BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 021968
         (304 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|A2Q8F7|PLPL_ASPNC Patatin-like phospholipase domain-containing protein An01g04180
           OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
           GN=An01g04180 PE=3 SV=1
          Length = 749

 Score = 31.6 bits (70), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 15/132 (11%)

Query: 102 ILFVGDSISLNQWQSLTCMLHLAVPKAKYTLIRTGGLSTFSFPAHNVSVMFSRNAFLVDI 161
           I  V DS  +   + L    HL     +  L  +GG +TF++    V      N  L +I
Sbjct: 247 IQLVADSKGITSEEKLQHFKHLDTNFGRTALCLSGG-ATFAYYHFGVVRALLDNGVLPEI 305

Query: 162 VGEKSGRVLKLNSISSGDLWKTADVLI-------------FDSWHW-WLHTGRKQPSSDW 207
           +   SG  L    +++    +   +L+             F +W W W  TG +  + DW
Sbjct: 306 ITGTSGGALVAALVATRTDEELKQLLVPALAHRIRACQESFPTWVWRWWRTGARFDTLDW 365

Query: 208 GDRNAKNCIGET 219
             + +  C G T
Sbjct: 366 ARQCSWFCRGST 377


>sp|A1XQX2|NR1BA_DANRE Neurexin-1b OS=Danio rerio GN=nrxn1b PE=2 SV=1
          Length = 1470

 Score = 31.6 bits (70), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 8/47 (17%)

Query: 109  ISLNQWQSLTCMLHL--------AVPKAKYTLIRTGGLSTFSFPAHN 147
            + L QW++ TC   +        A P + Y   R GG+ T+S+P H+
Sbjct: 1066 VCLQQWENFTCDCSMTTYAGPLCADPGSTYVFGRQGGVITYSWPPHD 1112


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.322    0.139    0.457 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,233,604
Number of Sequences: 539616
Number of extensions: 5453259
Number of successful extensions: 9709
Number of sequences better than 100.0: 4
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 9709
Number of HSP's gapped (non-prelim): 4
length of query: 304
length of database: 191,569,459
effective HSP length: 117
effective length of query: 187
effective length of database: 128,434,387
effective search space: 24017230369
effective search space used: 24017230369
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)