Query 021956
Match_columns 305
No_of_seqs 316 out of 1952
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 11:51:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021956.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021956hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zy8_K Pyruvate dehydrogenase 100.0 4.4E-31 1.5E-35 240.8 4.1 155 89-243 3-170 (229)
2 3dva_I Dihydrolipoyllysine-res 100.0 2.2E-31 7.4E-36 262.2 0.9 152 90-241 3-168 (428)
3 3crk_C Dihydrolipoyllysine-res 99.8 6.5E-18 2.2E-22 131.2 11.7 79 89-167 5-84 (87)
4 2dnc_A Pyruvate dehydrogenase 99.7 1.1E-17 3.6E-22 133.4 12.5 80 89-168 7-87 (98)
5 1k8m_A E2 component of branche 99.7 7E-18 2.4E-22 133.1 10.7 80 89-168 4-83 (93)
6 1y8o_B Dihydrolipoyllysine-res 99.7 1.3E-17 4.4E-22 139.5 11.6 79 89-167 27-106 (128)
7 2dne_A Dihydrolipoyllysine-res 99.7 1.7E-17 5.9E-22 134.6 10.0 78 89-166 7-85 (108)
8 1ghj_A E2, E2, the dihydrolipo 99.7 2.4E-17 8.3E-22 125.2 9.1 76 90-165 2-77 (79)
9 2l5t_A Lipoamide acyltransfera 99.7 9.5E-17 3.3E-21 121.2 8.8 75 90-164 2-76 (77)
10 1qjo_A Dihydrolipoamide acetyl 99.7 2.8E-16 9.6E-21 119.3 9.4 75 90-166 3-77 (80)
11 1pmr_A Dihydrolipoyl succinylt 99.6 1.1E-17 3.6E-22 127.8 -0.5 76 90-165 3-78 (80)
12 1iyu_A E2P, dihydrolipoamide a 99.6 1.5E-15 5.2E-20 115.2 10.1 75 90-167 2-76 (79)
13 1gjx_A Pyruvate dehydrogenase; 99.6 5.6E-16 1.9E-20 118.0 5.1 77 89-166 2-78 (81)
14 2k7v_A Dihydrolipoyllysine-res 99.5 1E-14 3.6E-19 112.4 1.6 72 90-167 3-74 (85)
15 1z6h_A Biotin/lipoyl attachmen 99.4 1E-12 3.5E-17 97.1 8.9 65 102-166 6-70 (72)
16 2kcc_A Acetyl-COA carboxylase 99.4 1.1E-12 3.8E-17 101.1 6.7 65 102-167 12-76 (84)
17 2jku_A Propionyl-COA carboxyla 99.3 4.5E-13 1.5E-17 105.4 3.0 76 89-164 15-94 (94)
18 2dn8_A Acetyl-COA carboxylase 99.3 4.4E-12 1.5E-16 100.6 8.4 64 102-166 24-87 (100)
19 2d5d_A Methylmalonyl-COA decar 99.3 7.6E-12 2.6E-16 92.6 8.9 63 102-164 12-74 (74)
20 1dcz_A Transcarboxylase 1.3S s 99.3 7.6E-12 2.6E-16 93.7 8.5 63 102-164 15-77 (77)
21 2ejm_A Methylcrotonoyl-COA car 99.3 1.3E-11 4.5E-16 97.8 9.3 67 102-168 21-87 (99)
22 1bdo_A Acetyl-COA carboxylase; 99.3 8.1E-12 2.8E-16 94.6 7.2 62 103-164 12-80 (80)
23 2eq9_C Pyruvate dehydrogenase 99.2 7.3E-12 2.5E-16 84.4 4.2 38 203-240 2-39 (41)
24 2eq8_C Pyruvate dehydrogenase 99.2 1.1E-11 3.9E-16 83.0 4.4 38 203-240 1-38 (40)
25 2eq7_C 2-oxoglutarate dehydrog 99.2 7.9E-12 2.7E-16 83.7 2.5 38 203-240 1-38 (40)
26 3rnm_E Lipoamide acyltransfera 99.2 1.7E-11 5.7E-16 89.2 3.9 42 201-242 7-48 (58)
27 3n6r_A Propionyl-COA carboxyla 99.2 5.2E-11 1.8E-15 123.1 9.0 62 103-164 620-681 (681)
28 1w4i_A Pyruvate dehydrogenase 99.1 3.8E-11 1.3E-15 88.3 5.5 45 201-245 4-48 (62)
29 2coo_A Lipoamide acyltransfera 99.1 1.2E-10 4.2E-15 87.6 6.8 43 201-243 15-57 (70)
30 1w85_I Dihydrolipoyllysine-res 99.1 3.3E-11 1.1E-15 84.4 3.4 41 201-241 6-46 (49)
31 3va7_A KLLA0E08119P; carboxyla 99.1 1.7E-10 5.7E-15 126.1 8.9 61 103-163 1175-1235(1236)
32 3hbl_A Pyruvate carboxylase; T 99.1 2.2E-10 7.5E-15 124.5 9.0 64 103-166 1085-1148(1150)
33 3u9t_A MCC alpha, methylcroton 99.0 1.9E-11 6.7E-16 126.1 0.0 64 103-166 610-673 (675)
34 1bal_A Dihydrolipoamide succin 99.0 6.1E-11 2.1E-15 83.8 1.4 40 201-240 9-48 (51)
35 2f60_K Pyruvate dehydrogenase 99.0 1.6E-10 5.4E-15 85.5 3.2 41 202-242 10-50 (64)
36 2k32_A A; NMR {Campylobacter j 98.9 2.1E-09 7E-14 86.6 6.4 66 102-167 8-103 (116)
37 3bg3_A Pyruvate carboxylase, m 98.8 1.6E-09 5.5E-14 112.6 3.4 62 103-164 657-718 (718)
38 2qf7_A Pyruvate carboxylase pr 98.7 5.3E-09 1.8E-13 113.9 5.6 62 103-164 1103-1164(1165)
39 1zko_A Glycine cleavage system 98.7 1.4E-08 4.7E-13 85.6 6.9 72 90-167 37-116 (136)
40 1hpc_A H protein of the glycin 98.3 3.9E-07 1.3E-11 76.1 4.1 71 90-166 28-106 (131)
41 3a7l_A H-protein, glycine clea 98.3 9.9E-07 3.4E-11 73.4 5.8 72 89-166 28-107 (128)
42 1onl_A Glycine cleavage system 98.2 1.5E-06 5.1E-11 72.3 5.7 72 89-166 27-106 (128)
43 3ne5_B Cation efflux system pr 98.1 5E-06 1.7E-10 80.6 8.1 64 102-165 128-240 (413)
44 2f1m_A Acriflavine resistance 98.1 1.5E-06 5.3E-11 78.8 3.6 65 102-166 29-166 (277)
45 3lnn_A Membrane fusion protein 98.1 5.5E-06 1.9E-10 77.8 7.3 65 102-166 64-205 (359)
46 3fpp_A Macrolide-specific effl 98.0 5.7E-06 1.9E-10 77.1 6.2 64 102-165 38-189 (341)
47 1vf7_A Multidrug resistance pr 97.8 9.1E-06 3.1E-10 77.3 3.2 64 102-165 50-172 (369)
48 3klr_A Glycine cleavage system 97.7 4.6E-05 1.6E-09 63.2 6.1 47 104-150 32-79 (125)
49 3mxu_A Glycine cleavage system 97.6 8.8E-05 3E-09 62.8 6.1 46 104-149 54-100 (143)
50 3tzu_A GCVH, glycine cleavage 97.5 8.9E-05 3.1E-09 62.3 5.3 46 104-149 49-95 (137)
51 4dk0_A Putative MACA; alpha-ha 97.5 8.2E-06 2.8E-10 76.7 -2.3 63 102-164 39-189 (369)
52 3hgb_A Glycine cleavage system 97.3 0.00034 1.2E-08 59.9 6.1 45 104-148 59-104 (155)
53 3na6_A Succinylglutamate desuc 96.9 0.0021 7.3E-08 60.7 8.3 61 103-166 265-329 (331)
54 2dn8_A Acetyl-COA carboxylase 96.9 0.00048 1.6E-08 53.9 3.1 48 119-166 4-51 (100)
55 3cdx_A Succinylglutamatedesucc 96.8 0.0029 1E-07 60.1 8.4 62 103-167 275-340 (354)
56 3fmc_A Putative succinylglutam 96.7 0.0033 1.1E-07 60.3 8.0 60 104-165 298-363 (368)
57 1z6h_A Biotin/lipoyl attachmen 96.1 0.0063 2.2E-07 43.9 4.6 33 134-166 1-33 (72)
58 2d5d_A Methylmalonyl-COA decar 96.1 0.0084 2.9E-07 43.2 5.0 34 133-166 6-39 (74)
59 1dcz_A Transcarboxylase 1.3S s 96.0 0.0083 2.8E-07 43.9 4.8 35 132-166 8-42 (77)
60 2k32_A A; NMR {Campylobacter j 95.9 0.0092 3.1E-07 47.3 4.8 34 133-166 2-35 (116)
61 2qj8_A MLR6093 protein; struct 95.8 0.022 7.5E-07 53.4 7.8 60 104-165 265-328 (332)
62 2f1m_A Acriflavine resistance 95.5 0.015 5.2E-07 52.2 5.4 54 112-166 3-56 (277)
63 2kcc_A Acetyl-COA carboxylase 95.4 0.0091 3.1E-07 45.1 3.2 35 132-166 5-39 (84)
64 1f3z_A EIIA-GLC, glucose-speci 95.4 0.016 5.4E-07 49.8 4.7 60 102-165 19-117 (161)
65 2gpr_A Glucose-permease IIA co 95.1 0.017 5.7E-07 49.3 3.9 59 103-165 15-112 (154)
66 2xha_A NUSG, transcription ant 95.0 0.024 8.1E-07 50.1 4.8 32 108-145 22-53 (193)
67 1ax3_A Iiaglc, glucose permeas 94.8 0.025 8.4E-07 48.6 4.4 61 102-166 19-118 (162)
68 3lnn_A Membrane fusion protein 94.8 0.024 8E-07 52.8 4.6 58 110-167 34-92 (359)
69 3fpp_A Macrolide-specific effl 94.6 0.031 1.1E-06 51.6 5.0 56 110-166 10-65 (341)
70 2ejm_A Methylcrotonoyl-COA car 94.5 0.03 1E-06 43.5 3.8 36 131-166 13-48 (99)
71 2jku_A Propionyl-COA carboxyla 94.4 0.022 7.5E-07 43.9 2.8 35 132-166 25-59 (94)
72 1bdo_A Acetyl-COA carboxylase; 94.3 0.034 1.2E-06 41.0 3.5 34 133-166 5-45 (80)
73 2l5t_A Lipoamide acyltransfera 93.7 0.061 2.1E-06 39.3 4.0 27 102-128 51-77 (77)
74 2xhc_A Transcription antitermi 93.5 0.073 2.5E-06 50.9 5.1 48 108-161 62-138 (352)
75 3ne5_B Cation efflux system pr 93.0 0.089 3E-06 50.6 4.9 61 106-166 94-156 (413)
76 1ghj_A E2, E2, the dihydrolipo 92.9 0.089 3E-06 38.7 3.8 27 103-129 52-78 (79)
77 1vf7_A Multidrug resistance pr 92.8 0.066 2.3E-06 50.5 3.7 54 112-166 24-77 (369)
78 1qjo_A Dihydrolipoamide acetyl 92.7 0.075 2.6E-06 39.0 3.1 27 103-129 51-77 (80)
79 3crk_C Dihydrolipoyllysine-res 92.2 0.1 3.5E-06 39.3 3.4 29 102-130 55-84 (87)
80 1iyu_A E2P, dihydrolipoamide a 92.1 0.13 4.3E-06 37.8 3.8 27 103-129 49-75 (79)
81 3d4r_A Domain of unknown funct 92.1 0.2 6.8E-06 43.2 5.4 49 103-151 108-157 (169)
82 1k8m_A E2 component of branche 92.1 0.14 4.9E-06 39.2 4.1 28 102-129 54-81 (93)
83 1gjx_A Pyruvate dehydrogenase; 91.9 0.11 3.9E-06 38.2 3.3 31 136-166 11-41 (81)
84 2auk_A DNA-directed RNA polyme 91.6 0.21 7.1E-06 43.7 5.1 46 108-155 63-108 (190)
85 2dnc_A Pyruvate dehydrogenase 91.3 0.21 7.2E-06 38.7 4.4 29 139-167 20-48 (98)
86 4dk0_A Putative MACA; alpha-ha 91.3 0.057 1.9E-06 50.3 1.2 55 111-166 12-66 (369)
87 2xha_A NUSG, transcription ant 89.9 0.14 4.9E-06 45.1 2.5 46 111-162 85-158 (193)
88 1y8o_B Dihydrolipoyllysine-res 89.8 0.24 8.3E-06 40.7 3.6 29 102-130 77-106 (128)
89 2dne_A Dihydrolipoyllysine-res 89.7 0.21 7.2E-06 39.5 3.1 28 139-166 20-47 (108)
90 2k7v_A Dihydrolipoyllysine-res 89.5 0.14 4.7E-06 38.4 1.8 36 89-130 39-74 (85)
91 3hbl_A Pyruvate carboxylase; T 88.3 0.86 2.9E-05 49.7 7.6 35 132-166 1077-1111(1150)
92 3n6r_A Propionyl-COA carboxyla 87.0 0.54 1.9E-05 48.4 4.8 35 132-166 612-646 (681)
93 1pmr_A Dihydrolipoyl succinylt 86.5 0.11 3.8E-06 38.3 -0.4 30 138-167 14-43 (80)
94 3our_B EIIA, phosphotransferas 86.3 1.2 4E-05 38.9 5.9 60 103-166 42-140 (183)
95 2gpr_A Glucose-permease IIA co 85.0 0.53 1.8E-05 39.9 3.0 58 103-163 87-153 (154)
96 3lu0_D DNA-directed RNA polyme 83.8 0.9 3.1E-05 50.2 4.8 34 108-143 1002-1035(1407)
97 3va7_A KLLA0E08119P; carboxyla 82.8 1 3.6E-05 49.5 4.9 36 131-166 1166-1201(1236)
98 2bco_A Succinylglutamate desuc 81.1 1.2 4.2E-05 42.0 4.2 50 109-165 279-328 (350)
99 2xhc_A Transcription antitermi 81.0 0.4 1.4E-05 45.8 0.8 51 111-162 125-198 (352)
100 3bg3_A Pyruvate carboxylase, m 80.8 0.95 3.2E-05 47.1 3.5 34 133-166 650-683 (718)
101 3dva_I Dihydrolipoyllysine-res 77.5 0.47 1.6E-05 46.3 0.0 31 101-131 51-81 (428)
102 1ax3_A Iiaglc, glucose permeas 76.3 0.99 3.4E-05 38.5 1.7 27 103-129 92-118 (162)
103 2qf7_A Pyruvate carboxylase pr 76.2 1.8 6.3E-05 47.2 4.2 34 133-166 1096-1129(1165)
104 3u9t_A MCC alpha, methylcroton 76.0 0.54 1.9E-05 48.3 0.0 35 132-166 602-636 (675)
105 3our_B EIIA, phosphotransferas 75.9 1.4 4.9E-05 38.4 2.7 28 103-130 114-141 (183)
106 1f3z_A EIIA-GLC, glucose-speci 75.2 2.1 7.3E-05 36.4 3.5 27 103-129 92-118 (161)
107 3it5_A Protease LASA; metallop 74.6 14 0.00049 31.6 8.7 64 88-165 33-104 (182)
108 1zy8_K Pyruvate dehydrogenase 70.8 0.86 2.9E-05 40.8 0.0 28 102-129 53-81 (229)
109 3fmc_A Putative succinylglutam 66.8 4.4 0.00015 38.5 4.0 33 132-165 290-322 (368)
110 3na6_A Succinylglutamate desuc 65.3 5.3 0.00018 37.3 4.2 36 130-166 255-290 (331)
111 1qpo_A Quinolinate acid phosph 59.1 6.5 0.00022 36.2 3.5 24 105-128 71-94 (284)
112 1x1o_A Nicotinate-nucleotide p 57.2 6.2 0.00021 36.4 3.1 22 107-128 74-95 (286)
113 1o4u_A Type II quinolic acid p 56.1 6.2 0.00021 36.4 2.8 22 107-128 73-94 (285)
114 3tqv_A Nicotinate-nucleotide p 55.9 6.8 0.00023 36.3 3.1 22 107-128 77-98 (287)
115 3it5_A Protease LASA; metallop 55.3 4.8 0.00016 34.6 1.8 24 105-128 81-104 (182)
116 1brw_A PYNP, protein (pyrimidi 55.3 15 0.00053 35.7 5.6 41 127-167 330-401 (433)
117 2b7n_A Probable nicotinate-nuc 55.2 8.4 0.00029 35.0 3.5 22 107-128 60-81 (273)
118 3l0g_A Nicotinate-nucleotide p 55.0 7.4 0.00025 36.3 3.2 23 106-128 85-107 (300)
119 2dsj_A Pyrimidine-nucleoside ( 53.9 15 0.00052 35.7 5.3 40 127-167 323-393 (423)
120 3gnn_A Nicotinate-nucleotide p 53.0 8 0.00027 36.0 3.1 22 107-128 88-109 (298)
121 3h5q_A PYNP, pyrimidine-nucleo 52.6 15 0.00052 35.9 5.1 36 129-164 335-401 (436)
122 3cdx_A Succinylglutamatedesucc 51.6 18 0.00061 33.8 5.3 38 127-165 262-299 (354)
123 1qap_A Quinolinic acid phospho 51.5 8.8 0.0003 35.5 3.1 23 106-128 86-108 (296)
124 3paj_A Nicotinate-nucleotide p 51.2 8.8 0.0003 36.1 3.1 25 104-128 107-131 (320)
125 3d4r_A Domain of unknown funct 50.3 17 0.00058 31.2 4.4 41 116-167 95-135 (169)
126 2tpt_A Thymidine phosphorylase 50.2 13 0.00044 36.4 4.1 41 126-166 334-405 (440)
127 2dsj_A Pyrimidine-nucleoside ( 50.1 9.6 0.00033 37.2 3.2 30 101-130 364-393 (423)
128 1brw_A PYNP, protein (pyrimidi 49.8 9.5 0.00032 37.2 3.1 30 101-130 372-401 (433)
129 3h5q_A PYNP, pyrimidine-nucleo 47.2 11 0.00038 36.8 3.2 28 101-128 375-402 (436)
130 2jbm_A Nicotinate-nucleotide p 46.9 10 0.00034 35.1 2.7 22 107-128 73-94 (299)
131 3lu0_D DNA-directed RNA polyme 46.5 5.6 0.00019 44.1 1.0 18 109-126 1107-1124(1407)
132 1uou_A Thymidine phosphorylase 44.6 29 0.001 34.2 5.7 42 126-167 366-436 (474)
133 2hsi_A Putative peptidase M23; 43.7 10 0.00036 34.8 2.2 18 147-164 233-250 (282)
134 3tuf_B Stage II sporulation pr 43.5 10 0.00035 34.2 2.1 25 105-129 131-155 (245)
135 1uou_A Thymidine phosphorylase 43.2 15 0.0005 36.4 3.3 28 103-130 409-436 (474)
136 1zko_A Glycine cleavage system 42.7 25 0.00085 28.8 4.2 33 135-167 39-72 (136)
137 1qwy_A Peptidoglycan hydrolase 42.4 11 0.00039 34.9 2.2 20 146-165 239-258 (291)
138 3tuf_B Stage II sporulation pr 38.9 47 0.0016 29.8 5.8 58 100-166 98-155 (245)
139 2tpt_A Thymidine phosphorylase 37.9 14 0.00049 36.1 2.3 31 101-131 377-407 (440)
140 1hpc_A H protein of the glycin 37.4 42 0.0014 27.2 4.7 30 137-166 32-62 (131)
141 3nyy_A Putative glycyl-glycine 36.8 15 0.00052 33.1 2.1 18 147-164 183-200 (252)
142 3nyy_A Putative glycyl-glycine 34.5 64 0.0022 28.9 5.9 24 105-128 177-201 (252)
143 3c2e_A Nicotinate-nucleotide p 34.2 19 0.00065 33.1 2.4 22 107-128 69-96 (294)
144 2gu1_A Zinc peptidase; alpha/b 33.5 20 0.00069 33.6 2.5 22 146-167 284-305 (361)
145 1yw4_A Succinylglutamate desuc 31.9 9.9 0.00034 35.5 0.0 35 110-144 278-317 (341)
146 2qj8_A MLR6093 protein; struct 31.4 38 0.0013 31.1 4.0 32 133-165 258-289 (332)
147 3csq_A Morphogenesis protein 1 31.3 16 0.00055 34.1 1.4 22 108-129 250-271 (334)
148 2riq_A Poly [ADP-ribose] polym 30.6 15 0.00053 31.1 1.0 21 284-305 87-108 (160)
149 3vr4_A V-type sodium ATPase ca 29.6 86 0.0029 31.9 6.4 53 110-165 130-185 (600)
150 2auk_A DNA-directed RNA polyme 28.9 28 0.00094 30.0 2.4 20 108-127 167-186 (190)
151 4etm_A LMPTP, low molecular we 27.8 38 0.0013 28.5 3.1 32 204-239 68-99 (173)
152 1onl_A Glycine cleavage system 25.5 47 0.0016 26.8 3.0 30 138-167 33-63 (128)
153 1jf8_A Arsenate reductase; ptp 25.0 53 0.0018 26.1 3.3 31 204-238 44-74 (131)
154 2lmc_B DNA-directed RNA polyme 24.9 35 0.0012 25.8 2.0 36 123-161 46-82 (84)
155 3a7l_A H-protein, glycine clea 24.8 49 0.0017 26.6 3.0 31 137-167 33-64 (128)
156 1qwy_A Peptidoglycan hydrolase 24.4 1.1E+02 0.0039 28.1 5.8 24 106-129 236-259 (291)
157 3rh0_A Arsenate reductase; oxi 22.0 59 0.002 26.7 3.1 33 203-239 61-93 (148)
158 2gu1_A Zinc peptidase; alpha/b 22.0 1.5E+02 0.005 27.6 6.2 23 107-129 282-304 (361)
159 2kng_A Protein LSR2; DNA-bindi 21.6 1E+02 0.0035 21.6 3.7 32 205-242 15-46 (55)
160 2fek_A Low molecular weight pr 20.4 67 0.0023 26.8 3.1 31 204-238 65-95 (167)
No 1
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=99.96 E-value=4.4e-31 Score=240.82 Aligned_cols=155 Identities=21% Similarity=0.327 Sum_probs=39.1
Q ss_pred eEEEeecCCCCCCceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCe-eecCceEEEEecCC
Q 021956 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNI-VKVGETLLKLVVGD 167 (305)
Q Consensus 89 ~~~i~lP~lges~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~-V~vG~~La~i~~~~ 167 (305)
.++|+||+||++|++|+|.+|+|++||.|++||+||+||+||++++|+++++|+|.++++++|+. |.+|++|+.|+.++
T Consensus 3 ~~ei~mP~lGesm~eG~I~~w~vk~Gd~V~~Gd~L~~iEtdK~~~ei~Ap~~G~v~~i~v~~G~~~V~~G~~l~~i~~~~ 82 (229)
T 1zy8_K 3 PIKILMPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVEEG 82 (229)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeEecCCCCCCCCcEEEEEEecCCCCEeCCCCEEEEEecCCceeEEecCCCeEEEEEEecCCCeeecCCCEEEEEeccC
Confidence 46899999999999999999999999999999999999999999999999999999999999996 99999999997543
Q ss_pred CCCCC---CCC--CCCCCCCCCCCC-CCCCC--CCC----CCCCCCcccChHHHHHHHHhCCCccccccCCCCCceehHH
Q 021956 168 SAVPT---PSS--DVLESVKPPGSE-NSPDS--KLN----KDTVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKED 235 (305)
Q Consensus 168 ~~~~~---~~~--~~~~~~~~~~~~-~~~~~--~~~----~~~~~~~~AsPaaRklA~e~gIDLs~V~GTG~~GRItkeD 235 (305)
+.... ... ............ ...+. ... ......++++|++|+||+|+||||+.|.|||++|||+|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~vRklAre~gVDL~~V~GTGp~GRItk~D 162 (229)
T 1zy8_K 83 EDWKHVEIPKDVGPPPPVSKPSEPRPSPEPQISIPVKKEHIPGTLRFRLSPAARNILEKHSLDASQGTATGPRGIFTKED 162 (229)
T ss_dssp -----------------------------------------------CBCHHHHHHHHHTTCCSSSSCCCSTTSCBCHHH
T ss_pred ccccccccccccccccccccCCCcccccccccCCCcccccccccccccCChHHHHHHHHcCCCccccCCCCCCCceehHH
Confidence 21110 000 000000000000 00000 000 0011246789999999999999999999999999999999
Q ss_pred HHHHHHhc
Q 021956 236 VLKYAVQK 243 (305)
Q Consensus 236 V~~~~~~~ 243 (305)
|++|++.+
T Consensus 163 V~~~~~~~ 170 (229)
T 1zy8_K 163 ALKLVQLK 170 (229)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhh
Confidence 99998754
No 2
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=99.96 E-value=2.2e-31 Score=262.19 Aligned_cols=152 Identities=38% Similarity=0.564 Sum_probs=38.9
Q ss_pred EEEeecCCCCCCceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecCCCC
Q 021956 90 VDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVGDSA 169 (305)
Q Consensus 90 ~~i~lP~lges~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~~~~ 169 (305)
++|+||+||++|++|+|.+|+|++||.|++||+||+||+||++++|+||++|+|.++++++|+.|.+|++|+.|+.+++.
T Consensus 3 ~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~~vEt~K~~~~i~ap~~G~v~~i~v~~G~~V~~G~~l~~i~~~~~~ 82 (428)
T 3dva_I 3 FEFKLPDIGEGIHEGEIVKWFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPEGTVATVGQTLITLDAPGYE 82 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeEEcCCCCCCCccEEEEEEEcCCCCEECCCCEEEEEEeCCeeEEEecCCCeEEEEEEeCCCCEeCCCCEEEEEecCCcc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999875433
Q ss_pred CCCCC--C--CC---CCCCCCCCCC---CCCCC--C--CCCCCCCCcccChHHHHHHHHhCCCccccccCCCCCceehHH
Q 021956 170 VPTPS--S--DV---LESVKPPGSE---NSPDS--K--LNKDTVGGVLATPTVRNLAKLYGINLYDVDATGKDGRVLKED 235 (305)
Q Consensus 170 ~~~~~--~--~~---~~~~~~~~~~---~~~~~--~--~~~~~~~~~~AsPaaRklA~e~gIDLs~V~GTG~~GRItkeD 235 (305)
..... . .+ +......... ...+. . ........+++||++|+||+|+||||+.|+|||++|||+|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~~R~lA~e~gvdl~~v~gtG~~GrI~k~D 162 (428)
T 3dva_I 83 NMTFKGQEQEEAKKEEKTETVSKEEKVDAVAPNAPAAEAEAGPNRRVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKED 162 (428)
T ss_dssp ---------------------------------------------CCCCCHHHHHHHHHTTCCGGGSCCCSTTSCCCTTT
T ss_pred ccccccccccccccCCCcccCCccccccCCCccccccccccccccccccCHHHHHHHHHcCCCHHHCCCCCCCCceeHHH
Confidence 21110 0 00 0000000000 00000 0 000112346899999999999999999999999999999999
Q ss_pred HHHHHH
Q 021956 236 VLKYAV 241 (305)
Q Consensus 236 V~~~~~ 241 (305)
|++|+.
T Consensus 163 V~~~~~ 168 (428)
T 3dva_I 163 IDAFLA 168 (428)
T ss_dssp TTTTSC
T ss_pred HHHHhh
Confidence 999974
No 3
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=99.75 E-value=6.5e-18 Score=131.16 Aligned_cols=79 Identities=24% Similarity=0.355 Sum_probs=75.9
Q ss_pred eEEEeecCCCCCCceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCC-eeecCceEEEEecCC
Q 021956 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGN-IVKVGETLLKLVVGD 167 (305)
Q Consensus 89 ~~~i~lP~lges~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd-~V~vG~~La~i~~~~ 167 (305)
.++|+||++|+++.+|+|.+|+|++||.|++||+|++||+||+..+|+||++|+|.++++++|+ .|..|++|+.|...+
T Consensus 5 ~~~i~~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~~V~~G~~l~~i~~~~ 84 (87)
T 3crk_C 5 HMQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDXATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEKE 84 (87)
T ss_dssp EEEEECCCSSTTCCEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCCEETTCEEEEEESSS
T ss_pred ceEEeCCCCCCCCCcEEEEEEEcCCCCEEcCCCEEEEEECCcccceeecCcCcEEEEEEECCCCeEECCCCEEEEEEccc
Confidence 5789999999999999999999999999999999999999999999999999999999999999 899999999998643
No 4
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=1.1e-17 Score=133.45 Aligned_cols=80 Identities=20% Similarity=0.441 Sum_probs=76.7
Q ss_pred eEEEeecCCCCCCceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCee-ecCceEEEEecCC
Q 021956 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIV-KVGETLLKLVVGD 167 (305)
Q Consensus 89 ~~~i~lP~lges~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V-~vG~~La~i~~~~ 167 (305)
.++|+||++|+++.+|+|.+|+|++||.|++||+||+||+||+..+|+||++|+|.++++++|+.| ..|++|+.|...+
T Consensus 7 ~~~i~~P~lg~~~~~G~i~~~~v~~Gd~V~~G~~L~~ie~~K~~~~i~Ap~~G~v~~i~v~~G~~Vv~~G~~l~~i~~~~ 86 (98)
T 2dnc_A 7 GIKILMPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVEEG 86 (98)
T ss_dssp CEEEECCCCSTTCSEECEEEESSCTTCEECTTSEEEEEECSSCEEEEECSSCEEEEECSSCTTCCCEESSCEEEEEECTT
T ss_pred cEEEECCCCCCCCccEEEEEEEcCCCCEeCCCCEEEEEEcccceeEEeCCCCEEEEEEEeCCCCEEcCCCCEEEEEecCC
Confidence 578999999999999999999999999999999999999999999999999999999999999998 9999999998754
Q ss_pred C
Q 021956 168 S 168 (305)
Q Consensus 168 ~ 168 (305)
+
T Consensus 87 ~ 87 (98)
T 2dnc_A 87 E 87 (98)
T ss_dssp S
T ss_pred C
Confidence 3
No 5
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=99.75 E-value=7e-18 Score=133.10 Aligned_cols=80 Identities=40% Similarity=0.741 Sum_probs=76.7
Q ss_pred eEEEeecCCCCCCceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecCCC
Q 021956 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVGDS 168 (305)
Q Consensus 89 ~~~i~lP~lges~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~~~ 168 (305)
+++|+||++|+++.+|+|.+|+|++||.|++||+|++||++|+..+|+||++|+|.++++++|+.|..|++|+.|+..+.
T Consensus 4 ~~~i~~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~K~~~~i~Ap~~G~V~~i~v~~G~~V~~G~~l~~i~~~~~ 83 (93)
T 1k8m_A 4 VVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLDDIAYVGKPLVDIETEAL 83 (93)
T ss_dssp CEEEECCSSCTTSCCEEEEEECCCTTCEECSSSCCEEEECSSCEEECCCSSCEEEEEECCCSSCEECTTSEEEEEECSCC
T ss_pred ceEEEcCCCCCCCCCEEEEEEEcCCcCEECCCCEEEEEEcCCcEEEEEcCCCEEEEEEEcCCCCEeCCCCEEEEEecCCC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999986443
No 6
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=99.74 E-value=1.3e-17 Score=139.50 Aligned_cols=79 Identities=25% Similarity=0.371 Sum_probs=76.3
Q ss_pred eEEEeecCCCCCCceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCC-eeecCceEEEEecCC
Q 021956 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGN-IVKVGETLLKLVVGD 167 (305)
Q Consensus 89 ~~~i~lP~lges~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd-~V~vG~~La~i~~~~ 167 (305)
.++|+||++|+++.+|+|.+|+|++||.|++||+||+||+||+.++|+||++|+|.++++++|+ .|..|++|+.|+..+
T Consensus 27 ~~~i~~P~lG~~~~~G~V~~~~V~~Gd~V~~Gd~L~~iEa~K~~~~I~Ap~~G~V~~i~v~~Gd~~V~~G~~L~~i~~~~ 106 (128)
T 1y8o_B 27 HMQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEKE 106 (128)
T ss_dssp EEEEECCCSSTTCSEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCSEETTCEEEEEESSG
T ss_pred ceeEEcCCCCCCcccEEEEEEecCCCCEecCCCEEEEEEcCcceeEEeCCCCeEEEEEEeCCCCeeecCCCEEEEEecCc
Confidence 6899999999999999999999999999999999999999999999999999999999999998 899999999998654
No 7
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=99.72 E-value=1.7e-17 Score=134.57 Aligned_cols=78 Identities=29% Similarity=0.371 Sum_probs=75.6
Q ss_pred eEEEeecCCCCCCceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCC-eeecCceEEEEecC
Q 021956 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGN-IVKVGETLLKLVVG 166 (305)
Q Consensus 89 ~~~i~lP~lges~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd-~V~vG~~La~i~~~ 166 (305)
.++|+||++|+++.+|+|.+|+|++||.|++||+||+||+||+..+|+||++|+|.++++++|+ .|..|++|+.|...
T Consensus 7 ~~~i~~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~L~~iE~~K~~~~i~Ap~~G~V~~i~v~~G~~~V~~G~~l~~i~~~ 85 (108)
T 2dne_A 7 GQKVPLPSLSPTMQAGTIARWEKKEGDKINEGDLIAEVETDKATVGFESLEECYMAKILVAEGTRDVPIGAIICITVGK 85 (108)
T ss_dssp CEEEECCCCSSSCCEEEEEECSSCTTCEECTTSEEEEEECSSCEEEEECSSSEEEEECSSCTTCCSEETTCEEEEEESC
T ss_pred ceEEecCCCCCCcccEEEEEEEcCCCCEecCCCEEEEEEcCcceeEEeCCCCEEEEEEEeCCCCeeecCCCEEEEEecC
Confidence 5789999999999999999999999999999999999999999999999999999999999999 89999999999864
No 8
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=99.71 E-value=2.4e-17 Score=125.19 Aligned_cols=76 Identities=25% Similarity=0.460 Sum_probs=73.9
Q ss_pred EEEeecCCCCCCceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEec
Q 021956 90 VDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVV 165 (305)
Q Consensus 90 ~~i~lP~lges~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~ 165 (305)
++|+||++|+++.+|+|.+|++++||.|++||+|+++|++|+..+|+||++|+|.++++++|+.|..|++|+.|..
T Consensus 2 ~~i~~P~~g~~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (79)
T 1ghj_A 2 IDIKAPTFPESIADGTVATWHKKPGEAVKRDELIVDIETDKVVMEVLAEADGVIAEIVKNEGDTVLSGELLGKLTE 77 (79)
T ss_dssp EEEECCCCCSSCSCEEECCCSSCTTSEECSSCEEEEEECSSCEEEEECSSCEEEEEESSCTTCEECTTCEEEEECC
T ss_pred cEEECCCCCCCCCCEEEEEEEcCCCCEECCCCEEEEEEccceeEEEEcCCCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 5799999999999999999999999999999999999999999999999999999999999999999999999875
No 9
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=99.68 E-value=9.5e-17 Score=121.17 Aligned_cols=75 Identities=41% Similarity=0.695 Sum_probs=73.2
Q ss_pred EEEeecCCCCCCceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEe
Q 021956 90 VDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLV 164 (305)
Q Consensus 90 ~~i~lP~lges~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~ 164 (305)
++|++|++|++..+|+|.+|++++||.|++||+|+++|++|+..+|+||++|+|.++++++|+.|..|++|+.|+
T Consensus 2 ~~i~~P~~g~~~~~G~v~~~~v~~G~~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~ 76 (77)
T 2l5t_A 2 YEFKLPDIGEGVTEGEIVRWDVKEGDMVEKDQDLVEVMTDKVTVKIPSPVRGKIVKILYREGQVVPVGSTLLQID 76 (77)
T ss_dssp EEEECCCCSSSCCCEEEEECSCCTTCEECSCCCCCEEESSSCEEECCCCCCEEEEEECCCTTCEECSCSEEEEEE
T ss_pred eEEECCCCCCCCccEEEEEEEeCCCCEECCCCEEEEEEccceEEEEECCCCEEEEEEEeCCcCEECCCCEEEEEE
Confidence 579999999999999999999999999999999999999999999999999999999999999999999999986
No 10
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.66 E-value=2.8e-16 Score=119.27 Aligned_cols=75 Identities=31% Similarity=0.475 Sum_probs=72.5
Q ss_pred EEEeecCCCCCCceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 90 VDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 90 ~~i~lP~lges~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
++|+||++|++ +|+|.+|++++||.|++||+|++||++|+..+|+||++|+|.++++++|+.|..|++|+.|...
T Consensus 3 ~~i~~p~~g~~--~G~v~~~~v~~G~~V~~G~~l~~ie~~~~~~~i~Ap~~G~v~~~~v~~G~~V~~G~~l~~i~~~ 77 (80)
T 1qjo_A 3 KEVNVPDIGGD--EVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVE 77 (80)
T ss_dssp EEECCCCCSSS--CEEEEECCCCTTCEECBTSEEEEEESSSSCEEEEBSSCEEEEECCCCTTCEECTTCCCEEEESC
T ss_pred eEEECCCCCCC--CEEEEEEEcCCCCEECCCCEEEEEEcCCceEEEeCCCCEEEEEEecCCCCEECCCCEEEEEEcc
Confidence 67999999997 9999999999999999999999999999999999999999999999999999999999999864
No 11
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.64 E-value=1.1e-17 Score=127.75 Aligned_cols=76 Identities=24% Similarity=0.420 Sum_probs=73.3
Q ss_pred EEEeecCCCCCCceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEec
Q 021956 90 VDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVV 165 (305)
Q Consensus 90 ~~i~lP~lges~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~ 165 (305)
++|+||++|+++.+|+|.+|++++||.|++||+|++||++|+..+|+||++|+|.++++++|+.|..|++|+.|..
T Consensus 3 ~~i~~P~~g~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~G~~l~~i~~ 78 (80)
T 1pmr_A 3 VDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGTTVTSRQILGRLRE 78 (80)
T ss_dssp CCEECCCCCSCCSCEECCBCCCCTTCCBSSSCCBCBCCSSSCCCCCBCCSBCCCCBCTTCTTCEECSSSEEEBCCC
T ss_pred cEEEcCCCCCCCccEEEEEEECCCcCEECCCCEEEEEEccceEEEEECCCCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999998864
No 12
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=99.63 E-value=1.5e-15 Score=115.20 Aligned_cols=75 Identities=28% Similarity=0.390 Sum_probs=71.0
Q ss_pred EEEeecCCCCCCceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecCC
Q 021956 90 VDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVGD 167 (305)
Q Consensus 90 ~~i~lP~lges~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~~ 167 (305)
++|+||++|++ + +|.+|++++||.|++||+|++||++|+..+|+||++|+|.++++++|+.|..|++|+.|...+
T Consensus 2 ~~i~~P~~g~~--~-~i~~~~v~~Gd~V~~G~~l~~le~~k~~~~i~Ap~~G~v~~~~v~~G~~V~~g~~l~~i~~~~ 76 (79)
T 1iyu_A 2 EIIRVPDIGGD--G-EVIELLVKTGDLIEVEQGLVVLESAKASMEVPSPKAGVVKSVSVKLGDKLKEGDAIIELEPAA 76 (79)
T ss_dssp EEEECCCCSSE--E-EEEEECCCTTCBCCSSSEEEEEECSSCEEEEECSSSSEEEEESCCTTCEEETTSEEEEEECCC
T ss_pred cEEECCCCCCC--C-EEEEEecCCCCEEcCCCEEEEEEccceEEEEECCCCEEEEEEEeCCCCEECCCCEEEEEecCC
Confidence 47899999996 7 999999999999999999999999999999999999999999999999999999999998643
No 13
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=99.60 E-value=5.6e-16 Score=117.99 Aligned_cols=77 Identities=21% Similarity=0.379 Sum_probs=73.3
Q ss_pred eEEEeecCCCCCCceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 89 ~~~i~lP~lges~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
+++|+||++| +...|+|.+|++++||.|++||+|+++|++|+..+|+||++|+|.++++++|+.|..|++|+.|...
T Consensus 2 ~~~i~~p~~g-~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~~ 78 (81)
T 1gjx_A 2 LVELKVPDIG-GHENVDIIAVEVNVGDTIAVDDTLITLETDKATMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEAE 78 (81)
T ss_dssp CEECCCCCCS-SCSSEEEEEECCCSSCBCCSSCCCEEEECSSCEEEECCCCSSBBCCCCCCSSCEECSSSCCCEECCS
T ss_pred cEEEEcCCCC-CCCcEEEEEEEcCCCCEECCCCEEEEEEeCCcEEEEECCCCEEEEEEecCCCCEeCCCCEEEEEEec
Confidence 5689999999 6889999999999999999999999999999999999999999999999999999999999999753
No 14
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=99.46 E-value=1e-14 Score=112.40 Aligned_cols=72 Identities=29% Similarity=0.451 Sum_probs=67.9
Q ss_pred EEEeecCCCCCCceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecCC
Q 021956 90 VDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVGD 167 (305)
Q Consensus 90 ~~i~lP~lges~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~~ 167 (305)
++|++|.+ |+|.+|++++||.|++||+|++||++|+..+|+||++|+|.++++++|+.|..|++|+.|...+
T Consensus 3 ~~i~~p~~------G~v~~~~v~~Gd~V~~G~~L~~ie~~k~~~~i~Ap~~G~V~~~~v~~G~~V~~G~~l~~i~~~~ 74 (85)
T 2k7v_A 3 KEVNVPDI------VEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVEG 74 (85)
T ss_dssp SCCCCCSC------CCCCSCCCSSSCCCCCSSSCCCCSCCCSEEEEECSSCBCCCEECSCTTCCBCTTSEEEEEECCS
T ss_pred cEEECCCe------EEEEEEEcCCCCEEcCCCEEEEEEccccEEEEECCCCEEEEEEEeCCCCEECCCCEEEEEEcCC
Confidence 35788887 8999999999999999999999999999999999999999999999999999999999998754
No 15
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=99.40 E-value=1e-12 Score=97.12 Aligned_cols=65 Identities=32% Similarity=0.417 Sum_probs=62.2
Q ss_pred ceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 102 AECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 102 ~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
.+|+|.+|++++||.|++||+|++||++|...+|+||++|+|.++++++|+.|..|++|+.|...
T Consensus 6 ~~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~i~ap~~G~v~~~~v~~G~~V~~G~~l~~i~~~ 70 (72)
T 1z6h_A 6 MAGNLWKVHVKAGDQIEKGQEVAILESMKMEIPIVADRSGIVKEVKKKEGDFVNEGDVLLELSNS 70 (72)
T ss_dssp SSEEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEESSCTTCEECTTCEEEEEGGG
T ss_pred ccEEEEEEEcCCcCEECCCCEEEEEECCccEEEEECCCCcEEEEEecCCCCEECCCCEEEEEeCC
Confidence 47999999999999999999999999999999999999999999999999999999999998753
No 16
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=99.35 E-value=1.1e-12 Score=101.07 Aligned_cols=65 Identities=18% Similarity=0.397 Sum_probs=61.8
Q ss_pred ceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecCC
Q 021956 102 AECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVGD 167 (305)
Q Consensus 102 ~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~~ 167 (305)
..|+|.+|++++||.|++||+|++||++|+..+|+||++|+|.+++ ++|+.|..|++|+.|...+
T Consensus 12 ~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~-~~G~~V~~G~~l~~i~~~~ 76 (84)
T 2kcc_A 12 SAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVKYIK-RPGAVLEAGCVVARLELDD 76 (84)
T ss_dssp SSCCEEEESSCTTEEECTTCEEEEEECSSCEEEEECSSSEEEEECS-CTTCCCCTTCCCEEEECSC
T ss_pred CCEEEEEEECCCCCEECCCCEEEEEEecceeEEEECCCCEEEEEEc-CCCCEECCCCEEEEEeCCC
Confidence 4799999999999999999999999999999999999999999999 9999999999999997643
No 17
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=99.32 E-value=4.5e-13 Score=105.44 Aligned_cols=76 Identities=21% Similarity=0.312 Sum_probs=28.7
Q ss_pred eEEEeecCCCCCC----ceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEe
Q 021956 89 IVDVPLAQTGEGI----AECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLV 164 (305)
Q Consensus 89 ~~~i~lP~lges~----~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~ 164 (305)
...|++|+..+.. ..|+|.+|++++||.|++||+|++||++|+..+|+||++|+|.++++++|+.|..|++|+.|+
T Consensus 15 ~~~v~~~~~~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~k~~~~i~AP~~G~V~~~~v~~G~~V~~G~~L~~ie 94 (94)
T 2jku_A 15 TENLYFQSMTSSVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEAMKMQNSMTAGKTGTVKSVHCQAGDTVGEGDLLVELE 94 (94)
T ss_dssp ---------CCCCCCCSSSCEEEEECCCTTCCCCTTCCCEEEEC------------------------------------
T ss_pred CEEEEcCCCCceEEECCCCEEEEEEECCCCCEEcCCCEEEEEecccccEEEECCCCEEEEEEcCCCcCEECCCCEEEEEC
Confidence 4568888887653 589999999999999999999999999999999999999999999999999999999999874
No 18
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=4.4e-12 Score=100.62 Aligned_cols=64 Identities=17% Similarity=0.402 Sum_probs=61.2
Q ss_pred ceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 102 AECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 102 ~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
..|+|.+|++++||.|++||+|+++|++|+..+|+||++|+|. +++++|+.|..|++|+.|...
T Consensus 24 ~~G~v~~~~v~~Gd~V~~Gq~L~~le~~k~~~~i~Ap~~G~V~-~~v~~G~~V~~G~~l~~i~~~ 87 (100)
T 2dn8_A 24 SAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVK-YIKRPGAVLEAGCVVARLELD 87 (100)
T ss_dssp SCEEEEEESSCTTEEECTTCEEEEEEETTEEEEEECSSSEEEE-ECSCTTCEECSSCEEEEECCS
T ss_pred CCEEEEEEEcCCcCEECCCCEEEEEEecceEEEEEcCCCEEEE-EEeCCCCEECCCCEEEEEEcC
Confidence 4799999999999999999999999999999999999999999 999999999999999999754
No 19
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=99.31 E-value=7.6e-12 Score=92.60 Aligned_cols=63 Identities=29% Similarity=0.381 Sum_probs=60.5
Q ss_pred ceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEe
Q 021956 102 AECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLV 164 (305)
Q Consensus 102 ~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~ 164 (305)
..|+|.+|++++||.|++||+|++++++|...+|+||++|+|.++++++|+.|..|++|+.|+
T Consensus 12 ~~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~ 74 (74)
T 2d5d_A 12 MPGKVLRVLVRVGDRVRVGQGLLVLEAMKMENEIPSPRDGVVKRILVKEGEAVDTGQPLIELG 74 (74)
T ss_dssp SCEEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSSEEEEEECCCTTCEECTTCEEEEEC
T ss_pred CCEEEEEEEcCCCCEeCCCCEEEEEecccceEEEeCCCCEEEEEEEcCCcCEECCCCEEEEEC
Confidence 479999999999999999999999999999999999999999999999999999999999874
No 20
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=99.30 E-value=7.6e-12 Score=93.68 Aligned_cols=63 Identities=29% Similarity=0.372 Sum_probs=60.5
Q ss_pred ceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEe
Q 021956 102 AECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLV 164 (305)
Q Consensus 102 ~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~ 164 (305)
.+|+|.+|++++||.|++||+|++|+++|+..+|+||++|+|.++++++|+.|..|++|+.|+
T Consensus 15 ~~G~v~~~~v~~G~~V~~G~~L~~l~~~~~~~~i~Ap~~G~v~~~~~~~G~~v~~G~~l~~i~ 77 (77)
T 1dcz_A 15 LAGTVSKILVKEGDTVKAGQTVLVLEAMKMETEINAPTDGKVEKVLVKERDAVQGGQGLIKIG 77 (77)
T ss_dssp SSCEEEEECCCTTCEECTTSEEEEEEETTEEEEEECSSSEEEEEECCCTTCBCCBTSEEEEEC
T ss_pred CCEEEEEEEcCCcCEEcCCCEEEEEEccceeEEEECCCCEEEEEEecCCcCEECCCCEEEEEC
Confidence 369999999999999999999999999999999999999999999999999999999999874
No 21
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=99.28 E-value=1.3e-11 Score=97.81 Aligned_cols=67 Identities=22% Similarity=0.260 Sum_probs=63.4
Q ss_pred ceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecCCC
Q 021956 102 AECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVGDS 168 (305)
Q Consensus 102 ~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~~~ 168 (305)
..|+|.+|++++||.|++||+|++|+++|+..+|+||++|+|.++++++|+.|..|++|+.|...+.
T Consensus 21 ~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~~~~~~i~AP~~G~V~~~~v~~G~~V~~G~~L~~i~~~~~ 87 (99)
T 2ejm_A 21 MTGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKSPKDGTVKKVFYREGAQANRHTPLVEFEEEES 87 (99)
T ss_dssp SSEEEEEECCCTTEEECSSCEEEEEESSSSEEEEECSSCEEEEEESCCTTEEECTTCBCEEECCCCS
T ss_pred CCEEEEEEECCCCCEECCCCEEEEEEccceeEEEECCCCeEEEEEEcCCCCEECCCCEEEEEECCCc
Confidence 4799999999999999999999999999999999999999999999999999999999999986543
No 22
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=99.27 E-value=8.1e-12 Score=94.59 Aligned_cols=62 Identities=23% Similarity=0.364 Sum_probs=57.7
Q ss_pred eeEEEE-------EEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEe
Q 021956 103 ECELLK-------WFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLV 164 (305)
Q Consensus 103 eG~I~~-------w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~ 164 (305)
.|+|.+ |++++||.|++||+|++||++|+..+|+||++|+|.++++++|+.|..|++|+.|+
T Consensus 12 ~G~v~~~~~~~~~~~v~~G~~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~V~~G~~L~~i~ 80 (80)
T 1bdo_A 12 VGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE 80 (80)
T ss_dssp SEEEESSSSTTSCCSCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEECSCTTCEECTTCEEEEEC
T ss_pred CeEEEEecccCcccccCCcCEECCCCEEEEEEeccEEEEEECCCCEEEEEEEcCCCCEECCCCEEEEEC
Confidence 356655 59999999999999999999999999999999999999999999999999999874
No 23
>2eq9_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 2.09A {Thermus thermophilus}
Probab=99.22 E-value=7.3e-12 Score=84.35 Aligned_cols=38 Identities=47% Similarity=0.665 Sum_probs=36.6
Q ss_pred ccChHHHHHHHHhCCCccccccCCCCCceehHHHHHHH
Q 021956 203 LATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYA 240 (305)
Q Consensus 203 ~AsPaaRklA~e~gIDLs~V~GTG~~GRItkeDV~~~~ 240 (305)
+++|++|+||+|+|||++.|.|||++|||+++||++|+
T Consensus 2 ~asP~ar~la~e~gidl~~v~gtG~~gri~k~Dv~~~~ 39 (41)
T 2eq9_C 2 LAVPAARKLARELGIPIEEVPGSGPLGRVRVEDVRAYA 39 (41)
T ss_dssp CBCHHHHHHHHHTTCCGGGSCCCSTTCCBCHHHHHHHH
T ss_pred CCChHHHHHHHHcCCChhhcCCCCCCCcccHHHHHHHh
Confidence 57999999999999999999999999999999999987
No 24
>2eq8_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 1.94A {Thermus thermophilus}
Probab=99.20 E-value=1.1e-11 Score=82.97 Aligned_cols=38 Identities=39% Similarity=0.643 Sum_probs=36.2
Q ss_pred ccChHHHHHHHHhCCCccccccCCCCCceehHHHHHHH
Q 021956 203 LATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYA 240 (305)
Q Consensus 203 ~AsPaaRklA~e~gIDLs~V~GTG~~GRItkeDV~~~~ 240 (305)
+++|++|++|+|+|||++.|.|||++|||+++||++|+
T Consensus 1 ~asP~ar~la~e~gidl~~v~gtG~~gri~k~Dv~~~~ 38 (40)
T 2eq8_C 1 PAAPSIRRLARELGVDLTRLRGTGLAGRITEEDVRRAA 38 (40)
T ss_dssp CCCHHHHHHHHHHTCCGGGCCCCSTTSCCCHHHHHHHH
T ss_pred CCChHHHHHHHHhCCChhhcCCCCCCCceeHHHHHHHh
Confidence 36899999999999999999999999999999999986
No 25
>2eq7_C 2-oxoglutarate dehydrogenase E2 component; protein-protein complex, oxidoreductase; HET: FAD NAD; 1.80A {Thermus thermophilus}
Probab=99.17 E-value=7.9e-12 Score=83.74 Aligned_cols=38 Identities=39% Similarity=0.621 Sum_probs=35.2
Q ss_pred ccChHHHHHHHHhCCCccccccCCCCCceehHHHHHHH
Q 021956 203 LATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYA 240 (305)
Q Consensus 203 ~AsPaaRklA~e~gIDLs~V~GTG~~GRItkeDV~~~~ 240 (305)
+++|++|+||+|+|||++.|.|||++|||+++||++|+
T Consensus 1 ~asP~ar~la~e~gidl~~v~gtG~~gri~k~Dv~~~~ 38 (40)
T 2eq7_C 1 LAMPAAERLMQEKGVSPAEVQGTGLGGRILKEDVMRHL 38 (40)
T ss_dssp CCCHHHHHHHHHTTCCTTTSCCCSSSSCCCHHHHTTC-
T ss_pred CCCcHHHHHHHHhCCChhhcCCCCCCCcccHHHHHHHh
Confidence 36899999999999999999999999999999998875
No 26
>3rnm_E Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex,...; protein-protein interaction, redox protein; HET: FAD NHE; 2.40A {Homo sapiens} SCOP: a.9.1.0 PDB: 1zwv_A
Probab=99.16 E-value=1.7e-11 Score=89.16 Aligned_cols=42 Identities=55% Similarity=0.791 Sum_probs=39.0
Q ss_pred CcccChHHHHHHHHhCCCccccccCCCCCceehHHHHHHHHh
Q 021956 201 GVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQ 242 (305)
Q Consensus 201 ~~~AsPaaRklA~e~gIDLs~V~GTG~~GRItkeDV~~~~~~ 242 (305)
.++++|++|+||+|+||||+.|+|||++|||+++||++|+..
T Consensus 7 ~v~aSPaaRrlA~e~gIdl~~V~GTG~~GRItk~DV~~~~~~ 48 (58)
T 3rnm_E 7 KTLATPAVRNLAMENNIKLSEVVGSGKDGRILKEDILNYLEK 48 (58)
T ss_dssp -CCCCHHHHHHHHHTTCCGGGCCCCSGGGCCCHHHHHHHHHH
T ss_pred CcCcCHHHHHHHHHcCCCHHHCCCCCCCCceeHHHHHHHHhh
Confidence 467899999999999999999999999999999999999854
No 27
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=99.15 E-value=5.2e-11 Score=123.06 Aligned_cols=62 Identities=26% Similarity=0.389 Sum_probs=60.5
Q ss_pred eeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEe
Q 021956 103 ECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLV 164 (305)
Q Consensus 103 eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~ 164 (305)
.|+|.+|+|++||.|++||+|++||+||++++|+||.+|+|.++++++|+.|..|++|+.|+
T Consensus 620 ~G~v~~~~v~~Gd~V~~g~~l~~iEamKm~~~i~ap~~G~v~~i~~~~G~~v~~g~~l~~i~ 681 (681)
T 3n6r_A 620 PGLIVKVDVEVGQEVQEGQALCTIEAMKMENILRAEKKGVVAKINASAGNSLAVDDVIMEFE 681 (681)
T ss_dssp CEEEEEECCCTTCEECTTCEEEEEECSSCEEEEECSSSEEEEEECCCTTCEECTTCEEEEEC
T ss_pred cEEEEEEEeCCCCEEcCCCEEEEEEecCceeEEECCCCeEEEEEEeCCcCEeCCCCEEEEEC
Confidence 69999999999999999999999999999999999999999999999999999999999984
No 28
>1w4i_A Pyruvate dehydrogenase E2; transferase, peripheral-subunit binding domain, ultrafast folding, homologues,; NMR {Pyrobaculum aerophilum} PDB: 1w4j_A 1w4k_A
Probab=99.15 E-value=3.8e-11 Score=88.27 Aligned_cols=45 Identities=42% Similarity=0.585 Sum_probs=40.7
Q ss_pred CcccChHHHHHHHHhCCCccccccCCCCCceehHHHHHHHHhcCC
Q 021956 201 GVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQKGA 245 (305)
Q Consensus 201 ~~~AsPaaRklA~e~gIDLs~V~GTG~~GRItkeDV~~~~~~~~~ 245 (305)
.++++|++|+||+++||||+.|.|||++|||+++||++|+...+.
T Consensus 4 ~~~asPaaRklA~e~gidl~~V~gtG~~GrItk~DV~~~~~~~~~ 48 (62)
T 1w4i_A 4 EVAAMPAARRLAKELGIDLSKVKGTGPGGVITVEDVKRYAEETAK 48 (62)
T ss_dssp SSEECHHHHHHHHHHTCCGGGSCCCSTTSEECHHHHHHHHHHHHS
T ss_pred cccCChHHHHHHHHhCCChhhcCCCCCCCcccHHHHHHHHhccCC
Confidence 356899999999999999999999999999999999999875443
No 29
>2coo_A Lipoamide acyltransferase component of branched- chain alpha-keto acid dehydrogenase...; E3_binding domain; NMR {Homo sapiens}
Probab=99.11 E-value=1.2e-10 Score=87.61 Aligned_cols=43 Identities=51% Similarity=0.757 Sum_probs=39.9
Q ss_pred CcccChHHHHHHHHhCCCccccccCCCCCceehHHHHHHHHhc
Q 021956 201 GVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQK 243 (305)
Q Consensus 201 ~~~AsPaaRklA~e~gIDLs~V~GTG~~GRItkeDV~~~~~~~ 243 (305)
.++++|++|+||+|+||||+.|.|||++|||+++||++|+...
T Consensus 15 ~~~aSPaaRklA~e~gidl~~V~GTG~~GRItk~DV~~~~~~~ 57 (70)
T 2coo_A 15 KTLATPAVRRLAMENNIKLSEVVGSGKDGRILKEDILNYLEKQ 57 (70)
T ss_dssp SCCSCHHHHHHHHHHTCCGGGSCCCSTTSCCCHHHHHHHHHHH
T ss_pred ccccCcHHHHHHHHhCCCccccCCCCCCCceeHHHHHHHHhcc
Confidence 4568999999999999999999999999999999999998654
No 30
>1w85_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: a.9.1.1 PDB: 1w88_I* 1w4g_A 1w4e_A 1w4f_A 2pdd_A 2pde_A 1ebd_C*
Probab=99.11 E-value=3.3e-11 Score=84.35 Aligned_cols=41 Identities=44% Similarity=0.702 Sum_probs=38.3
Q ss_pred CcccChHHHHHHHHhCCCccccccCCCCCceehHHHHHHHH
Q 021956 201 GVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAV 241 (305)
Q Consensus 201 ~~~AsPaaRklA~e~gIDLs~V~GTG~~GRItkeDV~~~~~ 241 (305)
.++++|++|+||+|+||||+.|.|||++|||+++||++|+.
T Consensus 6 ~~~asP~ar~la~e~gidl~~v~gtG~~Gri~k~Dv~~~~~ 46 (49)
T 1w85_I 6 RVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLA 46 (49)
T ss_dssp CCCCCHHHHHHHHHTTCCTTTSCCCSGGGCCCHHHHHHHHC
T ss_pred cccCChHHHHHHHHcCCCccccCCCCCCCcccHHHHHHHHh
Confidence 35689999999999999999999999999999999999984
No 31
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=99.07 E-value=1.7e-10 Score=126.14 Aligned_cols=61 Identities=21% Similarity=0.361 Sum_probs=59.8
Q ss_pred eeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEE
Q 021956 103 ECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKL 163 (305)
Q Consensus 103 eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i 163 (305)
.|+|.+|+|++||.|++||+|++||+||++++|+||.+|+|.++++++|+.|.+|++|+.|
T Consensus 1175 ~G~v~~~~v~~Gd~V~~g~~l~~iEamK~~~~v~ap~~G~v~~i~v~~G~~V~~G~~l~~i 1235 (1236)
T 3va7_A 1175 TGRFWKPVAAVGDHVEAGDGVIIIEAMKTEMVVGATKSGKVYKILHKNGDMVEAGDLVAVI 1235 (1236)
T ss_dssp CEEEEEESSCTTCEECSSCEEEEEEETTEEEEEECSSCEEEEEECCCTTCEECTTCEEEEE
T ss_pred cEEEEEEEcCCCCEECCCCEEEEEEecCcceeEecCCCeEEEEEEeCCcCEeCCCCEEEEe
Confidence 5999999999999999999999999999999999999999999999999999999999987
No 32
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=99.06 E-value=2.2e-10 Score=124.54 Aligned_cols=64 Identities=19% Similarity=0.330 Sum_probs=61.1
Q ss_pred eeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 103 ECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 103 eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
.|+|.+|+|++||.|++||+|++||+||++.+|+||.+|+|.++++++|+.|..|++|+.|+.+
T Consensus 1085 ~G~v~~~~v~~Gd~V~~G~~l~~ieamK~~~~i~ap~~G~v~~i~v~~G~~V~~g~~l~~i~~~ 1148 (1150)
T 3hbl_A 1085 PGSVTEVKVSVGETVKANQPLLITEAMKMETTIQAPFDGVIKQVTVNNGDTIATGDLLIEIEKA 1148 (1150)
T ss_dssp SEEEEEECCCTTCEECTTCEEEEEESSSCEEEEECSSSEEEEEECCCTTCEECTTBEEEEEC--
T ss_pred eEEEEEEEeCCCCEECCCCEEEEEEeccceeEEecCCCeEEEEEEeCCCCEeCCCCEEEEEecC
Confidence 6999999999999999999999999999999999999999999999999999999999999753
No 33
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=99.04 E-value=1.9e-11 Score=126.14 Aligned_cols=64 Identities=22% Similarity=0.332 Sum_probs=0.0
Q ss_pred eeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 103 ECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 103 eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
.|+|.+|+|++||.|++||+|++||+||++++|+||.+|+|.++++++|+.|.+|++|+.|+.+
T Consensus 610 ~G~v~~~~v~~Gd~V~~g~~l~~iEamK~~~~i~ap~~G~v~~i~~~~G~~v~~g~~l~~i~~~ 673 (675)
T 3u9t_A 610 NGSIVRVLVEPGQTVEAGATLVVLEAMKMEHSIRAPHAGVVKALYCSEGELVEEGTPLVELDEN 673 (675)
T ss_dssp ----------------------------------------------------------------
T ss_pred CEEEEEEEeCCCCEEcCCCEEEEEEecceeEEEECCCCeEEEEEEeCCcCCcCCCCEEEEEecC
Confidence 7999999999999999999999999999999999999999999999999999999999999754
No 34
>1bal_A Dihydrolipoamide succinyltransferase; glycolysis; NMR {Escherichia coli} SCOP: a.9.1.1 PDB: 1bbl_A 1w4h_A 2wav_A 2wxc_A 2btg_A 2bth_A 2cyu_A
Probab=99.01 E-value=6.1e-11 Score=83.81 Aligned_cols=40 Identities=28% Similarity=0.394 Sum_probs=37.1
Q ss_pred CcccChHHHHHHHHhCCCccccccCCCCCceehHHHHHHH
Q 021956 201 GVLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYA 240 (305)
Q Consensus 201 ~~~AsPaaRklA~e~gIDLs~V~GTG~~GRItkeDV~~~~ 240 (305)
..+++|++|+||+|+||||+.|.|||++|||+++||++|+
T Consensus 9 ~~~asP~aR~lA~e~gidl~~V~gtG~~GrI~k~DV~~~~ 48 (51)
T 1bal_A 9 NDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHL 48 (51)
T ss_dssp SCCCCGGGTTHHHHTTCCTTSSCCCSTTSCCCHHHHTTTS
T ss_pred CCCCChHHHHHHHHcCCCccccCCCCCCCcccHHHHHHHh
Confidence 4568999999999999999999999999999999998775
No 35
>2f60_K Pyruvate dehydrogenase protein X component; protein-binding protein, E3BD, protein binding; 1.55A {Homo sapiens} PDB: 2f5z_K
Probab=99.00 E-value=1.6e-10 Score=85.55 Aligned_cols=41 Identities=29% Similarity=0.349 Sum_probs=38.6
Q ss_pred cccChHHHHHHHHhCCCccccccCCCCCceehHHHHHHHHh
Q 021956 202 VLATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQ 242 (305)
Q Consensus 202 ~~AsPaaRklA~e~gIDLs~V~GTG~~GRItkeDV~~~~~~ 242 (305)
++++|++|+||+|+||||+.|.|||++|||+++||++|+..
T Consensus 10 ~~asPaaRklA~e~gidl~~V~GTG~~GRItk~DV~~~~~~ 50 (64)
T 2f60_K 10 FRLSPAARNILEKHSLDASQGTATGPRGIFTKEDALKLVQL 50 (64)
T ss_dssp HHBCHHHHHHHHHTTCCGGGSCCCSGGGCBCHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHcCCChhhcCCCCCCCcccHHHHHHHHhc
Confidence 46899999999999999999999999999999999999864
No 36
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=98.89 E-value=2.1e-09 Score=86.61 Aligned_cols=66 Identities=21% Similarity=0.388 Sum_probs=60.0
Q ss_pred ceeEEEEEEccCCCEEecCCeEEEEecCcee-----------------------------eEEecCCCcEEEEEeeCCCC
Q 021956 102 AECELLKWFVKEGDEIEEFQPLCAVQSDKAT-----------------------------IEITSRYKGKVAQLLHAPGN 152 (305)
Q Consensus 102 ~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~-----------------------------~eI~Ap~~Gvv~~i~v~~Gd 152 (305)
..|+|.+|+|++||.|++||+|++|++.++. ..|+||++|+|..+.+++|+
T Consensus 8 ~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~a~~~~~r~~~L~~~~~~s~~~~~~~~~~~~~~~i~AP~~G~V~~~~~~~G~ 87 (116)
T 2k32_A 8 VSGVIVNKLFKAGDKVKKGQTLFIIEQDQASKDFNRSKALFSQSAISQKEYDSSLATLDHTEIKAPFDGTIGDALVNIGD 87 (116)
T ss_dssp SCEEEEEECSCTTSEECTTCEEEEEECTTTSHHHHHHHHHTGGGCCSTTTTTHHHHTTTEEEEECSSSEEECCCSCCTTC
T ss_pred CCEEEEEEECCCcCEECCCCEEEEECHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHhhcCCEEEcCCCEEEEEEECCCCC
Confidence 4799999999999999999999999987554 48999999999999999999
Q ss_pred eeecC-ceEEEEecCC
Q 021956 153 IVKVG-ETLLKLVVGD 167 (305)
Q Consensus 153 ~V~vG-~~La~i~~~~ 167 (305)
.|..| ++|+.|...+
T Consensus 88 ~v~~g~~~l~~i~~~~ 103 (116)
T 2k32_A 88 YVSASTTELVRVTNLN 103 (116)
T ss_dssp EECTTTSCCEEEECSC
T ss_pred EEcCCCcEEEEEECCC
Confidence 99999 9999997643
No 37
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=98.80 E-value=1.6e-09 Score=112.64 Aligned_cols=62 Identities=19% Similarity=0.309 Sum_probs=60.1
Q ss_pred eeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEe
Q 021956 103 ECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLV 164 (305)
Q Consensus 103 eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~ 164 (305)
.|+|.+|+|++||.|++||+|++||+||+..+|.||++|+|.++++++|+.|..|++|+.|+
T Consensus 657 ~G~V~~v~V~~Gd~V~~Gq~L~~iEamKme~~I~Ap~~G~V~~i~v~~G~~V~~G~~L~~i~ 718 (718)
T 3bg3_A 657 PGKVIDIKVVAGAKVAKGQPLCVLSAMKMETVVTSPMEGTVRKVHVTKDMTLEGDDLILEIE 718 (718)
T ss_dssp CEEEEEECSCTTCCBCTTCCCEEEESSSCEEEECCCCCBCBCCCCCCSEEEECSSCEEECBC
T ss_pred CeEEEEEEeCCCCeeCCCCEEEEEecccceeEEecCCCeEEEEEecCCCCEeCCCCEEEEeC
Confidence 79999999999999999999999999999999999999999999999999999999998763
No 38
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=98.74 E-value=5.3e-09 Score=113.89 Aligned_cols=62 Identities=18% Similarity=0.282 Sum_probs=53.9
Q ss_pred eeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEe
Q 021956 103 ECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLV 164 (305)
Q Consensus 103 eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~ 164 (305)
.|+|.+|+|++||.|++||+|++||+||++.+|+||.+|+|.++++++|+.|..|++|+.|+
T Consensus 1103 ~G~v~~~~v~~Gd~V~~G~~l~~iEamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~l~~i~ 1164 (1165)
T 2qf7_A 1103 PGVISRVFVSSGQAVNAGDVLVSIEAMKMETAIHAEKDGTIAEVLVKAGDQIDAKDLLAVYG 1164 (1165)
T ss_dssp CEEEEEECCSSCCCC---CEEEEEEC---CEEEECCSSCCCCEECCCSSCEECTTBEEEEC-
T ss_pred CeEEEEEEcCCcCEeCCCCEEEEEEcccceEEEEcCCCEEEEEEEeCCCCEECCCCEEEEec
Confidence 69999999999999999999999999999999999999999999999999999999999875
No 39
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=98.74 E-value=1.4e-08 Score=85.55 Aligned_cols=72 Identities=21% Similarity=0.383 Sum_probs=60.3
Q ss_pred EEEeecCCCCCCceeEEEEEEc-cCCCEEecCCeEEEEecCceeeEEecCCCcEEEEE---eeCCCCeee---cCc-eEE
Q 021956 90 VDVPLAQTGEGIAECELLKWFV-KEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQL---LHAPGNIVK---VGE-TLL 161 (305)
Q Consensus 90 ~~i~lP~lges~~eG~I~~w~v-~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i---~v~~Gd~V~---vG~-~La 161 (305)
.++.+|.+|+ |..+.+ ++||.|++||+||+||++|+..+|.||.+|+|.++ +++.++.|. .|+ .|+
T Consensus 37 t~~a~~~lG~------i~~V~lp~vGd~V~~Gd~l~~VEs~K~~~eI~aPvsG~V~eiN~~l~~~p~~Vn~dp~g~GwL~ 110 (136)
T 1zko_A 37 TNHAQEQLGD------VVYVDLPEVGREVKKGEVVASIESVKAAADVYAPLSGKIVEVNEKLDTEPELINKDPEGEGWLF 110 (136)
T ss_dssp CHHHHHHHCS------EEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSCEEEEEECGGGGTCTTHHHHCTTTTTCCE
T ss_pred EhhhcccCCC------cEEEEecCCCCEEeCCCEEEEEEEccEeEEEecCCCeEEEEEehhhccCccCcccCCCCCeEEE
Confidence 3445666654 444444 99999999999999999999999999999999999 788999998 888 999
Q ss_pred EEecCC
Q 021956 162 KLVVGD 167 (305)
Q Consensus 162 ~i~~~~ 167 (305)
.|...+
T Consensus 111 ~i~~~~ 116 (136)
T 1zko_A 111 KMEISD 116 (136)
T ss_dssp EEEESC
T ss_pred EEEECC
Confidence 998643
No 40
>1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A*
Probab=98.29 E-value=3.9e-07 Score=76.13 Aligned_cols=71 Identities=20% Similarity=0.234 Sum_probs=54.4
Q ss_pred EEEeecCCCCCCceeEEEEEEc-cCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCC---Ceee---cCc-eEE
Q 021956 90 VDVPLAQTGEGIAECELLKWFV-KEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPG---NIVK---VGE-TLL 161 (305)
Q Consensus 90 ~~i~lP~lges~~eG~I~~w~v-~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~G---d~V~---vG~-~La 161 (305)
.++.++.+|+ |..+.+ ++||.|++||+||+||++|+..+|.||.+|+|.+++.+.+ +.|. -|+ -|+
T Consensus 28 td~a~~~lG~------i~~v~lp~~G~~V~~g~~l~~vEs~K~~~~I~aPvsG~V~evn~~l~~~P~lvn~dpy~~gWl~ 101 (131)
T 1hpc_A 28 TDHAQDHLGE------VVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTGKPGLINSSPYEDGWMI 101 (131)
T ss_dssp CHHHHHHHCS------EEEEECCCTTCEECBTSEEEEEEESSCEEEEEBSSCEEEEEECTHHHHCTTHHHHCTTTTTCCE
T ss_pred ehhhcccCCC------ceEEEecCCCCEEeCCCEEEEEEecceeEEEecCCCeEEEEEhhhhhcChhhhccCCCCCceEE
Confidence 3444555543 555555 9999999999999999999999999999999999986543 4553 344 677
Q ss_pred EEecC
Q 021956 162 KLVVG 166 (305)
Q Consensus 162 ~i~~~ 166 (305)
.|...
T Consensus 102 ~i~~~ 106 (131)
T 1hpc_A 102 KIKPT 106 (131)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 77753
No 41
>3a7l_A H-protein, glycine cleavage system H protein; lipoic acid, lipoyl, transport protein; 1.30A {Escherichia coli} PDB: 3a7a_B 3ab9_A* 3a8i_E* 3a8j_E* 3a8k_E*
Probab=98.26 E-value=9.9e-07 Score=73.40 Aligned_cols=72 Identities=15% Similarity=0.167 Sum_probs=54.7
Q ss_pred eEEEeecCCCCCCceeEEEEEE-ccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCC---CCeee---cCc-eE
Q 021956 89 IVDVPLAQTGEGIAECELLKWF-VKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP---GNIVK---VGE-TL 160 (305)
Q Consensus 89 ~~~i~lP~lges~~eG~I~~w~-v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~---Gd~V~---vG~-~L 160 (305)
+.++.++.+|+ |..+. .++||.|++||+||+||++|+..+|.||.+|+|.+++... .+.|. -|+ -|
T Consensus 28 itd~a~~~lG~------i~~v~lp~vG~~V~~g~~l~~vEs~K~~~~i~aPvsG~V~evN~~l~~~P~lvn~dpy~~gWl 101 (128)
T 3a7l_A 28 ITEHAQELLGD------MVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWI 101 (128)
T ss_dssp ECHHHHHHHCS------EEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGGTCTTHHHHCTTTTTCC
T ss_pred EehHHhccCCc------eEEEEecCCCCEEeCCCEEEEEEecceeeEEecCCCeEEEEEhhhhccChHHhccCCCCCccE
Confidence 34455666654 44443 4999999999999999999999999999999999998654 34454 454 67
Q ss_pred EEEecC
Q 021956 161 LKLVVG 166 (305)
Q Consensus 161 a~i~~~ 166 (305)
+.|...
T Consensus 102 ~~i~~~ 107 (128)
T 3a7l_A 102 FKIKAS 107 (128)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 777654
No 42
>1onl_A Glycine cleavage system H protein; hybrid barrel-sandwich structure, structural genomics, riken structural genomics/proteomics initiative; 2.50A {Thermus thermophilus} SCOP: b.84.1.1
Probab=98.21 E-value=1.5e-06 Score=72.31 Aligned_cols=72 Identities=21% Similarity=0.270 Sum_probs=54.8
Q ss_pred eEEEeecCCCCCCceeEEEEEE-ccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeC---CCCee---ecCc-eE
Q 021956 89 IVDVPLAQTGEGIAECELLKWF-VKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHA---PGNIV---KVGE-TL 160 (305)
Q Consensus 89 ~~~i~lP~lges~~eG~I~~w~-v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~---~Gd~V---~vG~-~L 160 (305)
+.++.++.+|+ |..+. .++||.|++||+||+||++|+..+|.||.+|+|.+++.. ..+.| +-|+ -|
T Consensus 27 it~~a~~~lG~------i~~v~lp~vG~~V~~g~~l~~vEs~K~~~~i~aPvsG~V~evn~~l~~~P~lvn~dpy~~gWl 100 (128)
T 1onl_A 27 ITDYAQDALGD------VVYVELPEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVNLALEKTPELVNQDPYGEGWI 100 (128)
T ss_dssp ECHHHHHHHCS------EEEEECBCTTCEECTTCEEEEEEESSBEEEEECSSSEEEEEECTHHHHCTTHHHHCTTTTTCC
T ss_pred eehHHhhcCCC------ceEEEecCCCCEEeCCCEEEEEEEcceeeEEecCCCeEEEEEhhhhccChhhhccCCCCCccE
Confidence 33445566654 44443 499999999999999999999999999999999999865 44455 4455 77
Q ss_pred EEEecC
Q 021956 161 LKLVVG 166 (305)
Q Consensus 161 a~i~~~ 166 (305)
+.|...
T Consensus 101 ~~i~~~ 106 (128)
T 1onl_A 101 FRLKPR 106 (128)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 777754
No 43
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=98.11 E-value=5e-06 Score=80.57 Aligned_cols=64 Identities=14% Similarity=0.185 Sum_probs=57.4
Q ss_pred ceeEEEEEEc-cCCCEEecCCeEEEEecC------------------------------------------------cee
Q 021956 102 AECELLKWFV-KEGDEIEEFQPLCAVQSD------------------------------------------------KAT 132 (305)
Q Consensus 102 ~eG~I~~w~v-~eGD~V~~Gd~L~eIEtd------------------------------------------------K~~ 132 (305)
.+|.|.+++| ++||.|++||+|++|++. ...
T Consensus 128 ~~G~V~~v~V~~~Gd~VkkGq~L~~ld~~~l~~aq~~~~~a~~~~~~~~~~~~a~~~l~~~~~~~~~~~~l~~~~~~~~~ 207 (413)
T 3ne5_B 128 AAGFIDKVYPLTVGDKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGMPEADIRRLIATQKIQTR 207 (413)
T ss_dssp SCEEEEEECSCCTTCEECTTCEEEEEECCSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHTSCCCE
T ss_pred cCEEEEEEEeCCCCCEEcCCCEEEEEcCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccc
Confidence 4799999998 999999999999999952 124
Q ss_pred eEEecCCCcEEEEEeeCCCCeeecCceEEEEec
Q 021956 133 IEITSRYKGKVAQLLHAPGNIVKVGETLLKLVV 165 (305)
Q Consensus 133 ~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~ 165 (305)
..|+||++|+|.++.+++|+.|..|++|+.|..
T Consensus 208 ~~I~AP~~G~V~~~~v~~G~~V~~G~~l~~I~~ 240 (413)
T 3ne5_B 208 FTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQG 240 (413)
T ss_dssp EEEECSSSEEEEECCCCTTCEECTTSCSEEEEE
T ss_pred EEEEcCCCeEEEEEEcCCCCEECCCCcEEEEeC
Confidence 579999999999999999999999999998864
No 44
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=98.08 E-value=1.5e-06 Score=78.80 Aligned_cols=65 Identities=25% Similarity=0.296 Sum_probs=56.9
Q ss_pred ceeEEEEEEccCCCEEecCCeEEEEecCc---------------------------------------------------
Q 021956 102 AECELLKWFVKEGDEIEEFQPLCAVQSDK--------------------------------------------------- 130 (305)
Q Consensus 102 ~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK--------------------------------------------------- 130 (305)
..|+|.+++|++||.|++||+|++|++..
T Consensus 29 ~~G~V~~v~v~~G~~V~kGq~L~~ld~~~~~~~l~~a~a~l~~a~a~l~~a~~~~~r~~~L~~~g~~s~~~~~~a~~~~~ 108 (277)
T 2f1m_A 29 VSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQ 108 (277)
T ss_dssp SCEEEEEECSCTTCEECTTSCSEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCHHHHHHHHHHHH
T ss_pred ccEEEEEEEcCCCCEecCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHH
Confidence 46999999999999999999999998742
Q ss_pred --------------------eeeEEecCCCcEEEEEeeCCCCeeecC--ceEEEEecC
Q 021956 131 --------------------ATIEITSRYKGKVAQLLHAPGNIVKVG--ETLLKLVVG 166 (305)
Q Consensus 131 --------------------~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG--~~La~i~~~ 166 (305)
....|+||++|+|..+.+++|+.|..| ++|+.|...
T Consensus 109 ~a~a~l~~a~a~l~~a~~~l~~~~I~AP~~G~V~~~~~~~G~~v~~g~~~~l~~i~~~ 166 (277)
T 2f1m_A 109 QANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQATALATVQQL 166 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTEECCSSCEEECCCSSCBTCEECTTCSSCSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEeEEcCCCCEEcCCCCceeEEEecC
Confidence 124699999999999999999999999 689988653
No 45
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=98.07 E-value=5.5e-06 Score=77.78 Aligned_cols=65 Identities=18% Similarity=0.222 Sum_probs=58.0
Q ss_pred ceeEEEEEEccCCCEEecCCeEEEEecCce--------------------------------------------------
Q 021956 102 AECELLKWFVKEGDEIEEFQPLCAVQSDKA-------------------------------------------------- 131 (305)
Q Consensus 102 ~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~-------------------------------------------------- 131 (305)
..|+|.+++|++||.|++||+|++|++...
T Consensus 64 ~~G~V~~v~v~~G~~V~kGq~L~~ld~~~l~~a~~~l~~a~a~l~~a~~~~~r~~~L~~~~~~s~~~~~~a~~~~~~a~a 143 (359)
T 3lnn_A 64 LAGRIVSLNKQLGDEVKAGDVLFTIDSADLAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAAS 143 (359)
T ss_dssp SCEEEEECCSCTTCEECTTCEEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSCCCCTTHHHHHHHHHHHHH
T ss_pred CCEEEEEEEcCCCCEEcCCCEEEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 479999999999999999999999997532
Q ss_pred --------------------------eeEEecCCCcEEEEEeeCCCCeeec-CceEEEEecC
Q 021956 132 --------------------------TIEITSRYKGKVAQLLHAPGNIVKV-GETLLKLVVG 166 (305)
Q Consensus 132 --------------------------~~eI~Ap~~Gvv~~i~v~~Gd~V~v-G~~La~i~~~ 166 (305)
...|+||++|+|..+.+.+|+.|.. |++|+.|...
T Consensus 144 ~l~~a~~~l~~~~~~~~~~~~~~~~~~~~i~AP~~G~V~~~~~~~G~~v~~~g~~l~~i~~~ 205 (359)
T 3lnn_A 144 ESQRADARLAQLGAKGGGTLQAGGGHILAVRSPINGRVVDLNAATGAYWNDTTASLMTVADL 205 (359)
T ss_dssp HHHHHHHHHHHHHHHHGGGBCSSTTSEEEEECSSCEEEEECCCCBTCEECCSSCCSEEEECC
T ss_pred HHHHHHHHHHHhcCCcchhhhhcccceEEEECCCCEEEEEeecCCCceeCCCCcceEEEecC
Confidence 2579999999999999999999998 9999988753
No 46
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=98.02 E-value=5.7e-06 Score=77.13 Aligned_cols=64 Identities=22% Similarity=0.300 Sum_probs=55.9
Q ss_pred ceeEEEEEEccCCCEEecCCeEEEEecCc---------------------------------------------------
Q 021956 102 AECELLKWFVKEGDEIEEFQPLCAVQSDK--------------------------------------------------- 130 (305)
Q Consensus 102 ~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK--------------------------------------------------- 130 (305)
..|+|.+++|++||.|++||+|++|++..
T Consensus 38 ~~G~V~~v~v~~G~~V~kG~~L~~ld~~~~~~~~~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~ 117 (341)
T 3fpp_A 38 VSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLD 117 (341)
T ss_dssp SCEEEEEECCCTTCEECTTCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSSSTTHHHH
T ss_pred CCcEEEEEEeCCCCEECCCCEEEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHH
Confidence 47999999999999999999999998741
Q ss_pred ----------------------------------eeeEEecCCCcEEEEEeeCCCCeeecCce---EEEEec
Q 021956 131 ----------------------------------ATIEITSRYKGKVAQLLHAPGNIVKVGET---LLKLVV 165 (305)
Q Consensus 131 ----------------------------------~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~---La~i~~ 165 (305)
....|+||++|+|..+.+.+|+.|..|+. |+.|..
T Consensus 118 ~a~~~~~~~~a~l~~~~a~l~~a~a~l~~a~~~l~~~~i~AP~~G~V~~~~~~~G~~v~~g~~~~~l~~i~~ 189 (341)
T 3fpp_A 118 NAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLAD 189 (341)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHTHHHHTTTTTTTTSSEEECSSSEEEEEESSCTTCEECCTTSCCCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCEEECCCCeEEEEEecCCCCEEecCCCCceEEEEec
Confidence 01459999999999999999999999987 887764
No 47
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=97.79 E-value=9.1e-06 Score=77.28 Aligned_cols=64 Identities=19% Similarity=0.312 Sum_probs=56.0
Q ss_pred ceeEEEEEEccCCCEEecCCeEEEEecCce--------------------------------------------------
Q 021956 102 AECELLKWFVKEGDEIEEFQPLCAVQSDKA-------------------------------------------------- 131 (305)
Q Consensus 102 ~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~-------------------------------------------------- 131 (305)
..|+|.+++|++||.|++||+|++|+....
T Consensus 50 v~G~V~~v~v~~Gd~V~kGq~L~~ld~~~~~~~l~~a~a~l~~a~~~~~R~~~L~~~g~is~~~~~~a~~~~~~a~a~l~ 129 (369)
T 1vf7_A 50 VNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRYKLLVADQAVSKQQYADANAAYLQSKAAVE 129 (369)
T ss_dssp SCEEEEECCSCSSEEECTTSEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEcCCCCEEcCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 479999999999999999999999986421
Q ss_pred -------eeEEecCCCcEEEEEeeCCCCeeecC--ceEEEEec
Q 021956 132 -------TIEITSRYKGKVAQLLHAPGNIVKVG--ETLLKLVV 165 (305)
Q Consensus 132 -------~~eI~Ap~~Gvv~~i~v~~Gd~V~vG--~~La~i~~ 165 (305)
...|+||++|+|..+.+++|+.|..| ++|+.|..
T Consensus 130 ~a~~~l~~~~I~AP~~G~V~~~~v~~G~~V~~g~g~~l~~i~~ 172 (369)
T 1vf7_A 130 QARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQ 172 (369)
T ss_dssp HHHHHHHTTEEECSSSEEECCCSSCBTCEECTTCSSCSEEEEC
T ss_pred HHHHhhcCCEEECCCCeEEEEEEcCCCCeEcCCCCceeEEEec
Confidence 24799999999999999999999995 88888864
No 48
>3klr_A Glycine cleavage system H protein; antiparallel beta sheet, beta sandwich, oxidoreductase; HET: GOL; 0.88A {Bos taurus} SCOP: b.84.1.0 PDB: 2edg_A
Probab=97.72 E-value=4.6e-05 Score=63.16 Aligned_cols=47 Identities=21% Similarity=0.287 Sum_probs=41.1
Q ss_pred eEEEEEEc-cCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCC
Q 021956 104 CELLKWFV-KEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAP 150 (305)
Q Consensus 104 G~I~~w~v-~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~ 150 (305)
|.|+-+.. ++|+.|++||.++.||++|+..+|.||.+|+|.+++..-
T Consensus 32 Gdiv~velp~vG~~v~~G~~~~~VES~K~~sdi~aPvsG~VvevN~~l 79 (125)
T 3klr_A 32 GDVVYCSLPEVGTKLNKQEEFGALESVKAASELYSPLSGEVTEINKAL 79 (125)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGG
T ss_pred CCeEEEEeCCCCCEEcCCCEEEEEEEcceeeeeecCCCEEEEEEhhhh
Confidence 55665555 789999999999999999999999999999999987553
No 49
>3mxu_A Glycine cleavage system H protein; seattle structural genomics center for infectious disease, S CAT-scratch disease, bacteremia; HET: CIT; 1.80A {Bartonella henselae}
Probab=97.59 E-value=8.8e-05 Score=62.81 Aligned_cols=46 Identities=20% Similarity=0.265 Sum_probs=40.0
Q ss_pred eEEEEEEc-cCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeC
Q 021956 104 CELLKWFV-KEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHA 149 (305)
Q Consensus 104 G~I~~w~v-~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~ 149 (305)
|.|+-+.. ++|+.|++||.++.||++|+..+|.||.+|+|.+++-.
T Consensus 54 GdIvfVelP~vG~~v~~Gd~~~~VES~Ka~sdi~sPvsG~VvevN~~ 100 (143)
T 3mxu_A 54 GDLVFIDLPQNGTKLSKGDAAAVVESVKAASDVYAPLDGEVVEINAA 100 (143)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGG
T ss_pred CCeEEEEcCCCCCEeeCCCEEEEEEecceeeeeecCcceEEEEEhhh
Confidence 55555444 89999999999999999999999999999999998754
No 50
>3tzu_A GCVH, glycine cleavage system H protein 1; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Mycobacterium marinum}
Probab=97.54 E-value=8.9e-05 Score=62.34 Aligned_cols=46 Identities=15% Similarity=0.228 Sum_probs=39.8
Q ss_pred eEEEEEEc-cCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeC
Q 021956 104 CELLKWFV-KEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHA 149 (305)
Q Consensus 104 G~I~~w~v-~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~ 149 (305)
|.|+-+.. ++|+.|++||.++.||++|+..+|.||.+|+|.+++-.
T Consensus 49 Gdiv~VelP~vG~~v~~G~~~~~VES~K~~sdi~sPvsG~VvevN~~ 95 (137)
T 3tzu_A 49 GDLVFVQLPEVGETVSAGESCGEVESTKTVSDLIAPASGQIVEVNTA 95 (137)
T ss_dssp CSEEEEECCCTTCEECTTSEEEEEEESSEEEEEECSEEEEEEEECHH
T ss_pred CCeEEEEcCCCCCEEeCCCEEEEEEecceeeeeecCcceEEEEehhh
Confidence 55555444 89999999999999999999999999999999998643
No 51
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=97.45 E-value=8.2e-06 Score=76.73 Aligned_cols=63 Identities=24% Similarity=0.356 Sum_probs=54.2
Q ss_pred ceeEEEEEEccCCCEEecCCeEEEEecCce--------------------------------------------------
Q 021956 102 AECELLKWFVKEGDEIEEFQPLCAVQSDKA-------------------------------------------------- 131 (305)
Q Consensus 102 ~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~-------------------------------------------------- 131 (305)
..|.|.+++|++||.|++||+|++|++...
T Consensus 39 ~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~~~~~l~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~ 118 (369)
T 4dk0_A 39 VSGKITKLYVKLGQQVKKGDLLAEIDSTTQINTLNTRKAALASYQAQLVARKTAYDVALSNYQRLSKLYGQKATSLDTLN 118 (369)
T ss_dssp SCSBCCEECCCTTSCCCSSCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHGGGSSCSCGGGHH
T ss_pred CCcEEEEEEECCCCEECCCCEEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHH
Confidence 469999999999999999999999987420
Q ss_pred -----------------------------------eeEEecCCCcEEEEEeeCCCCeeecCce---EEEEe
Q 021956 132 -----------------------------------TIEITSRYKGKVAQLLHAPGNIVKVGET---LLKLV 164 (305)
Q Consensus 132 -----------------------------------~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~---La~i~ 164 (305)
...|+||++|+|..+.+++|+.|..|++ |+.|.
T Consensus 119 ~a~~~~~~a~a~~~~~~~~l~~~~~~l~~a~~~l~~~~i~AP~~G~V~~~~~~~G~~v~~g~~~~~l~~i~ 189 (369)
T 4dk0_A 119 TAKATLNNAKAEMDVVQENIKQAEIEVNTAETNLGYTKITSPIDGTVISTPVSEGQTVNSNQTTPTIIKVA 189 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCCSCCSCCCBCCCCTTCBCCTTTSCCCCBBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEEeeCCCCCCccCCCCcceEEEEc
Confidence 1249999999999999999999999998 65554
No 52
>3hgb_A Glycine cleavage system H protein; ssgcid, niaid, decode, UW, SBRI, lipoyl; 1.75A {Mycobacterium tuberculosis} PDB: 3ift_A
Probab=97.29 E-value=0.00034 Score=59.91 Aligned_cols=45 Identities=16% Similarity=0.202 Sum_probs=38.8
Q ss_pred eEEEEEEc-cCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEee
Q 021956 104 CELLKWFV-KEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLH 148 (305)
Q Consensus 104 G~I~~w~v-~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v 148 (305)
|.|+-+.. ++|+.|++||.++.||+.|+..+|.||.+|+|.+++-
T Consensus 59 GdIvfVeLP~vG~~v~~Gd~~~~VESvKa~sdi~sPvsG~VvevN~ 104 (155)
T 3hgb_A 59 GDVVFVQLPVIGTAVTAGETFGEVESTKSVSDLYAPISGKVSEVNS 104 (155)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECT
T ss_pred CCeEEEEcCCCCCEEeCCCEEEEEEecceeeeeecCcceEEEEEhh
Confidence 44544433 7999999999999999999999999999999998874
No 53
>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}
Probab=96.93 E-value=0.0021 Score=60.70 Aligned_cols=61 Identities=20% Similarity=0.262 Sum_probs=50.6
Q ss_pred eeEEEEEEccCCCEEecCCeEEEEec----CceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 103 ECELLKWFVKEGDEIEEFQPLCAVQS----DKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 103 eG~I~~w~v~eGD~V~~Gd~L~eIEt----dK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
.| +.+.+++.||.|++||+|++|.. .....+|.||.+|+|... ...-.|..|+.|+.|...
T Consensus 265 ~G-l~~~~v~~Gd~V~~G~~la~I~dp~~~g~~~~~v~Ap~dGiVi~~--~~~~~V~~G~~l~~Ia~~ 329 (331)
T 3na6_A 265 DG-LFEIMIDLGEPVQEGDLVARVWSPDRTGEAPVEYRARRSGVLISR--HFPGMIKSGDCAAVIGVV 329 (331)
T ss_dssp CE-EEEESSCTTCEECTTCEEEEEECSSCSSCCCEEEECSSSEEEEEE--ECSSEECTTCEEEEEECB
T ss_pred Ce-EEEEcCCCCCEEcCCCEEEEEEcCccCCCeeEEEEcCCCEEEEEE--eCCCccCCCCEEEEEecc
Confidence 45 56778999999999999999987 346789999999999654 445788999999998753
No 54
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.92 E-value=0.00048 Score=53.94 Aligned_cols=48 Identities=19% Similarity=0.273 Sum_probs=43.3
Q ss_pred cCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 119 EFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 119 ~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
.|..+|.++.++....|.++..|+|.++++++|+.|+.|++|+.++..
T Consensus 4 ~~g~~~~~~~~~~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~le~~ 51 (100)
T 2dn8_A 4 GSSGTCVFEKENDPTVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVM 51 (100)
T ss_dssp CCCCCCCCCCCCCTTEEECSSCEEEEEESSCTTEEECTTCEEEEEEET
T ss_pred cCCEEEEEEcCCCCcEEeCCCCEEEEEEEcCCcCEECCCCEEEEEEec
Confidence 356678888888889999999999999999999999999999999853
No 55
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=96.83 E-value=0.0029 Score=60.13 Aligned_cols=62 Identities=19% Similarity=0.109 Sum_probs=53.0
Q ss_pred eeEEEEEEccCCCEEecCCeEEEEec----CceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecCC
Q 021956 103 ECELLKWFVKEGDEIEEFQPLCAVQS----DKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVGD 167 (305)
Q Consensus 103 eG~I~~w~v~eGD~V~~Gd~L~eIEt----dK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~~ 167 (305)
.| +.+.+++.||.|++||+|++|.. .+...+|.||.+|+|..+ .....|..|+.|+.|....
T Consensus 275 ~G-~~~~~~~~g~~V~~G~~La~i~d~~~~g~~~~~v~Ap~dG~v~~~--~~~~~V~~Gd~l~~ia~~~ 340 (354)
T 3cdx_A 275 TG-LFEPTHYVGEEVRTGETAGWIHFVEDVDTAPLELLYRRDGIVWFG--AGPGRVTRGDAVAVVMEDY 340 (354)
T ss_dssp CE-EEEESCCTTCEECTTSEEEEEECTTSSSCCCEEEECCSCEEEEEE--ECSSEECTTCEEEEEEEEC
T ss_pred CE-EEEEeCCCCCEeCCCCEEEEEECCCCCCCeeEEEEcCCCeEEEEE--eCCCccCCCCEEEEEeeec
Confidence 45 67888999999999999999987 477899999999999655 4778999999999997643
No 56
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=96.73 E-value=0.0033 Score=60.33 Aligned_cols=60 Identities=18% Similarity=0.277 Sum_probs=50.5
Q ss_pred eEEEEEEccCCCEEecCCeEEEEec------CceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEec
Q 021956 104 CELLKWFVKEGDEIEEFQPLCAVQS------DKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVV 165 (305)
Q Consensus 104 G~I~~w~v~eGD~V~~Gd~L~eIEt------dK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~ 165 (305)
+=|.+.+++.||.|++||+|++|-. .....+|.||.+|+|. .....-.|..|+.|+.|..
T Consensus 298 ~Gl~~~~v~lGd~V~kG~~la~I~d~~~~g~g~~~~~v~Ap~dGiVi--~~~~~p~V~~G~~l~~i~~ 363 (368)
T 3fmc_A 298 AGMVEYLGKVGVPMKATDPLVNLLRLDLYGTGEELTVLRLPEDGVPI--LHFASASVHQGTELYKVMT 363 (368)
T ss_dssp CEEEEECSCTTCCBCTTCEEEEEECGGGTTSSCSEEEEECSSSEEEE--EECSSSEECTTCEEEEEEE
T ss_pred CEEEEEeCCCCCEeCCCCEEEEEEcCCCCCCCCeeEEEEcCCCEEEE--EEeCCCccCCCCEEEEEee
Confidence 3344689999999999999999987 4577899999999994 4556679999999998864
No 57
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=96.12 E-value=0.0063 Score=43.86 Aligned_cols=33 Identities=12% Similarity=0.227 Sum_probs=30.6
Q ss_pred EEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 134 EITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 134 eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
+|.|+.+|+|.++++++|+.|+.|++|+.|+..
T Consensus 1 ~v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~~ 33 (72)
T 1z6h_A 1 TVSIQMAGNLWKVHVKAGDQIEKGQEVAILESM 33 (72)
T ss_dssp CEECCSSEEEEEECCCTTCEECTTCEEEEEEET
T ss_pred CEECcccEEEEEEEcCCcCEECCCCEEEEEECC
Confidence 378999999999999999999999999999864
No 58
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=96.05 E-value=0.0084 Score=43.24 Aligned_cols=34 Identities=32% Similarity=0.416 Sum_probs=31.5
Q ss_pred eEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 133 IEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 133 ~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
..|.++.+|+|.++++++|+.|+.|++|+.++..
T Consensus 6 ~~v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~~ 39 (74)
T 2d5d_A 6 NVVSAPMPGKVLRVLVRVGDRVRVGQGLLVLEAM 39 (74)
T ss_dssp CEEECSSCEEEEEECCCTTCEECTTCEEEEEEET
T ss_pred eEEecCCCEEEEEEEcCCCCEeCCCCEEEEEecc
Confidence 4688999999999999999999999999999864
No 59
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=96.00 E-value=0.0083 Score=43.89 Aligned_cols=35 Identities=34% Similarity=0.458 Sum_probs=32.2
Q ss_pred eeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 132 TIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 132 ~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
...|.++.+|+|.++++++|+.|+.|++|+.|+..
T Consensus 8 ~~~v~a~~~G~v~~~~v~~G~~V~~G~~L~~l~~~ 42 (77)
T 1dcz_A 8 EGEIPAPLAGTVSKILVKEGDTVKAGQTVLVLEAM 42 (77)
T ss_dssp SSEEEBSSSCEEEEECCCTTCEECTTSEEEEEEET
T ss_pred CeEEECCCCEEEEEEEcCCcCEEcCCCEEEEEEcc
Confidence 45789999999999999999999999999999864
No 60
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=95.86 E-value=0.0092 Score=47.25 Aligned_cols=34 Identities=26% Similarity=0.410 Sum_probs=31.8
Q ss_pred eEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 133 IEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 133 ~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
+.|.++.+|+|.++++++|+.|+.|++|+.|+..
T Consensus 2 ~~v~a~~~G~V~~v~v~~G~~V~~Gq~L~~ld~~ 35 (116)
T 2k32_A 2 VIIKPQVSGVIVNKLFKAGDKVKKGQTLFIIEQD 35 (116)
T ss_dssp EEECCSSCEEEEEECSCTTSEECTTCEEEEEECT
T ss_pred eEEeCcCCEEEEEEECCCcCEECCCCEEEEECHH
Confidence 5789999999999999999999999999999864
No 61
>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}
Probab=95.76 E-value=0.022 Score=53.41 Aligned_cols=60 Identities=18% Similarity=0.161 Sum_probs=48.3
Q ss_pred eEEEEEEccCCCEEecCCeEEEEec----CceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEec
Q 021956 104 CELLKWFVKEGDEIEEFQPLCAVQS----DKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVV 165 (305)
Q Consensus 104 G~I~~w~v~eGD~V~~Gd~L~eIEt----dK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~ 165 (305)
+-+...+++.||.|++||+|+++-. .+...+|.||.+|+|.-. ...-.|..|+.|+.|..
T Consensus 265 ~G~~~~~~~~g~~V~~G~~la~i~dp~~~G~~~~~v~Ap~dGiv~~~--~~~p~V~~Gd~l~~ia~ 328 (332)
T 2qj8_A 265 PGIFEPRCSVMDEVEQGDVVGVLHPMGSLSAASIDIRAQSKSTVFAI--RSAMYVQGNEEVAILAR 328 (332)
T ss_dssp SEEEEECSCTTCEECTTCEEEEEECTTCSSSCCEEEECSSSEEEEEE--ECSEEECTTCEEEEEEE
T ss_pred CeEEEEeCCCCCEeCCCCEEEEEECCCCCCCeeEEEEeCCCeEEEEE--eCCCeeCCCCEEEEEee
Confidence 3355688999999999999999954 457788999999999544 45668888999988764
No 62
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=95.48 E-value=0.015 Score=52.22 Aligned_cols=54 Identities=11% Similarity=0.067 Sum_probs=39.9
Q ss_pred cCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 112 KEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 112 ~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
+.|+.-..=..-+.|+.. ....|.++.+|+|.++++++|+.|+.|++|+.|+..
T Consensus 3 ~~~~~~~~v~~~G~v~~~-~~~~v~a~~~G~V~~v~v~~G~~V~kGq~L~~ld~~ 56 (277)
T 2f1m_A 3 KTEPLQITTELPGRTSAY-RIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPA 56 (277)
T ss_dssp -------CCEEEEEEECS-EEEEECCSSCEEEEEECSCTTCEECTTSCSEEECCH
T ss_pred eeeccceEEEEEEEEEee-eEEEEEccccEEEEEEEcCCCCEecCCCEEEEECcH
Confidence 444444444555677765 467899999999999999999999999999999864
No 63
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=95.44 E-value=0.0091 Score=45.10 Aligned_cols=35 Identities=23% Similarity=0.275 Sum_probs=32.0
Q ss_pred eeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 132 TIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 132 ~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
...|.|+.+|+|.++++++|+.|..|++|+.|+..
T Consensus 5 ~~~v~a~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~ 39 (84)
T 2kcc_A 5 PTVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVM 39 (84)
T ss_dssp TTEECCSSSCCEEEESSCTTEEECTTCEEEEEECS
T ss_pred CceEECCCCEEEEEEECCCCCEECCCCEEEEEEec
Confidence 34799999999999999999999999999999853
No 64
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=95.36 E-value=0.016 Score=49.79 Aligned_cols=60 Identities=15% Similarity=0.255 Sum_probs=51.0
Q ss_pred ceeEEEEEEccCCCEEec----CCeEEEEecCceeeEEecCCCcEEEEE-------------------------------
Q 021956 102 AECELLKWFVKEGDEIEE----FQPLCAVQSDKATIEITSRYKGKVAQL------------------------------- 146 (305)
Q Consensus 102 ~eG~I~~w~v~eGD~V~~----Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i------------------------------- 146 (305)
.+|+|..+. +..|.|-. |+.++..-++ ..+.||++|+|..+
T Consensus 19 ~~G~vv~l~-~v~D~vfs~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHiGidTV~l~G~ 94 (161)
T 1f3z_A 19 LSGEIVNIE-DVPDVVFAEKIVGDGIAIKPTG---NKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGE 94 (161)
T ss_dssp SCEEEEEGG-GSSSHHHHTTSSCEEEEEEECS---SEEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSGGGGTTT
T ss_pred CCeEEEEeE-ECCCccccccceeCeEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEeCCCCEEEEEECccchhcCCC
Confidence 368998865 77888766 8889877776 47899999999988
Q ss_pred ----eeCCCCeeecCceEEEEec
Q 021956 147 ----LHAPGNIVKVGETLLKLVV 165 (305)
Q Consensus 147 ----~v~~Gd~V~vG~~La~i~~ 165 (305)
++++||.|+.|++|+.++-
T Consensus 95 gF~~~V~~Gd~V~~G~~L~~~d~ 117 (161)
T 1f3z_A 95 GFKRIAEEGQRVKVGDTVIEFDL 117 (161)
T ss_dssp TEEECSCTTCEECTTCEEEEECH
T ss_pred ccEEEEeCcCEECCCCEEEEECH
Confidence 8899999999999999974
No 65
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=95.06 E-value=0.017 Score=49.27 Aligned_cols=59 Identities=12% Similarity=0.188 Sum_probs=50.1
Q ss_pred eeEEEEEEccCCCEEec----CCeEEEEecCceeeEEecCCCcEEEEE--------------------------------
Q 021956 103 ECELLKWFVKEGDEIEE----FQPLCAVQSDKATIEITSRYKGKVAQL-------------------------------- 146 (305)
Q Consensus 103 eG~I~~w~v~eGD~V~~----Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i-------------------------------- 146 (305)
+|+|..+ -+..|.|-. |+.++...++ ..+.||++|+|..+
T Consensus 15 ~G~vv~l-~~v~D~vf~~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~HAigi~~~~G~evLiHiGidTv~l~G~g 90 (154)
T 2gpr_A 15 DGTIITL-DEVEDEVFKERMLGDGFAINPKS---NDFHAPVSGKLVTAFPTKHAFGIQTKSGVEILLHIGLDTVSLDGNG 90 (154)
T ss_dssp SEEEECG-GGSSCHHHHTTSSCEEEEEEESS---SEEECSSCEEEEECCTTCSEEEEECTTSCEEEEECSSSGGGGTTCS
T ss_pred CeEEEEe-eECCCccccccceeCeEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEcCCCCEEEEEECcchhhcCCCc
Confidence 6888886 477888766 8889887776 48999999999874
Q ss_pred ---eeCCCCeeecCceEEEEec
Q 021956 147 ---LHAPGNIVKVGETLLKLVV 165 (305)
Q Consensus 147 ---~v~~Gd~V~vG~~La~i~~ 165 (305)
+|++||.|+.|++|+.++-
T Consensus 91 F~~~V~~Gd~V~~G~~L~~~d~ 112 (154)
T 2gpr_A 91 FESFVTQDQEVNAGDKLVTVDL 112 (154)
T ss_dssp EEECCCTTCEECTTCEEEEECH
T ss_pred eEEEEcCCCEEcCCCEEEEECH
Confidence 8899999999999999974
No 66
>2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima}
Probab=94.98 E-value=0.024 Score=50.10 Aligned_cols=32 Identities=19% Similarity=0.333 Sum_probs=26.6
Q ss_pred EEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEE
Q 021956 108 KWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQ 145 (305)
Q Consensus 108 ~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~ 145 (305)
.++|++|+.|++||.||+-+ .|-+.++|+|.+
T Consensus 22 ~L~V~dG~~VkkG~~laeWD------PIitE~~G~V~d 53 (193)
T 2xha_A 22 KLHVNNGKDVNKGDLIAEEP------PIYARRSGVIVD 53 (193)
T ss_dssp EESCCTTCEECTTCEEEEEC------CEECSSCEEEEE
T ss_pred EEEECCCCEEcCCCEEEEeC------cEEEccCEEEEe
Confidence 67999999999999999866 677777777743
No 67
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=94.80 E-value=0.025 Score=48.60 Aligned_cols=61 Identities=18% Similarity=0.250 Sum_probs=50.9
Q ss_pred ceeEEEEEEccCCCEEec----CCeEEEEecCceeeEEecCCCcEEEEE-------------------------------
Q 021956 102 AECELLKWFVKEGDEIEE----FQPLCAVQSDKATIEITSRYKGKVAQL------------------------------- 146 (305)
Q Consensus 102 ~eG~I~~w~v~eGD~V~~----Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i------------------------------- 146 (305)
.+|+|..+ .+..|.|-. |+.++..-++ ..+.||++|+|..+
T Consensus 19 ~~G~vv~l-~~v~D~vfs~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHIGidTV~l~G~ 94 (162)
T 1ax3_A 19 ITGEIHPI-TDVPDQVFSGKMMGDGFAILPSE---GIVVSPVRGKILNVFPTKHAIGLQSDGGREILIHFGIDTVSLKGE 94 (162)
T ss_dssp CSEEEEEG-GGSSSHHHHTCTTSEEEEEEECS---SEEEESCCEEEEECCSSSSEEEEESSSSCEEEEECSSSTTTTTTT
T ss_pred CceEEEEe-EECCCccccccceeceEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEcCCCCEEEEEECccchhcCCC
Confidence 47999886 778888766 8888877763 47899999999988
Q ss_pred ----eeCCCCeeecCceEEEEecC
Q 021956 147 ----LHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 147 ----~v~~Gd~V~vG~~La~i~~~ 166 (305)
+|++||.|+.|++|+.++-+
T Consensus 95 gF~~~V~~Gd~V~~G~~L~~~d~~ 118 (162)
T 1ax3_A 95 GFTSFVSEGDRVEPGQKLLEVDLD 118 (162)
T ss_dssp TEEESCCCCSEECSEEEEEEECHH
T ss_pred ccEEEEeCCCEEcCCCEEEEECHH
Confidence 88899999999999999753
No 68
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=94.78 E-value=0.024 Score=52.83 Aligned_cols=58 Identities=17% Similarity=0.309 Sum_probs=47.2
Q ss_pred EccCCCEEecCCeEEEEecC-ceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecCC
Q 021956 110 FVKEGDEIEEFQPLCAVQSD-KATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVGD 167 (305)
Q Consensus 110 ~v~eGD~V~~Gd~L~eIEtd-K~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~~ 167 (305)
.++.|+....-..-+.|+.+ .....|.++.+|+|.++++++|+.|+.|++|+.|+..+
T Consensus 34 ~v~~~~~~~~~~~~G~v~~~p~~~~~v~~~~~G~V~~v~v~~G~~V~kGq~L~~ld~~~ 92 (359)
T 3lnn_A 34 PATRETVAAPFNLPAMIEADPAKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD 92 (359)
T ss_dssp ECEEEEECCEEEEEEEEECCSSSEEEECCSSCEEEEECCSCTTCEECTTCEEEEEECSS
T ss_pred EeeecccceeEEEEEEEEECCCcEEEEeccCCEEEEEEEcCCCCEEcCCCEEEEEChHH
Confidence 34555555555566678875 66789999999999999999999999999999999753
No 69
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=94.63 E-value=0.031 Score=51.60 Aligned_cols=56 Identities=18% Similarity=0.213 Sum_probs=42.1
Q ss_pred EccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 110 FVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 110 ~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
.++.|+.-..=..-+.|+.. ....|.++.+|+|.++++++|+.|+.|++|+.|+..
T Consensus 10 ~v~~~~~~~~v~~~G~v~~~-~~~~v~~~~~G~V~~v~v~~G~~V~kG~~L~~ld~~ 65 (341)
T 3fpp_A 10 IVRPGDLQQSVLATGKLDAL-RKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPE 65 (341)
T ss_dssp ---CCCCCCEEEEEEEEEES-SEEECCCSSCEEEEEECCCTTCEECTTCEEEEECCH
T ss_pred EEEEeceeEEEEEEEEEEee-EEEEEeccCCcEEEEEEeCCCCEECCCCEEEEEChH
Confidence 34555544444445566655 456899999999999999999999999999999864
No 70
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=94.48 E-value=0.03 Score=43.48 Aligned_cols=36 Identities=17% Similarity=0.337 Sum_probs=32.5
Q ss_pred eeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 131 ATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 131 ~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
....|.++.+|+|.++++++|+.|+.|++|+.|+..
T Consensus 13 ~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~ 48 (99)
T 2ejm_A 13 TQGGPLAPMTGTIEKVFVKAGDKVKAGDSLMVMIAM 48 (99)
T ss_dssp CCSSCBCSSSEEEEEECCCTTEEECSSCEEEEEESS
T ss_pred CceEEecCCCEEEEEEECCCCCEECCCCEEEEEEcc
Confidence 345689999999999999999999999999999864
No 71
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=94.39 E-value=0.022 Score=43.91 Aligned_cols=35 Identities=20% Similarity=0.272 Sum_probs=31.5
Q ss_pred eeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 132 TIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 132 ~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
...|.++.+|+|.++++++|+.|+.|++|+.|+..
T Consensus 25 ~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~ 59 (94)
T 2jku_A 25 SSVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEAM 59 (94)
T ss_dssp CCCCCCSSSCEEEEECCCTTCCCCTTCCCEEEEC-
T ss_pred ceEEECCCCEEEEEEECCCCCEEcCCCEEEEEecc
Confidence 45688999999999999999999999999999864
No 72
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=94.26 E-value=0.034 Score=41.02 Aligned_cols=34 Identities=24% Similarity=0.215 Sum_probs=31.3
Q ss_pred eEEecCCCcEEEEE-------eeCCCCeeecCceEEEEecC
Q 021956 133 IEITSRYKGKVAQL-------LHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 133 ~eI~Ap~~Gvv~~i-------~v~~Gd~V~vG~~La~i~~~ 166 (305)
..|.+|..|+|.++ ++++|+.|+.|++|+.|+..
T Consensus 5 ~~v~a~~~G~v~~~~~~~~~~~v~~G~~V~~G~~l~~ie~~ 45 (80)
T 1bdo_A 5 HIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAM 45 (80)
T ss_dssp EEEECSSSEEEESSSSTTSCCSCCTTCEECTTCEEEEEEET
T ss_pred eEEEcCCCeEEEEecccCcccccCCcCEECCCCEEEEEEec
Confidence 46899999999998 89999999999999999864
No 73
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=93.75 E-value=0.061 Score=39.32 Aligned_cols=27 Identities=15% Similarity=0.274 Sum_probs=25.0
Q ss_pred ceeEEEEEEccCCCEEecCCeEEEEec
Q 021956 102 AECELLKWFVKEGDEIEEFQPLCAVQS 128 (305)
Q Consensus 102 ~eG~I~~w~v~eGD~V~~Gd~L~eIEt 128 (305)
.+|+|.++++++||.|..|++|+.|++
T Consensus 51 ~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (77)
T 2l5t_A 51 VRGKIVKILYREGQVVPVGSTLLQIDT 77 (77)
T ss_dssp CCEEEEEECCCTTCEECSCSEEEEEEC
T ss_pred CCEEEEEEEeCCcCEECCCCEEEEEEC
Confidence 479999999999999999999999874
No 74
>2xhc_A Transcription antitermination protein NUSG; 2.45A {Thermotoga maritima}
Probab=93.49 E-value=0.073 Score=50.94 Aligned_cols=48 Identities=23% Similarity=0.296 Sum_probs=36.6
Q ss_pred EEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEE---------------------------e--eCCCCeeecCc
Q 021956 108 KWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQL---------------------------L--HAPGNIVKVGE 158 (305)
Q Consensus 108 ~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i---------------------------~--v~~Gd~V~vG~ 158 (305)
.++|++||.|++||.||+-+ .|-+..+|+|.+. . +++|+.|..|+
T Consensus 62 ~l~v~~g~~V~~g~~la~wd------pii~e~~G~v~~~~~~~~p~i~i~d~~g~~~y~lp~ga~l~~~v~~g~~v~~G~ 135 (352)
T 2xhc_A 62 KLHVNNGKDVNKGDLIAEEP------PIYARRSGVIVDVKNVRKIVVETIDRKYTKTYYIPESAGIEPGLRVGTKVKQGL 135 (352)
T ss_dssp EESCCTTCEECTTCEEEEEC------CEECSSCEEEEEEEEEEEEEEECTTCSSEEEEEEEGGGCBCTTCCTTCEECTTC
T ss_pred EEEecCCCEEcCCCEEEEec------cEEEecceEEEeeccCCceEEEEEcCCCCEEEEcCCCcEEEEecCCCCEEccCc
Confidence 78999999999999999954 4555555554322 2 77899999999
Q ss_pred eEE
Q 021956 159 TLL 161 (305)
Q Consensus 159 ~La 161 (305)
+|+
T Consensus 136 vla 138 (352)
T 2xhc_A 136 PLS 138 (352)
T ss_dssp BSB
T ss_pred EEe
Confidence 887
No 75
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=92.96 E-value=0.089 Score=50.60 Aligned_cols=61 Identities=18% Similarity=0.157 Sum_probs=47.7
Q ss_pred EEEEEccCCCEEecCCeEEEEecC-ceeeEEecCCCcEEEEEee-CCCCeeecCceEEEEecC
Q 021956 106 LLKWFVKEGDEIEEFQPLCAVQSD-KATIEITSRYKGKVAQLLH-APGNIVKVGETLLKLVVG 166 (305)
Q Consensus 106 I~~w~v~eGD~V~~Gd~L~eIEtd-K~~~eI~Ap~~Gvv~~i~v-~~Gd~V~vG~~La~i~~~ 166 (305)
|.-..++.|+....=...+.|+.+ .....|.++.+|+|.++++ ++|+.|+.|++|+.|+..
T Consensus 94 V~~~~v~~~~~~~~v~~~G~V~~~~~~~~~v~a~~~G~V~~v~V~~~Gd~VkkGq~L~~ld~~ 156 (413)
T 3ne5_B 94 VKTATVTRGPLTFAQSFPANVSYNEYQYAIVQARAAGFIDKVYPLTVGDKVQKGTPLLDLTIP 156 (413)
T ss_dssp CCEEECEEECCEEEEEEEEEEEEEEEEEEEECCSSCEEEEEECSCCTTCEECTTCEEEEEECC
T ss_pred ceEEEEEEeecceEEEEEEEEEECCCceEEEecccCEEEEEEEeCCCCCEEcCCCEEEEEcCH
Confidence 334445666666666666677753 4567899999999999998 999999999999999953
No 76
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=92.91 E-value=0.089 Score=38.67 Aligned_cols=27 Identities=15% Similarity=0.153 Sum_probs=25.0
Q ss_pred eeEEEEEEccCCCEEecCCeEEEEecC
Q 021956 103 ECELLKWFVKEGDEIEEFQPLCAVQSD 129 (305)
Q Consensus 103 eG~I~~w~v~eGD~V~~Gd~L~eIEtd 129 (305)
+|+|.++++++||.|..|++|+.|+.+
T Consensus 52 ~G~v~~~~v~~G~~v~~g~~l~~i~~~ 78 (79)
T 1ghj_A 52 DGVIAEIVKNEGDTVLSGELLGKLTEG 78 (79)
T ss_dssp CEEEEEESSCTTCEECTTCEEEEECCC
T ss_pred CEEEEEEEcCCcCEECCCCEEEEEecC
Confidence 799999999999999999999998753
No 77
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=92.84 E-value=0.066 Score=50.45 Aligned_cols=54 Identities=15% Similarity=0.144 Sum_probs=38.5
Q ss_pred cCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 112 KEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 112 ~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
+.|+....-...+.|+.. ....|.++.+|+|.++++++|+.|+.|++|+.|+..
T Consensus 24 ~~~~~~~~~~~~G~v~~~-~~~~v~a~v~G~V~~v~v~~Gd~V~kGq~L~~ld~~ 77 (369)
T 1vf7_A 24 EAQTVTLNTELPGRTNAF-RIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPA 77 (369)
T ss_dssp -----CCEEEEEEECEES-CEEEECCSSCEEEEECCSCSSEEECTTSEEEEECCH
T ss_pred EeeccceEEEEEEEEEee-eEEEEEeeCceEEEEEEcCCCCEEcCCCEEEEECcH
Confidence 334333333344455553 356799999999999999999999999999999853
No 78
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=92.68 E-value=0.075 Score=39.03 Aligned_cols=27 Identities=11% Similarity=0.117 Sum_probs=25.3
Q ss_pred eeEEEEEEccCCCEEecCCeEEEEecC
Q 021956 103 ECELLKWFVKEGDEIEEFQPLCAVQSD 129 (305)
Q Consensus 103 eG~I~~w~v~eGD~V~~Gd~L~eIEtd 129 (305)
+|+|.++++++||.|..|++|+.|+..
T Consensus 51 ~G~v~~~~v~~G~~V~~G~~l~~i~~~ 77 (80)
T 1qjo_A 51 AGVVKELKVNVGDKVKTGSLIMIFEVE 77 (80)
T ss_dssp CEEEEECCCCTTCEECTTCCCEEEESC
T ss_pred CEEEEEEecCCCCEECCCCEEEEEEcc
Confidence 799999999999999999999999864
No 79
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=92.22 E-value=0.1 Score=39.34 Aligned_cols=29 Identities=31% Similarity=0.475 Sum_probs=26.1
Q ss_pred ceeEEEEEEccCCC-EEecCCeEEEEecCc
Q 021956 102 AECELLKWFVKEGD-EIEEFQPLCAVQSDK 130 (305)
Q Consensus 102 ~eG~I~~w~v~eGD-~V~~Gd~L~eIEtdK 130 (305)
.+|+|.++++++|| .|..|++|+.|+...
T Consensus 55 ~~G~v~~~~v~~G~~~V~~G~~l~~i~~~~ 84 (87)
T 3crk_C 55 EEGYLAKILVPEGTRDVPLGTPLCIIVEKE 84 (87)
T ss_dssp SCEEEEEESSCTTCCCEETTCEEEEEESSS
T ss_pred cCcEEEEEEECCCCeEECCCCEEEEEEccc
Confidence 47999999999999 899999999998643
No 80
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=92.15 E-value=0.13 Score=37.81 Aligned_cols=27 Identities=19% Similarity=0.196 Sum_probs=25.1
Q ss_pred eeEEEEEEccCCCEEecCCeEEEEecC
Q 021956 103 ECELLKWFVKEGDEIEEFQPLCAVQSD 129 (305)
Q Consensus 103 eG~I~~w~v~eGD~V~~Gd~L~eIEtd 129 (305)
+|+|.++++++||.|..|++|+.|+..
T Consensus 49 ~G~v~~~~v~~G~~V~~g~~l~~i~~~ 75 (79)
T 1iyu_A 49 AGVVKSVSVKLGDKLKEGDAIIELEPA 75 (79)
T ss_dssp SSEEEEESCCTTCEEETTSEEEEEECC
T ss_pred CEEEEEEEeCCCCEECCCCEEEEEecC
Confidence 799999999999999999999999764
No 81
>3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis}
Probab=92.15 E-value=0.2 Score=43.19 Aligned_cols=49 Identities=18% Similarity=0.138 Sum_probs=41.1
Q ss_pred eeEEEEEEccCCCEEecCCeEEEEecCceee-EEecCCCcEEEEEeeCCC
Q 021956 103 ECELLKWFVKEGDEIEEFQPLCAVQSDKATI-EITSRYKGKVAQLLHAPG 151 (305)
Q Consensus 103 eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~-eI~Ap~~Gvv~~i~v~~G 151 (305)
+|..+-..+.+||.|.+||.|+-|.|.|-.+ -+.||.+|+|.-+.--++
T Consensus 108 eG~~V~~i~~~G~rV~kgd~lA~i~T~KGEVR~i~spv~G~Vv~v~e~p~ 157 (169)
T 3d4r_A 108 EGYKVYPIMDFGFRVLKGYRLATLESKKGDLRYVNSPVSGTVIFMNEIPS 157 (169)
T ss_dssp CSSEEEECCCCSEEECTTCEEEEEECTTCCEEEEECSSSEEEEEEEEETT
T ss_pred CceEEEEEcCcCcEeccCCeEEEEEecCceEEEecCCCcEEEEEEEecCC
Confidence 6777788899999999999999999999765 499999999977654333
No 82
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=92.06 E-value=0.14 Score=39.23 Aligned_cols=28 Identities=14% Similarity=0.182 Sum_probs=25.8
Q ss_pred ceeEEEEEEccCCCEEecCCeEEEEecC
Q 021956 102 AECELLKWFVKEGDEIEEFQPLCAVQSD 129 (305)
Q Consensus 102 ~eG~I~~w~v~eGD~V~~Gd~L~eIEtd 129 (305)
.+|+|.++++++||.|..|++|++|+..
T Consensus 54 ~~G~V~~i~v~~G~~V~~G~~l~~i~~~ 81 (93)
T 1k8m_A 54 YDGVIKKLYYNLDDIAYVGKPLVDIETE 81 (93)
T ss_dssp SCEEEEEECCCSSCEECTTSEEEEEECS
T ss_pred CCEEEEEEEcCCCCEeCCCCEEEEEecC
Confidence 4799999999999999999999999864
No 83
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=91.95 E-value=0.11 Score=38.21 Aligned_cols=31 Identities=16% Similarity=0.227 Sum_probs=28.2
Q ss_pred ecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 136 TSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 136 ~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
-++..|.|.++++++|+.|+.|++|+.++..
T Consensus 11 g~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~ 41 (81)
T 1gjx_A 11 GGHENVDIIAVEVNVGDTIAVDDTLITLETD 41 (81)
T ss_dssp SSCSSEEEEEECCCSSCBCCSSCCCEEEECS
T ss_pred CCCCcEEEEEEEcCCCCEECCCCEEEEEEeC
Confidence 3578999999999999999999999999864
No 84
>2auk_A DNA-directed RNA polymerase beta' chain; sandwich-barrel hybrid motif, transferase; 2.30A {Escherichia coli}
Probab=91.57 E-value=0.21 Score=43.67 Aligned_cols=46 Identities=13% Similarity=0.154 Sum_probs=39.2
Q ss_pred EEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeee
Q 021956 108 KWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVK 155 (305)
Q Consensus 108 ~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~ 155 (305)
.++|++||.|++||+||+. |..+..|-+..+|+|.--.+.+|-++.
T Consensus 63 ~L~V~dG~~V~~G~~laew--Dp~t~pIisE~~G~V~f~dii~G~t~~ 108 (190)
T 2auk_A 63 VLAKGDGEQVAGGETVANW--DPHTMPVITEVSGFVRFTDMIDGQTIT 108 (190)
T ss_dssp EESSCTTCEECTTCEEEEC--CSSEEEEECSSCEEEEEESCCBTTTEE
T ss_pred EEEecCCCEEcCCCEEEEE--cCcCCcEEeccccEEEEEeccCCcceE
Confidence 6799999999999999977 788999999999999766666765544
No 85
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.28 E-value=0.21 Score=38.75 Aligned_cols=29 Identities=21% Similarity=0.449 Sum_probs=26.2
Q ss_pred CCcEEEEEeeCCCCeeecCceEEEEecCC
Q 021956 139 YKGKVAQLLHAPGNIVKVGETLLKLVVGD 167 (305)
Q Consensus 139 ~~Gvv~~i~v~~Gd~V~vG~~La~i~~~~ 167 (305)
..|+|.++++++||.|+.|++|+.|+...
T Consensus 20 ~~G~i~~~~v~~Gd~V~~G~~L~~ie~~K 48 (98)
T 2dnc_A 20 EEGNIVKWLKKEGEAVSAGDALCEIETDK 48 (98)
T ss_dssp SEECEEEESSCTTCEECTTSEEEEEECSS
T ss_pred ccEEEEEEEcCCCCEeCCCCEEEEEEccc
Confidence 47899999999999999999999998643
No 86
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=91.27 E-value=0.057 Score=50.31 Aligned_cols=55 Identities=24% Similarity=0.355 Sum_probs=42.3
Q ss_pred ccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 111 VKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 111 v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
++.|+.-..-..-+.|+.. ....|.++.+|+|.++++++|+.|+.|++|+.|+..
T Consensus 12 v~~~~~~~~v~~~G~v~~~-~~~~v~~~~~G~V~~v~v~~G~~V~~Gq~L~~ld~~ 66 (369)
T 4dk0_A 12 VKRGNIEKNVVATGSIESI-NTVDVGAQVSGKITKLYVKLGQQVKKGDLLAEIDST 66 (369)
T ss_dssp CCEECCCCCCEEEEEEECS-SCCCBCCCSCSBCCEECCCTTSCCCSSCCCEECCCH
T ss_pred EEecceeEEEEEeEEEEee-eeEEEecCCCcEEEEEEECCCCEECCCCEEEEEcCH
Confidence 3444444444455566643 456799999999999999999999999999999864
No 87
>2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima}
Probab=89.89 E-value=0.14 Score=45.06 Aligned_cols=46 Identities=26% Similarity=0.385 Sum_probs=34.9
Q ss_pred ccCCCEEecCCeEEEEecCceeeEEecCCCcEEEE--------------------------E--eeCCCCeeecCceEEE
Q 021956 111 VKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQ--------------------------L--LHAPGNIVKVGETLLK 162 (305)
Q Consensus 111 v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~--------------------------i--~v~~Gd~V~vG~~La~ 162 (305)
|++|+.|..||+|+ -+ ..|-|..+|+|.- + +|++||.|..|+.|+.
T Consensus 85 V~dG~~V~~GdvLA---Kd---~AIiaEIdG~V~fgkgkrrivI~~~~Ge~~eylIPk~k~i~~~V~eGd~V~~Ge~L~D 158 (193)
T 2xha_A 85 LRVGTKVKQGLPLS---KN---EEYICELDGKIVEIERMKKVVVQTPDGEQDVYYIPLDVFDRDRIKKGKEVKQGEMLAE 158 (193)
T ss_dssp CCTTCEECTTSBSS---TT---SCSBCCSSEEEEEEEEEEEEEEECTTSCEEEEEEEGGGCCTTTSCTTCEECTTCEEEC
T ss_pred cCCCCEEcCCCEEe---cC---CeEEEccceEEEECCCeEEEEEECCCCCEEEEEeCCCCccccccCCCCEECCCCCccc
Confidence 89999999999998 22 3345666666531 3 7889999999998875
No 88
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=89.77 E-value=0.24 Score=40.66 Aligned_cols=29 Identities=31% Similarity=0.475 Sum_probs=26.1
Q ss_pred ceeEEEEEEccCCC-EEecCCeEEEEecCc
Q 021956 102 AECELLKWFVKEGD-EIEEFQPLCAVQSDK 130 (305)
Q Consensus 102 ~eG~I~~w~v~eGD-~V~~Gd~L~eIEtdK 130 (305)
.+|+|.++++++|| .|..|++|++|+...
T Consensus 77 ~~G~V~~i~v~~Gd~~V~~G~~L~~i~~~~ 106 (128)
T 1y8o_B 77 EEGYLAKILVPEGTRDVPLGTPLCIIVEKE 106 (128)
T ss_dssp SCEEEEEESSCTTCCSEETTCEEEEEESSG
T ss_pred CCeEEEEEEeCCCCeeecCCCEEEEEecCc
Confidence 47999999999998 899999999998643
No 89
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=89.71 E-value=0.21 Score=39.53 Aligned_cols=28 Identities=14% Similarity=0.326 Sum_probs=25.9
Q ss_pred CCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 139 YKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 139 ~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
..|+|.++++++||.|+.|++|+.|+..
T Consensus 20 ~~G~v~~~~v~~Gd~V~~G~~L~~iE~~ 47 (108)
T 2dne_A 20 QAGTIARWEKKEGDKINEGDLIAEVETD 47 (108)
T ss_dssp CEEEEEECSSCTTCEECTTSEEEEEECS
T ss_pred ccEEEEEEEcCCCCEecCCCEEEEEEcC
Confidence 4799999999999999999999999864
No 90
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=89.53 E-value=0.14 Score=38.37 Aligned_cols=36 Identities=14% Similarity=0.171 Sum_probs=29.9
Q ss_pred eEEEeecCCCCCCceeEEEEEEccCCCEEecCCeEEEEecCc
Q 021956 89 IVDVPLAQTGEGIAECELLKWFVKEGDEIEEFQPLCAVQSDK 130 (305)
Q Consensus 89 ~~~i~lP~lges~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK 130 (305)
...|+.|. +|+|.++++++||.|..|++|+.|+.+.
T Consensus 39 ~~~i~Ap~------~G~V~~~~v~~G~~V~~G~~l~~i~~~~ 74 (85)
T 2k7v_A 39 SMEVPAPF------AGVVKELKVNVGDKVKTGSLIMIFEVEG 74 (85)
T ss_dssp EEEEECSS------CBCCCEECSCTTCCBCTTSEEEEEECCS
T ss_pred EEEEECCC------CEEEEEEEeCCCCEECCCCEEEEEEcCC
Confidence 45566554 6899999999999999999999998653
No 91
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=88.25 E-value=0.86 Score=49.74 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=32.3
Q ss_pred eeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 132 TIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 132 ~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
...|.||..|+|.+++|++||.|+.||+|+.|+..
T Consensus 1077 ~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~ieam 1111 (1150)
T 3hbl_A 1077 PSHIGAQMPGSVTEVKVSVGETVKANQPLLITEAM 1111 (1150)
T ss_dssp SSEEECSSSEEEEEECCCTTCEECTTCEEEEEESS
T ss_pred CceeecCceEEEEEEEeCCCCEECCCCEEEEEEec
Confidence 35699999999999999999999999999999864
No 92
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=86.95 E-value=0.54 Score=48.35 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=32.2
Q ss_pred eeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 132 TIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 132 ~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
...|.||..|+|.+++|++||.|+.||+|+.|+..
T Consensus 612 ~~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iEam 646 (681)
T 3n6r_A 612 SKMLLCPMPGLIVKVDVEVGQEVQEGQALCTIEAM 646 (681)
T ss_dssp CSEEECCSCEEEEEECCCTTCEECTTCEEEEEECS
T ss_pred CCeEECCCcEEEEEEEeCCCCEEcCCCEEEEEEec
Confidence 45699999999999999999999999999999863
No 93
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=86.54 E-value=0.11 Score=38.33 Aligned_cols=30 Identities=23% Similarity=0.310 Sum_probs=26.8
Q ss_pred CCCcEEEEEeeCCCCeeecCceEEEEecCC
Q 021956 138 RYKGKVAQLLHAPGNIVKVGETLLKLVVGD 167 (305)
Q Consensus 138 p~~Gvv~~i~v~~Gd~V~vG~~La~i~~~~ 167 (305)
...|+|.++++++||.|+.|++|+.++...
T Consensus 14 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k 43 (80)
T 1pmr_A 14 VADATVATWHKKPGDAVVRDEVLVEIETDK 43 (80)
T ss_dssp CSCEECCBCCCCTTCCBSSSCCBCBCCSSS
T ss_pred CccEEEEEEECCCcCEECCCCEEEEEEccc
Confidence 468999999999999999999999998643
No 94
>3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1
Probab=86.32 E-value=1.2 Score=38.92 Aligned_cols=60 Identities=13% Similarity=0.278 Sum_probs=40.1
Q ss_pred eeEEEEEEccCCCEEe----cCCeEEEEecCceeeEEecCCCcEEEEE--------------------------------
Q 021956 103 ECELLKWFVKEGDEIE----EFQPLCAVQSDKATIEITSRYKGKVAQL-------------------------------- 146 (305)
Q Consensus 103 eG~I~~w~v~eGD~V~----~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i-------------------------------- 146 (305)
+|++..+ -+.-|.|= -||-++..=++. .|.||++|+|..+
T Consensus 42 ~G~vi~L-~eV~D~vFs~~~mGdG~AI~P~~g---~v~AP~dG~V~~vfpT~HAigi~s~~G~EvLIHIGiDTV~L~G~g 117 (183)
T 3our_B 42 SGEIVNI-EDVPDVVFAEKIVGDGIAIKPTGN---KMVAPVNGTIGKIFETNHAFSIESDDGVELFVHFGIDTVELKGEG 117 (183)
T ss_dssp CEEEEEG-GGSSCHHHHTTSSCEEEEEEECSS---EEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSGGGGTTTT
T ss_pred ceEEEEc-hhCcChHhcccCccCeEEEEcCCC---EEEeCCCeEEEEECCCCCEEEEEeCCCCEEEEEecccccccCCcc
Confidence 4666543 34445441 266666554443 6778888877766
Q ss_pred ---eeCCCCeeecCceEEEEecC
Q 021956 147 ---LHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 147 ---~v~~Gd~V~vG~~La~i~~~ 166 (305)
+|++||.|+.||+|+.++-+
T Consensus 118 F~~~V~~Gd~Vk~Gd~L~~fD~~ 140 (183)
T 3our_B 118 FTRIAEEGQTVKAGDTVIEFDLA 140 (183)
T ss_dssp EEECSCTTCEECTTCEEEEECHH
T ss_pred ceEEEeCcCEEcCCCEEEEECHH
Confidence 56699999999999998753
No 95
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=85.00 E-value=0.53 Score=39.87 Aligned_cols=58 Identities=22% Similarity=0.229 Sum_probs=37.4
Q ss_pred eeEEEEEEccCCCEEecCCeEEEEecCce---------eeEEecCCCcEEEEEeeCCCCeeecCceEEEE
Q 021956 103 ECELLKWFVKEGDEIEEFQPLCAVQSDKA---------TIEITSRYKGKVAQLLHAPGNIVKVGETLLKL 163 (305)
Q Consensus 103 eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~---------~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i 163 (305)
+|+=-+.+|++||+|+.||+|+++.-++. .+-+.. +. +..+....+..|..|+.|+.+
T Consensus 87 ~G~gF~~~V~~Gd~V~~G~~L~~~d~~~i~~~g~~~~t~vvvtn--~~-~~~~~~~~~~~v~~g~~~~~~ 153 (154)
T 2gpr_A 87 DGNGFESFVTQDQEVNAGDKLVTVDLKSVAKKVPSIKSPIIFTN--NG-GKTLEIVKMGEVKQGDVVAIL 153 (154)
T ss_dssp TTCSEEECCCTTCEECTTCEEEEECHHHHHHHSSCCCEEEEEEE--CS-SCCCSCBCCEEECTTCEEEEE
T ss_pred CCCceEEEEcCCCEEcCCCEEEEECHHHHHhcCCCCeEEEEEEC--CC-cceEEEccCceEcCCCEEEEe
Confidence 55666889999999999999999975332 122222 11 112333345667788887765
No 96
>3lu0_D DNA-directed RNA polymerase subunit beta'; E. coli RNA polymerase, nucleotidyltransferase, transcription, transferase; 11.20A {Escherichia coli} PDB: 3iyd_D*
Probab=83.76 E-value=0.9 Score=50.23 Aligned_cols=34 Identities=12% Similarity=0.184 Sum_probs=25.1
Q ss_pred EEEccCCCEEecCCeEEEEecCceeeEEecCCCcEE
Q 021956 108 KWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKV 143 (305)
Q Consensus 108 ~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv 143 (305)
.++|++||.|++||+|++.+ --+..|-+.++|+|
T Consensus 1002 ~l~v~~g~~V~~g~~ia~wD--p~~~piise~~G~v 1035 (1407)
T 3lu0_D 1002 VLAKGDGEQVAGGETVANWD--PHTMPVITEVSGFV 1035 (1407)
T ss_dssp EESSCSSCEECTTCEEEECC--SSCCCEECSSCEEE
T ss_pred EEEEcCCCEecCCCEEEEEe--cCceeEEeccceEE
Confidence 57899999999999999874 34445555555544
No 97
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=82.83 E-value=1 Score=49.49 Aligned_cols=36 Identities=19% Similarity=0.301 Sum_probs=32.9
Q ss_pred eeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 131 ATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 131 ~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
....|.||..|+|.+++|++||.|+.||+|+.|+..
T Consensus 1166 ~~~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iEam 1201 (1236)
T 3va7_A 1166 DAELLYSEYTGRFWKPVAAVGDHVEAGDGVIIIEAM 1201 (1236)
T ss_dssp TCEEEECSSCEEEEEESSCTTCEECSSCEEEEEEET
T ss_pred CCcEEeCCCcEEEEEEEcCCCCEECCCCEEEEEEec
Confidence 345699999999999999999999999999999964
No 98
>2bco_A Succinylglutamate desuccinylase; NESG, VPR14, structural genomics, PSI, protein structure initiative; 2.33A {Vibrio parahaemolyticus} SCOP: c.56.5.7 PDB: 2g9d_A
Probab=81.08 E-value=1.2 Score=41.96 Aligned_cols=50 Identities=8% Similarity=-0.006 Sum_probs=39.6
Q ss_pred EEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEec
Q 021956 109 WFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVV 165 (305)
Q Consensus 109 w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~ 165 (305)
-.++.|+.|++||+|+++-. .+|.++.+|++.- .. .-.|..|+.++.+-.
T Consensus 279 ~~~~~g~~V~~G~~La~i~d----~~v~a~~dG~~i~--~p-~p~V~~G~~~~~i~~ 328 (350)
T 2bco_A 279 DNVENFTSFVHGEVFGHDGD----KPLMAKNDNEAIV--FP-NRHVAIGQRAALMVC 328 (350)
T ss_dssp TTCCBTEECCTTCEEEEETT----EEEECSSSSCEEE--SC-CTTCCTTSEEEEEEE
T ss_pred ccccCCCEeCCCCEEEEECC----EEEEeCCCCEEEE--ec-CCCCCCCcEEEEEEE
Confidence 34789999999999999843 6889999998643 33 678899998877754
No 99
>2xhc_A Transcription antitermination protein NUSG; 2.45A {Thermotoga maritima}
Probab=81.04 E-value=0.4 Score=45.78 Aligned_cols=51 Identities=20% Similarity=0.255 Sum_probs=31.2
Q ss_pred ccCCCEEecCCeEE-------------EEecCceeeEEecCCCcEE----------EEEeeCCCCeeecCceEEE
Q 021956 111 VKEGDEIEEFQPLC-------------AVQSDKATIEITSRYKGKV----------AQLLHAPGNIVKVGETLLK 162 (305)
Q Consensus 111 v~eGD~V~~Gd~L~-------------eIEtdK~~~eI~Ap~~Gvv----------~~i~v~~Gd~V~vG~~La~ 162 (305)
+++|+.|+.||+|+ .+.-+|-.+.|+ +.+|.. ..++|++||.|+.|+.|+.
T Consensus 125 v~~g~~v~~G~vlak~~aiiaeidG~V~fg~~kr~i~i~-~~~g~~~eylip~~~~k~~~v~~Gd~V~~G~~l~d 198 (352)
T 2xhc_A 125 LRVGTKVKQGLPLSKNEEYICELDGKIVEIERMKKVVVQ-TPDGEQDVYYIPLDVFDRDRIKKGKEVKQGEMLAE 198 (352)
T ss_dssp CCTTCEECTTCBSBSSSSCBCCSCEEEEEEEEEEEEEEE-CTTSCEEEEEEEGGGCCTTTSCTTCEECTTCEEEC
T ss_pred cCCCCEEccCcEEecCceEEeccceEEEECCcEEEEEEE-CCCCCEEEEEEcCCCCcCeeeCCCCEEeCCCCccc
Confidence 89999999999887 111112222333 233322 2234678888999988875
No 100
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=80.83 E-value=0.95 Score=47.08 Aligned_cols=34 Identities=26% Similarity=0.259 Sum_probs=31.8
Q ss_pred eEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 133 IEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 133 ~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
..|.||..|+|.+++|++||.|+.||+|+.|+..
T Consensus 650 ~~v~ap~~G~V~~v~V~~Gd~V~~Gq~L~~iEam 683 (718)
T 3bg3_A 650 GQIGAPMPGKVIDIKVVAGAKVAKGQPLCVLSAM 683 (718)
T ss_dssp SCEECSSCEEEEEECSCTTCCBCTTCCCEEEESS
T ss_pred ceEeCCCCeEEEEEEeCCCCeeCCCCEEEEEecc
Confidence 5699999999999999999999999999999863
No 101
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=77.45 E-value=0.47 Score=46.30 Aligned_cols=31 Identities=19% Similarity=0.156 Sum_probs=0.0
Q ss_pred CceeEEEEEEccCCCEEecCCeEEEEecCce
Q 021956 101 IAECELLKWFVKEGDEIEEFQPLCAVQSDKA 131 (305)
Q Consensus 101 ~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~ 131 (305)
-.+|+|.++++++||.|..||+|+.|+.+..
T Consensus 51 p~~G~v~~i~v~~G~~V~~G~~l~~i~~~~~ 81 (428)
T 3dva_I 51 PVKGKVLEILVPEGTVATVGQTLITLDAPGY 81 (428)
T ss_dssp -------------------------------
T ss_pred CCCeEEEEEEeCCCCEeCCCCEEEEEecCCc
Confidence 3589999999999999999999999987543
No 102
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=76.29 E-value=0.99 Score=38.52 Aligned_cols=27 Identities=41% Similarity=0.439 Sum_probs=23.0
Q ss_pred eeEEEEEEccCCCEEecCCeEEEEecC
Q 021956 103 ECELLKWFVKEGDEIEEFQPLCAVQSD 129 (305)
Q Consensus 103 eG~I~~w~v~eGD~V~~Gd~L~eIEtd 129 (305)
+|+=-+.+|++||+|+.||+|+++.-+
T Consensus 92 ~G~gF~~~V~~Gd~V~~G~~L~~~d~~ 118 (162)
T 1ax3_A 92 KGEGFTSFVSEGDRVEPGQKLLEVDLD 118 (162)
T ss_dssp TTTTEEESCCCCSEECSEEEEEEECHH
T ss_pred CCCccEEEEeCCCEEcCCCEEEEECHH
Confidence 555568899999999999999999754
No 103
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=76.23 E-value=1.8 Score=47.20 Aligned_cols=34 Identities=15% Similarity=0.378 Sum_probs=28.4
Q ss_pred eEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 133 IEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 133 ~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
..|.||..|+|.++.+++||.|+.||+|+.|+..
T Consensus 1096 ~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~iEam 1129 (1165)
T 2qf7_A 1096 AHVGAPMPGVISRVFVSSGQAVNAGDVLVSIEAM 1129 (1165)
T ss_dssp TEEECSSCEEEEEECCSSCCCC---CEEEEEEC-
T ss_pred ceeeCCCCeEEEEEEcCCcCEeCCCCEEEEEEcc
Confidence 5699999999999999999999999999999853
No 104
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=75.99 E-value=0.54 Score=48.29 Aligned_cols=35 Identities=26% Similarity=0.438 Sum_probs=0.0
Q ss_pred eeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 132 TIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 132 ~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
...|.||..|+|.+++|++||.|+.||+|+.|+..
T Consensus 602 ~~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iEam 636 (675)
T 3u9t_A 602 QGGLSAPMNGSIVRVLVEPGQTVEAGATLVVLEAM 636 (675)
T ss_dssp -----------------------------------
T ss_pred CCeEECCCCEEEEEEEeCCCCEEcCCCEEEEEEec
Confidence 34689999999999999999999999999999864
No 105
>3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1
Probab=75.90 E-value=1.4 Score=38.37 Aligned_cols=28 Identities=11% Similarity=0.115 Sum_probs=23.4
Q ss_pred eeEEEEEEccCCCEEecCCeEEEEecCc
Q 021956 103 ECELLKWFVKEGDEIEEFQPLCAVQSDK 130 (305)
Q Consensus 103 eG~I~~w~v~eGD~V~~Gd~L~eIEtdK 130 (305)
+|+--+++|++||.|++||+|++++-++
T Consensus 114 ~G~gF~~~V~~Gd~Vk~Gd~L~~fD~~~ 141 (183)
T 3our_B 114 KGEGFTRIAEEGQTVKAGDTVIEFDLAL 141 (183)
T ss_dssp TTTTEEECSCTTCEECTTCEEEEECHHH
T ss_pred CCccceEEEeCcCEEcCCCEEEEECHHH
Confidence 3555589999999999999999997643
No 106
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=75.20 E-value=2.1 Score=36.42 Aligned_cols=27 Identities=15% Similarity=0.161 Sum_probs=22.2
Q ss_pred eeEEEEEEccCCCEEecCCeEEEEecC
Q 021956 103 ECELLKWFVKEGDEIEEFQPLCAVQSD 129 (305)
Q Consensus 103 eG~I~~w~v~eGD~V~~Gd~L~eIEtd 129 (305)
+|+=-+.+|++||+|+.||+|+++.-+
T Consensus 92 ~G~gF~~~V~~Gd~V~~G~~L~~~d~~ 118 (161)
T 1f3z_A 92 KGEGFKRIAEEGQRVKVGDTVIEFDLP 118 (161)
T ss_dssp TTTTEEECSCTTCEECTTCEEEEECHH
T ss_pred CCCccEEEEeCcCEECCCCEEEEECHH
Confidence 344457799999999999999999753
No 107
>3it5_A Protease LASA; metallopeptidase, beta-protein, cell membrane, cell out membrane, hydrolase, membrane, metal-binding; 2.00A {Pseudomonas aeruginosa} PDB: 3it7_A*
Probab=74.57 E-value=14 Score=31.60 Aligned_cols=64 Identities=9% Similarity=-0.094 Sum_probs=42.2
Q ss_pred ceEEEeecCC-----C---CCCceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCce
Q 021956 88 GIVDVPLAQT-----G---EGIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGET 159 (305)
Q Consensus 88 ~~~~i~lP~l-----g---es~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~ 159 (305)
.-++|..+.= + -...+|+|+..- |. .++|+.+.-...+.+- +.++.|++|+.|+.||+
T Consensus 33 ~GiDi~~~~G~~g~~gtpV~A~~~G~V~~~~---------G~-~V~I~H~~g~~t~Y~H----L~~i~V~~G~~V~~Gq~ 98 (182)
T 3it5_A 33 SSFDASYDWPRWGSATYSVVAAHAGTVRVLS---------RC-QVRVTHPSGWATNYYH----MDQIQVSNGQQVSADTK 98 (182)
T ss_dssp CEEEEESSCCCTTSCCCEEECSSSEEEEEEE---------TT-EEEEECTTSEEEEEES----EESCCCCTTCEECTTCE
T ss_pred ecEEecCCCCCCCCCCCEEEeccCEEEEEEC---------Ce-EEEEEECCcEEEEEEc----CCccccCCCCEEcCCCE
Confidence 3567776621 1 135678887753 33 4456665544445554 34678999999999999
Q ss_pred EEEEec
Q 021956 160 LLKLVV 165 (305)
Q Consensus 160 La~i~~ 165 (305)
|+.+..
T Consensus 99 IG~vG~ 104 (182)
T 3it5_A 99 LGVYAG 104 (182)
T ss_dssp EEEECS
T ss_pred EEeecC
Confidence 999975
No 108
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=70.85 E-value=0.86 Score=40.85 Aligned_cols=28 Identities=21% Similarity=0.203 Sum_probs=0.0
Q ss_pred ceeEEEEEEccCCCE-EecCCeEEEEecC
Q 021956 102 AECELLKWFVKEGDE-IEEFQPLCAVQSD 129 (305)
Q Consensus 102 ~eG~I~~w~v~eGD~-V~~Gd~L~eIEtd 129 (305)
.+|+|.++++++||. |..|++|+.|+.+
T Consensus 53 ~~G~v~~i~v~~G~~~V~~G~~l~~i~~~ 81 (229)
T 1zy8_K 53 DDGILAKIVVEEGSKNIRLGSLIGLIVEE 81 (229)
T ss_dssp -----------------------------
T ss_pred CCeEEEEEEecCCCeeecCCCEEEEEecc
Confidence 589999999999997 9999999999754
No 109
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=66.82 E-value=4.4 Score=38.48 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=29.2
Q ss_pred eeEEecCCCcEEEEEeeCCCCeeecCceEEEEec
Q 021956 132 TIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVV 165 (305)
Q Consensus 132 ~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~ 165 (305)
..-+.|+.+|++ ...++.|+.|+.||+|+.|..
T Consensus 290 ~~~v~A~~~Gl~-~~~v~lGd~V~kG~~la~I~d 322 (368)
T 3fmc_A 290 YRKFHAPKAGMV-EYLGKVGVPMKATDPLVNLLR 322 (368)
T ss_dssp EEEEECSSCEEE-EECSCTTCCBCTTCEEEEEEC
T ss_pred cEEEecCCCEEE-EEeCCCCCEeCCCCEEEEEEc
Confidence 345899999988 588999999999999999986
No 110
>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}
Probab=65.26 E-value=5.3 Score=37.25 Aligned_cols=36 Identities=14% Similarity=0.202 Sum_probs=30.1
Q ss_pred ceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 130 KATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 130 K~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
....-|.|+.+|.+ ...++.||.|+.|++|+.|..-
T Consensus 255 ~~~~~v~A~~~Gl~-~~~v~~Gd~V~~G~~la~I~dp 290 (331)
T 3na6_A 255 DGDCYLFSEHDGLF-EIMIDLGEPVQEGDLVARVWSP 290 (331)
T ss_dssp CSCCCEECSSCEEE-EESSCTTCEECTTCEEEEEECS
T ss_pred CCcEEEeCCCCeEE-EEcCCCCCEEcCCCEEEEEEcC
Confidence 33455899999977 5679999999999999999863
No 111
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=59.09 E-value=6.5 Score=36.19 Aligned_cols=24 Identities=13% Similarity=0.108 Sum_probs=21.4
Q ss_pred EEEEEEccCCCEEecCCeEEEEec
Q 021956 105 ELLKWFVKEGDEIEEFQPLCAVQS 128 (305)
Q Consensus 105 ~I~~w~v~eGD~V~~Gd~L~eIEt 128 (305)
.-++|++++|+.|+.||+|++|+.
T Consensus 71 ~~v~~~~~dG~~v~~g~~v~~i~G 94 (284)
T 1qpo_A 71 YRVLDRVEDGARVPPGEALMTLEA 94 (284)
T ss_dssp EEEEEECCTTCEECTTCEEEEEEE
T ss_pred EEEEEEcCCCCEecCCcEEEEEEE
Confidence 345899999999999999999985
No 112
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=57.22 E-value=6.2 Score=36.36 Aligned_cols=22 Identities=23% Similarity=0.311 Sum_probs=20.5
Q ss_pred EEEEccCCCEEecCCeEEEEec
Q 021956 107 LKWFVKEGDEIEEFQPLCAVQS 128 (305)
Q Consensus 107 ~~w~v~eGD~V~~Gd~L~eIEt 128 (305)
++|++++|+.|+.||+|++|+-
T Consensus 74 v~~~~~dG~~v~~g~~v~~i~G 95 (286)
T 1x1o_A 74 FTPLVAEGARVAEGTEVARVRG 95 (286)
T ss_dssp EEESSCTTCEECTTCEEEEEEE
T ss_pred EEEEcCCCCCccCCCEEEEEEE
Confidence 4899999999999999999985
No 113
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=56.05 E-value=6.2 Score=36.42 Aligned_cols=22 Identities=18% Similarity=0.336 Sum_probs=20.5
Q ss_pred EEEEccCCCEEecCCeEEEEec
Q 021956 107 LKWFVKEGDEIEEFQPLCAVQS 128 (305)
Q Consensus 107 ~~w~v~eGD~V~~Gd~L~eIEt 128 (305)
++|++++||.|+.||+|++|+.
T Consensus 73 v~~~~~dG~~v~~g~~v~~i~G 94 (285)
T 1o4u_A 73 SKFNVEDGEYLEGTGVIGEIEG 94 (285)
T ss_dssp EEESCCTTCEEESCEEEEEEEE
T ss_pred EEEEcCCCCCcCCCCEEEEEEE
Confidence 4899999999999999999986
No 114
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=55.92 E-value=6.8 Score=36.31 Aligned_cols=22 Identities=5% Similarity=0.418 Sum_probs=20.5
Q ss_pred EEEEccCCCEEecCCeEEEEec
Q 021956 107 LKWFVKEGDEIEEFQPLCAVQS 128 (305)
Q Consensus 107 ~~w~v~eGD~V~~Gd~L~eIEt 128 (305)
++|++++|+.|+.||+|++|+.
T Consensus 77 v~~~~~dG~~v~~g~~v~~i~G 98 (287)
T 3tqv_A 77 ITWLYSDAQKVPANARIFELKG 98 (287)
T ss_dssp EEESSCTTCEECTTCEEEEEEE
T ss_pred EEEEeCCCCEeeCCCEEEEEEE
Confidence 3899999999999999999985
No 115
>3it5_A Protease LASA; metallopeptidase, beta-protein, cell membrane, cell out membrane, hydrolase, membrane, metal-binding; 2.00A {Pseudomonas aeruginosa} PDB: 3it7_A*
Probab=55.31 E-value=4.8 Score=34.62 Aligned_cols=24 Identities=13% Similarity=0.131 Sum_probs=20.5
Q ss_pred EEEEEEccCCCEEecCCeEEEEec
Q 021956 105 ELLKWFVKEGDEIEEFQPLCAVQS 128 (305)
Q Consensus 105 ~I~~w~v~eGD~V~~Gd~L~eIEt 128 (305)
-+.++.|++||.|++||+|..+-.
T Consensus 81 HL~~i~V~~G~~V~~Gq~IG~vG~ 104 (182)
T 3it5_A 81 HMDQIQVSNGQQVSADTKLGVYAG 104 (182)
T ss_dssp SEESCCCCTTCEECTTCEEEEECS
T ss_pred cCCccccCCCCEEcCCCEEEeecC
Confidence 345678999999999999999875
No 116
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=55.26 E-value=15 Score=35.75 Aligned_cols=41 Identities=24% Similarity=0.292 Sum_probs=33.2
Q ss_pred ecCceeeEEecCCCcEEEEE-------------------------------eeCCCCeeecCceEEEEecCC
Q 021956 127 QSDKATIEITSRYKGKVAQL-------------------------------LHAPGNIVKVGETLLKLVVGD 167 (305)
Q Consensus 127 EtdK~~~eI~Ap~~Gvv~~i-------------------------------~v~~Gd~V~vG~~La~i~~~~ 167 (305)
...+...+|.|+.+|+|..+ +.+.||.|..|++|+.|-...
T Consensus 330 ~~~~~~~~v~a~~~G~v~~i~~~~~g~~~~~lGagr~~~~d~~d~~~Gi~~~~k~g~~v~~g~~l~~i~~~~ 401 (433)
T 1brw_A 330 PKAAYTSTVTAAADGYVAEMAADDIGTAAMWLGAGRAKKEDVIDLAVGIVLHKKIGDRVQKGEALATIHSNR 401 (433)
T ss_dssp CCCSEEEEEECSSSEEEEEECHHHHHHHHHHHTTSCSSTTCCCCTTCEEEESCCTTCEECTTCEEEEEEESS
T ss_pred CCCCeEEEEecCCCeEEEEechHHHHHHHHHcCCCcCCCCCCCCcCcCeeEeccCCCEECCCCeEEEEEcCC
Confidence 44566788888888888776 556899999999999998654
No 117
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=55.19 E-value=8.4 Score=35.03 Aligned_cols=22 Identities=9% Similarity=0.163 Sum_probs=20.3
Q ss_pred EEEEccCCCEEecCCeEEEEec
Q 021956 107 LKWFVKEGDEIEEFQPLCAVQS 128 (305)
Q Consensus 107 ~~w~v~eGD~V~~Gd~L~eIEt 128 (305)
++|++++|+.|..||+|++|+.
T Consensus 60 v~~~~~eG~~v~~g~~~~~v~G 81 (273)
T 2b7n_A 60 CVQTIKDKERFKPKDALMEIRG 81 (273)
T ss_dssp EEEECCTTCEECTTCEEEEEEE
T ss_pred EEEEcCCCCCcCCCCEEEEEEe
Confidence 3799999999999999999985
No 118
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=55.01 E-value=7.4 Score=36.31 Aligned_cols=23 Identities=17% Similarity=0.170 Sum_probs=20.9
Q ss_pred EEEEEccCCCEEecCCeEEEEec
Q 021956 106 LLKWFVKEGDEIEEFQPLCAVQS 128 (305)
Q Consensus 106 I~~w~v~eGD~V~~Gd~L~eIEt 128 (305)
-++|++++|+.|+.||+|++|+.
T Consensus 85 ~v~~~~~dG~~v~~g~~v~~i~G 107 (300)
T 3l0g_A 85 KYEIHKKDGDITGKNSTLVSGEA 107 (300)
T ss_dssp EEEECCCTTCEECSSCEEEEEEE
T ss_pred EEEEEeCCCCEeeCCCEEEEEEE
Confidence 34899999999999999999985
No 119
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=53.86 E-value=15 Score=35.73 Aligned_cols=40 Identities=23% Similarity=0.336 Sum_probs=32.5
Q ss_pred ecCceeeEEecCCCcEEEEE-------------------------------eeCCCCeeecCceEEEEecCC
Q 021956 127 QSDKATIEITSRYKGKVAQL-------------------------------LHAPGNIVKVGETLLKLVVGD 167 (305)
Q Consensus 127 EtdK~~~eI~Ap~~Gvv~~i-------------------------------~v~~Gd~V~vG~~La~i~~~~ 167 (305)
-..+ ..+|.|+.+|+|..+ +.+.||.|..|++|+.|-...
T Consensus 323 ~~a~-~~~v~a~~~G~v~~i~~~~~g~~~~~lGagr~~~~d~id~~~Gi~~~~k~g~~v~~g~~l~~i~~~~ 393 (423)
T 2dsj_A 323 PLAE-EHPLRAEREGVVREVDAYKVGLAVLALGGGRKRKGEPIDHGVGVYLLKKPGDRVERGEALALVYHRR 393 (423)
T ss_dssp CCCE-EEEEECSSCEEEEEECHHHHHHHHHHHTSSCSSTTCCCCTTCEEEESCCTTCEECTTSEEEEEEECS
T ss_pred CCCC-eEEEecCCCeEEEEechHHHHHHHHHcCCCcCcCCCCCCcCcCeeeeccCCCEeCCCCeEEEEEeCC
Confidence 3456 788889999988776 556899999999999998643
No 120
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=53.03 E-value=8 Score=36.00 Aligned_cols=22 Identities=23% Similarity=0.679 Sum_probs=20.5
Q ss_pred EEEEccCCCEEecCCeEEEEec
Q 021956 107 LKWFVKEGDEIEEFQPLCAVQS 128 (305)
Q Consensus 107 ~~w~v~eGD~V~~Gd~L~eIEt 128 (305)
.+|++++|+.|..||+|++|+.
T Consensus 88 v~~~~~dG~~v~~g~~l~~v~G 109 (298)
T 3gnn_A 88 VDWRHREGDRMSADSTVCELRG 109 (298)
T ss_dssp EEESSCTTCEECTTCEEEEEEE
T ss_pred EEEEcCCCCEecCCCEEEEEEe
Confidence 4899999999999999999985
No 121
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=52.63 E-value=15 Score=35.88 Aligned_cols=36 Identities=31% Similarity=0.433 Sum_probs=30.4
Q ss_pred CceeeEEecCCCcEEEEE-------------------------------eeCCCCeeecCceEEEEe
Q 021956 129 DKATIEITSRYKGKVAQL-------------------------------LHAPGNIVKVGETLLKLV 164 (305)
Q Consensus 129 dK~~~eI~Ap~~Gvv~~i-------------------------------~v~~Gd~V~vG~~La~i~ 164 (305)
.+...+|.|+.+|+|..| +++.||.|..|++|+.|-
T Consensus 335 a~~~~~v~a~~~G~v~~id~~~~g~~~~~lGagr~~~~d~id~~~Gi~l~~~~G~~V~~g~~l~~i~ 401 (436)
T 3h5q_A 335 AQYQIEYKAKKSGYVTELVSNDIGVASMMLGAGRLTKEDDIDLAVGIVLNKKIGDKVEEGESLLTIH 401 (436)
T ss_dssp CSEEEEEECSSCEEEEEECHHHHHHHHHHTTTSCSSTTCCCCTTCEEEESCCTTCEECTTSEEEEEE
T ss_pred CCeEEEEecCCCEEEEEechHHHHHHHHHcCCCcCCCCCCCCCCCceEEecCCcCEeCCCCeEEEEe
Confidence 456778888888888877 455999999999999998
No 122
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=51.64 E-value=18 Score=33.83 Aligned_cols=38 Identities=21% Similarity=0.168 Sum_probs=30.9
Q ss_pred ecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEec
Q 021956 127 QSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVV 165 (305)
Q Consensus 127 EtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~ 165 (305)
+..+...-+.|+.+|.+ +..++.|+.|+.|++|+.|..
T Consensus 262 ~~~~~~~~v~A~~~G~~-~~~~~~g~~V~~G~~La~i~d 299 (354)
T 3cdx_A 262 MVREADAYVMAPRTGLF-EPTHYVGEEVRTGETAGWIHF 299 (354)
T ss_dssp ECCCGGGEEECSSCEEE-EESCCTTCEECTTSEEEEEEC
T ss_pred eecCCcEEEECCCCEEE-EEeCCCCCEeCCCCEEEEEEC
Confidence 33345566899999965 677899999999999999986
No 123
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=51.53 E-value=8.8 Score=35.51 Aligned_cols=23 Identities=35% Similarity=0.637 Sum_probs=21.1
Q ss_pred EEEEEccCCCEEecCCeEEEEec
Q 021956 106 LLKWFVKEGDEIEEFQPLCAVQS 128 (305)
Q Consensus 106 I~~w~v~eGD~V~~Gd~L~eIEt 128 (305)
-++|++++|+.|..||+|++|+.
T Consensus 86 ~v~~~~~dG~~v~~g~~~~~v~G 108 (296)
T 1qap_A 86 RLTWHVDDGDAIHANQTVFELQG 108 (296)
T ss_dssp EEEESCCTTCEECTTCEEEEEEE
T ss_pred EEEEEcCCCCEecCCCEEEEEEE
Confidence 45899999999999999999986
No 124
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=51.24 E-value=8.8 Score=36.08 Aligned_cols=25 Identities=28% Similarity=0.676 Sum_probs=21.8
Q ss_pred eEEEEEEccCCCEEecCCeEEEEec
Q 021956 104 CELLKWFVKEGDEIEEFQPLCAVQS 128 (305)
Q Consensus 104 G~I~~w~v~eGD~V~~Gd~L~eIEt 128 (305)
+.-++|++++|+.|..||+|++|+.
T Consensus 107 ~~~v~~~~~dG~~v~~g~~l~~v~G 131 (320)
T 3paj_A 107 QVSIEWHVQDGDTLTPNQTLCTLTG 131 (320)
T ss_dssp CCEEEESSCTTCEECTTCEEEEEEE
T ss_pred CeEEEEEeCCCCEecCCCEEEEEEe
Confidence 3345899999999999999999985
No 125
>3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis}
Probab=50.28 E-value=17 Score=31.17 Aligned_cols=41 Identities=20% Similarity=0.076 Sum_probs=31.3
Q ss_pred EEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecCC
Q 021956 116 EIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVGD 167 (305)
Q Consensus 116 ~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~~ 167 (305)
.+++|+-|+.++. .|+..-+.+.+|++|..|+.||.+.+..
T Consensus 95 ~lkkGt~L~lvpa-----------eG~~V~~i~~~G~rV~kgd~lA~i~T~K 135 (169)
T 3d4r_A 95 YLKAGTKLISVPA-----------EGYKVYPIMDFGFRVLKGYRLATLESKK 135 (169)
T ss_dssp EECTTCBCEEEEE-----------CSSEEEECCCCSEEECTTCEEEEEECTT
T ss_pred EEcCCCEEEEEEe-----------CceEEEEEcCcCcEeccCCeEEEEEecC
Confidence 3556677777765 4555577889999999999999998743
No 126
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=50.19 E-value=13 Score=36.39 Aligned_cols=41 Identities=15% Similarity=0.174 Sum_probs=33.0
Q ss_pred EecCceeeEEecCCCcEEEEE-------------------------------eeCCCCeeecCceEEEEecC
Q 021956 126 VQSDKATIEITSRYKGKVAQL-------------------------------LHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 126 IEtdK~~~eI~Ap~~Gvv~~i-------------------------------~v~~Gd~V~vG~~La~i~~~ 166 (305)
+...+...+|.|+.+|+|..+ +++.||.|..|++|+.|-..
T Consensus 334 ~~~a~~~~~v~a~~~G~v~~i~~~~~g~~~~~lGagr~~~~d~id~~~Gi~~~~k~g~~v~~g~~l~~i~~~ 405 (440)
T 2tpt_A 334 LPTAMLTKAVYADTEGFVSEMDTRALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQVDGQRPLAVIHAK 405 (440)
T ss_dssp SCCCSEEEEECCSSCEEEEEECHHHHHHHHHHHTTSCSSTTCCCCSSCEEESCCCTTCEEBTTBCSEEEEES
T ss_pred CCCCCeEEEEecCCCEEEEEechHHHHHHHHHcCCCcCCCCCCCCcCcCeeEeccCCCEECCCCeEEEEecC
Confidence 334566778888899988776 55689999999999999864
No 127
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=50.12 E-value=9.6 Score=37.15 Aligned_cols=30 Identities=23% Similarity=0.231 Sum_probs=24.6
Q ss_pred CceeEEEEEEccCCCEEecCCeEEEEecCc
Q 021956 101 IAECELLKWFVKEGDEIEEFQPLCAVQSDK 130 (305)
Q Consensus 101 ~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK 130 (305)
++-+.=+.++++.||.|++||+|++|=+++
T Consensus 364 id~~~Gi~~~~k~g~~v~~g~~l~~i~~~~ 393 (423)
T 2dsj_A 364 IDHGVGVYLLKKPGDRVERGEALALVYHRR 393 (423)
T ss_dssp CCTTCEEEESCCTTCEECTTSEEEEEEECS
T ss_pred CCcCcCeeeeccCCCEeCCCCeEEEEEeCC
Confidence 444555689999999999999999997654
No 128
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=49.81 E-value=9.5 Score=37.25 Aligned_cols=30 Identities=20% Similarity=0.282 Sum_probs=24.7
Q ss_pred CceeEEEEEEccCCCEEecCCeEEEEecCc
Q 021956 101 IAECELLKWFVKEGDEIEEFQPLCAVQSDK 130 (305)
Q Consensus 101 ~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK 130 (305)
++-+.=+.++++.||.|++||+|++|=+++
T Consensus 372 ~d~~~Gi~~~~k~g~~v~~g~~l~~i~~~~ 401 (433)
T 1brw_A 372 IDLAVGIVLHKKIGDRVQKGEALATIHSNR 401 (433)
T ss_dssp CCTTCEEEESCCTTCEECTTCEEEEEEESS
T ss_pred CCcCcCeeEeccCCCEECCCCeEEEEEcCC
Confidence 444555689999999999999999997654
No 129
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=47.22 E-value=11 Score=36.83 Aligned_cols=28 Identities=29% Similarity=0.246 Sum_probs=23.6
Q ss_pred CceeEEEEEEccCCCEEecCCeEEEEec
Q 021956 101 IAECELLKWFVKEGDEIEEFQPLCAVQS 128 (305)
Q Consensus 101 ~~eG~I~~w~v~eGD~V~~Gd~L~eIEt 128 (305)
++-+.=+.++++.||.|++||+|++|=.
T Consensus 375 id~~~Gi~l~~~~G~~V~~g~~l~~i~~ 402 (436)
T 3h5q_A 375 IDLAVGIVLNKKIGDKVEEGESLLTIHS 402 (436)
T ss_dssp CCTTCEEEESCCTTCEECTTSEEEEEEE
T ss_pred CCCCCceEEecCCcCEeCCCCeEEEEeC
Confidence 4555666899999999999999999873
No 130
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=46.94 E-value=10 Score=35.09 Aligned_cols=22 Identities=23% Similarity=0.655 Sum_probs=20.3
Q ss_pred EEEEccCCCEEecCCeEEEEec
Q 021956 107 LKWFVKEGDEIEEFQPLCAVQS 128 (305)
Q Consensus 107 ~~w~v~eGD~V~~Gd~L~eIEt 128 (305)
++|++++|+.|..||+|++|+.
T Consensus 73 v~~~~~dG~~v~~g~~l~~v~G 94 (299)
T 2jbm_A 73 VSWFLPEGSKLVPVARVAEVRG 94 (299)
T ss_dssp EEESSCTTCEECSSEEEEEEEE
T ss_pred EEEEcCCCCCCCCCCEEEEEEE
Confidence 3799999999999999999985
No 131
>3lu0_D DNA-directed RNA polymerase subunit beta'; E. coli RNA polymerase, nucleotidyltransferase, transcription, transferase; 11.20A {Escherichia coli} PDB: 3iyd_D*
Probab=46.55 E-value=5.6 Score=44.13 Aligned_cols=18 Identities=17% Similarity=0.244 Sum_probs=16.2
Q ss_pred EEccCCCEEecCCeEEEE
Q 021956 109 WFVKEGDEIEEFQPLCAV 126 (305)
Q Consensus 109 w~v~eGD~V~~Gd~L~eI 126 (305)
+.|++|+.|..||+|+.|
T Consensus 1107 ~~v~~g~~v~~g~vlaki 1124 (1407)
T 3lu0_D 1107 VQLEDGVQISSGDTLARI 1124 (1407)
T ss_dssp CCCCSSCEECTTCEEECC
T ss_pred EEecCCCEeccCceEEec
Confidence 468999999999999977
No 132
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=44.55 E-value=29 Score=34.23 Aligned_cols=42 Identities=19% Similarity=0.280 Sum_probs=33.3
Q ss_pred EecCceeeEEecCCCcEEEE-----------------------------EeeCCCCeeecCceEEEEecCC
Q 021956 126 VQSDKATIEITSRYKGKVAQ-----------------------------LLHAPGNIVKVGETLLKLVVGD 167 (305)
Q Consensus 126 IEtdK~~~eI~Ap~~Gvv~~-----------------------------i~v~~Gd~V~vG~~La~i~~~~ 167 (305)
+-..+...+|.|+.+|+|.. ++++.||.|..|++|+.|-...
T Consensus 366 l~~a~~~~~v~a~~~G~v~~id~~~~g~~~~~lG~gr~~~~id~~~Gi~l~~k~G~~V~~g~~l~~i~~~~ 436 (474)
T 1uou_A 366 LPRAREQEELLAPADGTVELVRALPLALVLHELGAGRAGEPLRLGVGAELLVDVGQRLRRGTPWLRVHRDG 436 (474)
T ss_dssp SCCCSEEEEEECSSCEEEEEECHHHHHHHHHHHHC------CCSSCEEEECSCTTCEECTTCEEEEEEESS
T ss_pred CCCCCeeEEEECCCCeEEEEecHHHHHHHHHHhCCCCcCCccCCCCceEEEccCCCEECCCCeEEEEEcCC
Confidence 34466677888888888854 4667999999999999998653
No 133
>2hsi_A Putative peptidase M23; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.90A {Pseudomonas aeruginosa PAO1}
Probab=43.69 E-value=10 Score=34.77 Aligned_cols=18 Identities=28% Similarity=0.087 Sum_probs=9.2
Q ss_pred eeCCCCeeecCceEEEEe
Q 021956 147 LHAPGNIVKVGETLLKLV 164 (305)
Q Consensus 147 ~v~~Gd~V~vG~~La~i~ 164 (305)
.|++|+.|+.|++|+.+.
T Consensus 233 ~V~~G~~V~~Gq~IG~vG 250 (282)
T 2hsi_A 233 DVKLGQQVPRGGVLGKVG 250 (282)
T ss_dssp CSCTTCEECTTCEEEECC
T ss_pred ccCCcCEECCCCEEEEEC
Confidence 445555555555555544
No 134
>3tuf_B Stage II sporulation protein Q; intercellular signalling, intercellular channel, sporulation engulfment and signalling, intercellular space; 2.26A {Bacillus subtilis} PDB: 3uz0_B
Probab=43.54 E-value=10 Score=34.20 Aligned_cols=25 Identities=20% Similarity=0.284 Sum_probs=18.7
Q ss_pred EEEEEEccCCCEEecCCeEEEEecC
Q 021956 105 ELLKWFVKEGDEIEEFQPLCAVQSD 129 (305)
Q Consensus 105 ~I~~w~v~eGD~V~~Gd~L~eIEtd 129 (305)
-+.++.|++||.|++||+|+.+-..
T Consensus 131 HL~~i~Vk~Gd~V~~Gq~IG~vG~t 155 (245)
T 3tuf_B 131 SLSEVSVEQGDKVKQNQVIGKSGKN 155 (245)
T ss_dssp EESEESCCTTCEECTTCEEEECBCC
T ss_pred cCCccccCCCCEECCCCEEEEeCCc
Confidence 3446778888888888888887654
No 135
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=43.23 E-value=15 Score=36.37 Aligned_cols=28 Identities=18% Similarity=0.137 Sum_probs=23.3
Q ss_pred eeEEEEEEccCCCEEecCCeEEEEecCc
Q 021956 103 ECELLKWFVKEGDEIEEFQPLCAVQSDK 130 (305)
Q Consensus 103 eG~I~~w~v~eGD~V~~Gd~L~eIEtdK 130 (305)
-+.=+.++++.||.|++||+|++|=+++
T Consensus 409 ~~~Gi~l~~k~G~~V~~g~~l~~i~~~~ 436 (474)
T 1uou_A 409 LGVGAELLVDVGQRLRRGTPWLRVHRDG 436 (474)
T ss_dssp SSCEEEECSCTTCEECTTCEEEEEEESS
T ss_pred CCCceEEEccCCCEECCCCeEEEEEcCC
Confidence 3444689999999999999999987653
No 136
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=42.72 E-value=25 Score=28.84 Aligned_cols=33 Identities=21% Similarity=0.157 Sum_probs=25.6
Q ss_pred EecCCCcEEEEEee-CCCCeeecCceEEEEecCC
Q 021956 135 ITSRYKGKVAQLLH-APGNIVKVGETLLKLVVGD 167 (305)
Q Consensus 135 I~Ap~~Gvv~~i~v-~~Gd~V~vG~~La~i~~~~ 167 (305)
+..+.-|.|..+.+ ++|+.|+.|++|+.|+...
T Consensus 39 ~a~~~lG~i~~V~lp~vGd~V~~Gd~l~~VEs~K 72 (136)
T 1zko_A 39 HAQEQLGDVVYVDLPEVGREVKKGEVVASIESVK 72 (136)
T ss_dssp HHHHHHCSEEEEECCCTTCEECTTCEEEEEEESS
T ss_pred hhcccCCCcEEEEecCCCCEEeCCCEEEEEEEcc
Confidence 34455566767766 8999999999999998643
No 137
>1qwy_A Peptidoglycan hydrolase; LYTM lysostaphin metalloprotease asparagine switch; 1.30A {Staphylococcus aureus subsp} SCOP: b.84.3.2 PDB: 2b0p_A 2b13_A* 2b44_A
Probab=42.40 E-value=11 Score=34.93 Aligned_cols=20 Identities=25% Similarity=0.300 Sum_probs=13.2
Q ss_pred EeeCCCCeeecCceEEEEec
Q 021956 146 LLHAPGNIVKVGETLLKLVV 165 (305)
Q Consensus 146 i~v~~Gd~V~vG~~La~i~~ 165 (305)
+.|++|+.|+.|++|+.+..
T Consensus 239 i~Vk~Gq~V~~GqvIG~vG~ 258 (291)
T 1qwy_A 239 LTVSAGDKVKAGDQIAYSGS 258 (291)
T ss_dssp ECCCTTCEECTTCEEEECCC
T ss_pred cccCCcCEECCCCEEEEECC
Confidence 45667777777777776654
No 138
>3tuf_B Stage II sporulation protein Q; intercellular signalling, intercellular channel, sporulation engulfment and signalling, intercellular space; 2.26A {Bacillus subtilis} PDB: 3uz0_B
Probab=38.86 E-value=47 Score=29.78 Aligned_cols=58 Identities=10% Similarity=-0.017 Sum_probs=37.8
Q ss_pred CCceeEEEEEEccCCCEEecCCeEEEEecCceeeEEecCCCcEEEEEeeCCCCeeecCceEEEEecC
Q 021956 100 GIAECELLKWFVKEGDEIEEFQPLCAVQSDKATIEITSRYKGKVAQLLHAPGNIVKVGETLLKLVVG 166 (305)
Q Consensus 100 s~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~~ 166 (305)
...+|+|+.+....| -|- ++.|+-..-...+.+. +.++.|+.|+.|..|++|+.+...
T Consensus 98 A~~~G~V~~~g~~~~----~G~-~ViI~Hg~G~~t~Y~H----L~~i~Vk~Gd~V~~Gq~IG~vG~t 155 (245)
T 3tuf_B 98 ASLSGTVVKAEKDPV----LGY-VVEVEHADGLSTVYQS----LSEVSVEQGDKVKQNQVIGKSGKN 155 (245)
T ss_dssp CSSCEEEEEEEEETT----TEE-EEEEECSTTEEEEEEE----ESEESCCTTCEECTTCEEEECBCC
T ss_pred eCcCeEEEEEEecCC----Cce-EEEEEeCCCEEEEEec----CCccccCCCCEECCCCEEEEeCCc
Confidence 345788877654432 232 3445554444444443 446789999999999999998764
No 139
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=37.91 E-value=14 Score=36.08 Aligned_cols=31 Identities=16% Similarity=0.311 Sum_probs=25.2
Q ss_pred CceeEEEEEEccCCCEEecCCeEEEEecCce
Q 021956 101 IAECELLKWFVKEGDEIEEFQPLCAVQSDKA 131 (305)
Q Consensus 101 ~~eG~I~~w~v~eGD~V~~Gd~L~eIEtdK~ 131 (305)
++-+.=+.++++.||.|++||+|++|=+++.
T Consensus 377 id~~~Gi~~~~k~g~~v~~g~~l~~i~~~~~ 407 (440)
T 2tpt_A 377 IDYSVGFTDMARLGDQVDGQRPLAVIHAKDE 407 (440)
T ss_dssp CCSSCEEESCCCTTCEEBTTBCSEEEEESSH
T ss_pred CCcCcCeeEeccCCCEECCCCeEEEEecCCH
Confidence 4445556899999999999999999977543
No 140
>1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A*
Probab=37.36 E-value=42 Score=27.21 Aligned_cols=30 Identities=20% Similarity=0.145 Sum_probs=24.9
Q ss_pred cCCCcEEEEEee-CCCCeeecCceEEEEecC
Q 021956 137 SRYKGKVAQLLH-APGNIVKVGETLLKLVVG 166 (305)
Q Consensus 137 Ap~~Gvv~~i~v-~~Gd~V~vG~~La~i~~~ 166 (305)
.+.-|.|..+.+ ++|+.|..|++|+.|+..
T Consensus 32 ~~~lG~i~~v~lp~~G~~V~~g~~l~~vEs~ 62 (131)
T 1hpc_A 32 QDHLGEVVFVELPEPGVSVTKGKGFGAVESV 62 (131)
T ss_dssp HHHHCSEEEEECCCTTCEECBTSEEEEEEES
T ss_pred cccCCCceEEEecCCCCEEeCCCEEEEEEec
Confidence 455577777777 899999999999999864
No 141
>3nyy_A Putative glycyl-glycine endopeptidase LYTM; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE 2PE SO4; 1.60A {Ruminococcus gnavus}
Probab=36.77 E-value=15 Score=33.11 Aligned_cols=18 Identities=28% Similarity=0.235 Sum_probs=8.8
Q ss_pred eeCCCCeeecCceEEEEe
Q 021956 147 LHAPGNIVKVGETLLKLV 164 (305)
Q Consensus 147 ~v~~Gd~V~vG~~La~i~ 164 (305)
.|++|+.|+.|++|+.+.
T Consensus 183 ~V~~G~~V~~Gq~IG~vG 200 (252)
T 3nyy_A 183 ELEKGDPVKAGDLLGYMG 200 (252)
T ss_dssp SCCTTCEECTTCEEEECB
T ss_pred cCCCCCEECCCCEEEEEC
Confidence 344555555555555444
No 142
>3nyy_A Putative glycyl-glycine endopeptidase LYTM; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE 2PE SO4; 1.60A {Ruminococcus gnavus}
Probab=34.46 E-value=64 Score=28.93 Aligned_cols=24 Identities=17% Similarity=0.200 Sum_probs=18.6
Q ss_pred EEEEE-EccCCCEEecCCeEEEEec
Q 021956 105 ELLKW-FVKEGDEIEEFQPLCAVQS 128 (305)
Q Consensus 105 ~I~~w-~v~eGD~V~~Gd~L~eIEt 128 (305)
-+.++ .|++||.|++||+|+.+-.
T Consensus 177 HL~~~~~V~~G~~V~~Gq~IG~vG~ 201 (252)
T 3nyy_A 177 HLDSYAELEKGDPVKAGDLLGYMGD 201 (252)
T ss_dssp EESEECSCCTTCEECTTCEEEECBC
T ss_pred eCCCCCcCCCCCEECCCCEEEEECC
Confidence 33455 7899999999999988764
No 143
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=34.18 E-value=19 Score=33.09 Aligned_cols=22 Identities=23% Similarity=0.517 Sum_probs=20.1
Q ss_pred EEEEccCCCEEecC------CeEEEEec
Q 021956 107 LKWFVKEGDEIEEF------QPLCAVQS 128 (305)
Q Consensus 107 ~~w~v~eGD~V~~G------d~L~eIEt 128 (305)
++|++++|+.|..| |+|++|+.
T Consensus 69 v~~~~~eG~~v~~g~~~~~~~~l~~v~G 96 (294)
T 3c2e_A 69 VEWLFKEGSFLEPSKNDSGKIVVAKITG 96 (294)
T ss_dssp EEESSCTTCEECGGGSSSSCEEEEEEEE
T ss_pred EEEEeCCCCEeCCCCCCCCCcEEEEEEE
Confidence 37999999999999 99999985
No 144
>2gu1_A Zinc peptidase; alpha/beta, beta barrel, structural genomics, PSI, protein structure initiative; 1.90A {Vibrio cholerae}
Probab=33.52 E-value=20 Score=33.61 Aligned_cols=22 Identities=23% Similarity=0.320 Sum_probs=16.6
Q ss_pred EeeCCCCeeecCceEEEEecCC
Q 021956 146 LLHAPGNIVKVGETLLKLVVGD 167 (305)
Q Consensus 146 i~v~~Gd~V~vG~~La~i~~~~ 167 (305)
+.|+.|+.|+.|++|+.+...+
T Consensus 284 ~~v~~G~~V~~G~~Ig~~G~tg 305 (361)
T 2gu1_A 284 ILVKKGQLVKRGQKIALAGATG 305 (361)
T ss_dssp ECCCTTCEECTTCEEEECCCCS
T ss_pred cccCCcCEECCCCEEEEECCCC
Confidence 5677888888888888876544
No 145
>1yw4_A Succinylglutamate desuccinylase; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.00A {Chromobacterium violaceum} SCOP: c.56.5.7
Probab=31.92 E-value=9.9 Score=35.54 Aligned_cols=35 Identities=6% Similarity=-0.185 Sum_probs=24.8
Q ss_pred EccCCCEEecCCeEEEEecC-----ceeeEEecCCCcEEE
Q 021956 110 FVKEGDEIEEFQPLCAVQSD-----KATIEITSRYKGKVA 144 (305)
Q Consensus 110 ~v~eGD~V~~Gd~L~eIEtd-----K~~~eI~Ap~~Gvv~ 144 (305)
.++.|+.|++||+|+++-.. ....+|.+|.+|+|.
T Consensus 278 ~~~~g~~V~~G~~La~i~d~~~~~g~~~~~i~aP~~Gvv~ 317 (341)
T 1yw4_A 278 SVENFTLLPDGMLIAEDGAVRYQATGGEERILFPNPAVKP 317 (341)
T ss_dssp TCCBTEECCSSCCCC--------CCSSCCEEESCCTTCCS
T ss_pred cCCCcCEeCCCCEEEEECCCceEeCCCceEEEeCCCCcee
Confidence 45899999999999987543 235569999999874
No 146
>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}
Probab=31.45 E-value=38 Score=31.10 Aligned_cols=32 Identities=16% Similarity=0.023 Sum_probs=27.7
Q ss_pred eEEecCCCcEEEEEeeCCCCeeecCceEEEEec
Q 021956 133 IEITSRYKGKVAQLLHAPGNIVKVGETLLKLVV 165 (305)
Q Consensus 133 ~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~ 165 (305)
.-+.|+..|.+. ..++.|+.|+.|++|+.+..
T Consensus 258 ~~~~a~~~G~~~-~~~~~g~~V~~G~~la~i~d 289 (332)
T 2qj8_A 258 DQLKSPSPGIFE-PRCSVMDEVEQGDVVGVLHP 289 (332)
T ss_dssp GEEECSSSEEEE-ECSCTTCEECTTCEEEEEEC
T ss_pred eEEeCCCCeEEE-EeCCCCCEeCCCCEEEEEEC
Confidence 357899999775 77889999999999999975
No 147
>3csq_A Morphogenesis protein 1; hydrolase, infection, late protein; 1.80A {Bacteriophage phi-29}
Probab=31.26 E-value=16 Score=34.06 Aligned_cols=22 Identities=5% Similarity=-0.031 Sum_probs=18.7
Q ss_pred EEEccCCCEEecCCeEEEEecC
Q 021956 108 KWFVKEGDEIEEFQPLCAVQSD 129 (305)
Q Consensus 108 ~w~v~eGD~V~~Gd~L~eIEtd 129 (305)
++.|++||.|++||+|+.+-+.
T Consensus 250 ~~~V~~G~~V~~Gq~Ig~~G~t 271 (334)
T 3csq_A 250 PLPFDVGKKLKKGDLMGHTGIG 271 (334)
T ss_dssp SCCCCTTCEECTTSEEEECBCC
T ss_pred cccCCCcCEECCCCEEEeecCC
Confidence 4579999999999999988654
No 148
>2riq_A Poly [ADP-ribose] polymerase 1; Zn-binding domain, Zn ribbon, Zn finger, ADP-ribosylation, D damage, DNA repair, DNA-binding, glycosyltransferase; 1.70A {Homo sapiens} PDB: 2jvn_A
Probab=30.55 E-value=15 Score=31.12 Aligned_cols=21 Identities=24% Similarity=0.751 Sum_probs=15.7
Q ss_pred eeccCCCceEeeecccc-cccCC
Q 021956 284 TVPLRFPQYWNCNGYST-WSSCT 305 (305)
Q Consensus 284 ~vP~rg~~~~~~~~~~~-~~~~~ 305 (305)
++=+.| +.+.|+||-+ |+.|+
T Consensus 87 ~l~y~~-~~Y~C~G~isewtkC~ 108 (160)
T 2riq_A 87 QLVFKS-DAYYCTGDVTAWTKCM 108 (160)
T ss_dssp CEEEET-TEEEECCEEETTEECC
T ss_pred EEEEeC-CeEEECCCCCCcccCc
Confidence 355677 5666999876 99996
No 149
>3vr4_A V-type sodium ATPase catalytic subunit A; V-ATPase, rotary motor, P-loop, hydrolas ATPase, ATP binding; HET: MSE B3P; 2.17A {Enterococcus hirae} PDB: 3vr3_A* 3vr2_A* 3vr5_A 3vr6_A*
Probab=29.61 E-value=86 Score=31.88 Aligned_cols=53 Identities=19% Similarity=0.312 Sum_probs=38.6
Q ss_pred EccCCCEEecCCeEEEEecCce-eeEE--ecCCCcEEEEEeeCCCCeeecCceEEEEec
Q 021956 110 FVKEGDEIEEFQPLCAVQSDKA-TIEI--TSRYKGKVAQLLHAPGNIVKVGETLLKLVV 165 (305)
Q Consensus 110 ~v~eGD~V~~Gd~L~eIEtdK~-~~eI--~Ap~~Gvv~~i~v~~Gd~V~vG~~La~i~~ 165 (305)
.+++||.|..||++.+|+-... ...| .....|+|+.+ .+| ...+.++++.++.
T Consensus 130 ~~~~Gd~v~~g~i~g~v~e~~~i~h~im~pp~~~g~v~~i--~~g-~~~v~~~v~~i~~ 185 (600)
T 3vr4_A 130 TIEEGTEVSAGDIIGYVDETKIIQHKIMVPNGIKGTVQKI--ESG-SFTIDDPICVIET 185 (600)
T ss_dssp CSCTTCEECTTCEEEEEECSSSCEEEEECCTTCCEEEEEE--CCE-EECTTSCCEEEEE
T ss_pred ccccCCEecCCceEEEEecCCceeeeeecCCCCCceEEEe--cCC-cceeceeEEEEec
Confidence 4799999999999999865432 3444 33468999887 444 5577788888864
No 150
>2auk_A DNA-directed RNA polymerase beta' chain; sandwich-barrel hybrid motif, transferase; 2.30A {Escherichia coli}
Probab=28.85 E-value=28 Score=30.01 Aligned_cols=20 Identities=15% Similarity=0.182 Sum_probs=16.1
Q ss_pred EEEccCCCEEecCCeEEEEe
Q 021956 108 KWFVKEGDEIEEFQPLCAVQ 127 (305)
Q Consensus 108 ~w~v~eGD~V~~Gd~L~eIE 127 (305)
.+.|++||.|..||+|+.+-
T Consensus 167 ~i~v~dG~~V~~GdvLArip 186 (190)
T 2auk_A 167 IVQLEDGVQISSGDTLARIP 186 (190)
T ss_dssp EESSCTTCEECTTCEEEEEE
T ss_pred EEEEcCCCEEcCCCEEEEcc
Confidence 45688899999999998774
No 151
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=27.79 E-value=38 Score=28.46 Aligned_cols=32 Identities=13% Similarity=0.222 Sum_probs=24.4
Q ss_pred cChHHHHHHHHhCCCccccccCCCCCceehHHHHHH
Q 021956 204 ATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKY 239 (305)
Q Consensus 204 AsPaaRklA~e~gIDLs~V~GTG~~GRItkeDV~~~ 239 (305)
+.|.++++++++|||++.-. --.|+.+|+..|
T Consensus 68 ~d~~a~~~l~~~Gid~s~h~----ar~l~~~d~~~~ 99 (173)
T 4etm_A 68 PHEGTQEILRREGISFDGML----ARQVSEQDLDDF 99 (173)
T ss_dssp CCHHHHHHHHHTTCCCTTCC----CCBCCHHHHHHC
T ss_pred CCHHHHHHHHHCCccccCCc----cccCCHhhcCCC
Confidence 57999999999999998543 235788887554
No 152
>1onl_A Glycine cleavage system H protein; hybrid barrel-sandwich structure, structural genomics, riken structural genomics/proteomics initiative; 2.50A {Thermus thermophilus} SCOP: b.84.1.1
Probab=25.45 E-value=47 Score=26.77 Aligned_cols=30 Identities=20% Similarity=0.205 Sum_probs=23.7
Q ss_pred CCCcEEEEEee-CCCCeeecCceEEEEecCC
Q 021956 138 RYKGKVAQLLH-APGNIVKVGETLLKLVVGD 167 (305)
Q Consensus 138 p~~Gvv~~i~v-~~Gd~V~vG~~La~i~~~~ 167 (305)
+.-|.|..+.+ ++|+.|..|++|+.|+...
T Consensus 33 ~~lG~i~~v~lp~vG~~V~~g~~l~~vEs~K 63 (128)
T 1onl_A 33 DALGDVVYVELPEVGRVVEKGEAVAVVESVK 63 (128)
T ss_dssp HHHCSEEEEECBCTTCEECTTCEEEEEEESS
T ss_pred hcCCCceEEEecCCCCEEeCCCEEEEEEEcc
Confidence 44466666665 8999999999999998643
No 153
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=24.99 E-value=53 Score=26.07 Aligned_cols=31 Identities=10% Similarity=0.111 Sum_probs=23.3
Q ss_pred cChHHHHHHHHhCCCccccccCCCCCceehHHHHH
Q 021956 204 ATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLK 238 (305)
Q Consensus 204 AsPaaRklA~e~gIDLs~V~GTG~~GRItkeDV~~ 238 (305)
+.|.+.++++++|||++.-. --.++.+|+..
T Consensus 44 ~~p~a~~~l~~~Gid~s~~~----ar~l~~~~~~~ 74 (131)
T 1jf8_A 44 VNPKAIEAMKEVDIDISNHT----SDLIDNDILKQ 74 (131)
T ss_dssp CCHHHHHHHHHTTCCCTTCC----CCBCCHHHHHH
T ss_pred CCHHHHHHHHHcCCCcccCc----cccCChHHhcc
Confidence 57999999999999997532 23477777654
No 154
>2lmc_B DNA-directed RNA polymerase subunit beta; transferase, transcription; NMR {Escherichia coli k-12}
Probab=24.91 E-value=35 Score=25.83 Aligned_cols=36 Identities=22% Similarity=0.116 Sum_probs=24.0
Q ss_pred EEEEecCc-eeeEEecCCCcEEEEEeeCCCCeeecCceEE
Q 021956 123 LCAVQSDK-ATIEITSRYKGKVAQLLHAPGNIVKVGETLL 161 (305)
Q Consensus 123 L~eIEtdK-~~~eI~Ap~~Gvv~~i~v~~Gd~V~vG~~La 161 (305)
|..++.|. ...+..-|..- .++|++||.|..|+.|.
T Consensus 46 i~I~~~dG~e~~eY~Ip~~~---~l~V~eGd~V~~G~~Lt 82 (84)
T 2lmc_B 46 LVITPVDGSDPYEEMIPKWR---QLNVFEGERVERGDVIS 82 (84)
T ss_dssp EEEEESSSSCCEEEECCTTS---CCSSCTTEEECBSCSSB
T ss_pred EEEEECCCCeEEEEECCCCC---ceEeCCCCEECCCCCcc
Confidence 34444443 45556666665 45799999999999774
No 155
>3a7l_A H-protein, glycine cleavage system H protein; lipoic acid, lipoyl, transport protein; 1.30A {Escherichia coli} PDB: 3a7a_B 3ab9_A* 3a8i_E* 3a8j_E* 3a8k_E*
Probab=24.79 E-value=49 Score=26.65 Aligned_cols=31 Identities=13% Similarity=0.068 Sum_probs=24.2
Q ss_pred cCCCcEEEEEee-CCCCeeecCceEEEEecCC
Q 021956 137 SRYKGKVAQLLH-APGNIVKVGETLLKLVVGD 167 (305)
Q Consensus 137 Ap~~Gvv~~i~v-~~Gd~V~vG~~La~i~~~~ 167 (305)
.+.-|.|..+.+ ++|+.|..|++|+.|+...
T Consensus 33 ~~~lG~i~~v~lp~vG~~V~~g~~l~~vEs~K 64 (128)
T 3a7l_A 33 QELLGDMVFVDLPEVGATVSAGDDCAVAESVK 64 (128)
T ss_dssp HHHHCSEEEEECCCTTCEECTTCEEEEEEESS
T ss_pred hccCCceEEEEecCCCCEEeCCCEEEEEEecc
Confidence 344466766666 8999999999999998643
No 156
>1qwy_A Peptidoglycan hydrolase; LYTM lysostaphin metalloprotease asparagine switch; 1.30A {Staphylococcus aureus subsp} SCOP: b.84.3.2 PDB: 2b0p_A 2b13_A* 2b44_A
Probab=24.44 E-value=1.1e+02 Score=28.10 Aligned_cols=24 Identities=17% Similarity=0.153 Sum_probs=19.0
Q ss_pred EEEEEccCCCEEecCCeEEEEecC
Q 021956 106 LLKWFVKEGDEIEEFQPLCAVQSD 129 (305)
Q Consensus 106 I~~w~v~eGD~V~~Gd~L~eIEtd 129 (305)
+.++.|++||.|++||+|+.+-..
T Consensus 236 Ls~i~Vk~Gq~V~~GqvIG~vG~T 259 (291)
T 1qwy_A 236 NNRLTVSAGDKVKAGDQIAYSGST 259 (291)
T ss_dssp ESEECCCTTCEECTTCEEEECCCC
T ss_pred CCccccCCcCEECCCCEEEEECCC
Confidence 346788999999999999987653
No 157
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=22.00 E-value=59 Score=26.67 Aligned_cols=33 Identities=6% Similarity=-0.188 Sum_probs=25.0
Q ss_pred ccChHHHHHHHHhCCCccccccCCCCCceehHHHHHH
Q 021956 203 LATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKY 239 (305)
Q Consensus 203 ~AsPaaRklA~e~gIDLs~V~GTG~~GRItkeDV~~~ 239 (305)
.+.|.+.++++|+|||++.-. --.++.+|+..|
T Consensus 61 ~~dp~a~~vl~e~Gidis~h~----ar~l~~~~~~~~ 93 (148)
T 3rh0_A 61 GLNQLSVESIAEVGADMSQGI----PKAIDPELLRTV 93 (148)
T ss_dssp SCCHHHHHHHHHTTCCCTTCC----CCBCCHHHHHHC
T ss_pred CCCHHHHHHHHHcCCCcCCCe----eeECCHHHhcCC
Confidence 357999999999999997532 335888887654
No 158
>2gu1_A Zinc peptidase; alpha/beta, beta barrel, structural genomics, PSI, protein structure initiative; 1.90A {Vibrio cholerae}
Probab=21.96 E-value=1.5e+02 Score=27.63 Aligned_cols=23 Identities=22% Similarity=0.231 Sum_probs=18.9
Q ss_pred EEEEccCCCEEecCCeEEEEecC
Q 021956 107 LKWFVKEGDEIEEFQPLCAVQSD 129 (305)
Q Consensus 107 ~~w~v~eGD~V~~Gd~L~eIEtd 129 (305)
.++.|++||.|++||+|+.+-+.
T Consensus 282 ~~~~v~~G~~V~~G~~Ig~~G~t 304 (361)
T 2gu1_A 282 DKILVKKGQLVKRGQKIALAGAT 304 (361)
T ss_dssp SEECCCTTCEECTTCEEEECCCC
T ss_pred CccccCCcCEECCCCEEEEECCC
Confidence 35679999999999999988654
No 159
>2kng_A Protein LSR2; DNA-binding domain, immune response, DNA binding protein; NMR {Mycobacterium tuberculosis}
Probab=21.60 E-value=1e+02 Score=21.60 Aligned_cols=32 Identities=22% Similarity=0.385 Sum_probs=27.0
Q ss_pred ChHHHHHHHHhCCCccccccCCCCCceehHHHHHHHHh
Q 021956 205 TPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLKYAVQ 242 (305)
Q Consensus 205 sPaaRklA~e~gIDLs~V~GTG~~GRItkeDV~~~~~~ 242 (305)
+-++|.-|+++|++.++ .|||.++=+++|..+
T Consensus 15 ~~aIR~WAr~nG~~Vsd------RGRIp~~V~eAY~aA 46 (55)
T 2kng_A 15 SAAIREWARRNGHNVST------RGRIPADVIDAYHAA 46 (55)
T ss_dssp HHHHHHHHHHTTCCCCS------SSCCCHHHHHHHHHH
T ss_pred hHHHHHHHHHcCCcCCC------CCCCCHHHHHHHHHc
Confidence 45899999999998874 589999999988754
No 160
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=20.41 E-value=67 Score=26.80 Aligned_cols=31 Identities=16% Similarity=0.085 Sum_probs=23.2
Q ss_pred cChHHHHHHHHhCCCccccccCCCCCceehHHHHH
Q 021956 204 ATPTVRNLAKLYGINLYDVDATGKDGRVLKEDVLK 238 (305)
Q Consensus 204 AsPaaRklA~e~gIDLs~V~GTG~~GRItkeDV~~ 238 (305)
+.|.+.++++++|||++.-. --.++.+|+..
T Consensus 65 ~~p~a~~vl~e~Gid~s~~~----sr~l~~~~~~~ 95 (167)
T 2fek_A 65 ADPTAISVAAEHQLSLEGHC----ARQISRRLCRN 95 (167)
T ss_dssp CCHHHHHHHHHTTCCCTTCC----CCBCCHHHHHH
T ss_pred CCHHHHHHHHHcCCCccCCc----CccCCHHHhcc
Confidence 57999999999999997532 23477777643
Done!