Query 021963
Match_columns 305
No_of_seqs 209 out of 1504
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 11:57:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021963.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021963hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w85_B Pyruvate dehydrogenase 100.0 8.2E-62 2.8E-66 454.5 27.8 265 39-304 2-268 (324)
2 1umd_B E1-beta, 2-OXO acid deh 100.0 2.8E-61 9.5E-66 451.0 26.3 265 39-304 3-269 (324)
3 2bfd_B 2-oxoisovalerate dehydr 100.0 9E-61 3.1E-65 450.5 25.1 268 37-304 18-287 (342)
4 1ik6_A Pyruvate dehydrogenase; 100.0 5.4E-60 1.8E-64 448.9 23.2 282 18-304 25-313 (369)
5 1qs0_B 2-oxoisovalerate dehydr 100.0 7.1E-59 2.4E-63 437.0 26.2 262 39-304 4-283 (338)
6 2ozl_B PDHE1-B, pyruvate dehyd 100.0 1.1E-58 3.6E-63 436.0 25.7 267 37-304 12-283 (341)
7 3mos_A Transketolase, TK; thia 100.0 3.6E-51 1.2E-55 411.2 25.1 249 37-302 310-563 (616)
8 2o1x_A 1-deoxy-D-xylulose-5-ph 100.0 6E-49 2E-53 396.6 25.8 243 39-302 321-565 (629)
9 3l84_A Transketolase; TKT, str 100.0 2.3E-49 7.7E-54 398.0 21.8 250 38-305 336-593 (632)
10 2o1s_A 1-deoxy-D-xylulose-5-ph 100.0 1.9E-48 6.4E-53 392.6 26.8 244 38-302 317-562 (621)
11 3m49_A Transketolase; alpha-be 100.0 7.2E-49 2.5E-53 397.5 20.8 255 36-304 375-646 (690)
12 3uk1_A Transketolase; structur 100.0 1.4E-48 4.8E-53 396.2 20.7 254 37-305 392-667 (711)
13 3rim_A Transketolase, TK; TPP, 100.0 2.6E-48 9E-53 393.3 21.8 253 38-304 373-654 (700)
14 3kom_A Transketolase; rossmann 100.0 3.1E-48 1.1E-52 391.9 22.0 254 37-305 352-619 (663)
15 1gpu_A Transketolase; transfer 100.0 1.7E-47 5.7E-52 388.6 22.6 254 37-305 353-624 (680)
16 2r8o_A Transketolase 1, TK 1; 100.0 2.6E-47 8.8E-52 386.8 19.8 253 37-304 352-619 (669)
17 1itz_A Transketolase; calvin c 100.0 9.6E-47 3.3E-51 382.7 23.6 253 37-304 363-632 (675)
18 1r9j_A Transketolase; domains, 100.0 8.2E-47 2.8E-51 383.0 20.0 253 37-305 349-615 (673)
19 2e6k_A Transketolase; structur 100.0 1.4E-46 4.9E-51 380.2 19.9 254 37-305 346-611 (651)
20 2jgd_A 2-oxoglutarate dehydrog 100.0 2.7E-45 9.2E-50 380.3 22.6 288 4-301 553-877 (933)
21 2yic_A 2-oxoglutarate decarbox 100.0 3.6E-43 1.2E-47 362.5 21.1 287 4-301 480-813 (868)
22 2xt6_A 2-oxoglutarate decarbox 100.0 9.9E-43 3.4E-47 367.0 21.6 287 4-301 725-1058(1113)
23 2qtc_A Pyruvate dehydrogenase 100.0 4.2E-39 1.4E-43 332.8 17.8 234 38-283 490-769 (886)
24 3ahc_A Phosphoketolase, xylulo 100.0 1E-34 3.5E-39 296.0 16.0 252 40-301 429-726 (845)
25 1yd7_A 2-keto acid:ferredoxin 99.9 8.7E-27 3E-31 222.9 9.3 245 40-304 23-356 (395)
26 2c42_A Pyruvate-ferredoxin oxi 99.9 3.2E-20 1.1E-24 198.2 23.0 210 82-302 50-332 (1231)
27 3ju3_A Probable 2-oxoacid ferr 99.5 5.6E-15 1.9E-19 117.9 7.0 67 237-303 12-78 (118)
28 3eya_A Pyruvate dehydrogenase 96.3 0.089 3E-06 51.5 15.3 116 86-213 42-164 (549)
29 1v5e_A Pyruvate oxidase; oxido 95.7 0.046 1.6E-06 54.1 10.3 115 87-214 45-167 (590)
30 1ozh_A ALS, acetolactate synth 95.3 0.17 5.8E-06 49.7 12.9 154 40-213 11-172 (566)
31 1ybh_A Acetolactate synthase, 95.2 0.12 4E-06 51.1 11.3 115 86-212 51-173 (590)
32 2iht_A Carboxyethylarginine sy 95.0 0.15 5E-06 50.3 11.2 153 40-213 12-173 (573)
33 2uz1_A Benzaldehyde lyase; thi 94.9 0.17 5.6E-06 49.7 11.1 152 40-211 4-164 (563)
34 2nxw_A Phenyl-3-pyruvate decar 94.5 0.66 2.2E-05 45.5 14.3 160 37-215 18-190 (565)
35 2vbi_A Pyruvate decarboxylase; 94.1 0.54 1.8E-05 46.0 12.9 115 86-213 42-171 (566)
36 4feg_A Pyruvate oxidase; carba 94.1 0.32 1.1E-05 48.2 11.3 158 38-213 9-173 (603)
37 2wvg_A PDC, pyruvate decarboxy 94.1 0.56 1.9E-05 45.9 12.9 115 86-213 42-171 (568)
38 3hww_A 2-succinyl-5-enolpyruvy 93.9 0.85 2.9E-05 44.5 13.7 114 87-211 48-171 (556)
39 1q6z_A BFD, BFDC, benzoylforma 93.7 0.19 6.4E-06 48.9 8.7 116 86-213 39-163 (528)
40 1t9b_A Acetolactate synthase, 93.7 0.34 1.2E-05 48.8 10.7 114 87-212 122-243 (677)
41 2pgn_A Cyclohexane-1,2-dione h 93.4 0.28 9.6E-06 48.4 9.5 113 87-212 45-166 (589)
42 2pan_A Glyoxylate carboligase; 93.2 0.4 1.4E-05 47.5 10.1 154 40-212 27-189 (616)
43 2c31_A Oxalyl-COA decarboxylas 92.7 0.29 1E-05 48.0 8.2 155 39-213 9-173 (568)
44 2q28_A Oxalyl-COA decarboxylas 92.2 0.37 1.3E-05 47.2 8.3 154 40-213 8-171 (564)
45 2x7j_A 2-succinyl-5-enolpyruvy 91.7 0.49 1.7E-05 46.8 8.6 116 86-212 70-199 (604)
46 3lq1_A 2-succinyl-5-enolpyruvy 90.4 1.9 6.4E-05 42.3 11.3 115 86-211 50-178 (578)
47 1t9b_A Acetolactate synthase, 88.7 1.8 6E-05 43.5 9.8 149 44-206 464-631 (677)
48 2vk8_A Pyruvate decarboxylase 87.1 2.6 8.9E-05 41.0 9.7 114 87-213 44-172 (563)
49 1ovm_A Indole-3-pyruvate decar 86.7 3.2 0.00011 40.2 10.1 113 87-213 45-172 (552)
50 2vbf_A Branched-chain alpha-ke 86.0 2.7 9.2E-05 41.0 9.2 112 87-212 65-191 (570)
51 3eya_A Pyruvate dehydrogenase 76.3 8 0.00028 37.4 8.5 112 85-206 396-523 (549)
52 2c31_A Oxalyl-COA decarboxylas 75.0 11 0.00039 36.5 9.2 111 85-206 416-541 (568)
53 3fni_A Putative diflavin flavo 74.3 6.7 0.00023 31.4 6.2 49 247-297 16-64 (159)
54 3rpe_A MDAB, modulator of drug 74.3 14 0.00048 31.5 8.6 50 251-302 47-96 (218)
55 1ybh_A Acetolactate synthase, 72.8 7.9 0.00027 37.9 7.5 112 85-206 416-552 (590)
56 3fz4_A Putative arsenate reduc 72.2 8.2 0.00028 29.6 6.0 43 248-291 11-53 (120)
57 3l78_A Regulatory protein SPX; 72.1 8.6 0.00029 29.4 6.1 42 248-290 8-49 (120)
58 1rw1_A Conserved hypothetical 71.4 6.1 0.00021 29.8 5.1 49 241-291 2-50 (114)
59 1z3e_A Regulatory protein SPX; 70.6 13 0.00045 28.7 7.0 46 241-288 3-48 (132)
60 5nul_A Flavodoxin; electron tr 70.2 9.3 0.00032 29.2 6.0 48 246-300 9-56 (138)
61 3hww_A 2-succinyl-5-enolpyruvy 70.1 10 0.00034 36.8 7.5 29 178-206 505-533 (556)
62 4feg_A Pyruvate oxidase; carba 69.9 7.3 0.00025 38.3 6.5 112 85-206 410-540 (603)
63 3ipz_A Monothiol glutaredoxin- 69.5 3.6 0.00012 30.8 3.3 37 238-274 17-57 (109)
64 1wik_A Thioredoxin-like protei 69.3 5.6 0.00019 29.5 4.4 37 238-274 14-54 (109)
65 3hly_A Flavodoxin-like domain; 69.2 11 0.00036 30.2 6.3 51 247-300 12-62 (161)
66 3gkx_A Putative ARSC family re 69.1 7.5 0.00025 29.8 5.1 49 241-291 6-54 (120)
67 2uz1_A Benzaldehyde lyase; thi 67.1 27 0.00091 33.8 9.9 111 85-206 409-540 (563)
68 2kok_A Arsenate reductase; bru 67.0 9.3 0.00032 29.1 5.3 49 241-291 7-55 (120)
69 3kkj_A Amine oxidase, flavin-c 66.5 5.1 0.00017 32.7 4.0 31 239-272 3-33 (336)
70 3rdw_A Putative arsenate reduc 66.5 8.5 0.00029 29.5 5.0 49 241-291 7-55 (121)
71 1ozh_A ALS, acetolactate synth 66.3 11 0.00039 36.5 7.0 112 85-206 410-537 (566)
72 2vzf_A NADH-dependent FMN redu 65.9 11 0.00039 30.9 6.0 56 247-302 16-82 (197)
73 3zyw_A Glutaredoxin-3; metal b 65.8 4.7 0.00016 30.4 3.3 37 238-274 15-55 (111)
74 2wci_A Glutaredoxin-4; redox-a 65.3 4.8 0.00016 31.7 3.4 36 239-274 35-74 (135)
75 3f2v_A General stress protein 64.8 19 0.00067 29.8 7.3 51 252-302 18-71 (192)
76 1sqs_A Conserved hypothetical 63.9 16 0.00054 31.1 6.8 56 247-302 15-92 (242)
77 2pan_A Glyoxylate carboligase; 63.9 10 0.00034 37.3 6.1 112 85-206 432-574 (616)
78 4dik_A Flavoprotein; TM0755, e 63.1 11 0.00039 35.2 6.1 57 242-298 268-328 (410)
79 3f0i_A Arsenate reductase; str 62.8 7.1 0.00024 29.9 3.9 43 248-291 12-54 (119)
80 2q62_A ARSH; alpha/beta, flavo 62.5 19 0.00063 31.2 7.0 52 250-302 51-111 (247)
81 3m49_A Transketolase; alpha-be 62.4 24 0.00082 35.4 8.6 101 98-208 145-269 (690)
82 2q28_A Oxalyl-COA decarboxylas 61.6 20 0.00069 34.6 7.8 111 85-206 411-538 (564)
83 2a5l_A Trp repressor binding p 60.6 14 0.00049 29.9 5.7 55 246-301 16-83 (200)
84 3uk1_A Transketolase; structur 59.3 23 0.00078 35.7 7.8 101 98-208 160-283 (711)
85 1t0i_A YLR011WP; FMN binding p 59.0 22 0.00074 28.8 6.5 56 247-302 14-97 (191)
86 1v5e_A Pyruvate oxidase; oxido 58.9 23 0.00078 34.6 7.7 111 85-206 403-533 (590)
87 4bby_A Alkyldihydroxyacetoneph 58.0 48 0.0016 32.9 9.9 98 165-266 189-297 (658)
88 1ovm_A Indole-3-pyruvate decar 57.4 34 0.0012 32.8 8.6 99 97-206 412-526 (552)
89 2amj_A Modulator of drug activ 57.4 21 0.00073 29.6 6.3 49 252-302 35-83 (204)
90 2fzv_A Putative arsenical resi 56.8 21 0.00073 31.6 6.4 52 249-300 74-134 (279)
91 1q6z_A BFD, BFDC, benzoylforma 56.3 28 0.00096 33.3 7.7 112 85-206 392-519 (528)
92 2fz5_A Flavodoxin; alpha/beta 56.0 23 0.0008 26.6 5.9 47 247-300 11-57 (137)
93 3l4e_A Uncharacterized peptida 55.1 19 0.00067 30.2 5.7 55 238-295 27-85 (206)
94 3lyu_A Putative hydrogenase; t 55.0 18 0.00062 28.2 5.1 49 237-285 17-66 (142)
95 2lqo_A Putative glutaredoxin R 54.5 24 0.00084 25.5 5.4 56 239-299 4-64 (92)
96 3llv_A Exopolyphosphatase-rela 54.0 28 0.00097 26.4 6.1 32 238-272 6-37 (141)
97 3lq1_A 2-succinyl-5-enolpyruvy 54.0 33 0.0011 33.3 7.8 29 178-206 526-554 (578)
98 1s3c_A Arsenate reductase; ARS 53.3 16 0.00056 28.7 4.6 48 241-290 4-51 (141)
99 2x7j_A 2-succinyl-5-enolpyruvy 52.9 10 0.00035 37.2 4.0 29 178-206 546-574 (604)
100 2iht_A Carboxyethylarginine sy 52.8 15 0.00052 35.6 5.2 112 85-206 426-555 (573)
101 2wem_A Glutaredoxin-related pr 52.7 20 0.00069 27.2 4.9 37 238-274 19-60 (118)
102 1t1v_A SH3BGRL3, SH3 domain-bi 52.4 22 0.00074 25.2 4.8 63 240-304 3-74 (93)
103 2ab1_A Hypothetical protein; H 51.9 4.9 0.00017 31.2 1.2 40 235-274 58-99 (122)
104 2vbi_A Pyruvate decarboxylase; 50.9 23 0.00077 34.3 6.1 27 180-206 500-527 (566)
105 3f6r_A Flavodoxin; FMN binding 50.4 22 0.00074 27.4 4.9 45 246-297 12-57 (148)
106 1f4p_A Flavodoxin; electron tr 50.0 23 0.00078 27.2 5.0 46 247-299 12-58 (147)
107 1ydg_A Trp repressor binding p 49.4 19 0.00065 29.6 4.7 36 240-275 8-46 (211)
108 2o1x_A 1-deoxy-D-xylulose-5-ph 48.5 66 0.0023 31.6 9.1 25 183-207 260-284 (629)
109 3q2o_A Phosphoribosylaminoimid 48.4 38 0.0013 30.8 7.0 60 236-299 12-84 (389)
110 1rtt_A Conserved hypothetical 48.3 12 0.00042 30.4 3.3 50 251-301 24-84 (193)
111 1u6t_A SH3 domain-binding glut 48.1 29 0.001 26.7 5.1 49 252-304 18-78 (121)
112 3hh1_A Tetrapyrrole methylase 46.5 11 0.00036 28.6 2.4 35 236-270 77-114 (117)
113 2wvg_A PDC, pyruvate decarboxy 46.3 61 0.0021 31.2 8.4 27 180-206 508-535 (568)
114 3gx8_A Monothiol glutaredoxin- 46.1 24 0.00082 26.8 4.4 36 238-273 15-57 (121)
115 2vbf_A Branched-chain alpha-ke 46.0 61 0.0021 31.2 8.3 100 97-206 429-545 (570)
116 3jx9_A Putative phosphoheptose 45.7 44 0.0015 27.3 6.2 85 187-272 24-112 (170)
117 1r9j_A Transketolase; domains, 45.6 75 0.0026 31.6 9.1 87 112-208 150-246 (673)
118 2x5n_A SPRPN10, 26S proteasome 45.6 42 0.0014 27.6 6.2 48 250-299 121-173 (192)
119 2e85_A Hydrogenase 3 maturatio 44.6 59 0.002 25.9 6.8 56 240-299 5-67 (159)
120 3fwz_A Inner membrane protein 44.5 26 0.00089 26.8 4.5 31 239-272 8-38 (140)
121 3ic4_A Glutaredoxin (GRX-1); s 44.4 14 0.00049 25.8 2.7 37 240-277 13-49 (92)
122 1cfz_A Hydrogenase 2 maturatio 44.4 45 0.0015 26.7 6.0 56 240-299 2-64 (162)
123 3orq_A N5-carboxyaminoimidazol 44.0 44 0.0015 30.4 6.6 59 236-298 10-81 (377)
124 2zki_A 199AA long hypothetical 43.4 60 0.0021 26.1 6.8 55 246-301 14-82 (199)
125 3b6i_A Flavoprotein WRBA; flav 43.0 51 0.0017 26.4 6.3 30 246-275 12-42 (198)
126 3l84_A Transketolase; TKT, str 42.4 61 0.0021 32.1 7.7 99 98-208 119-238 (632)
127 2o1s_A 1-deoxy-D-xylulose-5-ph 41.7 1.2E+02 0.004 29.7 9.7 25 183-207 255-279 (621)
128 3u7r_A NADPH-dependent FMN red 41.4 58 0.002 26.8 6.4 53 249-301 17-79 (190)
129 1ycg_A Nitric oxide reductase; 41.3 54 0.0018 29.5 6.8 58 241-301 253-314 (398)
130 3lrx_A Putative hydrogenase; a 41.2 37 0.0013 26.8 5.0 50 237-286 22-72 (158)
131 1v95_A Nuclear receptor coacti 40.7 80 0.0027 24.6 6.7 58 240-298 10-69 (130)
132 2ohh_A Type A flavoprotein FPR 40.7 48 0.0016 30.0 6.3 54 242-298 259-316 (404)
133 3qmx_A Glutaredoxin A, glutare 40.6 20 0.00069 26.1 3.0 36 238-274 15-50 (99)
134 1w85_A Pyruvate dehydrogenase 40.5 98 0.0033 28.3 8.4 33 174-207 226-262 (368)
135 3pl5_A SMU_165, putative uncha 40.4 95 0.0033 27.9 8.1 68 42-110 100-177 (320)
136 3tem_A Ribosyldihydronicotinam 40.4 39 0.0013 28.6 5.3 27 249-275 17-43 (228)
137 4gi5_A Quinone reductase; prot 39.9 41 0.0014 29.7 5.5 53 250-302 39-125 (280)
138 3kom_A Transketolase; rossmann 39.1 93 0.0032 30.9 8.5 107 90-208 114-245 (663)
139 2wul_A Glutaredoxin related pr 38.9 44 0.0015 25.5 4.8 36 238-273 19-59 (118)
140 3g8r_A Probable spore coat pol 38.5 82 0.0028 28.8 7.4 63 242-304 138-207 (350)
141 2nys_A AGR_C_3712P; SSPB, stri 38.1 7.3 0.00025 32.1 0.2 71 41-116 15-97 (176)
142 1ykg_A SIR-FP, sulfite reducta 38.1 38 0.0013 26.8 4.6 30 247-276 21-50 (167)
143 3mos_A Transketolase, TK; thia 38.1 1.4E+02 0.0048 29.3 9.6 97 98-207 126-237 (616)
144 2pgn_A Cyclohexane-1,2-dione h 38.0 26 0.00088 34.1 4.2 112 85-206 414-541 (589)
145 2ct6_A SH3 domain-binding glut 38.0 36 0.0012 25.1 4.2 34 240-274 9-48 (111)
146 4e4t_A Phosphoribosylaminoimid 37.7 57 0.0019 30.2 6.4 58 236-297 33-103 (419)
147 2fvt_A Conserved hypothetical 37.2 13 0.00043 29.4 1.5 37 238-274 67-104 (135)
148 2nxw_A Phenyl-3-pyruvate decar 37.0 70 0.0024 30.8 7.1 144 44-206 377-536 (565)
149 1t5b_A Acyl carrier protein ph 37.0 96 0.0033 24.7 7.1 56 247-302 16-99 (201)
150 2qas_A SSPB, hypothetical prot 36.9 6.3 0.00022 31.9 -0.4 71 41-116 23-105 (157)
151 1aba_A Glutaredoxin; electron 36.7 86 0.0029 21.5 5.9 27 249-275 13-39 (87)
152 3k5i_A Phosphoribosyl-aminoimi 36.6 82 0.0028 28.9 7.3 56 237-297 23-93 (403)
153 3gx1_A LIN1832 protein; APC633 36.3 1.2E+02 0.0039 23.3 7.0 62 240-302 6-74 (130)
154 4a5l_A Thioredoxin reductase; 36.2 57 0.0019 27.9 5.8 44 237-283 151-194 (314)
155 2fi9_A Outer membrane protein; 36.2 13 0.00044 29.0 1.3 37 238-274 68-105 (128)
156 3hr4_A Nitric oxide synthase, 36.1 33 0.0011 29.2 4.1 38 239-276 40-80 (219)
157 2bmv_A Flavodoxin; electron tr 36.0 55 0.0019 25.6 5.3 47 242-296 4-51 (164)
158 3nyi_A FAT acid-binding protei 35.7 99 0.0034 27.3 7.4 68 42-110 69-146 (297)
159 2gm2_A Conserved hypothetical 35.7 12 0.00042 29.3 1.2 40 235-274 61-101 (132)
160 1xmp_A PURE, phosphoribosylami 35.5 1.5E+02 0.005 24.2 7.6 48 239-288 12-60 (170)
161 3nzn_A Glutaredoxin; structura 35.4 52 0.0018 23.6 4.7 38 239-277 22-59 (103)
162 1id1_A Putative potassium chan 35.3 43 0.0015 25.8 4.5 33 238-273 3-35 (153)
163 2e6k_A Transketolase; structur 35.2 1E+02 0.0035 30.4 8.1 36 171-207 207-245 (651)
164 3oz2_A Digeranylgeranylglycero 34.7 31 0.0011 30.5 3.9 31 240-273 6-36 (397)
165 2yan_A Glutaredoxin-3; oxidore 34.6 25 0.00086 25.5 2.8 36 239-274 17-56 (105)
166 3fvw_A Putative NAD(P)H-depend 34.6 73 0.0025 25.9 5.9 52 250-302 19-80 (192)
167 3h8q_A Thioredoxin reductase 3 34.2 84 0.0029 23.0 5.8 37 238-275 16-52 (114)
168 2ywl_A Thioredoxin reductase r 34.2 41 0.0014 26.4 4.2 31 240-273 3-33 (180)
169 4gcm_A TRXR, thioredoxin reduc 34.1 37 0.0013 29.4 4.2 30 240-272 8-37 (312)
170 2bfd_A 2-oxoisovalerate dehydr 34.0 1.2E+02 0.0041 28.0 7.9 25 183-207 254-282 (400)
171 3mcu_A Dipicolinate synthase, 33.9 24 0.00082 29.8 2.8 40 237-276 4-45 (207)
172 3rim_A Transketolase, TK; TPP, 33.9 1.1E+02 0.0039 30.6 8.2 39 171-210 225-267 (700)
173 3cpk_A Uncharacterized protein 33.4 17 0.00057 29.3 1.6 37 238-274 88-125 (150)
174 2hpv_A FMN-dependent NADH-azor 33.3 85 0.0029 25.4 6.2 55 248-302 18-107 (208)
175 1e5d_A Rubredoxin\:oxygen oxid 33.1 95 0.0032 27.9 7.1 57 242-301 255-315 (402)
176 1u11_A PURE (N5-carboxyaminoim 32.9 1.7E+02 0.0059 24.1 7.7 48 239-288 22-70 (182)
177 2ark_A Flavodoxin; FMN, struct 32.4 67 0.0023 25.8 5.3 47 247-300 16-63 (188)
178 3gdw_A Sigma-54 interaction do 32.2 1.4E+02 0.0048 23.2 7.0 62 240-302 6-76 (139)
179 3kuu_A Phosphoribosylaminoimid 32.2 1.9E+02 0.0066 23.6 7.9 48 239-288 13-61 (174)
180 1itz_A Transketolase; calvin c 32.0 1.2E+02 0.0043 30.0 8.1 37 171-208 216-257 (675)
181 1edz_A 5,10-methylenetetrahydr 31.9 68 0.0023 28.9 5.6 57 237-295 176-251 (320)
182 4hs4_A Chromate reductase; tri 31.1 56 0.0019 26.9 4.7 50 253-303 26-87 (199)
183 3nnk_A Ureidoglycine-glyoxylat 30.6 1.4E+02 0.0046 26.5 7.6 21 279-299 156-176 (411)
184 1gpu_A Transketolase; transfer 30.6 1.1E+02 0.0038 30.4 7.5 36 171-207 205-245 (680)
185 1atz_A VON willebrand factor; 30.6 37 0.0013 27.1 3.4 55 241-297 112-168 (189)
186 3f0h_A Aminotransferase; RER07 30.6 1E+02 0.0034 27.0 6.7 22 278-299 161-182 (376)
187 3le1_A Phosphotransferase syst 30.4 61 0.0021 23.2 4.2 31 235-265 55-85 (88)
188 3c85_A Putative glutathione-re 30.2 54 0.0018 26.0 4.3 32 238-272 39-71 (183)
189 2q9u_A A-type flavoprotein; fl 30.0 1.1E+02 0.0039 27.6 7.1 52 247-301 268-319 (414)
190 3ors_A N5-carboxyaminoimidazol 29.9 2.2E+02 0.0075 23.0 7.8 48 239-288 4-52 (163)
191 3dfz_A SIRC, precorrin-2 dehyd 29.9 1E+02 0.0036 26.0 6.3 34 237-273 30-63 (223)
192 4hqo_A Sporozoite surface prot 29.5 62 0.0021 27.7 4.9 47 241-289 129-177 (266)
193 3r6w_A FMN-dependent NADH-azor 29.1 1.6E+02 0.0054 24.0 7.2 54 249-302 18-100 (212)
194 3pu6_A Uncharacterized protein 28.9 1.2E+02 0.0042 24.0 6.2 55 240-298 4-64 (157)
195 2vdc_G Glutamate synthase [NAD 28.8 45 0.0015 31.3 4.1 34 237-273 121-154 (456)
196 2r8o_A Transketolase 1, TK 1; 28.7 1.4E+02 0.0049 29.5 7.9 36 171-207 203-242 (669)
197 3sr3_A Microcin immunity prote 28.7 36 0.0012 30.8 3.3 36 234-269 9-49 (336)
198 3trh_A Phosphoribosylaminoimid 28.7 1.7E+02 0.006 23.7 7.0 48 239-288 7-55 (169)
199 3fys_A Protein DEGV; fatty aci 28.5 1.4E+02 0.0048 26.6 7.2 68 42-110 99-172 (315)
200 4a5l_A Thioredoxin reductase; 28.1 44 0.0015 28.7 3.6 30 240-272 6-35 (314)
201 2g1u_A Hypothetical protein TM 28.0 61 0.0021 25.0 4.2 33 237-272 18-50 (155)
202 4hqf_A Thrombospondin-related 28.0 81 0.0028 27.1 5.4 56 241-298 132-194 (281)
203 2c42_A Pyruvate-ferredoxin oxi 27.8 4.3E+02 0.015 28.2 11.8 31 176-206 1033-1064(1231)
204 3tnl_A Shikimate dehydrogenase 27.8 87 0.003 28.0 5.6 34 237-273 153-187 (315)
205 3n2n_F Anthrax toxin receptor 27.7 27 0.00093 27.6 2.0 56 240-298 109-168 (185)
206 3fbs_A Oxidoreductase; structu 27.7 56 0.0019 27.5 4.2 31 239-272 3-33 (297)
207 2wqp_A Polysialic acid capsule 27.5 1.9E+02 0.0065 26.3 7.9 61 242-302 151-218 (349)
208 2l69_A Rossmann 2X3 fold prote 27.5 1.2E+02 0.0041 22.2 5.3 49 241-292 3-51 (134)
209 3rg8_A Phosphoribosylaminoimid 27.1 2E+02 0.0069 23.1 7.1 42 240-282 4-46 (159)
210 4dgk_A Phytoene dehydrogenase; 27.0 44 0.0015 31.1 3.7 31 239-272 2-32 (501)
211 3en0_A Cyanophycinase; serine 26.8 57 0.002 28.9 4.2 57 239-295 57-116 (291)
212 3l9w_A Glutathione-regulated p 26.8 60 0.0021 30.1 4.5 33 238-273 4-36 (413)
213 3isl_A Purine catabolism prote 26.7 1.7E+02 0.0058 25.8 7.5 24 277-300 152-175 (416)
214 3kgw_A Alanine-glyoxylate amin 26.7 1.7E+02 0.006 25.4 7.6 20 280-299 167-186 (393)
215 3tla_A MCCF; serine protease, 26.4 41 0.0014 31.0 3.3 37 234-270 39-80 (371)
216 3itj_A Thioredoxin reductase 1 26.3 49 0.0017 28.6 3.6 31 239-272 23-53 (338)
217 2gqw_A Ferredoxin reductase; f 26.3 99 0.0034 28.1 5.9 51 237-290 144-200 (408)
218 4h1h_A LMO1638 protein; MCCF-l 26.2 44 0.0015 30.1 3.4 36 234-269 8-48 (327)
219 2cul_A Glucose-inhibited divis 26.1 66 0.0023 26.7 4.3 32 239-273 4-35 (232)
220 3f8d_A Thioredoxin reductase ( 25.9 62 0.0021 27.6 4.2 32 239-273 16-47 (323)
221 2aef_A Calcium-gated potassium 25.6 54 0.0018 27.3 3.7 31 238-272 9-39 (234)
222 1shu_X Anthrax toxin receptor 25.5 71 0.0024 24.9 4.2 46 251-299 121-166 (182)
223 1xhc_A NADH oxidase /nitrite r 25.4 92 0.0032 27.9 5.5 50 237-289 142-195 (367)
224 1vk8_A Hypothetical protein TM 25.3 1E+02 0.0034 23.1 4.7 51 240-290 19-72 (106)
225 3nhv_A BH2092 protein; alpha-b 25.3 45 0.0015 25.9 2.9 35 237-271 71-105 (144)
226 3foj_A Uncharacterized protein 25.3 55 0.0019 23.3 3.2 30 237-268 55-84 (100)
227 1xhc_A NADH oxidase /nitrite r 25.2 43 0.0015 30.2 3.2 36 236-275 6-41 (367)
228 3ha2_A NADPH-quinone reductase 25.1 1.5E+02 0.0051 23.9 6.2 37 264-302 28-64 (177)
229 3ax6_A Phosphoribosylaminoimid 25.0 1.6E+02 0.0054 26.3 7.0 54 240-297 3-69 (380)
230 3lqk_A Dipicolinate synthase s 24.9 39 0.0013 28.3 2.6 42 237-278 6-53 (201)
231 1vli_A Spore coat polysacchari 24.8 1.8E+02 0.0063 26.8 7.3 62 241-302 160-229 (385)
232 3pp8_A Glyoxylate/hydroxypyruv 24.8 1.8E+02 0.0062 25.8 7.2 54 237-294 138-198 (315)
233 3flh_A Uncharacterized protein 24.8 33 0.0011 25.8 1.9 32 238-269 71-102 (124)
234 2q0l_A TRXR, thioredoxin reduc 24.8 1.1E+02 0.0039 25.9 5.8 47 237-286 142-188 (311)
235 3lp6_A Phosphoribosylaminoimid 24.1 2.9E+02 0.01 22.5 7.9 43 239-282 8-51 (174)
236 1ijb_A VON willebrand factor; 24.1 1E+02 0.0035 24.8 5.1 56 241-298 119-180 (202)
237 3r9u_A Thioredoxin reductase; 24.1 1.2E+02 0.004 25.7 5.7 50 237-289 146-195 (315)
238 3k7m_X 6-hydroxy-L-nicotine ox 24.0 57 0.002 29.5 3.8 30 240-272 3-32 (431)
239 2vk8_A Pyruvate decarboxylase 24.0 59 0.002 31.2 4.0 26 181-206 509-536 (563)
240 3svl_A Protein YIEF; E. coli C 23.8 47 0.0016 27.3 2.8 53 250-302 20-85 (193)
241 3fg2_P Putative rubredoxin red 23.7 79 0.0027 28.6 4.7 37 239-278 2-40 (404)
242 4fk1_A Putative thioredoxin re 23.4 74 0.0025 27.4 4.2 31 239-272 7-37 (304)
243 4b4t_W RPN10, 26S proteasome r 23.4 1E+02 0.0035 27.0 5.1 49 250-299 122-177 (268)
244 1fl2_A Alkyl hydroperoxide red 23.4 1.7E+02 0.0058 24.8 6.6 49 237-289 143-191 (310)
245 3dme_A Conserved exported prot 23.3 65 0.0022 28.1 3.9 32 239-273 5-36 (369)
246 3ndc_A Precorrin-4 C(11)-methy 23.3 41 0.0014 29.2 2.5 29 178-206 51-81 (264)
247 3zqu_A Probable aromatic acid 23.1 85 0.0029 26.4 4.4 34 239-272 5-39 (209)
248 4e5s_A MCCFLIKE protein (BA_56 23.0 48 0.0016 30.0 3.0 36 234-269 8-48 (331)
249 3ngx_A Bifunctional protein fo 23.0 70 0.0024 28.2 3.9 50 237-294 149-198 (276)
250 1y81_A Conserved hypothetical 22.9 1.5E+02 0.0052 22.7 5.6 57 238-301 69-125 (138)
251 3lzw_A Ferredoxin--NADP reduct 22.9 68 0.0023 27.5 3.9 32 239-273 8-39 (332)
252 3rhb_A ATGRXC5, glutaredoxin-C 22.9 1.2E+02 0.0043 21.7 4.9 38 239-277 19-56 (113)
253 4a9w_A Monooxygenase; baeyer-v 22.8 67 0.0023 27.8 3.9 32 239-273 4-35 (357)
254 3d0c_A Dihydrodipicolinate syn 22.6 1.6E+02 0.0054 26.1 6.4 31 264-297 137-167 (314)
255 2c5m_A CTP synthase; cytidine 22.5 61 0.0021 28.6 3.3 38 251-288 217-254 (294)
256 1p3y_1 MRSD protein; flavoprot 22.4 44 0.0015 27.8 2.4 35 238-272 8-43 (194)
257 1d4a_A DT-diaphorase, quinone 22.4 1.3E+02 0.0044 26.0 5.6 28 249-276 18-45 (273)
258 1yvv_A Amine oxidase, flavin-c 22.3 76 0.0026 27.4 4.1 32 239-273 3-34 (336)
259 1zl0_A Hypothetical protein PA 22.2 59 0.002 29.1 3.3 40 231-270 10-51 (311)
260 2qbu_A Precorrin-2 methyltrans 22.2 47 0.0016 27.8 2.6 15 238-253 122-136 (232)
261 1ryi_A Glycine oxidase; flavop 22.2 69 0.0024 28.3 3.9 33 239-274 18-50 (382)
262 2ch1_A 3-hydroxykynurenine tra 22.1 2.4E+02 0.0082 24.6 7.6 22 279-300 161-182 (396)
263 1ptf_A Histidine-containing ph 22.1 1.1E+02 0.0037 21.8 4.2 27 236-262 56-82 (88)
264 3ged_A Short-chain dehydrogena 22.1 2.1E+02 0.0073 24.3 6.9 49 241-296 4-52 (247)
265 1g63_A Epidermin modifying enz 22.0 71 0.0024 26.2 3.6 35 240-274 4-39 (181)
266 2vo1_A CTP synthase 1; pyrimid 21.9 77 0.0026 28.1 3.9 38 251-288 217-254 (295)
267 1lss_A TRK system potassium up 21.9 87 0.003 23.0 3.9 31 239-272 5-35 (140)
268 1vl0_A DTDP-4-dehydrorhamnose 21.9 1.4E+02 0.0049 25.1 5.8 50 240-289 12-61 (292)
269 3oow_A Phosphoribosylaminoimid 21.8 2.8E+02 0.0094 22.5 7.0 47 240-288 7-54 (166)
270 3lcm_A SMU.1420, putative oxid 21.8 1.2E+02 0.0042 24.6 5.1 52 250-302 17-86 (196)
271 2e0n_A Precorrin-2 C20-methylt 21.7 50 0.0017 28.3 2.7 19 281-299 164-182 (259)
272 1kyq_A Met8P, siroheme biosynt 21.7 1.1E+02 0.0036 26.9 4.9 35 237-274 12-46 (274)
273 2hmt_A YUAA protein; RCK, KTN, 21.6 1E+02 0.0035 22.7 4.3 32 238-272 6-37 (144)
274 1y51_A Phosphocarrier protein 21.6 1E+02 0.0035 21.9 4.0 27 236-262 56-82 (88)
275 3ibs_A Conserved hypothetical 21.5 1.1E+02 0.0036 24.8 4.7 58 241-298 115-197 (218)
276 1kkl_H Phosphocarrier protein 21.5 99 0.0034 22.8 4.0 65 187-262 28-94 (100)
277 3vrd_B FCCB subunit, flavocyto 21.3 67 0.0023 28.9 3.6 34 238-274 2-37 (401)
278 2ejb_A Probable aromatic acid 21.3 1E+02 0.0034 25.4 4.4 34 240-273 3-37 (189)
279 3cty_A Thioredoxin reductase; 21.3 86 0.0029 27.0 4.2 29 240-271 18-46 (319)
280 1sph_A Histidine-containing ph 21.3 1.1E+02 0.0037 21.8 4.0 27 236-262 56-82 (88)
281 2zbw_A Thioredoxin reductase; 21.2 86 0.0029 27.1 4.2 32 239-273 6-37 (335)
282 1hsk_A UDP-N-acetylenolpyruvoy 21.2 85 0.0029 28.1 4.2 77 180-265 51-131 (326)
283 3gk5_A Uncharacterized rhodane 21.1 88 0.003 22.6 3.7 32 237-270 54-85 (108)
284 3qjg_A Epidermin biosynthesis 21.1 70 0.0024 26.1 3.3 47 239-285 6-54 (175)
285 3eme_A Rhodanese-like domain p 21.1 57 0.0019 23.3 2.6 30 237-268 55-84 (103)
286 4a26_A Putative C-1-tetrahydro 21.0 1.3E+02 0.0044 26.8 5.3 36 237-274 164-199 (300)
287 4gx0_A TRKA domain protein; me 21.0 1.3E+02 0.0043 28.8 5.7 54 239-295 349-414 (565)
288 1vdc_A NTR, NADPH dependent th 21.0 1.3E+02 0.0045 25.8 5.5 49 237-288 158-206 (333)
289 3ipr_A PTS system, IIA compone 21.0 2.6E+02 0.0089 21.7 6.7 50 240-289 3-54 (150)
290 2dc1_A L-aspartate dehydrogena 21.0 2.2E+02 0.0075 23.5 6.7 61 237-301 49-112 (236)
291 1pch_A Phosphocarrier protein; 20.8 1E+02 0.0035 22.0 3.8 26 236-261 55-80 (88)
292 3tx1_A UDP-N-acetylenolpyruvoy 20.8 91 0.0031 28.0 4.3 28 180-207 57-84 (322)
293 1xky_A Dihydrodipicolinate syn 20.7 1.9E+02 0.0065 25.4 6.4 32 264-296 138-171 (301)
294 3sho_A Transcriptional regulat 20.7 81 0.0028 25.0 3.7 36 236-271 37-72 (187)
295 1ati_A Glycyl-tRNA synthetase; 20.7 1.4E+02 0.0048 28.5 5.9 56 239-297 399-459 (505)
296 1qe0_A Histidyl-tRNA synthetas 20.6 1.1E+02 0.0039 27.9 5.1 56 239-297 330-387 (420)
297 3e96_A Dihydrodipicolinate syn 20.5 2.1E+02 0.0072 25.3 6.7 32 264-298 137-168 (316)
298 2oln_A NIKD protein; flavoprot 20.4 88 0.003 27.9 4.2 33 239-274 5-37 (397)
299 2yxg_A DHDPS, dihydrodipicolin 20.4 1.9E+02 0.0064 25.2 6.3 37 263-299 125-163 (289)
300 2d59_A Hypothetical protein PH 20.2 2E+02 0.0069 22.0 5.9 48 238-291 77-124 (144)
301 2ehh_A DHDPS, dihydrodipicolin 20.2 2E+02 0.0068 25.1 6.4 62 238-299 95-163 (294)
302 3l4b_C TRKA K+ channel protien 20.1 81 0.0028 25.8 3.6 30 240-272 2-31 (218)
303 1htt_A Histidyl-tRNA synthetas 20.1 1.4E+02 0.0049 27.3 5.7 56 239-297 328-387 (423)
304 2bkw_A Alanine-glyoxylate amin 20.0 2.2E+02 0.0074 24.7 6.8 23 278-300 154-178 (385)
305 2huf_A Alanine glyoxylate amin 20.0 2.7E+02 0.0092 24.3 7.4 18 281-298 164-181 (393)
No 1
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=100.00 E-value=8.2e-62 Score=454.54 Aligned_cols=265 Identities=46% Similarity=0.781 Sum_probs=246.0
Q ss_pred cccHHHHHHHHHHHHHhcCCCEEEEecccC-CCcccccchhhHhhhCCCcEEecchhHHHHHHHHHHHHhCCCeEEEEec
Q 021963 39 SLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQ 117 (305)
Q Consensus 39 ~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~-~g~~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~AaGlA~~G~~p~~~~~ 117 (305)
+++||++++++|.+++++|++++++++|++ +++.++.++.|+++|||+||+|+||+|++|+++|+|+|++|+||++++|
T Consensus 2 ~~~~~~a~~~~L~~l~~~~~~vv~~~~d~~~~~g~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~a~G~A~~G~rp~~~~t 81 (324)
T 1w85_B 2 QMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQ 81 (324)
T ss_dssp EECHHHHHHHHHHHHHHHCTTEEEEETTCSTTCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHTTCEEEEBCS
T ss_pred cchHHHHHHHHHHHHHhHCcCEEEEcCcccccCCcchhHHHHHHHhCCCcEEEcchhHHHHHHHHHHHHhCCCEEEEEec
Confidence 368999999999999999999999999998 4666666789999999999999999999999999999999999999867
Q ss_pred ccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCCCchHHHHHccCCCcEEEeeCCHHHHHHHHHHh
Q 021963 118 FADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSC 197 (305)
Q Consensus 118 ~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a 197 (305)
|++|++|++|||++++|+++|+++++.++ |+|++++.|..+.+|+||+++|+++++++|||+|++|+|++|++.++++|
T Consensus 82 ~~~F~~~a~dqi~~~~a~~~~~~~g~~~~-pvv~~~~~g~~~~~g~~hs~~~~a~~~~iP~l~V~~Psd~~e~~~~l~~a 160 (324)
T 1w85_B 82 FFGFVYEVMDSICGQMARIRYRTGGRYHM-PITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISA 160 (324)
T ss_dssp SGGGGGGTHHHHHTTGGGHHHHTTTSSCC-CCEEEEEECSSSCCCTTSSCCCHHHHTTSTTCEEECCSSHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHhhhccCCCcC-CEEEEEeccCCCCCCCcccccHHHHHccCCCCEEEeeCCHHHHHHHHHHH
Confidence 99999999999999999999998888888 88888765667778999999999999999999999999999999999999
Q ss_pred HhCCCCEEEeccccccccCccCCCCCCCcccCCceEEeeeCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccC
Q 021963 198 IRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIP 277 (305)
Q Consensus 198 ~~~~~Pv~i~~~~~l~~~~~~~~~~~~~~~~~gk~~~~~~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P 277 (305)
+++++|++|++|++++|...+.++.+++.+++||++++++|.|++|||+|++++.|++|++.|+++|++++|||+++++|
T Consensus 161 ~~~~~Pv~i~~p~~l~r~~~~~~~~~~~~~~~Gk~~~~~~g~dv~iva~G~~~~~a~~Aa~~L~~~Gi~v~vi~~~~l~P 240 (324)
T 1w85_B 161 IRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQP 240 (324)
T ss_dssp HHSSSCEEEEEETTTSSSCCEECCSSCCCCCTTCCEEEECCSSEEEEECTTHHHHHHHHHHHHHHTTCCEEEEECSEEES
T ss_pred HHcCCCEEEEechHhcCCCCCCCCCccccccCCceEEEecCCCEEEEEecHHHHHHHHHHHHHHhcCCCEEEEEeeeecC
Confidence 99999999999999998755666666677899999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhccCcEEEEeCCc-cccC
Q 021963 278 WDKETVEASVRKTGRLLPRSSGY-WRFW 304 (305)
Q Consensus 278 ~d~~~i~~~~~~~~~vvvvEe~~-~~~~ 304 (305)
||++.|++++++++++||||||+ .++|
T Consensus 241 ~d~~~i~~~~~~~~~vvvvEe~~~~Gg~ 268 (324)
T 1w85_B 241 LDIETIIGSVEKTGRAIVVQEAQRQAGI 268 (324)
T ss_dssp CCHHHHHHHHHHHSCEEEEEEEETTSSS
T ss_pred CCHHHHHHHHhhCCcEEEEeCCCcCChH
Confidence 99999999999999999999997 5777
No 2
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=100.00 E-value=2.8e-61 Score=450.96 Aligned_cols=265 Identities=53% Similarity=0.857 Sum_probs=245.5
Q ss_pred cccHHHHHHHHHHHHHhcCCCEEEEecccC-CCcccccchhhHhhhCCCcEEecchhHHHHHHHHHHHHhCCCeEEEEec
Q 021963 39 SLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQ 117 (305)
Q Consensus 39 ~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~-~g~~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~AaGlA~~G~~p~~~~~ 117 (305)
+++||++++++|.+++++|++|+++++|++ .++.++.++.|+++|||+||+|+||+|++|+++|+|+|++|+||+++++
T Consensus 3 ~~~~~~a~~~~l~~l~~~~~~vv~~~~D~~~~~g~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~a~G~A~~G~~p~~~~t 82 (324)
T 1umd_B 3 LMTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMAAHGLRPVAEIQ 82 (324)
T ss_dssp EECHHHHHHHHHHHHHHHCTTEEEEETTCSTTCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHHTCEEEEECS
T ss_pred CCcHHHHHHHHHHHHHhcCCCEEEECCcccccCCcchhhHHHHHHhCCCcEEECchhHHHHHHHHHHHHHCCCEEEEEec
Confidence 478999999999999999999999999998 4566666789999999999999999999999999999999999999867
Q ss_pred ccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCCCchHHHHHccCCCcEEEeeCCHHHHHHHHHHh
Q 021963 118 FADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSC 197 (305)
Q Consensus 118 ~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a 197 (305)
|++|++|++|||++++|+++|+++++.++ |+|++.+.|..+.+|+||+++|+++++++||++|++|+|++|++.+++++
T Consensus 83 ~~~F~~~a~dqi~~~~a~~~~~~~g~~~~-pvv~~~~~g~~~~~g~~hs~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a 161 (324)
T 1umd_B 83 FADYIFPGFDQLVSQVAKLRYRSGGQFTA-PLVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAA 161 (324)
T ss_dssp SGGGCGGGHHHHHHTTTTHHHHTTTSSCC-CCEEEEEECSSSSCGGGSSCCCHHHHHTSTTCEEEECCSHHHHHHHHHHH
T ss_pred cHhHHHHHHHHHHHHHHHHHhhcCCCCcC-CEEEEEcCCCCCCCCCccchhHHHHHhcCCCCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999998998888888 88887655666778999999999999999999999999999999999999
Q ss_pred HhCCCCEEEeccccccccCccCCCCCCCcccCCceEEeeeCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccC
Q 021963 198 IRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIP 277 (305)
Q Consensus 198 ~~~~~Pv~i~~~~~l~~~~~~~~~~~~~~~~~gk~~~~~~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P 277 (305)
+++++|++|++||+++|...+.++++++.+++||++++++|.|++|||+|++++.|++|++.|+++|++++|||+++++|
T Consensus 162 ~~~~~Pv~i~~p~~l~~~~~~~~~~~~~~~~~Gk~~~~~~g~dv~iva~G~~~~~a~~Aa~~L~~~Gi~v~vi~~~~l~P 241 (324)
T 1umd_B 162 IRDEDPVVFLEPKRLYRSVKEEVPEEDYTLPIGKAALRREGKDLTLICYGTVMPEVLQAAAELAKAGVSAEVLDLRTLMP 241 (324)
T ss_dssp HHCSSCEEEEEEGGGSSSCCEECCSSCCCCCTTCCEEEECCSSEEEEECGGGHHHHHHHHHHHHHTTCCEEEEECCEEET
T ss_pred HhcCCCEEEEechHhcCCCCCCcCCCCccccCCcceEEecCCCEEEEEecHHHHHHHHHHHHHHhcCCCEEEEEeceecC
Confidence 99999999999999998766667666677899999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhccCcEEEEeCCc-cccC
Q 021963 278 WDKETVEASVRKTGRLLPRSSGY-WRFW 304 (305)
Q Consensus 278 ~d~~~i~~~~~~~~~vvvvEe~~-~~~~ 304 (305)
||++.|++++++++++|++|||+ .++|
T Consensus 242 ~d~~~i~~~~~~~~~vv~vEe~~~~gG~ 269 (324)
T 1umd_B 242 WDYEAVMNSVAKTGRVVLVSDAPRHASF 269 (324)
T ss_dssp CCHHHHHHHHHHHSCEEEEEEEESTTCH
T ss_pred CCHHHHHHHHhcCCeEEEEecCCcCCCH
Confidence 99999999999999999999997 4555
No 3
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=100.00 E-value=9e-61 Score=450.46 Aligned_cols=268 Identities=65% Similarity=1.123 Sum_probs=241.2
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCEEEEecccCCCcccccchhhHhhhCCCcEEecchhHHHHHHHHHHHHhCCCeEEEEe
Q 021963 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEI 116 (305)
Q Consensus 37 ~~~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~g~~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~AaGlA~~G~~p~~~~ 116 (305)
+.+.+||++++++|.+++++|++++++++|++.+|.++.++.|+++|||+||+|+||+|++|+++|+|+|++|+||++++
T Consensus 18 ~~~~~~~~a~~~aL~~l~~~~~~vv~~~~D~~~~gt~~~~~~~~~~~gp~r~~~~gIaE~~~v~~a~G~A~~G~rp~~~~ 97 (342)
T 2bfd_B 18 TQKMNLFQSVTSALDNSLAKDPTAVIFGEDVAFGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEI 97 (342)
T ss_dssp EEEECHHHHHHHHHHHHHHHCTTCEEEETTTTTTCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCCccHHHHHHHHHHHHHhcCCCEEEEcCccCCCcccchHHHHHHHhCCCeEEEcCcCHHHHHHHHHHHHHCCCeeEEEe
Confidence 46689999999999999999999999999998656676789999999999999999999999999999999999999975
Q ss_pred cccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCCCchHHHHHccCCCcEEEeeCCHHHHHHHHHH
Q 021963 117 QFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLS 196 (305)
Q Consensus 117 ~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~ 196 (305)
||++|++|++|||++++|+++|+++++.+++|++++.+.|+.+++++||+++|++++|++|||+|++|+|++|++.++++
T Consensus 98 tf~~F~~~a~dqi~~~~a~~~~~~~g~~~~~pvv~~~~~~g~~~G~th~~~~d~~~l~~iP~l~V~~Psd~~e~~~~l~~ 177 (342)
T 2bfd_B 98 QFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLS 177 (342)
T ss_dssp SSGGGCGGGHHHHHTTGGGHHHHTTTSSCCTTEEEEEEESCCSSCGGGSSCCCHHHHHTSTTCEEECCSSHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhcCCccCCCEEEEEecCCCCCCcchhhHhHHHHHhcCCCcEEEeeCCHHHHHHHHHH
Confidence 79999999999999999999998888773223333332222345677888999999999999999999999999999999
Q ss_pred hHhCCCCEEEeccccccccCccCCCCCCCcccCCceEEeeeCCcEEEEEeChhHHHHHHHHHHHHhc-CCCeEEEEeccc
Q 021963 197 CIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKE-GISCELIDLKTL 275 (305)
Q Consensus 197 a~~~~~Pv~i~~~~~l~~~~~~~~~~~~~~~~~gk~~~~~~g~dv~Iia~G~~~~~aleAa~~L~~~-Gi~~~vI~~~~i 275 (305)
|+++++|++||+|++++|...+.++.+++.+++||++++++|.|++|||+|++++.|++|++.|+++ |++++|||++++
T Consensus 178 a~~~~~Pv~i~~p~~l~r~~~~~~~~~~~~~~~G~~~v~~~g~dv~iia~G~~~~~a~~Aa~~L~~~~Gi~v~vi~~~~l 257 (342)
T 2bfd_B 178 CIEDKNPCIFFEPKILYRAAAEEVPIEPYNIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAKEKLGVSCEVIDLRTI 257 (342)
T ss_dssp HHHSSSCEEEEEEGGGTTSCCEEEESSCCCCCSSCCEEEECCSSEEEEECTTHHHHHHHHHHHHHHHHCCCEEEEECCEE
T ss_pred HHhcCCcEEEEecchhcCCCCCCCCCcccceeCCceEEeccCCCEEEEEECHHHHHHHHHHHHHHhhcCCCEEEEeeeec
Confidence 9999999999999999988666666566778899999999999999999999999999999999999 999999999999
Q ss_pred cCCCHHHHHHHHhccCcEEEEeCCc-cccC
Q 021963 276 IPWDKETVEASVRKTGRLLPRSSGY-WRFW 304 (305)
Q Consensus 276 ~P~d~~~i~~~~~~~~~vvvvEe~~-~~~~ 304 (305)
+|||++.|++++++++++|+|||++ .++|
T Consensus 258 ~P~d~~~i~~~~~~~~~vv~vEe~~~~gg~ 287 (342)
T 2bfd_B 258 IPWDVDTICKSVIKTGRLLISHEAPLTGGF 287 (342)
T ss_dssp ESCCHHHHHHHHHHHSCEEEEEEEESTTCH
T ss_pred CCCCHHHHHHHHhcCCEEEEEEeCccCCcH
Confidence 9999999999999999999999995 5676
No 4
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=100.00 E-value=5.4e-60 Score=448.95 Aligned_cols=282 Identities=47% Similarity=0.709 Sum_probs=216.5
Q ss_pred ccchhhHHHHHhhcCC-CCC-C---CcccHHHHHHHHHHHHHhcCCCEEEEecccC-CCcccccchhhHhhhCCCcEEec
Q 021963 18 STACANKQLIQQHDGG-VGS-G---KSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNT 91 (305)
Q Consensus 18 ~~~~~~~~~~~~~~~~-~~~-~---~~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~-~g~~~~~~~~~~~~~gp~r~~~~ 91 (305)
.++.|...++ ..+|+ ... . .+.+||++++++|.+++++|++|+++++|++ .++.++.++.|+++|||+||+|+
T Consensus 25 ~~~~h~~~pf-~~~g~~~~~~~~~m~~~~~~~a~~~aL~~l~~~d~~vv~~~~D~~~~~g~~~~~~~~~~~~gp~r~~d~ 103 (369)
T 1ik6_A 25 FERNHMDSPD-LGTDDDDKMVAGVVMMANMAKAINMALHEEMERDERVVVLGEDVGKKGGVFLVTEGLYERFGPERVIDT 103 (369)
T ss_dssp --------------------CCSCEEEECHHHHHHHHHHHHHHHCTTEEEEEC---------CTTTTHHHHHCTTTEEEC
T ss_pred hhhhcccCCc-CCCCCcccccccccCcccHHHHHHHHHHHHHccCCCEEEECCcccccCCcchhHHHHHHHhCCCcEEEC
Confidence 3577778888 77776 322 1 5678999999999999999999999999997 45555567899999999999999
Q ss_pred chhHHHHHHHHHHHHhCCCeEEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCCCchHHH
Q 021963 92 PLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEA 171 (305)
Q Consensus 92 gIaE~~~v~~AaGlA~~G~~p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~hs~~d~a 171 (305)
||+|++|+++|+|+|+.|+||+++++|++|++|++|||++++|+++|+++++.++ |++++.+.+...++|+||++.|++
T Consensus 104 gIaE~~~v~~a~G~A~~G~rpv~~~tf~~Fl~~a~Dqi~~~~a~~~~~~~g~~~~-pvv~~~~~gg~~g~g~~hs~~~~a 182 (369)
T 1ik6_A 104 PLNEGGILGFAMGMAMAGLKPVAEIQFVDFIWLGADELLNHIAKLRYRSGGNYKA-PLVVRTPVGSGTRGGLYHSNSPEA 182 (369)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEEECCCC----CCHHHHHHHHHHHHC------CC-CCEEEEEECC-----------HHH
T ss_pred cccHHHHHHHHHHHHHCCCeeEEEecchhHHHHHHHHHHHHHHHHHHhhCCCCCC-CEEEEEeCCCCCCCCccccccHHH
Confidence 9999999999999999999999986799999999999999999999999987677 777665433333488999988899
Q ss_pred HHccCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEEeccccccccCccCCCCCCCcccCCceEEeeeCCcEEEEEeChhHH
Q 021963 172 FFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLS 251 (305)
Q Consensus 172 ~~~~iP~l~V~~P~d~~e~~~~l~~a~~~~~Pv~i~~~~~l~~~~~~~~~~~~~~~~~gk~~~~~~g~dv~Iia~G~~~~ 251 (305)
+|+++|||+|++|+|++|++.++++|++.++|++||+|++++|...+.++.+++.+++|+++++++|.|++|||+|+++.
T Consensus 183 ~l~~iPnl~V~~Psd~~e~~~ll~~A~~~~~Pv~i~~p~~l~r~~~~~v~~~~~~~~~G~~~v~~~g~dv~Iia~G~~v~ 262 (369)
T 1ik6_A 183 IFVHTPGLVVVMPSTPYNAKGLLKAAIRGDDPVVFLEPKILYRAPREEVPEGDYVVEIGKARVAREGDDVTLVTYGAVVH 262 (369)
T ss_dssp HHHTCTTCEEECCCSHHHHHHHHHHHHHSSSCEEEEEEGGGSSCCCEEEECSSCCCCTTCCEEEECCSSEEEEECTTHHH
T ss_pred HHcCCCCcEEEecCCHHHHHHHHHHHHhCCCCEEEEEehhhhccCCCCcCCCcccccCCceEEEEcCCCEEEEEeCHHHH
Confidence 99999999999999999999999999999999999999999987555565556778899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccCcEEEEeCCcc-ccC
Q 021963 252 IMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLPRSSGYW-RFW 304 (305)
Q Consensus 252 ~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvEe~~~-~~~ 304 (305)
.|++|++.|+ | +++|||+++++|||++.|++++++++++|++||+.. ++|
T Consensus 263 ~a~~Aa~~L~--G-~v~Vi~~~~l~P~d~~~i~~~~~~~~~vvvvEe~~~~GG~ 313 (369)
T 1ik6_A 263 KALEAAERVK--A-SVEVVDLQTLNPLDFDTVLKSVSKTGRLIIAHDSPKTGGL 313 (369)
T ss_dssp HHHHHHHTSS--S-CEEEEECCEEETTCHHHHHHHHHHHCCEEEEEEEESTTSH
T ss_pred HHHHHHHHhC--C-CeEEEeeeecCCCCHHHHHHHHhccCeEEEEecCCcCCcH
Confidence 9999999996 8 999999999999999999999999999999999974 666
No 5
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=100.00 E-value=7.1e-59 Score=437.02 Aligned_cols=262 Identities=45% Similarity=0.807 Sum_probs=238.9
Q ss_pred cccHHHHHHHHHHHHHhcCCCEEEEecccC-CCcccccchhhHhhhCCCcEEecchhHHHHHHHHHHHHhCCCeEEEEec
Q 021963 39 SLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQ 117 (305)
Q Consensus 39 ~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~-~g~~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~AaGlA~~G~~p~~~~~ 117 (305)
+.+||++++++|.+++++|++++++++|++ .++.++.++.|+++|||+||+|+||+|++|+++|+|+|++|+||++++|
T Consensus 4 ~~~~~~a~~~~l~~l~~~~~~vv~~~~D~~~~~g~~~~~~~~~~~~gp~r~~~~gisE~~~~~~a~G~A~~G~rp~~~~t 83 (338)
T 1qs0_B 4 TMTMIQALRSAMDVMLERDDNVVVYGQDVGYFGGVFRCTEGLQTKYGKSRVFDAPISESGIVGTAVGMGAYGLRPVVEIQ 83 (338)
T ss_dssp ECCHHHHHHHHHHHHHHHCTTEEEEETTCSSSCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHHTCEEEEECS
T ss_pred cchHHHHHHHHHHHHHhhCCCEEEECCcccccCCcchhHHHHHHHhCCCcEEEccccHHHHHHHHHHHHhCCCEEEEEec
Confidence 478999999999999999999999999998 5666667899999999999999999999999999999999999999757
Q ss_pred ccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCCCchHHHHHccCCCcEEEeeCCHHHHHHHHHHh
Q 021963 118 FADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSC 197 (305)
Q Consensus 118 ~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a 197 (305)
|++|++|++|||++++|+++|+++++.++ |++++.+.|....+++||+++|++++|++|||+|++|+|++|+++++++|
T Consensus 84 ~~~F~~~a~dqi~~~~a~~~~~~~~~~~~-pvv~~~~~~g~~~G~th~s~~d~~~l~~iP~l~V~~Psd~~e~~~~l~~A 162 (338)
T 1qs0_B 84 FADYFYPASDQIVSEMARLRYRSAGEFIA-PLTLRMPCGGGIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIAS 162 (338)
T ss_dssp CGGGCGGGHHHHHTTTTTHHHHTTTSSCC-CCEEEEEECCSSSCCSSSSCCCHHHHTTSTTCEEECCCSHHHHHHHHHHH
T ss_pred cHhHHHHHHHHHHHHHHHHhhhcCCCCCC-CEEEEEeCCCCCCCcccccccHHHHHhcCCCCEEEeeCCHHHHHHHHHHH
Confidence 99999999999999999999999987777 88877654444556778889999999999999999999999999999999
Q ss_pred HhCCCCEEEeccccccccCcc----------------CCCCCCCcccCCceEEeeeCCcEEEEEeChhHHHHHHHHHHHH
Q 021963 198 IRDPNPVVFFEPKWLYRLSVE----------------EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAE 261 (305)
Q Consensus 198 ~~~~~Pv~i~~~~~l~~~~~~----------------~~~~~~~~~~~gk~~~~~~g~dv~Iia~G~~~~~aleAa~~L~ 261 (305)
+++++|++|++|++++|...+ .++.+++.+++||++++++|.|++|||+|++++.|++|++.
T Consensus 163 ~~~~~Pv~i~~p~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~~~~~~g~dv~iva~G~~~~~a~~Aa~~-- 240 (338)
T 1qs0_B 163 IECDDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPHSAVPDGYYTVPLDKAAITRPGNDVSVLTYGTTVYVAQVAAEE-- 240 (338)
T ss_dssp HHSSSCEEEEEEGGGSSSCCCSCSSSCCCCSTTSTTCEEESSCCCCCTTCCCEEECCSSCEEEECTTHHHHHHHHHHH--
T ss_pred HhcCCcEEEEEchHhhcCcccccccCccchhhcccccccCCCCcccccCceeEecCCCCEEEEEeCHHHHHHHHHHHH--
Confidence 999999999999999987655 45555567889999999999999999999999999999997
Q ss_pred hcCCCeEEEEeccccCCCHHHHHHHHhccCcEEEEeCCc-cccC
Q 021963 262 KEGISCELIDLKTLIPWDKETVEASVRKTGRLLPRSSGY-WRFW 304 (305)
Q Consensus 262 ~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvEe~~-~~~~ 304 (305)
+|++++|||+++++|||++.|++++++++++|||||+. .++|
T Consensus 241 -~Gi~v~vi~~~~l~P~d~~~i~~~~~~~~~vvvvEe~~~~gG~ 283 (338)
T 1qs0_B 241 -SGVDAEVIDLRSLWPLDLDTIVESVKKTGRCVVVHEATRTCGF 283 (338)
T ss_dssp -HCCCCEEEECSEEESCCHHHHHHHHHHHSCEEEEESSCSTTST
T ss_pred -cCCCEEEEeecccCCCCHHHHHHHHhcCCEEEEEecCCcCCcH
Confidence 69999999999999999999999999999999999997 5666
No 6
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=100.00 E-value=1.1e-58 Score=436.05 Aligned_cols=267 Identities=36% Similarity=0.607 Sum_probs=240.1
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCEEEEecccC-CCcccccchhhHhhhCCCcEEecchhHHHHHHHHHHHHhCCCeEEEE
Q 021963 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAE 115 (305)
Q Consensus 37 ~~~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~-~g~~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~AaGlA~~G~~p~~~ 115 (305)
..+++|+++++++|.+++++|++|+++++|++ .|+.++.++.|.++|||+||+|+||+|++|+++|+|+|++|+||+++
T Consensus 12 ~~~~~~~~a~~~~L~~l~~~~~~vv~~~~D~~~~g~~~~~~~~~~~~~gp~r~~d~gIaE~~~v~~a~G~A~~G~rp~~~ 91 (341)
T 2ozl_B 12 SLQVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICE 91 (341)
T ss_dssp CCEEEHHHHHHHHHHHHHHHCTTEEEEETTSSTTCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cccccHHHHHHHHHHHHHhhCCCEEEECCcccccCCcchhHHHHHHHhCCCcEEECchhHHHHHHHHHHHHHCCCEEEEE
Confidence 46789999999999999999999999999998 35555567899999999999999999999999999999999999998
Q ss_pred ecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCCCchHHHHHccCCCcEEEeeCCHHHHHHHHH
Q 021963 116 IQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLL 195 (305)
Q Consensus 116 ~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~ 195 (305)
++|++|++|++|||++++|+++|++++..++ |++++.++|..+++|++|++...++++++|||+|++|+|++|++.+++
T Consensus 92 ~~f~~F~~~a~dqi~~~~a~~~y~~~g~~~~-pvv~~~~~G~~g~~G~tHs~~~ea~l~~iP~l~V~~Psd~~e~~~~l~ 170 (341)
T 2ozl_B 92 FMTFNFSMQAIDQVINSAAKTYYMSGGLQPV-PIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIK 170 (341)
T ss_dssp CSSGGGGGGGHHHHHTTTTTHHHHTTSSCCC-CCEEEEECSCCSSCCGGGCCCCHHHHHTSTTCEEECCCSHHHHHHHHH
T ss_pred eccHHHHHHHHHHHHHHHHHHHhhccccCCC-CEEEEEcCcCCCCCCcchhhHHHHHhccCCCCEEEEeCCHHHHHHHHH
Confidence 6799999999999999999999999887777 778776666677788888543239999999999999999999999999
Q ss_pred HhHhCCCCEEEeccccccccC--c-cCCCCCCCcccCCceEEeeeCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEe
Q 021963 196 SCIRDPNPVVFFEPKWLYRLS--V-EEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (305)
Q Consensus 196 ~a~~~~~Pv~i~~~~~l~~~~--~-~~~~~~~~~~~~gk~~~~~~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~ 272 (305)
+|+++++|++||+||.+++.. . +.++++++.+++||++++++|.|++|||+|+++..|++|++.|+++|++++|||+
T Consensus 171 ~a~~~~~Pv~i~~~~~~~~~~~~v~p~~~~~~~~~~~Gk~~v~~~g~dv~iia~Gs~~~~a~~Aa~~L~~~Gi~v~vv~~ 250 (341)
T 2ozl_B 171 SAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINM 250 (341)
T ss_dssp HHHHSSSCEEEEECHHHHTCEEECCHHHHSTTCCCCTTCCEEEECCSSEEEEECSTHHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred HHHhcCCCEEEEEChhhhcCCCCcCCccCCccccccCCceEEeccCCCEEEEEeCHHHHHHHHHHHHHHhcCCCeEEEee
Confidence 999999999999999876532 2 2234456778899999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHhccCcEEEEeCCcc-ccC
Q 021963 273 KTLIPWDKETVEASVRKTGRLLPRSSGYW-RFW 304 (305)
Q Consensus 273 ~~i~P~d~~~i~~~~~~~~~vvvvEe~~~-~~~ 304 (305)
++++|||++.|++++++++++|+||||+. ++|
T Consensus 251 ~~l~P~d~~~i~~~~~~~~~vv~vEe~~~~Gg~ 283 (341)
T 2ozl_B 251 RTIRPMDMETIEASVMKTNHLVTVEGGWPQFGV 283 (341)
T ss_dssp CEEETCCHHHHHHHHHHHSCEEEECSSCSTTCH
T ss_pred eeecCCCHHHHHHHHhcCCeEEEEecCcccCcH
Confidence 99999999999999999999999999985 776
No 7
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=100.00 E-value=3.6e-51 Score=411.18 Aligned_cols=249 Identities=22% Similarity=0.247 Sum_probs=219.3
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCEEEEecccCCCcccccchhhHhhhCCCcEEecchhHHHHHHHHHHHHhCCC-eEEEE
Q 021963 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGN-RAIAE 115 (305)
Q Consensus 37 ~~~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~g~~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~AaGlA~~G~-~p~~~ 115 (305)
+.++++|++++++|.+++++|++++++++|++.++ .++.|+++| |+||||+||+|++|+++|+|+|+.|. +|++.
T Consensus 310 ~~~~a~r~a~~~~L~~l~~~d~~vv~~~aD~~~~~---~~~~~~~~~-p~R~~d~gIaE~~~v~~a~G~A~~G~~~~~~~ 385 (616)
T 3mos_A 310 GDKIATRKAYGQALAKLGHASDRIIALDGDTKNST---FSEIFKKEH-PDRFIECYIAEQNMVSIAVGCATRNRTVPFCS 385 (616)
T ss_dssp TCBCCHHHHHHHHHHHHHHHCTTEEEEESSCHHHH---SHHHHHHHC-GGGEEECCSCHHHHHHHHHHHHGGGCCEEEEE
T ss_pred ccchHHHHHHHHHHHHHHhhCCCEEEEeCCcCCCc---chhhHHHhC-CCCeEEcCccHHHHHHHHHHHHHcCCCCEEEE
Confidence 45688999999999999999999999999998432 368999999 99999999999999999999999997 78888
Q ss_pred ecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCC-CCchHHHHHccCCCcEEEeeCCHHHHHHHH
Q 021963 116 IQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHY-HSQSPEAFFCHVPGLKVVIPRSPRQAKGLL 194 (305)
Q Consensus 116 ~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~-hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l 194 (305)
+|++|++|++|||+++ ++++ +++ .+++.+++...|.+|++ |+++|+++|+++|||+|++|+|++|++.++
T Consensus 386 -~f~~Fl~~a~dqi~~~-a~~~------~~v-~~v~~~~g~~~G~dG~tH~~~ed~a~l~~iP~l~V~~P~d~~e~~~~l 456 (616)
T 3mos_A 386 -TFAAFFTRAFDQIRMA-AISE------SNI-NLCGSHCGVSIGEDGPSQMALEDLAMFRSVPTSTVFYPSDGVATEKAV 456 (616)
T ss_dssp -EEGGGGGGGHHHHHHH-HHTT------CCE-EEEEESBSGGGCTTCGGGCBSSHHHHHHTSTTEEEECCCSHHHHHHHH
T ss_pred -ehHHHHHHHHHHHHHH-HHhC------CCe-EEEEECCCccccCCCCcccCHHHHHHhcCCCCCEEEecCCHHHHHHHH
Confidence 5999999999999985 6665 466 66654444446766654 579999999999999999999999999999
Q ss_pred HHhHhCCCCEEEeccccccccCccCCCCCCCcccCCceEEeeeCCc--EEEEEeChhHHHHHHHHHHHHhcCCCeEEEEe
Q 021963 195 LSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSD--ITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (305)
Q Consensus 195 ~~a~~~~~Pv~i~~~~~l~~~~~~~~~~~~~~~~~gk~~~~~~g~d--v~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~ 272 (305)
+++++.++|+++|.+| ...+.++..++.+++||++++++|+| ++|||+|++++.|++|+++|+++||+++|||+
T Consensus 457 ~~a~~~~gp~~ir~~r----~~~p~~~~~~~~~~~Gka~vl~eg~d~dv~iva~G~~v~~al~Aa~~L~~~Gi~v~Vidl 532 (616)
T 3mos_A 457 ELAANTKGICFIRTSR----PENAIIYNNNEDFQVGQAKVVLKSKDDQVTVIGAGVTLHEALAAAELLKKEKINIRVLDP 532 (616)
T ss_dssp HHHHTCCSEEEEECCS----SCCBCCSCTTCCCCTTCCEEEECCSSEEEEEECCTHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHhcCCCEEEEEeC----CCCCccCCCcccccCCeEEEEEeCCCCCEEEEEeCHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 9999999999996654 44455555556788999999999876 99999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHhcc-CcEEEEeCCccc
Q 021963 273 KTLIPWDKETVEASVRKT-GRLLPRSSGYWR 302 (305)
Q Consensus 273 ~~i~P~d~~~i~~~~~~~-~~vvvvEe~~~~ 302 (305)
+++||||+++|.++++++ ++|||||||+..
T Consensus 533 r~l~PlD~e~i~~~~~~~~~~vvvvEe~~~~ 563 (616)
T 3mos_A 533 FTIKPLDRKLILDSARATKGRILTVEDHYYE 563 (616)
T ss_dssp SEEESCCHHHHHHHHHHTTTEEEEEEEEEST
T ss_pred CccCCCCHHHHHHHHHhcCCEEEEEcCCCCC
Confidence 999999999999999999 999999999763
No 8
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=100.00 E-value=6e-49 Score=396.65 Aligned_cols=243 Identities=21% Similarity=0.323 Sum_probs=215.7
Q ss_pred cccHHHHHHHHHHHHHhcCCCEEEEecccCCCcccccchhhHhhhCCCcEEecchhHHHHHHHHHHHHhCCCeEEEEecc
Q 021963 39 SLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQF 118 (305)
Q Consensus 39 ~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~g~~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~AaGlA~~G~~p~~~~~~ 118 (305)
..+|+++|+++|.+++++|++++++++|+..| + .+..|+++| |+||+|+||+|++|+++|+|+|++|+|||+++ |
T Consensus 321 ~~~~~~~~~~~l~~~~~~d~~v~~i~~d~~~~--~-~~~~f~~~~-~~r~~~~gIaE~~~~~~a~G~A~~G~rp~~~~-~ 395 (629)
T 2o1x_A 321 AYSWSAAFGEAVTEWAKTDPRTFVVTPAMREG--S-GLVEFSRVH-PHRYLDVGIAEEVAVTTAAGMALQGMRPVVAI-Y 395 (629)
T ss_dssp CCBHHHHHHHHHHHHHHHCTTEEEEESSCTTT--T-TCHHHHHHC-GGGEEECCSCHHHHHHHHHHHHHTTCEEEEEE-E
T ss_pred hHHHHHHHHHHHHHHhhhCcCEEEEeccccCC--c-ChHHHHHhc-CcceEeccccHHHHHHHHHHHHHcCCEEEEEe-c
Confidence 57899999999999999999999999999743 2 368999999 99999999999999999999999999999996 9
Q ss_pred cchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCC-CchHHHHHccCCCcEEEeeCCHHHHHHHHHHh
Q 021963 119 ADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-SQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSC 197 (305)
Q Consensus 119 ~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~h-s~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a 197 (305)
++|++||+|||++++|+++ +|+ .+++. .+|.++.+|++| +.+|++++|++||++|++|+|++|++.++++|
T Consensus 396 ~~F~~~a~dqi~~~~a~~~------~pv-v~~~~-~~g~~g~dG~tH~~~~d~a~~r~iP~l~v~~P~d~~e~~~~~~~a 467 (629)
T 2o1x_A 396 STFLQRAYDQVLHDVAIEH------LNV-TFCID-RAGIVGADGATHNGVFDLSFLRSIPGVRIGLPKDAAELRGMLKYA 467 (629)
T ss_dssp HHHHGGGHHHHHHTTTTTT------CCC-EEEEE-SBBCCCTTCTTTCBCSHHHHTTTSTTCEEECCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcC------CCE-EEEEE-CCccCCCCCcccCccHHHHHHHccCCcEEEecCCHHHHHHHHHHH
Confidence 9999999999999999876 455 55443 344466666666 47999999999999999999999999999999
Q ss_pred HhCCCCEEEeccccccccCccCCC-CCCCcccCCceEEeeeCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEecccc
Q 021963 198 IRDPNPVVFFEPKWLYRLSVEEVP-EDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLI 276 (305)
Q Consensus 198 ~~~~~Pv~i~~~~~l~~~~~~~~~-~~~~~~~~gk~~~~~~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~ 276 (305)
++.++|++||++|... +.++ ++.+.+++||++++++|.|++||++|+++..|++|++.|+ +++|||++|++
T Consensus 468 ~~~~~Pv~i~~~r~~~----~~~~~~~~~~~~~G~~~~~~~g~dv~iva~G~~v~~a~~Aa~~L~----~~~Vi~~~~~~ 539 (629)
T 2o1x_A 468 QTHDGPFAIRYPRGNT----AQVPAGTWPDLKWGEWERLKGGDDVVILAGGKALDYALKAAEDLP----GVGVVNARFVK 539 (629)
T ss_dssp HHSSSCEEEECCSSBC----CCCCTTCCCCCCTTCCEEEECCSSEEEEECHHHHHHHHHHHTTCT----TEEEEECCEEE
T ss_pred HhCCCCEEEEecCCCC----CCCcccccccccCCceEEEeeCCCEEEEEecHHHHHHHHHHHHhc----CCEEEeeCCCC
Confidence 9999999998887543 2222 2345688999999999999999999999999999999996 89999999999
Q ss_pred CCCHHHHHHHHhccCcEEEEeCCccc
Q 021963 277 PWDKETVEASVRKTGRLLPRSSGYWR 302 (305)
Q Consensus 277 P~d~~~i~~~~~~~~~vvvvEe~~~~ 302 (305)
|||++.|.+++++++++|||||++..
T Consensus 540 Pld~~~i~~~~~~~~~vv~vEe~~~~ 565 (629)
T 2o1x_A 540 PLDEEMLREVGGRARALITVEDNTVV 565 (629)
T ss_dssp SCCHHHHHHHHHHCSEEEEEEEEESS
T ss_pred CCcHHHHHHHHhhCCcEEEEecCCCC
Confidence 99999999999999999999999873
No 9
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=100.00 E-value=2.3e-49 Score=398.05 Aligned_cols=250 Identities=12% Similarity=0.125 Sum_probs=211.6
Q ss_pred CcccHHHHHHHHHHHHHhcCCCEEEEecccCCCcccccchhhHhhhCCCcEEecchhHHHHHHHHHHHHhC-CCeEEEEe
Q 021963 38 KSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEI 116 (305)
Q Consensus 38 ~~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~g~~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~~ 116 (305)
.++.+|++++++|.++++.+|+++++++|++.++. ..-.+.++|||+||||+||+||+|+++|+|||+. |+|||+++
T Consensus 336 ~~~a~r~a~~~~l~~l~~~~p~~v~~~aDl~~s~~--~~~~~~~~f~p~R~~d~GIaE~~~v~~a~GlA~~gG~~P~~~~ 413 (632)
T 3l84_A 336 KDLATRDSNGEILNVLAKNLEGFLGGSADLGPSNK--TELHSMGDFVEGKNIHFGIREHAMAAINNAFARYGIFLPFSAT 413 (632)
T ss_dssp CCBCHHHHHHHHHHHHHHHCTTEEEEESSCHHHHT--CCCTTSCBTTTSSEEECCSCHHHHHHHHHHHHHHSSCEEEEEE
T ss_pred cchHHHHHHHHHHHHHHhhCCCEEEEecccCCccC--cchhcccccCCCCeEEeCccHHHHHHHHHHHHHcCCCEEEEEe
Confidence 56889999999999999999999999999973221 1112336788999999999999999999999999 99999995
Q ss_pred cccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCC-CchHHHHHccCCCcEEEeeCCHHHHHHHHH
Q 021963 117 QFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-SQSPEAFFCHVPGLKVVIPRSPRQAKGLLL 195 (305)
Q Consensus 117 ~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~h-s~~d~a~~~~iP~l~V~~P~d~~e~~~~l~ 195 (305)
|++|+.|+++|||+ +|+++ +|+ .+++++.+..+|.+|++| +++|+++||++|||+|++|+|+.|++.+++
T Consensus 414 -f~~F~~~~~~~ir~-~a~~~------~pv-~~~~t~~g~g~G~dG~THq~~ed~a~lr~iP~l~V~~P~d~~e~~~~l~ 484 (632)
T 3l84_A 414 -FFIFSEYLKPAARI-AALMK------IKH-FFIFTHDSIGVGEDGPTHQPIEQLSTFRAMPNFLTFRPADGVENVKAWQ 484 (632)
T ss_dssp -EGGGHHHHHHHHHH-HHHHT------CCC-EEEEECCSGGGCTTCGGGSCSSHHHHHHHSSSCEEECCSSHHHHHHHHH
T ss_pred -cHHHHHHHHHHHHH-HhccC------CCE-EEEEECCCcCCCCCCCCCCCHhHHHHHhcCCCCEEEecCCHHHHHHHHH
Confidence 99999999999984 78776 566 666556555577666555 799999999999999999999999999999
Q ss_pred HhHhCCCCEEEeccccccccCccCCCCC-CCcccCCce-EEeee--CCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEE
Q 021963 196 SCIRDPNPVVFFEPKWLYRLSVEEVPED-DYMLPLSEA-EVIRE--GSDITLVGWGAQLSIMEQACLDAEKEGISCELID 271 (305)
Q Consensus 196 ~a~~~~~Pv~i~~~~~l~~~~~~~~~~~-~~~~~~gk~-~~~~~--g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~ 271 (305)
+|++.++|+|||++|. .. ++.+ .+..++++. +++++ |+|++||++|++++.|++|++.|+++||+++|||
T Consensus 485 ~A~~~~~Pv~ir~~r~----~~--~~~~~~~~~~~~~g~~vl~~~~g~dvtiia~G~~v~~al~Aa~~L~~~Gi~~~Vi~ 558 (632)
T 3l84_A 485 IALNADIPSAFVLSRQ----KL--KALNEPVFGDVKNGAYLLKESKEAKFTLLASGSEVWLCLESANELEKQGFACNVVS 558 (632)
T ss_dssp HHHHCSSCEEEECCSS----CB--CCCCCCSBCCGGGSSEEEECCTTCSEEEEECGGGHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHhCCCCEEEEEcCC----CC--CCCccccccccccccEEEEecCCCCEEEEEechHHHHHHHHHHHHHhcCCCeEEEe
Confidence 9999999999977753 22 2222 233455654 78888 8999999999999999999999999999999999
Q ss_pred eccccCCCHHH--HHHHHhccCcEEEEeCCccccCC
Q 021963 272 LKTLIPWDKET--VEASVRKTGRLLPRSSGYWRFWC 305 (305)
Q Consensus 272 ~~~i~P~d~~~--i~~~~~~~~~vvvvEe~~~~~~~ 305 (305)
++|++|||+++ +++++.+ ++||+||++...+|.
T Consensus 559 ~~~i~PlD~~~~~~~~sv~~-~~vv~vE~~~~~g~~ 593 (632)
T 3l84_A 559 MPCFELFEKQDKAYQERLLK-GEVIGVEAAHSNELY 593 (632)
T ss_dssp CSBHHHHHTSCHHHHHHHCC-SEEEEECSSCCGGGG
T ss_pred cCcCCCcchhHHHHHHHhcC-CCEEEEeCChhhhHH
Confidence 99999999975 6777777 789999999998884
No 10
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.9e-48 Score=392.59 Aligned_cols=244 Identities=18% Similarity=0.298 Sum_probs=213.6
Q ss_pred CcccHHHHHHHHHHHHHhcCCCEEEEecccCCCcccccchhhHhhhCCCcEEecchhHHHHHHHHHHHHhCCCeEEEEec
Q 021963 38 KSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQ 117 (305)
Q Consensus 38 ~~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~g~~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~AaGlA~~G~~p~~~~~ 117 (305)
...+|+++|+++|.+++++|++++++++|+..+ + .+..|+++| |+||+|+||+|++|+++|+|+|++|+|||+++
T Consensus 317 ~~~~~~~~~~~~l~~~~~~d~~v~~~~~d~~~~--~-~~~~~~~~~-~~r~~~~gIaE~~~~~~a~G~A~~G~rp~~~~- 391 (621)
T 2o1s_A 317 GLPSYSKIFGDWLCETAAKDNKLMAITPAMREG--S-GMVEFSRKF-PDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAI- 391 (621)
T ss_dssp -CCBHHHHHHHHHHHHHHHCTTEEEEESSCTTT--T-TCHHHHHHC-TTTEEECCSCHHHHHHHHHHHHHTTCEEEEEE-
T ss_pred chHHHHHHHHHHHHHHHhhCcCEEEEeCcccCC--c-ChHHHHHhC-CCceEecCcCHHHHHHHHHHHHHCCCEEEEEe-
Confidence 457899999999999999999999999999743 2 368999999 99999999999999999999999999999996
Q ss_pred ccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCCC-chHHHHHccCCCcEEEeeCCHHHHHHHHHH
Q 021963 118 FADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHS-QSPEAFFCHVPGLKVVIPRSPRQAKGLLLS 196 (305)
Q Consensus 118 ~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~hs-~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~ 196 (305)
|++|++|++||+++++|+++ +|+ .+++. .+|..+.+|++|+ .+|++++|++||++|++|+|++|++.++++
T Consensus 392 ~~~F~~~a~dqi~~~~a~~~------~pv-v~~~~-~~g~~g~~G~tH~~~~d~~~~~~iP~l~v~~P~d~~e~~~~l~~ 463 (621)
T 2o1s_A 392 YSTFLQRAYDQVLHDVAIQK------LPV-LFAID-RAGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYT 463 (621)
T ss_dssp ETTGGGGGHHHHHHTTTTTT------CCC-EEEEE-SCBCCCTTCGGGCBCSHHHHTTTSTTCEEECCSSHHHHHHHHHH
T ss_pred hHhHHHHHHHHHHHHHHhcC------CCE-EEEEE-CCccCCCCCCccCchHHHHHHhcCCCCEEEecCCHHHHHHHHHH
Confidence 99999999999999999876 455 44443 3444666666665 799999999999999999999999999999
Q ss_pred hHhC-CCCEEEeccccccccCccCCCCCCCcccCCceEEeeeCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccc
Q 021963 197 CIRD-PNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTL 275 (305)
Q Consensus 197 a~~~-~~Pv~i~~~~~l~~~~~~~~~~~~~~~~~gk~~~~~~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i 275 (305)
|++. ++|++||++|..... .+.++. +.+++||++++++|.|++|||+|++++.|++| ++|++++|||++|+
T Consensus 464 a~~~~~~Pv~i~~~r~~~~~--~~~~~~-~~~~~G~~~~~~~g~dv~iva~G~~~~~a~~A-----~~Gi~v~Vi~~~~~ 535 (621)
T 2o1s_A 464 GYHYNDGPSAVRYPRGNAVG--VELTPL-EKLPIGKGIVKRRGEKLAILNFGTLMPEAAKV-----AESLNATLVDMRFV 535 (621)
T ss_dssp HHHCCSSCEEEECCSSBCCC--CCCCCC-CCCCTTCCEEEECCSSEEEEEESTTHHHHHHH-----HHHHTCEEEECCEE
T ss_pred HHHcCCCCEEEEeCCCCCCC--CCCCcc-ccccCCceEEeecCCCEEEEEecHHHHHHHHH-----cCCCCEEEEecCcc
Confidence 9998 999999988764321 112222 67889999999999999999999999999999 45999999999999
Q ss_pred cCCCHHHHHHHHhccCcEEEEeCCccc
Q 021963 276 IPWDKETVEASVRKTGRLLPRSSGYWR 302 (305)
Q Consensus 276 ~P~d~~~i~~~~~~~~~vvvvEe~~~~ 302 (305)
+|||++.|.+++++++++|||||+...
T Consensus 536 ~P~d~~~i~~~~~~~~~vv~vEe~~~~ 562 (621)
T 2o1s_A 536 KPLDEALILEMAASHEALVTVEENAIM 562 (621)
T ss_dssp ESCCHHHHHHHHHHCSEEEEEEEEEST
T ss_pred CCCCHHHHHHHHccCCeEEEEECCCCC
Confidence 999999999999999999999999763
No 11
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=100.00 E-value=7.2e-49 Score=397.50 Aligned_cols=255 Identities=13% Similarity=0.128 Sum_probs=213.3
Q ss_pred CCCcccHHHHHHHHHHHHHhcCCCEEEEecccCC--CcccccchhhHhhhCCCcEEecchhHHHHHHHHHHHHhC-CCeE
Q 021963 36 SGKSLNLYSAINQALHIALETDPRAYVFGEDVGF--GGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRA 112 (305)
Q Consensus 36 ~~~~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~--g~~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~AaGlA~~-G~~p 112 (305)
+++++++|++++++|.++++++|+++++++|++. ++.++.++.|.++|+|+||||+||+||+|+++|+|||+. |+||
T Consensus 375 ~~~~~a~R~a~g~~L~~~~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~~~~~R~~d~GIaE~~mv~~A~GlA~~gG~~P 454 (690)
T 3m49_A 375 LGSKAATRNSSGAVINAIAESVPSFFGGSADLAGSNKTYMNNEKDFTRDDYSGKNIWYGVREFAMGAAMNGIALHGGLKT 454 (690)
T ss_dssp TTCEEEHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCCCTTSCBCBTTBTTCCEEECCSCHHHHHHHHHHHHHHSSCEE
T ss_pred cccchHHHHHHHHHHHHHHhhCCCEEEEeCcccccCCccccccccchhhcCCCceEEcCchHHHHHHHHHHHHHcCCCEE
Confidence 3467899999999999999999999999999972 222345678988887999999999999999999999998 9999
Q ss_pred EEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCC-CchHHHHHccCCCcEEEeeCCHHHHH
Q 021963 113 IAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-SQSPEAFFCHVPGLKVVIPRSPRQAK 191 (305)
Q Consensus 113 ~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~h-s~~d~a~~~~iP~l~V~~P~d~~e~~ 191 (305)
|+++ |..|+..+..||| ++|+++ +|+ .+++.+.+..+|.+|++| +++|+++||++|||+|++|+|+.|++
T Consensus 455 ~~~t-f~~Fs~f~~~air-~~al~~------lpV-v~v~~~~gigvG~dG~THq~ied~a~lr~iPnl~V~~Pad~~E~~ 525 (690)
T 3m49_A 455 YGGT-FFVFSDYLRPAIR-LAALMQ------LPV-TYVFTHDSIAVGEDGPTHEPIEQLAALRAMPNVSVIRPADGNESV 525 (690)
T ss_dssp EEEE-EGGGGGGGHHHHH-HHHHHT------CCC-EEEEECCSGGGCTTCGGGCCSSHHHHHHTSTTCEEECCSSHHHHH
T ss_pred EEEe-cHHHHHHHHHHHH-HHHhcC------CCc-EEEEECCCcCCCCCCCccCCHHHHHHHhcCCCCEEEeeCCHHHHH
Confidence 9994 8777755556787 478877 566 666655555467666655 69999999999999999999999999
Q ss_pred HHHHHhHhC-CCCEEEeccccccccCccCCCCCC----CcccCCceEEeeeCC----cEEEEEeChhHHHHHHHHHHHHh
Q 021963 192 GLLLSCIRD-PNPVVFFEPKWLYRLSVEEVPEDD----YMLPLSEAEVIREGS----DITLVGWGAQLSIMEQACLDAEK 262 (305)
Q Consensus 192 ~~l~~a~~~-~~Pv~i~~~~~l~~~~~~~~~~~~----~~~~~gk~~~~~~g~----dv~Iia~G~~~~~aleAa~~L~~ 262 (305)
.++++|++. ++|++||++| ...+.++.++ +.+++|+ +++++|+ |++|||+|++++.|++|++.|++
T Consensus 526 ~~l~~Ai~~~~~Pv~ir~~R----~~~p~~~~~~~~~~~~~~~G~-~vlr~g~~g~~dvtiia~G~~v~~Al~Aa~~L~~ 600 (690)
T 3m49_A 526 AAWRLALESTNKPTALVLTR----QDLPTLEGAKDDTYEKVAKGA-YVVSASKKETADVILLATGSEVSLAVEAQKALAV 600 (690)
T ss_dssp HHHHHHHHCSSSCEEEECCS----SEEECCHHHHTTHHHHHHTSC-EEEECCSSSSCSEEEEECTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEEeec----ccCCCCCccccccccccCCCe-EEEEecCCCCCCEEEEEechHHHHHHHHHHHHHh
Confidence 999999998 7999997765 3334332222 4677887 6888885 99999999999999999999999
Q ss_pred cCCCeEEEEeccccCCCH--HHHHHHHh--ccCcEEEEeCCccccC
Q 021963 263 EGISCELIDLKTLIPWDK--ETVEASVR--KTGRLLPRSSGYWRFW 304 (305)
Q Consensus 263 ~Gi~~~vI~~~~i~P~d~--~~i~~~~~--~~~~vvvvEe~~~~~~ 304 (305)
+||+++|||++|++|||. +++++++. +++++|+||++...+|
T Consensus 601 ~GI~~~Vid~~~i~p~D~~d~~~~~~v~~~~~~~~v~vEe~~~~G~ 646 (690)
T 3m49_A 601 DGVDASVVSMPSMDRFEAQTAEYKESVLPKAVTKRFAIEMGATFGW 646 (690)
T ss_dssp TTCCEEEEECSCHHHHHTSCHHHHHHHSCTTCCCEEEECSSCCTTT
T ss_pred cCCCeEEEecccCCcCccccHHHHHHHhhccCCeEEEEECCchhhH
Confidence 999999999999999986 45656554 5789999999999888
No 12
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=100.00 E-value=1.4e-48 Score=396.19 Aligned_cols=254 Identities=16% Similarity=0.192 Sum_probs=216.4
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCEEEEecccCC-Ccc-cccchhhHhh---hCC---CcEEecchhHHHHHHHHHHHHhC
Q 021963 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVGF-GGV-FRCTTGLADR---FGK---SRVFNTPLCEQGIVGFAIGLAAM 108 (305)
Q Consensus 37 ~~~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~-g~~-~~~~~~~~~~---~gp---~r~~~~gIaE~~~v~~AaGlA~~ 108 (305)
++++++|+|++++|.++++++|+++++++|++. ++. ++.+..|+++ | | +||||+||+|++|+++|+|||+.
T Consensus 392 ~~~~atR~A~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~~~~~-p~~~~R~~d~GIaE~~mv~~AaGlA~~ 470 (711)
T 3uk1_A 392 GETVATRKASQQTIEGLAAVLPELLGGSADLTGSNLTNWKASKAVRANADGP-GVQWGNHINYGVREFGMSAAINGLVLH 470 (711)
T ss_dssp CCCEEHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCCCTTCCBCEECSSSS-SEECCSEEECCSCHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHhhCCCEEEEeccccCcCCcccccchhhhhhhccC-CCCCCcEEEeCccHHHHHHHHHHHHHc
Confidence 466889999999999999999999999999972 221 2345688888 9 8 99999999999999999999994
Q ss_pred -CCeEEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCC-CchHHHHHccCCCcEEEeeCC
Q 021963 109 -GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-SQSPEAFFCHVPGLKVVIPRS 186 (305)
Q Consensus 109 -G~~p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~h-s~~d~a~~~~iP~l~V~~P~d 186 (305)
|++||+++ |++|++|+++|||+ +|+++ +|+ .+++++.+..+|.+|++| +++|+++||++|||+|++|+|
T Consensus 471 ~G~~Pv~~~-f~~F~~~~~~~ir~-~a~~~------lpv-~~v~thdg~gvG~dG~THq~~ed~a~lr~iPnl~V~~Pad 541 (711)
T 3uk1_A 471 GGYKPFGGT-FLTFSDYSRNALRV-AALMK------VPS-IFVFTHDSIGLGEDGPTHQSVEHVASLRLIPNLDVWRPAD 541 (711)
T ss_dssp SSCEEEEEE-EGGGHHHHHHHHHH-HHHHT------CCC-EEEEECCSGGGCTTCTTTCCSSHHHHHHTSTTCEEECCSS
T ss_pred CCCEEEEEE-hHHHHHHHHHHHHH-hhhcC------CCE-EEEEECCCcCcCCCCCccCChhHHHHHhcCCCCEEEecCC
Confidence 99999995 99999999999995 78776 566 666666555567666555 699999999999999999999
Q ss_pred HHHHHHHHHHhHhCCCCEEEeccccccccCccCCCCCC---CcccCCceEEeee--C----CcEEEEEeChhHHHHHHHH
Q 021963 187 PRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDD---YMLPLSEAEVIRE--G----SDITLVGWGAQLSIMEQAC 257 (305)
Q Consensus 187 ~~e~~~~l~~a~~~~~Pv~i~~~~~l~~~~~~~~~~~~---~~~~~gk~~~~~~--g----~dv~Iia~G~~~~~aleAa 257 (305)
+.|++.++++|++.++|+|||++| ...+.++.++ +.++.|++ ++++ | .|++||++|++++.|++|+
T Consensus 542 ~~E~~~~l~~Ai~~~~Pv~ir~~r----~~~p~~~~~~~~~~~i~~G~~-vl~~~~G~~~~~dvtiia~G~~v~~al~Aa 616 (711)
T 3uk1_A 542 TVETAVAWTYAVAHQHPSCLIFSR----QNLAFNARTDAQLANVEKGGY-VLRDWDEEIVARKIILIATGSEVELAMKAV 616 (711)
T ss_dssp HHHHHHHHHHHHHSSSCEEEECCS----SEECCCCCCHHHHHHGGGSSE-EEECCCSSCCSEEEEEEECTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEeeC----CCCCCCCCccccccccCCCeE-EEEecCCCCCCCCEEEEEecHHHHHHHHHH
Confidence 999999999999999999996664 4445444332 46778885 6664 7 7999999999999999999
Q ss_pred HHHHhcCCCeEEEEeccccCCCHHH--HHHHHhccC-cEEEEeCCccccCC
Q 021963 258 LDAEKEGISCELIDLKTLIPWDKET--VEASVRKTG-RLLPRSSGYWRFWC 305 (305)
Q Consensus 258 ~~L~~~Gi~~~vI~~~~i~P~d~~~--i~~~~~~~~-~vvvvEe~~~~~~~ 305 (305)
+.|+++||+++|||++|++|||+++ +++++.++. .+|++|++...+|+
T Consensus 617 ~~L~~~GI~~~Vid~~si~plD~~~~~~~~sv~~~~~~~V~vE~~~~~g~~ 667 (711)
T 3uk1_A 617 EPLAQQGIAARVVSMPSSDVFDRQDAEYRERVLPHGVRRVAIEAGVTDFWR 667 (711)
T ss_dssp HHHHHTTEEEEEEECSCHHHHHTSCHHHHHHHSCTTSCEEEECSSCSGGGH
T ss_pred HHHHHcCCCeEEEecCcCCccchhHHHHHHHhhccCCeEEEEeCCccccHH
Confidence 9999999999999999999999986 567777776 59999999988883
No 13
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.6e-48 Score=393.31 Aligned_cols=253 Identities=14% Similarity=0.135 Sum_probs=216.0
Q ss_pred CcccHHHHHHHHHHHHHhcCCCEEEEecccCCC-cc-cccchhhHhhh-----CC----CcEEecchhHHHHHHHHHHHH
Q 021963 38 KSLNLYSAINQALHIALETDPRAYVFGEDVGFG-GV-FRCTTGLADRF-----GK----SRVFNTPLCEQGIVGFAIGLA 106 (305)
Q Consensus 38 ~~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~g-~~-~~~~~~~~~~~-----gp----~r~~~~gIaE~~~v~~AaGlA 106 (305)
.++++|++++++|.+++++||++|++++|++.+ +. ++.+..|+++| || +||||+||+||+|+++|+|||
T Consensus 373 ~~~atr~a~~~~L~~l~~~~p~vv~~saDl~~s~~t~~~~~~~f~~~~~~~~~~p~~~~~R~id~GIaE~~mv~~A~GlA 452 (700)
T 3rim_A 373 KALATRAASGAVLSALGPKLPELWGGSADLAGSNNTTIKGADSFGPPSISTKEYTAHWYGRTLHFGVREHAMGAILSGIV 452 (700)
T ss_dssp SCEEHHHHHHHHHHHHTTTCTTEEEEESSCHHHHTCSCTTCCEESCGGGCCSSCCEETTCCEEECCSCHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhhCCCEEEEeCCccCCCCcccccchhhcccccccccCCcccCCceeecCccHHHHHHHHHHHH
Confidence 568899999999999999999999999999732 21 23467888888 46 699999999999999999999
Q ss_pred hC-CCeEEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCC-CchHHHHHccCCCcEEEee
Q 021963 107 AM-GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-SQSPEAFFCHVPGLKVVIP 184 (305)
Q Consensus 107 ~~-G~~p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~h-s~~d~a~~~~iP~l~V~~P 184 (305)
+. |++||++ +|..|+.++++|||. +|+++ +|+ .+++++.+..+|.+|++| +++|+++||++|||+|++|
T Consensus 453 ~~gG~~Pv~~-tF~~F~d~~~~~ir~-~al~~------lpv-v~v~thdg~gvG~dG~THq~ied~a~lr~iPnl~V~~P 523 (700)
T 3rim_A 453 LHGPTRAYGG-TFLQFSDYMRPAVRL-AALMD------IDT-IYVWTHDSIGLGEDGPTHQPIEHLSALRAIPRLSVVRP 523 (700)
T ss_dssp HHSSCEEEEE-EEGGGGGGGHHHHHH-HHHHT------CCC-EEEEECCSGGGCTTCTTTSCSSHHHHHHTSTTCEEECC
T ss_pred HcCCCEEEEE-ecHHHHHHHHHHHHH-hcCCC------CCE-EEEEeCCCcccCCCCCccCChhHHHHHhcCCCCEEEeC
Confidence 99 9999999 599999999999985 88877 566 666666655577666555 6999999999999999999
Q ss_pred CCHHHHHHHHHHhHhCC---CCEEEeccccccccCccCCCCC-CCcccCCceEEeeeCC--------cEEEEEeChhHHH
Q 021963 185 RSPRQAKGLLLSCIRDP---NPVVFFEPKWLYRLSVEEVPED-DYMLPLSEAEVIREGS--------DITLVGWGAQLSI 252 (305)
Q Consensus 185 ~d~~e~~~~l~~a~~~~---~Pv~i~~~~~l~~~~~~~~~~~-~~~~~~gk~~~~~~g~--------dv~Iia~G~~~~~ 252 (305)
+|+.|++.++++|++.+ +|++||++| +..+.++.+ .+.+++|+ +++++|+ |++||++|++++.
T Consensus 524 ad~~e~~~~l~~Ai~~~~~~~Pv~ir~~r----~~~~~~~~~~~~~~~~G~-~vlr~g~~~~~~~~~dvtiia~G~~v~~ 598 (700)
T 3rim_A 524 ADANETAYAWRTILARRNGSGPVGLILTR----QGVPVLDGTDAEGVARGG-YVLSDAGGLQPGEEPDVILIATGSEVQL 598 (700)
T ss_dssp SSHHHHHHHHHHHHTTTTCSSCEEEECCS----SEECCCTTCCHHHHHHSC-EEEECCSCCCTTCCCSEEEEECGGGHHH
T ss_pred CCHHHHHHHHHHHHHccCCCCCEEEEecc----ccCCCcCcccccccCCCc-EEEecCCccccCCCCCEEEEEechHHHH
Confidence 99999999999999985 599997665 444555444 36688898 6889986 9999999999999
Q ss_pred HHHHHHHHHhcCCCeEEEEeccccCCCHH--HHHHHHhc--cCcEEEEeCCccccC
Q 021963 253 MEQACLDAEKEGISCELIDLKTLIPWDKE--TVEASVRK--TGRLLPRSSGYWRFW 304 (305)
Q Consensus 253 aleAa~~L~~~Gi~~~vI~~~~i~P~d~~--~i~~~~~~--~~~vvvvEe~~~~~~ 304 (305)
|++|++.|+++||+++|||++|++|||.+ .+++.+.+ ++++|+||++...+|
T Consensus 599 al~Aa~~L~~~Gi~~~VVd~~~i~p~D~~~~~~~~~v~~~~~~~~vtvEe~~~~G~ 654 (700)
T 3rim_A 599 AVAAQTLLADNDILARVVSMPCLEWFEAQPYEYRDAVLPPTVSARVAVEAGVAQCW 654 (700)
T ss_dssp HHHHHHHHHTTTCCEEEEECSCHHHHHHSCHHHHHHHSCTTCCCEEEECSSCSGGG
T ss_pred HHHHHHHHHhcCCCeEEEEeccccccCcccHHHHHHHhcccceEEEEEeCCCchhH
Confidence 99999999999999999999999999994 45555543 678999999999888
No 14
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=100.00 E-value=3.1e-48 Score=391.87 Aligned_cols=254 Identities=13% Similarity=0.143 Sum_probs=213.9
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCEEEEecccCC-Cc-ccccchhhH-hhhCCCcEEecchhHHHHHHHHHHHHhC-CCeE
Q 021963 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVGF-GG-VFRCTTGLA-DRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRA 112 (305)
Q Consensus 37 ~~~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~-g~-~~~~~~~~~-~~~gp~r~~~~gIaE~~~v~~AaGlA~~-G~~p 112 (305)
++++++|+|++++|.++++++|+++++++|++. ++ .++.+..|. ++| |+||||+||+|++|+++|+|||+. |+||
T Consensus 352 ~~~~a~r~a~~~aL~~~~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~~~-p~R~~d~GIaE~~~v~~a~GlA~~gG~~P 430 (663)
T 3kom_A 352 PVKVATRKASQMVLEVLCKNMPEMFGGSADLTGSNNTNWSGSVWLNNTQE-GANYLSYGVREFGMAAIMNGLSLYGGIKP 430 (663)
T ss_dssp CCCEEHHHHHHHHHHHHHHHCTTEEEEECCC--CCSCCCTTCCBTTTCST-TCCEEECCSCHHHHHHHHHHHHHHSSCEE
T ss_pred CcchhHHHHHHHHHHHHHhhCCCEEEEecccCCCCCcccccccccccccC-CCCeEecCccHHHHHHHHHHHHHcCCCEE
Confidence 457899999999999999999999999999973 22 244556784 899 999999999999999999999999 9999
Q ss_pred EEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCC-CchHHHHHccCCCcEEEeeCCHHHHH
Q 021963 113 IAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-SQSPEAFFCHVPGLKVVIPRSPRQAK 191 (305)
Q Consensus 113 ~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~h-s~~d~a~~~~iP~l~V~~P~d~~e~~ 191 (305)
|+++ |++|+.++++||++ +|+++ +|+ .+++++.+...|.+|++| +++|+++||++|||+|++|+|++|++
T Consensus 431 ~~~t-f~~F~~~~~~~ir~-~a~~~------lpv-v~~~t~~g~g~G~dG~THq~~ed~a~lr~iPnl~V~~Pad~~e~~ 501 (663)
T 3kom_A 431 YGGT-FLVFSDYSRNAIRM-SALMK------QPV-VHVMSHDSIGLGEDGPTHQPIEHVPSLRLIPNLSVWRPADTIETM 501 (663)
T ss_dssp EEEE-EGGGHHHHHHHHHH-HHHTT------CCC-EEEEECCSGGGCTTCTTTCCSSHHHHHHTSTTCEEECCCSHHHHH
T ss_pred EEEe-hHHHHHHHHHHHHH-HHhcC------CCE-EEEEeCCccccCCCCCCcCCHHHHHHHhcCCCcEEEeeCCHHHHH
Confidence 9995 99999999999985 78776 566 566556555567666555 69999999999999999999999999
Q ss_pred HHHHHhHh-CCCCEEEeccccccccCccCCCCCC---CcccCCceEEeee--CCcEEEEEeChhHHHHHHHHHHHHhcCC
Q 021963 192 GLLLSCIR-DPNPVVFFEPKWLYRLSVEEVPEDD---YMLPLSEAEVIRE--GSDITLVGWGAQLSIMEQACLDAEKEGI 265 (305)
Q Consensus 192 ~~l~~a~~-~~~Pv~i~~~~~l~~~~~~~~~~~~---~~~~~gk~~~~~~--g~dv~Iia~G~~~~~aleAa~~L~~~Gi 265 (305)
.++++|++ .++|+|||++| ...+.++..+ +.++.|+ +++++ |.|++||++|++++.|++|++.|+++||
T Consensus 502 ~~l~~A~~~~~~Pv~ir~~r----~~~p~~~~~~~~~~~~~~G~-~vl~~~~g~dvtiia~G~~v~~al~Aa~~L~~~Gi 576 (663)
T 3kom_A 502 IAWKEAVKSKDTPSVMVLTR----QNLMPVVQTQHQVANIARGG-YLVKDNPDAKLTIVATGSEVELAVKVANEFEKKGI 576 (663)
T ss_dssp HHHHHHHHCSSCCEEEECCS----SEECCCCCCHHHHHHHTTTC-EEEECCTTCSCEEEECTTHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCEEEEccC----ccCCCcCccccchhcccCce-EEEEecCCCCEEEEEecHHHHHHHHHHHHHHhcCC
Confidence 99999999 79999996664 4445544332 3466774 56777 7899999999999999999999999999
Q ss_pred CeEEEEeccccCCCHHH--HHHHHhcc-CcEEEEeCCccccCC
Q 021963 266 SCELIDLKTLIPWDKET--VEASVRKT-GRLLPRSSGYWRFWC 305 (305)
Q Consensus 266 ~~~vI~~~~i~P~d~~~--i~~~~~~~-~~vvvvEe~~~~~~~ 305 (305)
+++|||++|++|||+++ +++++.++ .++|++|++...+|+
T Consensus 577 ~~~Vi~~~si~p~D~~~~~~~~~vl~~~~~~v~vE~~~~~g~~ 619 (663)
T 3kom_A 577 KLNVASIPCVEVFATQAHEYKKTVIKDDIPAVFVEMAQPDMWY 619 (663)
T ss_dssp CCEEEECSCHHHHHTSCHHHHHHHSCTTSCEEEECSSCCGGGG
T ss_pred CeEEEEcCcCCcccccHHHHHHHhcCCCCeEEEEecCCcccHH
Confidence 99999999999999987 55655554 579999999988884
No 15
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=100.00 E-value=1.7e-47 Score=388.60 Aligned_cols=254 Identities=15% Similarity=0.177 Sum_probs=215.1
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCEEEEecccCCC-ccc-ccchhhHh------hhCCCcEEecchhHHHHHHHHHHHHhC
Q 021963 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVGFG-GVF-RCTTGLAD------RFGKSRVFNTPLCEQGIVGFAIGLAAM 108 (305)
Q Consensus 37 ~~~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~g-~~~-~~~~~~~~------~~gp~r~~~~gIaE~~~v~~AaGlA~~ 108 (305)
++++++|+|++++|.++++++|+++++++|++.+ +.+ +.+..|++ +| |+||||+||+|++|+++|+|||+.
T Consensus 353 ~~~~a~r~a~~~~L~~~~~~~p~v~~~~aDl~~s~~~~~~g~~~f~~~~~~~~~~-p~R~~d~gIaE~~~vg~a~GlA~~ 431 (680)
T 1gpu_A 353 DSAVATRKLSETVLEDVYNQLPELIGGSADLTPSNLTRWKEALDFQPPSSGSGNY-SGRYIRYGIREHAMGAIMNGISAF 431 (680)
T ss_dssp SCCBCHHHHHHHHHHHHTTTCTTEEEEESSCHHHHTCSCTTCCEECCTTTSSEET-TCCEEECCSCHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHhhCCCEEEEecccccccccccccccccccccccccCC-CCceecCCccHHHHHHHHHHHHhc
Confidence 5678999999999999999999999999999722 211 12356877 99 999999999999999999999999
Q ss_pred C-Ce-EEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCC-CchHHHHHccCCCcEEEeeC
Q 021963 109 G-NR-AIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-SQSPEAFFCHVPGLKVVIPR 185 (305)
Q Consensus 109 G-~~-p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~h-s~~d~a~~~~iP~l~V~~P~ 185 (305)
| ++ ||++ +|++|+.++++|||+ +|+++ +|+ .+++++.+...|.+|++| +++|++++|++|||+|++|+
T Consensus 432 Gg~~~P~~~-~f~~F~~~~~~air~-~a~~~------lpv-v~v~t~~g~g~G~dG~tHq~~edla~lr~iP~l~V~~Pa 502 (680)
T 1gpu_A 432 GANYKPYGG-TFLNFVSYAAGAVRL-SALSG------HPV-IWVATHDSIGVGEDGPTHQPIETLAHFRSLPNIQVWRPA 502 (680)
T ss_dssp CTTCEEEEE-EEHHHHGGGHHHHHH-HHHHT------CCC-EEEEECCSGGGCTTCTTTCCSSHHHHHHTSSSCEEECCC
T ss_pred CCCceEEEe-ehHHHHHHHHHHHHH-HHhcC------CCE-EEEEeCCccccCCCCCccCCHHHHHHhcCCCCCEEEecC
Confidence 8 99 9999 599999999999986 78776 566 566555555567666655 69999999999999999999
Q ss_pred CHHHHHHHHHHhHhC-CCCEEEeccccccccCccCCCCCCCc-ccCCceEEeeeC--CcEEEEEeChhHHHHHHHHHHHH
Q 021963 186 SPRQAKGLLLSCIRD-PNPVVFFEPKWLYRLSVEEVPEDDYM-LPLSEAEVIREG--SDITLVGWGAQLSIMEQACLDAE 261 (305)
Q Consensus 186 d~~e~~~~l~~a~~~-~~Pv~i~~~~~l~~~~~~~~~~~~~~-~~~gk~~~~~~g--~dv~Iia~G~~~~~aleAa~~L~ 261 (305)
|++|++.++++|++. ++|+|||++| ...+.++.+++. +++| ++++++| .|++||++|++++.|++|++.|+
T Consensus 503 d~~e~~~~l~~A~~~~~~Pv~i~~~r----~~~~~~~~~~~~~~~~G-~~vl~~g~~~dvtiva~G~~v~~al~Aa~~L~ 577 (680)
T 1gpu_A 503 DGNEVSAAYKNSLESKHTPSIIALSR----QNLPQLEGSSIESASKG-GYVLQDVANPDIILVATGSEVSLSVEAAKTLA 577 (680)
T ss_dssp SHHHHHHHHHHHHHCSSCCEEEECCS----SCBCCCTTCCHHHHTTS-CEEEECCSSCSEEEEECTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcEEEEecC----CCCCCCCCcchhhccCC-CEEEecCCCCCEEEEEEcHHHHHHHHHHHHHH
Confidence 999999999999997 9999997765 444555544444 7788 4788888 89999999999999999999999
Q ss_pred hcCCCeEEEEeccccCCCHHH--HHHHHhccC-cEEEEeCCccccCC
Q 021963 262 KEGISCELIDLKTLIPWDKET--VEASVRKTG-RLLPRSSGYWRFWC 305 (305)
Q Consensus 262 ~~Gi~~~vI~~~~i~P~d~~~--i~~~~~~~~-~vvvvEe~~~~~~~ 305 (305)
++||+++|||++|++|||++. +++++.+++ ++|+||++...+|.
T Consensus 578 ~~Gi~~~Vvd~~~l~pld~~~~~~~~sv~~~~~~~v~vE~~~~~g~~ 624 (680)
T 1gpu_A 578 AKNIKARVVSLPDFFTFDKQPLEYRLSVLPDNVPIMSVEVLATTCWG 624 (680)
T ss_dssp TTTCCEEEEECSCHHHHHHSCHHHHHHHSCSSSCEEEECSSCSTTGG
T ss_pred hcCCCEEEEEcCCCCcchhhhHHHHHHHhccCCceEEEeCCccccHH
Confidence 999999999999999999985 556666664 66999999998883
No 16
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=100.00 E-value=2.6e-47 Score=386.75 Aligned_cols=253 Identities=13% Similarity=0.159 Sum_probs=214.8
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCEEEEecccCC-Cccc-ccchhhHhhhCCCcEEecchhHHHHHHHHHHHHhC-CCeEE
Q 021963 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVGF-GGVF-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAI 113 (305)
Q Consensus 37 ~~~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~-g~~~-~~~~~~~~~~gp~r~~~~gIaE~~~v~~AaGlA~~-G~~p~ 113 (305)
++++++|++++++|.++++.+|+++++++|++. ++.+ +.+..|+++| |+||||+||+|++|+++|+|||+. |++||
T Consensus 352 ~~~~~~r~a~~~~L~~l~~~~p~v~~~~aDl~~s~~~~~~~~~~f~~~~-p~R~id~GIaE~~~v~~a~GlA~~gG~~P~ 430 (669)
T 2r8o_A 352 PAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINEDA-AGNYIHYGVREFGMTAIANGISLHGGFLPY 430 (669)
T ss_dssp CCCEEHHHHHHHHHHHHTTTCTTEEEEESSCHHHHTCCCTTCCBTTTCT-TCSEEECCSCHHHHHHHHHHHHHHSSCEEE
T ss_pred CccHHHHHHHHHHHHHHHhhCCCeEEecCcccccccccccccccccccC-CCCeeecchhHHHHHHHHHHHHHcCCCeEE
Confidence 456899999999999999999999999999972 2222 3456899999 999999999999999999999999 89999
Q ss_pred EEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCC-CchHHHHHccCCCcEEEeeCCHHHHHH
Q 021963 114 AEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-SQSPEAFFCHVPGLKVVIPRSPRQAKG 192 (305)
Q Consensus 114 ~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~h-s~~d~a~~~~iP~l~V~~P~d~~e~~~ 192 (305)
+. +|++|+.++++||++ +|+++ +|+ .+++++.+...+++|++| +++|++++|++|||+|++|+|++|++.
T Consensus 431 ~~-tf~~F~~~~~~~ir~-~a~~~------lpv-v~~~t~~g~~~G~dG~tHq~~edla~lr~iP~l~V~~Pad~~E~~~ 501 (669)
T 2r8o_A 431 TS-TFLMFVEYARNAVRM-AALMK------QRQ-VMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAV 501 (669)
T ss_dssp EE-EEGGGGGTTHHHHHH-HHHTT------CCC-EEEEECCSGGGCTTCTTTCCSSHHHHHHTSTTCEEECCSSHHHHHH
T ss_pred Ee-ehHHHHHHHHHHHHH-HHhcC------CCE-EEEEeCCCcCcCCCCCccCCHHHHHHhcCCCCCEEEecCCHHHHHH
Confidence 98 599999999999997 77776 566 666555555567666666 599999999999999999999999999
Q ss_pred HHHHhHhC-CCCEEEeccccccccCccCCCCCCC---cccCCceEEeee--C-CcEEEEEeChhHHHHHHHHHHHHhcCC
Q 021963 193 LLLSCIRD-PNPVVFFEPKWLYRLSVEEVPEDDY---MLPLSEAEVIRE--G-SDITLVGWGAQLSIMEQACLDAEKEGI 265 (305)
Q Consensus 193 ~l~~a~~~-~~Pv~i~~~~~l~~~~~~~~~~~~~---~~~~gk~~~~~~--g-~dv~Iia~G~~~~~aleAa~~L~~~Gi 265 (305)
++++|++. ++|+|||++|.. .+.++.+++ .+++|+ +++++ | .|++||++|++++.|++|++.|+++||
T Consensus 502 ~l~~a~~~~~~Pv~i~~~r~~----~~~~~~~~~~~~~~~~G~-~vl~~~~g~~dv~iva~G~~v~~al~Aa~~L~~~Gi 576 (669)
T 2r8o_A 502 AWKYGVERQDGPTALILSRQN----LAQQERTEEQLANIARGG-YVLKDCAGQPELIFIATGSEVELAVAAYEKLTAEGV 576 (669)
T ss_dssp HHHHHHHCSSSCEEEECCSSE----ECCCCCCHHHHHHGGGSC-EEEECCSSSCSEEEEECGGGHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCcEEEEeCCCC----CCCCCCccchhhhccCCC-EEEeccCCCCCEEEEEECHHHHHHHHHHHHHHhcCC
Confidence 99999997 999999777643 344444332 267785 67888 7 899999999999999999999999999
Q ss_pred CeEEEEeccccCCCHHH---HHHHHhcc-CcEEEEeCCccccC
Q 021963 266 SCELIDLKTLIPWDKET---VEASVRKT-GRLLPRSSGYWRFW 304 (305)
Q Consensus 266 ~~~vI~~~~i~P~d~~~---i~~~~~~~-~~vvvvEe~~~~~~ 304 (305)
+++|||++|++|||++. +.+.++++ +++|+||++...+|
T Consensus 577 ~~~Vv~~~~~~pld~~~~~~~~~v~~~~~~~vv~vE~~~~~g~ 619 (669)
T 2r8o_A 577 KARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYW 619 (669)
T ss_dssp CEEEEECSCHHHHHTSCHHHHHHHSCTTCCCEEEEEEEEGGGG
T ss_pred CeEEEEeccCCccccchHHHHHHhccccCceEEEEeCCchhhH
Confidence 99999999999999885 54555443 68999999998888
No 17
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=100.00 E-value=9.6e-47 Score=382.74 Aligned_cols=253 Identities=14% Similarity=0.166 Sum_probs=214.8
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCEEEEecccCCCc-c-cccchhhHh-hhCCCcEEecchhHHHHHHHHHHHHhCC--Ce
Q 021963 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVGFGG-V-FRCTTGLAD-RFGKSRVFNTPLCEQGIVGFAIGLAAMG--NR 111 (305)
Q Consensus 37 ~~~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~g~-~-~~~~~~~~~-~~gp~r~~~~gIaE~~~v~~AaGlA~~G--~~ 111 (305)
++++++|++++++|.++++++|+++++++|++.++ . .+.+..|++ +| |+||||+||+|++|+++|+|||+.| +|
T Consensus 363 ~~~~a~r~a~~~~L~~i~~~~p~v~~~~aDl~~s~~~~~~g~~~f~~~~~-~~R~id~gIaE~~~v~~a~GlA~~G~~~~ 441 (675)
T 1itz_A 363 SPGDATRNLSQQCLNALANVVPGLIGGSADLASSNMTLLKMFGDFQKDTA-EERNVRFGVREHGMGAICNGIALHSPGFV 441 (675)
T ss_dssp SCCBCHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCCCTTCCBCCTTCT-TCCBCCCCSCHHHHHHHHHHHHTTCTTCE
T ss_pred CcchHHHHHHHHHHHHHHHhCCCEEEEeccccccccccccccccccccCC-CCCeEeecccHHHHHHHHHHHHhcCCCCE
Confidence 46789999999999999999999999999997221 1 112345886 99 9999999999999999999999999 99
Q ss_pred EEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCC-CchHHHHHccCCCcEEEeeCCHHHH
Q 021963 112 AIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-SQSPEAFFCHVPGLKVVIPRSPRQA 190 (305)
Q Consensus 112 p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~h-s~~d~a~~~~iP~l~V~~P~d~~e~ 190 (305)
||+++ |++|+.++++||++ +|+++ +|+ .+++++.+...+++|++| +++|++++|++|||+|++|+|++|+
T Consensus 442 P~~~t-~~~F~~~~~~~ir~-~a~~~------lpv-v~~~t~~g~g~G~dG~tHq~~edla~lr~iP~l~V~~Pad~~e~ 512 (675)
T 1itz_A 442 PYCAT-FFVFTDYMRGAMRI-SALSE------AGV-IYVMTHDSIGLGEDGPTHQPIEHLVSFRAMPNILMLRPADGNET 512 (675)
T ss_dssp EEEEE-EGGGHHHHHHHHHH-HHHHT------CCC-EEEEECCSGGGCTTCTTTCCSSHHHHHHSSSSCEEECCCSHHHH
T ss_pred EEEEE-HHHHHHHHHHHHHH-HHhcC------CCE-EEEEECCccccCCCCCCcCcHHHHHHhccCCCeEEEECCCHHHH
Confidence 99995 99999999999986 77776 566 555555555567666656 6999999999999999999999999
Q ss_pred HHHHHHhHhC-CCCEEEeccccccccCccCCCCCCC-cccCCceEEeee---C--CcEEEEEeChhHHHHHHHHHHHHhc
Q 021963 191 KGLLLSCIRD-PNPVVFFEPKWLYRLSVEEVPEDDY-MLPLSEAEVIRE---G--SDITLVGWGAQLSIMEQACLDAEKE 263 (305)
Q Consensus 191 ~~~l~~a~~~-~~Pv~i~~~~~l~~~~~~~~~~~~~-~~~~gk~~~~~~---g--~dv~Iia~G~~~~~aleAa~~L~~~ 263 (305)
+.++++|++. ++|+|||++| ...+.++.+++ .+++| ++++++ | .|++||++|++++.|++|++.|+++
T Consensus 513 ~~~l~~a~~~~~~Pv~i~~~r----~~~p~~~~~~~~~~~~G-a~vl~~~~~G~~~dv~iva~G~~v~~al~Aa~~L~~~ 587 (675)
T 1itz_A 513 AGAYKVAVLNRKRPSILALSR----QKLPHLPGTSIEGVEKG-GYTISDNSTGNKPDLIVMGTGSELEIAAKAADELRKE 587 (675)
T ss_dssp HHHHHHHHHCTTSCEEEEECS----SCBCCCTTCCHHHHTTS-SEEEEECCSTTCCSEEEEECGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCcEEEEecC----CCCCCCCCccccccccC-CEEEecccCCCCCCEEEEEECHHHHHHHHHHHHHHhc
Confidence 9999999997 9999997665 44555554444 47888 678888 7 8999999999999999999999999
Q ss_pred CCCeEEEEeccccCCCHHH--HHHHHhcc--CcEEEEeCCccccC
Q 021963 264 GISCELIDLKTLIPWDKET--VEASVRKT--GRLLPRSSGYWRFW 304 (305)
Q Consensus 264 Gi~~~vI~~~~i~P~d~~~--i~~~~~~~--~~vvvvEe~~~~~~ 304 (305)
||+++|||++|++|||++. +++.+.++ +++|+||++...+|
T Consensus 588 Gi~v~Vv~~~~~~pld~~~~~~~~~v~~~~~~~vv~vE~~~~~G~ 632 (675)
T 1itz_A 588 GKTVRVVSFVSWELFDEQSDEYKESVLPAAVTARISIEAGSTLGW 632 (675)
T ss_dssp TCCEEEEECSCHHHHHTSCHHHHHHHSCTTCCCEEEECSSCCTTT
T ss_pred CCcEEEEEeccCcccccchHHHHHHHhccCCceEEEEECCccccH
Confidence 9999999999999999985 44555555 68999999999888
No 18
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=100.00 E-value=8.2e-47 Score=382.96 Aligned_cols=253 Identities=15% Similarity=0.137 Sum_probs=216.7
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCEEEEecccCC-Ccccc-c--chhhHh-hhCCCcEEecchhHHHHHHHHHHHHhC-CC
Q 021963 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFR-C--TTGLAD-RFGKSRVFNTPLCEQGIVGFAIGLAAM-GN 110 (305)
Q Consensus 37 ~~~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~-g~~~~-~--~~~~~~-~~gp~r~~~~gIaE~~~v~~AaGlA~~-G~ 110 (305)
++++++|+|++++|.++++++|+++++++|++. ++.+. . +..|.+ +| |+||||+||+|++|+++|+|+|+. |+
T Consensus 349 ~~~~a~r~a~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~~~~~~f~~~~~-~~R~id~GIaE~~~~~~a~GlA~~GG~ 427 (673)
T 1r9j_A 349 SSAIATRKASENCLAVLFPAIPALMGGSADLTPSNLTRPASANLVDFSSSSK-EGRYIRFGVREHAMCAILNGLDAHDGI 427 (673)
T ss_dssp CSCEEHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCSCGGGCCCBCBTTBT-TCCEEECCSCHHHHHHHHHHHHHHSSC
T ss_pred ccchHHHHHHHHHHHHHHhhCCCEEEEeccccccccccccCcccccccccCC-CCCeEecCccHHHHHHHHHHHHhcCCC
Confidence 357899999999999999999999999999973 22210 0 234887 99 999999999999999999999999 69
Q ss_pred eEEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCC-CchHHHHHccCCCcEEEeeCCHHH
Q 021963 111 RAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-SQSPEAFFCHVPGLKVVIPRSPRQ 189 (305)
Q Consensus 111 ~p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~h-s~~d~a~~~~iP~l~V~~P~d~~e 189 (305)
+||+++ |++|+.++++||++ +|+++ +|+ .+++++.+...+++|++| +++|++++|++||++|++|+|++|
T Consensus 428 ~P~~~~-~~~F~~~~~~~ir~-~a~~~------~pv-v~~~t~~g~g~G~dG~tHq~~edla~lr~iP~l~V~~Pad~~e 498 (673)
T 1r9j_A 428 IPFGGT-FLNFIGYALGAVRL-AAISH------HRV-IYVATHDSIGVGEDGPTHQPVELVAALRAMPNLQVIRPSDQTE 498 (673)
T ss_dssp EEEEEE-EGGGGGGGHHHHHH-HHHHT------CCC-EEEEECCSGGGCTTCTTTCCSSHHHHHHHSTTCEEECCSSHHH
T ss_pred EEEEEe-hHHHHHHHHHHHHH-HHhcC------CCE-EEEEECCccCcCCCCcccCCHHHHHHHcCCCCCEEEeCCCHHH
Confidence 999995 99999999999996 78776 466 555555554567676666 599999999999999999999999
Q ss_pred HHHHHHHhHhC-CCCEEEeccccccccCccCCCCCCC-cccCCceEEeeeC--CcEEEEEeChhHHHHHHHHHHHHhcCC
Q 021963 190 AKGLLLSCIRD-PNPVVFFEPKWLYRLSVEEVPEDDY-MLPLSEAEVIREG--SDITLVGWGAQLSIMEQACLDAEKEGI 265 (305)
Q Consensus 190 ~~~~l~~a~~~-~~Pv~i~~~~~l~~~~~~~~~~~~~-~~~~gk~~~~~~g--~dv~Iia~G~~~~~aleAa~~L~~~Gi 265 (305)
++.++++|++. ++|+||+++|. ..+.++.+.+ .+++| ++++++| .|++||++|++++.|++|++.|+++ |
T Consensus 499 ~~~~l~~a~~~~~~Pv~i~~~r~----~~~~~~~~~~~~~~~G-a~vl~~g~~~dv~lia~G~~v~~al~Aa~~L~~~-i 572 (673)
T 1r9j_A 499 TSGAWAVALSSIHTPTVLCLSRQ----NTEPQSGSSIEGVRHG-AYSVVDVPDLQLVIVASGSEVSLAVDAAKALSGE-L 572 (673)
T ss_dssp HHHHHHHHHHCTTCCEEEECCSS----EECCCTTCCHHHHHTS-CEEEECCTTCSEEEEECGGGHHHHHHHHHHHTTT-C
T ss_pred HHHHHHHHHHhCCCeEEEEEcCC----CCCCCCCcccccccCC-CEEEeeCCCCCEEEEEechhHHHHHHHHHHHHhc-C
Confidence 99999999997 99999977653 4445544444 47788 6788888 8999999999999999999999998 9
Q ss_pred CeEEEEeccccCCCHHH---HHHHHhccCcEEEEeCCccccCC
Q 021963 266 SCELIDLKTLIPWDKET---VEASVRKTGRLLPRSSGYWRFWC 305 (305)
Q Consensus 266 ~~~vI~~~~i~P~d~~~---i~~~~~~~~~vvvvEe~~~~~~~ 305 (305)
+++|||++|++|||++. +.+++++++++|+||++...+|.
T Consensus 573 ~~~Vv~~~sl~pld~~~~~~i~~~~~~~~~vv~vE~~~~~g~~ 615 (673)
T 1r9j_A 573 RVRVVSMPCQELFDAQPDTYRQAVLPAGVPVVSVEAYVSFGWE 615 (673)
T ss_dssp CEEEEECSCHHHHHTSCHHHHHHHSCTTSCEEEECSSCCTTGG
T ss_pred CEEEEeCCCCchhhcccHHHHHHHhccCCeEEEEeCCCccchH
Confidence 99999999999999986 88889999999999999998883
No 19
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=100.00 E-value=1.4e-46 Score=380.25 Aligned_cols=254 Identities=15% Similarity=0.121 Sum_probs=213.4
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCEEEEecccCC-Cccc-ccchhhHh-hhCCCcEEecchhHHHHHHHHHHHHhCC-CeE
Q 021963 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVGF-GGVF-RCTTGLAD-RFGKSRVFNTPLCEQGIVGFAIGLAAMG-NRA 112 (305)
Q Consensus 37 ~~~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~-g~~~-~~~~~~~~-~~gp~r~~~~gIaE~~~v~~AaGlA~~G-~~p 112 (305)
++++++|++++++|.++++++|+++++++|++. ++.+ +.+..|++ +| |+||||+||+|++|+++|+|+|+.| ++|
T Consensus 346 ~~~~~~r~a~~~~L~~~~~~~p~~~~~~aDl~~s~~~~~~~~~~f~~~~~-p~R~i~~gIaE~~~~~~a~GlA~~Gg~~P 424 (651)
T 2e6k_A 346 DKPIATRAASGRALNLLAPRLPELLGGSADLTPSNNTKAEGMEDFSRANP-LGRYLHFGVREHAMGAILNGLNLHGGYRA 424 (651)
T ss_dssp CSCBCHHHHHHHHHHHHGGGCTTEEEEESSCHHHHTCSCTTCCBCBTTBT-TCCEEECCSCHHHHHHHHHHHHHHSSCEE
T ss_pred CccHHHHHHHHHHHHHHHhhCCCEEEEeCccccccccccccccccCccCC-CCceEecCcCHHHHHHHHHHHHHcCCCEE
Confidence 347899999999999999999999999999972 2111 13567887 99 9999999999999999999999998 999
Q ss_pred EEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCC-CchHHHHHccCCCcEEEeeCCHHHHH
Q 021963 113 IAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-SQSPEAFFCHVPGLKVVIPRSPRQAK 191 (305)
Q Consensus 113 ~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~h-s~~d~a~~~~iP~l~V~~P~d~~e~~ 191 (305)
|++ +|+.|+.++++|||. +|+++ +|+ .+++++.+...+++|++| +++|++++|++||++|++|+|++|++
T Consensus 425 ~~~-t~~~F~~~~~~air~-~a~~~------lpv-v~~~t~~g~g~G~dG~tHq~~edla~lr~iP~l~V~~Pad~~E~~ 495 (651)
T 2e6k_A 425 YGG-TFLVFSDYMRPAIRL-AALMG------VPT-VFVFTHDSIALGEDGPTHQPVEHLMSLRAMPNLFVIRPADAYETF 495 (651)
T ss_dssp EEE-EEGGGGGGSHHHHHH-HHHHT------CCC-EEEEECCSGGGCTTCTTTCCSSHHHHHHTSTTCEEECCSSHHHHH
T ss_pred EEE-eHHHHHHHHHHHHHH-HHhcC------CCE-EEEEECCccccCCCcCccccHHHHHHhcCCCCcEEEecCCHHHHH
Confidence 999 499999999999885 78776 566 555555655577677666 58999999999999999999999999
Q ss_pred HHHHHhHhC-CCCEEEeccccccccCccCCCCCCC-cccCCceEEeeeC--CcEEEEEeChhHHHHHHHHHHHHhcCCCe
Q 021963 192 GLLLSCIRD-PNPVVFFEPKWLYRLSVEEVPEDDY-MLPLSEAEVIREG--SDITLVGWGAQLSIMEQACLDAEKEGISC 267 (305)
Q Consensus 192 ~~l~~a~~~-~~Pv~i~~~~~l~~~~~~~~~~~~~-~~~~gk~~~~~~g--~dv~Iia~G~~~~~aleAa~~L~~~Gi~~ 267 (305)
.++++|++. ++|+||+++|. ..+.++.+++ .++.| ++++++| .|++||++|++++.|++|++.|+++||++
T Consensus 496 ~~l~~A~~~~~~Pv~i~~~r~----~~~~~~~~~~~~~~~G-~~vl~~g~~~dv~iva~G~~v~~al~Aa~~L~~~Gi~~ 570 (651)
T 2e6k_A 496 YAWLVALRRKEGPTALVLTRQ----AVPLLSPEKARGLLRG-GYVLEDVEEPQGVLVATGSEVHLALRAQALLREKGVRV 570 (651)
T ss_dssp HHHHHHHHCCSSCEEEECCSS----CBCCCCHHHHGGGGGS-SEEEECCSSCSEEEEECTTHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHcCCCCEEEEEeCC----CCCCCCcchhhhhcCC-CEEEeeCCCCCEEEEEECHHHHHHHHHHHHHHhcCCcE
Confidence 999999997 89999987764 3344433222 36677 4778887 89999999999999999999999999999
Q ss_pred EEEEeccccCCCHHH---HHHHHhccCcEEEEeCCccccCC
Q 021963 268 ELIDLKTLIPWDKET---VEASVRKTGRLLPRSSGYWRFWC 305 (305)
Q Consensus 268 ~vI~~~~i~P~d~~~---i~~~~~~~~~vvvvEe~~~~~~~ 305 (305)
+|||++|++|||++. +.+.+++++++||||++...+|.
T Consensus 571 ~Vv~~~~~~p~d~~~~~~~~~v~~~~~~vv~vE~~~~~G~~ 611 (651)
T 2e6k_A 571 RVVSLPSFELFAAQPEAYRKEVLPPGLPVVAVEAGASLGWE 611 (651)
T ss_dssp EEEECSCHHHHHTSCHHHHHHHSCTTSCEEEECSSCCTTGG
T ss_pred EEEecCcCCccccccHHHHHHHhCcCCeEEEEeCCccCchH
Confidence 999999999999985 44444455789999999998883
No 20
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=100.00 E-value=2.7e-45 Score=380.27 Aligned_cols=288 Identities=19% Similarity=0.327 Sum_probs=239.1
Q ss_pred hHHHHHhhc--CCCCcccchhhHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHhcCCCEEEEecccCCC-----------
Q 021963 4 GLRRFVGSL--SRRNLSTACANKQLIQQHDGGVGSGKSLNLYSAINQALHIALETDPRAYVFGEDVGFG----------- 70 (305)
Q Consensus 4 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~g----------- 70 (305)
.|+.++.++ .+++|+.++..+++++.+..-...++.++|..+++.+|.+++++|++|+++++|++.|
T Consensus 553 ~l~~i~~~~~~~p~~~~~~~~v~~~~~~R~~~~~~~~~~dw~~~e~~al~~l~~~~~~V~~~g~Dv~~gTfs~rh~v~~d 632 (933)
T 2jgd_A 553 RLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHN 632 (933)
T ss_dssp HHHHHHHHTTCCCTTSCCCHHHHHHHHHHHHHHTTSSCBCHHHHHHHHHHHHHTTTCCEEEEETTTTTCTTSCCCCSEEC
T ss_pred HHHHHHhhhcCCCCCCcccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHhcCCCEEEECCccCCcchhhhhhhccc
Confidence 467777764 4889999999999998876544555568999999999999999999999999999854
Q ss_pred ----cccccchhhHhhhCCCcEEecchhHHHHHHHHHHHHhCCCe--EEEEecccchHH---hHHHHHHHHH-hhccccc
Q 021963 71 ----GVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNR--AIAEIQFADYIF---PAFDQIVNEA-AKFRYRS 140 (305)
Q Consensus 71 ----~~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~AaGlA~~G~~--p~~~~~~~~F~~---ra~dqi~~~~-a~~~~~~ 140 (305)
+.|..+..|.++|||+||+|+||+|++++|+|+|+|+.|.+ |+++.+|++|++ |++|||++++ +++..
T Consensus 633 ~~~g~~~~~l~~l~~~~gp~rv~ds~IaE~~~vg~a~G~A~~G~~~lpv~e~qf~dF~~~AQra~DQii~~~~ak~~~-- 710 (933)
T 2jgd_A 633 QSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGR-- 710 (933)
T ss_dssp SSSSCEECGGGCSCTTCCCEEEECCCSCHHHHHHHHHHHHHHCTTSEEEEEC-CGGGGGGGHHHHHHTTTTHHHHHCC--
T ss_pred ccCCceeechHHHHHHcCCCeEEECCcCHHHHHHHHHHHHhcCCCCCCEEEEEEhhhhcccHHHHHHHHHHHHHHHcc--
Confidence 34456889999999999999999999999999999999998 998768999996 9999999988 76542
Q ss_pred CCCcccceeEEEcCCcCCCCCCCCCCchHHHHH--ccCCCcEEEeeCCHHHHHHHHHHhH-hC-CCCEEEeccccccccC
Q 021963 141 GNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFF--CHVPGLKVVIPRSPRQAKGLLLSCI-RD-PNPVVFFEPKWLYRLS 216 (305)
Q Consensus 141 ~~~~~v~~lv~~~~~g~~~~~g~~hs~~d~a~~--~~iP~l~V~~P~d~~e~~~~l~~a~-~~-~~Pv~i~~~~~l~~~~ 216 (305)
.. +++++.+.|..+.+++||++.+++++ +++|||+|++|+|+.|++.++++++ +. ++|++|++||+++|.+
T Consensus 711 ----~~-~vv~~l~~G~~g~G~~Hss~~~E~~l~~~~~pnm~V~~Pst~~e~~~lLr~a~~~~~~~Pvii~~pk~l~r~~ 785 (933)
T 2jgd_A 711 ----MC-GLVMLLPHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHP 785 (933)
T ss_dssp ----CC-CCEEEEECCCSSSCTTSSCCCHHHHHHTCCTTCCEEECCCSHHHHHHHHHHHHHSSCCCCEEEEECSGGGGCT
T ss_pred ----CC-CEEEEEeCCCCCCCcccccchHHHHHHHhCCCCeEEEecCCHHHHHHHHHHHHHhcCCCcEEEEecchhccCC
Confidence 33 66777766766666677776566665 5669999999999999999999995 64 8999999999999864
Q ss_pred cc-----CCCCCCCcccCCceEEeeeCCcE--EEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhc
Q 021963 217 VE-----EVPEDDYMLPLSEAEVIREGSDI--TLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRK 289 (305)
Q Consensus 217 ~~-----~~~~~~~~~~~gk~~~~~~g~dv--~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~ 289 (305)
.. +++..++.+++|++++++ |+|+ +|+++|.+...+++|++.|+++ +++|||+++|+|||+++|.+++++
T Consensus 786 ~~~~~~~~~~~~~f~~~ig~~~~~~-g~dV~~vI~~~G~v~~~l~aa~~~l~~~--~v~VIdl~~l~Pld~e~i~~~~~k 862 (933)
T 2jgd_A 786 LAVSSLEELANGTFLPAIGEIDELD-PKGVKRVVMCSGKVYYDLLEQRRKNNQH--DVAIVRIEQLYPFPHKAMQEVLQQ 862 (933)
T ss_dssp TCCBCHHHHHHCCCCSEECCCSCCC-GGGCCEEEEECTTHHHHHHHHHHHTTCC--SEEEEEECEEESCCHHHHHHHHGG
T ss_pred CCcCCccccCCCceeecCCcceEee-cCcceEEEEEchHHHHHHHHHHHHcccC--CeEEEEeeccCCCCHHHHHHHHHh
Confidence 21 122245667889998887 8899 6777777777777777888755 999999999999999999999999
Q ss_pred cC---cEEEEeCCcc
Q 021963 290 TG---RLLPRSSGYW 301 (305)
Q Consensus 290 ~~---~vvvvEe~~~ 301 (305)
++ +||+|||+..
T Consensus 863 ~~~~~~vv~veE~~~ 877 (933)
T 2jgd_A 863 FAHVKDFVWCQEEPL 877 (933)
T ss_dssp GTTCCEEEEEEEEET
T ss_pred CCCCceEEEEecCCC
Confidence 98 8999999976
No 21
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=100.00 E-value=3.6e-43 Score=362.49 Aligned_cols=287 Identities=18% Similarity=0.209 Sum_probs=226.3
Q ss_pred hHHHHHhhc--CCCCcccchhhHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHhcCCCEEEEecccCC------------
Q 021963 4 GLRRFVGSL--SRRNLSTACANKQLIQQHDGGVGSGKSLNLYSAINQALHIALETDPRAYVFGEDVGF------------ 69 (305)
Q Consensus 4 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~------------ 69 (305)
.|+.++..+ .+++|+.++..++.++.+..-... +.+.|.-+-..+..+|+++|++|+++++|++.
T Consensus 480 ~l~~~~~~~~~~p~~~~~~~~v~~~~~~R~~m~~~-~~i~~a~~e~la~~~l~~~~~~V~~~G~Dv~~~Tfs~rh~v~~d 558 (868)
T 2yic_A 480 MLQRIGDAHLALPEGFTVHPRVRPVLEKRREMAYE-GRIDWAFAELLALGSLIAEGKLVRLSGQDTQRGTFTQRHAVIVD 558 (868)
T ss_dssp HHHHHHHHTTCCCTTCCCCTTTHHHHHHHHHHHHH-CCBCHHHHHHHHHHHHHHTTCEEEEEETTTTTCTTSCCCSSEEC
T ss_pred HHHHHHHhhccCCcccccchhHHHHHHHHHHHhhh-hhhhHHHHHHHHHHHHHhcCCCEEEEcCcCCccchhhcchhccc
Confidence 466676654 377888888887777665321111 22555444444566899999999999999985
Q ss_pred ---Ccccccchhh------HhhhCCCcEEecchhHHHHHHHHHHHHhCC--CeEEEEecccchHHhH---HHHHHHHHhh
Q 021963 70 ---GGVFRCTTGL------ADRFGKSRVFNTPLCEQGIVGFAIGLAAMG--NRAIAEIQFADYIFPA---FDQIVNEAAK 135 (305)
Q Consensus 70 ---g~~~~~~~~~------~~~~gp~r~~~~gIaE~~~v~~AaGlA~~G--~~p~~~~~~~~F~~ra---~dqi~~~~a~ 135 (305)
|+.|..++.| .+++||+||+|+||+|++++|+|+|+|+.| .+|+++.+|++|+++| +|||+++...
T Consensus 559 ~~~g~~~~~~~~l~~~~~~~~~~~p~Rv~ds~IsE~~~vG~a~G~A~~G~~~~~i~eaqf~dF~~~AQ~~~DQ~i~~~~~ 638 (868)
T 2yic_A 559 RKTGEEFTPLQLLATNPDGTPTGGKFLVYNSALSEFAAVGFEYGYSVGNPDAMVLWEAQFGDFVNGAQSIIDEFISSGEA 638 (868)
T ss_dssp TTTCCEECGGGGGGBCTTSCBCSCEEEEEECCSCSHHHHHHHHHHHHHCTTSEEEEECSSGGGGGGGHHHHHHTTTTHHH
T ss_pred cCCCceecchhhhcccccchhhcCCcEEEECCccHHHHHHHHHHHHccCCCCceEEEEehHHHHhhHHHHHHHHHHHHHH
Confidence 5567778899 776679999999999999999999999999 4677788999999888 9999987632
Q ss_pred cccccCCCcccceeEEEcCCcCCCCCCCCCC---chHHHHHccCCCcEEEeeCCHHHHHHHHHHhHhC--CCCEEEeccc
Q 021963 136 FRYRSGNQFNCGGLTVRAPYGAVGHGGHYHS---QSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRD--PNPVVFFEPK 210 (305)
Q Consensus 136 ~~~~~~~~~~v~~lv~~~~~g~~~~~g~~hs---~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a~~~--~~Pv~i~~~~ 210 (305)
+| + .++ +++++.+.|+.| +|++|| .|++..|+++|||+|++|+|+.|++.++++++.. ++|+||++||
T Consensus 639 -k~--~--~~~-~vvi~~p~G~~G-~Gp~Hs~~~~E~~l~l~~~pnm~V~~Ps~p~~~~~lLr~a~~~~~~~Pvii~~pk 711 (868)
T 2yic_A 639 -KW--G--QLS-DVVLLLPHGHEG-QGPDHTSGRIERFLQLWAEGSMTIAMPSTPANYFHLLRRHGKDGIQRPLIVFTPK 711 (868)
T ss_dssp -HH--C--CCC-CCEEEEECCCSS-SCTTSSCCCHHHHHHHCCTTSCEEECCCSHHHHHHHHHHHHHSSCCCCEEEEECS
T ss_pred -Hh--C--CCC-CEEEEecCCCCC-CChhhcCCcHHHHHhcCCCCCCEEEEeCCHHHHHHHHHHHHhcCCCCcEEEEech
Confidence 22 1 144 777777766665 666665 3455556999999999999999999999998875 4999999999
Q ss_pred cccccCccCCC-----CCCCcccCCceEE---eeeCCcE--EEEEeChhHHHHHHHHHHHHhcC-CCeEEEEeccccCCC
Q 021963 211 WLYRLSVEEVP-----EDDYMLPLSEAEV---IREGSDI--TLVGWGAQLSIMEQACLDAEKEG-ISCELIDLKTLIPWD 279 (305)
Q Consensus 211 ~l~~~~~~~~~-----~~~~~~~~gk~~~---~~~g~dv--~Iia~G~~~~~aleAa~~L~~~G-i~~~vI~~~~i~P~d 279 (305)
+|+|.+.+.-+ ++.+..++|++++ +++|+|+ +|||+|.+ ..++++++ +++| ++++|||+++|+|||
T Consensus 712 ~llR~~~~~~~~~~~~~~~f~~~ig~~~~~~~l~~g~dv~r~Ii~~G~~-~~~l~aa~--~~~g~i~v~VIdl~~l~Pld 788 (868)
T 2yic_A 712 SMLRNKAAVSDIRDFTESKFRSVLEEPMYTDGEGDRNKVTRLLLTSGKI-YYELAARK--AKENREDVAIVRIEQLAPLP 788 (868)
T ss_dssp GGGGCTTSCBCHHHHHSCCCCSEECCHHHHTSSCCGGGCCEEEEECSTH-HHHHHHHH--HHHTCTTEEEEEECEEESCC
T ss_pred HHhCCCCCCCCccccCCCCceecCCcceeecccccCCceeEEEEEecHH-HHHHHHHH--HhCCCCCEEEEEeeecCCCC
Confidence 99997543111 1223337899987 7889999 99999998 67776666 5679 999999999999999
Q ss_pred HHHHHHHHhccCc---EEEEeCCcc
Q 021963 280 KETVEASVRKTGR---LLPRSSGYW 301 (305)
Q Consensus 280 ~~~i~~~~~~~~~---vvvvEe~~~ 301 (305)
.++|.++++++++ ||+|||+..
T Consensus 789 ~~~i~~~~~k~~~~~~vv~veE~~~ 813 (868)
T 2yic_A 789 RRRLAETLDRYPNVKEKFWVQEEPA 813 (868)
T ss_dssp HHHHHHHHHTCTTCCEEEEEEEEET
T ss_pred HHHHHHHHHhcCCCceEEEEEeCCC
Confidence 9999999999988 899998876
No 22
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=9.9e-43 Score=367.04 Aligned_cols=287 Identities=19% Similarity=0.235 Sum_probs=231.7
Q ss_pred hHHHHHhhcC--CCCcccchhhHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHhcCCCEEEEecccCC------------
Q 021963 4 GLRRFVGSLS--RRNLSTACANKQLIQQHDGGVGSGKSLNLYSAINQALHIALETDPRAYVFGEDVGF------------ 69 (305)
Q Consensus 4 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~------------ 69 (305)
.|+.++..+. +++|+.++..++.++.+..-... +.+.|.-+-..+..+|++++++|+++++|++.
T Consensus 725 ~l~~~~~~~~~~p~~~~~~~~v~~~~~~r~~m~~~-~~i~~a~~e~la~~~ll~~~~~V~l~GeDv~rgtfs~rh~v~~d 803 (1113)
T 2xt6_A 725 MLQRIGDAHLALPEGFTVHPRVRPVLEKRREMAYE-GRIDWAFAELLALGSLIAEGKLVRLSGQDTQRGTFTQRHAVIVD 803 (1113)
T ss_dssp HHHHHHHHTTCCCTTCCCCTTTHHHHHHHHHHHHH-CCBCHHHHHHHHHHHHHHTTCEEEEEETTTTTCTTSCCCSSEEC
T ss_pred HHHHHHHhhccCCcccccchhHHHHHHHHHHHhhh-hhhhHHHHHHHHHHHHHhcCCCEEEEcccCCCccchhcchheec
Confidence 5677766544 78899988888888766322222 33667666667788999999999999999985
Q ss_pred ---Ccccccchhh------HhhhCCCcEEecchhHHHHHHHHHHHHhCC--CeEEEEecccchHHhH---HHHHHHHHhh
Q 021963 70 ---GGVFRCTTGL------ADRFGKSRVFNTPLCEQGIVGFAIGLAAMG--NRAIAEIQFADYIFPA---FDQIVNEAAK 135 (305)
Q Consensus 70 ---g~~~~~~~~~------~~~~gp~r~~~~gIaE~~~v~~AaGlA~~G--~~p~~~~~~~~F~~ra---~dqi~~~~a~ 135 (305)
|+.|..++.| .+++||+||+|+||+|++++|+|+|+|+.| .+|+++.+|++|+++| +|||++++..
T Consensus 804 ~~~g~~~~~l~~l~~~~~~~~~~~p~rv~ds~IsE~~~vg~a~G~A~~G~~~~~i~Eaqf~dF~~~aQ~~~DQ~i~~~~~ 883 (1113)
T 2xt6_A 804 RKTGEEFTPLQLLATNPDGTPTGGKFLVYNSALSEFAAVGFEYGYSVGNPDAMVLWEAQFGDFVNGAQSIIDEFISSGEA 883 (1113)
T ss_dssp TTTCCEECGGGGGGBCTTSCBCSCEEEEEECCSCSHHHHHHHHHHHHHCTTSEEEEECSSGGGGGGGHHHHHHTTTTHHH
T ss_pred ccCCceecchhccccccccchhcCCcEEEECCCCHHHHHHHHHHHHhcCCCCceEEEEEEHHHHhhhHHHHHHHHHHHHH
Confidence 4556678899 776779999999999999999999999999 5677888999999887 9999988732
Q ss_pred cccccCCCcccceeEEEcCCcCCCCCCCCCCc-hHHHHH--ccCCCcEEEeeCCHHHHHHHHHHhHhC--CCCEEEeccc
Q 021963 136 FRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQ-SPEAFF--CHVPGLKVVIPRSPRQAKGLLLSCIRD--PNPVVFFEPK 210 (305)
Q Consensus 136 ~~~~~~~~~~v~~lv~~~~~g~~~~~g~~hs~-~d~a~~--~~iP~l~V~~P~d~~e~~~~l~~a~~~--~~Pv~i~~~~ 210 (305)
+| + .++ +++++.+.|+.| +|++||+ .+++++ +++|||+|++|+|+.|++.++++++.. ++|+||++||
T Consensus 884 -k~--~--~~~-~vv~~lp~G~~G-~G~~Hs~~~~E~~l~l~~~pnm~V~~Ps~~~~~~~lLr~a~~~~~~~Pvii~~pk 956 (1113)
T 2xt6_A 884 -KW--G--QLS-DVVLLLPHGHEG-QGPDHTSGRIERFLQLWAEGSMTIAMPSTPANYFHLLRRHGKDGIQRPLIVFTPK 956 (1113)
T ss_dssp -HH--C--CCC-CCEEEEECCCSS-SCTTSSCCCHHHHHHHCCTTSCEEECCSSHHHHHHHHHHHHHSSCCCCEEEEECS
T ss_pred -Hh--C--CCC-CEEEEeCCCCCC-CChhhhcccHHHHHhcCCCCCcEEEecCCHHHHHHHHHHHHhccCCCCEEEEech
Confidence 12 1 245 778887766655 6677764 366665 999999999999999999999998875 5999999999
Q ss_pred cccccCccC--C---CCCCCcccCCceEE---eeeCCcE--EEEEeChhHHHHHHHHHHHHhcC-CCeEEEEeccccCCC
Q 021963 211 WLYRLSVEE--V---PEDDYMLPLSEAEV---IREGSDI--TLVGWGAQLSIMEQACLDAEKEG-ISCELIDLKTLIPWD 279 (305)
Q Consensus 211 ~l~~~~~~~--~---~~~~~~~~~gk~~~---~~~g~dv--~Iia~G~~~~~aleAa~~L~~~G-i~~~vI~~~~i~P~d 279 (305)
+|+|.+.+. + .+..+..++|++++ +++|+|+ +|||+|.+ +.++++++ +++| ++++|||+++|+|||
T Consensus 957 ~L~R~~~~~~~~~~~~~~~f~~~ig~~~~~~~l~~g~dv~r~iv~~G~~-~~~l~aa~--~~~g~i~v~VIdl~~l~Pld 1033 (1113)
T 2xt6_A 957 SMLRNKAAVSDIRDFTESKFRSVLEEPMYTDGEGDRNKVTRLLLTSGKI-YYELAARK--AKENREDVAIVRIEQLAPLP 1033 (1113)
T ss_dssp GGGSCSSSCBCHHHHHSCCCCSEECCHHHHTSCCCSTTCCEEEEECSTH-HHHHHHHH--HHHTCTTEEEEEESEEESCC
T ss_pred HHhCCCCCCCcccccCCCCccccCCcceeeccccCccccCEEEEEECHH-HHHHHHHH--HhCCCCCEEEEEeeeecCCC
Confidence 999976431 1 11123337899987 7899999 99999998 77777776 5679 999999999999999
Q ss_pred HHHHHHHHhccCc---EEEEeCCcc
Q 021963 280 KETVEASVRKTGR---LLPRSSGYW 301 (305)
Q Consensus 280 ~~~i~~~~~~~~~---vvvvEe~~~ 301 (305)
+++|.++++++++ +|++||+..
T Consensus 1034 ~~~i~~~~~k~~~~~~vv~veE~~~ 1058 (1113)
T 2xt6_A 1034 RRRLAETLDRYPNVKEKFWVQEEPA 1058 (1113)
T ss_dssp HHHHHHHHTTCTTCCEEEEEEEEET
T ss_pred HHHHHHHHHhCCCCceEEEEecCCC
Confidence 9999999999998 899999876
No 23
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=100.00 E-value=4.2e-39 Score=332.83 Aligned_cols=234 Identities=12% Similarity=0.092 Sum_probs=187.3
Q ss_pred CcccHHHHHHHHHHHHHhcC---CCEEEEecccCC--Cc-----ccc----cchhhH-----------hhhCCCcEEecc
Q 021963 38 KSLNLYSAINQALHIALETD---PRAYVFGEDVGF--GG-----VFR----CTTGLA-----------DRFGKSRVFNTP 92 (305)
Q Consensus 38 ~~~~~r~a~~~~L~~l~~~~---~~iv~~~~D~~~--g~-----~~~----~~~~~~-----------~~~gp~r~~~~g 92 (305)
.++++|++++++|.++++++ ++||++++|+.. |+ +.+ ....|. +.| |+||||+|
T Consensus 490 ~~~atr~afg~~L~~l~~~~~~~~~iV~i~pd~~~~~G~~dl~~S~~i~~~~~~~f~~~d~~~~~~~~e~~-~~R~~d~G 568 (886)
T 2qtc_A 490 KEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDE-KGQILQEG 568 (886)
T ss_dssp SCBCHHHHHHHHHHHHTTCTTTTTTEEEEESSCSGGGTCHHHHHHHCBBCC-----------------CBT-TCCBEECC
T ss_pred CcchHHHHHHHHHHHHHhhcccCCcEEEEcCccccccCcccccccccccccCCcccccccchhhhhhhhcC-CCceeeec
Confidence 56789999999999999998 999999999541 22 111 123443 577 99999999
Q ss_pred hhHHHH-H---HHHHHHHhCC--CeEEEEecccch-HHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCC
Q 021963 93 LCEQGI-V---GFAIGLAAMG--NRAIAEIQFADY-IFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH 165 (305)
Q Consensus 93 IaE~~~-v---~~AaGlA~~G--~~p~~~~~~~~F-~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~h 165 (305)
|+|+++ + ++|+|+|+.| ++||+.+ |++| ++|++||+++++++++ .++ .+.........+++|.+|
T Consensus 569 IaE~~a~~~~~g~a~GlA~~G~~~~P~~~~-ys~F~~qRa~Dqi~~~~d~~~------~~v-~l~~~~~~~~~g~dG~tH 640 (886)
T 2qtc_A 569 INELGAGCSWLAAATSYSTNNLPMIPFYIY-YSMFGFQRIGDLCWAAGDQQA------RGF-LIGGTSGRTTLNGEGLQH 640 (886)
T ss_dssp SCHHHHHHHHHHHHTHHHHTSCCCEEEEEE-EGGGSHHHHHHHHHHHHHTTC------CCE-EEEESCSTTTSTTTCTTT
T ss_pred cCchhhhhHHHHHHHHHHhcCCCceEEEEE-ehHHHHHHHHHHHHHHHHHhc------CCE-EEEEecCcccCCCCCCcc
Confidence 999995 5 7999999999 8999984 9999 6999999999998766 233 332222233456777777
Q ss_pred C-chHHHHHccCCCcEEEeeCCHHHHHHHHHHhHhC-CCC----EEEeccccccccCc--cCCCCCC-CcccCCceEEee
Q 021963 166 S-QSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRD-PNP----VVFFEPKWLYRLSV--EEVPEDD-YMLPLSEAEVIR 236 (305)
Q Consensus 166 s-~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a~~~-~~P----v~i~~~~~l~~~~~--~~~~~~~-~~~~~gk~~~~~ 236 (305)
+ .+|+++++++||++|+.|+|+.|++.+++++++. ++| +++++++.. .+. +.++.+. +.+ +|++++++
T Consensus 641 q~~~~~a~lr~iPnl~V~~Pada~E~~~~l~~al~~~~gP~~e~v~i~~~r~~--~~~~~p~~~~~~~~~~-~gga~vlr 717 (886)
T 2qtc_A 641 EDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEKQENVYYYITTLN--ENYHMPAMPEGAEEGI-RKGIYKLE 717 (886)
T ss_dssp CCSCHHHHHTTSTTEEEECCSSHHHHHHHHHHHHHHHHSTTCCCCEEEEECCS--CCBCCCCCCTTCHHHH-HHTCEEEE
T ss_pred CCcchHHHHhhCCCCEEEecCCHHHHHHHHHHHHHhcCCCCCceEEEEEeCCc--cccCCCCCCcchhhhc-cCceEEEE
Confidence 5 6999999999999999999999999999999986 679 999777532 112 3444322 234 78999999
Q ss_pred eC----CcEEEEEeChhHHHHHHHHHHHHhc-CCCeEEEEeccccCCCHHHH
Q 021963 237 EG----SDITLVGWGAQLSIMEQACLDAEKE-GISCELIDLKTLIPWDKETV 283 (305)
Q Consensus 237 ~g----~dv~Iia~G~~~~~aleAa~~L~~~-Gi~~~vI~~~~i~P~d~~~i 283 (305)
+| .|++||++|+++++|++|++.|+++ ||+++|||++|++|||+++|
T Consensus 718 ~g~~~~~dVtLia~G~~v~~al~AAe~L~~e~GI~a~Vvd~~sl~pLD~e~i 769 (886)
T 2qtc_A 718 TIEGSKGKVQLLGSGSILRHVREAAEILAKDYGVGSDVYSVTSFTELARDGQ 769 (886)
T ss_dssp EECCSSEEEEEEECGGGHHHHHHHHHHHHHHHCEEEEEEECSCHHHHHHHHH
T ss_pred ecCCCCCCEEEEeCcHHHHHHHHHHHHHhhhhCCceEEEECCcCcccchHHH
Confidence 87 7999999999999999999999998 99999999999999999864
No 24
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=100.00 E-value=1e-34 Score=295.98 Aligned_cols=252 Identities=13% Similarity=0.137 Sum_probs=197.4
Q ss_pred ccHHHHHHHHHHHHHhcCCC-EEEEecccCCCcccccchhhHhh---------hC-C--------CcEEecchhHHHHHH
Q 021963 40 LNLYSAINQALHIALETDPR-AYVFGEDVGFGGVFRCTTGLADR---------FG-K--------SRVFNTPLCEQGIVG 100 (305)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~-iv~~~~D~~~g~~~~~~~~~~~~---------~g-p--------~r~~~~gIaE~~~v~ 100 (305)
...+.+++++|.++++++++ ++++++|+..++ .+..|.+. +. | +|||+ ||+|++|++
T Consensus 429 ~~atra~g~~L~~l~~~~p~~~vv~sADl~~Sn---~t~~f~~~t~~~~~~~~~~~P~d~~~~~~GR~i~-GI~Eh~M~g 504 (845)
T 3ahc_A 429 VEAPRALGAYCRDIIKNNPDSFRIFGPDETASN---RLNATYEVTDKQWDNGYLSGLVDEHMAVTGQVTE-QLSEHQCEG 504 (845)
T ss_dssp ECTHHHHHHHHHHHHHHSTTTEEEEESSCTTTT---TCGGGGGTCCEECCSCCCCTTTCCSEESSCSEEE-CSCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhCCCcEEEEecCCCccc---cHHHHHhhcccccccccccCCcccccCCCCcEee-eecHHHHHH
Confidence 34577889999999999999 999999987432 24555444 31 4 89999 999999999
Q ss_pred HHHHHHhCCCeEEEEecccchH---HhHHHH----HHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCCC-c--hHH
Q 021963 101 FAIGLAAMGNRAIAEIQFADYI---FPAFDQ----IVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHS-Q--SPE 170 (305)
Q Consensus 101 ~AaGlA~~G~~p~~~~~~~~F~---~ra~dq----i~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~hs-~--~d~ 170 (305)
+++|+|+.|.+||++ +|++|+ .|+++| ||++++++.|+... .++ .+|+++.+...+++|++|+ . +|+
T Consensus 505 ia~Glal~G~~~f~~-t~atFl~~~~~a~~q~akwiR~a~a~~~wr~~~-~~v-~~v~Th~si~~GeDGpTHQ~~e~~d~ 581 (845)
T 3ahc_A 505 FLEAYLLTGRHGIWS-SYESFVHVIDSMLNQHAKWLEATVREIPWRKPI-SSV-NLLVSSHVWRQDHNGFSHQDPGVTSL 581 (845)
T ss_dssp HHHHHHHTTCEEEEE-EEHHHHGGGHHHHHHHHHHHHHHHHHCTTSCCC-BCE-EEEEESCGGGCTTTCGGGCCCTHHHH
T ss_pred HHHHHHhcCCCCcee-cchhhhchhhhHHHHHHHHHHhhHHhhhhcccC-Cce-EEEEeCCceeecCCCCCCCCcHHHHH
Confidence 999999999999999 588887 799999 99885554332211 256 7888888888899888885 4 455
Q ss_pred HHHc---cCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEEeccccccccCccCCCCCCC---cccCCceEEe---ee--C-
Q 021963 171 AFFC---HVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDY---MLPLSEAEVI---RE--G- 238 (305)
Q Consensus 171 a~~~---~iP~l~V~~P~d~~e~~~~l~~a~~~~~Pv~i~~~~~l~~~~~~~~~~~~~---~~~~gk~~~~---~~--g- 238 (305)
..++ .+||+.|+.|+|+.|+..+++.|++.++|++++ .++|++.|.+++.++ .+..|++.+. ++ |
T Consensus 582 l~~~r~~~iPn~~V~~PaDanet~~a~~~al~~~~~~~v~---v~sRq~~p~~~~~~~a~~~~~~G~~v~~~as~d~~g~ 658 (845)
T 3ahc_A 582 LINKTFNNDHVTNIYFATDANMLLAISEKCFKSTNKINAI---FAGKQPAPTWVTLDEARAELEAGAAEWKWASNAENND 658 (845)
T ss_dssp HGGGCCTTCCCEEEEECCSHHHHHHHHHHHHHCBSCEEEE---ECCCSCEEECSCHHHHHHHHHHSEEECTTTCCCSSTT
T ss_pred HHHhhccCCCCeEEEeCCCHHHHHHHHHHHHHcCCCeEEE---EecCCCCCccCCchhhhhhhcCCeEEEEeecccccCC
Confidence 5555 789999999999999999999999998888884 336677777755443 4678887776 45 5
Q ss_pred -CcEEEEEeChh-HHHHHHHHHHHHhcCCCeEEEEeccc---cCCCHHHHHHHHhccCcEEEEeCCcc
Q 021963 239 -SDITLVGWGAQ-LSIMEQACLDAEKEGISCELIDLKTL---IPWDKETVEASVRKTGRLLPRSSGYW 301 (305)
Q Consensus 239 -~dv~Iia~G~~-~~~aleAa~~L~~~Gi~~~vI~~~~i---~P~d~~~i~~~~~~~~~vvvvEe~~~ 301 (305)
.|++|||+|+. +.+|++|++.|+++||+++|||+++| +|.+++.+....+.++.|+++|++..
T Consensus 659 ~~DVvLiAtGsev~~EAL~AA~~L~~~GI~vRVVsm~~lf~lqp~~~~~~~ls~~~~~~l~T~e~h~i 726 (845)
T 3ahc_A 659 EVQVVLASAGDVPTQELMAASDALNKMGIKFKVVNVVDLLKLQSRENNDEALTDEEFTELFTADKPVL 726 (845)
T ss_dssp TCSEEEEEESHHHHHHHHHHHHHHHHTTCCEEEEEECBGGGGSCTTTCTTSCCHHHHHHHHCSSSCEE
T ss_pred CCCEEEEEeccHHHHHHHHHHHHHHhCCCCEEEEEeCCCCccCCccccccccCHHHhCcEeecCCcce
Confidence 79999999965 56699999999999999999999999 67765544334455566777776653
No 25
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=99.93 E-value=8.7e-27 Score=222.87 Aligned_cols=245 Identities=16% Similarity=0.112 Sum_probs=100.5
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEecccCCCcccccchhhHh---hhCCCcEEecchhHHHHHHHHHHHHhCCCeEEEEe
Q 021963 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLAD---RFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEI 116 (305)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~g~~~~~~~~~~~---~~gp~r~~~~gIaE~~~v~~AaGlA~~G~~p~~~~ 116 (305)
++-.+|+..++.. .+.+++..-+-.+.+. ..+.|.+ ++ ..+|+++. +|++++++|.|+|+.|.||++.+
T Consensus 23 ~~GneAva~~~~~---ag~~~v~~yPgtP~t~---i~~~l~~~~~~~-g~~~i~~e-~E~~a~~~a~Gaa~aG~r~~~~t 94 (395)
T 1yd7_A 23 IQGDEAIARAAIL---AGCRFYAGYPITPASE---IFEAMALYMPLV-DGVVIQME-DEIASIAAAIGASWAGAKAMTAT 94 (395)
T ss_dssp EEHHHHHHHHHHH---HTCCEEEECCBTTTBC---HHHHHHHHGGGG-TCEEEECS-CHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eEHHHHHHHHHHH---cCCCEEEEEECcchHH---HHHHHHHhhhhc-CcEEEEeC-CHHHHHHHHHHHHHhCCcEEEEe
Confidence 4567777777665 3556666655555332 2344544 56 36899887 99999999999999999999995
Q ss_pred cccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcC--CcCCCCCCCCCCchHH--HHHccCC--CcEEEeeCCHHHH
Q 021963 117 QFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAP--YGAVGHGGHYHSQSPE--AFFCHVP--GLKVVIPRSPRQA 190 (305)
Q Consensus 117 ~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~--~g~~~~~g~~hs~~d~--a~~~~iP--~l~V~~P~d~~e~ 190 (305)
.++++.+++|||.+. +. ..+ |+|++.. ++...+.++.+.++|. +++..+| ++.++.|+|++|+
T Consensus 95 -s~~G~~~~~d~l~~a-a~--------~~~-P~Vi~~~~~~~~~~g~~~~~~~sd~~~~~~~~~g~~g~~vl~p~~~qea 163 (395)
T 1yd7_A 95 -SGPGFSLMQENIGYA-VM--------TET-PVVIVDVQRSGPSTGQPTLPAQGDIMQAIWGTHGDHSLIVLSPSTVQEA 163 (395)
T ss_dssp -ETTHHHHHTTTCC-------------CCC-CEEEEEEC--------------------------CCCCEEECCCSHHHH
T ss_pred -CchHHHHHHHHHHHH-Hh--------cCC-CEEEEEeeCCCCCCCCCcccchhHHHHHHhccCCCcceEEEeCCCHHHH
Confidence 788777899999753 32 234 6666543 3332222333334443 3445655 9999999999999
Q ss_pred HHHHHHhHh----CCCCEEEeccccccccCc----c---CCC----------C---CCCcc--cC--------Cce----
Q 021963 191 KGLLLSCIR----DPNPVVFFEPKWLYRLSV----E---EVP----------E---DDYML--PL--------SEA---- 232 (305)
Q Consensus 191 ~~~l~~a~~----~~~Pv~i~~~~~l~~~~~----~---~~~----------~---~~~~~--~~--------gk~---- 232 (305)
++++.+|++ .+.||++++++.+++... + .++ + .+|.. +. |..
T Consensus 164 ~~l~~~A~~lA~~~~~PVi~~~~~~l~h~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~ 243 (395)
T 1yd7_A 164 FDFTIRAFNLSEKYRTPVILLTDAEVGHMRERVYIPNPDEIEIINRKLPRNEEEAKLPFGDPHGDGVPPMPIFGKGYRTY 243 (395)
T ss_dssp HHHHHHHHHHHHHHTSEEEEEECHHHHHCEEEEEECCGGGSCCCCCC---------------------------------
T ss_pred HHHHHHHHHHHHHHCCCEEEEcchhHhCeeceecCCChHHhhhhcccccCCCcccccCcccCCCCCCCCCccCCCCceeE
Confidence 999999994 589999999987764421 0 010 0 01111 10 110
Q ss_pred ------------------------------------------EEeeeCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEE
Q 021963 233 ------------------------------------------EVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELI 270 (305)
Q Consensus 233 ------------------------------------------~~~~~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI 270 (305)
.+.++|.|++||++|+++..+++|++.|+++|++++||
T Consensus 244 ~~~~~h~e~g~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~g~dv~iva~G~~~~~~~eA~~~L~~~Gi~v~vi 323 (395)
T 1yd7_A 244 VTGLTHDEKGRPRTVDREVHERLIKRIVEKIEKNKKDIFTYETYELEDAEIGVVATGIVARSALRAVKMLREEGIKAGLL 323 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ecccccccccCcccCCHHHHHHHHHHHHHHHHHHHhhcCccEEecCCCCCEEEEEECccHHHHHHHHHHHHHcCCceEEE
Confidence 11236789999999999999999999999999999999
Q ss_pred EeccccCCCHHHHHHHHhccCcEEEEeCCccccC
Q 021963 271 DLKTLIPWDKETVEASVRKTGRLLPRSSGYWRFW 304 (305)
Q Consensus 271 ~~~~i~P~d~~~i~~~~~~~~~vvvvEe~~~~~~ 304 (305)
|++++||||.+.|.++++++++|+|||+|. +++
T Consensus 324 ~~r~~~Pld~~~i~~~~~~~~~vvvvEe~~-G~l 356 (395)
T 1yd7_A 324 KIETIWPFDFELIERIAERVDKLYVPEMNL-GQL 356 (395)
T ss_dssp ----------------------------------
T ss_pred EeCeecCCCHHHHHHHHhcCCEEEEEeCCc-hHH
Confidence 999999999999999999999999999996 543
No 26
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=99.85 E-value=3.2e-20 Score=198.18 Aligned_cols=210 Identities=13% Similarity=0.103 Sum_probs=154.8
Q ss_pred hhCCCcEEecchhHHHHHHHHHHHHhCCCeEEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCC
Q 021963 82 RFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHG 161 (305)
Q Consensus 82 ~~gp~r~~~~gIaE~~~v~~AaGlA~~G~~p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~ 161 (305)
.||..+.+...++|.++++++.|+|.+|.|+++.+ .++-+..+.|.+.. ++... +|+ -++...++|++.+.
T Consensus 50 ~~G~~~~v~~~esE~aA~~aaiGAa~aGaR~~t~T-s~~Gl~lm~e~l~~-~ag~~------~P~-Vi~va~R~g~~~gl 120 (1231)
T 2c42_A 50 IFGQTLTIREMQSEAGAAGAVHGALAAGALTTTFT-ASQGLLLMIPNMYK-ISGEL------LPG-VFHVTARAIAAHAL 120 (1231)
T ss_dssp TTSCCCEEEECSSHHHHHHHHHHHHHTTCCEEEEE-CHHHHHHHHHHHHH-HHHTT------CCC-EEEEEECCCCSSSB
T ss_pred hcCCceEEEecCChHHHHHHHHHHHHcCChHhhhc-cHHHHHHHHHHHHH-HhCCC------CCE-EEEECCCCccCCCC
Confidence 36767899999999999999999999999999995 77766667787753 33222 343 33334455544332
Q ss_pred CCCCCchHHHHHccCCCcEEEeeCCHHHHHHHHHHhHh----CCCCEEEeccccc-ccc--CccCCCC------------
Q 021963 162 GHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIR----DPNPVVFFEPKWL-YRL--SVEEVPE------------ 222 (305)
Q Consensus 162 g~~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a~~----~~~Pv~i~~~~~l-~~~--~~~~~~~------------ 222 (305)
+.+-.++|. +....+++.|++|+|++|+++++..|++ ++.||+++++..+ ++. +. ++++
T Consensus 121 si~~~hsd~-~~ar~~G~~vl~pss~QEa~dl~~~Af~lAek~~~PVi~~~Dg~~~sh~~~~v-ev~~~~~~~~~~~~~~ 198 (1231)
T 2c42_A 121 SIFGDHQDI-YAARQTGFAMLASSSVQEAHDMALVAHLAAIESNVPFMHFFDGFRTSHEIQKI-EVLDYADMASLVNQKA 198 (1231)
T ss_dssp CCSCCSHHH-HTTTTSSCEEEECCSHHHHHHHHHHHHHHHHHHCCCEEEEEETTTTTTCEEEE-ECCCHHHHHHTSCHHH
T ss_pred cCCCchhhH-HHHhcCCcEEEECCCHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccceeee-ecCCHHHHHhhcChhh
Confidence 333345664 4566799999999999999999999855 6999999988743 221 11 0100
Q ss_pred ----------CCCcccCCc------------------------------------------eEE-eeeCCcEEEEEeChh
Q 021963 223 ----------DDYMLPLSE------------------------------------------AEV-IREGSDITLVGWGAQ 249 (305)
Q Consensus 223 ----------~~~~~~~gk------------------------------------------~~~-~~~g~dv~Iia~G~~ 249 (305)
.+..++.|. .+. -.++.|++||++|++
T Consensus 199 ~~~~~~~~~~p~~p~~~g~a~~~~~~~~~~e~~~~~~~~~~~~v~~~~~k~~~~~g~~y~~~e~~g~~dAd~vIVa~Gs~ 278 (1231)
T 2c42_A 199 LAEFRAKSMNPEHPHVRGTAQNPDIYFQGREAANPYYLKVPGIVAEYMQKVASLTGRSYKLFDYVGAPDAERVIVSMGSS 278 (1231)
T ss_dssp HHHHHHHSCCTTSCCEESCBCCTTTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHSCCCCSEEEEECTTCSEEEEECSTH
T ss_pred hhhccccccCCCCceecCCCcCcchhhhhHhhhhhhhHhhHHHHHHHHHHHHHHhcccccceeeecCCCCCEEEEEeCHH
Confidence 001111121 121 246789999999999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHH-hccCcEEEEeCCccc
Q 021963 250 LSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASV-RKTGRLLPRSSGYWR 302 (305)
Q Consensus 250 ~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~-~~~~~vvvvEe~~~~ 302 (305)
+..+++|++.|+++|++++||++++++|||.+.|.+++ +++++|+|+|++...
T Consensus 279 ~~~~~eAv~~L~~~G~kvgvl~lr~~rPfp~~~i~~~l~~~~k~i~VvE~~~~~ 332 (1231)
T 2c42_A 279 CETIEEVINHLAAKGEKIGLIKVRLYRPFVSEAFFAALPASAKVITVLDRTKEP 332 (1231)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEESEEESCCHHHHHHTSCTTCCEEEEEESSCCT
T ss_pred HHHHHHHHHHHHhcCCceEEEEEEEeCCCCHHHHHHHHHhcCCEEEEEECCCCC
Confidence 99999999999999999999999999999999999998 677999999998443
No 27
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=99.55 E-value=5.6e-15 Score=117.87 Aligned_cols=67 Identities=30% Similarity=0.450 Sum_probs=63.6
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccCcEEEEeCCcccc
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLPRSSGYWRF 303 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvEe~~~~~ 303 (305)
+|.|++||++|+++..|++|++.|+++|++++|+++++++|||.+.|.++++++++|+|+|+|..++
T Consensus 12 ~g~dv~iv~~Gs~~~~a~eA~~~L~~~Gi~v~vi~~r~~~P~d~~~l~~~~~~~~~vvvvE~~~~G~ 78 (118)
T 3ju3_A 12 KEADITFVTWGSQKGPILDVIEDLKEEGISANLLYLKMFSPFPTEFVKNVLSSANLVIDVESNYTAQ 78 (118)
T ss_dssp SSCSEEEEEEGGGHHHHHHHHHHHHHTTCCEEEEEECSSCSCCHHHHHHHHTTCSCCCCCCCCCCCC
T ss_pred CCCCEEEEEECccHHHHHHHHHHHHHCCCceEEEEECeEecCCHHHHHHHHcCCCEEEEEECCCCCc
Confidence 5789999999999999999999999999999999999999999999999999999999999997554
No 28
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=96.28 E-value=0.089 Score=51.50 Aligned_cols=116 Identities=15% Similarity=0.091 Sum_probs=73.5
Q ss_pred CcEEecchhHHHHHHHHHHHHhC-CCeEEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcC--CCCCC
Q 021963 86 SRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA--VGHGG 162 (305)
Q Consensus 86 ~r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~--~~~~g 162 (305)
=|++.+ ..|+++.-+|-|.|.. |...++..|+++-..-++.-|.+ +... .+ |++++...-+ .-+.+
T Consensus 42 i~~i~~-~~E~~Aa~~A~GyAr~tg~~~v~~~TsGpG~~N~~~gi~~-A~~~--------~v-Pvl~itg~~~~~~~~~~ 110 (549)
T 3eya_A 42 IEWMST-RHEEVAAFAAGAEAQLSGELAVCAGSCGPGNLHLINGLFD-CHRN--------HV-PVLAIAAHIPSSEIGSG 110 (549)
T ss_dssp SEEEEC-SSHHHHHHHHHHHHHHHSSCEEEEECTTHHHHTTHHHHHH-HHHT--------TC-CEEEEEEESCGGGTTSC
T ss_pred CeEEEe-CChHHHHHHHHHHHHHhCCCEEEEeCCCCcHhhhHHHHHH-HHhh--------CC-CEEEEeCCCchhhcCCC
Confidence 367665 7999999999999997 65545444688766555555552 2222 23 5555432111 12234
Q ss_pred CCCCchHHHHHccCCCcEEEeeCCHHHHHHHHHHhHh----CCCCEEEecccccc
Q 021963 163 HYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIR----DPNPVVFFEPKWLY 213 (305)
Q Consensus 163 ~~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a~~----~~~Pv~i~~~~~l~ 213 (305)
..|......+++.+-.. .....+++++...++.|++ .++||+|-.|..+.
T Consensus 111 ~~Q~~d~~~~~~~~tk~-~~~v~~~~~~~~~i~~A~~~A~~~~GPV~l~iP~dv~ 164 (549)
T 3eya_A 111 YFQETHPQELFRECSHY-CELVSSPEQIPQVLAIAMRKAVLNRGVSVVVLPGDVA 164 (549)
T ss_dssp CTTCCCHHHHTSTTCSE-EEECCSGGGHHHHHHHHHHHHHHTTSEEEEEEEHHHH
T ss_pred CCCccCHHHHHhhhhhe-EEEeCCHHHHHHHHHHHHHHHhhCCCCEEEEeChhHh
Confidence 44445667888888664 4555667777766666665 58999998776643
No 29
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=95.70 E-value=0.046 Score=54.12 Aligned_cols=115 Identities=10% Similarity=-0.023 Sum_probs=75.3
Q ss_pred cEEecchhHHHHHHHHHHHHhCCCe-EEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEc-CC-cCCCCCCC
Q 021963 87 RVFNTPLCEQGIVGFAIGLAAMGNR-AIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRA-PY-GAVGHGGH 163 (305)
Q Consensus 87 r~~~~gIaE~~~v~~AaGlA~~G~~-p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~-~~-g~~~~~g~ 163 (305)
|++-+ ..|+++..+|.|.|...-+ .++..|+++.+.-++.-+.+ +.+. .+ |++++. .. ...-+.+.
T Consensus 45 ~~i~~-~~E~~Aa~~A~GyAr~tgk~~v~~~tsGpG~~N~~~gl~~-A~~~--------~v-Pll~Itg~~p~~~~g~~~ 113 (590)
T 1v5e_A 45 KFLQV-KHEEVGAMAAVMQSKFGGNLGVTVGSGGPGASHLINGLYD-AAMD--------NI-PVVAILGSRPQRELNMDA 113 (590)
T ss_dssp EEEEC-SSHHHHHHHHHHHHHTTCCCCEEEECTTHHHHTTHHHHHH-HHHH--------TC-CEEEEEEECCGGGTTTTC
T ss_pred eEEee-CCHHHHHHHHHHHHHHHCCCEEEEeCcChHHHHHHHHHHH-HHhc--------CC-CEEEEcCCCCcccCCCCc
Confidence 55554 8999999999999998444 44444677776666666653 3222 23 555442 21 11112233
Q ss_pred CCCchHHHHHccCCCcEEEeeCCHHHHHHHHHHhHh----C-CCCEEEeccccccc
Q 021963 164 YHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIR----D-PNPVVFFEPKWLYR 214 (305)
Q Consensus 164 ~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a~~----~-~~Pv~i~~~~~l~~ 214 (305)
++..+...+++.+-.. .+.+.+++++..+++.|++ . ++||+| .|.++..
T Consensus 114 ~Q~~d~~~~~~~~tk~-~~~v~~~~~~~~~i~~A~~~A~~~~~GPV~l-iP~dv~~ 167 (590)
T 1v5e_A 114 FQELNQNPMYDHIAVY-NRRVAYAEQLPKLVDEAARMAIAKRGVAVLE-VPGDFAK 167 (590)
T ss_dssp TTCCCCHHHHHTTCSE-EEECCSGGGHHHHHHHHHHHHHHTTSEEEEE-EETTGGG
T ss_pred ccccCHHHHHHhhccE-EEEeCCHHHHHHHHHHHHHHHhcCCCceEEE-Eccchhh
Confidence 3334556888988765 7778888888888888886 2 499999 9988753
No 30
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=95.35 E-value=0.17 Score=49.74 Aligned_cols=154 Identities=11% Similarity=0.030 Sum_probs=88.8
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEecccCCCcccccchhhHhhhCCCcEEecchhHHHHHHHHHHHHhC-CCeEEEEecc
Q 021963 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQF 118 (305)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~g~~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~~~~ 118 (305)
++..+++.+.|.+..- +.++.+-++-. ....+.+.+ - .=|++.+ ..|+++..+|.|.|.. |...++.+|+
T Consensus 11 ~~~a~~l~~~L~~~GV--~~vfg~PG~~~----~~l~~al~~-~-~i~~v~~-~~E~~Aa~~A~Gyar~tg~p~v~~~Ts 81 (566)
T 1ozh_A 11 AHGADLVVSQLEAQGV--RQVFGIPGAKI----DKVFDSLLD-S-SIRIIPV-RHEANAAFMAAAVGRITGKAGVALVTS 81 (566)
T ss_dssp SCHHHHHHHHHHHHTC--CEEEEECCTTT----HHHHHHGGG-S-SSEEEEC-SSHHHHHHHHHHHHHHHSSCEEEEECS
T ss_pred CcHHHHHHHHHHHCCC--CEEEEcCCCch----HHHHHHHHh-C-CCcEEEe-CCHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 3445666666655432 34554433321 112334433 2 2467666 8999999999999996 6554555567
Q ss_pred cchHHhHHHHHHHHHhhcccccCCCcccceeEEEc-CCcC-CCCCCCCCCchHHHHHccCCCcEEEeeCCHHHHHHHHHH
Q 021963 119 ADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRA-PYGA-VGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLS 196 (305)
Q Consensus 119 ~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~-~~g~-~~~~g~~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~ 196 (305)
++-..-++.-+.+ +-+. .+ |+|++. .... ..+.+.+|..+..++++.+... .+...+++++...++.
T Consensus 82 GpG~~N~~~~l~~-A~~~--------~v-Pll~itg~~~~~~~~~~~~Q~~d~~~~~~~~tk~-~~~v~~~~~~~~~i~~ 150 (566)
T 1ozh_A 82 GPGCSNLITGMAT-ANSE--------GD-PVVALGGAVKRADKAKQVHQSMDTVAMFSPVTKY-AIEVTAPDALAEVVSN 150 (566)
T ss_dssp THHHHTTHHHHHH-HHHH--------TC-CEEEEEEECCTTTC------CCCHHHHHGGGCSE-EEECCSGGGHHHHHHH
T ss_pred ChHHHHHHHHHHH-HHhc--------CC-CEEEEeCCCccccCCCCcccccCHHHHHHHHhhe-EEEcCCHHHHHHHHHH
Confidence 8766555555542 2222 23 555542 2111 1122344455667889988765 5566777778777777
Q ss_pred hHh----C-CCCEEEecccccc
Q 021963 197 CIR----D-PNPVVFFEPKWLY 213 (305)
Q Consensus 197 a~~----~-~~Pv~i~~~~~l~ 213 (305)
|++ . ++||+|-.|..+.
T Consensus 151 A~~~A~~~r~GPV~l~iP~dv~ 172 (566)
T 1ozh_A 151 AFRAAEQGRPGSAFVSLPQDVV 172 (566)
T ss_dssp HHHHHHSSSCCEEEEEEEHHHH
T ss_pred HHHHHhcCCCCeEEEEeChhhh
Confidence 765 2 5999998887653
No 31
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=95.21 E-value=0.12 Score=51.08 Aligned_cols=115 Identities=15% Similarity=0.017 Sum_probs=76.1
Q ss_pred CcEEecchhHHHHHHHHHHHHhC-CCeEEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEc-CC-cCCCCCC
Q 021963 86 SRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRA-PY-GAVGHGG 162 (305)
Q Consensus 86 ~r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~-~~-g~~~~~g 162 (305)
=|++.+ ..|+++..+|.|.|.. |...++..++++-..-++--+.+ +... .+ ||+++. .. -..-+.+
T Consensus 51 i~~i~~-~~E~~Aa~~A~Gyar~tg~p~v~~~TsGpG~~N~~~gv~~-A~~~--------~v-Pll~itg~~~~~~~g~~ 119 (590)
T 1ybh_A 51 IRNVLP-RHEQGGVFAAEGYARSSGKPGICIATSGPGATNLVSGLAD-ALLD--------SV-PLVAITGQVPRRMIGTD 119 (590)
T ss_dssp CEECCC-SSHHHHHHHHHHHHHHHSSCEEEEECTTHHHHTTHHHHHH-HHHH--------TC-CEEEEEEECCGGGTTTT
T ss_pred ccEEee-CCHHHHHHHHHHHHHHHCCCEEEEeccCchHHHHHHHHHH-HHhh--------CC-CEEEEeCcCCccccCCC
Confidence 366555 7999999999999997 66555555677766555555542 2222 23 555442 21 1112234
Q ss_pred CCCCchHHHHHccCCCcEEEeeCCHHHHHHHHHHhHhC-----CCCEEEeccccc
Q 021963 163 HYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRD-----PNPVVFFEPKWL 212 (305)
Q Consensus 163 ~~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a~~~-----~~Pv~i~~~~~l 212 (305)
.++..+..++++.+-.. .+...+++++..+++.|++. ++||+|-.|..+
T Consensus 120 ~~Q~~d~~~~~~~~~k~-~~~v~~~~~i~~~l~~A~~~a~~~~~GPV~l~iP~dv 173 (590)
T 1ybh_A 120 AFQETPIVEVTRSITKH-NYLVMDVEDIPRIIEEAFFLATSGRPGPVLVDVPKDI 173 (590)
T ss_dssp CTTCCCHHHHHGGGSSE-EEECCCGGGHHHHHHHHHHHHHSSSCCEEEEEEEHHH
T ss_pred cccccCHHHHHHHHhCe-EEecCCHHHHHHHHHHHHHHHhhCCCceEEEEeCcch
Confidence 44445667888988765 56677888999999988872 699999877765
No 32
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=95.00 E-value=0.15 Score=50.26 Aligned_cols=153 Identities=12% Similarity=-0.049 Sum_probs=92.2
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEecccCCCcccccchhhHhhhCCCcEEecchhHHHHHHHHHHHHhC-CCeEEEEecc
Q 021963 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQF 118 (305)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~g~~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~~~~ 118 (305)
++..+++.+.|.+.. -+.++.+-++-.... ..+.+. + =|++.+ ..|+++.-+|-|+|.. |...++..|+
T Consensus 12 ~~~a~~l~~~L~~~G--V~~vfg~PG~~~~~~---l~~al~---~-i~~i~~-~~E~~Aa~~A~Gyar~tg~p~v~~~Ts 81 (573)
T 2iht_A 12 PTAAHALLSRLRDHG--VGKVFGVVGREAASI---LFDEVE---G-IDFVLT-RHEFTAGVAADVLARITGRPQACWATL 81 (573)
T ss_dssp CCHHHHHHHHHHHTT--CCEEEECCCGGGGTC---CSCSST---T-CEEEEC-SSHHHHHHHHHHHHHHHCSCEEEEECT
T ss_pred ccHHHHHHHHHHHCC--CCEEEEecCCcchhH---HHHHHc---C-CeEEee-CCHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 556666666665533 234554433320111 234443 2 467665 7999999999999997 5444444467
Q ss_pred cchHHhHHHHHHHHHhhcccccCCCcccceeEEEc-CCc-CCCCC-CCCCCchHHHHHccCCCcEEEeeCCHHHHHHHHH
Q 021963 119 ADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRA-PYG-AVGHG-GHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLL 195 (305)
Q Consensus 119 ~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~-~~g-~~~~~-g~~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~ 195 (305)
++-..-++.-+.+ +.+. .+ |++++. ... ..-+. +.+|..+..++++.+... .+...+++++...++
T Consensus 82 GpG~~N~~~~v~~-A~~~--------~~-Pll~itg~~~~~~~~~~~~~Q~~d~~~~~~~~~k~-~~~v~~~~~~~~~i~ 150 (573)
T 2iht_A 82 GPGMTNLSTGIAT-SVLD--------RS-PVIALAAQSESHDIFPNDTHQCLDSVAIVAPMSKY-AVELQRPHEITDLVD 150 (573)
T ss_dssp THHHHHHHHHHHH-HHHH--------TC-CEEEEEEESCGGGCCTTTSTTCCCHHHHHGGGSSE-EEECCSGGGHHHHHH
T ss_pred CchHHHHHHHHHH-HHhh--------CC-CEEEEcccCcccccCCcCccccCCHHHHHHhHhhE-EEEcCCHHHHHHHHH
Confidence 7766566665553 3222 23 555442 211 11223 456667777899988765 556677777888888
Q ss_pred HhHh----C-CCCEEEecccccc
Q 021963 196 SCIR----D-PNPVVFFEPKWLY 213 (305)
Q Consensus 196 ~a~~----~-~~Pv~i~~~~~l~ 213 (305)
.|++ . ++||+|-.|..+.
T Consensus 151 ~A~~~A~~~~~GPV~l~iP~dv~ 173 (573)
T 2iht_A 151 SAVNAAMTEPVGPSFISLPVDLL 173 (573)
T ss_dssp HHHHHHTBSSCCCEEEEEEHHHH
T ss_pred HHHHHHhcCCCceEEEEecchHh
Confidence 7776 2 5999998887753
No 33
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=94.86 E-value=0.17 Score=49.71 Aligned_cols=152 Identities=13% Similarity=0.011 Sum_probs=92.4
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEecccCCCcccccchhhHhhhCCCcEEecchhHHHHHHHHHHHHhC-CCeEEEEecc
Q 021963 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQF 118 (305)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~g~~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~~~~ 118 (305)
++..+++.+.|.+..- +.++.+-++-. ....+.+.+ . +=|++.+ ..|+++..+|.|.|.. |...++.+++
T Consensus 4 ~~~a~~l~~~L~~~GV--~~vfg~PG~~~----~~l~~al~~-~-~i~~i~~-~~E~~Aa~~A~Gyar~tg~p~v~~~Ts 74 (563)
T 2uz1_A 4 ITGGELVVRTLIKAGV--EHLFGLHGAHI----DTIFQACLD-H-DVPIIDT-RHEAAAGHAAEGYARAGAKLGVALVTA 74 (563)
T ss_dssp EEHHHHHHHHHHHHTC--CCEEECCCGGG----HHHHHHHHH-H-TCCEEEC-SSHHHHHHHHHHHHHHHTSCEEEEECT
T ss_pred cCHHHHHHHHHHHCCC--CEEEECCCCch----HHHHHHHHh-c-CCcEEee-CCHHHHHHHHHHHHHHhCCCEEEEEcc
Confidence 4556666666665532 34554433311 112344433 3 3577776 7999999999999997 6555555568
Q ss_pred cchHHhHHHHHHHHHhhcccccCCCcccceeEEEc-CCc-CCCCCCCCCC-chHHHHHccCCCcEEEeeCCHHHHHHHHH
Q 021963 119 ADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRA-PYG-AVGHGGHYHS-QSPEAFFCHVPGLKVVIPRSPRQAKGLLL 195 (305)
Q Consensus 119 ~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~-~~g-~~~~~g~~hs-~~d~a~~~~iP~l~V~~P~d~~e~~~~l~ 195 (305)
++-..-++.-+.+ + +.. .+ |++++. ... ...+.+.++. .+..++++.+-.. .+...+++++...++
T Consensus 75 GpG~~N~~~~l~~-A-~~~-------~~-Pll~itg~~~~~~~~~~~~Q~~~d~~~~~~~~tk~-~~~v~~~~~~~~~l~ 143 (563)
T 2uz1_A 75 GGGFTNAVTPIAN-A-WLD-------RT-PVLFLTGSGALRDDETNTLQAGIDQVAMAAPITKW-AHRVMATEHIPRLVM 143 (563)
T ss_dssp THHHHTTHHHHHH-H-HHH-------TC-CEEEEEEECCGGGTTSCCTTCCCCHHHHHGGGCSE-EEECCCGGGHHHHHH
T ss_pred CccHHHHHHHHHH-H-Hhc-------CC-CEEEEeCCCCcccCCchhhhhhccHHHHhhhhhce-EEEcCCHHHHHHHHH
Confidence 7766566555553 2 221 23 555442 211 1122344555 5567889988764 566677888888888
Q ss_pred HhHh-----CCCCEEEecccc
Q 021963 196 SCIR-----DPNPVVFFEPKW 211 (305)
Q Consensus 196 ~a~~-----~~~Pv~i~~~~~ 211 (305)
.|++ .++||+|-.|..
T Consensus 144 ~A~~~a~~~~~GPV~l~iP~d 164 (563)
T 2uz1_A 144 QAIRAALSAPRGPVLLDLPWD 164 (563)
T ss_dssp HHHHHHHSSSCCCEEEEEEHH
T ss_pred HHHHHhcCCCCceEEEEeCHH
Confidence 7776 259999988876
No 34
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=94.46 E-value=0.66 Score=45.47 Aligned_cols=160 Identities=14% Similarity=0.101 Sum_probs=86.8
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCEEEEecccCCCcccccchhhHhhhCCCcEEecchhHHHHHHHHHHHHhC-CCeEEEE
Q 021963 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAE 115 (305)
Q Consensus 37 ~~~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~g~~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~ 115 (305)
..+++..+++.+.|.+..- +.++.+-++-. ....+.+.+ . +.+.+=....|+++.-+|.|.|.. |...++.
T Consensus 18 ~~~~~~a~~lv~~L~~~GV--~~vfg~PG~~~----~~l~~al~~-~-~~~~~i~~~~E~~Aa~~A~GyAr~tgkp~v~~ 89 (565)
T 2nxw_A 18 GSHMKLAEALLRALKDRGA--QAMFGIPGDFA----LPFFKVAEE-T-QILPLHTLSHEPAVGFAADAAARYSSTLGVAA 89 (565)
T ss_dssp SCCCBHHHHHHHHHHHTTC--CCEEECCCGGG----HHHHHHHHH-H-CSSCEEECSSHHHHHHHHHHHHHHHTSCEEEE
T ss_pred CCCcCHHHHHHHHHHHcCC--CEEEECCCcch----HHHHHHHHh-C-CCcEEEecCcHHHHHHHHHHHHHHhCCCeEEE
Confidence 4556777777776665432 34554433311 112344443 3 443334458999999999999997 6555555
Q ss_pred ecccchHHhHHHHHHHHHhhcccccCCCcccceeEEE-cCCcC--CCCCC-CCCC-c--h-HHHHHccCCCcEEEeeCCH
Q 021963 116 IQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVR-APYGA--VGHGG-HYHS-Q--S-PEAFFCHVPGLKVVIPRSP 187 (305)
Q Consensus 116 ~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~-~~~g~--~~~~g-~~hs-~--~-d~a~~~~iP~l~V~~P~d~ 187 (305)
+|+++-..-++.-+.+ +.+. .+ ||+++ +.... .+.+. .||+ | + ...+++.+-.. .+...++
T Consensus 90 ~TsGpG~~N~~~gv~~-A~~~--------~v-Pll~itg~~~~~~~~~~~~~~~~~q~~d~q~~~~~~~~k~-~~~v~~~ 158 (565)
T 2nxw_A 90 VTYGAGAFNMVNAVAG-AYAE--------KS-PVVVISGAPGTTEGNAGLLLHHQGRTLDTQFQVFKEITVA-QARLDDP 158 (565)
T ss_dssp ECTTHHHHTTHHHHHH-HHHT--------TC-CEEEEEEECCTTCC--CCCC-------CHHHHHHTTSCSC-EEECCCT
T ss_pred ECCCCCHHHHHHHHHH-HHhh--------CC-CEEEEeCCCChhhhccCcceeeeccchhhHHHHHHhhheE-EEEeCCH
Confidence 5677766555555542 2222 23 55544 22111 12222 2453 2 2 35788887654 3444555
Q ss_pred HHHHHHHHHhHh----CCCCEEEecccccccc
Q 021963 188 RQAKGLLLSCIR----DPNPVVFFEPKWLYRL 215 (305)
Q Consensus 188 ~e~~~~l~~a~~----~~~Pv~i~~~~~l~~~ 215 (305)
+++...++.|++ .++||+|-.|+.+.+.
T Consensus 159 ~~~~~~i~~A~~~A~~~~GPV~l~iP~Dv~~~ 190 (565)
T 2nxw_A 159 AKAPAEIARVLGAARAQSRPVYLEIPRNMVNA 190 (565)
T ss_dssp TTHHHHHHHHHHHHHHHTCCEEEEEEGGGTTC
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEECChhhhcC
Confidence 555555555554 4799999888766443
No 35
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=94.11 E-value=0.54 Score=46.05 Aligned_cols=115 Identities=17% Similarity=0.060 Sum_probs=69.6
Q ss_pred CcEEecchhHHHHHHHHHHHHhC-CCeEEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEc-CCcC--CCCC
Q 021963 86 SRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRA-PYGA--VGHG 161 (305)
Q Consensus 86 ~r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~-~~g~--~~~~ 161 (305)
=|++.+ ..|+++..+|.|.|.. | ..++..++++-..-++.-+.+ + +.. .+ |++++. .... .+.+
T Consensus 42 i~~v~~-~~E~~Aa~~A~Gyar~tg-~~v~~~TsGpG~~N~~~gia~-A-~~~-------~v-Pll~itg~~~~~~~~~~ 109 (566)
T 2vbi_A 42 MKQIYC-CNELNCGFSAEGYARSNG-AAAAVVTFSVGAISAMNALGG-A-YAE-------NL-PVILISGAPNSNDQGTG 109 (566)
T ss_dssp SEEEEC-SSHHHHHHHHHHHHHHHS-CEEEEECTTTTHHHHHHHHHH-H-HHT-------TC-CEEEEEEECCGGGTTTT
T ss_pred CeEEee-CcHHHHHHHHHHHHhhcC-CeEEEEeCCCCHHHHHHHHHH-H-Hhh-------CC-CEEEEECCCChHHhccC
Confidence 366665 7999999999999986 8 655555778766556555553 2 221 23 555442 2111 1222
Q ss_pred C-CCCC----c--hHHHHHccCCCcEEEeeCCHHHHHHHHHHhHh----CCCCEEEecccccc
Q 021963 162 G-HYHS----Q--SPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIR----DPNPVVFFEPKWLY 213 (305)
Q Consensus 162 g-~~hs----~--~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a~~----~~~Pv~i~~~~~l~ 213 (305)
. .||. + +...+++.+-.. .+.+.+++++...++.|+. .++||+|-.|..+.
T Consensus 110 ~~~~~~~g~~~~~d~~~~~~~~tk~-~~~v~~~~~~~~~l~~A~~~a~~~~GPV~l~iP~d~~ 171 (566)
T 2vbi_A 110 HILHHTIGKTDYSYQLEMARQVTCA-AESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIA 171 (566)
T ss_dssp CBCTTSCSSSCCTHHHHHHHTTCSE-EEEECSSSSHHHHHHHHHHHHHHHTCCEEEEEETTTT
T ss_pred ceeeeeccCcchHHHHHHHhhhEeE-EEEeCCHHHHHHHHHHHHHHHHhCCCCEEEEechhhc
Confidence 1 2442 1 236888888654 4455555555555555554 47999998877653
No 36
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=94.10 E-value=0.32 Score=48.18 Aligned_cols=158 Identities=10% Similarity=-0.039 Sum_probs=86.4
Q ss_pred CcccHHHHHHHHHHHHHhcCCCEEEEecccCCCcccccchhhHhhhCCCcEEecchhHHHHHHHHHHHHhC-CCeEEEEe
Q 021963 38 KSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEI 116 (305)
Q Consensus 38 ~~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~g~~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~~ 116 (305)
.+++..+++.+.|.+.. -+.++.+-++-. ....+.|.+.-+.=|++.+ ..|+++.-+|-|.|.. |...++..
T Consensus 9 ~~~~~a~~l~~~L~~~G--V~~vfg~PG~~~----~~l~dal~~~~~~i~~i~~-~hE~~Aa~aA~GyAr~tg~~gv~~~ 81 (603)
T 4feg_A 9 TNILAGAAVIKVLEAWG--VDHLYGIPGGSI----NSIMDALSAERDRIHYIQV-RHEEVGAMAAAADAKLTGKIGVCFG 81 (603)
T ss_dssp CEEEHHHHHHHHHHHTT--CCEEEECCCGGG----HHHHHHHHHTTTTSEEEEC-SSHHHHHHHHHHHHHHHSSCEEEEE
T ss_pred CeeeHHHHHHHHHHHCC--CCEEEEeCCCch----HHHHHHHHhccCCCeEEEe-cChHHHHHHHHHHHHHhCCceEEEe
Confidence 34566666666655433 233444333211 1123445432111367665 7999999999999986 65555544
Q ss_pred cccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCC--CCCCCCCchHHHHHccCCCcEEEeeCCHHHHHHHH
Q 021963 117 QFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVG--HGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLL 194 (305)
Q Consensus 117 ~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~--~~g~~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l 194 (305)
|+++-..-++.-|.+ +.+. .+ ||+++...-+.. +.+..+..+...+++.+-.. .....+++++...+
T Consensus 82 TsGpG~~N~~~gia~-A~~~--------~v-Pvl~itG~~~~~~~~~~~~Q~~d~~~~~~~~tk~-~~~v~~~~~~~~~i 150 (603)
T 4feg_A 82 SAGPGGTHLMNGLYD-ARED--------HV-PVLALIGQFGTTGMNMDTFQEMNENPIYADVADY-NVTAVNAATLPHVI 150 (603)
T ss_dssp CTTHHHHTTHHHHHH-HHHT--------TC-CEEEEEEECCTTTTTSCCTTCCCCGGGGTTTCSE-EEECCCSTTHHHHH
T ss_pred cCCchHHHHHHHHHH-HHHc--------CC-CEEEEecCCcccccCCCccccccHHHHhhhhceE-EEEcCCHHHHHHHH
Confidence 688876555555542 2222 23 555543211111 22333334456788877654 33344555555555
Q ss_pred HHhHh----CCCCEEEecccccc
Q 021963 195 LSCIR----DPNPVVFFEPKWLY 213 (305)
Q Consensus 195 ~~a~~----~~~Pv~i~~~~~l~ 213 (305)
+.|++ .++||+|-.|..+.
T Consensus 151 ~~A~~~A~~~~GPV~l~iP~dv~ 173 (603)
T 4feg_A 151 DEAIRRAYAHQGVAVVQIPVDLP 173 (603)
T ss_dssp HHHHHHHHHHTSEEEEEEETTGG
T ss_pred HHHHHHHhcCCCCEEEEeChhhh
Confidence 55554 58999998777653
No 37
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=94.08 E-value=0.56 Score=45.95 Aligned_cols=115 Identities=17% Similarity=0.088 Sum_probs=71.6
Q ss_pred CcEEecchhHHHHHHHHHHHHhC-CCeEEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEc-CCcC--CCCC
Q 021963 86 SRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRA-PYGA--VGHG 161 (305)
Q Consensus 86 ~r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~-~~g~--~~~~ 161 (305)
=|++.+ ..|+++..+|.|.|.. | ..++..|+++-..-++.-+.+ + +.. .+ ||+++. .... .+.+
T Consensus 42 i~~i~~-~~E~~Aa~~A~Gyar~tg-~~v~~~TsGpG~~N~~~gia~-A-~~~-------~v-Pll~itg~~~~~~~~~~ 109 (568)
T 2wvg_A 42 MEQVYC-CNELNCGFSAEGYARAKG-AAAAVVTYSVGALSAFDAIGG-A-YAE-------NL-PVILISGAPNNNDHAAG 109 (568)
T ss_dssp SEEEEC-SSHHHHHHHHHHHHHHHS-CEEEEECTTTTHHHHHHHHHH-H-HHT-------TC-CEEEEEEECCGGGTTTT
T ss_pred ceEecc-CcHHHHHHHHHHHHHhhC-CeEEEEeCCCCHHHHHHHHHH-H-hhh-------CC-CEEEEeCCCChhHhccC
Confidence 367666 8999999999999976 8 555444688766556555553 2 222 23 555442 2111 1222
Q ss_pred C-CCCC----c--hHHHHHccCCCcEEEeeCCHHHHHHHHHHhHh----CCCCEEEecccccc
Q 021963 162 G-HYHS----Q--SPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIR----DPNPVVFFEPKWLY 213 (305)
Q Consensus 162 g-~~hs----~--~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a~~----~~~Pv~i~~~~~l~ 213 (305)
. .||. + +...+++.+-.. .+...+++++...++.|++ .++||+|-.|..+.
T Consensus 110 ~~~~~~~g~~~~~d~~~~~~~~tk~-~~~v~~~~~~~~~l~~A~~~A~~~~GPV~l~iP~dv~ 171 (568)
T 2wvg_A 110 HVLHHALGKTDYHYQLEMAKNITAA-AEAIYTPEEAPAKIDHVIKTALREKKPVYLEIACNIA 171 (568)
T ss_dssp CBCTTSCSSSCCCHHHHHHTTSCSC-EEEECSGGGHHHHHHHHHHHHHHHTCCEEEEEEGGGT
T ss_pred cceeeeccccchHHHHHHHHhhEeE-EEEeCCHHHHHHHHHHHHHHHHhCCCCEEEEechhHh
Confidence 1 2442 2 346889888765 4555667776666666665 47999998887653
No 38
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=93.86 E-value=0.85 Score=44.55 Aligned_cols=114 Identities=13% Similarity=0.114 Sum_probs=71.6
Q ss_pred cEEecchhHHHHHHHHHHHHhC-CCeEEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcC--CCCCCC
Q 021963 87 RVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA--VGHGGH 163 (305)
Q Consensus 87 r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~--~~~~g~ 163 (305)
|++- ...|+++.-+|-|.|.. |...++..|+++-..-++--|.+ +.+. .+ ||+++...-+ .-+.+.
T Consensus 48 ~~i~-~~hE~~Aa~~AdGyAr~tG~pgv~~~TsGpG~~N~~~gia~-A~~d--------~v-Pll~itG~~~~~~~g~~~ 116 (556)
T 3hww_A 48 IHHT-HFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIE-AGLT--------GE-KLILLTADRPPELIDCGA 116 (556)
T ss_dssp EEEE-CSCHHHHHHHHHHHHHHHCSCEEEEECSSHHHHTTHHHHHH-HHHH--------CC-CEEEEEEECCGGGSSSSC
T ss_pred eEEE-ecCCcHHHHHHHHHHHhhCCCEEEEECCCcHHHhhhHHHHH-HHHh--------CC-CeEEEeCCCCHHHhccCC
Confidence 6665 46999999999999986 76555555788876555555542 2222 23 6665432111 122334
Q ss_pred CCCchHHHHHccCCCcEEE--eeCC---HHHHHHHHHHhHhC--CCCEEEecccc
Q 021963 164 YHSQSPEAFFCHVPGLKVV--IPRS---PRQAKGLLLSCIRD--PNPVVFFEPKW 211 (305)
Q Consensus 164 ~hs~~d~a~~~~iP~l~V~--~P~d---~~e~~~~l~~a~~~--~~Pv~i~~~~~ 211 (305)
+|..+..++++.+-....- .|.+ ++++..+++.|+.. ++||+|-.|+.
T Consensus 117 ~Q~~d~~~~~~~~tk~~~~v~~~~~~~~~~~i~~~i~~A~~~~r~GPV~i~iP~d 171 (556)
T 3hww_A 117 NQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLHAGGVHINCPFA 171 (556)
T ss_dssp TTCCCCTTTTTTCSSEEEECCCCCTTSCHHHHHHHHHHHHHSCCSSCEEEEEECC
T ss_pred CccccHHHHHhhheeEEEecCCCcccccHHHHHHHHHHHHhcCCCCCEEEeCCcC
Confidence 5555556788877655433 3432 45688899999864 69999977764
No 39
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=93.74 E-value=0.19 Score=48.87 Aligned_cols=116 Identities=20% Similarity=0.123 Sum_probs=71.7
Q ss_pred CcEEecchhHHHHHHHHHHHHhC-CCeEEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcC---CCCC
Q 021963 86 SRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA---VGHG 161 (305)
Q Consensus 86 ~r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~---~~~~ 161 (305)
=|++.+ ..|+++..+|.|.|.. |...++.++.++-+.-++.-+.+ + +.. .+ |++++...-+ .+.+
T Consensus 39 i~~i~~-~~E~~Aa~~A~Gyar~tg~~~v~~~tsGpG~~N~~~~l~~-A-~~~-------~~-Pll~itg~~~~~~~~~~ 107 (528)
T 1q6z_A 39 FRYILA-LQEACVVGIADGYAQASRKPAFINLHSAAGTGNAMGALSN-A-WNS-------HS-PLIVTAGQQTRAMIGVE 107 (528)
T ss_dssp CEEEEC-SSHHHHHHHHHHHHHHHTSCEEEEEEHHHHHHHTHHHHHH-H-HHT-------TC-CEEEEEEECCHHHHTTT
T ss_pred CcEEEE-CcHHHHHHHHHHHHHHhCCCEEEEEcCChHHHHHHHHHHH-H-hhc-------CC-CEEEEeCCCcccccCCC
Confidence 366655 7999999999999997 66555544566766556565553 2 221 23 5554421111 1222
Q ss_pred CCCCCchHHHHHccCCCcEEEeeCCHHHHHHHHHHhHh-----CCCCEEEecccccc
Q 021963 162 GHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIR-----DPNPVVFFEPKWLY 213 (305)
Q Consensus 162 g~~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a~~-----~~~Pv~i~~~~~l~ 213 (305)
..+|..+...+++.+... ...+.+++++...++.|+. .++||+|-.|..+.
T Consensus 108 ~~q~~~d~~~~~~~~~k~-~~~v~~~~~~~~~i~~A~~~a~~~~~GPV~l~iP~d~~ 163 (528)
T 1q6z_A 108 ALLTNVDAANLPRPLVKW-SYEPASAAEVPHAMSRAIHMASMAPQGPVYLSVPYDDW 163 (528)
T ss_dssp CTTCCTTGGGSSTTSCSC-EECCSSGGGHHHHHHHHHHHHHSSSCCCEEEEEEGGGT
T ss_pred cccccccHHHHHHHhhHh-hhcCCCHHHHHHHHHHHHHHHhcCCCCcEEEEechhhh
Confidence 223323556777877665 4556677777777777765 26899998877653
No 40
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=93.71 E-value=0.34 Score=48.81 Aligned_cols=114 Identities=14% Similarity=0.063 Sum_probs=74.3
Q ss_pred cEEecchhHHHHHHHHHHHHhC-CCeEEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEc-CCcC-CCCCCC
Q 021963 87 RVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRA-PYGA-VGHGGH 163 (305)
Q Consensus 87 r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~-~~g~-~~~~g~ 163 (305)
|++.+ ..|+++..+|-|.|.. |...++..|+++-..-++.-|.+ +-+. .+ |||++. .... .-+.+.
T Consensus 122 ~~v~~-~hE~~Aa~aAdGyAr~tGkpgvv~~TsGpG~~N~~~gia~-A~~d--------~v-PllvItG~~~~~~~g~~a 190 (677)
T 1t9b_A 122 NFVLP-KHEQGAGHMAEGYARASGKPGVVLVTSGPGATNVVTPMAD-AFAD--------GI-PMVVFTGQVPTSAIGTDA 190 (677)
T ss_dssp EEECC-SSHHHHHHHHHHHHHHHSSCEEEEECSTHHHHTTHHHHHH-HHHH--------TC-CEEEEEEECCTTTTTSCC
T ss_pred eEEEe-CChHHHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHHHH-HHHc--------CC-CEEEEeCCCChhhcCCCC
Confidence 66655 8999999999999997 65545555788876555555553 2222 23 555442 2111 112334
Q ss_pred CCCchHHHHHccCCCcEEEeeCCHHHHHHHHHHhHh-----CCCCEEEeccccc
Q 021963 164 YHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIR-----DPNPVVFFEPKWL 212 (305)
Q Consensus 164 ~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a~~-----~~~Pv~i~~~~~l 212 (305)
++..+..++++.+-.. .+...+++++...++.|++ .++||+|-.|+.+
T Consensus 191 ~Q~~Dq~~i~~~~tk~-~~~v~~~~~i~~~i~~A~~~A~~grpGPV~l~lP~Dv 243 (677)
T 1t9b_A 191 FQEADVVGISRSCTKW-NVMVKSVEELPLRINEAFEIATSGRPGPVLVDLPKDV 243 (677)
T ss_dssp TTCCCHHHHTGGGSSE-EEECCSGGGHHHHHHHHHHHHHSSSCCEEEEEEEHHH
T ss_pred ccccCHHHHhhhheeE-EEEcCCHHHHHHHHHHHHHHHhhCCCceEEEEcCHHH
Confidence 4445667888887665 4445678888888888887 3699999777554
No 41
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=93.43 E-value=0.28 Score=48.37 Aligned_cols=113 Identities=12% Similarity=-0.019 Sum_probs=72.6
Q ss_pred cEEecchhHHHHHHHHHHHHhC-CCeEEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEc-CCc-CCCCCC-
Q 021963 87 RVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRA-PYG-AVGHGG- 162 (305)
Q Consensus 87 r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~-~~g-~~~~~g- 162 (305)
|++.+ ..|+++..+|-|+|.. |...++..|+++...-++.-+.+ +-+. .+ |++++. ... ..-+.+
T Consensus 45 ~~v~~-~hE~~Aa~~A~GyAr~tg~p~v~~~TsGpG~~N~~~gv~~-A~~~--------~v-Pll~itg~~~~~~~~~~~ 113 (589)
T 2pgn_A 45 RVINP-ATELGGAWMVNGYNYVKDRSAAVGAWHCVGNLLLHAAMQE-ARTG--------RI-PAVHIGLNSDGRLAGRSE 113 (589)
T ss_dssp TCBCC-SSHHHHHHHHHHHHHHHTSCCEEEEEEGGGGGGCHHHHHH-HHHT--------TC-CEEEEEEESCGGGTTCTT
T ss_pred eEEEe-CcHHHHHHHHHHHHHHHCCCEEEEEecCchHHHHHHHHHH-HHhc--------CC-CEEEEecCCcccccCCCC
Confidence 66665 7999999999999997 54444444688876566555553 2222 23 555442 211 112234
Q ss_pred CCCCchHHHHHccCCCcEEEeeCCHHHHHHHHHHhHh----C-CCCEEEeccccc
Q 021963 163 HYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIR----D-PNPVVFFEPKWL 212 (305)
Q Consensus 163 ~~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a~~----~-~~Pv~i~~~~~l 212 (305)
.+|..+..+ ++.+... .+...+++++...++.|++ . ++||+|-.|..+
T Consensus 114 ~~Q~~d~~~-~~~~tk~-~~~v~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~dv 166 (589)
T 2pgn_A 114 AAQQVPWQS-FTPIARS-TQRVERLDKVGEAIHEAFRVAEGHPAGPAYVDIPFDL 166 (589)
T ss_dssp CSSCCCGGG-GTTTSSE-EEECCSGGGHHHHHHHHHHHHTSSSCCEEEEEEETHH
T ss_pred cccccChhh-ccccEEE-EeecCCHHHHHHHHHHHHHHHhcCCCccEEEEeCHhh
Confidence 556555567 8887654 4556777778888887776 2 599999888765
No 42
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=93.16 E-value=0.4 Score=47.50 Aligned_cols=154 Identities=13% Similarity=0.015 Sum_probs=88.3
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEecccCCCcccccchhhHhhhCCCcEEecchhHHHHHHHHHHHHhC-CCeEEEE-ec
Q 021963 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAE-IQ 117 (305)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~g~~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~-~~ 117 (305)
++..+++.+.|. +.+=+.++..+... .....+.+.+ .+.=|++. ...|+++..+|.|+|.. |-+|.++ .|
T Consensus 27 ~~~a~~l~~~L~---~~GV~~vfg~PG~~---~~~l~~al~~-~~~i~~i~-~~~E~~Aa~~A~GyAr~tgg~~~v~~~T 98 (616)
T 2pan_A 27 MRAVDAAMYVLE---KEGITTAFGVPGAA---INPFYSAMRK-HGGIRHIL-ARHVEGASHMAEGYTRATAGNIGVCLGT 98 (616)
T ss_dssp EEHHHHHHHHHH---HTTCCEEEECCCGG---GHHHHHHHHH-HCCCEEEE-CSSHHHHHHHHHHHHHHSTTCCEEEEEC
T ss_pred CcHHHHHHHHHH---HCCCCEEEECCCCc---cHHHHHHHHh-cCCCcEEe-eCCHHHHHHHHHHHHHhcCCCceEEEeC
Confidence 455566655554 33334444433311 1112344433 31235554 48999999999999997 4555433 36
Q ss_pred ccchHHhHHHHHHHHHhhcccccCCCcccceeEEEc-C-CcCCCCCCCCCCchHHHHHccCCCcEEEeeCCHHHHHHHHH
Q 021963 118 FADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRA-P-YGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLL 195 (305)
Q Consensus 118 ~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~-~-~g~~~~~g~~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~ 195 (305)
+++-..-++.-|.+ +.+. .+ |||++. . .....+.+.++..+...+++.+-.. .+...+++++..+++
T Consensus 99 sGpG~~N~~~~l~~-A~~~--------~v-PlvvItg~~p~~~~~~~~~Q~~d~~~~~~~~tk~-~~~v~~~~~i~~~l~ 167 (616)
T 2pan_A 99 SGPAGTDMITALYS-ASAD--------SI-PILCITGQAPRARLHKEDFQAVDIEAIAKPVSKM-AVTVREAALVPRVLQ 167 (616)
T ss_dssp STHHHHTSHHHHHH-HHHT--------TC-CEEEEEEECCGGGTTTTCTTCCCHHHHHGGGSSE-EEECCSGGGHHHHHH
T ss_pred CCchHHHHHHHHHH-HHhc--------CC-CEEEEecCCcccccCcccccccCHHHHHHHHHHh-hcccCCHHHHHHHHH
Confidence 77766566666653 3222 23 555442 2 1111223333444556888888765 345567788888888
Q ss_pred HhHhC-----CCCEEEeccccc
Q 021963 196 SCIRD-----PNPVVFFEPKWL 212 (305)
Q Consensus 196 ~a~~~-----~~Pv~i~~~~~l 212 (305)
.|++. ++||+|-.|..+
T Consensus 168 ~A~~~A~~~r~GPV~l~iP~d~ 189 (616)
T 2pan_A 168 QAFHLMRSGRPGPVLVDLPFDV 189 (616)
T ss_dssp HHHHHHHSSSCCCEEEEEEHHH
T ss_pred HHHHHHhcCCCceEEEEcchhh
Confidence 88862 699999777654
No 43
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=92.66 E-value=0.29 Score=47.98 Aligned_cols=155 Identities=12% Similarity=-0.009 Sum_probs=89.8
Q ss_pred cccHHHHHHHHHHHHHhcCCCEEEEecccCCCcccccchhhHhhhCCCcEEecchhHHHHHHHHHHHHhC-CCeEEEEec
Q 021963 39 SLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQ 117 (305)
Q Consensus 39 ~~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~g~~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~~~ 117 (305)
.++..+++.+.|.+.. -+.++.+-++ . .....+.+.+ . .=|++.+ ..|+++.-+|-|+|.. |...++..|
T Consensus 9 ~~~~a~~l~~~L~~~G--V~~vfg~PG~-~---~~~l~~al~~-~-~i~~i~~-~~E~~Aa~~A~GyAr~tg~pgv~~~T 79 (568)
T 2c31_A 9 LTDGFHVLIDALKMND--IDTMYGVVGI-P---ITNLARMWQD-D-GQRFYSF-RHEQHAGYAASIAGYIEGKPGVCLTV 79 (568)
T ss_dssp EEEHHHHHHHHHHHTT--CCEEEECCCT-T---THHHHHHHHH-T-TCEEEEC-SSHHHHHHHHHHHHHHHSSCEEEEEC
T ss_pred cccHHHHHHHHHHHcC--CCEEEEeCCC-c---cHHHHHHHHh-C-CCcEEEe-CcHHHHHHHHHHHHHHhCCCEEEEEc
Confidence 3566666666665442 2344444333 1 1112234433 3 3477666 8999999999999998 654455546
Q ss_pred ccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCC---CC-CCCCCCchHHHHHccCCCcEEEeeCCHHHHHHH
Q 021963 118 FADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV---GH-GGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGL 193 (305)
Q Consensus 118 ~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~---~~-~g~~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~ 193 (305)
+++-..-++.-+.+ +.+. .+ ||+++...-+. +. .+.++..+...+++.+-.. .+...+++++...
T Consensus 80 sGpG~~N~~~~i~~-A~~~--------~v-Pll~itg~~~~~~~~~~~~~~Q~~dq~~~~~~~tk~-~~~v~~~~~~~~~ 148 (568)
T 2c31_A 80 SAPGFLNGVTSLAH-ATTN--------CF-PMILLSGSSEREIVDLQQGDYEEMDQMNVARPHCKA-SFRINSIKDIPIG 148 (568)
T ss_dssp SHHHHHHHHHHHHH-HHHH--------TC-CEEEEEEECCHHHHHTTCCCTTCCCHHHHSGGGSSE-EEECCSGGGHHHH
T ss_pred CCccHHHHHHHHHH-HHhc--------CC-CEEEEccCCCccccCCCCCcccccCHHHHHHhhhhe-eeecCCHHHHHHH
Confidence 87766555555542 2222 23 55554221111 11 2444445566888887665 4455566677666
Q ss_pred HHHhHh-----CCCCEEEecccccc
Q 021963 194 LLSCIR-----DPNPVVFFEPKWLY 213 (305)
Q Consensus 194 l~~a~~-----~~~Pv~i~~~~~l~ 213 (305)
++.|++ .++||+|-.|..+.
T Consensus 149 i~~A~~~A~~~~~GPV~l~iP~dv~ 173 (568)
T 2c31_A 149 IARAVRTAVSGRPGGVYVDLPAKLF 173 (568)
T ss_dssp HHHHHHHHHSSSCCEEEEEEETHHH
T ss_pred HHHHHHHhcCCCCceEEEeCCHHHh
Confidence 666665 46999998887754
No 44
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=92.22 E-value=0.37 Score=47.16 Aligned_cols=154 Identities=14% Similarity=-0.015 Sum_probs=87.9
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEecccCCCcccccchhhHhhhCCCcEEecchhHHHHHHHHHHHHhC-CCeEEEEecc
Q 021963 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQF 118 (305)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~iv~~~~D~~~g~~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~~~~ 118 (305)
++..+++.+.|.+.. -+.++.+-++ . .....+.+.+ . .=|++.+ ..|+++.-+|-|.|.. |...++.+|+
T Consensus 8 ~~~a~~l~~~L~~~G--V~~vfg~PG~-~---~~~l~~al~~-~-~i~~i~~-~hE~~Aa~~A~Gyar~tg~pgv~~~Ts 78 (564)
T 2q28_A 8 TDGMHIIVEALKQNN--IDTIYGVVGI-P---VTDMARHAQA-E-GIRYIGF-RHEQSAGYAAAASGFLTQKPGICLTVS 78 (564)
T ss_dssp EEHHHHHHHHHHHTT--CCEEEECCCT-T---THHHHHHHHH-T-TCEEEEC-SSHHHHHHHHHHHHHHHSSCEEEEECS
T ss_pred CcHHHHHHHHHHHcC--CCEEEECCCc-c---hHHHHHHHHh-C-CCcEEee-CCHHHHHHHHHHHHHHhCCCEEEEEcc
Confidence 455566655555432 1344443332 1 1112234432 2 3467666 8999999999999998 6544544467
Q ss_pred cchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCC---CC-CCCCCCchHHHHHccCCCcEEEeeCCHHHHHHHH
Q 021963 119 ADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV---GH-GGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLL 194 (305)
Q Consensus 119 ~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~---~~-~g~~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l 194 (305)
++-..-++.-+.+ +.+. .+ ||+++...-+. +. .+.++..+...+++.+-.. .+...+++++...+
T Consensus 79 GpG~~N~~~gi~~-A~~~--------~v-Pll~itg~~~~~~~~~~~~~~Q~~dq~~~~~~~tk~-~~~v~~~~~~~~~i 147 (564)
T 2q28_A 79 APGFLNGLTALAN-ATVN--------GF-PMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKA-AFRVNQPQDLGIAL 147 (564)
T ss_dssp HHHHHHHHHHHHH-HHHH--------TC-CEEEEEEECCHHHHHTTSCCTTCCCHHHHHGGGSSE-EEECCSGGGHHHHH
T ss_pred CchHHHHHHHHHH-HHhc--------CC-CEEEEeCCCCccccCCCCCccccccHHHHHHHhhhe-eeecCCHHHHHHHH
Confidence 7766555555542 2222 23 55554221111 11 2444445667888888665 34445666666666
Q ss_pred HHhHh-----CCCCEEEecccccc
Q 021963 195 LSCIR-----DPNPVVFFEPKWLY 213 (305)
Q Consensus 195 ~~a~~-----~~~Pv~i~~~~~l~ 213 (305)
+.|++ .++||+|-.|..+.
T Consensus 148 ~~A~~~A~~~~~GPV~l~iP~dv~ 171 (564)
T 2q28_A 148 ARAIRVSVSGRPGGVYLDLPANVL 171 (564)
T ss_dssp HHHHHHHHSSSCCEEEEEEEHHHH
T ss_pred HHHHHHHhcCCCceEEEEcCHHHh
Confidence 66665 36999998887754
No 45
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=91.67 E-value=0.49 Score=46.77 Aligned_cols=116 Identities=16% Similarity=0.087 Sum_probs=66.0
Q ss_pred CcEEecchhHHHHHHHHHHHHhC-CCeEEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCC--CCCC
Q 021963 86 SRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV--GHGG 162 (305)
Q Consensus 86 ~r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~--~~~g 162 (305)
=|++.+ ..|+++.-+|-|.|.. |...++..|+++-..-++.-|.+ +-+. .+ |||++...-+. -+-+
T Consensus 70 i~~i~~-~hE~~Aa~aA~GyAr~tgkpgv~~~TsGpG~~N~~~gia~-A~~~--------~v-Plv~ItG~~~~~~~g~~ 138 (604)
T 2x7j_A 70 ISVHVQ-IDERSAGFFALGLAKAKQRPVLLICTSGTAAANFYPAVVE-AHYS--------RV-PIIVLTADRPHELREVG 138 (604)
T ss_dssp CEEEEC-SSHHHHHHHHHHHHHHHTSCEEEEECSSHHHHTTHHHHHH-HHHH--------TC-CEEEEEEECCGGGSSSC
T ss_pred ceEEEe-cChHHHHHHHHHHHHhhCCCEEEEECChhHHHHHHHHHHH-Hhhc--------CC-CEEEEeCCCCHHHhCCC
Confidence 367666 8999999999999997 65445444688766555555542 2222 23 55554321111 1223
Q ss_pred CCCCchHHHHHccCCCcEE--EeeCCH----HHHHHHHHHhHh-----CCCCEEEeccccc
Q 021963 163 HYHSQSPEAFFCHVPGLKV--VIPRSP----RQAKGLLLSCIR-----DPNPVVFFEPKWL 212 (305)
Q Consensus 163 ~~hs~~d~a~~~~iP~l~V--~~P~d~----~e~~~~l~~a~~-----~~~Pv~i~~~~~l 212 (305)
.++..+..++++.+-.... -.|.+. .++...++.|++ .++||+|-.|...
T Consensus 139 ~~Q~~d~~~~~~~~tk~~~~v~~~~~~~~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d~ 199 (604)
T 2x7j_A 139 APQAINQHFLFGNFVKFFTDSALPEESPQMLRYIRTLASRAAGEAQKRPMGPVHVNVPLRE 199 (604)
T ss_dssp CTTCCCCTTTTGGGSSCEEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECCS
T ss_pred CCCcCcHHHHhhhheeeeeecCCCcccchhHHHHHHHHHHHHHHhhCCCCCcEEEEcccCc
Confidence 3343444567776654433 234430 014445555544 4799999888764
No 46
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=90.39 E-value=1.9 Score=42.29 Aligned_cols=115 Identities=15% Similarity=0.122 Sum_probs=66.8
Q ss_pred CcEEecchhHHHHHHHHHHHHhC-CCeEEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcC--CCCCC
Q 021963 86 SRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA--VGHGG 162 (305)
Q Consensus 86 ~r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~--~~~~g 162 (305)
=|++.+ ..|+++.-+|-|.|.. |...++..|+++-..-++--|.+ + +.. .+ |||++...-+ .-+.+
T Consensus 50 i~~i~~-~hE~~Aa~aAdGyAr~tG~pgv~~~TsGpG~~N~~~gia~-A-~~d-------~v-Pll~itG~~p~~~~g~~ 118 (578)
T 3lq1_A 50 LKIYVD-VDERSAGFFALGLAKASKRPVVLLCTSGTAAANYFPAVAE-A-NLS-------QI-PLIVLTADRPHELRNVG 118 (578)
T ss_dssp CEEEEC-SSHHHHHHHHHHHHHHHCCCEEEEECSSHHHHTTHHHHHH-H-HHT-------TC-CEEEEEEECCGGGTTSS
T ss_pred ceEEEe-cCcHHHHHHHHHHHHhhCCCEEEEECCchhhhhhhHHHHH-H-Hhc-------CC-CeEEEeCCCCHHhhcCC
Confidence 367666 6999999999999987 65555555688876555555542 2 221 23 6665432111 11233
Q ss_pred CCCCchHHHHHccCCCc--EEEeeCCHHH----HHHHHHHhHh-----CCCCEEEecccc
Q 021963 163 HYHSQSPEAFFCHVPGL--KVVIPRSPRQ----AKGLLLSCIR-----DPNPVVFFEPKW 211 (305)
Q Consensus 163 ~~hs~~d~a~~~~iP~l--~V~~P~d~~e----~~~~l~~a~~-----~~~Pv~i~~~~~ 211 (305)
.+|..+...+++.+-.. .|-.|.+..+ +..+++.|+. .++||+|-.|.+
T Consensus 119 ~~Qe~d~~~~~~~~tk~~~~v~~~~~~~~~~~~i~~~l~~A~~~A~~gr~GPV~l~iP~d 178 (578)
T 3lq1_A 119 APQAMDQLHLYGSHVKDFTDMALPENSEEMLRYAKWHGSRAVDIAMKTPRGPVHLNFPLR 178 (578)
T ss_dssp CTTCCCCTTTTGGGSSEEEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCCEEEEEECC
T ss_pred CCCCcCHhhHHhhheeeEeecCCCCCchHHHHHHHHHHHHHHHHhhCCCCCcEEEECccC
Confidence 44444455677766543 3334555333 2334555554 379999977764
No 47
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=88.72 E-value=1.8 Score=43.54 Aligned_cols=149 Identities=11% Similarity=0.072 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHhc-CCCEEEEecccCCCcccccchhhHhhhCCCcEEecch--hHHHHHHHHHHHHhCC-CeEEEEeccc
Q 021963 44 SAINQALHIALET-DPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPL--CEQGIVGFAIGLAAMG-NRAIAEIQFA 119 (305)
Q Consensus 44 ~a~~~~L~~l~~~-~~~iv~~~~D~~~g~~~~~~~~~~~~~gp~r~~~~gI--aE~~~v~~AaGlA~~G-~~p~~~~~~~ 119 (305)
..+...|.+.+.. .++++ ++.|++....| ....|.-.. |.+|+..|. .=-..+.+|.|+|++- -++++++ .+
T Consensus 464 ~~v~~~L~~~l~~~~~~~i-v~~~vg~~~~~-~~~~~~~~~-p~~~~~sg~~G~mG~~lpaAiGaalA~p~~~Vv~i-~G 539 (677)
T 1t9b_A 464 QTVIKKLSKVANDTGRHVI-VTTGVGQHQMW-AAQHWTWRN-PHTFITSGGLGTMGYGLPAAIGAQVAKPESLVIDI-DG 539 (677)
T ss_dssp HHHHHHHHHHHHTTCSCEE-EEECSSHHHHH-HHHHSCCCS-TTCEECCCSSCCTTCHHHHHHHHHHHCTTSEEEEE-EE
T ss_pred HHHHHHHHHHhhcCCCCEE-EEeCCchHHHH-HHHhcccCC-CCeEEeCCCcchhhchHHHHHHHHHhCCCCeEEEE-Ee
Confidence 4566777777754 34444 45665411111 011122223 678887654 1122678888888763 3555654 55
Q ss_pred c--hHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCC----------CC--CCCC-CCchHHHHHccCCCcEEEee
Q 021963 120 D--YIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV----------GH--GGHY-HSQSPEAFFCHVPGLKVVIP 184 (305)
Q Consensus 120 ~--F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~----------~~--~g~~-hs~~d~a~~~~iP~l~V~~P 184 (305)
+ |.+ .+..+. .++..+ +|+ .+|+..-++.. .. .++. +..+-..+.+.+ |+..+..
T Consensus 540 DGsf~~-~~~eL~-ta~~~~------l~v-~ivV~NN~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~la~a~-G~~~~~v 609 (677)
T 1t9b_A 540 DASFNM-TLTELS-SAVQAG------TPV-KILILNNEEQGMVTQWQSLFYEHRYSHTHQLNPDFIKLAEAM-GLKGLRV 609 (677)
T ss_dssp HHHHHH-HGGGHH-HHHHHT------CCC-EEEEEECSSCHHHHHHHHHHSTTCCCSCCCCCCCHHHHHHHT-TCEEEEE
T ss_pred ehHHhc-cHHHHH-HHHHhC------CCe-EEEEEeCCCchhhhhhhhhhcCCCcccCcCCCCCHHHHHHHc-CCeEEEE
Confidence 5 333 223333 233333 455 55554433321 11 1111 122223445555 6777788
Q ss_pred CCHHHHHHHHHHhHhCCCCEEE
Q 021963 185 RSPRQAKGLLLSCIRDPNPVVF 206 (305)
Q Consensus 185 ~d~~e~~~~l~~a~~~~~Pv~i 206 (305)
.+.+|+...++++++.++|++|
T Consensus 610 ~~~~el~~al~~a~~~~gp~lI 631 (677)
T 1t9b_A 610 KKQEELDAKLKEFVSTKGPVLL 631 (677)
T ss_dssp CSHHHHHHHHHHHHHCSSCEEE
T ss_pred CCHHHHHHHHHHHHHCCCcEEE
Confidence 9999999999999999999998
No 48
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=87.11 E-value=2.6 Score=41.04 Aligned_cols=114 Identities=14% Similarity=0.041 Sum_probs=66.7
Q ss_pred cEEecchhHHHHHHHHHHHHhC-CCeEEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCC---C-CC
Q 021963 87 RVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV---G-HG 161 (305)
Q Consensus 87 r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~---~-~~ 161 (305)
|++.+ ..|+++..+|.|.|.. | .+++.+|+++-..-++.-+.+ +.+. .+ ||+++...-+. + +.
T Consensus 44 ~~v~~-~~E~~Aa~~A~Gyar~tg-~~v~~~TsGpG~~N~~~gia~-A~~~--------~~-Pll~itg~~~~~~~~~~~ 111 (563)
T 2vk8_A 44 RWAGN-ANELNAAYAADGYARIKG-MSCIITTFGVGELSALNGIAG-SYAE--------HV-GVLHVVGVPSISAQAKQL 111 (563)
T ss_dssp EECCC-SSHHHHHHHHHHHHHHHS-CEEEEEETTHHHHHHHHHHHH-HHHH--------TC-CEEEEEEECCHHHHHTTC
T ss_pred eEEcc-CchHHHHHHHHHHHHhhC-CcEEEEcCCCcHHHHHHHHHH-HHhh--------CC-CEEEEECCCChHHhhccc
Confidence 56554 8999999999999986 7 655555677765555555543 2222 23 55544211111 1 11
Q ss_pred CCCCC------chHHHHHccCCCcEEEeeCCHHHHHH----HHHHhHhCCCCEEEecccccc
Q 021963 162 GHYHS------QSPEAFFCHVPGLKVVIPRSPRQAKG----LLLSCIRDPNPVVFFEPKWLY 213 (305)
Q Consensus 162 g~~hs------~~d~a~~~~iP~l~V~~P~d~~e~~~----~l~~a~~~~~Pv~i~~~~~l~ 213 (305)
..||. |+...+++.+-.. .+...+++++.. +++.|...++||+|-.|..+.
T Consensus 112 ~~~~~~g~~~~q~~~~~~~~~~k~-~~~v~~~~~~~~~i~~A~~~A~~~~GPV~l~iP~d~~ 172 (563)
T 2vk8_A 112 LLHHTLGNGDFTVFHRMSANISET-TAMITDIATAPAEIDRCIRTTYVTQRPVYLGLPANLV 172 (563)
T ss_dssp CCTTSCSSSCSSHHHHHHHTTCSE-EEECCCTTTHHHHHHHHHHHHHHHTSCEEEEEETTGG
T ss_pred ccccccCCcchHHHHHHhhhhEEE-EEEeCCHHHHHHHHHHHHHHHHhCCCCEEEEechhhh
Confidence 22331 2346788888654 444455444444 444444447999998887764
No 49
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=86.74 E-value=3.2 Score=40.22 Aligned_cols=113 Identities=13% Similarity=-0.038 Sum_probs=63.9
Q ss_pred cEEecchhHHHHHHHHHHHHhC-CCeEEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCC---C-CC
Q 021963 87 RVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV---G-HG 161 (305)
Q Consensus 87 r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~---~-~~ 161 (305)
|++. ...|+++..+|.|.|.. | .+++..++++-..-++--+.+ +... .+ |+|++...-+. + +.
T Consensus 45 ~~i~-~~~E~~A~~~A~Gyar~tg-~~v~~~tsGpG~~N~~~gv~~-A~~~--------~~-Pll~itg~~p~~~~~~~~ 112 (552)
T 1ovm_A 45 CWVG-CANELNASYAADGYARCKG-FAALLTTFGVGELSAMNGIAG-SYAE--------HV-PVLHIVGAPGTAAQQRGE 112 (552)
T ss_dssp EEEE-CSSHHHHHHHHHHHHHHHS-CEEEEEETTHHHHHTHHHHHH-HHHT--------TC-CEEEEEEECCHHHHHHTC
T ss_pred eEEe-eCcHHHHHHHHHHHHHhhC-CcEEEEccCCcHHHHHHHHHH-Hhhh--------cC-CEEEEECCCCHHHHhccc
Confidence 5554 48999999999999987 6 655554677765555554542 2221 23 55544211111 1 11
Q ss_pred CCCCC------chHHHHHccCCCcEEEeeCCHHHHHHHHHHhH----hCCCCEEEecccccc
Q 021963 162 GHYHS------QSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCI----RDPNPVVFFEPKWLY 213 (305)
Q Consensus 162 g~~hs------~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a~----~~~~Pv~i~~~~~l~ 213 (305)
..||. |+...+++.+-......+. +++...++.|+ ..++||+|-.|..+.
T Consensus 113 ~~~~~~g~~~~q~~~~~~~~~tk~~~~v~~--~~~~~~i~~A~~~a~~~~GPV~l~iP~d~~ 172 (552)
T 1ovm_A 113 LLHHTLGDGEFRHFYHMSEPITVAQAVLTE--QNACYEIDRVLTTMLRERRPGYLMLPADVA 172 (552)
T ss_dssp CCTTSCSSSCCSHHHHHTGGGCSEEEECCT--TTHHHHHHHHHHHHHHHTCCEEEEEEHHHH
T ss_pred ccccccCCCcHHHHHHHHHhheeEEEEEcc--ccHHHHHHHHHHHHHhCCCCEEEEeehhhc
Confidence 12221 2345677877665444443 44444444444 347999998777653
No 50
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=86.01 E-value=2.7 Score=41.02 Aligned_cols=112 Identities=13% Similarity=0.021 Sum_probs=65.7
Q ss_pred cEEecchhHHHHHHHHHHHHhC-CCeEEEEecccchHHhHHHHHHHHHhhcccccCCCcccceeEEEc-CCcC--CCCC-
Q 021963 87 RVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRA-PYGA--VGHG- 161 (305)
Q Consensus 87 r~~~~gIaE~~~v~~AaGlA~~-G~~p~~~~~~~~F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~-~~g~--~~~~- 161 (305)
|++. ...|++++.+|.|.|.. | ..++..++++...-++.-+.+ +.+. .+ |+|++. .... .+.+
T Consensus 65 ~~i~-~~~E~~A~~~A~GyAr~tG-~~v~~~tsGpG~~N~~~gi~~-A~~~--------~v-Plv~itg~~~~~~~~~~~ 132 (570)
T 2vbf_A 65 KWIG-NANELNASYMADGYARTKK-AAAFLTTFGVGELSAINGLAG-SYAE--------NL-PVVEIVGSPTSKVQNDGK 132 (570)
T ss_dssp EEEE-CSSHHHHHHHHHHHHHHHS-CEEEEEETTHHHHHHHHHHHH-HHHT--------TC-CEEEEEEECCHHHHHHTC
T ss_pred eEEC-cCcHHHHHHHHHHHHHHhC-CeEEEEcCCCCHHHHHHHHHH-Hhhh--------CC-CEEEEeCCCCHHHhhccc
Confidence 5555 48999999999999964 8 555544677766555555552 2221 23 555542 1111 1112
Q ss_pred CCCCC-----c-hHHHHHccCCCcEEEeeCCHHHHHHHHHHhHh----CCCCEEEeccccc
Q 021963 162 GHYHS-----Q-SPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIR----DPNPVVFFEPKWL 212 (305)
Q Consensus 162 g~~hs-----~-~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a~~----~~~Pv~i~~~~~l 212 (305)
..||. . +...+++.+....... .+ +++...++.|++ .++||+|-.|..+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~tk~~~~v-~~-~~~~~~l~~A~~~A~~~~GPV~l~iP~d~ 191 (570)
T 2vbf_A 133 FVHHTLADGDFKHFMKMHEPVTAARTLL-TA-ENATYEIDRVLSQLLKERKPVYINLPVDV 191 (570)
T ss_dssp CCTTSCSSSCCCHHHHHTGGGCSEEEEC-CT-TTHHHHHHHHHHHHHHHCCCEEEEEEHHH
T ss_pred cceeeccccchHHHHHHhhhhEEEEEEE-Cc-ccHHHHHHHHHHHHhhCCCCEEEEcchhh
Confidence 22442 1 2357788877654443 44 666666665554 4799999877664
No 51
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=76.31 E-value=8 Score=37.43 Aligned_cols=112 Identities=13% Similarity=0.118 Sum_probs=61.4
Q ss_pred CCcEEecc-h-hHHHHHHHHHHHHhCC-CeEEEEecccchH-HhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCC--
Q 021963 85 KSRVFNTP-L-CEQGIVGFAIGLAAMG-NRAIAEIQFADYI-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV-- 158 (305)
Q Consensus 85 p~r~~~~g-I-aE~~~v~~AaGlA~~G-~~p~~~~~~~~F~-~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~-- 158 (305)
|.+|+..+ - +=-..+++|.|++++. -++++++ .++.. +..+..+. .++..+ +|+ .+|+...++..
T Consensus 396 ~~~~~~~~~~g~mG~~l~~AiGaala~~~~~vv~i-~GDGs~~~~~~~L~-ta~~~~------l~~-~ivv~nN~~~g~~ 466 (549)
T 3eya_A 396 KRRLLGSFNHGSMANAMPQALGAQATEPERQVVAM-CGDGGFSMLMGDFL-SVVQMK------LPV-KIVVFNNSVLGFV 466 (549)
T ss_dssp SCEEECCTTTCCTTCHHHHHHHHHHHSTTSCEEEE-EEHHHHHHTGGGHH-HHHHTT------CCC-EEEEEECSBCCCC
T ss_pred CCcEEeCCCCchhhhHHHHHHHHHHhCCCCcEEEE-EccchhhccHHHHH-HHHHhC------CCe-EEEEEeCCccHHH
Confidence 56777521 0 1114678888988874 4566665 55532 12222232 233333 455 45544433221
Q ss_pred C-CC--------C-CCCCchHHHHHccCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 021963 159 G-HG--------G-HYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (305)
Q Consensus 159 ~-~~--------g-~~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a~~~~~Pv~i 206 (305)
. .. + ..+..+-..+.+.+ |+..+...+++|+...++++++.++|++|
T Consensus 467 ~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~li 523 (549)
T 3eya_A 467 AMEMKAGGYLTDGTELHDTNFARIAEAC-GITGIRVEKASEVDEALQRAFSIDGPVLV 523 (549)
T ss_dssp ------------CCBCCCCCHHHHHHHT-TSEEEEECSGGGHHHHHHHHHHSSSCEEE
T ss_pred HHHHHhcCCCCcCCcCCCCCHHHHHHHc-CCcEEEeCCHHHHHHHHHHHHhCCCCEEE
Confidence 0 00 0 01111222344444 67777889999999999999999999998
No 52
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=74.97 E-value=11 Score=36.49 Aligned_cols=111 Identities=13% Similarity=0.220 Sum_probs=62.5
Q ss_pred CCcEEecchh--HHHHHHHHHHHHhCCCeEEEEecccc--hHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcC-CC
Q 021963 85 KSRVFNTPLC--EQGIVGFAIGLAAMGNRAIAEIQFAD--YIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA-VG 159 (305)
Q Consensus 85 p~r~~~~gIa--E~~~v~~AaGlA~~G~~p~~~~~~~~--F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~-~~ 159 (305)
|.++++.|.. =-..+++|.|+|++.-++++++ .++ |.+ .+..+. .+...+ +|+ .+|+..-++. ..
T Consensus 416 p~~~~~~g~~g~~G~~l~~AiGaala~~~~vv~i-~GDGsf~~-~~~el~-ta~~~~------l~~-~ivv~NN~~~~~~ 485 (568)
T 2c31_A 416 PRKRLDSGTWGVMGIGMGYCVAAAAVTGKPVIAV-EGDSAFGF-SGMELE-TICRYN------LPV-TVIIMNNGGIYKG 485 (568)
T ss_dssp TTCEEESTTTTCSSCHHHHHHHHHHHHCSCEEEE-EEHHHHHT-TGGGHH-HHHHTT------CCE-EEEEEESSBSSCS
T ss_pred CCeEEcCCCCccccccHHHHHHHHhCCCCcEEEE-EcchHhhc-cHHHHH-HHHHhC------CCe-EEEEEeCchhHHH
Confidence 6777765431 1134778888887633555664 555 332 222222 233333 465 5555544432 11
Q ss_pred CC-----CC-----CCCchHHHHHccCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 021963 160 HG-----GH-----YHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (305)
Q Consensus 160 ~~-----g~-----~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a~~~~~Pv~i 206 (305)
.. +. .+..+-..+.+.+ |+..+...+.+|+...++++++.++|++|
T Consensus 486 ~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~~p~li 541 (568)
T 2c31_A 486 NEADPQPGVISCTRLTRGRYDMMMEAF-GGKGYVANTPAELKAALEEAVASGKPCLI 541 (568)
T ss_dssp CCCCSBTTBCCTTBCCCCCHHHHHHTT-TCEEEEESSHHHHHHHHHHHHHHTSCEEE
T ss_pred HHHHhhcCCcccCcCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEE
Confidence 10 00 1111222344444 77788889999999999999988899998
No 53
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=74.30 E-value=6.7 Score=31.42 Aligned_cols=49 Identities=16% Similarity=0.214 Sum_probs=31.9
Q ss_pred ChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccCcEEEEe
Q 021963 247 GAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLPRS 297 (305)
Q Consensus 247 G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvE 297 (305)
|++-..|...++.|++.|++++++|+... .|.+.+.+.+.+++.||+.=
T Consensus 16 GnT~~iA~~ia~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~d~ii~Gs 64 (159)
T 3fni_A 16 GYSDRLAQAIINGITKTGVGVDVVDLGAA--VDLQELRELVGRCTGLVIGM 64 (159)
T ss_dssp TTHHHHHHHHHHHHHHTTCEEEEEESSSC--CCHHHHHHHHHTEEEEEEEC
T ss_pred hHHHHHHHHHHHHHHHCCCeEEEEECcCc--CCHHHHHHHHHhCCEEEEEc
Confidence 44455566666777778999999987643 14555555566676666643
No 54
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=74.26 E-value=14 Score=31.51 Aligned_cols=50 Identities=10% Similarity=0.193 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccCcEEEEeCCccc
Q 021963 251 SIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLPRSSGYWR 302 (305)
Q Consensus 251 ~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvEe~~~~ 302 (305)
..+.++++.|++.|.+++++|+.. ++|.+...+.++..+.||+.-.-|+.
T Consensus 47 ~L~~~~~~~l~~~g~ev~~~dL~~--~~Dv~~~~~~l~~aD~iv~~~P~y~~ 96 (218)
T 3rpe_A 47 TLTNVAADFLRESGHQVKITTVDQ--GYDIESEIENYLWADTIIYQMPAWWM 96 (218)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEGGG--CCCHHHHHHHHHHCSEEEEEEECBTT
T ss_pred HHHHHHHHHHhhCCCEEEEEECCC--ccCHHHHHHHHHhCCEEEEECChHhc
Confidence 344456677888899999999985 78888888889999999987665543
No 55
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=72.85 E-value=7.9 Score=37.87 Aligned_cols=112 Identities=8% Similarity=0.016 Sum_probs=62.6
Q ss_pred CCcEEecch-hH-HHHHHHHHHHHhCC-CeEEEEecccchH-HhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCC--
Q 021963 85 KSRVFNTPL-CE-QGIVGFAIGLAAMG-NRAIAEIQFADYI-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV-- 158 (305)
Q Consensus 85 p~r~~~~gI-aE-~~~v~~AaGlA~~G-~~p~~~~~~~~F~-~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~-- 158 (305)
|.+|++.|- .= -..++.|.|+|++- -++++++ .++.. +..+..+. .++..+ +|+ .+|+...++..
T Consensus 416 ~~~~~~~g~~G~~G~~l~~AiGaala~~~~~vv~i-~GDGs~~~~~~~L~-ta~~~~------l~~-~ivv~NN~~~~~~ 486 (590)
T 1ybh_A 416 PRQWLSSGGLGAMGFGLPAAIGASVANPDAIVVDI-DGDGSFIMNVQELA-TIRVEN------LPV-KVLLLNNQHLGMV 486 (590)
T ss_dssp TTSEECCCSSCCTTCHHHHHHHHHHHCTTSCEEEE-EEHHHHHHTTTHHH-HHHHTT------CCE-EEEEEECSBCHHH
T ss_pred CCeEEeCCCcccccchHHHHHHHHHhCCCCcEEEE-EccchhhccHHHHH-HHHHhC------CCc-EEEEEECCcchHH
Confidence 678888753 22 23778889988763 3566664 56532 22233333 233333 455 44544433321
Q ss_pred --------CCC--CC---C-C----CchHH-HHHccCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 021963 159 --------GHG--GH---Y-H----SQSPE-AFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (305)
Q Consensus 159 --------~~~--g~---~-h----s~~d~-a~~~~iP~l~V~~P~d~~e~~~~l~~a~~~~~Pv~i 206 (305)
+.. .. + | ..-|. .+.+.+ |+..+...+.+|+...++++++.++|++|
T Consensus 487 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~li 552 (590)
T 1ybh_A 487 MQWEDRFYKANRAHTFLGDPAQEDEIFPNMLLFAAAC-GIPAARVTKKADLREAIQTMLDTPGPYLL 552 (590)
T ss_dssp HHHHHHHSTTCCCSCBCSCGGGTTSCSSCHHHHHHHT-TCCEEEECBHHHHHHHHHHHHHSSSCEEE
T ss_pred HHHHHHhcCCccccccccccccccCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEE
Confidence 000 00 0 0 01133 344444 55556668999999999999999999998
No 56
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=72.19 E-value=8.2 Score=29.57 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=36.9
Q ss_pred hhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccC
Q 021963 248 AQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTG 291 (305)
Q Consensus 248 ~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~ 291 (305)
.....|.+|.+.|++.|++.+++|+.. .|.+.+.|.+.+++.+
T Consensus 11 ~~C~~c~ka~~~L~~~gi~~~~~di~~-~~~~~~eL~~~l~~~g 53 (120)
T 3fz4_A 11 PKCSTCRRAKAELDDLAWDYDAIDIKK-NPPAASLIRNWLENSG 53 (120)
T ss_dssp SSCHHHHHHHHHHHHHTCCEEEEETTT-SCCCHHHHHHHHHHSC
T ss_pred CCChHHHHHHHHHHHcCCceEEEEecc-CchhHHHHHHHHHHcC
Confidence 446789999999999999999999987 7999999988887653
No 57
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=72.09 E-value=8.6 Score=29.37 Aligned_cols=42 Identities=10% Similarity=0.083 Sum_probs=35.8
Q ss_pred hhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhcc
Q 021963 248 AQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKT 290 (305)
Q Consensus 248 ~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~ 290 (305)
.....|.+|.+.|++.|++.+++|+.. .|.+.+.|.+.+++.
T Consensus 8 ~~C~~c~ka~~~L~~~gi~~~~~di~~-~~~~~~el~~~l~~~ 49 (120)
T 3l78_A 8 PSCTSCRKARAWLNRHDVVFQEHNIMT-SPLSRDELLKILSYT 49 (120)
T ss_dssp SSCHHHHHHHHHHHHTTCCEEEEETTT-SCCCHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEeccc-CCCcHHHHHHHHhhc
Confidence 446789999999999999999999976 688999998887753
No 58
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=71.39 E-value=6.1 Score=29.84 Aligned_cols=49 Identities=18% Similarity=0.259 Sum_probs=37.2
Q ss_pred EEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccC
Q 021963 241 ITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTG 291 (305)
Q Consensus 241 v~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~ 291 (305)
++|.+. .....|.+|.+.|++.|++.+++|+.. .|++.+.+.+.+++.+
T Consensus 2 i~iY~~-~~C~~C~kak~~L~~~gi~~~~~di~~-~~~~~~~l~~~~~~~g 50 (114)
T 1rw1_A 2 YVLYGI-KACDTMKKARTWLDEHKVAYDFHDYKA-VGIDREHLRRWCAEHG 50 (114)
T ss_dssp EEEEEC-SSCHHHHHHHHHHHHTTCCEEEEEHHH-HCCCHHHHHHHHHHHC
T ss_pred EEEEEC-CCChHHHHHHHHHHHCCCceEEEeecC-CCCCHHHHHHHHHhCC
Confidence 344443 456789999999999999999999975 6788888777665443
No 59
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=70.62 E-value=13 Score=28.70 Aligned_cols=46 Identities=15% Similarity=0.134 Sum_probs=36.0
Q ss_pred EEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHh
Q 021963 241 ITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR 288 (305)
Q Consensus 241 v~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~ 288 (305)
++|.+ -.....|.+|.+.|++.|++.+++|+.. .|.+.+.+.+.++
T Consensus 3 i~lY~-~~~C~~C~ka~~~L~~~gi~y~~~di~~-~~~~~~el~~~l~ 48 (132)
T 1z3e_A 3 VTLYT-SPSCTSCRKARAWLEEHEIPFVERNIFS-EPLSIDEIKQILR 48 (132)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHHTTCCEEEEETTT-SCCCHHHHHHHHH
T ss_pred EEEEe-CCCChHHHHHHHHHHHcCCceEEEEccC-CCccHHHHHHHHH
Confidence 44443 3556889999999999999999999976 6777888877665
No 60
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=70.24 E-value=9.3 Score=29.24 Aligned_cols=48 Identities=13% Similarity=0.111 Sum_probs=33.0
Q ss_pred eChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccCcEEEEeCCc
Q 021963 246 WGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLPRSSGY 300 (305)
Q Consensus 246 ~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvEe~~ 300 (305)
+|.+-..|...++.|++.|++++++|+....| + .+.+++.|++.=..|
T Consensus 9 tGnT~~iA~~ia~~l~~~g~~v~~~~~~~~~~---~----~l~~~d~iiig~pty 56 (138)
T 5nul_A 9 TGNTEKMAELIAKGIIESGKDVNTINVSDVNI---D----ELLNEDILILGCSAM 56 (138)
T ss_dssp SSHHHHHHHHHHHHHHHTTCCCEEEEGGGCCH---H----HHTTCSEEEEEECCB
T ss_pred CchHHHHHHHHHHHHHHCCCeEEEEEhhhCCH---H----HHhhCCEEEEEcCcc
Confidence 46666777777778888899999999876532 2 245666677665443
No 61
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=70.12 E-value=10 Score=36.83 Aligned_cols=29 Identities=21% Similarity=0.279 Sum_probs=26.6
Q ss_pred CcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 021963 178 GLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (305)
Q Consensus 178 ~l~V~~P~d~~e~~~~l~~a~~~~~Pv~i 206 (305)
|+.-+...+++|+...++++++.++|++|
T Consensus 505 G~~~~~v~~~~~l~~al~~a~~~~gp~li 533 (556)
T 3hww_A 505 ELKYHRPQNWQELETAFADAWRTPTTTVI 533 (556)
T ss_dssp TCEEECCSSHHHHHHHHHHHTTSSSEEEE
T ss_pred CCcEEecCCHHHHHHHHHHHHhCCCCEEE
Confidence 67788889999999999999999999998
No 62
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=69.87 E-value=7.3 Score=38.29 Aligned_cols=112 Identities=11% Similarity=-0.016 Sum_probs=62.0
Q ss_pred CCcEEecch--hHHHHHHHHHHHHhCC-CeEEEEecccchH-HhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCC--
Q 021963 85 KSRVFNTPL--CEQGIVGFAIGLAAMG-NRAIAEIQFADYI-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV-- 158 (305)
Q Consensus 85 p~r~~~~gI--aE~~~v~~AaGlA~~G-~~p~~~~~~~~F~-~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~-- 158 (305)
|.+|+..+. +=-..+++|.|+++.. -++++++ .++.. +..++.+. .++..+ +|+ .+|+..-.+..
T Consensus 410 ~~~~~~~~~~g~~G~~l~~A~Gaala~~~~~vv~~-~GDG~~~~~~~~l~-~a~~~~------lp~-~~vv~nN~~~~~~ 480 (603)
T 4feg_A 410 SNRHITSNLFATMGVGIPGAIAAKLNYPERQVFNL-AGDGGASMTMQDLA-TQVQYH------LPV-INVVFTNCQYGFI 480 (603)
T ss_dssp TCEEECCCSSCCTTCHHHHHHHHHHHCTTSCEEEE-EEHHHHHHHGGGHH-HHHHTT------CCC-EEEEEECSBCHHH
T ss_pred CCceecCcccccccchhHHHhhHHHhCCCCcEEEE-eccHHHhhhHHHHH-HHHHHC------cCe-EEEEEECCchHHH
Confidence 567776432 1123678888888875 3566664 66632 22333333 233333 455 44444332221
Q ss_pred ---------C-CCCCCCCchHH-HHHccCCCcEEEeeCCHHHHHHHHHHhH--hCCCCEEE
Q 021963 159 ---------G-HGGHYHSQSPE-AFFCHVPGLKVVIPRSPRQAKGLLLSCI--RDPNPVVF 206 (305)
Q Consensus 159 ---------~-~~g~~hs~~d~-a~~~~iP~l~V~~P~d~~e~~~~l~~a~--~~~~Pv~i 206 (305)
. ..++.....|+ .+.... |+..+.+.+++|+...++++. +.++|++|
T Consensus 481 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~~~gP~lI 540 (603)
T 4feg_A 481 KDEQEDTNQNDFIGVEFNDIDFSKIADGV-HMQAFRVNKIEQLPDVFEQAKAIAQHEPVLI 540 (603)
T ss_dssp HHHHHHHCSSCCCSSBCCCCCHHHHHHHT-TCEEEEECBGGGHHHHHHHHHHHTTTSCEEE
T ss_pred HHHHHHhcCCCcccCcCCCCCHHHHHHHC-CCeEEEECCHHHHHHHHHHHHHhcCCCcEEE
Confidence 1 11111111233 333433 666777889999999999999 88999999
No 63
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=69.50 E-value=3.6 Score=30.79 Aligned_cols=37 Identities=8% Similarity=0.076 Sum_probs=31.7
Q ss_pred CCcEEEEEeCh----hHHHHHHHHHHHHhcCCCeEEEEecc
Q 021963 238 GSDITLVGWGA----QLSIMEQACLDAEKEGISCELIDLKT 274 (305)
Q Consensus 238 g~dv~Iia~G~----~~~~aleAa~~L~~~Gi~~~vI~~~~ 274 (305)
..+++|++.++ .-..|.+|.+.|++.|++.+.+|+..
T Consensus 17 ~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~~~~~dI~~ 57 (109)
T 3ipz_A 17 SEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNILE 57 (109)
T ss_dssp SSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGG
T ss_pred cCCEEEEEecCCCCCCChhHHHHHHHHHHcCCCcEEEECCC
Confidence 45788888873 67889999999999999999999864
No 64
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=69.27 E-value=5.6 Score=29.54 Aligned_cols=37 Identities=19% Similarity=0.198 Sum_probs=31.4
Q ss_pred CCcEEEEEeC----hhHHHHHHHHHHHHhcCCCeEEEEecc
Q 021963 238 GSDITLVGWG----AQLSIMEQACLDAEKEGISCELIDLKT 274 (305)
Q Consensus 238 g~dv~Iia~G----~~~~~aleAa~~L~~~Gi~~~vI~~~~ 274 (305)
..+++|.+.| .....|.+|.+.|++.|++...+|+..
T Consensus 14 ~~~vvvy~~g~~~~~~Cp~C~~ak~~L~~~~i~~~~vdi~~ 54 (109)
T 1wik_A 14 KASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILE 54 (109)
T ss_dssp TSSEEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESSS
T ss_pred cCCEEEEEecCCCCCCCchHHHHHHHHHHcCCCeEEEECCC
Confidence 4578999887 566789999999999999999999875
No 65
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=69.23 E-value=11 Score=30.16 Aligned_cols=51 Identities=16% Similarity=0.263 Sum_probs=34.1
Q ss_pred ChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccCcEEEEeCCc
Q 021963 247 GAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLPRSSGY 300 (305)
Q Consensus 247 G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvEe~~ 300 (305)
|++-..|...++.|++.|++++++|+... |.+.+...+.+++.|++.=..|
T Consensus 12 GnT~~~A~~ia~~l~~~g~~v~~~~~~~~---~~~~~~~~~~~~d~ii~Gspty 62 (161)
T 3hly_A 12 GYSDRLSQAIGRGLVKTGVAVEMVDLRAV---DPQELIEAVSSARGIVLGTPPS 62 (161)
T ss_dssp TTHHHHHHHHHHHHHHTTCCEEEEETTTC---CHHHHHHHHHHCSEEEEECCBS
T ss_pred hHHHHHHHHHHHHHHhCCCeEEEEECCCC---CHHHHHHHHHhCCEEEEEcCCc
Confidence 44555666666777778999999987653 4555555566777777654443
No 66
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=69.10 E-value=7.5 Score=29.81 Aligned_cols=49 Identities=12% Similarity=-0.079 Sum_probs=39.1
Q ss_pred EEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccC
Q 021963 241 ITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTG 291 (305)
Q Consensus 241 v~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~ 291 (305)
++|.+ -.....|.+|.+.|++.|++.+++|+.. .|...+.|.+.+++.+
T Consensus 6 i~iY~-~p~C~~c~ka~~~L~~~gi~~~~~di~~-~~~~~~eL~~~l~~~g 54 (120)
T 3gkx_A 6 TLFLQ-YPACSTCQKAKKWLIENNIEYTNRLIVD-DNPTVEELKAWIPLSG 54 (120)
T ss_dssp CEEEE-CTTCHHHHHHHHHHHHTTCCCEEEETTT-TCCCHHHHHHHHHHHT
T ss_pred EEEEE-CCCChHHHHHHHHHHHcCCceEEEeccc-CcCCHHHHHHHHHHcC
Confidence 34444 3456789999999999999999999987 7889999888877543
No 67
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=67.13 E-value=27 Score=33.77 Aligned_cols=111 Identities=10% Similarity=-0.038 Sum_probs=63.6
Q ss_pred CCcEEe---cchhHHHHHHHHHHHHhCC---CeEEEEecccchH-HhHHHHHHHHHhhcccccCCCcccceeEEEcCCcC
Q 021963 85 KSRVFN---TPLCEQGIVGFAIGLAAMG---NRAIAEIQFADYI-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA 157 (305)
Q Consensus 85 p~r~~~---~gIaE~~~v~~AaGlA~~G---~~p~~~~~~~~F~-~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~ 157 (305)
|.+|+. +|.- -..++.|.|+|++- -++++++ .++.. +..+..+. .++..+ +|+ .+|+...++.
T Consensus 409 ~~~~~~~~g~g~~-G~~l~~AiGaa~a~~~~~~~vv~i-~GDG~~~~~~~~L~-ta~~~~------l~~-~ivv~nN~~~ 478 (563)
T 2uz1_A 409 PGGFLCHGYLGSM-GVGFGTALGAQVADLEAGRRTILV-TGDGSVGYSIGEFD-TLVRKQ------LPL-IVIIMNNQSW 478 (563)
T ss_dssp CSEEECCCTTCCT-TTHHHHHHHHHHHHHHHTCEEEEE-EEHHHHGGGTTHHH-HHHHHT------CCC-EEEEEECSBC
T ss_pred CCeEECCCCCccc-cChHHHHHHHHHHhhCCCCeEEEE-EccHHHhCCHHHHH-HHHHhC------CCe-EEEEEeCCcc
Confidence 677876 2322 25667888888753 4566665 55532 22333333 233333 455 4554443322
Q ss_pred C--C------CCC-CC-----CCchHHHHHccCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 021963 158 V--G------HGG-HY-----HSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (305)
Q Consensus 158 ~--~------~~g-~~-----hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a~~~~~Pv~i 206 (305)
. . .+. .. +..+-..+.+.+ |+..+...+.+|+...++++++.++|++|
T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~li 540 (563)
T 2uz1_A 479 GATLHFQQLAVGPNRVTGTRLENGSYHGVAAAF-GADGYHVDSVESFSAALAQALAHNRPACI 540 (563)
T ss_dssp HHHHHHHHHHTCTTCCCSCBCCCCCHHHHHHHT-TCEEEEECSHHHHHHHHHHHHHSSSCEEE
T ss_pred hHHHHHHHHhcCCCcccCCcCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHHCCCCEEE
Confidence 1 1 011 11 222223444555 67778889999999999999999999998
No 68
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=67.01 E-value=9.3 Score=29.07 Aligned_cols=49 Identities=24% Similarity=0.319 Sum_probs=38.6
Q ss_pred EEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccC
Q 021963 241 ITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTG 291 (305)
Q Consensus 241 v~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~ 291 (305)
++|.+. .....|.+|.+.|++.|++.+++|+.. .|.+.+.+.+.+++.+
T Consensus 7 i~iY~~-~~C~~C~ka~~~L~~~gi~y~~~di~~-~~~~~~~l~~~~~~~g 55 (120)
T 2kok_A 7 VTIYGI-KNCDTMKKARIWLEDHGIDYTFHDYKK-EGLDAETLDRFLKTVP 55 (120)
T ss_dssp EEEEEC-SSCHHHHHHHHHHHHHTCCEEEEEHHH-HCCCHHHHHHHHHHSC
T ss_pred EEEEEC-CCChHHHHHHHHHHHcCCcEEEEeeeC-CCCCHHHHHHHHHHcC
Confidence 555544 445789999999999999999999975 5888888887776654
No 69
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=66.50 E-value=5.1 Score=32.67 Aligned_cols=31 Identities=23% Similarity=0.243 Sum_probs=24.6
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEe
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~ 272 (305)
.||+||+.|..- +.+|-.|.+.|++|.|++-
T Consensus 3 ~dV~IIGaGpaG---L~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 3 VPIAIIGTGIAG---LSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CCEEEECCSHHH---HHHHHHHHHTTCCEEEECS
T ss_pred CCEEEECcCHHH---HHHHHHHHHCCCCEEEEEC
Confidence 379999999853 3456678888999999984
No 70
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=66.46 E-value=8.5 Score=29.54 Aligned_cols=49 Identities=14% Similarity=0.194 Sum_probs=39.6
Q ss_pred EEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccC
Q 021963 241 ITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTG 291 (305)
Q Consensus 241 v~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~ 291 (305)
++|.+. .....|.+|.+.|++.|++.+++|+.. .|...+.|.+.+++.+
T Consensus 7 i~iY~~-p~C~~c~ka~~~L~~~gi~~~~~di~~-~~~~~~eL~~~l~~~g 55 (121)
T 3rdw_A 7 VTIYHN-PRCSKSRETLALVEQQGITPQVVLYLE-TPPSVDKLKELLQQLG 55 (121)
T ss_dssp CEEECC-TTCHHHHHHHHHHHTTTCCCEEECTTT-SCCCHHHHHHHHHHTT
T ss_pred EEEEEC-CCCHHHHHHHHHHHHcCCCcEEEeecc-CCCcHHHHHHHHHhcC
Confidence 444433 456789999999999999999999987 7899999988887664
No 71
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=66.31 E-value=11 Score=36.50 Aligned_cols=112 Identities=15% Similarity=0.124 Sum_probs=63.1
Q ss_pred CCcEEecch--hHHHHHHHHHHHHhCC-CeEEEEecccchH-HhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCC--
Q 021963 85 KSRVFNTPL--CEQGIVGFAIGLAAMG-NRAIAEIQFADYI-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV-- 158 (305)
Q Consensus 85 p~r~~~~gI--aE~~~v~~AaGlA~~G-~~p~~~~~~~~F~-~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~-- 158 (305)
|.+|+..+- .=-..++.|.|+|++- -++++++ .++.. +..+..+. .++..+ +|+ .+|+...++..
T Consensus 410 ~~~~~~~~g~g~mG~~l~~AiGaala~~~~~vv~i-~GDG~~~~~~~~L~-ta~~~~------l~~-~ivv~nN~~~~~~ 480 (566)
T 1ozh_A 410 ARQVMISNGQQTMGVALPWAIGAWLVNPERKVVSV-SGDGGFLQSSMELE-TAVRLK------ANV-LHLIWVDNGYNMV 480 (566)
T ss_dssp CSEEECCCTTCCTTCHHHHHHHHHHHSTTSEEEEE-EEHHHHHHHTTHHH-HHHHHT------CCE-EEEEEECSBCHHH
T ss_pred CCeEEeCCCcccccchHHHHHHHHHhCCCCCEEEE-EcChHHhccHHHHH-HHHHhC------CCc-EEEEEECCchhHH
Confidence 677876320 1123567888888763 3566665 56632 22333333 233333 455 45544433221
Q ss_pred C---------CCC-CCCCchHHHHHccCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 021963 159 G---------HGG-HYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (305)
Q Consensus 159 ~---------~~g-~~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a~~~~~Pv~i 206 (305)
. ..+ ..+..+-..+.+.+ |+..+...+.+|+...++++++.++|++|
T Consensus 481 ~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~li 537 (566)
T 1ozh_A 481 AIQEEKKYQRLSGVEFGPMDFKAYAESF-GAKGFAVESAEALEPTLRAAMDVDGPAVV 537 (566)
T ss_dssp HHHHHHHHSSCCSCBCCCCCHHHHHHTT-TSEEEECCSGGGHHHHHHHHHHSSSCEEE
T ss_pred HHHHHHhcCCCccCcCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEE
Confidence 0 001 11122223445555 77777888999999999999999999988
No 72
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=65.89 E-value=11 Score=30.93 Aligned_cols=56 Identities=13% Similarity=0.071 Sum_probs=37.7
Q ss_pred ChhHHHHHHHHHH-HHhcCCCeEEEEeccccC--------C--CHHHHHHHHhccCcEEEEeCCccc
Q 021963 247 GAQLSIMEQACLD-AEKEGISCELIDLKTLIP--------W--DKETVEASVRKTGRLLPRSSGYWR 302 (305)
Q Consensus 247 G~~~~~aleAa~~-L~~~Gi~~~vI~~~~i~P--------~--d~~~i~~~~~~~~~vvvvEe~~~~ 302 (305)
|.+-..+..+++. |+++|.+++++|+..+.. . +.+.+.+.+...+.||++=.-|.+
T Consensus 16 g~t~~la~~i~~~~l~~~g~~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~i~~aD~ii~~sP~y~~ 82 (197)
T 2vzf_A 16 STTAKLAEYALAHVLARSDSQGRHIHVIDLDPKALLRGDLSNAKLKEAVDATCNADGLIVATPIYKA 82 (197)
T ss_dssp CHHHHHHHHHHHHHHHHSSEEEEEEEGGGSCHHHHHHTCTTSHHHHHHHHHHHHCSEEEEEEECBTT
T ss_pred ChHHHHHHHHHHHHHHHCCCeEEEEEccccCchhhcccccCcHHHHHHHHHHHHCCEEEEEeCccCC
Confidence 4455666666777 888899999999876521 1 234455667788888877655543
No 73
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=65.84 E-value=4.7 Score=30.36 Aligned_cols=37 Identities=16% Similarity=0.103 Sum_probs=31.0
Q ss_pred CCcEEEEEeC----hhHHHHHHHHHHHHhcCCCeEEEEecc
Q 021963 238 GSDITLVGWG----AQLSIMEQACLDAEKEGISCELIDLKT 274 (305)
Q Consensus 238 g~dv~Iia~G----~~~~~aleAa~~L~~~Gi~~~vI~~~~ 274 (305)
..+|+|++-| +....|.+|.+.|++.|++.+.+|+..
T Consensus 15 ~~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~y~~~di~~ 55 (111)
T 3zyw_A 15 AAPCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFS 55 (111)
T ss_dssp SSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGG
T ss_pred cCCEEEEEecCCCCCcchhHHHHHHHHHHcCCCeEEEECcC
Confidence 4578888876 456789999999999999999999876
No 74
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=65.33 E-value=4.8 Score=31.69 Aligned_cols=36 Identities=19% Similarity=0.135 Sum_probs=30.7
Q ss_pred CcEEEEEeC----hhHHHHHHHHHHHHhcCCCeEEEEecc
Q 021963 239 SDITLVGWG----AQLSIMEQACLDAEKEGISCELIDLKT 274 (305)
Q Consensus 239 ~dv~Iia~G----~~~~~aleAa~~L~~~Gi~~~vI~~~~ 274 (305)
.+++|.+.| .....|.+|.+.|++.|++.+.+|+..
T Consensus 35 ~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~gv~y~~vdI~~ 74 (135)
T 2wci_A 35 NPILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQ 74 (135)
T ss_dssp CSEEEEESBCSSSBSSHHHHHHHHHHHTTCSCCEEEEGGG
T ss_pred CCEEEEEEecCCCCCCccHHHHHHHHHHcCCceEEEECCC
Confidence 468888887 567789999999999999999999875
No 75
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=64.79 E-value=19 Score=29.82 Aligned_cols=51 Identities=12% Similarity=0.151 Sum_probs=38.5
Q ss_pred HHHHHHHHHHhcCCCeEEEEeccccC---CCHHHHHHHHhccCcEEEEeCCccc
Q 021963 252 IMEQACLDAEKEGISCELIDLKTLIP---WDKETVEASVRKTGRLLPRSSGYWR 302 (305)
Q Consensus 252 ~aleAa~~L~~~Gi~~~vI~~~~i~P---~d~~~i~~~~~~~~~vvvvEe~~~~ 302 (305)
.+...++.+++.|.+++++|+..+.| .|.+.+.+.+...+.||+.=.-|+.
T Consensus 18 l~~~l~~~~~~~g~ev~~~dL~~~~~~~~~dv~~~~~~l~~AD~iv~~~P~y~~ 71 (192)
T 3f2v_A 18 VHKHWSDAVRQHTDRFTVHELYAVYPQGKIDVAAEQKLIETHDSLVWQFPIYWF 71 (192)
T ss_dssp HHHHHHHHHTTCTTTEEEEEHHHHCTTCCCCHHHHHHHHHTSSSEEEEEECBTT
T ss_pred HHHHHHHHHHhCCCeEEEEEchhcCCCCchhHHHHHHHHHhCCEEEEEcChhhc
Confidence 34445566777799999999998775 5667777888899999987666553
No 76
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=63.94 E-value=16 Score=31.11 Aligned_cols=56 Identities=7% Similarity=0.011 Sum_probs=38.6
Q ss_pred ChhHHHHHHHHHHHHhc-CCCeEEEEeccccC---------------------CCHHHHHHHHhccCcEEEEeCCccc
Q 021963 247 GAQLSIMEQACLDAEKE-GISCELIDLKTLIP---------------------WDKETVEASVRKTGRLLPRSSGYWR 302 (305)
Q Consensus 247 G~~~~~aleAa~~L~~~-Gi~~~vI~~~~i~P---------------------~d~~~i~~~~~~~~~vvvvEe~~~~ 302 (305)
|.+...+..+++.|++. |.+++++|+..+.+ -|.+.+.+.+...+.||+.=.-|.+
T Consensus 15 s~T~~la~~i~~~l~~~~g~~v~~~dl~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~l~~AD~iI~~sP~y~~ 92 (242)
T 1sqs_A 15 SKTLEYTKRLSSIISSRNNVDISFRTPFNSELEISNSDSEELFKKGIDRQSNADDGGVIKKELLESDIIIISSPVYLQ 92 (242)
T ss_dssp CHHHHHHHHHHHHHHHHSCCEEEEECTTTCCCCCCCCCHHHHHHHCCCSSTTTSTHHHHHHHHHHCSEEEEEEEECSS
T ss_pred ChHHHHHHHHHHHHHHhcCCeEEEEEcccCCCCCCCchHHhhccCCCCccchHHHHHHHHHHHHHCCEEEEEcccccc
Confidence 44556666677888877 99999999886431 2345566777888888876555443
No 77
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=63.92 E-value=10 Score=37.32 Aligned_cols=112 Identities=13% Similarity=0.028 Sum_probs=63.7
Q ss_pred CCcEEecch-hHH-HHHHHHHHHHhCC-CeEEEEecccchH-HhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCC--
Q 021963 85 KSRVFNTPL-CEQ-GIVGFAIGLAAMG-NRAIAEIQFADYI-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV-- 158 (305)
Q Consensus 85 p~r~~~~gI-aE~-~~v~~AaGlA~~G-~~p~~~~~~~~F~-~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~-- 158 (305)
|.+|++.|- .=. ..++.|.|+|++- -++++++ .++.. +..+..+. .++..+ +|+ .+|+...++..
T Consensus 432 ~~~~~~~g~~G~~G~~l~~AiGaala~~~~~vv~i-~GDGs~~~~~~~L~-ta~~~~------l~~-~ivv~NN~~~~~~ 502 (616)
T 2pan_A 432 DRHWINCGQAGPLGWTIPAALGVCAADPKRNVVAI-SGDFDFQFLIEELA-VGAQFN------IPY-IHVLVNNAYLGLI 502 (616)
T ss_dssp TTSEEECTTTCCTTCHHHHHHHHHHHCTTCEEEEE-EEHHHHHHTGGGHH-HHHHTT------CCC-EEEEEECSBCHHH
T ss_pred CCeEEcCCCcccccchHHHHHHHHHhCCCCcEEEE-EcchhhhCCHHHHH-HHHHhC------CCe-EEEEEECCcchHH
Confidence 677888653 222 3778889988863 3566665 56632 22233333 233333 455 45554433221
Q ss_pred --------CC-------CCC---CC--CchHH-HHHccCCCcEEEeeCCHHHHHHHHHHhHh----CCCCEEE
Q 021963 159 --------GH-------GGH---YH--SQSPE-AFFCHVPGLKVVIPRSPRQAKGLLLSCIR----DPNPVVF 206 (305)
Q Consensus 159 --------~~-------~g~---~h--s~~d~-a~~~~iP~l~V~~P~d~~e~~~~l~~a~~----~~~Pv~i 206 (305)
+. .+. .| ..-|. .+.+.+ |+..+...+++|+...++++++ .++|++|
T Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~~~~~gp~lI 574 (616)
T 2pan_A 503 RQSQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGL-GCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVV 574 (616)
T ss_dssp HHHGGGGTCCCSCBCCCCCTTCGGGTTCCCCHHHHHHHT-TCEEEEECSGGGHHHHHHHHHHHHHHHCSCEEE
T ss_pred HHHHHHhcCCccccccccccccccCCCCCCCHHHHHHHc-CCeEEEECCHHHHHHHHHHHHhhcccCCCcEEE
Confidence 00 011 01 01233 344554 6677777899999999999998 7899998
No 78
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=63.06 E-value=11 Score=35.19 Aligned_cols=57 Identities=11% Similarity=0.082 Sum_probs=42.0
Q ss_pred EEEEeChhH----HHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccCcEEEEeC
Q 021963 242 TLVGWGAQL----SIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLPRSS 298 (305)
Q Consensus 242 ~Iia~G~~~----~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvEe 298 (305)
++|.|++|. ..|...++.|+++|+++.++++..+..-|...+.+.+.+++.+++--.
T Consensus 268 v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~~~~~d~~~~~~s~i~~~i~~~~~ivlGsp 328 (410)
T 4dik_A 268 VTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKFSDEERPAISEILKDIPDSEALIFGVS 328 (410)
T ss_dssp EEEEEECSSSHHHHHHHHHHHHHHHTTCEEEEEEECSSCCCCHHHHHHHSTTCSEEEEEEC
T ss_pred eeeEEecccChHHHHHHHHHHHHHhcCCceEEEEeccCCCCCHHHHHHHHHhCCeEEEEeC
Confidence 445555554 556666778888999999999988888787777777778877776433
No 79
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=62.82 E-value=7.1 Score=29.87 Aligned_cols=43 Identities=16% Similarity=0.149 Sum_probs=36.7
Q ss_pred hhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccC
Q 021963 248 AQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTG 291 (305)
Q Consensus 248 ~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~ 291 (305)
.....|.+|.+.|++.|++.+++|+.. .|.+.+.|.+.+++.+
T Consensus 12 p~C~~c~ka~~~L~~~gi~~~~~di~~-~~~t~~eL~~~l~~~g 54 (119)
T 3f0i_A 12 PKCSKSRETLALLENQGIAPQVIKYLE-TSPSVEELKRLYQQLG 54 (119)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEEECHHH-HCCCHHHHHHHHHHHT
T ss_pred CCChHHHHHHHHHHHcCCceEEEEecc-CcCcHHHHHHHHHHcC
Confidence 446789999999999999999999987 7899999888877654
No 80
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=62.50 E-value=19 Score=31.22 Aligned_cols=52 Identities=15% Similarity=-0.009 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEeccccCCC---------HHHHHHHHhccCcEEEEeCCccc
Q 021963 250 LSIMEQACLDAEKEGISCELIDLKTLIPWD---------KETVEASVRKTGRLLPRSSGYWR 302 (305)
Q Consensus 250 ~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d---------~~~i~~~~~~~~~vvvvEe~~~~ 302 (305)
...+..+++.+++.|++++++|+..+ |+. .+.+.+.+...+.||++-.-|.+
T Consensus 51 ~~La~~~~~~l~~~g~eve~idL~~~-pl~~~d~~~~d~~~~l~~~i~~AD~iI~~sP~Yn~ 111 (247)
T 2q62_A 51 RLLAEEARRLLEFFGAEVKVFDPSGL-PLPDAAPVSHPKVQELRELSIWSEGQVWVSPERHG 111 (247)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCTTC-CCTTSSCTTSHHHHHHHHHHHHCSEEEEEEECSSS
T ss_pred HHHHHHHHHHHhhCCCEEEEEEhhcC-CCCcCCCCCCHHHHHHHHHHHHCCEEEEEeCCCCC
Confidence 34555566778778999999999885 432 35566778888888887665544
No 81
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=62.37 E-value=24 Score=35.44 Aligned_cols=101 Identities=12% Similarity=0.058 Sum_probs=58.4
Q ss_pred HHHHHHHHHhCC---------------CeEEEEecccchH-H--hHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCC
Q 021963 98 IVGFAIGLAAMG---------------NRAIAEIQFADYI-F--PAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVG 159 (305)
Q Consensus 98 ~v~~AaGlA~~G---------------~~p~~~~~~~~F~-~--ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~ 159 (305)
.++.|.|+|++- -+.++++ .++-- + .+++.+. .++..+ ++. .+++....+..-
T Consensus 145 gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~v~~i-~GDG~l~eG~~~Eal~-~A~~~~------L~~-livI~dnN~~~i 215 (690)
T 3m49_A 145 GIATAVGMAMAERHLAAKYNRDAYNIVDHYTYAI-CGDGDLMEGVSAEASS-LAAHLQ------LGR-LVVLYDSNDISL 215 (690)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBTTBCCSCCCEEEE-ECHHHHHSHHHHHHHH-HHHHTT------CTT-EEEEEEECSBCS
T ss_pred cHHHHHHHHHHHHHhhccccccccccCCCeEEEE-ECchhhhhccHHHHHH-HHHHhC------CCe-EEEEEECCCeec
Confidence 356667776642 2334443 55532 3 4566654 344444 343 344444444322
Q ss_pred CCCCCCC-chHH-HHHccCCCcEEEee---CCHHHHHHHHHHhHh-CCCCEEEec
Q 021963 160 HGGHYHS-QSPE-AFFCHVPGLKVVIP---RSPRQAKGLLLSCIR-DPNPVVFFE 208 (305)
Q Consensus 160 ~~g~~hs-~~d~-a~~~~iP~l~V~~P---~d~~e~~~~l~~a~~-~~~Pv~i~~ 208 (305)
.+..... .+|+ ..+++. |+.++.+ .|.+++..+++.+.+ .++|++|..
T Consensus 216 ~~~~~~~~~~d~~~~~~a~-G~~~~~v~DG~d~~~l~~Al~~a~~~~~~P~lI~v 269 (690)
T 3m49_A 216 DGDLNRSFSESVEDRYKAY-GWQVIRVEDGNDIEAIAKAIEEAKADEKRPTLIEV 269 (690)
T ss_dssp SSBGGGTCCCCHHHHHHHH-TCEEEEESCTTCHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred ccchhhccchhHHHHHHHc-CCcEEEEecCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 2221111 2344 455666 8888888 789999999999998 689999954
No 82
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=61.55 E-value=20 Score=34.62 Aligned_cols=111 Identities=14% Similarity=0.151 Sum_probs=62.1
Q ss_pred CCcEEecch-hH-HHHHHHHHHHHhCCCeEEEEecccc--hHHhHHHHHHHHHhhcccccCCCcccceeEEEcCCcC-CC
Q 021963 85 KSRVFNTPL-CE-QGIVGFAIGLAAMGNRAIAEIQFAD--YIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA-VG 159 (305)
Q Consensus 85 p~r~~~~gI-aE-~~~v~~AaGlA~~G~~p~~~~~~~~--F~~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~-~~ 159 (305)
|.++++.|. .- -..++.|.|++++.-++++++ .++ |.+. +..+. .+...+ +|+ .+|+..-+|. ..
T Consensus 411 p~~~~~~g~~g~~G~~l~~AiGaa~a~~~~vv~i-~GDGsf~~~-~~el~-ta~~~~------l~~-~ivv~NN~~~~~~ 480 (564)
T 2q28_A 411 PRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAI-EGDSAFGFS-GMEIE-TICRYN------LPV-TIVIFNNGGIYRG 480 (564)
T ss_dssp SSCEEESTTTTCTTCHHHHHHHHHHHHCSCEEEE-EEHHHHHTT-GGGHH-HHHHTT------CCE-EEEEEECSBSSCS
T ss_pred CCeEecCCCCCcccchHHHHHHHhhcCCCcEEEE-EcchHhhcc-HHHHH-HHHHhC------CCe-EEEEEeCchhHHH
Confidence 777776543 11 235788888887633555554 555 3322 22232 233333 465 5555544432 11
Q ss_pred C------CCCCC-----CchHH-HHHccCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 021963 160 H------GGHYH-----SQSPE-AFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (305)
Q Consensus 160 ~------~g~~h-----s~~d~-a~~~~iP~l~V~~P~d~~e~~~~l~~a~~~~~Pv~i 206 (305)
. ++... ...|. .+.+.+ |+..+...+++|+...++++++.++|++|
T Consensus 481 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~~p~li 538 (564)
T 2q28_A 481 DGVDLSGAGAPSPTDLLHHARYDKLMDAF-RGVGYNVTTTDELRHALTTGIQSRKPTII 538 (564)
T ss_dssp CCCCTTSSCCCCTTBCCTTCCGGGGGGGG-TCEEEEECSHHHHHHHHHHHHHHTSCEEE
T ss_pred HHHHHhccCCccccccCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEE
Confidence 1 01000 01232 233444 67777889999999999999988899988
No 83
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=60.57 E-value=14 Score=29.94 Aligned_cols=55 Identities=15% Similarity=0.194 Sum_probs=35.4
Q ss_pred eChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHH-------------HHHHHHhccCcEEEEeCCcc
Q 021963 246 WGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKE-------------TVEASVRKTGRLLPRSSGYW 301 (305)
Q Consensus 246 ~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~-------------~i~~~~~~~~~vvvvEe~~~ 301 (305)
+|.+-..|..+++.|++.|++++++|+... +.+.- .+.+.+..++.||+.=.-|.
T Consensus 16 ~g~T~~la~~i~~~l~~~g~~v~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~ 83 (200)
T 2a5l_A 16 HGATAEMARQIARGVEQGGFEARVRTVPAV-STECEAVAPDIPAEGALYATLEDLKNCAGLALGSPTRF 83 (200)
T ss_dssp SSHHHHHHHHHHHHHHHTTCEEEEEBCCCE-EC-------------CCBCCHHHHHTCSEEEEEEECBT
T ss_pred CChHHHHHHHHHHHHhhCCCEEEEEEhhhc-cchhhhhccccccccCchhhHHHHHHCCEEEEEcChhc
Confidence 355556666777788888999999999875 22110 12355667777877655544
No 84
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=59.29 E-value=23 Score=35.73 Aligned_cols=101 Identities=13% Similarity=0.109 Sum_probs=57.1
Q ss_pred HHHHHHHHHhCC---------------CeEEEEecccchH-H--hHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCC
Q 021963 98 IVGFAIGLAAMG---------------NRAIAEIQFADYI-F--PAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVG 159 (305)
Q Consensus 98 ~v~~AaGlA~~G---------------~~p~~~~~~~~F~-~--ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~ 159 (305)
.+.+|.|+|++- -+.++++ .++-. + .+++.+. .++..+ ++. .+++....+..-
T Consensus 160 gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~vv~i-~GDG~l~eG~~~Eal~-~A~~~~------L~~-livI~dnN~~~i 230 (711)
T 3uk1_A 160 GLANAVGMALGEALLAAEFNRDDAKIVDHHTYVF-LGDGCLMEGISHEACS-LAGTLK------LNK-LIALYDDNGISI 230 (711)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEE-ECHHHHHSHHHHHHHH-HHHHTT------CTT-EEEEEEECSEET
T ss_pred HHHHHHHHHHHHHhhcccccccccccCCCeEEEE-ECCcchhhccHHHHHH-HHHHhC------CCc-EEEEEECCCccc
Confidence 356667776642 1345554 56642 3 4566654 355444 443 344444433221
Q ss_pred CCCCCC-CchHH-HHHccCCCcEEEee---CCHHHHHHHHHHhHhCCCCEEEec
Q 021963 160 HGGHYH-SQSPE-AFFCHVPGLKVVIP---RSPRQAKGLLLSCIRDPNPVVFFE 208 (305)
Q Consensus 160 ~~g~~h-s~~d~-a~~~~iP~l~V~~P---~d~~e~~~~l~~a~~~~~Pv~i~~ 208 (305)
.+.... ..+|+ ..+++. |+.++.| .|.+++..+++++.+.++|++|..
T Consensus 231 ~~~~~~~~~~d~~~~~~a~-G~~~~~~vdG~d~~~l~~Al~~A~~~~~P~lI~v 283 (711)
T 3uk1_A 231 DGDVVNWFHDDTPKRFEAY-GWNVIPNVNGHDVDAIDAAIAKAKRSDKPSLICC 283 (711)
T ss_dssp TEEGGGTCCCCHHHHHHHT-TCEEEEEEETTCHHHHHHHHHHHTTCSSCEEEEE
T ss_pred ccchhhhcCCCHHHHHHHc-CCcEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 111111 12343 456666 7777765 488999999999988899999954
No 85
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=59.00 E-value=22 Score=28.76 Aligned_cols=56 Identities=13% Similarity=0.110 Sum_probs=37.6
Q ss_pred ChhHHHHHHHHHHHHhc------CCCeEEEEecc--ccCCCH--------------------HHHHHHHhccCcEEEEeC
Q 021963 247 GAQLSIMEQACLDAEKE------GISCELIDLKT--LIPWDK--------------------ETVEASVRKTGRLLPRSS 298 (305)
Q Consensus 247 G~~~~~aleAa~~L~~~------Gi~~~vI~~~~--i~P~d~--------------------~~i~~~~~~~~~vvvvEe 298 (305)
|.+...+...++.|++. |.+++++|+.. +.|++. +.+.+.+...+.||++=.
T Consensus 14 ~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~iI~~sP 93 (191)
T 1t0i_A 14 RVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQQIALPLYEDDDELIPAQIKSVDEYADSKTRSWSRIVNALDIIVFVTP 93 (191)
T ss_dssp CSHHHHHHHHHHHHHTCTTTTTTTCEEEEECHHHHCCCSSCCCCCSCGGGCCSGGGCSCHHHHHHHHHHHTCSEEEEEEE
T ss_pred CchHHHHHHHHHHHHHhhccCCCCceEEEEehhhcCCCCCCCccccccccccCcccCCcHHHHHHHHHHHhCCEEEEEec
Confidence 44555566667777765 79999999986 333322 345677788888888766
Q ss_pred Cccc
Q 021963 299 GYWR 302 (305)
Q Consensus 299 ~~~~ 302 (305)
-|.+
T Consensus 94 ~y~~ 97 (191)
T 1t0i_A 94 QYNW 97 (191)
T ss_dssp CBTT
T ss_pred eECC
Confidence 5553
No 86
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=58.86 E-value=23 Score=34.57 Aligned_cols=111 Identities=10% Similarity=0.025 Sum_probs=61.4
Q ss_pred CCcEEe---cchhHHHHHHHHHHHHhCC-CeEEEEecccchH-HhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCC-
Q 021963 85 KSRVFN---TPLCEQGIVGFAIGLAAMG-NRAIAEIQFADYI-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV- 158 (305)
Q Consensus 85 p~r~~~---~gIaE~~~v~~AaGlA~~G-~~p~~~~~~~~F~-~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~- 158 (305)
|.+|+. +|.- -..++.|.|+|++- -++++++ .++.. +..++.+. .++..+ +|+ .+|+..-++..
T Consensus 403 ~~~~~~~~~~g~m-G~~l~~AiGaala~~~~~vv~i-~GDG~~~~~~~~L~-ta~~~~------l~~-~ivv~NN~~~~~ 472 (590)
T 1v5e_A 403 KNMWRTSPLFATM-GIAIPGGLGAKNTYPDRQVWNI-IGDGAFSMTYPDVV-TNVRYN------MPV-INVVFSNTEYAF 472 (590)
T ss_dssp TSEEECCCSSCCT-TCHHHHHHHHHHHCTTSCEEEE-EEHHHHHHHGGGHH-HHHHTT------CCC-EEEEEECSSCTT
T ss_pred CCeEEcCCCCCcc-cChHHHHHHHHHhCCCCeEEEE-EechHHhchHHHHH-HHHHhC------CCC-EEEEEECCchHH
Confidence 667774 2222 24567888888762 3555564 56632 22233333 233333 465 55554432221
Q ss_pred -C-C-CC-------C-CCCchHHHHHccCCCcEEEeeCCHHHHHHHHHHhHhC---CCCEEE
Q 021963 159 -G-H-GG-------H-YHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRD---PNPVVF 206 (305)
Q Consensus 159 -~-~-~g-------~-~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a~~~---~~Pv~i 206 (305)
. . .. + .+..+-..+.+++ |+..+...+++|+...++++++. ++|++|
T Consensus 473 ~~~~q~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~~~~gp~li 533 (590)
T 1v5e_A 473 IKNKYEDTNKNLFGVDFTDVDYAKIAEAQ-GAKGFTVSRIEDMDRVMAEAVAANKAGHTVVI 533 (590)
T ss_dssp GGGTTSSSCCSCCCCCCCCCCHHHHHHHT-TSEEEEECBHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHhcCCCccccCCCCCHHHHHHHc-CCEEEEECCHHHHHHHHHHHHHhcCCCCCEEE
Confidence 1 0 00 1 1112222344444 66777778999999999999987 899988
No 87
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=57.98 E-value=48 Score=32.90 Aligned_cols=98 Identities=12% Similarity=0.072 Sum_probs=59.0
Q ss_pred CCchHHH-----HHccCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEEecccc-ccccCccCCCCCC--Cccc---CCceE
Q 021963 165 HSQSPEA-----FFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKW-LYRLSVEEVPEDD--YMLP---LSEAE 233 (305)
Q Consensus 165 hs~~d~a-----~~~~iP~l~V~~P~d~~e~~~~l~~a~~~~~Pv~i~~~~~-l~~~~~~~~~~~~--~~~~---~gk~~ 233 (305)
|+..|+- .++.+|.. |+.|.|.+|+..++++|-+++-|++.+-... +.-...+...... -.+. ..+..
T Consensus 189 ~s~~d~~~~~~g~~~~~P~a-VV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIl 267 (658)
T 4bby_A 189 HCLHEIFLLREGMFERIPDI-VLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRIL 267 (658)
T ss_dssp SCHHHHHHHHSSCCSCCCSE-EEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEE
T ss_pred CCHHHHHHHhCCcccCCcCE-EEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcE
Confidence 3555653 24567876 9999999999999999999999999853211 1111111000000 0111 22333
Q ss_pred EeeeCCcEEEEEeChhHHHHHHHHHHHHhcCCC
Q 021963 234 VIREGSDITLVGWGAQLSIMEQACLDAEKEGIS 266 (305)
Q Consensus 234 ~~~~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~ 266 (305)
-+.+.+..+.|-.|.......+++ ++.|..
T Consensus 268 eiD~~~~~atVeaGv~~~~L~~~L---~~~Gl~ 297 (658)
T 4bby_A 268 WVDENNLTAHVEAGITGQELERQL---KESGYC 297 (658)
T ss_dssp EEETTTTEEEEETTCBHHHHHHHH---HHHTEE
T ss_pred EEcCCCCEEEEecCchHHHHHHHH---HHcCCc
Confidence 344566788889999888776654 455643
No 88
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=57.42 E-value=34 Score=32.81 Aligned_cols=99 Identities=11% Similarity=-0.015 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhCC-CeEEEEecccchH-HhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCC------CCCC---CCC
Q 021963 97 GIVGFAIGLAAMG-NRAIAEIQFADYI-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV------GHGG---HYH 165 (305)
Q Consensus 97 ~~v~~AaGlA~~G-~~p~~~~~~~~F~-~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~------~~~g---~~h 165 (305)
..++.|.|+|++. -++++++ .++.. +..+..+.. ++..+ +|+ .+|+...++.. +... ..+
T Consensus 412 ~~l~~A~G~a~a~~~~~vv~~-~GDG~~~~~~~el~t-a~~~~------l~~-~ivv~nN~~~~~~~~~~~~~~~~~~~~ 482 (552)
T 1ovm_A 412 YTLAAAFGAQTACPNRRVIVL-TGDGAAQLTIQELGS-MLRDK------QHP-IILVLNNEGYTVERAIHGAEQRYNDIA 482 (552)
T ss_dssp HHHHHHHHHHHHCTTSCEEEE-EEHHHHHHHTTHHHH-HHHTT------CCC-EEEEEESSSCHHHHHHSCTTCGGGCCC
T ss_pred hHHHHHHHHHHhCCCCcEEEE-ECchHHHhHHHHHHH-HHHhC------CCC-EEEEEECCCCeEEEeeccCCCCcccCC
Confidence 4568888888763 3555554 56632 222333332 33333 465 55544433321 1111 011
Q ss_pred CchHH-HHHccCCCc----EEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 021963 166 SQSPE-AFFCHVPGL----KVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (305)
Q Consensus 166 s~~d~-a~~~~iP~l----~V~~P~d~~e~~~~l~~a~~~~~Pv~i 206 (305)
. .|. .+.+.+ |+ ..+...+.+|+...++++++.++|++|
T Consensus 483 ~-~d~~~~a~a~-G~~~~~~~~~v~~~~~l~~al~~a~~~~gp~li 526 (552)
T 1ovm_A 483 L-WNWTHIPQAL-SLDPQSECWRVSEAEQLADVLEKVAHHERLSLI 526 (552)
T ss_dssp C-CCGGGSTTTS-CSSCCEEEEEECBHHHHHHHHHHHTTCSSEEEE
T ss_pred C-CCHHHHHHHh-CCCcCCCEEEeCCHHHHHHHHHHHHhCCCCEEE
Confidence 1 233 233333 66 777788999999999999988999988
No 89
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=57.37 E-value=21 Score=29.62 Aligned_cols=49 Identities=12% Similarity=0.201 Sum_probs=38.1
Q ss_pred HHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccCcEEEEeCCccc
Q 021963 252 IMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLPRSSGYWR 302 (305)
Q Consensus 252 ~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvEe~~~~ 302 (305)
.+..+++.+++.|.+++++|+.. +.|.+.+.+.+...+.||+.=.-|+.
T Consensus 35 l~~~~~~~~~~~g~~v~~~dL~~--~~d~~~~~~~l~~AD~iV~~~P~y~~ 83 (204)
T 2amj_A 35 LTEVADGTLRDLGHDVRIVRADS--DYDVKAEVQNFLWADVVIWQMPGWWM 83 (204)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSS--CCCHHHHHHHHHHCSEEEEEEECBTT
T ss_pred HHHHHHHHHHHcCCEEEEEeCCc--cccHHHHHHHHHhCCEEEEECCcccc
Confidence 44455667777799999999975 67888888889999999987666553
No 90
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=56.76 E-value=21 Score=31.58 Aligned_cols=52 Identities=13% Similarity=-0.068 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHHHhcCCCeEEEEeccccC-------CC--HHHHHHHHhccCcEEEEeCCc
Q 021963 249 QLSIMEQACLDAEKEGISCELIDLKTLIP-------WD--KETVEASVRKTGRLLPRSSGY 300 (305)
Q Consensus 249 ~~~~aleAa~~L~~~Gi~~~vI~~~~i~P-------~d--~~~i~~~~~~~~~vvvvEe~~ 300 (305)
+...+..+++.+++.|++++++|+.-+.. .+ .+.+.+.+...+.+|++-.-|
T Consensus 74 T~~La~~~~~~l~~~G~eveiidL~dlpl~~~d~~~~~d~v~~l~e~I~~ADgiV~aSP~Y 134 (279)
T 2fzv_A 74 SRLAVEEAARLLQFFGAETRIFDPSDLPLPDQVQSDDHPAVKELRALSEWSEGQVWCSPER 134 (279)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEBCCTTCCCTTTSGGGCCHHHHHHHHHHHHCSEEEEEEEEE
T ss_pred HHHHHHHHHHHHhhCCCEEEEEehhcCCCCccCccCCCHHHHHHHHHHHHCCeEEEEcCcc
Confidence 34555567778887899999999988641 22 344667777788888765443
No 91
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=56.26 E-value=28 Score=33.28 Aligned_cols=112 Identities=14% Similarity=0.096 Sum_probs=61.4
Q ss_pred CCcEEecc-hhHHHHHHHHHHHHhCC-CeEEEEecccchH-HhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCC--C
Q 021963 85 KSRVFNTP-LCEQGIVGFAIGLAAMG-NRAIAEIQFADYI-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV--G 159 (305)
Q Consensus 85 p~r~~~~g-IaE~~~v~~AaGlA~~G-~~p~~~~~~~~F~-~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~--~ 159 (305)
|.+|+..+ -.=-..++.|.|+|++- -++++++ .++.. +..++.+. .++..+ +|+ .+|+...++.. .
T Consensus 392 ~~~~~~~~gg~~G~~l~~A~G~a~a~~~~~vv~~-~GDG~~~~~~~~l~-~a~~~~------l~~-~ivv~nN~~~~~~~ 462 (528)
T 1q6z_A 392 PGSYYFCAAGGLGFALPAAIGVQLAEPERQVIAV-IGDGSANYSISALW-TAAQYN------IPT-IFVIMNNGTYGALR 462 (528)
T ss_dssp SSCEEECTTCCTTSHHHHHHHHHHHCTTSCEEEE-EEHHHHTTTGGGHH-HHHHHT------CCC-EEEEEECSBCHHHH
T ss_pred CCcEECCCCccccchHHHHHHHHHhCCCCcEEEE-ECCcHHHhhHHHHH-HHHHhC------CCe-EEEEEeCCcchHhH
Confidence 56676532 11124567888888763 3566664 55532 22233333 233333 455 55544333221 0
Q ss_pred ------CC----CC-CCCchHHHHHccCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 021963 160 ------HG----GH-YHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (305)
Q Consensus 160 ------~~----g~-~hs~~d~a~~~~iP~l~V~~P~d~~e~~~~l~~a~~~~~Pv~i 206 (305)
.. +. .+..+-..+.+.+ |+..+...+++|+...++++++.++|++|
T Consensus 463 ~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~li 519 (528)
T 1q6z_A 463 WFAGVLEAENVPGLDVPGIDFRALAKGY-GVQALKADNLEQLKGSLQEALSAKGPVLI 519 (528)
T ss_dssp HHHHHHTCCSCCSCBCCCCCHHHHHHHH-TCEEEEESSHHHHHHHHHHHHTCSSCEEE
T ss_pred HHHHHhcCCCcccCCCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHHCCCcEEE
Confidence 00 11 1222222344444 66777788999999999999999999998
No 92
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=55.95 E-value=23 Score=26.55 Aligned_cols=47 Identities=11% Similarity=0.188 Sum_probs=30.8
Q ss_pred ChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccCcEEEEeCCc
Q 021963 247 GAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLPRSSGY 300 (305)
Q Consensus 247 G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvEe~~ 300 (305)
|.+-..|...++.|++.|++++++++... |.+ .+.+++.+++.=.-|
T Consensus 11 GnT~~~a~~i~~~l~~~g~~v~~~~~~~~---~~~----~l~~~d~vi~g~p~y 57 (137)
T 2fz5_A 11 GNTEAMANEIEAAVKAAGADVESVRFEDT---NVD----DVASKDVILLGCPAM 57 (137)
T ss_dssp SHHHHHHHHHHHHHHHTTCCEEEEETTSC---CHH----HHHTCSEEEEECCCB
T ss_pred ChHHHHHHHHHHHHHhCCCeEEEEEcccC---CHH----HHhcCCEEEEEcccc
Confidence 45555666666777777999999987653 332 245667777765544
No 93
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=55.12 E-value=19 Score=30.18 Aligned_cols=55 Identities=18% Similarity=0.230 Sum_probs=37.9
Q ss_pred CCcEEEEEeChhH----HHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccCcEEE
Q 021963 238 GSDITLVGWGAQL----SIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLP 295 (305)
Q Consensus 238 g~dv~Iia~G~~~----~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvv 295 (305)
|+++++|.|++.. .....+.+.|++.|+++.++++.. -+.+.+.+.+.+.+.|++
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~---~~~~~~~~~l~~ad~I~l 85 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIAT---ESLGEITTKLRKNDFIYV 85 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTT---SCHHHHHHHHHHSSEEEE
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecC---CChHHHHHHHHhCCEEEE
Confidence 6789999988752 244455566777799988888766 355555566777776664
No 94
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=54.95 E-value=18 Score=28.20 Aligned_cols=49 Identities=12% Similarity=-0.032 Sum_probs=35.2
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCC-CHHHHHH
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPW-DKETVEA 285 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~-d~~~i~~ 285 (305)
+..++++||-|+...-.+..++.|.+.|.++.++-.++-.-+ -.+.+.+
T Consensus 17 ~~~~~llIaGG~GiaPl~sm~~~l~~~~~~v~l~g~R~~~~~~~~~el~~ 66 (142)
T 3lyu_A 17 KFGKILAIGAYTGIVEVYPIAKAWQEIGNDVTTLHVTFEPMVILKEELEK 66 (142)
T ss_dssp CCSEEEEEEETTHHHHHHHHHHHHHHTTCEEEEEEEEEGGGCCSHHHHHT
T ss_pred CCCeEEEEECcCcHHHHHHHHHHHHhcCCcEEEEEeCCHHHhhHHHHHHH
Confidence 346899999999998888888888878888888844544332 2344543
No 95
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=54.48 E-value=24 Score=25.47 Aligned_cols=56 Identities=11% Similarity=0.063 Sum_probs=38.2
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhc-----cCcEEEEeCC
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRK-----TGRLLPRSSG 299 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~-----~~~vvvvEe~ 299 (305)
.+|+|.+. +.-..|.+|.+.|++.|++.+.+|+.. |.+...+..+. +=..|++.++
T Consensus 4 a~I~vYs~-~~Cp~C~~aK~~L~~~gi~y~~idi~~----d~~~~~~~~~~~~G~~tVP~I~i~Dg 64 (92)
T 2lqo_A 4 AALTIYTT-SWCGYCLRLKTALTANRIAYDEVDIEH----NRAAAEFVGSVNGGNRTVPTVKFADG 64 (92)
T ss_dssp SCEEEEEC-TTCSSHHHHHHHHHHTTCCCEEEETTT----CHHHHHHHHHHSSSSSCSCEEEETTS
T ss_pred CcEEEEcC-CCCHhHHHHHHHHHhcCCceEEEEcCC----CHHHHHHHHHHcCCCCEeCEEEEeCC
Confidence 35677665 556789999999999999999999865 55554443332 2245666554
No 96
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=54.04 E-value=28 Score=26.37 Aligned_cols=32 Identities=13% Similarity=0.061 Sum_probs=24.7
Q ss_pred CCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEe
Q 021963 238 GSDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (305)
Q Consensus 238 g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~ 272 (305)
+..++|+++|.+.. ..++.|.++|.++.++|.
T Consensus 6 ~~~v~I~G~G~iG~---~la~~L~~~g~~V~~id~ 37 (141)
T 3llv_A 6 RYEYIVIGSEAAGV---GLVRELTAAGKKVLAVDK 37 (141)
T ss_dssp CCSEEEECCSHHHH---HHHHHHHHTTCCEEEEES
T ss_pred CCEEEEECCCHHHH---HHHHHHHHCCCeEEEEEC
Confidence 45799999988543 456678888999999985
No 97
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=54.02 E-value=33 Score=33.32 Aligned_cols=29 Identities=3% Similarity=-0.097 Sum_probs=26.5
Q ss_pred CcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 021963 178 GLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (305)
Q Consensus 178 ~l~V~~P~d~~e~~~~l~~a~~~~~Pv~i 206 (305)
|+.-+...+++|+...++++++.++|++|
T Consensus 526 G~~~~~v~~~~el~~al~~a~~~~gp~li 554 (578)
T 3lq1_A 526 DADYHEAKSVDELEEAIDKASYHKGLDII 554 (578)
T ss_dssp TCEEEECCSHHHHHHHHHHHTTSSSEEEE
T ss_pred CCceEecCCHHHHHHHHHHHHhCCCCEEE
Confidence 67778889999999999999999999998
No 98
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=53.31 E-value=16 Score=28.72 Aligned_cols=48 Identities=10% Similarity=0.027 Sum_probs=37.7
Q ss_pred EEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhcc
Q 021963 241 ITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKT 290 (305)
Q Consensus 241 v~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~ 290 (305)
++|.+. .....|.+|.+.|++.|++.+++|+.. .|...+.+.+.+.+.
T Consensus 4 itiY~~-p~C~~crkak~~L~~~gi~~~~idi~~-~~~~~~eL~~~~~~~ 51 (141)
T 1s3c_A 4 ITIYHN-PASGTSRNTLEMIRNSGTEPTIILYLE-NPPSRDELVKLIADM 51 (141)
T ss_dssp CEEECC-TTCHHHHHHHHHHHHTTCCCEEECTTT-SCCCHHHHHHHHHHH
T ss_pred EEEEEC-CCChHHHHHHHHHHHcCCCEEEEECCC-CCccHHHHHHHhccc
Confidence 344333 456889999999999999999999986 688888887776654
No 99
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=52.91 E-value=10 Score=37.19 Aligned_cols=29 Identities=17% Similarity=0.071 Sum_probs=25.2
Q ss_pred CcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 021963 178 GLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (305)
Q Consensus 178 ~l~V~~P~d~~e~~~~l~~a~~~~~Pv~i 206 (305)
|+..+...+++|+...++++++.++|++|
T Consensus 546 G~~~~~v~~~~el~~al~~a~~~~gp~li 574 (604)
T 2x7j_A 546 GGTYSCPASWDEFKTAYAPQADKPGLHLI 574 (604)
T ss_dssp TCEEECCSSHHHHHHHCCCCCSSCCEEEE
T ss_pred CCeEEecCCHHHHHHHHHHHHhCCCCEEE
Confidence 67888889999999999888888889888
No 100
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=52.80 E-value=15 Score=35.64 Aligned_cols=112 Identities=10% Similarity=-0.063 Sum_probs=62.0
Q ss_pred CCcEEec-chhH-HHHHHHHHHHHhCC-CeEEEEecccchH-HhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCC--
Q 021963 85 KSRVFNT-PLCE-QGIVGFAIGLAAMG-NRAIAEIQFADYI-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV-- 158 (305)
Q Consensus 85 p~r~~~~-gIaE-~~~v~~AaGlA~~G-~~p~~~~~~~~F~-~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~-- 158 (305)
|.+|+.. |..- -..++.|.|+|++. -++++++ .++.. +..+..+. .++..+ +|+ .+|+...++..
T Consensus 426 ~~~~~~~~g~g~mG~~l~~AiGaa~a~~~~~vv~i-~GDG~~~~~~~~L~-~a~~~~------l~~-~ivv~NN~~~~~~ 496 (573)
T 2iht_A 426 PFGFLTSAGCSSFGYGIPAAIGAQMARPDQPTFLI-AGDGGFHSNSSDLE-TIARLN------LPI-VTVVVNNDTNGLI 496 (573)
T ss_dssp TTSEECCSSSCCTTCHHHHHHHHHHHSTTSCEEEE-EEHHHHHHTGGGHH-HHHHHT------CCC-EEEEEECSBCHHH
T ss_pred CCeEEcCCCCcccccHHHHHHHHHHhCCCCcEEEE-EccHHHHhHHHHHH-HHHHhC------CCe-EEEEEECCcchhh
Confidence 6677764 2111 23668888888763 3555554 55532 22233232 233333 455 45544433221
Q ss_pred CC------C---C--CCCCchHH-HHHccCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 021963 159 GH------G---G--HYHSQSPE-AFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (305)
Q Consensus 159 ~~------~---g--~~hs~~d~-a~~~~iP~l~V~~P~d~~e~~~~l~~a~~~~~Pv~i 206 (305)
.. + + ......|. .+...+ |+..+...+.+|+...++++++.++|++|
T Consensus 497 ~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~li 555 (573)
T 2iht_A 497 ELYQNIGHHRSHDPAVKFGGVDFVALAEAN-GVDATRATNREELLAALRKGAELGRPFLI 555 (573)
T ss_dssp HHHHHHHHSSCCGGGTBCCCCCHHHHHHHT-TCEEEECCSHHHHHHHHHHHHTSSSCEEE
T ss_pred HHHHHHhcCCCcCccccCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEE
Confidence 10 0 0 10111233 344555 77777889999999999999998999998
No 101
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=52.66 E-value=20 Score=27.20 Aligned_cols=37 Identities=8% Similarity=0.068 Sum_probs=31.2
Q ss_pred CCcEEEEEeCh----hHHHHHHHHHHHHhcCCC-eEEEEecc
Q 021963 238 GSDITLVGWGA----QLSIMEQACLDAEKEGIS-CELIDLKT 274 (305)
Q Consensus 238 g~dv~Iia~G~----~~~~aleAa~~L~~~Gi~-~~vI~~~~ 274 (305)
..+|+|++.++ ....|.+|.+.|++.|+. .+.+|+..
T Consensus 19 ~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~vdV~~ 60 (118)
T 2wem_A 19 KDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLD 60 (118)
T ss_dssp HSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCCEEEESSS
T ss_pred cCCEEEEEecCCCCCccHHHHHHHHHHHHcCCCCCEEEEcCC
Confidence 46799999883 678899999999999995 99999863
No 102
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=52.40 E-value=22 Score=25.24 Aligned_cols=63 Identities=8% Similarity=0.045 Sum_probs=37.1
Q ss_pred cEEEEEeChhHHHH------HHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHh---ccCcEEEEeCCccccC
Q 021963 240 DITLVGWGAQLSIM------EQACLDAEKEGISCELIDLKTLIPWDKETVEASVR---KTGRLLPRSSGYWRFW 304 (305)
Q Consensus 240 dv~Iia~G~~~~~a------leAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~---~~~~vvvvEe~~~~~~ 304 (305)
+++|.++- ....| .+|.+.|++.|++.+.+|+..- |-..+.+.+... .+-..|++.+...++|
T Consensus 3 ~v~ly~~~-~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~~~-~~~~~~l~~~~g~~~~~vP~ifi~g~~igG~ 74 (93)
T 1t1v_A 3 GLRVYSTS-VTGSREIKSQQSEVTRILDGKRIQYQLVDISQD-NALRDEMRTLAGNPKATPPQIVNGNHYCGDY 74 (93)
T ss_dssp CEEEEECS-SCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSC-HHHHHHHHHHTTCTTCCSCEEEETTEEEEEH
T ss_pred CEEEEEcC-CCCCchhhHHHHHHHHHHHHCCCceEEEECCCC-HHHHHHHHHHhCCCCCCCCEEEECCEEEeCH
Confidence 45555542 33445 7888899999999999999752 211223333322 1224667776665553
No 103
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=51.87 E-value=4.9 Score=31.20 Aligned_cols=40 Identities=15% Similarity=0.336 Sum_probs=29.9
Q ss_pred eeeCCcEEEEEeChhHH--HHHHHHHHHHhcCCCeEEEEecc
Q 021963 235 IREGSDITLVGWGAQLS--IMEQACLDAEKEGISCELIDLKT 274 (305)
Q Consensus 235 ~~~g~dv~Iia~G~~~~--~aleAa~~L~~~Gi~~~vI~~~~ 274 (305)
+.++.|++||++|.... .--+..+.|++.||.+++.|-..
T Consensus 58 l~~~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m~T~~ 99 (122)
T 2ab1_A 58 VEKGVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVLQTEQ 99 (122)
T ss_dssp HTTCCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEECHHH
T ss_pred hhCCCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEeCHHH
Confidence 44568999999998654 34455678899999999886543
No 104
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=50.87 E-value=23 Score=34.31 Aligned_cols=27 Identities=7% Similarity=0.201 Sum_probs=24.1
Q ss_pred EEEeeCCHHHHHHHHHHhHhC-CCCEEE
Q 021963 180 KVVIPRSPRQAKGLLLSCIRD-PNPVVF 206 (305)
Q Consensus 180 ~V~~P~d~~e~~~~l~~a~~~-~~Pv~i 206 (305)
..+...+.+|+...++++++. ++|++|
T Consensus 500 ~~~~v~~~~el~~al~~a~~~~~gp~li 527 (566)
T 2vbi_A 500 LGLKATTPKELTEAIARAKANTRGPTLI 527 (566)
T ss_dssp EEEEECSHHHHHHHHHHHHHCCSSCEEE
T ss_pred cEEEeCCHHHHHHHHHHHHhcCCCcEEE
Confidence 566678999999999999987 899998
No 105
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=50.45 E-value=22 Score=27.42 Aligned_cols=45 Identities=13% Similarity=0.015 Sum_probs=30.0
Q ss_pred eChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHh-ccCcEEEEe
Q 021963 246 WGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR-KTGRLLPRS 297 (305)
Q Consensus 246 ~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~-~~~~vvvvE 297 (305)
+|.+-..|...++.|++.|++++++++....+-+ +. +++.+++.=
T Consensus 12 tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~~~~~-------l~~~~d~ii~g~ 57 (148)
T 3f6r_A 12 TGNTESIAQKLEELIAAGGHEVTLLNAADASAEN-------LADGYDAVLFGC 57 (148)
T ss_dssp SSHHHHHHHHHHHHHHTTTCEEEEEETTTBCCTT-------TTTTCSEEEEEE
T ss_pred CchHHHHHHHHHHHHHhCCCeEEEEehhhCCHhH-------hcccCCEEEEEe
Confidence 3556666767777788889999999988764322 22 555566543
No 106
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=49.99 E-value=23 Score=27.19 Aligned_cols=46 Identities=13% Similarity=0.053 Sum_probs=30.3
Q ss_pred ChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhc-cCcEEEEeCC
Q 021963 247 GAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRK-TGRLLPRSSG 299 (305)
Q Consensus 247 G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~-~~~vvvvEe~ 299 (305)
|.+-..|...++.|++.|++++++++....|-+ +.. ++.++++=..
T Consensus 12 Gnt~~~a~~i~~~l~~~g~~v~~~~~~~~~~~~-------l~~~~d~ii~~~p~ 58 (147)
T 1f4p_A 12 GNTEYTAETIARELADAGYEVDSRDAASVEAGG-------LFEGFDLVLLGCST 58 (147)
T ss_dssp SHHHHHHHHHHHHHHHHTCEEEEEEGGGCCSTT-------TTTTCSEEEEEECE
T ss_pred CHHHHHHHHHHHHHHhcCCeeEEEehhhCCHHH-------hcCcCCEEEEEeCC
Confidence 455556666667777789999999988765422 345 6666665433
No 107
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=49.44 E-value=19 Score=29.64 Aligned_cols=36 Identities=14% Similarity=0.289 Sum_probs=26.1
Q ss_pred cEEEEE---eChhHHHHHHHHHHHHhcCCCeEEEEeccc
Q 021963 240 DITLVG---WGAQLSIMEQACLDAEKEGISCELIDLKTL 275 (305)
Q Consensus 240 dv~Iia---~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i 275 (305)
+++||. +|.+-..|..+++.|++.|.+++++|+...
T Consensus 8 kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~~ 46 (211)
T 1ydg_A 8 KLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVRET 46 (211)
T ss_dssp EEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred eEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEecccc
Confidence 444443 355566677777888888999999999875
No 108
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=48.47 E-value=66 Score=31.63 Aligned_cols=25 Identities=12% Similarity=0.072 Sum_probs=21.6
Q ss_pred eeCCHHHHHHHHHHhHhCCCCEEEe
Q 021963 183 IPRSPRQAKGLLLSCIRDPNPVVFF 207 (305)
Q Consensus 183 ~P~d~~e~~~~l~~a~~~~~Pv~i~ 207 (305)
...|.+++...++++.+.++|++|.
T Consensus 260 dG~d~~~l~~al~~A~~~~~P~lI~ 284 (629)
T 2o1x_A 260 DGHNVQELVWLLERLVDLDGPTILH 284 (629)
T ss_dssp ESSCHHHHHHHHHHHTTSSSEEEEE
T ss_pred CCcCHHHHHHHHHHHHhcCCCEEEE
Confidence 4458999999999998889999984
No 109
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=48.37 E-value=38 Score=30.79 Aligned_cols=60 Identities=15% Similarity=0.159 Sum_probs=40.9
Q ss_pred eeCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccc-------------cCCCHHHHHHHHhccCcEEEEeCC
Q 021963 236 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTL-------------IPWDKETVEASVRKTGRLLPRSSG 299 (305)
Q Consensus 236 ~~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i-------------~P~d~~~i~~~~~~~~~vvvvEe~ 299 (305)
..|+.+.|++.|..... .++.+++.|+++-++|...- ...|.+.+.+.+++.+ +|+.|-.
T Consensus 12 ~~~k~IlIlG~G~~g~~---la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~d-vI~~~~e 84 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRM---MALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISD-VVTYEFE 84 (389)
T ss_dssp CTTSEEEEECCSHHHHH---HHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCS-EEEESCC
T ss_pred CCCCEEEEECCCHHHHH---HHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCC-Eeeeccc
Confidence 35678999999985444 44555566999999986421 3356677888887654 6676643
No 110
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=48.31 E-value=12 Score=30.43 Aligned_cols=50 Identities=22% Similarity=0.302 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhcCCCeEEEEeccccCCC-----------HHHHHHHHhccCcEEEEeCCcc
Q 021963 251 SIMEQACLDAEKEGISCELIDLKTLIPWD-----------KETVEASVRKTGRLLPRSSGYW 301 (305)
Q Consensus 251 ~~aleAa~~L~~~Gi~~~vI~~~~i~P~d-----------~~~i~~~~~~~~~vvvvEe~~~ 301 (305)
..+..+++.++ .|.+++++|+..+..++ .+.+.+.+...+.||+.=.-|.
T Consensus 24 ~la~~i~~~l~-~g~~v~~~dl~~~p~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~~sP~y~ 84 (193)
T 1rtt_A 24 AALQEAIGLVP-PGMSIELADISGIPLYNEDVYALGFPPAVERFREQIRAADALLFATPEYN 84 (193)
T ss_dssp HHHHHHHTTCC-TTCEEEECCCTTCCCCCHHHHTTCCCHHHHHHHHHHHHCSEEEEECCEET
T ss_pred HHHHHHHHhcc-CCCeEEEEeHHHCCCCCccccccCCCHHHHHHHHHHHhCCEEEEEccccc
Confidence 33434444444 58899999998753332 2345566778888887655443
No 111
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=48.12 E-value=29 Score=26.70 Aligned_cols=49 Identities=14% Similarity=0.025 Sum_probs=34.1
Q ss_pred HHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhcc------------CcEEEEeCCccccC
Q 021963 252 IMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKT------------GRLLPRSSGYWRFW 304 (305)
Q Consensus 252 ~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~------------~~vvvvEe~~~~~~ 304 (305)
.|..|...|+.+||+.+.+|+.. |.+.-.+..+++ -..|++.+.+.++|
T Consensus 18 ~c~~aK~lL~~kgV~feEidI~~----d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi~~~~iGG~ 78 (121)
T 1u6t_A 18 KQQDVLGFLEANKIGFEEKDIAA----NEENRKWMRENVPENSRPATGYPLPPQIFNESQYRGDY 78 (121)
T ss_dssp HHHHHHHHHHHTTCCEEEEECTT----CHHHHHHHHHHSCGGGSCSSSSCCSCEEEETTEEEEEH
T ss_pred HHHHHHHHHHHCCCceEEEECCC----CHHHHHHHHHhccccccccCCCcCCCEEEECCEEEech
Confidence 46788889999999999999985 544433333332 35677777777664
No 112
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=46.49 E-value=11 Score=28.60 Aligned_cols=35 Identities=26% Similarity=0.278 Sum_probs=26.2
Q ss_pred eeCCcEEEEE-eChh--HHHHHHHHHHHHhcCCCeEEE
Q 021963 236 REGSDITLVG-WGAQ--LSIMEQACLDAEKEGISCELI 270 (305)
Q Consensus 236 ~~g~dv~Iia-~G~~--~~~aleAa~~L~~~Gi~~~vI 270 (305)
++|.++++++ .|.. .....+.++.+++.|+++++|
T Consensus 77 ~~G~~V~~l~d~GdP~i~~~~~~l~~~~~~~gi~v~vi 114 (117)
T 3hh1_A 77 EEGSDVALVTDAGTPAISDPGYTMASAAHAAGLPVVPV 114 (117)
T ss_dssp HTTCCEEEEEETTSCGGGSTTHHHHHHHHHTTCCEEEE
T ss_pred HCCCeEEEEecCCcCeEeccHHHHHHHHHHCCCcEEEe
Confidence 5688999999 6863 455556667777789999886
No 113
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=46.31 E-value=61 Score=31.22 Aligned_cols=27 Identities=7% Similarity=0.179 Sum_probs=23.8
Q ss_pred EEEeeCCHHHHHHHHHHhHhC-CCCEEE
Q 021963 180 KVVIPRSPRQAKGLLLSCIRD-PNPVVF 206 (305)
Q Consensus 180 ~V~~P~d~~e~~~~l~~a~~~-~~Pv~i 206 (305)
..+...+.+|+...++++++. ++|++|
T Consensus 508 ~~~~v~~~~el~~al~~a~~~~~gp~li 535 (568)
T 2wvg_A 508 KGLKAKTGGELAEAIKVALANTDGPTLI 535 (568)
T ss_dssp EEEEESBHHHHHHHHHHHHHCCSSCEEE
T ss_pred ceEEeCCHHHHHHHHHHHHhcCCCcEEE
Confidence 566668999999999999997 899998
No 114
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=46.08 E-value=24 Score=26.78 Aligned_cols=36 Identities=8% Similarity=0.089 Sum_probs=30.1
Q ss_pred CCcEEEEEeCh----hHHHHHHHHHHHHhcCCC---eEEEEec
Q 021963 238 GSDITLVGWGA----QLSIMEQACLDAEKEGIS---CELIDLK 273 (305)
Q Consensus 238 g~dv~Iia~G~----~~~~aleAa~~L~~~Gi~---~~vI~~~ 273 (305)
..+|+|++.|+ ....|.+|.+.|++.|++ .+.+|+.
T Consensus 15 ~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~ 57 (121)
T 3gx8_A 15 SAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVL 57 (121)
T ss_dssp SCSEEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECT
T ss_pred cCCEEEEEeccCCCCCCccHHHHHHHHHHcCCCcceEEEEEec
Confidence 46788888873 677899999999999998 8888875
No 115
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=46.04 E-value=61 Score=31.25 Aligned_cols=100 Identities=9% Similarity=-0.073 Sum_probs=52.3
Q ss_pred HHHHHHHHHHhCC-CeEEEEecccchH-HhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCC--C--C--CC---CCC
Q 021963 97 GIVGFAIGLAAMG-NRAIAEIQFADYI-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV--G--H--GG---HYH 165 (305)
Q Consensus 97 ~~v~~AaGlA~~G-~~p~~~~~~~~F~-~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~--~--~--~g---~~h 165 (305)
..+..|.|+|++- -++++++ .++.. +..+..+. .++..+ +|+ .+|+...++.. . . .. ..+
T Consensus 429 ~~l~~A~Gaala~~~~~vv~~-~GDG~~~~~~~eL~-ta~~~~------l~~-~ivv~nN~~~~~~~~~~~~~~~~~~~~ 499 (570)
T 2vbf_A 429 YTFPAALGSQIADKESRHLLF-IGDGSLQLTVQELG-LSIREK------LNP-ICFIINNDGYTVEREIHGPTQSYNDIP 499 (570)
T ss_dssp THHHHHHHHHHHCTTSEEEEE-EEHHHHHHHGGGHH-HHHHTT------CCC-EEEEEESSSCHHHHHHSCTTCGGGCCC
T ss_pred hhHHHHHHHHHhCCCCcEEEE-EcchhhhcCHHHHH-HHHHcC------CCC-EEEEEECCchHHHHHHhccCCCccCCC
Confidence 4567888888763 2566664 56632 22233333 233333 465 55544433321 0 0 10 011
Q ss_pred CchHHHHHccCCCcE-----EEeeCCHHHHHHHHHH-hHhCCCCEEE
Q 021963 166 SQSPEAFFCHVPGLK-----VVIPRSPRQAKGLLLS-CIRDPNPVVF 206 (305)
Q Consensus 166 s~~d~a~~~~iP~l~-----V~~P~d~~e~~~~l~~-a~~~~~Pv~i 206 (305)
..+-..+.+.+ |+. .+...+.+|+...+++ +.+.++|++|
T Consensus 500 ~~d~~~~a~a~-G~~~~~~~~~~v~~~~el~~al~~a~~~~~~p~li 545 (570)
T 2vbf_A 500 MWNYSKLPETF-GATEDRVVSKIVRTENEFVSVMKEAQADVNRMYWI 545 (570)
T ss_dssp CCCGGGHHHHT-TCCTTTEEEEEECBHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCHHHHHHHc-CCCcCCcceEEecCHHHHHHHHHHHHhcCCCcEEE
Confidence 11112233333 443 5566899999999998 4677899988
No 116
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=45.75 E-value=44 Score=27.26 Aligned_cols=85 Identities=7% Similarity=-0.036 Sum_probs=50.5
Q ss_pred HHHHHHHHHHhHhCCCCEEEeccccccccCccCCCCCCCccc----CCceEEeeeCCcEEEEEeChhHHHHHHHHHHHHh
Q 021963 187 PRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLP----LSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 262 (305)
Q Consensus 187 ~~e~~~~l~~a~~~~~Pv~i~~~~~l~~~~~~~~~~~~~~~~----~gk~~~~~~g~dv~Iia~G~~~~~aleAa~~L~~ 262 (305)
-+++..++-.|+..++-+|++-..... .-..++......++ +-....+++++-+.|++....-..+.+.+..+++
T Consensus 24 I~~AA~llaqai~~~g~IyvfG~Ghs~-~~~~e~~~~~e~l~~~~~~~~~~~i~~~D~vii~S~Sg~n~~~ie~A~~ake 102 (170)
T 3jx9_A 24 LFDVVRLLAQALVGQGKVYLDAYGEFE-GLYPMLSDGPDQMKRVTKIKDHKTLHAVDRVLIFTPDTERSDLLASLARYDA 102 (170)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECGGGG-GGTHHHHTSTTCCTTEEECCTTCCCCTTCEEEEEESCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEECCCcHH-HHHHHHHcccCCccchhhhhhcCCCCCCCEEEEEeCCCCCHHHHHHHHHHHH
Confidence 467788888899899999996322110 00000000000010 0001145667777788877777889999999999
Q ss_pred cCCCeEEEEe
Q 021963 263 EGISCELIDL 272 (305)
Q Consensus 263 ~Gi~~~vI~~ 272 (305)
+|+.+-.|--
T Consensus 103 ~G~~vIaITs 112 (170)
T 3jx9_A 103 WHTPYSIITL 112 (170)
T ss_dssp HTCCEEEEES
T ss_pred CCCcEEEEeC
Confidence 9888655543
No 117
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=45.61 E-value=75 Score=31.61 Aligned_cols=87 Identities=9% Similarity=0.055 Sum_probs=48.8
Q ss_pred EEEEecccchH-H--hHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCCCCCC-chHH-HHHccCCCcEEE-ee-
Q 021963 112 AIAEIQFADYI-F--PAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHS-QSPE-AFFCHVPGLKVV-IP- 184 (305)
Q Consensus 112 p~~~~~~~~F~-~--ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g~~hs-~~d~-a~~~~iP~l~V~-~P- 184 (305)
.++++ .++-- + ..++.+. .++..+ ++. .+++....+..-.+.+... .+|+ ..+++. |+.++ .-
T Consensus 150 ~v~~~-~GDG~~~eG~~~Eal~-~A~~~~------L~~-li~i~d~N~~~i~~~~~~~~~~d~~~~~~a~-G~~~~~~vd 219 (673)
T 1r9j_A 150 YTYVY-CGDGCLMEGVCQEALS-LAGHLA------LEK-LIVIYDSNYISIDGSTSLSFTEQCHQKYVAM-GFHVIEVKN 219 (673)
T ss_dssp CEEEE-ECHHHHHSHHHHHHHH-HHHHHT------CTT-EEEEEEECSBCSSSBGGGTCCCCHHHHHHHT-TCEEEEESC
T ss_pred EEEEE-ECcchhcccHHHHHHH-HHHHhC------CCc-EEEEEECCCCccccchhhccCHhHHHHHHHC-CCeEEEEeC
Confidence 34443 56642 3 4466655 344444 343 3444444443221111111 3444 456665 88888 33
Q ss_pred --CCHHHHHHHHHHhHh-CCCCEEEec
Q 021963 185 --RSPRQAKGLLLSCIR-DPNPVVFFE 208 (305)
Q Consensus 185 --~d~~e~~~~l~~a~~-~~~Pv~i~~ 208 (305)
.|.+++..+++.|.+ .++|++|..
T Consensus 220 G~~d~~~l~~Al~~A~~~~~~P~lI~~ 246 (673)
T 1r9j_A 220 GDTDYEGLRKALAEAKATKGKPKMIVQ 246 (673)
T ss_dssp TTTCHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCCEEEEE
Confidence 688999999999987 689998853
No 118
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=45.56 E-value=42 Score=27.61 Aligned_cols=48 Identities=8% Similarity=0.169 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhc-----cCcEEEEeCC
Q 021963 250 LSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRK-----TGRLLPRSSG 299 (305)
Q Consensus 250 ~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~-----~~~vvvvEe~ 299 (305)
-....++++.+++.|+.+.+|.+-+-.. +.+ ++.++++ ..+++++-++
T Consensus 121 ~~~~~~~a~~lk~~gi~v~~Ig~G~~~~-~~~-l~~la~~~n~~~~s~~~~~~~~ 173 (192)
T 2x5n_A 121 EKNLIRLAKRMKKNNVAIDIIHIGELQN-ESA-LQHFIDAANSSDSCHLVSIPPS 173 (192)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEEESCC----CH-HHHHHHHHCSTTCCEEEEECCC
T ss_pred chhHHHHHHHHHHCCCEEEEEEeCCCCc-cHH-HHHHHHhccCCCceEEEEecCc
Confidence 3566778888999999999999988654 324 5555554 2467766655
No 119
>2e85_A Hydrogenase 3 maturation protease; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2i8l_A
Probab=44.58 E-value=59 Score=25.94 Aligned_cols=56 Identities=14% Similarity=0.093 Sum_probs=38.7
Q ss_pred cEEEEEeChhH----HHHHHHHHHHHhcC-CCeEEEEeccccCCCHHHHHHHHh--ccCcEEEEeCC
Q 021963 240 DITLVGWGAQL----SIMEQACLDAEKEG-ISCELIDLKTLIPWDKETVEASVR--KTGRLLPRSSG 299 (305)
Q Consensus 240 dv~Iia~G~~~----~~aleAa~~L~~~G-i~~~vI~~~~i~P~d~~~i~~~~~--~~~~vvvvEe~ 299 (305)
+++|+++|+.. .....++++|++.. -+++++|..+.-+ +.+ ..+. +.+++|+|+--
T Consensus 5 ~~lVlGiGN~l~gDDG~G~~v~~~L~~~~~~~v~vid~gt~~~---~l~-~~l~~~~~d~lIiVDA~ 67 (159)
T 2e85_A 5 TDVLLCVGNSMMGDDGAGPLLAEKCAAAPKGNWVVIDGGSAPE---NDI-VAIRELRPTRLLIVDAT 67 (159)
T ss_dssp CEEEEEECCGGGGGGGHHHHHHHHHHHSCCTTCEEEECTTCSG---GGH-HHHHHHCCSEEEEEEEC
T ss_pred CEEEEEECCcccccccHHHHHHHHHhhhCCCCeEEEECCCCHH---HHH-HHHhcCCCCEEEEEEeC
Confidence 47899999875 35667888887653 2589999998633 233 3333 46899998853
No 120
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=44.50 E-value=26 Score=26.81 Aligned_cols=31 Identities=23% Similarity=0.228 Sum_probs=24.7
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEe
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~ 272 (305)
..++|+++|.+... .++.|.+.|+++.+||.
T Consensus 8 ~~viIiG~G~~G~~---la~~L~~~g~~v~vid~ 38 (140)
T 3fwz_A 8 NHALLVGYGRVGSL---LGEKLLASDIPLVVIET 38 (140)
T ss_dssp SCEEEECCSHHHHH---HHHHHHHTTCCEEEEES
T ss_pred CCEEEECcCHHHHH---HHHHHHHCCCCEEEEEC
Confidence 47999999987654 45677788999999986
No 121
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=44.41 E-value=14 Score=25.83 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=28.5
Q ss_pred cEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccC
Q 021963 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIP 277 (305)
Q Consensus 240 dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P 277 (305)
+++|.+. .....|.++...|++.|++.+.+|+....+
T Consensus 13 ~v~ly~~-~~Cp~C~~~~~~L~~~gi~~~~~~v~~~~~ 49 (92)
T 3ic4_A 13 EVLMYGL-STCPHCKRTLEFLKREGVDFEVIWIDKLEG 49 (92)
T ss_dssp SSEEEEC-TTCHHHHHHHHHHHHHTCCCEEEEGGGCCH
T ss_pred eEEEEEC-CCChHHHHHHHHHHHcCCCcEEEEeeeCCc
Confidence 4666543 456788888889999999999999886544
No 122
>1cfz_A Hydrogenase 2 maturation protease; metzincins, nickel; 2.20A {Escherichia coli} SCOP: c.56.1.1 PDB: 2kml_A
Probab=44.40 E-value=45 Score=26.72 Aligned_cols=56 Identities=20% Similarity=0.134 Sum_probs=40.5
Q ss_pred cEEEEEeChhH----HHHHHHHHHHHhc-C--CCeEEEEeccccCCCHHHHHHHHhccCcEEEEeCC
Q 021963 240 DITLVGWGAQL----SIMEQACLDAEKE-G--ISCELIDLKTLIPWDKETVEASVRKTGRLLPRSSG 299 (305)
Q Consensus 240 dv~Iia~G~~~----~~aleAa~~L~~~-G--i~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvEe~ 299 (305)
+++|+++|+.. .....++++|++. . -+++++|..+.- + +.+ ..+...+++|+|+--
T Consensus 2 ~ilVlGiGN~l~gDDG~G~~v~~~L~~~~~~p~~v~vid~gt~~-~--~l~-~~l~~~d~lIiVDA~ 64 (162)
T 1cfz_A 2 RILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTAG-M--ELL-GDMANRDHLIIADAI 64 (162)
T ss_dssp CEEEEEESCTTBGGGGHHHHHHHHHHHHEECCTTEEEEEEETCC-G--GGH-HHHSSCSEEEEEEEC
T ss_pred CEEEEEECCcccccccHHHHHHHHHHhhCCCCCCeEEEECCCCH-H--HHH-HHHhCCCEEEEEEeh
Confidence 47899999874 3566788888764 3 369999999952 3 333 556778999999853
No 123
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=43.96 E-value=44 Score=30.37 Aligned_cols=59 Identities=19% Similarity=0.225 Sum_probs=40.5
Q ss_pred eeCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEecccc-------------CCCHHHHHHHHhccCcEEEEeC
Q 021963 236 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLI-------------PWDKETVEASVRKTGRLLPRSS 298 (305)
Q Consensus 236 ~~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~-------------P~d~~~i~~~~~~~~~vvvvEe 298 (305)
..++.+.|++.|.......+++ ++.|+++-++|..--. ..|.+.+.+.+++.+ +|+.|-
T Consensus 10 ~~~~~IlIlG~G~lg~~la~aa---~~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~d-vi~~~~ 81 (377)
T 3orq_A 10 KFGATIGIIGGGQLGKMMAQSA---QKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCD-VITYEF 81 (377)
T ss_dssp CTTCEEEEECCSHHHHHHHHHH---HHTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCS-EEEESS
T ss_pred CCCCEEEEECCCHHHHHHHHHH---HHCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCC-cceecc
Confidence 3567899999998765554444 4559999999864222 246678888887754 667763
No 124
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=43.37 E-value=60 Score=26.06 Aligned_cols=55 Identities=15% Similarity=0.213 Sum_probs=35.6
Q ss_pred eChhHHHHHHHHHHHHhcCCCeEEEEeccccCC----------C----HHHHHHHHhccCcEEEEeCCcc
Q 021963 246 WGAQLSIMEQACLDAEKEGISCELIDLKTLIPW----------D----KETVEASVRKTGRLLPRSSGYW 301 (305)
Q Consensus 246 ~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~----------d----~~~i~~~~~~~~~vvvvEe~~~ 301 (305)
+|.+-..+..+++.|++.|++++++|+....|. | .+. .+.+...+.||+.=.-|.
T Consensus 14 ~g~T~~la~~i~~~l~~~g~~v~~~~l~~~~~~~~~~~~~~~~~d~~~~~~-~~~l~~aD~ii~gsP~y~ 82 (199)
T 2zki_A 14 YGSIVELAKEIGKGAEEAGAEVKIRRVRETLPPEFQSRIPFDKVKDIPEVT-LDDMRWADGFAIGSPTRY 82 (199)
T ss_dssp SSHHHHHHHHHHHHHHHHSCEEEEEECCCCSCGGGGTTCCGGGSTTSCBCC-HHHHHHCSEEEEEEECBT
T ss_pred ccHHHHHHHHHHHHHHhCCCEEEEEehhHhCChhhhhccCCCccccccccc-HHHHHhCCEEEEECCccc
Confidence 455666666777788888999999999875111 1 111 344667777877655544
No 125
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=42.98 E-value=51 Score=26.40 Aligned_cols=30 Identities=13% Similarity=0.206 Sum_probs=23.7
Q ss_pred eChhHHHHHHHHHHHHh-cCCCeEEEEeccc
Q 021963 246 WGAQLSIMEQACLDAEK-EGISCELIDLKTL 275 (305)
Q Consensus 246 ~G~~~~~aleAa~~L~~-~Gi~~~vI~~~~i 275 (305)
+|.+-..|..+++.|++ .|++++++|+...
T Consensus 12 ~g~t~~la~~i~~~l~~~~g~~v~~~~l~~~ 42 (198)
T 3b6i_A 12 YGHIETMARAVAEGASKVDGAEVVVKRVPET 42 (198)
T ss_dssp SSHHHHHHHHHHHHHHTSTTCEEEEEECCCC
T ss_pred CcHHHHHHHHHHHHHhhcCCCEEEEEEcccc
Confidence 35566677777788887 8999999999875
No 126
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=42.35 E-value=61 Score=32.11 Aligned_cols=99 Identities=13% Similarity=0.102 Sum_probs=56.1
Q ss_pred HHHHHHHHHhCC------------CeEEEEecccchH-H--hHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCC
Q 021963 98 IVGFAIGLAAMG------------NRAIAEIQFADYI-F--PAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGG 162 (305)
Q Consensus 98 ~v~~AaGlA~~G------------~~p~~~~~~~~F~-~--ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g 162 (305)
.++.|.|+|++- -+.++++ .++-- + .+++.+. .++..+ ++. .+++....+..- ++
T Consensus 119 gl~~AvG~AlA~~~~~~~~n~~~~d~~v~~v-~GDG~~~eG~~~Eal~-~A~~~~------L~~-livi~nnN~~~i-~~ 188 (632)
T 3l84_A 119 GVANAVGFAMAAKKAQNLLGSDLIDHKIYCL-CGDGDLQEGISYEACS-LAGLHK------LDN-FILIYDSNNISI-EG 188 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTTCCCCEEEE-EEHHHHHSHHHHHHHH-HHHHTT------CTT-EEEEEEECSEET-TE
T ss_pred HHHHHHHHHHHHHhhccccccCCCCCeEEEE-ECCcchhhccHHHHHH-HHHHcC------CCc-EEEEEECCCccc-cc
Confidence 456666666642 2344444 56543 3 5666655 344444 343 344444433321 11
Q ss_pred CCC--CchHH-HHHccCCCcEEEeeC---CHHHHHHHHHHhHhCCCCEEEec
Q 021963 163 HYH--SQSPE-AFFCHVPGLKVVIPR---SPRQAKGLLLSCIRDPNPVVFFE 208 (305)
Q Consensus 163 ~~h--s~~d~-a~~~~iP~l~V~~P~---d~~e~~~~l~~a~~~~~Pv~i~~ 208 (305)
.++ ..+|+ ..++++ |+.++ +. |.+++..+++.+.+.++|++|..
T Consensus 189 ~~~~~~~~d~~~~~~a~-G~~~~-~vdGhd~~~l~~al~~A~~~~~P~lI~v 238 (632)
T 3l84_A 189 DVGLAFNENVKMRFEAQ-GFEVL-SINGHDYEEINKALEQAKKSTKPCLIIA 238 (632)
T ss_dssp EGGGTCCCCHHHHHHHT-TCEEE-EEETTCHHHHHHHHHHHHTCSSCEEEEE
T ss_pred chhhhcChhHHHHHHHc-CCeEE-EEeeCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 111 12343 456666 78877 55 78999999999988899999854
No 127
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=41.73 E-value=1.2e+02 Score=29.75 Aligned_cols=25 Identities=8% Similarity=-0.156 Sum_probs=21.7
Q ss_pred eeCCHHHHHHHHHHhHhCCCCEEEe
Q 021963 183 IPRSPRQAKGLLLSCIRDPNPVVFF 207 (305)
Q Consensus 183 ~P~d~~e~~~~l~~a~~~~~Pv~i~ 207 (305)
...|.+++...++++.+.++|++|.
T Consensus 255 dG~d~~~l~~al~~A~~~~gP~lI~ 279 (621)
T 2o1s_A 255 DGHDVLGLITTLKNMRDLKGPQFLH 279 (621)
T ss_dssp ETTCHHHHHHHHHHHHHSCSEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 4468999999999999989999984
No 128
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=41.40 E-value=58 Score=26.77 Aligned_cols=53 Identities=8% Similarity=0.149 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHHHhcCCCeEEEEeccccCCCH----------HHHHHHHhccCcEEEEeCCcc
Q 021963 249 QLSIMEQACLDAEKEGISCELIDLKTLIPWDK----------ETVEASVRKTGRLLPRSSGYW 301 (305)
Q Consensus 249 ~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~----------~~i~~~~~~~~~vvvvEe~~~ 301 (305)
......+++..+.++|.+++++|+.-+-.+|. +.+.+.++..+.+|++-.-|-
T Consensus 17 ~~~~la~~~~~~~~~~~~~~~idl~dLP~~~~d~~~~~p~~~~~l~~~i~~aD~~ii~tPeYn 79 (190)
T 3u7r_A 17 LNHKLMKVLQKLAEGRLEFHLLHIGDLPHYNDDLWADAPESVLRLKDRIEHSDAVLAITPEYN 79 (190)
T ss_dssp HHHHHHHHHHHHHTTTEEEEECCGGGSCCCCGGGGGGCCHHHHHHHHHHHTSSEEEEECCCBT
T ss_pred HHHHHHHHHHHhccCCCEEEEEecccCCCCCCCcccCCCHHHHHHHHHHHhCCcEEEechhhc
Confidence 34445555555666799999999887533332 346677888888888765544
No 129
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=41.28 E-value=54 Score=29.54 Aligned_cols=58 Identities=12% Similarity=0.115 Sum_probs=38.5
Q ss_pred EEEEEeChhH----HHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccCcEEEEeCCcc
Q 021963 241 ITLVGWGAQL----SIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLPRSSGYW 301 (305)
Q Consensus 241 v~Iia~G~~~----~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvEe~~~ 301 (305)
-++|.++++. ..|..+++.|++.|++++++++. ..+.+.+.+.+..++.+++.-..|.
T Consensus 253 ~i~i~y~S~~GnT~~lA~~ia~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~d~ii~g~p~y~ 314 (398)
T 1ycg_A 253 KAVIAYDTMWLSTEKMAHALMDGLVAGGCEVKLFKLS---VSDRNDVIKEILDARAVLVGSPTIN 314 (398)
T ss_dssp EEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGG---GSCHHHHHHHHHHCSEEEEECCCBT
T ss_pred eEEEEEECCccHHHHHHHHHHHHHHhcCCeEEEEECC---CCCHHHHHHHHHHCCEEEEECCccC
Confidence 3455566544 45555566777779999999875 3456666666778888887765543
No 130
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=41.20 E-value=37 Score=26.80 Aligned_cols=50 Identities=12% Similarity=-0.019 Sum_probs=35.7
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccC-CCHHHHHHH
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIP-WDKETVEAS 286 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P-~d~~~i~~~ 286 (305)
++.++++||-|+.....+..++.|.+.|.++.++..++-.- +-.+.+.+.
T Consensus 22 ~~~~~llIaGG~GItPl~sm~~~l~~~~~~v~l~g~r~~~d~~~~~el~~l 72 (158)
T 3lrx_A 22 KFGKILAIGAYTGIVEVYPIAKAWQEIGNDVTTLHVTFEPMVILKEELEKA 72 (158)
T ss_dssp CCSEEEEEEETTHHHHHHHHHHHHHHHTCEEEEEEECBGGGCCSHHHHHHH
T ss_pred CCCeEEEEEccCcHHHHHHHHHHHHhcCCcEEEEEeCCHHHhhHHHHHHHH
Confidence 35689999999998888888888877787888885555432 223455443
No 131
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=40.69 E-value=80 Score=24.57 Aligned_cols=58 Identities=16% Similarity=0.133 Sum_probs=40.3
Q ss_pred cEEEEEeCh-hHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHH-HHhccCcEEEEeC
Q 021963 240 DITLVGWGA-QLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEA-SVRKTGRLLPRSS 298 (305)
Q Consensus 240 dv~Iia~G~-~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~-~~~~~~~vvvvEe 298 (305)
++.|+..+. ....|.+..+.|++.|+.+++.+.++=-+|.. .|++ ...+..-+++|-+
T Consensus 10 Qv~IlpVs~~~~~YA~~V~~~L~~~GiRvevD~~r~~e~Lg~-kIR~a~~~kvPy~lVVG~ 69 (130)
T 1v95_A 10 DCSVIVVNKQTKDYAESVGRKVRDLGMVVDLIFLNTEVSLSQ-ALEDVSRGGSPFAIVITQ 69 (130)
T ss_dssp TEEEEESSSGGGHHHHHHHHHHHTTTCCEEEEECTTSSCHHH-HHHHHHHHTCSEEEEECH
T ss_pred eEEEEEeCcchHHHHHHHHHHHHHCCCEEEEecCCCCCcHHH-HHHHHHHcCCCEEEEEec
Confidence 566666554 57899999999999999999866543345544 3544 3556777777643
No 132
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=40.66 E-value=48 Score=29.98 Aligned_cols=54 Identities=13% Similarity=0.183 Sum_probs=36.7
Q ss_pred EEEEeCh----hHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccCcEEEEeC
Q 021963 242 TLVGWGA----QLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLPRSS 298 (305)
Q Consensus 242 ~Iia~G~----~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvEe 298 (305)
+++.+++ +-..|..+++.|++.|++++++++.. .+.+.+.+.+..++.|++.=.
T Consensus 259 ~~i~~~S~~gnT~~la~~i~~~l~~~g~~v~~~~~~~---~~~~~~~~~l~~~d~iiigsP 316 (404)
T 2ohh_A 259 VTVIYDTMHGSTRKMAHAIAEGAMSEGVDVRVYCLHE---DDRSEIVKDILESGAIALGAP 316 (404)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHTTTCEEEEEETTT---SCHHHHHHHHHTCSEEEEECC
T ss_pred EEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECCC---CCHHHHHHHHHHCCEEEEECc
Confidence 4444555 44556666677777799999998654 466666677788888877644
No 133
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=40.59 E-value=20 Score=26.05 Aligned_cols=36 Identities=11% Similarity=0.244 Sum_probs=29.2
Q ss_pred CCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEecc
Q 021963 238 GSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKT 274 (305)
Q Consensus 238 g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~ 274 (305)
..+++|.+. ..-..|.+|.+.|++.|++.+.+|+..
T Consensus 15 ~~~v~vy~~-~~Cp~C~~ak~~L~~~~i~y~~idI~~ 50 (99)
T 3qmx_A 15 SAKIEIYTW-STCPFCMRALALLKRKGVEFQEYCIDG 50 (99)
T ss_dssp CCCEEEEEC-TTCHHHHHHHHHHHHHTCCCEEEECTT
T ss_pred CCCEEEEEc-CCChhHHHHHHHHHHCCCCCEEEEcCC
Confidence 346777665 456889999999999999999999876
No 134
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Probab=40.46 E-value=98 Score=28.28 Aligned_cols=33 Identities=15% Similarity=0.262 Sum_probs=25.2
Q ss_pred ccCCCcEEEeeCCHHHHHHHHHHhHh----CCCCEEEe
Q 021963 174 CHVPGLKVVIPRSPRQAKGLLLSCIR----DPNPVVFF 207 (305)
Q Consensus 174 ~~iP~l~V~~P~d~~e~~~~l~~a~~----~~~Pv~i~ 207 (305)
-.+|.+.| .-.|+.++..+++.|++ .++|++|-
T Consensus 226 ~G~~~~~V-dG~D~~av~~a~~~A~~~~r~~~gP~lIe 262 (368)
T 1w85_A 226 AGIPGIQV-DGMDPLAVYAAVKAARERAINGEGPTLIE 262 (368)
T ss_dssp TTCCEEEE-ETTCHHHHHHHHHHHHHHHHTTSCCEEEE
T ss_pred CCCCEEEE-cCCCHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 35666644 44589999999999997 57999983
No 135
>3pl5_A SMU_165, putative uncharacterized protein; fatty acid binding protein, lipid binding protein; HET: PLM; 2.04A {Streptococcus mutans}
Probab=40.38 E-value=95 Score=27.86 Aligned_cols=68 Identities=9% Similarity=0.101 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEecccCCCcccccc----hhhHhhhCCC---cEEec---chhHHHHHHHHHHHHhCCC
Q 021963 42 LYSAINQALHIALETDPRAYVFGEDVGFGGVFRCT----TGLADRFGKS---RVFNT---PLCEQGIVGFAIGLAAMGN 110 (305)
Q Consensus 42 ~r~a~~~~L~~l~~~~~~iv~~~~D~~~g~~~~~~----~~~~~~~gp~---r~~~~---gIaE~~~v~~AaGlA~~G~ 110 (305)
.-..|.+.+.++.++..+|++++=--+.+|+|... +.+.++| |+ +++|+ +..+..++--|+=++..|.
T Consensus 100 s~~~~~~~f~~l~~~g~~Ii~I~iSS~LSGTy~sA~~Aa~~~~e~~-~~~~I~ViDS~~~s~g~g~lv~~Aa~l~~~G~ 177 (320)
T 3pl5_A 100 NVGQFESYFRQSAENGQEVLYIAFSSVLSGTYQSAVMARDIVLEEY-PQASIEIVDTLAATGGEGYLAMLAAQAREEGK 177 (320)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCTTTCTHHHHHHHHHHHHHHHC-TTCCEEEEECCCCHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHCCCeEEEEecCchHhHHHHHHHHHHHHHHhhC-CCCeEEEEcCCchHHHHHHHHHHHHHHHhcCC
Confidence 35668888888998888998887555544555432 3344578 76 57775 5666677777777777775
No 136
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=40.37 E-value=39 Score=28.59 Aligned_cols=27 Identities=19% Similarity=0.257 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHHHhcCCCeEEEEeccc
Q 021963 249 QLSIMEQACLDAEKEGISCELIDLKTL 275 (305)
Q Consensus 249 ~~~~aleAa~~L~~~Gi~~~vI~~~~i 275 (305)
....+..+++.|++.|.+++++|+...
T Consensus 17 t~~l~~~~~~~l~~~g~ev~~~dL~~~ 43 (228)
T 3tem_A 17 NGSLKNVAVDELSRQGCTVTVSDLYAM 43 (228)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEETTTT
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEhhhc
Confidence 345566677788888999999999764
No 137
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=39.95 E-value=41 Score=29.71 Aligned_cols=53 Identities=11% Similarity=0.081 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEeccccC--------------------------------C--CHHHHHHHHhccCcEEE
Q 021963 250 LSIMEQACLDAEKEGISCELIDLKTLIP--------------------------------W--DKETVEASVRKTGRLLP 295 (305)
Q Consensus 250 ~~~aleAa~~L~~~Gi~~~vI~~~~i~P--------------------------------~--d~~~i~~~~~~~~~vvv 295 (305)
...+..+++.|++.|.+|+++|+.-.++ + |.+...+.+...+.||+
T Consensus 39 ~aL~~~~~~~l~~~G~eV~v~DLy~~~f~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~aD~iv~ 118 (280)
T 4gi5_A 39 GALKNFAIRHLQQAGHEVQVSDLYAMRWKAGYDADDSGAPPVGEFWRPTLDSKQAFAQGTQSADIVAEQEKLLWADTVIF 118 (280)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEETTTTTCCCSCCGGGSSSSCSSSSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHHHHHCCCeEEEEEccccCCCCcCCHHHhcccccccccChhhHHHHHhhcCCCcHHHHHHHHHHHhCCEEEE
Confidence 3455567788999999999999975443 1 22334556777888888
Q ss_pred EeCCccc
Q 021963 296 RSSGYWR 302 (305)
Q Consensus 296 vEe~~~~ 302 (305)
+=.-|+.
T Consensus 119 ~~P~~w~ 125 (280)
T 4gi5_A 119 QFPLWWF 125 (280)
T ss_dssp EEECBTT
T ss_pred Eeccccc
Confidence 7766553
No 138
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=39.09 E-value=93 Score=30.94 Aligned_cols=107 Identities=13% Similarity=0.034 Sum_probs=58.2
Q ss_pred ecchhHHHHHHHHHHHHhCC---------------CeEEEEecccchH-H--hHHHHHHHHHhhcccccCCCcccceeEE
Q 021963 90 NTPLCEQGIVGFAIGLAAMG---------------NRAIAEIQFADYI-F--PAFDQIVNEAAKFRYRSGNQFNCGGLTV 151 (305)
Q Consensus 90 ~~gIaE~~~v~~AaGlA~~G---------------~~p~~~~~~~~F~-~--ra~dqi~~~~a~~~~~~~~~~~v~~lv~ 151 (305)
.+|.-=+ .+++|.|+|++- -+.++++ .++-- + .+++.+. .++..+ ++. .+++
T Consensus 114 ~tG~lG~-gl~~AvG~AlA~~~~~~~~~~~~~~~~d~~v~~i-~GDG~l~eG~~~Eal~-~A~~~~------L~~-livi 183 (663)
T 3kom_A 114 TTGPLGQ-GVANAVGMALGEKLLSDRYNTPDLKVIDHHTYVF-LGDGCLMEGVSHEACS-LAGTLG------LNK-LVAF 183 (663)
T ss_dssp CCCSTTH-HHHHHHHHHHHHHHHHHHHCBTTBCSCCCCEEEE-ECHHHHHSHHHHHHHH-HHHHHT------CTT-EEEE
T ss_pred CCcchhh-HHHHHHHHHHhHHhhcccccccccccCCCeEEEE-ECchhhhhchHHHHHH-HHHHhC------CCe-EEEE
Confidence 4443333 356667776642 1344554 56642 3 4566554 345444 343 3444
Q ss_pred EcCCcCCCCCCCCC--CchHH-HHHccCCCcEEEeeC---CHHHHHHHHHHhHh-CCCCEEEec
Q 021963 152 RAPYGAVGHGGHYH--SQSPE-AFFCHVPGLKVVIPR---SPRQAKGLLLSCIR-DPNPVVFFE 208 (305)
Q Consensus 152 ~~~~g~~~~~g~~h--s~~d~-a~~~~iP~l~V~~P~---d~~e~~~~l~~a~~-~~~Pv~i~~ 208 (305)
....+..- ++.+. ..+|+ ..+++. |+.++-+. |.+++..+++.+.+ .++|++|..
T Consensus 184 ~dnN~~~i-~~~~~~~~~~d~~~~~~a~-G~~~~~~vdG~d~~~l~~al~~A~~~~~~P~lI~~ 245 (663)
T 3kom_A 184 WDDNNISI-DGDTKGWFSDNTPERFRAY-GWHVIENVDGHDFVAIEKAINEAHSQQQKPTLICC 245 (663)
T ss_dssp EEECC------CGGGTCCCCHHHHHHHT-TCEEEEEEETTCHHHHHHHHHHHHHCSSSCEEEEE
T ss_pred EECCCccc-ccchhhhcchhHHHHHHHC-CCeEEEEEcCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 44443321 12111 12343 456666 78877443 78999999999998 589999954
No 139
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=38.91 E-value=44 Score=25.47 Aligned_cols=36 Identities=8% Similarity=0.076 Sum_probs=29.2
Q ss_pred CCcEEEEEeCh----hHHHHHHHHHHHHhcCC-CeEEEEec
Q 021963 238 GSDITLVGWGA----QLSIMEQACLDAEKEGI-SCELIDLK 273 (305)
Q Consensus 238 g~dv~Iia~G~----~~~~aleAa~~L~~~Gi-~~~vI~~~ 273 (305)
.++|+|++-|+ ....|.+|.+.|++.|+ +...+|+.
T Consensus 19 ~~~VvvF~Kgt~~~P~C~fc~~ak~lL~~~gv~~~~~~~v~ 59 (118)
T 2wul_A 19 KDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVL 59 (118)
T ss_dssp HSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCSCEEEETT
T ss_pred cCCEEEEEcCCCCCCCCHHHHHHHHHHHHhCCcCeEeeccc
Confidence 46788988885 46789999999999998 58888874
No 140
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=38.48 E-value=82 Score=28.81 Aligned_cols=63 Identities=6% Similarity=-0.026 Sum_probs=41.9
Q ss_pred EEEEeCh-hHHHHHHHHHHHHhcCCCeEEEEeccccCCCHH-----HHHHHHhcc-CcEEEEeCCccccC
Q 021963 242 TLVGWGA-QLSIMEQACLDAEKEGISCELIDLKTLIPWDKE-----TVEASVRKT-GRLLPRSSGYWRFW 304 (305)
Q Consensus 242 ~Iia~G~-~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~-----~i~~~~~~~-~~vvvvEe~~~~~~ 304 (305)
+|+++|. +..+.++|++.+.+.|-++.+.++.+-.|-+.+ .|..+-+.+ +..|-.-+|..+.|
T Consensus 138 viLstGmstl~Ei~~Ave~i~~~g~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~lpVG~SdHt~g~~ 207 (350)
T 3g8r_A 138 VVASTAGARREDIDKVVSFMLHRGKDLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVRIGYSTHEDPDL 207 (350)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTTTCCEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTSEEEEEECCCSSC
T ss_pred EEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCcccCCHHHHHHHHHHCCCCCEEcCCCCCCCc
Confidence 5678884 578899999999888877777777776775544 343333345 44455666765544
No 141
>2nys_A AGR_C_3712P; SSPB, stringent starvation protein B, NESG, ATR88, structural genomics, PSI-2, protein structure initiative; 2.70A {Agrobacterium tumefaciens str} SCOP: b.136.1.2
Probab=38.14 E-value=7.3 Score=32.09 Aligned_cols=71 Identities=21% Similarity=0.290 Sum_probs=53.8
Q ss_pred cHHHHHHHHHHHHHhcC----CCEEEEecccCCCcccccchhhHhhhCCC--------cEEecchhHHHHHHHHHHHHhC
Q 021963 41 NLYSAINQALHIALETD----PRAYVFGEDVGFGGVFRCTTGLADRFGKS--------RVFNTPLCEQGIVGFAIGLAAM 108 (305)
Q Consensus 41 ~~r~a~~~~L~~l~~~~----~~iv~~~~D~~~g~~~~~~~~~~~~~gp~--------r~~~~gIaE~~~v~~AaGlA~~ 108 (305)
.+|.++.++|.+.++.. ..-+.|+=+....|+- ..+.++++| |+ +|.|.-+.|.. +..||+..
T Consensus 15 AlrgVvr~vL~~va~~g~LPg~HHFyITF~T~~pGV~-i~~~L~~~Y-P~EMTIVLQhQF~dL~V~e~~---FsV~LsFg 89 (176)
T 2nys_A 15 ALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVR-ISQHLKSKY-AEQMTIVIQHQFWDMKVTETG---FEIGLSFS 89 (176)
T ss_dssp HHHHHHHHHHHHHHHHSSCCTTCCEEEEEESSSTTCB-CCHHHHHHS-SSEEEEEESSSCEEEEECSSE---EEEEEEET
T ss_pred HHHHHHHHHHHHHHHcCCCCCccEEEEEEecCCCCcc-CCHHHHhhC-CCceEEEEEeeecCcEEecCc---EEEEEEeC
Confidence 48899999999999977 4457777776543432 468999999 76 68999999986 77888888
Q ss_pred CCeEEEEe
Q 021963 109 GNRAIAEI 116 (305)
Q Consensus 109 G~~p~~~~ 116 (305)
|..--+.+
T Consensus 90 g~pe~L~I 97 (176)
T 2nys_A 90 DTPEKLVI 97 (176)
T ss_dssp TEEEEEEE
T ss_pred CeeeEEEe
Confidence 87544444
No 142
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=38.11 E-value=38 Score=26.84 Aligned_cols=30 Identities=13% Similarity=0.125 Sum_probs=20.0
Q ss_pred ChhHHHHHHHHHHHHhcCCCeEEEEecccc
Q 021963 247 GAQLSIMEQACLDAEKEGISCELIDLKTLI 276 (305)
Q Consensus 247 G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~ 276 (305)
|.+-..|...++.|++.|+++.++++....
T Consensus 21 GnT~~~A~~ia~~l~~~g~~v~~~~~~~~~ 50 (167)
T 1ykg_A 21 GNARRVAEALRDDLLAAKLNVKLVNAGDYK 50 (167)
T ss_dssp SHHHHHHHHHHHHHHHHTCCCEEEEGGGCC
T ss_pred hHHHHHHHHHHHHHHHCCCceEEeehhhCC
Confidence 444455555566677779999999886543
No 143
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=38.09 E-value=1.4e+02 Score=29.26 Aligned_cols=97 Identities=11% Similarity=0.060 Sum_probs=52.0
Q ss_pred HHHHHHHHHhCC------CeEEEEecccchH-H--hHHHHHHHHHhhcccccCCCcccceeEEEcCCcCCCCCC--CCCC
Q 021963 98 IVGFAIGLAAMG------NRAIAEIQFADYI-F--PAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGG--HYHS 166 (305)
Q Consensus 98 ~v~~AaGlA~~G------~~p~~~~~~~~F~-~--ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~~~~g--~~hs 166 (305)
.++.|.|+|++. -+.++++ .++-. + .+++.+. .++..+ ++. .+++....+....+. ....
T Consensus 126 gl~~A~G~AlA~~~~~~~~~~vv~v-~GDG~~~eG~~~Eal~-~A~~~~------l~~-livi~nnN~~~i~~~~~~~~~ 196 (616)
T 3mos_A 126 GLGAACGMAYTGKYFDKASYRVYCL-LGDGELSEGSVWEAMA-FASIYK------LDN-LVAILDINRLGQSDPAPLQHQ 196 (616)
T ss_dssp HHHHHHHHHHHHHHTSCCSCCEEEE-EETGGGGSHHHHHHHH-HHHHTT------CTT-EEEEEEECSBCSSSBCTTTTC
T ss_pred ccHHHHHHHHHHHHhCCCCCEEEEE-ECccccccCcHHHHHH-HHHHcC------CCc-EEEEEECCCCCCcCCcccccC
Confidence 466777777652 1344454 55532 2 5666655 344444 343 444444443322221 1223
Q ss_pred chHH-HHHccCCCcEEEeeC---CHHHHHHHHHHhHhCCCCEEEe
Q 021963 167 QSPE-AFFCHVPGLKVVIPR---SPRQAKGLLLSCIRDPNPVVFF 207 (305)
Q Consensus 167 ~~d~-a~~~~iP~l~V~~P~---d~~e~~~~l~~a~~~~~Pv~i~ 207 (305)
..|+ ..++.+ |+.++ +. |.+++...++.+ .++|++|.
T Consensus 197 ~~~~~~~~~a~-G~~~~-~VdG~d~~~l~~al~~~--~~~P~lI~ 237 (616)
T 3mos_A 197 MDIYQKRCEAF-GWHAI-IVDGHSVEELCKAFGQA--KHQPTAII 237 (616)
T ss_dssp HHHHHHHHHHT-TCEEE-EEETTCHHHHHHHHHSC--CSSCEEEE
T ss_pred hHHHHHHHHHc-CCeEE-EEcCCCHHHHHHHHHhc--CCCCEEEE
Confidence 3454 456666 77766 44 677777777655 57999984
No 144
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=38.03 E-value=26 Score=34.14 Aligned_cols=112 Identities=13% Similarity=0.031 Sum_probs=60.7
Q ss_pred CCcEEec-chhH-HHHHHHHHHHHhCC-CeEEEEecccchH-HhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCC--
Q 021963 85 KSRVFNT-PLCE-QGIVGFAIGLAAMG-NRAIAEIQFADYI-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV-- 158 (305)
Q Consensus 85 p~r~~~~-gIaE-~~~v~~AaGlA~~G-~~p~~~~~~~~F~-~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~-- 158 (305)
|.+|+.. |..= -..++.|.|+|++. -++++++ .++.. +..++.+. .++..+ +|+ .+|+...++..
T Consensus 414 ~~~~~~~~g~g~mG~~l~~AiGaala~~~~~vv~i-~GDG~~~~~~~~L~-ta~~~~------l~~-~ivv~nN~~~~~~ 484 (589)
T 2pgn_A 414 PRRLVTSMAEGILGCGFPMALGAQLAEPNSRVFLG-TGDGALYYHFNEFR-VAVEHK------LPV-ITMVFTNESYGAN 484 (589)
T ss_dssp TTCEESCTTTCCTTCHHHHHHHHHHHCTTSCEEEE-EEHHHHHHHGGGHH-HHHHTT------CCC-EEEEEECSBCHHH
T ss_pred CCcEECCCCcchhhhHHHHHHHHHHhCCCCcEEEE-EeeHHHHhhHHHHH-HHHHhC------CCe-EEEEEECCCcccc
Confidence 6677763 2111 13568888888763 3555554 55532 22233333 233333 465 55544433221
Q ss_pred CC------CCC--CC-CchHH-HHHccCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 021963 159 GH------GGH--YH-SQSPE-AFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (305)
Q Consensus 159 ~~------~g~--~h-s~~d~-a~~~~iP~l~V~~P~d~~e~~~~l~~a~~~~~Pv~i 206 (305)
.. ++. +. ...|. .+.+.+ |+..+...+.+|+...++++++.++|++|
T Consensus 485 ~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~li 541 (589)
T 2pgn_A 485 WTLMNHQFGQNNWTEFMNPDWVGIAKAF-GAYGESVRETGDIAGALQRAIDSGKPALI 541 (589)
T ss_dssp HHHHHHHHSSCCSCBCCCCCHHHHHHHH-TCEEEECTTTCCHHHHHHHHHHHCSCEEE
T ss_pred hHHHHhhcCCCccccCCCCCHHHHHHHC-CCeEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence 00 010 11 11232 333333 66677778999999999999988999998
No 145
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.00 E-value=36 Score=25.14 Aligned_cols=34 Identities=15% Similarity=0.074 Sum_probs=25.2
Q ss_pred cEEEEEeChhHHHHH------HHHHHHHhcCCCeEEEEecc
Q 021963 240 DITLVGWGAQLSIME------QACLDAEKEGISCELIDLKT 274 (305)
Q Consensus 240 dv~Iia~G~~~~~al------eAa~~L~~~Gi~~~vI~~~~ 274 (305)
+|+|.+. +....|. +|.+.|++.|++.+.+|+..
T Consensus 9 ~V~vy~~-~~C~~C~~~~~~~~ak~~L~~~gi~y~~vdI~~ 48 (111)
T 2ct6_A 9 VIRVFIA-SSSGFVAIKKKQQDVVRFLEANKIEFEEVDITM 48 (111)
T ss_dssp CEEEEEC-SSCSCHHHHHHHHHHHHHHHHTTCCEEEEETTT
T ss_pred EEEEEEc-CCCCCcccchhHHHHHHHHHHcCCCEEEEECCC
Confidence 4666654 3334555 78889999999999999976
No 146
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=37.75 E-value=57 Score=30.22 Aligned_cols=58 Identities=14% Similarity=0.102 Sum_probs=39.0
Q ss_pred eeCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEec-------------cccCCCHHHHHHHHhccCcEEEEe
Q 021963 236 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK-------------TLIPWDKETVEASVRKTGRLLPRS 297 (305)
Q Consensus 236 ~~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~-------------~i~P~d~~~i~~~~~~~~~vvvvE 297 (305)
.+|+.+.|++.|.......+++ ++.|+++-++|.. .....|.+.|.+.+++.+ +|+.|
T Consensus 33 ~~~~~IlIlG~G~lg~~~~~aa---~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D-~V~~~ 103 (419)
T 4e4t_A 33 LPGAWLGMVGGGQLGRMFCFAA---QSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCE-AVSTE 103 (419)
T ss_dssp CTTCEEEEECCSHHHHHHHHHH---HHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCS-EEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHH---HHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCC-EEEEc
Confidence 4567899999997655554444 4559999999853 122346778888886554 55565
No 147
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=37.24 E-value=13 Score=29.37 Aligned_cols=37 Identities=19% Similarity=0.156 Sum_probs=27.5
Q ss_pred CCcEEEEEeChhHHH-HHHHHHHHHhcCCCeEEEEecc
Q 021963 238 GSDITLVGWGAQLSI-MEQACLDAEKEGISCELIDLKT 274 (305)
Q Consensus 238 g~dv~Iia~G~~~~~-aleAa~~L~~~Gi~~~vI~~~~ 274 (305)
..|++||++|..... --+..+.|++.||.+++.|-..
T Consensus 67 ~pevliiGTG~~~~~l~p~l~~~l~~~GI~vE~M~T~a 104 (135)
T 2fvt_A 67 AIDTLIVGTGADVWIAPRQLREALRGVNVVLDTMQTGP 104 (135)
T ss_dssp SCSEEEEECTTSCCCCCHHHHHHHHTTTCEEEEECHHH
T ss_pred CCCEEEEcCCCCCCcCCHHHHHHHHHcCCEEEEeCHHH
Confidence 479999999975432 2345578889999999987653
No 148
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=37.04 E-value=70 Score=30.82 Aligned_cols=144 Identities=12% Similarity=0.051 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHhc--CCCEEEEecccCCCcccccchhhHhhhCCCcEEecc---hhHHHHHHHHHHHHhC-CCeEEEEec
Q 021963 44 SAINQALHIALET--DPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTP---LCEQGIVGFAIGLAAM-GNRAIAEIQ 117 (305)
Q Consensus 44 ~a~~~~L~~l~~~--~~~iv~~~~D~~~g~~~~~~~~~~~~~gp~r~~~~g---IaE~~~v~~AaGlA~~-G~~p~~~~~ 117 (305)
..+...|.+.+.. |. ++ +..|++... +. ...+ . |.+|+..+ .-= ..+..|.|+|++ .-++++++
T Consensus 377 ~~v~~~l~~~l~~~~~~-iv-~~~d~G~~~-~~-~~~~---~-~~~~~~~~~~g~mG-~~l~~A~G~ala~~~~~vv~i- 446 (565)
T 2nxw_A 377 MDIARAVNDRVRAGQEP-LL-IAADMGDCL-FT-AMDM---I-DAGLMAPGYYAGMG-FGVPAGIGAQCVSGGKRILTV- 446 (565)
T ss_dssp HHHHHHHHHHHHTTCCC-CE-EEECSSHHH-HH-HTTS---C-CSCEECCTTTCCTT-CHHHHHHHHHHHTTTCCEEEE-
T ss_pred HHHHHHHHHhcccccCC-EE-EEecchHHH-HH-HHhC---C-CcEEEccCcccccc-ccchHHHHHHHhCCCCcEEEE-
Confidence 4455677777765 43 33 245655211 10 1112 2 56676532 111 256678888765 23555554
Q ss_pred ccchH-HhHHHHHHHHHhhcccccCCCcccceeEEEcCCcCC-----CCCCC---CCCchHHHHHccCCCcEEEeeCCHH
Q 021963 118 FADYI-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV-----GHGGH---YHSQSPEAFFCHVPGLKVVIPRSPR 188 (305)
Q Consensus 118 ~~~F~-~ra~dqi~~~~a~~~~~~~~~~~v~~lv~~~~~g~~-----~~~g~---~hs~~d~a~~~~iP~l~V~~P~d~~ 188 (305)
.++.. +..+..+. .++..+ +|+ .+|+...++.. ...+. .+..+-..+.+.+ |+..+...+.+
T Consensus 447 ~GDG~~~~~~~~l~-ta~~~~------l~~-~ivv~nN~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~ 517 (565)
T 2nxw_A 447 VGDGAFQMTGWELG-NCRRLG------IDP-IVILFNNASWEMLRTFQPESAFNDLDDWRFADMAAGM-GGDGVRVRTRA 517 (565)
T ss_dssp EEHHHHHHHGGGGG-GHHHHT------CCC-EEEEEECSBCHHHHHHCTTCGGGBCCCCCHHHHTGGG-TSEEEEECBHH
T ss_pred EechHHHhhHHHHH-HHHHhC------CCC-EEEEEECCCCcEEeeecccCCCCcCCCCCHHHHHHHc-CCCEEEeCCHH
Confidence 56632 11111111 122222 455 55544433321 01111 1111222344444 67777888999
Q ss_pred HHHHHHHHhHhCCCCE-EE
Q 021963 189 QAKGLLLSCIRDPNPV-VF 206 (305)
Q Consensus 189 e~~~~l~~a~~~~~Pv-~i 206 (305)
|+...++++++.++|+ +|
T Consensus 518 el~~al~~a~~~~gp~~li 536 (565)
T 2nxw_A 518 ELKAALDKAFATRGRFQLI 536 (565)
T ss_dssp HHHHHHHHHHHCCSSCEEE
T ss_pred HHHHHHHHHHhcCCCeEEE
Confidence 9999999999988898 55
No 149
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=37.00 E-value=96 Score=24.69 Aligned_cols=56 Identities=9% Similarity=-0.005 Sum_probs=36.0
Q ss_pred ChhHHHHHHHHHHHHhcC--CCeEEEEeccc--cCCC------------------------HHHHHHHHhccCcEEEEeC
Q 021963 247 GAQLSIMEQACLDAEKEG--ISCELIDLKTL--IPWD------------------------KETVEASVRKTGRLLPRSS 298 (305)
Q Consensus 247 G~~~~~aleAa~~L~~~G--i~~~vI~~~~i--~P~d------------------------~~~i~~~~~~~~~vvvvEe 298 (305)
|.+-..+..+++.|++.| .+++++|+... .|++ .+.+.+.+...+.||++=.
T Consensus 16 s~t~~la~~~~~~l~~~g~~~~v~~~dl~~~~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~aD~iv~~~P 95 (201)
T 1t5b_A 16 SQSGQLTDYFIEQWREKHVADEITVRDLAANPVPVLDGELVGAMRPGDAPLTPRQQDALALSDELIAELKAHDVIVIAAP 95 (201)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCEEEEEETTTSCCCCCCHHHHHHTC--CCCCCHHHHHHHHHHHHHHHHHHHCSEEEEECC
T ss_pred ChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCCCCCCHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHhCCEEEEEeC
Confidence 334455556667787766 89999999864 2232 1234566777888888766
Q ss_pred Cccc
Q 021963 299 GYWR 302 (305)
Q Consensus 299 ~~~~ 302 (305)
-|..
T Consensus 96 ~y~~ 99 (201)
T 1t5b_A 96 MYNF 99 (201)
T ss_dssp CBTT
T ss_pred cccC
Confidence 6543
No 150
>2qas_A SSPB, hypothetical protein; SSPB, adaptor, CLPX, unknown function, hydrolase activator; 2.55A {Caulobacter vibrioides} PDB: 2qaz_A
Probab=36.85 E-value=6.3 Score=31.89 Aligned_cols=71 Identities=17% Similarity=0.197 Sum_probs=53.2
Q ss_pred cHHHHHHHHHHHHHhcC----CCEEEEecccCCCcccccchhhHhhhCCC--------cEEecchhHHHHHHHHHHHHhC
Q 021963 41 NLYSAINQALHIALETD----PRAYVFGEDVGFGGVFRCTTGLADRFGKS--------RVFNTPLCEQGIVGFAIGLAAM 108 (305)
Q Consensus 41 ~~r~a~~~~L~~l~~~~----~~iv~~~~D~~~g~~~~~~~~~~~~~gp~--------r~~~~gIaE~~~v~~AaGlA~~ 108 (305)
.+|.++.++|.+.++.. ..-+.|+=+....|+- ..+.++++| |+ +|.|.-+.|.+ +..+|+..
T Consensus 23 AlrgVvr~vL~~va~~g~LPg~HHFyITF~T~~pGV~-i~d~L~~~Y-P~EMTIVLQhQF~dL~V~e~~---FsV~LsFg 97 (157)
T 2qas_A 23 ALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVS-GPQDLLSKY-PDEMTIVLQHQYWDLAPGETF---FSVTLKFG 97 (157)
T ss_dssp HHHHHHHHHHHHHSSTTCSCTTCCEEEEEETTSTTCB-CCHHHHHHS-SSEEEEEESSSCEEEEECSSE---EEEEEEET
T ss_pred HHHHHHHHHHHHHHHcCCCCCccEEEEEEecCCCCcc-CCHHHHhhC-CCceEEEEEeeecCcEEecCc---EEEEEEeC
Confidence 47888999999988877 4557777776543432 468999999 76 68999999986 77888888
Q ss_pred CCeEEEEe
Q 021963 109 GNRAIAEI 116 (305)
Q Consensus 109 G~~p~~~~ 116 (305)
|..--..+
T Consensus 98 g~pe~L~I 105 (157)
T 2qas_A 98 GQPKRLSV 105 (157)
T ss_dssp TEEEEEEE
T ss_pred CeeeEEEe
Confidence 87544444
No 151
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=36.71 E-value=86 Score=21.48 Aligned_cols=27 Identities=11% Similarity=-0.010 Sum_probs=23.5
Q ss_pred hHHHHHHHHHHHHhcCCCeEEEEeccc
Q 021963 249 QLSIMEQACLDAEKEGISCELIDLKTL 275 (305)
Q Consensus 249 ~~~~aleAa~~L~~~Gi~~~vI~~~~i 275 (305)
.-..|.+|.+.|++.|++.+.+|+...
T Consensus 13 ~Cp~C~~ak~~L~~~gi~y~~idI~~~ 39 (87)
T 1aba_A 13 KCGPCDNAKRLLTVKKQPFEFINIMPE 39 (87)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEESCSB
T ss_pred cCccHHHHHHHHHHcCCCEEEEEeecc
Confidence 457899999999999999999999754
No 152
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=36.65 E-value=82 Score=28.86 Aligned_cols=56 Identities=11% Similarity=0.169 Sum_probs=38.3
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEecc---------------ccCCCHHHHHHHHhccCcEEEEe
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKT---------------LIPWDKETVEASVRKTGRLLPRS 297 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~---------------i~P~d~~~i~~~~~~~~~vvvvE 297 (305)
++..+.|++.|.......+++++ .|+++-++| .. ....|.+.|.+.+++. .++++|
T Consensus 23 ~~~~I~ilGgG~lg~~l~~aa~~---lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~-d~i~~e 93 (403)
T 3k5i_A 23 NSRKVGVLGGGQLGRMLVESANR---LNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTC-DVVTAE 93 (403)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHH---HTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTC-SEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---CCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhC-CEEEEC
Confidence 45689999999766555555554 499999998 32 1223567888888775 467765
No 153
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=36.30 E-value=1.2e+02 Score=23.32 Aligned_cols=62 Identities=16% Similarity=0.174 Sum_probs=40.6
Q ss_pred cEEEEEeCh-hHHHHHHHHHHHHhcCCCeEEEEeccccCCCH--HHHHHHHhcc----CcEEEEeCCccc
Q 021963 240 DITLVGWGA-QLSIMEQACLDAEKEGISCELIDLKTLIPWDK--ETVEASVRKT----GRLLPRSSGYWR 302 (305)
Q Consensus 240 dv~Iia~G~-~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~--~~i~~~~~~~----~~vvvvEe~~~~ 302 (305)
.++|++.|. ......++++.+-.+ -.+..||++-=...+. +.+.+.+++. +-+|.++.+++.
T Consensus 6 giiivsHG~~~A~~l~~~a~~i~G~-~~~~aid~~~~~~~~~~~~~i~~~i~~~d~~~GVLiL~DmGSp~ 74 (130)
T 3gx1_A 6 EVIVMMHGRSTATSMVETVQELLSI-ESGIALDMPLTVEVKAMYEKLKQTVVKLNPVKGVLILSDMGSLT 74 (130)
T ss_dssp EEEEEEESSSHHHHHHHHHHHHHTC-CCCEEEEECTTSCHHHHHHHHHHHHHTSCCTTCEEEEECSGGGG
T ss_pred EEEEEcCCHHHHHHHHHHHHHHcCc-cCEEEEEecCCCCHHHHHHHHHHHHHhhCCCCCEEEEEeCCCHH
Confidence 588999999 888888999987654 5777888755332221 3455556543 346666665543
No 154
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=36.20 E-value=57 Score=27.94 Aligned_cols=44 Identities=16% Similarity=0.174 Sum_probs=32.1
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHH
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETV 283 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i 283 (305)
.+++++||+.|.. ++|.+..|.+.|.+|.++....-.+.+.+..
T Consensus 151 ~~~~vvViGgG~i---g~e~A~~l~~~G~~Vt~v~~~~~~~~~~~~~ 194 (314)
T 4a5l_A 151 RNKVLMVVGGGDA---AMEEALHLTKYGSKVIILHRRDAFRASKTMQ 194 (314)
T ss_dssp TTSEEEEECSSHH---HHHHHHHHTTTSSEEEEECSSSSCCSCHHHH
T ss_pred CCCeEEEECCChH---HHHHHHHHHHhCCeeeeecccccccccchhh
Confidence 4678999998874 6677888888899999998554444444433
No 155
>2fi9_A Outer membrane protein; bartonella hense protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bartonella henselae} SCOP: c.103.1.1
Probab=36.18 E-value=13 Score=28.97 Aligned_cols=37 Identities=19% Similarity=0.246 Sum_probs=27.4
Q ss_pred CCcEEEEEeChhHH-HHHHHHHHHHhcCCCeEEEEecc
Q 021963 238 GSDITLVGWGAQLS-IMEQACLDAEKEGISCELIDLKT 274 (305)
Q Consensus 238 g~dv~Iia~G~~~~-~aleAa~~L~~~Gi~~~vI~~~~ 274 (305)
..|++||++|.... .--+..+.|++.||.+++.|-+.
T Consensus 68 ~pevliiGtG~~~~~l~p~~~~~l~~~GI~vE~m~T~a 105 (128)
T 2fi9_A 68 QIEVLLIGTGVELLRLPEELRVLLWEKRISSDTMSTGA 105 (128)
T ss_dssp GCSEEEEECTTSCCCCCHHHHHHHHHTTCEEEEECHHH
T ss_pred CCCEEEECCCCCCCCCCHHHHHHHHHcCCEEEEeCHHH
Confidence 47999999998642 22345578889999999887543
No 156
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=36.08 E-value=33 Score=29.18 Aligned_cols=38 Identities=5% Similarity=-0.011 Sum_probs=27.6
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHh---cCCCeEEEEecccc
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEK---EGISCELIDLKTLI 276 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~---~Gi~~~vI~~~~i~ 276 (305)
..-++|-||++...+.+.|+.|.+ .|+++.|+++....
T Consensus 40 ~~kv~IlYgS~tGnte~~A~~La~~l~~g~~v~v~~l~~~~ 80 (219)
T 3hr4_A 40 RVRVTILFATETGKSEALAWDLGALFSCAFNPKVVCMDKYR 80 (219)
T ss_dssp SCEEEEEEECSSSHHHHHHHHHHHHHTTTSEEEEEEGGGCC
T ss_pred CCcEEEEEECCchHHHHHHHHHHHHHHcCCCeEEEEcccCC
Confidence 344667788888888887776653 48888888877653
No 157
>2bmv_A Flavodoxin; electron transport, flavoprotein, FMN, transport protein; 2.11A {Helicobacter pylori} PDB: 2w5u_A* 1fue_A*
Probab=36.01 E-value=55 Score=25.58 Aligned_cols=47 Identities=17% Similarity=0.201 Sum_probs=30.0
Q ss_pred EEEEeChhHHHHHHHHHHHHhc-CCCeEEEEeccccCCCHHHHHHHHhccCcEEEE
Q 021963 242 TLVGWGAQLSIMEQACLDAEKE-GISCELIDLKTLIPWDKETVEASVRKTGRLLPR 296 (305)
Q Consensus 242 ~Iia~G~~~~~aleAa~~L~~~-Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvv 296 (305)
++|.|++......+.|+.+.+. |. ++++++... +.+. +.+++.|++.
T Consensus 4 ~~I~Y~S~tGnT~~~A~~ia~~lg~-~~~~~~~~~---~~~~----l~~~d~ii~g 51 (164)
T 2bmv_A 4 IGIFFGTDSGNAEAIAEKISKAIGN-AEVVDVAKA---SKEQ----FNSFTKVILV 51 (164)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHCS-EEEEEGGGC---CHHH----HTTCSEEEEE
T ss_pred EEEEEECCCchHHHHHHHHHHHcCC-cEEEecccC---CHhH----HhhCCEEEEE
Confidence 3566888888888888877654 66 777776543 3222 3456666654
No 158
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0
Probab=35.73 E-value=99 Score=27.29 Aligned_cols=68 Identities=9% Similarity=0.148 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEecccCCCcccccchhhH----hhhCCC---cEEec---chhHHHHHHHHHHHHhCCC
Q 021963 42 LYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLA----DRFGKS---RVFNT---PLCEQGIVGFAIGLAAMGN 110 (305)
Q Consensus 42 ~r~a~~~~L~~l~~~~~~iv~~~~D~~~g~~~~~~~~~~----~~~gp~---r~~~~---gIaE~~~v~~AaGlA~~G~ 110 (305)
.-..|.+.+.++.++..+|++++=-.+.+|+|......+ ++| |+ +++|+ +..+..++--|+=++..|.
T Consensus 69 s~~~~~~~f~~l~~~g~~ii~i~iSs~LSGTy~sA~~aa~~~~e~~-~~~~I~ViDS~~~s~g~g~~v~~A~~l~~~G~ 146 (297)
T 3nyi_A 69 SVESYADVFRSFVEQGFPVVCFTITTLFSGSYNSAINAKSLVLEDY-PDANICVIDSKQNTVTQALLIDQFVRMLEDGL 146 (297)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEESCTTTCSHHHHHHHHHHHHHHHC-TTCCEEEEECSCCHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHCCCeEEEEECCCcHhHHHHHHHHHHHHHHhhC-CCCeEEEEeCCchHHHHHHHHHHHHHHHHcCC
Confidence 356788888999998889988875555556664333333 678 66 56774 5567777777888888885
No 159
>2gm2_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Xanthomonas campestris PV}
Probab=35.69 E-value=12 Score=29.27 Aligned_cols=40 Identities=15% Similarity=0.183 Sum_probs=29.1
Q ss_pred eeeCCcEEEEEeChhHH-HHHHHHHHHHhcCCCeEEEEecc
Q 021963 235 IREGSDITLVGWGAQLS-IMEQACLDAEKEGISCELIDLKT 274 (305)
Q Consensus 235 ~~~g~dv~Iia~G~~~~-~aleAa~~L~~~Gi~~~vI~~~~ 274 (305)
+..+.|++||++|.... .--+..+.|++.||.+++.|-+.
T Consensus 61 l~~~pevliiGTG~~~~~l~p~~~~~l~~~GI~vE~m~T~a 101 (132)
T 2gm2_A 61 LALNPAVILLGTGERQQFPSTDVLAACLTRGIGLEAMTNAA 101 (132)
T ss_dssp HHHCCSEEEEECTTSCCCCCHHHHHHHHHHTCEEEEECHHH
T ss_pred HhcCCCEEEECCCCCCCcCCHHHHHHHHHcCCEEEEeCHHH
Confidence 34458999999998653 22345568888899999987543
No 160
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=35.46 E-value=1.5e+02 Score=24.21 Aligned_cols=48 Identities=13% Similarity=-0.001 Sum_probs=33.0
Q ss_pred CcEEEEEeCh-hHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHh
Q 021963 239 SDITLVGWGA-QLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR 288 (305)
Q Consensus 239 ~dv~Iia~G~-~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~ 288 (305)
..+.||.-|. -...+.+|++.|++-|+..+ +.+-++.-.+++. .++++
T Consensus 12 ~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~d-v~V~SaHR~p~~l-~~~~~ 60 (170)
T 1xmp_A 12 SLVGVIMGSTSDWETMKYACDILDELNIPYE-KKVVSAHRTPDYM-FEYAE 60 (170)
T ss_dssp CSEEEEESSGGGHHHHHHHHHHHHHTTCCEE-EEECCTTTSHHHH-HHHHH
T ss_pred CcEEEEECcHHHHHHHHHHHHHHHHcCCCEE-EEEEeccCCHHHH-HHHHH
Confidence 4566666554 47889999999999999865 4555566666554 35554
No 161
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=35.37 E-value=52 Score=23.57 Aligned_cols=38 Identities=8% Similarity=0.107 Sum_probs=29.5
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccC
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIP 277 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P 277 (305)
.+++|.+. .....|.+|...|++.|++.+.+|+....+
T Consensus 22 ~~v~ly~~-~~Cp~C~~ak~~L~~~~i~y~~vdI~~~~~ 59 (103)
T 3nzn_A 22 GKVIMYGL-STCVWCKKTKKLLTDLGVDFDYVYVDRLEG 59 (103)
T ss_dssp SCEEEEEC-SSCHHHHHHHHHHHHHTBCEEEEEGGGCCH
T ss_pred CeEEEEcC-CCCchHHHHHHHHHHcCCCcEEEEeeccCc
Confidence 45666543 556889999999999999999999887543
No 162
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=35.30 E-value=43 Score=25.80 Aligned_cols=33 Identities=12% Similarity=0.166 Sum_probs=24.9
Q ss_pred CCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEec
Q 021963 238 GSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (305)
Q Consensus 238 g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~ 273 (305)
+.+++|+++|.... ..++.|.+.|.++.+|+..
T Consensus 3 ~~~vlI~G~G~vG~---~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAI---NTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHH---HHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHH---HHHHHHHHCCCCEEEEECC
Confidence 35788999887664 3456777789999999874
No 163
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=35.21 E-value=1e+02 Score=30.43 Aligned_cols=36 Identities=11% Similarity=0.100 Sum_probs=28.3
Q ss_pred HHHccCCCcEEEeeC---CHHHHHHHHHHhHhCCCCEEEe
Q 021963 171 AFFCHVPGLKVVIPR---SPRQAKGLLLSCIRDPNPVVFF 207 (305)
Q Consensus 171 a~~~~iP~l~V~~P~---d~~e~~~~l~~a~~~~~Pv~i~ 207 (305)
..++.. |+.++.+. |.+++..+++.+.+.++|++|.
T Consensus 207 ~~~~a~-G~~~~~~vdG~d~~~l~~al~~a~~~~~P~lI~ 245 (651)
T 2e6k_A 207 ARYRAY-GWQTLRVEDVNDLEALRKAIKLAKLDERPTLIA 245 (651)
T ss_dssp HHHHHT-TCEEEEESCTTCHHHHHHHHHHHHHSSSCEEEE
T ss_pred HHHHhC-CCeEEEEeCCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 455665 88887443 7899999999998888999884
No 164
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=34.66 E-value=31 Score=30.54 Aligned_cols=31 Identities=32% Similarity=0.379 Sum_probs=24.2
Q ss_pred cEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEec
Q 021963 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (305)
Q Consensus 240 dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~ 273 (305)
||+||+.|..-. -+|-.|.+.|++|.|++-.
T Consensus 6 DViIVGaGpaGl---~~A~~La~~G~~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGS---TAARYAAKYGLKTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHH---HHHHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHHHH---HHHHHHHHCCCcEEEEeCC
Confidence 899999988533 3456788889999999853
No 165
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=34.62 E-value=25 Score=25.48 Aligned_cols=36 Identities=19% Similarity=0.214 Sum_probs=28.7
Q ss_pred CcEEEEEeC----hhHHHHHHHHHHHHhcCCCeEEEEecc
Q 021963 239 SDITLVGWG----AQLSIMEQACLDAEKEGISCELIDLKT 274 (305)
Q Consensus 239 ~dv~Iia~G----~~~~~aleAa~~L~~~Gi~~~vI~~~~ 274 (305)
.+++|.+.| .....|.+|.+.|++.|++...+|+..
T Consensus 17 ~~vvvf~~g~~~~~~C~~C~~~~~~L~~~~i~~~~vdi~~ 56 (105)
T 2yan_A 17 ASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILE 56 (105)
T ss_dssp SSEEEEESBCSSSBCTTHHHHHHHHHHHHTCCCEEEEGGG
T ss_pred CCEEEEEecCCCCCCCccHHHHHHHHHHCCCCeEEEECCC
Confidence 357777765 445788889999999999999999875
No 166
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=34.56 E-value=73 Score=25.88 Aligned_cols=52 Identities=8% Similarity=0.031 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEeccccCCC----------HHHHHHHHhccCcEEEEeCCccc
Q 021963 250 LSIMEQACLDAEKEGISCELIDLKTLIPWD----------KETVEASVRKTGRLLPRSSGYWR 302 (305)
Q Consensus 250 ~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d----------~~~i~~~~~~~~~vvvvEe~~~~ 302 (305)
...+..+++.++ .|.+++++|+.-+-.++ .+.+.+.+...+.+|+.-.-|..
T Consensus 19 ~~la~~~~~~~~-~~~~v~~~dl~~lp~~~~~~~~~~~~~~~~~~~~i~~AD~iV~~sP~y~~ 80 (192)
T 3fvw_A 19 RQLAKKAETIIG-DRAQVSYLSYDRVPFFNQDLETSVHPEVAHAREEVQEADAIWIFSPVYNY 80 (192)
T ss_dssp HHHHHHHHHHHT-TSSEEEECCCSSCCCCCGGGTTSCCHHHHHHHHHHHHCSEEEEECCCBTT
T ss_pred HHHHHHHHHhcC-CCCEEEEEeCccCCCCCcccccCCcHHHHHHHHHHHhCCEEEEECccccc
Confidence 344445556665 68999999998652222 24566778888889887766654
No 167
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=34.24 E-value=84 Score=23.01 Aligned_cols=37 Identities=11% Similarity=0.196 Sum_probs=29.7
Q ss_pred CCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccc
Q 021963 238 GSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTL 275 (305)
Q Consensus 238 g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i 275 (305)
..+++|.+. +....|.+|.+.|++.|++.+.+|+...
T Consensus 16 ~~~v~vy~~-~~Cp~C~~ak~~L~~~~i~~~~~dvd~~ 52 (114)
T 3h8q_A 16 RSRVVIFSK-SYCPHSTRVKELFSSLGVECNVLELDQV 52 (114)
T ss_dssp HCSEEEEEC-TTCHHHHHHHHHHHHTTCCCEEEETTTS
T ss_pred cCCEEEEEc-CCCCcHHHHHHHHHHcCCCcEEEEecCC
Confidence 456777665 5678899999999999999999998753
No 168
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=34.22 E-value=41 Score=26.43 Aligned_cols=31 Identities=26% Similarity=0.328 Sum_probs=24.8
Q ss_pred cEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEec
Q 021963 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (305)
Q Consensus 240 dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~ 273 (305)
+++||+.|.. .++++..|.+.|.++.+|+-.
T Consensus 3 ~vvIIGgG~~---Gl~~A~~l~~~g~~v~lie~~ 33 (180)
T 2ywl_A 3 DVIVVGGGPS---GLSAALFLARAGLKVLVLDGG 33 (180)
T ss_dssp EEEEECCSHH---HHHHHHHHHHTTCCEEEEECS
T ss_pred eEEEECCCHH---HHHHHHHHHHCCCcEEEEeCC
Confidence 6889999874 456677787889999999964
No 169
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=34.11 E-value=37 Score=29.37 Aligned_cols=30 Identities=23% Similarity=0.378 Sum_probs=23.2
Q ss_pred cEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEe
Q 021963 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (305)
Q Consensus 240 dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~ 272 (305)
|++||+.|..- +.||..|++.|.++.||+-
T Consensus 8 DvvIIG~GpAG---l~aA~~l~~~g~~V~liE~ 37 (312)
T 4gcm_A 8 DIAIIGAGPAG---MTAAVYASRANLKTVMIER 37 (312)
T ss_dssp EEEEECCSHHH---HHHHHHHHHTTCCEEEEES
T ss_pred CEEEECCCHHH---HHHHHHHHHCCCCEEEEec
Confidence 89999999743 3455667777999999973
No 170
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=33.99 E-value=1.2e+02 Score=28.03 Aligned_cols=25 Identities=8% Similarity=-0.049 Sum_probs=20.0
Q ss_pred eeCCHHHHHHHHHHhHh----CCCCEEEe
Q 021963 183 IPRSPRQAKGLLLSCIR----DPNPVVFF 207 (305)
Q Consensus 183 ~P~d~~e~~~~l~~a~~----~~~Pv~i~ 207 (305)
.-.|+.++..+++.|++ .++|++|-
T Consensus 254 dG~D~~av~~a~~~A~~~ar~~~~P~lIe 282 (400)
T 2bfd_A 254 DGNDVFAVYNATKEARRRAVAENQPFLIE 282 (400)
T ss_dssp ETTCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred eCCCHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 33478999999998886 58999884
No 171
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=33.90 E-value=24 Score=29.83 Aligned_cols=40 Identities=15% Similarity=0.047 Sum_probs=29.0
Q ss_pred eCCcEEEEEeChhHHH--HHHHHHHHHhcCCCeEEEEecccc
Q 021963 237 EGSDITLVGWGAQLSI--MEQACLDAEKEGISCELIDLKTLI 276 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~--aleAa~~L~~~Gi~~~vI~~~~i~ 276 (305)
+|+++++.-+|+.... +.+.++.|++.|.++.||=-+.-.
T Consensus 4 ~~k~IllgiTGsiaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 4 KGKRIGFGFTGSHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TTCEEEEEECSCGGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCCEEEEEEEChHHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 3567888888876544 788889998899999988665544
No 172
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=33.90 E-value=1.1e+02 Score=30.58 Aligned_cols=39 Identities=10% Similarity=0.010 Sum_probs=28.9
Q ss_pred HHHccCCCcEEEee---CCHHHHHHHHHHhHh-CCCCEEEeccc
Q 021963 171 AFFCHVPGLKVVIP---RSPRQAKGLLLSCIR-DPNPVVFFEPK 210 (305)
Q Consensus 171 a~~~~iP~l~V~~P---~d~~e~~~~l~~a~~-~~~Pv~i~~~~ 210 (305)
..+++. |+.++.- .|..++..+++.|.+ .++|++|....
T Consensus 225 ~~~~a~-G~~~~~V~DG~D~~al~~Al~~A~~~~~~P~lI~~~T 267 (700)
T 3rim_A 225 ARYRAY-GWHVQEVEGGENVVGIEEAIANAQAVTDRPSFIALRT 267 (700)
T ss_dssp HHHHHH-TCEEEEEECTTCHHHHHHHHHHHHHCCSSCEEEEEEC
T ss_pred HHHHHc-CCeEEEECCCCCHHHHHHHHHHHHHcCCCCEEEEEEE
Confidence 445555 6777765 588999999999987 58999995443
No 173
>3cpk_A Uncharacterized protein Q7W7N7_borpa; BPP2477, BER31, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Bordetella parapertussis 12822} PDB: 2k2e_A
Probab=33.41 E-value=17 Score=29.27 Aligned_cols=37 Identities=19% Similarity=0.300 Sum_probs=27.7
Q ss_pred CCcEEEEEeChhHH-HHHHHHHHHHhcCCCeEEEEecc
Q 021963 238 GSDITLVGWGAQLS-IMEQACLDAEKEGISCELIDLKT 274 (305)
Q Consensus 238 g~dv~Iia~G~~~~-~aleAa~~L~~~Gi~~~vI~~~~ 274 (305)
+.|++||++|.... .--+..+.|++.||.+++.|-..
T Consensus 88 ~pEvliiGTG~~~~~l~p~~~~~L~~~GIgvE~M~T~a 125 (150)
T 3cpk_A 88 APEVLLVGTGRRQHLLGPEQVRPLLAMGVGVEAMDTQA 125 (150)
T ss_dssp CCSEEEEECTTSCCCCCHHHHHHHHTTTCEEEEECHHH
T ss_pred CCCEEEEcCCCCCCCCCHHHHHHHHHcCCEEEEeCHHH
Confidence 46999999998653 23345678899999999887543
No 174
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=33.28 E-value=85 Score=25.41 Aligned_cols=55 Identities=7% Similarity=0.068 Sum_probs=35.8
Q ss_pred hhHHHHHHHHHHHHhcC--CCeEEEEec--cc--cCCCH-----------------------------HHHHHHHhccCc
Q 021963 248 AQLSIMEQACLDAEKEG--ISCELIDLK--TL--IPWDK-----------------------------ETVEASVRKTGR 292 (305)
Q Consensus 248 ~~~~~aleAa~~L~~~G--i~~~vI~~~--~i--~P~d~-----------------------------~~i~~~~~~~~~ 292 (305)
.+...+..+++.|++.| .+++++|+. .. .+++. +.+.+.+...+.
T Consensus 18 ~t~~la~~~~~~~~~~g~~~~v~~~dL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ 97 (208)
T 2hpv_A 18 RSVRALETFLASYRETNPSDEIEILDVYAPETNMPEIDEELLSAWGALRAGAAFETLSENQQQKVARFNELTDQFLSADK 97 (208)
T ss_dssp HHHHHHHHHHHHHHHHCTTSEEEEEETTCGGGCCCCCCHHHHHHHHHHHHTCCGGGSCHHHHHHHHHHHHHHHHHHHCSE
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEEeeCCcccCCCCcCCHHHHHhhcCcccccccccCCHHHHhhHHHHHHHHHHHHhCCE
Confidence 34445556677888777 999999998 64 34432 224456677788
Q ss_pred EEEEeCCccc
Q 021963 293 LLPRSSGYWR 302 (305)
Q Consensus 293 vvvvEe~~~~ 302 (305)
||++=.-|+.
T Consensus 98 iv~~~P~y~~ 107 (208)
T 2hpv_A 98 VVIANPMWNL 107 (208)
T ss_dssp EEEEEECBTT
T ss_pred EEEEeccccC
Confidence 8877665543
No 175
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=33.07 E-value=95 Score=27.89 Aligned_cols=57 Identities=11% Similarity=0.148 Sum_probs=36.9
Q ss_pred EEEEeChhH----HHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccCcEEEEeCCcc
Q 021963 242 TLVGWGAQL----SIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLPRSSGYW 301 (305)
Q Consensus 242 ~Iia~G~~~----~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvEe~~~ 301 (305)
++|.++++. ..|...++.|++.|++++++++. ..+.+.+.+.+.+++.+++.-..+.
T Consensus 255 v~i~y~S~~Gnt~~lA~~i~~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~d~ii~gsp~~~ 315 (402)
T 1e5d_A 255 VVIFYDSMWHSTEKMARVLAESFRDEGCTVKLMWCK---ACHHSQIMSEISDAGAVIVGSPTHN 315 (402)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEETT---TSCHHHHHHHHHTCSEEEEECCCBT
T ss_pred EEEEEECCChhHHHHHHHHHHHHHhCCCeEEEEECC---CCCHHHHHHHHHHCCEEEEECCccC
Confidence 445555544 33445556677778888888865 4566666666778887777655444
No 176
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=32.93 E-value=1.7e+02 Score=24.09 Aligned_cols=48 Identities=10% Similarity=-0.049 Sum_probs=33.2
Q ss_pred CcEEEEEeCh-hHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHh
Q 021963 239 SDITLVGWGA-QLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR 288 (305)
Q Consensus 239 ~dv~Iia~G~-~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~ 288 (305)
.++.||.-|. -...+.+|++.|++-|+..+ +.+-+++-.+++. .++++
T Consensus 22 ~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~d-v~V~SaHR~p~~l-~~~~~ 70 (182)
T 1u11_A 22 PVVGIIMGSQSDWETMRHADALLTELEIPHE-TLIVSAHRTPDRL-ADYAR 70 (182)
T ss_dssp CSEEEEESSGGGHHHHHHHHHHHHHTTCCEE-EEECCTTTCHHHH-HHHHH
T ss_pred CEEEEEECcHHHHHHHHHHHHHHHHcCCCeE-EEEEcccCCHHHH-HHHHH
Confidence 3577666554 47889999999999999865 4555666666554 35554
No 177
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=32.35 E-value=67 Score=25.75 Aligned_cols=47 Identities=21% Similarity=0.169 Sum_probs=30.2
Q ss_pred ChhHHHHHHHHHHHHh-cCCCeEEEEeccccCCCHHHHHHHHhccCcEEEEeCCc
Q 021963 247 GAQLSIMEQACLDAEK-EGISCELIDLKTLIPWDKETVEASVRKTGRLLPRSSGY 300 (305)
Q Consensus 247 G~~~~~aleAa~~L~~-~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvEe~~ 300 (305)
|.+-..|...++.|++ .|++++++|+... +. +.+.+++.||+.=.-|
T Consensus 16 GnT~~~a~~i~~~l~~~~g~~v~~~~l~~~---~~----~~l~~aD~ii~gsP~y 63 (188)
T 2ark_A 16 GNTKKMAELVAEGARSLEGTEVRLKHVDEA---TK----EDVLWADGLAVGSPTN 63 (188)
T ss_dssp SHHHHHHHHHHHHHHTSTTEEEEEEETTTC---CH----HHHHHCSEEEEEEECB
T ss_pred cHHHHHHHHHHHHHhhcCCCeEEEEEhhhC---CH----HHHHhCCEEEEEeCcc
Confidence 4445566666777777 8999999997664 32 2345566677654444
No 178
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=32.25 E-value=1.4e+02 Score=23.19 Aligned_cols=62 Identities=15% Similarity=0.119 Sum_probs=40.9
Q ss_pred cEEEEEeCh-hHHHHHHHHHHHHhcCCCeEEEEeccccCCC--HHHHHHHHhc------cCcEEEEeCCccc
Q 021963 240 DITLVGWGA-QLSIMEQACLDAEKEGISCELIDLKTLIPWD--KETVEASVRK------TGRLLPRSSGYWR 302 (305)
Q Consensus 240 dv~Iia~G~-~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d--~~~i~~~~~~------~~~vvvvEe~~~~ 302 (305)
.++|++.|. ......++++.+-.+ -.+..+|++-=...+ .+.+.+.+++ .+-+|.++.+++.
T Consensus 6 giiIvtHG~s~A~~l~~~a~~i~G~-~~~~aid~~~~~~~~~~~~~i~~~i~~~~~d~g~GVLiL~DmGSp~ 76 (139)
T 3gdw_A 6 GVFVLMHGDSTASSMLKTAQELLGT-SIGTAMNMPLTMEVQTMYEQLRNQVITQKESLNNGILLLTDMGSLN 76 (139)
T ss_dssp EEEEEEESSSHHHHHHHHHHHHHTC-CCCEEEEECTTSCHHHHHHHHHHHHHTSTGGGTTCEEEEECSGGGG
T ss_pred eEEEEcCCHHHHHHHHHHHHHHcCc-ccEEEEEccCCCCHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCCHH
Confidence 588999999 888888999987644 567777765543332 2445666654 2356667765553
No 179
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=32.15 E-value=1.9e+02 Score=23.60 Aligned_cols=48 Identities=8% Similarity=-0.031 Sum_probs=33.3
Q ss_pred CcEEEEEeChh-HHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHh
Q 021963 239 SDITLVGWGAQ-LSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR 288 (305)
Q Consensus 239 ~dv~Iia~G~~-~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~ 288 (305)
.++.||.-|.. ...+.+|++.|++-|+..+ +.+-+++-.+++. .++++
T Consensus 13 ~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~e-v~V~SaHR~p~~~-~~~~~ 61 (174)
T 3kuu_A 13 VKIAIVMGSKSDWATMQFAADVLTTLNVPFH-VEVVSAHRTPDRL-FSFAE 61 (174)
T ss_dssp CCEEEEESSGGGHHHHHHHHHHHHHTTCCEE-EEECCTTTCHHHH-HHHHH
T ss_pred CcEEEEECcHHHHHHHHHHHHHHHHcCCCEE-EEEEcccCCHHHH-HHHHH
Confidence 35777765544 7889999999999999875 4555666666544 35554
No 180
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=31.95 E-value=1.2e+02 Score=30.00 Aligned_cols=37 Identities=8% Similarity=0.130 Sum_probs=28.5
Q ss_pred HHHccCCCcEEEeeC----CHHHHHHHHHHhHh-CCCCEEEec
Q 021963 171 AFFCHVPGLKVVIPR----SPRQAKGLLLSCIR-DPNPVVFFE 208 (305)
Q Consensus 171 a~~~~iP~l~V~~P~----d~~e~~~~l~~a~~-~~~Pv~i~~ 208 (305)
..+++. |+.++.+. |.+++..+++.|.+ .++|++|..
T Consensus 216 ~~~~a~-G~~~~~~vdG~~d~~~l~~al~~a~~~~~~P~lI~~ 257 (675)
T 1itz_A 216 TRFEAL-GWHTIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIKV 257 (675)
T ss_dssp HHHHHT-TCEEEEESCTTTCHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred HHHHhC-CCEEEEEecCCCCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 456666 88887443 78899999999987 589998853
No 181
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=31.93 E-value=68 Score=28.93 Aligned_cols=57 Identities=5% Similarity=0.127 Sum_probs=37.8
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEec----------------cccC---CCHHHHHHHHhccCcEEE
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK----------------TLIP---WDKETVEASVRKTGRLLP 295 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~----------------~i~P---~d~~~i~~~~~~~~~vvv 295 (305)
+|++++||+.|.++... ++..|...|-.+.|.|.. +..+ .+.+.+.+.++..+-||+
T Consensus 176 ~gk~vvVIG~G~iVG~~--~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIs 251 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRP--LAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT 251 (320)
T ss_dssp TTCEEEEECCCTTTHHH--HHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEECCCcchHHH--HHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEE
Confidence 46789999999876654 456677778888887542 1111 344677788877764443
No 182
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=31.10 E-value=56 Score=26.93 Aligned_cols=50 Identities=16% Similarity=0.093 Sum_probs=32.4
Q ss_pred HHHHHHHHHhcCCCeE-EEEeccccCCC-----------HHHHHHHHhccCcEEEEeCCcccc
Q 021963 253 MEQACLDAEKEGISCE-LIDLKTLIPWD-----------KETVEASVRKTGRLLPRSSGYWRF 303 (305)
Q Consensus 253 aleAa~~L~~~Gi~~~-vI~~~~i~P~d-----------~~~i~~~~~~~~~vvvvEe~~~~~ 303 (305)
+..+++.+ ++|.+++ ++|+.-+-.++ .+.+.+.++..+.+|++-.-|.++
T Consensus 26 a~~~~~~~-~~g~~v~~~idL~~lP~~~~~~~~~~~~~~~~~~~~~i~~AD~iVi~tP~Y~~s 87 (199)
T 4hs4_A 26 ARALPEIA-PEGIAITPLGSIGTFPHYSQDVQEEGFPAPVLTMAQQIATADAVVIVTPEYNYS 87 (199)
T ss_dssp HHHHHHHC-CTTEEEEECCCGGGSCCCCHHHHHHCCCHHHHHHHHHHHHSSEEEEEECCBTTB
T ss_pred HHHHHHHc-cCCCEEEEEEehhhcCCCCccccccCCCHHHHHHHHHHHhCCEEEEEcCccCCC
Confidence 33344444 3588999 99997752232 234667788888898887766544
No 183
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=30.65 E-value=1.4e+02 Score=26.45 Aligned_cols=21 Identities=10% Similarity=0.074 Sum_probs=11.1
Q ss_pred CHHHHHHHHhccCcEEEEeCC
Q 021963 279 DKETVEASVRKTGRLLPRSSG 299 (305)
Q Consensus 279 d~~~i~~~~~~~~~vvvvEe~ 299 (305)
|.+.|.+.+++++.++++++-
T Consensus 156 ~l~~i~~l~~~~~~~li~Dea 176 (411)
T 3nnk_A 156 PLAELGEICRRYDALFYTDAT 176 (411)
T ss_dssp CCTTHHHHHHHHTCEEEEECT
T ss_pred cHHHHHHHHHHcCCEEEEECC
Confidence 344555666665555555543
No 184
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=30.62 E-value=1.1e+02 Score=30.43 Aligned_cols=36 Identities=8% Similarity=0.054 Sum_probs=27.2
Q ss_pred HHHccCCCcEEEeeC----CHHHHHHHHHHhHh-CCCCEEEe
Q 021963 171 AFFCHVPGLKVVIPR----SPRQAKGLLLSCIR-DPNPVVFF 207 (305)
Q Consensus 171 a~~~~iP~l~V~~P~----d~~e~~~~l~~a~~-~~~Pv~i~ 207 (305)
..++.. |+.++.+. |.+++...++.|.+ .++|++|.
T Consensus 205 ~~~~a~-G~~~~~~vdG~~d~~~l~~al~~A~~~~~~P~lI~ 245 (680)
T 1gpu_A 205 KRYEAY-GWEVLYVENGNEDLAGIAKAIAQAKLSKDKPTLIK 245 (680)
T ss_dssp HHHHHH-TCEEEEESCTTTCHHHHHHHHHHHHHCTTSCEEEE
T ss_pred HHHHhc-CCeEEEEecCCCCHHHHHHHHHHHHHCCCCCEEEE
Confidence 355555 77777343 78899999999988 68999884
No 185
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 4dmu_B 2adf_A 1fe8_A 1ao3_A
Probab=30.58 E-value=37 Score=27.12 Aligned_cols=55 Identities=7% Similarity=0.118 Sum_probs=35.3
Q ss_pred EEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhcc--CcEEEEe
Q 021963 241 ITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKT--GRLLPRS 297 (305)
Q Consensus 241 v~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~--~~vvvvE 297 (305)
++|++.|.......++++.|++.|+.+-.|-+.. ..|.+.|+.++... ++++.++
T Consensus 112 vivltdg~~~~~~~~~~~~~~~~gi~v~~igvG~--~~~~~~L~~iA~~~~~~~~~~~~ 168 (189)
T 1atz_A 112 VVILVTDVSVDSVDAAADAARSNRVTVFPIGIGD--RYDAAQLRILAGPAGDSNVVKLQ 168 (189)
T ss_dssp EEEEECSCCSSCCHHHHHHHHHTTEEEEEEEESS--SSCHHHHHHHTGGGGGGGCEEES
T ss_pred EEEEeCCCCCchHHHHHHHHHHCCCEEEEEEcCC--cCCHHHHHHHHCCCcccCEEEec
Confidence 3455555433334567778888888777766653 36788887777654 3666665
No 186
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=30.57 E-value=1e+02 Score=26.99 Aligned_cols=22 Identities=9% Similarity=0.126 Sum_probs=14.1
Q ss_pred CCHHHHHHHHhccCcEEEEeCC
Q 021963 278 WDKETVEASVRKTGRLLPRSSG 299 (305)
Q Consensus 278 ~d~~~i~~~~~~~~~vvvvEe~ 299 (305)
+|.+.|.+.+++++.++++++-
T Consensus 161 ~~l~~i~~l~~~~~~~li~D~~ 182 (376)
T 3f0h_A 161 YDTMMIGEFCKKNNMFFVCDCV 182 (376)
T ss_dssp CCHHHHHHHHHHTTCEEEEECT
T ss_pred cCHHHHHHHHHHcCCEEEEEcC
Confidence 4566777777777666655554
No 187
>3le1_A Phosphotransferase system, HPR-related proteins; HPR PTS phosphotransfer, kinase; 1.51A {Thermoanaerobacter tengcongensis} SCOP: d.94.1.0 PDB: 3le3_A 3lnw_A 3lfg_A 3le5_A
Probab=30.43 E-value=61 Score=23.16 Aligned_cols=31 Identities=16% Similarity=0.178 Sum_probs=25.5
Q ss_pred eeeCCcEEEEEeChhHHHHHHHHHHHHhcCC
Q 021963 235 IREGSDITLVGWGAQLSIMEQACLDAEKEGI 265 (305)
Q Consensus 235 ~~~g~dv~Iia~G~~~~~aleAa~~L~~~Gi 265 (305)
++.|..++|.+.|.--..|+++...|-+.|+
T Consensus 55 ~~~G~~i~i~a~G~De~~A~~~l~~l~~~~f 85 (88)
T 3le1_A 55 VSQGNVVKLSAEGDDEEEAIKALVDLIESKF 85 (88)
T ss_dssp CCTTCEEEEEEESTTHHHHHHHHHHHHHTTT
T ss_pred CCCCCEEEEEEeCCCHHHHHHHHHHHHHhcc
Confidence 3578899999999999999999887765543
No 188
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=30.17 E-value=54 Score=26.02 Aligned_cols=32 Identities=13% Similarity=0.118 Sum_probs=24.8
Q ss_pred CCcEEEEEeChhHHHHHHHHHHHHhc-CCCeEEEEe
Q 021963 238 GSDITLVGWGAQLSIMEQACLDAEKE-GISCELIDL 272 (305)
Q Consensus 238 g~dv~Iia~G~~~~~aleAa~~L~~~-Gi~~~vI~~ 272 (305)
+.+++|+++|.+...+ ++.|.+. |.++.++|.
T Consensus 39 ~~~v~IiG~G~~G~~~---a~~L~~~~g~~V~vid~ 71 (183)
T 3c85_A 39 HAQVLILGMGRIGTGA---YDELRARYGKISLGIEI 71 (183)
T ss_dssp TCSEEEECCSHHHHHH---HHHHHHHHCSCEEEEES
T ss_pred CCcEEEECCCHHHHHH---HHHHHhccCCeEEEEEC
Confidence 4579999999876544 4567777 999999985
No 189
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=30.01 E-value=1.1e+02 Score=27.61 Aligned_cols=52 Identities=15% Similarity=0.131 Sum_probs=35.9
Q ss_pred ChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccCcEEEEeCCcc
Q 021963 247 GAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLPRSSGYW 301 (305)
Q Consensus 247 G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvEe~~~ 301 (305)
|.+-..|...++.|++.|++++++++... +.+.+.+.+..++.|++.=.-|.
T Consensus 268 GnT~~la~~i~~~l~~~g~~v~~~~l~~~---~~~~~~~~l~~~D~iiigsP~y~ 319 (414)
T 2q9u_A 268 GTTHRMALALLDGARSTGCETVLLEMTSS---DITKVALHTYDSGAVAFASPTLN 319 (414)
T ss_dssp SHHHHHHHHHHHHHHHTTCEEEEEEGGGC---CHHHHHHHHHTCSEEEEECCCBT
T ss_pred chHHHHHHHHHHHHHhCCCeEEEEEcCcC---CHHHHHHHHHhCCEEEEEcCccC
Confidence 33455566666777778999999997653 45556666778888887755544
No 190
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=29.88 E-value=2.2e+02 Score=22.98 Aligned_cols=48 Identities=13% Similarity=0.067 Sum_probs=33.1
Q ss_pred CcEEEEEeChh-HHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHh
Q 021963 239 SDITLVGWGAQ-LSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR 288 (305)
Q Consensus 239 ~dv~Iia~G~~-~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~ 288 (305)
.++.||.-|.. ...+.+|++.|++-|+..+ +.+-+++-.+++. .++++
T Consensus 4 ~~V~Iimgs~SD~~v~~~a~~~l~~~gi~~e-v~V~SaHR~p~~~-~~~~~ 52 (163)
T 3ors_A 4 MKVAVIMGSSSDWKIMQESCNMLDYFEIPYE-KQVVSAHRTPKMM-VQFAS 52 (163)
T ss_dssp CCEEEEESCGGGHHHHHHHHHHHHHTTCCEE-EEECCTTTSHHHH-HHHHH
T ss_pred CeEEEEECcHHHHHHHHHHHHHHHHcCCCEE-EEEECCcCCHHHH-HHHHH
Confidence 35666665543 7889999999999999866 3566666666554 34443
No 191
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=29.88 E-value=1e+02 Score=26.02 Aligned_cols=34 Identities=18% Similarity=0.272 Sum_probs=26.6
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEec
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~ 273 (305)
+|..++||+.|.+. ...++.|.+.|-++.||+..
T Consensus 30 ~gk~VLVVGgG~va---~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIA---TRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHH---HHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHH---HHHHHHHHHCCCEEEEECCC
Confidence 57889999999654 34556777889999999864
No 192
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=29.49 E-value=62 Score=27.71 Aligned_cols=47 Identities=6% Similarity=-0.004 Sum_probs=27.6
Q ss_pred EEEEEeChhH--HHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhc
Q 021963 241 ITLVGWGAQL--SIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRK 289 (305)
Q Consensus 241 v~Iia~G~~~--~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~ 289 (305)
++|++-|... ..+.++++.|++.|+.+-.|-+.. ..+.+.|++++..
T Consensus 129 iIllTDG~~~d~~~~~~~a~~l~~~gi~i~~iGiG~--~~~~~~L~~iA~~ 177 (266)
T 4hqo_A 129 VILMTDGVPNSKYRALEVANKLKQRNVRLAVIGIGQ--GINHQFNRLIAGC 177 (266)
T ss_dssp EEEEECSCCSCHHHHHHHHHHHHHTTCEEEEEECSS--SCCHHHHHHHHTC
T ss_pred EEEEccCCCCCchHHHHHHHHHHHCCCEEEEEecCc--ccCHHHHHHhhCC
Confidence 4455555432 355667777777777666666554 4566666565543
No 193
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=29.10 E-value=1.6e+02 Score=23.95 Aligned_cols=54 Identities=6% Similarity=-0.028 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHHHhc--CCCeEEEEeccc--cCCCH-------------------------HHHHHHHhccCcEEEEeCC
Q 021963 249 QLSIMEQACLDAEKE--GISCELIDLKTL--IPWDK-------------------------ETVEASVRKTGRLLPRSSG 299 (305)
Q Consensus 249 ~~~~aleAa~~L~~~--Gi~~~vI~~~~i--~P~d~-------------------------~~i~~~~~~~~~vvvvEe~ 299 (305)
+...+..+++.|++. |.+++++|+... .+++. +.+.+.+...+.||+.=.-
T Consensus 18 t~~l~~~~~~~~~~~~~g~~v~~~dL~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~AD~iV~~~P~ 97 (212)
T 3r6w_A 18 SRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPM 97 (212)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEESSSSCCCCCCHHHHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHCSEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEECCCCCCCcCCHHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHhCCEEEEEcCc
Confidence 344555677788877 999999999653 23332 2334556777888877655
Q ss_pred ccc
Q 021963 300 YWR 302 (305)
Q Consensus 300 ~~~ 302 (305)
|+.
T Consensus 98 y~~ 100 (212)
T 3r6w_A 98 YNF 100 (212)
T ss_dssp BTT
T ss_pred ccc
Confidence 543
No 194
>3pu6_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.60A {Wolinella succinogenes}
Probab=28.91 E-value=1.2e+02 Score=23.98 Aligned_cols=55 Identities=11% Similarity=0.045 Sum_probs=37.4
Q ss_pred cEEEEEeChhH----HHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHh--ccCcEEEEeC
Q 021963 240 DITLVGWGAQL----SIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR--KTGRLLPRSS 298 (305)
Q Consensus 240 dv~Iia~G~~~----~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~--~~~~vvvvEe 298 (305)
+++|+++|+.. .....++++|++.=-+++++|..+ -|++. + ..+. +.+++|+|+-
T Consensus 4 ~ilVlGiGN~L~gDDG~G~~v~~~L~~~~p~v~vid~Gt-~~~~l--~-~~l~~~~~d~lIiVDA 64 (157)
T 3pu6_A 4 KKVLLCVGNELRGDDGVAIALGRLVEEQMPEWSVFFGYD-TPESE--F-GKLRELAPDVIVVADA 64 (157)
T ss_dssp CEEEEEECCTTBGGGGHHHHHHHHHHHHCTTEEEEEEET-CGGGG--H-HHHHHHCCSEEEEEEE
T ss_pred CEEEEEECCcccccccHHHHHHHHHHhhCCCeEEEECCC-CHHHH--H-HHHHhcCCCEEEEEEe
Confidence 57899999875 345667777873212799999987 45543 2 3334 4789998874
No 195
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=28.84 E-value=45 Score=31.34 Aligned_cols=34 Identities=18% Similarity=0.228 Sum_probs=26.6
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEec
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~ 273 (305)
.+.+++||+.|.. .+.|+..|.+.|+++.|++-.
T Consensus 121 ~~~~V~IIGgGpA---Gl~aA~~L~~~G~~V~v~e~~ 154 (456)
T 2vdc_G 121 LGLSVGVIGAGPA---GLAAAEELRAKGYEVHVYDRY 154 (456)
T ss_dssp CCCCEEEECCSHH---HHHHHHHHHHHTCCEEEECSS
T ss_pred CCCEEEEECCCHH---HHHHHHHHHHCCCeEEEEecc
Confidence 4568999999974 445666777789999999864
No 196
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=28.68 E-value=1.4e+02 Score=29.47 Aligned_cols=36 Identities=14% Similarity=0.170 Sum_probs=27.4
Q ss_pred HHHccCCCcEEEee---CCHHHHHHHHHHhHh-CCCCEEEe
Q 021963 171 AFFCHVPGLKVVIP---RSPRQAKGLLLSCIR-DPNPVVFF 207 (305)
Q Consensus 171 a~~~~iP~l~V~~P---~d~~e~~~~l~~a~~-~~~Pv~i~ 207 (305)
..++.. |+.++.+ .|..++..+++.+.+ .++|++|.
T Consensus 203 ~~~~a~-G~~~~~~vdG~d~~~l~~al~~a~~~~~~P~lI~ 242 (669)
T 2r8o_A 203 MRFEAY-GWHVIRDIDGHDAASIKRAVEEARAVTDKPSLLM 242 (669)
T ss_dssp HHHHHT-TCEEEEEEETTCHHHHHHHHHHHHHCCSSCEEEE
T ss_pred HHHHHC-CCeEEeEECCCCHHHHHHHHHHHHhcCCCCEEEE
Confidence 455655 7777633 379999999999988 68999884
No 197
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=28.67 E-value=36 Score=30.81 Aligned_cols=36 Identities=14% Similarity=0.100 Sum_probs=28.1
Q ss_pred EeeeCCcEEEEEeChhH-----HHHHHHHHHHHhcCCCeEE
Q 021963 234 VIREGSDITLVGWGAQL-----SIMEQACLDAEKEGISCEL 269 (305)
Q Consensus 234 ~~~~g~dv~Iia~G~~~-----~~aleAa~~L~~~Gi~~~v 269 (305)
.+++|+.|.|||..+.+ .....+.+.|++.|+++.+
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~ 49 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILE 49 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEE
Confidence 46789999999977654 3455678899999998776
No 198
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=28.67 E-value=1.7e+02 Score=23.74 Aligned_cols=48 Identities=25% Similarity=0.174 Sum_probs=32.8
Q ss_pred CcEEEEEeCh-hHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHh
Q 021963 239 SDITLVGWGA-QLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR 288 (305)
Q Consensus 239 ~dv~Iia~G~-~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~ 288 (305)
.++.||.-|. -...+.+|++.|++-|+..+ +.+-+.+-.+++. .++++
T Consensus 7 ~~V~IimgS~SD~~v~~~a~~~l~~~gi~~e-v~V~SaHR~p~~~-~~~~~ 55 (169)
T 3trh_A 7 IFVAILMGSDSDLSTMETAFTELKSLGIPFE-AHILSAHRTPKET-VEFVE 55 (169)
T ss_dssp CEEEEEESCGGGHHHHHHHHHHHHHTTCCEE-EEECCTTTSHHHH-HHHHH
T ss_pred CcEEEEECcHHhHHHHHHHHHHHHHcCCCEE-EEEEcccCCHHHH-HHHHH
Confidence 3566666554 47889999999999999876 5555666666554 34443
No 199
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=28.50 E-value=1.4e+02 Score=26.64 Aligned_cols=68 Identities=12% Similarity=0.039 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEecccCCCcccccchhhHhhhCCC---cEEec---chhHHHHHHHHHHHHhCCC
Q 021963 42 LYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKS---RVFNT---PLCEQGIVGFAIGLAAMGN 110 (305)
Q Consensus 42 ~r~a~~~~L~~l~~~~~~iv~~~~D~~~g~~~~~~~~~~~~~gp~---r~~~~---gIaE~~~v~~AaGlA~~G~ 110 (305)
.-..|.+.+.++.++.++|++++=--+.+|+|......++.| |+ +++|+ +..+..++--|+=++..|.
T Consensus 99 s~~~~~~~fe~l~~~~~~Ii~I~iSS~LSGTy~sA~~Aa~~~-~~~~I~ViDS~~~s~g~g~lv~~Aa~l~~~G~ 172 (315)
T 3fys_A 99 PIGELVALYEELGKSYDAVISIHLSSGISGTFSSAAAADSMV-DNIDVYPFDSEISCLAQGFYALKAAELIKNGA 172 (315)
T ss_dssp CHHHHHHHHHHHTTTCSEEEEEESCTTTCSHHHHHHHGGGGC-SSCEEEEEECSSCHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHhcCCcEEEEeCCCcHhHHHHHHHHHHHhC-CCCCEEEECCchhHHHHHHHHHHHHHHHHcCC
Confidence 346688888999988899998875545556665445556677 66 56774 5566677777888888886
No 200
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=28.06 E-value=44 Score=28.69 Aligned_cols=30 Identities=13% Similarity=0.284 Sum_probs=23.0
Q ss_pred cEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEe
Q 021963 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (305)
Q Consensus 240 dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~ 272 (305)
|++||+.|..- +.||..|.+.|.++.||+-
T Consensus 6 DvvIIG~GpAG---l~AA~~la~~g~~v~liE~ 35 (314)
T 4a5l_A 6 DVVIIGSGPAA---HTAAIYLGRSSLKPVMYEG 35 (314)
T ss_dssp EEEEECCSHHH---HHHHHHHHHTTCCCEEECC
T ss_pred cEEEECCCHHH---HHHHHHHHHCCCCEEEEec
Confidence 89999999743 3455566677999999984
No 201
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=28.01 E-value=61 Score=25.02 Aligned_cols=33 Identities=24% Similarity=0.279 Sum_probs=24.6
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEe
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~ 272 (305)
.+..++|+++|.+.... ++.|.+.|.++.+++.
T Consensus 18 ~~~~v~IiG~G~iG~~l---a~~L~~~g~~V~vid~ 50 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLI---ANLASSSGHSVVVVDK 50 (155)
T ss_dssp CCCEEEEECCSHHHHHH---HHHHHHTTCEEEEEES
T ss_pred CCCcEEEECCCHHHHHH---HHHHHhCCCeEEEEEC
Confidence 35679999998876544 4566677999999875
No 202
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=27.96 E-value=81 Score=27.08 Aligned_cols=56 Identities=9% Similarity=0.014 Sum_probs=35.7
Q ss_pred EEEEEeChhH--HHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhcc-----CcEEEEeC
Q 021963 241 ITLVGWGAQL--SIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKT-----GRLLPRSS 298 (305)
Q Consensus 241 v~Iia~G~~~--~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~-----~~vvvvEe 298 (305)
++|++-|... ....++++.|++.|+.+-.|-+.. ..|.+.|+.++... .+++.+++
T Consensus 132 iillTDG~~~d~~~~~~~~~~l~~~gv~i~~igiG~--~~~~~~L~~iA~~~~~~g~~~~~~~~~ 194 (281)
T 4hqf_A 132 VVILTDGIPDSIQDSLKESRKLSDRGVKIAVFGIGQ--GINVAFNRFLVGCHPSDGKCNLYADSA 194 (281)
T ss_dssp EEEEESSCCSCHHHHHHHHHHHHHTTCEEEEEEESS--SCCHHHHHHHTTSCSSSSCCTTEEEEC
T ss_pred EEEEecCCCCCcHHHHHHHHHHHHCCCEEEEEeCCC--ccCHHHHHhhhCCCCCCCCCceEEecc
Confidence 4555656433 366777888888888777776654 36777776666542 35666654
No 203
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=27.84 E-value=4.3e+02 Score=28.24 Aligned_cols=31 Identities=19% Similarity=0.063 Sum_probs=26.6
Q ss_pred CCCcEEEee-CCHHHHHHHHHHhHhCCCCEEE
Q 021963 176 VPGLKVVIP-RSPRQAKGLLLSCIRDPNPVVF 206 (305)
Q Consensus 176 iP~l~V~~P-~d~~e~~~~l~~a~~~~~Pv~i 206 (305)
++.+....+ .+++|+...+++|+++++|++|
T Consensus 1033 ~~~va~~~v~~~~~~l~~al~eAl~~~GP~lI 1064 (1231)
T 2c42_A 1033 YVYVATVSMGYSKQQFLKVLKEAESFPGPSLV 1064 (1231)
T ss_dssp SSEEEEECTTTCHHHHHHHHHHHHHSSSCEEE
T ss_pred CCEEEEEeccCCHHHHHHHHHHHHhcCCCEEE
Confidence 455556678 5999999999999999999999
No 204
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=27.75 E-value=87 Score=28.00 Aligned_cols=34 Identities=24% Similarity=0.536 Sum_probs=22.6
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCC-CeEEEEec
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGI-SCELIDLK 273 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi-~~~vI~~~ 273 (305)
+|+.++|++.|.+ +..++..|.+.|. ++.|++-.
T Consensus 153 ~gk~~lVlGaGG~---g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGA---ATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHH---HHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChH---HHHHHHHHHHCCCCEEEEEECC
Confidence 3567888888744 4445556777788 67777654
No 205
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=27.73 E-value=27 Score=27.63 Aligned_cols=56 Identities=11% Similarity=0.138 Sum_probs=38.9
Q ss_pred cEEEEEeChhHH----HHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccCcEEEEeC
Q 021963 240 DITLVGWGAQLS----IMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLPRSS 298 (305)
Q Consensus 240 dv~Iia~G~~~~----~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvEe 298 (305)
-+++++=|.... ...++++.+++.|+.+-.|-+. ..|.+.|.+++...++++.+++
T Consensus 109 ~iillTDG~~~~~~~~~~~~~~~~~~~~gi~i~~igvg---~~~~~~L~~iA~~~~~~~~~~~ 168 (185)
T 3n2n_F 109 VIIALTDGELHEDLFFYSEREANRSRDLGAIVYAVGVK---DFNETQLARIADSKDHVFPVND 168 (185)
T ss_dssp EEEEEECCCCCHHHHHHHHHHHHHHHHTTEEEEEEECS---SCCHHHHTTTSSSGGGEEEHHH
T ss_pred EEEEEcCCCCCCCcccchHHHHHHHHHCCCEEEEEEec---cCCHHHHHHHhCCCCCeEEecc
Confidence 356666665432 2367888898889888777775 5688888777766667776654
No 206
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=27.68 E-value=56 Score=27.54 Aligned_cols=31 Identities=19% Similarity=0.193 Sum_probs=24.1
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEe
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~ 272 (305)
.|++||+.|.. .+.++..|.+.|+++.||+-
T Consensus 3 ~~vvIIG~G~a---Gl~aA~~l~~~g~~v~lie~ 33 (297)
T 3fbs_A 3 FDVIIIGGSYA---GLSAALQLGRARKNILLVDA 33 (297)
T ss_dssp EEEEEECCSHH---HHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEECCCHH---HHHHHHHHHhCCCCEEEEeC
Confidence 37899999874 34466678788999999993
No 207
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=27.55 E-value=1.9e+02 Score=26.29 Aligned_cols=61 Identities=8% Similarity=0.126 Sum_probs=40.9
Q ss_pred EEEEeCh-hHHHHHHHHHHHHhcCCCeEEEEeccccCCCH-----HHHHHHHhcc-CcEEEEeCCccc
Q 021963 242 TLVGWGA-QLSIMEQACLDAEKEGISCELIDLKTLIPWDK-----ETVEASVRKT-GRLLPRSSGYWR 302 (305)
Q Consensus 242 ~Iia~G~-~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~-----~~i~~~~~~~-~~vvvvEe~~~~ 302 (305)
+|+++|. +..+.++|++.+.+.|-++.+.+..+-.|-+. ..|..+-+.+ +..|..-+|..+
T Consensus 151 viLstGmat~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg~sdHt~G 218 (349)
T 2wqp_A 151 IILSTGMNSIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTLD 218 (349)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEEEECCSSS
T ss_pred EEEECCCCCHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCEEeCCCCCc
Confidence 6778885 57899999999998888887877666666543 3453333345 445555566543
No 208
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=27.51 E-value=1.2e+02 Score=22.25 Aligned_cols=49 Identities=16% Similarity=0.209 Sum_probs=30.8
Q ss_pred EEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccCc
Q 021963 241 ITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGR 292 (305)
Q Consensus 241 v~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~ 292 (305)
++|+....--....+-.+.+++.|.+++-+.-+. .+ .+.|.++++++..
T Consensus 3 ivivvfstdeetlrkfkdiikkngfkvrtvrspq--el-kdsieelvkkyna 51 (134)
T 2l69_A 3 IVIVVFSTDEETLRKFKDIIKKNGFKVRTVRSPQ--EL-KDSIEELVKKYNA 51 (134)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHTTCEEEEECSHH--HH-HHHHHHHTTCCCC
T ss_pred EEEEEEeCCHHHHHHHHHHHHhcCceEEEecCHH--HH-HHHHHHHHHHhCC
Confidence 4555555555556666677888899887665332 11 3567777887753
No 209
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=27.07 E-value=2e+02 Score=23.08 Aligned_cols=42 Identities=10% Similarity=0.089 Sum_probs=30.1
Q ss_pred cEEEEEeCh-hHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHH
Q 021963 240 DITLVGWGA-QLSIMEQACLDAEKEGISCELIDLKTLIPWDKET 282 (305)
Q Consensus 240 dv~Iia~G~-~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~ 282 (305)
.+.||.-|. -...+.+|++.|++-|+..+ +.+-+++-.+++.
T Consensus 4 ~V~Iimgs~SD~~v~~~a~~~l~~~gi~~e-v~V~saHR~p~~~ 46 (159)
T 3rg8_A 4 LVIILMGSSSDMGHAEKIASELKTFGIEYA-IRIGSAHKTAEHV 46 (159)
T ss_dssp EEEEEESSGGGHHHHHHHHHHHHHTTCEEE-EEECCTTTCHHHH
T ss_pred eEEEEECcHHHHHHHHHHHHHHHHcCCCEE-EEEEcccCCHHHH
Confidence 466666554 47889999999999999766 4556666666543
No 210
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=27.00 E-value=44 Score=31.12 Aligned_cols=31 Identities=19% Similarity=0.260 Sum_probs=24.3
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEe
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~ 272 (305)
++|+||+.|.. .|-||-.|.++|.+|.|+.-
T Consensus 2 k~VvVIGaG~~---GL~aA~~La~~G~~V~VlEa 32 (501)
T 4dgk_A 2 KPTTVIGAGFG---GLALAIRLQAAGIPVLLLEQ 32 (501)
T ss_dssp CCEEEECCHHH---HHHHHHHHHHTTCCEEEECC
T ss_pred CCEEEECCcHH---HHHHHHHHHHCCCcEEEEcc
Confidence 47899998873 45566778889999999864
No 211
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=26.83 E-value=57 Score=28.92 Aligned_cols=57 Identities=14% Similarity=0.112 Sum_probs=34.4
Q ss_pred CcEEEEEeCh--hHHHHHHHHHHHHhcCC-CeEEEEeccccCCCHHHHHHHHhccCcEEE
Q 021963 239 SDITLVGWGA--QLSIMEQACLDAEKEGI-SCELIDLKTLIPWDKETVEASVRKTGRLLP 295 (305)
Q Consensus 239 ~dv~Iia~G~--~~~~aleAa~~L~~~Gi-~~~vI~~~~i~P~d~~~i~~~~~~~~~vvv 295 (305)
.++++|.+-+ .-....+..+.+++.|+ ++++++++.-.-.+.+.+.+.+++.+.|++
T Consensus 57 ~~I~~IptAs~~~~~~~~~~~~~f~~lG~~~v~~L~i~~r~~a~~~~~~~~l~~ad~I~v 116 (291)
T 3en0_A 57 AIIGIIPSASREPLLIGERYQTIFSDMGVKELKVLDIRDRAQGDDSGYRLFVEQCTGIFM 116 (291)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHHHHHHCCSEEEECCCCSGGGGGCHHHHHHHHHCSEEEE
T ss_pred CeEEEEeCCCCChHHHHHHHHHHHHHcCCCeeEEEEecCccccCCHHHHHHHhcCCEEEE
Confidence 5677775433 22233344456666699 789999876542334455577777765554
No 212
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=26.80 E-value=60 Score=30.15 Aligned_cols=33 Identities=18% Similarity=0.277 Sum_probs=25.9
Q ss_pred CCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEec
Q 021963 238 GSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (305)
Q Consensus 238 g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~ 273 (305)
+..++|+++|..... +++.|.+.|+++.+||..
T Consensus 4 ~~~viIiG~Gr~G~~---va~~L~~~g~~vvvId~d 36 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQI---TGRLLLSSGVKMVVLDHD 36 (413)
T ss_dssp CCSEEEECCSHHHHH---HHHHHHHTTCCEEEEECC
T ss_pred CCeEEEECCCHHHHH---HHHHHHHCCCCEEEEECC
Confidence 457999999986654 456788889999999953
No 213
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=26.74 E-value=1.7e+02 Score=25.84 Aligned_cols=24 Identities=8% Similarity=0.012 Sum_probs=16.0
Q ss_pred CCCHHHHHHHHhccCcEEEEeCCc
Q 021963 277 PWDKETVEASVRKTGRLLPRSSGY 300 (305)
Q Consensus 277 P~d~~~i~~~~~~~~~vvvvEe~~ 300 (305)
..|.+.|.+.+++++.++++++-+
T Consensus 152 ~~~l~~i~~l~~~~~~~li~D~a~ 175 (416)
T 3isl_A 152 IHPLKAIGEACRTEDALFIVDAVA 175 (416)
T ss_dssp ECCCHHHHHHHHHTTCEEEEECTT
T ss_pred ecCHHHHHHHHHHcCCEEEEECCc
Confidence 345677878888877666666543
No 214
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=26.73 E-value=1.7e+02 Score=25.40 Aligned_cols=20 Identities=15% Similarity=-0.031 Sum_probs=9.7
Q ss_pred HHHHHHHHhccCcEEEEeCC
Q 021963 280 KETVEASVRKTGRLLPRSSG 299 (305)
Q Consensus 280 ~~~i~~~~~~~~~vvvvEe~ 299 (305)
.+.|.+.+++++.++++++-
T Consensus 167 l~~i~~l~~~~~~~li~De~ 186 (393)
T 3kgw_A 167 LDGFGELCHRYQCLLLVDSV 186 (393)
T ss_dssp CTTHHHHHHHTTCEEEEECT
T ss_pred HHHHHHHHHHcCCEEEEECC
Confidence 33455555555544444443
No 215
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=26.45 E-value=41 Score=30.98 Aligned_cols=37 Identities=11% Similarity=0.021 Sum_probs=27.8
Q ss_pred EeeeCCcEEEEEeChhH-----HHHHHHHHHHHhcCCCeEEE
Q 021963 234 VIREGSDITLVGWGAQL-----SIMEQACLDAEKEGISCELI 270 (305)
Q Consensus 234 ~~~~g~dv~Iia~G~~~-----~~aleAa~~L~~~Gi~~~vI 270 (305)
.+++|+.|.|||..+.+ .....+.+.|++.|+++.+-
T Consensus 39 ~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~ 80 (371)
T 3tla_A 39 PLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSG 80 (371)
T ss_dssp CCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEC
Confidence 46789999999987644 34556778999889987654
No 216
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=26.33 E-value=49 Score=28.57 Aligned_cols=31 Identities=19% Similarity=0.282 Sum_probs=24.8
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEe
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~ 272 (305)
.|++||+.|.. .+.++..|.+.|+++.||+-
T Consensus 23 ~~vvIIG~G~a---Gl~aA~~l~~~g~~v~vie~ 53 (338)
T 3itj_A 23 NKVTIIGSGPA---AHTAAIYLARAEIKPILYEG 53 (338)
T ss_dssp EEEEEECCSHH---HHHHHHHHHHTTCCCEEECC
T ss_pred CCEEEECcCHH---HHHHHHHHHHCCCCEEEEec
Confidence 58999999974 34456667778999999997
No 217
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=26.27 E-value=99 Score=28.12 Aligned_cols=51 Identities=18% Similarity=0.201 Sum_probs=34.9
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEecc-ccC--CCHHH---HHHHHhcc
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKT-LIP--WDKET---VEASVRKT 290 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~-i~P--~d~~~---i~~~~~~~ 290 (305)
.+++++||+.|.. ++|.+..|.+.|.++.++.... +-| +|.+. +.+.+++.
T Consensus 144 ~~~~vvViGgG~~---g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~ 200 (408)
T 2gqw_A 144 PQSRLLIVGGGVI---GLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQ 200 (408)
T ss_dssp TTCEEEEECCSHH---HHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHT
T ss_pred cCCeEEEECCCHH---HHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHc
Confidence 3678999988864 6677778888899999998753 333 56543 44444443
No 218
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=26.22 E-value=44 Score=30.05 Aligned_cols=36 Identities=14% Similarity=0.293 Sum_probs=26.5
Q ss_pred EeeeCCcEEEEEeChhH-----HHHHHHHHHHHhcCCCeEE
Q 021963 234 VIREGSDITLVGWGAQL-----SIMEQACLDAEKEGISCEL 269 (305)
Q Consensus 234 ~~~~g~dv~Iia~G~~~-----~~aleAa~~L~~~Gi~~~v 269 (305)
.+++|+.|.|||..+.+ .....+.+.|++.|+++.+
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~ 48 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTF 48 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEE
Confidence 36789999999876432 3455677889988988754
No 219
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=26.13 E-value=66 Score=26.67 Aligned_cols=32 Identities=16% Similarity=0.274 Sum_probs=25.3
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEec
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~ 273 (305)
.|++||+-|.. .++++..|.+.|.++.||+-.
T Consensus 4 ~dVvVVGgG~a---Gl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 4 YQVLIVGAGFS---GAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp CSEEEECCSHH---HHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEECcCHH---HHHHHHHHHHCCCCEEEEecC
Confidence 48999999874 455666777789999999875
No 220
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=25.87 E-value=62 Score=27.58 Aligned_cols=32 Identities=22% Similarity=0.239 Sum_probs=24.5
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEec
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~ 273 (305)
.|++||+.|..- +.++..|.+.|.++.||+-.
T Consensus 16 ~~vvIIG~G~aG---l~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 16 FDVIIVGLGPAA---YGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp EEEEEECCSHHH---HHHHHHHHHTTCCEEEEESS
T ss_pred cCEEEECccHHH---HHHHHHHHHCCCcEEEEecc
Confidence 489999999843 34555677779999999963
No 221
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=25.62 E-value=54 Score=27.26 Aligned_cols=31 Identities=10% Similarity=0.268 Sum_probs=21.6
Q ss_pred CCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEe
Q 021963 238 GSDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (305)
Q Consensus 238 g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~ 272 (305)
...++|+++|... ...++.|.++|+ +.+|+.
T Consensus 9 ~~~viI~G~G~~G---~~la~~L~~~g~-v~vid~ 39 (234)
T 2aef_A 9 SRHVVICGWSEST---LECLRELRGSEV-FVLAED 39 (234)
T ss_dssp -CEEEEESCCHHH---HHHHHHSTTSEE-EEEESC
T ss_pred CCEEEEECCChHH---HHHHHHHHhCCe-EEEEEC
Confidence 4578899888654 345667777788 888874
No 222
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=25.50 E-value=71 Score=24.94 Aligned_cols=46 Identities=15% Similarity=0.243 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccCcEEEEeCC
Q 021963 251 SIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLPRSSG 299 (305)
Q Consensus 251 ~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvEe~ 299 (305)
....++++.+++.|+.+-.|-+. ..+.+.+.+++..++.++.+.++
T Consensus 121 ~~~~~~~~~~~~~~i~i~~igvg---~~~~~~L~~ia~~~~~~~~~~~~ 166 (182)
T 1shu_X 121 SYAEKEAKISRSLGASVYCVGVL---DFEQAQLERIADSKEQVFPVKGG 166 (182)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECS---SCCHHHHHHHSSSGGGEEESSST
T ss_pred hhHHHHHHHHHhCCCEEEEEeCC---cCCHHHHHHHhCCCCceEEccCC
Confidence 34456777888889888888776 56888888887777777766533
No 223
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=25.44 E-value=92 Score=27.93 Aligned_cols=50 Identities=16% Similarity=0.271 Sum_probs=35.0
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEec-cccCCCHHH---HHHHHhc
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK-TLIPWDKET---VEASVRK 289 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~-~i~P~d~~~---i~~~~~~ 289 (305)
.+++++||+.|. .++|.+..|.+.|.++.++... .+-|+|.+. +.+.+++
T Consensus 142 ~~~~vvViGgG~---~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~l~~~l~~ 195 (367)
T 1xhc_A 142 NSGEAIIIGGGF---IGLELAGNLAEAGYHVKLIHRGAMFLGLDEELSNMIKDMLEE 195 (367)
T ss_dssp HHSEEEEEECSH---HHHHHHHHHHHTTCEEEEECSSSCCTTCCHHHHHHHHHHHHH
T ss_pred cCCcEEEECCCH---HHHHHHHHHHhCCCEEEEEeCCCeeccCCHHHHHHHHHHHHH
Confidence 357899999886 4667777888889999999864 444577643 4444444
No 224
>1vk8_A Hypothetical protein TM0486; protein with possible role in cell WALL biogenesis, structur genomics, joint center for structural genomics; HET: UNL; 1.80A {Thermotoga maritima} SCOP: d.58.48.1
Probab=25.34 E-value=1e+02 Score=23.10 Aligned_cols=51 Identities=16% Similarity=0.122 Sum_probs=36.0
Q ss_pred cEEEEEeC---hhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhcc
Q 021963 240 DITLVGWG---AQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKT 290 (305)
Q Consensus 240 dv~Iia~G---~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~ 290 (305)
++.|+-.| +....+-+|.+.|++.|++..+=-+.|.--=|++.+.+.+++.
T Consensus 19 ~~sv~Plg~~~svs~~Va~~i~vi~~sGL~y~~~pmgT~IEGe~devm~vvk~~ 72 (106)
T 1vk8_A 19 SIKVVPAVEDGRLHEVIDRAIEKISSWGMKYEVGPSNTTVEGEFEEIMDRVKEL 72 (106)
T ss_dssp EEEEEESSCGGGHHHHHHHHHHHHHTTCSCEEECSSCEEEEECHHHHHHHHHHH
T ss_pred EEEEEeCCCCCchHHHHHHHHHHHHHcCCCeEeCCCccEEEcCHHHHHHHHHHH
Confidence 56666666 4556677788888889999988777777555666666666543
No 225
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=25.31 E-value=45 Score=25.87 Aligned_cols=35 Identities=14% Similarity=0.159 Sum_probs=21.6
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEE
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELID 271 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~ 271 (305)
+++.+++.|.+.....+..|+..|++.|+++.+++
T Consensus 71 ~~~~ivvyC~~g~~~rs~~aa~~L~~~G~~v~~l~ 105 (144)
T 3nhv_A 71 KEKVIITYCWGPACNGATKAAAKFAQLGFRVKELI 105 (144)
T ss_dssp TTSEEEEECSCTTCCHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCeEEEEECCCCccHHHHHHHHHHHCCCeEEEeC
Confidence 34455555544321356678888999999755554
No 226
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=25.30 E-value=55 Score=23.30 Aligned_cols=30 Identities=10% Similarity=0.126 Sum_probs=19.3
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeE
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCE 268 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~ 268 (305)
+++.+++.|.+. ..+..|+..|++.|+++.
T Consensus 55 ~~~~ivvyC~~g--~rs~~a~~~L~~~G~~v~ 84 (100)
T 3foj_A 55 DNETYYIICKAG--GRSAQVVQYLEQNGVNAV 84 (100)
T ss_dssp TTSEEEEECSSS--HHHHHHHHHHHTTTCEEE
T ss_pred CCCcEEEEcCCC--chHHHHHHHHHHCCCCEE
Confidence 344555555332 457788899999998443
No 227
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=25.24 E-value=43 Score=30.18 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=25.9
Q ss_pred eeCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccc
Q 021963 236 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTL 275 (305)
Q Consensus 236 ~~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i 275 (305)
..|+|++||+.|.. .+.|+..|++.| ++.||+-...
T Consensus 6 ~~~~~vvIIGgG~A---Gl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 6 HHGSKVVIVGNGPG---GFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp ---CEEEEECCSHH---HHHHHHHHTTTS-EEEEECSSSS
T ss_pred cCCCcEEEECCcHH---HHHHHHHHhhcC-CEEEEECCCC
Confidence 35899999999974 445666777789 9999987653
No 228
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=25.05 E-value=1.5e+02 Score=23.88 Aligned_cols=37 Identities=14% Similarity=0.204 Sum_probs=30.4
Q ss_pred CCCeEEEEeccccCCCHHHHHHHHhccCcEEEEeCCccc
Q 021963 264 GISCELIDLKTLIPWDKETVEASVRKTGRLLPRSSGYWR 302 (305)
Q Consensus 264 Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvEe~~~~ 302 (305)
.-+++++|+.. +.|.+...+.+...+.||+.=.-|+.
T Consensus 28 ~~~v~v~dL~~--~~D~~~~~~~l~~aD~iV~~~P~y~~ 64 (177)
T 3ha2_A 28 FSNVTWHPLVA--DFNVEQEQSLLLQNDRIILEFPLYWY 64 (177)
T ss_dssp CTTEEEEECCT--TCCHHHHHHHHHTCSEEEEEEECBTT
T ss_pred CCCEEEEECCC--cccHHHHHHHHHhCCEEEEECChhhc
Confidence 35799999998 88998888999999999987665553
No 229
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=24.97 E-value=1.6e+02 Score=26.26 Aligned_cols=54 Identities=22% Similarity=0.298 Sum_probs=34.2
Q ss_pred cEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEecccc-------------CCCHHHHHHHHhccCcEEEEe
Q 021963 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLI-------------PWDKETVEASVRKTGRLLPRS 297 (305)
Q Consensus 240 dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~-------------P~d~~~i~~~~~~~~~vvvvE 297 (305)
++.|++.|.. +.+.++.|++.|+++-++|...-. ..|.+.+.+.+.+.+ +|+.+
T Consensus 3 ~Ililg~g~~---g~~~~~a~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~d-~v~~~ 69 (380)
T 3ax6_A 3 KIGIIGGGQL---GKMMTLEAKKMGFYVIVLDPTPRSPAGQVADEQIVAGFFDSERIEDLVKGSD-VTTYD 69 (380)
T ss_dssp EEEEECCSHH---HHHHHHHHHHTTCEEEEEESSTTCTTGGGSSEEEECCTTCHHHHHHHHHTCS-EEEES
T ss_pred EEEEECCCHH---HHHHHHHHHHCCCEEEEEeCCCCCchhhhCceEEECCCCCHHHHHHHHhcCC-EEEec
Confidence 5788888854 444555566779999888873222 235677777775554 44443
No 230
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=24.92 E-value=39 Score=28.31 Aligned_cols=42 Identities=10% Similarity=-0.047 Sum_probs=32.1
Q ss_pred eCCcEEEEEeChhH-H-HHHHHHHHHHhcCCCeEEEEe----ccccCC
Q 021963 237 EGSDITLVGWGAQL-S-IMEQACLDAEKEGISCELIDL----KTLIPW 278 (305)
Q Consensus 237 ~g~dv~Iia~G~~~-~-~aleAa~~L~~~Gi~~~vI~~----~~i~P~ 278 (305)
+++++++--+|+.. . .+.+.++.|.+.|.++.||=- .++.|+
T Consensus 6 ~~k~I~lgiTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i~~~ 53 (201)
T 3lqk_A 6 AGKHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQTTDTKF 53 (201)
T ss_dssp TTCEEEEECCSCGGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTTCCT
T ss_pred CCCEEEEEEEChHHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHHHHh
Confidence 45678888888764 4 588999999999999998843 455666
No 231
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=24.84 E-value=1.8e+02 Score=26.80 Aligned_cols=62 Identities=11% Similarity=0.037 Sum_probs=42.2
Q ss_pred EEEEEeCh-hHHHHHHHHHHHHhcCC-CeEEEEeccccCCCHH-----HHHHHHhcc-CcEEEEeCCccc
Q 021963 241 ITLVGWGA-QLSIMEQACLDAEKEGI-SCELIDLKTLIPWDKE-----TVEASVRKT-GRLLPRSSGYWR 302 (305)
Q Consensus 241 v~Iia~G~-~~~~aleAa~~L~~~Gi-~~~vI~~~~i~P~d~~-----~i~~~~~~~-~~vvvvEe~~~~ 302 (305)
=+|+++|. +..+..+|++.+.+.|. ++.+..+.+-.|-+.+ .|..+-+.+ +..|..-+|..+
T Consensus 160 PViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpVG~SdHt~G 229 (385)
T 1vli_A 160 PMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVIGFSDHSEH 229 (385)
T ss_dssp CEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEEEEEECCSS
T ss_pred eEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCEEeCCCCCC
Confidence 36788885 57899999999998887 8888887777776444 343333345 445555566544
No 232
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=24.82 E-value=1.8e+02 Score=25.78 Aligned_cols=54 Identities=17% Similarity=0.249 Sum_probs=36.7
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCC---C----HHHHHHHHhccCcEE
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPW---D----KETVEASVRKTGRLL 294 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~---d----~~~i~~~~~~~~~vv 294 (305)
.|+.+.||++|.+-... ++.|+..|.++-++|... ++. + ...+.+.+++.+-|+
T Consensus 138 ~g~tvGIiG~G~IG~~v---A~~l~~~G~~V~~~dr~~-~~~~~~~~~~~~~~l~ell~~aDiV~ 198 (315)
T 3pp8_A 138 EEFSVGIMGAGVLGAKV---AESLQAWGFPLRCWSRSR-KSWPGVESYVGREELRAFLNQTRVLI 198 (315)
T ss_dssp TTCCEEEECCSHHHHHH---HHHHHTTTCCEEEEESSC-CCCTTCEEEESHHHHHHHHHTCSEEE
T ss_pred CCCEEEEEeeCHHHHHH---HHHHHHCCCEEEEEcCCc-hhhhhhhhhcccCCHHHHHhhCCEEE
Confidence 47789999999987654 456667799998887432 222 1 146777777766444
No 233
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=24.79 E-value=33 Score=25.79 Aligned_cols=32 Identities=13% Similarity=0.157 Sum_probs=19.9
Q ss_pred CCcEEEEEeChhHHHHHHHHHHHHhcCCCeEE
Q 021963 238 GSDITLVGWGAQLSIMEQACLDAEKEGISCEL 269 (305)
Q Consensus 238 g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~v 269 (305)
++.++++|.+..-..+..|+..|++.|+++.+
T Consensus 71 ~~~ivvyC~~g~r~~s~~a~~~L~~~G~~v~~ 102 (124)
T 3flh_A 71 AKTYVVYDWTGGTTLGKTALLVLLSAGFEAYE 102 (124)
T ss_dssp TSEEEEECSSSSCSHHHHHHHHHHHHTCEEEE
T ss_pred CCeEEEEeCCCCchHHHHHHHHHHHcCCeEEE
Confidence 44566665544333366788889888996333
No 234
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=24.76 E-value=1.1e+02 Score=25.91 Aligned_cols=47 Identities=13% Similarity=0.130 Sum_probs=33.1
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHH
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEAS 286 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~ 286 (305)
.+++++||+.|. .+++.+..|.+.|.++.++....-.+++.+....+
T Consensus 142 ~~~~v~VvG~G~---~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~l 188 (311)
T 2q0l_A 142 KNKEVAVLGGGD---TAVEEAIYLANICKKVYLIHRRDGFRCAPITLEHA 188 (311)
T ss_dssp TTSEEEEECCSH---HHHHHHHHHHTTSSEEEEECSSSSCCSCHHHHHHH
T ss_pred CCCEEEEECCCH---HHHHHHHHHHhcCCEEEEEeeCCccCCCHHHHHHH
Confidence 357889998886 45566777888899999998765445665554443
No 235
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=24.13 E-value=2.9e+02 Score=22.49 Aligned_cols=43 Identities=9% Similarity=0.083 Sum_probs=30.0
Q ss_pred CcEEEEEeChh-HHHHHHHHHHHHhcCCCeEEEEeccccCCCHHH
Q 021963 239 SDITLVGWGAQ-LSIMEQACLDAEKEGISCELIDLKTLIPWDKET 282 (305)
Q Consensus 239 ~dv~Iia~G~~-~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~ 282 (305)
.++.||.-|.. ...+.+|++.|++-|+..+ +.+-+++-.+++.
T Consensus 8 ~~V~IimgS~SD~~v~~~a~~~L~~~gi~~e-v~V~SaHR~p~~~ 51 (174)
T 3lp6_A 8 PRVGVIMGSDSDWPVMADAAAALAEFDIPAE-VRVVSAHRTPEAM 51 (174)
T ss_dssp CSEEEEESCGGGHHHHHHHHHHHHHTTCCEE-EEECCTTTCHHHH
T ss_pred CeEEEEECcHHhHHHHHHHHHHHHHcCCCEE-EEEECCCCCHHHH
Confidence 35777765544 7889999999999999765 4455556566543
No 236
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=24.10 E-value=1e+02 Score=24.83 Aligned_cols=56 Identities=7% Similarity=-0.004 Sum_probs=34.9
Q ss_pred EEEEEeChhH----HHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhc--cCcEEEEeC
Q 021963 241 ITLVGWGAQL----SIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRK--TGRLLPRSS 298 (305)
Q Consensus 241 v~Iia~G~~~----~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~--~~~vvvvEe 298 (305)
++|++-|... ....++++.|++.|+.+-.|-+.. ..|.+.|.+++.. .++++.+++
T Consensus 119 iillTDG~~~~~~~~~~~~~a~~l~~~gi~i~~igvG~--~~~~~~L~~iA~~~~~~~~~~~~~ 180 (202)
T 1ijb_A 119 ALLLMASQEPQRMSRNFVRYVQGLKKKKVIVIPVGIGP--HANLKQIRLIEKQAPENKAFVLSS 180 (202)
T ss_dssp EEEEECCCCCGGGCTTHHHHHHHHHHTTEEEEEEEEST--TSCHHHHHHHHHHCTTCCCEEESS
T ss_pred EEEEccCCCCccchHHHHHHHHHHHHCCCEEEEEecCC--cCCHHHHHHHhCCCCcccEEEeCC
Confidence 4455555432 245667778888887776666653 4688888777653 256666653
No 237
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=24.10 E-value=1.2e+02 Score=25.71 Aligned_cols=50 Identities=16% Similarity=0.143 Sum_probs=36.3
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhc
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRK 289 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~ 289 (305)
.++.++||+.|. .+++.+..|.+.|.++.++....-.+.+.+.+.+.+++
T Consensus 146 ~~~~v~viG~g~---~~~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 195 (315)
T 3r9u_A 146 KNKEVAVLGGGD---TALEEALYLANICSKIYLIHRRDEFRAAPSTVEKVKKN 195 (315)
T ss_dssp TTSEEEEECCBH---HHHHHHHHHHTTSSEEEEECSSSSCBSCHHHHHHHHHC
T ss_pred CcCEEEEECCCH---HHHHHHHHHHhhCCEEEEEEeCCCCCCCHHHHHHHHhc
Confidence 467889998776 45667777888899999998776556666666665543
No 238
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=24.01 E-value=57 Score=29.54 Aligned_cols=30 Identities=27% Similarity=0.243 Sum_probs=23.7
Q ss_pred cEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEe
Q 021963 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (305)
Q Consensus 240 dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~ 272 (305)
|++||+.|..- +.||..|.+.|.+|.||+-
T Consensus 3 dVvVIGaG~aG---l~aA~~L~~~G~~V~vlE~ 32 (431)
T 3k7m_X 3 DAIVVGGGFSG---LKAARDLTNAGKKVLLLEG 32 (431)
T ss_dssp EEEEECCBHHH---HHHHHHHHHTTCCEEEECS
T ss_pred CEEEECCcHHH---HHHHHHHHHcCCeEEEEec
Confidence 79999999743 3456678788999999975
No 239
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=24.00 E-value=59 Score=31.23 Aligned_cols=26 Identities=8% Similarity=-0.042 Sum_probs=21.1
Q ss_pred EEeeCCHHHHHHHHH-HhHhCC-CCEEE
Q 021963 181 VVIPRSPRQAKGLLL-SCIRDP-NPVVF 206 (305)
Q Consensus 181 V~~P~d~~e~~~~l~-~a~~~~-~Pv~i 206 (305)
.+.-.+.+|+...++ .+++.+ +|++|
T Consensus 509 ~~~v~~~~el~~al~~~a~~~~~~p~li 536 (563)
T 2vk8_A 509 THRVATTGEWDKLTQDKSFNDNSKIRMI 536 (563)
T ss_dssp EEEECBHHHHHHHHTCTTTTSCSSEEEE
T ss_pred EEEecCHHHHHHHHHHHHHhCCCCcEEE
Confidence 666778999999999 788754 68888
No 240
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=23.85 E-value=47 Score=27.25 Aligned_cols=53 Identities=9% Similarity=0.198 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHhcCCCeE-EEEeccccCCCH------------HHHHHHHhccCcEEEEeCCccc
Q 021963 250 LSIMEQACLDAEKEGISCE-LIDLKTLIPWDK------------ETVEASVRKTGRLLPRSSGYWR 302 (305)
Q Consensus 250 ~~~aleAa~~L~~~Gi~~~-vI~~~~i~P~d~------------~~i~~~~~~~~~vvvvEe~~~~ 302 (305)
.....+++..+.++|++++ ++|+.-+-.++. +.+.+.++..+.+|++-.-|.+
T Consensus 20 t~~l~~~~~~~~~~g~~v~~~idL~~lP~~~~~~~~~~~~~~~~~~l~~~i~~AD~iv~~sP~y~~ 85 (193)
T 3svl_A 20 NGMVARTLPKIAPASMEVNALPSIADIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEYNY 85 (193)
T ss_dssp HHHHHHHGGGTSCTTEEEEECCCSTTCCCCCHHHHHHTCSCHHHHHHHHHHHHSSEEEEEECCBTT
T ss_pred HHHHHHHHHHHccCCCEEEEEEeHHHCCCCCcccccccCCCHHHHHHHHHHHHCCEEEEEecccCC
Confidence 3344444443445688899 889887522322 2356777888888887766654
No 241
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=23.65 E-value=79 Score=28.64 Aligned_cols=37 Identities=16% Similarity=0.269 Sum_probs=27.0
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCC--CeEEEEeccccCC
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGI--SCELIDLKTLIPW 278 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi--~~~vI~~~~i~P~ 278 (305)
++++||+.|.. .+.|+..|++.|. ++.||+-..-.|+
T Consensus 2 k~vvIIGaG~a---Gl~aA~~L~~~g~~~~V~lie~~~~~~y 40 (404)
T 3fg2_P 2 DTVLIAGAGHA---GFQVAVSLRQAKYPGRIALINDEKHLPY 40 (404)
T ss_dssp CCEEEECCSHH---HHHHHHHHHHTTCCSCEEEECCSSSSSB
T ss_pred CCEEEEcChHH---HHHHHHHHHhhCcCCCEEEEeCCCCCCC
Confidence 57999999874 3456677888888 8999987654343
No 242
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=23.42 E-value=74 Score=27.37 Aligned_cols=31 Identities=23% Similarity=0.190 Sum_probs=22.7
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEe
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~ 272 (305)
-|++||+.|..- +.||-.|.+.|.++.||+-
T Consensus 7 yDVvIIGaGpAG---lsAA~~lar~g~~v~lie~ 37 (304)
T 4fk1_A 7 IDCAVIGAGPAG---LNASLVLGRARKQIALFDN 37 (304)
T ss_dssp EEEEEECCSHHH---HHHHHHHHHTTCCEEEEEC
T ss_pred cCEEEECCCHHH---HHHHHHHHHCCCCEEEEeC
Confidence 389999999753 2344455567999999984
No 243
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=23.39 E-value=1e+02 Score=26.99 Aligned_cols=49 Identities=16% Similarity=0.287 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHH---Hhc----cCcEEEEeCC
Q 021963 250 LSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEAS---VRK----TGRLLPRSSG 299 (305)
Q Consensus 250 ~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~---~~~----~~~vvvvEe~ 299 (305)
-..+.+.++.++++||.+.||.+-.-. .+.+.+.++ +.. ..++|+|-.+
T Consensus 122 ~~~l~~lak~lkk~gI~v~vIgFG~~~-~n~~kLe~l~~~~Ng~~~~~s~~v~v~~g 177 (268)
T 4b4t_W 122 RDELIRLAKTLKKNNVAVDIINFGEIE-QNTELLDEFIAAVNNPQEETSHLLTVTPG 177 (268)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEESSCC-SSCCHHHHHHHHHCSSTTTSCEEEEECCC
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeCCCc-cchHHHHHHHHHhcCCCCCceeEEEeCCC
Confidence 467788889999999999999998743 344444443 432 2478888765
No 244
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=23.38 E-value=1.7e+02 Score=24.77 Aligned_cols=49 Identities=16% Similarity=0.285 Sum_probs=33.7
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhc
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRK 289 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~ 289 (305)
.+++++||+.|.. +.|.+..|.+.|.++.++....-.+++.. +.+.+++
T Consensus 143 ~~~~v~VvG~G~~---g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~-~~~~l~~ 191 (310)
T 1fl2_A 143 KGKRVAVIGGGNS---GVEAAIDLAGIVEHVTLLEFAPEMKADQV-LQDKLRS 191 (310)
T ss_dssp BTCEEEEECCSHH---HHHHHHHHHTTBSEEEEECSSSSCCSCHH-HHHHHHT
T ss_pred CCCEEEEECCCHH---HHHHHHHHHHhCCEEEEEEeCcccCccHH-HHHHHhh
Confidence 4678999988864 45666778888999999987654456644 3344443
No 245
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=23.33 E-value=65 Score=28.10 Aligned_cols=32 Identities=13% Similarity=0.068 Sum_probs=24.0
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEec
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~ 273 (305)
.|++||+.|..-. .+|-.|.+.|.+|.||+-.
T Consensus 5 ~dvvIIG~G~~Gl---~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 5 IDCIVIGAGVVGL---AIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp EEEEEECCSHHHH---HHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECCCHHHH---HHHHHHHhCCCeEEEEeCC
Confidence 4899999998532 2344566679999999976
No 246
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=23.31 E-value=41 Score=29.20 Aligned_cols=29 Identities=21% Similarity=0.133 Sum_probs=15.2
Q ss_pred CcEEEe--eCCHHHHHHHHHHhHhCCCCEEE
Q 021963 178 GLKVVI--PRSPRQAKGLLLSCIRDPNPVVF 206 (305)
Q Consensus 178 ~l~V~~--P~d~~e~~~~l~~a~~~~~Pv~i 206 (305)
+-.++. |.+.++....+.........|.+
T Consensus 51 ~~~~~~~~~~~~~~~~~~i~~~~~~G~~Va~ 81 (264)
T 3ndc_A 51 GAKIVNTAPMSLDAIIDTIAEAHAAGQDVAR 81 (264)
T ss_dssp TCEEEECTTSCHHHHHHHHHHHHHHTCCEEE
T ss_pred CCEEEecCCCCHHHHHHHHHHHHHCCCeEEE
Confidence 444443 55667766666555544344444
No 247
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=23.06 E-value=85 Score=26.38 Aligned_cols=34 Identities=18% Similarity=-0.062 Sum_probs=27.5
Q ss_pred CcEEEEEeCh-hHHHHHHHHHHHHhcCCCeEEEEe
Q 021963 239 SDITLVGWGA-QLSIMEQACLDAEKEGISCELIDL 272 (305)
Q Consensus 239 ~dv~Iia~G~-~~~~aleAa~~L~~~Gi~~~vI~~ 272 (305)
++++|.-+|+ ....+.+.++.|.+.|.++.||=-
T Consensus 5 k~IllgvTGaiaa~k~~~ll~~L~~~g~eV~vv~T 39 (209)
T 3zqu_A 5 ERITLAMTGASGAQYGLRLLDCLVQEEREVHFLIS 39 (209)
T ss_dssp SEEEEEECSSSCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC
Confidence 5677777786 468899999999999999988743
No 248
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=23.03 E-value=48 Score=29.95 Aligned_cols=36 Identities=14% Similarity=0.232 Sum_probs=27.3
Q ss_pred EeeeCCcEEEEEeChhH-----HHHHHHHHHHHhcCCCeEE
Q 021963 234 VIREGSDITLVGWGAQL-----SIMEQACLDAEKEGISCEL 269 (305)
Q Consensus 234 ~~~~g~dv~Iia~G~~~-----~~aleAa~~L~~~Gi~~~v 269 (305)
.+++|+.|.|||..+.+ .....+.+.|++.|+++.+
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~ 48 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTF 48 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEE
Confidence 36788999999876653 3555678899988998765
No 249
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=23.02 E-value=70 Score=28.25 Aligned_cols=50 Identities=10% Similarity=0.131 Sum_probs=31.7
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccCcEE
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLL 294 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vv 294 (305)
+|++++||+.|.++... ++..|...|..+.+.+-++ +.+.+.++..+-||
T Consensus 149 ~Gk~vvVvG~s~iVG~p--lA~lL~~~gAtVtv~~~~t------~~L~~~~~~ADIVI 198 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRP--LSMMLLNRNYTVSVCHSKT------KDIGSMTRSSKIVV 198 (276)
T ss_dssp CSCEEEEECCCTTTHHH--HHHHHHHTTCEEEEECTTC------SCHHHHHHHSSEEE
T ss_pred CCCEEEEEcCChHHHHH--HHHHHHHCCCeEEEEeCCc------ccHHHhhccCCEEE
Confidence 56788999988766544 3445666788888877544 23445555555443
No 250
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=22.91 E-value=1.5e+02 Score=22.67 Aligned_cols=57 Identities=12% Similarity=0.046 Sum_probs=40.1
Q ss_pred CCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccCcEEEEeCCcc
Q 021963 238 GSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLPRSSGYW 301 (305)
Q Consensus 238 g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvEe~~~ 301 (305)
..|+++++.-. ..+.++++++.+.|++.-+++..+. .+.+.+.+++.+ +-+++.|-.
T Consensus 69 ~vDlvii~vp~--~~v~~v~~~~~~~g~~~i~~~~~~~----~~~l~~~a~~~G-i~~igpnc~ 125 (138)
T 1y81_A 69 DVDVIVFVVPP--KVGLQVAKEAVEAGFKKLWFQPGAE----SEEIRRFLEKAG-VEYSFGRCI 125 (138)
T ss_dssp TCCEEEECSCH--HHHHHHHHHHHHTTCCEEEECTTSC----CHHHHHHHHHHT-CEEECSCCH
T ss_pred CCCEEEEEeCH--HHHHHHHHHHHHcCCCEEEEcCccH----HHHHHHHHHHCC-CEEEcCCcc
Confidence 46899998873 6777778777778999888877663 355667677665 445666643
No 251
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=22.88 E-value=68 Score=27.52 Aligned_cols=32 Identities=22% Similarity=0.212 Sum_probs=24.9
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEec
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~ 273 (305)
.|++||+.|.. .+.++..|.+.|+++.||+-.
T Consensus 8 ~~vvIIG~G~a---Gl~aA~~l~~~g~~v~lie~~ 39 (332)
T 3lzw_A 8 YDITIIGGGPV---GLFTAFYGGMRQASVKIIESL 39 (332)
T ss_dssp EEEEEECCSHH---HHHHHHHHHHTTCCEEEECSS
T ss_pred ceEEEECCCHH---HHHHHHHHHHCCCCEEEEEcC
Confidence 48999999974 344566677789999999974
No 252
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=22.87 E-value=1.2e+02 Score=21.71 Aligned_cols=38 Identities=13% Similarity=0.135 Sum_probs=30.3
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccC
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIP 277 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P 277 (305)
.+++|++. +....|.+|.+.|++.|++...+|+....|
T Consensus 19 ~~v~vy~~-~~Cp~C~~~~~~L~~~~i~~~~~di~~~~~ 56 (113)
T 3rhb_A 19 NTVVIYSK-TWCSYCTEVKTLFKRLGVQPLVVELDQLGP 56 (113)
T ss_dssp SSEEEEEC-TTCHHHHHHHHHHHHTTCCCEEEEGGGSTT
T ss_pred CCEEEEEC-CCChhHHHHHHHHHHcCCCCeEEEeecCCC
Confidence 45666665 556889999999999999999999987543
No 253
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=22.83 E-value=67 Score=27.79 Aligned_cols=32 Identities=22% Similarity=0.328 Sum_probs=24.3
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEec
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~ 273 (305)
.|++||+.|..- +.++..|.+.|+++.||+-.
T Consensus 4 ~~vvIIG~G~aG---l~~A~~l~~~g~~v~vie~~ 35 (357)
T 4a9w_A 4 VDVVVIGGGQSG---LSAGYFLRRSGLSYVILDAE 35 (357)
T ss_dssp EEEEEECCSHHH---HHHHHHHHHSSCCEEEECCS
T ss_pred CCEEEECcCHHH---HHHHHHHHHCCCCEEEEECC
Confidence 379999998743 34455677789999999965
No 254
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=22.65 E-value=1.6e+02 Score=26.13 Aligned_cols=31 Identities=6% Similarity=0.030 Sum_probs=19.7
Q ss_pred CCCeEEEEeccccCCCHHHHHHHHhccCcEEEEe
Q 021963 264 GISCELIDLKTLIPWDKETVEASVRKTGRLLPRS 297 (305)
Q Consensus 264 Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvE 297 (305)
++.+=++| ++=. ++.+++.+++ +.++|+-+=
T Consensus 137 ~lPiilYn-~tg~-l~~~~~~~La-~~pnIvgiK 167 (314)
T 3d0c_A 137 DAPSIIYF-KDAH-LSDDVIKELA-PLDKLVGIK 167 (314)
T ss_dssp SSCEEEEE-CCTT-SCTHHHHHHT-TCTTEEEEE
T ss_pred CCCEEEEe-CCCC-cCHHHHHHHH-cCCCEEEEE
Confidence 56677777 6655 7777776665 456666553
No 255
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=22.49 E-value=61 Score=28.64 Aligned_cols=38 Identities=16% Similarity=0.145 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHh
Q 021963 251 SIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR 288 (305)
Q Consensus 251 ~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~ 288 (305)
....-.+++|+..|+..++|=+||=+|++++...+.+.
T Consensus 217 KPTQhSVk~Lr~~Gi~PDiivcRse~~l~~~~k~KIal 254 (294)
T 2c5m_A 217 KPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISM 254 (294)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEEECSSCCCTTHHHHHHH
T ss_pred CCcHHHHHHHHHcCCCCCEEEEecCCCCCHHHHHHHHH
Confidence 55566778899999999999999999999988766554
No 256
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=22.45 E-value=44 Score=27.82 Aligned_cols=35 Identities=6% Similarity=-0.162 Sum_probs=27.4
Q ss_pred CCcEEEEEeChh-HHHHHHHHHHHHhcCCCeEEEEe
Q 021963 238 GSDITLVGWGAQ-LSIMEQACLDAEKEGISCELIDL 272 (305)
Q Consensus 238 g~dv~Iia~G~~-~~~aleAa~~L~~~Gi~~~vI~~ 272 (305)
++++++.-+|+. ...+.+.++.|++.|.++.||=-
T Consensus 8 ~k~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T 43 (194)
T 1p3y_1 8 DKKLLIGICGSISSVGISSYLLYFKSFFKEIRVVMT 43 (194)
T ss_dssp GCEEEEEECSCGGGGGTHHHHHHHTTTSSEEEEEEC
T ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEc
Confidence 457888888875 46688888999888999888854
No 257
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=22.44 E-value=1.3e+02 Score=25.99 Aligned_cols=28 Identities=21% Similarity=0.214 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHHHhcCCCeEEEEecccc
Q 021963 249 QLSIMEQACLDAEKEGISCELIDLKTLI 276 (305)
Q Consensus 249 ~~~~aleAa~~L~~~Gi~~~vI~~~~i~ 276 (305)
+...+..+++.|++.|.+++++|+....
T Consensus 18 t~~la~~~~~~l~~~g~eV~~~dL~~~~ 45 (273)
T 1d4a_A 18 NYAMKEAAAAALKKKGWEVVESDLYAMN 45 (273)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEETTTTT
T ss_pred HHHHHHHHHHHHHhCCCeEEEEEccccC
Confidence 3455556677888889999999998654
No 258
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=22.35 E-value=76 Score=27.40 Aligned_cols=32 Identities=22% Similarity=0.243 Sum_probs=24.1
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEec
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~ 273 (305)
.|++||+-|..-- .++-.|.+.|+++.|++-.
T Consensus 3 ~dV~IIGaG~~Gl---~~A~~L~~~G~~V~vlE~~ 34 (336)
T 1yvv_A 3 VPIAIIGTGIAGL---SAAQALTAAGHQVHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHH---HHHHHHHHTTCCEEEECSS
T ss_pred ceEEEECCcHHHH---HHHHHHHHCCCcEEEEECC
Confidence 4899999887432 2455677789999999865
No 259
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=22.22 E-value=59 Score=29.15 Aligned_cols=40 Identities=13% Similarity=0.196 Sum_probs=29.6
Q ss_pred ceEEeeeCCcEEEEEeChhH--HHHHHHHHHHHhcCCCeEEE
Q 021963 231 EAEVIREGSDITLVGWGAQL--SIMEQACLDAEKEGISCELI 270 (305)
Q Consensus 231 k~~~~~~g~dv~Iia~G~~~--~~aleAa~~L~~~Gi~~~vI 270 (305)
|...+++|+.|.|||..+.+ .....+.+.|++.|+++.+-
T Consensus 10 ~~~~L~~Gd~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~ 51 (311)
T 1zl0_A 10 DQTWQPIDGRVALIAPASAIATDVLEATLRQLEVHGVDYHLG 51 (311)
T ss_dssp CCCCCCCCSEEEEECCSBCCCHHHHHHHHHHHHHTTCCEEEC
T ss_pred ccccCCCcCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEC
Confidence 44557788999999987654 34456778999999988653
No 260
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=22.19 E-value=47 Score=27.76 Aligned_cols=15 Identities=20% Similarity=0.195 Sum_probs=8.2
Q ss_pred CCcEEEEEeChhHHHH
Q 021963 238 GSDITLVGWGAQLSIM 253 (305)
Q Consensus 238 g~dv~Iia~G~~~~~a 253 (305)
|-++.+|- |.....+
T Consensus 122 gi~v~viP-GiSs~~a 136 (232)
T 2qbu_A 122 GFKTEMVP-GVTSFTA 136 (232)
T ss_dssp TCCEEEEC-CCCHHHH
T ss_pred CCcEEEeC-CccHHHH
Confidence 55666654 6555444
No 261
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=22.15 E-value=69 Score=28.31 Aligned_cols=33 Identities=21% Similarity=0.176 Sum_probs=23.8
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEecc
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKT 274 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~ 274 (305)
.|++||+.|..-. .+|-.|.+.|.+|.||+-..
T Consensus 18 ~dvvIIGgG~~Gl---~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 18 YEAVVIGGGIIGS---AIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEECCSHHHH---HHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHH---HHHHHHHhCCCcEEEEeCCC
Confidence 4899999997532 23445666799999999653
No 262
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=22.09 E-value=2.4e+02 Score=24.64 Aligned_cols=22 Identities=18% Similarity=-0.005 Sum_probs=12.1
Q ss_pred CHHHHHHHHhccCcEEEEeCCc
Q 021963 279 DKETVEASVRKTGRLLPRSSGY 300 (305)
Q Consensus 279 d~~~i~~~~~~~~~vvvvEe~~ 300 (305)
|.+.|.+.+++++.+|++++-+
T Consensus 161 ~~~~i~~l~~~~~~~li~Dea~ 182 (396)
T 2ch1_A 161 PLEGVGQICHQHDCLLIVDAVA 182 (396)
T ss_dssp CCTTHHHHHHHTTCEEEEECTT
T ss_pred CHHHHHHHHHHcCCEEEEEccc
Confidence 3445556666665555555543
No 263
>1ptf_A Histidine-containing phosphocarrier protein HPR; phosphotransferase; 1.60A {Enterococcus faecalis} SCOP: d.94.1.1 PDB: 1qfr_A 1fu0_A*
Probab=22.07 E-value=1.1e+02 Score=21.75 Aligned_cols=27 Identities=26% Similarity=0.237 Sum_probs=22.8
Q ss_pred eeCCcEEEEEeChhHHHHHHHHHHHHh
Q 021963 236 REGSDITLVGWGAQLSIMEQACLDAEK 262 (305)
Q Consensus 236 ~~g~dv~Iia~G~~~~~aleAa~~L~~ 262 (305)
++|..++|.+.|.--..|+++...|-+
T Consensus 56 ~~g~~i~i~~~G~De~~A~~~l~~l~~ 82 (88)
T 1ptf_A 56 GQGSDVTITVDGADEAEGMAAIVETLQ 82 (88)
T ss_dssp CTTCEEEEEEESTTHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEeCCCHHHHHHHHHHHHH
Confidence 578899999999999999988876644
No 264
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=22.05 E-value=2.1e+02 Score=24.28 Aligned_cols=49 Identities=24% Similarity=0.281 Sum_probs=30.3
Q ss_pred EEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccCcEEEE
Q 021963 241 ITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLPR 296 (305)
Q Consensus 241 v~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvv 296 (305)
.+|| +|..-...+..++.|.++|.++-+.|. +++.+.+..+...++..+
T Consensus 4 ~vlV-TGas~GIG~aia~~la~~Ga~V~~~~~------~~~~~~~~~~~~~~~~~~ 52 (247)
T 3ged_A 4 GVIV-TGGGHGIGKQICLDFLEAGDKVCFIDI------DEKRSADFAKERPNLFYF 52 (247)
T ss_dssp EEEE-ESTTSHHHHHHHHHHHHTTCEEEEEES------CHHHHHHHHTTCTTEEEE
T ss_pred EEEE-ecCCCHHHHHHHHHHHHCCCEEEEEeC------CHHHHHHHHHhcCCEEEE
Confidence 3444 466667777778888888888777764 345555555544444443
No 265
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=21.98 E-value=71 Score=26.19 Aligned_cols=35 Identities=0% Similarity=-0.013 Sum_probs=27.0
Q ss_pred cEEEEEeChh-HHHHHHHHHHHHhcCCCeEEEEecc
Q 021963 240 DITLVGWGAQ-LSIMEQACLDAEKEGISCELIDLKT 274 (305)
Q Consensus 240 dv~Iia~G~~-~~~aleAa~~L~~~Gi~~~vI~~~~ 274 (305)
++++.-+|+. ...+.+.++.|+++|.++.||=-+.
T Consensus 4 ~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T~~ 39 (181)
T 1g63_A 4 KLLICATASINVININHYIVELKQHFDEVNILFSPS 39 (181)
T ss_dssp CEEEEECSCGGGGGHHHHHHHHTTTSSCEEEEECGG
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEchh
Confidence 5777777764 5688888999988899999885443
No 266
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=21.92 E-value=77 Score=28.12 Aligned_cols=38 Identities=16% Similarity=0.145 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHh
Q 021963 251 SIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR 288 (305)
Q Consensus 251 ~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~ 288 (305)
....-.+++|++-||..++|=+||=+|+|++...+...
T Consensus 217 KPTQhSVkeLr~~GIqPDiivcRse~pl~~~~k~KIAl 254 (295)
T 2vo1_A 217 KPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISM 254 (295)
T ss_dssp HHHHHHHHHHHHHTCCCSEEEEECSSCCCHHHHHHHHH
T ss_pred cchHhHHHHHHhcCCCCCeeeecCCCCCCHHHHHHHHH
Confidence 45566778899999999999999999999987766544
No 267
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=21.92 E-value=87 Score=23.00 Aligned_cols=31 Identities=23% Similarity=0.228 Sum_probs=22.5
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEe
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~ 272 (305)
.+++|+++|.+... .++.|.+.|.++.++|.
T Consensus 5 m~i~IiG~G~iG~~---~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 5 MYIIIAGIGRVGYT---LAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp CEEEEECCSHHHHH---HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCHHHHH---HHHHHHhCCCeEEEEEC
Confidence 46888988876554 34567777888888874
No 268
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=21.89 E-value=1.4e+02 Score=25.05 Aligned_cols=50 Identities=10% Similarity=0.025 Sum_probs=34.8
Q ss_pred cEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhc
Q 021963 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRK 289 (305)
Q Consensus 240 dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~ 289 (305)
...|+-+|..-......++.|.++|.++.+++-...--.|.+.+.+.++.
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~Dl~d~~~~~~~~~~ 61 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNE 61 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHH
T ss_pred cceEEEECCCChHHHHHHHHHHhCCCeEEeccCccCCCCCHHHHHHHHHh
Confidence 34555567766677777888888898877776554455567778777763
No 269
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=21.85 E-value=2.8e+02 Score=22.47 Aligned_cols=47 Identities=13% Similarity=0.120 Sum_probs=31.1
Q ss_pred cEEEEEeChh-HHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHh
Q 021963 240 DITLVGWGAQ-LSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR 288 (305)
Q Consensus 240 dv~Iia~G~~-~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~ 288 (305)
++.||.-|.. ...+.+|++.|++-|+..+ +.+-++.-.+++. .++++
T Consensus 7 ~V~IimgS~SD~~v~~~a~~~l~~~gi~~e-v~V~SaHRtp~~l-~~~~~ 54 (166)
T 3oow_A 7 QVGVIMGSKSDWSTMKECCDILDNLGIGYE-CEVVSAHRTPDKM-FDYAE 54 (166)
T ss_dssp EEEEEESSGGGHHHHHHHHHHHHHTTCEEE-EEECCTTTCHHHH-HHHHH
T ss_pred eEEEEECcHHhHHHHHHHHHHHHHcCCCEE-EEEEcCcCCHHHH-HHHHH
Confidence 4666665543 7889999999999899655 4455555566544 35444
No 270
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=21.84 E-value=1.2e+02 Score=24.56 Aligned_cols=52 Identities=17% Similarity=0.191 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEecccc--C----------------CCHHHHHHHHhccCcEEEEeCCccc
Q 021963 250 LSIMEQACLDAEKEGISCELIDLKTLI--P----------------WDKETVEASVRKTGRLLPRSSGYWR 302 (305)
Q Consensus 250 ~~~aleAa~~L~~~Gi~~~vI~~~~i~--P----------------~d~~~i~~~~~~~~~vvvvEe~~~~ 302 (305)
...+..+++.+ +.|.+++++|+.... | -|.+.+.+.++..+.||++=.-|+.
T Consensus 17 ~~l~~~~~~~~-~~g~~v~~~dL~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~AD~iV~~~P~y~~ 86 (196)
T 3lcm_A 17 AEILKQVQTNL-SKEHTVSTLDLYAEHFDPVLQFNETHKRRDLAKVAEMEKYRDLVTWADHLIFIFPIWWS 86 (196)
T ss_dssp HHHHHHHHHHS-CTTSEEEEEETTTTTCCCCCCCCSSSCGGGGGGCGGGHHHHHHHHHCSEEEEEEECBTT
T ss_pred HHHHHHHHHHh-cCCCeEEEEEcccCCCCccCChHHHHhhcCCCCcHHHHHHHHHHHhCCEEEEECchhhc
Confidence 34444555666 679999999998664 3 1235677778888888887655543
No 271
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*
Probab=21.68 E-value=50 Score=28.33 Aligned_cols=19 Identities=5% Similarity=0.060 Sum_probs=10.6
Q ss_pred HHHHHHHhccCcEEEEeCC
Q 021963 281 ETVEASVRKTGRLLPRSSG 299 (305)
Q Consensus 281 ~~i~~~~~~~~~vvvvEe~ 299 (305)
+.+.+.++....+++.+..
T Consensus 164 ~~l~~~~~~~~t~vl~~~~ 182 (259)
T 2e0n_A 164 GELERALVTHSTVVVMKLS 182 (259)
T ss_dssp HHHHHHHTTCSEEEECCTT
T ss_pred HHHHHHhhcCCEEEEEccc
Confidence 5566666555556555543
No 272
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=21.68 E-value=1.1e+02 Score=26.90 Aligned_cols=35 Identities=17% Similarity=0.148 Sum_probs=27.7
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEecc
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKT 274 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~ 274 (305)
+|..++||+.|.. +...++.|.+.|.++.||+...
T Consensus 12 ~~k~VLVVGgG~v---a~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEV---GLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHH---HHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHH---HHHHHHHHHhCCCEEEEEcCCC
Confidence 5678999999974 4445667888899999999865
No 273
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=21.64 E-value=1e+02 Score=22.68 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=23.2
Q ss_pred CCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEe
Q 021963 238 GSDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (305)
Q Consensus 238 g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~ 272 (305)
++.++|++.|.+... .++.|.+.|.++.++|.
T Consensus 6 ~~~v~I~G~G~iG~~---~a~~l~~~g~~v~~~d~ 37 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGS---IVKELHRMGHEVLAVDI 37 (144)
T ss_dssp CCSEEEECCSHHHHH---HHHHHHHTTCCCEEEES
T ss_pred CCcEEEECCCHHHHH---HHHHHHHCCCEEEEEeC
Confidence 457889998876554 34567777888888874
No 274
>1y51_A Phosphocarrier protein HPR; bacillus stearothermophilus HPR F29W mutant, transport protein; 1.65A {Geobacillus stearothermophilus} PDB: 1y50_A 1y4y_A 2nzu_L* 1rzr_T* 2nzv_L* 2oen_L* 2fep_S* 3oqm_S* 3oqn_S* 3oqo_S*
Probab=21.59 E-value=1e+02 Score=21.91 Aligned_cols=27 Identities=22% Similarity=0.212 Sum_probs=22.7
Q ss_pred eeCCcEEEEEeChhHHHHHHHHHHHHh
Q 021963 236 REGSDITLVGWGAQLSIMEQACLDAEK 262 (305)
Q Consensus 236 ~~g~dv~Iia~G~~~~~aleAa~~L~~ 262 (305)
++|..++|.+.|.-...|+++.+.|-+
T Consensus 56 ~~g~~i~i~~~G~De~~A~~~l~~l~~ 82 (88)
T 1y51_A 56 PKGATIKITAEGADAAEAMAALTDTLA 82 (88)
T ss_dssp CTTCEEEEEEESTTHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEeCCCHHHHHHHHHHHHH
Confidence 578899999999999999988876654
No 275
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=21.53 E-value=1.1e+02 Score=24.77 Aligned_cols=58 Identities=10% Similarity=0.103 Sum_probs=39.1
Q ss_pred EEEEEeChhHH-HHHHHHHHHHhcCCCeEEEEecccc-----------------------CCCHHHHHHHHhccC-cEEE
Q 021963 241 ITLVGWGAQLS-IMEQACLDAEKEGISCELIDLKTLI-----------------------PWDKETVEASVRKTG-RLLP 295 (305)
Q Consensus 241 v~Iia~G~~~~-~aleAa~~L~~~Gi~~~vI~~~~i~-----------------------P~d~~~i~~~~~~~~-~vvv 295 (305)
++|++=|.... ...++++.+++.|+.+-+|.+..-. .+|.+.|++++..++ ..+.
T Consensus 115 ivllTDG~~~~~~~~~~~~~~~~~~i~v~~igig~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~L~~iA~~~gG~~~~ 194 (218)
T 3ibs_A 115 IIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTNDYRRDREGNVIVTRLNEGMCQEIAKDGKGIYVR 194 (218)
T ss_dssp EEEEECCTTCCSCHHHHHHHHHTTTEEEEEEEESCTTCEECBCTTSSCBCBCTTSCBCEECCCHHHHHHHHHHTEEEEEE
T ss_pred EEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEEecCCCCCcccccCCCceeEcCCCCEeEecCCHHHHHHHHHhcCCEEEE
Confidence 45555554322 3567778888889998888887632 578888988888764 4554
Q ss_pred EeC
Q 021963 296 RSS 298 (305)
Q Consensus 296 vEe 298 (305)
+.+
T Consensus 195 ~~~ 197 (218)
T 3ibs_A 195 VDN 197 (218)
T ss_dssp ECS
T ss_pred CCC
Confidence 543
No 276
>1kkl_H Phosphocarrier protein HPR; phosphorylation, protein kinase, bacteria, protein/protein interaction, transferase; 2.80A {Bacillus subtilis} SCOP: d.94.1.1 PDB: 1kkm_H*
Probab=21.48 E-value=99 Score=22.75 Aligned_cols=65 Identities=22% Similarity=0.163 Sum_probs=39.4
Q ss_pred HHHHHHHHHHhHhCCCCEEEeccccccccCccCCCCCCC--cccCCceEEeeeCCcEEEEEeChhHHHHHHHHHHHHh
Q 021963 187 PRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDY--MLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 262 (305)
Q Consensus 187 ~~e~~~~l~~a~~~~~Pv~i~~~~~l~~~~~~~~~~~~~--~~~~gk~~~~~~g~dv~Iia~G~~~~~aleAa~~L~~ 262 (305)
+.-+..+.+.|-+++..+.|....+ .++.... -+-+| +++|..++|.+.|.-..+|+++...|-+
T Consensus 28 ARPAa~~v~~A~~f~s~I~i~~~~~-------~vdAKSIm~lmsLg----~~~G~~i~i~a~G~Dee~Al~~l~~li~ 94 (100)
T 1kkl_H 28 ARPATVLVQTASKYDADVNLEYNGK-------TVNLKSIMGVMSLG----IAKGAEITISASGADENDALNALEETMK 94 (100)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEETTE-------EEETTCHHHHHHTC----CCTTCEEEEEEESTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCeEEEEECCE-------EEecHhHHHHhcCC----CCCCCEEEEEEeCCCHHHHHHHHHHHHH
Confidence 4455666777777777777743211 1100000 01122 3578899999999999999988876644
No 277
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=21.35 E-value=67 Score=28.88 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=23.7
Q ss_pred CCcEEEEEeChhHHHHHHHHHHHHhc--CCCeEEEEecc
Q 021963 238 GSDITLVGWGAQLSIMEQACLDAEKE--GISCELIDLKT 274 (305)
Q Consensus 238 g~dv~Iia~G~~~~~aleAa~~L~~~--Gi~~~vI~~~~ 274 (305)
|++|+||+.|..- +.|+..|++. +.++.||+...
T Consensus 2 GKkVvIIG~G~AG---~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 2 GRKVVVVGGGTGG---ATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp CCEEEEECCSHHH---HHHHHHHHHHCTTSEEEEECSCS
T ss_pred cCEEEEECCcHHH---HHHHHHHHhcCcCCeEEEEeCCC
Confidence 7889999999754 3345555544 46789998653
No 278
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=21.34 E-value=1e+02 Score=25.42 Aligned_cols=34 Identities=21% Similarity=0.073 Sum_probs=26.5
Q ss_pred cEEEEEeCh-hHHHHHHHHHHHHhcCCCeEEEEec
Q 021963 240 DITLVGWGA-QLSIMEQACLDAEKEGISCELIDLK 273 (305)
Q Consensus 240 dv~Iia~G~-~~~~aleAa~~L~~~Gi~~~vI~~~ 273 (305)
++++.-+|+ ....+.+.++.|++.|.++.||=-.
T Consensus 3 ~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T~ 37 (189)
T 2ejb_A 3 KIALCITGASGVIYGIKLLQVLEELDFSVDLVISR 37 (189)
T ss_dssp EEEEEECSSTTHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECh
Confidence 577777886 4577888889998889998888443
No 279
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=21.33 E-value=86 Score=26.96 Aligned_cols=29 Identities=34% Similarity=0.521 Sum_probs=0.0
Q ss_pred cEEEEEeChhHHHHHHHHHHHHhcCCCeEEEE
Q 021963 240 DITLVGWGAQLSIMEQACLDAEKEGISCELID 271 (305)
Q Consensus 240 dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~ 271 (305)
|++||+.|. ..+.++..|.+.|.++.||+
T Consensus 18 dvvIIG~G~---aGl~aA~~l~~~g~~v~lie 46 (319)
T 3cty_A 18 DVVIVGAGA---AGFSAAVYAARSGFSVAILD 46 (319)
T ss_dssp EEEEECCSH---HHHHHHHHHHHTTCCEEEEE
T ss_pred cEEEECcCH---HHHHHHHHHHhCCCcEEEEe
No 280
>1sph_A Histidine-containing phosphocarrier protein HPR; phosphotransferase; 2.00A {Bacillus subtilis} SCOP: d.94.1.1 PDB: 1jem_A* 2hid_A 2hpr_A
Probab=21.28 E-value=1.1e+02 Score=21.76 Aligned_cols=27 Identities=26% Similarity=0.255 Sum_probs=22.8
Q ss_pred eeCCcEEEEEeChhHHHHHHHHHHHHh
Q 021963 236 REGSDITLVGWGAQLSIMEQACLDAEK 262 (305)
Q Consensus 236 ~~g~dv~Iia~G~~~~~aleAa~~L~~ 262 (305)
++|..++|.+.|.--..|+++.+.|-+
T Consensus 56 ~~g~~i~i~~~G~De~~A~~~l~~l~~ 82 (88)
T 1sph_A 56 AKGAEITISASGADENDALNALEETMK 82 (88)
T ss_dssp CTTCEEEEEEESTTHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEeCCCHHHHHHHHHHHHH
Confidence 578899999999999999988876644
No 281
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=21.24 E-value=86 Score=27.09 Aligned_cols=32 Identities=25% Similarity=0.302 Sum_probs=23.8
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEec
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~ 273 (305)
.|++||+.|..- +.++..|.+.|+++.||+-.
T Consensus 6 ~~vvIIG~G~aG---l~aA~~l~~~g~~v~lie~~ 37 (335)
T 2zbw_A 6 TDVLIVGAGPTG---LFAGFYVGMRGLSFRFVDPL 37 (335)
T ss_dssp EEEEEECCSHHH---HHHHHHHHHTTCCEEEEESS
T ss_pred CcEEEECCCHHH---HHHHHHHHhCCCCEEEEeCC
Confidence 479999998743 23455666779999999864
No 282
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=21.19 E-value=85 Score=28.08 Aligned_cols=77 Identities=14% Similarity=0.233 Sum_probs=46.0
Q ss_pred EEEeeCCHHHHHHHHHHhHhCCCCEEEecccc-ccccCccCCCCCCCccc---CCceEEeeeCCcEEEEEeChhHHHHHH
Q 021963 180 KVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKW-LYRLSVEEVPEDDYMLP---LSEAEVIREGSDITLVGWGAQLSIMEQ 255 (305)
Q Consensus 180 ~V~~P~d~~e~~~~l~~a~~~~~Pv~i~~~~~-l~~~~~~~~~~~~~~~~---~gk~~~~~~g~dv~Iia~G~~~~~ale 255 (305)
.|+.|.|.+|+..+++++-+++.|++++-... +.- ...+....-+. +.+.++ + .+.+.+..|.......+
T Consensus 51 ~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~---~~~~~~gvvI~l~~m~~i~i--d-~~~v~v~aGv~~~~l~~ 124 (326)
T 1hsk_A 51 FYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIII---REGGIRGIVISLLSLDHIEV--S-DDAIIAGSGAAIIDVSR 124 (326)
T ss_dssp EEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEE---CTTCEEEEEEECTTCCCEEE--E-TTEEEEETTSBHHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCcccc---CCCCCCeEEEEeCCCCceEE--c-CCEEEEeCCCcHHHHHH
Confidence 58999999999999999999999999853211 000 00000001111 222221 2 35777888888887765
Q ss_pred HHHHHHhcCC
Q 021963 256 ACLDAEKEGI 265 (305)
Q Consensus 256 Aa~~L~~~Gi 265 (305)
++ .++|.
T Consensus 125 ~l---~~~Gl 131 (326)
T 1hsk_A 125 VA---RDYAL 131 (326)
T ss_dssp HH---HHTTE
T ss_pred HH---HHCCC
Confidence 54 44454
No 283
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=21.12 E-value=88 Score=22.62 Aligned_cols=32 Identities=6% Similarity=-0.060 Sum_probs=20.3
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEE
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELI 270 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI 270 (305)
++..++++|.+ . ..+..|+..|++.|+++.++
T Consensus 54 ~~~~ivvyC~~-G-~rs~~aa~~L~~~G~~v~~l 85 (108)
T 3gk5_A 54 RDKKYAVICAH-G-NRSAAAVEFLSQLGLNIVDV 85 (108)
T ss_dssp TTSCEEEECSS-S-HHHHHHHHHHHTTTCCEEEE
T ss_pred CCCeEEEEcCC-C-cHHHHHHHHHHHcCCCEEEE
Confidence 34556666533 2 44677889999999954443
No 284
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=21.11 E-value=70 Score=26.11 Aligned_cols=47 Identities=6% Similarity=0.019 Sum_probs=33.1
Q ss_pred CcEEEEEeChh-HHHHHHHHHHHHhcCCCeEEEEeccccC-CCHHHHHH
Q 021963 239 SDITLVGWGAQ-LSIMEQACLDAEKEGISCELIDLKTLIP-WDKETVEA 285 (305)
Q Consensus 239 ~dv~Iia~G~~-~~~aleAa~~L~~~Gi~~~vI~~~~i~P-~d~~~i~~ 285 (305)
+++++.-+|+. ...+.+.++.|++.|.++.||=-+.-+- +..+++..
T Consensus 6 k~IllgvTGs~aa~k~~~ll~~L~~~g~~V~vv~T~~A~~fi~~~~l~~ 54 (175)
T 3qjg_A 6 ENVLICLCGSVNSINISHYIIELKSKFDEVNVIASTNGRKFINGEILKQ 54 (175)
T ss_dssp CEEEEEECSSGGGGGHHHHHHHHTTTCSEEEEEECTGGGGGSCHHHHHH
T ss_pred CEEEEEEeCHHHHHHHHHHHHHHHHCCCEEEEEECcCHHHHhhHHHHHH
Confidence 46777777764 5678888899998999999886655444 33445533
No 285
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=21.08 E-value=57 Score=23.31 Aligned_cols=30 Identities=17% Similarity=0.079 Sum_probs=19.3
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeE
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCE 268 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~ 268 (305)
+++.++++|.+. ..+..|+..|++.|+++.
T Consensus 55 ~~~~iv~yC~~g--~rs~~a~~~L~~~G~~v~ 84 (103)
T 3eme_A 55 KNEIYYIVCAGG--VRSAKVVEYLEANGIDAV 84 (103)
T ss_dssp TTSEEEEECSSS--SHHHHHHHHHHTTTCEEE
T ss_pred CCCeEEEECCCC--hHHHHHHHHHHHCCCCeE
Confidence 344565555433 456778889999998443
No 286
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=21.03 E-value=1.3e+02 Score=26.84 Aligned_cols=36 Identities=14% Similarity=0.160 Sum_probs=23.5
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEecc
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKT 274 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~ 274 (305)
+|++++||+.|.++... ++..|...|..+.+.+-++
T Consensus 164 ~Gk~vvVIG~s~iVG~p--~A~lL~~~gAtVtv~~~~T 199 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGAP--VAALLMKENATVTIVHSGT 199 (300)
T ss_dssp TTCEEEEECCCTTTHHH--HHHHHHHTTCEEEEECTTS
T ss_pred CCCEEEEECCCchHHHH--HHHHHHHCCCeEEEEeCCC
Confidence 45678888877765544 3445666677777777544
No 287
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=21.01 E-value=1.3e+02 Score=28.82 Aligned_cols=54 Identities=15% Similarity=0.161 Sum_probs=36.1
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccc-----------cCCCHHHHHHH-HhccCcEEE
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTL-----------IPWDKETVEAS-VRKTGRLLP 295 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i-----------~P~d~~~i~~~-~~~~~~vvv 295 (305)
..++|+++|.... ..++.|.++|+++.+||...- .+-|.+.|++. +.+.+.+++
T Consensus 349 ~~viIiG~G~~G~---~la~~L~~~g~~v~vid~d~~~~~~~~~~i~gD~t~~~~L~~agi~~ad~vi~ 414 (565)
T 4gx0_A 349 ELIFIIGHGRIGC---AAAAFLDRKPVPFILIDRQESPVCNDHVVVYGDATVGQTLRQAGIDRASGIIV 414 (565)
T ss_dssp CCEEEECCSHHHH---HHHHHHHHTTCCEEEEESSCCSSCCSSCEEESCSSSSTHHHHHTTTSCSEEEE
T ss_pred CCEEEECCCHHHH---HHHHHHHHCCCCEEEEECChHHHhhcCCEEEeCCCCHHHHHhcCccccCEEEE
Confidence 6799999998765 446678888999999995432 34556666543 444444443
No 288
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=21.01 E-value=1.3e+02 Score=25.79 Aligned_cols=49 Identities=12% Similarity=0.116 Sum_probs=32.6
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHh
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR 288 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~ 288 (305)
.+++++||+.|.. +++.+..|.+.|.++.++....--+.......+.++
T Consensus 158 ~~~~v~VvG~G~~---g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~~~~ 206 (333)
T 1vdc_A 158 RNKPLAVIGGGDS---AMEEANFLTKYGSKVYIIHRRDAFRASKIMQQRALS 206 (333)
T ss_dssp TTSEEEEECCSHH---HHHHHHHHTTTSSEEEEECSSSSCCSCHHHHHHHHT
T ss_pred CCCeEEEECCChH---HHHHHHHHHhcCCeEEEEecCCcCCccHHHHHHHHh
Confidence 4678999988864 556777788889999999876533333333334443
No 289
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=20.99 E-value=2.6e+02 Score=21.74 Aligned_cols=50 Identities=12% Similarity=0.071 Sum_probs=32.5
Q ss_pred cEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCC--HHHHHHHHhc
Q 021963 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWD--KETVEASVRK 289 (305)
Q Consensus 240 dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d--~~~i~~~~~~ 289 (305)
.++|++.|......+++++.+--.--.+..+++..=...+ .+.+.+.+++
T Consensus 3 giii~sHg~~A~gl~~~~~~i~G~~~~i~av~~~~~~~~~~~~~~i~~~i~~ 54 (150)
T 3ipr_A 3 GIVIATHGALSDGAKDAATVIMGATENIETVNLNSGDDVQALGGQIKTAIEN 54 (150)
T ss_dssp EEEEEEETTHHHHHHHHHHHHHSCCCSEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEECcHHHHHHHHHHHHHcCCCCCEEEEEecCCCCHHHHHHHHHHHHHh
Confidence 4789999988888888998775433567788875332222 1334455543
No 290
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=20.96 E-value=2.2e+02 Score=23.55 Aligned_cols=61 Identities=31% Similarity=0.199 Sum_probs=35.7
Q ss_pred eCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCH---HHHHHHHhccCcEEEEeCCcc
Q 021963 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDK---ETVEASVRKTGRLLPRSSGYW 301 (305)
Q Consensus 237 ~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~---~~i~~~~~~~~~vvvvEe~~~ 301 (305)
++.|+++++++...+.-. +.+.| +.|. .||+..++.+-+. +.|.+.+++.+..+.++.+..
T Consensus 49 ~~~DvVv~~~~~~~~~~~-~~~~l-~~G~--~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~ 112 (236)
T 2dc1_A 49 REMDVAVEAASQQAVKDY-AEKIL-KAGI--DLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAI 112 (236)
T ss_dssp SCCSEEEECSCHHHHHHH-HHHHH-HTTC--EEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTC
T ss_pred CCCCEEEECCCHHHHHHH-HHHHH-HCCC--cEEEECcccCChHHHHHHHHHHHHhcCCeEEecCccc
Confidence 356888888887643221 22333 3454 5777766665555 456666666666566776644
No 291
>1pch_A Phosphocarrier protein; phosphotransferase; 1.80A {Mycoplasma capricolum} SCOP: d.94.1.1
Probab=20.85 E-value=1e+02 Score=22.02 Aligned_cols=26 Identities=23% Similarity=0.247 Sum_probs=21.9
Q ss_pred eeCCcEEEEEeChhHHHHHHHHHHHH
Q 021963 236 REGSDITLVGWGAQLSIMEQACLDAE 261 (305)
Q Consensus 236 ~~g~dv~Iia~G~~~~~aleAa~~L~ 261 (305)
+.|..++|.+.|.--..|+++...|-
T Consensus 55 ~~G~~i~i~a~G~De~~Al~~l~~l~ 80 (88)
T 1pch_A 55 KTGTEITIQADGNDADQAIQAIKQTM 80 (88)
T ss_dssp CTTCEEEEEEESTTHHHHHHHHHHHH
T ss_pred CCCCEEEEEEeCCCHHHHHHHHHHHH
Confidence 57889999999999999998877553
No 292
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=20.81 E-value=91 Score=27.96 Aligned_cols=28 Identities=18% Similarity=0.491 Sum_probs=26.2
Q ss_pred EEEeeCCHHHHHHHHHHhHhCCCCEEEe
Q 021963 180 KVVIPRSPRQAKGLLLSCIRDPNPVVFF 207 (305)
Q Consensus 180 ~V~~P~d~~e~~~~l~~a~~~~~Pv~i~ 207 (305)
.++.|.|.+|+..+++++-+.+-|++++
T Consensus 57 ~vv~P~s~eev~~~v~~a~~~~~pv~v~ 84 (322)
T 3tx1_A 57 VFVMPKTIEEAQEVVAYCHQNKIPLTIL 84 (322)
T ss_dssp EEEECSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCcEEEE
Confidence 5999999999999999999999999985
No 293
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=20.72 E-value=1.9e+02 Score=25.39 Aligned_cols=32 Identities=9% Similarity=0.143 Sum_probs=17.0
Q ss_pred CCCeEEEEecc--ccCCCHHHHHHHHhccCcEEEE
Q 021963 264 GISCELIDLKT--LIPWDKETVEASVRKTGRLLPR 296 (305)
Q Consensus 264 Gi~~~vI~~~~--i~P~d~~~i~~~~~~~~~vvvv 296 (305)
++.+=++|.+. =..++.+++.+++ +.++|+-+
T Consensus 138 ~lPiilYn~P~~tg~~l~~~~~~~La-~~pnIvgi 171 (301)
T 1xky_A 138 PLPVMLYNVPGRSIVQISVDTVVRLS-EIENIVAI 171 (301)
T ss_dssp SSCEEEEECHHHHSSCCCHHHHHHHH-TSTTEEEE
T ss_pred CCCEEEEeCccccCCCCCHHHHHHHH-cCCCEEEE
Confidence 55556666543 2345566665554 34555544
No 294
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=20.71 E-value=81 Score=25.00 Aligned_cols=36 Identities=14% Similarity=0.202 Sum_probs=30.0
Q ss_pred eeCCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEE
Q 021963 236 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELID 271 (305)
Q Consensus 236 ~~g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~ 271 (305)
.+.+.+.+++.|.....|..++..|..-|+.+.+++
T Consensus 37 ~~a~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~ 72 (187)
T 3sho_A 37 CRADHVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLT 72 (187)
T ss_dssp HHCSEEEEECCGGGHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HhCCEEEEEecCchHHHHHHHHHHHHhcCCCEEEec
Confidence 345688999999999999998888888888888776
No 295
>1ati_A Glycyl-tRNA synthetase; protein biosynthesis, ligase, aminoacyl-tRNA SYN; 2.75A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1b76_A* 1ggm_A*
Probab=20.67 E-value=1.4e+02 Score=28.48 Aligned_cols=56 Identities=5% Similarity=-0.185 Sum_probs=38.3
Q ss_pred CcEEEEEeCh----hHHHHHHHHHHHHhcC-CCeEEEEeccccCCCHHHHHHHHhccCcEEEEe
Q 021963 239 SDITLVGWGA----QLSIMEQACLDAEKEG-ISCELIDLKTLIPWDKETVEASVRKTGRLLPRS 297 (305)
Q Consensus 239 ~dv~Iia~G~----~~~~aleAa~~L~~~G-i~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvE 297 (305)
-++.|+..|. ....|.+.++.|++.| +++. +|.+ .-+-.+.=..-..+++-+|||-
T Consensus 399 ~~v~Vip~~~~~~~~~~~a~~l~~~Lr~~G~i~v~-~D~~--~sig~k~~~ad~~g~p~~iivG 459 (505)
T 1ati_A 399 IKVAVIPLVKNRPEITEYAKRLKARLLALGLGRVL-YEDT--GNIGKAYRRHDEVGTPFAVTVD 459 (505)
T ss_dssp CSEEEEESCSSCHHHHHHHHHHHHHHHTTCSSCEE-ECCC--SCHHHHHHHHHHTTCSEEEEEC
T ss_pred ceEEEEEcCCccHHHHHHHHHHHHHHhccCCEEEE-ECCC--CCHHHHHHHHHHCCCCEEEEEC
Confidence 3789999885 6788899999999999 9987 4544 3343332222344667777773
No 296
>1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1
Probab=20.59 E-value=1.1e+02 Score=27.86 Aligned_cols=56 Identities=11% Similarity=-0.022 Sum_probs=35.3
Q ss_pred CcEEEEEeCh-hHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHH-HhccCcEEEEe
Q 021963 239 SDITLVGWGA-QLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEAS-VRKTGRLLPRS 297 (305)
Q Consensus 239 ~dv~Iia~G~-~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~-~~~~~~vvvvE 297 (305)
.++.|+..+. ....|.+.++.|+++|++|.+-+ +. ..+ .+.++.. ..+.+.+|+|-
T Consensus 330 ~~v~i~~~~~~~~~~a~~l~~~Lr~~Gi~v~~d~-~~-~~~-~~~~~~a~~~g~p~~iiig 387 (420)
T 1qe0_A 330 LDLFIVTMGDQADRYAVKLLNHLRHNGIKADKDY-LQ-RKI-KGQMKQADRLGAKFTIVIG 387 (420)
T ss_dssp CSEEEEECHHHHHHHHHHHHHHHHTTTCCEEECC-SC-CCH-HHHHHHHHHTTCSEEEEEC
T ss_pred CeEEEEEeCHHHHHHHHHHHHHHHHCCCEEEEec-CC-CCH-HHHHHHHHHcCCCEEEEEC
Confidence 3688888774 45678888899999999987654 32 122 2334332 33456677663
No 297
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=20.47 E-value=2.1e+02 Score=25.27 Aligned_cols=32 Identities=3% Similarity=-0.193 Sum_probs=16.1
Q ss_pred CCCeEEEEeccccCCCHHHHHHHHhccCcEEEEeC
Q 021963 264 GISCELIDLKTLIPWDKETVEASVRKTGRLLPRSS 298 (305)
Q Consensus 264 Gi~~~vI~~~~i~P~d~~~i~~~~~~~~~vvvvEe 298 (305)
++.+=++|. -..++.+++.+++ +.++|+-+=+
T Consensus 137 ~lPiilYn~--g~~l~~~~~~~La-~~pnIvgiKd 168 (316)
T 3e96_A 137 DFPSLVYFK--DPEISDRVLVDLA-PLQNLVGVKY 168 (316)
T ss_dssp TSCEEEEEC--CTTSCTHHHHHHT-TCTTEEEEEE
T ss_pred CCCEEEEeC--CCCCCHHHHHHHH-cCCCEEEEEe
Confidence 455555554 2245555555554 4555554433
No 298
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=20.45 E-value=88 Score=27.93 Aligned_cols=33 Identities=18% Similarity=0.248 Sum_probs=23.6
Q ss_pred CcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEecc
Q 021963 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKT 274 (305)
Q Consensus 239 ~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~ 274 (305)
.|++||+.|..--. +|-.|.+.|.+|.||+-..
T Consensus 5 ~DVvIIGaG~~Gl~---~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLA---TAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHH---HHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHH---HHHHHHHCCCeEEEEeCCC
Confidence 48999999975322 3334666799999998653
No 299
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=20.45 E-value=1.9e+02 Score=25.20 Aligned_cols=37 Identities=8% Similarity=0.118 Sum_probs=25.9
Q ss_pred cCCCeEEEEeccc--cCCCHHHHHHHHhccCcEEEEeCC
Q 021963 263 EGISCELIDLKTL--IPWDKETVEASVRKTGRLLPRSSG 299 (305)
Q Consensus 263 ~Gi~~~vI~~~~i--~P~d~~~i~~~~~~~~~vvvvEe~ 299 (305)
-++.+=++|.+.. ..++.+++.+++++.++|+-+=+.
T Consensus 125 ~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiK~s 163 (289)
T 2yxg_A 125 INLPIVLYNVPSRTAVNLEPKTVKLLAEEYSNISAVKEA 163 (289)
T ss_dssp CSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEEC
T ss_pred cCCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEEEeC
Confidence 3778888887643 467888888877567777766443
No 300
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=20.22 E-value=2e+02 Score=22.01 Aligned_cols=48 Identities=8% Similarity=0.024 Sum_probs=34.0
Q ss_pred CCcEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEeccccCCCHHHHHHHHhccC
Q 021963 238 GSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTG 291 (305)
Q Consensus 238 g~dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~~~i~P~d~~~i~~~~~~~~ 291 (305)
..|+++|+.-. ..+.++++++.+.|++.-++... +..+.+.+.+++++
T Consensus 77 ~vDlvvi~vp~--~~~~~vv~~~~~~gi~~i~~~~g----~~~~~l~~~a~~~G 124 (144)
T 2d59_A 77 KIEVVDLFVKP--KLTMEYVEQAIKKGAKVVWFQYN----TYNREASKKADEAG 124 (144)
T ss_dssp CCSEEEECSCH--HHHHHHHHHHHHHTCSEEEECTT----CCCHHHHHHHHHTT
T ss_pred CCCEEEEEeCH--HHHHHHHHHHHHcCCCEEEECCC----chHHHHHHHHHHcC
Confidence 46899998755 67777888887889986555433 33566777777765
No 301
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=20.21 E-value=2e+02 Score=25.11 Aligned_cols=62 Identities=10% Similarity=0.053 Sum_probs=36.2
Q ss_pred CCcEEEEEeCh----hHHHHHHHHHHHH-hcCCCeEEEEeccc--cCCCHHHHHHHHhccCcEEEEeCC
Q 021963 238 GSDITLVGWGA----QLSIMEQACLDAE-KEGISCELIDLKTL--IPWDKETVEASVRKTGRLLPRSSG 299 (305)
Q Consensus 238 g~dv~Iia~G~----~~~~aleAa~~L~-~~Gi~~~vI~~~~i--~P~d~~~i~~~~~~~~~vvvvEe~ 299 (305)
|.|.+++..=. .-....+-.+.+. .-++.+=++|.+.. ..++.+++.+++++.++|+-+=+.
T Consensus 95 Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiKds 163 (294)
T 2ehh_A 95 GADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLASECENIVASKES 163 (294)
T ss_dssp TCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEEC
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHhhCCCEEEEEeC
Confidence 66666554321 1222332233332 33788888888743 468888888877567777766443
No 302
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=20.12 E-value=81 Score=25.83 Aligned_cols=30 Identities=7% Similarity=0.055 Sum_probs=22.0
Q ss_pred cEEEEEeChhHHHHHHHHHHHHhcCCCeEEEEe
Q 021963 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (305)
Q Consensus 240 dv~Iia~G~~~~~aleAa~~L~~~Gi~~~vI~~ 272 (305)
+++|+++|.+.. ..++.|.++|+++.+||.
T Consensus 2 ~iiIiG~G~~G~---~la~~L~~~g~~v~vid~ 31 (218)
T 3l4b_C 2 KVIIIGGETTAY---YLARSMLSRKYGVVIINK 31 (218)
T ss_dssp CEEEECCHHHHH---HHHHHHHHTTCCEEEEES
T ss_pred EEEEECCCHHHH---HHHHHHHhCCCeEEEEEC
Confidence 478888877544 345667778999999983
No 303
>1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A*
Probab=20.09 E-value=1.4e+02 Score=27.26 Aligned_cols=56 Identities=18% Similarity=0.060 Sum_probs=37.0
Q ss_pred CcEEEEEeCh-hHHHHHHHHHHHHhc--CCCeEEEEeccccCCCHHHHHHH-HhccCcEEEEe
Q 021963 239 SDITLVGWGA-QLSIMEQACLDAEKE--GISCELIDLKTLIPWDKETVEAS-VRKTGRLLPRS 297 (305)
Q Consensus 239 ~dv~Iia~G~-~~~~aleAa~~L~~~--Gi~~~vI~~~~i~P~d~~~i~~~-~~~~~~vvvvE 297 (305)
.++.|+..+. ....|.+.++.|+++ |+++.+-+ +. ..+ .+.++.. ..+.+.+|+|-
T Consensus 328 ~~v~i~~~~~~~~~~a~~l~~~Lr~~~~Gi~v~~d~-~~-~~~-~~~~~~a~~~g~p~~iiiG 387 (423)
T 1htt_A 328 VDIYLVASGADTQSAAMALAERLRDELPGVKLMTNH-GG-GNF-KKQFARADKWGARVAVVLG 387 (423)
T ss_dssp CSEEEEECSTTHHHHHHHHHHHHHHHSTTCCEEECC-SC-CCH-HHHHHHHHHHTCSEEEEEC
T ss_pred CcEEEEEcCHHHHHHHHHHHHHHHcCCCCcEEEEeC-CC-CCH-HHHHHHHHHcCCCEEEEEC
Confidence 3788888776 567889999999999 99998644 32 222 2334332 34566777763
No 304
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=20.03 E-value=2.2e+02 Score=24.73 Aligned_cols=23 Identities=9% Similarity=0.177 Sum_probs=13.7
Q ss_pred CCHHHHHHHHhcc--CcEEEEeCCc
Q 021963 278 WDKETVEASVRKT--GRLLPRSSGY 300 (305)
Q Consensus 278 ~d~~~i~~~~~~~--~~vvvvEe~~ 300 (305)
.|.+.|.+.++++ +.++++++-+
T Consensus 154 ~~l~~i~~~~~~~~~~~~li~D~a~ 178 (385)
T 2bkw_A 154 SDLKAISQAIKQTSPETFFVVDAVC 178 (385)
T ss_dssp CCHHHHHHHHHHHCTTSEEEEECTT
T ss_pred cCHHHHHHHHHhhCCCCEEEEECcc
Confidence 4566677777766 5555555543
No 305
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=20.02 E-value=2.7e+02 Score=24.27 Aligned_cols=18 Identities=28% Similarity=0.202 Sum_probs=8.3
Q ss_pred HHHHHHHhccCcEEEEeC
Q 021963 281 ETVEASVRKTGRLLPRSS 298 (305)
Q Consensus 281 ~~i~~~~~~~~~vvvvEe 298 (305)
+.|.+.+++++.++++++
T Consensus 164 ~~i~~~~~~~~~~li~D~ 181 (393)
T 2huf_A 164 EGVGALCHQHNCLLIVDT 181 (393)
T ss_dssp TTHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHcCCEEEEEc
Confidence 344455555444444444
Done!