BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021973
(304 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54PW9|EI24_DICDI Protein EI24 homolog OS=Dictyostelium discoideum GN=DDB_G0284253
PE=3 SV=1
Length = 307
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 41/254 (16%)
Query: 27 GLREACCLHRVVILCRRSTKLLIRTGQCFLLNGFIFLGSMFVLKSAVIPFLLWILPDQCS 86
G+ ++ L +I +S L C LNG IFLG+ + +L W+ P
Sbjct: 29 GVADSMKLKGAIIRTIKSEVLRKNFIHCIFLNGIIFLGTYLI-------YLYWVSP---- 77
Query: 87 QIRSQELCLDSGILKFYSFLRLALIQLLYIFWFYPLYVFSIVLSTLWYNDIAKYGFAAMG 146
+ + +L + L + + W YP+Y+FSI+ ++ WY +IAK F G
Sbjct: 78 --------MLNYLLNHFPTLSNMFTIIYFSLWVYPVYIFSIIANSKWYTEIAKESFVISG 129
Query: 147 RSGQSSKELSRQDETLQNTEQKGRLPGLGGVMIVIGEQVYSMLLLSFFFVEVNAIGFLPY 206
R+ T N+ G++ +++Y LL V I F+PY
Sbjct: 130 RT------------TFANST--------NGILSSFVDEIYRNLLFGVILVMSAIIAFIPY 169
Query: 207 IGKGFNFLLLSWMYAYYCFEYKWNF-SEVGLDKRLDFFESNWAFFAGFGSPCVLAYFFFS 265
NF++++W+Y+++CF+YKW + L +R+ +FE++WA+ G+G FFF
Sbjct: 170 -TNFINFVIITWLYSFWCFDYKWILRGKWNLLQRIQYFETHWAYMFGYGLIFTTCSFFFP 228
Query: 266 PLVAYGVMAILYPL 279
L+ + +ILYPL
Sbjct: 229 MLIGNAIFSILYPL 242
>sp|Q61070|EI24_MOUSE Etoposide-induced protein 2.4 OS=Mus musculus GN=Ei24 PE=1 SV=3
Length = 340
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 35/238 (14%)
Query: 46 KLLIRTGQCFLLNGFIFLGSMFVLKSAVIPFLLWILPDQCSQIRSQELCLDSGIL-KFYS 104
+++ R QC NG +F S+ + IP L Q + + D + +S
Sbjct: 66 RIVSRIFQCCAWNGGVFWFSLLLFYRVFIPVL---------QSVTARIIGDPSLHGDVWS 116
Query: 105 FLRLALIQLLYIFWFYPLYVFSIVLSTLWYNDIAKYGFAAMGRSGQSSKELSRQDETLQN 164
+L L + W PL+V S V++ +W+ DIA F GR +S+
Sbjct: 117 WLEFFLTSIFSALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVSK------- 169
Query: 165 TEQKGRLPGLGGVMIVIGEQVYSMLLLSFFFVEVNAIGFLPY--IGKGFNFLLLSWMYAY 222
+I + ++++LL + F ++ + P +G+ + L +S +Y+
Sbjct: 170 ---------------IIADMLFNLLLQALFLIQGMFVSLFPIHLVGQLVSLLHMSLLYSL 214
Query: 223 YCFEYKWNFSEVGLDKRLDFFESNWAFFAGFGSPCVLAYFFFSPLVAYGVM-AILYPL 279
YCFEY+W + + +RL E NW ++ GFG P S + G + +IL+PL
Sbjct: 215 YCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPL 272
>sp|O14681|EI24_HUMAN Etoposide-induced protein 2.4 homolog OS=Homo sapiens GN=EI24 PE=1
SV=4
Length = 340
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 35/238 (14%)
Query: 46 KLLIRTGQCFLLNGFIFLGSMFVLKSAVIPFLLWILPDQCSQIRSQELCLDSGIL-KFYS 104
+++ R QC NG +F S+ + IP L Q + + D + +S
Sbjct: 66 RIVSRIFQCCAWNGGVFWFSLLLFYRVFIPVL---------QSVTARIIGDPSLHGDVWS 116
Query: 105 FLRLALIQLLYIFWFYPLYVFSIVLSTLWYNDIAKYGFAAMGRSGQSSKELSRQDETLQN 164
+L L + W PL+V S V++ +W+ DIA F GR +S+
Sbjct: 117 WLEFFLTSIFSALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVSK------- 169
Query: 165 TEQKGRLPGLGGVMIVIGEQVYSMLLLSFFFVEVNAIGFLPY--IGKGFNFLLLSWMYAY 222
+I + ++++LL + F ++ + P +G+ + L +S +Y+
Sbjct: 170 ---------------IIADMLFNLLLQALFLIQGMFVSLFPIHLVGQLVSLLHMSLLYSL 214
Query: 223 YCFEYKWNFSEVGLDKRLDFFESNWAFFAGFGSPCVLAYFFFSPLVAYGVM-AILYPL 279
YCFEY+W + + +RL E NW ++ GFG P S + G + +IL+PL
Sbjct: 215 YCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPL 272
>sp|Q4KM77|EI24_RAT Etoposide-induced protein 2.4 homolog OS=Rattus norvegicus GN=Ei24
PE=2 SV=1
Length = 340
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 104/237 (43%), Gaps = 33/237 (13%)
Query: 46 KLLIRTGQCFLLNGFIFLGSMFVLKSAVIPFLLWILPDQCSQIRSQELCLDSGILKFYSF 105
+++ R QC NG +F S+ + IP L + ++ + S +S+
Sbjct: 66 RIVSRIFQCCAWNGGVFWFSLLLFYRVFIPVL--------QSVTARVIGDPSLHGDVWSW 117
Query: 106 LRLALIQLLYIFWFYPLYVFSIVLSTLWYNDIAKYGFAAMGRSGQSSKELSRQDETLQNT 165
L L + W PL+V S V++ +W+ DIA F GR +S+
Sbjct: 118 LEFFLTSIFSALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVSK-------- 169
Query: 166 EQKGRLPGLGGVMIVIGEQVYSMLLLSFFFVEVNAIGFLPY--IGKGFNFLLLSWMYAYY 223
+I + ++++LL + F ++ + P +G+ + L +S +Y+ Y
Sbjct: 170 --------------IIADMLFNLLLQALFLIQGMFVSLFPIHLVGQLVSLLHMSLLYSLY 215
Query: 224 CFEYKWNFSEVGLDKRLDFFESNWAFFAGFGSPCVLAYFFFSPLVAYGVM-AILYPL 279
CFEY+W + + +RL E NW ++ GFG P S + G + +IL+PL
Sbjct: 216 CFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPL 272
>sp|Q08DE5|EI24_BOVIN Etoposide-induced protein 2.4 homolog OS=Bos taurus GN=EI24 PE=2
SV=1
Length = 340
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 29/235 (12%)
Query: 46 KLLIRTGQCFLLNGFIFLGSMFVLKSAVIPFLLWILPDQCSQIRSQELCLDSGILKFYSF 105
+++ R QC NG +F S+ + IP L + +Q + S +S+
Sbjct: 66 RIVSRIFQCCAWNGGVFWFSLLLFYRVFIPVL--------QSVTAQIIGDPSLHGDVWSW 117
Query: 106 LRLALIQLLYIFWFYPLYVFSIVLSTLWYNDIAKYGFAAMGRSGQSSKELSRQDETLQNT 165
L L + W PL+V S V++ +W+ DIA F GR +S+ +
Sbjct: 118 LEFFLTSIFSALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVSKIIADMLFN 177
Query: 166 EQKGRLPGLGGVMIVIGEQVYSMLLLSFFFVEVNAIGFLPYIGKGFNFLLLSWMYAYYCF 225
L L G+ + S F + + +G+ + L +S +Y+ YCF
Sbjct: 178 LLLQALFLLQGMFV------------SLFPIHL--------VGQLVSLLHMSLLYSLYCF 217
Query: 226 EYKWNFSEVGLDKRLDFFESNWAFFAGFGSPCVLAYFFFSPLVAYGVM-AILYPL 279
EY+W + + +RL E NW ++ GFG P S + G + +IL+PL
Sbjct: 218 EYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIVSGCLFSILFPL 272
>sp|Q20123|EI24_CAEEL Ectopic P granules protein 4 OS=Caenorhabditis elegans GN=epg-4
PE=2 SV=1
Length = 315
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 25/161 (15%)
Query: 121 PLYVFSIVLSTLWYNDIAKYGFAAMGRSGQSSKELSRQDETLQNTEQKGRLPGLGGVMIV 180
P++ S ++ LW++DI+ A+ S L G +I
Sbjct: 120 PIFFASRIIQALWFSDISGACMRALKLPPPPVVPFSSM---------------LAGTLIS 164
Query: 181 IGEQVYSMLLLSFFFVEVNAIGFLPY--IGKGFNFLLLSWMYAYYCFEYKWNFSEVGLDK 238
Q+ FF ++ +LP I +L ++ + + YCF+Y ++ + +
Sbjct: 165 ALHQI-------FFLIQGMLSQYLPIPLITPVIVYLHMALLNSMYCFDYFFDGYNLSFLR 217
Query: 239 RLDFFESNWAFFAGFGSPCVLAYFFFSPLVAYGVM-AILYP 278
R D FES+W +F GFG+P LA S + V+ A+L+P
Sbjct: 218 RKDIFESHWPYFLGFGTPLALACSISSNMFVNSVIFALLFP 258
>sp|Q5UQ30|YL211_MIMIV Uncharacterized protein L211 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L211 PE=4 SV=1
Length = 262
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 213 FLLLSWMYAYYCFEYKWNFSEVGLDKRLDFFESNWAFFAGFGSPCVLAYFFFS-PLVAYG 271
F++L+ +++ CF W++ + + R+ E WA++ G+G+ L Y + + PL+ Y
Sbjct: 152 FIILTLYHSFCCFNNLWHYKNIDIHHRISLHEKLWAYYLGYGTIASLMYIYSNHPLMIYT 211
>sp|P23317|PSAK_ANAVT Photosystem I reaction center subunit PsaK OS=Anabaena variabilis
(strain ATCC 29413 / PCC 7937) GN=psaK PE=1 SV=2
Length = 86
Score = 32.0 bits (71), Expect = 6.2, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 249 FFAGFGSPCVLAYFFFSPLVAYGVMAILYPLGR 281
FF GFG+P +LA F ++ G++ L+ LGR
Sbjct: 53 FFGGFGAPALLATTAFGHILGVGIILGLHNLGR 85
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.146 0.463
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,204,103
Number of Sequences: 539616
Number of extensions: 4213928
Number of successful extensions: 10523
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 10503
Number of HSP's gapped (non-prelim): 13
length of query: 304
length of database: 191,569,459
effective HSP length: 117
effective length of query: 187
effective length of database: 128,434,387
effective search space: 24017230369
effective search space used: 24017230369
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 61 (28.1 bits)