHhcCCCC
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRD------TWGNEAVSQIISV-NFIFWQEYDDTSEGWKVCSFYNMDS 195 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRD------vw~n~~V~~~i~~-nFIfwq~~~ds~eg~~~~~~Y~~~~ 195 (305)
.+|++++ .+++.+||+++++||. |+.+... +|. .+.+.++. ++.|..++.+.. ..+++.|++..
T Consensus 19 ~~f~~~i----~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~--~~a~~~~~~~v~~~~Vd~~~~--~~l~~~~~v~~ 89 (350)
T 1sji_A 19 KNFKQVL----KKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLE--LVAQVLEHKDIGFVMVDAKKE--AKLAKKLGFDE 89 (350)
T ss_dssp HHHHHHH----TTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHH--HHHHHGGGSSEEEEEEETTTT--HHHHHHHTCCS
T ss_pred HHHHHHH----hhCCeEEEEEECCCCc-chhhCchhhhhhHHHH--HHHHHHhhcCcEEEEEeCCCC--HHHHHhcCCCc
Confidence 3466554 4589999999999999 9777433 132 45566665 599998877654 57999999999
Q ss_pred CceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021955 196 IPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 196 ~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl 230 (305)
||++.++. .|+ +..+.|..+.+.+++.|...+
T Consensus 90 ~Pt~~~~~--~g~-~~~~~G~~~~~~l~~~i~~~~ 121 (350)
T 1sji_A 90 EGSLYVLK--GDR-TIEFDGEFAADVLVEFLLDLI 121 (350)
T ss_dssp TTEEEEEE--TTE-EEEECSCCCHHHHHHHHHTTS
T ss_pred cceEEEEE--CCc-EEEecCCCCHHHHHHHHHHhc
Confidence 99999994 577 567899888887665554433
No 163
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=97.97 E-value=2.7e-05 Score=56.01 Aligned_cols=73 Identities=11% Similarity=0.189 Sum_probs=55.6
Q ss_pred EEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCC-
Q 021955 139 LLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMI- 217 (305)
Q Consensus 139 LLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~- 217 (305)
+.|++..+||.+|+.+...+ +.+.+-.+.++.+..++ ...+++.|++..+|++.| .|+.+.. |..
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l---~~~~~~~~~~~~~~~v~-----~~~~~~~~~v~~~Pt~~~----~G~~~~~--G~~~ 67 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNA---REAVKELGIDAEFEKIK-----EMDQILEAGLTALPGLAV----DGELKIM--GRVA 67 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHH---HHHHHHTTCCEEEEEEC-----SHHHHHHHTCSSSSCEEE----TTEEEEC--SSCC
T ss_pred cEEEEEcCCChhHHHHHHHH---HHHHHHcCCceEEEEec-----CHHHHHHCCCCcCCEEEE----CCEEEEc--CCCC
Confidence 46889999999999996544 34444455578888876 456888999999999998 5876654 887
Q ss_pred ChHHHHHH
Q 021955 218 NPQPLGEM 225 (305)
Q Consensus 218 ~~~~~l~~ 225 (305)
+.+++.+.
T Consensus 68 ~~~~l~~~ 75 (77)
T 1ilo_A 68 SKEEIKKI 75 (77)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 77776654
No 164
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=97.95 E-value=4.5e-05 Score=61.50 Aligned_cols=86 Identities=13% Similarity=0.117 Sum_probs=66.0
Q ss_pred HHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh-ccEEEEEecCCChhH--HHHHHhcCCC-CCceEEEEeCCCC
Q 021955 132 ALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS-VNFIFWQEYDDTSEG--WKVCSFYNMD-SIPAVLVIDPITG 207 (305)
Q Consensus 132 Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~-~nFIfwq~~~ds~eg--~~~~~~Y~~~-~~P~i~IIdprTG 207 (305)
..+++|+++|+.|++||.+|.++- +.+.++.+ .+.-|+.+|++.-.. ..++..|++. .-|+++++- .|
T Consensus 20 ii~~~~~vvi~khatwCgpc~~~~------~~~e~~~~~~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~il~k--~G 91 (112)
T 3iv4_A 20 VIEENKYVFVLKHSETCPISANAY------DQFNKFLYERDMDGYYLIVQQERDLSDYIAKKTNVKHESPQAFYFV--NG 91 (112)
T ss_dssp HHHHCSEEEEEEECTTCHHHHHHH------HHHHHHHHHHTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEEEEEE--TT
T ss_pred HHhcCCCEEEEEECCcCHhHHHHH------HHHHHHhccCCceEEEEEeecCchhhHHHHHHhCCccCCCeEEEEE--CC
Confidence 334499999999999999999994 55566654 456777777775443 4689999998 599999996 69
Q ss_pred eeEEEe-cCCCChHHHHHH
Q 021955 208 QKICSW-CGMINPQPLGEM 225 (305)
Q Consensus 208 e~~~~~-~G~~~~~~~l~~ 225 (305)
+.++.. .|.++.+.+.+.
T Consensus 92 ~~v~~~SH~~I~~~~l~~~ 110 (112)
T 3iv4_A 92 EMVWNRDHGDINVSSLAQA 110 (112)
T ss_dssp EEEEEEEGGGCSHHHHHHH
T ss_pred EEEEEeeccccCHHHHHHh
Confidence 998874 467888866543
No 165
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.93 E-value=1.8e-05 Score=73.91 Aligned_cols=99 Identities=11% Similarity=0.150 Sum_probs=73.5
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCCCce
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~~P~ 198 (305)
-..+|++.. ...+|.+||+++++||..|+.|...+ ..+.+.++. +++|..+|.+... +..|++..||+
T Consensus 255 ~~~~f~~~~---~~~~k~~lv~f~a~wC~~C~~~~p~~---~~la~~~~~~~~v~~~~vd~~~~~----~~~~~v~~~Pt 324 (361)
T 3uem_A 255 VGKNFEDVA---FDEKKNVFVEFYAPWCGHCKQLAPIW---DKLGETYKDHENIVIAKMDSTANE----VEAVKVHSFPT 324 (361)
T ss_dssp CTTTHHHHH---TCTTCEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTCSSEEEEEEETTTCB----CSSCCCCSSSE
T ss_pred ecCchhhhc---ccCCCcEEEEEecCcCHhHHHHHHHH---HHHHHHhccCCcEEEEEEECCccc----hhhcCCcccCe
Confidence 345676655 45689999999999999999996433 334444444 4999999887666 57899999999
Q ss_pred EEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021955 199 VLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (305)
Q Consensus 199 i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~ 233 (305)
+.++....|+.+..+.|..+.++|+ +||+++
T Consensus 325 ~~~~~~~~~~~~~~~~G~~~~~~l~----~~l~~~ 355 (361)
T 3uem_A 325 LKFFPASADRTVIDYNGERTLDGFK----KFLESG 355 (361)
T ss_dssp EEEECSSSSCCCEECCSCSSHHHHH----HHHTTT
T ss_pred EEEEECCCCcceeEecCCCCHHHHH----HHHHhc
Confidence 9999764466778889988887755 455543
No 166
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=97.92 E-value=2.3e-05 Score=64.69 Aligned_cols=87 Identities=14% Similarity=0.069 Sum_probs=62.9
Q ss_pred cCCeEEEEeecCCCcc-chhhhhccCCCHHHHHHhhc-------cEEEEEecCCC----hhH------------------
Q 021955 135 QDKWLLVNLQSTKEFS-SLMLNRDTWGNEAVSQIISV-------NFIFWQEYDDT----SEG------------------ 184 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~-c~~lnRDvw~n~~V~~~i~~-------nFIfwq~~~ds----~eg------------------ 184 (305)
.+||+||++..+||.+ |...- +.+.++.++ ++.++.++.|. ++.
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~------~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~ 107 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTL------LALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGS 107 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHH------HHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCC
T ss_pred CCCEEEEEEECCCCcchhHHHH------HHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCC
Confidence 5899999999999998 98773 444444432 57777777652 221
Q ss_pred ----HHHHHhcC---------------CCCCceEEEEeCCCCeeEEEecCCC--ChHHHHHHHHHH
Q 021955 185 ----WKVCSFYN---------------MDSIPAVLVIDPITGQKICSWCGMI--NPQPLGEMLLPF 229 (305)
Q Consensus 185 ----~~~~~~Y~---------------~~~~P~i~IIdprTGe~~~~~~G~~--~~~~~l~~L~~f 229 (305)
..+++.|+ +..+|++.||| .|+.+..+.|.. +++++++.|...
T Consensus 108 ~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid--~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 108 PEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK--EGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE--TTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE--CCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 34444444 34679999999 699999998877 888888877653
No 167
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=97.92 E-value=2.4e-05 Score=66.18 Aligned_cols=90 Identities=11% Similarity=0.009 Sum_probs=59.8
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCC--------Ch-hHHHHHHhcC-------------
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDD--------TS-EGWKVCSFYN------------- 192 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~d--------s~-eg~~~~~~Y~------------- 192 (305)
.+||+||++..+||..|...-..+ .+...+|-..++.++.++.| ++ +..++++.|+
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l--~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 123 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQL--VDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNG 123 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHH--HHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSS
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHH--HHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCC
Confidence 489999999999999997764332 22223333345777777654 21 2333433331
Q ss_pred -----------------------CCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHH
Q 021955 193 -----------------------MDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLL 227 (305)
Q Consensus 193 -----------------------~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~ 227 (305)
+..+|++.|||+ .|+.+..+.|..+++++.+.|.
T Consensus 124 ~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~i~ 180 (183)
T 2obi_A 124 DDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDK-NGCVVKRYGPMEEPLVIEKDLP 180 (183)
T ss_dssp TTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECT-TSCEEEEECTTSCTHHHHTTSG
T ss_pred cchhHHHHHhhccCCCCCcccccccccceEEEECC-CCCEEEEeCCCCCHHHHHHHHH
Confidence 223599999996 6999999999888887765554
No 168
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.91 E-value=4.9e-05 Score=72.05 Aligned_cols=101 Identities=13% Similarity=0.091 Sum_probs=75.4
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccC----CCHHHHHHhhc-cEEEEEecCCChhHHHHHHhcCCCC
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTW----GNEAVSQIISV-NFIFWQEYDDTSEGWKVCSFYNMDS 195 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw----~n~~V~~~i~~-nFIfwq~~~ds~eg~~~~~~Y~~~~ 195 (305)
-..+|++++ +.++++||+++++||..| .+++.+- .-+.+.+.++. ++.|..++.+. ...+++.|++..
T Consensus 19 t~~~f~~~i----~~~~~vlV~FyApWC~~~-~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~--~~~l~~~~~V~~ 91 (367)
T 3us3_A 19 NAKNYKNVF----KKYEVLALLYHEPPEDDK-ASQRQFEMEELILELAAQVLEDKGVGFGLVDSEK--DAAVAKKLGLTE 91 (367)
T ss_dssp CTTTHHHHH----HHCSEEEEEEECCCCSSH-HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTT--THHHHHHHTCCS
T ss_pred CHHHHHHHH----hhCCeEEEEEECCCchhH-HHhhhhccccHHHHHHHHHhhcCCceEEEEeCcc--cHHHHHHcCCCc
Confidence 456788877 348999999999999886 5554210 01344555554 58899987774 457999999999
Q ss_pred CceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 196 IPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 196 ~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
||+|.++. .|+. ..+.|..+++.+++-|.+.+.
T Consensus 92 ~PTl~~f~--~G~~-~~y~G~~~~~~i~~~i~~~~~ 124 (367)
T 3us3_A 92 EDSIYVFK--EDEV-IEYDGEFSADTLVEFLLDVLE 124 (367)
T ss_dssp TTEEEEEE--TTEE-EECCSCCSHHHHHHHHHHHHS
T ss_pred CceEEEEE--CCcE-EEeCCCCCHHHHHHHHHHhcC
Confidence 99999997 4765 478999999988887777654
No 169
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.89 E-value=4.7e-05 Score=66.44 Aligned_cols=86 Identities=5% Similarity=0.005 Sum_probs=67.0
Q ss_pred HcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEE
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKIC 211 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~ 211 (305)
..+++++|++.++||..|+.+. +.+.++.++ ++.|..++.+ +...+++.|++..+|++.| .|+ +.
T Consensus 134 ~~~~~~~v~F~a~wC~~C~~~~------~~~~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~----~G~-~~ 200 (229)
T 2ywm_A 134 VDIPIEIWVFVTTSCGYCPSAA------VMAWDFALANDYITSKVIDAS--ENQDLAEQFQVVGVPKIVI----NKG-VA 200 (229)
T ss_dssp CCSCEEEEEEECTTCTTHHHHH------HHHHHHHHHCTTEEEEEEEGG--GCHHHHHHTTCCSSSEEEE----GGG-TE
T ss_pred cCCCeEEEEEECCCCcchHHHH------HHHHHHHHHCCCeEEEEEECC--CCHHHHHHcCCcccCEEEE----CCE-EE
Confidence 3456669999999999999995 444554443 5788877655 3456899999999999998 477 56
Q ss_pred EecCCCChHHHHHHHHHHHhh
Q 021955 212 SWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 212 ~~~G~~~~~~~l~~L~~fl~~ 232 (305)
.+.|..+.+++.+.|.+.+..
T Consensus 201 ~~~G~~~~~~l~~~l~~~~~~ 221 (229)
T 2ywm_A 201 EFVGAQPENAFLGYIMAVYEK 221 (229)
T ss_dssp EEESCCCHHHHHHHHHHHHHH
T ss_pred EeeCCCCHHHHHHHHHHHhhh
Confidence 688999999998888887753
No 170
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=97.88 E-value=7e-05 Score=63.18 Aligned_cols=95 Identities=13% Similarity=0.049 Sum_probs=67.7
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCC--------C-hhHHHHHHh-cCCC----------
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDD--------T-SEGWKVCSF-YNMD---------- 194 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~d--------s-~eg~~~~~~-Y~~~---------- 194 (305)
.+|++||++..+||.+|...-..+ .....+|=..++.++.+..+ + .+-.++++. |++.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l--~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~ 114 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGL--KELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKIL 114 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHH--HHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCS
T ss_pred CCCEEEEEEEecCCCCcHHHHHHH--HHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeecc
Confidence 589999999999999999864332 22223333345888888754 2 244566666 5431
Q ss_pred ----------------CCce----EEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 195 ----------------SIPA----VLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 195 ----------------~~P~----i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
.+|. ..|||+ .|+.+..+.|..+++++.+.|.+.|++
T Consensus 115 ~~~~~~~~~~~~~~~~~~p~~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~lL~~ 171 (180)
T 3kij_A 115 GSEGEPAFRFLVDSSKKEPRWNFWKYLVNP-EGQVVKFWRPEEPIEVIRPDIAALVRQ 171 (180)
T ss_dssp STTCCHHHHHHHHHHTCCCSSTTCEEEECT-TSCEEEEECTTCCGGGTHHHHHHHHHH
T ss_pred CccccHHHHHHHhcCCCCccccceEEEECC-CCCEEEEECCCCCHHHHHHHHHHHHHH
Confidence 2566 899997 699999999999998888888877764
No 171
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=97.88 E-value=4.1e-05 Score=65.31 Aligned_cols=93 Identities=12% Similarity=0.089 Sum_probs=68.0
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChh--------------------------HHHH
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE--------------------------GWKV 187 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~e--------------------------g~~~ 187 (305)
.+||+||++. .+||..|...-..+ .....+|-..++.++.++.|+++ ...+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l--~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 107 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIAL--DKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSI 107 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHH--HHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHH--HHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHH
Confidence 5799999999 99999998764433 22233343457888888887643 2357
Q ss_pred HHhcCCC-----CCceEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHH
Q 021955 188 CSFYNMD-----SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFM 230 (305)
Q Consensus 188 ~~~Y~~~-----~~P~i~IIdprTGe~~~~~~G~~----~~~~~l~~L~~fl 230 (305)
++.|++. .+|++.|||+ .|+.+..+.|.. +.++++..|....
T Consensus 108 ~~~~gv~~~~g~~~P~~~liD~-~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 108 ARSYDVLFNESVALRAFVLIDK-QGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HHHTTCEETTTEECCEEEEECT-TSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HHHhCCcCcCCceeeEEEEEcC-CCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 7788887 8999999997 699888877642 4677777777665
No 172
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=97.87 E-value=3.5e-05 Score=66.46 Aligned_cols=93 Identities=12% Similarity=0.107 Sum_probs=68.3
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChh--------------------------HHHH
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE--------------------------GWKV 187 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~e--------------------------g~~~ 187 (305)
.+||+||++. .+||+.|...-..+ ++...+|-..++.++.++.|+.+ ...+
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l--~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~ 112 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQF--SDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCI 112 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHH--HHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHH--HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHH
Confidence 4799999999 99999998775433 22333343457888888887642 2356
Q ss_pred HHhcCCC------CCceEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHH
Q 021955 188 CSFYNMD------SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFM 230 (305)
Q Consensus 188 ~~~Y~~~------~~P~i~IIdprTGe~~~~~~G~~----~~~~~l~~L~~fl 230 (305)
++.|.+. .+|++.|||+ .|+.+..+.|.. +.+++++.|....
T Consensus 113 ~~~ygv~~~~~g~~~P~~~lid~-~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 113 MKSYGVLKEEDGVAYRGLFIIDP-KQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHHHTCEETTTTEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHcCCccCCCCceeeEEEEECC-CCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 6778887 8999999997 699888877643 4588888777765
No 173
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=97.87 E-value=4.7e-05 Score=67.05 Aligned_cols=95 Identities=14% Similarity=0.068 Sum_probs=70.1
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChh--------------------------HHHH
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE--------------------------GWKV 187 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~e--------------------------g~~~ 187 (305)
.+||+||++. .+||+.|...-..+ .....+|-..++.++.++.|+.+ ...+
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l--~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i 132 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAF--SDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQI 132 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHH--HHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHH--HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHH
Confidence 4799999999 99999999764433 23333444457888888887642 2356
Q ss_pred HHhcCCC------CCceEEEEeCCCCeeEEEecCC----CChHHHHHHHHHHHhh
Q 021955 188 CSFYNMD------SIPAVLVIDPITGQKICSWCGM----INPQPLGEMLLPFMDR 232 (305)
Q Consensus 188 ~~~Y~~~------~~P~i~IIdprTGe~~~~~~G~----~~~~~~l~~L~~fl~~ 232 (305)
++.|.+. .+|++.|||+ .|+.+..+.|. .+.+++++.|......
T Consensus 133 ~~~ygv~~~~~g~~~P~~~liD~-~G~I~~~~~g~~~~~~~~~ell~~l~~l~~~ 186 (220)
T 1zye_A 133 SRDYGVLLEGPGLALRGLFIIDP-NGVIKHLSVNDLPVGRSVEETLRLVKAFQFV 186 (220)
T ss_dssp HHHTTCEETTTTEECEEEEEECT-TSBEEEEEEECTTCCCCHHHHHHHHHHHHHT
T ss_pred HHHhCCeecCCCcccceEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHhhhh
Confidence 7788887 8999999997 69988887765 3568888888876643
No 174
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=97.84 E-value=0.00011 Score=59.38 Aligned_cols=88 Identities=14% Similarity=0.070 Sum_probs=69.3
Q ss_pred HcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc---cEEEEEecCCChhHHHHHHhcCCCC--CceEEEEeCCCCe
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEGWKVCSFYNMDS--IPAVLVIDPITGQ 208 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~---nFIfwq~~~ds~eg~~~~~~Y~~~~--~P~i~IIdprTGe 208 (305)
...++++|++.++ |.+|+++ .+.+.++.++ .+.|..+|.+ +..++++.|++.+ .|+++|++...|+
T Consensus 21 ~~~~pv~v~f~a~-~~~c~~~------~p~l~~~A~~~~gk~~f~~vd~d--~~~~~a~~~gi~~~~iPtl~i~~~~~g~ 91 (133)
T 2djk_A 21 SAGIPLAYIFAET-AEERKEL------SDKLKPIAEAQRGVINFGTIDAK--AFGAHAGNLNLKTDKFPAFAIQEVAKNQ 91 (133)
T ss_dssp HTTSCEEEEECSC-SSSHHHH------HHHHHHHHHSSTTTSEEEEECTT--TTGGGTTTTTCCSSSSSEEEEECTTTCC
T ss_pred cCCCCEEEEEecC-hhhHHHH------HHHHHHHHHHhCCeEEEEEEchH--HhHHHHHHcCCCcccCCEEEEEecCcCc
Confidence 5678999999998 8899987 4566666554 4888888776 4456899999988 9999999853466
Q ss_pred eEEEec--CCCChHHHHHHHHHHHh
Q 021955 209 KICSWC--GMINPQPLGEMLLPFMD 231 (305)
Q Consensus 209 ~~~~~~--G~~~~~~~l~~L~~fl~ 231 (305)
.. ... |.++.+.+.+.|..+++
T Consensus 92 ~~-~~~~~g~~~~~~l~~fi~~~l~ 115 (133)
T 2djk_A 92 KF-PFDQEKEITFEAIKAFVDDFVA 115 (133)
T ss_dssp BC-CCCSSSCCCHHHHHHHHHHHHH
T ss_pred cc-CCCCccccCHHHHHHHHHHHHc
Confidence 63 554 99999998888888886
No 175
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.82 E-value=0.00011 Score=63.77 Aligned_cols=90 Identities=17% Similarity=0.225 Sum_probs=69.7
Q ss_pred HcCCeEEEEeecC-CCccchhhhhccCCCHHHHHHh--hccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeE
Q 021955 134 AQDKWLLVNLQST-KEFSSLMLNRDTWGNEAVSQII--SVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKI 210 (305)
Q Consensus 134 ~~~KwLLVniq~~-~~f~c~~lnRDvw~n~~V~~~i--~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~ 210 (305)
.+++.+||+++++ ||..|+.+.. .+.++. ..++.|..++.+.++...++..|++..+|++.|+. .|+..
T Consensus 20 ~~~~v~lv~f~~~~~C~~C~~~~~------~~~~la~~~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~--~g~~~ 91 (226)
T 1a8l_A 20 MVNPVKLIVFVRKDHCQYCDQLKQ------LVQELSELTDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQ--DGKDF 91 (226)
T ss_dssp CCSCEEEEEEECSSSCTTHHHHHH------HHHHHHTTCTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEE--TTBCC
T ss_pred cCCCeEEEEEecCCCCchhHHHHH------HHHHHHhhCCceEEEEEeCCCcccHHHHHHcCCCcCceEEEEc--CCcee
Confidence 3457778999999 9999999943 333333 35688999999988889999999999999999995 36554
Q ss_pred -EEecCCCChHHHHHHHHHHHh
Q 021955 211 -CSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 211 -~~~~G~~~~~~~l~~L~~fl~ 231 (305)
..+.|....+++...+...++
T Consensus 92 ~~~~~G~~~~~~l~~~l~~~l~ 113 (226)
T 1a8l_A 92 GVRYFGLPAGHEFAAFLEDIVD 113 (226)
T ss_dssp SEEEESCCCTTHHHHHHHHHHH
T ss_pred eEEEeccCcHHHHHHHHHHHHh
Confidence 567888777777766666654
No 176
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=97.81 E-value=4e-05 Score=65.40 Aligned_cols=85 Identities=13% Similarity=-0.033 Sum_probs=61.5
Q ss_pred HcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHHHhcC---CCCCceEEEEeCCCCe
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYN---MDSIPAVLVIDPITGQ 208 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~~~Y~---~~~~P~i~IIdprTGe 208 (305)
..+|+++|++..+||.+|+.+ .|.+.++..+ ++.|..++.| +...++..|. +.++|+++|++. .|+
T Consensus 52 ~~~k~vvv~F~A~WC~pC~~~------~P~l~~l~~~~~~v~~~~v~~d--~~~~~~~~~~~~~v~~iPt~i~~~~-~G~ 122 (167)
T 1z6n_A 52 IERRYRLLVAGEMWCPDCQIN------LAALDFAQRLQPNIELAIISKG--RAEDDLRQRLALERIAIPLVLVLDE-EFN 122 (167)
T ss_dssp CCSCEEEEEECCTTCHHHHHH------HHHHHHHHHHCTTEEEEEECHH--HHHHHTTTTTTCSSCCSSEEEEECT-TCC
T ss_pred hCCCEEEEEEECCCChhHHHH------HHHHHHHHHHCCCcEEEEEECC--CCHHHHHHHHHcCCCCcCeEEEECC-CCC
Confidence 357999999999999999998 4666665543 5677766554 5566777786 899999999996 578
Q ss_pred eEEEecCCCChHHHHHHHHHH
Q 021955 209 KICSWCGMINPQPLGEMLLPF 229 (305)
Q Consensus 209 ~~~~~~G~~~~~~~l~~L~~f 229 (305)
.+..|.| .|......+.++
T Consensus 123 ~~~~~g~--~p~~~~~~i~~~ 141 (167)
T 1z6n_A 123 LLGRFVE--RPQAVLDGGPQA 141 (167)
T ss_dssp EEEEEES--SCHHHHHHCHHH
T ss_pred EEEEEcC--CCHHHHHhHHHH
Confidence 8777744 334444444443
No 177
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=97.80 E-value=3e-05 Score=66.55 Aligned_cols=93 Identities=9% Similarity=0.031 Sum_probs=67.4
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChh--------------------------HHHH
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE--------------------------GWKV 187 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~e--------------------------g~~~ 187 (305)
.+||+||++. .+||..|...-..+ .....+|-..++.++.++.|+.+ ...+
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l--~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~ 110 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAF--SNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRL 110 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHH--HHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHH--HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHH
Confidence 4799999999 99999998875433 22223333357888888887643 2356
Q ss_pred HHhcCCC------CCceEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHH
Q 021955 188 CSFYNMD------SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFM 230 (305)
Q Consensus 188 ~~~Y~~~------~~P~i~IIdprTGe~~~~~~G~~----~~~~~l~~L~~fl 230 (305)
++.|++. .+|++.|||+ .|+.+..+.|.. +.++++..|....
T Consensus 111 ~~~~gv~~~~~~~~~P~~~lid~-~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 111 SEDYGVLKTDEGIAYRGLFIIDG-KGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HHHTTCEETTTTEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHcCCccCCCCceeeEEEEECC-CCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 7778876 7999999997 699888887754 4677777766654
No 178
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=97.80 E-value=2.8e-05 Score=65.83 Aligned_cols=92 Identities=10% Similarity=0.049 Sum_probs=63.5
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCC--------Ch-hHHHHHHh-cC------------
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDD--------TS-EGWKVCSF-YN------------ 192 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~d--------s~-eg~~~~~~-Y~------------ 192 (305)
.+||+||++..+||..|...-..+ ++...+|-+.++.++.++.+ +. +-.++++. |+
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l--~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~ 125 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRAL--QQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVT 125 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHH--HHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCS
T ss_pred CCCEEEEEEeccCCCCcHHHHHHH--HHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccC
Confidence 489999999999999998764332 22233333345888888765 22 23345554 32
Q ss_pred -----------CCCCc-------eEEEEeCCCCeeEEEecCCCChHHHHHHHHHH
Q 021955 193 -----------MDSIP-------AVLVIDPITGQKICSWCGMINPQPLGEMLLPF 229 (305)
Q Consensus 193 -----------~~~~P-------~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~f 229 (305)
+..+| ++.|||+ .|+.+..+.|..+++++.+.|.+.
T Consensus 126 g~~~~~~~~~~~~~~P~~~~~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~l 179 (181)
T 2p31_A 126 GTGAHPAFKYLAQTSGKEPTWNFWKYLVAP-DGKVVGAWDPTVSVEEVRPQITAL 179 (181)
T ss_dssp STTSCHHHHHHHHHHSCCCCSTTCEEEECT-TSCEEEEECTTSCHHHHHHHHHTT
T ss_pred CccchhhhhhhhhcCCCccccceeEEEEcC-CCCEEEEeCCCCCHHHHHHHHHHH
Confidence 23457 8999997 699999999988998887777654
No 179
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=97.79 E-value=6.3e-05 Score=65.90 Aligned_cols=99 Identities=10% Similarity=0.072 Sum_probs=70.6
Q ss_pred cCCe-EEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCCh---------------------------hHHH
Q 021955 135 QDKW-LLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTS---------------------------EGWK 186 (305)
Q Consensus 135 ~~Kw-LLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~---------------------------eg~~ 186 (305)
.+|+ +||++..+||..|...-..+ .+...+|-..++.|+.++.+.+ ....
T Consensus 57 ~gk~~vll~F~a~~C~~C~~~~~~l--~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~ 134 (218)
T 3u5r_E 57 KDSPALLVAFISNRCPFVVLIREAL--AKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQS 134 (218)
T ss_dssp TTCSEEEEEECCSSCHHHHTTHHHH--HHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCH
T ss_pred CCCCeEEEEEECCCCccHHHHHHHH--HHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccH
Confidence 3786 99999999999998875443 2222333334588888887522 1346
Q ss_pred HHHhcCCCCCceEEEEeCCCCeeEEEec---------CCCChHHHHHHHHHHHhhCCCC
Q 021955 187 VCSFYNMDSIPAVLVIDPITGQKICSWC---------GMINPQPLGEMLLPFMDRSPRK 236 (305)
Q Consensus 187 ~~~~Y~~~~~P~i~IIdprTGe~~~~~~---------G~~~~~~~l~~L~~fl~~~~~~ 236 (305)
+++.|.+..+|++.|||+ .|+.+..+. |..+.+++.+.|...+...+..
T Consensus 135 ~~~~~~v~~~P~~~liD~-~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~~~ 192 (218)
T 3u5r_E 135 VAKAYGAACTPDFFLYDR-ERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKGKDVG 192 (218)
T ss_dssp HHHHHTCCEESEEEEECT-TCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCCCC
T ss_pred HHHHcCCCCCCeEEEECC-CCcEEEeccccccccccccccCHHHHHHHHHHHHcCCCCC
Confidence 788899999999999997 688775531 2346788888998888766554
No 180
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=97.79 E-value=6.6e-05 Score=65.88 Aligned_cols=93 Identities=14% Similarity=0.078 Sum_probs=68.6
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhH--------------------------HHH
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG--------------------------WKV 187 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg--------------------------~~~ 187 (305)
.+||+||++. .+||+.|...-..+ .+...+|-..++.++.++.|+++. ..+
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l--~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 128 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIAL--DKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSI 128 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHH--HHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHH--HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHH
Confidence 5799999999 99999998875443 233334444678888888776432 346
Q ss_pred HHhcCCC-----CCceEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHH
Q 021955 188 CSFYNMD-----SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFM 230 (305)
Q Consensus 188 ~~~Y~~~-----~~P~i~IIdprTGe~~~~~~G~~----~~~~~l~~L~~fl 230 (305)
++.|.+. .+|++.|||+ .|+.+..+.|.. +.+++++.|....
T Consensus 129 ~~~ygv~~~~g~~~p~~~lID~-~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 129 SKDYNVLFDDSVSLRAFVLIDM-NGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HHHTTCEETTTEECEEEEEECT-TSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHhCCccccCCcccEEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 6777777 7999999997 699888876643 4788888887765
No 181
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.78 E-value=0.00013 Score=63.02 Aligned_cols=97 Identities=11% Similarity=0.040 Sum_probs=65.9
Q ss_pred cCCeEEEEeecCCCcc-chhhhhccCCCHHHHHHhh---ccEEEEEecCC----Ch----------------------hH
Q 021955 135 QDKWLLVNLQSTKEFS-SLMLNRDTWGNEAVSQIIS---VNFIFWQEYDD----TS----------------------EG 184 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~-c~~lnRDvw~n~~V~~~i~---~nFIfwq~~~d----s~----------------------eg 184 (305)
.+||+||++..+||.+ |...-..+ .+...++-. .++.++.++.| ++ +.
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l--~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~ 117 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKL--GLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEV 117 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHH--HHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHH--HHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHH
Confidence 4899999999999998 98763222 111111221 25666666655 22 12
Q ss_pred HHHHHhcCCC-CC---------------ceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021955 185 WKVCSFYNMD-SI---------------PAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (305)
Q Consensus 185 ~~~~~~Y~~~-~~---------------P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~~ 234 (305)
..+++.|++. .. |++.|||+ .|+.+..+.|..+++++.+.|...|+...
T Consensus 118 ~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~-~G~i~~~~~g~~~~~~~~~~i~~~l~~l~ 182 (200)
T 2b7k_A 118 KNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDP-EGQFVDALGRNYDEKTGVDKIVEHVKSYV 182 (200)
T ss_dssp HHHHHHTTC--------------CTTTCCCEEEECT-TSCEEEEECTTCCTTHHHHHHHHHHHHCC
T ss_pred HHHHHHcCcEEeeccccCCCCCceeeecceEEEECC-CCcEEEEeCCCCCHHHHHHHHHHHHHHhh
Confidence 3566777764 33 37899997 69999999998899999999999998643
No 182
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=97.78 E-value=5.1e-05 Score=64.43 Aligned_cols=92 Identities=11% Similarity=0.023 Sum_probs=61.2
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCC--------h-hHHHHHHhcCC------------
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT--------S-EGWKVCSFYNM------------ 193 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds--------~-eg~~~~~~Y~~------------ 193 (305)
.+||+||++..+||..|...-..+ ++...+|-..++.++.++.|. + +..++++.|++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l--~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 125 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQL--VDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNG 125 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHH--HHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCSEEBCCCBSSS
T ss_pred CCCEEEEEEecCCCCchHHHHHHH--HHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCCeeeeeeccCC
Confidence 479999999999999997653322 222223333457777776542 1 23344443322
Q ss_pred ------------------------CCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHH
Q 021955 194 ------------------------DSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPF 229 (305)
Q Consensus 194 ------------------------~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~f 229 (305)
..+|++.|||+ .|+.+..+.|..+++++.+.|.+.
T Consensus 126 ~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 126 DDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDK-NGCVVKRYGPMEEPLVIEKDLPHY 184 (185)
T ss_dssp TTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECT-TSCEEEEECTTSCGGGGGGGHHHH
T ss_pred hhhhHHHHHHHhhcccccccCCcccccceEEEECC-CCCEEEeeCCCCCHHHHHHHHHHh
Confidence 12489999997 699999999988888877776654
No 183
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=97.71 E-value=0.00015 Score=63.43 Aligned_cols=94 Identities=9% Similarity=0.033 Sum_probs=64.1
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCC--------C-hhHHHHHH------hcCC------
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDD--------T-SEGWKVCS------FYNM------ 193 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~d--------s-~eg~~~~~------~Y~~------ 193 (305)
.+|++|||+..+||.+|...-..+ ++...+|=..++.++.++.+ + .+-.+|++ .|.+
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l--~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~~i~~f~~~~~~~~~~~~~fp~l~ 123 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQM--NELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFE 123 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHH--HHHHHHHGGGTEEEEEEECCCSTTTTCSCHHHHHHHHHHTSSCTTCCCSSEEBC
T ss_pred CCCEEEEEEECCCCccHHHHHHHH--HHHHHHccCCCeEEEEEECCcccccCCCCHHHHHHHHHhcccccccccceEEEE
Confidence 589999999999999998742222 22222333345888877764 1 22334554 3321
Q ss_pred -----------------------------------------------CCCceEEEEeCCCCeeEEEecCCCChHHHHHHH
Q 021955 194 -----------------------------------------------DSIPAVLVIDPITGQKICSWCGMINPQPLGEML 226 (305)
Q Consensus 194 -----------------------------------------------~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L 226 (305)
...|+..|||+ .|+.+..|.|..+++++.+.|
T Consensus 124 d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~-~G~i~~~~~g~~~~~~l~~~I 202 (208)
T 2f8a_A 124 KCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGP-DGVPLRRYSRRFQTIDIEPDI 202 (208)
T ss_dssp CCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECT-TSCEEEEECTTSCGGGGHHHH
T ss_pred EeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcC-CCcEEEEeCCCCCHHHHHHHH
Confidence 22388999996 799999999999999888888
Q ss_pred HHHHh
Q 021955 227 LPFMD 231 (305)
Q Consensus 227 ~~fl~ 231 (305)
...|.
T Consensus 203 ~~ll~ 207 (208)
T 2f8a_A 203 EALLS 207 (208)
T ss_dssp HHHHC
T ss_pred HHHhh
Confidence 77664
No 184
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=97.69 E-value=3.1e-05 Score=79.98 Aligned_cols=98 Identities=13% Similarity=0.174 Sum_probs=67.7
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEE
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~I 201 (305)
..+|++++ +.++.+||+++++||..|+.|...+ +.+.+-+...+.|..++.+.. ..+++.|++..||++.+
T Consensus 123 ~~~f~~~i----~~~~~~lv~Fya~wC~~C~~~~p~~---~~~a~~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~ 193 (780)
T 3apo_A 123 RREFDAAV----NSGELWFVNFYSPGSSHSHDLAPTW---REFAKEVDGLLRIGAVNCGDD--RMLCRMKGVNSYPSLFI 193 (780)
T ss_dssp HHHHHHHH----TSSSCEEEEEECSSCHHHHHHHHHH---HHHHHHTTTTSEEEEEETTTC--SSCC--------CEEEE
T ss_pred hHhHHhhh----cCCCcEEEEEeCCCCcchhHhhHHH---HHHHHHhcCceEEEEEeCCCc--HHHHHHcCCceeeeEEE
Confidence 34566666 7799999999999999999996543 445555566788888877654 57899999999999998
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021955 202 IDPITGQKICSWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 202 IdprTGe~~~~~~G~~~~~~~l~~L~~fl 230 (305)
+. .|+.+..+.|..+.+.+++.|.+.+
T Consensus 194 ~~--~g~~~~~~~G~~~~~~l~~~l~~~~ 220 (780)
T 3apo_A 194 FR--SGMAAVKYNGDRSKESLVAFAMQHV 220 (780)
T ss_dssp EC--TTSCCEECCSCSCHHHHHHHHHTTS
T ss_pred Ee--CCcEeeEecCCCCHHHHHHHHHHhc
Confidence 84 5887888899888877666554433
No 185
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=96.85 E-value=5.8e-06 Score=67.84 Aligned_cols=95 Identities=9% Similarity=0.006 Sum_probs=60.1
Q ss_pred HHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHh-hccEEEEEecCCCh--hHHHHHH----------------
Q 021955 129 KDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII-SVNFIFWQEYDDTS--EGWKVCS---------------- 189 (305)
Q Consensus 129 ~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i-~~nFIfwq~~~ds~--eg~~~~~---------------- 189 (305)
...+.-++|++||++..+||..|+.+-..+ ......++- +.++.++.++.+.. ...++.+
T Consensus 26 ~~l~~~~gk~vll~f~a~~C~~C~~~~~~l-~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~ 104 (159)
T 2ls5_A 26 VTLSSLRGKVVMLQFTASWCGVCRKEMPFI-EKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADI 104 (159)
Confidence 333444689999999999999998875443 111222233 45677777776643 2334443
Q ss_pred --hcC--CCCCceEEEEeCCCCeeEEEecCCCChHHHHHHH
Q 021955 190 --FYN--MDSIPAVLVIDPITGQKICSWCGMINPQPLGEML 226 (305)
Q Consensus 190 --~Y~--~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L 226 (305)
.|+ +..+|++.|||+ .|+.+..+.|. ++.++.+.|
T Consensus 105 ~~~~~~~~~~~P~~~lid~-~G~i~~~~~g~-~~~~l~~~l 143 (159)
T 2ls5_A 105 FAKYALRDAGITRNVLIDR-EGKIVKLTRLY-NEEEFASLV 143 (159)
Confidence 333 355999999997 69988888773 444443333
No 186
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=97.67 E-value=4.8e-05 Score=74.53 Aligned_cols=98 Identities=11% Similarity=0.097 Sum_probs=71.3
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh---ccEEEEEecCCChhHHHHHHhcCCCCCce
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS---VNFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~---~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~ 198 (305)
..+|++.. ...+|.+||+++++||..|+.|...+ ..+.+-+. .+++|..++.+..+ ... |++..||+
T Consensus 365 ~~~f~~~v---~~~~k~vlv~F~a~wC~~C~~~~p~~---~~l~~~~~~~~~~v~~~~vd~~~~~---~~~-~~v~~~Pt 434 (504)
T 2b5e_A 365 GKNHDEIV---NDPKKDVLVLYYAPWCGHCKRLAPTY---QELADTYANATSDVLIAKLDHTEND---VRG-VVIEGYPT 434 (504)
T ss_dssp TTTHHHHH---HCTTCCEEEEEECTTCHHHHHHHHHH---HHHHHHHHHHCSSCEEEEEEGGGCC---CSS-CCCSSSSE
T ss_pred cccHHHhh---ccCCCCEEEEEECCCChhHHHHhHHH---HHHHHHhhccCCcEEEEEecCCccc---ccc-CCceecCe
Confidence 44566654 45789999999999999999996543 23333333 37999999876544 233 99999999
Q ss_pred EEEEeCCCCee--EEEecCCCChHHHHHHHHHHHh
Q 021955 199 VLVIDPITGQK--ICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 199 i~IIdprTGe~--~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
+.++ + .|+. +..+.|..+.+++++.|.+.+.
T Consensus 435 ~~~~-~-~G~~~~~~~~~G~~~~~~l~~~i~~~~~ 467 (504)
T 2b5e_A 435 IVLY-P-GGKKSESVVYQGSRSLDSLFDFIKENGH 467 (504)
T ss_dssp EEEE-C-CTTSCCCCBCCSCCCHHHHHHHHHHHCT
T ss_pred EEEE-e-CCceecceEecCCCCHHHHHHHHHhcCC
Confidence 9999 3 5765 5668898888887777776543
No 187
>1oai_A Nuclear RNA export factor; nuclear transport, nuclear transport factor; 1.0A {Homo sapiens} SCOP: a.5.2.3
Probab=97.65 E-value=7.8e-05 Score=53.40 Aligned_cols=45 Identities=18% Similarity=0.326 Sum_probs=42.0
Q ss_pred CCchhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Q 021955 3 SESIDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAV 48 (305)
Q Consensus 3 ~~s~~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~ 48 (305)
-+|..+.++|..|+.. ||-+.+=+..+|+.++||++.|+..|-..
T Consensus 2 ~ls~~q~~mv~~~s~~-Tgmn~~~s~~cL~~~~Wd~~~A~~~F~~l 46 (59)
T 1oai_A 2 TLSPEQQEMLQAFSTQ-SGMNLEWSQKCLQDNNWDYTRSAQAFTHL 46 (59)
T ss_dssp CCCHHHHHHHHHHHHH-HCCCHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-HCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 3577899999999999 99999999999999999999999999874
No 188
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=97.62 E-value=0.0001 Score=72.93 Aligned_cols=99 Identities=11% Similarity=0.118 Sum_probs=68.4
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc-----------cEEEEEecCCChhHHHHHHhc
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV-----------NFIFWQEYDDTSEGWKVCSFY 191 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~-----------nFIfwq~~~ds~eg~~~~~~Y 191 (305)
.+|++++. +..+|++||+++.+||.+|+.+. +.+.++.++ ++.|..++.+.. ..+++.|
T Consensus 31 ~~F~~~l~--~~~~k~VlV~FyA~WC~pCk~~~------P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~--~~la~~y 100 (470)
T 3qcp_A 31 DDFSRVHR--VAPLCPWIVLFYNDGCGACRRYA------STFSKFAGGLKVEHGKDALQIATAAAVNCASE--VDLCRKY 100 (470)
T ss_dssp SCGGGTCT--TGGGSCEEEEEECTTCHHHHHHH------HHHHHHHHTSCCSSCSSGGGGCEEEEEETTTC--HHHHHHT
T ss_pred HHHHHHHH--hCCCCeEEEEEECCCCHHHHHHH------HHHHHHHHHHhhhcccccCceEEEEEEECCCC--HHHHHHc
Confidence 34444432 34579999999999999999995 444444432 488999987754 6799999
Q ss_pred CCCCCceEEEEeCCCCeeEEEecC------------CCChHHHHHHHHHHHh
Q 021955 192 NMDSIPAVLVIDPITGQKICSWCG------------MINPQPLGEMLLPFMD 231 (305)
Q Consensus 192 ~~~~~P~i~IIdprTGe~~~~~~G------------~~~~~~~l~~L~~fl~ 231 (305)
++..||++.|+++..+.....+.| .++.+++...+...+.
T Consensus 101 ~V~~~PTlilf~~gg~~~~~~y~G~r~~e~L~fI~k~l~~~eLe~~~e~Lin 152 (470)
T 3qcp_A 101 DINFVPRLFFFYPRDSCRSNEECGTSSLEHVAFENSHLEVDELESEVRRLVN 152 (470)
T ss_dssp TCCSSCEEEEEEESSCCCTTSCCCCCCEEEEECSCTTCCHHHHHHHHHHHHH
T ss_pred CCCccCeEEEEECCCceEEEEeeCCCCHHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 999999999998644333322333 3566666666665553
No 189
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.61 E-value=0.00031 Score=60.90 Aligned_cols=89 Identities=8% Similarity=0.060 Sum_probs=64.9
Q ss_pred HHHhhhhCCCccc-cccccHHHHHHHHHHcCCeEEEEeec-------CCCccchhhhhccCCCHHHHHHhh--------c
Q 021955 107 DILASLYRPPFHV-MFNGSFEKAKDAALAQDKWLLVNLQS-------TKEFSSLMLNRDTWGNEAVSQIIS--------V 170 (305)
Q Consensus 107 ~~la~lFrPP~~l-~~~gsf~~A~~~Ak~~~KwLLVniq~-------~~~f~c~~lnRDvw~n~~V~~~i~--------~ 170 (305)
+.|..+-.+...| +-..+|++.+. ...+.++||.+.. .||.+|++|. +.+.++-+ .
T Consensus 9 ~~l~~l~~~~~vi~lt~~nF~~~v~--~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~------P~~e~lA~~~~~~~~~~ 80 (178)
T 3ga4_A 9 DDILQLKDDTGVITVTADNYPLLSR--GVPGYFNILYITMRGTNSNGMSCQLCHDFE------KTYHAVADVIRSQAPQS 80 (178)
T ss_dssp HHHHTTCCTTSEEECCTTTHHHHTT--CCTTCEEEEEEECCSBCTTSCBCHHHHHHH------HHHHHHHHHHHHHCTTC
T ss_pred HHHHHhhccCCCEECCHHHHHHHHc--ccCCCcEEEEEeCCCCCCCCCCChhHHHHH------HHHHHHHHHhhhccCCC
Confidence 4444554444434 34667987543 3457899999999 4999999994 54444443 5
Q ss_pred cEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCC
Q 021955 171 NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPI 205 (305)
Q Consensus 171 nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdpr 205 (305)
+.+|..+|+| ++..+++.|++.++|+|.++-+-
T Consensus 81 ~v~f~kvD~d--~~~~la~~~~I~siPtl~~F~~g 113 (178)
T 3ga4_A 81 LNLFFTVDVN--EVPQLVKDLKLQNVPHLVVYPPA 113 (178)
T ss_dssp CEEEEEEETT--TCHHHHHHTTCCSSCEEEEECCC
T ss_pred CEEEEEEECc--cCHHHHHHcCCCCCCEEEEEcCC
Confidence 6788888776 47889999999999999999874
No 190
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=97.61 E-value=0.0003 Score=58.08 Aligned_cols=93 Identities=8% Similarity=0.006 Sum_probs=60.8
Q ss_pred cCCeEEEEeecCCCc-cchhhhhccCCCHHHHHHhhc---cEEEEEecCC----Chh-HHHHHHh---------------
Q 021955 135 QDKWLLVNLQSTKEF-SSLMLNRDTWGNEAVSQIISV---NFIFWQEYDD----TSE-GWKVCSF--------------- 190 (305)
Q Consensus 135 ~~KwLLVniq~~~~f-~c~~lnRDvw~n~~V~~~i~~---nFIfwq~~~d----s~e-g~~~~~~--------------- 190 (305)
.+||+||++..+||. .|...-..+ ..+.+-+++ ++.++.++.| +++ ..++++.
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l---~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~ 108 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHM---TDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYS 108 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHH---HHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSC
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHH---HHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCC
Confidence 489999999999999 897653222 112222222 2666666654 221 1222221
Q ss_pred ----------------------cCCCCCceEEEEeCCCCeeEEEecCCC--ChHHHHHHHHHHHh
Q 021955 191 ----------------------YNMDSIPAVLVIDPITGQKICSWCGMI--NPQPLGEMLLPFMD 231 (305)
Q Consensus 191 ----------------------Y~~~~~P~i~IIdprTGe~~~~~~G~~--~~~~~l~~L~~fl~ 231 (305)
|.+...|++.|||+ .|+.+..+.|.. +++++++.|...+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~-~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 109 QSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGP-DGKVLKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp HHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECT-TSEEEEEEESSSSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECC-CCeEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 33456899999997 699999999875 57889888887764
No 191
>1z96_A DNA-damage, UBA-domain protein MUD1; ubiquitin, three-helix bundle, protein transport; 1.80A {Schizosaccharomyces pombe} SCOP: a.5.2.1
Probab=97.58 E-value=9.8e-05 Score=48.06 Aligned_cols=38 Identities=24% Similarity=0.369 Sum_probs=34.6
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHH
Q 021955 7 DKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFF 46 (305)
Q Consensus 7 ~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff 46 (305)
+.++.|.+++++ |-+.+.|++.|..++||++.|++.+|
T Consensus 3 ~~~~~i~~L~~m--Gf~~~~a~~AL~~~~~n~e~A~~~L~ 40 (40)
T 1z96_A 3 GLNSKIAQLVSM--GFDPLEAAQALDAANGDLDVAASFLL 40 (40)
T ss_dssp CHHHHHHHHHHT--TCCHHHHHHHHHHTTTCHHHHHHHHC
T ss_pred hHHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHC
Confidence 457799999999 89999999999999999999998764
No 192
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.58 E-value=0.00035 Score=62.51 Aligned_cols=87 Identities=6% Similarity=-0.009 Sum_probs=65.1
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhh----ccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeE
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS----VNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKI 210 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~----~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~ 210 (305)
.++..+|++.++||..|+.+...+ ..+..... .++.+..++.+. ...+++.|++.++|++.| .|+.+
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l---~~la~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~V~~vPt~~i----~G~~~ 207 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLA---HMFAYEAWKQGNPVILSEAVEAYE--NPDIADKYGVMSVPSIAI----NGYLV 207 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHH---HHHHHHHHHTTCCCEEEEEEETTT--CHHHHHHTTCCSSSEEEE----TTEEE
T ss_pred CCCcEEEEEECCCCCCcHHHHHHH---HHHHHHcccccCCcEEEEEEECcc--CHHHHHHcCCeeeCeEEE----CCEEE
Confidence 467889999999999999985332 11222221 468888887654 346788999999999988 47754
Q ss_pred EEecCCCChHHHHHHHHHHHhh
Q 021955 211 CSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 211 ~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
+.|..+.++|++.|.+.+..
T Consensus 208 --~~G~~~~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 208 --FVGVPYEEDFLDYVKSAAEG 227 (243)
T ss_dssp --EESCCCHHHHHHHHHHHHTT
T ss_pred --EeCCCCHHHHHHHHHHHhhc
Confidence 88999999999999888764
No 193
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.57 E-value=0.00012 Score=64.52 Aligned_cols=90 Identities=13% Similarity=0.072 Sum_probs=62.5
Q ss_pred cCCeEEEEeec-CCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhH--------------------------HHH
Q 021955 135 QDKWLLVNLQS-TKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG--------------------------WKV 187 (305)
Q Consensus 135 ~~KwLLVniq~-~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg--------------------------~~~ 187 (305)
.+|++||++.. +||..|...-..+ ++...+|=..++.++.++.|+.+. ..+
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l--~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 145 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAF--SDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEI 145 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHH--HHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHH--HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHH
Confidence 58999999995 9999998865333 222233333468888888887532 135
Q ss_pred HHhcCCC------CCceEEEEeCCCCeeEEEecCCCC----hHHHHHHHH
Q 021955 188 CSFYNMD------SIPAVLVIDPITGQKICSWCGMIN----PQPLGEMLL 227 (305)
Q Consensus 188 ~~~Y~~~------~~P~i~IIdprTGe~~~~~~G~~~----~~~~l~~L~ 227 (305)
+..|.+. .+|++.|||+ .|+.+..+.|... .+++++.|.
T Consensus 146 ~~~ygv~~~~~g~~~P~~~lID~-~G~I~~~~~g~~~~~~~~~~il~~l~ 194 (222)
T 3ztl_A 146 SKAYGVFDEEDGNAFRGLFIIDP-NGILRQITINDKPVGRSVDETLRLLD 194 (222)
T ss_dssp HHHTTCBCTTTSSBCEEEEEECT-TSEEEEEEEECTTBCCCHHHHHHHHH
T ss_pred HHHcCCeecCCCCccceEEEECC-CCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 5667776 7899999997 6999988877543 455555544
No 194
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=97.55 E-value=0.00034 Score=57.76 Aligned_cols=91 Identities=12% Similarity=0.060 Sum_probs=64.5
Q ss_pred cCCeEEEEeecCC-CccchhhhhccCCCHHHHHHhhccEEEEEecCCChh---------------------HHHHHHhcC
Q 021955 135 QDKWLLVNLQSTK-EFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE---------------------GWKVCSFYN 192 (305)
Q Consensus 135 ~~KwLLVniq~~~-~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~e---------------------g~~~~~~Y~ 192 (305)
.+||++|++..+| |..|...-..+ ++...+| .++.++.++.|+++ ...+.+.|.
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l--~~l~~~~--~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 118 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRF--NEEAAKL--GDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFG 118 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHH--HHHHHHH--SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTT
T ss_pred CCCeEEEEEecCCCCCchHHHHHHH--HHHHHHc--CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhC
Confidence 5899999999998 99998774332 2222333 56777777776532 235667787
Q ss_pred CCC------CceEEEEeCCCCeeEEEecCC-----CChHHHHHHHHHHH
Q 021955 193 MDS------IPAVLVIDPITGQKICSWCGM-----INPQPLGEMLLPFM 230 (305)
Q Consensus 193 ~~~------~P~i~IIdprTGe~~~~~~G~-----~~~~~~l~~L~~fl 230 (305)
+.. +|++.|||+ .|+.+..+.|. .+.+++++.|.+.+
T Consensus 119 v~~~~~g~~~p~~~lid~-~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 119 VYIKELRLLARSVFVLDE-NGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp CBBTTTCSBCCEEEEECT-TSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred CccccCCceeeEEEEEcC-CCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 754 499999997 69998888653 24588888887765
No 195
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.54 E-value=0.0003 Score=57.71 Aligned_cols=93 Identities=12% Similarity=0.260 Sum_probs=60.3
Q ss_pred cCCeEEEEeec-CCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHH-------------------HHHHhcCCC
Q 021955 135 QDKWLLVNLQS-TKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGW-------------------KVCSFYNMD 194 (305)
Q Consensus 135 ~~KwLLVniq~-~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~-------------------~~~~~Y~~~ 194 (305)
.+||++|++.. +||..|...-..+ ++...+|-..++.++.+..|+++.. .+++.|++.
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l--~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 111 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDF--NALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVI 111 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHH--HHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHH--HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCc
Confidence 47899999997 8999998764433 2333334445688888888765432 344455554
Q ss_pred C------------CceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 195 S------------IPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 195 ~------------~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
. .|++.|||+ .|+.+..|.|. .+...++.+.+.|+
T Consensus 112 ~~~~~~~~~~~~~~p~~~lid~-~G~i~~~~~~~-~~~~~~~~il~~l~ 158 (163)
T 3gkn_A 112 KEKNMYGKQVLGIERSTFLLSP-EGQVVQAWRKV-KVAGHADAVLAALK 158 (163)
T ss_dssp EEEEETTEEEEEECCEEEEECT-TSCEEEEECSC-CSTTHHHHHHHHHH
T ss_pred cccccccccccCcceEEEEECC-CCeEEEEEcCC-CcccCHHHHHHHHH
Confidence 3 899999997 69998888654 33233344444443
No 196
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=97.49 E-value=0.00013 Score=75.21 Aligned_cols=117 Identities=9% Similarity=0.044 Sum_probs=81.5
Q ss_pred HHhhhhCCCccccccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHH
Q 021955 108 ILASLYRPPFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKV 187 (305)
Q Consensus 108 ~la~lFrPP~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~ 187 (305)
.+-..+.||..+ ..+-+.........+|.+||+++++||.+|+.+...+ +.+.+-.+.++.|..++.+. ...+
T Consensus 649 ~fi~~~~~~~v~--~l~~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~---~~la~~~~~~~~~~~vd~~~--~~~~ 721 (780)
T 3apo_A 649 SWGLGFLPQASI--DLTPQTFNEKVLQGKTHWVVDFYAPWSGPSQNFAPEF---ELLARMIKGKVRAGKVDCQA--YPQT 721 (780)
T ss_dssp HHHHTTSCCCSE--EECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTCEEEEEETTT--CHHH
T ss_pred HHHhhhcccccc--cCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHH---HHHHHHhcCCceEEEEECCC--CHHH
Confidence 333344555422 2233333334456789999999999999999986443 34444455578888887754 4468
Q ss_pred HHhcCCCCCceEEEEeCCCCeeEEEecC----CCChHHHHHHHHHHHhhC
Q 021955 188 CSFYNMDSIPAVLVIDPITGQKICSWCG----MINPQPLGEMLLPFMDRS 233 (305)
Q Consensus 188 ~~~Y~~~~~P~i~IIdprTGe~~~~~~G----~~~~~~~l~~L~~fl~~~ 233 (305)
++.|++..+|+++|+. .|+.+..+.| ..+.+++.+.|.+.+++.
T Consensus 722 ~~~~~v~~~Pt~~~~~--~g~~~~~~~G~~~g~~~~~~l~~~l~~~l~~~ 769 (780)
T 3apo_A 722 CQKAGIKAYPSVKLYQ--YERAKKSIWEEQINSRDAKTIAALIYGKLETL 769 (780)
T ss_dssp HHHTTCCSSSEEEEEE--EETTTTEEEEEEECCCCHHHHHHHHHHHTTC-
T ss_pred HHhcCCCcCCEEEEEc--CCCccccccCcccCCcCHHHHHHHHHHHHHHh
Confidence 8999999999999993 4776655555 578999999888888653
No 197
>1wj7_A Hypothetical protein (RSGI RUH-015); UBA domain, ubiquitin associated domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.5.2.1
Probab=97.45 E-value=0.00015 Score=57.50 Aligned_cols=42 Identities=19% Similarity=0.344 Sum_probs=39.3
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021955 7 DKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (305)
Q Consensus 7 ~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 49 (305)
+.++.|...+++ ||.+++.|+..|..|||||+.||...|+..
T Consensus 38 d~eekVk~L~Em-tG~seeeAr~AL~~~ngDl~~AI~~Lleg~ 79 (104)
T 1wj7_A 38 DFEEKVKQLIDI-TGKNQDECVIALHDCNGDVNRAINVLLEGN 79 (104)
T ss_dssp HHHHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred cHHHHHHHHHHh-hCCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 457899999999 999999999999999999999999999865
No 198
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=96.55 E-value=2.1e-05 Score=62.80 Aligned_cols=75 Identities=19% Similarity=0.166 Sum_probs=53.1
Q ss_pred HcCC-eEEEEeecCCCccchhhhhccCCCHHHHHHh---hccEEEEEecCCChh-----------------------HHH
Q 021955 134 AQDK-WLLVNLQSTKEFSSLMLNRDTWGNEAVSQII---SVNFIFWQEYDDTSE-----------------------GWK 186 (305)
Q Consensus 134 ~~~K-wLLVniq~~~~f~c~~lnRDvw~n~~V~~~i---~~nFIfwq~~~ds~e-----------------------g~~ 186 (305)
-.+| ++||++..+||.+|+.+...+ . .+.+-+ ..++.++.++.+... ...
T Consensus 23 ~~gk~~vll~F~a~wC~~C~~~~~~l--~-~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (143)
T 2lus_A 23 LKDKDIIGFYFSAHWCPPCRGFTPIL--A-DMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASN 99 (143)
Confidence 3567 999999999999999886543 1 122222 235666666665432 246
Q ss_pred HHHhcCCCCCceEEEEeCCCCeeEEE
Q 021955 187 VCSFYNMDSIPAVLVIDPITGQKICS 212 (305)
Q Consensus 187 ~~~~Y~~~~~P~i~IIdprTGe~~~~ 212 (305)
+++.|++..+|++.|||+ .|+.+..
T Consensus 100 ~~~~~~v~~~P~~~lid~-~G~i~~~ 124 (143)
T 2lus_A 100 VTAKYGITGIPALVIVKK-DGTLISM 124 (143)
Confidence 788899999999999997 5887765
No 199
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.41 E-value=0.00039 Score=63.08 Aligned_cols=93 Identities=10% Similarity=0.013 Sum_probs=67.7
Q ss_pred cCCeE-EEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChh-------------------------HHHHH
Q 021955 135 QDKWL-LVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE-------------------------GWKVC 188 (305)
Q Consensus 135 ~~KwL-LVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~e-------------------------g~~~~ 188 (305)
.+||+ |+++..+||+.|...-..+ +....+|-+.++.++.++.|+.+ ...++
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l--~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia 109 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSF--ARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVA 109 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHH--HHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHH
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHH--HHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHH
Confidence 58985 5577899999998764333 23334454568889999888753 23567
Q ss_pred HhcCCC-------CCceEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHH
Q 021955 189 SFYNMD-------SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFM 230 (305)
Q Consensus 189 ~~Y~~~-------~~P~i~IIdprTGe~~~~~~G~~----~~~~~l~~L~~fl 230 (305)
+.|.+. .+|.+.|||| .|..+..+.|.. +.++++..|....
T Consensus 110 ~~ygv~~~~~g~~~~p~~fIID~-dG~I~~~~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 110 RRLGLLHAESATHTVRGVFIVDA-RGVIRTMLYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp HHHTCCCTTCSSSCCEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHhCCccccCCCcccceEEEECC-CCeEEEEEecCCcccchhHHHHHHHHHHH
Confidence 788875 8999999998 698887776643 6788888887765
No 200
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.38 E-value=0.00074 Score=56.61 Aligned_cols=96 Identities=11% Similarity=0.060 Sum_probs=65.3
Q ss_pred HcCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHH-HH------------------HHhcCC
Q 021955 134 AQDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGW-KV------------------CSFYNM 193 (305)
Q Consensus 134 ~~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~-~~------------------~~~Y~~ 193 (305)
.++||++|+++ .+||..|..--..+ ++...+|-+.++.++.++.|+++.. ++ ++.|.+
T Consensus 31 ~~Gk~vvl~f~~~~~cp~C~~e~~~l--~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv 108 (164)
T 4gqc_A 31 KRGRPAVLIFFPAAFSPVCTKELCTF--RDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLYNV 108 (164)
T ss_dssp HTSSCEEEEECSCTTCCEECSSCEES--CCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTC
T ss_pred cCCCEEEEEEeCCCCCCCcccchhhh--hhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHHcCC
Confidence 46899999998 89999997654433 2333455566788888888876432 33 344443
Q ss_pred ----------CCCceEEEEeCCCCeeEEEecC-----CCChHHHHHHHHHHHhh
Q 021955 194 ----------DSIPAVLVIDPITGQKICSWCG-----MINPQPLGEMLLPFMDR 232 (305)
Q Consensus 194 ----------~~~P~i~IIdprTGe~~~~~~G-----~~~~~~~l~~L~~fl~~ 232 (305)
...|++.|||+ .|.....|.+ ..+.+++++.|.+...+
T Consensus 109 ~~~~~~~~~~~~~p~tflID~-~G~I~~~~~~~~~~~~~~~~eil~~l~~l~~e 161 (164)
T 4gqc_A 109 YHEDLKGLKMVAKRAVFIVKP-DGTVAYKWVTDNPLNEPDYDEVVREANKIAGE 161 (164)
T ss_dssp EEEEETTEEEEECCEEEEECT-TSBEEEEEECSCTTCCCCHHHHHHHHHHHHHH
T ss_pred cccccccCcCCeeeEEEEECC-CCEEEEEEEeCCCCCCCCHHHHHHHHHHHhcc
Confidence 13578899997 6998877643 24678899888876543
No 201
>2jp7_A MRNA export factor MEX67; solution MEX67, UBA, translation; NMR {Saccharomyces cerevisiae} PDB: 2khh_A
Probab=97.36 E-value=0.00019 Score=51.06 Aligned_cols=44 Identities=9% Similarity=0.033 Sum_probs=41.5
Q ss_pred CchhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Q 021955 4 ESIDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAV 48 (305)
Q Consensus 4 ~s~~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~ 48 (305)
++..+.++|.+|+.. ||-+.+=+..+|+.++||++.|+..|-+.
T Consensus 2 l~~~q~~mv~~~s~~-T~Mn~e~S~~cL~~n~Wd~~~A~~~F~~~ 45 (57)
T 2jp7_A 2 LNPVQLELLNKLHLE-TKLNAEYTFMLAEQSNWNYEVAIKGFQSS 45 (57)
T ss_dssp CCHHHHHHHHHHHHH-HCSCHHHHHHHHHHTTTCSHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHH-HCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 467899999999999 99999999999999999999999999885
No 202
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.33 E-value=0.00052 Score=57.65 Aligned_cols=74 Identities=12% Similarity=0.007 Sum_probs=54.8
Q ss_pred cCCeEEEEeecCC-CccchhhhhccCCCHHHHHHhh-ccEEEEEecCCChhH--------------------HHHHHhcC
Q 021955 135 QDKWLLVNLQSTK-EFSSLMLNRDTWGNEAVSQIIS-VNFIFWQEYDDTSEG--------------------WKVCSFYN 192 (305)
Q Consensus 135 ~~KwLLVniq~~~-~f~c~~lnRDvw~n~~V~~~i~-~nFIfwq~~~ds~eg--------------------~~~~~~Y~ 192 (305)
.+||+||++..+| |..|...- +.+.++.+ .++.|+.++.|+++. ..+++.|.
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~------~~l~~l~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 116 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSV------RTFDERAAASGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYG 116 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHH------HHHHHHHHHTTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTT
T ss_pred CCCEEEEEEEeCCCCchHHHHH------HHHHHHHhhcCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhC
Confidence 3799999999988 99998763 44455444 567777777775532 34667787
Q ss_pred CCCC---------ceEEEEeCCCCeeEEEecC
Q 021955 193 MDSI---------PAVLVIDPITGQKICSWCG 215 (305)
Q Consensus 193 ~~~~---------P~i~IIdprTGe~~~~~~G 215 (305)
+... |++.|||+ .|+.+..+.|
T Consensus 117 v~~~~~~~~g~~~p~~~lid~-~G~I~~~~~g 147 (175)
T 1xvq_A 117 VTIADGPMAGLLARAIVVIGA-DGNVAYTELV 147 (175)
T ss_dssp CBBCSSTTTTSBCSEEEEECT-TSBEEEEEEC
T ss_pred CcccccccCCcccceEEEECC-CCeEEEEEEC
Confidence 7555 99999997 6999988864
No 203
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.30 E-value=0.0013 Score=57.13 Aligned_cols=88 Identities=8% Similarity=0.032 Sum_probs=62.3
Q ss_pred HcCCeEEEEee-----cCCCccchhhhhccCCCHHHHHHh-----hccEEEEEecCCChhHHHHHHhcCCCCCceEEEEe
Q 021955 134 AQDKWLLVNLQ-----STKEFSSLMLNRDTWGNEAVSQII-----SVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVID 203 (305)
Q Consensus 134 ~~~KwLLVniq-----~~~~f~c~~lnRDvw~n~~V~~~i-----~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IId 203 (305)
+..+.++|.+. .+||..|+.|- +.+.++. ..++.|..++.+ +...+++.|++..||++.++.
T Consensus 18 ~~~~~v~v~~~~~~~~~~~C~~c~~~~------~~~~~~a~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~Ptl~~~~ 89 (229)
T 2ywm_A 18 EFKEPVSIKLFSQAIGCESCQTAEELL------KETVEVIGEAVGQDKIKLDIYSPF--THKEETEKYGVDRVPTIVIEG 89 (229)
T ss_dssp HCCSCEEEEEECCCTTCGGGGHHHHHH------HHHHHHHHHHHCTTTEEEEEECTT--TCHHHHHHTTCCBSSEEEEES
T ss_pred hccCCeEEEEEccCCCCcccHHHHHHH------HHHHHHHhccCCCCceEEEEecCc--ccHHHHHHcCCCcCcEEEEEC
Confidence 44556665555 45666777664 3333332 467888887655 467899999999999999996
Q ss_pred CCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 204 PITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 204 prTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
.|.....+.|..+.+++...+...+.
T Consensus 90 --~~~~~~~~~G~~~~~~l~~~~~~~~~ 115 (229)
T 2ywm_A 90 --DKDYGIRYIGLPAGLEFTTLINGIFH 115 (229)
T ss_dssp --SSCCCEEEESCCCTTHHHHHHHHHHH
T ss_pred --CCcccceecCCccHHHHHHHHHHHHh
Confidence 36667778898888888777777665
No 204
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.26 E-value=0.0015 Score=59.32 Aligned_cols=97 Identities=14% Similarity=0.152 Sum_probs=70.5
Q ss_pred ccccHHHHHHHHHHcCCeEEEEee--cCCCccchhhhhccCCCHHHHHHhh---ccEEEEEecCCC---hhHHHHHHhcC
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQ--STKEFSSLMLNRDTWGNEAVSQIIS---VNFIFWQEYDDT---SEGWKVCSFYN 192 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq--~~~~f~c~~lnRDvw~n~~V~~~i~---~nFIfwq~~~ds---~eg~~~~~~Y~ 192 (305)
-..+|++++ ..++.+||+|+ .+||. |. -+| +.+.+-+. .+++|..+|.+. .+...++..|+
T Consensus 22 t~~nF~~vi----~~~~~vlV~Fy~~ApWCg----l~-P~~--e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~ 90 (248)
T 2c0g_A 22 DELSFEKTV----ERFPYSVVKFDIASPYGE----KH-EAF--TAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYK 90 (248)
T ss_dssp CTTTHHHHH----TTSSEEEEEEEESSCCSH----HH-HHH--HHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTT
T ss_pred CHHHHHHHH----hcCCCEEEEEECCCCCCc----cH-HHH--HHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhC
Confidence 456787754 56789999999 99987 42 122 22333332 369999999776 34678999999
Q ss_pred CC--CCceEEEEeCCCCe--eEEEe--cCCCChHHHHHHHHHHHh
Q 021955 193 MD--SIPAVLVIDPITGQ--KICSW--CGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 193 ~~--~~P~i~IIdprTGe--~~~~~--~G~~~~~~~l~~L~~fl~ 231 (305)
+. .||+|.++- |+ ....+ .|..+.+.+++.|.+.+.
T Consensus 91 V~~~~~PTl~~F~---G~~~~~~~y~~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 91 VDDKNFPSIFLFK---GNADEYVQLPSHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp CCTTSCCEEEEES---SSSSSEEECCTTSCCCHHHHHHHHHHHSS
T ss_pred CCcCCCCeEEEEe---CCcCcceeecccCCCCHHHHHHHHHHhhc
Confidence 99 999999995 66 25667 898899887777777654
No 205
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.26 E-value=0.0027 Score=56.04 Aligned_cols=35 Identities=11% Similarity=0.377 Sum_probs=30.2
Q ss_pred ceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 197 PAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 197 P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
|+..|||+ .|+.+.+|.|.++++++.+.|...|.+
T Consensus 178 pttfLID~-~G~vv~~~~g~~~~~~l~~~I~~ll~~ 212 (215)
T 2i3y_A 178 FEKFLVGP-DGIPVMRWSHRATVSSVKTDILAYLKQ 212 (215)
T ss_dssp TCEEEECT-TSCEEEEECTTSCHHHHHHHHHHHGGG
T ss_pred ceEEEECC-CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 68899996 799999999989999988888887764
No 206
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.23 E-value=0.0013 Score=59.39 Aligned_cols=96 Identities=14% Similarity=0.203 Sum_probs=68.5
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeec--CCCccchhhhhccCCCHHHHHHhh--ccEEEEEecCCC---hhHHHHHHhcCC
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQS--TKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDT---SEGWKVCSFYNM 193 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~--~~~f~c~~lnRDvw~n~~V~~~i~--~nFIfwq~~~ds---~eg~~~~~~Y~~ 193 (305)
-..+|++.+ ..++.+||+|+. +||. |. .+| +.+.+-+. .+++|..+|++. .+...+++.|++
T Consensus 11 t~~nF~~~i----~~~~~vlV~FyA~~pWCg----l~-P~~--e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V 79 (240)
T 2qc7_A 11 DTVTFYKVI----PKSKFVLVKFDTQYPYGE----KQ-DEF--KRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKL 79 (240)
T ss_dssp CTTHHHHHG----GGCSEEEEEECCSSCCSH----HH-HHH--HHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTC
T ss_pred CHHHHHHHH----cCCCCEEEEEeCCCCCCc----ch-HHH--HHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCC
Confidence 345677755 467999999999 9987 32 122 23333333 369999999774 456789999999
Q ss_pred C--CCceEEEEeCCCCe--eEEEecCCCChHHHHHHHHHH
Q 021955 194 D--SIPAVLVIDPITGQ--KICSWCGMINPQPLGEMLLPF 229 (305)
Q Consensus 194 ~--~~P~i~IIdprTGe--~~~~~~G~~~~~~~l~~L~~f 229 (305)
. .||+|.++.. |+ .+..+.|..+.+.+++.|...
T Consensus 80 ~~~~~PTl~~f~~--G~~~~~~~y~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 80 DKESYPVFYLFRD--GDFENPVPYTGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp CGGGCSEEEEEET--TCSSCCEECCSCSCHHHHHHHHHHT
T ss_pred CCCCCCEEEEEeC--CCcCcceeecCCCCHHHHHHHHHHh
Confidence 9 9999999963 66 356788988887766655544
No 207
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.21 E-value=0.0016 Score=57.43 Aligned_cols=93 Identities=13% Similarity=0.075 Sum_probs=62.3
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhH-H-------------------------HH
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG-W-------------------------KV 187 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg-~-------------------------~~ 187 (305)
.+||+||++. .+||..|...-..+ ++...+|-..++.++.++.|+++. . .+
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l--~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 132 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEF--NKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDI 132 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHH--HHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHH--HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHH
Confidence 5899999999 99999997653332 122223333467777777666432 2 23
Q ss_pred HHhcCC-----CCCceEEEEeCCCCeeEEEecCC----CChHHHHHHHHHHH
Q 021955 188 CSFYNM-----DSIPAVLVIDPITGQKICSWCGM----INPQPLGEMLLPFM 230 (305)
Q Consensus 188 ~~~Y~~-----~~~P~i~IIdprTGe~~~~~~G~----~~~~~~l~~L~~fl 230 (305)
++.|.+ ..+|++.|||+ .|+.+..+.|. .+++++++.|....
T Consensus 133 ~~~ygv~~~~g~~~P~~~lID~-~G~I~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 133 SKNYNVLYDNSFALRGLFIIDK-NGCVRHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HHHTTCEETTTEECEEEEEECT-TSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHcCCcccCCCccceEEEECC-CCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 344555 25799999997 69988887663 35788888777765
No 208
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.20 E-value=0.0014 Score=54.23 Aligned_cols=90 Identities=14% Similarity=0.123 Sum_probs=55.7
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHH-HHHH------------------hcCCC
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGW-KVCS------------------FYNMD 194 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~-~~~~------------------~Y~~~ 194 (305)
.+|+++|++. .+||..|..--..+ .....++-..++.++.++.|+++.. ++++ .|.+.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l--~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~ 106 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTF--RDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVA 106 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CC--SCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCE
T ss_pred CCCeEEEEecCCCCCCccccchhhc--ccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCc
Confidence 4899999998 89999997654443 3334455566788888888876543 3444 44431
Q ss_pred -----------CCceEEEEeCCCCeeEEEecC-----CCChHHHHHHHH
Q 021955 195 -----------SIPAVLVIDPITGQKICSWCG-----MINPQPLGEMLL 227 (305)
Q Consensus 195 -----------~~P~i~IIdprTGe~~~~~~G-----~~~~~~~l~~L~ 227 (305)
..|++.|||+ .|.....|.| ..+.+++++.|.
T Consensus 107 ~~~~~~~~~~~~~p~tflID~-~G~I~~~~~~~~~~~~~~~~eil~~l~ 154 (157)
T 4g2e_A 107 WEFPALPGYVLAKRAVFVIDK-EGKVRYKWVSDDPTKEPPYDEIEKVVK 154 (157)
T ss_dssp EECTTSTTCEEECEEEEEECT-TSBEEEEEEESSTTCCCCHHHHHHHHH
T ss_pred cccccCCCcceeeeeEEEECC-CCEEEEEEECCCCCCCCCHHHHHHHHH
Confidence 3567889997 6888777644 235566665553
No 209
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.17 E-value=0.0035 Score=54.76 Aligned_cols=35 Identities=20% Similarity=0.382 Sum_probs=30.2
Q ss_pred ceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 197 PAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 197 P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
|+..|||+ .|+.+.+|.|.++++++...|...|.+
T Consensus 160 ~ttflID~-~G~i~~~~~g~~~~~~l~~~I~~ll~~ 194 (207)
T 2r37_A 160 FEKFLVGP-DGIPIMRWHHRTTVSNVKMDILSYMRR 194 (207)
T ss_dssp TCEEEECT-TSCEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred ceEEEECC-CCcEEEEECCCCCHHHHHHHHHHHHhh
Confidence 68899996 799999999989999988888888764
No 210
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.13 E-value=0.0015 Score=57.03 Aligned_cols=93 Identities=12% Similarity=0.065 Sum_probs=61.4
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhH-HH-------------------------H
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG-WK-------------------------V 187 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg-~~-------------------------~ 187 (305)
.+||+||++. .+||..|..--..+ ++...+|-..++.++.++.|+++. .+ +
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l--~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 124 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAF--GDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQI 124 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHH--HHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHH--HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHH
Confidence 4799999999 99999997643222 112222323467777777776542 22 3
Q ss_pred HHhcCCC------CCceEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHH
Q 021955 188 CSFYNMD------SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFM 230 (305)
Q Consensus 188 ~~~Y~~~------~~P~i~IIdprTGe~~~~~~G~~----~~~~~l~~L~~fl 230 (305)
++.|.+. ..|++.|||+ .|+.+..+.|.. ++++++..|....
T Consensus 125 ~~~ygv~~~~~g~~~p~~~lID~-~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 125 SKDYGVYLEDSGHTLRGLFIIDD-KGILRQITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp HHHTTCEETTTTEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHcCCcccCCCcccceEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 3344442 4899999997 699888876643 5678888777655
No 211
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.13 E-value=0.0021 Score=54.22 Aligned_cols=92 Identities=14% Similarity=0.223 Sum_probs=60.0
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhH-HHHHH------------------hcCCC
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG-WKVCS------------------FYNMD 194 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg-~~~~~------------------~Y~~~ 194 (305)
.+||++|++. ..||..|..--..+ .....+|-..++.++.+..|+++. .++++ .|.+.
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l--~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~ 127 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEF--NLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVI 127 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHH--HHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCE
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHH--HHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCc
Confidence 4789999998 88999997654333 233334444568888888887543 23333 44441
Q ss_pred ------------CCceEEEEeCCCCeeEEEecCCC---ChHHHHHHHHHH
Q 021955 195 ------------SIPAVLVIDPITGQKICSWCGMI---NPQPLGEMLLPF 229 (305)
Q Consensus 195 ------------~~P~i~IIdprTGe~~~~~~G~~---~~~~~l~~L~~f 229 (305)
..|++.|||+ .|+.+..|.|.. ..+++++.|...
T Consensus 128 ~~~~~~g~~~~~~~p~~~lID~-~G~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 128 KEKTMYGRQVIGIERSTFLIGP-THRIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp EEECCC--CEEEECCEEEEECT-TSBEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred ccccccCcccCCcceEEEEECC-CCEEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 2588999997 699988886542 345566555543
No 212
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.12 E-value=0.0024 Score=52.28 Aligned_cols=93 Identities=5% Similarity=0.069 Sum_probs=59.7
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChh-------------------HHHHHHhcCCC
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE-------------------GWKVCSFYNMD 194 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~e-------------------g~~~~~~Y~~~ 194 (305)
++||++|++. .+||..|...-..+ ++...+|-..+ .++.++.|+++ ...+++.|++.
T Consensus 34 k~~~vvl~f~~~~~c~~C~~~~~~l--~~~~~~~~~~~-~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 110 (159)
T 2a4v_A 34 NNRVVVFFVYPRASTPGSTRQASGF--RDNYQELKEYA-AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAK 110 (159)
T ss_dssp HCSEEEEEECSSSSSHHHHHHHHHH--HHHHHHHTTTC-EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCB
T ss_pred CCCeEEEEEcCCCCCCCHHHHHHHH--HHHHHHHHhCC-cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCc
Confidence 3569999986 88999997653222 12222232234 55555555543 22456677777
Q ss_pred CCc------eEEEEeCCCCeeEEEecCCC---ChHHHHHHHHHHHhh
Q 021955 195 SIP------AVLVIDPITGQKICSWCGMI---NPQPLGEMLLPFMDR 232 (305)
Q Consensus 195 ~~P------~i~IIdprTGe~~~~~~G~~---~~~~~l~~L~~fl~~ 232 (305)
..| +..|| + .|+.+..+.|.. +.+.+++.|...++.
T Consensus 111 ~~p~~g~~~~~~li-~-~G~i~~~~~g~~~~~~~~~~~~~l~~~l~~ 155 (159)
T 2a4v_A 111 KTPLSGSIRSHFIF-V-DGKLKFKRVKISPEVSVNDAKKEVLEVAEK 155 (159)
T ss_dssp SSSSSCBCCEEEEE-E-TTEEEEEEESCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCccceEEEE-c-CCEEEEEEccCCccccHHHHHHHHHHHHHH
Confidence 777 77777 5 799999998864 346778888887765
No 213
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.11 E-value=0.003 Score=53.65 Aligned_cols=94 Identities=14% Similarity=0.048 Sum_probs=63.0
Q ss_pred cCCeEEEEeec-CCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhH-HHHHHhc---------------------
Q 021955 135 QDKWLLVNLQS-TKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG-WKVCSFY--------------------- 191 (305)
Q Consensus 135 ~~KwLLVniq~-~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg-~~~~~~Y--------------------- 191 (305)
.+||+||++.. +||..|..--..+ +....+|-..++.++.++.|+++. .+|++.+
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l--~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ 106 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDV--ADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRN 106 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHH--HHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHH
T ss_pred CCCeEEEEEECCCCCCccHHHHHHH--HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHH
Confidence 58999999984 8999997653332 222333334567788887776542 3444444
Q ss_pred -CCC------CCceEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHHh
Q 021955 192 -NMD------SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFMD 231 (305)
Q Consensus 192 -~~~------~~P~i~IIdprTGe~~~~~~G~~----~~~~~l~~L~~fl~ 231 (305)
++. ..|++.|||+ .|+.+..+.|.. +.+++++.|.....
T Consensus 107 ygv~~~~~g~~~p~~~lID~-~G~i~~~~~~~~~~~~~~~~l~~~l~~l~~ 156 (186)
T 1n8j_A 107 FDNMREDEGLADRATFVVDP-QGIIQAIEVTAEGIGRDASDLLRKIKAAQY 156 (186)
T ss_dssp TTCEETTTTEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred hCCccCCCCceeeEEEEECC-CCeEEEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 332 2599999997 699888887643 57888877776653
No 214
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.05 E-value=0.00094 Score=51.73 Aligned_cols=68 Identities=12% Similarity=0.120 Sum_probs=47.1
Q ss_pred CCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChh---HHHHHHhcCCCCCceEEEEeCCCCeeEEE
Q 021955 136 DKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE---GWKVCSFYNMDSIPAVLVIDPITGQKICS 212 (305)
Q Consensus 136 ~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~e---g~~~~~~Y~~~~~P~i~IIdprTGe~~~~ 212 (305)
++.|+| +..+||..|+.+.+ .+.+ +...|.+..++.+... ...++..|++..+|++ +++ |+.+..
T Consensus 19 ~~~vv~-f~a~~C~~C~~~~~------~l~~-~~~~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~-~~~---g~~v~~ 86 (116)
T 2e7p_A 19 SAPVVV-FSKTYCGYCNRVKQ------LLTQ-VGASYKVVELDELSDGSQLQSALAHWTGRGTVPNV-FIG---GKQIGG 86 (116)
T ss_dssp SSSEEE-EECTTCHHHHHHHH------HHHH-HTCCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE-EET---TEEEEC
T ss_pred CCCEEE-EECCCChhHHHHHH------HHHH-cCCCeEEEEccCCCChHHHHHHHHHHhCCCCcCEE-EEC---CEEECC
Confidence 456766 89999999998853 3333 3456777777655431 2468889999999999 554 777665
Q ss_pred ecC
Q 021955 213 WCG 215 (305)
Q Consensus 213 ~~G 215 (305)
+.|
T Consensus 87 ~~~ 89 (116)
T 2e7p_A 87 CDT 89 (116)
T ss_dssp HHH
T ss_pred hHH
Confidence 554
No 215
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.04 E-value=0.0038 Score=51.77 Aligned_cols=87 Identities=13% Similarity=-0.031 Sum_probs=53.2
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhh--ccEEEEEecCCChh---------------------HHHHHHh
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSE---------------------GWKVCSF 190 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~--~nFIfwq~~~ds~e---------------------g~~~~~~ 190 (305)
.+||++|++. ..||..|...- +.+.++.+ .++.++.+..|+++ ...+ +.
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~------~~l~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~ 118 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETET------KKFNEIMAGMEGVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDM-EK 118 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHH------HHHHHHTTTCTTEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGG-GG
T ss_pred CCCeEEEEEECCCCCCchHHHH------HHHHHHHHHcCCceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcH-HH
Confidence 3789999998 78999997542 22222221 23444444444332 1223 45
Q ss_pred cCCC---------CCceEEEEeCCCCeeEEEecC-----CCChHHHHHHHHHH
Q 021955 191 YNMD---------SIPAVLVIDPITGQKICSWCG-----MINPQPLGEMLLPF 229 (305)
Q Consensus 191 Y~~~---------~~P~i~IIdprTGe~~~~~~G-----~~~~~~~l~~L~~f 229 (305)
|++. ..|++.|||+ .|+.+..+.| ..+++++++.|...
T Consensus 119 ~gv~~~~~~~~g~~~p~~~liD~-~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 119 YGVLIGEGALKGILARAVFIIDK-EGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp GTCBBCSSTTTTSBCCEEEEECT-TSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred hCCEecccccCCceeeEEEEEcC-CCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 5542 2599999997 6998888754 34678888887653
No 216
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.02 E-value=0.0039 Score=57.88 Aligned_cols=108 Identities=11% Similarity=0.103 Sum_probs=77.9
Q ss_pred CCCccccccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHH---hhccEEEEEecCCChhHHHHHHh
Q 021955 114 RPPFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQI---ISVNFIFWQEYDDTSEGWKVCSF 190 (305)
Q Consensus 114 rPP~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~---i~~nFIfwq~~~ds~eg~~~~~~ 190 (305)
.|....+-..++.... ....+.++|++.++||.+|+.+. +.+.++ .+..+.|..++.+..+..++++.
T Consensus 116 ~p~v~~~~~~~~~~~~---~~~~~~~~v~F~~~~~~~~~~~~------~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~ 186 (361)
T 3uem_A 116 LPLVIEFTEQTAPKIF---GGEIKTHILLFLPKSVSDYDGKL------SNFKTAAESFKGKILFIFIDSDHTDNQRILEF 186 (361)
T ss_dssp SCSEEECSTTTHHHHH---SCSCCEEEEEECCSSSSSHHHHH------HHHHHHHGGGTTTCEEEEECTTSGGGHHHHHH
T ss_pred CCcceecCcccHHHHh---cCCCCcEEEEEEeCCchhHHHHH------HHHHHHHHHccCceEEEEecCChHHHHHHHHH
Confidence 4555555566666443 23456778899999999999884 444444 44568888888887778899999
Q ss_pred cCCCC--CceEEEEeCCCCeeEEEec---CCCChHHHHHHHHHHHhh
Q 021955 191 YNMDS--IPAVLVIDPITGQKICSWC---GMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 191 Y~~~~--~P~i~IIdprTGe~~~~~~---G~~~~~~~l~~L~~fl~~ 232 (305)
|++.. +|+++|++. |..+..+. |..+++.+.+-+..+++.
T Consensus 187 fgi~~~~~P~~~~~~~--~~~~~ky~~~~~~~~~~~l~~fi~~~l~g 231 (361)
T 3uem_A 187 FGLKKEECPAVRLITL--EEEMTKYKPESEELTAERITEFCHRFLEG 231 (361)
T ss_dssp TTCCTTTCSEEEEEEC--C--CCEECCSSCCCCHHHHHHHHHHHHTT
T ss_pred cCCCccCCccEEEEEc--CCcccccCCCccccCHHHHHHHHHHHhcC
Confidence 99977 999999996 23333343 678999988888888864
No 217
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.01 E-value=0.0026 Score=53.23 Aligned_cols=98 Identities=12% Similarity=0.054 Sum_probs=61.9
Q ss_pred cCCeEEEEeecCCCc-cchhhhhccCCCHHHHHHhh--ccEEEEEecCC-----------------------------Ch
Q 021955 135 QDKWLLVNLQSTKEF-SSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDD-----------------------------TS 182 (305)
Q Consensus 135 ~~KwLLVniq~~~~f-~c~~lnRDvw~n~~V~~~i~--~nFIfwq~~~d-----------------------------s~ 182 (305)
.+||+||++..+||. .|...-..+ .....++-. .++.++.+..| ..
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l--~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~ 104 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSL--LKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSE 104 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHH--HTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHH
T ss_pred CCCEEEEEEECCCCCchhHHHHHHH--HHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHH
Confidence 389999999999996 586543221 111111111 23444443332 12
Q ss_pred hHHHHHHhcCC---------CCCceEEEEeCCCCeeEEEecCC-CChHHHHHHHHHHHhhCCC
Q 021955 183 EGWKVCSFYNM---------DSIPAVLVIDPITGQKICSWCGM-INPQPLGEMLLPFMDRSPR 235 (305)
Q Consensus 183 eg~~~~~~Y~~---------~~~P~i~IIdprTGe~~~~~~G~-~~~~~~l~~L~~fl~~~~~ 235 (305)
+..++++.|.+ ...|++.|||| .|+.+..+.|. .++++++..|.+.+.....
T Consensus 105 ~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~-~G~i~~~~~g~~~~~~~i~~~l~~~~~~~~~ 166 (170)
T 3me7_A 105 DLFKLLDAIDFRFMTAGNDFIHPNVVVVLSP-ELQIKDYIYGVNYNYLEFVNALRLARGEGHH 166 (170)
T ss_dssp HHHHHHHHTTCCCEEETTEEECCCEEEEECT-TSBEEEEEESSSCCHHHHHHHHHHHTTCSCT
T ss_pred HHHHHHHHCCeEEecCCCccccCceEEEECC-CCeEEEEEeCCCCCHHHHHHHHHHhhccccc
Confidence 34456666543 34588999998 69998888886 6899999988887765544
No 218
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=96.91 E-value=0.0017 Score=58.00 Aligned_cols=91 Identities=11% Similarity=0.067 Sum_probs=59.9
Q ss_pred cCCeEEEEeec-CCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhH-H-------------------------HH
Q 021955 135 QDKWLLVNLQS-TKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG-W-------------------------KV 187 (305)
Q Consensus 135 ~~KwLLVniq~-~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg-~-------------------------~~ 187 (305)
.+||+||++.. .||+.|..--..+ .....+|-..++.++.++.|+.+. . .+
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l--~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v 153 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAF--SDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQI 153 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHH--HHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHH--HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHH
Confidence 47999999998 8999998653222 222233333468888888777543 1 23
Q ss_pred HHhcCCC------CCceEEEEeCCCCeeEEEecCCC----ChHHHHHHHHH
Q 021955 188 CSFYNMD------SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLP 228 (305)
Q Consensus 188 ~~~Y~~~------~~P~i~IIdprTGe~~~~~~G~~----~~~~~l~~L~~ 228 (305)
++.|++. .+|.+.|||+ .|+.+..+.|.. ..+++++.|..
T Consensus 154 ~~~ygv~~~~~g~~~p~~flID~-~G~I~~~~~~~~~~~~~~~eil~~l~~ 203 (240)
T 3qpm_A 154 SKDYGVYLEDQGHTLRGLFIIDE-KGVLRQITMNDLPVGRSVDETLRLVQA 203 (240)
T ss_dssp HHHTTCEETTTTEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HHHhCCccccCCCccceEEEEcC-CCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 4445553 5799999997 699888866532 45666666554
No 219
>1wji_A Tudor domain containing protein 3; UBA domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=96.90 E-value=0.0032 Score=45.46 Aligned_cols=42 Identities=19% Similarity=0.274 Sum_probs=38.4
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021955 7 DKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (305)
Q Consensus 7 ~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 50 (305)
...+.|.+.+++ |-+.+.|++-|.+++||++.|++..|.+..
T Consensus 8 ~~~~~I~~L~~M--GF~~~~a~~AL~~~~~nve~A~e~L~~~~~ 49 (63)
T 1wji_A 8 VDEKALKHITEM--GFSKEASRQALMDNGNNLEAALNVLLTSNK 49 (63)
T ss_dssp SCHHHHHHHHTT--TCCHHHHHHHHHHTTSCHHHHHHHHHHHSS
T ss_pred CCHHHHHHHHHc--CCCHHHHHHHHHHhCCCHHHHHHHHHHCCC
Confidence 457889999999 899999999999999999999999998764
No 220
>1dv0_A DNA repair protein HHR23A; helical bundle, DNA binding protein; HET: DNA; NMR {Homo sapiens} SCOP: a.5.2.1 PDB: 1f4i_A
Probab=96.90 E-value=0.00058 Score=46.52 Aligned_cols=42 Identities=14% Similarity=0.138 Sum_probs=38.3
Q ss_pred hhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021955 6 IDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (305)
Q Consensus 6 ~~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 49 (305)
.+..+.|.+.+++ |-+...|++.|.+|+||++.|++..|++.
T Consensus 2 ~~e~eaI~rL~~m--GF~~~~a~~Al~a~~~n~e~A~~~Lf~~~ 43 (47)
T 1dv0_A 2 SQEKEAIERLKAL--GFPESLVIQAYFACEKNENLAANFLLSQN 43 (47)
T ss_dssp -CCHHHHTTTTTT--TCCHHHHHHHHTTTTSCHHHHHHHTTSCC
T ss_pred cchHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHhCc
Confidence 4678899999999 99999999999999999999999999864
No 221
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=96.86 E-value=0.0096 Score=49.90 Aligned_cols=92 Identities=10% Similarity=0.103 Sum_probs=56.7
Q ss_pred cCCeEEEEeecCCCc-cchhhhhccCCCHHHHHHhh---ccEEEEEecC----CChhH-HHHHHhcC-------------
Q 021955 135 QDKWLLVNLQSTKEF-SSLMLNRDTWGNEAVSQIIS---VNFIFWQEYD----DTSEG-WKVCSFYN------------- 192 (305)
Q Consensus 135 ~~KwLLVniq~~~~f-~c~~lnRDvw~n~~V~~~i~---~nFIfwq~~~----ds~eg-~~~~~~Y~------------- 192 (305)
++||+|||+..+||. .|......+ ..+.+.++ .++.++.+++ |+++. .+|+..|+
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l---~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~~~~~~~~~~~ltg~~ 107 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANM---AKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQKFTEDTSNWNLLTGYS 107 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHH---HHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTTCSCCTTEEEEBCSC
T ss_pred CCCEEEEEEECCCCCCcccHHHHHH---HHHHHhhhcccccceeEeeecCcccccHHHHHHHHHHcCCCCCCceecCccc
Confidence 589999999999996 686543332 22333332 2354554443 34432 23333322
Q ss_pred -----------------------CCCCceEEEEeCCCCeeEEEecCC--CChHHHHHHHHHHH
Q 021955 193 -----------------------MDSIPAVLVIDPITGQKICSWCGM--INPQPLGEMLLPFM 230 (305)
Q Consensus 193 -----------------------~~~~P~i~IIdprTGe~~~~~~G~--~~~~~~l~~L~~fl 230 (305)
+..-|++.|||| .|+.+..|.|. ...+++++.|+.-+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~-~G~i~~~~~g~~~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 108 LEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQ-NGKVMKKYSGISNTPYEDIIRDMKRLA 169 (170)
T ss_dssp HHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECT-TSCEEEEEESSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccccccCCCCceEEeeeEEEEEcC-CCeEEEEECCCCCCCHHHHHHHHHHHh
Confidence 112378899997 69999889885 35688888887655
No 222
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=96.84 E-value=0.016 Score=50.61 Aligned_cols=108 Identities=9% Similarity=0.051 Sum_probs=72.0
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCC--CCce
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMD--SIPA 198 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~--~~P~ 198 (305)
-.-+.+.+...-....+++++.+.+.+|..|..+- ..| ..|.+-.+.++.|.-++.+..+..++++.|++. .+|.
T Consensus 116 ~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~-~~~--~~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~ 192 (227)
T 4f9z_D 116 TEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENM-HRY--QKAAKLFQGKILFILVDSGMKENGKVISFFKLKESQLPA 192 (227)
T ss_dssp EECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHH-HHH--HHHHHHTTTTCEEEEEETTSGGGHHHHHHTTCCGGGCSE
T ss_pred eecCcccHHHHhccCCceEEEEEEcCCcchHHHHH-HHH--HHHHHHhhCCEEEEEeCCccHhHHHHHHHcCCCcccCCE
Confidence 34455555555455557777777787888887663 222 234444556677777887766666788999997 8999
Q ss_pred EEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 199 VLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 199 i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
|+|++...+.+...-.|.++++.+.+-|..|++
T Consensus 193 ~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~ 225 (227)
T 4f9z_D 193 LAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLS 225 (227)
T ss_dssp EEEEESSSCCEEEETTCCCCHHHHHHHHHHHHT
T ss_pred EEEEECCCCccccCCcCCCCHHHHHHHHHHHhC
Confidence 999997544333222366788887777777664
No 223
>1vg5_A RSGI RUH-014, rhomboid family protein; UBA domain, cDNA, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=96.83 E-value=0.0016 Score=48.51 Aligned_cols=44 Identities=16% Similarity=0.208 Sum_probs=39.2
Q ss_pred chhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021955 5 SIDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (305)
Q Consensus 5 s~~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 50 (305)
....++.|.+.+++ |-+.+.|+.-|.+++||++.|++..|.+.+
T Consensus 26 ~~~~ee~I~~L~eM--GF~r~~a~~AL~~~~~nve~Ave~Ll~~~~ 69 (73)
T 1vg5_A 26 VAASEEQIQKLVAM--GFDRTQVEVALAAADDDLTVAVEILMSQSG 69 (73)
T ss_dssp SCCCHHHHHHHHTT--TCCHHHHHHHHHHHTSCHHHHHHHHHTCSC
T ss_pred CcccHHHHHHHHHc--CCCHHHHHHHHHHhCCCHHHHHHHHHHCCC
Confidence 34567899999999 899999999999999999999999998653
No 224
>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A
Probab=96.83 E-value=0.00056 Score=64.85 Aligned_cols=41 Identities=24% Similarity=0.473 Sum_probs=38.0
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021955 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 49 (305)
..+++.+|.+| ||+|...|..||+..+||||.||+.||+..
T Consensus 45 ~~~~~~~f~~~-~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~ 85 (362)
T 4gew_A 45 DEQKLHEFAII-TATDEAFAQSILQDVDWDLKKALDVFYGSE 85 (362)
T ss_dssp HHHHHHHHHHH-HTCCHHHHHHHTTSSSSCHHHHHHHHHHCG
T ss_pred hHHHHHHHHHH-hCCcHHHHHHHHhhcCchHHHHHHHHcCCc
Confidence 45689999999 999999999999999999999999999653
No 225
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=96.81 E-value=0.0019 Score=58.51 Aligned_cols=91 Identities=11% Similarity=0.032 Sum_probs=59.4
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhH-H-------------------------HH
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG-W-------------------------KV 187 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg-~-------------------------~~ 187 (305)
.+||+||++. ..||+.|..--..+ .....+|-..++.++.++.|+.+. . .+
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l--~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~v 167 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAF--GDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQI 167 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHH--HHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHH--HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHH
Confidence 4799999999 88999997643222 222333434567788887776543 1 33
Q ss_pred HHhcCCC------CCceEEEEeCCCCeeEEEecCC----CChHHHHHHHHH
Q 021955 188 CSFYNMD------SIPAVLVIDPITGQKICSWCGM----INPQPLGEMLLP 228 (305)
Q Consensus 188 ~~~Y~~~------~~P~i~IIdprTGe~~~~~~G~----~~~~~~l~~L~~ 228 (305)
++.|.+. .+|.+.|||+ .|..+..+.+. ...++++..|..
T Consensus 168 a~~ygv~~~~~g~~~p~tflID~-~G~I~~~~~~~~~~~~~~~eil~~L~a 217 (254)
T 3tjj_A 168 SKDYGVYLEDSGHTLRGLFIIDD-KGILRQITLNDLPVGRSVDETLRLVQA 217 (254)
T ss_dssp HHHHTCEETTTTEECEEEEEECT-TSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred HHHcCCccccCCCccceEEEECC-CCeEEEEEecCCCCCCCHHHHHHHHHh
Confidence 4445542 4799999997 69988886653 245666666554
No 226
>1ify_A HHR23A, UV excision repair protein RAD23 homolog A; ubiquitin associated domain, UBA domain, ubiquitin proteosome pathway, DNA binding protein; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=96.81 E-value=0.0015 Score=44.70 Aligned_cols=41 Identities=12% Similarity=0.210 Sum_probs=37.4
Q ss_pred hhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Q 021955 6 IDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAV 48 (305)
Q Consensus 6 ~~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~ 48 (305)
...++.|.+.+++ |-+.+.|+.-|.+++||++.|++..|++
T Consensus 6 ~~~~~~i~~L~~M--GF~~~~a~~AL~~~~~n~e~A~e~L~~g 46 (49)
T 1ify_A 6 SEYETMLTEIMSM--GYERERVVAALRASYNNPHRAVEYLLTG 46 (49)
T ss_dssp HHHHHHHHHHHHT--TCCHHHHHHHHHTTTSCSHHHHHHHHHC
T ss_pred ccCHHHHHHHHHc--CCCHHHHHHHHHHhCCCHHHHHHHHHhC
Confidence 4567899999999 8899999999999999999999998874
No 227
>2dah_A Ubiquilin-3; UBA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=96.81 E-value=0.0023 Score=44.87 Aligned_cols=42 Identities=12% Similarity=0.057 Sum_probs=36.8
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021955 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 50 (305)
-++.|.+.+++ +=.+...+++.|.+++||++.||...|..++
T Consensus 9 ~~~~l~~L~~M-GF~d~~~n~~AL~~~~Gdv~~Ave~L~~~~~ 50 (54)
T 2dah_A 9 FQVQLEQLRSM-GFLNREANLQALIATGGDVDAAVEKLRQSSG 50 (54)
T ss_dssp SHHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHc-CCCcHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 36789999999 5557777899999999999999999998765
No 228
>2g3q_A Protein YBL047C; endocytosis, solution structure, UBA domain, endocytosis/signaling protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=96.78 E-value=0.0024 Score=42.26 Aligned_cols=39 Identities=18% Similarity=0.352 Sum_probs=35.6
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Q 021955 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAV 48 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~ 48 (305)
..+.|.+.+++ |-+.+.|++-|..++||++.|++..|++
T Consensus 4 ~e~~i~~L~~M--GF~~~~a~~AL~~~~~n~e~A~~~L~~~ 42 (43)
T 2g3q_A 4 KSLAVEELSGM--GFTEEEAHNALEKCNWDLEAATNFLLDS 42 (43)
T ss_dssp HHHHHHHHHTT--TSCHHHHHHHHHHHTSCHHHHHHHHHTC
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHhCcCHHHHHHHHHcC
Confidence 45789999999 8999999999999999999999988764
No 229
>2knz_A Ubiquilin-4; cytoplasm, endoplasmic reticulum, nucleus, phosphoprotein, protein binding; NMR {Mus musculus}
Probab=96.76 E-value=0.0027 Score=44.22 Aligned_cols=41 Identities=12% Similarity=0.112 Sum_probs=36.4
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021955 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 49 (305)
-.++|.+.+++ +-.+.+.|++.|..++||++.||+..|++.
T Consensus 11 ~~~~l~~L~~M-GF~~~~~~~~AL~~t~gnve~Ave~L~~~~ 51 (53)
T 2knz_A 11 FQQQLEQLNSM-GFINREANLQALIATGGDINAAIERLLGSQ 51 (53)
T ss_dssp HHHHHHHHHTT-TCCCHHHHHHHHHHHTSCHHHHHHHHHHCC
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHHcC
Confidence 45789999999 544999999999999999999999999864
No 230
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.69 E-value=0.0015 Score=50.35 Aligned_cols=81 Identities=15% Similarity=0.027 Sum_probs=54.9
Q ss_pred CCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecC
Q 021955 136 DKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCG 215 (305)
Q Consensus 136 ~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G 215 (305)
.+..+|.+..+||..|+.+.+-+ . + +..++-|..++++.++...++..|. ...|+| +++ |+.+ .+ |
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L-~-----~-l~~~i~~~~vdi~~~~~~el~~~~g-~~vP~l-~~~---g~~~-~~-~ 80 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVL-Q-----P-YKDRFILQEVDITLPENSTWYERYK-FDIPVF-HLN---GQFL-MM-H 80 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHT-S-----T-TSSSSEEEEEETTSSTTHHHHHHSS-SSCSEE-EES---SSEE-EE-S
T ss_pred CCCEEEEEeCCCCcchHHHHHHH-H-----H-hhhCCeEEEEECCCcchHHHHHHHC-CCCCEE-EEC---CEEE-Ee-c
Confidence 45678888999999999885432 1 1 1234667778888666788999999 999976 444 6654 33 3
Q ss_pred CCChHHHHHHHHHHH
Q 021955 216 MINPQPLGEMLLPFM 230 (305)
Q Consensus 216 ~~~~~~~l~~L~~fl 230 (305)
..+++++.+.|..++
T Consensus 81 g~~~~~l~~~l~~~~ 95 (100)
T 1wjk_A 81 RVNTSKLEKQLRKLS 95 (100)
T ss_dssp SCCHHHHHHHHHSSS
T ss_pred CCCHHHHHHHHHHHH
Confidence 467776655554433
No 231
>1veg_A NEDD8 ultimate buster-1; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=96.66 E-value=0.0025 Score=48.58 Aligned_cols=41 Identities=15% Similarity=0.112 Sum_probs=38.1
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021955 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 50 (305)
..++|.+.+++ |-+.+.|+..|.+++||++.|++..|.+.+
T Consensus 29 ~ee~I~~Lv~M--GF~~~~A~~AL~~t~gdve~A~e~L~sh~~ 69 (83)
T 1veg_A 29 SQESINQLVYM--GFDTVVAEAALRVFGGNVQLAAQTLAHHGG 69 (83)
T ss_dssp CHHHHHHHHHH--SCCHHHHHHHHHHTTTCHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 46899999999 899999999999999999999999999765
No 232
>2bwb_A Ubiquitin-like protein DSK2; UBA, signaling protein; 2.3A {Saccharomyces cerevisiae} SCOP: a.5.2.1 PDB: 2bwe_A
Probab=96.63 E-value=0.0032 Score=42.64 Aligned_cols=39 Identities=8% Similarity=0.020 Sum_probs=34.7
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021955 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFA 47 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~ 47 (305)
-++.|.+.+++ +-.+.+.+++.|.+++||++.||...|+
T Consensus 7 ~~~~i~~L~~M-GF~d~~~~~~AL~~~~gnv~~Ave~L~~ 45 (46)
T 2bwb_A 7 YEHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLN 45 (46)
T ss_dssp THHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHHC
T ss_pred HHHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHc
Confidence 35789999999 5578889999999999999999999886
No 233
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=96.61 E-value=0.0037 Score=54.59 Aligned_cols=86 Identities=14% Similarity=0.183 Sum_probs=60.7
Q ss_pred HcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecC--------------------------------
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYD-------------------------------- 179 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~-------------------------------- 179 (305)
..+|..+|.+.++||..|+.+... +.++.+. .+++..+..
T Consensus 84 ~~~k~~vv~F~d~~Cp~C~~~~~~------l~~l~~~~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~ 157 (216)
T 1eej_A 84 PQEKHVITVFTDITCGYCHKLHEQ------MADYNALGITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKS 157 (216)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHTT------HHHHHHTTEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCC
T ss_pred CCCCEEEEEEECCCCHHHHHHHHH------HHHHHhCCcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCC
Confidence 457999999999999999999654 5566543 344433321
Q ss_pred --------CChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 180 --------DTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 180 --------ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
.-.+..++++.|++..+|+++|.| |+ .+.|..++++|.+.|...+.
T Consensus 158 ~~~~~~~~~v~~~~~l~~~~gV~gtPt~v~~d---G~---~~~G~~~~~~l~~~l~~~~~ 211 (216)
T 1eej_A 158 VAPASCDVDIADHYALGVQLGVSGTPAVVLSN---GT---LVPGYQPPKEMKEFLDEHQK 211 (216)
T ss_dssp CCCCCCSCCHHHHHHHHHHHTCCSSSEEECTT---SC---EEESCCCHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHcCCCccCEEEEcC---Ce---EecCCCCHHHHHHHHHHhhh
Confidence 112345678899999999995544 54 35798899888887776654
No 234
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=96.57 E-value=0.017 Score=47.41 Aligned_cols=87 Identities=11% Similarity=-0.066 Sum_probs=52.7
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhh--ccEEEEEecCCChh---------------------HHHHHHh
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSE---------------------GWKVCSF 190 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~--~nFIfwq~~~ds~e---------------------g~~~~~~ 190 (305)
.+||++|++. +.||..|..-- +.+.++.+ .++.++.++.|+++ ...+++.
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~------~~l~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 114 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQT------RRFNEELAGLDNTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRD 114 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHH------HHHHHHTTTCTTEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHHHH
T ss_pred CCCEEEEEEECCCCCCccHHHH------HHHHHHHHHcCCcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHHHH
Confidence 4789999998 58999997532 12222221 23444444444332 2245555
Q ss_pred cCCC----C--CceEEEEeCCCCeeEEEecCC-----CChHHHHHHHHH
Q 021955 191 YNMD----S--IPAVLVIDPITGQKICSWCGM-----INPQPLGEMLLP 228 (305)
Q Consensus 191 Y~~~----~--~P~i~IIdprTGe~~~~~~G~-----~~~~~~l~~L~~ 228 (305)
|++. . .|++.|||+ .|+.+..+.|. .+.+++++.|.+
T Consensus 115 ~gv~~~~~g~~~p~~~liD~-~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 115 YALLINEWHLLARAVFVLDT-DNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp HTCBCTTTCSBCCEEEEECT-TCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred hCCccccCCceEEEEEEEcC-CCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 5553 2 399999997 69988888663 234777776653
No 235
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=96.54 E-value=0.011 Score=48.85 Aligned_cols=86 Identities=13% Similarity=-0.040 Sum_probs=52.0
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhh-ccEEEEEecCCChhH---------------------HHHHHhc
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIIS-VNFIFWQEYDDTSEG---------------------WKVCSFY 191 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~-~nFIfwq~~~ds~eg---------------------~~~~~~Y 191 (305)
.+||++|++. +.||..|..-- +.+.++.+ .++.++.++.|+++. ..++..|
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~------~~l~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~ 118 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQT------RKFNSDASKEEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENY 118 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHH------HHHHHHSCTTTSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHH
T ss_pred CCCcEEEEEECCCCCCccHHHH------HHHHHHhhcCCCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHh
Confidence 3788888888 67899886531 22333332 244455554444321 2455555
Q ss_pred CCCC------CceEEEEeCCCCeeEEEecC-----CCChHHHHHHHH
Q 021955 192 NMDS------IPAVLVIDPITGQKICSWCG-----MINPQPLGEMLL 227 (305)
Q Consensus 192 ~~~~------~P~i~IIdprTGe~~~~~~G-----~~~~~~~l~~L~ 227 (305)
++.. .|++.|||+ .|+.+..+.+ ..+.+++++.|.
T Consensus 119 gv~~~~~g~~~p~~~liD~-~G~i~~~~~~~~~~~~~~~~~il~~l~ 164 (166)
T 3p7x_A 119 GVVMEELRLLARAVFVLDA-DNKVVYKEIVSEGTDFPDFDAALAAYK 164 (166)
T ss_dssp TCEETTTTEECCEEEEECT-TCBEEEEEECSBTTSCCCHHHHHHHHH
T ss_pred CCccccCCceeeEEEEECC-CCeEEEEEEcCCcccCCCHHHHHHHHh
Confidence 5532 799999997 6998877543 235577776664
No 236
>2jy5_A Ubiquilin-1; UBA, alternative splicing, cytoplasm, nucleus, phosphoprotein, proteasome, signaling protein; NMR {Homo sapiens} PDB: 2jy6_B
Probab=96.43 E-value=0.0045 Score=42.88 Aligned_cols=40 Identities=13% Similarity=0.111 Sum_probs=35.3
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Q 021955 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAV 48 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~ 48 (305)
-.+.|.+.+++ +=.+.+.|++.|..++||++.||+..|.+
T Consensus 12 ~~~~l~~L~~M-GF~~~~~~~~AL~~t~gn~e~A~e~L~~~ 51 (52)
T 2jy5_A 12 FQQQLEQLSAM-GFLNREANLQALIATGGDINAAIERLLGS 51 (52)
T ss_dssp THHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHhC
Confidence 46789999999 44499999999999999999999988864
No 237
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=96.43 E-value=0.0025 Score=48.40 Aligned_cols=76 Identities=17% Similarity=0.117 Sum_probs=50.2
Q ss_pred EEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCCh
Q 021955 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINP 219 (305)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~ 219 (305)
+|.+..+||.+|+++. +.+.+. ...+ |..+|++. ...++..|++. .|+|.+ ..|+.+. |..++
T Consensus 3 vv~f~a~~C~~C~~~~------~~L~~~-~~~~-~~~vdid~--~~~l~~~~g~~-vPtl~~---~~G~~v~---g~~~~ 65 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAV------EALAQA-RAGA-FFSVFIDD--DAALESAYGLR-VPVLRD---PMGRELD---WPFDA 65 (87)
T ss_dssp EEEEECSSCHHHHHHH------HHHHHT-TCCC-EEEEECTT--CHHHHHHHTTT-CSEEEC---TTCCEEE---SCCCH
T ss_pred EEEEECCCCchHHHHH------HHHHHH-HHhh-eEEEECCC--CHHHHHHhCCC-cCeEEE---ECCEEEe---CCCCH
Confidence 6778899999999884 222322 2322 35566664 33578889997 999987 3588763 77888
Q ss_pred HHHHHHHHHHHhh
Q 021955 220 QPLGEMLLPFMDR 232 (305)
Q Consensus 220 ~~~l~~L~~fl~~ 232 (305)
+++.+.|...++.
T Consensus 66 ~~L~~~l~~~~~~ 78 (87)
T 1ttz_A 66 PRLRAWLDAAPHA 78 (87)
T ss_dssp HHHHHHHHTCC--
T ss_pred HHHHHHHHHHHHH
Confidence 8766666655443
No 238
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=96.42 E-value=0.0069 Score=53.95 Aligned_cols=93 Identities=6% Similarity=-0.036 Sum_probs=62.4
Q ss_pred HHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhcc---EEEEEecCC-----------------------------
Q 021955 133 LAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN---FIFWQEYDD----------------------------- 180 (305)
Q Consensus 133 k~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~n---FIfwq~~~d----------------------------- 180 (305)
....|..++.+.+.+|..|+.|.. .+..++++. |++..+..-
T Consensus 94 ~~~ak~~v~~F~D~~Cp~C~~~~~------~l~~~~~~g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~ 167 (241)
T 1v58_A 94 KKDAPVIVYVFADPFCPYCKQFWQ------QARPWVDSGKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGG 167 (241)
T ss_dssp CTTCSEEEEEEECTTCHHHHHHHH------HHHHHHHTTSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTT
T ss_pred CCCCCeEEEEEECCCChhHHHHHH------HHHHHHhCCcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhc
Confidence 345688899999999999999954 456676652 333333210
Q ss_pred ----------C-------hhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021955 181 ----------T-------SEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (305)
Q Consensus 181 ----------s-------~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~ 233 (305)
+ .+..++++.|++...|+++|.+. +|+. .++.|+.++++|.+.|...+.++
T Consensus 168 ~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~-~G~~-~~~~G~~~~~~L~~~l~~~~~~~ 235 (241)
T 1v58_A 168 KLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSK-ENTL-QQAVGLPDQKTLNIIMGNKLQHH 235 (241)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEET-TTEE-EEEESSCCHHHHHHHTTC-----
T ss_pred cCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECC-CCCE-EEecCCCCHHHHHHHHHHHHHhh
Confidence 0 02235677889999999999885 5753 56789999998887777666543
No 239
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=96.37 E-value=0.019 Score=47.53 Aligned_cols=86 Identities=7% Similarity=0.039 Sum_probs=63.0
Q ss_pred HHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc----cEEEEEecCCC---------------------------
Q 021955 133 LAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV----NFIFWQEYDDT--------------------------- 181 (305)
Q Consensus 133 k~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~----nFIfwq~~~ds--------------------------- 181 (305)
....|..+|.+.+.+|..|..+. +.+.+++++ .|++..+....
T Consensus 19 ~~~a~v~i~~f~d~~Cp~C~~~~------~~l~~l~~~~~~v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf 92 (175)
T 3gyk_A 19 NPEGDVTVVEFFDYNCPYCRRAM------AEVQGLVDADPNVRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALM 92 (175)
T ss_dssp CTTCSEEEEEEECTTCHHHHHHH------HHHHHHHHHCTTEEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHH
T ss_pred CCCCCEEEEEEECCCCccHHHHH------HHHHHHHHhCCCEEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 34689999999999999999995 456666653 46666554321
Q ss_pred --------------------------------------hhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHH
Q 021955 182 --------------------------------------SEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLG 223 (305)
Q Consensus 182 --------------------------------------~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l 223 (305)
....++++.|++...|+++| .|+ .+.|..+.+.|.
T Consensus 93 ~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i----~g~---~~~G~~~~~~l~ 165 (175)
T 3gyk_A 93 GMSGKANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV----EDA---LVPGFVEQSQLQ 165 (175)
T ss_dssp TCSSCCSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE----TTE---EECSCCCHHHHH
T ss_pred hcCCCCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE----CCE---EeeCCCCHHHHH
Confidence 12334667889999999986 354 457999999998
Q ss_pred HHHHHHHh
Q 021955 224 EMLLPFMD 231 (305)
Q Consensus 224 ~~L~~fl~ 231 (305)
+.|.+.++
T Consensus 166 ~~i~~~l~ 173 (175)
T 3gyk_A 166 DAVDRARK 173 (175)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88887765
No 240
>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=96.36 E-value=0.0061 Score=43.70 Aligned_cols=45 Identities=11% Similarity=0.199 Sum_probs=41.6
Q ss_pred CchhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021955 4 ESIDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (305)
Q Consensus 4 ~s~~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 50 (305)
+|..+.+.|.+.+++ |-+.+.|+.-|+++++|+|.|++=-|.+.+
T Consensus 15 ls~se~e~V~~LvsM--GFs~~qA~kALKat~~NvErAaDWLFSH~D 59 (63)
T 1wgn_A 15 LSPSERQCVETVVNM--GYSYECVLRAMKKKGENIEQILDYLFAHSG 59 (63)
T ss_dssp CCHHHHHHHHHHHHH--HCCHHHHHHHHHHHCSCHHHHHHHHHHHSC
T ss_pred hCcchHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 466788999999999 899999999999999999999999999875
No 241
>1wr1_B Ubiquitin-like protein DSK2; UBA domain, UBA-ubiquitin complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=96.32 E-value=0.0059 Score=43.38 Aligned_cols=39 Identities=8% Similarity=0.010 Sum_probs=35.2
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Q 021955 9 ESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAV 48 (305)
Q Consensus 9 ~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~ 48 (305)
++.|.+.+++ +-.+.+.+++.|.+++||++.||+..|.+
T Consensus 18 ~~qi~~L~~M-GF~d~~~~~~AL~~~~gnve~Ave~L~~~ 56 (58)
T 1wr1_B 18 EHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLNG 56 (58)
T ss_dssp HHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHHT
T ss_pred HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHhC
Confidence 5689999999 55789999999999999999999999875
No 242
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=96.26 E-value=0.0019 Score=59.98 Aligned_cols=88 Identities=10% Similarity=0.049 Sum_probs=57.3
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCC-C-hhHHHHHHhcCCCCCceE
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDD-T-SEGWKVCSFYNMDSIPAV 199 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~d-s-~eg~~~~~~Y~~~~~P~i 199 (305)
.+....++.+..++.+ +|.+..+||.+|+++.. .+.++- +.+-+..++.+ . .+..++++.|++..+|++
T Consensus 185 s~~~~~~la~~l~~~~--vV~F~A~WC~~Ck~l~p------~le~lA-~~l~~Vd~d~~d~~~~~~~la~~~gI~~vPT~ 255 (291)
T 3kp9_A 185 PSPLAVGLAAHLRQIG--GTMYGAYWCPHCQDQKE------LFGAAF-DQVPYVECSPNGPGTPQAQECTEAGITSYPTW 255 (291)
T ss_dssp CCSTHHHHHHHHHHTT--CEEEECTTCHHHHHHHH------HHGGGG-GGSCEEESCSSCSSSCCCHHHHTTTCCSTTEE
T ss_pred CCHHHHHHHHHhCCCC--EEEEECCCCHHHHHHHH------HHHHHH-HHcCEEEEeecCchhhHHHHHHHcCCcccCeE
Confidence 3445555555555554 68899999999999943 233222 23334555532 2 336789999999999996
Q ss_pred EEEeCCCCeeEEEecCCCChHHHHHH
Q 021955 200 LVIDPITGQKICSWCGMINPQPLGEM 225 (305)
Q Consensus 200 ~IIdprTGe~~~~~~G~~~~~~~l~~ 225 (305)
.+ .|+. +.|..+.+++.+.
T Consensus 256 ~i----~G~~---~~G~~~~~~L~~~ 274 (291)
T 3kp9_A 256 II----NGRT---YTGVRSLEALAVA 274 (291)
T ss_dssp EE----TTEE---EESCCCHHHHHHH
T ss_pred EE----CCEE---ecCCCCHHHHHHH
Confidence 55 4764 7898887764443
No 243
>1vej_A Riken cDNA 4931431F19; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=96.25 E-value=0.0091 Score=44.49 Aligned_cols=42 Identities=14% Similarity=0.169 Sum_probs=37.1
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021955 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 50 (305)
-+++|.+.+++ +-.+.+.+++.|.+++||++.||+..|.+.+
T Consensus 29 ye~qi~qL~eM-GF~dr~~~~~AL~~t~Gnve~Ave~L~~~~~ 70 (74)
T 1vej_A 29 YQQELEELKAL-GFANRDANLQALVATDGDIHAAIEMLLGASG 70 (74)
T ss_dssp SHHHHHHHHHH-TCCCHHHHHHHHHHTTSCHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHhCCC
Confidence 46789999999 5568999999999999999999999998654
No 244
>2l2d_A OTU domain-containing protein 7A; UBA fold, structural genomics, PSI-biology, protein structur initiative, northeast structural genomics consortium; NMR {Homo sapiens}
Probab=96.23 E-value=0.0069 Score=43.68 Aligned_cols=43 Identities=23% Similarity=0.393 Sum_probs=38.8
Q ss_pred CchhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021955 4 ESIDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFA 47 (305)
Q Consensus 4 ~s~~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~ 47 (305)
++-+.+..|..|+-- ||+++-.||.+|+--||||..|++.|=.
T Consensus 13 mt~dmdavls~fvrs-tgaepgLaRDlleGKnWDl~AAL~D~eq 55 (73)
T 2l2d_A 13 MTLDMDAVLSDFVRS-TGAEPGLARDLLEGKNWDLTAALSDYEQ 55 (73)
T ss_dssp SSCCHHHHHHHHHHH-HCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHh-cCCCcchhHHhhccCCccHhHHhhhHHH
Confidence 345788999999999 9999999999999999999999999844
No 245
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=96.16 E-value=0.0079 Score=48.02 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=37.4
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021955 9 ESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (305)
Q Consensus 9 ~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 50 (305)
++.|.+.+++ +-.+.+.+++.|.+++||++.||+..|+.+.
T Consensus 67 ~~qL~qL~eM-GF~d~~~ni~AL~~t~Gdve~AVe~L~~~~~ 107 (108)
T 2cwb_A 67 QPQLQQLRDM-GIQDDELSLRALQATGGDIQAALELIFAGGA 107 (108)
T ss_dssp HHHHHHHHTT-TCCCHHHHHHHHHHHTSCHHHHHHHHHHTSC
T ss_pred HHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHhcCC
Confidence 6799999999 7779999999999999999999999998653
No 246
>1wiv_A UBP14, ubiquitin-specific protease 14; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=96.14 E-value=0.011 Score=43.91 Aligned_cols=42 Identities=19% Similarity=0.247 Sum_probs=38.2
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021955 7 DKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (305)
Q Consensus 7 ~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 50 (305)
-..++|.+.+++ |-+.+.|++-|.+++||++.|++-.|++.+
T Consensus 28 ~~~~~v~~L~~M--GF~~~~a~~AL~~t~~nve~Ave~L~~~~~ 69 (73)
T 1wiv_A 28 IDQSSVDTLLSF--GFAEDVARKALKASGGDIEKATDWVFNNSG 69 (73)
T ss_dssp SCHHHHHHHHHH--TCCHHHHHHHHHHTTSCHHHHHHHHHHSCC
T ss_pred CCHHHHHHHHHc--CCCHHHHHHHHHHhCCCHHHHHHHHHhCCC
Confidence 457789999999 899999999999999999999999998654
No 247
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=96.09 E-value=0.0071 Score=49.99 Aligned_cols=74 Identities=19% Similarity=0.057 Sum_probs=47.8
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhh--ccEEEEEecCCChhH---------------------HHHHHh
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSEG---------------------WKVCSF 190 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~--~nFIfwq~~~ds~eg---------------------~~~~~~ 190 (305)
.+||++|++. ..||..|..-- +.+.++.+ .++.++.++.|+++. ..+++.
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~------~~l~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 115 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSV------RKFNQQAAKLSNTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALHSQ 115 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHH------HHHHHHHHHSTTEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHHHHH
T ss_pred CCCeEEEEEECCCCCCccHHHH------HHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchHHHH
Confidence 4799999998 78999997542 22333222 456666666655432 234445
Q ss_pred cCCCC---------CceEEEEeCCCCeeEEEecC
Q 021955 191 YNMDS---------IPAVLVIDPITGQKICSWCG 215 (305)
Q Consensus 191 Y~~~~---------~P~i~IIdprTGe~~~~~~G 215 (305)
|.+.. .|++.|||+ .|+.+..+.|
T Consensus 116 ~gv~~~~~~~~g~~~p~~~liD~-~G~i~~~~~~ 148 (165)
T 1q98_A 116 LGVDIQTGPLAGLTSRAVIVLDE-QNNVLHSQLV 148 (165)
T ss_dssp TTCEECSSTTTTSBCCEEEEECT-TSBEEEEEEC
T ss_pred hCceecccccCCccceeEEEEcC-CCEEEEEEeC
Confidence 55421 499999997 6998888764
No 248
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=96.04 E-value=0.019 Score=49.46 Aligned_cols=85 Identities=18% Similarity=0.036 Sum_probs=56.0
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhh--ccEEEEEecCCChhHH---------------------HHHHh
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSEGW---------------------KVCSF 190 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~--~nFIfwq~~~ds~eg~---------------------~~~~~ 190 (305)
.+|+++|++. +.||..|..-- +.+.++.+ .++.++.++.|+++.. .+++.
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~------~~l~~l~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~ 150 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASV------RKFNQLAGELENTVVLCISSDLPFAQSRFCGAEGLSNVITLSTLRGADFKQA 150 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHH------HHHHHHHHTSTTEEEEEEESSCHHHHTTCTTTTTCTTEEEEETTSCTHHHHH
T ss_pred CCCcEEEEEECCCCCchhHHHH------HHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHcCCCCceEEecCchHHHHHH
Confidence 4899999998 67999997653 33444433 4678888877765422 34444
Q ss_pred cCCC---------CCceEEEEeCCCCeeEEEecCC-----CChHHHHHHH
Q 021955 191 YNMD---------SIPAVLVIDPITGQKICSWCGM-----INPQPLGEML 226 (305)
Q Consensus 191 Y~~~---------~~P~i~IIdprTGe~~~~~~G~-----~~~~~~l~~L 226 (305)
|.+. ..|++.|||+ .|+.+..+.+. .+.+++++.|
T Consensus 151 ygv~~~~~~~~g~~~p~~~lID~-~G~I~~~~~~~~~~~~~~~~~~l~~L 199 (200)
T 3zrd_A 151 YGVAITEGPLAGLTARAVVVLDG-QDNVIYSELVNEITTEPNYDAALAAL 199 (200)
T ss_dssp TTCEECSSTTTTSBCCEEEEECT-TSBEEEEEECSBTTSCCCHHHHHHHH
T ss_pred hCceeecccCCCccccEEEEECC-CCeEEEEEecCCcccCCCHHHHHHhh
Confidence 5442 2599999997 69988876432 3556666554
No 249
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=96.04 E-value=0.025 Score=50.23 Aligned_cols=86 Identities=12% Similarity=0.125 Sum_probs=61.3
Q ss_pred HHcCCeEEEEeecCC--CccchhhhhccCCCHHHHHHhhcc--------EEEEEecCCChhHHHHHHhcCCCCCceEEEE
Q 021955 133 LAQDKWLLVNLQSTK--EFSSLMLNRDTWGNEAVSQIISVN--------FIFWQEYDDTSEGWKVCSFYNMDSIPAVLVI 202 (305)
Q Consensus 133 k~~~KwLLVniq~~~--~f~c~~lnRDvw~n~~V~~~i~~n--------FIfwq~~~ds~eg~~~~~~Y~~~~~P~i~II 202 (305)
++-.++|+|.+...| |..|+.| .+.+.++-+.+ ..|..++.+ +...+++.|++..+|+++|+
T Consensus 22 ~~~~~pv~v~~~~~~~~c~~c~~~------~~~l~ela~~~~~~~~~~~v~~~~vd~d--~~~~~~~~~gv~~~Pt~~i~ 93 (243)
T 2hls_A 22 AEMVNPVEVHVFLSKSGCETCEDT------LRLMKLFEEESPTRNGGKLLKLNVYYRE--SDSDKFSEFKVERVPTVAFL 93 (243)
T ss_dssp TTCCSCEEEEEEECSSSCTTHHHH------HHHHHHHHHHSCEETTEESEEEEEEETT--TTHHHHHHTTCCSSSEEEET
T ss_pred HhCCCCEEEEEEeCCCCCCchHHH------HHHHHHHHHhccCCCCCceeEEEEecCC--cCHHHHHhcCCCcCCEEEEE
Confidence 345689999999998 9999988 44455544332 455556554 44679999999999999998
Q ss_pred eCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 203 DPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 203 dprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
+ | ...+.|.....++...+..+++
T Consensus 94 ~---g--~~~~~G~~~~~~l~~fv~~~l~ 117 (243)
T 2hls_A 94 G---G--EVRWTGIPAGEEIRALVEVIMR 117 (243)
T ss_dssp T---T--TEEEESCCCTTHHHHHHHHHHH
T ss_pred C---C--ceeEcCCCcHHHHHHHHHHHHh
Confidence 3 5 5557787666666666666665
No 250
>2dkl_A Trinucleotide repeat containing 6C protein; TNRC6C, KIAA1582 protein, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=96.03 E-value=0.01 Score=45.30 Aligned_cols=40 Identities=20% Similarity=0.291 Sum_probs=37.2
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021955 9 ESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (305)
Q Consensus 9 ~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 50 (305)
.++|.+++++ |-+.+.|++.|..++||+|.|++-.|++..
T Consensus 22 ~~~I~qL~~M--GF~~~~a~~AL~~~n~n~e~A~ewL~~h~~ 61 (85)
T 2dkl_A 22 SRLIKQLTDM--GFPREPAEEALKSNNMNLDQAMSALLEKKV 61 (85)
T ss_dssp HHHHHHHHHH--TCCHHHHHHHHHHTTSCHHHHHHHHHTTSC
T ss_pred HHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHHCcC
Confidence 7789999999 899999999999999999999999998754
No 251
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=96.00 E-value=0.021 Score=47.11 Aligned_cols=78 Identities=8% Similarity=-0.143 Sum_probs=45.9
Q ss_pred cCCeEEEEee-cCCCccch-hhhhccCCCHHHHHHhhccEE-EEEecCCChhH---------------------HHHHHh
Q 021955 135 QDKWLLVNLQ-STKEFSSL-MLNRDTWGNEAVSQIISVNFI-FWQEYDDTSEG---------------------WKVCSF 190 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~-~lnRDvw~n~~V~~~i~~nFI-fwq~~~ds~eg---------------------~~~~~~ 190 (305)
.+||++|++. .+||..|. .--..+ ++...+|-+.++. ++.++.|+++. ..+++.
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l--~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGF--IEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYTHA 111 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHH--HHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHHHH
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHH--HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHHHH
Confidence 5899999999 89999998 221111 1112222223455 55555554321 234455
Q ss_pred cCCC-----------CCceEEEEeCCCCeeEEEecCC
Q 021955 191 YNMD-----------SIPAVLVIDPITGQKICSWCGM 216 (305)
Q Consensus 191 Y~~~-----------~~P~i~IIdprTGe~~~~~~G~ 216 (305)
|.+. ..|++.||| .|+....+.|.
T Consensus 112 ~gv~~~~~~~g~~~~~~p~~~vid--~G~i~~~~~~~ 146 (162)
T 1tp9_A 112 LGLELDLQEKGLGTRSRRFALLVD--DLKVKAANIEG 146 (162)
T ss_dssp TTCEEEETTTTSEEEECCEEEEEE--TTEEEEEEECS
T ss_pred cCcccccccCCCCccceeEEEEEE--CCEEEEEEeeC
Confidence 5553 268888888 68887776553
No 252
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=95.85 E-value=0.03 Score=49.13 Aligned_cols=89 Identities=9% Similarity=-0.100 Sum_probs=54.6
Q ss_pred cCCeEEEEee-cCCCccch-hhhhccCCCHHHHHHhhccE-EEEEecCCChhH-H-------------------HHHHhc
Q 021955 135 QDKWLLVNLQ-STKEFSSL-MLNRDTWGNEAVSQIISVNF-IFWQEYDDTSEG-W-------------------KVCSFY 191 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~-~lnRDvw~n~~V~~~i~~nF-Ifwq~~~ds~eg-~-------------------~~~~~Y 191 (305)
.+||++|++. .+||..|. .--..+ ++...+|-..++ .++.++.|+++. . .+++.|
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l--~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 109 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRY--NELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGM 109 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHH--HHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHH--HHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHh
Confidence 5899999998 99999998 321111 122233334466 677777666432 2 234445
Q ss_pred CCC-----------CCceEEEEeCCCCeeEEEecCC---------CChHHHHHHHH
Q 021955 192 NMD-----------SIPAVLVIDPITGQKICSWCGM---------INPQPLGEMLL 227 (305)
Q Consensus 192 ~~~-----------~~P~i~IIdprTGe~~~~~~G~---------~~~~~~l~~L~ 227 (305)
.+. ..|+..|| + .|.....+.|. .+++++++.|.
T Consensus 110 gv~~~~~~~g~~~~~~p~t~li-~-~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~ 163 (241)
T 1nm3_A 110 GMLVGKEDLGFGKRSWRYSMLV-K-NGVVEKMFIEPNEPGDPFKVSDADTMLKYLA 163 (241)
T ss_dssp TCEEECTTTTCCEEECCEEEEE-E-TTEEEEEEECCSCSSCCCSSSSHHHHHHHHC
T ss_pred CceeecccccCcccceeEEEEE-E-CCEEEEEEEeccCCCccceecCHHHHHHHhh
Confidence 542 34888888 5 79988887764 24566555543
No 253
>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.84 E-value=0.0091 Score=42.85 Aligned_cols=43 Identities=23% Similarity=0.311 Sum_probs=38.7
Q ss_pred hhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021955 6 IDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (305)
Q Consensus 6 ~~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 50 (305)
.-..++|.+.+++ |-+.+.|++-|..++||+|.|++-.|++.+
T Consensus 7 ~~~~~~v~~L~~M--GF~~~~a~~AL~~t~~nve~A~e~L~~~~~ 49 (63)
T 2dak_A 7 GPPEDCVTTIVSM--GFSRDQALKALRATNNSLERAVDWIFSHID 49 (63)
T ss_dssp CCCHHHHHHHHHH--TCCHHHHHHHHHHTTSCSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 3467899999999 899999999999999999999999998654
No 254
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=95.79 E-value=0.029 Score=49.98 Aligned_cols=92 Identities=11% Similarity=-0.031 Sum_probs=58.7
Q ss_pred CC-eEEEEee-cCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhH---------------------------HH
Q 021955 136 DK-WLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG---------------------------WK 186 (305)
Q Consensus 136 ~K-wLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg---------------------------~~ 186 (305)
+| |++|+++ .+||+.|..--..+ .....+|-+.++-++.++.|+.+. ..
T Consensus 28 Gk~~vvL~f~pa~~cpvC~~el~~l--~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~ 105 (233)
T 2v2g_A 28 GNSWGVLFSHPRDFTPVSTTELGRV--IQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRE 105 (233)
T ss_dssp CSSEEEEEECSCSSCHHHHHHHHHH--HHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCH
T ss_pred CCCeEEEEEECCCCCCCcHHHHHHH--HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHH
Confidence 45 9999998 78999997543222 222233334567777777666432 12
Q ss_pred HHHhcCCC------------CCceEEEEeCCCCeeEEEecCC----CChHHHHHHHHHHH
Q 021955 187 VCSFYNMD------------SIPAVLVIDPITGQKICSWCGM----INPQPLGEMLLPFM 230 (305)
Q Consensus 187 ~~~~Y~~~------------~~P~i~IIdprTGe~~~~~~G~----~~~~~~l~~L~~fl 230 (305)
+++.|.+. ..|.+.|||| .|+....+.|. .+.++++..|....
T Consensus 106 va~~ygv~~~~~~~~~g~~~~~p~~fiID~-~G~I~~~~~~~~~~gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 106 LAVKLGMVDPDERTSTGMPLTCRAVFIIGP-DKKLKLSILYPATTGRNFSEILRVIDSLQ 164 (233)
T ss_dssp HHHHTTCEEEEEECTTCCEEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHhCCcCcccccCCCcccccceEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 34445442 4799999997 68887776543 35788887777654
No 255
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=95.69 E-value=0.03 Score=48.63 Aligned_cols=82 Identities=11% Similarity=0.206 Sum_probs=57.2
Q ss_pred HcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCC--C----------------------------
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDD--T---------------------------- 181 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~d--s---------------------------- 181 (305)
...|..+|.+.+.||..|+.|... +.++.+. .+++..+... .
T Consensus 84 ~~~k~~vv~F~d~~Cp~C~~~~~~------l~~~~~~~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~ 157 (211)
T 1t3b_A 84 KNEKHVVTVFMDITCHYCHLLHQQ------LKEYNDLGITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNL 157 (211)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHTT------HHHHHHTTEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCC
T ss_pred CCCCEEEEEEECCCCHhHHHHHHH------HHHHHhCCcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCC
Confidence 357899999999999999999654 5555543 3444333321 0
Q ss_pred ----------hhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHH
Q 021955 182 ----------SEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLL 227 (305)
Q Consensus 182 ----------~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~ 227 (305)
.+..++++.|++...|+++|. .|+ .+.|..++++|.+.|.
T Consensus 158 ~~~~~~~~~v~~~~~l~~~~gV~gTPt~vi~---nG~---~~~G~~~~~~l~~~l~ 207 (211)
T 1t3b_A 158 PKEVKTPNIVKKHYELGIQFGVRGTPSIVTS---TGE---LIGGYLKPADLLRALE 207 (211)
T ss_dssp CSSCCCSSHHHHHHHHHHHHTCCSSCEEECT---TSC---CCCSCCCHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHcCCCcCCEEEEe---CCE---EecCCCCHHHHHHHHH
Confidence 133567788999999999883 465 4679888887766654
No 256
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=95.60 E-value=0.055 Score=50.45 Aligned_cols=87 Identities=15% Similarity=0.175 Sum_probs=59.8
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhh---ccEEEEEecCCChhHH-------------------HHHHhc
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIIS---VNFIFWQEYDDTSEGW-------------------KVCSFY 191 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~---~nFIfwq~~~ds~eg~-------------------~~~~~Y 191 (305)
.+||+++|++ ..+++.|.. ++.+|-+ +++.++.++.|+++.. ++++.|
T Consensus 23 ~Gk~vvl~F~p~~~tp~C~~---------e~~~~~~~~~~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~~~y 93 (322)
T 4eo3_A 23 YGKYTILFFFPKAGTSGSTR---------EAVEFSRENFEKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILHEFF 93 (322)
T ss_dssp TTSEEEEEECSSTTSHHHHH---------HHHHHHHSCCTTEEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHHHHT
T ss_pred CCCeEEEEEECCCCCCCCHH---------HHHHHHHHhhCCCEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHHHhc
Confidence 4899999998 345666742 2233322 3567778887775433 355566
Q ss_pred CC----CCCceEEEEeCCCCeeEEEecCCC---ChHHHHHHHHHHHh
Q 021955 192 NM----DSIPAVLVIDPITGQKICSWCGMI---NPQPLGEMLLPFMD 231 (305)
Q Consensus 192 ~~----~~~P~i~IIdprTGe~~~~~~G~~---~~~~~l~~L~~fl~ 231 (305)
.+ ..+|+..|||+ .|...++|.+.. .++++++.|..+.+
T Consensus 94 gv~~~~~~~r~tfiId~-~G~i~~~~~~v~~~~h~~~~l~~~~~~~~ 139 (322)
T 4eo3_A 94 NVLENGKTVRSTFLIDR-WGFVRKEWRRVKVEGHVQEVKEALDRLIE 139 (322)
T ss_dssp TCEETTEECCEEEEECT-TSBEEEEEESCCSTTHHHHHHHHHHHHHH
T ss_pred CCCCCCcCccEEEEECC-CCEEEEEEeCCCccccHHHHHHHHhhhch
Confidence 66 35789999997 699988998742 36888888888865
No 257
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.60 E-value=0.075 Score=52.34 Aligned_cols=80 Identities=11% Similarity=0.036 Sum_probs=58.6
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHh--hccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEE
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII--SVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICS 212 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i--~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~ 212 (305)
.++..++.+..+||.+|+++.. .+.++. +.+..|..++.+ +...++..|++.+.|++.| .|+.+.
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~------~l~~~a~~~~~v~~~~vd~~--~~~~~~~~~~i~svPt~~i----~g~~~~- 182 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQ------ALNLMAVLNPRIKHTAIDGG--TFQNEITERNVMGVPAVFV----NGKEFG- 182 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHH------HHHHHHHHCTTEEEEEEETT--TCHHHHHHTTCCSSSEEEE----TTEEEE-
T ss_pred CCCcceEEEECCCCcCcHHHHH------HHHHHHhHcCceEEEEEech--hhHHHHHHhCCCccCEEEE----CCEEEe-
Confidence 4667788888999999999853 333332 236777777655 5667999999999999976 577664
Q ss_pred ecCCCChHHHHHHHHH
Q 021955 213 WCGMINPQPLGEMLLP 228 (305)
Q Consensus 213 ~~G~~~~~~~l~~L~~ 228 (305)
.|..+.+++++.|..
T Consensus 183 -~G~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 183 -QGRMTLTEIVAKVDT 197 (521)
T ss_dssp -ESCCCHHHHHHHHCC
T ss_pred -cCCCCHHHHHHHHhh
Confidence 488888887766543
No 258
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=95.46 E-value=0.16 Score=45.17 Aligned_cols=87 Identities=13% Similarity=0.090 Sum_probs=58.6
Q ss_pred cCCeEEEEeecCC-Cccch---------hhhhccCCCHHHHHHhhccEEEEEecCCChh---------------------
Q 021955 135 QDKWLLVNLQSTK-EFSSL---------MLNRDTWGNEAVSQIISVNFIFWQEYDDTSE--------------------- 183 (305)
Q Consensus 135 ~~KwLLVniq~~~-~f~c~---------~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~e--------------------- 183 (305)
.+||++|+++..| |+.|. .|++. | .++.++.++.|+++
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~-~----------~gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLsD~~ 115 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS-W----------PHLKLIVITVDSPSSLARARHEHGLPNIALLSTLR 115 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT-C----------TTSEEEEEESSCHHHHHHHHHHHCCTTCEEEESTT
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH-c----------CCCEEEEEECCCHHHHHHHHHHcCCCCceEEEcCC
Confidence 3789999999877 89997 22222 1 34555555555432
Q ss_pred HHHHHHhcCCCC---------CceEEEEeCCCCeeEEEec-----CCCChHHHHHHHHHHHhhC
Q 021955 184 GWKVCSFYNMDS---------IPAVLVIDPITGQKICSWC-----GMINPQPLGEMLLPFMDRS 233 (305)
Q Consensus 184 g~~~~~~Y~~~~---------~P~i~IIdprTGe~~~~~~-----G~~~~~~~l~~L~~fl~~~ 233 (305)
...+++.|.+.. .|++.|||+ .|.....|. +..+.+++++.|.......
T Consensus 116 ~~~vak~yGv~~~~~~~~G~~~p~tfvID~-dG~I~~~~~~~~~~~~pd~~evl~~L~~l~~~~ 178 (224)
T 3keb_A 116 GRDFHKRYGVLITEYPLSGYTSPAIILADA-ANVVHYSERLANTRDFFDFDAIEKLLQEGEQQA 178 (224)
T ss_dssp CTTHHHHTTCBCCSTTSTTCBCCEEEEECT-TCBEEEEEECSBTTCCCCHHHHHHHHHHHHHHC
T ss_pred chHHHHHhCCccccccccCCccCEEEEEcC-CCEEEEEEecCCCCCCCCHHHHHHHHHHhhhcc
Confidence 234566666632 699999997 688887753 2357899999998876654
No 259
>2dna_A Unnamed protein product; ubiquitin associated domain, DSK2 protein, proteasome, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=95.35 E-value=0.043 Score=40.06 Aligned_cols=42 Identities=12% Similarity=0.031 Sum_probs=37.4
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCCC
Q 021955 9 ESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNEA 51 (305)
Q Consensus 9 ~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~~ 51 (305)
...|.+.+++ +-.+.+.+++.|.++++|++.||+..|.+.+.
T Consensus 20 ~~ql~qL~~M-GF~d~~an~~AL~at~Gnve~Ave~L~~~~~~ 61 (67)
T 2dna_A 20 SKEMECLQAM-GFVNYNANLQALIATDGDTNAAIYKLKSSQGF 61 (67)
T ss_dssp HHHHHHHHHH-TCCCHHHHHHHHHHTTSCHHHHHHHHHHCCSS
T ss_pred HHHHHHHHHc-CCCcHHHHHHHHHHcCCCHHHHHHHHHhCCCc
Confidence 4589999999 66888888999999999999999999997654
No 260
>2cp8_A NEXT to BRCA1 gene 1 protein; UBA domain, structural genomics, human, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=95.31 E-value=0.029 Score=39.23 Aligned_cols=46 Identities=7% Similarity=0.151 Sum_probs=39.9
Q ss_pred chhhHH-HHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCCC
Q 021955 5 SIDKES-RISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNEA 51 (305)
Q Consensus 5 s~~~~~-~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~~ 51 (305)
+.++.. ++.++.++ +=.|.+.-++.|..+||||+.||...+..+.+
T Consensus 5 ~ee~~a~~L~~L~eM-GF~D~~~N~~aL~~~~gnv~~aI~~Ll~~~~~ 51 (54)
T 2cp8_A 5 SSGQTAALMAHLFEM-GFCDRQLNLRLLKKHNYNILQVVTELLQLSGP 51 (54)
T ss_dssp SCTTHHHHHHHHHHH-TCCCHHHHHHHHTTTTTCHHHHHHHHHHHSSS
T ss_pred HHHhhHHHHHHHHHc-CCCcHHHHHHHHHHcCCCHHHHHHHHHhccCC
Confidence 345555 89999999 77899999999999999999999999987654
No 261
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=95.30 E-value=0.034 Score=38.46 Aligned_cols=37 Identities=11% Similarity=0.139 Sum_probs=34.3
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021955 9 ESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFA 47 (305)
Q Consensus 9 ~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~ 47 (305)
.+.|.+.|++ |-|.+.|++-|..++||+|.|.+.-.+
T Consensus 12 ~~~Ia~Lm~m--GFsr~~ai~AL~~a~nnve~AaniLle 48 (52)
T 2ooa_A 12 DAKIAKLMGE--GYAFEEVKRALEIAQNNVEVARSILRE 48 (52)
T ss_dssp HHHHHHHHHT--TCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHc--CCCHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 4899999999 999999999999999999999987665
No 262
>1jkg_B TAP; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_B 1go5_A
Probab=95.28 E-value=0.003 Score=57.32 Aligned_cols=46 Identities=17% Similarity=0.314 Sum_probs=0.0
Q ss_pred CchhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021955 4 ESIDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (305)
Q Consensus 4 ~s~~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 50 (305)
.+..++++|.+|+.. ||-+.+-|..+|+.+|||++.|+..|-+...
T Consensus 194 ~~~~q~~~v~~~~~~-T~mn~~~s~~cL~~~~Wd~~~A~~~F~~l~~ 239 (250)
T 1jkg_B 194 LSPEQQEMLQAFSTQ-SGMNLEWSQKCLQDNNWDYTRSAQAFTHLKA 239 (250)
T ss_dssp -----------------------------------------------
T ss_pred CCHHHHHHHHHHHHH-hCCCHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 355677899999999 9999999999999999999999999977543
No 263
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=95.17 E-value=0.028 Score=40.75 Aligned_cols=60 Identities=13% Similarity=0.091 Sum_probs=41.4
Q ss_pred EEEeecCCCccchhhhhccCCCHHHHHHhhcc---EEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeE
Q 021955 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN---FIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKI 210 (305)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~n~~V~~~i~~n---FIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~ 210 (305)
++.+..+||..|+.+. +.+.++++++ |.+..++.+ .+...++..|++.++|+|.| .|+.+
T Consensus 4 ~~~f~~~~C~~C~~~~------~~l~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~gv~~vPt~~i----~g~~~ 66 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAE------QAVANAIDPSKYTVEIVHLGTD-KARIAEAEKAGVKSVPALVI----DGAAF 66 (80)
T ss_dssp EEEEEECSCHHHHHHH------HHHHHHSCTTTEEEEEEETTTC-SSTHHHHHHHTCCEEEEEEE----TTEEE
T ss_pred eEEEeCCCCCchHHHH------HHHHHHHHhcCCeEEEEEecCC-hhhHHHHHHcCCCcCCEEEE----CCEEE
Confidence 4455678999999995 4456666653 556655442 13456778999999999876 47654
No 264
>2dai_A Ubadc1, ubiquitin associated domain containing 1; UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.16 E-value=0.042 Score=41.69 Aligned_cols=41 Identities=20% Similarity=0.267 Sum_probs=38.0
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021955 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 50 (305)
..+.|.+.+++ |-+.+.|++-|..++||+|.|++-.|++.+
T Consensus 29 ~e~~i~~L~~M--GF~~~~a~~AL~~t~~nve~A~ewL~~~~~ 69 (83)
T 2dai_A 29 DEAALRQLTEM--GFPENRATKALQLNHMSVPQAMEWLIEHAE 69 (83)
T ss_dssp CHHHHHHHHHH--TCCHHHHHHHHHHTTSCHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHhCCCHHHHHHHHHHCCC
Confidence 56889999999 999999999999999999999999999754
No 265
>1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1
Probab=95.11 E-value=0.033 Score=40.09 Aligned_cols=41 Identities=17% Similarity=0.246 Sum_probs=37.2
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHc-CCCHHHHHHHHHhcCC
Q 021955 8 KESRISSFLEIAVGASGVTAIECLQAT-SWKLDEAILLFFAVNE 50 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A~~~Le~~-~wdLe~Av~~ff~~~~ 50 (305)
..++|.+++++ |-+.+.|++-|.++ |||+|.|++-.|++.+
T Consensus 9 ~~~~v~~L~~M--GF~~~~a~~AL~~t~~~nve~A~ewLl~~~~ 50 (64)
T 1whc_A 9 ELTALESLIEM--GFPRGRAEKALALTGNQGIEAAMDWLMEHED 50 (64)
T ss_dssp CCCHHHHHHTT--TCCHHHHHHHHHHHTSCCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHhcCCCHHHHHHHHHhCCC
Confidence 45689999999 99999999999999 7999999999999764
No 266
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=95.09 E-value=0.034 Score=43.93 Aligned_cols=76 Identities=12% Similarity=0.131 Sum_probs=52.1
Q ss_pred eEEEEeecCCCccchhhhhccCCCHHHHHHhhc-cEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecCC
Q 021955 138 WLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV-NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGM 216 (305)
Q Consensus 138 wLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~-nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~ 216 (305)
..+|.+..+||..|+.+. +.+.++..+ .+-|..+|++.. ..++..|.+. .|+|+++. .|+.+ ..|.
T Consensus 30 ~~vv~y~~~~C~~C~~a~------~~L~~l~~e~~i~~~~vDId~d--~~l~~~ygv~-VP~l~~~~--dG~~v--~~g~ 96 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMI------ASLRVLQKKSWFELEVINIDGN--EHLTRLYNDR-VPVLFAVN--EDKEL--CHYF 96 (107)
T ss_dssp CCEEEEECSSCHHHHHHH------HHHHHHHHHSCCCCEEEETTTC--HHHHHHSTTS-CSEEEETT--TTEEE--ECSS
T ss_pred cEEEEEeCCCChhHHHHH------HHHHHHHHhcCCeEEEEECCCC--HHHHHHhCCC-CceEEEEE--CCEEE--EecC
Confidence 457888899999999884 344444443 366777777743 3467789986 99997654 47765 3477
Q ss_pred CChHHHHHHH
Q 021955 217 INPQPLGEML 226 (305)
Q Consensus 217 ~~~~~~l~~L 226 (305)
.+++++.+.|
T Consensus 97 ~~~~~L~~~L 106 (107)
T 2fgx_A 97 LDSDVIGAYL 106 (107)
T ss_dssp CCCHHHHHHH
T ss_pred CCHHHHHHHh
Confidence 8888765544
No 267
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=95.03 E-value=0.15 Score=44.82 Aligned_cols=91 Identities=11% Similarity=0.027 Sum_probs=56.7
Q ss_pred CeEEEE-eecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhH-----------------------------HH
Q 021955 137 KWLLVN-LQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG-----------------------------WK 186 (305)
Q Consensus 137 KwLLVn-iq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg-----------------------------~~ 186 (305)
+|++|. +-.+||+.|..--..+ +....+|-+.++-++.++.|+.+. .+
T Consensus 32 ~~vvL~~~~a~~cp~C~~el~~l--~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~ 109 (224)
T 1prx_A 32 SWGILFSHPRDFTPVCTTELGRA--AKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRE 109 (224)
T ss_dssp SEEEEEEESCSSCHHHHHHHHHH--HHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCH
T ss_pred CeEEEEEECCCCCCCcHHHHHHH--HHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchH
Confidence 475554 4678999997543222 222233334567777777776432 13
Q ss_pred HHHhcCCC------------CCceEEEEeCCCCeeEEEecCC----CChHHHHHHHHHHH
Q 021955 187 VCSFYNMD------------SIPAVLVIDPITGQKICSWCGM----INPQPLGEMLLPFM 230 (305)
Q Consensus 187 ~~~~Y~~~------------~~P~i~IIdprTGe~~~~~~G~----~~~~~~l~~L~~fl 230 (305)
+++.|++. ..|++.|||| .|+....+.|. .+.++++..|....
T Consensus 110 va~~ygv~~~~~~~~~g~~~~~p~~fiID~-~G~I~~~~~~~~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 110 LAILLGMLDPAEKDEKGMPVTARVVFVFGP-DKKLKLSILYPATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp HHHHTTSSCSCTTCSSSCCTTCCEEEEECT-TSBEEEEEECCTTBCCCHHHHHHHHHHHH
T ss_pred HHHHhCCCCcccccCCCccccceEEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 44455552 3799999998 68888777553 36788887777665
No 268
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=94.88 E-value=0.13 Score=45.52 Aligned_cols=92 Identities=14% Similarity=0.105 Sum_probs=66.0
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhH--------------------------HHH
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG--------------------------WKV 187 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg--------------------------~~~ 187 (305)
.+||++++++ ..+|+.|..=-..+ ++...+|-+.+..++.++.|+... .++
T Consensus 51 ~GK~vVL~FyP~d~TpvCt~E~~~f--~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~v 128 (216)
T 3sbc_A 51 KGKYVVLAFIPLAFTFVSPTEIIAF--SEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSL 128 (216)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHH--HHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCcCchhhhHH--HHhHHhhccCCceEEEeecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHH
Confidence 3899999999 78999997654444 556667777899999999997543 246
Q ss_pred HHhcCC------CCCceEEEEeCCCCeeEEEec-C---CCChHHHHHHHHHH
Q 021955 188 CSFYNM------DSIPAVLVIDPITGQKICSWC-G---MINPQPLGEMLLPF 229 (305)
Q Consensus 188 ~~~Y~~------~~~P~i~IIdprTGe~~~~~~-G---~~~~~~~l~~L~~f 229 (305)
++.|.+ -.++.+.|||| .|.....|. . -.+.+++|..|..+
T Consensus 129 ak~YGv~~~~~g~~~R~tFiID~-~G~Ir~~~v~~~~~grn~dEiLr~l~Al 179 (216)
T 3sbc_A 129 SRDYGVLIEEEGVALRGLFIIDP-KGVIRHITINDLPVGRNVDEALRLVEAF 179 (216)
T ss_dssp HHHHTCEETTTTEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHcCCeeccCCceeeEEEEECC-CCeEEEEEEcCCCCCCCHHHHHHHHHHh
Confidence 667776 24688999998 577655432 1 13788888777653
No 269
>2cpw_A CBL-interacting protein STS-1 variant; ubiquitin associated domain, UBA, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=94.85 E-value=0.042 Score=39.58 Aligned_cols=40 Identities=20% Similarity=0.243 Sum_probs=36.3
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCC-CHHHHHHHHHhcCC
Q 021955 9 ESRISSFLEIAVGASGVTAIECLQATSW-KLDEAILLFFAVNE 50 (305)
Q Consensus 9 ~~~i~~F~~iTtg~~~~~A~~~Le~~~w-dLe~Av~~ff~~~~ 50 (305)
.+.|.+.+++ |-+.+.|++-|.+++| |+|.|++-.|++.+
T Consensus 20 e~~i~~L~~M--GF~~~~a~~AL~~t~~~nve~A~ewL~~~~~ 60 (64)
T 2cpw_A 20 GSALDVLLSM--GFPRARAQKALASTGGRSVQTACDWLFSHSG 60 (64)
T ss_dssp CCHHHHHHHH--TCCHHHHHHHHHHTTTSCHHHHHHHHHSCCS
T ss_pred HHHHHHHHHc--CCCHHHHHHHHHHcCCCCHHHHHHHHHhCCC
Confidence 3579999999 8999999999999999 99999999998654
No 270
>1otr_A Protein CUE2; protein-protein complex, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.4
Probab=94.78 E-value=0.051 Score=37.23 Aligned_cols=43 Identities=26% Similarity=0.256 Sum_probs=37.6
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021955 7 DKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (305)
Q Consensus 7 ~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 49 (305)
+..+.+...+++=-..+..++++.|+.++||++.||+..++..
T Consensus 3 ~~e~~v~~L~EMFP~~~~~~ik~~L~~~~Gd~d~Ai~~LL~~~ 45 (49)
T 1otr_A 3 DHESKLSILMDMFPAISKSKLQVHLLENNNDLDLTIGLLLKEN 45 (49)
T ss_dssp SHHHHHHHHHHHCSSSCHHHHHHHHHHTTTCSHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence 3467778888887889999999999999999999999998864
No 271
>2d9s_A CBL E3 ubiquitin protein ligase; UBA domain, dimer, protein binding, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=94.78 E-value=0.054 Score=37.64 Aligned_cols=40 Identities=15% Similarity=0.091 Sum_probs=36.0
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021955 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 49 (305)
-.+.|.+.|++ |-|.+.|++-|..++||+|.|.+.-.+..
T Consensus 9 ~e~~I~~L~~l--GF~r~~ai~AL~~a~nnve~Aa~iL~ef~ 48 (53)
T 2d9s_A 9 LSSEIERLMSQ--GYSYQDIQKALVIAHNNIEMAKNILREFS 48 (53)
T ss_dssp SHHHHHHHHHH--TCCHHHHHHHHHHTTTCHHHHHHHHHHHT
T ss_pred hHHHHHHHHHc--CCCHHHHHHHHHHhcCCHHHHHHHHHHhc
Confidence 34679999999 99999999999999999999999887754
No 272
>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.68 E-value=0.046 Score=36.71 Aligned_cols=39 Identities=18% Similarity=0.359 Sum_probs=35.1
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Q 021955 7 DKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAV 48 (305)
Q Consensus 7 ~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~ 48 (305)
-..+.|.+.+++ |-+.+.|++-|..+| |+|.|++-.|++
T Consensus 8 ~~~~~v~~L~~M--GF~~~~a~~AL~~~~-n~e~A~~~L~~h 46 (47)
T 2ekk_A 8 VNQQQLQQLMDM--GFTREHAMEALLNTS-TMEQATEYLLTH 46 (47)
T ss_dssp SCHHHHHHHHHH--HCCHHHHHHHHHHSC-SHHHHHHHHHTC
T ss_pred CCHHHHHHHHHc--CCCHHHHHHHHHHcC-CHHHHHHHHHcC
Confidence 357889999999 899999999999997 999999988864
No 273
>2cp9_A EF-TS, EF-TSMT, elongation factor TS, mitochondrial; UBA, structural genomics, human, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.2
Probab=94.58 E-value=0.035 Score=40.16 Aligned_cols=40 Identities=15% Similarity=0.120 Sum_probs=35.7
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021955 9 ESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (305)
Q Consensus 9 ~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 49 (305)
.++|....+. ||+....|+.-|+.+|||++.||...-..+
T Consensus 10 ~~~Vk~LRe~-TGag~~dcKkAL~e~~GDi~~Ai~~Lr~kg 49 (64)
T 2cp9_A 10 KELLMKLRRK-TGYSFVNCKKALETCGGDLKQAEIWLHKEA 49 (64)
T ss_dssp CHHHHHHHHH-HCCCHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hCCCHHHHHHHHHHcCCCHHHHHHHHHHHh
Confidence 4789999999 999999999999999999999998876543
No 274
>2dag_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5 (USP 5), UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.50 E-value=0.053 Score=40.19 Aligned_cols=42 Identities=17% Similarity=0.095 Sum_probs=37.8
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcC-CCHHHHHHHHHhcCC
Q 021955 7 DKESRISSFLEIAVGASGVTAIECLQATS-WKLDEAILLFFAVNE 50 (305)
Q Consensus 7 ~~~~~i~~F~~iTtg~~~~~A~~~Le~~~-wdLe~Av~~ff~~~~ 50 (305)
-..+.|.+.+++ |-+.+.|++-|..++ ||+|.|++-.|++.+
T Consensus 8 ~~e~~v~~L~~M--GF~~~~a~~AL~~t~n~~ve~A~ewL~~~~~ 50 (74)
T 2dag_A 8 LDESVIIQLVEM--GFPMDACRKAVYYTGNSGAEAAMNWVMSHMD 50 (74)
T ss_dssp SCHHHHHHHHHH--SCCHHHHHHHHHHHTSCCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHc--CCCHHHHHHHHHHhCCCCHHHHHHHHHhCCC
Confidence 357889999999 899999999999998 589999999999764
No 275
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=94.46 E-value=0.12 Score=44.15 Aligned_cols=86 Identities=9% Similarity=-0.003 Sum_probs=49.8
Q ss_pred cCCeEEE-EeecCCCccchh--hhhccCCCHHHHHHhhccEE-EEEecCCChhHH---------------------HHHH
Q 021955 135 QDKWLLV-NLQSTKEFSSLM--LNRDTWGNEAVSQIISVNFI-FWQEYDDTSEGW---------------------KVCS 189 (305)
Q Consensus 135 ~~KwLLV-niq~~~~f~c~~--lnRDvw~n~~V~~~i~~nFI-fwq~~~ds~eg~---------------------~~~~ 189 (305)
.+||++| ++-..||+.|.. +.. + ++...+|-..++. ++.++.|+++.. ++++
T Consensus 55 ~Gk~vvL~f~~a~wcp~C~~~e~p~-l--~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va~ 131 (184)
T 3uma_A 55 KGKRVVLFAVPGAFTPTCSLNHLPG-Y--LENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFTK 131 (184)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHH-H--HHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTCHHHH
T ss_pred CCCCEEEEEEcCCCCCCcCHHHHHH-H--HHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCchHHHH
Confidence 3676554 455899999987 321 1 1222333345566 777777765322 2444
Q ss_pred hcCCC-----------CCceEEEEeCCCCeeEEEecCC-------CChHHHHHH
Q 021955 190 FYNMD-----------SIPAVLVIDPITGQKICSWCGM-------INPQPLGEM 225 (305)
Q Consensus 190 ~Y~~~-----------~~P~i~IIdprTGe~~~~~~G~-------~~~~~~l~~ 225 (305)
.|.+. ..|+..||+ .|.....|.|. .+++++|+.
T Consensus 132 ~yGv~~~~~~~g~g~~~~r~tfiId--dG~I~~~~~~~~~g~~~~~~~~~vL~~ 183 (184)
T 3uma_A 132 AIGMEIDLSAGTLGIRSKRYSMLVE--DGVVKALNIEESPGQATASGAAAMLEL 183 (184)
T ss_dssp HTTCEEEEGGGTCEEEECCEEEEEE--TTEEEEEEECSSTTCCSTTSHHHHHHH
T ss_pred HcCCceeccccCCcccceeEEEEEC--CCEEEEEEEeCCCCCCcCCCHHHHHhh
Confidence 45542 357788885 68888887542 245555554
No 276
>1vdl_A Ubiquitin carboxyl-terminal hydrolase 25; UBA domain, mouse cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.5.2.1
Probab=94.21 E-value=0.16 Score=37.68 Aligned_cols=42 Identities=17% Similarity=0.178 Sum_probs=37.7
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021955 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 49 (305)
++-++.|..+||+..|...=.+-|+++++||..||.+.-+..
T Consensus 24 ~q~lLnQLrEITGiqD~~~L~~ALkas~Gdl~~AV~~LT~~~ 65 (80)
T 1vdl_A 24 QQTFLNQLREITGINDAQILQQALKDSNGNLELAVAFLTAKN 65 (80)
T ss_dssp HHHHHHHHHHHSCCCCHHHHHHHHHHHTSCHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHhccCCHHHHHHHHhccc
Confidence 556899999998888999999999999999999999887654
No 277
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=94.10 E-value=0.18 Score=42.46 Aligned_cols=76 Identities=7% Similarity=-0.198 Sum_probs=44.6
Q ss_pred cCCeEEEEee-cCCCccchh--hhhccCCCHHHHHHhhccEEEEE-ecCCChhHH---------------------HHHH
Q 021955 135 QDKWLLVNLQ-STKEFSSLM--LNRDTWGNEAVSQIISVNFIFWQ-EYDDTSEGW---------------------KVCS 189 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~--lnRDvw~n~~V~~~i~~nFIfwq-~~~ds~eg~---------------------~~~~ 189 (305)
.+||++|++. ..||+.|.. ++. + .+...+|-..++.++. ++.|+++.. ++++
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~-l--~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp~l~D~~~~va~ 118 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPG-F--VEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGK 118 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHH-H--HHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCEEEECTTCHHHH
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHH-H--HHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceEEEECCChHHHH
Confidence 3687766665 899999983 431 1 1222333344565554 555654321 3445
Q ss_pred hcCCC-------------CCceEEEEeCCCCeeEEEecC
Q 021955 190 FYNMD-------------SIPAVLVIDPITGQKICSWCG 215 (305)
Q Consensus 190 ~Y~~~-------------~~P~i~IIdprTGe~~~~~~G 215 (305)
.|.+. ..|...||| .|.....|.+
T Consensus 119 ~yGv~~~~~~~~~~g~~~~~r~tfvID--dG~I~~~~v~ 155 (173)
T 3mng_A 119 ETDLLLDDSLVSIFGNRRLKRFSMVVQ--DGIVKALNVE 155 (173)
T ss_dssp HHTCBCCSTTHHHHSSCCBCCEEEEEE--TTEEEEEEEC
T ss_pred HhCCCcccccccccCCcceEEEEEEEE--CCEEEEEEEe
Confidence 55542 358889998 6888777654
No 278
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=93.96 E-value=0.26 Score=43.73 Aligned_cols=96 Identities=15% Similarity=0.169 Sum_probs=67.2
Q ss_pred cCCeEEEEee-cCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhH--------------------------HHH
Q 021955 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG--------------------------WKV 187 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg--------------------------~~~ 187 (305)
.+||++++++ ..+++.|..=-.++ ++...+|-+.+..++.++.|+... ..+
T Consensus 55 ~GK~vVL~FyP~d~TpvCt~E~~~f--~~~~~eF~~~g~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~v 132 (219)
T 3tue_A 55 KGKWVVLFFYPLDFTFVCPTEVIAF--SDSVSRFNELNCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNI 132 (219)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHH--HTTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCEEEEEEecccCCCCCchhHhhH--HHHHhhhccCCcEEEEeeCCchhhHHHHhhhhHHhcCccccccccccCcccHH
Confidence 3899999999 67899886655444 556677778899999999998532 235
Q ss_pred HHhcCC------CCCceEEEEeCCCCeeEEEecC----CCChHHHHHHHHHH--HhhC
Q 021955 188 CSFYNM------DSIPAVLVIDPITGQKICSWCG----MINPQPLGEMLLPF--MDRS 233 (305)
Q Consensus 188 ~~~Y~~------~~~P~i~IIdprTGe~~~~~~G----~~~~~~~l~~L~~f--l~~~ 233 (305)
++.|.+ -.+-.+.|||| .|.....|.. .-..+++|..|... .+++
T Consensus 133 a~~yGv~~~~~g~~~R~tFiIDp-~g~Ir~~~~~~~~~gr~~~EvLr~l~aLQ~~~~~ 189 (219)
T 3tue_A 133 ARSYGVLEESQGVAYRGLFIIDP-HGMLRQITVNDMPVGRSVEEVLRLLEAFQFVEKH 189 (219)
T ss_dssp HHHTTCEETTTTEECEEEEEECT-TSBEEEEEEECTTCCCCHHHHHHHHHHHHHHHHC
T ss_pred HHHcCCcccCCCeeEEEEEEECC-CCeEEEEEEecCCCCCCHHHHHHHHHHhhhHHhc
Confidence 667766 12467899998 5876666521 13678888777653 4444
No 279
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=93.72 E-value=0.19 Score=42.18 Aligned_cols=42 Identities=12% Similarity=0.252 Sum_probs=31.8
Q ss_pred HHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 187 VCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 187 ~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
.+..+++...|+++| .|+.+....|..+.+.|.+.|...+.+
T Consensus 144 ~a~~~gv~gtPt~~v----ng~~~~~~~G~~~~e~l~~~i~~l~~k 185 (192)
T 3h93_A 144 LAMAYQVTGVPTMVV----NGKYRFDIGSAGGPEETLKLADYLIEK 185 (192)
T ss_dssp HHHHHTCCSSSEEEE----TTTEEEEHHHHTSHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCeEEE----CCEEEecccccCCHHHHHHHHHHHHHH
Confidence 345667899999976 477665555888999998888877754
No 280
>1vek_A UBP14, ubiquitin-specific protease 14, putative; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=93.34 E-value=0.13 Score=39.08 Aligned_cols=41 Identities=15% Similarity=0.234 Sum_probs=37.3
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHc-CCCHHHHHHHHHhcCC
Q 021955 8 KESRISSFLEIAVGASGVTAIECLQAT-SWKLDEAILLFFAVNE 50 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A~~~Le~~-~wdLe~Av~~ff~~~~ 50 (305)
..+.|.+.+++ |-+.+.|++.|..+ |||+|.|++-.|++.+
T Consensus 29 ~e~~v~~L~~M--GF~~~~a~~AL~~t~n~n~e~A~ewL~~h~~ 70 (84)
T 1vek_A 29 NEEIVAQLVSM--GFSQLHCQKAAINTSNAGVEEAMNWLLSHMD 70 (84)
T ss_dssp CHHHHHHHHHH--TCCHHHHHHHHHHTTTCCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 57899999999 99999999999998 5999999999999764
No 281
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=93.32 E-value=0.18 Score=35.72 Aligned_cols=43 Identities=16% Similarity=0.160 Sum_probs=37.8
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021955 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 50 (305)
.++.|.++.++=-..|.++.+..|+++++|+|.||+..++...
T Consensus 9 ~ee~l~~L~emFP~ld~~~I~~vL~a~~gdvd~aI~~LL~m~~ 51 (59)
T 1wgl_A 9 SEEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGE 51 (59)
T ss_dssp CHHHHHHHHHHCSSSCHHHHHHHHTTTTTCHHHHHHHHHHSSC
T ss_pred CHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHcCcC
Confidence 4567778887778889999999999999999999999999754
No 282
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=93.12 E-value=0.25 Score=35.41 Aligned_cols=73 Identities=10% Similarity=0.070 Sum_probs=44.9
Q ss_pred EEEeecCCCccchhhhhccCCCHHHHHHhh--ccEEEEEecCCChh--HHHHHHhcC--CCCCceEEEEeCCCCeeEEEe
Q 021955 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSE--GWKVCSFYN--MDSIPAVLVIDPITGQKICSW 213 (305)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~n~~V~~~i~--~nFIfwq~~~ds~e--g~~~~~~Y~--~~~~P~i~IIdprTGe~~~~~ 213 (305)
++.+..+||..|+.+.+ .+.++.. .++-|..++++... ...+...|+ +.++|+| +++ |+.+.
T Consensus 3 v~~f~~~~C~~C~~~~~------~l~~l~~~~~~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i-~~~---g~~i~-- 70 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKD------LAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI-FVD---QQHIG-- 70 (85)
T ss_dssp EEEECCTTSTHHHHHHH------HHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE-EET---TEEEE--
T ss_pred EEEEeCCCCCCHHHHHH------HHHHHHhcCCCceEEEEecccChHHHHHHHHHhCCCCceeCeE-EEC---CEEEE--
Confidence 55678889999999843 2333222 34666666654422 246888888 8999998 444 66542
Q ss_pred cCCCChHHHHHHHHH
Q 021955 214 CGMINPQPLGEMLLP 228 (305)
Q Consensus 214 ~G~~~~~~~l~~L~~ 228 (305)
| .+++.+.+.+
T Consensus 71 -~---~~~l~~~~~~ 81 (85)
T 1ego_A 71 -G---YTDFAAWVKE 81 (85)
T ss_dssp -S---SHHHHHHHHH
T ss_pred -C---HHHHHHHHHH
Confidence 3 2455555444
No 283
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=92.96 E-value=0.16 Score=42.36 Aligned_cols=55 Identities=11% Similarity=-0.264 Sum_probs=32.4
Q ss_pred cCCeEEEEee-cCCCccchh-hhhccCCCHHHHHHhhccE-EEEEecCCChh-HHHHHHhc
Q 021955 135 QDKWLLVNLQ-STKEFSSLM-LNRDTWGNEAVSQIISVNF-IFWQEYDDTSE-GWKVCSFY 191 (305)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~-lnRDvw~n~~V~~~i~~nF-Ifwq~~~ds~e-g~~~~~~Y 191 (305)
.+||++|++. .+||..|.. --..+ ++...+|-+.++ .++.++.|+++ ..++++.+
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l--~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~ 88 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGY--VEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAH 88 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHH--HHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHH--HHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhc
Confidence 5789999986 899999987 21111 122233434567 67777776654 23344433
No 284
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=92.88 E-value=0.33 Score=40.41 Aligned_cols=54 Identities=4% Similarity=-0.199 Sum_probs=32.1
Q ss_pred CeEEEEeecCCCccchhh-hhccCCCHHHHHHhhccEE-EEEecCCChh-HHHHHHhcC
Q 021955 137 KWLLVNLQSTKEFSSLML-NRDTWGNEAVSQIISVNFI-FWQEYDDTSE-GWKVCSFYN 192 (305)
Q Consensus 137 KwLLVniq~~~~f~c~~l-nRDvw~n~~V~~~i~~nFI-fwq~~~ds~e-g~~~~~~Y~ 192 (305)
+.||+++..+||..|..= -..+ ++...+|-..++. ++.++.++++ ..++++.++
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l--~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~ 101 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPY--KHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQ 101 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHH--HHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTT
T ss_pred CEEEEEecCCCCCCCCHHHHHHH--HHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhC
Confidence 467789999999999752 2211 1223344445677 7777777654 334454444
No 285
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=92.45 E-value=0.3 Score=42.61 Aligned_cols=92 Identities=8% Similarity=0.059 Sum_probs=56.2
Q ss_pred CC-eEEEEe-ecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhH--------------------------HHH
Q 021955 136 DK-WLLVNL-QSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG--------------------------WKV 187 (305)
Q Consensus 136 ~K-wLLVni-q~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg--------------------------~~~ 187 (305)
+| |+++.+ -.+||+.|..--..+ .....+|=+.++.++.++.|+.+. ..+
T Consensus 30 Gk~~vvL~f~~a~~cp~C~~el~~l--~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~v 107 (220)
T 1xcc_A 30 ENSWAILFSHPNDFTPVCTTELAEL--GKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESREL 107 (220)
T ss_dssp TTSEEEEECCSCTTCHHHHHHHHHH--HHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHH--HHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHH
Confidence 55 766665 578999996542221 122223334567777777766432 134
Q ss_pred HHhcCCC------------CCceEEEEeCCCCeeEEEecCC----CChHHHHHHHHHHH
Q 021955 188 CSFYNMD------------SIPAVLVIDPITGQKICSWCGM----INPQPLGEMLLPFM 230 (305)
Q Consensus 188 ~~~Y~~~------------~~P~i~IIdprTGe~~~~~~G~----~~~~~~l~~L~~fl 230 (305)
++.|.+. ..|++.|||| .|.....+.|. .+.++++..|....
T Consensus 108 a~~ygv~~~~~~~~~g~~~~~p~~flID~-~G~I~~~~~~~~~~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 108 ANKLKIMDEQEKDITGLPLTCRCLFFISP-EKKIKATVLYPATTGRNAHEILRVLKSLQ 165 (220)
T ss_dssp HHHHTCEEEEEECTTSCEEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHhCCCCcccccCCCCCcccceEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 4455551 3699999998 68887776542 36788887776654
No 286
>2lbc_A Ubiquitin carboxyl-terminal hydrolase 13; tandem UBA of USP13; NMR {Homo sapiens}
Probab=91.85 E-value=0.21 Score=40.22 Aligned_cols=41 Identities=27% Similarity=0.338 Sum_probs=37.4
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021955 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 50 (305)
..+.|.+.+++ |-+.+.|++-|..++||++.|++..|.+.+
T Consensus 78 ~e~~v~~L~~M--GF~~~~a~~AL~~~~~~~e~A~e~L~~~~~ 118 (126)
T 2lbc_A 78 PEEIVAIITSM--GFQRNQAIQALRATNNNLERALDWIFSHPE 118 (126)
T ss_dssp CHHHHHHHHHH--TSCHHHHHHHHHHHTSCHHHHHHHHHTCCS
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 56789999999 899999999999999999999999998654
No 287
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=91.47 E-value=0.6 Score=39.08 Aligned_cols=39 Identities=8% Similarity=-0.042 Sum_probs=26.1
Q ss_pred cCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc---cEEEEEecC
Q 021955 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYD 179 (305)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~---nFIfwq~~~ 179 (305)
.+|..+|.+.+.||..|..+.. .+.++.++ +.+|..+++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~------~l~~l~~~~~~~v~~~~~~~ 65 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEP------MVEDWAKTAPQDVVLKQVPI 65 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHH------HHHHHHHTCCTTEEEEEEEC
T ss_pred CCCeEEEEEECCCCccHHHhhH------HHHHHHHHCCCCeEEEEEec
Confidence 3788899999999999998864 44444443 445544444
No 288
>2crn_A Ubash3A protein; compact three-helix bundle, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=91.27 E-value=0.29 Score=35.13 Aligned_cols=41 Identities=24% Similarity=0.286 Sum_probs=36.4
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCC-CHHHHHHHHHhcCC
Q 021955 8 KESRISSFLEIAVGASGVTAIECLQATSW-KLDEAILLFFAVNE 50 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A~~~Le~~~w-dLe~Av~~ff~~~~ 50 (305)
..+.|.+.+++ |-+.+.|++-|..+++ |+|.|++-.|++.+
T Consensus 9 ~e~~v~~L~~M--GF~~~~a~~AL~~t~n~~~e~A~~wL~~h~~ 50 (64)
T 2crn_A 9 SPSLLEPLLAM--GFPVHTALKALAATGRKTAEEALAWLHDHCN 50 (64)
T ss_dssp SCSSHHHHHHT--SCCHHHHHHHHHHHTSCCHHHHHHHHHHHSS
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHhCCCCHHHHHHHHHhCCC
Confidence 45578999998 9999999999999976 99999999999765
No 289
>4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B*
Probab=91.24 E-value=0.28 Score=39.53 Aligned_cols=40 Identities=23% Similarity=0.120 Sum_probs=35.7
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021955 9 ESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (305)
Q Consensus 9 ~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 50 (305)
.+.|.+|+++ |-+.+.|+.-|..+++|++.|++..|...+
T Consensus 77 ~~~v~~L~eM--GF~~~~a~~AL~~~~nd~erAlewL~~~~~ 116 (118)
T 4ae4_A 77 LQLMSKFKEM--GFELKDIKEVLLLHNNDQDNALEDLMARAG 116 (118)
T ss_dssp HHHHHHHHHT--TCCHHHHHHHHHHTTTCHHHHHHHHHHHC-
T ss_pred HHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHHhcc
Confidence 3569999999 999999999999999999999999987643
No 290
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.07 E-value=0.79 Score=36.47 Aligned_cols=76 Identities=9% Similarity=0.097 Sum_probs=46.8
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCC--hhH-HHHHHhcCCCCCceE
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT--SEG-WKVCSFYNMDSIPAV 199 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds--~eg-~~~~~~Y~~~~~P~i 199 (305)
....+.+..+...++ |+| +..+||..|+.+.+ +.+-++-.|.++.++.+. ++. ..+...|.+..+|+|
T Consensus 14 ~~~~~~~~~~i~~~~-vvv-f~~~~Cp~C~~~~~-------~L~~~~i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l 84 (130)
T 2cq9_A 14 TAPVNQIQETISDNC-VVI-FSKTSCSYCTMAKK-------LFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRI 84 (130)
T ss_dssp CCHHHHHHHHHHHSS-EEE-EECSSCSHHHHHHH-------HHHHHTCCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEE
T ss_pred HHHHHHHHHHHcCCc-EEE-EEcCCChHHHHHHH-------HHHHcCCCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEE
Confidence 445555666666665 444 67789999998743 222234467766555442 222 247788999999998
Q ss_pred EEEeCCCCeeEE
Q 021955 200 LVIDPITGQKIC 211 (305)
Q Consensus 200 ~IIdprTGe~~~ 211 (305)
. ++ |+.+.
T Consensus 85 ~-i~---G~~ig 92 (130)
T 2cq9_A 85 F-VN---GTFIG 92 (130)
T ss_dssp E-ET---TEEEE
T ss_pred E-EC---CEEEc
Confidence 4 43 66543
No 291
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=91.06 E-value=1.6 Score=36.22 Aligned_cols=41 Identities=17% Similarity=0.171 Sum_probs=29.3
Q ss_pred HHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
+++..+++...|++ ||+ |+.+ +.|..++++|.+.|...+++
T Consensus 141 ~~a~~~gv~gtPt~-vin---g~~~--~~g~~~~~~l~~~i~~~l~~ 181 (195)
T 2znm_A 141 KLTEQYRIDSTPTV-IVG---GKYR--VIFNNGFDGGVHTIKELVAK 181 (195)
T ss_dssp HHHHHTTCCSSSEE-EET---TTEE--ECCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCeE-EEC---CEEE--EcCCCCHHHHHHHHHHHHHH
Confidence 34557788999995 454 5543 46777888888888888764
No 292
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=90.21 E-value=0.066 Score=44.31 Aligned_cols=45 Identities=11% Similarity=0.181 Sum_probs=33.9
Q ss_pred HHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021955 184 GWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (305)
Q Consensus 184 g~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~~ 234 (305)
..++++.|++...|+++|- .|+. +.|+.+++.|.+.|...+.++-
T Consensus 98 ~~~la~~~gI~gtPt~vi~---nG~~---i~G~~~~~~l~~~i~~~~~~~~ 142 (147)
T 3gv1_A 98 TTSLGEQFGFNGTPTLVFP---NGRT---QSGYSPMPQLEEIIRKNQQEGH 142 (147)
T ss_dssp HHHHHHHTTCCSSCEEECT---TSCE---EESCCCTTHHHHHHHHTSCC--
T ss_pred HHHHHHHhCCCccCEEEEE---CCEE---eeCCCCHHHHHHHHHHHHHhcc
Confidence 4466778889999999982 4653 6799999999888888776553
No 293
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=89.66 E-value=2 Score=35.00 Aligned_cols=63 Identities=16% Similarity=0.222 Sum_probs=42.8
Q ss_pred hccEEEEEecCCChhHHHHHHhcCCC--CCceEEEEeC-CCCeeEEEec-CCCChHHHHHHHHHHHhh
Q 021955 169 SVNFIFWQEYDDTSEGWKVCSFYNMD--SIPAVLVIDP-ITGQKICSWC-GMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 169 ~~nFIfwq~~~ds~eg~~~~~~Y~~~--~~P~i~IIdp-rTGe~~~~~~-G~~~~~~~l~~L~~fl~~ 232 (305)
+..++|.-++.+..+..+.+.++++. .+|.|+|++. ..+.+. ... |.++++.+.+-+..|++.
T Consensus 62 kgki~Fv~vd~~~~~~~~~l~~fGl~~~~~P~v~i~~~~~~~~Ky-~~~~~~~t~~~i~~Fv~d~l~G 128 (147)
T 3bj5_A 62 KGKILFAFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKY-KPESEELTAERITEFCHRFLEG 128 (147)
T ss_dssp TTTCEEEEECTTCGGGHHHHHHTTCCGGGCSEEEEEECSSSCEEE-CCSCCCCCHHHHHHHHHHHHTT
T ss_pred CCceEEEEEecchHhHHHHHHHcCCCcccCCEEEEEecccccccC-CCCcccCCHHHHHHHHHHHHcC
Confidence 34577777776546666788999996 4999999995 344442 223 667887766666666653
No 294
>2lva_A Ubiquitin carboxyl-terminal hydrolase 28; UIM, ubiquitin interacting motif, UBA domain, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=89.11 E-value=0.066 Score=43.43 Aligned_cols=43 Identities=16% Similarity=0.117 Sum_probs=37.8
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021955 7 DKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (305)
Q Consensus 7 ~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 49 (305)
..+-+|.|..+||+..|...=.+.|++++|||+.||.++-+..
T Consensus 17 ~~Q~lLNQLrEITGIqD~~~L~~ALkAsnGdl~qAV~~LT~~~ 59 (129)
T 2lva_A 17 QGQMLLNQLREITGIQDPSFLHEALKASNGDITQAVSLLTDER 59 (129)
Confidence 3455899999998778899999999999999999999997754
No 295
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=88.68 E-value=2.9 Score=29.28 Aligned_cols=75 Identities=13% Similarity=0.046 Sum_probs=44.0
Q ss_pred EEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChH
Q 021955 141 VNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQ 220 (305)
Q Consensus 141 Vniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~ 220 (305)
+.+..++|..|+.+.+- .+-.+-.|...-++.+......+...|....+|++. ++ |+.+ .|+
T Consensus 4 ~~y~~~~C~~C~~~~~~-------l~~~~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~-~~---g~~i---~g~---- 65 (82)
T 1fov_A 4 EIYTKETCPYCHRAKAL-------LSSKGVSFQELPIDGNAAKREEMIKRSGRTTVPQIF-ID---AQHI---GGY---- 65 (82)
T ss_dssp EEEECSSCHHHHHHHHH-------HHHHTCCCEEEECTTCSHHHHHHHHHHSSCCSCEEE-ET---TEEE---ESH----
T ss_pred EEEECCCChhHHHHHHH-------HHHCCCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE-EC---CEEE---eCH----
Confidence 34567899999876321 111233466555544333345688889999999984 33 6643 232
Q ss_pred HHHHHHHHHHhhCCCC
Q 021955 221 PLGEMLLPFMDRSPRK 236 (305)
Q Consensus 221 ~~l~~L~~fl~~~~~~ 236 (305)
..|.++++.+.+.
T Consensus 66 ---~~i~~~~~~g~l~ 78 (82)
T 1fov_A 66 ---DDLYALDARGGLD 78 (82)
T ss_dssp ---HHHHHHHHTTCSH
T ss_pred ---HHHHHHHHCCCHH
Confidence 2355666666553
No 296
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=88.58 E-value=1.7 Score=33.11 Aligned_cols=75 Identities=13% Similarity=0.164 Sum_probs=45.0
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhH---HH-HHHhcCCCCCce
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG---WK-VCSFYNMDSIPA 198 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg---~~-~~~~Y~~~~~P~ 198 (305)
..+.+.++...+.++ +|.+..+||..|+.+.+ +.+-++-.|...-++.+.+++ .. +...+...++|.
T Consensus 6 ~~~~~~~~~~i~~~~--v~vy~~~~Cp~C~~~~~-------~L~~~~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~ 76 (113)
T 3rhb_A 6 SRMEESIRKTVTENT--VVIYSKTWCSYCTEVKT-------LFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPN 76 (113)
T ss_dssp CHHHHHHHHHHHHSS--EEEEECTTCHHHHHHHH-------HHHHTTCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCE
T ss_pred HHHHHHHHHHHhcCC--EEEEECCCChhHHHHHH-------HHHHcCCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCE
Confidence 345666666777777 34456689999987631 112223346666665542233 33 555678899999
Q ss_pred EEEEeCCCCeeE
Q 021955 199 VLVIDPITGQKI 210 (305)
Q Consensus 199 i~IIdprTGe~~ 210 (305)
|. |+ |+.+
T Consensus 77 if-i~---g~~i 84 (113)
T 3rhb_A 77 VF-VC---GKHI 84 (113)
T ss_dssp EE-ET---TEEE
T ss_pred EE-EC---CEEE
Confidence 94 44 6644
No 297
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=87.27 E-value=1.1 Score=35.11 Aligned_cols=77 Identities=13% Similarity=0.152 Sum_probs=46.5
Q ss_pred ccccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc------cEEEEEecCCCh--h-HHHHHH
Q 021955 119 VMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV------NFIFWQEYDDTS--E-GWKVCS 189 (305)
Q Consensus 119 l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~------nFIfwq~~~ds~--e-g~~~~~ 189 (305)
.|......+.+....+..+ | +.+..+||..|+.+ ++.++++ .|..+-++.+.. + -..+..
T Consensus 8 ~~~~~~~~~~~~~~i~~~~-V-vvf~~~~Cp~C~~a---------lk~~L~~~~~~~i~~~~vdid~~~~~~~~~~~l~~ 76 (118)
T 3c1r_A 8 HMVSQETIKHVKDLIAENE-I-FVASKTYCPYCHAA---------LNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYE 76 (118)
T ss_dssp CCSCHHHHHHHHHHHHHSS-E-EEEECSSCHHHHHH---------HHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHccCc-E-EEEEcCCCcCHHHH---------HHHHHHHcCCCCCCeEEEECccCCChHHHHHHHHH
Confidence 4555666666666666666 3 33667899999876 2334433 344444443321 1 235777
Q ss_pred hcCCCCCceEEEEeCCCCeeE
Q 021955 190 FYNMDSIPAVLVIDPITGQKI 210 (305)
Q Consensus 190 ~Y~~~~~P~i~IIdprTGe~~ 210 (305)
.|...++|.| +|+ |+.+
T Consensus 77 ~~g~~tvP~v-fi~---g~~i 93 (118)
T 3c1r_A 77 INGQRTVPNI-YIN---GKHI 93 (118)
T ss_dssp HHSCCSSCEE-EET---TEEE
T ss_pred HhCCCCcCEE-EEC---CEEE
Confidence 8999999988 444 6653
No 298
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=87.22 E-value=1.8 Score=35.44 Aligned_cols=73 Identities=10% Similarity=0.110 Sum_probs=44.4
Q ss_pred HHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCC--hhH-HHHHHhcCCCCCceEEE
Q 021955 125 FEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT--SEG-WKVCSFYNMDSIPAVLV 201 (305)
Q Consensus 125 f~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds--~eg-~~~~~~Y~~~~~P~i~I 201 (305)
..+.+..+...++ |+| +..+||..|+.+.+ +.+-++-.|..+.++.+. ++. ..+...|.+.++|+|.
T Consensus 38 ~~~~~~~~i~~~~-Vvv-f~~~~Cp~C~~~k~-------~L~~~~i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if- 107 (146)
T 2ht9_A 38 PVNQIQETISDNC-VVI-FSKTSCSYCTMAKK-------LFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF- 107 (146)
T ss_dssp CHHHHHHHHHHCS-EEE-EECTTCHHHHHHHH-------HHHHHTCCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE-
T ss_pred HHHHHHHHhcCCC-EEE-EECCCChhHHHHHH-------HHHHcCCCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE-
Confidence 3444455555555 444 67889999998743 222234467666665542 222 2477889999999984
Q ss_pred EeCCCCeeE
Q 021955 202 IDPITGQKI 210 (305)
Q Consensus 202 IdprTGe~~ 210 (305)
++ |+.+
T Consensus 108 i~---G~~i 113 (146)
T 2ht9_A 108 VN---GTFI 113 (146)
T ss_dssp ET---TEEE
T ss_pred EC---CEEE
Confidence 44 6643
No 299
>4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B*
Probab=86.88 E-value=1.1 Score=36.03 Aligned_cols=45 Identities=13% Similarity=0.235 Sum_probs=41.6
Q ss_pred CCchhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021955 3 SESIDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (305)
Q Consensus 3 ~~s~~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 49 (305)
.++..+++.|.+++++ |-+...|++-|..++.|.|.|++-.|.+.
T Consensus 3 ~l~~~e~~~v~~l~~M--GFp~~~~~kAl~~~g~~~e~amewL~~h~ 47 (118)
T 4ae4_A 3 HMSPSERQCVETVVNM--GYSYECVLRAMKAAGANIEQILDYLFAHG 47 (118)
T ss_dssp CSCHHHHHHHHHHHHT--TCCHHHHHHHHHHHCSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHc--CCCHHHHHHHHHHHCcCHHHHHHHHHHhc
Confidence 4678899999999999 99999999999999999999999999864
No 300
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.65 E-value=1 Score=32.71 Aligned_cols=43 Identities=16% Similarity=0.108 Sum_probs=38.1
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021955 7 DKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (305)
Q Consensus 7 ~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 49 (305)
+..+.+.++.++=-..|.++-+..|++++||++.||+..+...
T Consensus 17 ~~~~~v~~L~~MFP~lD~~vI~~vL~a~~G~vd~aId~LL~ms 59 (67)
T 2dhy_A 17 EFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQMN 59 (67)
T ss_dssp CSHHHHHHHHHHCSSSCHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Confidence 4667888888887888999999999999999999999998854
No 301
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=86.40 E-value=1.7 Score=32.40 Aligned_cols=60 Identities=12% Similarity=0.052 Sum_probs=37.5
Q ss_pred EEEeecCCCccchhhhhccCCCHHHHHHhhcc---EEEEEecCCC--hhH-HHHHHhcCCCCCceEEEEeCCCCeeE
Q 021955 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN---FIFWQEYDDT--SEG-WKVCSFYNMDSIPAVLVIDPITGQKI 210 (305)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~n~~V~~~i~~n---FIfwq~~~ds--~eg-~~~~~~Y~~~~~P~i~IIdprTGe~~ 210 (305)
++.+..+||..|+.+.+ .+ +-+... |.+.-++.+. ++. ..+...|.+.++|+|. ++ |+.+
T Consensus 14 v~~f~~~~C~~C~~~~~------~L-~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i~-~~---g~~i 79 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQE------LL-SQLPFKEGLLEFVDITATSDTNEIQDYLQQLTGARTVPRVF-IG---KECI 79 (105)
T ss_dssp EEEEECSSCHHHHHHHH------HH-HHSCBCTTSEEEEEGGGSTTHHHHHHHHHHHHSCCCSCEEE-ET---TEEE
T ss_pred EEEEEcCCCHhHHHHHH------HH-HHcCCCCCccEEEEccCCCCHHHHHHHHHHHhCCCCcCeEE-EC---CEEE
Confidence 34467789999998742 11 222333 7777665543 233 3577789999999984 43 6654
No 302
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=86.40 E-value=3.8 Score=29.62 Aligned_cols=69 Identities=19% Similarity=0.071 Sum_probs=43.3
Q ss_pred eecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChh-H----HHHHHhcCCCCCceEEEEeCCCCeeEEEecCCC
Q 021955 143 LQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE-G----WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMI 217 (305)
Q Consensus 143 iq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~e-g----~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~ 217 (305)
+..++|..|+++.+ +.+-++-.|.+..++....+ . ..+.+.|....+|.|.+ + |+. +.|+
T Consensus 17 y~~~~Cp~C~~~~~-------~L~~~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~-~---g~~---i~G~- 81 (92)
T 3ic4_A 17 YGLSTCPHCKRTLE-------FLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK-G---DKH---VLGY- 81 (92)
T ss_dssp EECTTCHHHHHHHH-------HHHHHTCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE-T---TEE---EESC-
T ss_pred EECCCChHHHHHHH-------HHHHcCCCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE-C---CEE---EeCC-
Confidence 45679999988631 22223445766666543332 2 56778888899999986 3 543 4565
Q ss_pred ChHHHHHHH
Q 021955 218 NPQPLGEML 226 (305)
Q Consensus 218 ~~~~~l~~L 226 (305)
+++++.+.|
T Consensus 82 ~~~~l~~~l 90 (92)
T 3ic4_A 82 NEEKLKELI 90 (92)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHh
Confidence 777766554
No 303
>2juj_A E3 ubiquitin-protein ligase CBL; alpha helix, UBA domain, calcium, cytoplasm, metal- binding, phosphorylation, proto-oncogene, SH2 domain; NMR {Homo sapiens}
Probab=86.22 E-value=1.4 Score=30.70 Aligned_cols=44 Identities=16% Similarity=0.076 Sum_probs=38.9
Q ss_pred chhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021955 5 SIDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (305)
Q Consensus 5 s~~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 50 (305)
+.--++.|.+.|++ |-|.+.|++-|..++.|++.|.+...+-..
T Consensus 4 ~~p~e~~Ia~L~sm--Gfsr~da~~AL~ia~Ndv~~AtNiLlEf~~ 47 (56)
T 2juj_A 4 SPQLSSEIENLMSQ--GYSYQDIQKALVIAQNNIEMAKNILREFVS 47 (56)
T ss_dssp CHHHHHHHHHHHTT--TCCHHHHHHHHHHTTTCSHHHHHHHHHSCC
T ss_pred CCCChHHHHHHHHc--CCCHHHHHHHHHHhcccHHHHHHHHHHHHc
Confidence 44567799999999 999999999999999999999999888643
No 304
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=85.95 E-value=5.2 Score=27.30 Aligned_cols=65 Identities=14% Similarity=0.215 Sum_probs=39.0
Q ss_pred EEEeecCCCccchhhhhccCCCHHHHHHhhc---cEEEEEecCCC-hhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecC
Q 021955 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDT-SEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCG 215 (305)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~n~~V~~~i~~---nFIfwq~~~ds-~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G 215 (305)
++.+..+||..|+.+. .++++ .|... +++. ++.....+.|.+..+|++.+ + |+. +.|
T Consensus 3 i~~y~~~~C~~C~~~~----------~~l~~~~i~~~~~--di~~~~~~~~~~~~~~~~~vP~l~~-~---g~~---~~g 63 (75)
T 1r7h_A 3 ITLYTKPACVQCTATK----------KALDRAGLAYNTV--DISLDDEARDYVMALGYVQAPVVEV-D---GEH---WSG 63 (75)
T ss_dssp EEEEECTTCHHHHHHH----------HHHHHTTCCCEEE--ETTTCHHHHHHHHHTTCBCCCEEEE-T---TEE---EES
T ss_pred EEEEeCCCChHHHHHH----------HHHHHcCCCcEEE--ECCCCHHHHHHHHHcCCCccCEEEE-C---CeE---EcC
Confidence 3456778999998763 33332 35544 4443 34444446789999999873 3 553 456
Q ss_pred CCChHHHHH
Q 021955 216 MINPQPLGE 224 (305)
Q Consensus 216 ~~~~~~~l~ 224 (305)
+ +++++.+
T Consensus 64 ~-~~~~l~~ 71 (75)
T 1r7h_A 64 F-RPERIKQ 71 (75)
T ss_dssp C-CHHHHHH
T ss_pred C-CHHHHHH
Confidence 4 5655443
No 305
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=85.64 E-value=3.1 Score=31.41 Aligned_cols=70 Identities=13% Similarity=0.118 Sum_probs=43.6
Q ss_pred ecCCCccchhhhhccCCCHHHHHHhhccEE-EEEecCC-ChhHHHHHHhc--CCCCCceEEEEeCCCCeeEEEecCCCCh
Q 021955 144 QSTKEFSSLMLNRDTWGNEAVSQIISVNFI-FWQEYDD-TSEGWKVCSFY--NMDSIPAVLVIDPITGQKICSWCGMINP 219 (305)
Q Consensus 144 q~~~~f~c~~lnRDvw~n~~V~~~i~~nFI-fwq~~~d-s~eg~~~~~~Y--~~~~~P~i~IIdprTGe~~~~~~G~~~~ 219 (305)
..+||..|.+. +++++++=| |-.++++ ++++.+..... ...+.|.|.|-| |..+ .| .++
T Consensus 10 s~~~Cp~C~~a----------K~~L~~~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i~D---g~~l---~~-~~~ 72 (92)
T 2lqo_A 10 TTSWCGYCLRL----------KTALTANRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKFAD---GSTL---TN-PSA 72 (92)
T ss_dssp ECTTCSSHHHH----------HHHHHHTTCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEETT---SCEE---ES-CCH
T ss_pred cCCCCHhHHHH----------HHHHHhcCCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEEeC---CEEE---eC-CCH
Confidence 35699999766 566776533 3334554 35555544433 467899998755 4433 23 477
Q ss_pred HHHHHHHHHHH
Q 021955 220 QPLGEMLLPFM 230 (305)
Q Consensus 220 ~~~l~~L~~fl 230 (305)
+++.+.|.+..
T Consensus 73 ~el~~~L~el~ 83 (92)
T 2lqo_A 73 DEVKAKLVKIA 83 (92)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 88887777664
No 306
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=85.46 E-value=3 Score=31.40 Aligned_cols=67 Identities=10% Similarity=0.186 Sum_probs=39.6
Q ss_pred HHHHHHcCCeEEEEeec----CCCccchhhhhccCCCHHHHHHhhc---cEEEEEecCCChhHHHHHHhcCCCCCceEEE
Q 021955 129 KDAALAQDKWLLVNLQS----TKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (305)
Q Consensus 129 ~~~Ak~~~KwLLVniq~----~~~f~c~~lnRDvw~n~~V~~~i~~---nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~I 201 (305)
+....+.++ |+||..+ +||..|+.+. .++++ .|...-++.+..-...+...+...++|.|.
T Consensus 10 ~~~~i~~~~-vvvf~~g~~~~~~C~~C~~~~----------~~L~~~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v~- 77 (105)
T 2yan_A 10 LKVLTNKAS-VMLFMKGNKQEAKCGFSKQIL----------EILNSTGVEYETFDILEDEEVRQGLKAYSNWPTYPQLY- 77 (105)
T ss_dssp HHHHHTSSS-EEEEESBCSSSBCTTHHHHHH----------HHHHHHTCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEE-
T ss_pred HHHHhccCC-EEEEEecCCCCCCCccHHHHH----------HHHHHCCCCeEEEECCCCHHHHHHHHHHHCCCCCCeEE-
Confidence 334444554 6676652 7999998763 33332 455554443322233467778889999984
Q ss_pred EeCCCCeeE
Q 021955 202 IDPITGQKI 210 (305)
Q Consensus 202 IdprTGe~~ 210 (305)
|+ |+.+
T Consensus 78 i~---g~~i 83 (105)
T 2yan_A 78 VK---GELV 83 (105)
T ss_dssp ET---TEEE
T ss_pred EC---CEEE
Confidence 44 6644
No 307
>2oo9_A E3 ubiquitin-protein ligase CBL; alpha-helical domain, homodimer; 2.10A {Homo sapiens}
Probab=83.26 E-value=2.5 Score=28.32 Aligned_cols=39 Identities=15% Similarity=0.098 Sum_probs=34.6
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Q 021955 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAV 48 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~ 48 (305)
-++.|...|+. |-|.+.|++-|..++.|+|.|.+...+.
T Consensus 4 ~e~~I~~L~s~--Gf~~~~~~rAL~ia~Nnie~A~nIL~ef 42 (46)
T 2oo9_A 4 LSSEIENLMSQ--GYSYQDIQKALVIAQNNIEMAKNILREF 42 (46)
T ss_dssp HHHHHHHHHHT--TBCHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHc--CCCHHHHHHHHHHhhccHHHHHHHHHHh
Confidence 35689999998 9999999999999999999999877653
No 308
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=83.16 E-value=2.4 Score=32.47 Aligned_cols=63 Identities=5% Similarity=-0.143 Sum_probs=37.1
Q ss_pred EEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCC--hhH-HHHHHhcCCCCCceEEEEeCCCCeeE
Q 021955 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT--SEG-WKVCSFYNMDSIPAVLVIDPITGQKI 210 (305)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds--~eg-~~~~~~Y~~~~~P~i~IIdprTGe~~ 210 (305)
+|.+..+||..|+.+.+- +..-.+. ..+|...-++.+. .+. ..+...|.+.++|+|. ++ |+.+
T Consensus 21 vv~f~~~~Cp~C~~~~~~-L~~~~~~---~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~-i~---g~~i 86 (114)
T 2hze_A 21 VTIFVKYTCPFCRNALDI-LNKFSFK---RGAYEIVDIKEFKPENELRDYFEQITGGKTVPRIF-FG---KTSI 86 (114)
T ss_dssp EEEEECTTCHHHHHHHHH-HTTSCBC---TTSEEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEE-ET---TEEE
T ss_pred EEEEEeCCChhHHHHHHH-HHHcCCC---cCceEEEEccCCCChHHHHHHHHHHhCCCCcCEEE-EC---CEEE
Confidence 445677899999887432 2211111 0116666555443 122 3677889999999875 44 6654
No 309
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=83.16 E-value=8.6 Score=31.51 Aligned_cols=40 Identities=10% Similarity=0.114 Sum_probs=28.8
Q ss_pred HHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
++++.+++...|+++ |+ |+.+ ..|. ++++|.+.|...+.+
T Consensus 146 ~~a~~~gv~gtPt~v-in---g~~~--~~g~-~~~~l~~~i~~~~~~ 185 (193)
T 2rem_A 146 AYALKVRPVGTPTIV-VN---GRYM--VTGH-DFEDTLRITDYLVSR 185 (193)
T ss_dssp HHHHHHCCSSSSEEE-ET---TTEE--ECCS-SHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCeEE-EC---CEEE--ecCC-CHHHHHHHHHHHHHH
Confidence 455677899999954 44 5543 3577 888998888887754
No 310
>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis}
Probab=81.86 E-value=1.5 Score=34.39 Aligned_cols=34 Identities=38% Similarity=0.407 Sum_probs=29.3
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHH
Q 021955 9 ESRISSFLEIAVGASGVTAIECLQATSWKLDEAIL 43 (305)
Q Consensus 9 ~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~ 43 (305)
.+.|.--|+= +|++.+.|++-|+.|+|||=.||-
T Consensus 66 ~edi~lv~~q-~~vs~~~A~~aL~~~~gDiv~Ai~ 99 (102)
T 1tr8_A 66 EDDIELVMNQ-TGASREDATRALQETGGDLAEAIM 99 (102)
T ss_dssp HHHHHHHHHH-HCCCHHHHHHHHHHTTTCHHHHHH
T ss_pred HHHHHHHHHH-hCCCHHHHHHHHHHcCCCHHHHHH
Confidence 3557777777 899999999999999999999975
No 311
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=80.22 E-value=4.5 Score=28.30 Aligned_cols=54 Identities=11% Similarity=0.106 Sum_probs=33.0
Q ss_pred EEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCC-hhHHHHHHhcCCCCCceEEEEe
Q 021955 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT-SEGWKVCSFYNMDSIPAVLVID 203 (305)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds-~eg~~~~~~Y~~~~~P~i~IId 203 (305)
++.+..+||..|+.+.+- +. -.+-.|.. ++++. ++.......|++..+|++ +++
T Consensus 3 v~~f~~~~C~~C~~~~~~------l~-~~~i~~~~--vdi~~~~~~~~~~~~~g~~~vP~~-~~~ 57 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRA------ME-NRGFDFEM--INVDRVPEAAEALRAQGFRQLPVV-IAG 57 (81)
T ss_dssp EEEEECTTCHHHHHHHHH------HH-HTTCCCEE--EETTTCHHHHHHHHHTTCCSSCEE-EET
T ss_pred EEEEcCCCChhHHHHHHH------HH-HCCCCeEE--EECCCCHHHHHHHHHhCCCccCEE-EEC
Confidence 455678899999887321 11 12223544 45553 455555556899999998 444
No 312
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=80.19 E-value=8.5 Score=33.09 Aligned_cols=76 Identities=7% Similarity=0.051 Sum_probs=45.4
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEE
Q 021955 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~I 201 (305)
..++..-+. +...+++.+.+.+..+..+.. ...++.....|....-.++ -..+++.|++..||++++
T Consensus 145 ~~~l~~~~~--~~~~~~~al~f~~~~~~~~~~---------~~~d~~~~~~i~v~~~~~~--~~~l~~~f~v~~~Pslvl 211 (244)
T 3q6o_A 145 LEEIDGFFA--RNNEEYLALIFEXGGSYLARE---------VALDLSQHKGVAVRRVLNT--EANVVRKFGVTDFPSCYL 211 (244)
T ss_dssp HHHHHTHHH--HCCCSEEEEEEECTTCCHHHH---------HHHHTTTCTTEEEEEEETT--CHHHHHHHTCCCSSEEEE
T ss_pred HHHHHHHhh--cCCCceEEEEEEECCcchHHH---------HHHHhccCCceEEEEEeCc--hHHHHHHcCCCCCCeEEE
Confidence 344444443 377788888888765333222 2334444333433332222 367899999999999999
Q ss_pred EeCCCCeeEE
Q 021955 202 IDPITGQKIC 211 (305)
Q Consensus 202 IdprTGe~~~ 211 (305)
+++ .|+...
T Consensus 212 ~~~-~g~~~~ 220 (244)
T 3q6o_A 212 LFR-NGSVSR 220 (244)
T ss_dssp EET-TSCEEE
T ss_pred EeC-CCCeEe
Confidence 996 566443
No 313
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=79.60 E-value=5.8 Score=30.12 Aligned_cols=62 Identities=13% Similarity=0.226 Sum_probs=36.9
Q ss_pred HcCCeEEEEeec----CCCccchhhhhccCCCHHHHHHhhc---cEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCC
Q 021955 134 AQDKWLLVNLQS----TKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPIT 206 (305)
Q Consensus 134 ~~~KwLLVniq~----~~~f~c~~lnRDvw~n~~V~~~i~~---nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprT 206 (305)
+.+| |+||..+ ++|..|+... .++++ .|...-++.+..-...+...+...++|.|. |+
T Consensus 13 ~~~~-vvvy~~g~~~~~~Cp~C~~ak----------~~L~~~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~if-i~--- 77 (109)
T 1wik_A 13 NKAS-VMLFMKGNKQEAKCGFSKQIL----------EILNSTGVEYETFDILEDEEVRQGLKTFSNWPTYPQLY-VR--- 77 (109)
T ss_dssp TTSS-EEEEESSTTTCCCSSTHHHHH----------HHHHHTCSCEEEEESSSCHHHHHHHHHHHSCCSSCEEE-CS---
T ss_pred ccCC-EEEEEecCCCCCCCchHHHHH----------HHHHHcCCCeEEEECCCCHHHHHHHHHHhCCCCCCEEE-EC---
Confidence 4455 6777765 7999998763 44443 355444433322233566677888999864 44
Q ss_pred CeeE
Q 021955 207 GQKI 210 (305)
Q Consensus 207 Ge~~ 210 (305)
|+.+
T Consensus 78 g~~i 81 (109)
T 1wik_A 78 GDLV 81 (109)
T ss_dssp SSEE
T ss_pred CEEE
Confidence 5543
No 314
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=78.89 E-value=4.6 Score=29.05 Aligned_cols=52 Identities=8% Similarity=-0.014 Sum_probs=32.3
Q ss_pred EEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhc-CCCCCceEE
Q 021955 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFY-NMDSIPAVL 200 (305)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y-~~~~~P~i~ 200 (305)
++.++.+||..|+.+.+ +.+-.+-.|.. ++++......+.+.| ...++|+|.
T Consensus 8 v~~y~~~~C~~C~~~~~-------~L~~~~i~~~~--vdv~~~~~~~l~~~~~~~~~vP~l~ 60 (89)
T 2klx_A 8 IILYTRPNCPYCKRARD-------LLDKKGVKYTD--IDASTSLRQEMVQRANGRNTFPQIF 60 (89)
T ss_dssp EEEESCSCCTTTHHHHH-------HHHHHTCCEEE--ECSCHHHHHHHHHHHHSSCCSCEEE
T ss_pred EEEEECCCChhHHHHHH-------HHHHcCCCcEE--EECCHHHHHHHHHHhCCCCCcCEEE
Confidence 44567789999997632 11112224544 455522345678888 899999985
No 315
>1aip_C EF-TS, elongation factor TS; nucleotide exchange, GTP-binding, complex of two elongation factors; 3.00A {Thermus thermophilus} SCOP: a.5.2.2 d.43.1.1
Probab=78.65 E-value=2 Score=37.43 Aligned_cols=41 Identities=20% Similarity=0.310 Sum_probs=36.8
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021955 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 49 (305)
...+|....+. ||+..-.|+.-|+.++||+|.|+...-..+
T Consensus 3 ~a~~VKeLRe~-TGagmmdCKkAL~e~~GD~ekAie~LR~kG 43 (196)
T 1aip_C 3 QMELIKKLREA-TGAGMMDVKRALEDAGWDEEKAVQLLRERG 43 (196)
T ss_dssp HHHHHHHHHHH-HCCCHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHH-hCCCHHHHHHHHHHcCCCHHHHHHHHHHcC
Confidence 46789999999 999999999999999999999999876643
No 316
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=78.60 E-value=11 Score=34.33 Aligned_cols=109 Identities=7% Similarity=0.041 Sum_probs=59.8
Q ss_pred CCccccccccHHHHHHHHHHc-CCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCChhHHHHH---
Q 021955 115 PPFHVMFNGSFEKAKDAALAQ-DKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVC--- 188 (305)
Q Consensus 115 PP~~l~~~gsf~~A~~~Ak~~-~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~eg~~~~--- 188 (305)
|.+.-+-..++.+.. ... .+..+|.+...++..|..+-. .|. .|.+-.+. .+.|.-++.+.- ..++
T Consensus 226 p~v~elt~~~~~~~~---~~~~~~~~~l~f~~~~~~~~~~~~~-~~~--~vA~~~~~~~~~~f~~id~~~~--~~~~~~~ 297 (350)
T 1sji_A 226 PTLRRLRPEDMFETW---EDDLNGIHIVAFAERSDPDGYEFLE-ILK--QVARDNTDNPDLSIVWIDPDDF--PLLVAYW 297 (350)
T ss_dssp CSEEECCTTTHHHHH---HSCSSSEEEEEECCTTSHHHHHHHH-HHH--HHHHHGGGCSSCCEEEECGGGC--HHHHHHH
T ss_pred cchhhcChhhHHHHh---cCCCCCcEEEEEEcCCCccHHHHHH-HHH--HHHHHhCCCCceEEEEECchhh--HHHHHHH
Confidence 444445555665532 221 143333366666666665532 221 23333333 555555554422 2355
Q ss_pred -HhcCCC-CCceEEEEeCCCCeeEEE-ec---CCCChHHHHHHHHHHHh
Q 021955 189 -SFYNMD-SIPAVLVIDPITGQKICS-WC---GMINPQPLGEMLLPFMD 231 (305)
Q Consensus 189 -~~Y~~~-~~P~i~IIdprTGe~~~~-~~---G~~~~~~~l~~L~~fl~ 231 (305)
+.+++. .+|.|+|+++.+|.+.+. +. |..+++.+.+-|.+|++
T Consensus 298 ~~~~gi~~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~~~ 346 (350)
T 1sji_A 298 EKTFKIDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLS 346 (350)
T ss_dssp HHHCCSCTTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHHHT
T ss_pred HhhcCCCccCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHHhc
Confidence 678886 699999999877754432 32 46788777666666664
No 317
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=78.55 E-value=3.9 Score=29.54 Aligned_cols=51 Identities=4% Similarity=-0.029 Sum_probs=31.9
Q ss_pred EEEeecCCCccchhhhhccCCCHHHHHHhhc---cEEEEEecCCChhHHHHHHhcCCCCCceEE
Q 021955 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (305)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~n~~V~~~i~~---nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~ 200 (305)
++.++.++|..|+.+ +.++++ .|...-++.+......+.+.|....+|.+.
T Consensus 8 v~ly~~~~C~~C~~~----------~~~L~~~~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l~ 61 (92)
T 2khp_A 8 VIIYTRPGCPYCARA----------KALLARKGAEFNEIDASATPELRAEMQERSGRNTFPQIF 61 (92)
T ss_dssp EEEEECTTCHHHHHH----------HHHHHHTTCCCEEEESTTSHHHHHHHHHHHTSSCCCEEE
T ss_pred EEEEECCCChhHHHH----------HHHHHHcCCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE
Confidence 444567899999876 344443 355554433222344677788999999753
No 318
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=77.63 E-value=4.1 Score=28.86 Aligned_cols=71 Identities=11% Similarity=0.018 Sum_probs=41.0
Q ss_pred EEEeecCCCccchhhhhccCCCHHHHHHhhc---cEEEEEecCCCh--hHHHHHHhcCC-----CCCceEEEEeCCCCee
Q 021955 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTS--EGWKVCSFYNM-----DSIPAVLVIDPITGQK 209 (305)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~n~~V~~~i~~---nFIfwq~~~ds~--eg~~~~~~Y~~-----~~~P~i~IIdprTGe~ 209 (305)
++-++.++|..|+.+. .++++ .|-+..++.+.. ....+...+.. .++|.|.| + |+.
T Consensus 6 v~ly~~~~Cp~C~~~~----------~~L~~~~i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i-~---g~~ 71 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAK----------QWFEENNIAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI-D---DEH 71 (89)
T ss_dssp EEEEECTTCHHHHHHH----------HHHHHTTCCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE-T---TEE
T ss_pred EEEEEcCCChhHHHHH----------HHHHHcCCCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE-C---CEE
Confidence 4455678999998763 34443 355554443322 22457777777 89999964 3 654
Q ss_pred EEEecCCCChHHHHHHHHHHH
Q 021955 210 ICSWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 210 ~~~~~G~~~~~~~l~~L~~fl 230 (305)
+ .| .+++.+.+.+.+
T Consensus 72 i---~g---~~~i~~~~~~~~ 86 (89)
T 3msz_A 72 I---GG---FTELKANADKIL 86 (89)
T ss_dssp E---ES---HHHHHHTHHHHT
T ss_pred E---eC---hHHHHHHHHHHh
Confidence 3 24 444444444443
No 319
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=76.94 E-value=16 Score=29.40 Aligned_cols=34 Identities=6% Similarity=0.193 Sum_probs=24.2
Q ss_pred HHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHH
Q 021955 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEML 226 (305)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L 226 (305)
++++.+++...|+++| + |+. +.|..+++.|.+.|
T Consensus 140 ~~a~~~gv~gtPt~vv-n---g~~---~~G~~~~~~l~~~i 173 (175)
T 1z6m_A 140 AEANAAHIQFVPTIII-G---EYI---FDESVTEEELRGYI 173 (175)
T ss_dssp HHHHHHTCCSSCEEEE-T---TEE---ECTTCCHHHHHHHH
T ss_pred HHHHHcCCCCcCeEEE-C---CEE---ccCCCCHHHHHHHh
Confidence 4566788899999654 4 663 46888888776655
No 320
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=76.76 E-value=7.9 Score=35.94 Aligned_cols=102 Identities=9% Similarity=0.085 Sum_probs=53.3
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcc-chhhhhccCCCHHHHHHh---hccEEEEEecCCChhHHHHHHhcCCC--
Q 021955 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFS-SLMLNRDTWGNEAVSQII---SVNFIFWQEYDDTSEGWKVCSFYNMD-- 194 (305)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~-c~~lnRDvw~n~~V~~~i---~~nFIfwq~~~ds~eg~~~~~~Y~~~-- 194 (305)
-.-+.+.+.... ..++.++|.+...++.. |+.+- ..|.+.. +..+.|.-++.+. -..++..+++.
T Consensus 222 ~elt~~~~~~~~-~~~~~~~v~f~~~~~~~~~~~~~------~~~~~~~~~~~~~i~f~~id~~~--~~~~~~~~gl~~~ 292 (382)
T 2r2j_A 222 REITFENGEELT-EEGLPFLILFHMKEDTESLEIFQ------NEVARQLISEKGTINFLHADCDK--FRHPLLHIQKTPA 292 (382)
T ss_dssp EECCHHHHHHHH-TTCCCEEEEEECTTCCHHHHHHH------HHHHHHTGGGTTTSEEEEEETTT--THHHHHHTTCCGG
T ss_pred EecChhhHHHHh-cCCCcEEEEEecCCchHHHHHHH------HHHHHHHHHhCCeeEEEEEchHH--hHHHHHHcCCCcc
Confidence 344455554443 34566666666655432 22221 2222222 3456666666553 33567888885
Q ss_pred CCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 195 SIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 195 ~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
.+|.|+|++.+.+..+....|..+++.+.+-|..|++
T Consensus 293 ~~P~i~i~~~~~~y~~~~~~~~~~~~~i~~F~~d~~~ 329 (382)
T 2r2j_A 293 DCPVIAIDSFRHMYVFGDFKDVLIPGKLKQFVFDLHS 329 (382)
T ss_dssp GCSEEEEECSSCEEECCCSGGGGSTTHHHHHHHHHHH
T ss_pred CCCEEEEEcchhcCCCCccccccCHHHHHHHHHHHHC
Confidence 6999999886432112112343455665555555555
No 321
>1xb2_B EF-TS, elongation factor TS, mitochondrial, EF-TSMT; protein-protein complex, translation; HET: MSE; 2.20A {Bos taurus} SCOP: a.5.2.2 d.43.1.1 d.43.1.1
Probab=74.06 E-value=2.7 Score=38.79 Aligned_cols=39 Identities=13% Similarity=0.099 Sum_probs=35.7
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021955 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFA 47 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~ 47 (305)
...+|.+..+. ||+..-.|++-|+.+|||+|.|+..--.
T Consensus 4 ta~~VKeLRe~-TGagmmdCKKAL~e~~GD~ekAie~LR~ 42 (291)
T 1xb2_B 4 SKELLMKLRRK-TGYSFINCKKALETCGGDLKQAESWLHK 42 (291)
T ss_dssp HHHHHHHHHHH-HCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHH-hCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 35688999999 9999999999999999999999998876
No 322
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=73.76 E-value=8.3 Score=31.07 Aligned_cols=70 Identities=13% Similarity=0.201 Sum_probs=42.2
Q ss_pred cHHHHHHHHHHcCCeEEEEeec----CCCccchhhhhccCCCHHHHHHhhcc---EEEEEecCCChhH-HHHHHhcCCCC
Q 021955 124 SFEKAKDAALAQDKWLLVNLQS----TKEFSSLMLNRDTWGNEAVSQIISVN---FIFWQEYDDTSEG-WKVCSFYNMDS 195 (305)
Q Consensus 124 sf~~A~~~Ak~~~KwLLVniq~----~~~f~c~~lnRDvw~n~~V~~~i~~n---FIfwq~~~ds~eg-~~~~~~Y~~~~ 195 (305)
+..+.+....+.++ |.||..+ ++|..|... ++++++. |...-++.+ ++. ..+...+...+
T Consensus 23 ~~~~~v~~~i~~~~-Vvvy~ks~~~~~~Cp~C~~a----------k~~L~~~gv~y~~vdI~~d-~~~~~~L~~~~G~~t 90 (135)
T 2wci_A 23 TTIEKIQRQIAENP-ILLYMKGSPKLPSCGFSAQA----------VQALAACGERFAYVDILQN-PDIRAELPKYANWPT 90 (135)
T ss_dssp HHHHHHHHHHHHCS-EEEEESBCSSSBSSHHHHHH----------HHHHHTTCSCCEEEEGGGC-HHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHhccCC-EEEEEEecCCCCCCccHHHH----------HHHHHHcCCceEEEECCCC-HHHHHHHHHHHCCCC
Confidence 34555555555565 6677775 689888765 4455543 555544433 333 34555667789
Q ss_pred CceEEEEeCCCCee
Q 021955 196 IPAVLVIDPITGQK 209 (305)
Q Consensus 196 ~P~i~IIdprTGe~ 209 (305)
+|.|. |+ |+.
T Consensus 91 vP~Vf-I~---G~~ 100 (135)
T 2wci_A 91 FPQLW-VD---GEL 100 (135)
T ss_dssp SCEEE-ET---TEE
T ss_pred cCEEE-EC---CEE
Confidence 99875 44 554
No 323
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=73.71 E-value=11 Score=31.52 Aligned_cols=48 Identities=13% Similarity=0.250 Sum_probs=39.1
Q ss_pred HHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021955 185 WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (305)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~~ 234 (305)
.+.+..+++...|+++|.. .|+.+..+.|..+++.|.+.|...+.++.
T Consensus 166 ~~~a~~~gv~g~Pt~~i~~--~G~~~~~~~G~~~~~~l~~~l~~~~~~~~ 213 (216)
T 2in3_A 166 FQRVAQWGISGFPALVVES--GTDRYLITTGYRPIEALRQLLDTWLQQHG 213 (216)
T ss_dssp HHHHHHTTCCSSSEEEEEE--TTEEEEEESSCCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHcCCcccceEEEEE--CCEEEEeccCCCCHHHHHHHHHHHHHhcc
Confidence 4567788999999998875 48876677899999999999998887643
No 324
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=71.77 E-value=13 Score=31.30 Aligned_cols=45 Identities=7% Similarity=0.085 Sum_probs=37.0
Q ss_pred HHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
+.+..+++...|+++|-+ .|+.+....|+.+++.|++.|...+++
T Consensus 160 ~~a~~~gv~g~Pt~~v~~--~~~~~~~~~g~~~~e~~~~~i~~~~~~ 204 (208)
T 3kzq_A 160 SLAKSLGVNSYPSLVLQI--NDAYFPIEVDYLSTEPTLKLIRERIIE 204 (208)
T ss_dssp HHHHHTTCCSSSEEEEEE--TTEEEEECCCSSCSHHHHHHHHHHHHH
T ss_pred HHHHHcCCCcccEEEEEE--CCEEEEeeCCCCCHHHHHHHHHHHHhc
Confidence 455678899999998766 477777778999999999999988865
No 325
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=71.68 E-value=12 Score=34.74 Aligned_cols=94 Identities=12% Similarity=0.066 Sum_probs=54.6
Q ss_pred CCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCC-hhHHHH-HHhcCCC-CCceEEEEeCCCCee-
Q 021955 136 DKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDT-SEGWKV-CSFYNMD-SIPAVLVIDPITGQK- 209 (305)
Q Consensus 136 ~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds-~eg~~~-~~~Y~~~-~~P~i~IIdprTGe~- 209 (305)
.+.++|.+.+.++..|..+-+.+ ..|.+-.+. .+.|.-++.+. +....+ .+.+++. .+|.|+|+++.++..
T Consensus 247 ~~~~~~~f~~~~~~~~~~~~~~l---~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl~~~~P~~~i~~~~~~~~~ 323 (367)
T 3us3_A 247 DGIHIVAFAEEADPDGYEFLEIL---KSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVTDADSV 323 (367)
T ss_dssp TTEEEEEECCTTSHHHHHHHHHH---HHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTCCTTSCEEEEEETTTCCEE
T ss_pred CCcEEEEEEcCCChhHHHHHHHH---HHHHHHcCCCCceEEEEECCccchhHHHHHHHhcCCCCCCCeEEEEecccccce
Confidence 34455556666666566553321 233333344 46666565543 223233 4567775 799999999876632
Q ss_pred EEEecC---CCChHHHHHHHHHHHhh
Q 021955 210 ICSWCG---MINPQPLGEMLLPFMDR 232 (305)
Q Consensus 210 ~~~~~G---~~~~~~~l~~L~~fl~~ 232 (305)
...+.+ .++++.+.+-|..|++.
T Consensus 324 ~y~~~~~~~~~t~~~i~~F~~~~~~G 349 (367)
T 3us3_A 324 WMEMDDEEDLPSAEELEDWLEDVLEG 349 (367)
T ss_dssp ECCCCTTSCCCCHHHHHHHHHHHHHT
T ss_pred eecCCcccccCCHHHHHHHHHHHHcC
Confidence 222343 57888877777777764
No 326
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=71.55 E-value=7.2 Score=33.04 Aligned_cols=45 Identities=11% Similarity=0.096 Sum_probs=29.0
Q ss_pred CCeEEE-EeecCCCccchh--hhhccCCCHHHHHHhhccE-EEEEecCCChh
Q 021955 136 DKWLLV-NLQSTKEFSSLM--LNRDTWGNEAVSQIISVNF-IFWQEYDDTSE 183 (305)
Q Consensus 136 ~KwLLV-niq~~~~f~c~~--lnRDvw~n~~V~~~i~~nF-Ifwq~~~ds~e 183 (305)
+||+++ ++-..||+.|.. ++. + ++...+|-..++ .++.++.|++.
T Consensus 47 Gk~vVL~fyP~~~tp~Ct~~El~~-f--~~~~~ef~~~g~d~VigIS~D~~~ 95 (176)
T 4f82_A 47 GKRVVIFGLPGAFTPTCSAQHVPG-Y--VEHAEQLRAAGIDEIWCVSVNDAF 95 (176)
T ss_dssp TCEEEEEEESCTTCHHHHHTHHHH-H--HHHHHHHHHTTCCEEEEEESSCHH
T ss_pred CCeEEEEEEcCCCCCCCCHHHHHH-H--HHHHHHHHhCCCCEEEEEeCCCHH
Confidence 677655 555789999965 321 1 344555656677 78888888754
No 327
>1oqy_A HHR23A, UV excision repair protein RAD23 homolog A; DNA repair, proteasome-mediated degradation, protein- protein interaction, replication; NMR {Homo sapiens} SCOP: a.5.2.1 a.5.2.1 a.189.1.1 d.15.1.1 PDB: 1qze_A 1tp4_A
Probab=71.05 E-value=2 Score=40.85 Aligned_cols=42 Identities=12% Similarity=0.193 Sum_probs=38.0
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021955 7 DKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (305)
Q Consensus 7 ~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 50 (305)
...+.|.+.+++ |-+.+.|++-|.+++||++.|++-.|++-.
T Consensus 167 ~~~~~i~~l~~M--Gf~~~~~~~AL~a~~nn~~~A~e~L~~gip 208 (368)
T 1oqy_A 167 EYETMLTEIMSM--GYERERVVAALRASYNNPHRAVEYLLTGIP 208 (368)
T ss_dssp THHHHHHHHHTT--TCCSHHHHHHHHHSCSSTTHHHHTTTTSST
T ss_pred chHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 467889999999 899999999999999999999999987643
No 328
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=70.28 E-value=8 Score=30.58 Aligned_cols=71 Identities=14% Similarity=0.119 Sum_probs=41.8
Q ss_pred HHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc------cEEEEEecCCCh--hH-HHHHHhcCCCC
Q 021955 125 FEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV------NFIFWQEYDDTS--EG-WKVCSFYNMDS 195 (305)
Q Consensus 125 f~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~------nFIfwq~~~ds~--eg-~~~~~~Y~~~~ 195 (305)
..+.+......++ |.|| ..+||..|+.. ++.++++ .|.++-++.+.. +. ..+...|...+
T Consensus 26 ~~~~v~~~i~~~~-Vvvy-~~~~Cp~C~~a---------~k~~L~~~~~~~i~~~~vdvd~~~~~~~~~~~L~~~~g~~t 94 (129)
T 3ctg_A 26 TVAHVKDLIGQKE-VFVA-AKTYCPYCKAT---------LSTLFQELNVPKSKALVLELDEMSNGSEIQDALEEISGQKT 94 (129)
T ss_dssp HHHHHHHHHHHSS-EEEE-ECTTCHHHHHH---------HHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHcCCC-EEEE-ECCCCCchHHH---------HHHHHHhcCccCCCcEEEEccccCCHHHHHHHHHHHhCCCC
Confidence 4444445555566 4444 56799999866 2444443 355555554431 22 35777888899
Q ss_pred CceEEEEeCCCCeeE
Q 021955 196 IPAVLVIDPITGQKI 210 (305)
Q Consensus 196 ~P~i~IIdprTGe~~ 210 (305)
+|.|. |+ |+.+
T Consensus 95 VP~vf-i~---g~~i 105 (129)
T 3ctg_A 95 VPNVY-IN---GKHI 105 (129)
T ss_dssp SCEEE-ET---TEEE
T ss_pred CCEEE-EC---CEEE
Confidence 99974 44 5543
No 329
>2qho_B E3 ubiquitin-protein ligase EDD1; protein-protein complex, protein binding/ligase complex; 1.85A {Homo sapiens}
Probab=69.43 E-value=11 Score=25.61 Aligned_cols=44 Identities=23% Similarity=0.181 Sum_probs=37.9
Q ss_pred hhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021955 6 IDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (305)
Q Consensus 6 ~~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 49 (305)
.-.+++|.+-..+--|.+.++-++=|+++|-|++.||+-.+...
T Consensus 7 ~vPe~li~q~q~VLqgksR~vIirELqrTnLdVN~AvNNlLsRD 50 (53)
T 2qho_B 7 VIPEELISQAQVVLQGKSRSVIIRELQRTNLDVNLAVNNLLSRD 50 (53)
T ss_dssp GSCHHHHHHHHHHSTTCCHHHHHHHHHHTTTCHHHHHHHHHC--
T ss_pred cCcHHHHHHHHHHhcCCcHHHHHHHHHHhCccHHHHHHHHhccc
Confidence 34578899998888999999999999999999999999887654
No 330
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=67.95 E-value=24 Score=26.12 Aligned_cols=72 Identities=11% Similarity=0.055 Sum_probs=40.8
Q ss_pred EEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCCh-hHHHH----HHhcCCCCCceEEEEeCCCCeeEEEecC
Q 021955 141 VNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTS-EGWKV----CSFYNMDSIPAVLVIDPITGQKICSWCG 215 (305)
Q Consensus 141 Vniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~-eg~~~----~~~Y~~~~~P~i~IIdprTGe~~~~~~G 215 (305)
+-++.+||..|+++.+ +.+-.+-.|-...++.+.. +...+ ...+...++|.|.| + .|+. + |
T Consensus 25 ~ly~~~~Cp~C~~ak~-------~L~~~~i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i-~--~~~~---i-g 90 (103)
T 3nzn_A 25 IMYGLSTCVWCKKTKK-------LLTDLGVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII-N--DEKA---I-V 90 (103)
T ss_dssp EEEECSSCHHHHHHHH-------HHHHHTBCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE-T--TTEE---E-E
T ss_pred EEEcCCCCchHHHHHH-------HHHHcCCCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE-C--CCEE---E-E
Confidence 3356779999988731 2222344576666665433 33333 34567899999876 2 1332 3 3
Q ss_pred CCChHHHHHHH
Q 021955 216 MINPQPLGEML 226 (305)
Q Consensus 216 ~~~~~~~l~~L 226 (305)
..+++++.+.|
T Consensus 91 g~~~~~l~~~L 101 (103)
T 3nzn_A 91 GFKEKEIRESL 101 (103)
T ss_dssp SCCHHHHHHHT
T ss_pred cCCHHHHHHHh
Confidence 35666655443
No 331
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=67.48 E-value=19 Score=28.13 Aligned_cols=63 Identities=17% Similarity=0.207 Sum_probs=36.8
Q ss_pred HHHHHHHHcCCeEEEEeec----CCCccchhhhhccCCCHHHHHHhhcc------EEEEEecCCChhHH-HHHHhcCCCC
Q 021955 127 KAKDAALAQDKWLLVNLQS----TKEFSSLMLNRDTWGNEAVSQIISVN------FIFWQEYDDTSEGW-KVCSFYNMDS 195 (305)
Q Consensus 127 ~A~~~Ak~~~KwLLVniq~----~~~f~c~~lnRDvw~n~~V~~~i~~n------FIfwq~~~ds~eg~-~~~~~Y~~~~ 195 (305)
+.++..-+.++ |+||..+ ++|..|... +++++++ |..+-+.. .++.+ .+.......+
T Consensus 7 ~~v~~~i~~~~-Vvvfsk~t~~~p~Cp~C~~a----------k~lL~~~gv~~~~~~~~dv~~-~~~~~~~l~~~sg~~t 74 (121)
T 3gx8_A 7 KAIEDAIESAP-VVLFMKGTPEFPKCGFSRAT----------IGLLGNQGVDPAKFAAYNVLE-DPELREGIKEFSEWPT 74 (121)
T ss_dssp HHHHHHHHSCS-EEEEESBCSSSBCTTHHHHH----------HHHHHHHTBCGGGEEEEECTT-CHHHHHHHHHHHTCCS
T ss_pred HHHHHHhccCC-EEEEEeccCCCCCCccHHHH----------HHHHHHcCCCcceEEEEEecC-CHHHHHHHHHHhCCCC
Confidence 44455555665 6666666 488888766 4455442 55444432 23443 3445567788
Q ss_pred CceEEE
Q 021955 196 IPAVLV 201 (305)
Q Consensus 196 ~P~i~I 201 (305)
+|.|.|
T Consensus 75 vP~vfI 80 (121)
T 3gx8_A 75 IPQLYV 80 (121)
T ss_dssp SCEEEE
T ss_pred CCeEEE
Confidence 999864
No 332
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=66.68 E-value=16 Score=31.71 Aligned_cols=57 Identities=19% Similarity=0.224 Sum_probs=37.7
Q ss_pred EEEEEecCCChhHHHHHHhcCC----CCCceEEEEeCCCCeeEEEecCCCChHH--HHHHHHHHHhh
Q 021955 172 FIFWQEYDDTSEGWKVCSFYNM----DSIPAVLVIDPITGQKICSWCGMINPQP--LGEMLLPFMDR 232 (305)
Q Consensus 172 FIfwq~~~ds~eg~~~~~~Y~~----~~~P~i~IIdprTGe~~~~~~G~~~~~~--~l~~L~~fl~~ 232 (305)
+.|.-++.+. .+ ++++.+++ ..+|.|+|++. .|.+ ..+.+.++.+. +.+-|..|++.
T Consensus 169 ~~F~~~d~~~-~~-~~~~~fgl~~~~~~~P~v~i~~~-~~~k-y~~~~~~t~~~~~i~~F~~~~~~G 231 (252)
T 2h8l_A 169 LNFAVASRKT-FS-HELSDFGLESTAGEIPVVAIRTA-KGEK-FVMQEEFSRDGKALERFLQDYFDG 231 (252)
T ss_dssp CEEEEEETTT-TH-HHHGGGTCCCCSCSSCEEEEECT-TSCE-EECCSCCCTTSHHHHHHHHHHHHT
T ss_pred EEEEEEchHH-HH-HHHHHcCCCCccCCCCEEEEEeC-cCcE-ecCCcccCcchHHHHHHHHHHHCC
Confidence 7776666552 23 47888888 36999999986 4543 34556666666 66666666653
No 333
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=66.37 E-value=22 Score=27.04 Aligned_cols=70 Identities=7% Similarity=0.098 Sum_probs=40.9
Q ss_pred HHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc---cEEEEEecCCC--hhH-HHHHHhcCCCCCce
Q 021955 125 FEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDT--SEG-WKVCSFYNMDSIPA 198 (305)
Q Consensus 125 f~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~---nFIfwq~~~ds--~eg-~~~~~~Y~~~~~P~ 198 (305)
..+.++...+.++.++ +..+||..|+.. +.++++ .|-..-++... .+- ..+...+...++|.
T Consensus 6 ~~~~~~~~i~~~~v~v--y~~~~Cp~C~~a----------k~~L~~~~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~ 73 (114)
T 3h8q_A 6 LRRHLVGLIERSRVVI--FSKSYCPHSTRV----------KELFSSLGVECNVLELDQVDDGARVQEVLSEITNQKTVPN 73 (114)
T ss_dssp HHHHHHHHHHHCSEEE--EECTTCHHHHHH----------HHHHHHTTCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCE
T ss_pred HHHHHHHHhccCCEEE--EEcCCCCcHHHH----------HHHHHHcCCCcEEEEecCCCChHHHHHHHHHHhCCCccCE
Confidence 3445555666666443 566899999766 344443 35544444321 122 23556778899999
Q ss_pred EEEEeCCCCeeE
Q 021955 199 VLVIDPITGQKI 210 (305)
Q Consensus 199 i~IIdprTGe~~ 210 (305)
|.| .|+.+
T Consensus 74 vfi----~g~~i 81 (114)
T 3h8q_A 74 IFV----NKVHV 81 (114)
T ss_dssp EEE----TTEEE
T ss_pred EEE----CCEEE
Confidence 976 46643
No 334
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=66.08 E-value=14 Score=27.68 Aligned_cols=59 Identities=15% Similarity=0.054 Sum_probs=33.6
Q ss_pred EEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhc-CCCCCceEEEEeCCCCeeE
Q 021955 141 VNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFY-NMDSIPAVLVIDPITGQKI 210 (305)
Q Consensus 141 Vniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y-~~~~~P~i~IIdprTGe~~ 210 (305)
+-+..+||..|++..+ +.+-.+-.|...-++.+......+...+ ...++|.|. |+ |+.+
T Consensus 19 ~vy~~~~Cp~C~~ak~-------~L~~~~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~if-i~---g~~i 78 (99)
T 3qmx_A 19 EIYTWSTCPFCMRALA-------LLKRKGVEFQEYCIDGDNEAREAMAARANGKRSLPQIF-ID---DQHI 78 (99)
T ss_dssp EEEECTTCHHHHHHHH-------HHHHHTCCCEEEECTTCHHHHHHHHHHTTTCCCSCEEE-ET---TEEE
T ss_pred EEEEcCCChhHHHHHH-------HHHHCCCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEEE-EC---CEEE
Confidence 3345679999988742 1122233465554443322233466666 789999884 44 5543
No 335
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=65.59 E-value=13 Score=29.95 Aligned_cols=43 Identities=12% Similarity=0.073 Sum_probs=31.6
Q ss_pred HHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 185 WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
.+.++.+++...|+++| +|+.+..-.|..+.++|++.|..-|+
T Consensus 140 ~~~a~~~gv~gTPtfiI----NGky~v~~~~~~s~e~~~~~i~~Ll~ 182 (184)
T 4dvc_A 140 DKQFQDSGLTGVPAVVV----NNRYLVQGQSAKSLDEYFDLVNYLLT 182 (184)
T ss_dssp HHHHHHHTCCSSSEEEE----TTTEEECGGGCSSHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCcCCEEEE----CCEEeeCCcCCCCHHHHHHHHHHHHh
Confidence 46777899999999875 57765555566788998887765443
No 336
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=64.69 E-value=10 Score=32.05 Aligned_cols=46 Identities=11% Similarity=0.000 Sum_probs=29.1
Q ss_pred cCCeEEEEeec-CCCccch-h-hhhccCCCHHHHHH-hhccE-EEEEecCCChh
Q 021955 135 QDKWLLVNLQS-TKEFSSL-M-LNRDTWGNEAVSQI-ISVNF-IFWQEYDDTSE 183 (305)
Q Consensus 135 ~~KwLLVniq~-~~~f~c~-~-lnRDvw~n~~V~~~-i~~nF-Ifwq~~~ds~e 183 (305)
.+||++++++- .+++.|. . ++. . ++...+| -..+. .++.++.|++.
T Consensus 42 ~gk~vVL~fyP~~fTp~Ct~~e~~~-f--~~~~~~f~~~~g~~~V~gvS~D~~~ 92 (182)
T 1xiy_A 42 NNKKILLISLPGAFTPTCSTKMIPG-Y--EEEYDYFIKENNFDDIYCITNNDIY 92 (182)
T ss_dssp TTCEEEEEECSCTTCHHHHHTHHHH-H--HHTHHHHHTTSCCSEEEEEESSCHH
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHH-H--HHHHHHHHHhCCCcEEEEEeCCCHH
Confidence 57899888874 5788887 2 321 1 3344555 45566 47777777753
No 337
>2di0_A Activating signal cointegrator 1 complex subunit 2; ASCC2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=63.76 E-value=17 Score=26.48 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=38.6
Q ss_pred hhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021955 6 IDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (305)
Q Consensus 6 ~~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 49 (305)
.+-+++|.+-.+|=-.-...-.+++|+.+|.|.|.+|+..|++.
T Consensus 11 ~~l~s~I~qV~DLfPdLG~gfi~~~L~~y~~nvE~vin~LLE~~ 54 (71)
T 2di0_A 11 VELDSLISQVKDLLPDLGEGFILACLEYYHYDPEQVINNILEER 54 (71)
T ss_dssp HHHHHHHHHHHHHCCSSCHHHHHHHHHHTTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcccCCHHHHHHHHHHhCCCHHHHHHHHHccC
Confidence 45677888888887777899999999999999999999999953
No 338
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=62.93 E-value=15 Score=28.65 Aligned_cols=66 Identities=23% Similarity=0.297 Sum_probs=38.6
Q ss_pred cHHHHHHHHHHcCCeEEEEeec----CCCccchhhhhccCCCHHHHHHhhcc----EEEEEecCCChhHHH-HHHhcCCC
Q 021955 124 SFEKAKDAALAQDKWLLVNLQS----TKEFSSLMLNRDTWGNEAVSQIISVN----FIFWQEYDDTSEGWK-VCSFYNMD 194 (305)
Q Consensus 124 sf~~A~~~Ak~~~KwLLVniq~----~~~f~c~~lnRDvw~n~~V~~~i~~n----FIfwq~~~ds~eg~~-~~~~Y~~~ 194 (305)
...+.++..-++++ |+||-.+ ++|..|... ++++++. |..+-++. .++... +.......
T Consensus 8 ~~~~~v~~~i~~~~-Vvvfsk~t~~~p~Cp~C~~a----------k~lL~~~gv~~~~~vdV~~-d~~~~~~l~~~tg~~ 75 (118)
T 2wem_A 8 GSAEQLDALVKKDK-VVVFLKGTPEQPQCGFSNAV----------VQILRLHGVRDYAAYNVLD-DPELRQGIKDYSNWP 75 (118)
T ss_dssp -CHHHHHHHHHHSS-EEEEESBCSSSBSSHHHHHH----------HHHHHHTTCCCCEEEESSS-CHHHHHHHHHHHTCC
T ss_pred cHHHHHHHHhccCC-EEEEEecCCCCCccHHHHHH----------HHHHHHcCCCCCEEEEcCC-CHHHHHHHHHHhCCC
Confidence 34555666666666 5666665 478888665 4566553 44444432 244443 44455678
Q ss_pred CCceEEE
Q 021955 195 SIPAVLV 201 (305)
Q Consensus 195 ~~P~i~I 201 (305)
++|.|.|
T Consensus 76 tvP~vfI 82 (118)
T 2wem_A 76 TIPQVYL 82 (118)
T ss_dssp SSCEEEE
T ss_pred CcCeEEE
Confidence 8999853
No 339
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=60.60 E-value=27 Score=26.42 Aligned_cols=66 Identities=11% Similarity=0.112 Sum_probs=39.0
Q ss_pred HHHHHHHHHHcCCeEEEEeec----CCCccchhhhhccCCCHHHHHHhhc---cEEEEEecCCChhHHHHHHhcCCCCCc
Q 021955 125 FEKAKDAALAQDKWLLVNLQS----TKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEGWKVCSFYNMDSIP 197 (305)
Q Consensus 125 f~~A~~~Ak~~~KwLLVniq~----~~~f~c~~lnRDvw~n~~V~~~i~~---nFIfwq~~~ds~eg~~~~~~Y~~~~~P 197 (305)
..+.+...-+.++ |+||..+ ++|..|+.. ++++++ .|...-++.+..--..+.......++|
T Consensus 7 ~~~~v~~~i~~~~-Vvvy~k~t~~~p~Cp~C~~a----------k~~L~~~gi~~~~~dI~~~~~~~~~l~~~~g~~tvP 75 (109)
T 3ipz_A 7 LKDTLEKLVNSEK-VVLFMKGTRDFPMCGFSNTV----------VQILKNLNVPFEDVNILENEMLRQGLKEYSNWPTFP 75 (109)
T ss_dssp HHHHHHHHHTSSS-EEEEESBCSSSBSSHHHHHH----------HHHHHHTTCCCEEEEGGGCHHHHHHHHHHHTCSSSC
T ss_pred HHHHHHHHHccCC-EEEEEecCCCCCCChhHHHH----------HHHHHHcCCCcEEEECCCCHHHHHHHHHHHCCCCCC
Confidence 3445555556665 6667666 488888765 455554 355554443322233455566778999
Q ss_pred eEEE
Q 021955 198 AVLV 201 (305)
Q Consensus 198 ~i~I 201 (305)
.|.|
T Consensus 76 ~ifi 79 (109)
T 3ipz_A 76 QLYI 79 (109)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 7753
No 340
>2cos_A Serine/threonine protein kinase LATS2; UBA domain, structure genomics, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=60.33 E-value=11 Score=26.10 Aligned_cols=41 Identities=15% Similarity=0.126 Sum_probs=34.0
Q ss_pred chhhHHHHHhhhccccCCCHHHHHHHHHHcCC-CHHHHHHHHHh
Q 021955 5 SIDKESRISSFLEIAVGASGVTAIECLQATSW-KLDEAILLFFA 47 (305)
Q Consensus 5 s~~~~~~i~~F~~iTtg~~~~~A~~~Le~~~w-dLe~Av~~ff~ 47 (305)
++.....+++.+++ |.+.+.|..-|+.+|. .|+.|++-..-
T Consensus 6 ~~vn~qmlq~L~eM--GFd~erae~Alk~Tg~~Gle~AmewL~k 47 (54)
T 2cos_A 6 SGVNRQMLQELVNA--GCDQEMAGRALKQTGSRSIEAALEYISK 47 (54)
T ss_dssp CSCCHHHHHHHHHH--HCCHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHc--CCCHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 45667779999999 9999999999999985 59999875443
No 341
>1p3q_Q VPS9P, vacuolar protein sorting-associated protein VPS9; trafficking, post translational modification, mono- ubiquitination; 1.70A {Saccharomyces cerevisiae} SCOP: a.5.2.4 PDB: 1mn3_A
Probab=56.44 E-value=5.4 Score=27.64 Aligned_cols=41 Identities=2% Similarity=0.108 Sum_probs=32.3
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021955 7 DKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFA 47 (305)
Q Consensus 7 ~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~ 47 (305)
++.+.|.++.++=-.-|.++=+..|++++||++.||+..+.
T Consensus 11 e~~~~~~~L~~MFP~lD~evI~~Vl~a~~G~~~~~IdaLLq 51 (54)
T 1p3q_Q 11 ERKDTLNTLQNMFPDMDPSLIEDVCIAAASRIGPCVDALLS 51 (54)
T ss_dssp HHHHHHHHHHHHSTTSCHHHHHHHHHHSCC--CGGGC----
T ss_pred HHHHHHHHHHHHcccCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 56788999999988899999999999999999999987765
No 342
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*
Probab=55.33 E-value=18 Score=33.16 Aligned_cols=45 Identities=16% Similarity=0.305 Sum_probs=37.4
Q ss_pred CCchhhHHHHHhhhccc------cCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021955 3 SESIDKESRISSFLEIA------VGASGVTAIECLQATSWKLDEAILLFFA 47 (305)
Q Consensus 3 ~~s~~~~~~i~~F~~iT------tg~~~~~A~~~Le~~~wdLe~Av~~ff~ 47 (305)
.++++|.+.|.+|.+.- ...|...-.+||.+++||++.|...+-.
T Consensus 34 ~lt~~q~~~l~~lR~~l~~~~~~~~~dD~~LLRFLRArkfdv~kA~~mL~~ 84 (320)
T 3q8g_A 34 NLTKEQEEALLQFRSILLEKNYKERLDDSTLLRFLRARKFDINASVEMFVE 84 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCCSSCSHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 35788999999998652 2468889999999999999999998854
No 343
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=55.28 E-value=18 Score=30.06 Aligned_cols=44 Identities=14% Similarity=0.271 Sum_probs=34.2
Q ss_pred HHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 184 GWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 184 g~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
..+.++.+++...|+++| .|+.+....|..+.+.|.+.|...++
T Consensus 141 ~~~~a~~~gv~GtPtfvv----ng~~~v~~~Ga~~~e~~~~~i~~ll~ 184 (185)
T 3feu_A 141 AKMLSEKSGISSVPTFVV----NGKYNVLIGGHDDPKQIADTIRYLLE 184 (185)
T ss_dssp HHHHHHHHTCCSSSEEEE----TTTEEECGGGCSSHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCccCEEEE----CCEEEEecCCCCCHHHHHHHHHHHHh
Confidence 345667889999999986 47765555898999999988877664
No 344
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=54.05 E-value=21 Score=29.84 Aligned_cols=56 Identities=2% Similarity=-0.282 Sum_probs=32.3
Q ss_pred cCCeEEEEeec-CCCccchhhhhccCCCHHHHHHhhccE-EEEEecCCChhHH-HHHHhcC
Q 021955 135 QDKWLLVNLQS-TKEFSSLMLNRDTWGNEAVSQIISVNF-IFWQEYDDTSEGW-KVCSFYN 192 (305)
Q Consensus 135 ~~KwLLVniq~-~~~f~c~~lnRDvw~n~~V~~~i~~nF-Ifwq~~~ds~eg~-~~~~~Y~ 192 (305)
.+||++++++- .+++.|..=-+.. ++...+|-+.+. .++.++.|++... +++..++
T Consensus 41 ~gk~vVL~fyP~~fTp~Ct~e~~~f--~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~~ 99 (171)
T 2xhf_A 41 RGRKGILFSVVGAFVPGSNNHIPEY--LSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTVD 99 (171)
T ss_dssp TTSEEEEEECSCTTCTTTTSSHHHH--HHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHHC
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHH--HHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcC
Confidence 47898888885 4677774322221 233445555567 4788888876433 3444443
No 345
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=52.88 E-value=27 Score=30.16 Aligned_cols=48 Identities=4% Similarity=0.085 Sum_probs=34.8
Q ss_pred HHHHHh-cCCCCCceEEEEeCCCCeeEE-----EecCCCChHHHHHHHHHHHhhC
Q 021955 185 WKVCSF-YNMDSIPAVLVIDPITGQKIC-----SWCGMINPQPLGEMLLPFMDRS 233 (305)
Q Consensus 185 ~~~~~~-Y~~~~~P~i~IIdprTGe~~~-----~~~G~~~~~~~l~~L~~fl~~~ 233 (305)
.+.++. +++...|+++|+++ .|+.+. ...|+.+++.|.+.|...+..-
T Consensus 160 ~~~a~~~~GV~GtPtfvv~~~-nG~~~~Ga~~~~~~G~~~~e~l~~~I~~~l~~~ 213 (226)
T 3f4s_A 160 KSLAINKLGITAVPIFFIKLN-DDKSYIEHNKVKHGGYKELKYFTNVIDKLYGKA 213 (226)
T ss_dssp HHHHHHHHCCCSSCEEEEEEC-CTTCCCCGGGGEEESCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcCCEEEEEcC-CCEEeeCCCCcccccccCHHHHHHHHHHHHhcC
Confidence 356667 99999999999874 476541 2345555999999998887653
No 346
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=52.15 E-value=42 Score=26.46 Aligned_cols=62 Identities=10% Similarity=0.071 Sum_probs=36.6
Q ss_pred HHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhcc------EEEEEecCCC--hhHHHHH-HhcCCCCCce
Q 021955 128 AKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN------FIFWQEYDDT--SEGWKVC-SFYNMDSIPA 198 (305)
Q Consensus 128 A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~n------FIfwq~~~ds--~eg~~~~-~~Y~~~~~P~ 198 (305)
.+....+.++ |.||. .++|..|... ++++++. |...-++.+. .+-..+. ..+...++|.
T Consensus 6 ~~~~ii~~~~-Vvvys-k~~Cp~C~~a----------k~lL~~~~~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~ 73 (127)
T 3l4n_A 6 EYSLILDLSP-IIIFS-KSTCSYSKGM----------KELLENEYQFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPN 73 (127)
T ss_dssp HHHHHHTSCS-EEEEE-CTTCHHHHHH----------HHHHHHHEEEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCE
T ss_pred HHHHHHccCC-EEEEE-cCCCccHHHH----------HHHHHHhcccCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcce
Confidence 3444455555 55554 4689999766 4566653 5555555432 2334433 4557789999
Q ss_pred EEE
Q 021955 199 VLV 201 (305)
Q Consensus 199 i~I 201 (305)
|.|
T Consensus 74 IfI 76 (127)
T 3l4n_A 74 LLV 76 (127)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
No 347
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1
Probab=51.93 E-value=24 Score=31.42 Aligned_cols=44 Identities=14% Similarity=0.161 Sum_probs=35.8
Q ss_pred CchhhHHHHHhhhccc------cCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021955 4 ESIDKESRISSFLEIA------VGASGVTAIECLQATSWKLDEAILLFFA 47 (305)
Q Consensus 4 ~s~~~~~~i~~F~~iT------tg~~~~~A~~~Le~~~wdLe~Av~~ff~ 47 (305)
+++++.+.|.+|.+.- ...|...-.+||.+++||++.|...+-.
T Consensus 26 l~~~q~~~l~~lr~~l~~~~~~~~~dd~~LlRFLrarkfdv~~A~~~l~~ 75 (296)
T 1aua_A 26 LDSAQEKALAELRKLLEDAGFIERLDDSTLLRFLRARKFDVQLAKEMFEN 75 (296)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCCSSCSHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4678888999986642 2367899999999999999999988744
No 348
>2lbc_A Ubiquitin carboxyl-terminal hydrolase 13; tandem UBA of USP13; NMR {Homo sapiens}
Probab=49.38 E-value=17 Score=28.74 Aligned_cols=40 Identities=18% Similarity=0.086 Sum_probs=35.2
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCC-CHHHHHHHHHhcCC
Q 021955 9 ESRISSFLEIAVGASGVTAIECLQATSW-KLDEAILLFFAVNE 50 (305)
Q Consensus 9 ~~~i~~F~~iTtg~~~~~A~~~Le~~~w-dLe~Av~~ff~~~~ 50 (305)
.+.|.+.+++ |=+...|+.-|..+++ |++.|++-.+.+.+
T Consensus 4 ~~~l~~L~~M--GF~~~~a~~AL~~t~n~~~e~A~~wL~~~~~ 44 (126)
T 2lbc_A 4 ESSVMQLAEM--GFPLEACRKAVYFTGNMGAEVAFNWIIVHME 44 (126)
T ss_dssp THHHHHHHTT--SSCCHHHHHHHHHHTSCCHHHHHHHHHHGGG
T ss_pred HHHHHHHHHc--CCCHHHHHHHHHHcCCCCHHHHHHHHHHhcc
Confidence 4678999998 9999999999999976 99999999888754
No 349
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=47.65 E-value=15 Score=30.56 Aligned_cols=40 Identities=10% Similarity=-0.090 Sum_probs=30.4
Q ss_pred CCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc---cEEEEEecCCC
Q 021955 136 DKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDT 181 (305)
Q Consensus 136 ~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~---nFIfwq~~~ds 181 (305)
+|..+|.+.+.+|..|..+.. .+.+++++ +++|..+.+..
T Consensus 24 ~~v~vv~f~d~~Cp~C~~~~~------~l~~~~~~~~~~v~~~~~p~~~ 66 (193)
T 3hz8_A 24 GKVEVLEFFGYFCPHCAHLEP------VLSKHAKSFKDDMYLRTEHVVW 66 (193)
T ss_dssp TSEEEEEEECTTCHHHHHHHH------HHHHHHTTCCTTEEEEEEECCC
T ss_pred CCcEEEEEECCCChhHHHHHH------HHHHHHHHCCCCeEEEEecCCC
Confidence 689999999999999999964 45555543 57777776653
No 350
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=47.47 E-value=42 Score=25.25 Aligned_cols=109 Identities=11% Similarity=0.093 Sum_probs=61.3
Q ss_pred CCccccccccHHHHHHHHHHcCCeEEEEeecCCCc----cc-----hhhhhccCCCHHHHHHhhccEEEEEecCCChhHH
Q 021955 115 PPFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKEF----SS-----LMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGW 185 (305)
Q Consensus 115 PP~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f----~c-----~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~ 185 (305)
++..+-...+..+|+..-++.+.--++-+.+...+ .- ..+....+.+..|.+++..+++....+..-.+..
T Consensus 17 ~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~ 96 (138)
T 2p9m_A 17 NVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKYTLETTIGDVMTKDVITIHEDASILEAI 96 (138)
T ss_dssp SCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSCSSCCCEETTSBHHHHH
T ss_pred CceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhcccCCcCHHHHhCCCcEEECCCCCHHHHH
Confidence 33334446689999887765543333333322222 11 1222234567789999988877766544444555
Q ss_pred HHHHhcC--CCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021955 186 KVCSFYN--MDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLP 228 (305)
Q Consensus 186 ~~~~~Y~--~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~ 228 (305)
+....++ -..+.++.|+|. .|+. .|.++..+++..+.+
T Consensus 97 ~~~~~~~~~~~~~~~l~Vvd~-~g~~----~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 97 KKMDISGKKEEIINQLPVVDK-NNKL----VGIISDGDIIRTISK 136 (138)
T ss_dssp HHHTCC-----CCCEEEEECT-TSBE----EEEEEHHHHHHHHHH
T ss_pred HHHHhcCCccccccEEEEECC-CCeE----EEEEEHHHHHHHHHh
Confidence 5444433 011678888985 4653 466788888776643
No 351
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*
Probab=46.57 E-value=11 Score=32.86 Aligned_cols=45 Identities=18% Similarity=0.087 Sum_probs=30.5
Q ss_pred CCchhhHHHHHhhhcccc---------CCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021955 3 SESIDKESRISSFLEIAV---------GASGVTAIECLQATSWKLDEAILLFFA 47 (305)
Q Consensus 3 ~~s~~~~~~i~~F~~iTt---------g~~~~~A~~~Le~~~wdLe~Av~~ff~ 47 (305)
++|+.+.+.|.+|.+... ..|.....+||.+++||++.|...+-.
T Consensus 3 ~ls~~~~~~l~~lr~~l~~~~~~~~~~~~dd~~LlRFLra~k~dv~~A~~~l~~ 56 (262)
T 1r5l_A 3 HMSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKN 56 (262)
T ss_dssp ------CTTHHHHHHHHHHHTCCCSSSCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHhCCcccCCCCCCHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 456667777777754421 258899999999999999999997744
No 352
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=46.49 E-value=30 Score=32.33 Aligned_cols=45 Identities=16% Similarity=0.185 Sum_probs=36.1
Q ss_pred CCchhhHHHHHhhhccc-------cCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021955 3 SESIDKESRISSFLEIA-------VGASGVTAIECLQATSWKLDEAILLFFA 47 (305)
Q Consensus 3 ~~s~~~~~~i~~F~~iT-------tg~~~~~A~~~Le~~~wdLe~Av~~ff~ 47 (305)
++++++.+.|.+|.+.- --.|...-.+||.+++||++.|...+-.
T Consensus 7 ~l~~~q~~~l~~lr~~l~~~~~~l~~~dD~~LlRFLrarkfdv~~A~~~l~~ 58 (403)
T 1olm_A 7 DLSPRQKEALAKFRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAMLRK 58 (403)
T ss_dssp BCCHHHHHHHHHHHHHHGGGGGGSSCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhhccCCCCCChhHHHHHHHhcCCCHHHHHHHHHH
Confidence 34778888999886531 2468889999999999999999998754
No 353
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=45.23 E-value=6.8 Score=33.35 Aligned_cols=55 Identities=5% Similarity=-0.132 Sum_probs=33.6
Q ss_pred CCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCC---hhHHHHHHh
Q 021955 136 DKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT---SEGWKVCSF 190 (305)
Q Consensus 136 ~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds---~eg~~~~~~ 190 (305)
.|..||.+.+.||..|..|.-.+=-.+.+.+-+..+..|..++++. +.+...++.
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~~~~~~~~~a~a 170 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMGGDLGKDLTQA 170 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSSSHHHHHHHHHH
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcCCccchHHHHHH
Confidence 5789999999999999999533212234444444455566665553 334444443
No 354
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=44.24 E-value=48 Score=28.09 Aligned_cols=43 Identities=16% Similarity=0.311 Sum_probs=33.2
Q ss_pred HHH-HhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCCC
Q 021955 186 KVC-SFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSPR 235 (305)
Q Consensus 186 ~~~-~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~~~ 235 (305)
+.+ +.+++...|+++| .|+. +.|..+++.|.+.|...+.++-.
T Consensus 158 ~~a~~~~GV~GtPtfvv----ng~~---~~G~~~~e~l~~~i~~~~~~~~~ 201 (205)
T 3gmf_A 158 DEAINQYNVSGTPSFMI----DGIL---LAGTHDWASLRPQILARLNEGHH 201 (205)
T ss_dssp HHHHHHHCCCSSSEEEE----TTEE---CTTCCSHHHHHHHHHHHHTC---
T ss_pred HHHHHHcCCccCCEEEE----CCEE---EeCCCCHHHHHHHHHHHhhcccc
Confidence 455 7889999999986 4663 68999999999999988877644
No 355
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=43.07 E-value=70 Score=25.06 Aligned_cols=65 Identities=8% Similarity=0.044 Sum_probs=45.1
Q ss_pred CCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 159 WGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 159 w~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
+.+..|.+++..+++....+..-.++.++....+ +.++.|+|. |+ +.|.++..+++..+...++.
T Consensus 75 ~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~---~~~lpVvd~--g~----lvGiit~~dil~~~~~~~~~ 139 (160)
T 2o16_A 75 AFETPLFEVMHTDVTSVAPQAGLKESAIYMQKHK---IGCLPVVAK--DV----LVGIITDSDFVTIAINLLEL 139 (160)
T ss_dssp -CCCBHHHHSCSCEEEBCTTSBHHHHHHHHHHTT---CSCEEEEET--TE----EEEEECHHHHHHHHHHHHHH
T ss_pred hcccCHHHHhcCCCeEECCCCCHHHHHHHHHHhC---CCEEEEEEC--CE----EEEEEEHHHHHHHHHHHhcc
Confidence 4566788998888877765554456666666655 455677885 65 45778899999888877653
No 356
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=42.13 E-value=73 Score=24.14 Aligned_cols=65 Identities=11% Similarity=0.139 Sum_probs=37.5
Q ss_pred HHHHHHHHHHcCCeEEEEeec----CCCccchhhhhccCCCHHHHHHhhc---cEEEEEecCCChhHH-HHHHhcCCCCC
Q 021955 125 FEKAKDAALAQDKWLLVNLQS----TKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEGW-KVCSFYNMDSI 196 (305)
Q Consensus 125 f~~A~~~Ak~~~KwLLVniq~----~~~f~c~~lnRDvw~n~~V~~~i~~---nFIfwq~~~ds~eg~-~~~~~Y~~~~~ 196 (305)
..+.++..-++++ |+||.-+ ++|..|... ++++++ .|...-++.+ ++.. .+.......++
T Consensus 5 ~~~~v~~~i~~~~-Vvlf~kg~~~~~~Cp~C~~a----------k~~L~~~gi~y~~~di~~d-~~~~~~l~~~~g~~tv 72 (111)
T 3zyw_A 5 LNLRLKKLTHAAP-CMLFMKGTPQEPRCGFSKQM----------VEILHKHNIQFSSFDIFSD-EEVRQGLKAYSSWPTY 72 (111)
T ss_dssp HHHHHHHHHTSSS-EEEEESBCSSSBSSHHHHHH----------HHHHHHTTCCCEEEEGGGC-HHHHHHHHHHHTCCSS
T ss_pred HHHHHHHHHhcCC-EEEEEecCCCCCcchhHHHH----------HHHHHHcCCCeEEEECcCC-HHHHHHHHHHHCCCCC
Confidence 3444555555554 5555542 688888766 345554 3665554443 4443 34445577889
Q ss_pred ceEEE
Q 021955 197 PAVLV 201 (305)
Q Consensus 197 P~i~I 201 (305)
|.|.|
T Consensus 73 P~ifi 77 (111)
T 3zyw_A 73 PQLYV 77 (111)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 99864
No 357
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=41.13 E-value=62 Score=24.54 Aligned_cols=104 Identities=13% Similarity=0.128 Sum_probs=60.7
Q ss_pred ccccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccC----------------------CCHHHHHHhhccEEEEE
Q 021955 119 VMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTW----------------------GNEAVSQIISVNFIFWQ 176 (305)
Q Consensus 119 l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw----------------------~n~~V~~~i~~nFIfwq 176 (305)
+-...+..+|+..-.+.+-.-++-+.....+---.--+|+. .+..|.+++..+++...
T Consensus 20 v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~ 99 (152)
T 4gqw_A 20 VKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVE 99 (152)
T ss_dssp BCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC-----CCBHHHHSEESCCCEE
T ss_pred ECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHhccccHHHhcCCCceEEC
Confidence 34466788888877665543333333333321111122222 24568899988887765
Q ss_pred ecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021955 177 EYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 177 ~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl 230 (305)
.+..-.+..++...++ +.++.|+|. .|+ +.|.++..+++..+....
T Consensus 100 ~~~~l~~a~~~~~~~~---~~~l~Vvd~-~g~----~~Giit~~dil~~~~~~~ 145 (152)
T 4gqw_A 100 EKTNLEDAAKILLETK---YRRLPVVDS-DGK----LVGIITRGNVVRAALQIK 145 (152)
T ss_dssp SSSBHHHHHHHHHHSS---CCEEEEECT-TSB----EEEEEEHHHHHHHHHC--
T ss_pred CCCcHHHHHHHHHHCC---CCEEEEECC-CCc----EEEEEEHHHHHHHHHhcc
Confidence 5544456666665554 577888884 465 346678888888776543
No 358
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=40.03 E-value=10 Score=34.50 Aligned_cols=41 Identities=7% Similarity=-0.053 Sum_probs=28.5
Q ss_pred HcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEe
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQE 177 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~ 177 (305)
..+|..++.|.|++|+.|++|.+++ .+.+.+ ++=++|+|.+
T Consensus 145 ~~gk~~I~vFtDp~CPYCkkl~~~l--~~~l~~-~~Vr~i~~Pi 185 (273)
T 3tdg_A 145 ANKDKILYIVSDPMCPHCQKELTKL--RDHLKE-NTVRMVVVGW 185 (273)
T ss_dssp GGTTCEEEEEECTTCHHHHHHHHTH--HHHHHH-CEEEEEECCC
T ss_pred CCCCeEEEEEECcCChhHHHHHHHH--HHHhhC-CcEEEEEeec
Confidence 5688999999999999999997654 223333 3334555544
No 359
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.09 E-value=60 Score=24.49 Aligned_cols=57 Identities=11% Similarity=0.050 Sum_probs=31.5
Q ss_pred EEEEeecCCCccchhhhhccCCCHHHHHHhhcc-EEEEEecCCC-hhHHH-HHHhc--------CCCCCceEE
Q 021955 139 LLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN-FIFWQEYDDT-SEGWK-VCSFY--------NMDSIPAVL 200 (305)
Q Consensus 139 LLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~n-FIfwq~~~ds-~eg~~-~~~~Y--------~~~~~P~i~ 200 (305)
|.|| ..++|..|+...+ ...++++++++ +=|-.++++. ++..+ +...+ ....+|.|.
T Consensus 10 V~vy-~~~~C~~C~~~~~----~~~ak~~L~~~gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~vf 77 (111)
T 2ct6_A 10 IRVF-IASSSGFVAIKKK----QQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQIF 77 (111)
T ss_dssp EEEE-ECSSCSCHHHHHH----HHHHHHHHHHTTCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEEE
T ss_pred EEEE-EcCCCCCcccchh----HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEEE
Confidence 4455 4568999984321 22456677764 2233344443 44444 55554 556799886
No 360
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=38.76 E-value=57 Score=27.34 Aligned_cols=41 Identities=10% Similarity=0.126 Sum_probs=33.1
Q ss_pred HHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 185 WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
.+.++.+++...|+++| .|+. +.|..+++.|.+.|.+.+.+
T Consensus 153 ~~~a~~~gV~gtPtfvv----nG~~---~~G~~~~e~l~~~i~~~~~~ 193 (202)
T 3gha_A 153 SDLNQKMNIQATPTIYV----NDKV---IKNFADYDEIKETIEKELKG 193 (202)
T ss_dssp HHHHHHTTCCSSCEEEE----TTEE---CSCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCcCCEEEE----CCEE---ecCCCCHHHHHHHHHHHHHh
Confidence 35667889999999987 4664 56888999999998888765
No 361
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=38.12 E-value=65 Score=23.14 Aligned_cols=58 Identities=10% Similarity=0.063 Sum_probs=31.2
Q ss_pred EEEEeecCCCccchhhhhccCCCHHHHHHhhcc-EEEEEecCCC-hhHH-HHHHhcC--CCCCceEEE
Q 021955 139 LLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN-FIFWQEYDDT-SEGW-KVCSFYN--MDSIPAVLV 201 (305)
Q Consensus 139 LLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~n-FIfwq~~~ds-~eg~-~~~~~Y~--~~~~P~i~I 201 (305)
|.|| ..++|..|....+ ...++++++++ .-|-.++++. ++.. .+...+. ..++|.|.|
T Consensus 4 v~ly-~~~~C~~c~~~~~----~~~ak~~L~~~~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi 66 (93)
T 1t1v_A 4 LRVY-STSVTGSREIKSQ----QSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNPKATPPQIVN 66 (93)
T ss_dssp EEEE-ECSSCSCHHHHHH----HHHHHHHHHHTTCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEEE
T ss_pred EEEE-EcCCCCCchhhHH----HHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEEE
Confidence 4444 4568999942221 23445666654 2223334443 3443 4566676 569998853
No 362
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=37.49 E-value=54 Score=23.20 Aligned_cols=45 Identities=18% Similarity=0.156 Sum_probs=27.2
Q ss_pred CCccchhhhhccCCCHHHHHHhhc---cEEEEEecC----CChhH-HHHHHhcCCC-----CCceEEE
Q 021955 147 KEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYD----DTSEG-WKVCSFYNMD-----SIPAVLV 201 (305)
Q Consensus 147 ~~f~c~~lnRDvw~n~~V~~~i~~---nFIfwq~~~----ds~eg-~~~~~~Y~~~-----~~P~i~I 201 (305)
+|..|+.. +.++++ .|-+.-++. ..++. ..+...+... ++|.|.|
T Consensus 13 ~Cp~C~~a----------k~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i 70 (87)
T 1aba_A 13 KCGPCDNA----------KRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFA 70 (87)
T ss_dssp CCHHHHHH----------HHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEEC
T ss_pred cCccHHHH----------HHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEE
Confidence 78888655 455554 355554441 12333 3466677777 8999875
No 363
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=37.45 E-value=34 Score=33.58 Aligned_cols=83 Identities=7% Similarity=0.188 Sum_probs=47.5
Q ss_pred HcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEe
Q 021955 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSW 213 (305)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~ 213 (305)
...++++|.+.+.... +- .+...++.....|.+..-.++ ...+++.|++..||+++++++ .|+. ...
T Consensus 155 ~~~~~vallF~~~~s~----~~-----~~~~ldl~~~~~v~v~~v~~~--~~~l~~kfgV~~~Pslvl~~~-nGk~-~~~ 221 (519)
T 3t58_A 155 NKADYLALVFEREDSY----LG-----REVTLDLSQYHAVAVRRVLNT--ESDLVNKFGVTDFPSCYLLLR-NGSV-SRV 221 (519)
T ss_dssp CCCSEEEEEEECTTCC----HH-----HHHHHHTTTCTTEEEEEEETT--CHHHHHHHTCCCSSEEEEEET-TSCE-EEC
T ss_pred CCCCeEEEEecCCchH----HH-----HHHHHHhhccCCeeEEEecCc--hHHHHHHcCCCCCCeEEEEeC-CCce-eec
Confidence 6678888888875411 11 223344444333544443332 356899999999999999996 4653 333
Q ss_pred cCCCChHHHHHHHHHHHhh
Q 021955 214 CGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 214 ~G~~~~~~~l~~L~~fl~~ 232 (305)
....+...++. .+|.+
T Consensus 222 ~v~~~~r~~~~---~~l~~ 237 (519)
T 3t58_A 222 PVLVESRSFYT---SYLRG 237 (519)
T ss_dssp CCSSCSHHHHH---HHHTT
T ss_pred ccccccHHHHH---HHHHH
Confidence 33333334433 44554
No 364
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=37.28 E-value=25 Score=27.16 Aligned_cols=105 Identities=13% Similarity=0.193 Sum_probs=61.3
Q ss_pred cccccccHHHHHHHHHHcC-CeEEEEeecCCCc----cchhh----------hhccCCCHHHHHHhhccEEEEEecCCCh
Q 021955 118 HVMFNGSFEKAKDAALAQD-KWLLVNLQSTKEF----SSLML----------NRDTWGNEAVSQIISVNFIFWQEYDDTS 182 (305)
Q Consensus 118 ~l~~~gsf~~A~~~Ak~~~-KwLLVniq~~~~f----~c~~l----------nRDvw~n~~V~~~i~~nFIfwq~~~ds~ 182 (305)
-+-...+..+|+..-.+.+ ..+.| +...+.+ .-.-+ ....+.+..|.+++..+++....+..-.
T Consensus 29 ~v~~~~~l~~a~~~~~~~~~~~~pV-vd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~ 107 (150)
T 3lqn_A 29 HVQIGNGLEHALLVLVKSGYSAIPV-LDPMYKLHGLISTAMILDGILGLERIEFERLEEMKVEQVMKQDIPVLKLEDSFA 107 (150)
T ss_dssp CBCTTSBHHHHHHHHHHHTCSEEEE-ECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBGGGTCBSSCCEEETTCBHH
T ss_pred EECCCCcHHHHHHHHHHcCCcEEEE-ECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcCCHHHHhcCCCceeCCCCCHH
Confidence 3344667888888765554 34433 3222221 11111 1122345567788887777776655556
Q ss_pred hHHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021955 183 EGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (305)
Q Consensus 183 eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~ 233 (305)
+..++...+++ +.|+|. .|+ +.|.++..+++..+...+.+.
T Consensus 108 ~a~~~~~~~~~-----l~Vvd~-~g~----~~Giit~~dil~~l~~~~~~~ 148 (150)
T 3lqn_A 108 KALEMTIDHPF-----ICAVNE-DGY----FEGILTRRAILKLLNKKVRQH 148 (150)
T ss_dssp HHHHHHHHCSE-----EEEECT-TCB----EEEEEEHHHHHHHHHHHC---
T ss_pred HHHHHHHhCCE-----EEEECC-CCc----EEEEEEHHHHHHHHHHHhHhh
Confidence 77777665553 778884 465 346788999998888776543
No 365
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=36.19 E-value=52 Score=25.62 Aligned_cols=104 Identities=12% Similarity=0.052 Sum_probs=60.4
Q ss_pred ccccccHHHHHHHHHHcCCeEEEEeecCCCc----cchhhhhc----------cCCCHHHHHHhhccEEEEEecCCChhH
Q 021955 119 VMFNGSFEKAKDAALAQDKWLLVNLQSTKEF----SSLMLNRD----------TWGNEAVSQIISVNFIFWQEYDDTSEG 184 (305)
Q Consensus 119 l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f----~c~~lnRD----------vw~n~~V~~~i~~nFIfwq~~~ds~eg 184 (305)
+--..+..+|+..-.+.+-.-++-+.+...+ .-.-+-+- -+.+..|.+++..+++....+..-.+.
T Consensus 29 v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a 108 (159)
T 1yav_A 29 VQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEEVMLTDIPRLHINDPIMKG 108 (159)
T ss_dssp EETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHHHHSBCSCCEEETTSBHHHH
T ss_pred ECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCHHHhcCCCCceEcCCCCHHHH
Confidence 3346678888887766554444334332222 11111111 145678999998888777654444455
Q ss_pred HHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 185 WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
.++...+ +++.|+|. .|+. .|.++..+++..+...+..
T Consensus 109 ~~~m~~~-----~~lpVvd~-~g~~----vGiit~~dil~~~~~~~~~ 146 (159)
T 1yav_A 109 FGMVINN-----GFVCVEND-EQVF----EGIFTRRVVLKELNKHIRS 146 (159)
T ss_dssp HHHTTTC-----SEEEEECT-TCBE----EEEEEHHHHHHHHHHHC--
T ss_pred HHHHHhC-----CEEEEEeC-CCeE----EEEEEHHHHHHHHHHHHHh
Confidence 5544433 23788885 4654 4667888998888776543
No 366
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=36.04 E-value=23 Score=28.69 Aligned_cols=42 Identities=10% Similarity=0.248 Sum_probs=29.6
Q ss_pred HHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
+.+..+++...|+++| + |+.+....|..+++.|.+.|...+.
T Consensus 153 ~~a~~~gv~gtPt~~i-n---g~~~~~~~g~~~~~~l~~~i~~~l~ 194 (195)
T 3c7m_A 153 ASYDVAKIQGVPAYVV-N---GKYLIYTKSIKSIDAMADLIRELAS 194 (195)
T ss_dssp GHHHHHHHHCSSEEEE-T---TTEEECGGGCCCHHHHHHHHHHHHT
T ss_pred HHHHHcCCCccCEEEE-C---CEEEeccCCCCCHHHHHHHHHHHHh
Confidence 3455677899999754 3 6644333487899999888887664
No 367
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=35.14 E-value=48 Score=26.87 Aligned_cols=40 Identities=13% Similarity=0.208 Sum_probs=29.0
Q ss_pred HHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 185 WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
.++++.+++...|+++| .|+. +.|..+++.|.+.|...+.
T Consensus 139 ~~~a~~~gv~GtPt~vv----nG~~---~~G~~~~~~l~~~i~~~~~ 178 (186)
T 3bci_A 139 KKIAKDNHIKTTPTAFI----NGEK---VEDPYDYESYEKLLKDKIK 178 (186)
T ss_dssp HHHHHHTTCCSSSEEEE----TTEE---CSCTTCHHHHHHHHHC---
T ss_pred HHHHHHcCCCCCCeEEE----CCEE---cCCCCCHHHHHHHHHHHHH
Confidence 45677889999999986 4764 4688889888888776664
No 368
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=34.75 E-value=87 Score=24.54 Aligned_cols=66 Identities=9% Similarity=0.187 Sum_probs=44.0
Q ss_pred CHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021955 161 NEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (305)
Q Consensus 161 n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~~ 234 (305)
+..|.+++..+++....+..-.+..+... -..+.++.|+|. .|+. .|.++..+++..+........
T Consensus 97 ~~~v~~~m~~~~~~v~~~~~l~~a~~~m~---~~~~~~lpVvd~-~g~~----vGiit~~dil~~~~~~~~~~~ 162 (180)
T 3sl7_A 97 GKVVGDLMTPSPLVVRDSTNLEDAARLLL---ETKFRRLPVVDA-DGKL----IGILTRGNVVRAALQIKRNAD 162 (180)
T ss_dssp TCBHHHHSEESCCCEETTSBHHHHHHHHT---TSTTCEEEEECT-TCBE----EEEEEHHHHHHHHHHHHHTC-
T ss_pred cccHHHHhCCCceEeCCCCcHHHHHHHHH---HcCCCEEEEECC-CCeE----EEEEEHHHHHHHHHHHhhhhh
Confidence 45688999888776654433344444443 345778889984 4663 466889999998888766543
No 369
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=34.50 E-value=74 Score=26.22 Aligned_cols=42 Identities=14% Similarity=0.135 Sum_probs=31.2
Q ss_pred HHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 184 GWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 184 g~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
..+.++.+++...|+++| .|+.+ +.|. +++.|++.|...+++
T Consensus 143 ~~~~a~~~gv~gtPt~vv----ng~~~--~~~~-~~e~l~~~i~~ll~k 184 (193)
T 3hz8_A 143 MQELTETFQIDGVPTVIV----GGKYK--VEFA-DWESGMNTIDLLADK 184 (193)
T ss_dssp HHHHHHHTTCCSSSEEEE----TTTEE--ECCS-SHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcCCEEEE----CCEEE--ecCC-CHHHHHHHHHHHHHH
Confidence 345677889999999986 36654 3354 889998888887764
No 370
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=32.76 E-value=1e+02 Score=24.39 Aligned_cols=58 Identities=12% Similarity=0.082 Sum_probs=36.7
Q ss_pred EEEEeecCCCccchhhhhccCCCHHHHHHhhcc-EEEEEecCC-ChhHH-HHHHhc--------CCCCCceEEE
Q 021955 139 LLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN-FIFWQEYDD-TSEGW-KVCSFY--------NMDSIPAVLV 201 (305)
Q Consensus 139 LLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~n-FIfwq~~~d-s~eg~-~~~~~Y--------~~~~~P~i~I 201 (305)
|.||.. +.|..|....| ...++.||+.+ .-|-.++++ +++.+ .+.+.+ .....|.|.|
T Consensus 2 V~vYtt-~~c~~c~~kk~----c~~aK~lL~~kgV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi 70 (121)
T 1u6t_A 2 IRVYIA-SSSGSTAIKKK----QQDVLGFLEANKIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIFN 70 (121)
T ss_dssp EEEEEC-TTCSCHHHHHH----HHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEEE
T ss_pred EEEEec-CCCCCccchHH----HHHHHHHHHHCCCceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEEEE
Confidence 456664 47999976543 45788999875 445566765 34444 456566 4567887663
No 371
>1q02_A Sequestosome 1; helical bundle, protein binding; NMR {Homo sapiens} SCOP: a.5.2.1 PDB: 2jy7_A 2jy8_A 2k0b_X 2knv_A 2rru_A 3b0f_A
Probab=32.01 E-value=31 Score=23.58 Aligned_cols=36 Identities=19% Similarity=0.259 Sum_probs=27.9
Q ss_pred hHHHHHhhhccccCCCHHHH--HHHHHHcCCCHHHHHHHH
Q 021955 8 KESRISSFLEIAVGASGVTA--IECLQATSWKLDEAILLF 45 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A--~~~Le~~~wdLe~Av~~f 45 (305)
-.+.|.|.+++ |-+.+-+ .++|+..++|+..|++.-
T Consensus 10 l~~al~qMl~M--GF~negGWLt~LL~~k~gDI~~aLD~l 47 (52)
T 1q02_A 10 LIESLSQMLSM--GFSDEGGWLTRLLQTKNYDIGAALDTI 47 (52)
T ss_dssp HHHHHHHHHTT--TCCCTTSHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHHHc--CCCccccHHHHHHHHccCCHHHHHHHh
Confidence 34567788777 5555555 699999999999999875
No 372
>4dbg_B Ring finger protein 31; ubiquitin fold, ubiquitination, ligase; 2.71A {Homo sapiens}
Probab=31.87 E-value=37 Score=28.55 Aligned_cols=36 Identities=6% Similarity=0.084 Sum_probs=21.3
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHH
Q 021955 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILL 44 (305)
Q Consensus 8 ~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ 44 (305)
...++...++. +--+.+.+...|..+++|++.|+.+
T Consensus 102 R~~K~~eL~s~-G~~~~~~~~~aL~~~~Gdv~~Al~e 137 (162)
T 4dbg_B 102 RRRKVQELQSL-GFGPEEGSLQALFQHGGDVSRALTE 137 (162)
T ss_dssp HHHHHHHHHHT-TCCGGGTHHHHHHHTTTCHHHHHHH
T ss_pred HHHHHHHHHhc-CCchHHHHHHHHHHcCCcHHHHHHH
Confidence 34455555555 5556666666666666666666554
No 373
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=31.77 E-value=40 Score=26.46 Aligned_cols=117 Identities=18% Similarity=0.089 Sum_probs=68.0
Q ss_pred CCCccccccccHHHHHHHHHHcC-CeEEEEeecCCCc----cchhhh-----hccCCCHHHHHHhhc--cEEEEEecCCC
Q 021955 114 RPPFHVMFNGSFEKAKDAALAQD-KWLLVNLQSTKEF----SSLMLN-----RDTWGNEAVSQIISV--NFIFWQEYDDT 181 (305)
Q Consensus 114 rPP~~l~~~gsf~~A~~~Ak~~~-KwLLVniq~~~~f----~c~~ln-----RDvw~n~~V~~~i~~--nFIfwq~~~ds 181 (305)
.+|+-+-...+..+|+..-.+.+ ..+.|. .....+ .-.-+- ...+.+..|.+++.. +++....+..-
T Consensus 24 ~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vv-d~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l 102 (159)
T 3fv6_A 24 SIPVVIHENVSVYDAICTMFLEDVGTLFVV-DRDAVLVGVLSRKDLLRASIGQQELTSVPVHIIMTRMPNITVCRREDYV 102 (159)
T ss_dssp BCCCEEETTSBHHHHHHHHHHHTCSEEEEE-CTTSCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSEETTSCCCBCTTSBH
T ss_pred CCCEEECCCCcHHHHHHHHHHCCCCEEEEE-cCCCcEEEEEeHHHHHHHhhccCcccCcCHHHHHcCCCCcEEECCCCCH
Confidence 45554455678999988766544 444443 322222 111221 223455567777776 66655443333
Q ss_pred hhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCCCC
Q 021955 182 SEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSPRK 236 (305)
Q Consensus 182 ~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~~~~ 236 (305)
.+..++...++ +.++.|+|. .|.. ....|.++..+++..+.++....+..
T Consensus 103 ~~a~~~m~~~~---~~~lpVvd~-~g~~-~~~vGiit~~dil~~l~~~~~~~~~~ 152 (159)
T 3fv6_A 103 MDIAKHLIEKQ---IDALPVIKD-TDKG-FEVIGRVTKTNMTKILVSLSENEILL 152 (159)
T ss_dssp HHHHHHHHHHT---CSEEEEEEE-CSSS-EEEEEEEEHHHHHHHHHHHHTTCCC-
T ss_pred HHHHHHHHHcC---CcEEEEEeC-CCcc-eeEEEEEEHHHHHHHHHHHhhcchhh
Confidence 46666665554 667888885 3410 01347788999999999998876654
No 374
>3ihp_A Ubiquitin carboxyl-terminal hydrolase 5; hydrolase, protease, thiol protease, UBL conjugation pathway, metal-binding, zinc-finger,structural genomics; 2.80A {Homo sapiens}
Probab=31.33 E-value=46 Score=34.85 Aligned_cols=41 Identities=24% Similarity=0.340 Sum_probs=36.0
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021955 7 DKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (305)
Q Consensus 7 ~~~~~i~~F~~iTtg~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 49 (305)
...+.|.+..++ |-+.+.|++-|..+++|++.||+..|++.
T Consensus 719 ~~~e~i~~l~~m--Gf~~~~a~~aL~~t~~~~eraidwlfs~~ 759 (854)
T 3ihp_A 719 PPEDCVTTIVSM--GFSRDQALKALRATNNSLERAVDWIFSHI 759 (854)
T ss_dssp CCHHHHHHHHTT--TCCHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHc--CCCHHHHHHHHHhhcCcHHHHHHhhhcCc
Confidence 356778888777 89999999999999999999999999864
No 375
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=31.25 E-value=83 Score=22.96 Aligned_cols=100 Identities=9% Similarity=0.056 Sum_probs=57.8
Q ss_pred cccccccHHHHHHHHHHcC-CeEE-EEeecC--CCccchhhh----hc-cCCCHHHHHHhhccEEEEEecCCChhHHHHH
Q 021955 118 HVMFNGSFEKAKDAALAQD-KWLL-VNLQST--KEFSSLMLN----RD-TWGNEAVSQIISVNFIFWQEYDDTSEGWKVC 188 (305)
Q Consensus 118 ~l~~~gsf~~A~~~Ak~~~-KwLL-Vniq~~--~~f~c~~ln----RD-vw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~ 188 (305)
-+-...+..+|+..-.+.+ .++. |+ .+. +...-.-+- .. -+.+..|.+++..+++....+..-.+..+..
T Consensus 13 ~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~ 91 (125)
T 1pbj_A 13 TIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDLVTISPRATIKEAAEKM 91 (125)
T ss_dssp EEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGGGEECTTSCHHHHHHHH
T ss_pred EECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCCeEECCCCCHHHHHHHH
Confidence 3344667999887776544 3443 33 221 001111111 11 1246678899888877776655556777766
Q ss_pred HhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHH
Q 021955 189 SFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLL 227 (305)
Q Consensus 189 ~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~ 227 (305)
..++ +.++.|+|. |+ +.|.++..+++..|.
T Consensus 92 ~~~~---~~~l~Vvd~--~~----~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 92 VKNV---VWRLLVEED--DE----IIGVISATDILRAKM 121 (125)
T ss_dssp HHHT---CSEEEEEET--TE----EEEEEEHHHHHHHHC
T ss_pred HhcC---CcEEEEEEC--CE----EEEEEEHHHHHHHHH
Confidence 6664 566778885 65 346677888776653
No 376
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=30.88 E-value=34 Score=25.84 Aligned_cols=105 Identities=16% Similarity=0.083 Sum_probs=62.1
Q ss_pred CccccccccHHHHHHHHHHcC-CeEEEEeecCCCc----cchhh-----hhccCCCHHHHHHhhccEEEEEecCCChhHH
Q 021955 116 PFHVMFNGSFEKAKDAALAQD-KWLLVNLQSTKEF----SSLML-----NRDTWGNEAVSQIISVNFIFWQEYDDTSEGW 185 (305)
Q Consensus 116 P~~l~~~gsf~~A~~~Ak~~~-KwLLVniq~~~~f----~c~~l-----nRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~ 185 (305)
+.-+--..+..+|+..-.+.+ .++.|. .+...+ .-.-+ .+..+.+..|.+++..+++....+..-.+..
T Consensus 17 ~~~v~~~~~~~~a~~~~~~~~~~~~~Vv-d~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~ 95 (138)
T 2yzi_A 17 LLGVKPSTSVQEASRLMMEFDVGSLVVI-NDDGNVVGFFTKSDIIRRVIVPGLPYDIPVERIMTRNLITANVNTPLGEVL 95 (138)
T ss_dssp CCEECTTSBHHHHHHHHHHHTCSEEEEE-CTTSCEEEEEEHHHHHHHTTTTCCCTTSBGGGTCBCSCCEEETTSBHHHHH
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEE-cCCCcEEEEEeHHHHHHHHHhcCCcccCCHHHHhhCCCeEECCCCcHHHHH
Confidence 333344667888887766544 444443 222222 22222 2223456678888888887776655555666
Q ss_pred HHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021955 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFM 230 (305)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl 230 (305)
++...+ .++++ |+|. .|+ ..|.++..+++..+...+
T Consensus 96 ~~m~~~---~~~~l-Vvd~-~g~----~~Giit~~dil~~~~~~~ 131 (138)
T 2yzi_A 96 RKMAEH---RIKHI-LIEE-EGK----IVGIFTLSDLLEASRRRL 131 (138)
T ss_dssp HHHHHH---TCSEE-EEEE-TTE----EEEEEEHHHHHHHHHCCS
T ss_pred HHHHhc---CCCEE-EECC-CCC----EEEEEEHHHHHHHHHHHH
Confidence 666655 46788 9985 465 446678888887765433
No 377
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=30.71 E-value=2.5e+02 Score=23.82 Aligned_cols=92 Identities=10% Similarity=0.110 Sum_probs=54.2
Q ss_pred HHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeC
Q 021955 125 FEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDP 204 (305)
Q Consensus 125 f~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdp 204 (305)
-+++...-+....|++.++.+.....+..+ ..+.+-++.++.|+... ...++..|++.. |.|++.-|
T Consensus 14 ~~~~~~~l~~~~v~vvgff~~~~~~~~~~f-------~~~A~~lr~~~~F~~~~-----~~~v~~~~~~~~-p~i~~fk~ 80 (252)
T 2h8l_A 14 EEEFKKFISDKDASIVGFFDDSFSEAHSEF-------LKAASNLRDNYRFAHTN-----VESLVNEYDDNG-EGIILFRP 80 (252)
T ss_dssp HHHHHHHHTSSSCEEEEEESCTTSHHHHHH-------HHHHHHTTTTSCEEEEC-----CHHHHHHHCSSS-EEEEEECC
T ss_pred HHHHHHHhhcCCeEEEEEECCCCChHHHHH-------HHHHHhcccCcEEEEEC-----hHHHHHHhCCCC-CcEEEEcc
Confidence 344444334456677777766322233333 24566677788888763 244888999886 99888876
Q ss_pred CC-----CeeEEEe-cCCCChHHHHHHHHHHHhhC
Q 021955 205 IT-----GQKICSW-CGMINPQPLGEMLLPFMDRS 233 (305)
Q Consensus 205 rT-----Ge~~~~~-~G~~~~~~~l~~L~~fl~~~ 233 (305)
.. .+....+ .|..+.++ |..|+..+
T Consensus 81 ~~~~~kf~e~~~~y~~g~~~~~~----l~~fi~~~ 111 (252)
T 2h8l_A 81 SHLTNKFEDKTVAYTEQKMTSGK----IKKFIQEN 111 (252)
T ss_dssp GGGCCTTSCSEEECCCSSCCHHH----HHHHHHHH
T ss_pred hhhcccccccccccCCCCcCHHH----HHHHHHhc
Confidence 21 1233456 77666665 55566543
No 378
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=28.98 E-value=38 Score=27.94 Aligned_cols=46 Identities=7% Similarity=-0.026 Sum_probs=30.0
Q ss_pred CeEEEEeecCCCccchhhhhccCCCHHHHHHhhc--cEEEEEecCCCh
Q 021955 137 KWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTS 182 (305)
Q Consensus 137 KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~--nFIfwq~~~ds~ 182 (305)
+..+|.+.+.||..|..|...+=..+.+++.+.. +|++..+....+
T Consensus 15 ~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 62 (189)
T 3l9v_A 15 APAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVSLLGP 62 (189)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECSSSST
T ss_pred CCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEechhccc
Confidence 6778999999999999997654011445443333 466666655333
No 379
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=28.90 E-value=62 Score=27.13 Aligned_cols=102 Identities=9% Similarity=0.058 Sum_probs=62.8
Q ss_pred cccHHHHHHHHHHcC--CeEEEEeec-CCCccchhhhhccC---CCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCC
Q 021955 122 NGSFEKAKDAALAQD--KWLLVNLQS-TKEFSSLMLNRDTW---GNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDS 195 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~--KwLLVniq~-~~~f~c~~lnRDvw---~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~ 195 (305)
..+..+|+..-++.. +.-.+++.+ .+.+---.--||++ .+..|.+++..++++...+.+-.+..++...|+
T Consensus 70 ~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~--- 146 (205)
T 3kxr_A 70 KATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKHEPHEPLISLLSEDSRALTANTTLLDAAEAIEHSR--- 146 (205)
T ss_dssp TCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTSCTTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSS---
T ss_pred CCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhCCCcchHHHHhcCCCeEECCCCCHHHHHHHHHhcC---
Confidence 567888888777630 222222233 22222222233443 244688888888888877666677777777775
Q ss_pred CceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 196 IPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 196 ~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
+.++.|||. .|+. .|.++.+++++.+.+-..
T Consensus 147 ~~~lpVVD~-~g~l----vGiIT~~Dil~~i~~e~~ 177 (205)
T 3kxr_A 147 EIELPVIDD-AGEL----IGRVTLRAATALVREHYE 177 (205)
T ss_dssp CSEEEEECT-TSBE----EEEEEHHHHHHHHHHHHC
T ss_pred CCEEEEEcC-CCeE----EEEEEHHHHHHHHHHHHH
Confidence 456778885 4664 466888999888876544
No 380
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=27.72 E-value=1.3e+02 Score=25.39 Aligned_cols=67 Identities=10% Similarity=-0.009 Sum_probs=40.2
Q ss_pred ccHHHHHHHHHHc---CCeEEEEeecCCCccchhhhhccCCCHHHHHHhhc---cEEEEEecCCChhHHHHHHhcCCCCC
Q 021955 123 GSFEKAKDAALAQ---DKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEGWKVCSFYNMDSI 196 (305)
Q Consensus 123 gsf~~A~~~Ak~~---~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~---nFIfwq~~~ds~eg~~~~~~Y~~~~~ 196 (305)
.+.+++++.-+.. ..-|.|| ..++|..|++. +.++++ .|...-++.+ ++...+...|.....
T Consensus 153 ~~~~~il~~l~~~~i~~~~i~ly-~~~~Cp~C~~a----------~~~L~~~~i~~~~~~i~~~-~~~~~l~~~~g~~~v 220 (241)
T 1nm3_A 153 SDADTMLKYLAPQHQVQESISIF-TKPGCPFCAKA----------KQLLHDKGLSFEEIILGHD-ATIVSVRAVSGRTTV 220 (241)
T ss_dssp SSHHHHHHHHCTTSCCCCCEEEE-ECSSCHHHHHH----------HHHHHHHTCCCEEEETTTT-CCHHHHHHHTCCSSS
T ss_pred cCHHHHHHHhhhhccccceEEEE-ECCCChHHHHH----------HHHHHHcCCceEEEECCCc-hHHHHHHHHhCCCCc
Confidence 3455555444332 2334454 45699999866 344444 3555544433 455678888888999
Q ss_pred ceEEE
Q 021955 197 PAVLV 201 (305)
Q Consensus 197 P~i~I 201 (305)
|.|.|
T Consensus 221 P~~~~ 225 (241)
T 1nm3_A 221 PQVFI 225 (241)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 99853
No 381
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=27.37 E-value=1.3e+02 Score=27.20 Aligned_cols=81 Identities=10% Similarity=0.095 Sum_probs=46.2
Q ss_pred EEEEeecCCCccchhhhhccCCCHHHHHH-hhccEEE--EEec-CC-------------ChhHHHHHHhcCCCCC--ceE
Q 021955 139 LLVNLQSTKEFSSLMLNRDTWGNEAVSQI-ISVNFIF--WQEY-DD-------------TSEGWKVCSFYNMDSI--PAV 199 (305)
Q Consensus 139 LLVniq~~~~f~c~~lnRDvw~n~~V~~~-i~~nFIf--wq~~-~d-------------s~eg~~~~~~Y~~~~~--P~i 199 (305)
.+.-+.+++|..|..-.+-+ .+. .+.++|- |.++ .+ ..+...+.+.|...+. |.|
T Consensus 45 ~VelyTs~gCp~C~~Ak~lL------~~~~~~~~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVyTPqI 118 (270)
T 2axo_A 45 VVELFTSQGCASCPPADEAL------RKMIQKGDVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQA 118 (270)
T ss_dssp EEEEEECTTCTTCHHHHHHH------HHHHHHTSSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCCSSEE
T ss_pred EEEEEeCCCCCChHHHHHHH------HHhhccCCeeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCcccCCEE
Confidence 44445567999998664322 111 1124442 3322 22 2345568889998888 997
Q ss_pred EEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021955 200 LVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (305)
Q Consensus 200 ~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~ 232 (305)
+| | |+.. ..| .+++.+.+.|.+....
T Consensus 119 ~I-n---g~~~--v~G-~d~~~l~~~l~~~~~~ 144 (270)
T 2axo_A 119 IL-N---GRDH--VKG-ADVRGIYDRLDAFKRE 144 (270)
T ss_dssp EE-T---TTEE--EET-TCHHHHHHHHHHHHHT
T ss_pred EE-C---CEEe--ecC-CCHHHHHHHHHHhhcc
Confidence 75 4 4421 234 3678887777766544
No 382
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=26.98 E-value=1.1e+02 Score=23.60 Aligned_cols=101 Identities=17% Similarity=0.175 Sum_probs=61.5
Q ss_pred ccccccccHHHHHHHHHHc-CCeEEEEeecCCCc----cchhhhhcc------CCCHHHHHHhhccEEEEEecCCChhHH
Q 021955 117 FHVMFNGSFEKAKDAALAQ-DKWLLVNLQSTKEF----SSLMLNRDT------WGNEAVSQIISVNFIFWQEYDDTSEGW 185 (305)
Q Consensus 117 ~~l~~~gsf~~A~~~Ak~~-~KwLLVniq~~~~f----~c~~lnRDv------w~n~~V~~~i~~nFIfwq~~~ds~eg~ 185 (305)
.-+-...+..+|+..-++. ...+.| .. ...+ .-.-+-|-+ +.+..|.+++..+++....+..-.+..
T Consensus 24 ~~v~~~~~~~~a~~~~~~~~~~~~~V-~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~ 101 (157)
T 4fry_A 24 YTVTKNDFVYDAIKLMAEKGIGALLV-VD-GDDIAGIVTERDYARKVVLQERSSKATRVEEIMTAKVRYVEPSQSTDECM 101 (157)
T ss_dssp CEEETTSBHHHHHHHHHHHTCSEEEE-ES-SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHHSBSSCCCBCTTSBHHHHH
T ss_pred eEECCCCcHHHHHHHHHHcCCCEEEE-ee-CCEEEEEEEHHHHHHHHHhccCCccccCHHHHcCCCCcEECCCCcHHHHH
Confidence 3344467899998876544 466666 33 2222 111221211 346779999988877665554445777
Q ss_pred HHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021955 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLP 228 (305)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~ 228 (305)
++...++ +.++.|+| .|+. .|.++..+++..+..
T Consensus 102 ~~m~~~~---~~~lpVvd--~g~~----~Giit~~dil~~l~~ 135 (157)
T 4fry_A 102 ALMTEHR---MRHLPVLD--GGKL----IGLISIGDLVKSVIA 135 (157)
T ss_dssp HHHHHHT---CSEEEEEE--TTEE----EEEEEHHHHHHHHHT
T ss_pred HHHHHcC---CCEEEEEE--CCEE----EEEEEHHHHHHHHHH
Confidence 7666665 45677888 4764 466788887777654
No 383
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=25.63 E-value=51 Score=28.31 Aligned_cols=72 Identities=8% Similarity=-0.015 Sum_probs=53.0
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEE
Q 021955 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVI 202 (305)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~II 202 (305)
+++.+.....|+.+|.++|++-. +.-|. .++.-.+|| +.+=...+=-....+-+.++.+++...|.+.+|
T Consensus 43 ~~L~~iv~~ik~~gK~vivh~Dl-----I~GLs----~d~~ai~fL-~~~~pdGIIsTk~~~i~~Akk~GL~tIqR~Fli 112 (188)
T 1vkf_A 43 LNLKFHLKILKDRGKTVFVDMDF-----VNGLG----EGEEAILFV-KKAGADGIITIKPKNYVVAKKNGIPAVLRFFAL 112 (188)
T ss_dssp TTHHHHHHHHHHTTCEEEEEGGG-----EETCC----SSHHHHHHH-HHHTCSEEEESCHHHHHHHHHTTCCEEEEEECC
T ss_pred HHHHHHHHHHHHCCCeEEEecCc-----ccccC----CCHHHHHHH-HhcCCCEEEcCcHHHHHHHHHcCCEEeeEEEEE
Confidence 34889999999999999999765 33443 467888888 332222222345788899999999999999999
Q ss_pred eC
Q 021955 203 DP 204 (305)
Q Consensus 203 dp 204 (305)
|.
T Consensus 113 Ds 114 (188)
T 1vkf_A 113 DS 114 (188)
T ss_dssp SH
T ss_pred Ee
Confidence 94
No 384
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=25.35 E-value=65 Score=24.03 Aligned_cols=103 Identities=10% Similarity=0.179 Sum_probs=57.7
Q ss_pred ccccccHHHHHHHHHHcC-CeEEEEeecCCCc----cch----hhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHH
Q 021955 119 VMFNGSFEKAKDAALAQD-KWLLVNLQSTKEF----SSL----MLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCS 189 (305)
Q Consensus 119 l~~~gsf~~A~~~Ak~~~-KwLLVniq~~~~f----~c~----~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~ 189 (305)
+-...+..+|+..-.+.+ .++.|. .+ ..+ .-. .+....+.+..|.+++..+++....+..-.+..+...
T Consensus 17 v~~~~~~~~a~~~~~~~~~~~~~Vv-d~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~ 94 (133)
T 2ef7_A 17 VTKDAKLNDIAKVMTEKNIGSVIVV-DG-NKPVGIITERDIVKAIGKGKSLETKAEEFMTASLITIREDSPITGALALMR 94 (133)
T ss_dssp EETTCBHHHHHHHHHHHTCSEEEEE-ET-TEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEECCCCEETTSBHHHHHHHHH
T ss_pred ECCCCcHHHHHHHHHhcCCCEEEEE-EC-CEEEEEEcHHHHHHHHhcCCCcccCHHHHcCCCCEEECCCCCHHHHHHHHH
Confidence 334667888888765543 444432 22 211 111 1111223345566777666665554444456666555
Q ss_pred hcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 190 FYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 190 ~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
.. .++++.|+|. .|+ ..|.++..+++..+.+.++
T Consensus 95 ~~---~~~~l~Vvd~-~g~----~~Giit~~dll~~~~~~~~ 128 (133)
T 2ef7_A 95 QF---NIRHLPVVDD-KGN----LKGIISIRDITRAIDDMFE 128 (133)
T ss_dssp HH---TCSEEEEECT-TSC----EEEEEEHHHHHHHHHHHC-
T ss_pred Hc---CCCEEEEECC-CCe----EEEEEEHHHHHHHHHHHHH
Confidence 55 4677888884 465 4467888888888776654
No 385
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=24.43 E-value=1.7e+02 Score=23.81 Aligned_cols=42 Identities=12% Similarity=0.156 Sum_probs=25.0
Q ss_pred HHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCCh------HHHHHHHHHHH
Q 021955 185 WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINP------QPLGEMLLPFM 230 (305)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~------~~~l~~L~~fl 230 (305)
.+.++.+++...|+++| .|+.+..-.|.-+. +.+++.+...+
T Consensus 135 ~~~a~~~gv~GtPt~~v----ng~~~v~~~~~~~~~~~~~~~~~~~~i~~Li 182 (189)
T 3l9v_A 135 ERLFKEYGVRGTPSVYV----RGRYHINNAAFGAFSVENFRSRYAAVVRKLL 182 (189)
T ss_dssp HHHHHHTTCCSSSEEEE----TTTEEECGGGCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCccCEEEE----CCEEEECccccccccccchHHHHHHHHHHHH
Confidence 45667889999999996 36654332232233 55555444444
No 386
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=24.28 E-value=93 Score=24.51 Aligned_cols=29 Identities=24% Similarity=0.179 Sum_probs=22.2
Q ss_pred CceEEEEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021955 196 IPAVLVIDPITGQKICSWCGMINPQPLGEMLLP 228 (305)
Q Consensus 196 ~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~ 228 (305)
-..|-|||..||+.+.. +.|+++++.+..
T Consensus 68 ~~vVkVvD~~TgEVIRq----IPpEe~L~l~~~ 96 (117)
T 2hc5_A 68 EYYVKVIEDSTNEVIRE----IPPKRWLDFYAA 96 (117)
T ss_dssp EEEEEEEETTTTEEEEE----ECHHHHHHHHHH
T ss_pred cEEEEEEECCCCcEEEe----CChHHHHHHHHH
Confidence 47888999999999988 457777664433
No 387
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=23.59 E-value=94 Score=24.51 Aligned_cols=63 Identities=10% Similarity=0.129 Sum_probs=41.7
Q ss_pred CCHHHHHHhhccEEEEEecCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 160 GNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 160 ~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
.+..|.+++..+++....+..-.+..+....++ ++++.|+| .|+ ..|.++..+++..+.....
T Consensus 106 ~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~---~~~l~Vvd--~g~----~vGiit~~dll~~l~~~~~ 168 (185)
T 2j9l_A 106 PTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLG---LRQCLVTH--NGR----LLGIITKKDVLKHIAQMAN 168 (185)
T ss_dssp CCEECGGGEESSCCEEETTSBHHHHHHHHHHHT---CSEEEEEE--TTE----EEEEEEHHHHHHHHHHHCC
T ss_pred cCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCC---CcEEEEEE--CCE----EEEEEEHHHHHHHHHHhhc
Confidence 445577777777766655444456666665554 56777888 566 3467888888888776544
No 388
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=23.49 E-value=79 Score=23.51 Aligned_cols=102 Identities=11% Similarity=0.060 Sum_probs=59.9
Q ss_pred CCccccccccHHHHHHHHHHcC-CeEEEEeecCCCc----cchhhh-----hccC-CCHHHHHHhhccEEEEEecCCChh
Q 021955 115 PPFHVMFNGSFEKAKDAALAQD-KWLLVNLQSTKEF----SSLMLN-----RDTW-GNEAVSQIISVNFIFWQEYDDTSE 183 (305)
Q Consensus 115 PP~~l~~~gsf~~A~~~Ak~~~-KwLLVniq~~~~f----~c~~ln-----RDvw-~n~~V~~~i~~nFIfwq~~~ds~e 183 (305)
++.-+-...+..+|+..-.+.+ .++.|. .+...+ .-.-+- +..+ .+..|.+++..+++....+..-.+
T Consensus 17 ~~~~v~~~~~~~~a~~~~~~~~~~~~~Vv-d~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~ 95 (133)
T 1y5h_A 17 GVTCVGEHETLTAAAQYMREHDIGALPIC-GDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARDSIYYVDANASIQE 95 (133)
T ss_dssp TCCCEETTSBHHHHHHHHHHHTCSEEEEE-CGGGBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHTTCCCCEETTCCHHH
T ss_pred CceEeCCCCCHHHHHHHHHHhCCCeEEEE-CCCCeEEEEEeHHHHHHHHHhcCCCccccCHHHHhcCCCEEECCCCCHHH
Confidence 3333444668999987766543 455443 221211 122222 1222 456799999888877766655567
Q ss_pred HHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHH
Q 021955 184 GWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEML 226 (305)
Q Consensus 184 g~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L 226 (305)
..++...++ +.++.|+|. |+ +.|.++..+++..+
T Consensus 96 ~~~~m~~~~---~~~l~Vvd~--g~----~~Giit~~dil~~l 129 (133)
T 1y5h_A 96 MLNVMEEHQ---VRRVPVISE--HR----LVGIVTEADIARHL 129 (133)
T ss_dssp HHHHHHHHT---CSEEEEEET--TE----EEEEEEHHHHHHTC
T ss_pred HHHHHHHcC---CCEEEEEEC--CE----EEEEEEHHHHHHHH
Confidence 777776664 567778885 65 34667777766543
No 389
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=23.46 E-value=69 Score=26.51 Aligned_cols=38 Identities=8% Similarity=-0.051 Sum_probs=30.1
Q ss_pred HHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHH
Q 021955 185 WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEML 226 (305)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L 226 (305)
.++++.+.+...|+++| .|+.+....|..++++|.+.|
T Consensus 144 ~~~a~~~GV~gtPtf~i----ng~~~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 144 TKYARQNGIHVSPTFMI----NGLVQPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp HHHHHHHTCCSSSEEEE----TTEECTTCCTTSCHHHHHHHH
T ss_pred HHHHHHCCCCccCEEEE----CCEEccCCCCCCCHHHHHHHh
Confidence 36777889999999986 477665567888999998876
No 390
>2bkf_A Zinc-finger protein NBR1 (NEXT to breast cancer 1; PB1 domain, interaction domain, Z finger; 1.56A {Homo sapiens} SCOP: d.15.2.2 PDB: 2g4s_A
Probab=23.17 E-value=56 Score=24.66 Aligned_cols=31 Identities=19% Similarity=0.293 Sum_probs=25.8
Q ss_pred CCccccccccHHHHHHHHHHcCCeEEEEeec
Q 021955 115 PPFHVMFNGSFEKAKDAALAQDKWLLVNLQS 145 (305)
Q Consensus 115 PP~~l~~~gsf~~A~~~Ak~~~KwLLVniq~ 145 (305)
-+.-|..++.|++|++.|.+++.-|-++++.
T Consensus 56 D~v~i~Sq~E~eEAlkva~k~~n~L~m~v~~ 86 (87)
T 2bkf_A 56 EEVSINSQGEYEEALKMAVKQGNQLQMQVHE 86 (87)
T ss_dssp CEEEECSHHHHHHHHHHHHHTTTEEEEEEEE
T ss_pred CEEEEecHHHHHHHHHHhccCCCEEEEEEec
Confidence 3345667889999999999999999988864
No 391
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=22.69 E-value=2.6e+02 Score=21.45 Aligned_cols=101 Identities=12% Similarity=0.128 Sum_probs=57.9
Q ss_pred CCCccccccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEecCCChhHHHHHHhcCC
Q 021955 114 RPPFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNM 193 (305)
Q Consensus 114 rPP~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~ 193 (305)
+|+-...--.+.+++... .+.++.++|-+-..+|.+|... =..+.+-+ ..|-|...+. ..++..|.+
T Consensus 18 gP~~~~~~i~s~~e~e~f-i~~~~v~VVGfF~~~~~~~~~~------F~~~A~~~-~d~~F~~t~~-----~~v~~~~~v 84 (124)
T 2l4c_A 18 GAAQEPTWLTDVPAAMEF-IAATEVAVIGFFQDLEIPAVPI------LHSMVQKF-PGVSFGISTD-----SEVLTHYNI 84 (124)
T ss_dssp CCSCCCEECCSHHHHHHH-HHTSSEEEEEECSCTTSTHHHH------HHHHHHHC-TTSEEEEECC-----HHHHHHTTC
T ss_pred CCCCcceEcCCHHHHHHH-HhcCCCEEEEEECCCCChhHHH------HHHHHHhC-CCceEEEECh-----HHHHHHcCC
Confidence 455433222344443333 3456667776666677777221 12334444 6677776532 448889998
Q ss_pred CCCceEEEEeCCCCeeEEEecC----CCChHHHHHHHHHHHhhC
Q 021955 194 DSIPAVLVIDPITGQKICSWCG----MINPQPLGEMLLPFMDRS 233 (305)
Q Consensus 194 ~~~P~i~IIdprTGe~~~~~~G----~~~~~~~l~~L~~fl~~~ 233 (305)
. .|.|.+.-+-. +....+.| ..+.+. |..|+..+
T Consensus 85 ~-~~~vvlfkkfd-e~~~~~~g~~~~~~~~~~----L~~FI~~n 122 (124)
T 2l4c_A 85 T-GNTICLFRLVD-NEQLNLEDEDIESIDATK----LSRFIEIN 122 (124)
T ss_dssp C-SSCEEEEETTT-TEEEEECHHHHTTCCHHH----HHHHHHHH
T ss_pred C-CCeEEEEEcCC-CCceeecCcccCCCCHHH----HHHHHHHh
Confidence 7 89999887632 34445665 456665 66666543
No 392
>1wj6_A KIAA0049 protein, RSGI RUH-024; PB1 domain, protein binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=22.68 E-value=61 Score=25.11 Aligned_cols=31 Identities=19% Similarity=0.287 Sum_probs=26.4
Q ss_pred CccccccccHHHHHHHHHHcCCeEEEEeecC
Q 021955 116 PFHVMFNGSFEKAKDAALAQDKWLLVNLQST 146 (305)
Q Consensus 116 P~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~ 146 (305)
+.-|..++.|++|++.|.+++.-|-++++..
T Consensus 65 ~V~i~Sq~E~eEAlkva~k~~n~L~m~V~~~ 95 (101)
T 1wj6_A 65 EVSINSQGEYEEALKMAVKQGNQLQMQVHEG 95 (101)
T ss_dssp EECCCSHHHHHHHHHHHHHHTSEEEEECCBC
T ss_pred EEEEecHHHHHHHHHHhccCCCEEEEEEeec
Confidence 3456678889999999999999999999873
No 393
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=22.25 E-value=27 Score=27.25 Aligned_cols=106 Identities=10% Similarity=0.035 Sum_probs=56.5
Q ss_pred ccccccHHHHHHHHHHcCCeEEEEeecCCCccchhhhhcc-------------CCCHHHHHHhhccEEEEEecCCChhHH
Q 021955 119 VMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDT-------------WGNEAVSQIISVNFIFWQEYDDTSEGW 185 (305)
Q Consensus 119 l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDv-------------w~n~~V~~~i~~nFIfwq~~~ds~eg~ 185 (305)
+-...+..+|+..-.+.+---++-+.....+---.--+|+ |.+..|.+++..+++....+..-.+..
T Consensus 30 v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~ 109 (156)
T 3ctu_A 30 LIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTKTDVAVVSPDFTITEVL 109 (156)
T ss_dssp EETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGGCBCSCCCBCSSCCHHHHH
T ss_pred ECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHHhccCCceeeCCCCcHHHHH
Confidence 3345678888877665542222222222222111111111 224556777766666554443334555
Q ss_pred HHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021955 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (305)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~~ 234 (305)
++...+ .++.|+|. .|+. .|.++..+++..+...+.+..
T Consensus 110 ~~~~~~-----~~lpVvd~-~g~~----~Giit~~dil~~l~~~~~~~~ 148 (156)
T 3ctu_A 110 HKLVDE-----SFLPVVDA-EGIF----QGIITRKSILKAVNALLHDFS 148 (156)
T ss_dssp HHTTTS-----SEEEEECT-TSBE----EEEEETTHHHHHHHHHSCC--
T ss_pred HHHHHc-----CeEEEEcC-CCeE----EEEEEHHHHHHHHHHHHHhhc
Confidence 544433 36888884 4664 466788899998888776544
No 394
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=21.83 E-value=2e+02 Score=21.31 Aligned_cols=104 Identities=8% Similarity=0.002 Sum_probs=55.0
Q ss_pred CCccccccccHHHHHHHHHHcCC-eEEEEeecCCCc----cchhhhh----c--cCCCHHHHHHhhc------cEEEEEe
Q 021955 115 PPFHVMFNGSFEKAKDAALAQDK-WLLVNLQSTKEF----SSLMLNR----D--TWGNEAVSQIISV------NFIFWQE 177 (305)
Q Consensus 115 PP~~l~~~gsf~~A~~~Ak~~~K-wLLVniq~~~~f----~c~~lnR----D--vw~n~~V~~~i~~------nFIfwq~ 177 (305)
++.-+-...+..+|+..-.+.+- .+.| +.+...+ .-.-+-+ . .+.+..|.+++.. .++....
T Consensus 20 ~~~~v~~~~~~~~a~~~~~~~~~~~~~V-vd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~ 98 (144)
T 2nyc_A 20 NMKSCQMTTPVIDVIQMLTQGRVSSVPI-IDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEALMRRSDDFEGVYTCTK 98 (144)
T ss_dssp SCCCBCTTSBHHHHHHHHHHHTCSEEEE-ECTTCBEEEEEEHHHHHHHHHTC----CCSBHHHHHHHCC------CEECT
T ss_pred CceEECCCCcHHHHHHHHHHcCcceeeE-EcCCCcEEEEEcHHHHHHHhcccccccCCccHHHHHhcCccccCCCeEECC
Confidence 33333445678888877665443 3333 2222222 1111111 1 1335578888875 4555544
Q ss_pred cCCChhHHHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHH
Q 021955 178 YDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLL 227 (305)
Q Consensus 178 ~~ds~eg~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~ 227 (305)
+..-.+..+.....+ +.++.|+|. .|+. .|.++..+++..|.
T Consensus 99 ~~~l~~~~~~m~~~~---~~~l~Vvd~-~g~~----~Giit~~dil~~l~ 140 (144)
T 2nyc_A 99 NDKLSTIMDNIRKAR---VHRFFVVDD-VGRL----VGVLTLSDILKYIL 140 (144)
T ss_dssp TSBHHHHHHHHHHHT---CSEEEEECT-TSBE----EEEEEHHHHHHHHH
T ss_pred CCcHHHHHHHHHHCC---CCEEEEECC-CCCE----EEEEEHHHHHHHHH
Confidence 444456666665554 566778884 4664 46678888877664
No 395
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=21.35 E-value=1.7e+02 Score=25.05 Aligned_cols=42 Identities=10% Similarity=0.129 Sum_probs=32.6
Q ss_pred HHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021955 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (305)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~~~ 233 (305)
+.+..+.+...|+++| + |+. .+.|..+++.|.+.|.+.+.+.
T Consensus 174 ~~a~~~Gv~GvPtfvv-~---g~~--~v~Ga~~~e~~~~~i~~~~~~~ 215 (239)
T 3gl5_A 174 REAAQLGATGVPFFVL-D---RAY--GVSGAQPAEVFTQALTQAWGER 215 (239)
T ss_dssp HHHHHTTCCSSSEEEE-T---TTE--EEESSCCHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCeeCeEEE-C---CcE--eecCCCCHHHHHHHHHHHHhhc
Confidence 4556788999999986 3 542 2478899999999999998864
No 396
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=21.35 E-value=85 Score=25.27 Aligned_cols=58 Identities=14% Similarity=-0.028 Sum_probs=35.9
Q ss_pred HHHHHHhhcc-----EEEEEecCCChhHHHHHHhcCCCC-----------CceEEEEeCCCCeeEEEecCC-------CC
Q 021955 162 EAVSQIISVN-----FIFWQEYDDTSEGWKVCSFYNMDS-----------IPAVLVIDPITGQKICSWCGM-------IN 218 (305)
Q Consensus 162 ~~V~~~i~~n-----FIfwq~~~ds~eg~~~~~~Y~~~~-----------~P~i~IIdprTGe~~~~~~G~-------~~ 218 (305)
+.+++|++++ |-++ .| ...++++.|.+.. .|+..|| + .|+.+..+.+. ..
T Consensus 79 ~~~~~~~~~~~~~~~fp~l---~D--~~~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~-~G~I~~~~~~~~~~~~~~~~ 151 (167)
T 2wfc_A 79 FVMDAWGKAHGADDKVQML---AD--PGGAFTKAVDMELDLSAVLGNVRSKRYSLVI-E-DGVVTKVNVEPDGKGLTCSL 151 (167)
T ss_dssp HHHHHHHHHTTCTTTSEEE---EC--TTSHHHHHTTCEECCHHHHSSCEECCEEEEE-E-TTEEEEEEECTTSSSSSTTS
T ss_pred HHHHHHHHhcCCCcceEEE---EC--CCCcHHHHcCCccccccccCcccceEEEEEE-e-CCEEEEEEecCCCCcceecc
Confidence 3466666654 4433 23 2346778888743 4999999 6 79988876542 24
Q ss_pred hHHHHHHH
Q 021955 219 PQPLGEML 226 (305)
Q Consensus 219 ~~~~l~~L 226 (305)
++.+++.|
T Consensus 152 ~~~~~~~~ 159 (167)
T 2wfc_A 152 APNILSQL 159 (167)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 56665554
No 397
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=21.14 E-value=1e+02 Score=24.50 Aligned_cols=97 Identities=12% Similarity=0.136 Sum_probs=58.4
Q ss_pred cccHHHHHHHHHHcC-CeEEEEeecC-CCccchhhhhccCC------CHHHHHHhhccEEEEEecCCChhHHHHHHhcCC
Q 021955 122 NGSFEKAKDAALAQD-KWLLVNLQST-KEFSSLMLNRDTWG------NEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNM 193 (305)
Q Consensus 122 ~gsf~~A~~~Ak~~~-KwLLVniq~~-~~f~c~~lnRDvw~------n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~Y~~ 193 (305)
..+..+|+..-++.+ ..+.|. .+. ..+---.--+|+.. +..|.+++ .++++...+..-.+..++...++
T Consensus 60 ~~~v~~a~~~m~~~~~~~~pVv-d~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~- 136 (172)
T 3lhh_A 60 NLPLDANLRTVMQSPHSRFPVC-RNNVDDMVGIISAKQLLSESIAGERLELVDLV-KNCNFVPNSLSGMELLEHFRTTG- 136 (172)
T ss_dssp TSCHHHHHHHHHTCCCSEEEEE-SSSTTSEEEEEEHHHHHHHHHTTCCCCGGGGC-BCCEEEETTCCHHHHHHHHHHHT-
T ss_pred CCCHHHHHHHHHhCCCCEEEEE-eCCCCeEEEEEEHHHHHHHHhhcCcccHHHHh-cCCeEeCCCCCHHHHHHHHHHcC-
Confidence 567888888776654 334433 332 33211111222221 34577777 77777766655567777777765
Q ss_pred CCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021955 194 DSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLP 228 (305)
Q Consensus 194 ~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~ 228 (305)
.+++.|+|. .|+. .|.++..++++.|..
T Consensus 137 --~~~~pVvd~-~g~l----vGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 137 --SQMVFVVDE-YGDL----KGLVTLQDMMDALTG 164 (172)
T ss_dssp --CSEEEEECT-TSCE----EEEEEHHHHHHHHHT
T ss_pred --CeEEEEEeC-CCCE----EEEeeHHHHHHHHhC
Confidence 477888885 4663 466788888887754
No 398
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=21.00 E-value=48 Score=24.92 Aligned_cols=101 Identities=13% Similarity=0.168 Sum_probs=56.6
Q ss_pred ccccccccHHHHHHHHHHcCCeEEEEeecCCCc----cchhhhh-----c-cCCCHHHHHHhhccEEEEEecCCChhHHH
Q 021955 117 FHVMFNGSFEKAKDAALAQDKWLLVNLQSTKEF----SSLMLNR-----D-TWGNEAVSQIISVNFIFWQEYDDTSEGWK 186 (305)
Q Consensus 117 ~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f----~c~~lnR-----D-vw~n~~V~~~i~~nFIfwq~~~ds~eg~~ 186 (305)
.-+-...+..+|+..-.+.+...++-+. .+.+ .-.-+-+ . .+.+..|.+++..+++....+..-.+..+
T Consensus 20 ~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~ 98 (135)
T 2rc3_A 20 VAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQVAYVDLNNTNEDCMA 98 (135)
T ss_dssp CEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCSCCCBCTTCBHHHHHH
T ss_pred EEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCCCeEECCCCcHHHHHH
Confidence 3334466799998877665543333232 2221 1111111 1 13455677777777666654444456666
Q ss_pred HHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHH
Q 021955 187 VCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLL 227 (305)
Q Consensus 187 ~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~ 227 (305)
....++ +.++.|+| .|+ +.|.++..+++..+.
T Consensus 99 ~m~~~~---~~~lpVvd--~g~----~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 99 LITEMR---VRHLPVLD--DGK----VIGLLSIGDLVKDAI 130 (135)
T ss_dssp HHHHHT---CSEEEEEE--TTE----EEEEEEHHHHHHHHH
T ss_pred HHHHhC---CCEEEEEe--CCE----EEEEEEHHHHHHHHH
Confidence 665554 56778888 476 346677888776654
No 399
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=20.95 E-value=2e+02 Score=21.11 Aligned_cols=97 Identities=12% Similarity=0.101 Sum_probs=54.5
Q ss_pred cccccHHHHHHHHHHcC-CeEEEEeecC-CCc----cchhhhhc---cCCCHHHHHHhhccEEEEEecCCChhHHHHHHh
Q 021955 120 MFNGSFEKAKDAALAQD-KWLLVNLQST-KEF----SSLMLNRD---TWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSF 190 (305)
Q Consensus 120 ~~~gsf~~A~~~Ak~~~-KwLLVniq~~-~~f----~c~~lnRD---vw~n~~V~~~i~~nFIfwq~~~ds~eg~~~~~~ 190 (305)
--..+..+|+..-.+.+ ..+.|. .+. ..+ .-.-+-|- -+.+..|.++++. .++...+..-.+..+....
T Consensus 19 ~~~~~~~~a~~~m~~~~~~~~pVv-d~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m~~-~~~v~~~~~l~~a~~~m~~ 96 (127)
T 3nqr_A 19 KRNQTLDECLDVIIESAHSRFPVI-SEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRT-AVVVPESKRVDRMLKEFRS 96 (127)
T ss_dssp ETTCCHHHHHHHHHHHCCSEEEEE-SSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHCBC-CCEEETTCBHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHhCCCCEEEEE-cCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHcCC-CeEECCCCcHHHHHHHHHh
Confidence 34667889888776654 344443 332 222 11122211 1356678999865 4444333333455555555
Q ss_pred cCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHH
Q 021955 191 YNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEML 226 (305)
Q Consensus 191 Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L 226 (305)
+ .++++.|+|. .|+. .|.++..++++.|
T Consensus 97 ~---~~~~lpVvd~-~g~~----~Giit~~dll~~l 124 (127)
T 3nqr_A 97 Q---RYHMAIVIDE-FGGV----SGLVTIEDILELI 124 (127)
T ss_dssp T---TCCEEEEECT-TSCE----EEEEEHHHHHHHC
T ss_pred c---CCeEEEEEeC-CCCE----EEEEEHHHHHHHH
Confidence 4 4678888885 4664 4667788877765
No 400
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=20.84 E-value=53 Score=27.06 Aligned_cols=40 Identities=0% Similarity=-0.263 Sum_probs=26.0
Q ss_pred CCeEEEEeecCCCccchhhhhccCCCHHHHHHhhccEEEEEec
Q 021955 136 DKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEY 178 (305)
Q Consensus 136 ~KwLLVniq~~~~f~c~~lnRDvw~n~~V~~~i~~nFIfwq~~ 178 (305)
+|..+|.+.+-+|..|..+...+ ..-.+++ +-.|+.+.+.
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~--~~~~~~~-~v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFL--PVISQEA-GTDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGH--HHHHHHH-TSCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHH--HHHHHHh-CCeEEEEecc
Confidence 67889999999999999996422 1222233 3345555553
No 401
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=20.77 E-value=78 Score=24.31 Aligned_cols=103 Identities=13% Similarity=0.076 Sum_probs=59.8
Q ss_pred ccccccHHHHHHHHHHcCCeEEEEeecCCCc----cchhhhh----------ccCCCHHHHHHhhccEEEEEecCCChhH
Q 021955 119 VMFNGSFEKAKDAALAQDKWLLVNLQSTKEF----SSLMLNR----------DTWGNEAVSQIISVNFIFWQEYDDTSEG 184 (305)
Q Consensus 119 l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f----~c~~lnR----------Dvw~n~~V~~~i~~nFIfwq~~~ds~eg 184 (305)
+-...+..+|+..-.+.+---++-+.+...+ .-.-+.+ ..|.+..|.+++..+++....+..-.+.
T Consensus 26 v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a 105 (157)
T 2emq_A 26 VQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERLETMKVEEVMNRNIPRLRLDDSLMKA 105 (157)
T ss_dssp BCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSBCGGGGGTCBGGGTCBCCCCEEETTSBHHHH
T ss_pred ECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccccchHHhcCCcHHHHhCCCCceecCCCcHHHH
Confidence 3345678888877666553222223222221 1111111 1234566788888888777665555677
Q ss_pred HHHHHhcCCCCCceEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021955 185 WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (305)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdprTGe~~~~~~G~~~~~~~l~~L~~fl~ 231 (305)
.+....+++ +.|+|. .|+ +.|.++..+++..+...+.
T Consensus 106 ~~~m~~~~~-----l~Vvd~-~g~----~~Giit~~dil~~~~~~~~ 142 (157)
T 2emq_A 106 VGLIVNHPF-----VCVEND-DGY----FAGIFTRREVLKQLNKQLH 142 (157)
T ss_dssp HHHHHHSSE-----EEEECS-SSS----EEEEEEHHHHHHHHHHTTC
T ss_pred HHHHhhCCE-----EEEEcC-CCe----EEEEEEHHHHHHHHHHHhh
Confidence 777766643 777885 465 3466788888887766544
No 402
>2j9w_A VPS28, VPS28-PROV protein; NZF finger, HIV budding, protein transport; 1.30A {Xenopus laevis}
Probab=20.18 E-value=52 Score=25.53 Aligned_cols=25 Identities=16% Similarity=0.123 Sum_probs=21.2
Q ss_pred cCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Q 021955 20 VGASGVTAIECLQATSWKLDEAILLFFAV 48 (305)
Q Consensus 20 tg~~~~~A~~~Le~~~wdLe~Av~~ff~~ 48 (305)
---++++|||+| +|||.|-+.|+..
T Consensus 75 deL~e~q~Rqll----fDle~aY~~F~~~ 99 (102)
T 2j9w_A 75 DELDDSQVRQML----FDLESAYNAFNRF 99 (102)
T ss_dssp CBCCHHHHHHHH----HHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHH----HHHHHHHHHHHHH
Confidence 445899999999 6899999999863
No 403
>2j9u_A VPS28, vacuolar protein sorting-associated protein 28; zinc-finger, metal-binding, protein transport; 2.00A {Saccharomyces cerevisiae} SCOP: a.24.28.1 PDB: 2j9v_A 2g3k_A
Probab=20.16 E-value=53 Score=25.22 Aligned_cols=24 Identities=25% Similarity=0.257 Sum_probs=20.8
Q ss_pred cCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021955 20 VGASGVTAIECLQATSWKLDEAILLFFA 47 (305)
Q Consensus 20 tg~~~~~A~~~Le~~~wdLe~Av~~ff~ 47 (305)
-.-++++|||+| +|||.|-+.|+.
T Consensus 70 deL~e~q~Rqll----fDle~aY~~F~~ 93 (96)
T 2j9u_A 70 DTLTETQIRELL----FDLELAYKSFYA 93 (96)
T ss_dssp CBCCHHHHHHHH----HHHHHHHHHHHH
T ss_pred ccCCHHHHHHHH----HHHHHHHHHHHH
Confidence 445899999999 689999999985
Done!