BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021961
(305 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O82314|U082_ARATH Probable transcriptional regulatory protein At2g25830
OS=Arabidopsis thaliana GN=At2g25830 PE=2 SV=2
Length = 331
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/307 (68%), Positives = 239/307 (77%), Gaps = 20/307 (6%)
Query: 1 MGSHSSTRAVGAILHRISNGVSSKWSPNSFALSKHGLLSRNLFSSASSISSWIPLYEVKH 60
M SH S R IL R SNGVSS+ NS + H LLS + ++ SS+SS P H
Sbjct: 1 MASHCSMRV---ILLRFSNGVSSRSILNS---TNHRLLSLTMTNTLSSLSSISPHTTTSH 54
Query: 61 ------------C--NFQVRTIRTFAPVCMGRRSSKIAGRKGAQDAKKAKLYSRMGKEVI 106
C Q+R I P+CMGRRSSKIAGRKGAQD+KKAKLY R+GKEV+
Sbjct: 55 FTAASQQSDDQNCFRKLQLRKISISTPLCMGRRSSKIAGRKGAQDSKKAKLYCRIGKEVV 114
Query: 107 SAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVYGYGG 166
SAVKKGGPNP SNT LA +L+KAKELDVPKDIVERNIKRASEKGQEAFIEK+YEVYGYGG
Sbjct: 115 SAVKKGGPNPVSNTTLATILDKAKELDVPKDIVERNIKRASEKGQEAFIEKIYEVYGYGG 174
Query: 167 VSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLD 226
VS+VVEVLTDKI RSVAA+R VVKD GGKMAD GSVMFKF+R RVVNIK T+ADKDQLL
Sbjct: 175 VSMVVEVLTDKINRSVAAIRSVVKDYGGKMADSGSVMFKFKRVRVVNIKVTEADKDQLLI 234
Query: 227 IALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSEL 286
IALDAGAEDVIEPP EDDTDEDR ERYYK+V++++NY+ I +KLR+ G+ FE DNGSEL
Sbjct: 235 IALDAGAEDVIEPPTYEDDTDEDREERYYKIVTSNENYSTILSKLRDEGVNFEPDNGSEL 294
Query: 287 LPITTIE 293
LP+TT+E
Sbjct: 295 LPLTTVE 301
>sp|Q9Z7Y0|Y573_CHLPN Probable transcriptional regulatory protein
CPn_0573/CP_0176/CPj0573/CpB0595 OS=Chlamydia pneumoniae
GN=CPn_0573 PE=3 SV=1
Length = 238
Score = 130 bits (328), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 99/151 (65%)
Query: 86 RKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKR 145
RK D KK K++SR+ KE+ISAVK GG +P SN L V++KAKE ++P + +ERN+K+
Sbjct: 13 RKERADHKKGKIFSRIIKELISAVKLGGADPKSNARLRMVIQKAKENNIPNENIERNLKK 72
Query: 146 ASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFK 205
A+ Q+ F E YE+YG+GGV I+VE +TD R+ + +R + GG + +PGSV++
Sbjct: 73 ATSAEQKNFEEVTYELYGHGGVGIIVEAMTDNKNRTASDMRIAINKRGGSLVEPGSVLYN 132
Query: 206 FRRARVVNIKFTDADKDQLLDIALDAGAEDV 236
F R + + D++ + A++AGAED+
Sbjct: 133 FARKGACTVAKSSIDEEVIFSYAIEAGAEDL 163
>sp|Q9PJT5|Y742_CHLMU Probable transcriptional regulatory protein TC_0742 OS=Chlamydia
muridarum (strain MoPn / Nigg) GN=TC_0742 PE=3 SV=1
Length = 238
Score = 130 bits (328), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 96/151 (63%)
Query: 86 RKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKR 145
RK D KK K++SR KE+ISAVK GGP+P SN L +++KAK+ ++P + +ERN+K+
Sbjct: 13 RKERADHKKGKIFSRTIKELISAVKMGGPDPKSNARLRMIIQKAKDQNIPNENIERNLKK 72
Query: 146 ASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFK 205
AS Q+ + E YE+YG+GGV I+VE +TD R+ + +R V GG + +PGSV++
Sbjct: 73 ASSADQKNYEEVTYELYGFGGVGIIVEAMTDNKNRTASDMRVAVNKRGGALVEPGSVLYN 132
Query: 206 FRRARVVNIKFTDADKDQLLDIALDAGAEDV 236
F R + + D+ LL +D G ED+
Sbjct: 133 FSRKGACYVPKSSIDEASLLTHVIDCGGEDL 163
>sp|O84463|Y457_CHLTR Probable transcriptional regulatory protein CT_457 OS=Chlamydia
trachomatis (strain D/UW-3/Cx) GN=CT_457 PE=3 SV=1
Length = 238
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 95/151 (62%)
Query: 86 RKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKR 145
RK D KK K++SR KE+ISAVK GGP+P SN L +++KAK+ ++P + +ERN+K+
Sbjct: 13 RKERADHKKGKIFSRTIKELISAVKMGGPDPKSNARLRMIIQKAKDQNIPNENIERNLKK 72
Query: 146 ASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFK 205
AS Q+ + E YE+YG+GGV I+VE +TD R+ + +R V GG + +PGSV++
Sbjct: 73 ASSADQKNYEEVTYELYGFGGVGIIVEAMTDNKNRTASDMRVAVNKRGGALVEPGSVLYN 132
Query: 206 FRRARVVNIKFTDADKDQLLDIALDAGAEDV 236
F R + D+ LL +D G ED+
Sbjct: 133 FSRKGACYVPKHSIDEASLLTHMIDCGGEDL 163
>sp|B0B830|Y717_CHLT2 Probable transcriptional regulatory protein CTL0717 OS=Chlamydia
trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B)
GN=CTL0717 PE=3 SV=1
Length = 238
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 95/151 (62%)
Query: 86 RKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKR 145
RK D KK K++SR KE+ISAVK GGP+P SN L +++KAK+ ++P + +ERN+K+
Sbjct: 13 RKERADHKKGKIFSRTIKELISAVKMGGPDPKSNARLRMIIQKAKDQNIPNENIERNLKK 72
Query: 146 ASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFK 205
AS Q+ + E YE+YG+GGV I+VE +TD R+ + +R V GG + +PGSV++
Sbjct: 73 ASSADQKNYEEVTYELYGFGGVGIIVEAMTDNKNRTASDMRVAVNKRGGALVEPGSVLYN 132
Query: 206 FRRARVVNIKFTDADKDQLLDIALDAGAEDV 236
F R + D+ LL +D G ED+
Sbjct: 133 FSRKGACYVPKHSIDEASLLTHVIDCGGEDL 163
>sp|B0BC95|Y713_CHLTB Probable transcriptional regulatory protein CTLon_0713 OS=Chlamydia
trachomatis serovar L2b (strain UCH-1/proctitis)
GN=CTLon_0713 PE=3 SV=1
Length = 238
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 95/151 (62%)
Query: 86 RKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKR 145
RK D KK K++SR KE+ISAVK GGP+P SN L +++KAK+ ++P + +ERN+K+
Sbjct: 13 RKERADHKKGKIFSRTIKELISAVKMGGPDPKSNARLRMIIQKAKDQNIPNENIERNLKK 72
Query: 146 ASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFK 205
AS Q+ + E YE+YG+GGV I+VE +TD R+ + +R V GG + +PGSV++
Sbjct: 73 ASSADQKNYEEVTYELYGFGGVGIIVEAMTDNKNRTASDMRVAVNKRGGALVEPGSVLYN 132
Query: 206 FRRARVVNIKFTDADKDQLLDIALDAGAEDV 236
F R + D+ LL +D G ED+
Sbjct: 133 FSRKGACYVPKHSIDEASLLTHVIDCGGEDL 163
>sp|Q3KLP1|Y499_CHLTA Probable transcriptional regulatory protein CTA_0499 OS=Chlamydia
trachomatis serovar A (strain HAR-13 / ATCC VR-571B)
GN=CTA_0499 PE=3 SV=1
Length = 238
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 95/151 (62%)
Query: 86 RKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKR 145
RK D KK K++SR KE+ISAVK GGP+P SN L +++KAK+ ++P + +ERN+K+
Sbjct: 13 RKERADHKKGKIFSRTIKELISAVKMGGPDPKSNARLRMIIQKAKDQNIPNENIERNLKK 72
Query: 146 ASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFK 205
AS Q+ + E YE+YG+GGV I+VE +TD R+ + +R V GG + +PGSV++
Sbjct: 73 ASSADQKNYEEVTYELYGFGGVGIIVEAMTDNKNRTASDMRVAVNKRGGALVEPGSVLYN 132
Query: 206 FRRARVVNIKFTDADKDQLLDIALDAGAEDV 236
F R + D+ LL +D G ED+
Sbjct: 133 FSRKGACYVPKHSIDEASLLTHVIDCGGEDL 163
>sp|B2V2S0|Y943_CLOBA Probable transcriptional regulatory protein CLH_0943 OS=Clostridium
botulinum (strain Alaska E43 / Type E3) GN=CLH_0943 PE=3
SV=1
Length = 246
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 12/197 (6%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I +KG DAK+ K+++++GKE++ AVK GGP+P +N L ++ KAK ++P D + R+
Sbjct: 10 IQAKKGKTDAKRGKIFTKIGKELMVAVKNGGPSPETNNRLRDIIAKAKAANMPNDTITRS 69
Query: 143 IKRAS-EKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGS 201
IK+AS E G + +YE YG GV+++VE LTD RS VR GG M G
Sbjct: 70 IKKASGELGSVNYENIIYEGYGPSGVAVIVETLTDNKNRSAGNVRSAFTKGGGNMGTQGC 129
Query: 202 VMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTS 261
V F F+ + I+ D D+D+++ +ALDAGAED + DED + V +T
Sbjct: 130 VGFMFQEKGEMVIEKADKDEDEMMMLALDAGAEDF--------NADEDEV---FVVTTTP 178
Query: 262 DNYTDITTKLREAGIPF 278
+++ + L GI F
Sbjct: 179 EDFGTVREALEAEGIEF 195
>sp|B2TML4|Y1008_CLOBB Probable transcriptional regulatory protein CLL_A1008
OS=Clostridium botulinum (strain Eklund 17B / Type B)
GN=CLL_A1008 PE=3 SV=1
Length = 246
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 12/197 (6%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I +KG DAK+ K+++++GKE++ AVK GGP+P +N L ++ KAK ++P D + R+
Sbjct: 10 IQAKKGKTDAKRGKIFTKIGKELMVAVKNGGPSPETNNRLRDIIAKAKAANMPNDTITRS 69
Query: 143 IKRAS-EKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGS 201
IK+AS E G + +YE YG GV+++VE LTD RS VR GG M G
Sbjct: 70 IKKASGELGSVNYENIIYEGYGPSGVAVIVETLTDNKNRSAGNVRSAFTKGGGNMGTQGC 129
Query: 202 VMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTS 261
V F F+ + I+ D D+D+++ +ALDAGAED + DED + V +T
Sbjct: 130 VGFMFQEKGEMVIEKADKDEDEMMMLALDAGAEDF--------NADEDEV---FVVTTTP 178
Query: 262 DNYTDITTKLREAGIPF 278
+++ + L GI F
Sbjct: 179 EDFGTVREALEAEGIEF 195
>sp|Q253C8|Y838_CHLFF Probable transcriptional regulatory protein CF0838 OS=Chlamydophila
felis (strain Fe/C-56) GN=CF0838 PE=3 SV=1
Length = 238
Score = 128 bits (321), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 96/151 (63%)
Query: 86 RKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKR 145
RK D K+ K++SR KE+ISAVK GGP+P +N L +++KAK+ ++P + +ERN+K+
Sbjct: 13 RKERADHKRGKIFSRTIKELISAVKMGGPDPKTNARLRVIIQKAKDQNIPSENIERNLKK 72
Query: 146 ASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFK 205
AS Q+ F + YE+YGYGGV I+VE +TD R+ + +R V GG + +PGSV++
Sbjct: 73 ASSADQKNFEDVTYELYGYGGVGIIVEAMTDNKNRTASDMRIAVNKRGGSLVEPGSVLYN 132
Query: 206 FRRARVVNIKFTDADKDQLLDIALDAGAEDV 236
F R + D+ LL ++ GAED+
Sbjct: 133 FSRKGACYVPKNSIDEAALLSHVIEVGAEDL 163
>sp|B3WD20|Y1186_LACCB Probable transcriptional regulatory protein LCABL_11860
OS=Lactobacillus casei (strain BL23) GN=LCABL_11860 PE=3
SV=1
Length = 243
Score = 128 bits (321), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 102/156 (65%), Gaps = 2/156 (1%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I GRK AQD+K+ K++ ++ +E+ A K+GGP+P+ N L V++KAK ++PKD ++R
Sbjct: 10 IQGRKNAQDSKRGKIFQKLSRELYMAAKQGGPDPSGNPSLRLVMDKAKAANMPKDNIKRA 69
Query: 143 IKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSV 202
+ +AS++ + E YE YG GGV+I+VE LTD R+ + VR + GG MA G+V
Sbjct: 70 LDKASDRDAANYDEVTYEGYGPGGVAILVEALTDNRNRTSSTVRVAITRHGGNMAAAGAV 129
Query: 203 MFKFRRA--RVVNIKFTDADKDQLLDIALDAGAEDV 236
+ F R V++ D D+DQ+L+ AL+AGAED+
Sbjct: 130 SYMFDRKGYLVISRDDLDVDEDQMLEDALEAGAEDM 165
>sp|Q03AF5|Y1022_LACC3 Probable transcriptional regulatory protein LSEI_1022
OS=Lactobacillus casei (strain ATCC 334) GN=LSEI_1022
PE=3 SV=1
Length = 243
Score = 127 bits (320), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 102/156 (65%), Gaps = 2/156 (1%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I GRK AQD+K+ K++ ++ +E+ A K+GGP+P+ N L V++KAK ++PKD ++R
Sbjct: 10 IQGRKNAQDSKRGKIFQKLSRELYMAAKQGGPDPSGNPSLRLVMDKAKAANMPKDNIKRA 69
Query: 143 IKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSV 202
+ +AS++ + E YE YG GGV+I+VE LTD R+ + VR + GG MA G+V
Sbjct: 70 LDKASDRDAANYDEVTYEGYGPGGVAILVEALTDNRNRTSSTVRVAITRHGGNMAAAGAV 129
Query: 203 MFKFRRA--RVVNIKFTDADKDQLLDIALDAGAEDV 236
+ F R V++ D D+DQ+L+ AL+AGAED+
Sbjct: 130 SYMFDRKGYLVISRDDLDVDEDQMLEDALEAGAEDM 165
>sp|Q824H7|Y169_CHLCV Probable transcriptional regulatory protein CCA_00169
OS=Chlamydophila caviae (strain GPIC) GN=CCA_00169 PE=3
SV=1
Length = 238
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 97/151 (64%)
Query: 86 RKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKR 145
RK D K+ K++SR KE+++AVK GGP+P +N L V++KAK+ ++P + +ERN+K+
Sbjct: 13 RKERADHKRGKIFSRTIKELMAAVKMGGPDPKTNARLRVVIQKAKDQNIPNENIERNLKK 72
Query: 146 ASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFK 205
A+ Q+ F + YE+YG+GGV I+VE +TD R+ + +R V GG + +PGSV++
Sbjct: 73 ATSADQKNFEDVTYELYGFGGVGIIVEAMTDNKNRTASDMRIAVNKRGGSLVEPGSVLYN 132
Query: 206 FRRARVVNIKFTDADKDQLLDIALDAGAEDV 236
F R I + D+ LL +D GAED+
Sbjct: 133 FARKGACYISKSSIDEATLLSHVIDVGAEDL 163
>sp|C5CGU7|Y1935_KOSOT Probable transcriptional regulatory protein Kole_1935 OS=Kosmotoga
olearia (strain TBF 19.5.1) GN=Kole_1935 PE=3 SV=1
Length = 252
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 122/199 (61%), Gaps = 18/199 (9%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RK AQDAKK+K+++++ +E++ A ++GG +P +N L A +E+AK ++PKD +E
Sbjct: 8 ANIKHRKMAQDAKKSKIFTKIIRELMVAAREGGTDPNTNNALRAAIERAKAANMPKDTME 67
Query: 141 RNIKR-ASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
+ IK+ A E ++F+E +YEVY GGV++++ LTD R+ +R ++ GG MA+
Sbjct: 68 KAIKKGAGELEGQSFVEALYEVYAPGGVAMLIRALTDNKNRTAQEIRHLLSKHGGNMAES 127
Query: 200 GSVMFKFRRARVVNI---KFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYK 256
GSV + F R V+ + + +D D+ QLL A+DAGAED+ +D+ D R
Sbjct: 128 GSVAWMFERKGVITVPRSEISDMDEFQLL--AIDAGAEDI------QDEEDPVR------ 173
Query: 257 VVSTSDNYTDITTKLREAG 275
+++ + +++ L E G
Sbjct: 174 IITAPEEASNVKNALEENG 192
>sp|Q88V33|Y2253_LACPL Probable transcriptional regulatory protein lp_2253
OS=Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB
8826 / WCFS1) GN=lp_2253 PE=3 SV=1
Length = 242
Score = 124 bits (312), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 97/157 (61%), Gaps = 4/157 (2%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I GRK AQDAK+ K++ ++ +E+ AVK GGP+P SN L V++KAK ++PKD ++R
Sbjct: 10 IQGRKNAQDAKRGKVFQKISRELYMAVKAGGPDPDSNAQLRLVMDKAKAANMPKDNIKRA 69
Query: 143 IKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSV 202
+ + S G E + E YE YG GG++++V LTD R+ AAVR GG +A G+V
Sbjct: 70 VDKGSGSGAENYEEVTYEGYGPGGIAVLVHALTDNKNRTAAAVRSAFTHHGGALAATGAV 129
Query: 203 MFKFRRARVVNIKFTDADKDQ---LLDIALDAGAEDV 236
+ F R + I D D D+ L+D+ LDAG +D+
Sbjct: 130 SYMFDRKGYIVISREDLDTDEDTMLMDV-LDAGGDDL 165
>sp|Q1QHP3|Y3525_NITHX Probable transcriptional regulatory protein Nham_3525
OS=Nitrobacter hamburgensis (strain X14 / DSM 10229)
GN=Nham_3525 PE=3 SV=1
Length = 248
Score = 124 bits (311), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 96/155 (61%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I RKG QDA+K+KL+S++ +E+ A K G P+P N L A + A+ ++PKD +ER
Sbjct: 10 IMHRKGRQDAQKSKLFSKLAREITVAAKLGTPDPAMNARLRAAMIAARAENMPKDNIERA 69
Query: 143 IKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSV 202
IK+AS E++ E YE YG GGV+I++EVLTD R+ + +R GG + + GSV
Sbjct: 70 IKKASGHDAESYDELRYEGYGPGGVAIIMEVLTDNRNRAASDIRSYFTKSGGNLGETGSV 129
Query: 203 MFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVI 237
F F R VV A D +L+ A++AGA+DV+
Sbjct: 130 SFMFDRLGVVEYDADKASADDMLEAAVEAGADDVV 164
>sp|P62036|Y1074_GEOSL Probable transcriptional regulatory protein GSU1074 OS=Geobacter
sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
GN=GSU1074 PE=3 SV=1
Length = 247
Score = 124 bits (311), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 127/222 (57%), Gaps = 15/222 (6%)
Query: 79 RSSKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDI 138
+ S I +KGA DAK+ K+++++ KE+ A K GG +P N L A ++KAK ++PKD
Sbjct: 6 KWSTIRHKKGAADAKRGKVFTKLIKEITVAAKIGGGDPNGNPRLRAAVDKAKAENMPKDN 65
Query: 139 VERNIKRAS-EKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMA 197
+ER IK+ + E ++ E +YE YG GGV+++VE +TD R+V VR C G M
Sbjct: 66 IERAIKKGTGELEGVSYEEIIYEGYGPGGVAVLVECMTDNRNRTVGEVRSTFTKCNGNMG 125
Query: 198 DPGSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKV 257
+ G V + F + ++ + D D ++L + AL+AGA+DV DE E Y+V
Sbjct: 126 EAGCVSWMFDKKGLIVLS-KDVDFEKLFETALEAGADDV---------ADE---EEQYEV 172
Query: 258 VSTSDNYTDITTKLREAGIPFETDNGSELLPITTIEDIHQNA 299
++ + D+ L +AG PFE+ + ++P T ++ +NA
Sbjct: 173 LTDPAAFIDVREALEKAGFPFESAEIT-MIPQTMVKLDGKNA 213
>sp|C4Z5P5|Y902_EUBE2 Probable transcriptional regulatory protein EUBELI_00902
OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48)
GN=EUBELI_00902 PE=3 SV=1
Length = 247
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 120/215 (55%), Gaps = 15/215 (6%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ IA +K A DA K K+++R+GKE++ AVK+GGP+ +N+ L V+ K K ++P D ++
Sbjct: 8 ANIAHKKAANDAAKGKIFTRLGKELMIAVKEGGPDVNNNSKLRQVVAKCKAANMPNDTID 67
Query: 141 RNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPG 200
R IK+A+ + YE YG G +I+VE LTD R+ + +R GG + PG
Sbjct: 68 RAIKKAASNDMSNYESVTYEGYGPNGTAIIVEALTDNRNRAASNIRSAFTKGGGNVGTPG 127
Query: 201 SVMFKF--RRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVV 258
V F F + +V+ + D D+L+ +ALDAGA+D E E Y+++
Sbjct: 128 CVSFMFDNKGQMIVDKEEYTGDADELMMLALDAGADDFNEE------------EDCYEIL 175
Query: 259 STSDNYTDITTKLREAGIPFETDNGSELLPITTIE 293
++ + + + L +AG+ F + + ++P TT++
Sbjct: 176 TSPEEFDAVNQALADAGVTFASAEVT-MIPQTTVD 209
>sp|Q03EU1|Y1240_PEDPA Probable transcriptional regulatory protein PEPE_1240
OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w)
GN=PEPE_1240 PE=3 SV=1
Length = 245
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 95/156 (60%), Gaps = 2/156 (1%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I GRK AQDAK+ K++ R+ +E+ AVK GGP+P+SN L +++KA+ ++PKD ++R
Sbjct: 10 IQGRKNAQDAKRGKIFQRISREIYVAVKAGGPDPSSNPQLRLMMDKARAANMPKDNIKRA 69
Query: 143 IKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSV 202
+ + S G + E YE YG G +I+V LTD R+ AAVR GG + GSV
Sbjct: 70 VDKGSGAGGANYEEITYEGYGPAGTAIIVSALTDNKNRTAAAVRSAFTHHGGSLGASGSV 129
Query: 203 MFKFRRARVVNIKFTDADK--DQLLDIALDAGAEDV 236
+ F R + I D DK D +++ A+DAGA+DV
Sbjct: 130 SYMFDRKGYIVISREDLDKNEDDMMEDAIDAGADDV 165
>sp|Q5L6U7|Y166_CHLAB Probable transcriptional regulatory protein CAB166 OS=Chlamydophila
abortus (strain S26/3) GN=CAB166 PE=3 SV=1
Length = 238
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 101/163 (61%), Gaps = 6/163 (3%)
Query: 86 RKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKR 145
RK D K+ K++SR KE+++AVK GGP+P +N L +++KAK+ ++P + +ERN+K+
Sbjct: 13 RKERADHKRGKIFSRTIKELMAAVKMGGPDPKTNARLRMIIQKAKDQNIPNENIERNLKK 72
Query: 146 ASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFK 205
A+ Q+ F YE+YG+GGV I+VE +TD R+ + +R V GG + +PGSV++
Sbjct: 73 ATSADQKNFENVTYELYGHGGVGIIVEAMTDNKNRTASDMRIAVNKRGGSLVEPGSVLYN 132
Query: 206 FRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDE 248
F R + + D+ LL +D GAED+ ++D DE
Sbjct: 133 FVRKGACYVPKSSIDEAVLLPHVIDVGAEDL------DNDDDE 169
>sp|A7HM20|Y1106_FERNB Probable transcriptional regulatory protein Fnod_1106
OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM
5306 / Rt17-B1) GN=Fnod_1106 PE=3 SV=1
Length = 252
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 104/160 (65%), Gaps = 2/160 (1%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RK AQDAK++K+++++ +E+I A ++GG NP +N L AVLEKA+E ++PKD VE
Sbjct: 8 ANIKHRKAAQDAKRSKIFTKLIREIIVAAREGGGNPDTNPRLRAVLEKAREANMPKDTVE 67
Query: 141 RNIKRAS-EKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
R+IK+ + E E + E +YE Y GGV++ + LTD R+ +R ++ GG +A+
Sbjct: 68 RSIKKGTGELEGEKYEEIIYEAYAPGGVALYILALTDNKNRTAQELRHILSKNGGSLAES 127
Query: 200 GSVMFKFRRARVVNIKFTD-ADKDQLLDIALDAGAEDVIE 238
GSV + F R + I + +D D+ +A+DAGAED+ E
Sbjct: 128 GSVAWIFERKGAIEISASKISDMDEFTLLAIDAGAEDIEE 167
>sp|C0R1L5|Y1533_BRAHW Probable transcriptional regulatory protein BHWA1_01533
OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1)
GN=BHWA1_01533 PE=3 SV=1
Length = 247
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 116/202 (57%), Gaps = 14/202 (6%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGG-PNPTSNTVLAAVLEKAKELDVPKDIV 139
+ I +K A D+KK K++S++ KE+ AVK+GG P+P N L V+ KAK ++P D +
Sbjct: 8 ASIKHKKAANDSKKGKIWSKIAKEITIAVKEGGSPDPDQNARLRMVIVKAKGTNMPNDNI 67
Query: 140 ERNIKRASEKGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMAD 198
+R IKR + G+ A IE++ YE Y GGV+I+V+V TD R+ A +R + GG +A+
Sbjct: 68 DRAIKRGAGAGEGANIEEMSYEGYAPGGVAIIVDVATDNKNRTAAEIRSIFSKNGGNLAE 127
Query: 199 PGSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVV 258
G+V ++F++ VV I ++ L+DI LDAGAED+ ++ E + +
Sbjct: 128 NGAVSWQFKKKAVVMIPAAGNTEESLMDIVLDAGAEDI------------EQDEEVFTIT 175
Query: 259 STSDNYTDITTKLREAGIPFET 280
+ + I L+ GI E+
Sbjct: 176 GPMETLSSIVDALKAKGIEPES 197
>sp|P62037|Y904_LACJO Probable transcriptional regulatory protein LJ_0904
OS=Lactobacillus johnsonii (strain CNCM I-12250 / La1 /
NCC 533) GN=LJ_0904 PE=3 SV=1
Length = 243
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 95/156 (60%), Gaps = 2/156 (1%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I GRK AQDAK+ K++ ++ +E+ A K GGP+P+ N L V++KA+ ++PK +ER
Sbjct: 10 IQGRKNAQDAKRGKVFQKLSREIYMAAKSGGPDPSGNPTLRMVMDKARAANMPKTNIERA 69
Query: 143 IKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSV 202
IK+A E + E YE Y GGV+++VE LTD R+ + VR GG + GSV
Sbjct: 70 IKKAEGNSDEHYDEITYEGYAPGGVAVLVEALTDNKNRTASDVRVAFTRNGGSLGATGSV 129
Query: 203 MFKFRRA--RVVNIKFTDADKDQLLDIALDAGAEDV 236
+ F R V++ TDAD+DQ+L +DAG +D+
Sbjct: 130 AYMFDRKGYLVIDRSTTDADEDQVLLDVMDAGGDDL 165
>sp|Q042I3|Y1276_LACGA Probable transcriptional regulatory protein LGAS_1276
OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243)
GN=LGAS_1276 PE=3 SV=1
Length = 243
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 95/156 (60%), Gaps = 2/156 (1%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I GRK AQDAK+ K++ ++ +E+ A K GGP+P+ N L V++KA+ ++PK +ER
Sbjct: 10 IQGRKNAQDAKRGKVFQKLSREIYMAAKSGGPDPSGNPTLRMVMDKARAANMPKTNIERA 69
Query: 143 IKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSV 202
IK+A E + E YE Y GGV+++VE LTD R+ + VR GG + GSV
Sbjct: 70 IKKAEGNSDEHYDEITYEGYAPGGVAVLVEALTDNKNRTASDVRVAFTRNGGSLGATGSV 129
Query: 203 MFKFRRAR--VVNIKFTDADKDQLLDIALDAGAEDV 236
+ F R V++ TDAD+DQ+L +DAG +D+
Sbjct: 130 AYMFDRKGYIVIDRSTTDADEDQVLLDVMDAGGDDL 165
>sp|Q838A9|Y663_ENTFA Probable transcriptional regulatory protein EF_0663 OS=Enterococcus
faecalis (strain ATCC 700802 / V583) GN=EF_0663 PE=3
SV=1
Length = 242
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 109/198 (55%), Gaps = 15/198 (7%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
S I GRK AQDAK+ K++ ++ +E+ A K GGP+P N L ++KAK ++P D +
Sbjct: 8 SNIQGRKNAQDAKRGKIFQKVSREIYMAAKAGGPDPAMNPALRLAVDKAKSANMPNDNIA 67
Query: 141 RNIKRASEKGQ-EAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
R IK+AS G+ E + E YE YG GGV+++V LTD R+ VR GG + +
Sbjct: 68 RAIKKASSAGEGEHYDEVTYEGYGPGGVAVLVHALTDNRNRTATNVRVAFTRNGGSLGET 127
Query: 200 GSVMFKFRRARVVNIKFTDA--DKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKV 257
GSV + F R + IK D ++D +L++ L+AG ED+ P +++
Sbjct: 128 GSVNYMFDRKGYIVIKREDHAIEEDDMLEVVLEAGGEDIETSP------------EVFEI 175
Query: 258 VSTSDNYTDITTKLREAG 275
+ +++T + L +AG
Sbjct: 176 YTAPEDFTAVRDALEQAG 193
>sp|Q28LW5|Y3380_JANSC Probable transcriptional regulatory protein Jann_3380 OS=Jannaschia
sp. (strain CCS1) GN=Jann_3380 PE=3 SV=1
Length = 255
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 97/169 (57%), Gaps = 3/169 (1%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RKG QD +AK++S+M KE+ A K G P+P N L +++AK + VPKD++E
Sbjct: 8 ANIQHRKGRQDKLRAKVFSKMSKEITVAAKMGDPDPDKNPRLRLAVKEAKSVSVPKDVIE 67
Query: 141 RNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPG 200
R I +A+ E + E YE YG GV+++VE +TD R+ + VR GG + + G
Sbjct: 68 RAIAKATGGDSENYDEIRYEGYGPNGVAVIVETMTDNKNRTASTVRSTFTKNGGNLGETG 127
Query: 201 SVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDED 249
SV F F R V + D D ++ A++AGAEDV NE D DED
Sbjct: 128 SVGFMFDRKGQVTYPLSAGDADTIMMAAIEAGAEDV---ETNEGDGDED 173
>sp|Q3SP09|Y2729_NITWN Probable transcriptional regulatory protein Nwi_2729 OS=Nitrobacter
winogradskyi (strain Nb-255 / ATCC 25391) GN=Nwi_2729
PE=3 SV=1
Length = 248
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 108/189 (57%), Gaps = 12/189 (6%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I RKG QDA+K+KL+S++ +E+ A K G P+P N L A + A+ ++PKD +ER
Sbjct: 10 IMHRKGRQDAQKSKLFSKLAREITVAAKLGTPDPAMNPRLRAAVIAARAENMPKDNIERA 69
Query: 143 IKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSV 202
IK+AS E++ E YE YG GGV++++EVLTD R+ + +R GG + + GSV
Sbjct: 70 IKKASGNDAESYDELRYEGYGPGGVAVIMEVLTDNRNRAASDIRSYFTKSGGNLGETGSV 129
Query: 203 MFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSD 262
F F R V+ A D +L+ A++AGA+DV+ +DE E Y ++ D
Sbjct: 130 SFMFDRLGVIEYDADKASVDDMLEAAIEAGADDVV--------SDEGGHEIY----ASQD 177
Query: 263 NYTDITTKL 271
+ D+ L
Sbjct: 178 TFRDVAKAL 186
>sp|B3E787|Y1245_GEOLS Probable transcriptional regulatory protein Glov_1245 OS=Geobacter
lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ)
GN=Glov_1245 PE=3 SV=1
Length = 247
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 117/202 (57%), Gaps = 16/202 (7%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
S I +KGA DAK+ K+++++ KE+ A K GG +P +N L ++KAK ++PKD +E
Sbjct: 8 STIKHKKGAADAKRGKIFTKIIKEISVAAKLGGGDPAANPRLRTAIDKAKGENMPKDNIE 67
Query: 141 RNIKRASEKGQEAFI--EKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMAD 198
R IK+ + G E + E VYE YG GGV+++VEV+TD R+V+ VR + C G M +
Sbjct: 68 RAIKKGT-GGMEGVVYEEIVYEGYGPGGVAVLVEVMTDNRNRTVSEVRSIFTKCNGNMGE 126
Query: 199 PGSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVV 258
G V + F + V++ T D DQL + AL+AGAEDV+E ED+ E V
Sbjct: 127 AGCVAWMFDKKGVISYD-TSLDFDQLFEAALEAGAEDVVE----EDEQIE--------VY 173
Query: 259 STSDNYTDITTKLREAGIPFET 280
+ ++ ++ L G F++
Sbjct: 174 TEPSSFIEVRDALEAKGFKFQS 195
>sp|A8YUH0|Y777_LACH4 Probable transcriptional regulatory protein lhv_0777
OS=Lactobacillus helveticus (strain DPC 4571)
GN=lhv_0777 PE=3 SV=1
Length = 242
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 95/156 (60%), Gaps = 2/156 (1%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I GRK AQDAK+ K++ ++ +E+ A K GGP+P N L V++KA+ ++PKD ++R
Sbjct: 10 IQGRKNAQDAKRGKIFQKLSREIYMAAKSGGPDPDGNPTLRMVIDKARSNNMPKDNIKRA 69
Query: 143 IKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSV 202
IK+A +E + E YE Y GGV++ VE LTD R+ + VR GG + GSV
Sbjct: 70 IKKAEGGSEEHYDEITYEGYAPGGVAVFVEALTDNKNRTASDVRVAFTRNGGSLGATGSV 129
Query: 203 MFKFRRAR--VVNIKFTDADKDQLLDIALDAGAEDV 236
+ F R V++ TDAD+DQ+L +DAG +D+
Sbjct: 130 AYMFDRKGYIVIDRSTTDADEDQVLLDVMDAGGDDL 165
>sp|Q5FL22|Y733_LACAC Probable transcriptional regulatory protein LBA0733
OS=Lactobacillus acidophilus (strain ATCC 700396 / NCK56
/ N2 / NCFM) GN=LBA0733 PE=3 SV=1
Length = 242
Score = 120 bits (302), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 94/156 (60%), Gaps = 2/156 (1%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I GRK AQDAK+ K++ ++ +E+ A K GGP+P N L V++KA+ ++PKD ++R
Sbjct: 10 IQGRKNAQDAKRGKVFQKLSREIYMAAKSGGPDPDGNPALRMVIDKARSNNMPKDNIQRA 69
Query: 143 IKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSV 202
IK+A E + E YE Y GGV++ VE LTD R+ + VR GG + GSV
Sbjct: 70 IKKAEGGSDEHYDEITYEGYAPGGVAVFVEALTDNKNRTASDVRVAFTRNGGSLGATGSV 129
Query: 203 MFKFRRAR--VVNIKFTDADKDQLLDIALDAGAEDV 236
+ F R V++ TDAD+DQ+L +DAG +D+
Sbjct: 130 AYMFDRKGYIVIDRSTTDADEDQVLLDVMDAGGDDL 165
>sp|Q8RIE0|Y1661_FUSNN Probable transcriptional regulatory protein FN1661 OS=Fusobacterium
nucleatum subsp. nucleatum (strain ATCC 25586 / CIP
101130 / JCM 8532 / LMG 13131) GN=FN1661 PE=3 SV=1
Length = 249
Score = 120 bits (302), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 117/214 (54%), Gaps = 14/214 (6%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RKGAQD K+AKL+++ G+E+ A K+GG +P N L +EKAK ++PKDI+E
Sbjct: 8 NNIQHRKGAQDKKRAKLFTKFGRELTIAAKEGGGDPNFNPRLRLAIEKAKAGNMPKDILE 67
Query: 141 RNIKRASEKGQEA-FIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
R IK+ S + + F E YE YG G + +VE +TD R+ + +R G +
Sbjct: 68 RAIKKGSGELEGVDFTEMRYEGYGPAGTAFIVEAVTDNKNRTASEMRMTFTRKDGNLGAD 127
Query: 200 GSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVS 259
G+V + F++ V+ +K D D+ + AL+AGAEDV EDD Y++V +
Sbjct: 128 GAVSWMFKKKGVITVKAEGIDADEFMMAALEAGAEDVT-----EDDG-------YFEVTT 175
Query: 260 TSDNYTDITTKLREAGIPFETDNGSELLPITTIE 293
+ + L+ AG +E S ++P T+E
Sbjct: 176 EYTEFQTVLENLKNAGYQYEEAEIS-MIPENTVE 208
>sp|Q1GAZ3|Y677_LACDA Probable transcriptional regulatory protein Ldb0677
OS=Lactobacillus delbrueckii subsp. bulgaricus (strain
ATCC 11842 / DSM 20081) GN=Ldb0677 PE=3 SV=1
Length = 243
Score = 120 bits (302), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 110/195 (56%), Gaps = 14/195 (7%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I GRK AQDAK+ K++ ++ +E+ A K GGP+P N L ++KA+ ++PKD ++R
Sbjct: 10 IQGRKNAQDAKRGKVFQKLSREIYMAAKSGGPDPLGNPRLRLAVDKARAANMPKDNIQRA 69
Query: 143 IKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSV 202
IK+A E + E YE Y GGV+I+VE LTD R+ ++VR GG + GSV
Sbjct: 70 IKKAEGNSDEHYDEVTYEGYAPGGVAILVEALTDNKNRTASSVRVAFTRNGGSLGATGSV 129
Query: 203 MFKFRRAR--VVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVST 260
+ F R V++ TDAD+DQ+L ++AG +D+ DD Y++ +
Sbjct: 130 AYMFDRKGYIVIDRSTTDADEDQMLMDVMEAGGDDL----QTSDDA--------YEIYTD 177
Query: 261 SDNYTDITTKLREAG 275
+ ++T + L +AG
Sbjct: 178 AKSFTAVRDALEKAG 192
>sp|Q04BD3|Y609_LACDB Probable transcriptional regulatory protein LBUL_0609
OS=Lactobacillus delbrueckii subsp. bulgaricus (strain
ATCC BAA-365) GN=LBUL_0609 PE=3 SV=1
Length = 243
Score = 120 bits (302), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 110/195 (56%), Gaps = 14/195 (7%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I GRK AQDAK+ K++ ++ +E+ A K GGP+P N L ++KA+ ++PKD ++R
Sbjct: 10 IQGRKNAQDAKRGKVFQKLSREIYMAAKSGGPDPLGNPRLRLAVDKARAANMPKDNIQRA 69
Query: 143 IKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSV 202
IK+A E + E YE Y GGV+I+VE LTD R+ ++VR GG + GSV
Sbjct: 70 IKKAEGNSDEHYDEVTYEGYAPGGVAILVEALTDNKNRTASSVRVAFTRNGGSLGATGSV 129
Query: 203 MFKFRRAR--VVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVST 260
+ F R V++ TDAD+DQ+L ++AG +D+ DD Y++ +
Sbjct: 130 AYMFDRKGYIVIDRSTTDADEDQMLMDVMEAGGDDL----QTSDDA--------YEIYTD 177
Query: 261 SDNYTDITTKLREAG 275
+ ++T + L +AG
Sbjct: 178 AKSFTAVRDALEKAG 192
>sp|B7IHX7|Y1246_THEAB Probable transcriptional regulatory protein THA_1246 OS=Thermosipho
africanus (strain TCF52B) GN=THA_1246 PE=3 SV=1
Length = 252
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 126/216 (58%), Gaps = 17/216 (7%)
Query: 79 RSSKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDI 138
+ + I RK AQDAKK+K+++++ +E+I A K+GG +P +N L AVLE+A+ ++PKD
Sbjct: 6 KWANIKHRKAAQDAKKSKIFTKLIREIIVAAKEGGGDPETNPRLRAVLERARAANMPKDT 65
Query: 139 VERNIKRASEKGQEA-FIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMA 197
+E++IK+ + + + + E +YE Y GV++ + +TD R+ +R ++ GG +A
Sbjct: 66 IEKSIKKGTGELEGVDYQEIIYEAYAPAGVALYIYAMTDNKNRTAQELRHLLSKHGGSLA 125
Query: 198 DPGSVMFKFRRARVVNI-KFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYK 256
+ GSV + F R ++ I K AD ++ +A+DAGAED+I EDD +
Sbjct: 126 ESGSVAWLFERKGIIEIPKEKIADFEEFAMVAIDAGAEDII-----EDDP--------IQ 172
Query: 257 VVSTSDNYTDITTKLREAGIPFETDNGSELLPITTI 292
V++ D T++ KL E G FE + +P T+
Sbjct: 173 VITAPDMLTEVKDKLAENG--FEGEAKVTFIPKNTV 206
>sp|Q5FQC7|Y1679_GLUOX Probable transcriptional regulatory protein GOX1679
OS=Gluconobacter oxydans (strain 621H) GN=GOX1679 PE=3
SV=1
Length = 249
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I RKGAQDAK+AK ++++ +E+ A + G P+PTSN L A + A+E+++PKD VER
Sbjct: 10 IMHRKGAQDAKRAKQFAKVLREITVATRSGLPDPTSNPRLRAAISMAREVNMPKDNVERA 69
Query: 143 IKRAS-EKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGS 201
IK+AS G + ++E YE YG GV+I+VE LTD R+ VR GG + + S
Sbjct: 70 IKKASGAAGGDDYVEVRYEGYGPAGVAIIVEGLTDNRNRTAGEVRAAFSKHGGSLGETNS 129
Query: 202 VMFKFRRARVVNIKFTDADKDQLLDIALDAGAED 235
V F F+R V++ A +D++L+ A++AGA++
Sbjct: 130 VSFMFQRLGVISYPLDVASEDEMLEAAIEAGADN 163
>sp|Q20X07|Y4807_RHOPB Probable transcriptional regulatory protein RPC_4807
OS=Rhodopseudomonas palustris (strain BisB18)
GN=RPC_4807 PE=3 SV=1
Length = 248
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 122/231 (52%), Gaps = 27/231 (11%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I RKG QDA+K+KL+S++ +E+ A K G P+P N L + + A++ ++PKD +ER
Sbjct: 10 IMHRKGRQDAQKSKLFSKLAREITVAAKLGTPDPAMNARLRSAIIAARQENMPKDNIERA 69
Query: 143 IKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSV 202
IK+A E + E YE YG GGV+++VE LTD R+ + +R GG + + GSV
Sbjct: 70 IKKAIGSDGENYDEIRYEGYGPGGVAVIVEALTDNRNRAASDIRSYFTKSGGNLGETGSV 129
Query: 203 MFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSD 262
F F R ++ A D +LD A++AGA+DV+ ++ ++V ++ D
Sbjct: 130 AFMFDRTGIIEFDAKVASADDMLDAAIEAGADDVLS------------SDSGHEVYASQD 177
Query: 263 NYTDITTKL-------REAG--------IPFETDNGSELLPITTIEDIHQN 298
++ ++ L R+A +P + + G +LL + + H +
Sbjct: 178 SFREVAKALEQKFGEARKAALTWKPQNTVPVDDETGEKLLKLIDLLQEHDD 228
>sp|Q92M88|Y2753_RHIME Probable transcriptional regulatory protein R02753 OS=Rhizobium
meliloti (strain 1021) GN=R02753 PE=3 SV=1
Length = 248
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 94/154 (61%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I RKG QDA ++K++S++ +E+ A K G P+PT N L ++ AK +PKD +ER
Sbjct: 10 IMHRKGRQDAVRSKMFSKLAREITVAAKTGLPDPTMNPRLRLAIQNAKAQSMPKDNIERA 69
Query: 143 IKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSV 202
+K+A+ E + E YE YG GGV+++VE LTD R+ + VR GG + + GSV
Sbjct: 70 VKKAAGGDAENYEEVRYEGYGPGGVAVIVEALTDNRNRTASNVRSTFTKAGGALGETGSV 129
Query: 203 MFKFRRARVVNIKFTDADKDQLLDIALDAGAEDV 236
F F R + K + D D++++ A++AGA+DV
Sbjct: 130 SFSFDRVGEITYKLSAGDADKVMEAAIEAGADDV 163
>sp|Q39XN9|Y743_GEOMG Probable transcriptional regulatory protein Gmet_0743 OS=Geobacter
metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
GN=Gmet_0743 PE=3 SV=1
Length = 247
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 127/220 (57%), Gaps = 15/220 (6%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
S I +KGA DAK+ K+++++ KE+ A K GG +P N L + ++KAK ++PKD +E
Sbjct: 8 STIKHKKGAADAKRGKVFTKIIKEITVAAKLGGGDPNGNPRLRSAVDKAKAENMPKDNIE 67
Query: 141 RNIKRASEKGQEA-FIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
R IK+ + + + + E VYE YG GGV+++VE +TD R+V VR C G M +
Sbjct: 68 RAIKKGTGELEGVNYEEIVYEGYGPGGVAVLVECMTDNRNRTVGDVRSTFTKCNGNMGET 127
Query: 200 GSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVS 259
G V + F + ++ + DAD ++L ++AL+AGAEDV DE E Y+V++
Sbjct: 128 GCVSWMFDKKGLIVVS-KDADFEKLFEVALEAGAEDV---------ADE---EEQYEVLT 174
Query: 260 TSDNYTDITTKLREAGIPFETDNGSELLPITTIEDIHQNA 299
++ ++ L +AG E+ + ++P T ++ +NA
Sbjct: 175 DPSSFMEVREALEKAGFAHESAEIT-MIPQTMVKLDGKNA 213
>sp|A7FY22|Y3102_CLOB1 Probable transcriptional regulatory protein CLB_3102 OS=Clostridium
botulinum (strain ATCC 19397 / Type A) GN=CLB_3102 PE=3
SV=1
Length = 246
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 112/198 (56%), Gaps = 14/198 (7%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I +KG DAK+ K+++++GKE++ AVK+GGP+ SN L V+ KAK ++P D +ER+
Sbjct: 10 IQAKKGKVDAKRGKIFTKIGKEIVVAVKQGGPSADSNPRLRDVIAKAKANNMPNDTIERS 69
Query: 143 IKRASEKGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGS 201
IK+AS + E + YE YG G++++V+VLTD RS VR GG M G
Sbjct: 70 IKKASGELNAVDYETITYEGYGPAGIAVLVDVLTDNKNRSAGNVRYAFTKQGGNMGSTGC 129
Query: 202 VMFKFR-RARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVST 260
V F F+ + ++V K D+D+L+ +ALDAGAED + + Y V ++
Sbjct: 130 VSFMFQSKGQIVIEKKDGLDEDELMMMALDAGAEDF------------ESEDEVYAVTTS 177
Query: 261 SDNYTDITTKLREAGIPF 278
+++ + L G+ F
Sbjct: 178 QEDFGTVREALEAEGLEF 195
>sp|A5I6F4|Y3073_CLOBH Probable transcriptional regulatory protein CBO3073/CLC_2975
OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC
13319 / Type A) GN=CBO3073 PE=3 SV=1
Length = 246
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 112/198 (56%), Gaps = 14/198 (7%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I +KG DAK+ K+++++GKE++ AVK+GGP+ SN L V+ KAK ++P D +ER+
Sbjct: 10 IQAKKGKVDAKRGKIFTKIGKEIVVAVKQGGPSADSNPRLRDVIAKAKANNMPNDTIERS 69
Query: 143 IKRASEKGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGS 201
IK+AS + E + YE YG G++++V+VLTD RS VR GG M G
Sbjct: 70 IKKASGELNAVDYETITYEGYGPAGIAVLVDVLTDNKNRSAGNVRYAFTKQGGNMGSTGC 129
Query: 202 VMFKFR-RARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVST 260
V F F+ + ++V K D+D+L+ +ALDAGAED + + Y V ++
Sbjct: 130 VSFMFQSKGQIVIEKKDGLDEDELMMMALDAGAEDF------------ESEDEVYAVTTS 177
Query: 261 SDNYTDITTKLREAGIPF 278
+++ + L G+ F
Sbjct: 178 QEDFGTVREALEAEGLEF 195
>sp|Q8U9K1|Y3727_AGRT5 Probable transcriptional regulatory protein Atu3727
OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
GN=Atu3727 PE=3 SV=1
Length = 248
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 93/154 (60%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I RKG QD+ ++K++S++ +E+ A K G P+P N L ++ AK +PKD +ER
Sbjct: 10 IMHRKGKQDSVRSKMFSKLAREITVAAKTGMPDPNMNARLRLAIQNAKAQSMPKDNIERA 69
Query: 143 IKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSV 202
IK+AS E + E YE YG GGV++VVE LTD R+ + VR + GG + + GSV
Sbjct: 70 IKKASGADSENYDEVRYEGYGPGGVAVVVEALTDNRNRTASNVRSIFTKAGGALGETGSV 129
Query: 203 MFKFRRARVVNIKFTDADKDQLLDIALDAGAEDV 236
F F R + K D D++++ A++AGA+DV
Sbjct: 130 SFSFDRVGEITYKAEVGDADKVMEAAIEAGADDV 163
>sp|Q6FYQ2|Y1179_BARQU Probable transcriptional regulatory protein BQ11790 OS=Bartonella
quintana (strain Toulouse) GN=BQ11790 PE=3 SV=1
Length = 248
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 91/154 (59%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I RKG QDA ++K++S++ +E+ A K+G P+P N L ++ AK +PKD +ER
Sbjct: 10 IMHRKGRQDAMRSKIFSKLAREITVAAKQGAPDPAMNPRLRLAVQNAKAQSMPKDNIERA 69
Query: 143 IKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSV 202
IK+AS E + E YE YG GGV+++VE LTD R+ + VR GG + + GSV
Sbjct: 70 IKKASGNDVEHYDEVRYEGYGPGGVAVIVEALTDNRNRTASNVRAAFTKSGGALGETGSV 129
Query: 203 MFKFRRARVVNIKFTDADKDQLLDIALDAGAEDV 236
F F R + K D ++D A++AGAEDV
Sbjct: 130 SFMFHRIGEIIYKPAAGTADSIMDAAIEAGAEDV 163
>sp|Q891Z5|Y2215_CLOTE Probable transcriptional regulatory protein CTC_02215
OS=Clostridium tetani (strain Massachusetts / E88)
GN=CTC_02215 PE=3 SV=1
Length = 246
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 122/213 (57%), Gaps = 15/213 (7%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I +KG DAK+ K+++++G+E+I A K+GG NP +N+ L V+ KA+ ++P+D + R
Sbjct: 10 IQAKKGKMDAKRGKIFTKIGRELIIASKEGGSNPDTNSKLRDVIAKARANNMPQDTISRA 69
Query: 143 IKR-ASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGS 201
IK+ A E + E YE YG GV+ VV LTD R+ VR GG + + G
Sbjct: 70 IKKGAGELEGVNYEEMTYEGYGPNGVAFVVSTLTDNKNRTAGNVRAAFSKHGGNLGETGC 129
Query: 202 VMFKFR-RARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVST 260
V + F+ + +++ + D D+D+++ +ALDAGAED + +E +++++T
Sbjct: 130 VGWMFQSKGQMIIERNEDMDEDEIMMVALDAGAEDF------------ESSEEVFEIITT 177
Query: 261 SDNYTDITTKLREAGIPFETDNGSELLPITTIE 293
+++ ++ KL G F + + ++P TTIE
Sbjct: 178 PESFGEVREKLEAEGFEFISAEVT-MIPDTTIE 209
>sp|Q04FS7|Y768_OENOB Probable transcriptional regulatory protein OEOE_0768 OS=Oenococcus
oeni (strain ATCC BAA-331 / PSU-1) GN=OEOE_0768 PE=3
SV=1
Length = 240
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 98/157 (62%), Gaps = 3/157 (1%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I GRK AQDAK+ K++ ++ ++ A K GG +P++N L V++KAK ++PKD V+R
Sbjct: 10 IQGRKNAQDAKRGKIFQKISHDLYVAAKAGGADPSANASLRLVMDKAKAANMPKDNVQRA 69
Query: 143 IKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSV 202
+ +A+ G F E YE Y GG++++VE TD I R+V+ VR GG + GSV
Sbjct: 70 LDKATGAGDVKFEEATYEGYAPGGIAVLVETSTDNINRTVSNVRNSFNHHGGSLGTSGSV 129
Query: 203 MFKF-RRARVVNIKFTDAD--KDQLLDIALDAGAEDV 236
F+F RR V + + D +DQ+++ A++AGAEDV
Sbjct: 130 SFQFDRRGHFVIDRQSHPDITEDQVMEDAIEAGAEDV 166
>sp|B1IMF6|Y1467_CLOBK Probable transcriptional regulatory protein CLD_1467 OS=Clostridium
botulinum (strain Okra / Type B1) GN=CLD_1467 PE=3 SV=1
Length = 246
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 112/198 (56%), Gaps = 14/198 (7%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I +KG DAK+ K+++++GKE++ AVK+GGP+ SN L V+ KAK ++P D +ER+
Sbjct: 10 IQAKKGKADAKRGKIFTKIGKEIVVAVKQGGPSADSNPRLRDVIAKAKANNMPNDTIERS 69
Query: 143 IKRASEKGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGS 201
IK+AS + E + YE YG G++++V+VLTD RS VR GG M G
Sbjct: 70 IKKASGELNAVDYETITYEGYGPAGIAVLVDVLTDNKNRSAGNVRYAFTKQGGNMGSTGC 129
Query: 202 VMFKFR-RARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVST 260
V F F+ + ++V K D+D+L+ +ALDAGAED + + Y V ++
Sbjct: 130 VSFMFQSKGQIVIEKKDGLDEDELMMMALDAGAEDF------------ESEDEVYVVATS 177
Query: 261 SDNYTDITTKLREAGIPF 278
+++ + L G+ F
Sbjct: 178 QEDFGTVREALEAEGLEF 195
>sp|B8GUJ7|Y2237_THISH Probable transcriptional regulatory protein Tgr7_2237
OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=Tgr7_2237
PE=3 SV=1
Length = 249
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 118/200 (59%), Gaps = 13/200 (6%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RK AQDAK+ KL++++ KE+ A + GG + SN L ++KA + ++ KD VE
Sbjct: 8 ANIQHRKNAQDAKRGKLFTKLIKEITVAARMGGSDLNSNPRLRLAVDKALDANMTKDTVE 67
Query: 141 RNIKRASEKGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
R IKR + + + E++ YE YG GGV+I+V+ +TD R+VA VR CGG +
Sbjct: 68 RAIKRGAGELEGVNYEEIRYEGYGPGGVAIMVDTMTDNRNRTVAEVRHAFTKCGGNLGTD 127
Query: 200 GSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVS 259
GSV + F + V++ +D+D+++++AL+AGAEDV V +D + E V++
Sbjct: 128 GSVAYLFEKQGVLSYP-AGSDEDRIMEVALEAGAEDV---AVGDDGSIE--------VIT 175
Query: 260 TSDNYTDITTKLREAGIPFE 279
D+Y + + EAG+ E
Sbjct: 176 NPDDYEAVRAAMTEAGLKPE 195
>sp|C3KTD5|Y3338_CLOB6 Probable transcriptional regulatory protein CLJ_B3338
OS=Clostridium botulinum (strain 657 / Type Ba4)
GN=CLJ_B3338 PE=3 SV=1
Length = 246
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 112/198 (56%), Gaps = 14/198 (7%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I +KG DAK+ K+++++GKE++ AVK+GGP+ SN L V+ KAK ++P D +ER+
Sbjct: 10 IQAKKGKVDAKRGKIFTKIGKEIVVAVKQGGPSADSNPRLRDVIAKAKANNMPNDTIERS 69
Query: 143 IKRASEKGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGS 201
IK+AS + E + YE YG G++++V+VLTD RS VR GG M G
Sbjct: 70 IKKASGELNAVDYETITYEGYGPAGIAVLVDVLTDNKNRSAGNVRYAFTKQGGNMGSTGC 129
Query: 202 VMFKFR-RARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVST 260
V F F+ + ++V K D+D+L+ +ALDAGAED + + Y V ++
Sbjct: 130 VSFMFQSKGQIVIEKKDGLDEDELMMMALDAGAEDF------------ESEDEVYVVTTS 177
Query: 261 SDNYTDITTKLREAGIPF 278
+++ + L G+ F
Sbjct: 178 QEDFGTVREALEAEGLEF 195
>sp|A7GHU1|Y3132_CLOBL Probable transcriptional regulatory protein CLI_3132 OS=Clostridium
botulinum (strain Langeland / NCTC 10281 / Type F)
GN=CLI_3132 PE=3 SV=1
Length = 246
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 112/198 (56%), Gaps = 14/198 (7%)
Query: 83 IAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERN 142
I +KG DAK+ K+++++GKE++ AVK+GGP+ SN L V+ KAK ++P D +ER+
Sbjct: 10 IQAKKGKVDAKRGKIFTKIGKEIVVAVKQGGPSADSNPRLRDVIAKAKANNMPNDTIERS 69
Query: 143 IKRASEKGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGS 201
IK+AS + E + YE YG G++++V+VLTD RS VR GG M G
Sbjct: 70 IKKASGELNAVDYETITYEGYGPAGIAVLVDVLTDNKNRSAGNVRYAFTKQGGNMGSTGC 129
Query: 202 VMFKFR-RARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVST 260
V F F+ + ++V K D+D+L+ +ALDAGAED + + Y V ++
Sbjct: 130 VSFMFQSKGQIVIEKKDGLDEDELMMMALDAGAEDF------------ESEDEVYVVTTS 177
Query: 261 SDNYTDITTKLREAGIPF 278
+++ + L G+ F
Sbjct: 178 QEDFGTVREALEAEGLEF 195
>sp|Q609L3|Y1220_METCA Probable transcriptional regulatory protein MCA1220
OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB
11132 / Bath) GN=MCA1220 PE=3 SV=1
Length = 248
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 115/201 (57%), Gaps = 13/201 (6%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RKGAQDAK+ KL++++ +E+ A + GGP+P +N L ++KA ++ KD +E
Sbjct: 8 ANIQHRKGAQDAKRGKLFTKLIREITVASRTGGPDPGNNPRLRTAIDKALVANMSKDTIE 67
Query: 141 RNIKRASEKGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
R IK+ S E+V YE YG GG++++V+ LTD R+VA VR GG +
Sbjct: 68 RAIKKGSGAADGDNYEEVRYEGYGPGGIAVLVDCLTDNRNRTVAEVRHAFSKAGGNLGTD 127
Query: 200 GSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVS 259
GSV + F + VV+ D +D++++ ALDAGA+DV+ VNED + V++
Sbjct: 128 GSVAYLFSKTGVVSFS-ADLGEDRVMEPALDAGADDVV---VNEDGS--------VDVLT 175
Query: 260 TSDNYTDITTKLREAGIPFET 280
D + + L AG+ E+
Sbjct: 176 APDQFEAVRDALEAAGLTPES 196
>sp|Q8F839|Y720_LEPIN Probable transcriptional regulatory protein LA_0720 OS=Leptospira
interrogans serogroup Icterohaemorrhagiae serovar Lai
(strain 56601) GN=LA_0720 PE=3 SV=1
Length = 249
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 113/195 (57%), Gaps = 13/195 (6%)
Query: 86 RKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKR 145
+K A D+K+ +++R+GKE+ A K GG +P N L + KAK +++PKD +ER I++
Sbjct: 13 KKDAIDSKRGAIFTRVGKEITVAAKMGGGDPEGNPRLRLAILKAKSVNMPKDNIERAIRK 72
Query: 146 AS-EKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMF 204
+ E + E +YE +G GG++I+V +TDK +R+ ++ ++ GG +A GSV
Sbjct: 73 GTGELEGVTYEECLYECFGPGGIAIMVSAVTDKKSRTTPEIKSILTKLGGSLATSGSVSR 132
Query: 205 KFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNY 264
F + V+ ++ + +D+L+D+A+ GAEDVI NE D Y+V+S DNY
Sbjct: 133 LFEKKGVIVLESSQISEDELVDVAVGGGAEDVI----NEGDV--------YRVISVPDNY 180
Query: 265 TDITTKLREAGIPFE 279
+ L E G+ E
Sbjct: 181 ETVLHALNEKGLKSE 195
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,898,431
Number of Sequences: 539616
Number of extensions: 4428069
Number of successful extensions: 18750
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 17110
Number of HSP's gapped (non-prelim): 868
length of query: 305
length of database: 191,569,459
effective HSP length: 117
effective length of query: 188
effective length of database: 128,434,387
effective search space: 24145664756
effective search space used: 24145664756
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)