BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021956
(305 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q23571|ODB2_CAEEL Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex, mitochondrial
OS=Caenorhabditis elegans GN=ZK669.4 PE=3 SV=1
Length = 448
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 92/156 (58%), Gaps = 2/156 (1%)
Query: 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 148
+V L+ GEGIAE ++ +W+VKEGD I +F +C VQSDKA + I+ RY G V +L H
Sbjct: 30 VVQFKLSDIGEGIAEVQVKEWYVKEGDTISQFDKVCEVQSDKAAVTISCRYDGIVKKLYH 89
Query: 149 APGNIVKVGETLLKL-VVGDSAVP-TPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATP 206
+ +VG+ L+ + + G+ P P + S ++P + + + G VLATP
Sbjct: 90 EVDGMARVGQALIDVEIEGNVEEPEQPKKEAASSSPEAPKSSAPKAPESAHSEGKVLATP 149
Query: 207 TVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQ 242
VR +A I L +V TGKDGRVLKEDVLK+ Q
Sbjct: 150 AVRRIAIENKIKLAEVRGTGKDGRVLKEDVLKFLGQ 185
>sp|P11182|ODB2_HUMAN Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex, mitochondrial OS=Homo
sapiens GN=DBT PE=1 SV=3
Length = 482
Score = 107 bits (268), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 148
+V L+ GEGI E + +W+VKEGD + +F +C VQSDKA++ ITSRY G + +L +
Sbjct: 64 VVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYY 123
Query: 149 APGNIVKVGETLLKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTV 208
+I VG+ L+ + A+ DV+E+ E++ + T LATP V
Sbjct: 124 NLDDIAYVGKPLVD--IETEALKDSEEDVVETPAVSHDEHTHQEIKGRKT----LATPAV 177
Query: 209 RNLAKLYGINLYDVDATGKDGRVLKEDVLKY-AVQKGAADGPS 250
R LA I L +V +GKDGR+LKED+L Y Q GA PS
Sbjct: 178 RRLAMENNIKLSEVVGSGKDGRILKEDILNYLEKQTGAILPPS 220
>sp|P53395|ODB2_MOUSE Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex, mitochondrial OS=Mus
musculus GN=Dbt PE=2 SV=2
Length = 482
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
Query: 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 148
+V L+ GEGI E + +W+VKEGD + +F +C VQSDKA++ ITSRY G + +L +
Sbjct: 64 VVQFKLSDIGEGIREVTIKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKRLYY 123
Query: 149 APGNIVKVGETLLKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTV 208
+I VG+ L+ + A+ DV+E+ E++ + T LATP V
Sbjct: 124 NLDDIAYVGKPLID--IETEALKDSEEDVVETPAVSHDEHTHQEIKGQKT----LATPAV 177
Query: 209 RNLAKLYGINLYDVDATGKDGRVLKEDVLKY-AVQKGAADGPSTAS 253
R LA I L +V +GKDGR+LKED+L + Q GA PS S
Sbjct: 178 RRLAMENNIKLSEVVGSGKDGRILKEDILSFLEKQTGAILPPSPKS 223
>sp|P11181|ODB2_BOVIN Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex, mitochondrial OS=Bos taurus
GN=DBT PE=1 SV=2
Length = 482
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 91/163 (55%), Gaps = 7/163 (4%)
Query: 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 148
IV L+ GEGI E + +W+VKEGD + +F +C VQSDKA++ ITSRY G + +L +
Sbjct: 64 IVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYY 123
Query: 149 APGNIVKVGETLLKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTV 208
+ VG+ L+ + A+ DV+E+ E++ + T LATP V
Sbjct: 124 NLDDTAYVGKPLVD--IETEALKDSEEDVVETPAVSHDEHTHQEIKGQKT----LATPAV 177
Query: 209 RNLAKLYGINLYDVDATGKDGRVLKEDVLKY-AVQKGAADGPS 250
R LA I L +V +GKDGR+LKED+L Y Q GA PS
Sbjct: 178 RRLAMENNIKLSEVIGSGKDGRILKEDILNYLEKQTGAILPPS 220
>sp|Q8CT13|ODP2_STAES Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=pdhC PE=3 SV=1
Length = 433
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWF+K GD IEE L VQ+DK+ +EI S G V ++L G +
Sbjct: 7 LPDIGEGIHEGEIVKWFIKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVLVDEGTV 66
Query: 154 VKVGETLLKLVV-----------GDSAVPTPSSDVLES-VKPPGSENSPDSKLNKDTVGG 201
VG+ ++K+ GD ES V+ S K D
Sbjct: 67 AVVGDVIVKIDAPDAEEMQFKGHGDDEDSKKEEKEQESPVQEEASSTQSQEKTEVDESKT 126
Query: 202 VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADC 258
V A P+VR A+ G+N+ V+ +GK+GR+ KED+ Y + G+++ S SV+++
Sbjct: 127 VKAMPSVRKYARENGVNIKAVNGSGKNGRITKEDIDAY-LNGGSSEEGSNTSVASES 182
>sp|P11961|ODP2_GEOSE Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Geobacillus stearothermophilus
GN=pdhC PE=1 SV=3
Length = 428
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 82/175 (46%), Gaps = 50/175 (28%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWFVK GDE+ E LC VQ+DKA +EI S KGKV ++L G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPEGTV 66
Query: 154 VKVGETLLKLVVGDSAVPTPSSDVLESVKPPGSEN--------------------SPDSK 193
VG+TL+ L PG EN S + K
Sbjct: 67 ATVGQTLITL------------------DAPGYENMTFKGQEQEEAKKEEKTETVSKEEK 108
Query: 194 LNKDTVGG------------VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDV 236
++ V+A P+VR A+ G+++ V TGK+GRVLKED+
Sbjct: 109 VDAVAPNAPAAEAEAGPNRRVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDI 163
>sp|Q59821|ODP2_STAAU Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus GN=pdhC
PE=3 SV=1
Length = 430
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 90/174 (51%), Gaps = 13/174 (7%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 154 VKVGETLLKLVVGDSAVP--TPSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 204
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 205 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADC 258
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA P+ ++ SAD
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGA---PTASNESADS 176
>sp|Q8NX76|ODP2_STAAW Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MW2) GN=pdhC PE=3 SV=1
Length = 430
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 154 VKVGETLLKLVVGDSAVP--TPSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 204
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 205 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCRE 260
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA + ++ SA E
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGAPTASNESAASATSEE 181
>sp|Q6GAB9|ODP2_STAAS Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MSSA476) GN=pdhC PE=3 SV=1
Length = 430
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 154 VKVGETLLKLVVGDSAVP--TPSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 204
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 205 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCRE 260
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA + ++ SA E
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGAPTASNESAASATSEE 181
>sp|P65636|ODP2_STAAN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
N315) GN=pdhC PE=1 SV=1
Length = 430
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 154 VKVGETLLKLVVGDSAVP--TPSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 204
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 205 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCRE 260
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA + ++ SA E
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGAPTASNESAASATSEE 181
>sp|P65635|ODP2_STAAM Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=pdhC PE=1 SV=1
Length = 430
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 154 VKVGETLLKLVVGDSAVP--TPSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 204
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 205 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCRE 260
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA + ++ SA E
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGAPTASNESAASATSEE 181
>sp|Q5HGY9|ODP2_STAAC Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
COL) GN=pdhC PE=3 SV=1
Length = 430
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 154 VKVGETLLKLVVGDSAVP--TPSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 204
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 205 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCRE 260
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA + ++ SA E
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGAPTASNESAASATSEE 181
>sp|Q5HQ74|ODP2_STAEQ Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=pdhC PE=3 SV=1
Length = 433
Score = 87.8 bits (216), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWF+K GD IEE L VQ+DK+ +EI S G V ++L G +
Sbjct: 7 LPDIGEGIHEGEIVKWFIKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVLVDEGTV 66
Query: 154 VKVGETLLKLVV-----------GDSAVPTPSSDVLES-VKPPGSENSPDSKLNKDTVGG 201
VG+ ++K+ GD ES V+ S K D
Sbjct: 67 AVVGDVIVKIDAPDAEEMQFKGHGDDEDSKKEEKEQESPVQEEASSTQSQEKTEVDESKT 126
Query: 202 VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKY 239
V A P+VR A+ G+N+ V+ +GK+GR+ KED+ Y
Sbjct: 127 VKAMPSVRKYARENGVNIKAVNGSGKNGRITKEDIDAY 164
>sp|Q6GHZ0|ODP2_STAAR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MRSA252) GN=pdhC PE=3 SV=1
Length = 430
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWFVK GD IEE L VQ+DK+ +EI S G V +++ G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVMVEEGTV 66
Query: 154 VKVGETLLKLVVGDSAVP--TPSSDVLESVKPPGSENSPDSKL-------NKDTVGGVLA 204
VG+ ++K+ D+ D S + P E +P + D V A
Sbjct: 67 AVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDENRTVKA 126
Query: 205 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCRE 260
P+VR A+ G+N+ V +GK+GR+ KEDV Y + GA + ++ SA E
Sbjct: 127 MPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAY-LNGGAPTASNESAASATNEE 181
>sp|P21883|ODP2_BACSU Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Bacillus subtilis (strain 168)
GN=pdhC PE=1 SV=2
Length = 442
Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 25/168 (14%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
L GEGI E E++KWFVK DE++E L VQ+DKA +EI S KGKV +L G +
Sbjct: 7 LPDIGEGIHEGEIVKWFVKPNDEVDEDDVLAEVQNDKAVVEIPSPVKGKVLELKVEEGTV 66
Query: 154 VKVGETL----------LKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLN---KDTVG 200
VG+T+ L+ D + + ++S G + + + + K T
Sbjct: 67 ATVGQTIITFDAPGYEDLQFKGSDESDDAKTEAQVQSTAEAGQDVAKEEQAQEPAKATGA 126
Query: 201 G------------VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDV 236
G V+A P+VR A+ G+++ V +G +GRV+KED+
Sbjct: 127 GQQDQAEVDPNKRVIAMPSVRKYAREKGVDIRKVTGSGNNGRVVKEDI 174
>sp|P35489|ODP2_ACHLA Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Acholeplasma laidlawii GN=pdhC
PE=1 SV=1
Length = 544
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 148
I D A GEGI E +L+W K GD+++E + L V++DK E+ S G + +L
Sbjct: 113 IYDFKFADIGEGIHEGTILQWNFKVGDKVKEGETLVVVETDKVNAELPSPVDGTILKLGK 172
Query: 149 APGNIVKVGETLLKLVVGDSAVP-----TPSSDVLESVKPPGSENSPDSKLNKDTVGG-- 201
A G ++ VGET+ +++G + P ++ S G+ + +++ D +GG
Sbjct: 173 AEGEVIHVGETV--VLIGQNGATLEQAQAPKAEAPVSEPKKGAGVVGEIEVSDDIIGGSE 230
Query: 202 ----------VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDV 236
VLA+P R LA G+++ + +G+ GRV+K+DV
Sbjct: 231 EVHVVATTGKVLASPVARKLASDLGVDIATIKGSGEQGRVMKDDV 275
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 94 LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI 153
A GEGI E +L+W K GD+++E + L V++DK E+ S G + L G
Sbjct: 6 FADIGEGIHEGTVLQWNFKVGDKVKEGETLVIVETDKVNAELPSPVDGTIVSLGAKEGEE 65
Query: 154 VKVGETLLKL 163
+ VG+ ++ +
Sbjct: 66 IHVGQIIVTI 75
>sp|P09062|ODB2_PSEPU Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex OS=Pseudomonas putida GN=bkdB
PE=3 SV=1
Length = 423
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 92 VPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPG 151
+ + GEGIA+ EL++WFVK GD I E Q + V +DKAT+EI S GKV L PG
Sbjct: 6 IKMPDIGEGIAQVELVEWFVKVGDIIAEDQVVADVMTDKATVEIPSPVSGKVLALGGQPG 65
Query: 152 NIVKVGETLLKLVVGDSA--------------------VPTPSSDVLESVKPPGSENSPD 191
++ VG L+++ V S P P DV + + +
Sbjct: 66 EVMAVGSELIRIEVEGSGNHVDVPQAKPAEVPAAPVAAKPEPQKDVKPAAYQASASHEAA 125
Query: 192 SKLNKDTVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDV 236
+ + LA+P VR A GI L V +G GR+L ED+
Sbjct: 126 PIVPRQPGDKPLASPAVRKRALDAGIELRYVHGSGPAGRILHEDL 170
>sp|Q9I1M0|ODB2_PSEAE Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=bkdB PE=1 SV=1
Length = 428
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 39/185 (21%)
Query: 92 VPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPG 151
+ + GEGIAE EL++W V+ GD + E Q L V +DKAT+EI S G++ L PG
Sbjct: 6 IKMPDIGEGIAEVELVEWHVQVGDSVNEDQVLAEVMTDKATVEIPSPVAGRILALGGQPG 65
Query: 152 NIVKVGETLLKLVVGDSAVPTPS-------------------------------SDVLES 180
++ VG L++L V + S L
Sbjct: 66 QVMAVGGELIRLEVEGAGNLAESPAAATPAAPVAATPEKPKEAPVAAPKAAAEAPRALRD 125
Query: 181 VKPPGSENSPDSKLNKDTVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYA 240
+ P P + LA+P VR A+ GI L V +G GRVL ED+ Y
Sbjct: 126 SEAPRQRRQPGER--------PLASPAVRQRARDLGIELQFVQGSGPAGRVLHEDLDAYL 177
Query: 241 VQKGA 245
Q G+
Sbjct: 178 TQDGS 182
>sp|O06159|BKDC_MYCTU Dihydrolipoyllysine-residue acyltransferase component of
branched-chain alpha-ketoacid dehydrogenase complex
OS=Mycobacterium tuberculosis GN=bkdC PE=1 SV=2
Length = 393
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 82/147 (55%), Gaps = 5/147 (3%)
Query: 93 PLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGN 152
P+ GEG+ E + W V GD++E Q LC+V++ KA +EI S Y G++ +L A G+
Sbjct: 11 PVPDLGEGLQEVTVTCWSVAVGDDVEINQTLCSVETAKAEVEIPSPYAGRIVELGGAEGD 70
Query: 153 IVKVGETLLKLVVGDSAVPTPSSD-VLESVKPPGSENSPDSKLNKDTVGGVLATPTVRNL 211
++KVG L+++ G +AV P+ + + ++ G++ + ++ LA P VR L
Sbjct: 71 VLKVGAELVRIDTGPTAVAQPNGEGAVPTLVGYGADTAIETSRRTSR---PLAAPVVRKL 127
Query: 212 AKLYGINLYDVD-ATGKDGRVLKEDVL 237
AK ++L + +G G + + DVL
Sbjct: 128 AKELAVDLAALQRGSGAGGVITRADVL 154
>sp|Q5M729|OPD23_ARATH Dihydrolipoyllysine-residue acetyltransferase component 3 of
pyruvate dehydrogenase complex, mitochondrial
OS=Arabidopsis thaliana GN=At1g54220 PE=1 SV=1
Length = 539
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 35/203 (17%)
Query: 82 ADLPASGIVDVP-LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYK 140
+DLP + +P L+ T + E + +W KEGD++ + LC V++DKAT+E+ +
Sbjct: 106 SDLPPHQEIGMPSLSPT---MTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEE 162
Query: 141 GKVAQLLHAPGNI-VKVGETLLKLVVGD---------------------SAVPTPSSDVL 178
G +A+++ A G+ ++VGE ++ + V D A PTP+
Sbjct: 163 GYLAKIVKAEGSKEIQVGE-VIAITVEDEEDIGKFKDYTPSSTADAAPTKAEPTPAPPKE 221
Query: 179 ESVKPPGSENSPDSKLNK----DTVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKE 234
E VK P S P+ K +K T V A+P R LA+ + L D++ TG +GR++K
Sbjct: 222 EKVKQPSS--PPEPKASKPSTPPTGDRVFASPLARKLAEDNNVPLSDIEGTGPEGRIVKA 279
Query: 235 DVLKYAVQ--KGAADGPSTASVS 255
D+ +Y KGA PS ++ S
Sbjct: 280 DIDEYLASSGKGATAKPSKSTDS 302
>sp|Q1RHI5|ODO2_RICBR Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
bellii (strain RML369-C) GN=sucB PE=3 SV=1
Length = 400
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 77/142 (54%), Gaps = 5/142 (3%)
Query: 98 GEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVG 157
GE + E + KW+ KEGD ++ + L ++++K T+E+ S G + +++ A G V VG
Sbjct: 11 GESVTEATIAKWYKKEGDAVKTDELLLEIETEKVTLEVNSPCNGTIGKIIKADGANVAVG 70
Query: 158 ETLLKLVVGDSAVPTPSSDVLESVKP-PGSENSPDSKLNKDTVGGVLATPTVRNLAKLYG 216
E + + G+ AV T S+ E+ KP S+ P+ K V P+V+ L
Sbjct: 71 EEIGDINEGE-AVATNSN---EAAKPQTASQPVPEKVPKKPAVANNTLAPSVQKLVTENK 126
Query: 217 INLYDVDATGKDGRVLKEDVLK 238
++ ++ TGKDGR+ K DVL+
Sbjct: 127 LDPNNIKGTGKDGRITKGDVLE 148
>sp|P37942|ODB2_BACSU Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex OS=Bacillus subtilis (strain
168) GN=bfmBB PE=3 SV=1
Length = 424
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 148
I + + Q GE + E + KW V GD++ ++ P+ V +DK E+ S + G + +L+
Sbjct: 3 IEQMTMPQLGESVTEGTISKWLVAPGDKVNKYDPIAEVMTDKVNAEVPSSFTGTITELVG 62
Query: 149 APGNIVKVGETLLKLVVGDSAVPT-------PSSDVLES--VKPPGSENSPDSKLNKDTV 199
G ++VGE + K+ + A P +S+ E+ K G+ + P+ K
Sbjct: 63 EEGQTLQVGEMICKIET-EGANPAEQKQEQPAASEAAENPVAKSAGAADQPNKK------ 115
Query: 200 GGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLK 238
+P V LA +GI+L V TG GR+ ++D+ +
Sbjct: 116 ---RYSPAVLRLAGEHGIDLDQVTGTGAGGRITRKDIQR 151
>sp|P16263|ODO2_BACSU Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bacillus
subtilis (strain 168) GN=odhB PE=3 SV=2
Length = 417
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 86/161 (53%), Gaps = 12/161 (7%)
Query: 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 148
+ ++ + + E I+E + +W + GD +E+ + L +++DK +E+T+ G + ++L
Sbjct: 1 MAEIKVPELAESISEGTIAQWLKQPGDYVEQGEYLLELETDKVNVELTAEESGVLQEVLK 60
Query: 149 APGNIVKVGETL--LKLVVGDSAVPTPS--SDVLESVK------PPGSENSPDSKLNKDT 198
G+ V+VGE + + G+S+ P P+ ++ ESVK P E S +++ +
Sbjct: 61 DSGDTVQVGEIIGTISEGAGESSAPAPTEKTESKESVKEEKQAEPAAQEVSEEAQ--SEA 118
Query: 199 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKY 239
+A+P+ R LA+ GI+L V GRV K+DV Y
Sbjct: 119 KSRTIASPSARKLAREKGIDLSQVPTGDPLGRVRKQDVEAY 159
>sp|Q6FYD4|ODO2_BARQU Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bartonella
quintana (strain Toulouse) GN=sucB PE=3 SV=1
Length = 410
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 5/161 (3%)
Query: 98 GEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVG 157
GE + E + KWF K G+ + +PL +++DK T+E+ S GK+ +++ G+IV+V
Sbjct: 11 GESVTEATIGKWFKKLGEAVAVDEPLVELETDKVTVEVPSPVMGKLTEIIAKEGDIVEVN 70
Query: 158 ETLLKLVVGDSAVPTPSSDVLESV--KPPGSENSPDSKLNKDTVGGVLATPTVRNLAKLY 215
L + G + + S S+ P E SP S G + P+ L
Sbjct: 71 AVLGFVESGAAGISQSFSPSATSIPEAPSELEQSPSSSATPS--GTMPPAPSAAKLMAEN 128
Query: 216 GINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSA 256
I D+ +GK G++LKEDVL A+ +G S A+++A
Sbjct: 129 NIAKSDISGSGKRGQILKEDVLG-ALAQGTKASTSVATLTA 168
>sp|Q8RWN9|OPD22_ARATH Dihydrolipoyllysine-residue acetyltransferase component 2 of
pyruvate dehydrogenase complex, mitochondrial
OS=Arabidopsis thaliana GN=At3g13930 PE=1 SV=2
Length = 539
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 31/184 (16%)
Query: 82 ADLPASGIVDVP-LAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYK 140
+DLP + +P L+ T + E + +W KEGD++ + LC V++DKAT+E+ +
Sbjct: 106 SDLPPHQEIGMPSLSPT---MTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEE 162
Query: 141 GKVAQLLHAPG-NIVKVGETLLKLVVGDSAVP-----TPSSDV---------------LE 179
G +A+++ G ++VGE + V + + TPSSD E
Sbjct: 163 GFLAKIVKEEGAKEIQVGEVIAITVEDEDDIQKFKDYTPSSDTGPAAPEAKPAPSLPKEE 222
Query: 180 SVKPPGSENSPDSKLNKDTVG----GVLATPTVRNLAKLYGINLYDVDATGKDGRVLKED 235
V+ P S +P++K++K + + A+P R LA+ + L + TG +GR++K D
Sbjct: 223 KVEKPAS--APEAKISKPSSAPSEDRIFASPLARKLAEDNNVPLSSIKGTGPEGRIVKAD 280
Query: 236 VLKY 239
V +
Sbjct: 281 VEDF 284
>sp|Q89AQ9|ODP2_BUCBP Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Buchnera aphidicola subsp.
Baizongia pistaciae (strain Bp) GN=aceF PE=3 SV=1
Length = 410
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 27/156 (17%)
Query: 100 GIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGET 159
G E+++ VK GD++++ L V+ KA+IEI + + G + + IV +GE
Sbjct: 5 GTDLVEVIEILVKIGDQVKKDDSLITVEGQKASIEIPASHTGTIKNI------IVHIGE- 57
Query: 160 LLKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGG----------------VL 203
K+ G D ++VK +S K +K+T V
Sbjct: 58 --KITTGSLIAILNGID--DNVKSKNDSSSYSFKNSKNTSTNSNLGNVNNNINNRTILVH 113
Query: 204 ATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKY 239
ATPTVR LA+ + I L ++ TG+ GR+LKEDV+ Y
Sbjct: 114 ATPTVRRLARKFDIKLENITGTGRKGRILKEDVISY 149
>sp|Q1RJT3|ODP2_RICBR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia bellii (strain
RML369-C) GN=pdhC PE=3 SV=1
Length = 418
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 101 IAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLL------HAPGN-- 152
+ E L +W KEGD+I + + +++DKAT+E+ + +G +A+++ + P N
Sbjct: 14 MTEGNLARWLKKEGDKINPGEVIAEIETDKATMEVEAVDEGTLAKIIIPQGSQNVPVNSL 73
Query: 153 ---IVKVGETL--LKLVVGDSAVPTPSSDVL----ESVKPPGSENSPDSKLNKDTVGGVL 203
+++ GE L ++ + + +P + + E++ P + + + V
Sbjct: 74 IAVLIEEGEELSGIEEFIAKNNSNSPKKEEISKPAETIAPQNVKEENITTASDQNNIKVF 133
Query: 204 ATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQLL 263
A+P + LAK+ + + ++ +G GR++K+DVL + KG + S VS + E L
Sbjct: 134 ASPLAKRLAKIQNVRIEEIKGSGPHGRIIKQDVLSH---KGGSKALSNKIVSRNPEEYRL 190
Query: 264 GEEETYPQTFAEVKWYPDDKTVPLRFPQYWNCN 296
+ A+ + +TVP F CN
Sbjct: 191 APNNNIRKIIAK-RLLESKQTVP-HFYLSIECN 221
>sp|P45118|ODP2_HAEIN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=aceF PE=3 SV=1
Length = 567
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 40/192 (20%)
Query: 86 ASGIVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQ 145
AS IV+V + G E + + V GD I E Q L V+ DKA++E+ + + G V +
Sbjct: 105 ASAIVEVNVPDIGGD--EVNVTEIMVAVGDTITEEQSLITVEGDKASMEVPAPFGGVVKE 162
Query: 146 LLHAPGNIVKVGETLLKL-VVG---------------------------------DSAVP 171
+L G+ V G +++ V+G D+
Sbjct: 163 ILVKSGDKVSTGSLIMRFEVLGAAPAESASAPASTSAPQTAAPATTAQAPQAAAPDTTAQ 222
Query: 172 TPSSDVLESVKPPGSENSPDSKLNKDTV----GGVLATPTVRNLAKLYGINLYDVDATGK 227
P + ++ N+ S L+++ V G ATP +R LA+ +G+NL V TG+
Sbjct: 223 APQAAAPDTTAQAAQSNNNVSGLSQEQVEASTGYAHATPVIRRLAREFGVNLDKVKGTGR 282
Query: 228 DGRVLKEDVLKY 239
GR++KED+ Y
Sbjct: 283 KGRIVKEDIEAY 294
Score = 31.6 bits (70), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 100 GIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGET 159
G E + + V GD I Q + V+ DKA++E+ + G V ++L G+ V G
Sbjct: 11 GSDEVTVTEVMVNVGDTISVDQSIINVEGDKASMEVPAPEAGVVKEILVKVGDKVSTGTP 70
Query: 160 LLKL 163
+L L
Sbjct: 71 MLVL 74
>sp|Q8K9T8|ODP2_BUCAP Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=aceF PE=3 SV=2
Length = 402
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 3/142 (2%)
Query: 100 GIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGET 159
G+ E E+ + VK G+EI+ Q L V+ DKA++EI S G V + G VK
Sbjct: 5 GLEEVEVTEILVKIGEEIKLDQGLITVEGDKASMEIPSPISGIVKDITIKIGEKVKTSSI 64
Query: 160 LLKLVVGDSAVPTPSSDVLESVKPPG--SENSPDSKLNKDTVGGVLATPTVRNLAKLYGI 217
++ V + D L +K +EN + K + + V ATP VR LA+ +
Sbjct: 65 IMIFKVNNLNSIKNEKD-LNYIKTEKKLNENFLEEKKDIKKIVLVHATPVVRRLARHLNV 123
Query: 218 NLYDVDATGKDGRVLKEDVLKY 239
+L ++ +G R+LKED+ Y
Sbjct: 124 DLKNITPSGPKNRILKEDIELY 145
>sp|P06959|ODP2_ECOLI Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Escherichia coli (strain K12)
GN=aceF PE=1 SV=3
Length = 630
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 103 ECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLK 162
E E+ + VK GD++ Q L V+ DKA++E+ + + G V +L G+ VK G ++
Sbjct: 218 EVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMI 277
Query: 163 LVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGG----------VLATPTVRNLA 212
V +A + + P ++ + G V ATP +R LA
Sbjct: 278 FEVEGAAPAAAPAKQEAAAPAPAAKAEAPAAAPAAKAEGKSEFAENDAYVHATPLIRRLA 337
Query: 213 KLYGINLYDVDATGKDGRVLKEDVLKY 239
+ +G+NL V TG+ GR+L+EDV Y
Sbjct: 338 REFGVNLAKVKGTGRKGRILREDVQAY 364
Score = 38.1 bits (87), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 100 GIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGET 159
G E E+ + VK GD++E Q L V+ DKA++E+ + + G V ++ G+ V G
Sbjct: 114 GSDEVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEIKVNVGDKVSTGSL 173
Query: 160 LL 161
++
Sbjct: 174 IM 175
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 100 GIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGET 159
G E E+ + VK GD++E Q L V+ DKA++E+ S G V ++ + G+ + G
Sbjct: 11 GADEVEITEILVKVGDKVEAEQSLITVEGDKASMEVPSPQAGIVKEIKVSVGDKTQTGAL 70
Query: 160 LL 161
++
Sbjct: 71 IM 72
>sp|Q92J43|ODO2_RICCN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=sucB PE=3
SV=1
Length = 395
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 98 GEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVG 157
GE I E + KW+ K+GD ++ + L ++++K T+E+ + G + ++ G V VG
Sbjct: 11 GESITEATIAKWYKKQGDSVKTDELLLEIETEKVTLEVNAPCNGTIGKISKTEGANVAVG 70
Query: 158 ETLLKLVVGDSAVPTPSSD---VLESVKPPGSENSPDSKLNKDTVGGVLATPTVRNLAKL 214
E + ++ G SA +++ ++V P SE K V P+V+ L
Sbjct: 71 EEIGEINEGASANTAGTNNESAKAQAVTQPTSE--------KPAVANNTLAPSVQKLVTE 122
Query: 215 YGINLYDVDATGKDGRVLKEDVL 237
++ ++ TG+DGR+ K DVL
Sbjct: 123 NKLDPNNIKGTGRDGRITKGDVL 145
>sp|Q4UKI7|ODO2_RICFE Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=sucB PE=3 SV=1
Length = 401
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 98 GEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVG 157
GE + E + KW+ KEGD ++ + L ++++K T+E+ + G + ++ G V VG
Sbjct: 11 GESVTEATIAKWYKKEGDPVKTDELLLEIETEKVTLEVNAPCDGTIGKISKTDGANVAVG 70
Query: 158 ETLLKLVVG---DSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTVRNLAKL 214
E + ++ G ++A S ++V P SE P K V +LA P+V+ L
Sbjct: 71 EEIGEINEGAAANTAGTNNESAKAQAVTQPTSE-KPVEK--PAVVNNILA-PSVQKLVTE 126
Query: 215 YGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADCREQ 261
++ ++ TG+DGR+ K DVL+ AA T + + + R Q
Sbjct: 127 NKLDPNNIKGTGRDGRITKGDVLETINTPSAATSTPTVNKTNEERVQ 173
>sp|Q68WK6|ODP2_RICTY Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=pdhC PE=3 SV=1
Length = 404
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 22/160 (13%)
Query: 106 LLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVV 165
L +W KEGD++ + + +++DKAT+E+ S +G +A+++ P N V L V+
Sbjct: 19 LARWLKKEGDKVNPGEVIAEIETDKATMEVESVDEGILAKII-IPQNSQNVPVNSLIAVL 77
Query: 166 GDSAVPTPSSDVL-------------ESVKPPGSENSPDSKLNKDTVGGVLATPTVRNLA 212
+ T D ++ +E+ + ++ K + + A+P + LA
Sbjct: 78 SEEGESTADIDAFIAKNNSVSLSLKTDTTLKKANESITNVEVVKHDLSKIFASPLAKRLA 137
Query: 213 KLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTA 252
K+ I L V +G GR++K+D+L Y+ PSTA
Sbjct: 138 KIRNIRLESVQGSGPHGRIVKQDILSYS--------PSTA 169
>sp|P10802|ODP2_AZOVI Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Azotobacter vinelandii PE=1
SV=3
Length = 638
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Query: 103 ECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLK 162
+ +++ VK GD+++ Q L ++SDKA++EI S G V + V G+ +L
Sbjct: 235 KARVIEVLVKAGDQVQAEQSLIVLESDKASMEIPSPAAGVVESVAVQLNAEVGTGDQILT 294
Query: 163 LVVGDSAVPTP---SSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTVRNLAKLYGINL 219
L V +A P S + P + V A P VR LA+ +G+ L
Sbjct: 295 LRVAGAAPSGPRARGSPGQAAAAPGAAPAPAPVGAPSRNGAKVHAGPAVRQLAREFGVEL 354
Query: 220 YDVDATGKDGRVLKEDVLKY 239
+++TG GR+LKEDV Y
Sbjct: 355 AAINSTGPRGRILKEDVQAY 374
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 103 ECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLK 162
+ +++ VK GD+++ Q L ++SDKA++EI S G V + V G+ +L
Sbjct: 130 KARVIEVLVKAGDQVQAEQSLIVLESDKASMEIPSPASGVVESVAIQLNAEVGTGDLILT 189
Query: 163 L 163
L
Sbjct: 190 L 190
>sp|Q5HPC7|ODO2_STAEQ Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=odhB PE=3
SV=1
Length = 420
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 148
+ +V + + E I E + +W GD +++ + + +++DK +E+ S G +++ L
Sbjct: 1 MAEVKVPELAESITEGTIAEWLKNVGDNVDKGEAILELETDKVNVEVVSEEAGVLSEQLA 60
Query: 149 APGNIVKVGETLLKLVVGDSAVPTPSSDVLESVKPPGSE----------NSPDSKLNKD- 197
G+ V+VG+ + VVG+ V T + ES + ++ NS +S+ +D
Sbjct: 61 EEGDTVEVGQAV--AVVGEGQVNTSNDSSNESSQKDEAKEKETPKQSNPNSSESENTQDN 118
Query: 198 TVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKED 235
+ + ATP+ R A+ G++L +V G D VL++D
Sbjct: 119 SQQRINATPSARRHARKNGVDLSEVSGKGND--VLRKD 154
>sp|Q8CSL9|ODO2_STAES Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=odhB PE=3 SV=1
Length = 420
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 148
+ +V + + E I E + +W GD +++ + + +++DK +E+ S G +++ L
Sbjct: 1 MAEVKVPELAESITEGTIAEWLKNVGDNVDKGEAILELETDKVNVEVVSEEAGVLSEQLA 60
Query: 149 APGNIVKVGETLLKLVVGDSAVPTPSSDVLESVKPPGSE----------NSPDSKLNKD- 197
G+ V+VG+ + VVG+ V T + ES + ++ NS +S+ +D
Sbjct: 61 EEGDTVEVGQAV--AVVGEGQVNTSNDSSNESSQKDEAKEKETPKQSNPNSSESENTQDN 118
Query: 198 TVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKED 235
+ + ATP+ R A+ G++L +V G D VL++D
Sbjct: 119 SQQRINATPSARRHARKNGVDLSEVSGKGND--VLRKD 154
>sp|Q8NWR7|ODO2_STAAW Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain MW2) GN=odhB PE=3 SV=1
Length = 422
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 22/193 (11%)
Query: 91 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 150
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 151 GNIVKVGETLLKLVVG-------DSAVPTP-SSDVLESVKPPGSENSPD----SKLNKDT 198
G+ V+VG+ + + G +S TP ++ + K + NS D ++ N D
Sbjct: 63 GDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQANDDN 122
Query: 199 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADC 258
+ ATP+ R A+ G+NL +V D V KED+ K Q+ A +T SA
Sbjct: 123 QQRINATPSARRYARENGVNLAEVSPKTND-VVRKEDIDKK--QQAPASTQTTQQASA-- 177
Query: 259 REQLLGEEETYPQ 271
EE+ Y Q
Sbjct: 178 -----KEEKKYNQ 185
>sp|Q6G9E9|ODO2_STAAS Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain MSSA476) GN=odhB PE=3 SV=1
Length = 422
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 22/193 (11%)
Query: 91 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 150
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 151 GNIVKVGETLLKLVVG-------DSAVPTP-SSDVLESVKPPGSENSPD----SKLNKDT 198
G+ V+VG+ + + G +S TP ++ + K + NS D ++ N D
Sbjct: 63 GDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQANDDN 122
Query: 199 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADC 258
+ ATP+ R A+ G+NL +V D V KED+ K Q+ A +T SA
Sbjct: 123 QQRINATPSARRYARENGVNLAEVSPKTND-VVRKEDIDKK--QQAPASTQTTQQASA-- 177
Query: 259 REQLLGEEETYPQ 271
EE+ Y Q
Sbjct: 178 -----KEEKKYNQ 185
>sp|Q5HG07|ODO2_STAAC Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain COL) GN=odhB PE=3 SV=1
Length = 422
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 22/193 (11%)
Query: 91 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 150
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 151 GNIVKVGETLLKLVVG-------DSAVPTP-SSDVLESVKPPGSENSPD----SKLNKDT 198
G+ V+VG+ + + G +S TP ++ + K + NS D ++ N D
Sbjct: 63 GDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQANDDN 122
Query: 199 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADC 258
+ ATP+ R A+ G+NL +V D V KED+ K Q+ A +T SA
Sbjct: 123 QQRINATPSARRYARENGVNLAEVSPKTND-VVRKEDIDKK--QQAPASTQTTQQASA-- 177
Query: 259 REQLLGEEETYPQ 271
EE+ Y Q
Sbjct: 178 -----KEEKKYNQ 185
>sp|Q2FYM2|ODO2_STAA8 Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain NCTC 8325) GN=odhB PE=3 SV=1
Length = 422
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 22/193 (11%)
Query: 91 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 150
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 151 GNIVKVGETLLKLVVG-------DSAVPTP-SSDVLESVKPPGSENSPD----SKLNKDT 198
G+ V+VG+ + + G +S TP ++ + K + NS D ++ N D
Sbjct: 63 GDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQANDDN 122
Query: 199 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADC 258
+ ATP+ R A+ G+NL +V D V KED+ K Q+ A +T SA
Sbjct: 123 QQRINATPSARRYARENGVNLAEVSPKTND-VVRKEDIDKK--QQAPASTQTTQQASA-- 177
Query: 259 REQLLGEEETYPQ 271
EE+ Y Q
Sbjct: 178 -----KEEKKYNQ 185
>sp|Q2FH26|ODO2_STAA3 Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain USA300) GN=odhB PE=3 SV=1
Length = 422
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 22/193 (11%)
Query: 91 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 150
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 151 GNIVKVGETLLKLVVG-------DSAVPTP-SSDVLESVKPPGSENSPD----SKLNKDT 198
G+ V+VG+ + + G +S TP ++ + K + NS D ++ N D
Sbjct: 63 GDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQANDDN 122
Query: 199 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTASVSADC 258
+ ATP+ R A+ G+NL +V D V KED+ K Q+ A +T SA
Sbjct: 123 QQRINATPSARRYARENGVNLAEVSPKTND-VVRKEDIDKK--QQAPASTQTTQQASA-- 177
Query: 259 REQLLGEEETYPQ 271
EE+ Y Q
Sbjct: 178 -----KEEKKYNQ 185
>sp|Q6GGZ6|ODO2_STAAR Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain MRSA252) GN=odhB PE=3 SV=1
Length = 423
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 91 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 150
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNLGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 151 GNIVKVGETLLKLVVGDSA-----------VPTPSSDVLESVKPPGSENSPD----SKLN 195
G+ V+VG+ + V+G+ + P + + + K + S D ++ N
Sbjct: 63 GDTVEVGQAI--AVIGEGSGNASKENSNDNTPQQNDETTNNKKEETTNKSADKAEVNQTN 120
Query: 196 KDTVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLK 238
D V ATP+ R A+ G+NL +V D V KED+ K
Sbjct: 121 DDNQQRVNATPSARRYARENGVNLAEVSPKTND-VVRKEDIDK 162
>sp|P57302|ODP2_BUCAI Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=aceF PE=3 SV=1
Length = 396
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 4/140 (2%)
Query: 100 GIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGET 159
G+ E E+++ V ++I Q L V+ DK ++EI S G V + G +K
Sbjct: 5 GLEEVEIIEILVSINEKIAPEQGLITVEGDKTSMEIPSPISGIVKHIFIKIGEKIKTDAL 64
Query: 160 LLKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTVRNLAKLYGINL 219
+++ V + + E N + KD ATP +R LA+ INL
Sbjct: 65 IMRCEVENIDFHVKKKE--EICLDNNVLNKVEKNFKKDIFFH--ATPLIRRLARNLNINL 120
Query: 220 YDVDATGKDGRVLKEDVLKY 239
YDV TG R+LKED+ Y
Sbjct: 121 YDVVGTGPKNRILKEDLDLY 140
>sp|Q9ZD20|ODP2_RICPR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia prowazekii (strain
Madrid E) GN=pdhC PE=3 SV=1
Length = 408
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 14/150 (9%)
Query: 103 ECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLK 162
E L +W KEGD++ + + +++DKAT+E+ S +G +A+++ P N V L
Sbjct: 16 EGNLARWLKKEGDKVNPGEVIAEIETDKATMEVESVDEGILAKII-IPQNSQNVPVNSLI 74
Query: 163 LVVG---------DSAVPTPSSDVLESVKPPGSENSPDSKLN----KDTVGGVLATPTVR 209
V+ DS + +S L + S DS N K + A+P +
Sbjct: 75 AVLSEEGEDKADIDSFIAQNNSVSLSLKTDATLKKSNDSITNVEGIKHDSNKIFASPLAK 134
Query: 210 NLAKLYGINLYDVDATGKDGRVLKEDVLKY 239
LAK+ I L +V +G GR++K+D+L Y
Sbjct: 135 RLAKIGDIRLENVQGSGPHGRIVKQDILSY 164
>sp|Q92HK7|ODP2_RICCN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=pdhC PE=3 SV=1
Length = 412
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 37/219 (16%)
Query: 101 IAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETL 160
+ E L +W KEGD++ + + +++DKAT+E+ + +G +A+++ P N V
Sbjct: 14 MTEGNLARWLKKEGDKVNPGEVIAEIETDKATMEVEAVDEGILAKIV-IPQNSQNVPVNS 72
Query: 161 LKLVV----------------GDSAVPTPSSDVLESVKPPGSENSPDSK----LNKDTVG 200
L V+ +S P+P +D + P EN + + + K V
Sbjct: 73 LIAVLSEEGEEKTDIDAFIAKNNSVSPSPKTD---ANLPKPHENIANVEEQVTVIKHDVS 129
Query: 201 GVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGAADGPSTAS---VSAD 257
+ A+P + LAK+ I V +G GR++K+D+L Y PSTA VS +
Sbjct: 130 RIFASPLAKRLAKMRNIRFESVKGSGPHGRIVKQDILSYT--------PSTAHNKIVSRN 181
Query: 258 CREQLLGEEETYPQTFAEVKWYPDDKTVPLRFPQYWNCN 296
E L + A+ + +TVP F CN
Sbjct: 182 PEEYRLVPNNNIRKIIAK-RLLESKQTVP-HFYLSIECN 218
>sp|Q7A5N4|ODO2_STAAN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain N315) GN=odhB PE=1 SV=1
Length = 422
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 13/160 (8%)
Query: 91 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 150
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 151 GNIVKVGETLLKLVVG-------DSAVPTP-SSDVLESVKPPGSENSPD----SKLNKDT 198
G+ V+VG+ + + G +S TP ++ + K + NS D ++ N D
Sbjct: 63 GDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQANDDN 122
Query: 199 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLK 238
+ ATP+ R A+ G+NL +V D V KED+ K
Sbjct: 123 QQRINATPSARRYARENGVNLAEVSPKTND-VVRKEDIDK 161
>sp|Q99U75|ODO2_STAAM Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=odhB PE=1 SV=1
Length = 422
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 13/160 (8%)
Query: 91 DVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 150
+V + + E I E + +W GD +E+ + + +++DK +E+ S G +++ L +
Sbjct: 3 EVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASE 62
Query: 151 GNIVKVGETLLKLVVG-------DSAVPTP-SSDVLESVKPPGSENSPD----SKLNKDT 198
G+ V+VG+ + + G +S TP ++ + K + NS D ++ N D
Sbjct: 63 GDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQANDDN 122
Query: 199 VGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLK 238
+ ATP+ R A+ G+NL +V D V KED+ K
Sbjct: 123 QQRINATPSARRYARENGVNLAEVSPKTND-VVRKEDIDK 161
>sp|O31550|ACOC_BACSU Dihydrolipoyllysine-residue acetyltransferase component of acetoin
cleaving system OS=Bacillus subtilis (strain 168)
GN=acoC PE=3 SV=1
Length = 398
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 90 VDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHA 149
V V + + G + + E+ W K GD +E+ + + ++QS+K +EI + KG + +
Sbjct: 3 VKVVMPKLGMAMKQGEVSIWNKKVGDPVEKGESIASIQSEKIEMEIEAPEKGTLIDIKVK 62
Query: 150 PGNIVKVGETLLKL------VVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGGVL 203
G V G + + V ++ P ++ ++V+P EN P + KD +
Sbjct: 63 EGEEVPPGTAICYIGDANESVQEEAGAPVAEDNMPQAVQPVKQENKPAAS-KKDRMK--- 118
Query: 204 ATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLK 238
+P R +A+ G++L + TG GR++K+DV K
Sbjct: 119 ISPVARKIAEKAGLDLKQLKGTGPGGRIVKDDVTK 153
>sp|Q8GCY1|ODO2_BARVB Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bartonella
vinsonii subsp. berkhofii GN=sucB PE=3 SV=1
Length = 411
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 98 GEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVG 157
GE + E + KWF K G+ + +PL +++DK T+E+ S GK+ +++ G+ V+V
Sbjct: 11 GESVTEATVGKWFKKLGEAVAIDEPLVELETDKVTVEVPSPVAGKLFEIIAKEGDTVEVN 70
Query: 158 ETLLKLVVGDSAVPTPSSDVLESVKPPGSENSPDSKLNKDTVGGVLATPTVRNLAKLYGI 217
L + G ++V S SV SE S N + P+ L I
Sbjct: 71 ALLGAVEAGAASVAKSPSSSETSVSAAPSELEQSSSSNT-----MPPAPSAAKLMAENNI 125
Query: 218 NLYDVDATGKDGRVLKEDVLKYAVQ 242
D+ +GK G++LKEDVL Q
Sbjct: 126 AKSDILGSGKRGQILKEDVLNVLAQ 150
>sp|O66119|ODP2_ZYMMO Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Zymomonas mobilis subsp.
mobilis (strain ATCC 31821 / ZM4 / CP4) GN=pdhC PE=3
SV=2
Length = 440
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 34/187 (18%)
Query: 101 IAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLL-------HAPGNI 153
+ E L KW VKEGD ++ L +++DKA +E + G +A++L A G +
Sbjct: 14 MTEGTLAKWLVKEGDAVKAGDILAEIETDKAIMEFETVDAGIIAKILVPEGSENIAVGQV 73
Query: 154 VKV----GETLLKLVVGDSAV---PTPSSDVLESVKPPGSENSPDSKLNK---------- 196
+ V GE + ++ S+ P+ +DV + S D+ L+K
Sbjct: 74 IAVMAEAGEDVSQVAASASSQISEPSEKADVAQKETADSETISIDASLDKAISNAGYGNK 133
Query: 197 ---------DTVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKG-AA 246
+ G + A+P + LAK ++L V+ +G GR++K D+ + + A+
Sbjct: 134 TENMTASYQEKAGRIKASPLAKRLAKKNHVDLKQVNGSGPHGRIIKADIEAFIAEANQAS 193
Query: 247 DGPSTAS 253
PS ++
Sbjct: 194 SNPSVST 200
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,690,867
Number of Sequences: 539616
Number of extensions: 5207406
Number of successful extensions: 11546
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 11316
Number of HSP's gapped (non-prelim): 166
length of query: 305
length of database: 191,569,459
effective HSP length: 117
effective length of query: 188
effective length of database: 128,434,387
effective search space: 24145664756
effective search space used: 24145664756
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)