Query 021975
Match_columns 304
No_of_seqs 301 out of 3152
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 12:07:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021975.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021975hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1p91_A Ribosomal RNA large sub 99.9 4.2E-21 1.4E-25 168.9 16.7 177 61-277 3-181 (269)
2 4e2x_A TCAB9; kijanose, tetron 99.8 2.2E-21 7.6E-26 181.4 9.6 116 154-276 95-210 (416)
3 4gek_A TRNA (CMO5U34)-methyltr 99.8 4.4E-20 1.5E-24 162.2 16.4 127 148-278 50-182 (261)
4 1vl5_A Unknown conserved prote 99.8 3.3E-20 1.1E-24 162.4 14.6 117 156-277 27-143 (260)
5 4hg2_A Methyltransferase type 99.8 1.9E-20 6.6E-25 164.1 12.5 113 151-277 26-138 (257)
6 2o57_A Putative sarcosine dime 99.8 2.1E-19 7.2E-24 160.3 17.9 121 154-278 66-191 (297)
7 3dlc_A Putative S-adenosyl-L-m 99.8 2.3E-19 7.8E-24 152.1 16.2 122 152-277 30-151 (219)
8 1nkv_A Hypothetical protein YJ 99.8 1.7E-19 5.8E-24 157.2 15.3 124 149-276 19-142 (256)
9 3bus_A REBM, methyltransferase 99.8 3.4E-19 1.2E-23 156.8 16.1 121 155-278 50-170 (273)
10 3jwh_A HEN1; methyltransferase 99.8 3.2E-19 1.1E-23 151.9 14.6 124 153-276 16-143 (217)
11 1xxl_A YCGJ protein; structura 99.8 5.9E-19 2E-23 152.7 16.4 117 156-277 11-127 (239)
12 3jwg_A HEN1, methyltransferase 99.8 3.6E-19 1.2E-23 151.7 14.8 123 154-276 17-143 (219)
13 3kkz_A Uncharacterized protein 99.8 5.4E-19 1.9E-23 155.3 15.7 124 149-276 28-152 (267)
14 3f4k_A Putative methyltransfer 99.8 7.2E-19 2.5E-23 153.3 15.8 124 149-276 28-152 (257)
15 3dh0_A SAM dependent methyltra 99.8 5.6E-19 1.9E-23 150.3 14.5 119 157-278 28-147 (219)
16 3mgg_A Methyltransferase; NYSG 99.8 7E-19 2.4E-23 155.2 14.4 119 156-277 27-145 (276)
17 1pjz_A Thiopurine S-methyltran 99.8 3.6E-19 1.2E-23 150.5 11.7 112 162-275 18-141 (203)
18 3dtn_A Putative methyltransfer 99.8 1.6E-18 5.6E-23 149.0 15.3 121 151-277 28-151 (234)
19 3ofk_A Nodulation protein S; N 99.8 1E-18 3.5E-23 148.5 13.5 114 156-277 41-157 (216)
20 3vc1_A Geranyl diphosphate 2-C 99.8 1.9E-18 6.5E-23 155.4 15.9 119 156-279 106-226 (312)
21 3g5t_A Trans-aconitate 3-methy 99.8 2.3E-18 7.7E-23 153.9 16.3 123 151-277 22-152 (299)
22 3l8d_A Methyltransferase; stru 99.8 1.9E-18 6.6E-23 149.1 15.3 115 154-278 43-157 (242)
23 3g5l_A Putative S-adenosylmeth 99.8 1.1E-18 3.7E-23 152.0 13.8 115 156-277 34-148 (253)
24 3ujc_A Phosphoethanolamine N-m 99.8 1E-18 3.6E-23 152.7 13.0 123 150-278 39-163 (266)
25 4htf_A S-adenosylmethionine-de 99.8 1.6E-18 5.3E-23 153.8 14.2 107 167-277 69-176 (285)
26 2p7i_A Hypothetical protein; p 99.8 1.3E-18 4.3E-23 150.4 13.2 103 165-277 41-144 (250)
27 3ege_A Putative methyltransfer 99.8 1.3E-18 4.3E-23 152.6 13.3 115 153-279 21-135 (261)
28 2gb4_A Thiopurine S-methyltran 99.8 2.7E-18 9.4E-23 150.0 15.3 121 154-276 56-193 (252)
29 2p35_A Trans-aconitate 2-methy 99.8 2.1E-18 7.1E-23 150.4 13.6 112 157-277 24-135 (259)
30 3h2b_A SAM-dependent methyltra 99.8 1.4E-18 4.9E-23 146.2 11.5 102 167-278 42-145 (203)
31 3gu3_A Methyltransferase; alph 99.8 4.5E-18 1.6E-22 151.0 15.3 115 157-276 12-128 (284)
32 3hem_A Cyclopropane-fatty-acyl 99.8 5.6E-18 1.9E-22 151.6 15.9 117 156-278 62-187 (302)
33 3hnr_A Probable methyltransfer 99.8 3.4E-18 1.2E-22 145.5 13.3 110 158-277 37-148 (220)
34 2yqz_A Hypothetical protein TT 99.8 6.1E-18 2.1E-22 147.6 15.0 104 164-273 37-140 (263)
35 2xvm_A Tellurite resistance pr 99.8 8.7E-18 3E-22 140.4 15.0 114 158-277 24-139 (199)
36 3lcc_A Putative methyl chlorid 99.8 3.9E-18 1.3E-22 146.9 13.2 106 167-277 67-174 (235)
37 2gs9_A Hypothetical protein TT 99.8 7.6E-18 2.6E-22 142.5 14.6 101 166-278 36-136 (211)
38 1kpg_A CFA synthase;, cyclopro 99.8 1E-17 3.5E-22 148.5 15.9 116 156-278 54-172 (287)
39 3ccf_A Cyclopropane-fatty-acyl 99.8 2.6E-18 9E-23 151.9 11.4 109 158-277 49-157 (279)
40 3sm3_A SAM-dependent methyltra 99.8 3.4E-18 1.1E-22 146.6 11.7 110 166-277 30-144 (235)
41 3thr_A Glycine N-methyltransfe 99.8 8.4E-18 2.9E-22 149.5 14.3 125 151-277 42-178 (293)
42 2p8j_A S-adenosylmethionine-de 99.8 9.3E-18 3.2E-22 141.6 13.6 108 165-278 22-132 (209)
43 3bkw_A MLL3908 protein, S-aden 99.8 1.2E-17 3.9E-22 144.2 14.0 114 156-276 33-146 (243)
44 3ou2_A SAM-dependent methyltra 99.7 1.3E-17 4.5E-22 141.3 13.7 110 158-277 37-149 (218)
45 1ve3_A Hypothetical protein PH 99.7 1.5E-17 5E-22 142.0 13.5 114 156-277 30-145 (227)
46 3fpf_A Mtnas, putative unchara 99.7 2.5E-17 8.7E-22 145.8 15.3 139 130-276 75-224 (298)
47 3i9f_A Putative type 11 methyl 99.7 4.3E-18 1.5E-22 139.1 9.6 105 161-278 12-116 (170)
48 2fk8_A Methoxy mycolic acid sy 99.7 2.8E-17 9.5E-22 148.0 15.6 116 156-278 80-198 (318)
49 2ex4_A Adrenal gland protein A 99.7 1.2E-17 4E-22 144.5 12.6 108 166-277 79-188 (241)
50 2pxx_A Uncharacterized protein 99.7 2.2E-17 7.6E-22 139.5 13.9 117 153-277 31-162 (215)
51 4fsd_A Arsenic methyltransfera 99.7 1.6E-17 5.5E-22 153.7 14.0 114 164-277 81-206 (383)
52 2aot_A HMT, histamine N-methyl 99.7 9.3E-18 3.2E-22 149.5 12.0 111 165-277 51-175 (292)
53 3bkx_A SAM-dependent methyltra 99.7 3.2E-17 1.1E-21 144.3 15.1 120 157-278 34-163 (275)
54 1xtp_A LMAJ004091AAA; SGPP, st 99.7 9.7E-18 3.3E-22 145.7 11.6 114 158-277 85-200 (254)
55 3e05_A Precorrin-6Y C5,15-meth 99.7 1.3E-16 4.3E-21 134.5 17.8 121 150-276 24-144 (204)
56 1y8c_A S-adenosylmethionine-de 99.7 1.5E-17 5.1E-22 143.5 12.3 118 153-277 22-145 (246)
57 3dli_A Methyltransferase; PSI- 99.7 8.8E-18 3E-22 145.2 10.4 112 153-277 27-143 (240)
58 3ocj_A Putative exported prote 99.7 2E-17 6.8E-22 148.3 12.2 111 165-278 117-231 (305)
59 3m70_A Tellurite resistance pr 99.7 5E-17 1.7E-21 144.1 14.4 110 161-277 115-226 (286)
60 3pfg_A N-methyltransferase; N, 99.7 3.8E-17 1.3E-21 143.1 13.2 102 166-278 50-155 (263)
61 3hm2_A Precorrin-6Y C5,15-meth 99.7 5.9E-17 2E-21 133.1 13.0 119 152-277 11-130 (178)
62 2kw5_A SLR1183 protein; struct 99.7 9.2E-18 3.2E-22 141.0 8.2 104 166-278 30-135 (202)
63 3e23_A Uncharacterized protein 99.7 4.2E-17 1.4E-21 138.0 11.2 101 166-278 43-145 (211)
64 2avn_A Ubiquinone/menaquinone 99.7 9.7E-17 3.3E-21 140.4 13.5 109 156-277 46-155 (260)
65 3g2m_A PCZA361.24; SAM-depende 99.7 6.8E-17 2.3E-21 144.3 12.6 122 153-278 70-194 (299)
66 1ri5_A MRNA capping enzyme; me 99.7 1.1E-16 3.8E-21 142.1 13.7 110 165-277 63-177 (298)
67 3njr_A Precorrin-6Y methylase; 99.7 5.6E-16 1.9E-20 130.9 17.2 118 151-277 40-157 (204)
68 2vdw_A Vaccinia virus capping 99.7 7.4E-17 2.5E-21 144.5 12.3 111 166-277 48-172 (302)
69 3g07_A 7SK snRNA methylphospha 99.7 4.3E-17 1.5E-21 145.3 10.5 109 166-274 46-220 (292)
70 3p9n_A Possible methyltransfer 99.7 1.2E-16 3.9E-21 133.2 12.4 123 152-278 27-157 (189)
71 3htx_A HEN1; HEN1, small RNA m 99.7 2E-16 6.7E-21 155.3 15.6 124 153-277 708-837 (950)
72 2qe6_A Uncharacterized protein 99.7 3.9E-16 1.3E-20 137.9 16.0 107 166-277 77-199 (274)
73 3cc8_A Putative methyltransfer 99.7 1.6E-16 5.3E-21 135.6 12.4 107 158-277 25-133 (230)
74 3orh_A Guanidinoacetate N-meth 99.7 3.9E-17 1.3E-21 141.2 8.5 105 165-274 59-170 (236)
75 3d2l_A SAM-dependent methyltra 99.7 2.5E-16 8.6E-21 135.7 13.2 113 154-276 23-139 (243)
76 1zx0_A Guanidinoacetate N-meth 99.7 4.8E-17 1.7E-21 140.3 8.5 107 165-276 59-172 (236)
77 1dus_A MJ0882; hypothetical pr 99.7 5.7E-16 1.9E-20 128.4 14.6 119 153-277 39-160 (194)
78 3mti_A RRNA methylase; SAM-dep 99.7 2E-16 6.7E-21 131.1 11.4 108 165-277 21-138 (185)
79 3gwz_A MMCR; methyltransferase 99.7 8.9E-16 3E-20 141.3 17.0 117 158-279 194-312 (369)
80 3ggd_A SAM-dependent methyltra 99.7 1.1E-16 3.8E-21 138.5 10.3 105 165-277 55-166 (245)
81 2a14_A Indolethylamine N-methy 99.7 8.5E-17 2.9E-21 141.2 9.6 113 164-277 53-200 (263)
82 3dp7_A SAM-dependent methyltra 99.7 7E-16 2.4E-20 141.7 15.8 110 165-278 178-291 (363)
83 3bxo_A N,N-dimethyltransferase 99.7 2.7E-16 9.1E-21 135.2 12.3 103 165-278 39-145 (239)
84 3lbf_A Protein-L-isoaspartate 99.7 5.2E-16 1.8E-20 131.1 13.8 113 153-276 64-176 (210)
85 3i53_A O-methyltransferase; CO 99.7 4.3E-16 1.5E-20 141.2 13.9 110 165-279 168-279 (332)
86 1vlm_A SAM-dependent methyltra 99.7 3.7E-16 1.3E-20 133.2 12.6 95 167-277 48-142 (219)
87 1x19_A CRTF-related protein; m 99.7 1.1E-15 3.7E-20 140.1 16.2 119 156-279 180-300 (359)
88 1yzh_A TRNA (guanine-N(7)-)-me 99.7 9.6E-16 3.3E-20 130.2 14.7 107 166-275 41-157 (214)
89 3e8s_A Putative SAM dependent 99.7 2.1E-16 7.1E-21 134.5 10.5 110 157-278 43-156 (227)
90 2r3s_A Uncharacterized protein 99.7 7.9E-16 2.7E-20 139.3 14.6 118 157-278 154-275 (335)
91 1wzn_A SAM-dependent methyltra 99.7 1.2E-15 4.1E-20 132.4 14.6 106 164-276 39-147 (252)
92 2fca_A TRNA (guanine-N(7)-)-me 99.7 5.4E-16 1.8E-20 131.9 12.0 107 166-275 38-154 (213)
93 3dxy_A TRNA (guanine-N(7)-)-me 99.7 2.4E-16 8.2E-21 134.7 9.8 108 166-276 34-152 (218)
94 1qzz_A RDMB, aclacinomycin-10- 99.7 1.1E-15 3.7E-20 140.6 14.9 113 158-275 174-288 (374)
95 3cgg_A SAM-dependent methyltra 99.7 1.1E-15 3.8E-20 126.8 13.5 110 156-277 38-150 (195)
96 3bgv_A MRNA CAP guanine-N7 met 99.7 7.6E-16 2.6E-20 138.4 13.3 111 166-277 34-158 (313)
97 3mb5_A SAM-dependent methyltra 99.7 1.9E-15 6.4E-20 131.6 14.9 121 149-277 76-197 (255)
98 3ckk_A TRNA (guanine-N(7)-)-me 99.6 8.8E-16 3E-20 132.6 12.3 112 165-276 45-170 (235)
99 2g72_A Phenylethanolamine N-me 99.6 2.6E-16 8.9E-21 139.8 9.1 120 156-276 59-217 (289)
100 2fyt_A Protein arginine N-meth 99.6 1.6E-15 5.5E-20 138.0 14.5 112 156-271 54-168 (340)
101 3mcz_A O-methyltransferase; ad 99.6 1.3E-15 4.5E-20 139.0 14.0 118 158-278 170-291 (352)
102 2pwy_A TRNA (adenine-N(1)-)-me 99.6 3.1E-15 1.1E-19 130.2 15.4 121 149-277 79-201 (258)
103 3uwp_A Histone-lysine N-methyl 99.6 7.8E-16 2.7E-20 141.3 11.8 125 153-279 160-293 (438)
104 2ip2_A Probable phenazine-spec 99.6 1.5E-15 5.2E-20 137.6 13.6 117 156-278 158-276 (334)
105 3eey_A Putative rRNA methylase 99.6 8E-16 2.7E-20 128.7 10.8 111 165-277 21-142 (197)
106 3mq2_A 16S rRNA methyltransfer 99.6 6.3E-16 2.2E-20 131.5 10.4 110 162-275 23-141 (218)
107 3iv6_A Putative Zn-dependent a 99.6 1.7E-15 5.9E-20 132.5 13.3 111 154-276 33-150 (261)
108 3q7e_A Protein arginine N-meth 99.6 1.9E-15 6.3E-20 138.1 14.0 107 163-273 63-172 (349)
109 1yb2_A Hypothetical protein TA 99.6 1.6E-15 5.6E-20 133.9 12.9 113 156-277 100-214 (275)
110 3fzg_A 16S rRNA methylase; met 99.6 1.5E-16 5.2E-21 131.2 5.5 119 149-274 34-152 (200)
111 2ift_A Putative methylase HI07 99.6 7.1E-16 2.4E-20 130.0 9.8 121 154-278 40-167 (201)
112 1xdz_A Methyltransferase GIDB; 99.6 2E-15 6.7E-20 130.6 12.9 103 165-274 69-174 (240)
113 1tw3_A COMT, carminomycin 4-O- 99.6 3E-15 1E-19 137.0 14.2 114 158-276 175-290 (360)
114 2i62_A Nicotinamide N-methyltr 99.6 5.6E-16 1.9E-20 135.2 8.9 112 165-277 55-201 (265)
115 1fbn_A MJ fibrillarin homologu 99.6 3.1E-15 1.1E-19 128.5 13.1 101 162-273 70-177 (230)
116 1l3i_A Precorrin-6Y methyltran 99.6 2.6E-15 8.9E-20 124.2 12.0 119 151-277 18-137 (192)
117 4df3_A Fibrillarin-like rRNA/T 99.6 6E-15 2E-19 126.6 14.4 118 153-277 61-185 (233)
118 3dmg_A Probable ribosomal RNA 99.6 3.4E-15 1.2E-19 137.7 13.8 107 165-277 232-343 (381)
119 4dcm_A Ribosomal RNA large sub 99.6 4.3E-15 1.5E-19 136.9 14.4 125 152-277 208-337 (375)
120 2esr_A Methyltransferase; stru 99.6 8.1E-16 2.8E-20 126.4 8.2 121 154-278 18-142 (177)
121 2yxd_A Probable cobalt-precorr 99.6 7.2E-15 2.5E-19 120.7 13.9 116 150-277 19-134 (183)
122 2fpo_A Methylase YHHF; structu 99.6 3E-15 1E-19 126.2 11.8 121 152-277 39-163 (202)
123 1nt2_A Fibrillarin-like PRE-rR 99.6 5.2E-15 1.8E-19 125.6 13.3 105 164-276 55-163 (210)
124 2yxe_A Protein-L-isoaspartate 99.6 5.3E-15 1.8E-19 125.4 13.2 115 154-277 65-180 (215)
125 1dl5_A Protein-L-isoaspartate 99.6 3.9E-15 1.3E-19 134.2 12.9 115 153-276 62-177 (317)
126 2fhp_A Methylase, putative; al 99.6 2.3E-15 8E-20 124.4 10.6 126 149-278 26-158 (187)
127 1vbf_A 231AA long hypothetical 99.6 5.8E-15 2E-19 126.5 13.4 112 153-277 57-168 (231)
128 1i9g_A Hypothetical protein RV 99.6 8E-15 2.7E-19 129.4 14.5 121 151-277 84-206 (280)
129 1ws6_A Methyltransferase; stru 99.6 9.4E-16 3.2E-20 124.9 7.8 120 151-278 24-151 (171)
130 3ntv_A MW1564 protein; rossman 99.6 3.7E-15 1.3E-19 128.3 11.9 120 152-276 57-178 (232)
131 1jsx_A Glucose-inhibited divis 99.6 6.4E-15 2.2E-19 124.0 13.1 113 155-275 51-166 (207)
132 3u81_A Catechol O-methyltransf 99.6 1.8E-15 6.2E-20 129.1 9.7 122 153-277 45-173 (221)
133 3evz_A Methyltransferase; NYSG 99.6 1.5E-14 5.1E-19 123.9 15.4 108 165-277 54-182 (230)
134 3lst_A CALO1 methyltransferase 99.6 3.1E-15 1.1E-19 136.5 11.8 114 158-279 176-291 (348)
135 1g6q_1 HnRNP arginine N-methyl 99.6 9.2E-15 3.2E-19 132.4 14.4 111 158-272 30-143 (328)
136 3grz_A L11 mtase, ribosomal pr 99.6 5.7E-15 1.9E-19 124.3 12.1 104 165-277 59-162 (205)
137 3lpm_A Putative methyltransfer 99.6 4.3E-15 1.5E-19 130.0 11.3 116 157-275 39-177 (259)
138 1o54_A SAM-dependent O-methylt 99.6 1.2E-14 4.2E-19 128.2 14.2 118 151-276 97-215 (277)
139 3gdh_A Trimethylguanosine synt 99.6 1.1E-16 3.8E-21 138.3 0.9 116 154-274 65-181 (241)
140 3m33_A Uncharacterized protein 99.6 3.5E-15 1.2E-19 127.8 10.2 91 165-271 47-139 (226)
141 3r0q_C Probable protein argini 99.6 5.5E-15 1.9E-19 136.3 12.2 115 157-276 54-171 (376)
142 2vdv_E TRNA (guanine-N(7)-)-me 99.6 9.2E-15 3.2E-19 126.9 13.0 102 166-275 49-174 (246)
143 2gpy_A O-methyltransferase; st 99.6 1.3E-14 4.6E-19 124.6 13.4 120 152-276 40-162 (233)
144 2pjd_A Ribosomal RNA small sub 99.6 3.3E-15 1.1E-19 136.1 10.0 120 152-277 182-306 (343)
145 3tfw_A Putative O-methyltransf 99.6 9.4E-15 3.2E-19 127.1 12.2 121 152-277 49-173 (248)
146 2ozv_A Hypothetical protein AT 99.6 1.1E-14 3.7E-19 127.6 12.7 118 157-276 27-172 (260)
147 1o9g_A RRNA methyltransferase; 99.6 3.6E-15 1.2E-19 129.7 9.3 118 158-277 43-217 (250)
148 1fp1_D Isoliquiritigenin 2'-O- 99.6 6.8E-15 2.3E-19 135.5 11.5 101 165-278 208-310 (372)
149 2b3t_A Protein methyltransfera 99.6 2E-14 6.9E-19 126.8 13.9 119 152-275 96-239 (276)
150 3q87_B N6 adenine specific DNA 99.6 1.2E-14 4.3E-19 119.0 11.6 105 156-277 11-126 (170)
151 3g89_A Ribosomal RNA small sub 99.6 7.1E-15 2.4E-19 128.0 10.4 104 165-275 79-185 (249)
152 4dzr_A Protein-(glutamine-N5) 99.6 5.6E-16 1.9E-20 130.7 3.3 116 155-275 18-165 (215)
153 1jg1_A PIMT;, protein-L-isoasp 99.6 1.4E-14 4.8E-19 124.7 12.1 114 153-277 78-192 (235)
154 1af7_A Chemotaxis receptor met 99.6 1.1E-14 3.7E-19 128.4 11.5 109 166-274 105-252 (274)
155 2y1w_A Histone-arginine methyl 99.6 1.4E-14 4.8E-19 132.2 12.6 114 156-274 40-155 (348)
156 3dr5_A Putative O-methyltransf 99.6 1.3E-14 4.4E-19 124.2 11.4 105 167-276 57-165 (221)
157 3reo_A (ISO)eugenol O-methyltr 99.6 1.7E-14 5.9E-19 132.6 13.0 102 164-278 201-304 (368)
158 2frn_A Hypothetical protein PH 99.6 1.9E-14 6.4E-19 127.4 12.7 112 156-277 117-228 (278)
159 1i1n_A Protein-L-isoaspartate 99.6 3.9E-14 1.3E-18 121.0 13.9 107 164-276 75-184 (226)
160 2yvl_A TRMI protein, hypotheti 99.6 6.9E-14 2.4E-18 120.9 15.5 116 152-276 77-192 (248)
161 1u2z_A Histone-lysine N-methyl 99.6 2E-14 7E-19 133.9 12.9 123 153-277 229-362 (433)
162 3giw_A Protein of unknown func 99.6 2.3E-14 7.8E-19 125.4 12.1 109 166-277 78-203 (277)
163 3p2e_A 16S rRNA methylase; met 99.6 4.4E-15 1.5E-19 127.4 7.3 107 165-274 23-139 (225)
164 3p9c_A Caffeic acid O-methyltr 99.6 3.1E-14 1.1E-18 130.8 13.4 102 164-278 199-302 (364)
165 1ej0_A FTSJ; methyltransferase 99.6 2.3E-14 7.8E-19 116.7 11.1 100 164-277 20-139 (180)
166 3duw_A OMT, O-methyltransferas 99.6 3.4E-14 1.2E-18 121.1 12.5 121 152-277 44-170 (223)
167 2pbf_A Protein-L-isoaspartate 99.6 3.6E-14 1.2E-18 121.3 12.6 107 164-276 78-195 (227)
168 3c3p_A Methyltransferase; NP_9 99.5 1.8E-14 6.3E-19 121.8 10.5 108 162-275 52-161 (210)
169 1fp2_A Isoflavone O-methyltran 99.5 1.7E-14 5.7E-19 131.8 10.4 101 165-278 187-292 (352)
170 4azs_A Methyltransferase WBDD; 99.5 9.3E-15 3.2E-19 141.8 9.1 107 166-277 66-176 (569)
171 2b25_A Hypothetical protein; s 99.5 8.2E-14 2.8E-18 126.4 14.7 122 151-277 90-222 (336)
172 2bm8_A Cephalosporin hydroxyla 99.5 1.5E-14 5.1E-19 125.0 9.3 109 156-275 71-188 (236)
173 3tr6_A O-methyltransferase; ce 99.5 1.5E-14 5.3E-19 123.3 9.2 120 153-277 51-177 (225)
174 1ixk_A Methyltransferase; open 99.5 2.9E-14 9.9E-19 128.4 11.3 119 156-277 108-249 (315)
175 3tma_A Methyltransferase; thum 99.5 7.2E-14 2.5E-18 127.7 14.1 126 149-277 186-320 (354)
176 3bzb_A Uncharacterized protein 99.5 9.1E-14 3.1E-18 123.1 14.0 119 153-274 66-205 (281)
177 2ipx_A RRNA 2'-O-methyltransfe 99.5 9.4E-14 3.2E-18 119.3 13.6 106 163-276 74-184 (233)
178 2zfu_A Nucleomethylin, cerebra 99.5 4E-14 1.4E-18 119.9 10.8 89 165-277 66-154 (215)
179 3ajd_A Putative methyltransfer 99.5 1.6E-14 5.6E-19 127.5 8.6 122 158-282 75-219 (274)
180 4a6d_A Hydroxyindole O-methylt 99.5 1.9E-13 6.5E-18 124.9 15.9 114 159-278 172-287 (353)
181 3r3h_A O-methyltransferase, SA 99.5 6.2E-15 2.1E-19 127.8 5.7 121 152-277 46-173 (242)
182 1sui_A Caffeoyl-COA O-methyltr 99.5 4.4E-14 1.5E-18 122.8 10.4 118 154-276 67-192 (247)
183 2plw_A Ribosomal RNA methyltra 99.5 3.9E-14 1.3E-18 118.6 9.7 100 164-277 20-157 (201)
184 3a27_A TYW2, uncharacterized p 99.5 9.7E-14 3.3E-18 122.4 12.7 106 164-277 117-222 (272)
185 1nv8_A HEMK protein; class I a 99.5 1.6E-13 5.3E-18 121.8 13.8 118 152-275 109-250 (284)
186 3b3j_A Histone-arginine methyl 99.5 8.8E-14 3E-18 132.0 12.8 113 156-273 148-262 (480)
187 1r18_A Protein-L-isoaspartate( 99.5 6.8E-14 2.3E-18 119.8 10.7 113 157-276 73-196 (227)
188 1g8a_A Fibrillarin-like PRE-rR 99.5 1.8E-13 6.2E-18 117.0 13.4 104 164-275 71-179 (227)
189 4hc4_A Protein arginine N-meth 99.5 1.5E-13 5E-18 126.1 13.4 103 165-272 82-187 (376)
190 2hnk_A SAM-dependent O-methylt 99.5 7.4E-14 2.5E-18 120.5 10.6 120 152-276 46-183 (239)
191 2nxc_A L11 mtase, ribosomal pr 99.5 6.3E-14 2.1E-18 122.3 9.6 103 165-277 119-221 (254)
192 3id6_C Fibrillarin-like rRNA/T 99.5 4.7E-13 1.6E-17 114.9 14.7 114 154-275 61-182 (232)
193 3cbg_A O-methyltransferase; cy 99.5 9E-14 3.1E-18 119.6 10.1 119 154-277 60-185 (232)
194 1zq9_A Probable dimethyladenos 99.5 3.6E-14 1.2E-18 126.0 7.7 114 152-271 14-144 (285)
195 2igt_A SAM dependent methyltra 99.5 5.8E-14 2E-18 127.2 9.2 119 155-277 141-275 (332)
196 1zg3_A Isoflavanone 4'-O-methy 99.5 8.6E-14 3E-18 127.4 10.3 100 166-278 193-297 (358)
197 2yxl_A PH0851 protein, 450AA l 99.5 2.7E-13 9.3E-18 127.8 13.6 120 156-278 249-393 (450)
198 2avd_A Catechol-O-methyltransf 99.5 1.3E-13 4.4E-18 117.9 10.0 119 153-276 56-181 (229)
199 3bwc_A Spermidine synthase; SA 99.5 1.1E-13 3.9E-18 123.9 9.1 112 165-276 94-212 (304)
200 1sqg_A SUN protein, FMU protei 99.5 2.5E-13 8.6E-18 127.3 11.1 121 154-278 234-378 (429)
201 3lec_A NADB-rossmann superfami 99.4 4.8E-13 1.6E-17 114.4 11.3 118 154-277 11-128 (230)
202 2ld4_A Anamorsin; methyltransf 99.4 5E-14 1.7E-18 115.7 5.0 91 163-276 9-103 (176)
203 3sso_A Methyltransferase; macr 99.4 6.9E-14 2.3E-18 128.1 6.4 110 154-277 205-327 (419)
204 3c3y_A Pfomt, O-methyltransfer 99.4 2.7E-13 9.1E-18 117.1 9.8 118 154-276 58-183 (237)
205 3hp7_A Hemolysin, putative; st 99.4 2.7E-13 9.1E-18 120.0 9.4 107 156-274 75-185 (291)
206 3gnl_A Uncharacterized protein 99.4 5.5E-13 1.9E-17 114.9 10.8 117 155-277 12-128 (244)
207 3gjy_A Spermidine synthase; AP 99.4 6.6E-13 2.2E-17 118.8 11.7 107 167-276 90-202 (317)
208 2h00_A Methyltransferase 10 do 99.4 2.5E-13 8.5E-18 118.2 8.7 105 166-272 65-190 (254)
209 3adn_A Spermidine synthase; am 99.4 4.5E-13 1.5E-17 119.3 10.4 110 166-275 83-199 (294)
210 2nyu_A Putative ribosomal RNA 99.4 4.3E-13 1.5E-17 111.7 9.6 100 164-277 20-148 (196)
211 3kr9_A SAM-dependent methyltra 99.4 6.9E-13 2.4E-17 113.2 10.8 114 156-276 7-121 (225)
212 2qm3_A Predicted methyltransfe 99.4 1.9E-12 6.6E-17 119.1 14.6 105 166-275 172-279 (373)
213 3opn_A Putative hemolysin; str 99.4 5.9E-14 2E-18 120.9 3.4 109 157-274 28-137 (232)
214 3tm4_A TRNA (guanine N2-)-meth 99.4 1.8E-12 6.1E-17 119.4 12.8 120 151-275 203-330 (373)
215 2frx_A Hypothetical protein YE 99.4 1.7E-12 5.9E-17 122.9 12.7 119 158-279 107-251 (479)
216 3dou_A Ribosomal RNA large sub 99.4 1.1E-12 3.7E-17 109.6 9.9 107 155-277 14-142 (191)
217 1uir_A Polyamine aminopropyltr 99.4 9E-13 3.1E-17 118.5 9.2 110 166-275 77-196 (314)
218 1ne2_A Hypothetical protein TA 99.4 3.8E-12 1.3E-16 106.5 12.4 96 164-274 49-146 (200)
219 1xj5_A Spermidine synthase 1; 99.4 1.1E-12 3.7E-17 118.8 9.6 109 165-274 119-235 (334)
220 3m6w_A RRNA methylase; rRNA me 99.4 5.5E-13 1.9E-17 125.4 7.8 119 157-279 92-234 (464)
221 2oxt_A Nucleoside-2'-O-methylt 99.4 3E-13 1E-17 118.7 5.5 104 164-276 72-187 (265)
222 2o07_A Spermidine synthase; st 99.4 1.1E-12 3.6E-17 117.5 9.0 111 165-276 94-211 (304)
223 2wa2_A Non-structural protein 99.4 2.5E-13 8.5E-18 119.9 4.5 104 164-276 80-195 (276)
224 2f8l_A Hypothetical protein LM 99.4 3.4E-12 1.2E-16 116.2 12.0 125 148-277 108-259 (344)
225 1inl_A Spermidine synthase; be 99.4 2.8E-12 9.6E-17 114.3 11.1 110 166-276 90-207 (296)
226 3k6r_A Putative transferase PH 99.4 3.4E-12 1.2E-16 112.4 11.2 111 157-277 118-228 (278)
227 1wy7_A Hypothetical protein PH 99.4 1.7E-11 5.9E-16 102.9 15.1 100 164-273 47-148 (207)
228 3c0k_A UPF0064 protein YCCW; P 99.4 2.6E-12 9E-17 119.1 10.7 111 165-278 219-343 (396)
229 2b2c_A Spermidine synthase; be 99.3 9.6E-13 3.3E-17 118.2 7.3 107 166-274 108-222 (314)
230 2i7c_A Spermidine synthase; tr 99.3 1.7E-12 5.8E-17 115.0 8.7 112 165-276 77-194 (283)
231 1iy9_A Spermidine synthase; ro 99.3 2.6E-12 8.8E-17 113.4 9.6 110 166-276 75-191 (275)
232 2pt6_A Spermidine synthase; tr 99.3 2.3E-12 7.8E-17 116.2 8.6 109 166-276 116-232 (321)
233 2as0_A Hypothetical protein PH 99.3 2.3E-12 7.8E-17 119.6 8.8 110 166-278 217-339 (396)
234 2b78_A Hypothetical protein SM 99.3 1.8E-12 6.3E-17 119.7 8.2 111 165-278 211-335 (385)
235 1qam_A ERMC' methyltransferase 99.3 1.4E-12 4.7E-17 113.2 6.0 115 151-272 15-144 (244)
236 3frh_A 16S rRNA methylase; met 99.3 6.6E-12 2.3E-16 107.2 10.0 102 165-274 104-206 (253)
237 2cmg_A Spermidine synthase; tr 99.3 3.9E-12 1.3E-16 111.4 8.6 99 166-275 72-172 (262)
238 1wxx_A TT1595, hypothetical pr 99.3 2.2E-12 7.6E-17 119.1 7.4 108 166-278 209-329 (382)
239 3v97_A Ribosomal RNA large sub 99.3 7.4E-12 2.5E-16 123.9 11.4 109 166-277 539-660 (703)
240 3lcv_B Sisomicin-gentamicin re 99.3 3.4E-12 1.2E-16 110.0 7.7 104 166-275 132-237 (281)
241 1mjf_A Spermidine synthase; sp 99.3 3.9E-12 1.3E-16 112.6 8.2 107 165-275 74-194 (281)
242 3m4x_A NOL1/NOP2/SUN family pr 99.3 1.8E-12 6.1E-17 121.8 5.7 120 157-279 96-239 (456)
243 4dmg_A Putative uncharacterize 99.3 6.5E-12 2.2E-16 116.1 9.2 108 166-279 214-331 (393)
244 2yx1_A Hypothetical protein MJ 99.3 2.1E-11 7.3E-16 110.6 12.1 101 166-278 195-295 (336)
245 2okc_A Type I restriction enzy 99.3 1.8E-11 6.1E-16 115.2 10.9 129 147-277 152-310 (445)
246 2h1r_A Dimethyladenosine trans 99.2 1.3E-11 4.3E-16 110.3 8.3 109 152-268 28-153 (299)
247 1yub_A Ermam, rRNA methyltrans 99.2 6E-14 2E-18 121.8 -6.6 114 154-275 17-146 (245)
248 1uwv_A 23S rRNA (uracil-5-)-me 99.2 9.9E-11 3.4E-15 109.8 14.2 112 154-274 274-389 (433)
249 2p41_A Type II methyltransfera 99.2 4.3E-12 1.5E-16 113.6 4.5 103 165-277 81-194 (305)
250 2jjq_A Uncharacterized RNA met 99.2 2.3E-10 7.8E-15 106.9 15.0 100 164-274 288-387 (425)
251 3gru_A Dimethyladenosine trans 99.2 1.2E-10 4.2E-15 103.4 11.0 90 151-247 35-124 (295)
252 2ih2_A Modification methylase 99.2 6.2E-11 2.1E-15 110.4 9.4 119 146-277 19-167 (421)
253 3k0b_A Predicted N6-adenine-sp 99.2 1.6E-10 5.6E-15 106.8 11.8 126 149-277 184-353 (393)
254 3ldu_A Putative methylase; str 99.2 1.5E-10 5E-15 106.9 11.2 126 149-277 178-347 (385)
255 3ldg_A Putative uncharacterize 99.1 3.1E-10 1.1E-14 104.5 13.0 126 149-277 177-346 (384)
256 2b9e_A NOL1/NOP2/SUN domain fa 99.1 4E-10 1.4E-14 100.9 13.1 117 158-278 94-238 (309)
257 3bt7_A TRNA (uracil-5-)-methyl 99.1 1.3E-10 4.3E-15 106.8 7.7 112 154-277 202-329 (369)
258 2xyq_A Putative 2'-O-methyl tr 99.0 4.2E-10 1.5E-14 99.6 8.8 96 163-277 60-174 (290)
259 3tqs_A Ribosomal RNA small sub 99.0 7.6E-10 2.6E-14 96.4 10.2 85 152-244 15-103 (255)
260 2ar0_A M.ecoki, type I restric 99.0 8E-10 2.7E-14 106.3 10.7 130 146-277 149-315 (541)
261 2qfm_A Spermine synthase; sper 99.0 5.9E-10 2E-14 101.0 8.1 111 166-277 188-317 (364)
262 2dul_A N(2),N(2)-dimethylguano 99.0 8.4E-10 2.9E-14 101.5 9.0 102 166-274 47-164 (378)
263 3fut_A Dimethyladenosine trans 99.0 1.3E-09 4.3E-14 95.7 8.9 86 152-246 33-119 (271)
264 3axs_A Probable N(2),N(2)-dime 99.0 1.8E-09 6.2E-14 99.4 10.0 104 165-274 51-158 (392)
265 1m6y_A S-adenosyl-methyltransf 99.0 8.2E-10 2.8E-14 98.4 7.4 86 156-245 16-106 (301)
266 3cvo_A Methyltransferase-like 98.9 1.8E-08 6.2E-13 84.2 14.3 112 154-277 20-157 (202)
267 2r6z_A UPF0341 protein in RSP 98.9 1.1E-09 3.9E-14 95.4 6.8 114 158-277 75-219 (258)
268 3lkd_A Type I restriction-modi 98.9 2.2E-08 7.6E-13 96.0 15.1 148 129-277 175-361 (542)
269 3khk_A Type I restriction-modi 98.9 3.4E-09 1.2E-13 101.8 9.5 146 129-277 203-398 (544)
270 3v97_A Ribosomal RNA large sub 98.9 8.2E-09 2.8E-13 102.2 11.8 127 149-277 173-350 (703)
271 4gqb_A Protein arginine N-meth 98.8 6.9E-09 2.3E-13 100.6 9.5 100 167-271 358-464 (637)
272 3uzu_A Ribosomal RNA small sub 98.8 8.3E-09 2.8E-13 90.9 8.5 77 152-235 28-106 (279)
273 3ftd_A Dimethyladenosine trans 98.8 2.6E-08 9E-13 86.3 11.4 76 152-235 17-92 (249)
274 3evf_A RNA-directed RNA polyme 98.8 2.1E-08 7.2E-13 86.9 10.0 118 154-278 63-188 (277)
275 3o4f_A Spermidine synthase; am 98.7 1.2E-07 4E-12 83.7 12.6 110 165-275 82-199 (294)
276 1qyr_A KSGA, high level kasuga 98.7 9.3E-09 3.2E-13 89.3 4.8 86 153-245 8-98 (252)
277 3ll7_A Putative methyltransfer 98.7 1.1E-08 3.9E-13 94.4 5.1 74 166-244 93-170 (410)
278 3b5i_A S-adenosyl-L-methionine 98.6 9E-08 3.1E-12 87.5 9.8 113 167-279 53-230 (374)
279 2oyr_A UPF0341 protein YHIQ; a 98.6 2.6E-08 9E-13 86.6 5.7 91 157-249 77-176 (258)
280 3ua3_A Protein arginine N-meth 98.6 4.8E-08 1.6E-12 94.9 7.6 101 167-271 410-531 (745)
281 3s1s_A Restriction endonucleas 98.6 3E-07 1E-11 90.6 12.6 133 146-278 295-469 (878)
282 2efj_A 3,7-dimethylxanthine me 98.6 8.1E-08 2.8E-12 87.9 7.8 109 167-280 53-231 (384)
283 3gcz_A Polyprotein; flavivirus 98.5 2.2E-08 7.5E-13 86.9 2.6 119 153-278 78-205 (282)
284 4fzv_A Putative methyltransfer 98.5 2.5E-07 8.6E-12 84.1 9.3 130 158-287 140-297 (359)
285 2qy6_A UPF0209 protein YFCK; s 98.5 1.8E-07 6.2E-12 81.3 6.3 107 166-272 60-211 (257)
286 2jny_A Uncharacterized BCR; st 98.4 7.1E-08 2.4E-12 65.3 2.5 47 56-111 6-52 (67)
287 2jr6_A UPF0434 protein NMA0874 98.4 9.5E-08 3.3E-12 65.0 2.6 46 56-110 4-49 (68)
288 2js4_A UPF0434 protein BB2007; 98.4 1E-07 3.5E-12 65.2 2.5 47 56-111 4-50 (70)
289 2hf1_A Tetraacyldisaccharide-1 98.4 9.2E-08 3.1E-12 65.0 2.0 46 56-110 4-49 (68)
290 2pk7_A Uncharacterized protein 98.4 1.1E-07 3.8E-12 64.9 2.2 46 56-110 4-49 (69)
291 3ufb_A Type I restriction-modi 98.4 4.2E-06 1.4E-10 80.1 14.1 146 129-277 176-365 (530)
292 2wk1_A NOVP; transferase, O-me 98.4 8.5E-07 2.9E-11 77.9 8.5 109 165-276 105-246 (282)
293 1m6e_X S-adenosyl-L-methionnin 98.4 3E-07 1E-11 83.5 5.5 111 167-279 52-214 (359)
294 4auk_A Ribosomal RNA large sub 98.3 2.8E-06 9.5E-11 77.0 11.2 87 165-267 210-296 (375)
295 3eld_A Methyltransferase; flav 98.3 2.9E-06 9.9E-11 74.1 9.8 119 153-278 69-195 (300)
296 2kpi_A Uncharacterized protein 98.3 5.3E-07 1.8E-11 58.9 3.1 45 55-110 5-51 (56)
297 1wg8_A Predicted S-adenosylmet 98.2 2.7E-06 9.2E-11 74.2 8.0 79 156-243 12-95 (285)
298 3c6k_A Spermine synthase; sper 98.1 4.5E-06 1.5E-10 75.9 7.9 108 166-274 205-331 (381)
299 2k4m_A TR8_protein, UPF0146 pr 98.1 1.9E-05 6.4E-10 61.9 10.0 87 167-279 36-126 (153)
300 2k5r_A Uncharacterized protein 98.1 1.1E-06 3.7E-11 63.7 2.4 55 56-110 4-76 (97)
301 2px2_A Genome polyprotein [con 98.0 1.3E-05 4.3E-10 68.6 7.0 111 155-277 63-186 (269)
302 3lkz_A Non-structural protein 98.0 5.6E-05 1.9E-09 65.8 11.1 118 154-279 83-209 (321)
303 2zig_A TTHA0409, putative modi 97.9 3.1E-05 1.1E-09 68.5 9.3 61 150-213 220-280 (297)
304 3p8z_A Mtase, non-structural p 97.9 7.3E-05 2.5E-09 63.1 10.3 117 154-279 67-191 (267)
305 3tka_A Ribosomal RNA small sub 97.6 6.3E-05 2.2E-09 67.1 5.2 83 156-245 47-136 (347)
306 1g60_A Adenine-specific methyl 97.4 0.00045 1.5E-08 59.8 8.7 63 149-214 196-258 (260)
307 2vz8_A Fatty acid synthase; tr 97.4 3.1E-05 1.1E-09 86.1 1.5 104 166-275 1240-1349(2512)
308 1rjd_A PPM1P, carboxy methyl t 97.3 0.0028 9.4E-08 56.9 13.0 120 157-278 88-236 (334)
309 1i4w_A Mitochondrial replicati 97.3 0.00081 2.8E-08 60.8 9.4 75 151-231 37-117 (353)
310 3r24_A NSP16, 2'-O-methyl tran 97.3 0.00088 3E-08 58.3 8.7 99 163-279 106-222 (344)
311 1pft_A TFIIB, PFTFIIBN; N-term 96.7 0.0012 4E-08 41.9 3.1 33 58-99 3-36 (50)
312 2oo3_A Protein involved in cat 96.5 0.0017 5.7E-08 56.6 4.0 106 166-278 91-202 (283)
313 2uyo_A Hypothetical protein ML 96.5 0.053 1.8E-06 48.0 13.8 108 167-277 103-221 (310)
314 1kol_A Formaldehyde dehydrogen 96.3 0.033 1.1E-06 50.8 11.6 104 162-275 181-301 (398)
315 2dph_A Formaldehyde dismutase; 96.2 0.016 5.5E-07 53.0 8.7 105 161-275 180-300 (398)
316 2py6_A Methyltransferase FKBM; 96.2 0.014 4.9E-07 53.7 8.3 62 165-228 225-291 (409)
317 1f8f_A Benzyl alcohol dehydrog 95.7 0.053 1.8E-06 49.0 10.1 101 161-276 185-291 (371)
318 3g7u_A Cytosine-specific methy 95.6 0.051 1.8E-06 49.4 9.4 70 168-246 3-80 (376)
319 3tos_A CALS11; methyltransfera 95.6 0.046 1.6E-06 47.0 8.5 107 167-276 70-219 (257)
320 1boo_A Protein (N-4 cytosine-s 95.5 0.031 1.1E-06 49.7 7.4 63 149-214 236-298 (323)
321 1pqw_A Polyketide synthase; ro 95.5 0.045 1.5E-06 44.6 7.8 94 162-275 34-138 (198)
322 3two_A Mannitol dehydrogenase; 95.5 0.055 1.9E-06 48.4 9.0 94 163-276 173-267 (348)
323 1eg2_A Modification methylase 95.4 0.044 1.5E-06 48.7 8.0 62 149-213 226-290 (319)
324 3q87_A Putative uncharacterize 95.3 0.005 1.7E-07 46.6 1.3 29 81-109 93-121 (125)
325 1pl8_A Human sorbitol dehydrog 95.1 0.11 3.9E-06 46.5 9.9 99 162-275 167-274 (356)
326 1g55_A DNA cytosine methyltran 95.1 0.017 5.7E-07 52.0 4.2 71 168-246 3-77 (343)
327 1e3j_A NADP(H)-dependent ketos 95.0 0.23 7.9E-06 44.3 11.8 98 162-275 164-272 (352)
328 1v3u_A Leukotriene B4 12- hydr 95.0 0.12 4E-06 45.8 9.5 94 162-275 141-245 (333)
329 4ej6_A Putative zinc-binding d 94.8 0.17 5.9E-06 45.6 10.3 101 161-276 177-286 (370)
330 3uog_A Alcohol dehydrogenase; 94.7 0.091 3.1E-06 47.3 8.2 100 161-277 184-290 (363)
331 3s2e_A Zinc-containing alcohol 94.7 0.08 2.7E-06 47.1 7.7 98 162-275 162-264 (340)
332 4dvj_A Putative zinc-dependent 94.6 0.19 6.5E-06 45.2 10.1 92 166-273 171-269 (363)
333 3fpc_A NADP-dependent alcohol 94.5 0.19 6.5E-06 44.9 9.7 102 160-276 160-268 (352)
334 1dl6_A Transcription factor II 94.5 0.023 7.9E-07 37.0 2.6 31 58-97 9-40 (58)
335 3m6i_A L-arabinitol 4-dehydrog 94.4 0.39 1.3E-05 42.9 11.7 102 161-276 174-285 (363)
336 3qv2_A 5-cytosine DNA methyltr 94.4 0.13 4.5E-06 45.7 8.4 102 167-277 10-132 (327)
337 3vyw_A MNMC2; tRNA wobble urid 94.4 0.086 2.9E-06 46.4 7.0 106 166-272 96-224 (308)
338 1uuf_A YAHK, zinc-type alcohol 94.4 0.08 2.7E-06 47.9 7.0 94 163-275 191-289 (369)
339 3goh_A Alcohol dehydrogenase, 94.2 0.066 2.2E-06 47.1 5.8 93 160-274 136-229 (315)
340 3jv7_A ADH-A; dehydrogenase, n 94.1 0.18 6E-06 44.9 8.6 98 163-276 168-272 (345)
341 2b5w_A Glucose dehydrogenase; 94.0 0.27 9.3E-06 43.9 9.7 90 168-276 174-275 (357)
342 1zkd_A DUF185; NESG, RPR58, st 93.9 0.3 1E-05 44.5 9.6 45 167-211 81-132 (387)
343 2jhf_A Alcohol dehydrogenase E 93.9 0.35 1.2E-05 43.5 10.2 99 162-275 187-294 (374)
344 1p0f_A NADP-dependent alcohol 93.9 0.28 9.4E-06 44.2 9.5 99 162-275 187-294 (373)
345 4b7c_A Probable oxidoreductase 93.8 0.25 8.7E-06 43.6 9.1 100 160-275 143-249 (336)
346 1cdo_A Alcohol dehydrogenase; 93.8 0.28 9.7E-06 44.1 9.5 99 162-275 188-295 (374)
347 3gms_A Putative NADPH:quinone 93.8 0.25 8.6E-06 43.8 9.0 99 160-276 138-245 (340)
348 2j3h_A NADP-dependent oxidored 93.8 0.26 8.9E-06 43.7 9.1 96 162-275 151-256 (345)
349 3j20_Y 30S ribosomal protein S 93.7 0.026 9.1E-07 35.5 1.6 35 54-97 13-47 (50)
350 1vq8_Z 50S ribosomal protein L 93.7 0.021 7E-07 40.1 1.2 30 59-97 26-55 (83)
351 3ip1_A Alcohol dehydrogenase, 93.6 0.63 2.2E-05 42.3 11.5 100 163-276 210-320 (404)
352 3uko_A Alcohol dehydrogenase c 93.6 0.22 7.6E-06 44.9 8.4 101 161-276 188-297 (378)
353 1rjw_A ADH-HT, alcohol dehydro 93.5 0.35 1.2E-05 42.9 9.4 95 163-275 161-262 (339)
354 1e3i_A Alcohol dehydrogenase, 93.4 0.36 1.2E-05 43.4 9.5 99 162-275 191-298 (376)
355 2fzw_A Alcohol dehydrogenase c 93.3 0.32 1.1E-05 43.7 9.0 99 162-275 186-293 (373)
356 2c7p_A Modification methylase 93.2 0.24 8.1E-06 44.1 7.7 68 167-245 11-79 (327)
357 3qwb_A Probable quinone oxidor 93.2 0.38 1.3E-05 42.5 9.1 97 163-276 145-249 (334)
358 2hcy_A Alcohol dehydrogenase 1 93.2 0.18 6.3E-06 44.9 7.0 95 163-275 166-270 (347)
359 2akl_A PHNA-like protein PA012 93.1 0.054 1.8E-06 40.8 2.7 35 54-98 21-55 (138)
360 1yb5_A Quinone oxidoreductase; 93.1 0.42 1.4E-05 42.6 9.3 95 162-275 166-270 (351)
361 4eez_A Alcohol dehydrogenase 1 93.0 0.66 2.2E-05 41.1 10.5 98 163-275 160-264 (348)
362 3fbg_A Putative arginate lyase 92.9 0.49 1.7E-05 42.0 9.4 91 166-273 150-247 (346)
363 2j6a_A Protein TRM112; transla 92.8 0.026 8.8E-07 43.6 0.7 30 82-111 104-133 (141)
364 1jvb_A NAD(H)-dependent alcoho 92.8 0.2 6.8E-06 44.7 6.7 97 162-275 166-272 (347)
365 2qrv_A DNA (cytosine-5)-methyl 92.8 0.15 5.2E-06 44.7 5.7 71 166-244 15-90 (295)
366 4h0n_A DNMT2; SAH binding, tra 92.7 0.11 3.9E-06 46.3 4.9 70 168-245 4-77 (333)
367 4eye_A Probable oxidoreductase 92.6 0.32 1.1E-05 43.2 7.8 97 161-275 154-258 (342)
368 3jyn_A Quinone oxidoreductase; 92.6 0.52 1.8E-05 41.4 9.1 98 162-277 136-242 (325)
369 2c0c_A Zinc binding alcohol de 92.5 0.8 2.7E-05 41.0 10.3 97 162-275 159-262 (362)
370 4a2c_A Galactitol-1-phosphate 92.4 1.4 4.9E-05 38.8 11.8 102 161-277 155-263 (346)
371 3fwz_A Inner membrane protein 92.3 1.8 6.2E-05 32.8 10.9 92 167-275 7-106 (140)
372 2k5c_A Uncharacterized protein 92.2 0.023 7.8E-07 39.0 -0.3 39 59-97 7-61 (95)
373 3nx4_A Putative oxidoreductase 92.2 0.46 1.6E-05 41.7 8.2 92 169-276 149-243 (324)
374 2d8a_A PH0655, probable L-thre 92.1 0.71 2.4E-05 41.0 9.4 98 162-275 164-268 (348)
375 1qor_A Quinone oxidoreductase; 92.0 0.34 1.2E-05 42.7 7.1 94 162-275 136-240 (327)
376 2eih_A Alcohol dehydrogenase; 92.0 0.99 3.4E-05 39.9 10.3 94 163-275 163-266 (343)
377 1piw_A Hypothetical zinc-type 91.7 0.19 6.3E-06 45.1 5.1 98 162-275 175-277 (360)
378 4f3n_A Uncharacterized ACR, CO 91.7 0.37 1.3E-05 44.4 7.0 46 167-212 138-188 (432)
379 2cdc_A Glucose dehydrogenase g 91.7 0.68 2.3E-05 41.5 8.8 88 167-276 181-280 (366)
380 4dcm_A Ribosomal RNA large sub 91.5 1.4 4.8E-05 39.8 10.8 112 156-277 27-139 (375)
381 2jne_A Hypothetical protein YF 91.5 0.09 3.1E-06 37.5 2.1 26 61-97 33-58 (101)
382 2h6e_A ADH-4, D-arabinose 1-de 91.4 0.27 9.1E-06 43.7 5.8 96 163-275 168-270 (344)
383 1qyp_A RNA polymerase II; tran 91.4 0.084 2.9E-06 34.1 1.8 40 59-98 14-54 (57)
384 3ius_A Uncharacterized conserv 91.2 3.5 0.00012 34.9 12.6 70 168-253 6-79 (286)
385 2k4x_A 30S ribosomal protein S 91.1 0.17 5.9E-06 32.4 3.0 35 54-97 12-46 (55)
386 3j21_g 50S ribosomal protein L 91.0 0.12 4.1E-06 32.5 2.2 28 57-97 11-38 (51)
387 3ioy_A Short-chain dehydrogena 91.0 2 7E-05 37.5 11.1 79 166-248 7-98 (319)
388 2zb4_A Prostaglandin reductase 91.0 1.3 4.5E-05 39.3 10.0 97 161-275 153-261 (357)
389 3o26_A Salutaridine reductase; 90.9 2.6 8.9E-05 36.1 11.6 77 166-247 11-101 (311)
390 2j8z_A Quinone oxidoreductase; 90.8 0.71 2.4E-05 41.2 8.0 97 163-276 159-263 (354)
391 3llv_A Exopolyphosphatase-rela 90.6 2.1 7.1E-05 32.2 9.5 90 167-274 6-103 (141)
392 1wly_A CAAR, 2-haloacrylate re 90.4 0.74 2.5E-05 40.6 7.6 95 163-276 142-246 (333)
393 2cf5_A Atccad5, CAD, cinnamyl 90.3 0.33 1.1E-05 43.4 5.4 98 163-275 176-276 (357)
394 3jyw_9 60S ribosomal protein L 90.3 0.17 5.9E-06 34.2 2.6 31 59-98 25-55 (72)
395 1vj0_A Alcohol dehydrogenase, 90.3 0.66 2.3E-05 41.8 7.4 97 164-275 193-299 (380)
396 4dup_A Quinone oxidoreductase; 90.2 0.95 3.2E-05 40.3 8.3 98 162-276 163-267 (353)
397 3pxx_A Carveol dehydrogenase; 90.2 1.9 6.4E-05 36.8 10.0 103 166-274 9-153 (287)
398 2zig_A TTHA0409, putative modi 90.2 0.26 8.9E-06 43.0 4.4 56 219-274 20-97 (297)
399 3pvc_A TRNA 5-methylaminomethy 90.1 0.31 1.1E-05 47.8 5.4 106 166-272 58-209 (689)
400 3tjr_A Short chain dehydrogena 90.1 1.6 5.6E-05 37.8 9.6 78 165-248 29-119 (301)
401 2jrp_A Putative cytoplasmic pr 90.1 0.15 5E-06 35.4 2.1 14 61-74 3-16 (81)
402 3c85_A Putative glutathione-re 90.1 3.1 0.00011 32.8 10.6 92 167-275 39-140 (183)
403 2dq4_A L-threonine 3-dehydroge 89.9 0.52 1.8E-05 41.8 6.2 96 162-275 161-263 (343)
404 3grk_A Enoyl-(acyl-carrier-pro 89.8 3.1 0.00011 35.8 11.1 103 166-275 30-170 (293)
405 1iz0_A Quinone oxidoreductase; 89.7 0.45 1.5E-05 41.4 5.6 94 164-275 123-219 (302)
406 1gh9_A 8.3 kDa protein (gene M 89.7 0.18 6E-06 34.1 2.2 32 60-102 4-35 (71)
407 4eso_A Putative oxidoreductase 89.5 1.8 6E-05 36.5 9.1 101 166-275 7-139 (255)
408 3gaz_A Alcohol dehydrogenase s 89.5 0.9 3.1E-05 40.3 7.5 95 161-275 145-247 (343)
409 1yqd_A Sinapyl alcohol dehydro 89.4 0.55 1.9E-05 42.1 6.1 95 166-275 187-283 (366)
410 1tfi_A Transcriptional elongat 89.4 0.16 5.3E-06 31.9 1.7 40 58-97 7-47 (50)
411 3ijr_A Oxidoreductase, short c 89.4 3 0.0001 35.9 10.6 103 166-274 46-182 (291)
412 3o38_A Short chain dehydrogena 89.1 3 0.0001 35.0 10.4 78 166-248 21-112 (266)
413 3is3_A 17BETA-hydroxysteroid d 89.1 3.6 0.00012 34.8 10.9 105 166-276 17-154 (270)
414 3ps9_A TRNA 5-methylaminomethy 89.1 0.46 1.6E-05 46.4 5.7 106 167-273 67-218 (676)
415 3oig_A Enoyl-[acyl-carrier-pro 88.8 2 6.8E-05 36.2 9.0 105 166-275 6-148 (266)
416 1xa0_A Putative NADPH dependen 88.8 0.89 3E-05 39.9 6.9 95 165-275 147-247 (328)
417 3tsc_A Putative oxidoreductase 88.7 3.6 0.00012 34.9 10.6 78 166-249 10-113 (277)
418 3krt_A Crotonyl COA reductase; 88.6 2.3 8E-05 39.2 9.9 96 163-275 225-345 (456)
419 3ubt_Y Modification methylase 88.5 0.99 3.4E-05 39.7 7.0 97 169-277 2-112 (331)
420 2gdz_A NAD+-dependent 15-hydro 88.5 3.6 0.00012 34.6 10.4 104 167-274 7-139 (267)
421 3v2g_A 3-oxoacyl-[acyl-carrier 88.4 3.9 0.00013 34.7 10.5 104 166-275 30-166 (271)
422 3r3s_A Oxidoreductase; structu 88.2 2.6 8.8E-05 36.3 9.4 104 166-275 48-186 (294)
423 1boo_A Protein (N-4 cytosine-s 88.2 0.33 1.1E-05 43.0 3.6 57 219-275 13-85 (323)
424 3j21_i 50S ribosomal protein L 88.1 0.16 5.6E-06 35.3 1.2 31 59-98 34-64 (83)
425 3t7c_A Carveol dehydrogenase; 88.0 5.1 0.00017 34.5 11.2 76 166-247 27-127 (299)
426 4g81_D Putative hexonate dehyd 87.9 3.3 0.00011 35.2 9.7 78 166-249 8-98 (255)
427 1wma_A Carbonyl reductase [NAD 87.8 1.1 3.7E-05 37.7 6.6 102 166-274 3-138 (276)
428 3me5_A Cytosine-specific methy 87.5 0.9 3.1E-05 42.5 6.3 73 153-231 68-146 (482)
429 3ce6_A Adenosylhomocysteinase; 87.5 1.4 4.9E-05 41.3 7.7 92 164-276 271-363 (494)
430 2vhw_A Alanine dehydrogenase; 87.3 0.34 1.2E-05 43.9 3.2 102 165-274 166-268 (377)
431 3cc2_Z 50S ribosomal protein L 87.1 0.21 7.2E-06 36.9 1.4 30 59-98 59-89 (116)
432 4dio_A NAD(P) transhydrogenase 87.1 0.79 2.7E-05 41.9 5.5 99 165-274 188-312 (405)
433 3iz5_m 60S ribosomal protein L 87.0 0.21 7.1E-06 35.4 1.2 31 59-98 35-65 (92)
434 4da9_A Short-chain dehydrogena 87.0 4.9 0.00017 34.2 10.4 77 165-247 27-117 (280)
435 4egf_A L-xylulose reductase; s 87.0 6 0.0002 33.3 10.9 78 166-248 19-109 (266)
436 1twf_L ABC10-alpha, DNA-direct 87.0 0.37 1.3E-05 32.4 2.4 28 59-96 27-54 (70)
437 1xg5_A ARPG836; short chain de 86.8 9.7 0.00033 32.1 12.2 78 166-247 31-121 (279)
438 3edm_A Short chain dehydrogena 86.8 1.3 4.3E-05 37.5 6.4 103 166-274 7-143 (259)
439 1tt7_A YHFP; alcohol dehydroge 86.8 0.81 2.8E-05 40.2 5.4 94 165-275 148-248 (330)
440 3ggo_A Prephenate dehydrogenas 86.6 5.2 0.00018 34.9 10.5 91 167-272 33-126 (314)
441 4imr_A 3-oxoacyl-(acyl-carrier 86.5 3.5 0.00012 35.2 9.1 76 166-247 32-119 (275)
442 1ja9_A 4HNR, 1,3,6,8-tetrahydr 86.4 1.8 6.2E-05 36.4 7.3 76 166-247 20-109 (274)
443 3iei_A Leucine carboxyl methyl 86.2 17 0.00059 32.1 15.9 120 156-277 79-232 (334)
444 4a17_Y RPL37A, 60S ribosomal p 86.1 0.22 7.5E-06 35.9 0.9 31 59-98 35-65 (103)
445 2eez_A Alanine dehydrogenase; 85.9 0.52 1.8E-05 42.5 3.6 102 165-275 164-267 (369)
446 3u5t_A 3-oxoacyl-[acyl-carrier 85.8 3.1 0.0001 35.3 8.4 104 166-275 26-162 (267)
447 3izc_m 60S ribosomal protein R 85.7 0.24 8.3E-06 35.0 1.0 31 59-98 35-65 (92)
448 3tqh_A Quinone oxidoreductase; 85.7 3.8 0.00013 35.6 9.2 97 160-274 146-245 (321)
449 1xhl_A Short-chain dehydrogena 85.6 4.3 0.00015 35.0 9.4 79 166-247 25-116 (297)
450 1pjc_A Protein (L-alanine dehy 85.3 0.47 1.6E-05 42.6 3.1 102 166-276 166-269 (361)
451 3t4x_A Oxidoreductase, short c 85.3 5.9 0.0002 33.4 10.0 79 166-248 9-96 (267)
452 3k31_A Enoyl-(acyl-carrier-pro 85.3 2.5 8.5E-05 36.5 7.7 103 166-275 29-169 (296)
453 4fs3_A Enoyl-[acyl-carrier-pro 85.2 3.6 0.00012 34.7 8.5 106 166-276 5-148 (256)
454 4a0s_A Octenoyl-COA reductase/ 85.2 3.3 0.00011 38.0 8.8 98 162-275 216-337 (447)
455 3po3_S Transcription elongatio 84.9 0.64 2.2E-05 37.4 3.4 40 58-97 135-175 (178)
456 3p2y_A Alanine dehydrogenase/p 84.9 0.35 1.2E-05 43.9 2.0 97 166-274 183-302 (381)
457 3iht_A S-adenosyl-L-methionine 84.6 2.6 8.9E-05 33.0 6.5 32 167-198 41-72 (174)
458 3h0g_I DNA-directed RNA polyme 84.5 1.1 3.7E-05 33.2 4.2 43 56-98 68-111 (113)
459 1ffk_W Ribosomal protein L37AE 84.1 0.31 1E-05 33.1 0.9 31 58-98 25-56 (73)
460 2ct7_A Ring finger protein 31; 84.1 1.2 4.3E-05 31.0 4.2 35 57-100 21-56 (86)
461 3sx2_A Putative 3-ketoacyl-(ac 84.1 4.7 0.00016 34.1 8.8 78 166-249 12-114 (278)
462 3l9w_A Glutathione-regulated p 84.0 7 0.00024 35.6 10.4 94 167-277 4-105 (413)
463 3e8x_A Putative NAD-dependent 84.0 6 0.00021 32.4 9.2 76 166-254 20-101 (236)
464 3h0g_I DNA-directed RNA polyme 83.9 0.87 3E-05 33.7 3.4 39 59-102 3-41 (113)
465 3ek2_A Enoyl-(acyl-carrier-pro 83.8 4.9 0.00017 33.7 8.8 104 165-275 12-154 (271)
466 4fn4_A Short chain dehydrogena 83.5 5.9 0.0002 33.5 9.0 76 166-247 6-94 (254)
467 1gee_A Glucose 1-dehydrogenase 83.2 5.8 0.0002 33.0 8.9 76 166-247 6-95 (261)
468 1e7w_A Pteridine reductase; di 83.1 19 0.00065 30.6 12.4 61 166-232 8-73 (291)
469 1g0o_A Trihydroxynaphthalene r 83.1 7.4 0.00025 33.0 9.7 104 166-275 28-164 (283)
470 3f9i_A 3-oxoacyl-[acyl-carrier 83.0 9.8 0.00033 31.4 10.3 75 165-248 12-95 (249)
471 3h0g_L DNA-directed RNA polyme 83.0 0.84 2.9E-05 29.9 2.6 31 59-99 20-50 (63)
472 1l7d_A Nicotinamide nucleotide 82.9 0.68 2.3E-05 42.0 3.0 43 165-208 170-213 (384)
473 1spx_A Short-chain reductase f 82.7 3 0.0001 35.3 7.0 78 167-247 6-96 (278)
474 2vn8_A Reticulon-4-interacting 82.5 3 0.0001 37.3 7.2 95 164-274 181-280 (375)
475 3gqv_A Enoyl reductase; medium 82.3 5.9 0.0002 35.3 9.1 93 165-274 163-263 (371)
476 4hp8_A 2-deoxy-D-gluconate 3-d 82.2 16 0.00054 30.8 11.1 76 166-249 8-91 (247)
477 4fgs_A Probable dehydrogenase 82.1 4.7 0.00016 34.6 7.9 101 165-274 27-159 (273)
478 1x13_A NAD(P) transhydrogenase 81.9 0.57 2E-05 42.8 2.1 43 165-208 170-213 (401)
479 3gvc_A Oxidoreductase, probabl 81.7 7.6 0.00026 33.0 9.2 75 166-249 28-115 (277)
480 4e6p_A Probable sorbitol dehyd 81.6 4.3 0.00015 34.0 7.5 73 166-247 7-92 (259)
481 4ayb_P DNA-directed RNA polyme 81.5 0.94 3.2E-05 27.6 2.2 33 58-97 1-33 (48)
482 3l77_A Short-chain alcohol deh 81.4 14 0.00047 30.2 10.5 77 167-249 2-92 (235)
483 6rxn_A Rubredoxin; electron tr 81.3 0.89 3E-05 27.8 2.1 37 58-96 2-39 (46)
484 2km1_A Protein DRE2; yeast, an 81.2 1.1 3.6E-05 34.3 3.1 40 233-272 55-96 (136)
485 3ksu_A 3-oxoacyl-acyl carrier 81.2 5.1 0.00017 33.7 7.9 104 166-275 10-148 (262)
486 3ucx_A Short chain dehydrogena 80.8 9.7 0.00033 31.9 9.5 76 166-247 10-98 (264)
487 3qiv_A Short-chain dehydrogena 80.8 7.6 0.00026 32.2 8.8 76 166-247 8-96 (253)
488 2x9g_A PTR1, pteridine reducta 80.6 9.1 0.00031 32.5 9.4 76 166-247 22-116 (288)
489 1lss_A TRK system potassium up 80.5 15 0.0005 26.9 10.4 90 167-273 4-101 (140)
490 2qhx_A Pteridine reductase 1; 80.5 24 0.00083 30.6 12.3 60 166-231 45-109 (328)
491 3k1f_M Transcription initiatio 79.7 0.9 3.1E-05 36.2 2.2 31 58-97 19-52 (197)
492 3h7a_A Short chain dehydrogena 78.9 5.8 0.0002 33.1 7.4 77 166-248 6-94 (252)
493 3gaf_A 7-alpha-hydroxysteroid 78.5 9.5 0.00033 31.8 8.7 77 166-248 11-100 (256)
494 4rxn_A Rubredoxin; electron tr 78.2 1.8 6.2E-05 27.4 2.9 37 58-96 1-45 (54)
495 3ga8_A HTH-type transcriptiona 78.2 0.7 2.4E-05 31.7 1.1 13 86-98 35-47 (78)
496 3swr_A DNA (cytosine-5)-methyl 78.1 2.4 8.3E-05 43.3 5.4 72 166-246 539-627 (1002)
497 2a4k_A 3-oxoacyl-[acyl carrier 77.8 16 0.00055 30.6 10.0 101 166-275 5-137 (263)
498 1pqv_S STP-alpha, transcriptio 77.7 0.94 3.2E-05 39.8 2.0 41 57-97 265-306 (309)
499 3lyl_A 3-oxoacyl-(acyl-carrier 77.3 10 0.00036 31.1 8.5 76 167-248 5-93 (247)
500 3g0o_A 3-hydroxyisobutyrate de 77.3 22 0.00075 30.5 10.8 86 167-272 7-100 (303)
No 1
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.86 E-value=4.2e-21 Score=168.90 Aligned_cols=177 Identities=24% Similarity=0.421 Sum_probs=126.6
Q ss_pred eeccCCCccccccCCCCccccccccCceeeCCCCccccCCCCeeeeecccCccCccCCCccccccccCchhhHHHHHhHH
Q 021975 61 FSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVISGLKDYTEVKPASTELFRSPFVSFLYERGWR 140 (304)
Q Consensus 61 l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~~~~~~y~~~~~~~~~~~~~~~~s~~~~~~w~ 140 (304)
+.||.|++.+.... ..++|++|+..+..++||++++......... . ....+.+ ..+
T Consensus 3 ~~Cp~C~~~~~~~~-----------~~~~C~~~~~~~~~~~Gy~~~~~~~~~~~~~-~-~~~~~~~-----------~~~ 58 (269)
T 1p91_A 3 FSCPLCHQPLSREK-----------NSYICPQRHQFDMAKEGYVNLLPVQHKRSRD-P-GDSAEMM-----------QAR 58 (269)
T ss_dssp BBCTTTCCBCEEET-----------TEEECTTCCEEEBCTTSCEECSCSSSSCSCC-C-SSSHHHH-----------HHH
T ss_pred ccCCCCCccceeCC-----------CEEECCCCCcCCcCCCEEEEeecccccCCCC-C-CCCHHHH-----------HHH
Confidence 78999999886633 5799999998888899999988653321110 0 0000000 001
Q ss_pred HhhhcCCCCCc--HHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCC
Q 021975 141 QNFNRSGFPGP--DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILT 218 (304)
Q Consensus 141 ~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~ 218 (304)
..+...++..+ ....+.+...+. .++.+|||||||+|.++..+++..+..+++|+|+++.+++.|+++.
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-------- 129 (269)
T 1p91_A 59 RAFLDAGHYQPLRDAIVAQLRERLD-DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-------- 129 (269)
T ss_dssp HHHHTTTTTHHHHHHHHHHHHHHSC-TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC--------
T ss_pred HHHHhCCCcHHHHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC--------
Confidence 22222222211 122233333332 3578999999999999999999854569999999999999998852
Q ss_pred CCeEEEEccCCCCCCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 219 SNLALVRADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 219 ~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
.++.++.+|+..+++++++||+|++.++.. +++++.++|||||++++.++..
T Consensus 130 ~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~-------~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 130 PQVTFCVASSHRLPFSDTSMDAIIRIYAPC-------KAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp TTSEEEECCTTSCSBCTTCEEEEEEESCCC-------CHHHHHHHEEEEEEEEEEEECT
T ss_pred CCcEEEEcchhhCCCCCCceeEEEEeCChh-------hHHHHHHhcCCCcEEEEEEcCH
Confidence 568899999999998889999999976532 4899999999999999999875
No 2
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.84 E-value=2.2e-21 Score=181.43 Aligned_cols=116 Identities=14% Similarity=0.185 Sum_probs=92.5
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC
Q 021975 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (304)
Q Consensus 154 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 233 (304)
..+.+.+.+...++.+|||||||+|.++..+++.+. +++|+|+|+.+++.|+++ +. ......+...+...+++
T Consensus 95 ~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~--~v~gvD~s~~~~~~a~~~----~~-~~~~~~~~~~~~~~l~~ 167 (416)
T 4e2x_A 95 LARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV--RHLGFEPSSGVAAKAREK----GI-RVRTDFFEKATADDVRR 167 (416)
T ss_dssp HHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC--EEEEECCCHHHHHHHHTT----TC-CEECSCCSHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC--cEEEECCCHHHHHHHHHc----CC-CcceeeechhhHhhccc
Confidence 344555666666788999999999999999999876 999999999999999874 10 00001122334444566
Q ss_pred CCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
++++||+|++.+++||++|+..+++++.++|||||++++.++.
T Consensus 168 ~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 168 TEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp HHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 6789999999999999999999999999999999999998875
No 3
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.84 E-value=4.4e-20 Score=162.20 Aligned_cols=127 Identities=17% Similarity=0.276 Sum_probs=105.9
Q ss_pred CCCcHHHHHHHHHhhc--ccCCCeEEEEcCCccHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEE
Q 021975 148 FPGPDEEFKMAQEYFK--SAQGGLLVDVSCGSGLFSRKFAKSG--TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLAL 223 (304)
Q Consensus 148 ~~~~~~~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~--~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~ 223 (304)
.|.+.+..+++..+.. ..++.+|||||||+|.++..+++.. ++.+|+|+|+|+.|++.|+++++..+ ...++.+
T Consensus 50 vP~Y~~~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~--~~~~v~~ 127 (261)
T 4gek_A 50 VPGYSNIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK--APTPVDV 127 (261)
T ss_dssp STTHHHHHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC--CSSCEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc--cCceEEE
Confidence 3555665555544433 3468899999999999999999874 35699999999999999999998876 4578999
Q ss_pred EEccCCCCCCCCCccceEEecchhccCCCHH--HHHHHHHHhcccCcEEEEEEeCCC
Q 021975 224 VRADVCRLPFASGFVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 224 ~~~d~~~lp~~~~~fD~V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
+++|+.++|++ .||+|++.++|+|++++. .+|++++++|||||+|++.+....
T Consensus 128 ~~~D~~~~~~~--~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~ 182 (261)
T 4gek_A 128 IEGDIRDIAIE--NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSF 182 (261)
T ss_dssp EESCTTTCCCC--SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred eeccccccccc--ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCC
Confidence 99999998864 599999999999998654 689999999999999999987653
No 4
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.84 E-value=3.3e-20 Score=162.40 Aligned_cols=117 Identities=25% Similarity=0.392 Sum_probs=104.7
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (304)
+.+.+.+...++.+|||||||+|.++..+++.++ +++|+|+|+.+++.++++.+..+ ..++.++.+|+..+|+++
T Consensus 27 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~---~~~v~~~~~d~~~l~~~~ 101 (260)
T 1vl5_A 27 AKLMQIAALKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNG---HQQVEYVQGDAEQMPFTD 101 (260)
T ss_dssp HHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTT---CCSEEEEECCC-CCCSCT
T ss_pred HHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcC---CCceEEEEecHHhCCCCC
Confidence 4455566666788999999999999999999886 99999999999999999987765 257999999999999999
Q ss_pred CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++||+|++..+++|++|+..+++++.++|||||+|++.++..
T Consensus 102 ~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSA 143 (260)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred CCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCC
Confidence 999999999999999999999999999999999999987654
No 5
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.83 E-value=1.9e-20 Score=164.06 Aligned_cols=113 Identities=27% Similarity=0.326 Sum_probs=99.4
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC
Q 021975 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (304)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (304)
+.++.+.+..+... +.+|||||||+|.++..|++.+. +|+|+|+|+.|++.|++ ..++.++++|+++
T Consensus 26 p~~l~~~l~~~~~~--~~~vLDvGcGtG~~~~~l~~~~~--~v~gvD~s~~ml~~a~~---------~~~v~~~~~~~e~ 92 (257)
T 4hg2_A 26 PRALFRWLGEVAPA--RGDALDCGCGSGQASLGLAEFFE--RVHAVDPGEAQIRQALR---------HPRVTYAVAPAED 92 (257)
T ss_dssp CHHHHHHHHHHSSC--SSEEEEESCTTTTTHHHHHTTCS--EEEEEESCHHHHHTCCC---------CTTEEEEECCTTC
T ss_pred HHHHHHHHHHhcCC--CCCEEEEcCCCCHHHHHHHHhCC--EEEEEeCcHHhhhhhhh---------cCCceeehhhhhh
Confidence 45666677766543 56999999999999999999886 99999999999988764 3689999999999
Q ss_pred CCCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 231 LPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 231 lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+|+++++||+|++..++||+ ++..+++++.|+|||||+|++.++..
T Consensus 93 ~~~~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 93 TGLPPASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp CCCCSSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred hcccCCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 99999999999999999776 68899999999999999999998865
No 6
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.83 E-value=2.1e-19 Score=160.26 Aligned_cols=121 Identities=16% Similarity=0.208 Sum_probs=107.3
Q ss_pred HHHHHHHhh----cccCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccC
Q 021975 154 EFKMAQEYF----KSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV 228 (304)
Q Consensus 154 ~~~~l~~~l----~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~ 228 (304)
..+.+...+ ...++.+|||||||+|.++..+++. +. +++|+|+++.+++.++++.+..+ ...++.++.+|+
T Consensus 66 ~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~ 141 (297)
T 2o57_A 66 TDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGV--SIDCLNIAPVQNKRNEEYNNQAG--LADNITVKYGSF 141 (297)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHHHT--CTTTEEEEECCT
T ss_pred HHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEEcCc
Confidence 345555666 5567889999999999999999987 44 99999999999999999988776 456899999999
Q ss_pred CCCCCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 229 CRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 229 ~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
.++|+++++||+|++..+++|++++..+++++.++|||||+|++.++...
T Consensus 142 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 191 (297)
T 2o57_A 142 LEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKE 191 (297)
T ss_dssp TSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred ccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccC
Confidence 99999999999999999999999999999999999999999999987653
No 7
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.82 E-value=2.3e-19 Score=152.14 Aligned_cols=122 Identities=26% Similarity=0.380 Sum_probs=107.1
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC
Q 021975 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (304)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (304)
....+.+.+.+...++ +|||+|||+|.++..+++. +..+++|+|+++.+++.++++++..+ ...++.++++|+.++
T Consensus 30 ~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~ 105 (219)
T 3dlc_A 30 PIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADAN--LNDRIQIVQGDVHNI 105 (219)
T ss_dssp HHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECBTTBC
T ss_pred HHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhcc--ccCceEEEEcCHHHC
Confidence 3445566666665445 9999999999999999998 45699999999999999999998877 456899999999999
Q ss_pred CCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++++++||+|++..+++|++++..+++++.++|||||++++.+...
T Consensus 106 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 106 PIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred CCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 9989999999999999999999999999999999999999987554
No 8
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.82 E-value=1.7e-19 Score=157.17 Aligned_cols=124 Identities=15% Similarity=0.166 Sum_probs=109.3
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccC
Q 021975 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV 228 (304)
Q Consensus 149 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~ 228 (304)
+......+.+...+...++.+|||||||+|.++..+++.. ..+++|+|+|+.+++.++++.+..+ ...++.++++|+
T Consensus 19 ~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~--~~~~v~~~~~d~ 95 (256)
T 1nkv_A 19 PFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELG--VSERVHFIHNDA 95 (256)
T ss_dssp SCCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCC
T ss_pred CCCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEECCh
Confidence 3445566677777777788899999999999999999874 3499999999999999999988776 346899999999
Q ss_pred CCCCCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 229 CRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 229 ~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
.++++ +++||+|++..+++|++++..+++++.++|||||++++.++.
T Consensus 96 ~~~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 96 AGYVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp TTCCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEE
T ss_pred HhCCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCc
Confidence 99887 789999999999999999999999999999999999998764
No 9
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.81 E-value=3.4e-19 Score=156.79 Aligned_cols=121 Identities=26% Similarity=0.379 Sum_probs=107.5
Q ss_pred HHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCC
Q 021975 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (304)
Q Consensus 155 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 234 (304)
.+.+.+.+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.++++.+..+ ...++.++.+|+.++|++
T Consensus 50 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~~~ 126 (273)
T 3bus_A 50 TDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAG--LANRVTFSYADAMDLPFE 126 (273)
T ss_dssp HHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTTSCCSC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEECccccCCCC
Confidence 3455566666678899999999999999999874 4599999999999999999988776 346799999999999998
Q ss_pred CCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
+++||+|++..+++|++++..+++++.++|||||++++.++...
T Consensus 127 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 170 (273)
T 3bus_A 127 DASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLL 170 (273)
T ss_dssp TTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEES
T ss_pred CCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeecc
Confidence 89999999999999999999999999999999999999987653
No 10
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.81 E-value=3.2e-19 Score=151.86 Aligned_cols=124 Identities=13% Similarity=0.112 Sum_probs=104.1
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcc--CCCCeEEEEccCCC
Q 021975 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI--LTSNLALVRADVCR 230 (304)
Q Consensus 153 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~--~~~~i~~~~~d~~~ 230 (304)
+..+.+.+.+...++.+|||||||+|.++..+++.++..+++|+|+++.+++.++++++..++. ...++.++++|+..
T Consensus 16 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 95 (217)
T 3jwh_A 16 QRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTY 95 (217)
T ss_dssp HHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTS
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccc
Confidence 3445666666666788999999999999999999876679999999999999999998765520 01279999999988
Q ss_pred CCCCCCccceEEecchhccCCCH--HHHHHHHHHhcccCcEEEEEEeC
Q 021975 231 LPFASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 231 lp~~~~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
.+.+.++||+|++..+++|++++ ..+++++.++|||||+++++...
T Consensus 96 ~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 143 (217)
T 3jwh_A 96 QDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNI 143 (217)
T ss_dssp CCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBH
T ss_pred ccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCc
Confidence 77777899999999999999977 78999999999999977766543
No 11
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.81 E-value=5.9e-19 Score=152.66 Aligned_cols=117 Identities=18% Similarity=0.318 Sum_probs=106.0
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (304)
..+.+.+...++.+|||||||+|.++..+++.+. +++|+|+++.+++.++++++..+ ..++.++.+|++.+++++
T Consensus 11 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~~~ 85 (239)
T 1xxl_A 11 GLMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKG---VENVRFQQGTAESLPFPD 85 (239)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHT---CCSEEEEECBTTBCCSCT
T ss_pred chHHHHhCcCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcC---CCCeEEEecccccCCCCC
Confidence 3455566677889999999999999999999886 99999999999999999988765 257999999999999988
Q ss_pred CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++||+|++..+++|++++..+++++.++|||||++++.++..
T Consensus 86 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 86 DSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred CcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 999999999999999999999999999999999999988765
No 12
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.81 E-value=3.6e-19 Score=151.72 Aligned_cols=123 Identities=16% Similarity=0.181 Sum_probs=102.9
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcc--CCCCeEEEEccCCCC
Q 021975 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI--LTSNLALVRADVCRL 231 (304)
Q Consensus 154 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~--~~~~i~~~~~d~~~l 231 (304)
..+.+.+.+...++.+|||||||+|.++..+++.++..+++|+|+|+.+++.+++++...++. ...++.++++|+...
T Consensus 17 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (219)
T 3jwg_A 17 RLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR 96 (219)
T ss_dssp HHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC
T ss_pred HHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc
Confidence 345566666666788999999999999999999886679999999999999999988765410 012799999999888
Q ss_pred CCCCCccceEEecchhccCCCH--HHHHHHHHHhcccCcEEEEEEeC
Q 021975 232 PFASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
++.+++||+|++..+++|++++ ..+++++.++|||||+++.....
T Consensus 97 ~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 97 DKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp CGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBG
T ss_pred ccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccch
Confidence 8778899999999999999977 68999999999999966655543
No 13
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.81 E-value=5.4e-19 Score=155.28 Aligned_cols=124 Identities=20% Similarity=0.309 Sum_probs=108.7
Q ss_pred CCcHHHHHHHHHhhc-ccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEcc
Q 021975 149 PGPDEEFKMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD 227 (304)
Q Consensus 149 ~~~~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d 227 (304)
+........+...+. ..++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.++++++..+ ...++.++++|
T Consensus 28 ~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d 104 (267)
T 3kkz_A 28 PGSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSG--LQNRVTGIVGS 104 (267)
T ss_dssp SCCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECC
T ss_pred CCCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcC--CCcCcEEEEcC
Confidence 344455555666655 456889999999999999999998 45699999999999999999998877 45679999999
Q ss_pred CCCCCCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 228 VCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 228 ~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+.++++++++||+|++..+++|+ ++..+++++.++|||||++++.++.
T Consensus 105 ~~~~~~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 105 MDDLPFRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp TTSCCCCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred hhhCCCCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEee
Confidence 99999888999999999999999 8999999999999999999999875
No 14
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.80 E-value=7.2e-19 Score=153.28 Aligned_cols=124 Identities=17% Similarity=0.283 Sum_probs=108.3
Q ss_pred CCcHHHHHHHHHhhc-ccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEcc
Q 021975 149 PGPDEEFKMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD 227 (304)
Q Consensus 149 ~~~~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d 227 (304)
+........+...+. ..++.+|||||||+|.++..+++.++ .+|+|+|+++.+++.++++.+..+ ...++.++++|
T Consensus 28 ~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d 104 (257)
T 3f4k_A 28 PGSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKAN--CADRVKGITGS 104 (257)
T ss_dssp SCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECC
T ss_pred CCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECC
Confidence 444555556666653 45678999999999999999999975 499999999999999999998877 45669999999
Q ss_pred CCCCCCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 228 VCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 228 ~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+..+++++++||+|++..+++|+ ++..+++++.++|||||++++.++.
T Consensus 105 ~~~~~~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 105 MDNLPFQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp TTSCSSCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred hhhCCCCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEee
Confidence 99999988999999999999999 8999999999999999999999864
No 15
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.80 E-value=5.6e-19 Score=150.31 Aligned_cols=119 Identities=17% Similarity=0.304 Sum_probs=106.3
Q ss_pred HHHHhhcccCCCeEEEEcCCccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC
Q 021975 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (304)
Q Consensus 157 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (304)
.+...+...++.+|||+|||+|.++..+++.+ +..+++|+|+++.+++.+++++...+. .++.++.+|+..+++++
T Consensus 28 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~d~~~~~~~~ 104 (219)
T 3dh0_A 28 KVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL---KNVEVLKSEENKIPLPD 104 (219)
T ss_dssp HHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC---TTEEEEECBTTBCSSCS
T ss_pred HHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEecccccCCCCC
Confidence 34455556678899999999999999999985 566999999999999999999887762 47999999999999889
Q ss_pred CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
++||+|++..+++|++++..+++++.++|||||++++.++...
T Consensus 105 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 147 (219)
T 3dh0_A 105 NTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKE 147 (219)
T ss_dssp SCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred CCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccc
Confidence 9999999999999999999999999999999999999987764
No 16
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.80 E-value=7e-19 Score=155.16 Aligned_cols=119 Identities=19% Similarity=0.355 Sum_probs=105.9
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (304)
+.+.......++.+|||||||+|.++..+++.++..+++|+|+++.+++.+++++...+ ..++.++.+|+..+++++
T Consensus 27 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~~~ 103 (276)
T 3mgg_A 27 KLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNG---IKNVKFLQANIFSLPFED 103 (276)
T ss_dssp HHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEECCGGGCCSCT
T ss_pred HHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEcccccCCCCC
Confidence 34444444457889999999999999999999777899999999999999999988776 357999999999999889
Q ss_pred CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++||+|++..+++|++++..+++++.++|||||++++.++..
T Consensus 104 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (276)
T 3mgg_A 104 SSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDH 145 (276)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECG
T ss_pred CCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 999999999999999999999999999999999999988643
No 17
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.79 E-value=3.6e-19 Score=150.48 Aligned_cols=112 Identities=15% Similarity=0.184 Sum_probs=92.1
Q ss_pred hcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCc---------cCCCCeEEEEccCCCCC
Q 021975 162 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNT---------ILTSNLALVRADVCRLP 232 (304)
Q Consensus 162 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~---------~~~~~i~~~~~d~~~lp 232 (304)
+...++.+|||+|||+|..+..|++.+. +|+|+|+|+.|++.|+++.+.... ....++.++++|+.+++
T Consensus 18 l~~~~~~~vLD~GCG~G~~~~~la~~g~--~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~ 95 (203)
T 1pjz_A 18 LNVVPGARVLVPLCGKSQDMSWLSGQGY--HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT 95 (203)
T ss_dssp HCCCTTCEEEETTTCCSHHHHHHHHHCC--EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred cccCCCCEEEEeCCCCcHhHHHHHHCCC--eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCC
Confidence 3445678999999999999999999976 999999999999999987643100 01257999999999998
Q ss_pred CCC-CccceEEecchhccCCCH--HHHHHHHHHhcccCcEEEEEEe
Q 021975 233 FAS-GFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 233 ~~~-~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
+.+ ++||+|++..+++|++.. ..+++++.++|||||++++.+.
T Consensus 96 ~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~ 141 (203)
T 1pjz_A 96 ARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITL 141 (203)
T ss_dssp HHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEE
T ss_pred cccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence 765 799999999999999754 4689999999999998555543
No 18
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.79 E-value=1.6e-18 Score=149.01 Aligned_cols=121 Identities=17% Similarity=0.299 Sum_probs=104.5
Q ss_pred cHHHHHHHHHhhc-ccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCC
Q 021975 151 PDEEFKMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (304)
Q Consensus 151 ~~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~ 229 (304)
.....+.+...+. ..++.+|||+|||+|.++..+++..+..+++|+|+|+.+++.+++++... .++.++++|+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~ 102 (234)
T 3dtn_A 28 FDDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN-----LKVKYIEADYS 102 (234)
T ss_dssp HHHHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC-----TTEEEEESCTT
T ss_pred HHHHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC-----CCEEEEeCchh
Confidence 3444556666665 44678999999999999999999977779999999999999999986543 38999999999
Q ss_pred CCCCCCCccceEEecchhccCCCHH--HHHHHHHHhcccCcEEEEEEeCC
Q 021975 230 RLPFASGFVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 230 ~lp~~~~~fD~V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+++++ ++||+|++..+++|++++. .+++++.++|||||++++.++..
T Consensus 103 ~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 103 KYDFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp TCCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred ccCCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 98876 8999999999999998776 59999999999999999999765
No 19
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.79 E-value=1e-18 Score=148.48 Aligned_cols=114 Identities=15% Similarity=0.264 Sum_probs=99.8
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (304)
..+...+...++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++.... .++.++++|+.+++ ++
T Consensus 41 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~-~~ 112 (216)
T 3ofk_A 41 QLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK--RLTVIDVMPRAIGRACQRTKRW-----SHISWAATDILQFS-TA 112 (216)
T ss_dssp HHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE--EEEEEESCHHHHHHHHHHTTTC-----SSEEEEECCTTTCC-CS
T ss_pred HHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcccC-----CCeEEEEcchhhCC-CC
Confidence 4455556666778999999999999999999875 9999999999999999987643 47999999999987 67
Q ss_pred CccceEEecchhccCCCHH---HHHHHHHHhcccCcEEEEEEeCC
Q 021975 236 GFVDAVHAGAALHCWPSPS---NAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~---~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++||+|++..+++|++++. .+++++.++|||||++++.++..
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 113 ELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp CCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 8999999999999999984 67999999999999999988654
No 20
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.79 E-value=1.9e-18 Score=155.44 Aligned_cols=119 Identities=18% Similarity=0.211 Sum_probs=105.8
Q ss_pred HHHHHhhc-ccCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC
Q 021975 156 KMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (304)
Q Consensus 156 ~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 233 (304)
+.+.+.+. ..++.+|||||||+|.++..+++. +. +|+|+|+++.+++.|+++.+..+ ...++.++.+|+.++++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~ 181 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGS--RVEGVTLSAAQADFGNRRARELR--IDDHVRSRVCNMLDTPF 181 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTTSCCC
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHcC--CCCceEEEECChhcCCC
Confidence 45556665 567889999999999999999988 54 99999999999999999998877 45689999999999998
Q ss_pred CCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCCCC
Q 021975 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYT 279 (304)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~~~ 279 (304)
++++||+|++..+++|+ ++..+++++.++|||||++++.++....
T Consensus 182 ~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 226 (312)
T 3vc1_A 182 DKGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNP 226 (312)
T ss_dssp CTTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECT
T ss_pred CCCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccccc
Confidence 88999999999999999 6999999999999999999999876543
No 21
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.79 E-value=2.3e-18 Score=153.92 Aligned_cols=123 Identities=20% Similarity=0.319 Sum_probs=105.9
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhc-CccCCCCeEEEEccC
Q 021975 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQD-NTILTSNLALVRADV 228 (304)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~-~~~~~~~i~~~~~d~ 228 (304)
+....+.+..+.. .++.+|||||||+|.++..+++.. +..+|+|+|+|+.+++.|+++++.. + ...++.++++|+
T Consensus 22 ~~~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~v~~~~~d~ 98 (299)
T 3g5t_A 22 PSDFYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPD--TYKNVSFKISSS 98 (299)
T ss_dssp CHHHHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC---CCTTEEEEECCT
T ss_pred CHHHHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccC--CCCceEEEEcCH
Confidence 4556666666654 367899999999999999999753 5679999999999999999998875 2 247899999999
Q ss_pred CCCCCCC------CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 229 CRLPFAS------GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 229 ~~lp~~~------~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
.++++.+ ++||+|++..++||+ ++..+++++.++|||||+|++.++..
T Consensus 99 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~ 152 (299)
T 3g5t_A 99 DDFKFLGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYAD 152 (299)
T ss_dssp TCCGGGCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred HhCCccccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 9998877 899999999999999 99999999999999999999966543
No 22
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.79 E-value=1.9e-18 Score=149.12 Aligned_cols=115 Identities=26% Similarity=0.405 Sum_probs=101.6
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC
Q 021975 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (304)
Q Consensus 154 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 233 (304)
..+.+...+. ++.+|||||||+|.++..+++.+. +++|+|+++.+++.++++. ...++.++++|+.++++
T Consensus 43 ~~~~l~~~~~--~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~------~~~~~~~~~~d~~~~~~ 112 (242)
T 3l8d_A 43 IIPFFEQYVK--KEAEVLDVGCGDGYGTYKLSRTGY--KAVGVDISEVMIQKGKERG------EGPDLSFIKGDLSSLPF 112 (242)
T ss_dssp HHHHHHHHSC--TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHTTT------CBTTEEEEECBTTBCSS
T ss_pred HHHHHHHHcC--CCCeEEEEcCCCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhc------ccCCceEEEcchhcCCC
Confidence 4455555554 478999999999999999999865 9999999999999998864 23689999999999998
Q ss_pred CCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
++++||+|++.++++|++++..+++++.++|||||++++.++...
T Consensus 113 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 157 (242)
T 3l8d_A 113 ENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPT 157 (242)
T ss_dssp CTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCc
Confidence 899999999999999999999999999999999999999997653
No 23
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.79 E-value=1.1e-18 Score=151.95 Aligned_cols=115 Identities=18% Similarity=0.247 Sum_probs=102.0
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (304)
..+...+...++.+|||||||+|.++..+++.++ .+++|+|+++.+++.++++.. ..++.++++|+.++++++
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~ 106 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTT------SPVVCYEQKAIEDIAIEP 106 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCC------CTTEEEEECCGGGCCCCT
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhc------cCCeEEEEcchhhCCCCC
Confidence 3455566666788999999999999999999874 399999999999999998764 267999999999999888
Q ss_pred CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++||+|++..+++|++++..+++++.++|||||++++.++..
T Consensus 107 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 148 (253)
T 3g5l_A 107 DAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHP 148 (253)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCCC
Confidence 999999999999999999999999999999999999987653
No 24
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.78 E-value=1e-18 Score=152.67 Aligned_cols=123 Identities=12% Similarity=0.148 Sum_probs=106.3
Q ss_pred CcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCC
Q 021975 150 GPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (304)
Q Consensus 150 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~ 229 (304)
......+.+.+.+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.++++.... .++.++++|+.
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~ 112 (266)
T 3ujc_A 39 GGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN-----NKIIFEANDIL 112 (266)
T ss_dssp THHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC-----TTEEEEECCTT
T ss_pred chHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC-----CCeEEEECccc
Confidence 334455666666666778899999999999999999973 349999999999999999865432 58999999999
Q ss_pred CCCCCCCccceEEecchhccC--CCHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 230 RLPFASGFVDAVHAGAALHCW--PSPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 230 ~lp~~~~~fD~V~~~~vl~h~--~d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
++++++++||+|++..+++|+ .++..+++++.++|||||++++.++...
T Consensus 113 ~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (266)
T 3ujc_A 113 TKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCAT 163 (266)
T ss_dssp TCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred cCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 999989999999999999999 7889999999999999999999987653
No 25
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.78 E-value=1.6e-18 Score=153.77 Aligned_cols=107 Identities=20% Similarity=0.288 Sum_probs=98.0
Q ss_pred CCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-CCCCccceEEecc
Q 021975 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FASGFVDAVHAGA 245 (304)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~~~~~fD~V~~~~ 245 (304)
+.+|||||||+|.++..+++.+. +++|+|+++.+++.|+++++..+ ...++.++++|+.+++ +.+++||+|++..
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 144 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGH--QVILCDLSAQMIDRAKQAAEAKG--VSDNMQFIHCAAQDVASHLETPVDLILFHA 144 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC-C--CGGGEEEEESCGGGTGGGCSSCEEEEEEES
T ss_pred CCEEEEeCCcchHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CCcceEEEEcCHHHhhhhcCCCceEEEECc
Confidence 67999999999999999999865 99999999999999999998776 3468999999999887 7789999999999
Q ss_pred hhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 246 ALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 246 vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+++|++++..+++++.++|||||++++.++..
T Consensus 145 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (285)
T 4htf_A 145 VLEWVADPRSVLQTLWSVLRPGGVLSLMFYNA 176 (285)
T ss_dssp CGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBH
T ss_pred hhhcccCHHHHHHHHHHHcCCCeEEEEEEeCC
Confidence 99999999999999999999999999998754
No 26
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.78 E-value=1.3e-18 Score=150.40 Aligned_cols=103 Identities=14% Similarity=0.162 Sum_probs=93.7
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEec
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (304)
.++.+|||||||+|.++..+++.++ +|+|+|+|+.+++.|+++.. .++.++++|+.++ +++++||+|++.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~-------~~v~~~~~d~~~~-~~~~~fD~v~~~ 110 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLK-------DGITYIHSRFEDA-QLPRRYDNIVLT 110 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSC-------SCEEEEESCGGGC-CCSSCEEEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhh-------CCeEEEEccHHHc-CcCCcccEEEEh
Confidence 4567899999999999999999887 99999999999999998642 2799999999887 467899999999
Q ss_pred chhccCCCHHHHHHHHH-HhcccCcEEEEEEeCC
Q 021975 245 AALHCWPSPSNAVAEIS-RILRSGGVFVGTTFLR 277 (304)
Q Consensus 245 ~vl~h~~d~~~~l~~~~-r~LkpgG~lvi~~~~~ 277 (304)
+++||++++..+++++. ++|||||++++.++..
T Consensus 111 ~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 111 HVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNA 144 (250)
T ss_dssp SCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred hHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCCh
Confidence 99999999999999999 9999999999999765
No 27
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.78 E-value=1.3e-18 Score=152.61 Aligned_cols=115 Identities=23% Similarity=0.268 Sum_probs=101.4
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC
Q 021975 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (304)
Q Consensus 153 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp 232 (304)
...+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++ .++.++++|+.+++
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~---------~~~~~~~~d~~~~~ 89 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQGL--FVYAVEPSIVMRQQAVVH---------PQVEWFTGYAENLA 89 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTTC--EEEEECSCHHHHHSSCCC---------TTEEEECCCTTSCC
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCCC--EEEEEeCCHHHHHHHHhc---------cCCEEEECchhhCC
Confidence 4456677777766788999999999999999998654 999999999999887652 38999999999999
Q ss_pred CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCCCC
Q 021975 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYT 279 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~~~ 279 (304)
+++++||+|++.++++|++++..+++++.++|| ||++++.++....
T Consensus 90 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~ 135 (261)
T 3ege_A 90 LPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRL 135 (261)
T ss_dssp SCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGG
T ss_pred CCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCch
Confidence 989999999999999999999999999999999 9999999887543
No 28
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.78 E-value=2.7e-18 Score=149.96 Aligned_cols=121 Identities=20% Similarity=0.233 Sum_probs=96.0
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc---------C-c----cCCC
Q 021975 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD---------N-T----ILTS 219 (304)
Q Consensus 154 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---------~-~----~~~~ 219 (304)
+.+.+.......++.+|||+|||+|..+..|++.|. +|+|+|+|+.+++.|+++.... + . ....
T Consensus 56 l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~--~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (252)
T 2gb4_A 56 LKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGH--TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSG 133 (252)
T ss_dssp HHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTC--EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTS
T ss_pred HHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCC--eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCC
Confidence 334444433334678999999999999999999987 9999999999999998765310 0 0 0125
Q ss_pred CeEEEEccCCCCCCCC-CccceEEecchhccCCC--HHHHHHHHHHhcccCcEEEEEEeC
Q 021975 220 NLALVRADVCRLPFAS-GFVDAVHAGAALHCWPS--PSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 220 ~i~~~~~d~~~lp~~~-~~fD~V~~~~vl~h~~d--~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
++.++++|+.++++.+ ++||+|++..+++|++. ...+++++.++|||||++++.++.
T Consensus 134 ~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~ 193 (252)
T 2gb4_A 134 SISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLS 193 (252)
T ss_dssp SEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 7999999999998764 89999999999999974 357899999999999999766543
No 29
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.78 E-value=2.1e-18 Score=150.41 Aligned_cols=112 Identities=18% Similarity=0.173 Sum_probs=99.4
Q ss_pred HHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCC
Q 021975 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (304)
Q Consensus 157 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~ 236 (304)
.+...+...++.+|||||||+|.++..+++..+..+++|+|+++.+++.++++ ..++.++.+|+..++ +++
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~--------~~~~~~~~~d~~~~~-~~~ 94 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR--------LPNTNFGKADLATWK-PAQ 94 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH--------STTSEEEECCTTTCC-CSS
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh--------CCCcEEEECChhhcC-ccC
Confidence 44455555677899999999999999999985556999999999999999985 257899999999988 788
Q ss_pred ccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 237 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+||+|++..+++|++++..+++++.++|||||++++.++..
T Consensus 95 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 95 KADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp CEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred CcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 99999999999999999999999999999999999998754
No 30
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.77 E-value=1.4e-18 Score=146.16 Aligned_cols=102 Identities=15% Similarity=0.223 Sum_probs=94.5
Q ss_pred CCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEecch
Q 021975 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAA 246 (304)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~v 246 (304)
+.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++ ..++.++++|+.++++++++||+|++..+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 111 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH--QIEGLEPATRLVELARQT--------HPSVTFHHGTITDLSDSPKRWAGLLAWYS 111 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC--CEEEECCCHHHHHHHHHH--------CTTSEEECCCGGGGGGSCCCEEEEEEESS
T ss_pred CCeEEEecCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHHh--------CCCCeEEeCcccccccCCCCeEEEEehhh
Confidence 77999999999999999999876 999999999999999985 25789999999999988899999999999
Q ss_pred hccCC--CHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 247 LHCWP--SPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 247 l~h~~--d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
++|++ ++..+++++.++|||||++++.++...
T Consensus 112 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 112 LIHMGPGELPDALVALRMAVEDGGGLLMSFFSGP 145 (203)
T ss_dssp STTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCS
T ss_pred HhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCC
Confidence 99997 889999999999999999999997663
No 31
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.77 E-value=4.5e-18 Score=150.95 Aligned_cols=115 Identities=15% Similarity=0.189 Sum_probs=101.5
Q ss_pred HHHHhh-cccCCCeEEEEcCCccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCC
Q 021975 157 MAQEYF-KSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (304)
Q Consensus 157 ~l~~~l-~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 234 (304)
.+.+.+ ...++.+|||||||+|.++..+++..+ ..+|+|+|+|+.+++.+++++...+ .++.++++|+.+++++
T Consensus 12 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~----~~v~~~~~d~~~~~~~ 87 (284)
T 3gu3_A 12 FLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP----YDSEFLEGDATEIELN 87 (284)
T ss_dssp HHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS----SEEEEEESCTTTCCCS
T ss_pred HHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC----CceEEEEcchhhcCcC
Confidence 344333 445678999999999999999999865 3699999999999999999987755 4899999999998874
Q ss_pred CCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
++||+|++..+++|++++..+++++.++|||||++++.++.
T Consensus 88 -~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 88 -DKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp -SCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -CCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 69999999999999999999999999999999999999876
No 32
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.77 E-value=5.6e-18 Score=151.56 Aligned_cols=117 Identities=16% Similarity=0.163 Sum_probs=102.3
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (304)
+.+...+...++.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.|+++.+..+ ...++.++.+|+.++ +
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~---~ 135 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVD--SPRRKEVRIQGWEEF---D 135 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSC--CSSCEEEEECCGGGC---C
T ss_pred HHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcC--CCCceEEEECCHHHc---C
Confidence 3455556666788999999999999999999832 499999999999999999998877 456899999999876 6
Q ss_pred CccceEEecchhccCCCH---------HHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 236 GFVDAVHAGAALHCWPSP---------SNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~---------~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
++||+|++..+++|++|| ..+++++.++|||||++++.++...
T Consensus 136 ~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 136 EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 899999999999999887 6899999999999999999998764
No 33
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.77 E-value=3.4e-18 Score=145.52 Aligned_cols=110 Identities=18% Similarity=0.264 Sum_probs=97.1
Q ss_pred HHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCc
Q 021975 158 AQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGF 237 (304)
Q Consensus 158 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~ 237 (304)
+.+.+...++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++.. .++.++.+|+.+++++ ++
T Consensus 37 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~d~~~~~~~-~~ 106 (220)
T 3hnr_A 37 ILEDVVNKSFGNVLEFGVGTGNLTNKLLLAGR--TVYGIEPSREMRMIAKEKLP-------KEFSITEGDFLSFEVP-TS 106 (220)
T ss_dssp HHHHHHHTCCSEEEEECCTTSHHHHHHHHTTC--EEEEECSCHHHHHHHHHHSC-------TTCCEESCCSSSCCCC-SC
T ss_pred HHHHhhccCCCeEEEeCCCCCHHHHHHHhCCC--eEEEEeCCHHHHHHHHHhCC-------CceEEEeCChhhcCCC-CC
Confidence 33444445678999999999999999999865 99999999999999998642 3789999999999887 89
Q ss_pred cceEEecchhccCCCHHH--HHHHHHHhcccCcEEEEEEeCC
Q 021975 238 VDAVHAGAALHCWPSPSN--AVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 238 fD~V~~~~vl~h~~d~~~--~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
||+|++..+++|++++.. +++++.++|||||++++.++..
T Consensus 107 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 107 IDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred eEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 999999999999999987 9999999999999999998654
No 34
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.77 E-value=6.1e-18 Score=147.64 Aligned_cols=104 Identities=22% Similarity=0.348 Sum_probs=94.9
Q ss_pred ccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEe
Q 021975 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (304)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (304)
..++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.+++++.. ...++.++.+|+.++++++++||+|++
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~d~~~~~~~~~~fD~v~~ 110 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIARGY--RYIALDADAAMLEVFRQKIAG----VDRKVQVVQADARAIPLPDESVHGVIV 110 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTTTC--EEEEEESCHHHHHHHHHHTTT----SCTTEEEEESCTTSCCSCTTCEEEEEE
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhc----cCCceEEEEcccccCCCCCCCeeEEEE
Confidence 35678999999999999999998865 999999999999999998722 247899999999999988899999999
Q ss_pred cchhccCCCHHHHHHHHHHhcccCcEEEEE
Q 021975 244 GAALHCWPSPSNAVAEISRILRSGGVFVGT 273 (304)
Q Consensus 244 ~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~ 273 (304)
..+++|++++..+++++.++|||||++++.
T Consensus 111 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 111 VHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp ESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 999999999999999999999999999987
No 35
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.76 E-value=8.7e-18 Score=140.44 Aligned_cols=114 Identities=22% Similarity=0.247 Sum_probs=99.8
Q ss_pred HHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCc
Q 021975 158 AQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGF 237 (304)
Q Consensus 158 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~ 237 (304)
+.+.+...++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++.+..+ ..++.++.+|+..+++ +++
T Consensus 24 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~-~~~ 97 (199)
T 2xvm_A 24 VLEAVKVVKPGKTLDLGCGNGRNSLYLAANGY--DVDAWDKNAMSIANVERIKSIEN---LDNLHTRVVDLNNLTF-DRQ 97 (199)
T ss_dssp HHHHTTTSCSCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHT---CTTEEEEECCGGGCCC-CCC
T ss_pred HHHHhhccCCCeEEEEcCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhCC---CCCcEEEEcchhhCCC-CCC
Confidence 44445555678999999999999999999865 99999999999999999987765 2479999999998887 789
Q ss_pred cceEEecchhccCC--CHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 238 VDAVHAGAALHCWP--SPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 238 fD~V~~~~vl~h~~--d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
||+|++..+++|++ ++..+++++.++|||||++++.++..
T Consensus 98 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (199)
T 2xvm_A 98 YDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMD 139 (199)
T ss_dssp EEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred ceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeec
Confidence 99999999999998 78899999999999999988877654
No 36
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.76 E-value=3.9e-18 Score=146.87 Aligned_cols=106 Identities=17% Similarity=0.202 Sum_probs=94.4
Q ss_pred CCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEecch
Q 021975 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAA 246 (304)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~v 246 (304)
+.+|||||||+|.++..+++.+. +|+|+|+++.+++.++++....+ ...++.++++|+.+++ ++++||+|++..+
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~ 141 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPER--FVVGLDISESALAKANETYGSSP--KAEYFSFVKEDVFTWR-PTELFDLIFDYVF 141 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTE--EEEEECSCHHHHHHHHHHHTTSG--GGGGEEEECCCTTTCC-CSSCEEEEEEESS
T ss_pred CCCEEEeCCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHhhccC--CCcceEEEECchhcCC-CCCCeeEEEEChh
Confidence 45999999999999999988665 99999999999999999887644 3467999999999877 4569999999999
Q ss_pred hccCC--CHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 247 LHCWP--SPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 247 l~h~~--d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++|++ ++..+++++.++|||||+|++.++..
T Consensus 142 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 142 FCAIEPEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp TTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred hhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 99999 88899999999999999999988754
No 37
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.76 E-value=7.6e-18 Score=142.51 Aligned_cols=101 Identities=28% Similarity=0.338 Sum_probs=91.7
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEecc
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 245 (304)
++.+|||+|||+|.++..+ + ..+++|+|+++.+++.++++. .++.++++|+.++++++++||+|++.+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~-~~~v~~vD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~fD~v~~~~ 103 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---P-YPQKVGVEPSEAMLAVGRRRA--------PEATWVRAWGEALPFPGESFDVVLLFT 103 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---C-CSEEEEECCCHHHHHHHHHHC--------TTSEEECCCTTSCCSCSSCEEEEEEES
T ss_pred CCCeEEEECCCCCHhHHhC---C-CCeEEEEeCCHHHHHHHHHhC--------CCcEEEEcccccCCCCCCcEEEEEEcC
Confidence 6789999999999999887 2 238999999999999999863 468899999999998889999999999
Q ss_pred hhccCCCHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 246 ALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 246 vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
+++|++++..+++++.++|||||++++.++...
T Consensus 104 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 104 TLEFVEDVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp CTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred hhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 999999999999999999999999999998764
No 38
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.76 E-value=1e-17 Score=148.53 Aligned_cols=116 Identities=19% Similarity=0.217 Sum_probs=100.7
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 234 (304)
+.+.+.+...++.+|||||||+|.++..+++. +. +|+|+|+|+.+++.++++++..+ ...++.++.+|+.++|
T Consensus 54 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvd~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~-- 127 (287)
T 1kpg_A 54 DLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV--NVVGLTLSKNQANHVQQLVANSE--NLRSKRVLLAGWEQFD-- 127 (287)
T ss_dssp HHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHTCC--CCSCEEEEESCGGGCC--
T ss_pred HHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC--CCCCeEEEECChhhCC--
Confidence 34555556667889999999999999999955 54 99999999999999999988776 3568999999998765
Q ss_pred CCccceEEecchhccC--CCHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 235 SGFVDAVHAGAALHCW--PSPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 235 ~~~fD~V~~~~vl~h~--~d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
++||+|++..+++|+ .++..+++++.++|||||++++.++...
T Consensus 128 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 128 -EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp -CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred -CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 789999999999999 6889999999999999999999987753
No 39
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.76 E-value=2.6e-18 Score=151.91 Aligned_cols=109 Identities=28% Similarity=0.449 Sum_probs=96.7
Q ss_pred HHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCc
Q 021975 158 AQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGF 237 (304)
Q Consensus 158 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~ 237 (304)
+.+.+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.++++. .++.++.+|+..+++ +++
T Consensus 49 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~-~~~ 117 (279)
T 3ccf_A 49 LLQLLNPQPGEFILDLGCGTGQLTEKIAQSG--AEVLGTDNAATMIEKARQNY--------PHLHFDVADARNFRV-DKP 117 (279)
T ss_dssp HHHHHCCCTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHC--------TTSCEEECCTTTCCC-SSC
T ss_pred HHHHhCCCCCCEEEEecCCCCHHHHHHHhCC--CeEEEEECCHHHHHHHHhhC--------CCCEEEECChhhCCc-CCC
Confidence 4455555678899999999999999999854 49999999999999998853 568899999999887 579
Q ss_pred cceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 238 VDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 238 fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
||+|++..+++|++|+..+++++.++|||||++++.++..
T Consensus 118 fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 118 LDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred cCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 9999999999999999999999999999999999988764
No 40
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.76 E-value=3.4e-18 Score=146.59 Aligned_cols=110 Identities=21% Similarity=0.340 Sum_probs=98.5
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcc--CCCCeEEEEccCCCCCCCCCccceEEe
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI--LTSNLALVRADVCRLPFASGFVDAVHA 243 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~--~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (304)
++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++....+.. ...++.++.+|+..+++++++||+|++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGY--SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 478999999999999999999865 9999999999999999988765520 023689999999999988999999999
Q ss_pred cchhccCCCHH---HHHHHHHHhcccCcEEEEEEeCC
Q 021975 244 GAALHCWPSPS---NAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 244 ~~vl~h~~d~~---~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
..+++|++++. .+++++.++|||||++++.++..
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 99999999998 89999999999999999998865
No 41
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.76 E-value=8.4e-18 Score=149.46 Aligned_cols=125 Identities=21% Similarity=0.207 Sum_probs=105.6
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcc-CCCCeEEEEccCC
Q 021975 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI-LTSNLALVRADVC 229 (304)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~-~~~~i~~~~~d~~ 229 (304)
.....+.+...+...++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|+++....+.. ...++.+..+|+.
T Consensus 42 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~ 119 (293)
T 3thr_A 42 TAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF--SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL 119 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG
T ss_pred HHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh
Confidence 345556777777766788999999999999999999976 9999999999999999876433210 1246889999998
Q ss_pred CCC---CCCCccceEEec-chhccCCC-------HHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 230 RLP---FASGFVDAVHAG-AALHCWPS-------PSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 230 ~lp---~~~~~fD~V~~~-~vl~h~~d-------~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
.++ +++++||+|++. .+++|+++ +..+++++.++|||||++++.++..
T Consensus 120 ~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 120 TLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNY 178 (293)
T ss_dssp GHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred hCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCH
Confidence 877 778999999998 89999999 8999999999999999999988653
No 42
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.75 E-value=9.3e-18 Score=141.57 Aligned_cols=108 Identities=20% Similarity=0.347 Sum_probs=94.4
Q ss_pred cCCCeEEEEcCCccHH-HHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEe
Q 021975 165 AQGGLLVDVSCGSGLF-SRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~-~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (304)
.++.+|||+|||+|.+ ...++..+. +++|+|+|+.+++.++++....+ .++.++++|+.++++++++||+|++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~ 95 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGY--KTYGIEISDLQLKKAENFSRENN----FKLNISKGDIRKLPFKDESMSFVYS 95 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTC--EEEEEECCHHHHHHHHHHHHHHT----CCCCEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHhcC----CceEEEECchhhCCCCCCceeEEEE
Confidence 4578999999999997 455555554 99999999999999999887654 5789999999999988899999999
Q ss_pred cchhccC--CCHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 244 GAALHCW--PSPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 244 ~~vl~h~--~d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
..+++|+ .++..+++++.++|||||++++.++...
T Consensus 96 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 96 YGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp CSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred cChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEeccc
Confidence 9999999 5778999999999999999999998753
No 43
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.75 E-value=1.2e-17 Score=144.19 Aligned_cols=114 Identities=27% Similarity=0.352 Sum_probs=100.2
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (304)
..+...+...++.+|||||||+|.++..+++.+. .+++|+|+++.+++.++++... .++.++++|+..+++++
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~d~~~~~~~~ 105 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPD------TGITYERADLDKLHLPQ 105 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCS------SSEEEEECCGGGCCCCT
T ss_pred HHHHHhccccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhccc------CCceEEEcChhhccCCC
Confidence 3455666666788999999999999999998853 4899999999999999986532 36899999999888888
Q ss_pred CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
++||+|++..+++|++++..+++++.++|||||++++.++.
T Consensus 106 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 106 DSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 99999999999999999999999999999999999998865
No 44
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.75 E-value=1.3e-17 Score=141.35 Aligned_cols=110 Identities=20% Similarity=0.228 Sum_probs=96.4
Q ss_pred HHHhhc-ccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCC
Q 021975 158 AQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (304)
Q Consensus 158 l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~ 236 (304)
+...+. ..++.+|||||||+|.++..+++.+. +++|+|+++.+++.+++ . ...++.++++|+.++ ++++
T Consensus 37 ~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~----~---~~~~~~~~~~d~~~~-~~~~ 106 (218)
T 3ou2_A 37 ALERLRAGNIRGDVLELASGTGYWTRHLSGLAD--RVTALDGSAEMIAEAGR----H---GLDNVEFRQQDLFDW-TPDR 106 (218)
T ss_dssp HHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHGG----G---CCTTEEEEECCTTSC-CCSS
T ss_pred HHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHh----c---CCCCeEEEecccccC-CCCC
Confidence 344443 44567999999999999999999965 99999999999999988 2 236899999999887 6789
Q ss_pred ccceEEecchhccCCCH--HHHHHHHHHhcccCcEEEEEEeCC
Q 021975 237 FVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 237 ~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+||+|++..+++|++++ ..+++++.++|||||++++.++..
T Consensus 107 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 107 QWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred ceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 99999999999999987 789999999999999999999876
No 45
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.74 E-value=1.5e-17 Score=142.04 Aligned_cols=114 Identities=26% Similarity=0.389 Sum_probs=98.6
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (304)
+.+...+.. +.+|||+|||+|.++..+++.++ +++|+|+++.+++.++++.+..+ .++.++++|+.++++++
T Consensus 30 ~~l~~~~~~--~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~~~ 101 (227)
T 1ve3_A 30 PLLMKYMKK--RGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRE----SNVEFIVGDARKLSFED 101 (227)
T ss_dssp HHHHHSCCS--CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CCCEEEECCTTSCCSCT
T ss_pred HHHHHhcCC--CCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC----CCceEEECchhcCCCCC
Confidence 344444433 77999999999999999999987 99999999999999999887654 68999999999988888
Q ss_pred CccceEEecch--hccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 236 GFVDAVHAGAA--LHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 236 ~~fD~V~~~~v--l~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++||+|++..+ ++|..++..+++++.++|||||++++.++..
T Consensus 102 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 102 KTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp TCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecCh
Confidence 89999999999 5555677899999999999999999998763
No 46
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.74 E-value=2.5e-17 Score=145.75 Aligned_cols=139 Identities=12% Similarity=0.031 Sum_probs=107.5
Q ss_pred hhhHHHHHhHHHhhhcC--------CCCCcHH---HHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeC
Q 021975 130 FVSFLYERGWRQNFNRS--------GFPGPDE---EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDF 198 (304)
Q Consensus 130 ~~s~~~~~~w~~~~~~~--------~~~~~~~---~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~ 198 (304)
.....++..|.+.+... .++..+. +.+.....+...++.+|||||||+|.++..+..+.++++|+|+|+
T Consensus 75 ~~~~~~E~~wa~~l~~~~~p~~~l~~fpy~~~~~~l~~~E~~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDi 154 (298)
T 3fpf_A 75 NLGMKLEMEKAQEVIESDSPWETLRSFYFYPRYLELLKNEAALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEI 154 (298)
T ss_dssp HHHHHHHHHHHHHHHHCSSHHHHHHTSTTHHHHHHHHHHHHHHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEES
T ss_pred HHHHHHHHHHHHHHhccCChHHhhccCCCcccHHHHHHHHHHHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEEC
Confidence 34456788888877332 2333333 222222345567889999999999987655444434569999999
Q ss_pred CHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 199 SENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 199 s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
++.+++.|+++++..+ . .++.++++|+.+++ +++||+|++... ++++..+++++.++|||||+|++....
T Consensus 155 s~~~l~~Ar~~~~~~g--l-~~v~~v~gDa~~l~--d~~FDvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 155 EPDIAELSRKVIEGLG--V-DGVNVITGDETVID--GLEFDVLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp SHHHHHHHHHHHHHHT--C-CSEEEEESCGGGGG--GCCCSEEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHhcC--C-CCeEEEECchhhCC--CCCcCEEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 9999999999998877 3 78999999998876 789999998654 578999999999999999999998754
No 47
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.74 E-value=4.3e-18 Score=139.14 Aligned_cols=105 Identities=16% Similarity=0.317 Sum_probs=94.6
Q ss_pred hhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccce
Q 021975 161 YFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDA 240 (304)
Q Consensus 161 ~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~ 240 (304)
.+...++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++ ..++.++.+| +++++++||+
T Consensus 12 ~~~~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~--------~~~v~~~~~d---~~~~~~~~D~ 78 (170)
T 3i9f_A 12 NIFEGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEK--------FDSVITLSDP---KEIPDNSVDF 78 (170)
T ss_dssp HHHSSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHH--------CTTSEEESSG---GGSCTTCEEE
T ss_pred hcCcCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHh--------CCCcEEEeCC---CCCCCCceEE
Confidence 34455678999999999999999999885 999999999999999986 2578999999 6777899999
Q ss_pred EEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 241 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 241 V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
|++..+++|++++..+++++.++|||||++++.++...
T Consensus 79 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 79 ILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKE 116 (170)
T ss_dssp EEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred EEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 99999999999999999999999999999999998764
No 48
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.74 E-value=2.8e-17 Score=148.02 Aligned_cols=116 Identities=16% Similarity=0.246 Sum_probs=101.5
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 234 (304)
+.+.+.+...++.+|||||||+|.++..+++. +. +|+|+|+|+.+++.++++.+..+ ...++.++.+|+.+++
T Consensus 80 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~-- 153 (318)
T 2fk8_A 80 DLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV--NVIGLTLSKNQHARCEQVLASID--TNRSRQVLLQGWEDFA-- 153 (318)
T ss_dssp HHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHTSC--CSSCEEEEESCGGGCC--
T ss_pred HHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CCCceEEEECChHHCC--
Confidence 44555556667889999999999999999988 54 99999999999999999988776 3467999999998775
Q ss_pred CCccceEEecchhccC--CCHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 235 SGFVDAVHAGAALHCW--PSPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 235 ~~~fD~V~~~~vl~h~--~d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
++||+|++..+++|+ .++..+++++.++|||||++++.++...
T Consensus 154 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 154 -EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp -CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred -CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 789999999999999 5788999999999999999999998764
No 49
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.74 E-value=1.2e-17 Score=144.53 Aligned_cols=108 Identities=12% Similarity=0.167 Sum_probs=96.4
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEecc
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 245 (304)
++.+|||||||+|.++..+++.+ ..+++|+|+++.+++.+++++...+ ..++.++.+|+..+++++++||+|++..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 154 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEG---KRVRNYFCCGLQDFTPEPDSYDVIWIQW 154 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGG---GGEEEEEECCGGGCCCCSSCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcC---CceEEEEEcChhhcCCCCCCEEEEEEcc
Confidence 57899999999999999998886 4599999999999999999887653 2568999999998888888999999999
Q ss_pred hhccCCCHH--HHHHHHHHhcccCcEEEEEEeCC
Q 021975 246 ALHCWPSPS--NAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 246 vl~h~~d~~--~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+++|++++. .+++++.++|||||++++.++..
T Consensus 155 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 188 (241)
T 2ex4_A 155 VIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMA 188 (241)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccC
Confidence 999999865 89999999999999999988754
No 50
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.74 E-value=2.2e-17 Score=139.51 Aligned_cols=117 Identities=21% Similarity=0.293 Sum_probs=99.2
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC
Q 021975 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (304)
Q Consensus 153 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp 232 (304)
...+.+...+ .++.+|||+|||+|.++..+++.++. +++|+|+++.+++.++++... ..++.++.+|+..++
T Consensus 31 ~~~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~-----~~~i~~~~~d~~~~~ 102 (215)
T 2pxx_A 31 SFRALLEPEL--RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAH-----VPQLRWETMDVRKLD 102 (215)
T ss_dssp HHHHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTT-----CTTCEEEECCTTSCC
T ss_pred HHHHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhccc-----CCCcEEEEcchhcCC
Confidence 3444454444 45789999999999999999998743 899999999999999997653 257999999999988
Q ss_pred CCCCccceEEecchhccCC---------------CHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 233 FASGFVDAVHAGAALHCWP---------------SPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~---------------d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+++++||+|++..+++|+. ++..+++++.++|||||++++.++..
T Consensus 103 ~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 103 FPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp SCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 8889999999999987765 56789999999999999999999876
No 51
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.74 E-value=1.6e-17 Score=153.69 Aligned_cols=114 Identities=22% Similarity=0.318 Sum_probs=100.0
Q ss_pred ccCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhc-----CccCCCCeEEEEccCCCC------
Q 021975 164 SAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQD-----NTILTSNLALVRADVCRL------ 231 (304)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~-----~~~~~~~i~~~~~d~~~l------ 231 (304)
..++.+|||||||+|.++..+++. ++..+|+|+|+|+.+++.|+++++.. +.....++.++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 446789999999999999999887 35679999999999999999987643 200236899999999987
Q ss_pred CCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++++++||+|++..+++|++++..+++++.++|||||+|++.++..
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 8889999999999999999999999999999999999999988665
No 52
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.74 E-value=9.3e-18 Score=149.52 Aligned_cols=111 Identities=9% Similarity=0.032 Sum_probs=86.8
Q ss_pred cCCCeEEEEcCCccHHHH----HHHHhCCCCeE--EEEeCCHHHHHHHHHHHHhcCccCCCCe--EEEEccCCCCC----
Q 021975 165 AQGGLLVDVSCGSGLFSR----KFAKSGTYSGV--VALDFSENMLRQCYDFIKQDNTILTSNL--ALVRADVCRLP---- 232 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~----~l~~~~~~~~v--~giD~s~~~~~~a~~~~~~~~~~~~~~i--~~~~~d~~~lp---- 232 (304)
.++.+|||||||+|.++. .+...++...+ +|+|+|+.|++.|+++++... ...++ .+..+++++++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTS--NLENVKFAWHKETSSEYQSRML 128 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCS--SCTTEEEEEECSCHHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhcc--CCCcceEEEEecchhhhhhhhc
Confidence 356789999999997654 34444455544 999999999999999886532 12344 44555655443
Q ss_pred --CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 233 --FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 233 --~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+++++||+|++.+++||++|+..+|++++++|||||+|++.....
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred cccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 567899999999999999999999999999999999999987654
No 53
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.74 E-value=3.2e-17 Score=144.28 Aligned_cols=120 Identities=17% Similarity=0.215 Sum_probs=102.4
Q ss_pred HHHHhhcccCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHH------HHHHHHHHHHhcCccCCCCeEEEEcc--
Q 021975 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSEN------MLRQCYDFIKQDNTILTSNLALVRAD-- 227 (304)
Q Consensus 157 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~------~~~~a~~~~~~~~~~~~~~i~~~~~d-- 227 (304)
.+.+.+...++.+|||||||+|.++..+++. ++..+|+|+|+|+. +++.++++++..+ ...++.++.+|
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~ 111 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP--LGDRLTVHFNTNL 111 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST--TGGGEEEECSCCT
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC--CCCceEEEECChh
Confidence 4455556667889999999999999999988 55579999999997 9999999988765 34689999998
Q ss_pred -CCCCCCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 228 -VCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 228 -~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
...+|+++++||+|++..+++|++++..+++.+.++++|||++++.++...
T Consensus 112 ~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 112 SDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp TTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred hhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 456677789999999999999999999988888888888999999998764
No 54
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.74 E-value=9.7e-18 Score=145.71 Aligned_cols=114 Identities=10% Similarity=0.023 Sum_probs=98.2
Q ss_pred HHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCc
Q 021975 158 AQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGF 237 (304)
Q Consensus 158 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~ 237 (304)
+...+...++.+|||||||+|.++..+++.+ ..+++|+|+++.+++.++++.... .++.++++|+..+++++++
T Consensus 85 ~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~~~~~~ 158 (254)
T 1xtp_A 85 FIASLPGHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM-----PVGKFILASMETATLPPNT 158 (254)
T ss_dssp HHHTSTTCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS-----SEEEEEESCGGGCCCCSSC
T ss_pred HHHhhcccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC-----CceEEEEccHHHCCCCCCC
Confidence 3334444567899999999999999999886 458999999999999999976532 5799999999998888899
Q ss_pred cceEEecchhccCC--CHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 238 VDAVHAGAALHCWP--SPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 238 fD~V~~~~vl~h~~--d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
||+|++..+++|++ ++..+++++.++|||||++++.++..
T Consensus 159 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 200 (254)
T 1xtp_A 159 YDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCS 200 (254)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred eEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 99999999999995 47899999999999999999998643
No 55
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.74 E-value=1.3e-16 Score=134.51 Aligned_cols=121 Identities=19% Similarity=0.103 Sum_probs=103.5
Q ss_pred CcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCC
Q 021975 150 GPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (304)
Q Consensus 150 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~ 229 (304)
...+....+...+...++.+|||+|||+|.++..+++.++..+++|+|+++.+++.++++++..+ ..++.++.+|+.
T Consensus 24 ~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~ 100 (204)
T 3e05_A 24 TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFV---ARNVTLVEAFAP 100 (204)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHT---CTTEEEEECCTT
T ss_pred ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhC---CCcEEEEeCChh
Confidence 34455566777777778899999999999999999999877799999999999999999998876 268999999996
Q ss_pred CCCCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 230 RLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 230 ~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+......+||+|++..+++ ++..+++++.++|||||++++.+..
T Consensus 101 ~~~~~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 101 EGLDDLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp TTCTTSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred hhhhcCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 6543347899999988775 7889999999999999999998765
No 56
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.73 E-value=1.5e-17 Score=143.53 Aligned_cols=118 Identities=17% Similarity=0.197 Sum_probs=100.4
Q ss_pred HHHHHHHHhhccc--CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC
Q 021975 153 EEFKMAQEYFKSA--QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (304)
Q Consensus 153 ~~~~~l~~~l~~~--~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (304)
...+.+.+.+... ++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++....+ .++.++++|+..
T Consensus 22 ~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~~~~~D~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~ 95 (246)
T 1y8c_A 22 KWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFK--NTWAVDLSQEMLSEAENKFRSQG----LKPRLACQDISN 95 (246)
T ss_dssp HHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSS--EEEEECSCHHHHHHHHHHHHHTT----CCCEEECCCGGG
T ss_pred HHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCC--cEEEEECCHHHHHHHHHHHhhcC----CCeEEEeccccc
Confidence 3444555555443 678999999999999999999876 99999999999999999887755 379999999998
Q ss_pred CCCCCCccceEEecc-hhccC---CCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 231 LPFASGFVDAVHAGA-ALHCW---PSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 231 lp~~~~~fD~V~~~~-vl~h~---~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++++ ++||+|++.. +++|+ .++..+++++.++|||||++++.++..
T Consensus 96 ~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 96 LNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp CCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCH
Confidence 8876 8899999998 99999 466789999999999999999977643
No 57
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.73 E-value=8.8e-18 Score=145.22 Aligned_cols=112 Identities=14% Similarity=0.245 Sum_probs=95.5
Q ss_pred HHHHHHHHhhcc-cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC
Q 021975 153 EEFKMAQEYFKS-AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (304)
Q Consensus 153 ~~~~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (304)
...+.+..++.. .++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.+++ ++.++.+|+.+.
T Consensus 27 ~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~-----------~~~~~~~d~~~~ 93 (240)
T 3dli_A 27 LVKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEEGI--ESIGVDINEDMIKFCEG-----------KFNVVKSDAIEY 93 (240)
T ss_dssp HHHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHHTC--CEEEECSCHHHHHHHHT-----------TSEEECSCHHHH
T ss_pred HHHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCCC--cEEEEECCHHHHHHHHh-----------hcceeeccHHHH
Confidence 344445444442 3568999999999999999999876 89999999999999987 278889998775
Q ss_pred --CCCCCccceEEecchhccCCCH--HHHHHHHHHhcccCcEEEEEEeCC
Q 021975 232 --PFASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 232 --p~~~~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++++++||+|++..+++|++++ ..+++++.++|||||++++.++..
T Consensus 94 ~~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 143 (240)
T 3dli_A 94 LKSLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNP 143 (240)
T ss_dssp HHTSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECT
T ss_pred hhhcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence 7788999999999999999965 899999999999999999999865
No 58
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.73 E-value=2e-17 Score=148.28 Aligned_cols=111 Identities=16% Similarity=0.193 Sum_probs=98.9
Q ss_pred cCCCeEEEEcCCccHHHHHHH-HhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEe
Q 021975 165 AQGGLLVDVSCGSGLFSRKFA-KSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~-~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (304)
.++.+|||||||+|.++..++ ...+..+|+|+|+++.+++.++++++..+ ...++.++++|+.+++++ ++||+|++
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~-~~fD~v~~ 193 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA--LAGQITLHRQDAWKLDTR-EGYDLLTS 193 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST--TGGGEEEEECCGGGCCCC-SCEEEEEC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC--CCCceEEEECchhcCCcc-CCeEEEEE
Confidence 457899999999999999986 44556799999999999999999998776 345699999999999887 89999999
Q ss_pred cchhccCCCHHH---HHHHHHHhcccCcEEEEEEeCCC
Q 021975 244 GAALHCWPSPSN---AVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 244 ~~vl~h~~d~~~---~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
..+++|++++.. +++++.++|||||++++.++...
T Consensus 194 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 231 (305)
T 3ocj_A 194 NGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPP 231 (305)
T ss_dssp CSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCC
T ss_pred CChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCC
Confidence 999999999986 79999999999999999887653
No 59
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.72 E-value=5e-17 Score=144.11 Aligned_cols=110 Identities=15% Similarity=0.162 Sum_probs=96.7
Q ss_pred hhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccce
Q 021975 161 YFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDA 240 (304)
Q Consensus 161 ~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~ 240 (304)
.+...++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.++++....+ .++.++++|+..+++ +++||+
T Consensus 115 ~~~~~~~~~vLD~GcG~G~~~~~l~~~g~--~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~-~~~fD~ 187 (286)
T 3m70_A 115 AAKIISPCKVLDLGCGQGRNSLYLSLLGY--DVTSWDHNENSIAFLNETKEKEN----LNISTALYDINAANI-QENYDF 187 (286)
T ss_dssp HHHHSCSCEEEEESCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCGGGCCC-CSCEEE
T ss_pred HhhccCCCcEEEECCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHHcC----CceEEEEeccccccc-cCCccE
Confidence 33334678999999999999999999976 99999999999999999998876 389999999998877 789999
Q ss_pred EEecchhccCCCH--HHHHHHHHHhcccCcEEEEEEeCC
Q 021975 241 VHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 241 V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
|++..+++|++++ ..+++++.++|||||++++.....
T Consensus 188 i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 226 (286)
T 3m70_A 188 IVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMS 226 (286)
T ss_dssp EEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred EEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 9999999999654 489999999999999988877654
No 60
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.72 E-value=3.8e-17 Score=143.07 Aligned_cols=102 Identities=22% Similarity=0.263 Sum_probs=90.9
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEecc
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 245 (304)
++.+|||||||+|.++..+++.+. +++|+|+|+.+++.|+++. .++.++++|+.++++ +++||+|++..
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~-~~~fD~v~~~~ 118 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG--TVEGLELSADMLAIARRRN--------PDAVLHHGDMRDFSL-GRRFSAVTCMF 118 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS--EEEEEESCHHHHHHHHHHC--------TTSEEEECCTTTCCC-SCCEEEEEECT
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhC--------CCCEEEECChHHCCc-cCCcCEEEEcC
Confidence 467999999999999999999876 9999999999999999853 478999999999887 78999999998
Q ss_pred -hhccCC---CHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 246 -ALHCWP---SPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 246 -vl~h~~---d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
+++|++ +...+++++.++|||||+|++.++..+
T Consensus 119 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 155 (263)
T 3pfg_A 119 SSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFP 155 (263)
T ss_dssp TGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred chhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccCh
Confidence 999997 455789999999999999999866543
No 61
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.72 E-value=5.9e-17 Score=133.06 Aligned_cols=119 Identities=17% Similarity=0.189 Sum_probs=97.3
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC-
Q 021975 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR- 230 (304)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~- 230 (304)
.+....+...+...++.+|||+|||+|.++..+++..+..+++|+|+++.+++.++++++..+ ...++ ++.+|...
T Consensus 11 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~-~~~~d~~~~ 87 (178)
T 3hm2_A 11 QHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLG--VSDRI-AVQQGAPRA 87 (178)
T ss_dssp HHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTT--CTTSE-EEECCTTGG
T ss_pred HHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhC--CCCCE-EEecchHhh
Confidence 334455666666667889999999999999999998666799999999999999999998876 33478 88888754
Q ss_pred CCCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 231 LPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 231 lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++...++||+|++..+++| ..+++++.++|||||++++.+...
T Consensus 88 ~~~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 88 FDDVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp GGGCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSH
T ss_pred hhccCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeecc
Confidence 3332378999999999988 678999999999999999988654
No 62
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.72 E-value=9.2e-18 Score=141.04 Aligned_cols=104 Identities=17% Similarity=0.215 Sum_probs=91.5
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEecc
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 245 (304)
++ +|||||||+|.++..+++.+. +++|+|+++.+++.++++....+ .++.++++|+..+++++++||+|++..
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~ 102 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGY--EVTAVDQSSVGLAKAKQLAQEKG----VKITTVQSNLADFDIVADAWEGIVSIF 102 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHHT----CCEEEECCBTTTBSCCTTTCSEEEEEC
T ss_pred CC-CEEEECCCCCHhHHHHHhCCC--eEEEEECCHHHHHHHHHHHHhcC----CceEEEEcChhhcCCCcCCccEEEEEh
Confidence 35 999999999999999998865 99999999999999999987765 489999999999988889999999964
Q ss_pred hhccC--CCHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 246 ALHCW--PSPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 246 vl~h~--~d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
.|+ .++..+++++.++|||||++++.++...
T Consensus 103 --~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 103 --CHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp --CCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred --hcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 444 3667899999999999999999998753
No 63
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.71 E-value=4.2e-17 Score=138.01 Aligned_cols=101 Identities=24% Similarity=0.284 Sum_probs=91.2
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEecc
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 245 (304)
++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++. ++.++.+|+..++ .+++||+|++..
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~---------~~~~~~~d~~~~~-~~~~fD~v~~~~ 110 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGF--DVDATDGSPELAAEASRRL---------GRPVRTMLFHQLD-AIDAYDAVWAHA 110 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH---------TSCCEECCGGGCC-CCSCEEEEEECS
T ss_pred CCCcEEEECCCCCHHHHHHHHcCC--eEEEECCCHHHHHHHHHhc---------CCceEEeeeccCC-CCCcEEEEEecC
Confidence 478999999999999999999865 9999999999999999864 4567889998888 688999999999
Q ss_pred hhccCC--CHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 246 ALHCWP--SPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 246 vl~h~~--d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
+++|++ ++..+++++.++|||||++++..+...
T Consensus 111 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 145 (211)
T 3e23_A 111 CLLHVPRDELADVLKLIWRALKPGGLFYASYKSGE 145 (211)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCS
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCC
Confidence 999998 778999999999999999999987653
No 64
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.71 E-value=9.7e-17 Score=140.42 Aligned_cols=109 Identities=28% Similarity=0.373 Sum_probs=93.7
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (304)
+.+...+. ++.+|||||||+|.++..+++.+. +++|+|+|+.+++.++++.. . .++.+|+..+++++
T Consensus 46 ~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~--------~-~~~~~d~~~~~~~~ 112 (260)
T 2avn_A 46 SFLEEYLK--NPCRVLDLGGGTGKWSLFLQERGF--EVVLVDPSKEMLEVAREKGV--------K-NVVEAKAEDLPFPS 112 (260)
T ss_dssp HHHHHHCC--SCCEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHHTC--------S-CEEECCTTSCCSCT
T ss_pred HHHHHhcC--CCCeEEEeCCCcCHHHHHHHHcCC--eEEEEeCCHHHHHHHHhhcC--------C-CEEECcHHHCCCCC
Confidence 34444443 578999999999999999999865 99999999999999998642 1 28899999999888
Q ss_pred CccceEEecchhccC-CCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 236 GFVDAVHAGAALHCW-PSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~-~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++||+|++..+++|+ +++..+++++.++|||||++++.++..
T Consensus 113 ~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 113 GAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp TCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred CCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 999999999877766 789999999999999999999998765
No 65
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.70 E-value=6.8e-17 Score=144.29 Aligned_cols=122 Identities=16% Similarity=0.225 Sum_probs=98.8
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC
Q 021975 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (304)
Q Consensus 153 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp 232 (304)
.....+...+... +.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|+++....+.....++.++++|+.+++
T Consensus 70 ~~~~~~~~~~~~~-~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 146 (299)
T 3g2m_A 70 SEAREFATRTGPV-SGPVLELAAGMGRLTFPFLDLGW--EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA 146 (299)
T ss_dssp HHHHHHHHHHCCC-CSCEEEETCTTTTTHHHHHTTTC--CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC
T ss_pred HHHHHHHHhhCCC-CCcEEEEeccCCHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC
Confidence 3445555555543 44999999999999999999875 99999999999999999987654111157999999999988
Q ss_pred CCCCccceEEec-chhccCC--CHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 233 FASGFVDAVHAG-AALHCWP--SPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 233 ~~~~~fD~V~~~-~vl~h~~--d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
+ +++||+|++. .+++|++ +...+++++.++|||||+|++.++...
T Consensus 147 ~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 147 L-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp C-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred c-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 7 6899988865 6677665 347899999999999999999998763
No 66
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.70 E-value=1.1e-16 Score=142.12 Aligned_cols=110 Identities=21% Similarity=0.257 Sum_probs=96.4
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC-CCCccceEEe
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-ASGFVDAVHA 243 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~-~~~~fD~V~~ 243 (304)
.++.+|||||||+|.++..+++.+ ..+++|+|+++.+++.|+++....+ ...++.++++|+..+++ ++++||+|++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 139 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNMK--RRFKVFFRAQDSYGRHMDLGKEFDVISS 139 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHTSC--CSSEEEEEESCTTTSCCCCSSCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC--CCccEEEEECCccccccCCCCCcCEEEE
Confidence 457899999999999999988875 4599999999999999999988765 33579999999999887 5789999999
Q ss_pred cchhcc----CCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 244 GAALHC----WPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 244 ~~vl~h----~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
..++|| ..++..+++++.++|||||++++.++..
T Consensus 140 ~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 140 QFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp ESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 999977 4567889999999999999999998764
No 67
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.70 E-value=5.6e-16 Score=130.95 Aligned_cols=118 Identities=16% Similarity=0.176 Sum_probs=97.3
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC
Q 021975 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (304)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (304)
..+....+...+...++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|+++++..+ ...++.++.+|+.+
T Consensus 40 ~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~~--~v~~vD~s~~~~~~a~~~~~~~g--~~~~v~~~~~d~~~ 115 (204)
T 3njr_A 40 KSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLAGG--RAITIEPRADRIENIQKNIDTYG--LSPRMRAVQGTAPA 115 (204)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCTTG
T ss_pred cHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHcC--CCCCEEEEeCchhh
Confidence 344445666677777788999999999999999999844 99999999999999999998877 23489999999987
Q ss_pred CCCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 231 LPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 231 lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
.......||+|++..++ ++. +++++.++|||||++++.+...
T Consensus 116 ~~~~~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~ 157 (204)
T 3njr_A 116 ALADLPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTL 157 (204)
T ss_dssp GGTTSCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSH
T ss_pred hcccCCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCc
Confidence 33234579999987744 566 9999999999999999988653
No 68
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.70 E-value=7.4e-17 Score=144.51 Aligned_cols=111 Identities=15% Similarity=0.166 Sum_probs=87.2
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccC---CCCeEEEEccC------CCC--CCC
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTIL---TSNLALVRADV------CRL--PFA 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~---~~~i~~~~~d~------~~l--p~~ 234 (304)
++.+|||||||+|..+..++..+ ..+|+|+|+|+.|++.|+++....+... ..++.+.+.|+ .++ +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 46799999999998776666554 3499999999999999999886654100 01367888887 222 355
Q ss_pred CCccceEEecchhccC---CCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 235 SGFVDAVHAGAALHCW---PSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 235 ~~~fD~V~~~~vl~h~---~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+++||+|+|.+++||+ .+...+++++.++|||||+|++.++..
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDG 172 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 7899999999999886 355789999999999999999999865
No 69
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.70 E-value=4.3e-17 Score=145.34 Aligned_cols=109 Identities=19% Similarity=0.218 Sum_probs=90.7
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcc-----------------------------
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI----------------------------- 216 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~----------------------------- 216 (304)
++.+|||||||+|.++..+++..+..+|+|+|+++.+++.|+++++..+..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 578999999999999999999966679999999999999999986643310
Q ss_pred --------------------------CCCCeEEEEccCCCCC-----CCCCccceEEecchhccCC------CHHHHHHH
Q 021975 217 --------------------------LTSNLALVRADVCRLP-----FASGFVDAVHAGAALHCWP------SPSNAVAE 259 (304)
Q Consensus 217 --------------------------~~~~i~~~~~d~~~lp-----~~~~~fD~V~~~~vl~h~~------d~~~~l~~ 259 (304)
...++.|+++|+...+ +.+++||+|++..+++|+. ++..++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 0147999999997654 5678999999999998875 67789999
Q ss_pred HHHhcccCcEEEEEE
Q 021975 260 ISRILRSGGVFVGTT 274 (304)
Q Consensus 260 ~~r~LkpgG~lvi~~ 274 (304)
+.++|||||+|++..
T Consensus 206 ~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 206 IYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHEEEEEEEEEEC
T ss_pred HHHHhCCCcEEEEec
Confidence 999999999999864
No 70
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.70 E-value=1.2e-16 Score=133.19 Aligned_cols=123 Identities=19% Similarity=0.131 Sum_probs=100.1
Q ss_pred HHHHHHHHHhhcc---cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccC
Q 021975 152 DEEFKMAQEYFKS---AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV 228 (304)
Q Consensus 152 ~~~~~~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~ 228 (304)
+...+.+.+.+.. .++.+|||+|||+|.++..++..+ ..+|+|+|+++.+++.++++++..+ . .++.++++|+
T Consensus 27 ~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~--~-~~v~~~~~d~ 102 (189)
T 3p9n_A 27 DRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRG-AASVLFVESDQRSAAVIARNIEALG--L-SGATLRRGAV 102 (189)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEECCHHHHHHHHHHHHHHT--C-SCEEEEESCH
T ss_pred HHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHcC--C-CceEEEEccH
Confidence 3344444444432 467899999999999999887765 4589999999999999999998876 2 6899999999
Q ss_pred CCCC--CCCCccceEEecchhccC-CCHHHHHHHHHH--hcccCcEEEEEEeCCC
Q 021975 229 CRLP--FASGFVDAVHAGAALHCW-PSPSNAVAEISR--ILRSGGVFVGTTFLRY 278 (304)
Q Consensus 229 ~~lp--~~~~~fD~V~~~~vl~h~-~d~~~~l~~~~r--~LkpgG~lvi~~~~~~ 278 (304)
.+++ +++++||+|++...+++. .+...+++++.+ +|||||++++......
T Consensus 103 ~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 103 AAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp HHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred HHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 7753 446899999999887775 677889999999 9999999999887653
No 71
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.70 E-value=2e-16 Score=155.27 Aligned_cols=124 Identities=12% Similarity=0.149 Sum_probs=104.9
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCc---cCCCCeEEEEccC
Q 021975 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNT---ILTSNLALVRADV 228 (304)
Q Consensus 153 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~---~~~~~i~~~~~d~ 228 (304)
...+.+.+.+...++.+|||||||+|.++..+++.+ +..+|+|+|+++.+++.|++++..... ....++.++++|+
T Consensus 708 qRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa 787 (950)
T 3htx_A 708 QRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI 787 (950)
T ss_dssp HHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT
T ss_pred HHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch
Confidence 345566677776678899999999999999999987 446999999999999999997764310 0235799999999
Q ss_pred CCCCCCCCccceEEecchhccCCCHH--HHHHHHHHhcccCcEEEEEEeCC
Q 021975 229 CRLPFASGFVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 229 ~~lp~~~~~fD~V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
.++++.+++||+|++..+++|++++. .+++++.++|||| .+++.++..
T Consensus 788 ~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 788 LEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp TSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred HhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 99999889999999999999999877 5899999999999 888888765
No 72
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.69 E-value=3.9e-16 Score=137.93 Aligned_cols=107 Identities=17% Similarity=0.141 Sum_probs=92.5
Q ss_pred CCCeEEEEcCCc---cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC----------
Q 021975 166 QGGLLVDVSCGS---GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---------- 232 (304)
Q Consensus 166 ~~~~vLDiGcG~---G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---------- 232 (304)
...+|||||||+ |.++..+.+..+..+|+|+|+|+.|++.|++++.. ..++.++++|+.+.+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~-----~~~v~~~~~D~~~~~~~~~~~~~~~ 151 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK-----DPNTAVFTADVRDPEYILNHPDVRR 151 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-----CTTEEEEECCTTCHHHHHHSHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-----CCCeEEEEeeCCCchhhhccchhhc
Confidence 347999999999 99888887777777999999999999999998743 257999999997631
Q ss_pred -CCCCccceEEecchhccCCC--HHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 233 -FASGFVDAVHAGAALHCWPS--PSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 233 -~~~~~fD~V~~~~vl~h~~d--~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++..+||+|++..+|||+++ +..+++++.++|||||+|++.++..
T Consensus 152 ~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 152 MIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred cCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 22348999999999999997 8899999999999999999999875
No 73
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.69 E-value=1.6e-16 Score=135.57 Aligned_cols=107 Identities=17% Similarity=0.260 Sum_probs=93.0
Q ss_pred HHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC--CCCCC
Q 021975 158 AQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR--LPFAS 235 (304)
Q Consensus 158 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~--lp~~~ 235 (304)
+.+.+. .++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.++++ ...++.+|+.+ .++++
T Consensus 25 l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~~~~~~~~~~~~----------~~~~~~~d~~~~~~~~~~ 91 (230)
T 3cc8_A 25 LLKHIK-KEWKEVLDIGCSSGALGAAIKENG--TRVSGIEAFPEAAEQAKEK----------LDHVVLGDIETMDMPYEE 91 (230)
T ss_dssp HHTTCC-TTCSEEEEETCTTSHHHHHHHTTT--CEEEEEESSHHHHHHHHTT----------SSEEEESCTTTCCCCSCT
T ss_pred HHHHhc-cCCCcEEEeCCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHh----------CCcEEEcchhhcCCCCCC
Confidence 444444 467899999999999999999885 5999999999999999873 23688999876 66778
Q ss_pred CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++||+|++..+++|++++..+++++.++|||||++++.++..
T Consensus 92 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 133 (230)
T 3cc8_A 92 EQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNV 133 (230)
T ss_dssp TCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECT
T ss_pred CccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 899999999999999999999999999999999999998764
No 74
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.69 E-value=3.9e-17 Score=141.20 Aligned_cols=105 Identities=12% Similarity=0.221 Sum_probs=90.9
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC--CCCCCccceEE
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVH 242 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p~~~~~fD~V~ 242 (304)
.++++|||||||+|..+..+++..+ .+++|||+++.+++.|+++.+..+ .++.++.+|+..+ ++++++||.|+
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~~----~~~~~~~~~a~~~~~~~~~~~FD~i~ 133 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQT----HKVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGCS----SEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhCC----CceEEEeehHHhhcccccccCCceEE
Confidence 4688999999999999999988764 489999999999999999888765 6788999887653 47788999997
Q ss_pred e-----cchhccCCCHHHHHHHHHHhcccCcEEEEEE
Q 021975 243 A-----GAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 243 ~-----~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
. ..+++|++++..+++++.|+|||||+|++..
T Consensus 134 ~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred EeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 4 5678889999999999999999999998764
No 75
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.68 E-value=2.5e-16 Score=135.74 Aligned_cols=113 Identities=21% Similarity=0.294 Sum_probs=95.6
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC
Q 021975 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (304)
Q Consensus 154 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 233 (304)
..+.+...+.. +.+|||+|||+|.++..+++. . +++|+|+++.+++.|+++....+ .++.++++|+.++++
T Consensus 23 ~~~~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~-~--~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~ 93 (243)
T 3d2l_A 23 WVAWVLEQVEP--GKRIADIGCGTGTATLLLADH-Y--EVTGVDLSEEMLEIAQEKAMETN----RHVDFWVQDMRELEL 93 (243)
T ss_dssp HHHHHHHHSCT--TCEEEEESCTTCHHHHHHTTT-S--EEEEEESCHHHHHHHHHHHHHTT----CCCEEEECCGGGCCC
T ss_pred HHHHHHHHcCC--CCeEEEecCCCCHHHHHHhhC-C--eEEEEECCHHHHHHHHHhhhhcC----CceEEEEcChhhcCC
Confidence 34455555543 589999999999999999887 4 99999999999999999887654 579999999988877
Q ss_pred CCCccceEEecc-hhccCC---CHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 234 ASGFVDAVHAGA-ALHCWP---SPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 234 ~~~~fD~V~~~~-vl~h~~---d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+ ++||+|++.. +++|+. ++..+++++.++|||||++++.++.
T Consensus 94 ~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 94 P-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp S-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred C-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 5 7899999986 999994 4567899999999999999987654
No 76
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.68 E-value=4.8e-17 Score=140.32 Aligned_cols=107 Identities=13% Similarity=0.229 Sum_probs=88.9
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC--CCCCCccceEE
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVH 242 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p~~~~~fD~V~ 242 (304)
.++.+|||||||+|.++..+++.+. .+|+|+|+|+.+++.|+++.+..+ .++.++++|+.++ ++++++||+|+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~fD~V~ 133 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQT----HKVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCS----SEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcC----CCeEEEecCHHHhhcccCCCceEEEE
Confidence 4577999999999999999977653 489999999999999999887654 6799999999887 88889999999
Q ss_pred e-cchh--c--cCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 243 A-GAAL--H--CWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 243 ~-~~vl--~--h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+ .+.+ + |..+...+++++.++|||||+|++.++.
T Consensus 134 ~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred ECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 9 5543 1 2223447799999999999999987654
No 77
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.68 E-value=5.7e-16 Score=128.45 Aligned_cols=119 Identities=14% Similarity=0.218 Sum_probs=100.9
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCC--eEEEEccCCC
Q 021975 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSN--LALVRADVCR 230 (304)
Q Consensus 153 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~--i~~~~~d~~~ 230 (304)
...+.+.+.+...++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.+++++...+. .+ +.++.+|+.+
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~---~~~~~~~~~~d~~~ 113 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADEV--KSTTMADINRRAIKLAKENIKLNNL---DNYDIRVVHSDLYE 113 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTTC---TTSCEEEEECSTTT
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHcCC---CccceEEEECchhc
Confidence 445666677766678899999999999999999884 4999999999999999999887662 33 9999999977
Q ss_pred CCCCCCccceEEecchhcc-CCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 231 LPFASGFVDAVHAGAALHC-WPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 231 lp~~~~~fD~V~~~~vl~h-~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++++++||+|++..+++| ..+...+++++.++|||||++++.++..
T Consensus 114 -~~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 114 -NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp -TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred -ccccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 445778999999988887 3466789999999999999999999875
No 78
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.68 E-value=2e-16 Score=131.09 Aligned_cols=108 Identities=19% Similarity=0.184 Sum_probs=86.3
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-CCCCccceEEe
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FASGFVDAVHA 243 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~~~~~fD~V~~ 243 (304)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++++..+ . .++.+++.+...++ +.+++||+|++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~~--~v~~vD~s~~~l~~a~~~~~~~~--~-~~v~~~~~~~~~l~~~~~~~fD~v~~ 95 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLSK--KVYAFDVQEQALGKTSQRLSDLG--I-ENTELILDGHENLDHYVREPIRAAIF 95 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTSS--EEEEEESCHHHHHHHHHHHHHHT--C-CCEEEEESCGGGGGGTCCSCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcC--C-CcEEEEeCcHHHHHhhccCCcCEEEE
Confidence 3578999999999999999998854 99999999999999999998876 2 78999998877643 44778999988
Q ss_pred cc-hhcc--------CCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 244 GA-ALHC--------WPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 244 ~~-vl~h--------~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
.. .+++ ..+...+++++.++|||||++++..+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 96 NLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp EEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred eCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 73 3332 1233578899999999999999988754
No 79
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.68 E-value=8.9e-16 Score=141.27 Aligned_cols=117 Identities=11% Similarity=0.127 Sum_probs=101.9
Q ss_pred HHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCc
Q 021975 158 AQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGF 237 (304)
Q Consensus 158 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~ 237 (304)
+.+.+...+..+|||||||+|.++..+++.++..+++++|+ +.+++.+++++...+ ...++.++.+|+. .+++. .
T Consensus 194 l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--l~~~v~~~~~d~~-~~~p~-~ 268 (369)
T 3gwz_A 194 VAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRG--LADRCEILPGDFF-ETIPD-G 268 (369)
T ss_dssp HHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT--CTTTEEEEECCTT-TCCCS-S
T ss_pred HHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcC--cCCceEEeccCCC-CCCCC-C
Confidence 34444445678999999999999999999988889999999 999999999988776 4578999999998 46655 8
Q ss_pred cceEEecchhccCCCHH--HHHHHHHHhcccCcEEEEEEeCCCC
Q 021975 238 VDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYT 279 (304)
Q Consensus 238 fD~V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~lvi~~~~~~~ 279 (304)
||+|++.+++||++++. .++++++++|||||+|++.++....
T Consensus 269 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 269 ADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred ceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 99999999999999886 7999999999999999999987654
No 80
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.68 E-value=1.1e-16 Score=138.54 Aligned_cols=105 Identities=16% Similarity=0.109 Sum_probs=92.8
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC-----Cccc
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS-----GFVD 239 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~-----~~fD 239 (304)
.++.+|||+|||+|.++..+++.++ +|+|+|+|+.+++.++++.. ..++.++++|+.++++.. ..||
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~d 126 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT------AANISYRLLDGLVPEQAAQIHSEIGDA 126 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC------CTTEEEEECCTTCHHHHHHHHHHHCSC
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc------ccCceEEECcccccccccccccccCcc
Confidence 4578999999999999999999987 99999999999999999762 247999999998865432 2489
Q ss_pred eEEecchhccCC--CHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 240 AVHAGAALHCWP--SPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 240 ~V~~~~vl~h~~--d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+|++..+++|++ ++..+++++.++|||||++++.++..
T Consensus 127 ~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 127 NIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp EEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred EEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 999999999999 88999999999999999999998865
No 81
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.68 E-value=8.5e-17 Score=141.23 Aligned_cols=113 Identities=21% Similarity=0.363 Sum_probs=87.4
Q ss_pred ccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccC--------------------------
Q 021975 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTIL-------------------------- 217 (304)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~-------------------------- 217 (304)
..++.+|||||||+|.+...++..+. .+|+|+|+|+.|++.|+++++......
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~-~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhh-cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 34677899999999988777766652 379999999999999998765432000
Q ss_pred CCCeE-EEEccCCCC-CC---CCCccceEEecchhccC----CCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 218 TSNLA-LVRADVCRL-PF---ASGFVDAVHAGAALHCW----PSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 218 ~~~i~-~~~~d~~~l-p~---~~~~fD~V~~~~vl~h~----~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
..++. ++++|+.+. |+ ..++||+|++.++|||+ ++...+++++.++|||||+|++.+...
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~ 200 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLR 200 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESS
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeec
Confidence 01243 889999873 43 25789999999999996 344689999999999999999998644
No 82
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.68 E-value=7e-16 Score=141.67 Aligned_cols=110 Identities=14% Similarity=0.145 Sum_probs=97.5
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC--CCCCCccceEE
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVH 242 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p~~~~~fD~V~ 242 (304)
....+|||||||+|.++..+++.++..+++++|+ +.+++.|+++++..+ ...++.++.+|+.+. |++ ++||+|+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~p-~~~D~v~ 253 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLS--GSERIHGHGANLLDRDVPFP-TGFDAVW 253 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCT--TGGGEEEEECCCCSSSCCCC-CCCSEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcC--cccceEEEEccccccCCCCC-CCcCEEE
Confidence 3567999999999999999999988889999999 999999999988766 346899999999875 465 7899999
Q ss_pred ecchhccCCCHH--HHHHHHHHhcccCcEEEEEEeCCC
Q 021975 243 AGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 243 ~~~vl~h~~d~~--~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
+.++|||++++. .+|++++++|||||+|++.+....
T Consensus 254 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 254 MSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp EESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred EechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 999999998774 789999999999999999987654
No 83
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.68 E-value=2.7e-16 Score=135.22 Aligned_cols=103 Identities=24% Similarity=0.352 Sum_probs=90.3
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEe-
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA- 243 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~- 243 (304)
.++.+|||+|||+|.++..+++.++ +++|+|+|+.+++.++++. .++.++.+|+.++++ +++||+|++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~-~~~~D~v~~~ 107 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL--------PDATLHQGDMRDFRL-GRKFSAVVSM 107 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC--------TTCEEEECCTTTCCC-SSCEEEEEEC
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC--------CCCEEEECCHHHccc-CCCCcEEEEc
Confidence 4578999999999999999999986 9999999999999999853 568999999998887 678999995
Q ss_pred cchhccCCCH---HHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 244 GAALHCWPSP---SNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 244 ~~vl~h~~d~---~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
..+++|++++ ..+++++.++|||||++++.++...
T Consensus 108 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 108 FSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred CchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 5599999654 6899999999999999999876653
No 84
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.68 E-value=5.2e-16 Score=131.15 Aligned_cols=113 Identities=18% Similarity=0.118 Sum_probs=98.4
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC
Q 021975 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (304)
Q Consensus 153 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp 232 (304)
.....+.+.+...++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.++++++..+ ..++.++.+|+...+
T Consensus 64 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~ 138 (210)
T 3lbf_A 64 YMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQ--HVCSVERIKGLQWQARRRLKNLD---LHNVSTRHGDGWQGW 138 (210)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCGGGCC
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhCC--EEEEEecCHHHHHHHHHHHHHcC---CCceEEEECCcccCC
Confidence 4455666677777789999999999999999999865 99999999999999999998876 257999999998866
Q ss_pred CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
..+++||+|++..+++|+++ ++.++|||||++++....
T Consensus 139 ~~~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 139 QARAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GGGCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred ccCCCccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 66789999999999999986 588999999999998876
No 85
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.67 E-value=4.3e-16 Score=141.17 Aligned_cols=110 Identities=19% Similarity=0.176 Sum_probs=97.1
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEec
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (304)
.+..+|||||||+|.++..+++..+..+++++|+ +.+++.+++++...+ ...++.++.+|+. .+++. +||+|++.
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~-~~~p~-~~D~v~~~ 242 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTG--LSGRAQVVVGSFF-DPLPA-GAGGYVLS 242 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT--CTTTEEEEECCTT-SCCCC-SCSEEEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcC--cCcCeEEecCCCC-CCCCC-CCcEEEEe
Confidence 3467999999999999999999988889999999 999999999988776 4578999999997 45555 89999999
Q ss_pred chhccCCCH--HHHHHHHHHhcccCcEEEEEEeCCCC
Q 021975 245 AALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYT 279 (304)
Q Consensus 245 ~vl~h~~d~--~~~l~~~~r~LkpgG~lvi~~~~~~~ 279 (304)
+++||++++ ..++++++++|||||+|++.++....
T Consensus 243 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 243 AVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred hhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 999999987 78999999999999999999876543
No 86
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.67 E-value=3.7e-16 Score=133.17 Aligned_cols=95 Identities=21% Similarity=0.302 Sum_probs=87.7
Q ss_pred CCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEecch
Q 021975 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAA 246 (304)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~v 246 (304)
+.+|||+|||+|.++..++.. +|+|+++.+++.++++ ++.++.+|+..+++++++||+|++..+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~----------~~~~~~~d~~~~~~~~~~fD~v~~~~~ 111 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR----------GVFVLKGTAENLPLKDESFDFALMVTT 111 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT----------TCEEEECBTTBCCSCTTCEEEEEEESC
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc----------CCEEEEcccccCCCCCCCeeEEEEcch
Confidence 779999999999999888654 9999999999999882 688999999998888889999999999
Q ss_pred hccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 247 LHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 247 l~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++|++++..+++++.++|||||++++.++..
T Consensus 112 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 112 ICFVDDPERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp GGGSSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred HhhccCHHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 9999999999999999999999999998765
No 87
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.67 E-value=1.1e-15 Score=140.06 Aligned_cols=119 Identities=15% Similarity=0.127 Sum_probs=102.5
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (304)
+.+.+.+...++.+|||||||+|.++..+++..+..+++++|+ +.+++.++++++..+ ...++.++.+|+.+.++++
T Consensus 180 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~ 256 (359)
T 1x19_A 180 QLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKG--VADRMRGIAVDIYKESYPE 256 (359)
T ss_dssp HHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT--CTTTEEEEECCTTTSCCCC
T ss_pred HHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcC--CCCCEEEEeCccccCCCCC
Confidence 3444555555678999999999999999999988889999999 999999999988776 3456999999999877664
Q ss_pred CccceEEecchhccCCC--HHHHHHHHHHhcccCcEEEEEEeCCCC
Q 021975 236 GFVDAVHAGAALHCWPS--PSNAVAEISRILRSGGVFVGTTFLRYT 279 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d--~~~~l~~~~r~LkpgG~lvi~~~~~~~ 279 (304)
. |+|++..++||+++ ...+++++.++|||||++++.++....
T Consensus 257 ~--D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 300 (359)
T 1x19_A 257 A--DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDD 300 (359)
T ss_dssp C--SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCC
T ss_pred C--CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCC
Confidence 3 99999999999998 678999999999999999999877543
No 88
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.67 E-value=9.6e-16 Score=130.18 Aligned_cols=107 Identities=21% Similarity=0.244 Sum_probs=92.1
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC--CCCCccceEEe
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--FASGFVDAVHA 243 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--~~~~~fD~V~~ 243 (304)
++.+|||||||+|.++..+++..+..+++|+|+++.+++.|+++++..+ ..++.++++|+..++ +++++||+|++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVG---VPNIKLLWVDGSDLTDYFEDGEIDRLYL 117 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC---CSSEEEEECCSSCGGGTSCTTCCSEEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcC---CCCEEEEeCCHHHHHhhcCCCCCCEEEE
Confidence 4679999999999999999999877899999999999999999998876 268999999999877 77889999999
Q ss_pred cchhccCC--------CHHHHHHHHHHhcccCcEEEEEEe
Q 021975 244 GAALHCWP--------SPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 244 ~~vl~h~~--------d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
.+...+.. ....+++++.++|||||++++.+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 118 NFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred ECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 86543221 125799999999999999999874
No 89
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.67 E-value=2.1e-16 Score=134.51 Aligned_cols=110 Identities=19% Similarity=0.223 Sum_probs=93.0
Q ss_pred HHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC---CC
Q 021975 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL---PF 233 (304)
Q Consensus 157 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l---p~ 233 (304)
.+...+...++.+|||||||+|.++..+++.+. +++|+|+++.+++.++++ .++.+..+|+.++ ++
T Consensus 43 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~---------~~~~~~~~~~~~~~~~~~ 111 (227)
T 3e8s_A 43 AILLAILGRQPERVLDLGCGEGWLLRALADRGI--EAVGVDGDRTLVDAARAA---------GAGEVHLASYAQLAEAKV 111 (227)
T ss_dssp HHHHHHHHTCCSEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHT---------CSSCEEECCHHHHHTTCS
T ss_pred HHHHHhhcCCCCEEEEeCCCCCHHHHHHHHCCC--EEEEEcCCHHHHHHHHHh---------cccccchhhHHhhccccc
Confidence 344555555678999999999999999999865 999999999999999984 4567888887665 44
Q ss_pred CC-CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 234 AS-GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 234 ~~-~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
.. ++||+|++.++++ ..++..+++++.++|||||++++.++...
T Consensus 112 ~~~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 156 (227)
T 3e8s_A 112 PVGKDYDLICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHPW 156 (227)
T ss_dssp CCCCCEEEEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred ccCCCccEEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCcc
Confidence 44 4599999999999 88999999999999999999999998663
No 90
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.67 E-value=7.9e-16 Score=139.34 Aligned_cols=118 Identities=14% Similarity=0.255 Sum_probs=100.9
Q ss_pred HHHHhhcc--cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCC
Q 021975 157 MAQEYFKS--AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (304)
Q Consensus 157 ~l~~~l~~--~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 234 (304)
.+.+.+.. .++.+|||+|||+|.++..+++..+..+++++|++ .+++.+++++...+ ...++.++.+|+.+.+++
T Consensus 154 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~ 230 (335)
T 2r3s_A 154 LIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQG--VASRYHTIAGSAFEVDYG 230 (335)
T ss_dssp HHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHT--CGGGEEEEESCTTTSCCC
T ss_pred HHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcC--CCcceEEEecccccCCCC
Confidence 34444444 56789999999999999999999777799999999 99999999988766 345799999999887766
Q ss_pred CCccceEEecchhccCCCH--HHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 235 SGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
++ ||+|++.+++||++++ ..+++++.++|||||++++.++...
T Consensus 231 ~~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 231 ND-YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp SC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred CC-CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 54 9999999999999766 5899999999999999999987754
No 91
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.66 E-value=1.2e-15 Score=132.43 Aligned_cols=106 Identities=25% Similarity=0.421 Sum_probs=90.2
Q ss_pred ccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEe
Q 021975 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (304)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (304)
..++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++....+ .++.++++|+.+++++ ++||+|++
T Consensus 39 ~~~~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~----~~v~~~~~d~~~~~~~-~~fD~v~~ 111 (252)
T 1wzn_A 39 KREVRRVLDLACGTGIPTLELAERGY--EVVGLDLHEEMLRVARRKAKERN----LKIEFLQGDVLEIAFK-NEFDAVTM 111 (252)
T ss_dssp SSCCCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CCCEEEESCGGGCCCC-SCEEEEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhcC----CceEEEECChhhcccC-CCccEEEE
Confidence 34568999999999999999999865 99999999999999999987765 4799999999888764 68999998
Q ss_pred cc-hhccCC--CHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 244 GA-ALHCWP--SPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 244 ~~-vl~h~~--d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
.. +++|+. +...+++++.++|||||++++..+.
T Consensus 112 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 112 FFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp CSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 64 455554 4568999999999999999987654
No 92
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.66 E-value=5.4e-16 Score=131.92 Aligned_cols=107 Identities=18% Similarity=0.231 Sum_probs=90.3
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC--CCCCccceEEe
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--FASGFVDAVHA 243 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--~~~~~fD~V~~ 243 (304)
++.+|||||||+|.++..+++..+..+++|+|+|+.+++.|+++++..+ ..++.++++|+..++ +++++||.|++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~---~~nv~~~~~d~~~l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSE---AQNVKLLNIDADTLTDVFEPGEVKRVYL 114 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSC---CSSEEEECCCGGGHHHHCCTTSCCEEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcC---CCCEEEEeCCHHHHHhhcCcCCcCEEEE
Confidence 4679999999999999999999777899999999999999999988776 267999999998865 67889999987
Q ss_pred cchhccCCC--------HHHHHHHHHHhcccCcEEEEEEe
Q 021975 244 GAALHCWPS--------PSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 244 ~~vl~h~~d--------~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
.+...+... ...+++++.++|||||.|++.+.
T Consensus 115 ~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 115 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred ECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 654322111 25789999999999999999873
No 93
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.66 E-value=2.4e-16 Score=134.66 Aligned_cols=108 Identities=15% Similarity=0.157 Sum_probs=90.4
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC-C--CCCCccceEE
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-P--FASGFVDAVH 242 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p--~~~~~fD~V~ 242 (304)
++.+|||||||+|.++..+++.++..+|+|+|+++.+++.|+++.+..+ ..++.++++|+.++ + +++++||.|+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~---l~nv~~~~~Da~~~l~~~~~~~~~d~v~ 110 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG---LSNLRVMCHDAVEVLHKMIPDNSLRMVQ 110 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTT---CSSEEEECSCHHHHHHHHSCTTCEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhC---CCcEEEEECCHHHHHHHHcCCCChheEE
Confidence 4679999999999999999999888899999999999999999988776 35799999998774 3 6789999999
Q ss_pred ecchhccCCCH--------HHHHHHHHHhcccCcEEEEEEeC
Q 021975 243 AGAALHCWPSP--------SNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 243 ~~~vl~h~~d~--------~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+.+...+.... ..+++++.++|||||+|++.+..
T Consensus 111 ~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 111 LFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp EESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 87543322111 25899999999999999998853
No 94
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.66 E-value=1.1e-15 Score=140.62 Aligned_cols=113 Identities=14% Similarity=0.198 Sum_probs=97.8
Q ss_pred HHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCc
Q 021975 158 AQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGF 237 (304)
Q Consensus 158 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~ 237 (304)
+.+.+...++.+|||||||+|.++..+++.++..+++++|+ +.+++.+++++...+ ...++.++.+|+.+ +++. .
T Consensus 174 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~-~~~~-~ 248 (374)
T 1qzz_A 174 PADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAG--LADRVTVAEGDFFK-PLPV-T 248 (374)
T ss_dssp HHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT--CTTTEEEEECCTTS-CCSC-C
T ss_pred HHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcC--CCCceEEEeCCCCC-cCCC-C
Confidence 34444445678999999999999999999987789999999 999999999988776 34589999999975 4444 4
Q ss_pred cceEEecchhccCCCHH--HHHHHHHHhcccCcEEEEEEe
Q 021975 238 VDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 238 fD~V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~lvi~~~ 275 (304)
||+|++.+++||++++. .+++++.++|||||++++.++
T Consensus 249 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 249 ADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 99999999999999885 899999999999999999887
No 95
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.66 E-value=1.1e-15 Score=126.75 Aligned_cols=110 Identities=17% Similarity=0.226 Sum_probs=94.1
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (304)
..+...+ .++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++. .++.++.+|+..+++++
T Consensus 38 ~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~~~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~ 105 (195)
T 3cgg_A 38 RLIDAMA--PRGAKILDAGCGQGRIGGYLSKQGH--DVLGTDLDPILIDYAKQDF--------PEARWVVGDLSVDQISE 105 (195)
T ss_dssp HHHHHHS--CTTCEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHC--------TTSEEEECCTTTSCCCC
T ss_pred HHHHHhc--cCCCeEEEECCCCCHHHHHHHHCCC--cEEEEcCCHHHHHHHHHhC--------CCCcEEEcccccCCCCC
Confidence 3444443 3578999999999999999999865 9999999999999999853 46899999999988888
Q ss_pred CccceEEec-chhccCC--CHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 236 GFVDAVHAG-AALHCWP--SPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 236 ~~fD~V~~~-~vl~h~~--d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++||+|++. .+++|+. +...+++++.++|||||++++.....
T Consensus 106 ~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 106 TDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp CCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred CceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 899999998 7899985 34789999999999999999988765
No 96
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.66 E-value=7.6e-16 Score=138.38 Aligned_cols=111 Identities=20% Similarity=0.257 Sum_probs=91.8
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCc----cCCCCeEEEEccCCCCC----CC--C
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNT----ILTSNLALVRADVCRLP----FA--S 235 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~----~~~~~i~~~~~d~~~lp----~~--~ 235 (304)
++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.++++....+. ....++.++++|+..++ ++ +
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGR-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhcC-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 57799999999999999998753 56999999999999999998765310 01247899999998876 53 4
Q ss_pred CccceEEecchhccC-C---CHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 236 GFVDAVHAGAALHCW-P---SPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~-~---d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++||+|++.+++||+ . ++..+++++.++|||||++++.++..
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 589999999999988 3 45689999999999999999999864
No 97
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.65 E-value=1.9e-15 Score=131.60 Aligned_cols=121 Identities=21% Similarity=0.327 Sum_probs=103.0
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEcc
Q 021975 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD 227 (304)
Q Consensus 149 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d 227 (304)
.........+...+...++.+|||+|||+|.++..+++. ++..+++|+|+++.+++.|+++++..+ ...++.++.+|
T Consensus 76 ~~~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~--~~~~v~~~~~d 153 (255)
T 3mb5_A 76 IVHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG--FDDRVTIKLKD 153 (255)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT--CTTTEEEECSC
T ss_pred cccHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC--CCCceEEEECc
Confidence 334455567777777778899999999999999999998 767799999999999999999998877 34559999999
Q ss_pred CCCCCCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 228 VCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 228 ~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+.+. +++++||+|++ +.+++..+++++.++|||||++++..+..
T Consensus 154 ~~~~-~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 197 (255)
T 3mb5_A 154 IYEG-IEEENVDHVIL-----DLPQPERVVEHAAKALKPGGFFVAYTPCS 197 (255)
T ss_dssp GGGC-CCCCSEEEEEE-----CSSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred hhhc-cCCCCcCEEEE-----CCCCHHHHHHHHHHHcCCCCEEEEEECCH
Confidence 9864 66788999998 56788899999999999999999987643
No 98
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.65 E-value=8.8e-16 Score=132.63 Aligned_cols=112 Identities=19% Similarity=0.210 Sum_probs=87.3
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc---CccCCCCeEEEEccCCC-CC--CCCCcc
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD---NTILTSNLALVRADVCR-LP--FASGFV 238 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---~~~~~~~i~~~~~d~~~-lp--~~~~~f 238 (304)
.++.+|||||||+|.++..+++..+...++|+|+++.+++.|+++++.. ......++.++++|+.. ++ +++++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 3466899999999999999999987789999999999999999877531 00023689999999987 66 778999
Q ss_pred ceEEecchhccCCC--------HHHHHHHHHHhcccCcEEEEEEeC
Q 021975 239 DAVHAGAALHCWPS--------PSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 239 D~V~~~~vl~h~~d--------~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
|.|++.+.-.+... ...+++++.++|||||.|++.+..
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 99987543221110 136899999999999999998754
No 99
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.65 E-value=2.6e-16 Score=139.79 Aligned_cols=120 Identities=21% Similarity=0.282 Sum_probs=87.8
Q ss_pred HHHHHhhcc--cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcc--------------C--
Q 021975 156 KMAQEYFKS--AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI--------------L-- 217 (304)
Q Consensus 156 ~~l~~~l~~--~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~--------------~-- 217 (304)
+.+.+.+.. .++.+|||||||+|.+...++... ..+|+|+|+|+.|++.|+++++..... .
T Consensus 59 ~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~ 137 (289)
T 2g72_A 59 RCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSH-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKG 137 (289)
T ss_dssp HHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGG-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSC
T ss_pred HHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccC-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcc
Confidence 334444432 367899999999999554444332 349999999999999998865431100 0
Q ss_pred -----------CCCeEEEEccCCC-CCC-----CCCccceEEecchhcc----CCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 218 -----------TSNLALVRADVCR-LPF-----ASGFVDAVHAGAALHC----WPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 218 -----------~~~i~~~~~d~~~-lp~-----~~~~fD~V~~~~vl~h----~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
...+.++.+|+.. +|+ ++++||+|++.++|+| ++++..+++++.++|||||+|++....
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~ 217 (289)
T 2g72_A 138 ECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGAL 217 (289)
T ss_dssp CCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred cchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 0015677889987 654 3467999999999999 667889999999999999999997643
No 100
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.65 E-value=1.6e-15 Score=138.04 Aligned_cols=112 Identities=22% Similarity=0.332 Sum_probs=96.3
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (304)
+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+++ +++.|+++++..+ ...++.++.+|+.++++++
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~gvD~s~-~~~~a~~~~~~~~--~~~~i~~~~~d~~~~~~~~ 129 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAG-AKKVLGVDQSE-ILYQAMDIIRLNK--LEDTITLIKGKIEEVHLPV 129 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEESST-HHHHHHHHHHHTT--CTTTEEEEESCTTTSCCSC
T ss_pred HHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcC-CCEEEEEChHH-HHHHHHHHHHHcC--CCCcEEEEEeeHHHhcCCC
Confidence 344455555678899999999999999999885 45999999997 9999999998877 4578999999999998888
Q ss_pred CccceEEecc---hhccCCCHHHHHHHHHHhcccCcEEE
Q 021975 236 GFVDAVHAGA---ALHCWPSPSNAVAEISRILRSGGVFV 271 (304)
Q Consensus 236 ~~fD~V~~~~---vl~h~~d~~~~l~~~~r~LkpgG~lv 271 (304)
++||+|++.. .+.|..++..++.++.++|||||+++
T Consensus 130 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 130 EKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 8999999865 57777788899999999999999988
No 101
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.65 E-value=1.3e-15 Score=138.97 Aligned_cols=118 Identities=13% Similarity=0.214 Sum_probs=100.7
Q ss_pred HHHhhcccC-CCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-CCC
Q 021975 158 AQEYFKSAQ-GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FAS 235 (304)
Q Consensus 158 l~~~l~~~~-~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~~~ 235 (304)
+.+.+...+ +.+|||||||+|.++..+++.++..+++++|+ +.+++.+++++...+ ...++.++.+|+.+.+ +..
T Consensus 170 ~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~ 246 (352)
T 3mcz_A 170 VVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHD--LGGRVEFFEKNLLDARNFEG 246 (352)
T ss_dssp HHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT--CGGGEEEEECCTTCGGGGTT
T ss_pred HHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcC--CCCceEEEeCCcccCcccCC
Confidence 333444445 78999999999999999999988889999999 889999999888766 3467999999998865 134
Q ss_pred CccceEEecchhccCCCH--HHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 236 GFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
+.||+|++.+++||++++ ..++++++++|||||+|++.++...
T Consensus 247 ~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (352)
T 3mcz_A 247 GAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMN 291 (352)
T ss_dssp CCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCC
T ss_pred CCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 569999999999999977 7899999999999999999987654
No 102
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.64 E-value=3.1e-15 Score=130.16 Aligned_cols=121 Identities=14% Similarity=0.112 Sum_probs=103.1
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhc-CccCCCCeEEEEc
Q 021975 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQD-NTILTSNLALVRA 226 (304)
Q Consensus 149 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~-~~~~~~~i~~~~~ 226 (304)
.........+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.++++++.. + ..++.++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g---~~~v~~~~~ 155 (258)
T 2pwy_A 79 PTYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ---VENVRFHLG 155 (258)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC---CCCEEEEES
T ss_pred cccchHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC---CCCEEEEEC
Confidence 334445566677777777889999999999999999998 66679999999999999999998776 4 367999999
Q ss_pred cCCCCCCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 227 DVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 227 d~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
|+.+.++++++||+|++ +.+++..+++++.++|||||++++.++..
T Consensus 156 d~~~~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 156 KLEEAELEEAAYDGVAL-----DLMEPWKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp CGGGCCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESCH
T ss_pred chhhcCCCCCCcCEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 99887777889999998 46788899999999999999999988654
No 103
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.64 E-value=7.8e-16 Score=141.29 Aligned_cols=125 Identities=12% Similarity=0.111 Sum_probs=100.0
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHH-------hcCccCCCCeEEEE
Q 021975 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIK-------QDNTILTSNLALVR 225 (304)
Q Consensus 153 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~-------~~~~~~~~~i~~~~ 225 (304)
..+..+.+.+...++.+|||||||+|..+..++...+..+++|||+++.+++.|+++.+ ..++ ...++.|++
T Consensus 160 ~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl-~~~rVefi~ 238 (438)
T 3uwp_A 160 DLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGK-KHAEYTLER 238 (438)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTB-CCCEEEEEE
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCC-CCCCeEEEE
Confidence 34555666677778899999999999999999877544469999999999999987542 2331 126899999
Q ss_pred ccCCCCCCCC--CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCCCC
Q 021975 226 ADVCRLPFAS--GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYT 279 (304)
Q Consensus 226 ~d~~~lp~~~--~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~~~ 279 (304)
+|+.++++.+ ..||+|+++.++ +.++....|.++.++|||||+|++.+...+.
T Consensus 239 GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~ 293 (438)
T 3uwp_A 239 GDFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFAPL 293 (438)
T ss_dssp CCTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSSCT
T ss_pred CcccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeecccCC
Confidence 9999988754 479999998766 4578888999999999999999998776643
No 104
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.64 E-value=1.5e-15 Score=137.59 Aligned_cols=117 Identities=15% Similarity=0.095 Sum_probs=99.3
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (304)
..+.+.+...+ .+|||+|||+|.++..+++..+..+++++|+ +.+++.+++++...+ ...++.++.+|+.+ +++
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~-~~~- 231 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLL--AGERVSLVGGDMLQ-EVP- 231 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHH--HTTSEEEEESCTTT-CCC-
T ss_pred HHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcC--CCCcEEEecCCCCC-CCC-
Confidence 33444444344 8999999999999999999987789999999 999999999877654 34689999999977 555
Q ss_pred CccceEEecchhccCCCHH--HHHHHHHHhcccCcEEEEEEeCCC
Q 021975 236 GFVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
++||+|++..++||++++. .+++++.++|||||++++.++...
T Consensus 232 ~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 232 SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 6799999999999998877 899999999999999999987654
No 105
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.64 E-value=8e-16 Score=128.68 Aligned_cols=111 Identities=18% Similarity=0.292 Sum_probs=92.4
Q ss_pred cCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-CCCCccceEE
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FASGFVDAVH 242 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~~~~~fD~V~ 242 (304)
.++.+|||+|||+|.++..+++. ++..+++|+|+++.+++.|+++++..+ ...++.++++|+.+++ +.+++||+|+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN--LIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT--CGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCCeEEEECCHHHHhhhccCCceEEE
Confidence 45789999999999999999987 445699999999999999999998876 3468999999998775 5568999999
Q ss_pred ecchh---------ccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 243 AGAAL---------HCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 243 ~~~vl---------~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+...+ ++..+...+++++.++|||||++++..+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 87654 111134579999999999999999998654
No 106
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.64 E-value=6.3e-16 Score=131.46 Aligned_cols=110 Identities=24% Similarity=0.302 Sum_probs=88.3
Q ss_pred hcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHH----hcCccCCCCeEEEEccCCCCCCCCCc
Q 021975 162 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIK----QDNTILTSNLALVRADVCRLPFASGF 237 (304)
Q Consensus 162 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~----~~~~~~~~~i~~~~~d~~~lp~~~~~ 237 (304)
+...++.+|||||||+|.++..+++.++..+|+|+|+|+.+++.+.+..+ ..+ ..++.++++|+.++|+.+++
T Consensus 23 l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~---~~~v~~~~~d~~~l~~~~~~ 99 (218)
T 3mq2_A 23 LRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGG---LPNLLYLWATAERLPPLSGV 99 (218)
T ss_dssp HHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTC---CTTEEEEECCSTTCCSCCCE
T ss_pred hhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcC---CCceEEEecchhhCCCCCCC
Confidence 34456789999999999999999999777899999999998886433332 222 35899999999999987766
Q ss_pred cceEEe---cchh--ccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 238 VDAVHA---GAAL--HCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 238 fD~V~~---~~vl--~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
|.|+. ...+ +|++++..+++++.++|||||++++...
T Consensus 100 -d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 100 -GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp -EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEE
T ss_pred -CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEec
Confidence 76663 3334 3888999999999999999999999653
No 107
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.64 E-value=1.7e-15 Score=132.46 Aligned_cols=111 Identities=14% Similarity=0.202 Sum_probs=88.5
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC
Q 021975 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (304)
Q Consensus 154 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 233 (304)
..+.+...+...++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++.+.. ++..++.+++.
T Consensus 33 ~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~--~V~gvD~S~~ml~~Ar~~~~~~---------~v~~~~~~~~~ 101 (261)
T 3iv6_A 33 DRENDIFLENIVPGSTVAVIGASTRFLIEKALERGA--SVTVFDFSQRMCDDLAEALADR---------CVTIDLLDITA 101 (261)
T ss_dssp HHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTSSS---------CCEEEECCTTS
T ss_pred HHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHhc---------cceeeeeeccc
Confidence 344556666777788999999999999999999876 9999999999999999976432 23333333322
Q ss_pred -----CCCccceEEecchhccCC--CHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 234 -----ASGFVDAVHAGAALHCWP--SPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 234 -----~~~~fD~V~~~~vl~h~~--d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
.+++||+|++..+++|+. +...+++++.++| |||+++++...
T Consensus 102 ~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 102 EIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp CCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred ccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 256899999999999986 3457999999999 99999998754
No 108
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.64 E-value=1.9e-15 Score=138.13 Aligned_cols=107 Identities=16% Similarity=0.256 Sum_probs=92.8
Q ss_pred cccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEE
Q 021975 163 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 242 (304)
Q Consensus 163 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~ 242 (304)
...++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.|+++.+..+ ...++.++++|+.++++++++||+|+
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~g-~~~v~gvD~s~-~l~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~fD~Ii 138 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKAG-ARKVIGIECSS-ISDYAVKIVKANK--LDHVVTIIKGKVEEVELPVEKVDIII 138 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHTT-CSEEEEEECST-HHHHHHHHHHHTT--CTTTEEEEESCTTTCCCSSSCEEEEE
T ss_pred ccCCCCEEEEEeccchHHHHHHHHCC-CCEEEEECcHH-HHHHHHHHHHHcC--CCCcEEEEECcHHHccCCCCceEEEE
Confidence 34567899999999999999999984 46999999995 9999999998887 45669999999999998889999999
Q ss_pred ecch---hccCCCHHHHHHHHHHhcccCcEEEEE
Q 021975 243 AGAA---LHCWPSPSNAVAEISRILRSGGVFVGT 273 (304)
Q Consensus 243 ~~~v---l~h~~d~~~~l~~~~r~LkpgG~lvi~ 273 (304)
+..+ +.+..++..+++++.++|||||+++..
T Consensus 139 s~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 139 SEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp ECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred EccccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 8654 555578999999999999999998743
No 109
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.64 E-value=1.6e-15 Score=133.85 Aligned_cols=113 Identities=20% Similarity=0.211 Sum_probs=94.5
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhc-CccCCCCeEEEEccCCCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQD-NTILTSNLALVRADVCRLPF 233 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~-~~~~~~~i~~~~~d~~~lp~ 233 (304)
..+...+...++.+|||+|||+|.++..+++. ++..+++|+|+++.+++.++++++.. + ..++.++.+|+.+ ++
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g---~~~v~~~~~d~~~-~~ 175 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD---IGNVRTSRSDIAD-FI 175 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC---CTTEEEECSCTTT-CC
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC---CCcEEEEECchhc-cC
Confidence 45556666677889999999999999999987 55669999999999999999998876 5 2579999999987 66
Q ss_pred CCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++++||+|++ |++++..+++++.++|||||++++.++..
T Consensus 176 ~~~~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 176 SDQMYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp CSCCEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred cCCCccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 6788999998 67889999999999999999999998654
No 110
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.63 E-value=1.5e-16 Score=131.22 Aligned_cols=119 Identities=10% Similarity=0.051 Sum_probs=96.8
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccC
Q 021975 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV 228 (304)
Q Consensus 149 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~ 228 (304)
+..+.....+..++.. ..+|||+|||+|.++..++...|..+|+++|+|+.|++.++++++..+ ...++.+ +|.
T Consensus 34 p~ld~fY~~~~~~l~~--~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g--~~~~v~~--~d~ 107 (200)
T 3fzg_A 34 ATLNDFYTYVFGNIKH--VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLK--TTIKYRF--LNK 107 (200)
T ss_dssp GGHHHHHHHHHHHSCC--CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSC--CSSEEEE--ECC
T ss_pred HhHHHHHHHHHhhcCC--CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcC--CCccEEE--ecc
Confidence 3344555566666643 779999999999999999998888899999999999999999998877 2335666 566
Q ss_pred CCCCCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEE
Q 021975 229 CRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 229 ~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
... .+.++||+|++..+|||+.+....+.++.+.|||||++|-..
T Consensus 108 ~~~-~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 108 ESD-VYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHH-HTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred ccc-CCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 443 346889999999999999777778889999999999887766
No 111
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.63 E-value=7.1e-16 Score=129.96 Aligned_cols=121 Identities=11% Similarity=0.089 Sum_probs=94.8
Q ss_pred HHHHHHHhhcc-cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCC-CCeEEEEccCCCC
Q 021975 154 EFKMAQEYFKS-AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILT-SNLALVRADVCRL 231 (304)
Q Consensus 154 ~~~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~-~~i~~~~~d~~~l 231 (304)
..+.+.+.+.. .++.+|||+|||+|.++..++..+. .+|+|+|+|+.+++.|+++++..+ .. .++.++++|+.++
T Consensus 40 ~~~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~--~~~~~v~~~~~d~~~~ 116 (201)
T 2ift_A 40 VKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTLK--CSSEQAEVINQSSLDF 116 (201)
T ss_dssp HHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTT--CCTTTEEEECSCHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHhC--CCccceEEEECCHHHH
Confidence 33344444433 2578999999999999998777753 589999999999999999998876 22 5899999998764
Q ss_pred CC--CCCc-cceEEecchhccCCCHHHHHHHH--HHhcccCcEEEEEEeCCC
Q 021975 232 PF--ASGF-VDAVHAGAALHCWPSPSNAVAEI--SRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 232 p~--~~~~-fD~V~~~~vl~h~~d~~~~l~~~--~r~LkpgG~lvi~~~~~~ 278 (304)
.. .+++ ||+|++...++ ..+...+++++ .++|||||++++.+....
T Consensus 117 ~~~~~~~~~fD~I~~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 117 LKQPQNQPHFDVVFLDPPFH-FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp TTSCCSSCCEEEEEECCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred HHhhccCCCCCEEEECCCCC-CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 32 3578 99999987744 56777889999 668999999999887654
No 112
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.63 E-value=2e-15 Score=130.62 Aligned_cols=103 Identities=17% Similarity=0.080 Sum_probs=89.8
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCC---CCccceE
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA---SGFVDAV 241 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~---~~~fD~V 241 (304)
.++.+|||||||+|.++..++...+..+|+|+|+++.+++.++++.+..++ .++.++++|+.++++. +++||+|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQL---ENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC---SSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CCEEEEeccHHHhcccccccCCccEE
Confidence 357899999999999999999766667999999999999999999888762 4699999999887653 5789999
Q ss_pred EecchhccCCCHHHHHHHHHHhcccCcEEEEEE
Q 021975 242 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 242 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
++.. +.++..+++++.++|||||++++..
T Consensus 146 ~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 146 TARA----VARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp EEEC----CSCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEec----cCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 9976 4678999999999999999998875
No 113
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.63 E-value=3e-15 Score=137.05 Aligned_cols=114 Identities=18% Similarity=0.322 Sum_probs=98.0
Q ss_pred HHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCc
Q 021975 158 AQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGF 237 (304)
Q Consensus 158 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~ 237 (304)
+.+.+...++.+|||||||+|.++..+++.++..+++++|+ +.+++.++++++..+ ...++.++.+|+.+ +++. .
T Consensus 175 l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~-~~~~-~ 249 (360)
T 1tw3_A 175 PAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEG--LSDRVDVVEGDFFE-PLPR-K 249 (360)
T ss_dssp HHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTT--CTTTEEEEECCTTS-CCSS-C
T ss_pred HHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcC--CCCceEEEeCCCCC-CCCC-C
Confidence 33444445678999999999999999999988889999999 999999999988776 34589999999875 4444 4
Q ss_pred cceEEecchhccCCCHH--HHHHHHHHhcccCcEEEEEEeC
Q 021975 238 VDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 238 fD~V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
||+|++..++||++++. .+++++.++|||||++++.++.
T Consensus 250 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 250 ADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 99999999999999874 8999999999999999999876
No 114
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.63 E-value=5.6e-16 Score=135.25 Aligned_cols=112 Identities=18% Similarity=0.353 Sum_probs=91.4
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcc--------------C------------C
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI--------------L------------T 218 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~--------------~------------~ 218 (304)
.++.+|||||||+|.++..++..+. .+|+|+|+|+.+++.+++++...+.. . .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 4567899999999999998888764 58999999999999999987543200 0 0
Q ss_pred CCe-EEEEccCCCCC-CCC---CccceEEecchhc----cCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 219 SNL-ALVRADVCRLP-FAS---GFVDAVHAGAALH----CWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 219 ~~i-~~~~~d~~~lp-~~~---~~fD~V~~~~vl~----h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
.++ .++++|+...+ +++ ++||+|++..+++ |+.++..+++++.++|||||+|++.+...
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 201 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALK 201 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESS
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCC
Confidence 127 89999998754 355 7999999999999 66678899999999999999999988643
No 115
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.62 E-value=3.1e-15 Score=128.50 Aligned_cols=101 Identities=14% Similarity=0.201 Sum_probs=86.4
Q ss_pred hcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC----CCCCCCc
Q 021975 162 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR----LPFASGF 237 (304)
Q Consensus 162 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~----lp~~~~~ 237 (304)
+...++.+|||+|||+|.++..+++..+..+|+|+|+++.+++.++++.+.. .++.++.+|+.. +++. ++
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~v~~~~~d~~~~~~~~~~~-~~ 143 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-----ENIIPILGDANKPQEYANIV-EK 143 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-----TTEEEEECCTTCGGGGTTTS-CC
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-----CCeEEEECCCCCcccccccC-cc
Confidence 3445678999999999999999999854569999999999999999876542 589999999988 7766 78
Q ss_pred cceEEecchhccCCCH---HHHHHHHHHhcccCcEEEEE
Q 021975 238 VDAVHAGAALHCWPSP---SNAVAEISRILRSGGVFVGT 273 (304)
Q Consensus 238 fD~V~~~~vl~h~~d~---~~~l~~~~r~LkpgG~lvi~ 273 (304)
||+|+ ++++++ ..+++++.++|||||++++.
T Consensus 144 ~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 144 VDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 99998 556777 77899999999999999997
No 116
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.62 E-value=2.6e-15 Score=124.22 Aligned_cols=119 Identities=19% Similarity=0.222 Sum_probs=99.3
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC
Q 021975 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (304)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (304)
.......+...+...++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.++++++..+ ...++.++.+|+..
T Consensus 18 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~ 93 (192)
T 1l3i_A 18 AMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHG--LGDNVTLMEGDAPE 93 (192)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTT--CCTTEEEEESCHHH
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcC--CCcceEEEecCHHH
Confidence 44555667777777778899999999999999999987 499999999999999999988776 33689999999866
Q ss_pred CCCCC-CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 231 LPFAS-GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 231 lp~~~-~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++++ ++||+|++..+++| ...+++++.++|+|||++++.++..
T Consensus 94 -~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~l~~gG~l~~~~~~~ 137 (192)
T 1l3i_A 94 -ALCKIPDIDIAVVGGSGGE---LQEILRIIKDKLKPGGRIIVTAILL 137 (192)
T ss_dssp -HHTTSCCEEEEEESCCTTC---HHHHHHHHHHTEEEEEEEEEEECBH
T ss_pred -hcccCCCCCEEEECCchHH---HHHHHHHHHHhcCCCcEEEEEecCc
Confidence 2333 58999999887764 5889999999999999999988653
No 117
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.62 E-value=6e-15 Score=126.62 Aligned_cols=118 Identities=14% Similarity=0.170 Sum_probs=95.9
Q ss_pred HHHHHHHHh---hcccCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccC
Q 021975 153 EEFKMAQEY---FKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV 228 (304)
Q Consensus 153 ~~~~~l~~~---l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~ 228 (304)
++...+..- +...++.+|||+|||+|.++..+++. |+.++|+|+|+++.|++.++++.+.. .++..+.+|.
T Consensus 61 klaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~-----~ni~~V~~d~ 135 (233)
T 4df3_A 61 KLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR-----RNIFPILGDA 135 (233)
T ss_dssp HHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC-----TTEEEEESCT
T ss_pred HHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh-----cCeeEEEEec
Confidence 444444432 44678999999999999999999987 78889999999999999999876543 5789999888
Q ss_pred CC---CCCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 229 CR---LPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 229 ~~---lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
.. .++..+++|+|++. +.|..++..++.++.+.|||||+++++...+
T Consensus 136 ~~p~~~~~~~~~vDvVf~d--~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r 185 (233)
T 4df3_A 136 RFPEKYRHLVEGVDGLYAD--VAQPEQAAIVVRNARFFLRDGGYMLMAIKAR 185 (233)
T ss_dssp TCGGGGTTTCCCEEEEEEC--CCCTTHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred cCccccccccceEEEEEEe--ccCChhHHHHHHHHHHhccCCCEEEEEEecc
Confidence 65 34567889998864 5566778899999999999999999986554
No 118
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.62 E-value=3.4e-15 Score=137.71 Aligned_cols=107 Identities=18% Similarity=0.211 Sum_probs=94.7
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEec
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (304)
.++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.++++++.++ .++.++.+|+.+.+.++++||+|+++
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g~--~V~gvDis~~al~~A~~n~~~~~----~~v~~~~~D~~~~~~~~~~fD~Ii~n 305 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMGA--EVVGVEDDLASVLSLQKGLEANA----LKAQALHSDVDEALTEEARFDIIVTN 305 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTTC--EEEEEESBHHHHHHHHHHHHHTT----CCCEEEECSTTTTSCTTCCEEEEEEC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcC----CCeEEEEcchhhccccCCCeEEEEEC
Confidence 3577999999999999999999865 99999999999999999998876 35899999999887767899999999
Q ss_pred chhcc-----CCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 245 AALHC-----WPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 245 ~vl~h-----~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
..+++ ..+...+++++.++|||||++++.....
T Consensus 306 pp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 306 PPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp CCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred CchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 98888 4456789999999999999999987544
No 119
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.62 E-value=4.3e-15 Score=136.85 Aligned_cols=125 Identities=14% Similarity=0.118 Sum_probs=100.5
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC
Q 021975 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (304)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (304)
+...+++.+.+...++.+|||+|||+|.++..+++.++..+|+|+|+|+.+++.++++++.++.....++.++.+|+..
T Consensus 208 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~- 286 (375)
T 4dcm_A 208 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS- 286 (375)
T ss_dssp CHHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-
T ss_pred cHHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-
Confidence 3444567777777677899999999999999999998778999999999999999999988763222368999999987
Q ss_pred CCCCCccceEEecchhccCCC-----HHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 232 PFASGFVDAVHAGAALHCWPS-----PSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d-----~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++++++||+|+++..+++... ...+++++.++|||||+++++....
T Consensus 287 ~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~ 337 (375)
T 4dcm_A 287 GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 337 (375)
T ss_dssp TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECC
Confidence 566789999999988876322 2368999999999999999987544
No 120
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.62 E-value=8.1e-16 Score=126.44 Aligned_cols=121 Identities=16% Similarity=0.152 Sum_probs=95.0
Q ss_pred HHHHHHHhhc-ccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC-C
Q 021975 154 EFKMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-L 231 (304)
Q Consensus 154 ~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-l 231 (304)
..+.+.+.+. ..++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.++++++..+ ...++.++.+|+.+ +
T Consensus 18 ~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~ 94 (177)
T 2esr_A 18 VRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRG-MSAAVLVEKNRKAQAIIQDNIIMTK--AENRFTLLKMEAERAI 94 (177)
T ss_dssp CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTT-CCEEEEECCCHHHHHHHHHHHHTTT--CGGGEEEECSCHHHHH
T ss_pred HHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECcHHHhH
Confidence 3445555555 4467899999999999999999884 4599999999999999999998876 33579999999876 3
Q ss_pred CCCCCccceEEecchhccCCCHHHHHHHHH--HhcccCcEEEEEEeCCC
Q 021975 232 PFASGFVDAVHAGAALHCWPSPSNAVAEIS--RILRSGGVFVGTTFLRY 278 (304)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~--r~LkpgG~lvi~~~~~~ 278 (304)
+..+++||+|++...+++ .+....++.+. ++|||||++++.+....
T Consensus 95 ~~~~~~fD~i~~~~~~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 95 DCLTGRFDLVFLDPPYAK-ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp HHBCSCEEEEEECCSSHH-HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HhhcCCCCEEEECCCCCc-chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 433567999999866532 34456777777 99999999999887653
No 121
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.62 E-value=7.2e-15 Score=120.69 Aligned_cols=116 Identities=16% Similarity=0.202 Sum_probs=98.6
Q ss_pred CcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCC
Q 021975 150 GPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (304)
Q Consensus 150 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~ 229 (304)
......+.+...+...++.+|||+|||+|.++..+++. ..+++|+|+++.+++.++++++..+. .++.++.+|+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~~d~~ 93 (183)
T 2yxd_A 19 TKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAKR--CKFVYAIDYLDGAIEVTKQNLAKFNI---KNCQIIKGRAE 93 (183)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHTT--SSEEEEEECSHHHHHHHHHHHHHTTC---CSEEEEESCHH
T ss_pred CHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHHcCC---CcEEEEECCcc
Confidence 34555666777777777889999999999999999983 45999999999999999999988762 57999999997
Q ss_pred CCCCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 230 RLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 230 ~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+ ++++++||+|++..+ .++..+++++.++ |||.+++.++..
T Consensus 94 ~-~~~~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~ 134 (183)
T 2yxd_A 94 D-VLDKLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVL 134 (183)
T ss_dssp H-HGGGCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCH
T ss_pred c-cccCCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEeccc
Confidence 7 666789999999987 6788999999998 999999988654
No 122
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.62 E-value=3e-15 Score=126.20 Aligned_cols=121 Identities=10% Similarity=0.092 Sum_probs=96.4
Q ss_pred HHHHHHHHHhhccc-CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC
Q 021975 152 DEEFKMAQEYFKSA-QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (304)
Q Consensus 152 ~~~~~~l~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (304)
+...+.+.+.+... ++.+|||+|||+|.++..++..+. .+|+|+|+++.+++.|+++++..+. .++.++++|+.+
T Consensus 39 ~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~---~~v~~~~~D~~~ 114 (202)
T 2fpo_A 39 DRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKA---GNARVVNSNAMS 114 (202)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTC---CSEEEECSCHHH
T ss_pred HHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEECCHHH
Confidence 34444455554432 578999999999999998777762 4999999999999999999988762 689999999876
Q ss_pred -CCCCCCccceEEecchhccCCCHHHHHHHHHH--hcccCcEEEEEEeCC
Q 021975 231 -LPFASGFVDAVHAGAALHCWPSPSNAVAEISR--ILRSGGVFVGTTFLR 277 (304)
Q Consensus 231 -lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r--~LkpgG~lvi~~~~~ 277 (304)
++..+++||+|++...+ |..+...+++++.+ +|||||++++.....
T Consensus 115 ~~~~~~~~fD~V~~~~p~-~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 115 FLAQKGTPHNIVFVDPPF-RRGLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp HHSSCCCCEEEEEECCSS-STTTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred HHhhcCCCCCEEEECCCC-CCCcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 45556789999998763 35677888999876 599999999888765
No 123
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.61 E-value=5.2e-15 Score=125.58 Aligned_cols=105 Identities=12% Similarity=0.087 Sum_probs=81.8
Q ss_pred ccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC----CCCCCccc
Q 021975 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL----PFASGFVD 239 (304)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l----p~~~~~fD 239 (304)
..++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.+.+..+.. .++.++.+|+... ++. ++||
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~-----~~v~~~~~d~~~~~~~~~~~-~~fD 128 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER-----NNIIPLLFDASKPWKYSGIV-EKVD 128 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC-----SSEEEECSCTTCGGGTTTTC-CCEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC-----CCeEEEEcCCCCchhhcccc-ccee
Confidence 45678999999999999999998854569999999999887666655432 4788999998773 444 7899
Q ss_pred eEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 240 AVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 240 ~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+|++.. .++ .+...+++++.++|||||+|++....
T Consensus 129 ~V~~~~-~~~-~~~~~~l~~~~r~LkpgG~l~i~~~~ 163 (210)
T 1nt2_A 129 LIYQDI-AQK-NQIEILKANAEFFLKEKGEVVIMVKA 163 (210)
T ss_dssp EEEECC-CST-THHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred EEEEec-cCh-hHHHHHHHHHHHHhCCCCEEEEEEec
Confidence 999873 222 23345689999999999999998643
No 124
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.61 E-value=5.3e-15 Score=125.38 Aligned_cols=115 Identities=16% Similarity=0.096 Sum_probs=94.9
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC
Q 021975 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (304)
Q Consensus 154 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp 232 (304)
....+.+.+...++.+|||||||+|.++..+++.+ +..+++++|+++.+++.+++++...+ ..++.++.+|+....
T Consensus 65 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~ 141 (215)
T 2yxe_A 65 MVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG---YDNVIVIVGDGTLGY 141 (215)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT---CTTEEEEESCGGGCC
T ss_pred HHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCeEEEECCcccCC
Confidence 44456666666678899999999999999999885 44699999999999999999988765 256999999985432
Q ss_pred CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
..+++||+|++..+++|++ +++.++|||||++++.....
T Consensus 142 ~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 142 EPLAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp GGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEESSS
T ss_pred CCCCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEECCC
Confidence 2367899999999999987 48899999999999988644
No 125
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.61 E-value=3.9e-15 Score=134.19 Aligned_cols=115 Identities=14% Similarity=0.140 Sum_probs=97.1
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC
Q 021975 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (304)
Q Consensus 153 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (304)
...+.+.+.+...++.+|||||||+|.++..+++.++ ..+|+|+|+++.+++.|+++++..+. .++.++.+|+.+.
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~---~~v~~~~~d~~~~ 138 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI---ENVIFVCGDGYYG 138 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCGGGC
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCeEEEECChhhc
Confidence 3445666667777788999999999999999998865 35799999999999999999987762 5699999999875
Q ss_pred CCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+..+++||+|++..+++|+. +++.++|||||++++....
T Consensus 139 ~~~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 139 VPEFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp CGGGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBCB
T ss_pred cccCCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEECC
Confidence 54567899999999999987 5788999999999998643
No 126
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.61 E-value=2.3e-15 Score=124.43 Aligned_cols=126 Identities=15% Similarity=0.143 Sum_probs=98.8
Q ss_pred CCcHHHHHHHHHhhcc-cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEcc
Q 021975 149 PGPDEEFKMAQEYFKS-AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD 227 (304)
Q Consensus 149 ~~~~~~~~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d 227 (304)
+..+...+.+.+.+.. .++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.|+++++..+ ...++.++++|
T Consensus 26 p~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~~~~~~d 102 (187)
T 2fhp_A 26 PTTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRG-MDKSICIEKNFAALKVIKENIAITK--EPEKFEVRKMD 102 (187)
T ss_dssp CCCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEESC
T ss_pred cCHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHhC--CCcceEEEECc
Confidence 3344555566666643 467899999999999999888764 4599999999999999999998776 34579999999
Q ss_pred CCCCC----CCCCccceEEecchhccCCCHHHHHHHH--HHhcccCcEEEEEEeCCC
Q 021975 228 VCRLP----FASGFVDAVHAGAALHCWPSPSNAVAEI--SRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 228 ~~~lp----~~~~~fD~V~~~~vl~h~~d~~~~l~~~--~r~LkpgG~lvi~~~~~~ 278 (304)
+.+.. +.+++||+|++...++ ..+....++.+ .++|||||++++.+....
T Consensus 103 ~~~~~~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 103 ANRALEQFYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HHHHHHHHHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 86632 2267899999987744 45677778888 888999999999887663
No 127
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.61 E-value=5.8e-15 Score=126.53 Aligned_cols=112 Identities=16% Similarity=0.147 Sum_probs=94.0
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC
Q 021975 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (304)
Q Consensus 153 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp 232 (304)
...+.+.+.+...++.+|||||||+|.++..+++.+. +++|+|+++.+++.+++++...+ ++.++.+|+....
T Consensus 57 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~-----~v~~~~~d~~~~~ 129 (231)
T 1vbf_A 57 NLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIVD--KVVSVEINEKMYNYASKLLSYYN-----NIKLILGDGTLGY 129 (231)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHHHHHTTCS-----SEEEEESCGGGCC
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHcC--EEEEEeCCHHHHHHHHHHHhhcC-----CeEEEECCccccc
Confidence 3445666666666788999999999999999999874 99999999999999999876532 7999999997633
Q ss_pred CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
..+++||+|++..+++|+. .++.++|||||++++.+...
T Consensus 130 ~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 130 EEEKPYDRVVVWATAPTLL------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp GGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred ccCCCccEEEECCcHHHHH------HHHHHHcCCCcEEEEEEcCC
Confidence 3467899999999999986 36899999999999988654
No 128
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.61 E-value=8e-15 Score=129.36 Aligned_cols=121 Identities=17% Similarity=0.199 Sum_probs=101.5
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhc-CccCCCCeEEEEccC
Q 021975 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQD-NTILTSNLALVRADV 228 (304)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~-~~~~~~~i~~~~~d~ 228 (304)
.......+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.|+++++.. +. ...++.++.+|+
T Consensus 84 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~-~~~~v~~~~~d~ 162 (280)
T 1i9g_A 84 YPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQ-PPDNWRLVVSDL 162 (280)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTS-CCTTEEEECSCG
T ss_pred cHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC-CCCcEEEEECch
Confidence 3445556666777777889999999999999999985 55679999999999999999998765 20 136799999999
Q ss_pred CCCCCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 229 CRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 229 ~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
.+.++++++||+|++ +++++..+++++.++|||||++++.++..
T Consensus 163 ~~~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 163 ADSELPDGSVDRAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp GGCCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred HhcCCCCCceeEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 888777889999998 56788899999999999999999988753
No 129
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.61 E-value=9.4e-16 Score=124.87 Aligned_cols=120 Identities=16% Similarity=0.188 Sum_probs=94.7
Q ss_pred cHHHHHHHHHhhccc--CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccC
Q 021975 151 PDEEFKMAQEYFKSA--QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV 228 (304)
Q Consensus 151 ~~~~~~~l~~~l~~~--~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~ 228 (304)
.....+.+...+... ++.+|||+|||+|.++..+++.++ +++|+|+++.+++.++++++..+ .++.++++|+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~d~ 97 (171)
T 1ws6_A 24 PVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGW--EAVLVEKDPEAVRLLKENVRRTG----LGARVVALPV 97 (171)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHHHHT----CCCEEECSCH
T ss_pred HHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHcC----CceEEEeccH
Confidence 344444555555432 578999999999999999999987 69999999999999999998776 2799999998
Q ss_pred CCC-C-CC--CCccceEEecchhccCCCHHHHHHHHH--HhcccCcEEEEEEeCCC
Q 021975 229 CRL-P-FA--SGFVDAVHAGAALHCWPSPSNAVAEIS--RILRSGGVFVGTTFLRY 278 (304)
Q Consensus 229 ~~l-p-~~--~~~fD~V~~~~vl~h~~d~~~~l~~~~--r~LkpgG~lvi~~~~~~ 278 (304)
.+. + .. .++||+|++..+++ .+...+++.+. ++|||||++++.+....
T Consensus 98 ~~~~~~~~~~~~~~D~i~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 98 EVFLPEAKAQGERFTVAFMAPPYA--MDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred HHHHHhhhccCCceEEEEECCCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 763 2 11 24799999987765 55666777777 99999999999887653
No 130
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.61 E-value=3.7e-15 Score=128.30 Aligned_cols=120 Identities=11% Similarity=0.192 Sum_probs=98.0
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC
Q 021975 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (304)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (304)
....+.+...+...++.+|||||||+|..+..+++..+..+|+++|+++.+++.|+++++..+ ...++.++.+|+.+.
T Consensus 57 ~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~ 134 (232)
T 3ntv_A 57 RLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYH--FENQVRIIEGNALEQ 134 (232)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTT--CTTTEEEEESCGGGC
T ss_pred HHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECCHHHH
Confidence 344455666666567889999999999999999997667799999999999999999998877 346899999999663
Q ss_pred -C-CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 232 -P-FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 232 -p-~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+ ..+++||+|++... ..+...+++++.++|||||+|++....
T Consensus 135 ~~~~~~~~fD~V~~~~~---~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 135 FENVNDKVYDMIFIDAA---KAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp HHHHTTSCEEEEEEETT---SSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred HHhhccCCccEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 3 33679999998653 446778999999999999999885543
No 131
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.61 E-value=6.4e-15 Score=124.03 Aligned_cols=113 Identities=19% Similarity=0.180 Sum_probs=93.3
Q ss_pred HHHHHHhhccc---CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC
Q 021975 155 FKMAQEYFKSA---QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (304)
Q Consensus 155 ~~~l~~~l~~~---~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (304)
.+.+.+.+... ++.+|||+|||+|.++..++...+..+++|+|+++.+++.++++.+..+ ..++.++.+|+.+.
T Consensus 51 ~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~ 127 (207)
T 1jsx_A 51 VRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELK---LENIEPVQSRVEEF 127 (207)
T ss_dssp HHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT---CSSEEEEECCTTTS
T ss_pred HHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCeEEEecchhhC
Confidence 44444444322 3779999999999999999998667799999999999999999988776 24599999999887
Q ss_pred CCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
+ +.++||+|++.. +.++..+++++.++|||||++++...
T Consensus 128 ~-~~~~~D~i~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 128 P-SEPPFDGVISRA----FASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp C-CCSCEEEEECSC----SSSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred C-ccCCcCEEEEec----cCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 6 457899999854 35678999999999999999998864
No 132
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.61 E-value=1.8e-15 Score=129.14 Aligned_cols=122 Identities=9% Similarity=0.166 Sum_probs=97.9
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC-
Q 021975 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR- 230 (304)
Q Consensus 153 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~- 230 (304)
...+++...+...++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|+++++..+ ...++.++.+|+.+
T Consensus 45 ~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~ 122 (221)
T 3u81_A 45 AKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG--LQDKVTILNGASQDL 122 (221)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEESCHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC--CCCceEEEECCHHHH
Confidence 344455555555567899999999999999999863 35699999999999999999998877 34579999999754
Q ss_pred CCC-C----CCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 231 LPF-A----SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 231 lp~-~----~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++. . .++||+|++....++..+...+++++ ++|||||+|++.+...
T Consensus 123 l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 123 IPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp GGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred HHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 332 1 26899999998888877666788888 9999999999877654
No 133
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.61 E-value=1.5e-14 Score=123.87 Aligned_cols=108 Identities=18% Similarity=0.198 Sum_probs=89.0
Q ss_pred cCCCeEEEEcCC-ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC-CCCCCccceEE
Q 021975 165 AQGGLLVDVSCG-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-PFASGFVDAVH 242 (304)
Q Consensus 165 ~~~~~vLDiGcG-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p~~~~~fD~V~ 242 (304)
.++.+|||+||| +|.++..+++.. ..+|+|+|+++.+++.|+++++..+ .++.++++|+..+ ++++++||+|+
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~----~~v~~~~~d~~~~~~~~~~~fD~I~ 128 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNN----SNVRLVKSNGGIIKGVVEGTFDVIF 128 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTT----CCCEEEECSSCSSTTTCCSCEEEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhC----CCcEEEeCCchhhhhcccCceeEEE
Confidence 467899999999 999999999984 3499999999999999999998876 3899999997433 45578999999
Q ss_pred ecchhccCCC-------------------HHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 243 AGAALHCWPS-------------------PSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 243 ~~~vl~h~~d-------------------~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+...+++..+ ...+++++.++|||||++++..+..
T Consensus 129 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 182 (230)
T 3evz_A 129 SAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK 182 (230)
T ss_dssp ECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC
T ss_pred ECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc
Confidence 9866655433 3678999999999999999987654
No 134
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.61 E-value=3.1e-15 Score=136.48 Aligned_cols=114 Identities=15% Similarity=0.144 Sum_probs=91.0
Q ss_pred HHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCc
Q 021975 158 AQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGF 237 (304)
Q Consensus 158 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~ 237 (304)
+.+.+...++.+|||||||+|.++..+++.++..+++++|+ +.++. +++.+..+ ...++.++.+|+. .+++ +
T Consensus 176 ~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~--~~~~v~~~~~d~~-~~~p--~ 247 (348)
T 3lst_A 176 LARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPD--VAGRWKVVEGDFL-REVP--H 247 (348)
T ss_dssp HHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGG--GTTSEEEEECCTT-TCCC--C
T ss_pred HHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccC--CCCCeEEEecCCC-CCCC--C
Confidence 33344445677999999999999999999988889999999 44444 33322222 3467999999996 3444 8
Q ss_pred cceEEecchhccCCCH--HHHHHHHHHhcccCcEEEEEEeCCCC
Q 021975 238 VDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYT 279 (304)
Q Consensus 238 fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~lvi~~~~~~~ 279 (304)
||+|++.+++||++++ ..+|++++++|||||+|++.++....
T Consensus 248 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~ 291 (348)
T 3lst_A 248 ADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPE 291 (348)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCS
T ss_pred CcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 9999999999999988 58999999999999999999976543
No 135
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.60 E-value=9.2e-15 Score=132.37 Aligned_cols=111 Identities=18% Similarity=0.293 Sum_probs=93.3
Q ss_pred HHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCc
Q 021975 158 AQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGF 237 (304)
Q Consensus 158 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~ 237 (304)
+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|++ .+++.|+++++.++ ...++.++.+|+.++++++++
T Consensus 30 i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~~vD~s-~~~~~a~~~~~~~~--~~~~i~~~~~d~~~~~~~~~~ 105 (328)
T 1g6q_1 30 IIQNKDLFKDKIVLDVGCGTGILSMFAAKHG-AKHVIGVDMS-SIIEMAKELVELNG--FSDKITLLRGKLEDVHLPFPK 105 (328)
T ss_dssp HHHHHHHHTTCEEEEETCTTSHHHHHHHHTC-CSEEEEEESS-THHHHHHHHHHHTT--CTTTEEEEESCTTTSCCSSSC
T ss_pred HHhhHhhcCCCEEEEecCccHHHHHHHHHCC-CCEEEEEChH-HHHHHHHHHHHHcC--CCCCEEEEECchhhccCCCCc
Confidence 3333444567899999999999999999875 3599999999 59999999998877 456799999999998888789
Q ss_pred cceEEecc---hhccCCCHHHHHHHHHHhcccCcEEEE
Q 021975 238 VDAVHAGA---ALHCWPSPSNAVAEISRILRSGGVFVG 272 (304)
Q Consensus 238 fD~V~~~~---vl~h~~d~~~~l~~~~r~LkpgG~lvi 272 (304)
||+|++.. .+.|..++..++.++.++|||||+++.
T Consensus 106 ~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 106 VDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp EEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 99999874 455667788999999999999999873
No 136
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.60 E-value=5.7e-15 Score=124.33 Aligned_cols=104 Identities=17% Similarity=0.199 Sum_probs=89.9
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEec
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (304)
.++.+|||+|||+|.++..+++.+ ..+++|+|+++.+++.|+++++..+. .++.++.+|+.+.+ +++||+|++.
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~--~~~fD~i~~~ 132 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLG-AKSVLATDISDESMTAAEENAALNGI---YDIALQKTSLLADV--DGKFDLIVAN 132 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTC---CCCEEEESSTTTTC--CSCEEEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEeccccccC--CCCceEEEEC
Confidence 357899999999999999988864 46999999999999999999988762 34999999997753 5899999999
Q ss_pred chhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 245 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 245 ~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
.+++++ ..+++++.++|||||++++.++..
T Consensus 133 ~~~~~~---~~~l~~~~~~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 133 ILAEIL---LDLIPQLDSHLNEDGQVIFSGIDY 162 (205)
T ss_dssp SCHHHH---HHHGGGSGGGEEEEEEEEEEEEEG
T ss_pred CcHHHH---HHHHHHHHHhcCCCCEEEEEecCc
Confidence 888874 788999999999999999987654
No 137
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.60 E-value=4.3e-15 Score=129.99 Aligned_cols=116 Identities=11% Similarity=0.246 Sum_probs=93.8
Q ss_pred HHHHhhccc-CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC--C
Q 021975 157 MAQEYFKSA-QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--F 233 (304)
Q Consensus 157 ~l~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--~ 233 (304)
++..+.... ++.+|||+|||+|.++..+++.++ .+|+|+|+++.+++.|+++++..+ ...++.++++|+.+++ +
T Consensus 39 ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~~--~~~~v~~~~~D~~~~~~~~ 115 (259)
T 3lpm_A 39 LLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYNQ--LEDQIEIIEYDLKKITDLI 115 (259)
T ss_dssp HHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHTT--CTTTEEEECSCGGGGGGTS
T ss_pred HHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHCC--CcccEEEEECcHHHhhhhh
Confidence 445555555 688999999999999999999864 399999999999999999999887 4567999999998865 5
Q ss_pred CCCccceEEecchhccC-----C---------------CHHHHHHHHHHhcccCcEEEEEEe
Q 021975 234 ASGFVDAVHAGAALHCW-----P---------------SPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 234 ~~~~fD~V~~~~vl~h~-----~---------------d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
++++||+|+++-.+.+. . +...+++++.++|||||++++...
T Consensus 116 ~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 177 (259)
T 3lpm_A 116 PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR 177 (259)
T ss_dssp CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc
Confidence 57899999996443322 1 235689999999999999999654
No 138
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.59 E-value=1.2e-14 Score=128.23 Aligned_cols=118 Identities=19% Similarity=0.268 Sum_probs=100.3
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCC
Q 021975 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (304)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~ 229 (304)
.......+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.|+++++..+ ...++.++.+|+.
T Consensus 97 ~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~ 174 (277)
T 1o54_A 97 YPKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWG--LIERVTIKVRDIS 174 (277)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTT--CGGGEEEECCCGG
T ss_pred CHHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC--CCCCEEEEECCHH
Confidence 3344556667777777889999999999999999998 666799999999999999999988776 3357999999997
Q ss_pred CCCCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 230 RLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 230 ~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+. +++++||+|++ +.+++..+++++.++|||||++++.++.
T Consensus 175 ~~-~~~~~~D~V~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 175 EG-FDEKDVDALFL-----DVPDPWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp GC-CSCCSEEEEEE-----CCSCGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred Hc-ccCCccCEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 75 56678999998 4578889999999999999999998864
No 139
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.59 E-value=1.1e-16 Score=138.28 Aligned_cols=116 Identities=16% Similarity=0.154 Sum_probs=95.6
Q ss_pred HHHHHHHhhc-ccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC
Q 021975 154 EFKMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (304)
Q Consensus 154 ~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp 232 (304)
..+.+...+. ..++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|+++++..+ ...++.++++|+.+++
T Consensus 65 ~~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~~~--~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~ 140 (241)
T 3gdh_A 65 IAEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTGM--RVIAIDIDPVKIALARNNAEVYG--IADKIEFICGDFLLLA 140 (241)
T ss_dssp HHHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEESCHHHHG
T ss_pred HHHHHHHHhhhccCCCEEEECccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcC--CCcCeEEEECChHHhc
Confidence 3444444433 23678999999999999999999874 99999999999999999998876 3358999999998876
Q ss_pred CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEE
Q 021975 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
++++||+|++..+++|..++...+.++.++|||||++++..
T Consensus 141 -~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 141 -SFLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp -GGCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred -ccCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHHH
Confidence 56799999999999998877767778888889998866654
No 140
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.59 E-value=3.5e-15 Score=127.84 Aligned_cols=91 Identities=14% Similarity=0.277 Sum_probs=81.8
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccC-CCCCCC-CCccceEE
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV-CRLPFA-SGFVDAVH 242 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~-~~lp~~-~~~fD~V~ 242 (304)
.++.+|||||||+|.++..+++.+. +|+|+|+++.+++.++++ ..++.++++|+ ..+|++ +++||+|+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~~~fD~v~ 116 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA--RWAAYDFSPELLKLARAN--------APHADVYEWNGKGELPAGLGAPFGLIV 116 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHH--------CTTSEEEECCSCSSCCTTCCCCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHh--------CCCceEEEcchhhccCCcCCCCEEEEE
Confidence 3578999999999999999999865 999999999999999986 25799999999 678887 88999999
Q ss_pred ecchhccCCCHHHHHHHHHHhcccCcEEE
Q 021975 243 AGAALHCWPSPSNAVAEISRILRSGGVFV 271 (304)
Q Consensus 243 ~~~vl~h~~d~~~~l~~~~r~LkpgG~lv 271 (304)
+. .++..+++++.++|||||+++
T Consensus 117 ~~------~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 117 SR------RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp EE------SCCSGGGGGHHHHEEEEEEEE
T ss_pred eC------CCHHHHHHHHHHHcCCCcEEE
Confidence 97 477788999999999999999
No 141
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.59 E-value=5.5e-15 Score=136.31 Aligned_cols=115 Identities=18% Similarity=0.225 Sum_probs=95.5
Q ss_pred HHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCC
Q 021975 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (304)
Q Consensus 157 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~ 236 (304)
.+.......++.+|||||||+|.++..+++.+ ..+|+|+|+| .+++.|+++++.++ ...++.++++|+.+++++ +
T Consensus 54 ~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s-~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~-~ 128 (376)
T 3r0q_C 54 AVFQNKHHFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEAT-KMADHARALVKANN--LDHIVEVIEGSVEDISLP-E 128 (376)
T ss_dssp HHHTTTTTTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESS-TTHHHHHHHHHHTT--CTTTEEEEESCGGGCCCS-S
T ss_pred HHHhccccCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccH-HHHHHHHHHHHHcC--CCCeEEEEECchhhcCcC-C
Confidence 34444455678899999999999999999986 3599999999 99999999999887 456799999999998876 8
Q ss_pred ccceEEecchhccC---CCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 237 FVDAVHAGAALHCW---PSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 237 ~fD~V~~~~vl~h~---~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+||+|++..+.+++ .++..++.++.++|||||++++....
T Consensus 129 ~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 129 KVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp CEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred cceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 89999996544443 56888999999999999999875543
No 142
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.59 E-value=9.2e-15 Score=126.88 Aligned_cols=102 Identities=20% Similarity=0.350 Sum_probs=87.3
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--------CccCCCCeEEEEccCCC-CC--CC
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--------NTILTSNLALVRADVCR-LP--FA 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--------~~~~~~~i~~~~~d~~~-lp--~~ 234 (304)
++.+|||||||+|.++..+++.++..+|+|+|+|+.+++.++++++.. + ..++.++.+|+.+ ++ ++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~---~~nv~~~~~D~~~~l~~~~~ 125 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHG---FQNINVLRGNAMKFLPNFFE 125 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCST---TTTEEEEECCTTSCGGGTSC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccC---CCcEEEEeccHHHHHHHhcc
Confidence 567899999999999999999987779999999999999999988764 4 2579999999986 55 66
Q ss_pred CCccceEEecchhccCCCH-------------HHHHHHHHHhcccCcEEEEEEe
Q 021975 235 SGFVDAVHAGAALHCWPSP-------------SNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~-------------~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
.+++|.|+.. ++++ ..+++++.++|||||+|++.+.
T Consensus 126 ~~~~d~v~~~-----~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 126 KGQLSKMFFC-----FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp TTCEEEEEEE-----SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccccCEEEEE-----CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 7899998854 3555 4799999999999999999763
No 143
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.59 E-value=1.3e-14 Score=124.60 Aligned_cols=120 Identities=17% Similarity=0.199 Sum_probs=99.3
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC
Q 021975 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (304)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (304)
......+...+...++.+|||+|||+|.++..+++..+..+|+++|+++.+++.|+++++..+ ...++.++.+|+...
T Consensus 40 ~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~ 117 (233)
T 2gpy_A 40 LLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALG--LESRIELLFGDALQL 117 (233)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTT--CTTTEEEECSCGGGS
T ss_pred HHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECCHHHH
Confidence 444556666666667889999999999999999998766799999999999999999998876 345799999998764
Q ss_pred -CCC--CCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 232 -PFA--SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 232 -p~~--~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+.. +++||+|++....+ +...+++++.++|||||++++.+..
T Consensus 118 ~~~~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 118 GEKLELYPLFDVLFIDAAKG---QYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp HHHHTTSCCEEEEEEEGGGS---CHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred HHhcccCCCccEEEECCCHH---HHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 322 57899999987754 7788999999999999999997543
No 144
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.59 E-value=3.3e-15 Score=136.15 Aligned_cols=120 Identities=18% Similarity=0.229 Sum_probs=100.2
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC
Q 021975 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (304)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (304)
+...+.+.+.+...++.+|||+|||+|.++..+++.++..+++|+|+|+.+++.++++++..+ ..+.++.+|+...
T Consensus 182 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~----~~~~~~~~d~~~~ 257 (343)
T 2pjd_A 182 DVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANG----VEGEVFASNVFSE 257 (343)
T ss_dssp CHHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTT----CCCEEEECSTTTT
T ss_pred cHHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC----CCCEEEEcccccc
Confidence 344566666665555779999999999999999999877799999999999999999998766 3467889998765
Q ss_pred CCCCCccceEEecchhcc-----CCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 232 PFASGFVDAVHAGAALHC-----WPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 232 p~~~~~fD~V~~~~vl~h-----~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+ +++||+|+++.++|+ ..+...+++++.++|||||.+++.....
T Consensus 258 ~--~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 258 V--KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp C--CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred c--cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 4 678999999998875 3456789999999999999999988654
No 145
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.58 E-value=9.4e-15 Score=127.11 Aligned_cols=121 Identities=12% Similarity=0.143 Sum_probs=96.1
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC
Q 021975 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (304)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (304)
.....++.......++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|+++++..+ ...++.++.+|+.+
T Consensus 49 ~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g--~~~~v~~~~~d~~~ 126 (248)
T 3tfw_A 49 ANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAG--VDQRVTLREGPALQ 126 (248)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTT--CTTTEEEEESCHHH
T ss_pred HHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHH
Confidence 33344444444555678999999999999999999855 6799999999999999999998877 45689999999865
Q ss_pred -CCCC--CCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 231 -LPFA--SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 231 -lp~~--~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++.. .++||+|++... ..+...+++++.++|||||+|++.+...
T Consensus 127 ~l~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 127 SLESLGECPAFDLIFIDAD---KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp HHHTCCSCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred HHHhcCCCCCeEEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 3322 348999998653 3356778999999999999999877654
No 146
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.58 E-value=1.1e-14 Score=127.60 Aligned_cols=118 Identities=14% Similarity=0.106 Sum_probs=94.9
Q ss_pred HHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh---cCccCCCCeEEEEccCCCC--
Q 021975 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ---DNTILTSNLALVRADVCRL-- 231 (304)
Q Consensus 157 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~i~~~~~d~~~l-- 231 (304)
++..++...++.+|||+|||+|.++..++..++..+++|+|+++.+++.|+++++. .+ ...++.++++|+.+.
T Consensus 27 lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~--l~~~v~~~~~D~~~~~~ 104 (260)
T 2ozv_A 27 LLASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAA--FSARIEVLEADVTLRAK 104 (260)
T ss_dssp HHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTT--TGGGEEEEECCTTCCHH
T ss_pred HHHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCC--CcceEEEEeCCHHHHhh
Confidence 34455555567899999999999999999998777999999999999999999887 65 334699999999886
Q ss_pred -----CCCCCccceEEecchhcc------------------CCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 232 -----PFASGFVDAVHAGAALHC------------------WPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 232 -----p~~~~~fD~V~~~~vl~h------------------~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
++++++||+|+++-.+.. ..+...+++++.++|||||+|++....
T Consensus 105 ~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 172 (260)
T 2ozv_A 105 ARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRP 172 (260)
T ss_dssp HHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred hhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcH
Confidence 256789999999732221 124678899999999999999987643
No 147
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.58 E-value=3.6e-15 Score=129.68 Aligned_cols=118 Identities=19% Similarity=0.125 Sum_probs=88.7
Q ss_pred HHHhhcccCCCeEEEEcCCccHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHHHhc---CccCCCC------------
Q 021975 158 AQEYFKSAQGGLLVDVSCGSGLFSRKFAKS--GTYSGVVALDFSENMLRQCYDFIKQD---NTILTSN------------ 220 (304)
Q Consensus 158 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~~v~giD~s~~~~~~a~~~~~~~---~~~~~~~------------ 220 (304)
+...+...++.+|||+|||+|.++..+++. .+..+|+|+|+|+.+++.|++++... +. ..+
T Consensus 43 ~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 120 (250)
T 1o9g_A 43 ALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL--TARELERREQSERFG 120 (250)
T ss_dssp HHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH--HHHHHHHHHHHHHHC
T ss_pred HHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc--cccchhhhhhhhhcc
Confidence 333333335679999999999999999887 44459999999999999999887654 21 111
Q ss_pred -------------eE-------------EEEccCCCCCC-----CCCccceEEecchhccCCC---------HHHHHHHH
Q 021975 221 -------------LA-------------LVRADVCRLPF-----ASGFVDAVHAGAALHCWPS---------PSNAVAEI 260 (304)
Q Consensus 221 -------------i~-------------~~~~d~~~lp~-----~~~~fD~V~~~~vl~h~~d---------~~~~l~~~ 260 (304)
+. ++++|+.+... ...+||+|+++..+.+..+ ...+++++
T Consensus 121 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~ 200 (250)
T 1o9g_A 121 KPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSL 200 (250)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHH
T ss_pred cccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHH
Confidence 55 99999877421 3458999999876665543 34789999
Q ss_pred HHhcccCcEEEEEEeCC
Q 021975 261 SRILRSGGVFVGTTFLR 277 (304)
Q Consensus 261 ~r~LkpgG~lvi~~~~~ 277 (304)
.++|||||+++++....
T Consensus 201 ~~~LkpgG~l~~~~~~~ 217 (250)
T 1o9g_A 201 ASALPAHAVIAVTDRSR 217 (250)
T ss_dssp HHHSCTTCEEEEEESSS
T ss_pred HHhcCCCcEEEEeCcch
Confidence 99999999999955443
No 148
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.58 E-value=6.8e-15 Score=135.47 Aligned_cols=101 Identities=19% Similarity=0.218 Sum_probs=89.3
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEec
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (304)
.+..+|||||||+|.++..+++.++..+++++|+ +.+++.+++ ..++.++.+|+.+ +++. ||+|++.
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~~~--~D~v~~~ 274 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP---------LSGIEHVGGDMFA-SVPQ--GDAMILK 274 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCCC--EEEEEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh---------cCCCEEEeCCccc-CCCC--CCEEEEe
Confidence 4567999999999999999999988889999999 888877764 2569999999987 6654 9999999
Q ss_pred chhccCCCHH--HHHHHHHHhcccCcEEEEEEeCCC
Q 021975 245 AALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 245 ~vl~h~~d~~--~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
++|||++++. .+|++++++|||||+|++.++..+
T Consensus 275 ~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 310 (372)
T 1fp1_D 275 AVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILP 310 (372)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred cccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 9999999998 999999999999999999987653
No 149
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.58 E-value=2e-14 Score=126.83 Aligned_cols=119 Identities=13% Similarity=0.155 Sum_probs=95.8
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC
Q 021975 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (304)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (304)
+.+.+.+.+.+. .++.+|||+|||+|.++..++...+..+++|+|+|+.+++.++++.+..+. .++.++++|+...
T Consensus 96 e~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~---~~v~~~~~d~~~~ 171 (276)
T 2b3t_A 96 ECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI---KNIHILQSDWFSA 171 (276)
T ss_dssp HHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC---CSEEEECCSTTGG
T ss_pred HHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEcchhhh
Confidence 344455555554 457799999999999999999886677999999999999999999988762 4799999999763
Q ss_pred CCCCCccceEEec-------------chhccCC------------CHHHHHHHHHHhcccCcEEEEEEe
Q 021975 232 PFASGFVDAVHAG-------------AALHCWP------------SPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 232 p~~~~~fD~V~~~-------------~vl~h~~------------d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
+++++||+|+++ .+++|.+ +...+++++.++|||||++++...
T Consensus 172 -~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~ 239 (276)
T 2b3t_A 172 -LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG 239 (276)
T ss_dssp -GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred -cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 446789999997 3555544 346789999999999999998753
No 150
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.58 E-value=1.2e-14 Score=119.03 Aligned_cols=105 Identities=15% Similarity=0.176 Sum_probs=87.3
Q ss_pred HHHHHhhcc--cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC
Q 021975 156 KMAQEYFKS--AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (304)
Q Consensus 156 ~~l~~~l~~--~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 233 (304)
+.+.+.+.. .++.+|||+|||+|.++..+++.+ +|+|+|+|+.+++. . .++.++++|+.+ ++
T Consensus 11 ~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~--------~----~~~~~~~~d~~~-~~ 74 (170)
T 3q87_B 11 YTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES--------H----RGGNLVRADLLC-SI 74 (170)
T ss_dssp HHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT--------C----SSSCEEECSTTT-TB
T ss_pred HHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc--------c----cCCeEEECChhh-hc
Confidence 344444444 567799999999999999999987 99999999999987 1 468899999987 66
Q ss_pred CCCccceEEecchhccCCCH---------HHHHHHHHHhcccCcEEEEEEeCC
Q 021975 234 ASGFVDAVHAGAALHCWPSP---------SNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~---------~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++++||+|+++..+++.++. ..+++++.+.| |||++++.+...
T Consensus 75 ~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~ 126 (170)
T 3q87_B 75 NQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA 126 (170)
T ss_dssp CGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG
T ss_pred ccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC
Confidence 67899999999888877655 57889999999 999999988654
No 151
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.57 E-value=7.1e-15 Score=128.03 Aligned_cols=104 Identities=13% Similarity=-0.007 Sum_probs=90.5
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCC---CCccceE
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA---SGFVDAV 241 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~---~~~fD~V 241 (304)
.++.+|||||||+|..+..++...+..+|+++|+++.+++.++++.+..++ .++.++++|+++++.. .++||+|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l---~~v~~~~~d~~~~~~~~~~~~~fD~I 155 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL---KGARALWGRAEVLAREAGHREAYARA 155 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC---SSEEEEECCHHHHTTSTTTTTCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC---CceEEEECcHHHhhcccccCCCceEE
Confidence 357899999999999999999887778999999999999999999988873 4699999999887643 4789999
Q ss_pred EecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 242 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 242 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
++.. +.+...+++.+.++|||||++++..-
T Consensus 156 ~s~a----~~~~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 156 VARA----VAPLCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp EEES----SCCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred EECC----cCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9965 35778899999999999999998763
No 152
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.57 E-value=5.6e-16 Score=130.73 Aligned_cols=116 Identities=18% Similarity=0.115 Sum_probs=73.7
Q ss_pred HHHHHHhhcc-cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC
Q 021975 155 FKMAQEYFKS-AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (304)
Q Consensus 155 ~~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 233 (304)
.+.+.+.+.. .++.+|||+|||+|.++..+++.++..+++|+|+++.+++.+++++...+ .++.++++|+.+ ++
T Consensus 18 ~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~d~~~-~~ 92 (215)
T 4dzr_A 18 VEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFG----AVVDWAAADGIE-WL 92 (215)
T ss_dssp HHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-----------------------CCHHHHHH-HH
T ss_pred HHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhC----CceEEEEcchHh-hh
Confidence 3445555544 56789999999999999999999777799999999999999999887765 278899999877 55
Q ss_pred CC-----CccceEEecchhc------cCCCH--------------------HHHHHHHHHhcccCcEEEEEEe
Q 021975 234 AS-----GFVDAVHAGAALH------CWPSP--------------------SNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 234 ~~-----~~fD~V~~~~vl~------h~~d~--------------------~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
++ ++||+|+++..++ |+... ..+++++.++|||||++++.+.
T Consensus 93 ~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 93 IERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp HHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred hhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 55 8999999964433 22211 6788999999999999555444
No 153
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.57 E-value=1.4e-14 Score=124.74 Aligned_cols=114 Identities=14% Similarity=0.140 Sum_probs=93.9
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC
Q 021975 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (304)
Q Consensus 153 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp 232 (304)
.....+.+.+...++.+|||||||+|.++..+++.++ .+|+++|+++.+++.|+++++..+ ..++.++.+|+ ..+
T Consensus 78 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~-~~~ 152 (235)
T 1jg1_A 78 HMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAG---VKNVHVILGDG-SKG 152 (235)
T ss_dssp HHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCG-GGC
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcC---CCCcEEEECCc-ccC
Confidence 3445566666666788999999999999999999874 599999999999999999988776 25699999997 334
Q ss_pred CCCC-ccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 233 FASG-FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 233 ~~~~-~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+++. .||+|++..++++++ +++.+.|||||++++.....
T Consensus 153 ~~~~~~fD~Ii~~~~~~~~~------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 153 FPPKAPYDVIIVTAGAPKIP------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp CGGGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred CCCCCCccEEEECCcHHHHH------HHHHHhcCCCcEEEEEEecC
Confidence 4443 599999999999886 37889999999999988654
No 154
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.57 E-value=1.1e-14 Score=128.39 Aligned_cols=109 Identities=13% Similarity=0.213 Sum_probs=84.5
Q ss_pred CCCeEEEEcCCccH----HHHHHHHh-CC---CCeEEEEeCCHHHHHHHHHHHHhc----------------------C-
Q 021975 166 QGGLLVDVSCGSGL----FSRKFAKS-GT---YSGVVALDFSENMLRQCYDFIKQD----------------------N- 214 (304)
Q Consensus 166 ~~~~vLDiGcG~G~----~~~~l~~~-~~---~~~v~giD~s~~~~~~a~~~~~~~----------------------~- 214 (304)
++.+|||+|||+|. ++..+++. +. ..+|+|+|+|+.+++.|++..... +
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35689999999998 44445554 21 248999999999999999864100 0
Q ss_pred cc-----CCCCeEEEEccCCCCCCC-CCccceEEecchhccCCCH--HHHHHHHHHhcccCcEEEEEE
Q 021975 215 TI-----LTSNLALVRADVCRLPFA-SGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 215 ~~-----~~~~i~~~~~d~~~lp~~-~~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~lvi~~ 274 (304)
.. ...++.|.++|+.+.|++ .+.||+|+|.+|++|+.++ .++++++++.|||||+|++..
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 00 013699999999886665 5789999999999999766 689999999999999998843
No 155
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.57 E-value=1.4e-14 Score=132.22 Aligned_cols=114 Identities=19% Similarity=0.278 Sum_probs=95.2
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (304)
+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+++ +++.|+++++.++ ...++.++.+|+.+++++
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~--l~~~v~~~~~d~~~~~~~- 114 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSNN--LTDRIVVIPGKVEEVSLP- 114 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-HHHHHHHHHHHTT--CTTTEEEEESCTTTCCCS-
T ss_pred HHHHhccccCCcCEEEEcCCCccHHHHHHHhCC-CCEEEEECCHH-HHHHHHHHHHHcC--CCCcEEEEEcchhhCCCC-
Confidence 445555555678899999999999999999875 46999999996 8899999988877 457899999999988765
Q ss_pred CccceEEecchhccCC--CHHHHHHHHHHhcccCcEEEEEE
Q 021975 236 GFVDAVHAGAALHCWP--SPSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~--d~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
++||+|++..+++|+. +....+.++.++|||||++++..
T Consensus 115 ~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 115 EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 5899999998888875 34578889999999999998643
No 156
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.57 E-value=1.3e-14 Score=124.17 Aligned_cols=105 Identities=14% Similarity=0.157 Sum_probs=87.5
Q ss_pred CCeEEEEcCCccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCccCC-CCeEEEEccCCCC-C-CCCCccceEE
Q 021975 167 GGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILT-SNLALVRADVCRL-P-FASGFVDAVH 242 (304)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~~~~-~~i~~~~~d~~~l-p-~~~~~fD~V~ 242 (304)
+.+|||||||+|..+..+++.. ++.+|+++|+++.+++.|+++++..+ .. .++.++.+|+.+. + +++++||+|+
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~~i~~~~gda~~~l~~~~~~~fD~V~ 134 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG--YSPSRVRFLLSRPLDVMSRLANDSYQLVF 134 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT--CCGGGEEEECSCHHHHGGGSCTTCEEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCcCcEEEEEcCHHHHHHHhcCCCcCeEE
Confidence 3499999999999999999874 36799999999999999999999887 34 5899999998653 2 3368999999
Q ss_pred ecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 243 AGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 243 ~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+.... .+...+++++.++|||||++++....
T Consensus 135 ~d~~~---~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 135 GQVSP---MDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp ECCCT---TTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred EcCcH---HHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 87543 45677899999999999999986544
No 157
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.57 E-value=1.7e-14 Score=132.64 Aligned_cols=102 Identities=15% Similarity=0.212 Sum_probs=89.0
Q ss_pred ccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEe
Q 021975 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (304)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (304)
..+..+|||||||+|.++..+++..+..+++++|+ +.+++.+++ ..++.++.+|+.+ +++++ |+|++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~p~~--D~v~~ 267 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA---------FSGVEHLGGDMFD-GVPKG--DAIFI 267 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCCCC--SEEEE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh---------cCCCEEEecCCCC-CCCCC--CEEEE
Confidence 34567999999999999999999988889999999 888877654 2689999999987 66654 99999
Q ss_pred cchhccCCCHH--HHHHHHHHhcccCcEEEEEEeCCC
Q 021975 244 GAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 244 ~~vl~h~~d~~--~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
.++|||++++. .+|++++++|||||+|++.+....
T Consensus 268 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 268 KWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp ESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred echhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 99999998775 789999999999999999997754
No 158
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.57 E-value=1.9e-14 Score=127.36 Aligned_cols=112 Identities=16% Similarity=0.193 Sum_probs=93.7
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (304)
..+...+. ++.+|||+|||+|.++..+++.+.. +|+|+|+|+.+++.|+++++.++ ...++.++++|+.+++. +
T Consensus 117 ~~l~~~~~--~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~--~~~~v~~~~~D~~~~~~-~ 190 (278)
T 2frn_A 117 VRMAKVAK--PDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNK--VEDRMSAYNMDNRDFPG-E 190 (278)
T ss_dssp HHHHHHCC--TTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTT--CTTTEEEECSCTTTCCC-C
T ss_pred HHHHHhCC--CCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcC--CCceEEEEECCHHHhcc-c
Confidence 33444433 4789999999999999999999763 79999999999999999999887 34569999999998876 7
Q ss_pred CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++||+|++... .+...++.++.++|||||++++.++..
T Consensus 191 ~~fD~Vi~~~p----~~~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 191 NIADRILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp SCEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCccEEEECCc----hhHHHHHHHHHHHCCCCeEEEEEEeec
Confidence 79999998543 345678999999999999999988764
No 159
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.56 E-value=3.9e-14 Score=120.97 Aligned_cols=107 Identities=23% Similarity=0.351 Sum_probs=88.8
Q ss_pred ccCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCc--cCCCCeEEEEccCCCCCCCCCccce
Q 021975 164 SAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNT--ILTSNLALVRADVCRLPFASGFVDA 240 (304)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~--~~~~~i~~~~~d~~~lp~~~~~fD~ 240 (304)
..++.+|||+|||+|.++..+++. ++..+|+|+|+++.+++.++++++..+. ....++.++.+|+...+..+++||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 456789999999999999999987 4556999999999999999998876531 0035799999998766555678999
Q ss_pred EEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 241 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 241 V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
|++..+++++. +++.++|||||++++.+..
T Consensus 155 i~~~~~~~~~~------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 155 IHVGAAAPVVP------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEECSBBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred EEECCchHHHH------HHHHHhcCCCcEEEEEEec
Confidence 99999888764 6889999999999998754
No 160
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.56 E-value=6.9e-14 Score=120.87 Aligned_cols=116 Identities=13% Similarity=0.123 Sum_probs=98.1
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC
Q 021975 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (304)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (304)
......+...+...++.+|||+|||+|.++..+++.+ .+++++|+++.+++.|+++.+..+ ...++.++.+|+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~ 152 (248)
T 2yvl_A 77 PKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEVA--GEVWTFEAVEEFYKTAQKNLKKFN--LGKNVKFFNVDFKDA 152 (248)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHHHHTT--CCTTEEEECSCTTTS
T ss_pred chhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHhC--CEEEEEecCHHHHHHHHHHHHHcC--CCCcEEEEEcChhhc
Confidence 3444566667776778899999999999999999884 499999999999999999988776 346899999999875
Q ss_pred CCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
.+++++||+|++ +.+++..+++++.++|||||++++.++.
T Consensus 153 ~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 153 EVPEGIFHAAFV-----DVREPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp CCCTTCBSEEEE-----CSSCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred ccCCCcccEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 435678999997 4568888999999999999999999875
No 161
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.56 E-value=2e-14 Score=133.94 Aligned_cols=123 Identities=11% Similarity=0.025 Sum_probs=96.2
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHH-------HHHHHhcCccCCCCeEEEE
Q 021975 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQC-------YDFIKQDNTILTSNLALVR 225 (304)
Q Consensus 153 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a-------~~~~~~~~~~~~~~i~~~~ 225 (304)
.....+.+.+...++.+|||||||+|.++..+++..+..+|+|+|+++.+++.| +++++..+. ...++.++.
T Consensus 229 ~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl-~~~nV~~i~ 307 (433)
T 1u2z_A 229 NFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGM-RLNNVEFSL 307 (433)
T ss_dssp HHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTB-CCCCEEEEE
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCC-CCCceEEEE
Confidence 444556666666778899999999999999999875445899999999999988 888877651 026899999
Q ss_pred ccCCCC--CC--CCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 226 ADVCRL--PF--ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 226 ~d~~~l--p~--~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+|.... ++ ..++||+|+++.++ +.+++..+|+++.++|||||++++.....
T Consensus 308 gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 308 KKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp SSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSCSS
T ss_pred cCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeeccC
Confidence 865432 22 24689999997766 44677888999999999999999986544
No 162
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.56 E-value=2.3e-14 Score=125.43 Aligned_cols=109 Identities=17% Similarity=0.095 Sum_probs=87.1
Q ss_pred CCCeEEEEcCCc--cHHHHHH-HHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC------CCCC
Q 021975 166 QGGLLVDVSCGS--GLFSRKF-AKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------FASG 236 (304)
Q Consensus 166 ~~~~vLDiGcG~--G~~~~~l-~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~~~~ 236 (304)
...+|||||||+ +.++..+ .+..+..+|+++|.|+.|++.|++++...+ ..++.++++|+.+++ ...+
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~---~~~~~~v~aD~~~~~~~l~~~~~~~ 154 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP---EGRTAYVEADMLDPASILDAPELRD 154 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS---SSEEEEEECCTTCHHHHHTCHHHHT
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC---CCcEEEEEecccChhhhhccccccc
Confidence 346899999997 3344444 445677899999999999999999886532 247999999998852 1134
Q ss_pred ccc-----eEEecchhccCCC---HHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 237 FVD-----AVHAGAALHCWPS---PSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 237 ~fD-----~V~~~~vl~h~~d---~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
.|| .|+++.+|||+++ +..+++++.+.|+|||+|++++...
T Consensus 155 ~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 155 TLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp TCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred ccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 566 5889999999998 5789999999999999999998875
No 163
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.56 E-value=4.4e-15 Score=127.39 Aligned_cols=107 Identities=17% Similarity=0.199 Sum_probs=79.5
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCC-HHHHHHH---HHHHHhcCccCCCCeEEEEccCCCCCCC-CCccc
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFS-ENMLRQC---YDFIKQDNTILTSNLALVRADVCRLPFA-SGFVD 239 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s-~~~~~~a---~~~~~~~~~~~~~~i~~~~~d~~~lp~~-~~~fD 239 (304)
.++.+|||||||+|.++..+++..+..+|+|+|+| +.+++.| +++.+..+ ..++.++++|+..+|.. .+.+|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~---~~~v~~~~~d~~~l~~~~~d~v~ 99 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGG---LSNVVFVIAAAESLPFELKNIAD 99 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTC---CSSEEEECCBTTBCCGGGTTCEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcC---CCCeEEEEcCHHHhhhhccCeEE
Confidence 35779999999999999999977667799999999 6677666 66665554 35799999999988631 13444
Q ss_pred eEEecchh----cc-CCCHHHHHHHHHHhcccCcEEEEEE
Q 021975 240 AVHAGAAL----HC-WPSPSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 240 ~V~~~~vl----~h-~~d~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
.|.+.+.. +| ..++..+++++.++|||||++++.+
T Consensus 100 ~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 100 SISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp EEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 44443321 11 1244578999999999999999843
No 164
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.55 E-value=3.1e-14 Score=130.75 Aligned_cols=102 Identities=21% Similarity=0.221 Sum_probs=89.0
Q ss_pred ccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEe
Q 021975 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (304)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (304)
..+..+|||||||+|.++..+++..+..+++++|+ +.+++.+++ ..++.++.+|+.+ |++.+ |+|++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~D~~~-~~p~~--D~v~~ 265 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ---------FPGVTHVGGDMFK-EVPSG--DTILM 265 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCCCC--SEEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh---------cCCeEEEeCCcCC-CCCCC--CEEEe
Confidence 34568999999999999999999988889999999 888777654 2689999999987 77654 99999
Q ss_pred cchhccCCCHH--HHHHHHHHhcccCcEEEEEEeCCC
Q 021975 244 GAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 244 ~~vl~h~~d~~--~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
.++|||+++.. .+|++++++|||||+|++.+....
T Consensus 266 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 266 KWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred hHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 99999998664 789999999999999999987754
No 165
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.55 E-value=2.3e-14 Score=116.74 Aligned_cols=100 Identities=21% Similarity=0.251 Sum_probs=86.5
Q ss_pred ccCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC--------CC
Q 021975 164 SAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--------FA 234 (304)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--------~~ 234 (304)
..++.+|||+|||+|.++..+++. ++..+++|+|+++ +++ ..++.++.+|+.+.+ ++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~-------------~~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP-------------IVGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC-------------CTTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc-------------cCcEEEEEcccccchhhhhhhccCC
Confidence 456789999999999999999988 5567999999998 642 146899999998876 67
Q ss_pred CCccceEEecchhccCCCH-----------HHHHHHHHHhcccCcEEEEEEeCC
Q 021975 235 SGFVDAVHAGAALHCWPSP-----------SNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~-----------~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+++||+|++..++++..+. ..+++++.++|||||.+++.++..
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 7899999999999888776 689999999999999999988765
No 166
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.55 E-value=3.4e-14 Score=121.09 Aligned_cols=121 Identities=16% Similarity=0.128 Sum_probs=95.6
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC
Q 021975 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (304)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (304)
......+.......++.+|||||||+|.++..+++..+ ..+++++|+++.+++.|+++++..+ ...++.++.+|+.+
T Consensus 44 ~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~ 121 (223)
T 3duw_A 44 PTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERAN--LNDRVEVRTGLALD 121 (223)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCHHH
T ss_pred HHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHH
Confidence 34444555555556678999999999999999999855 5699999999999999999998877 34579999999865
Q ss_pred C-C-CC---CCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 231 L-P-FA---SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 231 l-p-~~---~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
. + +. .++||+|++....+ +...+++++.++|||||++++.....
T Consensus 122 ~~~~~~~~~~~~fD~v~~d~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 122 SLQQIENEKYEPFDFIFIDADKQ---NNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp HHHHHHHTTCCCCSEEEECSCGG---GHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred HHHHHHhcCCCCcCEEEEcCCcH---HHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 3 1 11 15799999876533 45688999999999999888876544
No 167
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.55 E-value=3.6e-14 Score=121.27 Aligned_cols=107 Identities=21% Similarity=0.288 Sum_probs=89.5
Q ss_pred ccCCCeEEEEcCCccHHHHHHHHhC-----CCCeEEEEeCCHHHHHHHHHHHHhcCcc--CCCCeEEEEccCCCCC----
Q 021975 164 SAQGGLLVDVSCGSGLFSRKFAKSG-----TYSGVVALDFSENMLRQCYDFIKQDNTI--LTSNLALVRADVCRLP---- 232 (304)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~-----~~~~v~giD~s~~~~~~a~~~~~~~~~~--~~~~i~~~~~d~~~lp---- 232 (304)
..++.+|||||||+|.++..+++.. +..+|+|+|+++.+++.|+++++..+.. ...++.++.+|+....
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 4567899999999999999999875 4569999999999999999998776400 0367999999997754
Q ss_pred CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
...++||+|++..+++|+ ++++.++|||||++++....
T Consensus 158 ~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 158 KELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEEE
T ss_pred ccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEcc
Confidence 456789999999998876 47889999999999998864
No 168
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.55 E-value=1.8e-14 Score=121.79 Aligned_cols=108 Identities=17% Similarity=0.198 Sum_probs=89.1
Q ss_pred hcccCCCeEEEEcCCccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC-CCCCCccc
Q 021975 162 FKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-PFASGFVD 239 (304)
Q Consensus 162 l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p~~~~~fD 239 (304)
....++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|+++++..+ ...++.++.+|+.+. +..++ ||
T Consensus 52 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~-fD 128 (210)
T 3c3p_A 52 ARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNG--LIDRVELQVGDPLGIAAGQRD-ID 128 (210)
T ss_dssp HHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHS--GGGGEEEEESCHHHHHTTCCS-EE
T ss_pred HHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC--CCceEEEEEecHHHHhccCCC-CC
Confidence 3334578999999999999999998854 6799999999999999999998776 345799999998653 44346 99
Q ss_pred eEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 240 AVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 240 ~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
+|++... ..+...+++++.++|||||++++.+.
T Consensus 129 ~v~~~~~---~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 129 ILFMDCD---VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp EEEEETT---TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred EEEEcCC---hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 9998743 45778899999999999999988654
No 169
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.54 E-value=1.7e-14 Score=131.85 Aligned_cols=101 Identities=17% Similarity=0.223 Sum_probs=88.8
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEec
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (304)
.+..+|||||||+|.++..+++..+..+++++|+ +.+++.+++ ..++.++.+|+.+ ++++ ||+|++.
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~p~--~D~v~~~ 253 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG---------SNNLTYVGGDMFT-SIPN--ADAVLLK 253 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------BTTEEEEECCTTT-CCCC--CSEEEEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc---------CCCcEEEeccccC-CCCC--ccEEEee
Confidence 3567999999999999999999988789999999 999887764 1469999999976 5553 9999999
Q ss_pred chhccCCCHH--HHHHHHHHhccc---CcEEEEEEeCCC
Q 021975 245 AALHCWPSPS--NAVAEISRILRS---GGVFVGTTFLRY 278 (304)
Q Consensus 245 ~vl~h~~d~~--~~l~~~~r~Lkp---gG~lvi~~~~~~ 278 (304)
++|||++++. .++++++++||| ||+|++.++...
T Consensus 254 ~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 254 YILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVID 292 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEEC
T ss_pred hhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecC
Confidence 9999999988 999999999999 999999987653
No 170
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.54 E-value=9.3e-15 Score=141.75 Aligned_cols=107 Identities=16% Similarity=0.234 Sum_probs=92.1
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC--CCCCCccceEEe
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVHA 243 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p~~~~~fD~V~~ 243 (304)
++.+|||||||.|.++..|++.|. +|+|||+++.+++.|+......+ ..++.+.+++++++ ++.+++||+|++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga--~V~giD~~~~~i~~a~~~a~~~~---~~~~~~~~~~~~~~~~~~~~~~fD~v~~ 140 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA--TIVGIDFQQENINVCRALAEENP---DFAAEFRVGRIEEVIAALEEGEFDLAIG 140 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTST---TSEEEEEECCHHHHHHHCCTTSCSEEEE
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC--EEEEECCCHHHHHHHHHHHHhcC---CCceEEEECCHHHHhhhccCCCccEEEE
Confidence 467999999999999999999987 99999999999999999887765 25799999999887 456789999999
Q ss_pred cchhccCCCHHH--HHHHHHHhcccCcEEEEEEeCC
Q 021975 244 GAALHCWPSPSN--AVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 244 ~~vl~h~~d~~~--~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
..+|||++|+.. .+..+.+.|+++|..++.....
T Consensus 141 ~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 141 LSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp ESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred CcchhcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 999999998863 3567788899998877766554
No 171
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.54 E-value=8.2e-14 Score=126.40 Aligned_cols=122 Identities=17% Similarity=0.199 Sum_probs=93.8
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcC-------cc-CCCCe
Q 021975 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDN-------TI-LTSNL 221 (304)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~-------~~-~~~~i 221 (304)
.......+...+...++.+|||+|||+|.++..+++. ++..+|+|+|+++.+++.|+++++..+ .. ...++
T Consensus 90 ~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v 169 (336)
T 2b25_A 90 FPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNV 169 (336)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCE
T ss_pred CHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCce
Confidence 3444556666667777889999999999999999987 666799999999999999999887521 00 12579
Q ss_pred EEEEccCCCC--CCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 222 ALVRADVCRL--PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 222 ~~~~~d~~~l--p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
.++.+|+.+. ++++++||+|++. .+++..+++++.++|||||+|++.....
T Consensus 170 ~~~~~d~~~~~~~~~~~~fD~V~~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 222 (336)
T 2b25_A 170 DFIHKDISGATEDIKSLTFDAVALD-----MLNPHVTLPVFYPHLKHGGVCAVYVVNI 222 (336)
T ss_dssp EEEESCTTCCC-------EEEEEEC-----SSSTTTTHHHHGGGEEEEEEEEEEESSH
T ss_pred EEEECChHHcccccCCCCeeEEEEC-----CCCHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 9999999876 4667789999984 3556668999999999999999877643
No 172
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.54 E-value=1.5e-14 Score=124.97 Aligned_cols=109 Identities=14% Similarity=0.096 Sum_probs=86.6
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHh----CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS----GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~----~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (304)
..+...+...++.+|||||||+|..+..+++. ++..+|+|+|+++.+++.|+. ...++.++++|+.+.
T Consensus 71 ~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~--------~~~~v~~~~gD~~~~ 142 (236)
T 2bm8_A 71 AVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS--------DMENITLHQGDCSDL 142 (236)
T ss_dssp HHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG--------GCTTEEEEECCSSCS
T ss_pred HHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc--------cCCceEEEECcchhH
Confidence 33444444445679999999999999999987 566799999999999888862 236899999999884
Q ss_pred ---CCCC-CccceEEecchhccCCCHHHHHHHHHH-hcccCcEEEEEEe
Q 021975 232 ---PFAS-GFVDAVHAGAALHCWPSPSNAVAEISR-ILRSGGVFVGTTF 275 (304)
Q Consensus 232 ---p~~~-~~fD~V~~~~vl~h~~d~~~~l~~~~r-~LkpgG~lvi~~~ 275 (304)
+... .+||+|++... | .+...++.++.+ +|||||+|++.+.
T Consensus 143 ~~l~~~~~~~fD~I~~d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 143 TTFEHLREMAHPLIFIDNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp GGGGGGSSSCSSEEEEESS--C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred HHHHhhccCCCCEEEECCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 5333 47999998765 4 377889999997 9999999999764
No 173
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.54 E-value=1.5e-14 Score=123.35 Aligned_cols=120 Identities=15% Similarity=0.162 Sum_probs=94.9
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC
Q 021975 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (304)
Q Consensus 153 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (304)
.....+.......++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.++++++..+ ...++.++++|+.+.
T Consensus 51 ~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~ 128 (225)
T 3tr6_A 51 EQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAG--LSDKIGLRLSPAKDT 128 (225)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCHHHH
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCC--CCCceEEEeCCHHHH
Confidence 3344455554555678999999999999999999854 5799999999999999999998877 346799999998543
Q ss_pred -C-CCC----CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 232 -P-FAS----GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 232 -p-~~~----~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+ +.. ++||+|++... ..+...+++++.++|||||+|++.+...
T Consensus 129 ~~~~~~~~~~~~fD~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 129 LAELIHAGQAWQYDLIYIDAD---KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp HHHHHTTTCTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred HHHhhhccCCCCccEEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 2 111 78999997653 2356789999999999999999877654
No 174
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.54 E-value=2.9e-14 Score=128.39 Aligned_cols=119 Identities=17% Similarity=0.174 Sum_probs=94.7
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 234 (304)
..+...+...++.+|||+|||+|..+..+++.. ...+|+|+|+++.+++.++++++..+. .++.++++|+..++..
T Consensus 108 ~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~---~~v~~~~~D~~~~~~~ 184 (315)
T 1ixk_A 108 MYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV---LNVILFHSSSLHIGEL 184 (315)
T ss_dssp HHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC---CSEEEESSCGGGGGGG
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC---CeEEEEECChhhcccc
Confidence 344556667778899999999999999999874 346999999999999999999988762 4799999999887655
Q ss_pred CCccceEEec------chhccCCCH----------------HHHHHHHHHhcccCcEEEEEEeCC
Q 021975 235 SGFVDAVHAG------AALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 235 ~~~fD~V~~~------~vl~h~~d~----------------~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+++||+|++. .++++.++. ..+++++.++|||||+|++++..-
T Consensus 185 ~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 185 NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 6789999984 334443321 478999999999999999988654
No 175
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.54 E-value=7.2e-14 Score=127.74 Aligned_cols=126 Identities=20% Similarity=0.082 Sum_probs=103.1
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEcc
Q 021975 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD 227 (304)
Q Consensus 149 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d 227 (304)
+..+.+...+.......++.+|||+|||+|.++..++..+ +..+++|+|+++.+++.|+++++..+ .. ++.++++|
T Consensus 186 ~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g--~~-~i~~~~~D 262 (354)
T 3tma_A 186 SLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASG--LS-WIRFLRAD 262 (354)
T ss_dssp SCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTT--CT-TCEEEECC
T ss_pred CcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcC--CC-ceEEEeCC
Confidence 4445566667777776778899999999999999999976 66799999999999999999999887 23 89999999
Q ss_pred CCCCCCCCCccceEEecchhccCC--------CHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 228 VCRLPFASGFVDAVHAGAALHCWP--------SPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 228 ~~~lp~~~~~fD~V~~~~vl~h~~--------d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+.+++.+...||+|+++-...... ....+++++.++|||||.+++.+...
T Consensus 263 ~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~ 320 (354)
T 3tma_A 263 ARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP 320 (354)
T ss_dssp GGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH
T ss_pred hhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 999887777899999964432211 12578999999999999999998754
No 176
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.53 E-value=9.1e-14 Score=123.10 Aligned_cols=119 Identities=16% Similarity=0.096 Sum_probs=91.9
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHH-----HhcCccCC----CCeE
Q 021975 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDF-SENMLRQCYDFI-----KQDNTILT----SNLA 222 (304)
Q Consensus 153 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~-s~~~~~~a~~~~-----~~~~~~~~----~~i~ 222 (304)
.+.+.+.......++.+|||+|||+|.++..+++.+ ..+|+|+|+ ++.+++.++++. +..+ .. .++.
T Consensus 66 ~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~--~~~~~~~~v~ 142 (281)
T 3bzb_A 66 ALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCS--SETVKRASPK 142 (281)
T ss_dssp HHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC------------CCCE
T ss_pred HHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcc--cccCCCCCeE
Confidence 345555555544567899999999999999998876 358999999 899999999998 4333 11 3678
Q ss_pred EEEccCCCCC--C----CCCccceEEecchhccCCCHHHHHHHHHHhcc---c--CcEEEEEE
Q 021975 223 LVRADVCRLP--F----ASGFVDAVHAGAALHCWPSPSNAVAEISRILR---S--GGVFVGTT 274 (304)
Q Consensus 223 ~~~~d~~~lp--~----~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~Lk---p--gG~lvi~~ 274 (304)
+...+..+.. + .+++||+|++..+++|.++...+++++.++|| | ||++++..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 143 VVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp EEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred EEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 8866654421 1 35789999999999999999999999999999 9 99877654
No 177
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.53 E-value=9.4e-14 Score=119.35 Aligned_cols=106 Identities=23% Similarity=0.273 Sum_probs=85.0
Q ss_pred cccCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC---CCCCCCcc
Q 021975 163 KSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR---LPFASGFV 238 (304)
Q Consensus 163 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~---lp~~~~~f 238 (304)
...++.+|||+|||+|.++..+++. ++..+|+|+|+++.+++.+.++.+.. .++.++.+|+.+ +++.+++|
T Consensus 74 ~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-----~~v~~~~~d~~~~~~~~~~~~~~ 148 (233)
T 2ipx_A 74 HIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-----TNIIPVIEDARHPHKYRMLIAMV 148 (233)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-----TTEEEECSCTTCGGGGGGGCCCE
T ss_pred cCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-----CCeEEEEcccCChhhhcccCCcE
Confidence 3456789999999999999999987 45569999999999888777766543 579999999987 45557899
Q ss_pred ceEEecchhccCCCH-HHHHHHHHHhcccCcEEEEEEeC
Q 021975 239 DAVHAGAALHCWPSP-SNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 239 D~V~~~~vl~h~~d~-~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
|+|++... .++. ..++.++.++|||||++++....
T Consensus 149 D~V~~~~~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 149 DVIFADVA---QPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp EEEEECCC---CTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred EEEEEcCC---CccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 99999544 2233 45688999999999999996654
No 178
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.53 E-value=4e-14 Score=119.87 Aligned_cols=89 Identities=17% Similarity=0.296 Sum_probs=78.6
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEec
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (304)
.++.+|||||||+|.++..+. .+++|+|+++. ++.++.+|+.++++++++||+|++.
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~------------------~~~~~~~d~~~~~~~~~~fD~v~~~ 122 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL------------------DPRVTVCDMAQVPLEDESVDVAVFC 122 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS------------------STTEEESCTTSCSCCTTCEEEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC------------------CceEEEeccccCCCCCCCEeEEEEe
Confidence 456899999999999988773 39999999875 3568899999998888999999999
Q ss_pred chhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 245 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 245 ~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
.++|| .++..+++++.++|||||++++.++..
T Consensus 123 ~~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 123 LSLMG-TNIRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp SCCCS-SCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred hhccc-cCHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 99964 899999999999999999999998765
No 179
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.53 E-value=1.6e-14 Score=127.46 Aligned_cols=122 Identities=14% Similarity=0.153 Sum_probs=95.8
Q ss_pred HHHhhcccCCCeEEEEcCCccHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC---
Q 021975 158 AQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--- 233 (304)
Q Consensus 158 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~--- 233 (304)
+...+...++.+|||+|||+|..+..+++..++ .+|+|+|+++.+++.++++++..+. .++.++.+|+..++.
T Consensus 75 ~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~---~~v~~~~~D~~~~~~~~~ 151 (274)
T 3ajd_A 75 PPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV---LNTIIINADMRKYKDYLL 151 (274)
T ss_dssp HHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCHHHHHHHHH
T ss_pred HHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC---CcEEEEeCChHhcchhhh
Confidence 344556667889999999999999999986433 6999999999999999999988762 489999999977653
Q ss_pred -CCCccceEEec------chhc------------cCCCHHHHHHHHHHhcccCcEEEEEEeCCCCCCc
Q 021975 234 -ASGFVDAVHAG------AALH------------CWPSPSNAVAEISRILRSGGVFVGTTFLRYTSST 282 (304)
Q Consensus 234 -~~~~fD~V~~~------~vl~------------h~~d~~~~l~~~~r~LkpgG~lvi~~~~~~~~~~ 282 (304)
..++||+|++. .++. +......+++++.++|||||++++++.......+
T Consensus 152 ~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~en 219 (274)
T 3ajd_A 152 KNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEEN 219 (274)
T ss_dssp HTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSS
T ss_pred hccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHh
Confidence 25789999986 2222 2245678999999999999999998876544333
No 180
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.52 E-value=1.9e-13 Score=124.94 Aligned_cols=114 Identities=14% Similarity=0.206 Sum_probs=96.4
Q ss_pred HHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCcc
Q 021975 159 QEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFV 238 (304)
Q Consensus 159 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~f 238 (304)
...+......+|||||||+|.++..+++++|+.+++..|. +.+++.++++.+..+ ..+++++.+|+...|.+ .+
T Consensus 172 ~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~---~~rv~~~~gD~~~~~~~--~~ 245 (353)
T 4a6d_A 172 LTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE---EEQIDFQEGDFFKDPLP--EA 245 (353)
T ss_dssp HHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC-----CCSEEEEESCTTTSCCC--CC
T ss_pred HHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc---cCceeeecCccccCCCC--Cc
Confidence 3333444567999999999999999999999999999997 889999998876543 57899999999876654 47
Q ss_pred ceEEecchhccCCCHH--HHHHHHHHhcccCcEEEEEEeCCC
Q 021975 239 DAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 239 D~V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
|+|++.++||+++|+. .+|+++++.|+|||+|++.+....
T Consensus 246 D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~ 287 (353)
T 4a6d_A 246 DLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLD 287 (353)
T ss_dssp SEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCC
T ss_pred eEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeC
Confidence 9999999999999884 689999999999999999997653
No 181
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.52 E-value=6.2e-15 Score=127.84 Aligned_cols=121 Identities=9% Similarity=0.073 Sum_probs=96.6
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC
Q 021975 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (304)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (304)
.....++...+...++.+|||||||+|..+..+++..+ +.+|+++|+++.+++.|+++++..+ ...++.++.+|+.+
T Consensus 46 ~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~~~~i~~~~gda~~ 123 (242)
T 3r3h_A 46 PEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK--QEHKIKLRLGPALD 123 (242)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT--CTTTEEEEESCHHH
T ss_pred HHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHH
Confidence 33444555555555678999999999999999998753 6799999999999999999998887 45689999999865
Q ss_pred CC-CC-----CCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 231 LP-FA-----SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 231 lp-~~-----~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
.. .. +++||+|++... ..+...+++++.++|||||+|++.+...
T Consensus 124 ~l~~~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 124 TLHSLLNEGGEHQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp HHHHHHHHHCSSCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSS
T ss_pred HHHHHhhccCCCCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCcc
Confidence 32 11 478999998765 2356678999999999999999976554
No 182
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.52 E-value=4.4e-14 Score=122.81 Aligned_cols=118 Identities=14% Similarity=0.115 Sum_probs=94.3
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC-
Q 021975 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL- 231 (304)
Q Consensus 154 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l- 231 (304)
....+...+...++.+|||||||+|..+..+++..+ +.+++++|+++.+++.|+++++..+ ...++.++.+|+.+.
T Consensus 67 ~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g--~~~~i~~~~gda~~~l 144 (247)
T 1sui_A 67 EGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAG--VDHKIDFREGPALPVL 144 (247)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTT--CGGGEEEEESCHHHHH
T ss_pred HHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCCeEEEECCHHHHH
Confidence 334444444445678999999999999999999854 5799999999999999999998877 346899999998653
Q ss_pred C-C-----CCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 232 P-F-----ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 232 p-~-----~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+ + .+++||+|++... ..+...+++++.++|||||+|++....
T Consensus 145 ~~l~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~ 192 (247)
T 1sui_A 145 DEMIKDEKNHGSYDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNTL 192 (247)
T ss_dssp HHHHHSGGGTTCBSEEEECSC---STTHHHHHHHHHHHBCTTCCEEEECTT
T ss_pred HHHHhccCCCCCEEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecCC
Confidence 3 2 1578999998754 346788999999999999999886543
No 183
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.52 E-value=3.9e-14 Score=118.63 Aligned_cols=100 Identities=12% Similarity=0.282 Sum_probs=80.3
Q ss_pred ccCCCeEEEEcCCccHHHHHHHHhCC--CCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC---------
Q 021975 164 SAQGGLLVDVSCGSGLFSRKFAKSGT--YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--------- 232 (304)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--------- 232 (304)
..++.+|||+|||+|.++..+++..+ ..+|+|+|+++.. ...++.++++|+.+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~--------------~~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD--------------PIPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC--------------CCTTCEEEECCTTTTSSCCC-----
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC--------------CCCCceEEEccccchhhhhhccccc
Confidence 34577999999999999999998865 5799999999831 1257899999998876
Q ss_pred ----------------CCCCccceEEecchhccCC----CHH-------HHHHHHHHhcccCcEEEEEEeCC
Q 021975 233 ----------------FASGFVDAVHAGAALHCWP----SPS-------NAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 233 ----------------~~~~~fD~V~~~~vl~h~~----d~~-------~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+++++||+|++..++++.. +.. .+++++.++|||||.|++..+..
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLG 157 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCC
Confidence 5667999999988776642 222 37899999999999999977654
No 184
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.51 E-value=9.7e-14 Score=122.38 Aligned_cols=106 Identities=20% Similarity=0.214 Sum_probs=91.7
Q ss_pred ccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEe
Q 021975 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (304)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (304)
..++.+|||+|||+|.++..+++.++..+|+|+|+++.+++.|+++++.+++ .++.++.+|+.+.+. .++||+|++
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l---~~~~~~~~d~~~~~~-~~~~D~Vi~ 192 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKL---NNVIPILADNRDVEL-KDVADRVIM 192 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTC---SSEEEEESCGGGCCC-TTCEEEEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CCEEEEECChHHcCc-cCCceEEEE
Confidence 3457899999999999999999986567999999999999999999998873 578999999987743 578999999
Q ss_pred cchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 244 GAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 244 ~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
.... +...++.++.+.|||||++++.++..
T Consensus 193 d~p~----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 193 GYVH----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp CCCS----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCcc----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 7653 66778999999999999999988765
No 185
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.51 E-value=1.6e-13 Score=121.82 Aligned_cols=118 Identities=17% Similarity=0.166 Sum_probs=92.7
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC
Q 021975 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (304)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (304)
+.+.+.+.+.+...++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.|+++.+..+ ...++.++++|+...
T Consensus 109 e~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~--l~~~v~~~~~D~~~~ 185 (284)
T 1nv8_A 109 EELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHG--VSDRFFVRKGEFLEP 185 (284)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTT--CTTSEEEEESSTTGG
T ss_pred HHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECcchhh
Confidence 344555555555445679999999999999999998 67799999999999999999998877 344699999999773
Q ss_pred CCCCCcc---ceEEec------------chhccCC--------CHHHHHHHHH-HhcccCcEEEEEEe
Q 021975 232 PFASGFV---DAVHAG------------AALHCWP--------SPSNAVAEIS-RILRSGGVFVGTTF 275 (304)
Q Consensus 232 p~~~~~f---D~V~~~------------~vl~h~~--------d~~~~l~~~~-r~LkpgG~lvi~~~ 275 (304)
++ ++| |+|+++ .+. |.+ |...+++++. +.|+|||++++...
T Consensus 186 -~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 186 -FK-EKFASIEMILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp -GG-GGTTTCCEEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred -cc-cccCCCCEEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 33 579 999996 222 322 2237899999 99999999998543
No 186
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.51 E-value=8.8e-14 Score=131.98 Aligned_cols=113 Identities=19% Similarity=0.291 Sum_probs=93.4
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (304)
+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+++ +++.|+++++..+ ...++.++.+|+.+++++
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~-~~~V~gvD~s~-~l~~A~~~~~~~g--l~~~v~~~~~d~~~~~~~- 222 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSNN--LTDRIVVIPGKVEEVSLP- 222 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTT-CSEEEEEECHH-HHHHHHHHHHHTT--CTTTEEEEESCTTTCCCS-
T ss_pred HHHHHhhhhcCCCEEEEecCcccHHHHHHHHcC-CCEEEEEEcHH-HHHHHHHHHHHcC--CCCcEEEEECchhhCccC-
Confidence 334444555567899999999999999998864 46999999998 9999999998877 457899999999987765
Q ss_pred CccceEEecchhccCCCH--HHHHHHHHHhcccCcEEEEE
Q 021975 236 GFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGT 273 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~lvi~ 273 (304)
++||+|++..+++|+.+. ...+.++.++|||||++++.
T Consensus 223 ~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 223 EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 589999999888887654 46778889999999999853
No 187
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.51 E-value=6.8e-14 Score=119.76 Aligned_cols=113 Identities=24% Similarity=0.376 Sum_probs=89.2
Q ss_pred HHHHhh--cccCCCeEEEEcCCccHHHHHHHHhCC------CCeEEEEeCCHHHHHHHHHHHHhcCc--cCCCCeEEEEc
Q 021975 157 MAQEYF--KSAQGGLLVDVSCGSGLFSRKFAKSGT------YSGVVALDFSENMLRQCYDFIKQDNT--ILTSNLALVRA 226 (304)
Q Consensus 157 ~l~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~~~------~~~v~giD~s~~~~~~a~~~~~~~~~--~~~~~i~~~~~ 226 (304)
.+.+.+ ...++.+|||||||+|.++..+++... ..+|+++|+++.+++.++++++..+. ....++.++.+
T Consensus 73 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 152 (227)
T 1r18_A 73 FALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG 152 (227)
T ss_dssp HHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES
T ss_pred HHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEEC
Confidence 344444 245678999999999999999988532 24999999999999999998876420 00257999999
Q ss_pred cCCCCCCCC-CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 227 DVCRLPFAS-GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 227 d~~~lp~~~-~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
|+.. ++++ ++||+|++..+++|+. +++.+.|||||++++....
T Consensus 153 d~~~-~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 153 DGRK-GYPPNAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp CGGG-CCGGGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred Cccc-CCCcCCCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEec
Confidence 9876 4444 7899999999999875 7889999999999998754
No 188
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.51 E-value=1.8e-13 Score=116.96 Aligned_cols=104 Identities=16% Similarity=0.223 Sum_probs=83.8
Q ss_pred ccCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC---CCCCccc
Q 021975 164 SAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---FASGFVD 239 (304)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---~~~~~fD 239 (304)
..++.+|||+|||+|.++..+++. ++..+|+|+|+++.+++.++++.+.. .++.++.+|+.... ...++||
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~~~~D 145 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-----RNIVPILGDATKPEEYRALVPKVD 145 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-----TTEEEEECCTTCGGGGTTTCCCEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-----CCCEEEEccCCCcchhhcccCCce
Confidence 456789999999999999999987 55569999999999999998877643 57999999998732 1235899
Q ss_pred eEEecchhccCCCHH-HHHHHHHHhcccCcEEEEEEe
Q 021975 240 AVHAGAALHCWPSPS-NAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 240 ~V~~~~vl~h~~d~~-~~l~~~~r~LkpgG~lvi~~~ 275 (304)
+|++... .++.. .+++++.++|||||++++...
T Consensus 146 ~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~ 179 (227)
T 1g8a_A 146 VIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIAVK 179 (227)
T ss_dssp EEEECCC---STTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 9998654 23343 459999999999999999843
No 189
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.51 E-value=1.5e-13 Score=126.09 Aligned_cols=103 Identities=22% Similarity=0.368 Sum_probs=89.6
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEe-
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA- 243 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~- 243 (304)
.++++|||||||+|.++..+++.|. .+|+|+|.|+ +++.|++.++.++ ...+|.++.++++++.++ ++||+|++
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA-~~V~ave~s~-~~~~a~~~~~~n~--~~~~i~~i~~~~~~~~lp-e~~DvivsE 156 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGA-RRVYAVEASA-IWQQAREVVRFNG--LEDRVHVLPGPVETVELP-EQVDAIVSE 156 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTC-SEEEEEECST-THHHHHHHHHHTT--CTTTEEEEESCTTTCCCS-SCEEEEECC
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCC-CEEEEEeChH-HHHHHHHHHHHcC--CCceEEEEeeeeeeecCC-ccccEEEee
Confidence 4688999999999999988888874 5899999996 8899999999988 568899999999998876 68999998
Q ss_pred --cchhccCCCHHHHHHHHHHhcccCcEEEE
Q 021975 244 --GAALHCWPSPSNAVAEISRILRSGGVFVG 272 (304)
Q Consensus 244 --~~vl~h~~d~~~~l~~~~r~LkpgG~lvi 272 (304)
...|.+-.....++....++|||||.++-
T Consensus 157 ~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 157 WMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cccccccccchhhhHHHHHHhhCCCCceECC
Confidence 45566667788999999999999998774
No 190
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.50 E-value=7.4e-14 Score=120.52 Aligned_cols=120 Identities=19% Similarity=0.230 Sum_probs=95.4
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC
Q 021975 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (304)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (304)
....+.+...+...++.+|||||||+|..+..+++..+ ..+++++|+++.+++.|+++++..+ ...++.++.+|+.+
T Consensus 46 ~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~v~~~~~d~~~ 123 (239)
T 2hnk_A 46 PEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG--LENKIFLKLGSALE 123 (239)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEESCHHH
T ss_pred HHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCCEEEEECCHHH
Confidence 34455566666556788999999999999999999854 5699999999999999999998776 33469999999754
Q ss_pred C-C--------------CCC--CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 231 L-P--------------FAS--GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 231 l-p--------------~~~--~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
. + |++ ++||+|++....+ +...+++++.++|||||++++.+..
T Consensus 124 ~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 124 TLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKE---NYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp HHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGG---GHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred HHHHHHhhcccccccccccCCCCCcCEEEEeCCHH---HHHHHHHHHHHHcCCCeEEEEEccc
Confidence 2 2 222 7899999986544 4568899999999999999987643
No 191
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.49 E-value=6.3e-14 Score=122.33 Aligned_cols=103 Identities=18% Similarity=0.223 Sum_probs=87.8
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEec
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (304)
.++.+|||+|||+|.++..+++.++ +|+|+|+++.+++.++++.+.++. . +.++.+|+.+. +++++||+|+++
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~---~-v~~~~~d~~~~-~~~~~fD~Vv~n 191 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGV---R-PRFLEGSLEAA-LPFGPFDLLVAN 191 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTC---C-CEEEESCHHHH-GGGCCEEEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCC---c-EEEEECChhhc-CcCCCCCEEEEC
Confidence 4578999999999999999999886 999999999999999999988762 2 89999988662 446789999998
Q ss_pred chhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 245 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 245 ~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
...++ ...++.++.++|||||++++.....
T Consensus 192 ~~~~~---~~~~l~~~~~~LkpgG~lils~~~~ 221 (254)
T 2nxc_A 192 LYAEL---HAALAPRYREALVPGGRALLTGILK 221 (254)
T ss_dssp CCHHH---HHHHHHHHHHHEEEEEEEEEEEEEG
T ss_pred CcHHH---HHHHHHHHHHHcCCCCEEEEEeecc
Confidence 76554 4678999999999999999987654
No 192
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.49 E-value=4.7e-13 Score=114.94 Aligned_cols=114 Identities=14% Similarity=0.095 Sum_probs=84.3
Q ss_pred HHHHHHHhhc---ccCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCC
Q 021975 154 EFKMAQEYFK---SAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (304)
Q Consensus 154 ~~~~l~~~l~---~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~ 229 (304)
....+...+. ..++.+|||+|||+|.++..+++. ++.++|+|+|+++.+++...+..+.. .++.++.+|+.
T Consensus 61 la~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-----~nv~~i~~Da~ 135 (232)
T 3id6_C 61 LAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-----PNIFPLLADAR 135 (232)
T ss_dssp HHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-----TTEEEEECCTT
T ss_pred HHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-----CCeEEEEcccc
Confidence 3344444443 567899999999999999999886 56779999999999876554443322 57999999997
Q ss_pred CCC---CCCCccceEEecchhccCCCHHHHH-HHHHHhcccCcEEEEEEe
Q 021975 230 RLP---FASGFVDAVHAGAALHCWPSPSNAV-AEISRILRSGGVFVGTTF 275 (304)
Q Consensus 230 ~lp---~~~~~fD~V~~~~vl~h~~d~~~~l-~~~~r~LkpgG~lvi~~~ 275 (304)
... ...++||+|++.... ++....+ ..+.+.|||||+|++...
T Consensus 136 ~~~~~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 136 FPQSYKSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp CGGGTTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cchhhhccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 642 124689999997643 5555554 455669999999999854
No 193
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.49 E-value=9e-14 Score=119.63 Aligned_cols=119 Identities=13% Similarity=0.090 Sum_probs=93.4
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC--
Q 021975 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-- 230 (304)
Q Consensus 154 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-- 230 (304)
....+.......++.+|||||||+|..+..+++..+ ..+++++|+++.+++.|+++++..+ ...++.++.+|+.+
T Consensus 60 ~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~~~~i~~~~~d~~~~l 137 (232)
T 3cbg_A 60 QAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG--VAEKISLRLGPALATL 137 (232)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEESCHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHHHH
Confidence 334444444445678999999999999999998754 5699999999999999999998776 34579999999743
Q ss_pred --CCCCC--CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 231 --LPFAS--GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 231 --lp~~~--~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++..+ ++||+|++.... .+...+++++.++|||||++++.....
T Consensus 138 ~~l~~~~~~~~fD~V~~d~~~---~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 138 EQLTQGKPLPEFDLIFIDADK---RNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp HHHHTSSSCCCEEEEEECSCG---GGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred HHHHhcCCCCCcCEEEECCCH---HHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 22323 789999987652 356788999999999999999876543
No 194
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.49 E-value=3.6e-14 Score=126.02 Aligned_cols=114 Identities=17% Similarity=0.222 Sum_probs=89.2
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC
Q 021975 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (304)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (304)
....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.+++++...+ ...++.++.+|+.++
T Consensus 14 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~--~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 14 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAK--KVVACELDPRLVAELHKRVQGTP--VASKLQVLVGDVLKT 89 (285)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSS--EEEEEESCHHHHHHHHHHHTTST--TGGGEEEEESCTTTS
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCC--EEEEEECCHHHHHHHHHHHHhcC--CCCceEEEEcceecc
Confidence 44556677777777788999999999999999999976 99999999999999999886654 235799999999887
Q ss_pred CCCCCccceEEec-----------chhccCCCHHHHH----HHH--HHhcccCcEEE
Q 021975 232 PFASGFVDAVHAG-----------AALHCWPSPSNAV----AEI--SRILRSGGVFV 271 (304)
Q Consensus 232 p~~~~~fD~V~~~-----------~vl~h~~d~~~~l----~~~--~r~LkpgG~lv 271 (304)
+++ +||+|+++ .+++|.++...++ +|+ +++|||||.++
T Consensus 90 ~~~--~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 90 DLP--FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CCC--CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred cch--hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 765 79999995 4566655543211 333 46999999764
No 195
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.49 E-value=5.8e-14 Score=127.23 Aligned_cols=119 Identities=10% Similarity=0.044 Sum_probs=92.8
Q ss_pred HHHHHHhhc-ccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCC-CeEEEEccCCCCC
Q 021975 155 FKMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTS-NLALVRADVCRLP 232 (304)
Q Consensus 155 ~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~-~i~~~~~d~~~lp 232 (304)
.+.+.+.+. ..++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.|+++++.+++ .. ++.++++|+.++.
T Consensus 141 ~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~~n~~~~gl--~~~~v~~i~~D~~~~l 216 (332)
T 2igt_A 141 WEWLKNAVETADRPLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAKENQVLAGL--EQAPIRWICEDAMKFI 216 (332)
T ss_dssp HHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHTC--TTSCEEEECSCHHHHH
T ss_pred HHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCC--CccceEEEECcHHHHH
Confidence 344555554 34567999999999999999999876 999999999999999999988772 23 5999999987643
Q ss_pred C----CCCccceEEecc----------hhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 233 F----ASGFVDAVHAGA----------ALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 233 ~----~~~~fD~V~~~~----------vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
. ..++||+|++.- ++++..+...+++++.++|||||+|++.....
T Consensus 217 ~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 217 QREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp HHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred HHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 1 146899999942 22334456789999999999999988777655
No 196
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.48 E-value=8.6e-14 Score=127.36 Aligned_cols=100 Identities=18% Similarity=0.183 Sum_probs=87.9
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEecc
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 245 (304)
+..+|||||||+|.++..+++.++..+++++|+ +.+++.+++ ..++.++.+|+.+ +++ .||+|++.+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~~--~~D~v~~~~ 259 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG---------NENLNFVGGDMFK-SIP--SADAVLLKW 259 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC---------CSSEEEEECCTTT-CCC--CCSEEEEES
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc---------CCCcEEEeCccCC-CCC--CceEEEEcc
Confidence 467999999999999999999988889999999 788876654 2469999999987 665 499999999
Q ss_pred hhccCCCHH--HHHHHHHHhccc---CcEEEEEEeCCC
Q 021975 246 ALHCWPSPS--NAVAEISRILRS---GGVFVGTTFLRY 278 (304)
Q Consensus 246 vl~h~~d~~--~~l~~~~r~Lkp---gG~lvi~~~~~~ 278 (304)
+|||++++. .+|+++.++||| ||+|++.++...
T Consensus 260 vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 297 (358)
T 1zg3_A 260 VLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISID 297 (358)
T ss_dssp CGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEEC
T ss_pred cccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccC
Confidence 999999988 999999999999 999999887653
No 197
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.48 E-value=2.7e-13 Score=127.83 Aligned_cols=120 Identities=18% Similarity=0.262 Sum_probs=99.2
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC--
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-- 232 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-- 232 (304)
..+...+...++.+|||+|||+|..+..++...++ .+++++|+++.+++.++++++..+ ..++.++++|+..++
T Consensus 249 ~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g---~~~v~~~~~D~~~~~~~ 325 (450)
T 2yxl_A 249 AVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMG---IKIVKPLVKDARKAPEI 325 (450)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTT---CCSEEEECSCTTCCSSS
T ss_pred HHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcC---CCcEEEEEcChhhcchh
Confidence 34455566777889999999999999999987544 699999999999999999998876 257999999998876
Q ss_pred CCCCccceEEe------cchhccCCCH----------------HHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 233 FASGFVDAVHA------GAALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 233 ~~~~~fD~V~~------~~vl~h~~d~----------------~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
+++++||+|++ ..++++.++. ..+++++.++|||||+|++++..-.
T Consensus 326 ~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 326 IGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp SCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred hccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 55578999996 4566666654 5689999999999999999887654
No 198
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.48 E-value=1.3e-13 Score=117.91 Aligned_cols=119 Identities=15% Similarity=0.117 Sum_probs=94.2
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC
Q 021975 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (304)
Q Consensus 153 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (304)
...+.+.......++.+|||||||+|.++..+++..+ ..+++++|+++.+++.|+++++..+ ...++.++.+|+.+.
T Consensus 56 ~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~i~~~~~d~~~~ 133 (229)
T 2avd_A 56 EQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAE--AEHKIDLRLKPALET 133 (229)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTT--CTTTEEEEESCHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC--CCCeEEEEEcCHHHH
Confidence 3444555555555678999999999999999998754 5699999999999999999998876 346899999998543
Q ss_pred -C-CCC----CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 232 -P-FAS----GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 232 -p-~~~----~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+ +.. ++||+|++... ..+...+++++.++|||||++++....
T Consensus 134 ~~~~~~~~~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 134 LDELLAAGEAGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp HHHHHHTTCTTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred HHHHHhcCCCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 1 111 68999999654 345678999999999999999987654
No 199
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.46 E-value=1.1e-13 Score=123.85 Aligned_cols=112 Identities=14% Similarity=0.152 Sum_probs=86.1
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc-CccCCCCeEEEEccCCCCCC--CCCccceE
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD-NTILTSNLALVRADVCRLPF--ASGFVDAV 241 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-~~~~~~~i~~~~~d~~~lp~--~~~~fD~V 241 (304)
.++.+|||||||+|.++..+++..+..+++++|+++.+++.+++++... ......++.++.+|+...+. .+++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 3567999999999999999998765679999999999999999987421 00024689999999876543 36789999
Q ss_pred EecchhccCCCH----HHHHHHHHHhcccCcEEEEEEeC
Q 021975 242 HAGAALHCWPSP----SNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 242 ~~~~vl~h~~d~----~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
++....++.+.. ..+++++.++|||||++++....
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 997665544333 57899999999999999997643
No 200
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.45 E-value=2.5e-13 Score=127.33 Aligned_cols=121 Identities=18% Similarity=0.223 Sum_probs=99.7
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-
Q 021975 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP- 232 (304)
Q Consensus 154 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp- 232 (304)
....+...+...++.+|||+|||+|..+..+++.+++.+++|+|+++.+++.++++++..+ .++.++++|+..++
T Consensus 234 ~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g----~~~~~~~~D~~~~~~ 309 (429)
T 1sqg_A 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG----MKATVKQGDGRYPSQ 309 (429)
T ss_dssp HHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTT----CCCEEEECCTTCTHH
T ss_pred HHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcC----CCeEEEeCchhhchh
Confidence 3344555667777889999999999999999998766799999999999999999998876 35789999998876
Q ss_pred -CCCCccceEEe------cchhccCCCH----------------HHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 233 -FASGFVDAVHA------GAALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 233 -~~~~~fD~V~~------~~vl~h~~d~----------------~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
+++++||+|++ ..++++.++. ..+++++.++|||||++++++..-.
T Consensus 310 ~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 310 WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp HHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred hcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 55678999996 3456666654 3779999999999999999986543
No 201
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.45 E-value=4.8e-13 Score=114.38 Aligned_cols=118 Identities=13% Similarity=0.076 Sum_probs=94.7
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC
Q 021975 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (304)
Q Consensus 154 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 233 (304)
..+.+.+++.. +.+|||||||+|.++..+++.++..+|+++|+++.+++.|+++++.++ ...++.+..+|..+...
T Consensus 11 RL~~i~~~v~~--g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~g--l~~~I~~~~gD~l~~~~ 86 (230)
T 3lec_A 11 RLQKVANYVPK--GARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHG--LTSKIDVRLANGLSAFE 86 (230)
T ss_dssp HHHHHHTTSCT--TEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTT--CTTTEEEEECSGGGGCC
T ss_pred HHHHHHHhCCC--CCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECchhhccc
Confidence 34456666554 679999999999999999999877789999999999999999999988 45789999999987654
Q ss_pred CCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++..||+|+..++.-. -...++.+....|+++|+|++.....
T Consensus 87 ~~~~~D~IviaGmGg~--lI~~IL~~~~~~l~~~~~lIlqp~~~ 128 (230)
T 3lec_A 87 EADNIDTITICGMGGR--LIADILNNDIDKLQHVKTLVLQPNNR 128 (230)
T ss_dssp GGGCCCEEEEEEECHH--HHHHHHHHTGGGGTTCCEEEEEESSC
T ss_pred cccccCEEEEeCCchH--HHHHHHHHHHHHhCcCCEEEEECCCC
Confidence 4447999886544221 13457888888999999999888644
No 202
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.44 E-value=5e-14 Score=115.68 Aligned_cols=91 Identities=16% Similarity=0.169 Sum_probs=79.5
Q ss_pred cccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC---CCCccc
Q 021975 163 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF---ASGFVD 239 (304)
Q Consensus 163 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~---~~~~fD 239 (304)
...++.+|||+|||. +++|+|+.|++.|+++.. .++.++++|+.++++ ++++||
T Consensus 9 g~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~-------~~~~~~~~d~~~~~~~~~~~~~fD 65 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTG-------NEGRVSVENIKQLLQSAHKESSFD 65 (176)
T ss_dssp TCCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTT-------TTSEEEEEEGGGGGGGCCCSSCEE
T ss_pred CCCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcc-------cCcEEEEechhcCccccCCCCCEe
Confidence 445688999999986 239999999999998742 348999999999887 788999
Q ss_pred eEEecchhccC-CCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 240 AVHAGAALHCW-PSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 240 ~V~~~~vl~h~-~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+|++..++||+ +++..++++++++|||||+|++..+.
T Consensus 66 ~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 103 (176)
T 2ld4_A 66 IILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPV 103 (176)
T ss_dssp EEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEccc
Confidence 99999999999 99999999999999999999997653
No 203
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.44 E-value=6.9e-14 Score=128.09 Aligned_cols=110 Identities=16% Similarity=0.163 Sum_probs=85.4
Q ss_pred HHHHHHHhhcccCCCeEEEEcCC------ccHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEc
Q 021975 154 EFKMAQEYFKSAQGGLLVDVSCG------SGLFSRKFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA 226 (304)
Q Consensus 154 ~~~~l~~~l~~~~~~~vLDiGcG------~G~~~~~l~~-~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~ 226 (304)
..+.+...+.. ++.+||||||| +|..+..+.+ .++..+|+|+|+|+.|. . ...++.++++
T Consensus 205 ~Ye~lL~~l~~-~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~----~~~rI~fv~G 271 (419)
T 3sso_A 205 HYDRHFRDYRN-QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V----DELRIRTIQG 271 (419)
T ss_dssp HHHHHHGGGTT-SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G----CBTTEEEEEC
T ss_pred HHHHHHHhhcC-CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h----cCCCcEEEEe
Confidence 33344433332 46799999999 6555555554 45778999999999872 1 2378999999
Q ss_pred cCCCCCCC------CCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 227 DVCRLPFA------SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 227 d~~~lp~~------~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
|+.++++. +++||+|++.. .+++.++..+|+++.++|||||++++.+...
T Consensus 272 Da~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~t 327 (419)
T 3sso_A 272 DQNDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMWT 327 (419)
T ss_dssp CTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGGG
T ss_pred cccccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEeccc
Confidence 99998876 68999999875 4667788899999999999999999988763
No 204
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.44 E-value=2.7e-13 Score=117.09 Aligned_cols=118 Identities=15% Similarity=0.182 Sum_probs=93.2
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC-
Q 021975 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL- 231 (304)
Q Consensus 154 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l- 231 (304)
....+.......++.+|||||||+|..+..+++..+ +.+++++|+++.+++.|+++++..+ ...++.++.+|+.+.
T Consensus 58 ~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~~~~i~~~~gda~~~l 135 (237)
T 3c3y_A 58 AGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG--VEHKINFIESDAMLAL 135 (237)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEESCHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHHHH
Confidence 334444444445678999999999999999998854 6799999999999999999998877 345799999998653
Q ss_pred C-C-----CCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 232 P-F-----ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 232 p-~-----~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+ + +.++||+|++.... .+...+++++.++|||||++++....
T Consensus 136 ~~l~~~~~~~~~fD~I~~d~~~---~~~~~~l~~~~~~L~pGG~lv~d~~~ 183 (237)
T 3c3y_A 136 DNLLQGQESEGSYDFGFVDADK---PNYIKYHERLMKLVKVGGIVAYDNTL 183 (237)
T ss_dssp HHHHHSTTCTTCEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECTT
T ss_pred HHHHhccCCCCCcCEEEECCch---HHHHHHHHHHHHhcCCCeEEEEecCC
Confidence 2 2 25789999986532 34578899999999999999886543
No 205
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.44 E-value=2.7e-13 Score=120.04 Aligned_cols=107 Identities=17% Similarity=0.223 Sum_probs=78.0
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEE-EccCCCCC--
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV-RADVCRLP-- 232 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~-~~d~~~lp-- 232 (304)
..+..+....++.+|||||||+|.++..+++.+ ..+|+|+|+++.|++.+.+. ..++... ..++..++
T Consensus 75 ~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~g-a~~V~aVDvs~~mL~~a~r~--------~~rv~~~~~~ni~~l~~~ 145 (291)
T 3hp7_A 75 KALAVFNLSVEDMITIDIGASTGGFTDVMLQNG-AKLVYAVDVGTNQLVWKLRQ--------DDRVRSMEQYNFRYAEPV 145 (291)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSSSCSCHHHHT--------CTTEEEECSCCGGGCCGG
T ss_pred HHHHhcCCCccccEEEecCCCccHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh--------CcccceecccCceecchh
Confidence 334433333457799999999999999998885 35999999999999886541 2344332 23433332
Q ss_pred -CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEE
Q 021975 233 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 233 -~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
++..+||+|++..+++++ ..+|.++.++|||||.+++..
T Consensus 146 ~l~~~~fD~v~~d~sf~sl---~~vL~e~~rvLkpGG~lv~lv 185 (291)
T 3hp7_A 146 DFTEGLPSFASIDVSFISL---NLILPALAKILVDGGQVVALV 185 (291)
T ss_dssp GCTTCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEE
T ss_pred hCCCCCCCEEEEEeeHhhH---HHHHHHHHHHcCcCCEEEEEE
Confidence 334569999998877654 778999999999999999874
No 206
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.43 E-value=5.5e-13 Score=114.93 Aligned_cols=117 Identities=9% Similarity=0.068 Sum_probs=93.4
Q ss_pred HHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCC
Q 021975 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (304)
Q Consensus 155 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 234 (304)
.+.+.+++.. +.+|||||||+|.++..+++.++..+|+++|+++.+++.|+++++.++ ...++.+..+|..+...+
T Consensus 12 L~~i~~~v~~--g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g--l~~~I~v~~gD~l~~~~~ 87 (244)
T 3gnl_A 12 LEKVASYITK--NERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSG--LTEQIDVRKGNGLAVIEK 87 (244)
T ss_dssp HHHHHTTCCS--SEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT--CTTTEEEEECSGGGGCCG
T ss_pred HHHHHHhCCC--CCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCceEEEEecchhhccCc
Confidence 4456666654 679999999999999999999876789999999999999999999988 456799999999775544
Q ss_pred CCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+..||+|+...+.-. -...++.+....|+++|+|++.....
T Consensus 88 ~~~~D~IviagmGg~--lI~~IL~~~~~~L~~~~~lIlq~~~~ 128 (244)
T 3gnl_A 88 KDAIDTIVIAGMGGT--LIRTILEEGAAKLAGVTKLILQPNIA 128 (244)
T ss_dssp GGCCCEEEEEEECHH--HHHHHHHHTGGGGTTCCEEEEEESSC
T ss_pred cccccEEEEeCCchH--HHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 346999886543221 13457888899999999999988644
No 207
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.43 E-value=6.6e-13 Score=118.83 Aligned_cols=107 Identities=14% Similarity=0.169 Sum_probs=86.0
Q ss_pred CCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC--CCCCCccceEEec
Q 021975 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVHAG 244 (304)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p~~~~~fD~V~~~ 244 (304)
..+|||||||+|.++..+++..+..+++++|+++.+++.|++++... ...+++++.+|+... .+++++||+|++.
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~---~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D 166 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP---RAPRVKIRVDDARMVAESFTPASRDVIIRD 166 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC---CTTTEEEEESCHHHHHHTCCTTCEEEEEEC
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc---CCCceEEEECcHHHHHhhccCCCCCEEEEC
Confidence 34999999999999999999766779999999999999999987643 246899999998654 2446789999986
Q ss_pred chhccC-C---CHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 245 AALHCW-P---SPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 245 ~vl~h~-~---d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
...+.. + ....++++++++|||||+|++....
T Consensus 167 ~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 167 VFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp CSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 432221 1 1257899999999999999988764
No 208
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.43 E-value=2.5e-13 Score=118.15 Aligned_cols=105 Identities=14% Similarity=0.135 Sum_probs=74.5
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC---CCCC---Cccc
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL---PFAS---GFVD 239 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l---p~~~---~~fD 239 (304)
++.+|||+|||+|.++..++...+..+|+|+|+++.+++.|+++++..+ ...++.++++|+.+. +++. ++||
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNN--LSDLIKVVKVPQKTLLMDALKEESEIIYD 142 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTTCSSTTTSTTCCSCCBS
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcC--CCccEEEEEcchhhhhhhhhhcccCCccc
Confidence 4679999999999999988887545699999999999999999998876 345699999997652 4442 6899
Q ss_pred eEEecchhccCC--------------CH-HHHHHHHHHhcccCcEEEE
Q 021975 240 AVHAGAALHCWP--------------SP-SNAVAEISRILRSGGVFVG 272 (304)
Q Consensus 240 ~V~~~~vl~h~~--------------d~-~~~l~~~~r~LkpgG~lvi 272 (304)
+|++...+++.. .+ ..++.++.++|||||.+.+
T Consensus 143 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 143 FCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp EEEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred EEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 999985444332 01 1345556666666665443
No 209
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.43 E-value=4.5e-13 Score=119.34 Aligned_cols=110 Identities=16% Similarity=0.268 Sum_probs=84.0
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCc--cCCCCeEEEEccCCCC-CCCCCccceEE
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNT--ILTSNLALVRADVCRL-PFASGFVDAVH 242 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~--~~~~~i~~~~~d~~~l-p~~~~~fD~V~ 242 (304)
++.+|||||||+|..+..+++..+..+|+++|+++.+++.|++++...+. ...++++++.+|+... ...+++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 46799999999999999999986567999999999999999998865310 0236899999998764 33467899999
Q ss_pred ecchhccCCCH----HHHHHHHHHhcccCcEEEEEEe
Q 021975 243 AGAALHCWPSP----SNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 243 ~~~vl~h~~d~----~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
+.......+.. ..+++++.++|||||++++...
T Consensus 163 ~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp ECC----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 96543222221 5789999999999999999763
No 210
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.43 E-value=4.3e-13 Score=111.69 Aligned_cols=100 Identities=17% Similarity=0.186 Sum_probs=77.1
Q ss_pred ccCCCeEEEEcCCccHHHHHHHHhCCC---------CeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEE-EccCCCCC-
Q 021975 164 SAQGGLLVDVSCGSGLFSRKFAKSGTY---------SGVVALDFSENMLRQCYDFIKQDNTILTSNLALV-RADVCRLP- 232 (304)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~---------~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~-~~d~~~lp- 232 (304)
..++.+|||+|||+|.++..+++..+. .+|+|+|+++.. ...++.++ .+|+...+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------------~~~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------------PLEGATFLCPADVTDPRT 85 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------------CCTTCEEECSCCTTSHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------------cCCCCeEEEeccCCCHHH
Confidence 346789999999999999999998432 699999999831 12568888 88987643
Q ss_pred -------CCCCccceEEecchhcc----CCCH-------HHHHHHHHHhcccCcEEEEEEeCC
Q 021975 233 -------FASGFVDAVHAGAALHC----WPSP-------SNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 233 -------~~~~~fD~V~~~~vl~h----~~d~-------~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+++++||+|++...++. ..+. ..+++++.++|||||+|++.++..
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 33568999999654443 2333 478999999999999999988754
No 211
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.42 E-value=6.9e-13 Score=113.18 Aligned_cols=114 Identities=11% Similarity=0.110 Sum_probs=90.5
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC-CCCC
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPFA 234 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp~~ 234 (304)
+.+.+++.. +.+|||||||+|.++..++..++..+|+++|+++.+++.|+++++.++ ...++.+..+|... ++.
T Consensus 7 ~~l~~~v~~--g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g--l~~~i~~~~~d~l~~l~~- 81 (225)
T 3kr9_A 7 ELVASFVSQ--GAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHG--LKEKIQVRLANGLAAFEE- 81 (225)
T ss_dssp HHHHTTSCT--TEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT--CTTTEEEEECSGGGGCCG-
T ss_pred HHHHHhCCC--CCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCceEEEEECchhhhccc-
Confidence 445555543 679999999999999999999877799999999999999999999998 45679999999854 332
Q ss_pred CCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
...||+|+....--. -...++.+....|+++|+|++....
T Consensus 82 ~~~~D~IviaG~Gg~--~i~~Il~~~~~~L~~~~~lVlq~~~ 121 (225)
T 3kr9_A 82 TDQVSVITIAGMGGR--LIARILEEGLGKLANVERLILQPNN 121 (225)
T ss_dssp GGCCCEEEEEEECHH--HHHHHHHHTGGGCTTCCEEEEEESS
T ss_pred CcCCCEEEEcCCChH--HHHHHHHHHHHHhCCCCEEEEECCC
Confidence 226998887543221 1356788999999999999987653
No 212
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.42 E-value=1.9e-12 Score=119.11 Aligned_cols=105 Identities=13% Similarity=0.029 Sum_probs=87.4
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC-CCC-CCCccceEEe
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPF-ASGFVDAVHA 243 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp~-~~~~fD~V~~ 243 (304)
++.+|||+| |+|.++..++..++..+|+|+|+++.+++.|+++++..++ .++.++.+|+.+ +|. .+++||+|++
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~---~~v~~~~~D~~~~l~~~~~~~fD~Vi~ 247 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY---EDIEIFTFDLRKPLPDYALHKFDTFIT 247 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC---CCEEEECCCTTSCCCTTTSSCBSEEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCEEEEEChhhhhchhhccCCccEEEE
Confidence 578999999 9999999999887667999999999999999999988772 389999999988 663 3568999999
Q ss_pred cchhccCCCHHHHHHHHHHhcccCcEE-EEEEe
Q 021975 244 GAALHCWPSPSNAVAEISRILRSGGVF-VGTTF 275 (304)
Q Consensus 244 ~~vl~h~~d~~~~l~~~~r~LkpgG~l-vi~~~ 275 (304)
...+++.. ...+++++.++|||||++ ++...
T Consensus 248 ~~p~~~~~-~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 248 DPPETLEA-IRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp CCCSSHHH-HHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred CCCCchHH-HHHHHHHHHHHcccCCeEEEEEEe
Confidence 86554332 478899999999999954 55544
No 213
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.41 E-value=5.9e-14 Score=120.86 Aligned_cols=109 Identities=17% Similarity=0.159 Sum_probs=69.6
Q ss_pred HHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEE-ccCCCCCCCC
Q 021975 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVR-ADVCRLPFAS 235 (304)
Q Consensus 157 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~-~d~~~lp~~~ 235 (304)
.+..+....++.+|||||||+|.++..+++.+ ..+|+|+|+|+.|++.++++..........++.++. .++..
T Consensus 28 ~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~----- 101 (232)
T 3opn_A 28 ALKEFHLEINGKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ----- 101 (232)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS-----
T ss_pred HHHHcCCCCCCCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc-----
Confidence 34333333456799999999999999999986 249999999999999987742211000001122222 22222
Q ss_pred CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEE
Q 021975 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
..||.+.+..++.++ ..+++++.++|||||.+++..
T Consensus 102 ~~~d~~~~D~v~~~l---~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 102 GRPSFTSIDVSFISL---DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp CCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEE
T ss_pred CCCCEEEEEEEhhhH---HHHHHHHHHhccCCCEEEEEE
Confidence 123444443333333 678999999999999999864
No 214
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.40 E-value=1.8e-12 Score=119.36 Aligned_cols=120 Identities=16% Similarity=0.128 Sum_probs=94.6
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC
Q 021975 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (304)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (304)
.+.+...+.... ..++.+|||+|||+|.++..++..+...+++|+|+++.+++.|+++++..+ ...++.++++|+.+
T Consensus 203 ~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~g--l~~~i~~~~~D~~~ 279 (373)
T 3tm4_A 203 KASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAG--VLDKIKFIQGDATQ 279 (373)
T ss_dssp CHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTT--CGGGCEEEECCGGG
T ss_pred cHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcC--CCCceEEEECChhh
Confidence 455556666665 567889999999999999999998766699999999999999999999887 34689999999999
Q ss_pred CCCCCCccceEEecchhccC-------CCH-HHHHHHHHHhcccCcEEEEEEe
Q 021975 231 LPFASGFVDAVHAGAALHCW-------PSP-SNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 231 lp~~~~~fD~V~~~~vl~h~-------~d~-~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
+++++++||+|+++..+... .+. ..+++++.++| ||.+++.+.
T Consensus 280 ~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~ 330 (373)
T 3tm4_A 280 LSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT 330 (373)
T ss_dssp GGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES
T ss_pred CCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC
Confidence 98888899999996543321 111 56788899988 555555553
No 215
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.40 E-value=1.7e-12 Score=122.93 Aligned_cols=119 Identities=18% Similarity=0.168 Sum_probs=94.8
Q ss_pred HHHhhccc--CCCeEEEEcCCccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC-
Q 021975 158 AQEYFKSA--QGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF- 233 (304)
Q Consensus 158 l~~~l~~~--~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~- 233 (304)
+...+... ++.+|||+|||+|..+..+++.. ....|+++|+++.+++.++++++..+. .++.++++|+..++.
T Consensus 107 ~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~---~nv~~~~~D~~~~~~~ 183 (479)
T 2frx_A 107 PVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI---SNVALTHFDGRVFGAA 183 (479)
T ss_dssp HHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC---CSEEEECCCSTTHHHH
T ss_pred HHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEeCCHHHhhhh
Confidence 34455555 78899999999999999999874 246999999999999999999988772 579999999988753
Q ss_pred CCCccceEEec------chhccCCC----------------HHHHHHHHHHhcccCcEEEEEEeCCCC
Q 021975 234 ASGFVDAVHAG------AALHCWPS----------------PSNAVAEISRILRSGGVFVGTTFLRYT 279 (304)
Q Consensus 234 ~~~~fD~V~~~------~vl~h~~d----------------~~~~l~~~~r~LkpgG~lvi~~~~~~~ 279 (304)
..++||+|++. .++.+.++ ...+|+++.++|||||+|+++|..-..
T Consensus 184 ~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~ 251 (479)
T 2frx_A 184 VPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQ 251 (479)
T ss_dssp STTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSS
T ss_pred ccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCc
Confidence 45789999972 34444433 236899999999999999998875533
No 216
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.39 E-value=1.1e-12 Score=109.60 Aligned_cols=107 Identities=16% Similarity=0.241 Sum_probs=79.3
Q ss_pred HHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCC
Q 021975 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (304)
Q Consensus 155 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 234 (304)
.+++..+-...++.+|||+|||+|.++..+++.+ .+|+|+|+++.. ...++.++++|+.+.+..
T Consensus 14 ~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~~--~~V~gvD~~~~~--------------~~~~v~~~~~D~~~~~~~ 77 (191)
T 3dou_A 14 EFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSLA--RKIISIDLQEME--------------EIAGVRFIRCDIFKETIF 77 (191)
T ss_dssp HHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTTC--SEEEEEESSCCC--------------CCTTCEEEECCTTSSSHH
T ss_pred HHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHcC--CcEEEEeccccc--------------cCCCeEEEEccccCHHHH
Confidence 3444444334568899999999999999999884 499999999741 236799999999886421
Q ss_pred -------C----CccceEEecchhccCC-----------CHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 235 -------S----GFVDAVHAGAALHCWP-----------SPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 235 -------~----~~fD~V~~~~vl~h~~-----------d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
. ++||+|++........ ....+++.+.++|||||.|++..+..
T Consensus 78 ~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 78 DDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp HHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred HHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 1 4899999964322111 12467889999999999999988765
No 217
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.38 E-value=9e-13 Score=118.55 Aligned_cols=110 Identities=17% Similarity=0.083 Sum_probs=86.8
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CccCCCCeEEEEccCCC-CCCCCCccceEE
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCR-LPFASGFVDAVH 242 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~-lp~~~~~fD~V~ 242 (304)
++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++... +.....+++++.+|+.. ++..+++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 467999999999999999998855669999999999999999987641 10013689999999866 333467899999
Q ss_pred ecchhcc-CCC------HHHHHHHHHHhcccCcEEEEEEe
Q 021975 243 AGAALHC-WPS------PSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 243 ~~~vl~h-~~d------~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
+....++ ... ...+++++.++|||||++++...
T Consensus 157 ~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 157 IDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 9765433 112 26889999999999999998753
No 218
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.38 E-value=3.8e-12 Score=106.51 Aligned_cols=96 Identities=14% Similarity=0.141 Sum_probs=75.1
Q ss_pred ccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEe
Q 021975 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (304)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (304)
..++.+|||+|||+|.++..+++.+ ..+++|+|+++.+++.++++. .++.++++|+.+++ ++||+|++
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~--------~~~~~~~~d~~~~~---~~~D~v~~ 116 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLG-AESVTAFDIDPDAIETAKRNC--------GGVNFMVADVSEIS---GKYDTWIM 116 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTT-BSEEEEEESCHHHHHHHHHHC--------TTSEEEECCGGGCC---CCEEEEEE
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhc--------CCCEEEECcHHHCC---CCeeEEEE
Confidence 3457899999999999999999884 347999999999999999864 26899999998865 68999999
Q ss_pred cchhccCCC--HHHHHHHHHHhcccCcEEEEEE
Q 021975 244 GAALHCWPS--PSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 244 ~~vl~h~~d--~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
...++|+.+ ...+++++.+++ |+ +++..
T Consensus 117 ~~p~~~~~~~~~~~~l~~~~~~~--g~-~~~~~ 146 (200)
T 1ne2_A 117 NPPFGSVVKHSDRAFIDKAFETS--MW-IYSIG 146 (200)
T ss_dssp CCCC-------CHHHHHHHHHHE--EE-EEEEE
T ss_pred CCCchhccCchhHHHHHHHHHhc--Cc-EEEEE
Confidence 999998864 246899999988 44 44443
No 219
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.38 E-value=1.1e-12 Score=118.83 Aligned_cols=109 Identities=17% Similarity=0.208 Sum_probs=85.4
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CccCCCCeEEEEccCCCC--CCCCCccce
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCRL--PFASGFVDA 240 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~l--p~~~~~fD~ 240 (304)
.++.+|||||||+|..+..+++..+..+|+++|+++.+++.|++++... ++ ...++.++.+|+... .+++++||+
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl-~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGY-EDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG-GSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc-CCCcEEEEECCHHHHHHhccCCCccE
Confidence 3467999999999999999998865679999999999999999987642 21 136899999998653 234578999
Q ss_pred EEecch--hccCCC--HHHHHHHHHHhcccCcEEEEEE
Q 021975 241 VHAGAA--LHCWPS--PSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 241 V~~~~v--l~h~~d--~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
|++... +++..+ ...+++++.++|||||+|++..
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 998543 111111 3678999999999999999864
No 220
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.38 E-value=5.5e-13 Score=125.42 Aligned_cols=119 Identities=17% Similarity=0.156 Sum_probs=94.7
Q ss_pred HHHHhhcccCCCeEEEEcCCccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-CC
Q 021975 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FA 234 (304)
Q Consensus 157 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~~ 234 (304)
++...+...++.+|||+|||+|..+..+++..+ .++|+++|+++.+++.++++++..+. . +.++++|+..++ +.
T Consensus 92 l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~---~-v~~~~~Da~~l~~~~ 167 (464)
T 3m6w_A 92 AVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA---P-LAVTQAPPRALAEAF 167 (464)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC---C-CEEECSCHHHHHHHH
T ss_pred HHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---e-EEEEECCHHHhhhhc
Confidence 344556667789999999999999999998743 36999999999999999999998872 3 899999987765 23
Q ss_pred CCccceEEe------cchhccCCCH----------------HHHHHHHHHhcccCcEEEEEEeCCCC
Q 021975 235 SGFVDAVHA------GAALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLRYT 279 (304)
Q Consensus 235 ~~~fD~V~~------~~vl~h~~d~----------------~~~l~~~~r~LkpgG~lvi~~~~~~~ 279 (304)
.++||+|++ ..++.+.++. ..+++++.++|||||+|+.+|..-..
T Consensus 168 ~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~ 234 (464)
T 3m6w_A 168 GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP 234 (464)
T ss_dssp CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch
Confidence 678999995 2344444433 57899999999999999998865533
No 221
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.37 E-value=3e-13 Score=118.72 Aligned_cols=104 Identities=18% Similarity=0.200 Sum_probs=77.7
Q ss_pred ccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh-cCccCCCCeEEE--EccCCCCCCCCCccce
Q 021975 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ-DNTILTSNLALV--RADVCRLPFASGFVDA 240 (304)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~-~~~~~~~~i~~~--~~d~~~lp~~~~~fD~ 240 (304)
..++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++.... .. ...++.++ ++|+..++ +++||+
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~~~--~~~~v~~~~~~~D~~~l~--~~~fD~ 143 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRITES--YGWNIVKFKSRVDIHTLP--VERTDV 143 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCCCB--TTGGGEEEECSCCTTTSC--CCCCSE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhhhc--cCCCeEEEecccCHhHCC--CCCCcE
Confidence 346789999999999999999987 3999999998 53222211000 00 01168899 99998876 679999
Q ss_pred EEecchhccCCCHH-------HHHHHHHHhcccCc--EEEEEEeC
Q 021975 241 VHAGAALHCWPSPS-------NAVAEISRILRSGG--VFVGTTFL 276 (304)
Q Consensus 241 V~~~~vl~h~~d~~-------~~l~~~~r~LkpgG--~lvi~~~~ 276 (304)
|++..+ ++..++. .+|+++.++||||| .|++.++.
T Consensus 144 V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 144 IMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 999877 6555432 37899999999999 99998775
No 222
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.37 E-value=1.1e-12 Score=117.53 Aligned_cols=111 Identities=15% Similarity=0.152 Sum_probs=85.3
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh--cCccCCCCeEEEEccCCC-CCCCCCccceE
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ--DNTILTSNLALVRADVCR-LPFASGFVDAV 241 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~i~~~~~d~~~-lp~~~~~fD~V 241 (304)
.++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++.. .++ ...+++++.+|+.+ ++..+++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~-~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGY-SSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG-GCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhccc-CCCcEEEEECcHHHHHhhCCCCceEE
Confidence 346799999999999999999886667999999999999999998765 121 13689999999865 33346789999
Q ss_pred EecchhccCC----CHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 242 HAGAALHCWP----SPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 242 ~~~~vl~h~~----d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
++....+..+ ....+++++.++|||||++++....
T Consensus 173 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 173 ITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 9865432211 1246899999999999999987643
No 223
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.37 E-value=2.5e-13 Score=119.88 Aligned_cols=104 Identities=20% Similarity=0.227 Sum_probs=77.6
Q ss_pred ccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh-cCccCCCCeEEE--EccCCCCCCCCCccce
Q 021975 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ-DNTILTSNLALV--RADVCRLPFASGFVDA 240 (304)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~-~~~~~~~~i~~~--~~d~~~lp~~~~~fD~ 240 (304)
..++.+|||+|||+|.++..+++. . +|+|+|+++ ++..+++.... .. ...++.++ ++|+..++ +++||+
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~-~--~V~gVD~s~-m~~~a~~~~~~~~~--~~~~v~~~~~~~D~~~l~--~~~fD~ 151 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ-P--NVREVKAYT-LGTSGHEKPRLVET--FGWNLITFKSKVDVTKME--PFQADT 151 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS-T--TEEEEEEEC-CCCTTSCCCCCCCC--TTGGGEEEECSCCGGGCC--CCCCSE
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc-C--CEEEEECch-hhhhhhhchhhhhh--cCCCeEEEeccCcHhhCC--CCCcCE
Confidence 346789999999999999999988 3 999999998 53333221000 00 01268899 99998876 679999
Q ss_pred EEecchhccCCCHH-------HHHHHHHHhcccCc--EEEEEEeC
Q 021975 241 VHAGAALHCWPSPS-------NAVAEISRILRSGG--VFVGTTFL 276 (304)
Q Consensus 241 V~~~~vl~h~~d~~-------~~l~~~~r~LkpgG--~lvi~~~~ 276 (304)
|++..+ ++..++. .+|+++.++||||| .|++.++.
T Consensus 152 Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 152 VLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred EEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 999877 5554432 37899999999999 99997765
No 224
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.36 E-value=3.4e-12 Score=116.19 Aligned_cols=125 Identities=12% Similarity=0.105 Sum_probs=97.9
Q ss_pred CCCcHHHHHHHHHhh----cccCCCeEEEEcCCccHHHHHHHHhCCC-----CeEEEEeCCHHHHHHHHHHHHhcCccCC
Q 021975 148 FPGPDEEFKMAQEYF----KSAQGGLLVDVSCGSGLFSRKFAKSGTY-----SGVVALDFSENMLRQCYDFIKQDNTILT 218 (304)
Q Consensus 148 ~~~~~~~~~~l~~~l----~~~~~~~vLDiGcG~G~~~~~l~~~~~~-----~~v~giD~s~~~~~~a~~~~~~~~~~~~ 218 (304)
+.++..+...+...+ ...++.+|||+|||+|.++..+++..+. .+++|+|+++.+++.|+.++...+
T Consensus 108 ~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g---- 183 (344)
T 2f8l_A 108 QMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR---- 183 (344)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT----
T ss_pred CCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC----
Confidence 566666655544433 3335679999999999999988877532 589999999999999999988776
Q ss_pred CCeEEEEccCCCCCCCCCccceEEecchhccCCCHH------------------HHHHHHHHhcccCcEEEEEEeCC
Q 021975 219 SNLALVRADVCRLPFASGFVDAVHAGAALHCWPSPS------------------NAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 219 ~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~h~~d~~------------------~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
.++.++++|.... ...+.||+|+++-.+.+++... .+++++.+.|||||++++.++..
T Consensus 184 ~~~~i~~~D~l~~-~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 184 QKMTLLHQDGLAN-LLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp CCCEEEESCTTSC-CCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred CCceEEECCCCCc-cccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 3689999998663 3457899999997776654332 57999999999999999988654
No 225
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.36 E-value=2.8e-12 Score=114.35 Aligned_cols=110 Identities=13% Similarity=0.064 Sum_probs=84.2
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh--cCccCCCCeEEEEccCCC-CCCCCCccceEE
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ--DNTILTSNLALVRADVCR-LPFASGFVDAVH 242 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~i~~~~~d~~~-lp~~~~~fD~V~ 242 (304)
++.+|||||||+|..+..+++..+..+++++|+++.+++.|++++.. .+. ...++.++.+|+.. ++..+++||+|+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~-~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGF-DDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGG-GCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccc-CCCceEEEECcHHHHHhhCCCCceEEE
Confidence 45799999999999999999885567999999999999999998754 111 13689999999755 333457899999
Q ss_pred ecchhccCC-----CHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 243 AGAALHCWP-----SPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 243 ~~~vl~h~~-----d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+...-..+. ....+++++.++|||||++++....
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 853211021 2267899999999999999997543
No 226
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.36 E-value=3.4e-12 Score=112.43 Aligned_cols=111 Identities=16% Similarity=0.203 Sum_probs=91.9
Q ss_pred HHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCC
Q 021975 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (304)
Q Consensus 157 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~ 236 (304)
.+.+.+. ++.+|||+|||+|.++..+++.+ ..+|+++|+++.+++.++++++.++ ...++.++++|+.+++. .+
T Consensus 118 ri~~~~~--~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N~--v~~~v~~~~~D~~~~~~-~~ 191 (278)
T 3k6r_A 118 RMAKVAK--PDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNK--VEDRMSAYNMDNRDFPG-EN 191 (278)
T ss_dssp HHHHHCC--TTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTT--CTTTEEEECSCTTTCCC-CS
T ss_pred HHHHhcC--CCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEeCcHHHhcc-cc
Confidence 3444443 48899999999999999999887 3589999999999999999999998 56789999999988763 57
Q ss_pred ccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 237 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
.||.|++... +....++..+.++||+||++.+.++..
T Consensus 192 ~~D~Vi~~~p----~~~~~~l~~a~~~lk~gG~ih~~~~~~ 228 (278)
T 3k6r_A 192 IADRILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp CEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCCEEEECCC----CcHHHHHHHHHHHcCCCCEEEEEeeec
Confidence 8999998642 344567889999999999998776654
No 227
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.36 E-value=1.7e-11 Score=102.89 Aligned_cols=100 Identities=14% Similarity=0.195 Sum_probs=81.7
Q ss_pred ccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEe
Q 021975 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (304)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (304)
..++.+|||+|||+|.++..+++.+. .+++|+|+++.+++.++++.+..+ .++.++++|+.+++ ++||+|++
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~---~~~D~v~~ 118 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGA-KEVICVEVDKEAVDVLIENLGEFK----GKFKVFIGDVSEFN---SRVDIVIM 118 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHTGGGT----TSEEEEESCGGGCC---CCCSEEEE
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHcC----CCEEEEECchHHcC---CCCCEEEE
Confidence 34678999999999999999998853 479999999999999999988765 27999999998864 48999999
Q ss_pred cchhccCC--CHHHHHHHHHHhcccCcEEEEE
Q 021975 244 GAALHCWP--SPSNAVAEISRILRSGGVFVGT 273 (304)
Q Consensus 244 ~~vl~h~~--d~~~~l~~~~r~LkpgG~lvi~ 273 (304)
...+++.. ....+++++.+++ ||.+++.
T Consensus 119 ~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 119 NPPFGSQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp CCCCSSSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred cCCCccccCCchHHHHHHHHHhc--CcEEEEE
Confidence 88777664 3357889999888 5544433
No 228
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.35 E-value=2.6e-12 Score=119.13 Aligned_cols=111 Identities=18% Similarity=0.205 Sum_probs=90.3
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccC-CCCeEEEEccCCCCCC----CCCccc
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTIL-TSNLALVRADVCRLPF----ASGFVD 239 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~-~~~i~~~~~d~~~lp~----~~~~fD 239 (304)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.|+++++.++ . ..++.++++|+.+... ...+||
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ng--l~~~~v~~~~~D~~~~~~~~~~~~~~fD 295 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNK--LDLSKAEFVRDDVFKLLRTYRDRGEKFD 295 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTT--CCGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECCHHHHHHHHHhcCCCCC
Confidence 357899999999999999999986 4599999999999999999998876 2 2389999999876421 146899
Q ss_pred eEEecc---------hhccCCCHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 240 AVHAGA---------ALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 240 ~V~~~~---------vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
+|++.- +.++..+...++.++.++|+|||++++.+....
T Consensus 296 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 343 (396)
T 3c0k_A 296 VIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGL 343 (396)
T ss_dssp EEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 999963 223335567889999999999999999887653
No 229
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.35 E-value=9.6e-13 Score=118.24 Aligned_cols=107 Identities=13% Similarity=0.132 Sum_probs=82.6
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CccCCCCeEEEEccCCC-CCCCCCccceEE
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCR-LPFASGFVDAVH 242 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~-lp~~~~~fD~V~ 242 (304)
++.+|||||||+|..+..+++..+..+++++|+++.+++.|++++... ++ ...++.++.+|+.. ++..+++||+|+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~-~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGF-SHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGG-GCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhcccc-CCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 457999999999999999998866679999999999999999988653 11 13689999999865 333467899999
Q ss_pred ecchhccCCCH-----HHHHHHHHHhcccCcEEEEEE
Q 021975 243 AGAALHCWPSP-----SNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 243 ~~~vl~h~~d~-----~~~l~~~~r~LkpgG~lvi~~ 274 (304)
+... +++... ..+++++.++|||||++++..
T Consensus 187 ~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 8653 332211 578999999999999999875
No 230
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.35 E-value=1.7e-12 Score=115.05 Aligned_cols=112 Identities=13% Similarity=0.146 Sum_probs=86.6
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCc-cCCCCeEEEEccCCCC-CCCCCccceEE
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNT-ILTSNLALVRADVCRL-PFASGFVDAVH 242 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~-~~~~~i~~~~~d~~~l-p~~~~~fD~V~ 242 (304)
.++.+|||||||+|..+..+++..+..+++++|+++.+++.|++++...+. ...+++.++.+|+.+. +..+++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 346799999999999999999886667999999999999999998764310 0136899999998653 22357899999
Q ss_pred ecchhccCCCH----HHHHHHHHHhcccCcEEEEEEeC
Q 021975 243 AGAALHCWPSP----SNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 243 ~~~vl~h~~d~----~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+....++.+.. ..+++++.++|||||++++....
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 95433222211 58899999999999999987543
No 231
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.34 E-value=2.6e-12 Score=113.41 Aligned_cols=110 Identities=15% Similarity=0.175 Sum_probs=86.1
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CccCCCCeEEEEccCCC-CCCCCCccceEE
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCR-LPFASGFVDAVH 242 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~-lp~~~~~fD~V~ 242 (304)
++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++... ++ ..++++++.+|+.. ++..+++||+|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~-~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKL-DDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTT-TSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcccc-CCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 467999999999999999998754569999999999999999987542 11 24689999999865 333457899999
Q ss_pred ecchhccCCC----HHHHHHHHHHhcccCcEEEEEEeC
Q 021975 243 AGAALHCWPS----PSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 243 ~~~vl~h~~d----~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+....+..+. ...+++++.++|||||++++....
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 9654322211 257899999999999999987543
No 232
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.33 E-value=2.3e-12 Score=116.23 Aligned_cols=109 Identities=13% Similarity=0.136 Sum_probs=85.3
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CccCCCCeEEEEccCCCC-CCCCCccceEE
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCRL-PFASGFVDAVH 242 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~l-p~~~~~fD~V~ 242 (304)
++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++... +. ...+++++.+|+.+. +..+++||+|+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~-~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGY-EDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGG-GSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc-CCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 467999999999999999998755679999999999999999987652 11 136899999998652 22357899999
Q ss_pred ecchhccCC---C--HHHHHHHHHHhcccCcEEEEEEeC
Q 021975 243 AGAALHCWP---S--PSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 243 ~~~vl~h~~---d--~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+... +++. . ...+++++.++|||||++++....
T Consensus 195 ~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 195 VDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 8642 2221 1 168899999999999999997643
No 233
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.33 E-value=2.3e-12 Score=119.57 Aligned_cols=110 Identities=15% Similarity=0.134 Sum_probs=89.6
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC----CCCccceE
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF----ASGFVDAV 241 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~----~~~~fD~V 241 (304)
++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.|+++++.+++ ..++.++++|+.+... ..++||+|
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g-~~~v~~vD~s~~~l~~a~~n~~~n~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V 293 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAG-ADEVIGIDKSPRAIETAKENAKLNGV--EDRMKFIVGSAFEEMEKLQKKGEKFDIV 293 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCC--CccceEEECCHHHHHHHHHhhCCCCCEE
Confidence 57899999999999999999884 35999999999999999999998872 3389999999876431 25689999
Q ss_pred Eecc---------hhccCCCHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 242 HAGA---------ALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 242 ~~~~---------vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
++.- +.++..+...++.++.++|||||++++.+....
T Consensus 294 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 294 VLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp EECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 9953 223334556789999999999999999887653
No 234
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.33 E-value=1.8e-12 Score=119.72 Aligned_cols=111 Identities=16% Similarity=0.119 Sum_probs=86.9
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCC-CeEEEEccCCCC-C-C--CCCccc
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTS-NLALVRADVCRL-P-F--ASGFVD 239 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~-~i~~~~~d~~~l-p-~--~~~~fD 239 (304)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|+++++.+++ .. ++.++++|+.+. + . ...+||
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~--~~~~v~~~~~D~~~~l~~~~~~~~~fD 287 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHL--DMANHQLVVMDVFDYFKYARRHHLTYD 287 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTC--CCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCC--CccceEEEECCHHHHHHHHHHhCCCcc
Confidence 357899999999999999999865 34899999999999999999998872 33 899999998652 2 1 245899
Q ss_pred eEEecchh-----ccCCCH----HHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 240 AVHAGAAL-----HCWPSP----SNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 240 ~V~~~~vl-----~h~~d~----~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
+|++.-.. .++.+. ..+++++.++|+|||+|++.+....
T Consensus 288 ~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 288 IIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp EEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred EEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 99985322 233333 3567888999999999999887653
No 235
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.31 E-value=1.4e-12 Score=113.17 Aligned_cols=115 Identities=9% Similarity=0.144 Sum_probs=86.4
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC
Q 021975 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (304)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (304)
.....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.++++++. ..++.++++|+.+
T Consensus 15 d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~ 87 (244)
T 1qam_A 15 SKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCN--FVTAIEIDHKLCKTTENKLVD-----HDNFQVLNKDILQ 87 (244)
T ss_dssp CHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEECSCHHHHHHHHHHTTT-----CCSEEEECCCGGG
T ss_pred CHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCC--eEEEEECCHHHHHHHHHhhcc-----CCCeEEEEChHHh
Confidence 345556677777666788999999999999999999975 999999999999999998753 2579999999999
Q ss_pred CCCCC-CccceEEe----------cchhccCCCHHHHH----HHHHHhcccCcEEEE
Q 021975 231 LPFAS-GFVDAVHA----------GAALHCWPSPSNAV----AEISRILRSGGVFVG 272 (304)
Q Consensus 231 lp~~~-~~fD~V~~----------~~vl~h~~d~~~~l----~~~~r~LkpgG~lvi 272 (304)
+++++ ..|++|.. ...++|...+..++ +.+.|+++++|.+.+
T Consensus 88 ~~~~~~~~~~vv~nlPy~~~~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G~l~v 144 (244)
T 1qam_A 88 FKFPKNQSYKIFGNIPYNISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSLAL 144 (244)
T ss_dssp CCCCSSCCCEEEEECCGGGHHHHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTSHHHH
T ss_pred CCcccCCCeEEEEeCCcccCHHHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCcchhH
Confidence 88764 45643322 23445544444445 558899999986543
No 236
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.31 E-value=6.6e-12 Score=107.23 Aligned_cols=102 Identities=14% Similarity=0.110 Sum_probs=84.1
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEec
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (304)
.++.+|||||||.|.++..+. +..+++|+|+++.+++.+++++...+ .+..+..+|....+.+ ++||+|++.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g----~~~~~~v~D~~~~~~~-~~~DvvLll 175 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKD----WDFTFALQDVLCAPPA-EAGDLALIF 175 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTT----CEEEEEECCTTTSCCC-CBCSEEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcC----CCceEEEeecccCCCC-CCcchHHHH
Confidence 457799999999999998888 45699999999999999999988765 7889999999887765 589999999
Q ss_pred chhccCCCHH-HHHHHHHHhcccCcEEEEEE
Q 021975 245 AALHCWPSPS-NAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 245 ~vl~h~~d~~-~~l~~~~r~LkpgG~lvi~~ 274 (304)
-++||+.+.. ...-++...|+++|+++-..
T Consensus 176 k~lh~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 176 KLLPLLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp SCHHHHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred HHHHHhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 8888875332 23338888999998766655
No 237
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.31 E-value=3.9e-12 Score=111.43 Aligned_cols=99 Identities=12% Similarity=0.069 Sum_probs=82.6
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CccCCCCeEEEEccCCCCCCCCCccceEEe
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCRLPFASGFVDAVHA 243 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (304)
.+.+|||||||+|..+..+.+. + .+++++|+++.+++.|++++... +. ..+++.++.+|..... ++||+|++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~-~~~rv~~~~~D~~~~~---~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVK-NNKNFTHAKQLLDLDI---KKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHH-TCTTEEEESSGGGSCC---CCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhcccc-CCCeEEEEechHHHHH---hhCCEEEE
Confidence 4579999999999999999988 5 79999999999999999876431 10 1368999999987754 78999998
Q ss_pred cchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 244 GAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 244 ~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
. ..+|..+++++.++|||||++++...
T Consensus 146 d-----~~dp~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 146 L-----QEPDIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp S-----SCCCHHHHHHHHTTEEEEEEEEEEEE
T ss_pred C-----CCChHHHHHHHHHhcCCCcEEEEEcC
Confidence 6 35778899999999999999998653
No 238
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.31 E-value=2.2e-12 Score=119.07 Aligned_cols=108 Identities=19% Similarity=0.226 Sum_probs=87.5
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC----CCCccceE
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF----ASGFVDAV 241 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~----~~~~fD~V 241 (304)
++.+|||+|||+|.++..++... .+|+|+|+++.+++.|+++++.++. .++.++++|+.+... ...+||+|
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~n~~~n~~---~~~~~~~~d~~~~~~~~~~~~~~fD~I 283 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGF--REVVAVDSSAEALRRAEENARLNGL---GNVRVLEANAFDLLRRLEKEGERFDLV 283 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHE--EEEEEEESCHHHHHHHHHHHHHTTC---TTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcCC---CCceEEECCHHHHHHHHHhcCCCeeEE
Confidence 56799999999999999999884 4999999999999999999998873 459999999876431 15689999
Q ss_pred Eecch---------hccCCCHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 242 HAGAA---------LHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 242 ~~~~v---------l~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
++.-. .++..+...++.++.++|+|||+|++.+....
T Consensus 284 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 284 VLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp EECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 98432 12223446789999999999999999987653
No 239
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.31 E-value=7.4e-12 Score=123.92 Aligned_cols=109 Identities=18% Similarity=0.235 Sum_probs=90.1
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCC-CCeEEEEccCCC-CCCCCCccceEEe
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILT-SNLALVRADVCR-LPFASGFVDAVHA 243 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~-~~i~~~~~d~~~-lp~~~~~fD~V~~ 243 (304)
++.+|||+|||+|.++..++..+. .+|+++|+|+.+++.++++++.+++ . .++.++++|+.+ ++...++||+|++
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga-~~V~aVD~s~~al~~a~~N~~~ngl--~~~~v~~i~~D~~~~l~~~~~~fD~Ii~ 615 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGA-RSTTTVDMSRTYLEWAERNLRLNGL--TGRAHRLIQADCLAWLREANEQFDLIFI 615 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHTTC--CSTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHcCC--CccceEEEecCHHHHHHhcCCCccEEEE
Confidence 578999999999999999998764 4799999999999999999998873 3 479999999876 3444678999998
Q ss_pred cc-----------hhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 244 GA-----------ALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 244 ~~-----------vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
.- ++++..+...++.++.++|||||+|++.+..+
T Consensus 616 DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 616 DPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp CCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred CCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 53 23334455678999999999999999888664
No 240
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.30 E-value=3.4e-12 Score=110.05 Aligned_cols=104 Identities=15% Similarity=0.137 Sum_probs=89.7
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEecc
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 245 (304)
+..+|||||||+|.++..++...+..+|+++|+++.+++.+++++..++ .+..+...|...-+ +.+.||+|++.-
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g----~~~~~~v~D~~~~~-p~~~~DvaL~lk 206 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLN----VPHRTNVADLLEDR-LDEPADVTLLLK 206 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTT----CCEEEEECCTTTSC-CCSCCSEEEETT
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcC----CCceEEEeeecccC-CCCCcchHHHHH
Confidence 3679999999999999999988788899999999999999999998877 55888999987655 467899999999
Q ss_pred hhccCCCHH--HHHHHHHHhcccCcEEEEEEe
Q 021975 246 ALHCWPSPS--NAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 246 vl~h~~d~~--~~l~~~~r~LkpgG~lvi~~~ 275 (304)
+++|+.+.. ..+ ++...|+++|+++-..-
T Consensus 207 ti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 207 TLPCLETQQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp CHHHHHHHSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred HHHHhhhhhhHHHH-HHHHHhCCCCEEEeccc
Confidence 999997553 344 89999999998876665
No 241
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.30 E-value=3.9e-12 Score=112.62 Aligned_cols=107 Identities=13% Similarity=0.127 Sum_probs=83.2
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--Ccc------CCCCeEEEEccCCCC-CCCC
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTI------LTSNLALVRADVCRL-PFAS 235 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~~------~~~~i~~~~~d~~~l-p~~~ 235 (304)
.++.+|||||||+|.++..+++. +..+++++|+++.+++.|++++ .. ++. ...++.++.+|+.+. +. +
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~ 150 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-N 150 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-C
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-c
Confidence 34679999999999999999988 5679999999999999999987 32 100 136899999997542 22 5
Q ss_pred CccceEEecchhccCCC-----HHHHHHHHHHhcccCcEEEEEEe
Q 021975 236 GFVDAVHAGAALHCWPS-----PSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d-----~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
++||+|++.... ++.. ...+++++.++|||||++++...
T Consensus 151 ~~fD~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 151 RGFDVIIADSTD-PVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp CCEEEEEEECCC-CC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 789999986543 2211 25789999999999999998753
No 242
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.29 E-value=1.8e-12 Score=121.78 Aligned_cols=120 Identities=16% Similarity=0.152 Sum_probs=93.5
Q ss_pred HHHHhhcccCCCeEEEEcCCccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-CC
Q 021975 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FA 234 (304)
Q Consensus 157 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~~ 234 (304)
++...+...++.+|||+|||+|..+..++... ...+|+++|+++.+++.++++++..+. .++.++.+|+..++ ..
T Consensus 96 l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~---~nv~v~~~Da~~l~~~~ 172 (456)
T 3m4x_A 96 IVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV---SNAIVTNHAPAELVPHF 172 (456)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC---SSEEEECCCHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CceEEEeCCHHHhhhhc
Confidence 34455666778999999999999999998863 246999999999999999999998873 57999999987754 23
Q ss_pred CCccceEEecc------hhccCCCH----------------HHHHHHHHHhcccCcEEEEEEeCCCC
Q 021975 235 SGFVDAVHAGA------ALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLRYT 279 (304)
Q Consensus 235 ~~~fD~V~~~~------vl~h~~d~----------------~~~l~~~~r~LkpgG~lvi~~~~~~~ 279 (304)
+++||+|++.. ++.+-++. ..+|+++.++|||||+|+.+|..-..
T Consensus 173 ~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~ 239 (456)
T 3m4x_A 173 SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP 239 (456)
T ss_dssp TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG
T ss_pred cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc
Confidence 57899999742 33322211 26799999999999999998876533
No 243
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.29 E-value=6.5e-12 Score=116.14 Aligned_cols=108 Identities=16% Similarity=0.058 Sum_probs=84.3
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-CCCCccceEEec
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FASGFVDAVHAG 244 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~~~~~fD~V~~~ 244 (304)
++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++++.++. ...+.++|+.+.. ...+.||+|++.
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga--~V~avDis~~al~~a~~n~~~ng~----~~~~~~~D~~~~l~~~~~~fD~Ii~d 287 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGA--YALAVDKDLEALGVLDQAALRLGL----RVDIRHGEALPTLRGLEGPFHHVLLD 287 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTC----CCEEEESCHHHHHHTCCCCEEEEEEC
T ss_pred CCCeEEEcccchhHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHHHhCC----CCcEEEccHHHHHHHhcCCCCEEEEC
Confidence 478999999999999999999876 699999999999999999998872 2356688886532 113349999985
Q ss_pred chhcc---------CCCHHHHHHHHHHhcccCcEEEEEEeCCCC
Q 021975 245 AALHC---------WPSPSNAVAEISRILRSGGVFVGTTFLRYT 279 (304)
Q Consensus 245 ~vl~h---------~~d~~~~l~~~~r~LkpgG~lvi~~~~~~~ 279 (304)
....+ ..+...+++.+.++|||||+|++.+.....
T Consensus 288 pP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~ 331 (393)
T 4dmg_A 288 PPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHL 331 (393)
T ss_dssp CCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS
T ss_pred CCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCC
Confidence 43211 123357899999999999999988876643
No 244
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.28 E-value=2.1e-11 Score=110.55 Aligned_cols=101 Identities=20% Similarity=0.201 Sum_probs=85.3
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEecc
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 245 (304)
++.+|||+|||+|.++.. ++. ..+|+|+|+|+.+++.++++++.++ ...++.++++|+.+.. ++||+|++..
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~--~~~V~~vD~s~~ai~~a~~n~~~n~--l~~~v~~~~~D~~~~~---~~fD~Vi~dp 266 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKN--AKKIYAIDINPHAIELLKKNIKLNK--LEHKIIPILSDVREVD---VKGNRVIMNL 266 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTT--SSEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCGGGCC---CCEEEEEECC
T ss_pred CCCEEEEccCccCHHHHh-ccC--CCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECChHHhc---CCCcEEEECC
Confidence 578999999999999999 773 4599999999999999999999887 3458999999998765 7899999963
Q ss_pred hhccCCCHHHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 246 ALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 246 vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
.- ....+++++.++|+|||++++.++...
T Consensus 267 P~----~~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 267 PK----FAHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp TT----TGGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred cH----hHHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 21 123789999999999999999887664
No 245
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.26 E-value=1.8e-11 Score=115.25 Aligned_cols=129 Identities=15% Similarity=0.134 Sum_probs=102.5
Q ss_pred CCCCcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhC-------------CCCeEEEEeCCHHHHHHHHHHHHhc
Q 021975 147 GFPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-------------TYSGVVALDFSENMLRQCYDFIKQD 213 (304)
Q Consensus 147 ~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-------------~~~~v~giD~s~~~~~~a~~~~~~~ 213 (304)
.++++....+.+.+.+.+.++.+|||+|||+|.++..+.+.. ...+++|+|+++.+++.|+.++..+
T Consensus 152 ~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~ 231 (445)
T 2okc_A 152 QYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLH 231 (445)
T ss_dssp GGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHT
T ss_pred cccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHh
Confidence 367888889999988887778899999999999998887642 1248999999999999999998877
Q ss_pred CccCCCCeEEEEccCCCCCCCCCccceEEecchhccCCC-----------------HHHHHHHHHHhcccCcEEEEEEeC
Q 021975 214 NTILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWPS-----------------PSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 214 ~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~h~~d-----------------~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+. ...++.+.++|....+.. ..||+|+++-.+.+... ...+++.+.++|||||+++++++.
T Consensus 232 g~-~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 232 GI-GTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp TC-CSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred CC-CcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 62 011678899998776643 48999999866554321 137899999999999999988865
Q ss_pred C
Q 021975 277 R 277 (304)
Q Consensus 277 ~ 277 (304)
.
T Consensus 310 ~ 310 (445)
T 2okc_A 310 N 310 (445)
T ss_dssp H
T ss_pred c
Confidence 3
No 246
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.24 E-value=1.3e-11 Score=110.26 Aligned_cols=109 Identities=17% Similarity=0.270 Sum_probs=80.8
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC
Q 021975 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (304)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (304)
....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.++++++..+ ..++.++.+|+..+
T Consensus 28 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~--~v~~vDi~~~~~~~a~~~~~~~~---~~~v~~~~~D~~~~ 102 (299)
T 2h1r_A 28 PGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAK--KVITIDIDSRMISEVKKRCLYEG---YNNLEVYEGDAIKT 102 (299)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSS--EEEEECSCHHHHHHHHHHHHHTT---CCCEEC----CCSS
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHHcC---CCceEEEECchhhC
Confidence 44556666677766788999999999999999998865 99999999999999999887654 26899999999888
Q ss_pred CCCCCccceEEecchhccCCCHH--HHH---------------HHHHHhcccCc
Q 021975 232 PFASGFVDAVHAGAALHCWPSPS--NAV---------------AEISRILRSGG 268 (304)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~--~~l---------------~~~~r~LkpgG 268 (304)
+++ +||+|+++...+ +..+. .++ +.+.|+++++|
T Consensus 103 ~~~--~~D~Vv~n~py~-~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 103 VFP--KFDVCTANIPYK-ISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp CCC--CCSEEEEECCGG-GHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred Ccc--cCCEEEEcCCcc-cccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 753 799999964433 22221 222 45678888877
No 247
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.24 E-value=6e-14 Score=121.77 Aligned_cols=114 Identities=11% Similarity=0.165 Sum_probs=88.4
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC
Q 021975 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (304)
Q Consensus 154 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 233 (304)
..+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.++++.+. ..++.++++|+.++++
T Consensus 17 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~~--~v~~id~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~~~~ 89 (245)
T 1yub_A 17 VLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISK--QVTSIELDSHLFNLSSEKLKL-----NTRVTLIHQDILQFQF 89 (245)
T ss_dssp THHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHSS--EEEESSSSCSSSSSSSCTTTT-----CSEEEECCSCCTTTTC
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhCC--eEEEEECCHHHHHHHHHHhcc-----CCceEEEECChhhcCc
Confidence 345566666666778999999999999999999874 999999999999988876541 2579999999999887
Q ss_pred CC-CccceEEec-----------chhccCCCHHHHH----HHHHHhcccCcEEEEEEe
Q 021975 234 AS-GFVDAVHAG-----------AALHCWPSPSNAV----AEISRILRSGGVFVGTTF 275 (304)
Q Consensus 234 ~~-~~fD~V~~~-----------~vl~h~~d~~~~l----~~~~r~LkpgG~lvi~~~ 275 (304)
++ ++| .|+++ .+++|..+...++ +.+.++|||||.+++...
T Consensus 90 ~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 90 PNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp CCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred ccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 64 678 55553 2344555555566 779999999998777554
No 248
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.23 E-value=9.9e-11 Score=109.77 Aligned_cols=112 Identities=16% Similarity=0.206 Sum_probs=85.5
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC---
Q 021975 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR--- 230 (304)
Q Consensus 154 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~--- 230 (304)
+.+.+.+.+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++.+.+++ .++.|+++|+.+
T Consensus 274 l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~~--~V~gvD~s~~al~~A~~n~~~~~~---~~v~f~~~d~~~~l~ 348 (433)
T 1uwv_A 274 MVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAA--SVVGVEGVPALVEKGQQNARLNGL---QNVTFYHENLEEDVT 348 (433)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSS--EEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCTTSCCS
T ss_pred HHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhCC--EEEEEeCCHHHHHHHHHHHHHcCC---CceEEEECCHHHHhh
Confidence 445555566656678999999999999999998854 999999999999999999988763 489999999977
Q ss_pred -CCCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEE
Q 021975 231 -LPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 231 -lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
+++.+++||+|++.---... ..+++.+. .++|+++++++.
T Consensus 349 ~~~~~~~~fD~Vv~dPPr~g~---~~~~~~l~-~~~p~~ivyvsc 389 (433)
T 1uwv_A 349 KQPWAKNGFDKVLLDPARAGA---AGVMQQII-KLEPIRIVYVSC 389 (433)
T ss_dssp SSGGGTTCCSEEEECCCTTCC---HHHHHHHH-HHCCSEEEEEES
T ss_pred hhhhhcCCCCEEEECCCCccH---HHHHHHHH-hcCCCeEEEEEC
Confidence 34556789999985322111 23455544 378888887765
No 249
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.23 E-value=4.3e-12 Score=113.59 Aligned_cols=103 Identities=15% Similarity=0.102 Sum_probs=74.4
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeC----CHHHHHHHHHHHHhcCccCCCCeEEEEc-cCCCCCCCCCccc
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDF----SENMLRQCYDFIKQDNTILTSNLALVRA-DVCRLPFASGFVD 239 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~----s~~~~~~a~~~~~~~~~~~~~~i~~~~~-d~~~lp~~~~~fD 239 (304)
.++.+|||+|||+|.++..+++. . +|+|+|+ ++.+++.+. .+.. ...++.++++ |+..++ ..+||
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~-~--~V~gvD~~~~~~~~~~~~~~--~~~~---~~~~v~~~~~~D~~~l~--~~~fD 150 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL-K--NVREVKGLTKGGPGHEEPIP--MSTY---GWNLVRLQSGVDVFFIP--PERCD 150 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS-T--TEEEEEEECCCSTTSCCCCC--CCST---TGGGEEEECSCCTTTSC--CCCCS
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc-C--CEEEEeccccCchhHHHHHH--hhhc---CCCCeEEEeccccccCC--cCCCC
Confidence 45789999999999999999988 3 8999999 554332110 0100 1256899999 888775 56899
Q ss_pred eEEecchhc---cCCCHH---HHHHHHHHhcccCcEEEEEEeCC
Q 021975 240 AVHAGAALH---CWPSPS---NAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 240 ~V~~~~vl~---h~~d~~---~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+|++..+++ +..+.. .+|.++.++|||||.|++..+..
T Consensus 151 ~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 151 TLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp EEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred EEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 999976643 222222 47899999999999999876644
No 250
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.20 E-value=2.3e-10 Score=106.88 Aligned_cols=100 Identities=17% Similarity=0.171 Sum_probs=79.7
Q ss_pred ccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEe
Q 021975 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (304)
Q Consensus 164 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (304)
..++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|+++.+.+++ . +.++.+|+.++.. . +||+|++
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~~--~V~gvD~s~~ai~~A~~n~~~ngl---~-v~~~~~d~~~~~~-~-~fD~Vv~ 359 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRGF--NVKGFDSNEFAIEMARRNVEINNV---D-AEFEVASDREVSV-K-GFDTVIV 359 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTC---C-EEEEECCTTTCCC-T-TCSEEEE
T ss_pred cCCCCEEEEeeccchHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCC---c-EEEEECChHHcCc-c-CCCEEEE
Confidence 34578999999999999999999865 999999999999999999988762 3 9999999988753 2 8999999
Q ss_pred cchhccCCCHHHHHHHHHHhcccCcEEEEEE
Q 021975 244 GAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 244 ~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
.-.-.. ....+++.+. .|+|||+++++.
T Consensus 360 dPPr~g--~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 360 DPPRAG--LHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp CCCTTC--SCHHHHHHHH-HHCCSEEEEEES
T ss_pred cCCccc--hHHHHHHHHH-hcCCCcEEEEEC
Confidence 543211 1134566554 599999999875
No 251
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.17 E-value=1.2e-10 Score=103.43 Aligned_cols=90 Identities=12% Similarity=0.226 Sum_probs=76.9
Q ss_pred cHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC
Q 021975 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (304)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (304)
.....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.+++++.. ..++.++++|+.+
T Consensus 35 d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~--~V~aVEid~~li~~a~~~~~~-----~~~v~vi~gD~l~ 107 (295)
T 3gru_A 35 DKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAK--KVYVIEIDKSLEPYANKLKEL-----YNNIEIIWGDALK 107 (295)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCGGGHHHHHHHHHH-----CSSEEEEESCTTT
T ss_pred CHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHhcc-----CCCeEEEECchhh
Confidence 345566777777777788999999999999999999865 999999999999999998863 2589999999999
Q ss_pred CCCCCCccceEEecchh
Q 021975 231 LPFASGFVDAVHAGAAL 247 (304)
Q Consensus 231 lp~~~~~fD~V~~~~vl 247 (304)
+++++.+||+|+++...
T Consensus 108 ~~~~~~~fD~Iv~NlPy 124 (295)
T 3gru_A 108 VDLNKLDFNKVVANLPY 124 (295)
T ss_dssp SCGGGSCCSEEEEECCG
T ss_pred CCcccCCccEEEEeCcc
Confidence 88888889999987543
No 252
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.17 E-value=6.2e-11 Score=110.37 Aligned_cols=119 Identities=18% Similarity=0.210 Sum_probs=91.3
Q ss_pred CCCCCcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEE
Q 021975 146 SGFPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224 (304)
Q Consensus 146 ~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~ 224 (304)
..+.++..+.+.+.+.+...++.+|||+|||+|.++..+++.. +..+++|+|+++.+++.| .++.++
T Consensus 19 g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------------~~~~~~ 86 (421)
T 2ih2_A 19 GRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------------PWAEGI 86 (421)
T ss_dssp --CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------------TTEEEE
T ss_pred ceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------------CCCcEE
Confidence 3456778888888888876567799999999999999999863 456999999999887655 358899
Q ss_pred EccCCCCCCCCCccceEEecchhc----------cCCCH-------------------HHHHHHHHHhcccCcEEEEEEe
Q 021975 225 RADVCRLPFASGFVDAVHAGAALH----------CWPSP-------------------SNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 225 ~~d~~~lp~~~~~fD~V~~~~vl~----------h~~d~-------------------~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
++|+...+. .++||+|+++-... |+.+. ..+++.+.++|+|||++++.++
T Consensus 87 ~~D~~~~~~-~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 87 LADFLLWEP-GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp ESCGGGCCC-SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eCChhhcCc-cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 999977643 46899999952211 12111 1568999999999999999987
Q ss_pred CC
Q 021975 276 LR 277 (304)
Q Consensus 276 ~~ 277 (304)
..
T Consensus 166 ~~ 167 (421)
T 2ih2_A 166 AT 167 (421)
T ss_dssp GG
T ss_pred hH
Confidence 65
No 253
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.16 E-value=1.6e-10 Score=106.78 Aligned_cols=126 Identities=12% Similarity=0.055 Sum_probs=95.5
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCC--------------------------------------
Q 021975 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTY-------------------------------------- 190 (304)
Q Consensus 149 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~-------------------------------------- 190 (304)
+..+.+...+.......++..|||++||+|.++..++..+.+
T Consensus 184 pl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 263 (393)
T 3k0b_A 184 PIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQP 263 (393)
T ss_dssp SCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred CCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCC
Confidence 444566666666666667789999999999999888875432
Q ss_pred CeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEecchhc-cC---CCHHHHHHHHHHhccc
Q 021975 191 SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALH-CW---PSPSNAVAEISRILRS 266 (304)
Q Consensus 191 ~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~-h~---~d~~~~l~~~~r~Lkp 266 (304)
.+++|+|+++.+++.|+++++..+ ....+.++++|+.+++.+ .+||+|+++--.. .+ .+...+.+++.+.||+
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~g--l~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~ 340 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAG--LGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKR 340 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTT--CTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhc
Confidence 469999999999999999999887 445799999999988764 5899999983321 11 1234566667777776
Q ss_pred --CcEEEEEEeCC
Q 021975 267 --GGVFVGTTFLR 277 (304)
Q Consensus 267 --gG~lvi~~~~~ 277 (304)
||.+++.+...
T Consensus 341 ~~g~~~~iit~~~ 353 (393)
T 3k0b_A 341 MPTWSVYVLTSYE 353 (393)
T ss_dssp CTTCEEEEEECCT
T ss_pred CCCCEEEEEECCH
Confidence 89988888654
No 254
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.16 E-value=1.5e-10 Score=106.88 Aligned_cols=126 Identities=14% Similarity=0.086 Sum_probs=96.7
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCC--------------------------------------
Q 021975 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTY-------------------------------------- 190 (304)
Q Consensus 149 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~-------------------------------------- 190 (304)
+..+.+...+.......++..|||++||+|.++..++..+.+
T Consensus 178 pl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 257 (385)
T 3ldu_A 178 PIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK 257 (385)
T ss_dssp CCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCC
T ss_pred CCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCC
Confidence 334556666666666667889999999999999888776422
Q ss_pred CeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEecchhc-cC---CCHHHHHHHHHHhccc
Q 021975 191 SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALH-CW---PSPSNAVAEISRILRS 266 (304)
Q Consensus 191 ~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~-h~---~d~~~~l~~~~r~Lkp 266 (304)
.+|+|+|+++.+++.|+++++.++ ....+.+.++|+.+++.+ .+||+|+++--.. .+ .+...+.+++.+.||+
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~g--l~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~ 334 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAG--VDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRK 334 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhh
Confidence 479999999999999999999887 345799999999988754 5899999965432 11 2334567777778877
Q ss_pred --CcEEEEEEeCC
Q 021975 267 --GGVFVGTTFLR 277 (304)
Q Consensus 267 --gG~lvi~~~~~ 277 (304)
||.+++.+...
T Consensus 335 ~~g~~~~iit~~~ 347 (385)
T 3ldu_A 335 LKNWSYYLITSYE 347 (385)
T ss_dssp SBSCEEEEEESCT
T ss_pred CCCCEEEEEECCH
Confidence 88888888654
No 255
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.15 E-value=3.1e-10 Score=104.50 Aligned_cols=126 Identities=13% Similarity=0.065 Sum_probs=96.8
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCC--------------------------------------
Q 021975 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTY-------------------------------------- 190 (304)
Q Consensus 149 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~-------------------------------------- 190 (304)
+..+.+...+.......++..+||.+||+|.++..++..+.+
T Consensus 177 pl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 256 (384)
T 3ldg_A 177 PIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQ 256 (384)
T ss_dssp CCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred CCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCC
Confidence 334556666666666667889999999999999888865432
Q ss_pred CeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEecchhc-cCC---CHHHHHHHHHHhccc
Q 021975 191 SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALH-CWP---SPSNAVAEISRILRS 266 (304)
Q Consensus 191 ~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~-h~~---d~~~~l~~~~r~Lkp 266 (304)
.+++|+|+++.+++.|+++++..+ ....+.++++|+.+++.+ .+||+|+++--.. .+. +...+.+++.+.||+
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~g--l~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~ 333 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVG--LEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAP 333 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhh
Confidence 469999999999999999999888 456799999999988764 4899999973321 122 334567777778877
Q ss_pred --CcEEEEEEeCC
Q 021975 267 --GGVFVGTTFLR 277 (304)
Q Consensus 267 --gG~lvi~~~~~ 277 (304)
||.+++.+...
T Consensus 334 ~~g~~~~iit~~~ 346 (384)
T 3ldg_A 334 LKTWSQFILTNDT 346 (384)
T ss_dssp CTTSEEEEEESCT
T ss_pred CCCcEEEEEECCH
Confidence 99999888644
No 256
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.14 E-value=4e-10 Score=100.88 Aligned_cols=117 Identities=12% Similarity=0.067 Sum_probs=86.0
Q ss_pred HHHhhcccCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC-
Q 021975 158 AQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS- 235 (304)
Q Consensus 158 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~- 235 (304)
+...+...++.+|||+|||+|..+..+++. +...+|+++|+++.+++.++++++..+. .++.++.+|+..++...
T Consensus 94 ~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~---~~v~~~~~D~~~~~~~~~ 170 (309)
T 2b9e_A 94 PAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV---SCCELAEEDFLAVSPSDP 170 (309)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCGGGSCTTCG
T ss_pred HHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CeEEEEeCChHhcCcccc
Confidence 344556677889999999999999999886 3346999999999999999999998873 57999999987765322
Q ss_pred --CccceEEec------chhccCCC-----------H-------HHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 236 --GFVDAVHAG------AALHCWPS-----------P-------SNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 236 --~~fD~V~~~------~vl~h~~d-----------~-------~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
.+||.|++. .++..-+| . ..+|+.+.++|+ ||+|+.+|..-.
T Consensus 171 ~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~ 238 (309)
T 2b9e_A 171 RYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLC 238 (309)
T ss_dssp GGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCC
T ss_pred ccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCC
Confidence 579999972 33332222 1 135777777787 999998876543
No 257
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.10 E-value=1.3e-10 Score=106.82 Aligned_cols=112 Identities=15% Similarity=0.213 Sum_probs=84.1
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-
Q 021975 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP- 232 (304)
Q Consensus 154 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp- 232 (304)
+.+.+.+.+... +.+|||+|||+|.++..+++... +|+|+|+++.+++.|+++++.+++ .++.++.+|+.++.
T Consensus 202 l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~~~--~V~gvd~~~~ai~~a~~n~~~ng~---~~v~~~~~d~~~~~~ 275 (369)
T 3bt7_A 202 MLEWALDVTKGS-KGDLLELYCGNGNFSLALARNFD--RVLATEIAKPSVAAAQYNIAANHI---DNVQIIRMAAEEFTQ 275 (369)
T ss_dssp HHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGGSS--EEEEECCCHHHHHHHHHHHHHTTC---CSEEEECCCSHHHHH
T ss_pred HHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHHcCC---CceEEEECCHHHHHH
Confidence 344455555433 57899999999999999998765 999999999999999999998873 58999999986642
Q ss_pred -CCC--------------CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 233 -FAS--------------GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 233 -~~~--------------~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+.. .+||+|++.--- ..+..++.+.|+++|.++..+...
T Consensus 276 ~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr------~g~~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 276 AMNGVREFNRLQGIDLKSYQCETIFVDPPR------SGLDSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp HHSSCCCCTTGGGSCGGGCCEEEEEECCCT------TCCCHHHHHHHTTSSEEEEEESCH
T ss_pred HHhhccccccccccccccCCCCEEEECcCc------cccHHHHHHHHhCCCEEEEEECCH
Confidence 111 379999874211 123567788888999988877543
No 258
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.05 E-value=4.2e-10 Score=99.59 Aligned_cols=96 Identities=13% Similarity=-0.010 Sum_probs=70.4
Q ss_pred cccCCCeEEEEcC------CccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEE-EEccCCCCCCC
Q 021975 163 KSAQGGLLVDVSC------GSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLAL-VRADVCRLPFA 234 (304)
Q Consensus 163 ~~~~~~~vLDiGc------G~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~-~~~d~~~lp~~ 234 (304)
...++.+|||+|| |+|. ..+++. ++..+|+|+|+++. + .++.+ +++|+.+++++
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v---------------~~v~~~i~gD~~~~~~~ 121 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V---------------SDADSTLIGDCATVHTA 121 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B---------------CSSSEEEESCGGGCCCS
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C---------------CCCEEEEECccccCCcc
Confidence 4456789999999 4466 334444 33569999999987 1 25778 99999887764
Q ss_pred CCccceEEecchhc--------cC---CCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 235 SGFVDAVHAGAALH--------CW---PSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 235 ~~~fD~V~~~~vl~--------h~---~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++||+|++....+ +. .....+++++.++|||||+|++..+..
T Consensus 122 -~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 122 -NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp -SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred -CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 6899999964322 11 112478999999999999999987654
No 259
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.05 E-value=7.6e-10 Score=96.36 Aligned_cols=85 Identities=12% Similarity=0.196 Sum_probs=70.7
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC
Q 021975 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (304)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (304)
....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.++++++. ..++.++++|+.++
T Consensus 15 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~--~V~avEid~~~~~~~~~~~~~-----~~~v~~i~~D~~~~ 87 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECD--NLALVEIDRDLVAFLQKKYNQ-----QKNITIYQNDALQF 87 (255)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSS--EEEEEECCHHHHHHHHHHHTT-----CTTEEEEESCTTTC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHhh-----CCCcEEEEcchHhC
Confidence 45566777777777788999999999999999999875 999999999999999998764 25899999999998
Q ss_pred CCCC----CccceEEec
Q 021975 232 PFAS----GFVDAVHAG 244 (304)
Q Consensus 232 p~~~----~~fD~V~~~ 244 (304)
++++ +.|| |+++
T Consensus 88 ~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 88 DFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp CGGGSCCSSCEE-EEEE
T ss_pred CHHHhccCCCeE-EEec
Confidence 7643 4688 5554
No 260
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.03 E-value=8e-10 Score=106.26 Aligned_cols=130 Identities=11% Similarity=0.015 Sum_probs=100.3
Q ss_pred CCCCCcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCC------------------CCeEEEEeCCHHHHHHHH
Q 021975 146 SGFPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT------------------YSGVVALDFSENMLRQCY 207 (304)
Q Consensus 146 ~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~------------------~~~v~giD~s~~~~~~a~ 207 (304)
+.++++....+++.+.+.+.++.+|||.+||+|.++..+.+... ..+++|+|+++.+++.|+
T Consensus 149 G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~ 228 (541)
T 2ar0_A 149 GQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLAL 228 (541)
T ss_dssp -CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHH
T ss_pred CeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHH
Confidence 44778888888888888877788999999999999888775410 137999999999999999
Q ss_pred HHHHhcCccCCC----CeEEEEccCCCCC-CCCCccceEEecchhccCCC--------------HHHHHHHHHHhcccCc
Q 021975 208 DFIKQDNTILTS----NLALVRADVCRLP-FASGFVDAVHAGAALHCWPS--------------PSNAVAEISRILRSGG 268 (304)
Q Consensus 208 ~~~~~~~~~~~~----~i~~~~~d~~~lp-~~~~~fD~V~~~~vl~h~~d--------------~~~~l~~~~r~LkpgG 268 (304)
.++..++. .. .+.+.++|....+ .....||+|+++-.+..... ...++..+.+.|||||
T Consensus 229 ~nl~l~gi--~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gG 306 (541)
T 2ar0_A 229 MNCLLHDI--EGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGG 306 (541)
T ss_dssp HHHHTTTC--CCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEE
T ss_pred HHHHHhCC--CccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCC
Confidence 99887762 21 2778899986543 34568999999754433221 2368999999999999
Q ss_pred EEEEEEeCC
Q 021975 269 VFVGTTFLR 277 (304)
Q Consensus 269 ~lvi~~~~~ 277 (304)
++.++.+..
T Consensus 307 r~a~V~p~~ 315 (541)
T 2ar0_A 307 RAAVVVPDN 315 (541)
T ss_dssp EEEEEEEHH
T ss_pred EEEEEecCc
Confidence 999988754
No 261
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.01 E-value=5.9e-10 Score=100.97 Aligned_cols=111 Identities=13% Similarity=0.123 Sum_probs=82.5
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcC---cc--CCCCeEEEEccCCCCCC----CCC
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDN---TI--LTSNLALVRADVCRLPF----ASG 236 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~---~~--~~~~i~~~~~d~~~lp~----~~~ 236 (304)
++.+||+||||+|..+..+.+.++ .+|+++|+++.+++.|++++...+ +. ...+++++.+|+....- ..+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 467999999999999999998875 799999999999999999875321 00 01279999999876431 357
Q ss_pred ccceEEecchh-ccCCCH-----HHHHHHH----HHhcccCcEEEEEEeCC
Q 021975 237 FVDAVHAGAAL-HCWPSP-----SNAVAEI----SRILRSGGVFVGTTFLR 277 (304)
Q Consensus 237 ~fD~V~~~~vl-~h~~d~-----~~~l~~~----~r~LkpgG~lvi~~~~~ 277 (304)
+||+|++...- ..-..| ..+++.+ .++|+|||++++..-..
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 89999996432 111122 4666776 89999999999876544
No 262
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.00 E-value=8.4e-10 Score=101.46 Aligned_cols=102 Identities=16% Similarity=0.194 Sum_probs=82.4
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc---------------CccCCCCeEEEEccCCC
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD---------------NTILTSNLALVRADVCR 230 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---------------~~~~~~~i~~~~~d~~~ 230 (304)
++.+|||+|||+|..+..+++..+..+|+++|+++.+++.++++++.+ ++ .++.++++|+..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl---~~i~v~~~Da~~ 123 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE---KTIVINHDDANR 123 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS---SEEEEEESCHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC---CceEEEcCcHHH
Confidence 578999999999999999998854568999999999999999999987 52 349999999866
Q ss_pred CCC-CCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEE
Q 021975 231 LPF-ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 231 lp~-~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
+.. ..+.||+|++.- ...+..+++.+.+.||+||+++++.
T Consensus 124 ~~~~~~~~fD~I~lDP----~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 124 LMAERHRYFHFIDLDP----FGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHSTTCEEEEEECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhccCCCCEEEeCC----CCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 421 135799999642 1234678999999999999877764
No 263
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.98 E-value=1.3e-09 Score=95.74 Aligned_cols=86 Identities=16% Similarity=0.193 Sum_probs=71.9
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC
Q 021975 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (304)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (304)
....+.+.+.+...++ +|||||||+|.++..+++.+. +|+|+|+++.+++.+++++.. .++.++++|+.++
T Consensus 33 ~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~--~V~avEid~~~~~~l~~~~~~------~~v~vi~~D~l~~ 103 (271)
T 3fut_A 33 EAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGA--EVTAIEKDLRLRPVLEETLSG------LPVRLVFQDALLY 103 (271)
T ss_dssp HHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTC--CEEEEESCGGGHHHHHHHTTT------SSEEEEESCGGGS
T ss_pred HHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcCC------CCEEEEECChhhC
Confidence 4556677777777778 999999999999999999875 999999999999999997642 5799999999888
Q ss_pred CCCCC-ccceEEecch
Q 021975 232 PFASG-FVDAVHAGAA 246 (304)
Q Consensus 232 p~~~~-~fD~V~~~~v 246 (304)
++++. .+|.|+++.-
T Consensus 104 ~~~~~~~~~~iv~NlP 119 (271)
T 3fut_A 104 PWEEVPQGSLLVANLP 119 (271)
T ss_dssp CGGGSCTTEEEEEEEC
T ss_pred ChhhccCccEEEecCc
Confidence 77543 6888888654
No 264
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.97 E-value=1.8e-09 Score=99.44 Aligned_cols=104 Identities=14% Similarity=0.138 Sum_probs=83.0
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHHhcCccCCCC-eEEEEccCCCCC--CCCCccce
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSN-LALVRADVCRLP--FASGFVDA 240 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~giD~s~~~~~~a~~~~~~~~~~~~~~-i~~~~~d~~~lp--~~~~~fD~ 240 (304)
.++.+|||++||+|.++..++....+ .+|+++|+++.+++.++++++.+++ ..+ +.++.+|+.++. ...+.||+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl--~~~~v~v~~~Da~~~l~~~~~~~fD~ 128 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI--PEDRYEIHGMEANFFLRKEWGFGFDY 128 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC--CGGGEEEECSCHHHHHHSCCSSCEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC--CCceEEEEeCCHHHHHHHhhCCCCcE
Confidence 35779999999999999999986322 5899999999999999999999883 344 999999985531 11457999
Q ss_pred EEecchhccCCCHHHHHHHHHHhcccCcEEEEEE
Q 021975 241 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 241 V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
|++.- ...+..+++.+.+.|++||+|+++.
T Consensus 129 V~lDP----~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 129 VDLDP----FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECC----CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 99864 1234578999999999999777765
No 265
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.97 E-value=8.2e-10 Score=98.38 Aligned_cols=86 Identities=16% Similarity=0.276 Sum_probs=70.9
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC--C
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--F 233 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--~ 233 (304)
+.+.+.+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.|+++++..+ .++.++++|+.+++ +
T Consensus 16 ~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g----~~v~~v~~d~~~l~~~l 91 (301)
T 1m6y_A 16 REVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS----DRVSLFKVSYREADFLL 91 (301)
T ss_dssp HHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT----TTEEEEECCGGGHHHHH
T ss_pred HHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC----CcEEEEECCHHHHHHHH
Confidence 34555666667889999999999999999998656799999999999999999987764 68999999998765 2
Q ss_pred C---CCccceEEecc
Q 021975 234 A---SGFVDAVHAGA 245 (304)
Q Consensus 234 ~---~~~fD~V~~~~ 245 (304)
. ..+||.|++..
T Consensus 92 ~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 92 KTLGIEKVDGILMDL 106 (301)
T ss_dssp HHTTCSCEEEEEEEC
T ss_pred HhcCCCCCCEEEEcC
Confidence 1 15799999854
No 266
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.95 E-value=1.8e-08 Score=84.23 Aligned_cols=112 Identities=9% Similarity=0.070 Sum_probs=82.2
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccC--CCCeEEEEccCCCC
Q 021975 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTIL--TSNLALVRADVCRL 231 (304)
Q Consensus 154 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~--~~~i~~~~~d~~~l 231 (304)
..+++...+. +..+|||+|| |+.+..+++.. +++|+.+|.+++..+.|+++++..+ . ..++.++.+|+...
T Consensus 20 ~~~~L~~~l~--~a~~VLEiGt--GySTl~lA~~~-~g~VvtvE~d~~~~~~ar~~l~~~g--~~~~~~I~~~~gda~~~ 92 (202)
T 3cvo_A 20 EAEALRMAYE--EAEVILEYGS--GGSTVVAAELP-GKHVTSVESDRAWARMMKAWLAANP--PAEGTEVNIVWTDIGPT 92 (202)
T ss_dssp HHHHHHHHHH--HCSEEEEESC--SHHHHHHHTST-TCEEEEEESCHHHHHHHHHHHHHSC--CCTTCEEEEEECCCSSB
T ss_pred HHHHHHHHhh--CCCEEEEECc--hHHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHcC--CCCCCceEEEEeCchhh
Confidence 3444544333 3679999998 46777777642 5699999999999999999999887 3 56899999997542
Q ss_pred ---------------C--------C-CCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 232 ---------------P--------F-ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 232 ---------------p--------~-~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+ . ..++||+|+...- .....+..+.+.|+|||++++-.+..
T Consensus 93 ~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~-----k~~~~~~~~l~~l~~GG~Iv~DNv~~ 157 (202)
T 3cvo_A 93 GDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGR-----FRVGCALATAFSITRPVTLLFDDYSQ 157 (202)
T ss_dssp CGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSS-----SHHHHHHHHHHHCSSCEEEEETTGGG
T ss_pred hcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCC-----CchhHHHHHHHhcCCCeEEEEeCCcC
Confidence 1 1 2378999999763 22356677889999999996655333
No 267
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.93 E-value=1.1e-09 Score=95.42 Aligned_cols=114 Identities=13% Similarity=0.059 Sum_probs=80.3
Q ss_pred HHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCH-------HHHHHHHHHHHhcCccCCCCeEEEEccCCC
Q 021975 158 AQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSE-------NMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (304)
Q Consensus 158 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~-------~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (304)
+...+...++.+|||+|||+|.++..+++.+. +|+|+|+++ .+++.|+++.+.++ ...++.++++|+.+
T Consensus 75 l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~g~--~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~--~~~ri~~~~~d~~~ 150 (258)
T 2r6z_A 75 IAKAVNHTAHPTVWDATAGLGRDSFVLASLGL--TVTAFEQHPAVACLLSDGIRRALLNPETQD--TAARINLHFGNAAE 150 (258)
T ss_dssp HHHHTTGGGCCCEEETTCTTCHHHHHHHHTTC--CEEEEECCHHHHHHHHHHHHHHHHSHHHHH--HHTTEEEEESCHHH
T ss_pred HHHHhCcCCcCeEEEeeCccCHHHHHHHHhCC--EEEEEECChhhhHHHHHHHHHHHhHHHhhC--CccCeEEEECCHHH
Confidence 33334444568999999999999999999865 999999999 99999988776655 23459999999876
Q ss_pred C-C-CCC--CccceEEecchhccCC--------------------CHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 231 L-P-FAS--GFVDAVHAGAALHCWP--------------------SPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 231 l-p-~~~--~~fD~V~~~~vl~h~~--------------------d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
+ + +++ ++||+|++.-.+.|.. +...+++++.++.+. .+++-.+.+
T Consensus 151 ~l~~~~~~~~~fD~V~~dP~~~~~~~sa~vkk~~~~l~~l~~~~~d~~~ll~~a~~~~~~--~vvvk~p~~ 219 (258)
T 2r6z_A 151 QMPALVKTQGKPDIVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEVVLLHTARQTAKK--RVVVKRPRL 219 (258)
T ss_dssp HHHHHHHHHCCCSEEEECCCC-------------HHHHHHHSHHHHHHHHHHHHHHHCSS--EEEEEEETT
T ss_pred HHHhhhccCCCccEEEECCCCCCcccchHHHHHHHHhhhhcCCCccHHHHHHHHHHhcCc--EEEEEcCCC
Confidence 4 2 333 6899999976555422 223455566666543 566655544
No 268
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.90 E-value=2.2e-08 Score=96.03 Aligned_cols=148 Identities=16% Similarity=0.037 Sum_probs=110.4
Q ss_pred chhhHHHHHhHHHhhh-----cCCCCCcHHHHHHHHHhhc----ccCCCeEEEEcCCccHHHHHHHHhC---CCCeEEEE
Q 021975 129 PFVSFLYERGWRQNFN-----RSGFPGPDEEFKMAQEYFK----SAQGGLLVDVSCGSGLFSRKFAKSG---TYSGVVAL 196 (304)
Q Consensus 129 ~~~s~~~~~~w~~~~~-----~~~~~~~~~~~~~l~~~l~----~~~~~~vLDiGcG~G~~~~~l~~~~---~~~~v~gi 196 (304)
+.+...|+....+... .+.|++|..+.+++.+.+. +.++.+|||.+||+|.++..+.+.. ...+++|+
T Consensus 175 D~lG~~YE~ll~~~a~~~~k~~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~ 254 (542)
T 3lkd_A 175 DMLGDAYEYLIGQFATDSGKKAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQ 254 (542)
T ss_dssp THHHHHHHHHHHHHHCC---CCSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEE
T ss_pred hHHHHHHHHHHHHHHHHhcccCCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEE
Confidence 4556666665544322 2457889999999988887 4467899999999999988887762 24589999
Q ss_pred eCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC--C-CCCCccceEEecchhcc-------------------CC---
Q 021975 197 DFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--P-FASGFVDAVHAGAALHC-------------------WP--- 251 (304)
Q Consensus 197 D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p-~~~~~fD~V~~~~vl~h-------------------~~--- 251 (304)
|+++.+.+.|+.++..++. ...++.+.++|.... | .....||+|+++--+.. ++
T Consensus 255 Eid~~~~~lA~~Nl~l~gi-~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s 333 (542)
T 3lkd_A 255 ELNTSTYNLARMNMILHGV-PIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKS 333 (542)
T ss_dssp ESCHHHHHHHHHHHHHTTC-CGGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTT
T ss_pred ECcHHHHHHHHHHHHHcCC-CcCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCc
Confidence 9999999999999887772 114688999998765 3 45678999998622110 11
Q ss_pred C-HHHHHHHHHHhcc-cCcEEEEEEeCC
Q 021975 252 S-PSNAVAEISRILR-SGGVFVGTTFLR 277 (304)
Q Consensus 252 d-~~~~l~~~~r~Lk-pgG~lvi~~~~~ 277 (304)
+ ...++..+.+.|| +||++.++.+..
T Consensus 334 ~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 334 KADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp CCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred hhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 0 1248999999999 999999988765
No 269
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.90 E-value=3.4e-09 Score=101.82 Aligned_cols=146 Identities=14% Similarity=0.037 Sum_probs=105.9
Q ss_pred chhhHHHHHhHHHhh-----hcCCCCCcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCC--------------
Q 021975 129 PFVSFLYERGWRQNF-----NRSGFPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-------------- 189 (304)
Q Consensus 129 ~~~s~~~~~~w~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-------------- 189 (304)
..+...|+....+.. ..+.|++|..+.+++.+.+.+.++ +|||.+||+|.++..+.+...
T Consensus 203 D~lG~~yE~ll~~~a~~~~k~~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~ 281 (544)
T 3khk_A 203 DILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQK 281 (544)
T ss_dssp CSHHHHHHHHHHHHHHTTTCCSTTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHG
T ss_pred hHHHHHHHHHHHHHHHhhCccCCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHh
Confidence 455556665544322 124578999999999998877554 999999999999877754210
Q ss_pred -CCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-CCCCccceEEecchhcc------------------
Q 021975 190 -YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FASGFVDAVHAGAALHC------------------ 249 (304)
Q Consensus 190 -~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-~~~~~fD~V~~~~vl~h------------------ 249 (304)
...++|+|+++.+++.|+.++..++ ...++.+.++|....+ +....||+|+++--+..
T Consensus 282 ~~~~i~G~Eid~~~~~lA~~Nl~l~g--i~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~ 359 (544)
T 3khk_A 282 KQISVYGQESNPTTWKLAAMNMVIRG--IDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINT 359 (544)
T ss_dssp GGEEEEECCCCHHHHHHHHHHHHHTT--CCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECC
T ss_pred hhceEEEEeCCHHHHHHHHHHHHHhC--CCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCc
Confidence 3489999999999999999998877 2334445788875544 45678999999633221
Q ss_pred -------CC---C-HHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 250 -------WP---S-PSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 250 -------~~---d-~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
++ + ...++..+.+.|||||++.++.+..
T Consensus 360 ~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 360 NGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp C--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred ccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 11 0 1258999999999999999988754
No 270
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.89 E-value=8.2e-09 Score=102.17 Aligned_cols=127 Identities=15% Similarity=0.081 Sum_probs=92.1
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhC----------------------------------------
Q 021975 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG---------------------------------------- 188 (304)
Q Consensus 149 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---------------------------------------- 188 (304)
+..+.+...+.......++..|||.+||+|.++..++..+
T Consensus 173 pl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~ 252 (703)
T 3v97_A 173 PIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 252 (703)
T ss_dssp SSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcc
Confidence 4445666667766666677899999999999998877642
Q ss_pred --CCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC--CCCCCccceEEecchhc-cCC---CHHHH---H
Q 021975 189 --TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVHAGAALH-CWP---SPSNA---V 257 (304)
Q Consensus 189 --~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l--p~~~~~fD~V~~~~vl~-h~~---d~~~~---l 257 (304)
+..+++|+|+++.+++.|+.+++.++ ....+.+.++|+.++ |...++||+|+++--.. .+. +...+ +
T Consensus 253 ~~~~~~i~G~Did~~av~~A~~N~~~ag--v~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l 330 (703)
T 3v97_A 253 AEYSSHFYGSDSDARVIQRARTNARLAG--IGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLL 330 (703)
T ss_dssp HHCCCCEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHH
T ss_pred ccCCccEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHH
Confidence 12489999999999999999999988 455699999999876 33344899999973321 111 22333 4
Q ss_pred HHHHHhcccCcEEEEEEeCC
Q 021975 258 AEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 258 ~~~~r~LkpgG~lvi~~~~~ 277 (304)
.++.+.+.|||.+++.+...
T Consensus 331 ~~~lk~~~~g~~~~ilt~~~ 350 (703)
T 3v97_A 331 GRIMKNQFGGWNLSLFSASP 350 (703)
T ss_dssp HHHHHHHCTTCEEEEEESCH
T ss_pred HHHHHhhCCCCeEEEEeCCH
Confidence 44455556899999988654
No 271
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.85 E-value=6.9e-09 Score=100.63 Aligned_cols=100 Identities=13% Similarity=0.123 Sum_probs=74.8
Q ss_pred CCeEEEEcCCccHHHHHHHHhC----CCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEE
Q 021975 167 GGLLVDVSCGSGLFSRKFAKSG----TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 242 (304)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~----~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~ 242 (304)
...|||+|||+|-+.....+.+ ...+|+++|-++ ++..+++..+.++ ...+|+++.+|++++..+ +++|+|+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~--~~dkVtVI~gd~eev~LP-EKVDIIV 433 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEE--WGSQVTVVSSDMREWVAP-EKADIIV 433 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHT--TGGGEEEEESCTTTCCCS-SCEEEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhcc--CCCeEEEEeCcceeccCC-cccCEEE
Confidence 4579999999998854444332 223789999997 6677888888888 578999999999998776 5899999
Q ss_pred ecc---hhccCCCHHHHHHHHHHhcccCcEEE
Q 021975 243 AGA---ALHCWPSPSNAVAEISRILRSGGVFV 271 (304)
Q Consensus 243 ~~~---vl~h~~d~~~~l~~~~r~LkpgG~lv 271 (304)
+-. .+-+-.-+ +.+....|.|||||+++
T Consensus 434 SEwMG~fLl~E~ml-evL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 434 SELLGSFADNELSP-ECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCCBTTBGGGCHH-HHHHHHGGGEEEEEEEE
T ss_pred EEcCcccccccCCH-HHHHHHHHhcCCCcEEc
Confidence 832 12111233 67888899999999864
No 272
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.82 E-value=8.3e-09 Score=90.94 Aligned_cols=77 Identities=14% Similarity=0.209 Sum_probs=63.3
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCC--CeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCC
Q 021975 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTY--SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (304)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~--~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~ 229 (304)
....+.+.+.+...++.+|||||||+|.++..+++.+.. .+|+|+|+++.+++.++++. . .++.++++|+.
T Consensus 28 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~---~----~~v~~i~~D~~ 100 (279)
T 3uzu_A 28 HGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF---G----ELLELHAGDAL 100 (279)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH---G----GGEEEEESCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc---C----CCcEEEECChh
Confidence 345566777777777889999999999999999998651 23999999999999999873 2 57999999999
Q ss_pred CCCCCC
Q 021975 230 RLPFAS 235 (304)
Q Consensus 230 ~lp~~~ 235 (304)
++++++
T Consensus 101 ~~~~~~ 106 (279)
T 3uzu_A 101 TFDFGS 106 (279)
T ss_dssp GCCGGG
T ss_pred cCChhH
Confidence 887653
No 273
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.82 E-value=2.6e-08 Score=86.30 Aligned_cols=76 Identities=17% Similarity=0.388 Sum_probs=63.3
Q ss_pred HHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC
Q 021975 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (304)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l 231 (304)
....+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+++.+++.++++ . ..++.++++|+..+
T Consensus 17 ~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~-~~~v~avEid~~~~~~~~~~-~------~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHP-LKKLYVIELDREMVENLKSI-G------DERLEVINEDASKF 88 (249)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSC-CSEEEEECCCHHHHHHHTTS-C------CTTEEEECSCTTTC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcC-CCeEEEEECCHHHHHHHHhc-c------CCCeEEEEcchhhC
Confidence 3455667777777778899999999999999999985 34999999999999999875 1 25799999999998
Q ss_pred CCCC
Q 021975 232 PFAS 235 (304)
Q Consensus 232 p~~~ 235 (304)
++++
T Consensus 89 ~~~~ 92 (249)
T 3ftd_A 89 PFCS 92 (249)
T ss_dssp CGGG
T ss_pred ChhH
Confidence 8764
No 274
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.80 E-value=2.1e-08 Score=86.93 Aligned_cols=118 Identities=14% Similarity=0.158 Sum_probs=77.8
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC
Q 021975 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (304)
Q Consensus 154 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 233 (304)
+.++... ....++.+|||+|||+|.|+..+++..+...+.|+|+..++...... ... ...++..+..++....+
T Consensus 63 L~ei~ek-~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~-~~~----~g~~ii~~~~~~dv~~l 136 (277)
T 3evf_A 63 LRWFHER-GYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMN-VQS----LGWNIITFKDKTDIHRL 136 (277)
T ss_dssp HHHHHHT-TSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCC-CCB----TTGGGEEEECSCCTTTS
T ss_pred HHHHHHh-CCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccc-cCc----CCCCeEEEeccceehhc
Confidence 3444444 34456779999999999999988876434578888887432100000 000 01145666777665667
Q ss_pred CCCccceEEecchhccCCCHH-------HHHHHHHHhcccC-cEEEEEEeCCC
Q 021975 234 ASGFVDAVHAGAALHCWPSPS-------NAVAEISRILRSG-GVFVGTTFLRY 278 (304)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~-------~~l~~~~r~Lkpg-G~lvi~~~~~~ 278 (304)
..+.||+|++..+.+ ..... .+|+.+.++|||| |.|++-.+..+
T Consensus 137 ~~~~~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~py 188 (277)
T 3evf_A 137 EPVKCDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPY 188 (277)
T ss_dssp CCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTT
T ss_pred CCCCccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCC
Confidence 788999999977555 33221 3468889999999 99999887743
No 275
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.73 E-value=1.2e-07 Score=83.67 Aligned_cols=110 Identities=15% Similarity=0.249 Sum_probs=85.4
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CccCCCCeEEEEccCCCC-CCCCCccceE
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCRL-PFASGFVDAV 241 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~l-p~~~~~fD~V 241 (304)
...++||-||.|.|..++.+.+..+..+++.+|+++.+++.+++.+... +....++++++.+|.... .-..++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 3467999999999999999999866679999999999999999987431 111357899999999764 3446789999
Q ss_pred Eecchh-----ccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 242 HAGAAL-----HCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 242 ~~~~vl-----~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
+....= .++ --..+++.+++.|+|||+++...-
T Consensus 162 i~D~~dp~~~~~~L-~t~eFy~~~~~~L~p~Gv~v~q~~ 199 (294)
T 3o4f_A 162 ISDCTDPIGPGESL-FTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EESCCCCCCTTCCS-SCCHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEeCCCcCCCchhh-cCHHHHHHHHHHhCCCCEEEEecC
Confidence 985321 111 113689999999999999998653
No 276
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.70 E-value=9.3e-09 Score=89.31 Aligned_cols=86 Identities=8% Similarity=0.094 Sum_probs=64.0
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC
Q 021975 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (304)
Q Consensus 153 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp 232 (304)
...+.+.+.+...++.+|||||||+|.++. +.+ +...+|+|+|+++.+++.++++++.. .++.++++|+..++
T Consensus 8 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~~-----~~v~~i~~D~~~~~ 80 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFLG-----PKLTIYQQDAMTFN 80 (252)
T ss_dssp HHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTTG-----GGEEEECSCGGGCC
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhccC-----CceEEEECchhhCC
Confidence 345566666666678899999999999999 654 54223999999999999999865431 47999999998877
Q ss_pred CCCC-----ccceEEecc
Q 021975 233 FASG-----FVDAVHAGA 245 (304)
Q Consensus 233 ~~~~-----~fD~V~~~~ 245 (304)
+++. ..|.|+++.
T Consensus 81 ~~~~~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 81 FGELAEKMGQPLRVFGNL 98 (252)
T ss_dssp HHHHHHHHTSCEEEEEEC
T ss_pred HHHhhcccCCceEEEECC
Confidence 5431 235666653
No 277
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.69 E-value=1.1e-08 Score=94.41 Aligned_cols=74 Identities=12% Similarity=0.144 Sum_probs=63.3
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CccCCCCeEEEEccCCCC-CC-CCCccceE
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCRL-PF-ASGFVDAV 241 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~~~~~~i~~~~~d~~~l-p~-~~~~fD~V 241 (304)
++.+|||+|||+|..+..+++.+. +|+|+|+++.+++.|+++++.. + . .++.++++|+.+. +. ++++||+|
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~--~V~~VD~s~~~l~~Ar~N~~~~~~g--l-~~i~~i~~Da~~~L~~~~~~~fDvV 167 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKAS--QGIYIERNDETAVAARHNIPLLLNE--G-KDVNILTGDFKEYLPLIKTFHPDYI 167 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHSCT--T-CEEEEEESCGGGSHHHHHHHCCSEE
T ss_pred CCCEEEEeCCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHhHHHhccC--C-CcEEEEECcHHHhhhhccCCCceEE
Confidence 378999999999999999998875 9999999999999999999876 5 2 6899999999774 32 23589999
Q ss_pred Eec
Q 021975 242 HAG 244 (304)
Q Consensus 242 ~~~ 244 (304)
++.
T Consensus 168 ~lD 170 (410)
T 3ll7_A 168 YVD 170 (410)
T ss_dssp EEC
T ss_pred EEC
Confidence 994
No 278
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.65 E-value=9e-08 Score=87.48 Aligned_cols=113 Identities=17% Similarity=0.157 Sum_probs=77.7
Q ss_pred CCeEEEEcCCccHHHHHHH--------Hh-------CCCCeEEEEeCCHHHHHHHHHHHHhcCc----------c--CCC
Q 021975 167 GGLLVDVSCGSGLFSRKFA--------KS-------GTYSGVVALDFSENMLRQCYDFIKQDNT----------I--LTS 219 (304)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~--------~~-------~~~~~v~giD~s~~~~~~a~~~~~~~~~----------~--~~~ 219 (304)
..+|+|+|||+|.++..+. +. .+..+|+.-|+-.+.....-+.+..... . ..-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 4689999999999887762 22 1567888989766554443333332110 0 001
Q ss_pred CeEEEEccCCCCCCCCCccceEEecchhccCCC--------------------------------------HHHHHHHHH
Q 021975 220 NLALVRADVCRLPFASGFVDAVHAGAALHCWPS--------------------------------------PSNAVAEIS 261 (304)
Q Consensus 220 ~i~~~~~d~~~lp~~~~~fD~V~~~~vl~h~~d--------------------------------------~~~~l~~~~ 261 (304)
-+.-+.+.+..-.|++++||+|+++.+||++.+ ...+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123344555555688999999999999999873 334688889
Q ss_pred HhcccCcEEEEEEeCCCC
Q 021975 262 RILRSGGVFVGTTFLRYT 279 (304)
Q Consensus 262 r~LkpgG~lvi~~~~~~~ 279 (304)
+.|+|||++++....+..
T Consensus 213 ~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHEEEEEEEEEEEEECCC
T ss_pred HHhCCCCEEEEEEecCCC
Confidence 999999999999998753
No 279
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.64 E-value=2.6e-08 Score=86.61 Aligned_cols=91 Identities=15% Similarity=0.057 Sum_probs=65.6
Q ss_pred HHHHhhcccCC--CeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCc--cC----CCCeEEEEccC
Q 021975 157 MAQEYFKSAQG--GLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNT--IL----TSNLALVRADV 228 (304)
Q Consensus 157 ~l~~~l~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~--~~----~~~i~~~~~d~ 228 (304)
.+.+.+...++ .+|||+|||+|..+..++..+. +|+++|.++.+++.++++++.... .. ..+++++++|.
T Consensus 77 ~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~--~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 77 AVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGC--RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp HHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTC--CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 34445544455 7999999999999999999875 899999999887777766543210 00 14699999998
Q ss_pred CC-CCCCCCccceEEecchhcc
Q 021975 229 CR-LPFASGFVDAVHAGAALHC 249 (304)
Q Consensus 229 ~~-lp~~~~~fD~V~~~~vl~h 249 (304)
.+ ++.....||+|++.-.+.+
T Consensus 155 ~~~L~~~~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 155 LTALTDITPRPQVVYLDPMFPH 176 (258)
T ss_dssp HHHSTTCSSCCSEEEECCCCCC
T ss_pred HHHHHhCcccCCEEEEcCCCCC
Confidence 65 2321247999999766655
No 280
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.63 E-value=4.8e-08 Score=94.87 Aligned_cols=101 Identities=10% Similarity=0.104 Sum_probs=72.7
Q ss_pred CCeEEEEcCCccHHHHHHHH----hC---------CCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC
Q 021975 167 GGLLVDVSCGSGLFSRKFAK----SG---------TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (304)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~----~~---------~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~ 233 (304)
...|||||||+|-++....+ .+ ...+|+++|.++.++...+.+.. ++ ....|+++.+|++++.+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng--~~d~VtVI~gd~eev~l 486 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RT--WKRRVTIIESDMRSLPG 486 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HT--TTTCSEEEESCGGGHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cC--CCCeEEEEeCchhhccc
Confidence 45899999999999643222 12 23499999999987766666554 55 45789999999998866
Q ss_pred C-----CCccceEEecchhccCC---CHHHHHHHHHHhcccCcEEE
Q 021975 234 A-----SGFVDAVHAGAALHCWP---SPSNAVAEISRILRSGGVFV 271 (304)
Q Consensus 234 ~-----~~~fD~V~~~~vl~h~~---d~~~~l~~~~r~LkpgG~lv 271 (304)
+ .+.+|+|++-.. ..+. --.+.|..+.+.|||||+++
T Consensus 487 p~~~~~~ekVDIIVSElm-Gsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 487 IAKDRGFEQPDIIVSELL-GSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHTTCCCCSEEEECCC-BTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccccCCCCcccEEEEecc-ccccchhccHHHHHHHHHhCCCCcEEE
Confidence 3 478999998432 2221 12357777889999999765
No 281
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.60 E-value=3e-07 Score=90.60 Aligned_cols=133 Identities=15% Similarity=0.112 Sum_probs=91.0
Q ss_pred CCCCCcHHHHHHHHHh----hcc--cCCCeEEEEcCCccHHHHHHHHhCC---CCeEEEEeCCHHHHHHH--HHHHHhcC
Q 021975 146 SGFPGPDEEFKMAQEY----FKS--AQGGLLVDVSCGSGLFSRKFAKSGT---YSGVVALDFSENMLRQC--YDFIKQDN 214 (304)
Q Consensus 146 ~~~~~~~~~~~~l~~~----l~~--~~~~~vLDiGcG~G~~~~~l~~~~~---~~~v~giD~s~~~~~~a--~~~~~~~~ 214 (304)
+.++++..+.+.+... +.. .++.+|||.|||+|.++..+++... ..+++|+|+++.+++.| +.++..+.
T Consensus 295 GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~ 374 (878)
T 3s1s_A 295 GVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQ 374 (878)
T ss_dssp BSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTT
T ss_pred ceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhh
Confidence 4578888888887776 222 2477999999999999999988753 35799999999999999 54443311
Q ss_pred cc-CCCCeEEEEccCCCC-CCCCCccceEEecchhcc-CC---------------------------C-HHHHHHHHHHh
Q 021975 215 TI-LTSNLALVRADVCRL-PFASGFVDAVHAGAALHC-WP---------------------------S-PSNAVAEISRI 263 (304)
Q Consensus 215 ~~-~~~~i~~~~~d~~~l-p~~~~~fD~V~~~~vl~h-~~---------------------------d-~~~~l~~~~r~ 263 (304)
.. ......+...|+... +.....||+|+++--... .. + ...++..+.+.
T Consensus 375 LlhGi~~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~l 454 (878)
T 3s1s_A 375 LVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTEL 454 (878)
T ss_dssp TCBTTBCCEEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHH
T ss_pred hhcCCCcceEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHh
Confidence 10 012234555555442 234568999999643311 10 1 22468889999
Q ss_pred cccCcEEEEEEeCCC
Q 021975 264 LRSGGVFVGTTFLRY 278 (304)
Q Consensus 264 LkpgG~lvi~~~~~~ 278 (304)
||+||++.+..+...
T Consensus 455 LKpGGrLAfIlP~s~ 469 (878)
T 3s1s_A 455 VQDGTVISAIMPKQY 469 (878)
T ss_dssp SCTTCEEEEEEETHH
T ss_pred cCCCcEEEEEEChHH
Confidence 999999999998763
No 282
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.59 E-value=8.1e-08 Score=87.92 Aligned_cols=109 Identities=16% Similarity=0.074 Sum_probs=75.2
Q ss_pred CCeEEEEcCCccHHHHHHHHh-----------------CCCCeEEEEeCC-----------HHHHHHHHHHHHhcCccCC
Q 021975 167 GGLLVDVSCGSGLFSRKFAKS-----------------GTYSGVVALDFS-----------ENMLRQCYDFIKQDNTILT 218 (304)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~-----------------~~~~~v~giD~s-----------~~~~~~a~~~~~~~~~~~~ 218 (304)
..+|+|+||++|.++..+... .|..+|+.-|+- +.+.+.+++. .+ ..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~---~g--~~ 127 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKE---NG--RK 127 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHH---TC--CC
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhh---cc--CC
Confidence 468999999999988777654 245688889976 3333332221 11 11
Q ss_pred CCeEEEEcc---CCCCCCCCCccceEEecchhccCCCHHH---------------------------------------H
Q 021975 219 SNLALVRAD---VCRLPFASGFVDAVHAGAALHCWPSPSN---------------------------------------A 256 (304)
Q Consensus 219 ~~i~~~~~d---~~~lp~~~~~fD~V~~~~vl~h~~d~~~---------------------------------------~ 256 (304)
.+..|+.+. +..-.|++++||+|+++.+||++.+... +
T Consensus 128 ~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~F 207 (384)
T 2efj_A 128 IGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTF 207 (384)
T ss_dssp TTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 233455544 3445688999999999999999865421 2
Q ss_pred HHHHHHhcccCcEEEEEEeCCCCC
Q 021975 257 VAEISRILRSGGVFVGTTFLRYTS 280 (304)
Q Consensus 257 l~~~~r~LkpgG~lvi~~~~~~~~ 280 (304)
|+..++.|+|||++++....+...
T Consensus 208 L~~Ra~eL~pGG~mvl~~~gr~~~ 231 (384)
T 2efj_A 208 LRIHSEELISRGRMLLTFICKEDE 231 (384)
T ss_dssp HHHHHHHEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHhccCCeEEEEEecCCCc
Confidence 556689999999999999987543
No 283
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.55 E-value=2.2e-08 Score=86.93 Aligned_cols=119 Identities=18% Similarity=0.123 Sum_probs=77.0
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC
Q 021975 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (304)
Q Consensus 153 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp 232 (304)
++.++..++ ...++.+|||+|||+|.|+..++...+...++|+|+...+...+.. .+. ...++.....+.....
T Consensus 78 KL~ei~eK~-~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~-~~~----~g~~ii~~~~~~dv~~ 151 (282)
T 3gcz_A 78 KLRWMEERG-YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIM-RTT----LGWNLIRFKDKTDVFN 151 (282)
T ss_dssp HHHHHHHTT-SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCB----TTGGGEEEECSCCGGG
T ss_pred HHHHHHHhc-CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccc-ccc----CCCceEEeeCCcchhh
Confidence 444555554 4456779999999999999998876445579999997643111110 000 0123344444333334
Q ss_pred CCCCccceEEecchhccCCCHH-------HHHHHHHHhcccC--cEEEEEEeCCC
Q 021975 233 FASGFVDAVHAGAALHCWPSPS-------NAVAEISRILRSG--GVFVGTTFLRY 278 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~-------~~l~~~~r~Lkpg--G~lvi~~~~~~ 278 (304)
+....+|+|++....+ ..... .+|+-+..+|||| |.|++-.+..+
T Consensus 152 l~~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~py 205 (282)
T 3gcz_A 152 MEVIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPY 205 (282)
T ss_dssp SCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCC
T ss_pred cCCCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCC
Confidence 5578999999987655 43321 3567778899999 99999888743
No 284
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.53 E-value=2.5e-07 Score=84.13 Aligned_cols=130 Identities=12% Similarity=0.046 Sum_probs=96.7
Q ss_pred HHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcc---CCCCeEEEEccCCCCC-C
Q 021975 158 AQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI---LTSNLALVRADVCRLP-F 233 (304)
Q Consensus 158 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~---~~~~i~~~~~d~~~lp-~ 233 (304)
....+...++.+|||+++|.|.-+.+++..+....++++|+++.-++..+++++..+.. ...++.+...|...++ .
T Consensus 140 ~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~ 219 (359)
T 4fzv_A 140 PVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL 219 (359)
T ss_dssp HHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHH
T ss_pred HHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchh
Confidence 34456777899999999999999999998876678999999999999999998876521 1247888888887653 3
Q ss_pred CCCccceEEec----c----hhccCCC------H----------HHHHHHHHHhcccCcEEEEEEeCCCCCCcccccc
Q 021975 234 ASGFVDAVHAG----A----ALHCWPS------P----------SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGR 287 (304)
Q Consensus 234 ~~~~fD~V~~~----~----vl~h~~d------~----------~~~l~~~~r~LkpgG~lvi~~~~~~~~~~~~~~~ 287 (304)
..+.||.|++. . ++..-++ + .++|+...+.|||||+|+-+|..-....+..+..
T Consensus 220 ~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~ 297 (359)
T 4fzv_A 220 EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQ 297 (359)
T ss_dssp STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHH
T ss_pred ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHH
Confidence 45789999963 2 2221111 1 2578889999999999999998765555554443
No 285
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.47 E-value=1.8e-07 Score=81.33 Aligned_cols=107 Identities=17% Similarity=0.094 Sum_probs=71.6
Q ss_pred CCCeEEEEcCCccHHHHHHHHh-------CCC-----CeEEEEeCCH---HHHH-----------HHHHHHHhcC-----
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKS-------GTY-----SGVVALDFSE---NMLR-----------QCYDFIKQDN----- 214 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~-------~~~-----~~v~giD~s~---~~~~-----------~a~~~~~~~~----- 214 (304)
+..+|||||+|+|..+..+.+. .+. .+++++|..+ +.+. .+++.++...
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4568999999999988776543 453 4899999876 4433 5555554310
Q ss_pred -----cc-CCCCeEEEEccCCC-CCCCC----CccceEEecc-hhccCCC--HHHHHHHHHHhcccCcEEEE
Q 021975 215 -----TI-LTSNLALVRADVCR-LPFAS----GFVDAVHAGA-ALHCWPS--PSNAVAEISRILRSGGVFVG 272 (304)
Q Consensus 215 -----~~-~~~~i~~~~~d~~~-lp~~~----~~fD~V~~~~-vl~h~~d--~~~~l~~~~r~LkpgG~lvi 272 (304)
+. ...+++++.+|+.+ ++..+ ..||+|+... .-..-++ -..+++++.++|||||+|+.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 00 12467899999866 44222 2799999853 2221222 24689999999999999884
No 286
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=98.45 E-value=7.1e-08 Score=65.28 Aligned_cols=47 Identities=15% Similarity=0.142 Sum_probs=39.8
Q ss_pred CcCCeeeccCCCccccccCCCCccccccccCceeeCCCCccccCCCCeeeeecccC
Q 021975 56 LEGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVISG 111 (304)
Q Consensus 56 ~~~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~~~ 111 (304)
-.+++++||+|+++|..... .+.+.|+.|+..|++++|+++++.+..
T Consensus 6 ~LLeiL~CP~ck~~L~~~~~---------~g~LvC~~c~~~YPI~dGIPvmL~~Ea 52 (67)
T 2jny_A 6 QLLEVLACPKDKGPLRYLES---------EQLLVNERLNLAYRIDDGIPVLLIDEA 52 (67)
T ss_dssp GGTCCCBCTTTCCBCEEETT---------TTEEEETTTTEEEEEETTEECCCSSCC
T ss_pred HHHHHhCCCCCCCcCeEeCC---------CCEEEcCCCCccccCCCCEeeeChhHh
Confidence 35788999999999977542 278999999999999999999997743
No 287
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=98.42 E-value=9.5e-08 Score=64.96 Aligned_cols=46 Identities=17% Similarity=0.195 Sum_probs=39.3
Q ss_pred CcCCeeeccCCCccccccCCCCccccccccCceeeCCCCccccCCCCeeeeeccc
Q 021975 56 LEGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVIS 110 (304)
Q Consensus 56 ~~~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~~ 110 (304)
..+++++||+|+++|..... .+.+.|+.|+..|++++|+++++.+.
T Consensus 4 ~LL~iL~CP~ck~~L~~~~~---------~~~LiC~~cg~~YPI~dGIPvmL~~E 49 (68)
T 2jr6_A 4 KFLDILVCPVTKGRLEYHQD---------KQELWSRQAKLAYPIKDGIPYMLENE 49 (68)
T ss_dssp SSSCCCBCSSSCCBCEEETT---------TTEEEETTTTEEEEEETTEECCCTTT
T ss_pred HHhhheECCCCCCcCeEeCC---------CCEEEcCCCCcEecCCCCeeeeChhh
Confidence 35788999999999977542 27899999999999999999999763
No 288
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=98.40 E-value=1e-07 Score=65.22 Aligned_cols=47 Identities=15% Similarity=0.292 Sum_probs=39.9
Q ss_pred CcCCeeeccCCCccccccCCCCccccccccCceeeCCCCccccCCCCeeeeecccC
Q 021975 56 LEGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVISG 111 (304)
Q Consensus 56 ~~~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~~~ 111 (304)
..+++++||+|+++|..... .+.+.|+.|+..|++++|+++++.+..
T Consensus 4 ~LL~iL~CP~ck~~L~~~~~---------~~~LiC~~cg~~YPI~dGIPvmL~~Ea 50 (70)
T 2js4_A 4 RLLDILVCPVCKGRLEFQRA---------QAELVCNADRLAFPVRDGVPIMLEAEA 50 (70)
T ss_dssp CCCCCCBCTTTCCBEEEETT---------TTEEEETTTTEEEEEETTEECCCGGGS
T ss_pred HHhhheECCCCCCcCEEeCC---------CCEEEcCCCCceecCCCCeeeeChhhc
Confidence 35788999999999977542 378999999999999999999998743
No 289
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=98.39 E-value=9.2e-08 Score=65.04 Aligned_cols=46 Identities=17% Similarity=0.380 Sum_probs=39.2
Q ss_pred CcCCeeeccCCCccccccCCCCccccccccCceeeCCCCccccCCCCeeeeeccc
Q 021975 56 LEGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVIS 110 (304)
Q Consensus 56 ~~~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~~ 110 (304)
..+++++||+|+++|..... .+.+.|+.|+..|++++|+++++.+.
T Consensus 4 ~LL~iL~CP~ck~~L~~~~~---------~~~LiC~~cg~~YPI~dGIPvmL~~E 49 (68)
T 2hf1_A 4 KFLEILVCPLCKGPLVFDKS---------KDELICKGDRLAFPIKDGIPMMLESE 49 (68)
T ss_dssp CCEEECBCTTTCCBCEEETT---------TTEEEETTTTEEEEEETTEECCCGGG
T ss_pred HHhhheECCCCCCcCeEeCC---------CCEEEcCCCCcEecCCCCeeeeChhh
Confidence 35688999999999977542 37899999999999999999999764
No 290
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=98.39 E-value=1.1e-07 Score=64.85 Aligned_cols=46 Identities=20% Similarity=0.368 Sum_probs=39.1
Q ss_pred CcCCeeeccCCCccccccCCCCccccccccCceeeCCCCccccCCCCeeeeeccc
Q 021975 56 LEGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVIS 110 (304)
Q Consensus 56 ~~~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~~ 110 (304)
..+++++||+|+++|..... .+.+.|+.|+..|++++|+++++.+.
T Consensus 4 ~LLeiL~CP~ck~~L~~~~~---------~~~LiC~~cg~~YPI~dGIPvmL~~e 49 (69)
T 2pk7_A 4 KLLDILACPICKGPLKLSAD---------KTELISKGAGLAYPIRDGIPVMLESE 49 (69)
T ss_dssp CGGGTCCCTTTCCCCEECTT---------SSEEEETTTTEEEEEETTEECCCGGG
T ss_pred HHHhheeCCCCCCcCeEeCC---------CCEEEcCCCCcEecCcCCeeeeChhh
Confidence 35678999999999976442 37899999999999999999999764
No 291
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.38 E-value=4.2e-06 Score=80.13 Aligned_cols=146 Identities=17% Similarity=0.159 Sum_probs=104.8
Q ss_pred chhhHHHHHhHHHhhh----cCCCCCcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHh----CC---------CC
Q 021975 129 PFVSFLYERGWRQNFN----RSGFPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS----GT---------YS 191 (304)
Q Consensus 129 ~~~s~~~~~~w~~~~~----~~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~----~~---------~~ 191 (304)
+.+...|+..-++.-. .+.|++|..+.+++.+.+.+.++.+|+|.+||+|.++..+.+. .. ..
T Consensus 176 d~lG~~yE~ll~~~~~~~g~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~ 255 (530)
T 3ufb_A 176 HTLSRLYETMLREMRDAAGDSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQES 255 (530)
T ss_dssp HHHHHHHHHHHHHHTTSSSSCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhcCcCceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhh
Confidence 3455566665544221 2348899999999999999888889999999999998776543 11 24
Q ss_pred eEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCC----CCccceEEecchhcc---------CC------C
Q 021975 192 GVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA----SGFVDAVHAGAALHC---------WP------S 252 (304)
Q Consensus 192 ~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~----~~~fD~V~~~~vl~h---------~~------d 252 (304)
.++|+|+++.+...|+-++-.++. ....+..+|....|.. ...||+|+++--+.- .+ +
T Consensus 256 ~i~G~E~~~~~~~la~mNl~lhg~---~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~ 332 (530)
T 3ufb_A 256 SIFGGEAKSLPYLLVQMNLLLHGL---EYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAE 332 (530)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHTC---SCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCB
T ss_pred hhhhhhccHHHHHHHHHHHHhcCC---ccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccch
Confidence 799999999999999998877762 3456777887655432 347999999644321 11 1
Q ss_pred H-HHHHHHHHHhcc-------cCcEEEEEEeCC
Q 021975 253 P-SNAVAEISRILR-------SGGVFVGTTFLR 277 (304)
Q Consensus 253 ~-~~~l~~~~r~Lk-------pgG~lvi~~~~~ 277 (304)
. ..++..+.+.|| +||++.++.+..
T Consensus 333 ~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g 365 (530)
T 3ufb_A 333 TAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNG 365 (530)
T ss_dssp HHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHH
T ss_pred hHHHHHHHHHHHhhhhhhccCCCceEEEEecch
Confidence 1 246788888887 799999988754
No 292
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.38 E-value=8.5e-07 Score=77.92 Aligned_cols=109 Identities=12% Similarity=0.088 Sum_probs=81.5
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhC-----CCCeEEEEeCCHH--------------------------HHHHHHHHHHhc
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSG-----TYSGVVALDFSEN--------------------------MLRQCYDFIKQD 213 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~-----~~~~v~giD~s~~--------------------------~~~~a~~~~~~~ 213 (304)
...+.|||+|+..|..+..++... ++.+++++|..+. .++.++++++..
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 446799999999999888876542 3669999996421 367788999888
Q ss_pred CccCCCCeEEEEccCCC-CC-CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 214 NTILTSNLALVRADVCR-LP-FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 214 ~~~~~~~i~~~~~d~~~-lp-~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
++ ...++.++.+++.+ +| ++.++||+|+...-. .......|+.+...|+|||++++-++.
T Consensus 185 gl-~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD~~ 246 (282)
T 2wk1_A 185 DL-LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDDYM 246 (282)
T ss_dssp TC-CSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESSCT
T ss_pred CC-CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcCCC
Confidence 72 13789999999854 33 445789999987632 112346799999999999999887763
No 293
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.37 E-value=3e-07 Score=83.51 Aligned_cols=111 Identities=14% Similarity=0.131 Sum_probs=80.3
Q ss_pred CCeEEEEcCCccHHHHHHHHh----------------CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEE---EEcc
Q 021975 167 GGLLVDVSCGSGLFSRKFAKS----------------GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLAL---VRAD 227 (304)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~----------------~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~---~~~d 227 (304)
..+|+|+||++|..+..+... .|..+|+.-|+-.+....+-+.+.... ...+..| +.+.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~--~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN--DVDGVCFINGVPGS 129 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC--SCTTCEEEEEEESC
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc--ccCCCEEEEecchh
Confidence 467999999999876554332 345689999988877777766554311 0012233 3455
Q ss_pred CCCCCCCCCccceEEecchhccCCCHH---------------------------------HHHHHHHHhcccCcEEEEEE
Q 021975 228 VCRLPFASGFVDAVHAGAALHCWPSPS---------------------------------NAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 228 ~~~lp~~~~~fD~V~~~~vl~h~~d~~---------------------------------~~l~~~~r~LkpgG~lvi~~ 274 (304)
+..-.|+++++|+|+++.+||++.+.. .+|+..++.|+|||++++..
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 555678899999999999999976422 34888899999999999999
Q ss_pred eCCCC
Q 021975 275 FLRYT 279 (304)
Q Consensus 275 ~~~~~ 279 (304)
..+..
T Consensus 210 ~gr~~ 214 (359)
T 1m6e_X 210 LGRRS 214 (359)
T ss_dssp EECSS
T ss_pred ecCCC
Confidence 88753
No 294
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.35 E-value=2.8e-06 Score=76.97 Aligned_cols=87 Identities=18% Similarity=0.226 Sum_probs=68.5
Q ss_pred cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEec
Q 021975 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (304)
.++.++||+||++|.++..+.+.+. .|++||+.+ +..... ..+++.++++|+.....+.+.||+|+|.
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~--~V~aVD~~~-l~~~l~---------~~~~V~~~~~d~~~~~~~~~~~D~vvsD 277 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNM--WVYSVDNGP-MAQSLM---------DTGQVTWLREDGFKFRPTRSNISWMVCD 277 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC--EEEEECSSC-CCHHHH---------TTTCEEEECSCTTTCCCCSSCEEEEEEC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCC--EEEEEEhhh-cChhhc---------cCCCeEEEeCccccccCCCCCcCEEEEc
Confidence 4689999999999999999999975 999999865 212111 2478999999998887777889999997
Q ss_pred chhccCCCHHHHHHHHHHhcccC
Q 021975 245 AALHCWPSPSNAVAEISRILRSG 267 (304)
Q Consensus 245 ~vl~h~~d~~~~l~~~~r~Lkpg 267 (304)
.+ .+|...++-+.+.|..|
T Consensus 278 m~----~~p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 278 MV----EKPAKVAALMAQWLVNG 296 (375)
T ss_dssp CS----SCHHHHHHHHHHHHHTT
T ss_pred CC----CChHHhHHHHHHHHhcc
Confidence 65 45777777777776665
No 295
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.30 E-value=2.9e-06 Score=74.14 Aligned_cols=119 Identities=13% Similarity=0.113 Sum_probs=73.9
Q ss_pred HHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC
Q 021975 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (304)
Q Consensus 153 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp 232 (304)
++.++... --..++.+|||+||++|.|+..+.+...-..|+|+|+...+...... ... ...++.....+.....
T Consensus 69 KL~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~----~~~~iv~~~~~~di~~ 142 (300)
T 3eld_A 69 KIRWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQT----LGWNIVKFKDKSNVFT 142 (300)
T ss_dssp HHHHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCB----TTGGGEEEECSCCTTT
T ss_pred HHHHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccc----cCCceEEeecCceeee
Confidence 34444444 22346889999999999999999986444578999986532100000 000 0112333333333233
Q ss_pred CCCCccceEEecchhccCCCH-------HHHHHHHHHhcccC-cEEEEEEeCCC
Q 021975 233 FASGFVDAVHAGAALHCWPSP-------SNAVAEISRILRSG-GVFVGTTFLRY 278 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~-------~~~l~~~~r~Lkpg-G~lvi~~~~~~ 278 (304)
+..+.+|+|++...-+ .... ..+|.-+..+|+|| |.|++-.+..+
T Consensus 143 l~~~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~y 195 (300)
T 3eld_A 143 MPTEPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPY 195 (300)
T ss_dssp SCCCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTT
T ss_pred cCCCCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccc
Confidence 4567899999976544 3332 13577778999999 99999888743
No 296
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=98.26 E-value=5.3e-07 Score=58.88 Aligned_cols=45 Identities=24% Similarity=0.522 Sum_probs=38.9
Q ss_pred CCcCCeeeccCCCccccccCCCCccccccccCceeeC--CCCccccCCCCeeeeeccc
Q 021975 55 ELEGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCR--KCDKTYSSKDNYLDLTVIS 110 (304)
Q Consensus 55 ~~~~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~--~C~~~~~~~~g~~~~~~~~ 110 (304)
...+++++||.|+++|.... +.+.|+ .|+..|++++|+++++.+.
T Consensus 5 ~~lL~iL~CP~c~~~L~~~~-----------~~L~C~~~~c~~~YPI~dGIPvlL~~e 51 (56)
T 2kpi_A 5 AGLLEILACPACHAPLEERD-----------AELICTGQDCGLAYPVRDGIPVLLVDE 51 (56)
T ss_dssp CSCTTSCCCSSSCSCEEEET-----------TEEEECSSSCCCEEEEETTEECCCTTT
T ss_pred HHHHhheeCCCCCCcceecC-----------CEEEcCCcCCCcEEeeECCEeeeCHHH
Confidence 34678899999999987744 689999 9999999999999998764
No 297
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.23 E-value=2.7e-06 Score=74.19 Aligned_cols=79 Identities=20% Similarity=0.308 Sum_probs=64.3
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC---
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--- 232 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--- 232 (304)
+.+.+.+...+++.+||.+||.|..+..+++. +.+|+|+|.++.+++.+++ ++. .++.++++++.+++
T Consensus 12 ~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~------~rv~lv~~~f~~l~~~L 82 (285)
T 1wg8_A 12 QEALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL------PGLTVVQGNFRHLKRHL 82 (285)
T ss_dssp HHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC------TTEEEEESCGGGHHHHH
T ss_pred HHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc------CCEEEEECCcchHHHHH
Confidence 34555666667889999999999999999998 3499999999999999998 642 47999999998764
Q ss_pred --CCCCccceEEe
Q 021975 233 --FASGFVDAVHA 243 (304)
Q Consensus 233 --~~~~~fD~V~~ 243 (304)
...++||.|++
T Consensus 83 ~~~g~~~vDgIL~ 95 (285)
T 1wg8_A 83 AALGVERVDGILA 95 (285)
T ss_dssp HHTTCSCEEEEEE
T ss_pred HHcCCCCcCEEEe
Confidence 12257999997
No 298
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.14 E-value=4.5e-06 Score=75.89 Aligned_cols=108 Identities=12% Similarity=0.148 Sum_probs=78.4
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcC-----ccCCCCeEEEEccCCCCC----CCCC
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDN-----TILTSNLALVRADVCRLP----FASG 236 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-----~~~~~~i~~~~~d~~~lp----~~~~ 236 (304)
++++||-||.|.|..++.+.+... .+++.+|+++.+++.+++.+.... ....++++++.+|....- -..+
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 467999999999999999998754 799999999999999999764311 002246889999875421 1246
Q ss_pred ccceEEecchhcc-CCCH---------HHHHHHHHHhcccCcEEEEEE
Q 021975 237 FVDAVHAGAALHC-WPSP---------SNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 237 ~fD~V~~~~vl~h-~~d~---------~~~l~~~~r~LkpgG~lvi~~ 274 (304)
.||+|+....-.. ..+| ..+++.+++.|+|||+++...
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 7999998532111 1122 357889999999999988754
No 299
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.13 E-value=1.9e-05 Score=61.87 Aligned_cols=87 Identities=16% Similarity=0.156 Sum_probs=61.6
Q ss_pred CCeEEEEcCCcc-HHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC--CccceEE
Q 021975 167 GGLLVDVSCGSG-LFSRKFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS--GFVDAVH 242 (304)
Q Consensus 167 ~~~vLDiGcG~G-~~~~~l~~-~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~--~~fD~V~ 242 (304)
+.+|||||||.| ..+..|++ .+. +|+++|+++..+ .+++.|+.+ |..+ +.||+|.
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g~--~V~atDInp~Av------------------~~v~dDiF~-P~~~~Y~~~DLIY 94 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSKV--DLVLTDIKPSHG------------------GIVRDDITS-PRMEIYRGAALIY 94 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSCC--EEEEECSSCSST------------------TEECCCSSS-CCHHHHTTEEEEE
T ss_pred CCcEEEEccCCChHHHHHHHHhCCC--eEEEEECCcccc------------------ceEEccCCC-CcccccCCcCEEE
Confidence 579999999999 59999997 665 999999988532 288899987 3222 3799998
Q ss_pred ecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCCCC
Q 021975 243 AGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYT 279 (304)
Q Consensus 243 ~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~~~ 279 (304)
+..- -++....+.++++.+ |.-+++.......
T Consensus 95 sirP---P~El~~~i~~lA~~v--~adliI~pL~~E~ 126 (153)
T 2k4m_A 95 SIRP---PAEIHSSLMRVADAV--GARLIIKPLTGED 126 (153)
T ss_dssp EESC---CTTTHHHHHHHHHHH--TCEEEEECBTTBC
T ss_pred EcCC---CHHHHHHHHHHHHHc--CCCEEEEcCCCCc
Confidence 7542 123445555555544 4578887776543
No 300
>2k5r_A Uncharacterized protein XF2673; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Xylella fastidiosa TEMECULA1}
Probab=98.11 E-value=1.1e-06 Score=63.74 Aligned_cols=55 Identities=15% Similarity=0.090 Sum_probs=42.9
Q ss_pred CcCCeeeccCCCccccccCC------------------CCccccccccCceeeCCCCccccCCCCeeeeeccc
Q 021975 56 LEGDLFSCPICYEPLIRKGP------------------TGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVIS 110 (304)
Q Consensus 56 ~~~~~l~CP~C~~~l~~~~~------------------~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~~ 110 (304)
..+++|+||.|+++|..... .+....++..+.+.|+.|+..|++++|+++++.+.
T Consensus 4 ~LLdILaCP~cK~pL~l~~~~~~~~~~ca~~~~~~~~~~~~~~~e~~~~~LvC~~c~~~YPI~dGIPvmL~~e 76 (97)
T 2k5r_A 4 KLLHLLCSPDTRQPLSLLESKGLEALNKAIVSGTVQRADGSIQNQSLHEALITRDRKQVFRIEDSIPVLLPEE 76 (97)
T ss_dssp TTCSSCCCCTTSSCCEECCHHHHHHHHHHHHHTCCBCTTSCBCCCCCSEEEECTTSCEEEEEETTEEECCGGG
T ss_pred HHhhheECCCCCCcccccccchhhhhhhhhhccccccccccccccccCCeEEcCCCCCCccccCCCcccChHH
Confidence 35789999999999876432 11233455568899999999999999999999873
No 301
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.98 E-value=1.3e-05 Score=68.65 Aligned_cols=111 Identities=18% Similarity=0.180 Sum_probs=67.2
Q ss_pred HHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccC-CCCe---EEEEc-cCC
Q 021975 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTIL-TSNL---ALVRA-DVC 229 (304)
Q Consensus 155 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~-~~~i---~~~~~-d~~ 229 (304)
.++...+ -..++.+|||+||+.|.|+..+++.-.-..|.|.++.... . ...... ..++ .+.++ |+.
T Consensus 63 ~EIdeK~-likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-------~~P~~~~~~Gv~~i~~~~G~Df~ 133 (269)
T 2px2_A 63 RWLVERR-FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-------EEPMLMQSYGWNIVTMKSGVDVF 133 (269)
T ss_dssp HHHHHTT-SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-------CCCCCCCSTTGGGEEEECSCCGG
T ss_pred HHHHHcC-CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-------cCCCcccCCCceEEEeeccCCcc
Confidence 3444443 4456889999999999999999887211133444443220 0 000000 0233 44446 887
Q ss_pred CCCCCCCccceEEecchhccCCCHH-------HHHHHHHHhcccCc-EEEEEEeCC
Q 021975 230 RLPFASGFVDAVHAGAALHCWPSPS-------NAVAEISRILRSGG-VFVGTTFLR 277 (304)
Q Consensus 230 ~lp~~~~~fD~V~~~~vl~h~~d~~-------~~l~~~~r~LkpgG-~lvi~~~~~ 277 (304)
.++ ...+|+|+|...=. ..++. .+|+-+.++|+||| .|++-.+..
T Consensus 134 ~~~--~~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 134 YKP--SEISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp GSC--CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred CCC--CCCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 753 55799999965432 33221 25666778999999 999988764
No 302
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.98 E-value=5.6e-05 Score=65.83 Aligned_cols=118 Identities=14% Similarity=0.137 Sum_probs=78.3
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEc-cCCCCC
Q 021975 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA-DVCRLP 232 (304)
Q Consensus 154 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~-d~~~lp 232 (304)
+.++... ....++.+|||+||++|.|+...+.......|+|+|+-..-.+.= ...+..+ ..-+.+..+ |+..++
T Consensus 83 L~ei~~~-~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~---w~lV~~~~~~Dv~~l~ 157 (321)
T 3lkz_A 83 LRWLVER-RFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYG---WNIVTMKSGVDVFYRP 157 (321)
T ss_dssp HHHHHHT-TSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTT---GGGEEEECSCCTTSSC
T ss_pred HHHHHHh-cCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcC---CcceEEEeccCHhhCC
Confidence 3444444 334567799999999999999777764345899999965411000 0000111 133778887 877766
Q ss_pred CCCCccceEEecchhccCCCHH-------HHHHHHHHhcccC-cEEEEEEeCCCC
Q 021975 233 FASGFVDAVHAGAALHCWPSPS-------NAVAEISRILRSG-GVFVGTTFLRYT 279 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~-------~~l~~~~r~Lkpg-G~lvi~~~~~~~ 279 (304)
. ..+|+|+|.-. +--+++. .+|+-+.+.|++| |-|++-.+..|.
T Consensus 158 ~--~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~ 209 (321)
T 3lkz_A 158 S--ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYM 209 (321)
T ss_dssp C--CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTS
T ss_pred C--CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCC
Confidence 3 66999999776 7777764 2566667889999 888887776654
No 303
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.94 E-value=3.1e-05 Score=68.55 Aligned_cols=61 Identities=15% Similarity=0.166 Sum_probs=51.6
Q ss_pred CcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc
Q 021975 150 GPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD 213 (304)
Q Consensus 150 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~ 213 (304)
.+.++.+.+..... .++..|||++||+|..+..+.+.+. +++|+|+++.+++.|+++++..
T Consensus 220 ~p~~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g~--~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 220 FPLELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWGR--RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp SCHHHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHh
Confidence 44566666666555 4688999999999999999999876 9999999999999999998764
No 304
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.91 E-value=7.3e-05 Score=63.06 Aligned_cols=117 Identities=17% Similarity=0.152 Sum_probs=76.5
Q ss_pred HHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEc-cCCCCC
Q 021975 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA-DVCRLP 232 (304)
Q Consensus 154 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~-d~~~lp 232 (304)
+.++...+ ...++.+|||+||++|.++...+.......|+|+|+-..-.+.= ...+.. .-..+.|.++ |+..++
T Consensus 67 L~ei~ek~-~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~---gwn~v~fk~gvDv~~~~ 141 (267)
T 3p8z_A 67 LQWFVERN-MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTY---GWNIVKLMSGKDVFYLP 141 (267)
T ss_dssp HHHHHHTT-SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCT---TTTSEEEECSCCGGGCC
T ss_pred HHHHHHhc-CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhc---CcCceEEEeccceeecC
Confidence 34444444 44567899999999999999777764345899999965321000 000111 1256899998 876655
Q ss_pred CCCCccceEEecchhccCCCHH-------HHHHHHHHhcccCcEEEEEEeCCCC
Q 021975 233 FASGFVDAVHAGAALHCWPSPS-------NAVAEISRILRSGGVFVGTTFLRYT 279 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~-------~~l~~~~r~LkpgG~lvi~~~~~~~ 279 (304)
...+|.|+|.-.= .-+++. .+|+-+.+.|++ |-+++-.+..+.
T Consensus 142 --~~~~DtllcDIge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 142 --PEKCDTLLCDIGE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp --CCCCSEEEECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred --CccccEEEEecCC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 3679999996542 334443 255666788998 788887776654
No 305
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.57 E-value=6.3e-05 Score=67.09 Aligned_cols=83 Identities=19% Similarity=0.271 Sum_probs=65.0
Q ss_pred HHHHHhhcccCCCeEEEEcCCccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC--
Q 021975 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-- 232 (304)
Q Consensus 156 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-- 232 (304)
+.+.+.+...+++.++|..||.|..+..+++. ++.++|+|+|.++.+++.++ ++ . ..++.++++++.++.
T Consensus 47 ~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--~----~~Rv~lv~~nF~~l~~~ 119 (347)
T 3tka_A 47 DEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--D----DPRFSIIHGPFSALGEY 119 (347)
T ss_dssp HHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--C----CTTEEEEESCGGGHHHH
T ss_pred HHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--c----CCcEEEEeCCHHHHHHH
Confidence 34555666778899999999999999999987 67789999999999999884 33 1 368999999987753
Q ss_pred CC----CCccceEEecc
Q 021975 233 FA----SGFVDAVHAGA 245 (304)
Q Consensus 233 ~~----~~~fD~V~~~~ 245 (304)
+. .+++|.|++..
T Consensus 120 L~~~g~~~~vDgILfDL 136 (347)
T 3tka_A 120 VAERDLIGKIDGILLDL 136 (347)
T ss_dssp HHHTTCTTCEEEEEEEC
T ss_pred HHhcCCCCcccEEEECC
Confidence 11 13699998843
No 306
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.44 E-value=0.00045 Score=59.80 Aligned_cols=63 Identities=19% Similarity=0.227 Sum_probs=51.2
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcC
Q 021975 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDN 214 (304)
Q Consensus 149 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~ 214 (304)
+.+.++.+.+..... .++..|||..||+|..+....+.+. +++|+|+++..++.++++++..+
T Consensus 196 ~~p~~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~gr--~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 196 PKPRDLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKLGR--NFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp CCCHHHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC--
T ss_pred CCCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhcc
Confidence 445666666665554 4688999999999999999998876 99999999999999999987643
No 307
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.42 E-value=3.1e-05 Score=86.14 Aligned_cols=104 Identities=20% Similarity=0.202 Sum_probs=54.4
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCC-----CCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC-CCCCCccc
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGT-----YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-PFASGFVD 239 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~-----~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p~~~~~fD 239 (304)
+..+|||||.|+|..+..+.+... ..+++-.|+|+...+.++++++... +..-.-|..+. ++..++||
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d------i~~~~~d~~~~~~~~~~~yd 1313 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH------VTQGQWDPANPAPGSLGKAD 1313 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT------EEEECCCSSCCCC-----CC
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc------cccccccccccccCCCCcee
Confidence 456899999999987655544321 2478999999988877777665422 22221233332 33456899
Q ss_pred eEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 240 AVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 240 ~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
+|++..+||-.++....+++++++|||||++++...
T Consensus 1314 lvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1314 LLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp EEEEECC--------------------CCEEEEEEC
T ss_pred EEEEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 999999999888999999999999999999988753
No 308
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.35 E-value=0.0028 Score=56.93 Aligned_cols=120 Identities=13% Similarity=0.157 Sum_probs=86.0
Q ss_pred HHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCcc------------------CC
Q 021975 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI------------------LT 218 (304)
Q Consensus 157 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~------------------~~ 218 (304)
.+.+++...+...|+.+|||.......+...+++..++-+|. |+.++.-++.+...+.. ..
T Consensus 88 ~v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~ 166 (334)
T 1rjd_A 88 AILEFLVANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQ 166 (334)
T ss_dssp HHHHHHHHCSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEEC
T ss_pred HHHHHHHHCCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCC
Confidence 344445444567899999999999988887655668888887 88888888877664200 12
Q ss_pred CCeEEEEccCCCCCC---------CCCccceEEecchhccCCCH--HHHHHHHHHhcccCcEEEEEEeCCC
Q 021975 219 SNLALVRADVCRLPF---------ASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRY 278 (304)
Q Consensus 219 ~~i~~~~~d~~~lp~---------~~~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~lvi~~~~~~ 278 (304)
.+..++.+|+.+... ......++++-.++.+++.. ..+++.+.... |+|.+++.++...
T Consensus 167 ~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~ 236 (334)
T 1rjd_A 167 GRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGG 236 (334)
T ss_dssp SSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCC
T ss_pred CceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCC
Confidence 679999999987421 22456788888999998743 36778787776 7888877776553
No 309
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.34 E-value=0.00081 Score=60.79 Aligned_cols=75 Identities=12% Similarity=0.089 Sum_probs=58.3
Q ss_pred cHHHHHHHHHhhccc------CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEE
Q 021975 151 PDEEFKMAQEYFKSA------QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224 (304)
Q Consensus 151 ~~~~~~~l~~~l~~~------~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~ 224 (304)
.....+.+.+.+... ++..|||||.|.|.++..|.+.....+|+++|+++..+...++.. . ..++.++
T Consensus 37 d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~-----~~~l~ii 110 (353)
T 1i4w_A 37 NPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E-----GSPLQIL 110 (353)
T ss_dssp CHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T-----TSSCEEE
T ss_pred CHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c-----CCCEEEE
Confidence 345556666666543 357899999999999999998732348999999999999998865 2 2589999
Q ss_pred EccCCCC
Q 021975 225 RADVCRL 231 (304)
Q Consensus 225 ~~d~~~l 231 (304)
.+|+.++
T Consensus 111 ~~D~l~~ 117 (353)
T 1i4w_A 111 KRDPYDW 117 (353)
T ss_dssp CSCTTCH
T ss_pred ECCccch
Confidence 9999654
No 310
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.30 E-value=0.00088 Score=58.33 Aligned_cols=99 Identities=9% Similarity=-0.016 Sum_probs=66.5
Q ss_pred cccCCCeEEEEcC------CccHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCC
Q 021975 163 KSAQGGLLVDVSC------GSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (304)
Q Consensus 163 ~~~~~~~vLDiGc------G~G~~~~~l~~~~~~-~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~ 235 (304)
..+.+.+|||+|+ ..|.+ .+++.++. +.++++|+.+-. .... .++++|...... .
T Consensus 106 ~vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~--------------sda~-~~IqGD~~~~~~-~ 167 (344)
T 3r24_A 106 AVPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFV--------------SDAD-STLIGDCATVHT-A 167 (344)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCB--------------CSSS-EEEESCGGGEEE-S
T ss_pred eecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccc--------------cCCC-eEEEcccccccc-C
Confidence 3456899999996 66763 44555664 599999997732 1122 559999765432 4
Q ss_pred CccceEEecchh---ccC--CC-----H-HHHHHHHHHhcccCcEEEEEEeCCCC
Q 021975 236 GFVDAVHAGAAL---HCW--PS-----P-SNAVAEISRILRSGGVFVGTTFLRYT 279 (304)
Q Consensus 236 ~~fD~V~~~~vl---~h~--~d-----~-~~~l~~~~r~LkpgG~lvi~~~~~~~ 279 (304)
+.||+|++...= -+. .. . +.+++-+.+.|+|||.|++-.+....
T Consensus 168 ~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg 222 (344)
T 3r24_A 168 NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 222 (344)
T ss_dssp SCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred CCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC
Confidence 789999995331 111 11 1 34566678899999999999887643
No 311
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=96.69 E-value=0.0012 Score=41.87 Aligned_cols=33 Identities=27% Similarity=0.539 Sum_probs=24.6
Q ss_pred CCeeeccCCCc-cccccCCCCccccccccCceeeCCCCccccC
Q 021975 58 GDLFSCPICYE-PLIRKGPTGLTLGAIYRSGFKCRKCDKTYSS 99 (304)
Q Consensus 58 ~~~l~CP~C~~-~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~ 99 (304)
...+.||.|++ ++..... .+.+.|..||..+..
T Consensus 3 ~~~~~CP~C~~~~l~~d~~---------~gelvC~~CG~v~~e 36 (50)
T 1pft_A 3 NKQKVCPACESAELIYDPE---------RGEIVCAKCGYVIEE 36 (50)
T ss_dssp SSCCSCTTTSCCCEEEETT---------TTEEEESSSCCBCCC
T ss_pred CccEeCcCCCCcceEEcCC---------CCeEECcccCCcccc
Confidence 34678999999 6655432 268999999998743
No 312
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.54 E-value=0.0017 Score=56.62 Aligned_cols=106 Identities=8% Similarity=-0.053 Sum_probs=81.1
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC-CC---CCCCccceE
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LP---FASGFVDAV 241 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp---~~~~~fD~V 241 (304)
.+..+||+=+|+|.++..+.+.+ .+++.+|.++..++..+++++. ..++.++..|... +. -+...||+|
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~~--d~~vfvE~~~~a~~~L~~Nl~~-----~~~~~V~~~D~~~~L~~l~~~~~~fdLV 163 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRSQ--DRLYLCELHPTEYNFLLKLPHF-----NKKVYVNHTDGVSKLNALLPPPEKRGLI 163 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCTT--SEEEEECCSHHHHHHHTTSCCT-----TSCEEEECSCHHHHHHHHCSCTTSCEEE
T ss_pred cCCCceeEeCCcHHHHHHHcCCC--CeEEEEeCCHHHHHHHHHHhCc-----CCcEEEEeCcHHHHHHHhcCCCCCccEE
Confidence 35678999999999999999855 4999999999999999988764 2579999999633 21 224579999
Q ss_pred EecchhccCCCHHHHHHHHHH--hcccCcEEEEEEeCCC
Q 021975 242 HAGAALHCWPSPSNAVAEISR--ILRSGGVFVGTTFLRY 278 (304)
Q Consensus 242 ~~~~vl~h~~d~~~~l~~~~r--~LkpgG~lvi~~~~~~ 278 (304)
++.--.+.-.+...+++.+.+ .+.++|+++++-+.-.
T Consensus 164 fiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~ 202 (283)
T 2oo3_A 164 FIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVN 202 (283)
T ss_dssp EECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESS
T ss_pred EECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccc
Confidence 997665543455666666665 5678999999887653
No 313
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.52 E-value=0.053 Score=47.98 Aligned_cols=108 Identities=17% Similarity=0.085 Sum_probs=78.0
Q ss_pred CCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC---------CCCCc
Q 021975 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---------FASGF 237 (304)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---------~~~~~ 237 (304)
...|+++|||-=.....+.. .....++-+| .|..++..++.+...+.....+..++.+|+.+ . +....
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~-~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~ 179 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDW-PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSA 179 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCC-CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTS
T ss_pred CCeEEEeCCCCCchhhhccC-CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCC
Confidence 35799999998776555542 2236899999 69999999999875442234678999999976 2 11223
Q ss_pred cceEEecchhccCCCH--HHHHHHHHHhcccCcEEEEEEeCC
Q 021975 238 VDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 238 fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
-=++++-.+++|+++. ..+++.+...+.||+.+++.....
T Consensus 180 Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 180 RTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp CEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred CEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 3467778899999753 468888888888988888776543
No 314
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.31 E-value=0.033 Score=50.85 Aligned_cols=104 Identities=13% Similarity=0.134 Sum_probs=70.0
Q ss_pred hcccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC-CC------C
Q 021975 162 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LP------F 233 (304)
Q Consensus 162 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp------~ 233 (304)
....++.+||-+|+|. |.+..++++.....+|+++|.+++.++.+++. ....+...-.+ +. .
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l----------Ga~~i~~~~~~~~~~~v~~~t 250 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ----------GFEIADLSLDTPLHEQIAALL 250 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----------TCEEEETTSSSCHHHHHHHHH
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc----------CCcEEccCCcchHHHHHHHHh
Confidence 3456788999999876 88888888874223799999999988888761 22333221111 00 0
Q ss_pred CCCccceEEecchh---------ccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 234 ASGFVDAVHAGAAL---------HCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 234 ~~~~fD~V~~~~vl---------~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
....+|+|+-.-.- .|.+++...+++..+.|++||++++...
T Consensus 251 ~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 251 GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 12369999875432 2344566789999999999999887653
No 315
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.18 E-value=0.016 Score=53.02 Aligned_cols=105 Identities=14% Similarity=0.119 Sum_probs=67.9
Q ss_pred hhcccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC-C------
Q 021975 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-P------ 232 (304)
Q Consensus 161 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p------ 232 (304)
.....++.+||-+|+|. |.+...+++.....+|+++|.+++.++.+++ .+ ...+...-.+. .
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lG------a~~i~~~~~~~~~~~~~~~ 249 (398)
T 2dph_A 180 SAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AG------FETIDLRNSAPLRDQIDQI 249 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TT------CEEEETTSSSCHHHHHHHH
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cC------CcEEcCCCcchHHHHHHHH
Confidence 34556788999999987 8888888876322389999999998887765 12 23332221111 0
Q ss_pred CCCCccceEEecchhccC--------CCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 233 FASGFVDAVHAGAALHCW--------PSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~--------~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
.....+|+|+..-.-... .++...+++..+.|++||++++...
T Consensus 250 ~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 250 LGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp HSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred hCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 012269999875432210 0233568999999999999886543
No 316
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.16 E-value=0.014 Score=53.74 Aligned_cols=62 Identities=11% Similarity=0.136 Sum_probs=48.7
Q ss_pred cCCCeEEEEcCCccHHHHHHH-HhCC-CCeEEEEeCCHHHHHHHHHHHHh--cCccCC-CCeEEEEccC
Q 021975 165 AQGGLLVDVSCGSGLFSRKFA-KSGT-YSGVVALDFSENMLRQCYDFIKQ--DNTILT-SNLALVRADV 228 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~~~~~l~-~~~~-~~~v~giD~s~~~~~~a~~~~~~--~~~~~~-~~i~~~~~d~ 228 (304)
.++.+++|||++.|.++..++ +.++ ..+|+++|+++...+..+++++. ++ .. .++.++..-+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~--~~~~~v~~~~~al 291 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDT--NFASRITVHGCGA 291 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTS--TTGGGEEEECSEE
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhcc--CCCCCEEEEEeEE
Confidence 568899999999999999887 4443 36999999999999999999987 22 12 4666665444
No 317
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.74 E-value=0.053 Score=48.95 Aligned_cols=101 Identities=17% Similarity=0.121 Sum_probs=66.3
Q ss_pred hhcccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC-----CCC
Q 021975 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-----PFA 234 (304)
Q Consensus 161 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-----p~~ 234 (304)
.....++.+||-+|+|. |.+...+++.....+|+++|.+++.++.+++. + .. .++...-.++ ...
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----G----a~-~vi~~~~~~~~~~~~~~~ 255 (371)
T 1f8f_A 185 ALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----G----AT-HVINSKTQDPVAAIKEIT 255 (371)
T ss_dssp TTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----T----CS-EEEETTTSCHHHHHHHHT
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----C----CC-EEecCCccCHHHHHHHhc
Confidence 34456788999999986 88888888763223699999999988888763 1 11 1222211111 011
Q ss_pred CCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
.+.+|+|+..-. . ...+++..+.|+++|++++....
T Consensus 256 ~gg~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~~ 291 (371)
T 1f8f_A 256 DGGVNFALESTG-----S-PEILKQGVDALGILGKIAVVGAP 291 (371)
T ss_dssp TSCEEEEEECSC-----C-HHHHHHHHHTEEEEEEEEECCCC
T ss_pred CCCCcEEEECCC-----C-HHHHHHHHHHHhcCCEEEEeCCC
Confidence 236899886432 2 34688999999999999876543
No 318
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.62 E-value=0.051 Score=49.41 Aligned_cols=70 Identities=19% Similarity=0.177 Sum_probs=55.7
Q ss_pred CeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC--------CCCccc
Q 021975 168 GLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--------ASGFVD 239 (304)
Q Consensus 168 ~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~--------~~~~fD 239 (304)
.+++|+-||.|.++..+...|. ..+.++|+++.+++..+.++ ++..++++|+.++.. ....+|
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~-~~v~avE~d~~a~~t~~~N~--------~~~~~~~~DI~~~~~~~~~~~~~~~~~~D 73 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGF-DVKMAVEIDQHAINTHAINF--------PRSLHVQEDVSLLNAEIIKGFFKNDMPID 73 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTC-EEEEEECSCHHHHHHHHHHC--------TTSEEECCCGGGCCHHHHHHHHCSCCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCC-cEEEEEeCCHHHHHHHHHhC--------CCCceEecChhhcCHHHHHhhcccCCCee
Confidence 4799999999999999999884 35679999999988888753 456788899877631 245799
Q ss_pred eEEecch
Q 021975 240 AVHAGAA 246 (304)
Q Consensus 240 ~V~~~~v 246 (304)
+|+...-
T Consensus 74 ~i~ggpP 80 (376)
T 3g7u_A 74 GIIGGPP 80 (376)
T ss_dssp EEEECCC
T ss_pred EEEecCC
Confidence 9998654
No 319
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.60 E-value=0.046 Score=46.97 Aligned_cols=107 Identities=16% Similarity=0.186 Sum_probs=71.1
Q ss_pred CCeEEEEcCCccHHHHHHHHh-------CCCCeEEEEe-----CCHH-------------------HHHHHHHHH-----
Q 021975 167 GGLLVDVSCGSGLFSRKFAKS-------GTYSGVVALD-----FSEN-------------------MLRQCYDFI----- 210 (304)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~-------~~~~~v~giD-----~s~~-------------------~~~~a~~~~----- 210 (304)
.+.|+|+|+-.|..+..++.. ++..+++|+| +.+. ..+..++.+
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 569999999999987776542 3567999999 3320 111122211
Q ss_pred -HhcCccCCCCeEEEEccCCC-CC-----CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 211 -KQDNTILTSNLALVRADVCR-LP-----FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 211 -~~~~~~~~~~i~~~~~d~~~-lp-----~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+..+. ...++.++.+++.+ +| .+..+||+|+...-. ...-...++.+...|+|||++++-++.
T Consensus 150 ~~~~g~-~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 150 SDFFGH-VTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp TSTTTT-SCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhcCC-CCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 12221 13789999999965 22 235579999987632 122345788999999999999998875
No 320
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.52 E-value=0.031 Score=49.75 Aligned_cols=63 Identities=11% Similarity=0.087 Sum_probs=50.8
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcC
Q 021975 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDN 214 (304)
Q Consensus 149 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~ 214 (304)
+.+.++.+.+..... .++..|||.-||+|..+.+..+.+. +++|+|+++..++.++++++..+
T Consensus 236 ~kp~~l~~~~i~~~~-~~~~~VlDpF~GsGtt~~aa~~~gr--~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 236 RFPAKLPEFFIRMLT-EPDDLVVDIFGGSNTTGLVAERESR--KWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp CCCTHHHHHHHHHHC-CTTCEEEETTCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHGGGSCSC
T ss_pred cCCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--CEEEEeCCHHHHHHHHHHHHhcc
Confidence 344566666665543 4688999999999999999988876 99999999999999999876543
No 321
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.48 E-value=0.045 Score=44.57 Aligned_cols=94 Identities=20% Similarity=0.139 Sum_probs=60.6
Q ss_pred hcccCCCeEEEEcC--CccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC------
Q 021975 162 FKSAQGGLLVDVSC--GSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------ 232 (304)
Q Consensus 162 l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------ 232 (304)
....++.+||.+|+ |.|.....++.. |. +|+++|.+++..+.+++ .+ ... .+ |..+..
T Consensus 34 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~--~V~~~~~~~~~~~~~~~----~g----~~~-~~--d~~~~~~~~~~~ 100 (198)
T 1pqw_A 34 GRLSPGERVLIHSATGGVGMAAVSIAKMIGA--RIYTTAGSDAKREMLSR----LG----VEY-VG--DSRSVDFADEIL 100 (198)
T ss_dssp SCCCTTCEEEETTTTSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHT----TC----CSE-EE--ETTCSTHHHHHH
T ss_pred hCCCCCCEEEEeeCCChHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH----cC----CCE-Ee--eCCcHHHHHHHH
Confidence 34456889999995 456665555554 65 99999999887766644 12 111 12 322211
Q ss_pred --CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 233 --FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 233 --~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
.....+|+|+.... ...+++..+.|++||+++....
T Consensus 101 ~~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 101 ELTDGYGVDVVLNSLA-------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp HHTTTCCEEEEEECCC-------THHHHHHHHTEEEEEEEEECSC
T ss_pred HHhCCCCCeEEEECCc-------hHHHHHHHHHhccCCEEEEEcC
Confidence 11236999986542 2468889999999999887654
No 322
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.45 E-value=0.055 Score=48.36 Aligned_cols=94 Identities=14% Similarity=0.125 Sum_probs=64.9
Q ss_pred cccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceE
Q 021975 163 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 241 (304)
Q Consensus 163 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V 241 (304)
...++.+||-+|+|. |.+...+++.. +.+|+++|.+++..+.+++. + ....+ .+...+ . ..+|+|
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l----G----a~~v~--~~~~~~--~-~~~D~v 238 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSM----G----VKHFY--TDPKQC--K-EELDFI 238 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHT----T----CSEEE--SSGGGC--C-SCEEEE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhc----C----CCeec--CCHHHH--h-cCCCEE
Confidence 556788999999986 77888888764 34999999999888888762 1 22222 332222 2 279999
Q ss_pred EecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 242 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 242 ~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+..-.-. ..+....+.|+++|++++....
T Consensus 239 id~~g~~------~~~~~~~~~l~~~G~iv~~G~~ 267 (348)
T 3two_A 239 ISTIPTH------YDLKDYLKLLTYNGDLALVGLP 267 (348)
T ss_dssp EECCCSC------CCHHHHHTTEEEEEEEEECCCC
T ss_pred EECCCcH------HHHHHHHHHHhcCCEEEEECCC
Confidence 8643211 2477888999999999987543
No 323
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.38 E-value=0.044 Score=48.66 Aligned_cols=62 Identities=18% Similarity=0.324 Sum_probs=49.3
Q ss_pred CCcHHHHHHHHHhhcccCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCH---HHHHHHHHHHHhc
Q 021975 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSE---NMLRQCYDFIKQD 213 (304)
Q Consensus 149 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~---~~~~~a~~~~~~~ 213 (304)
+.+.++.+.+..... .++..|||.-||+|..+.+..+.+. +++|+|+++ ..++.++++++..
T Consensus 226 ~kp~~l~~~~i~~~~-~~~~~vlDpF~GsGtt~~aa~~~~r--~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 226 QKPAAVIERLVRALS-HPGSTVLDFFAGSGVTARVAIQEGR--NSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp CCCHHHHHHHHHHHS-CTTCEEEETTCTTCHHHHHHHHHTC--EEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCCHHHHHHHHHHhC-CCCCEEEecCCCCCHHHHHHHHcCC--cEEEEECCccHHHHHHHHHHHHHHc
Confidence 345666666665554 4688999999999999999999886 999999999 9999999987543
No 324
>3q87_A Putative uncharacterized protein ECU08_1170; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=95.31 E-value=0.005 Score=46.57 Aligned_cols=29 Identities=14% Similarity=0.362 Sum_probs=25.1
Q ss_pred cccccCceeeCCCCccccCCCCeeeeecc
Q 021975 81 GAIYRSGFKCRKCDKTYSSKDNYLDLTVI 109 (304)
Q Consensus 81 ~~i~~~~l~C~~C~~~~~~~~g~~~~~~~ 109 (304)
-.+.+|.+.|+.||+.|++++|+++++..
T Consensus 93 ~~V~EG~L~Cp~cgr~ypI~~GIPNm~~~ 121 (125)
T 3q87_A 93 IDVVEGSLRCDMCGLIYPIKGSIVETVDT 121 (125)
T ss_dssp EEEEEEEEEETTTCCEEEEETTEEECSSC
T ss_pred eEEEEEEEECCCCCCEeeccCCcccHHHh
Confidence 34567899999999999999999998754
No 325
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.08 E-value=0.11 Score=46.45 Aligned_cols=99 Identities=15% Similarity=0.143 Sum_probs=64.9
Q ss_pred hcccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEcc---CCC----CC-
Q 021975 162 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD---VCR----LP- 232 (304)
Q Consensus 162 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d---~~~----lp- 232 (304)
....++.+||-+|+|. |.+...+++.....+|+++|.++...+.+++. + .. .++..+ ..+ +.
T Consensus 167 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----G----a~-~vi~~~~~~~~~~~~~i~~ 237 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI----G----AD-LVLQISKESPQEIARKVEG 237 (356)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----T----CS-EEEECSSCCHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----C----CC-EEEcCcccccchHHHHHHH
Confidence 4456788999999986 78888888764223899999999888888752 1 21 222211 000 00
Q ss_pred CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
...+.+|+|+..-. . ...++...+.|++||+++....
T Consensus 238 ~~~~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 238 QLGCKPEVTIECTG-----A-EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp HHTSCCSEEEECSC-----C-HHHHHHHHHHSCTTCEEEECSC
T ss_pred HhCCCCCEEEECCC-----C-hHHHHHHHHHhcCCCEEEEEec
Confidence 00146899886432 2 2457888999999999987654
No 326
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.05 E-value=0.017 Score=51.97 Aligned_cols=71 Identities=13% Similarity=0.085 Sum_probs=54.9
Q ss_pred CeEEEEcCCccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC---CCCCccceEEe
Q 021975 168 GLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---FASGFVDAVHA 243 (304)
Q Consensus 168 ~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---~~~~~fD~V~~ 243 (304)
.+++|+-||.|.+...+...|. ...++++|+++.+++..+.++ .+..++.+|+.++. ++...+|+|+.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~--------~~~~~~~~Di~~~~~~~~~~~~~D~l~~ 74 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNF--------PHTQLLAKTIEGITLEEFDRLSFDMILM 74 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC--------TTSCEECSCGGGCCHHHHHHHCCSEEEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhc--------cccccccCCHHHccHhHcCcCCcCEEEE
Confidence 5799999999999999999873 136899999999999998865 33457788887764 11125899998
Q ss_pred cch
Q 021975 244 GAA 246 (304)
Q Consensus 244 ~~v 246 (304)
..-
T Consensus 75 gpP 77 (343)
T 1g55_A 75 SPP 77 (343)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
No 327
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.04 E-value=0.23 Score=44.28 Aligned_cols=98 Identities=16% Similarity=0.123 Sum_probs=64.2
Q ss_pred hcccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccC-CCCC------C
Q 021975 162 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV-CRLP------F 233 (304)
Q Consensus 162 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~-~~lp------~ 233 (304)
....++.+||-+|+|. |.+...+++.. +.+|+++|.+++..+.+++. + .. .++..+- .+.. .
T Consensus 164 ~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l----G----a~-~~~~~~~~~~~~~~i~~~~ 233 (352)
T 1e3j_A 164 AGVQLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNC----G----AD-VTLVVDPAKEEESSIIERI 233 (352)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT----T----CS-EEEECCTTTSCHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHh----C----CC-EEEcCcccccHHHHHHHHh
Confidence 3456788999999875 77777777763 33799999999988888752 2 22 2222110 1110 0
Q ss_pred C---CCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 234 A---SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 234 ~---~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
. ...+|+|+..-. . ...++...+.|+++|+++....
T Consensus 234 ~~~~g~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 234 RSAIGDLPNVTIDCSG-----N-EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp HHHSSSCCSEEEECSC-----C-HHHHHHHHHHSCTTCEEEECSC
T ss_pred ccccCCCCCEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEec
Confidence 1 246899886432 2 3457888999999999987654
No 328
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.95 E-value=0.12 Score=45.81 Aligned_cols=94 Identities=12% Similarity=0.020 Sum_probs=61.7
Q ss_pred hcccCCCeEEEEcC--CccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC-CC-----
Q 021975 162 FKSAQGGLLVDVSC--GSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LP----- 232 (304)
Q Consensus 162 l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp----- 232 (304)
....++.+||-.|+ |.|.....+++. |. +|+++|.+++.++.+++ + + ... .+ |..+ ..
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~--~V~~~~~~~~~~~~~~~-~---g----~~~-~~--d~~~~~~~~~~~ 207 (333)
T 1v3u_A 141 CGVKGGETVLVSAAAGAVGSVVGQIAKLKGC--KVVGAAGSDEKIAYLKQ-I---G----FDA-AF--NYKTVNSLEEAL 207 (333)
T ss_dssp SCCCSSCEEEEESTTBHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH-T---T----CSE-EE--ETTSCSCHHHHH
T ss_pred hCCCCCCEEEEecCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHh-c---C----CcE-EE--ecCCHHHHHHHH
Confidence 34556889999998 456666666654 54 99999999988877743 1 1 111 11 3322 11
Q ss_pred --CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 233 --FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 233 --~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
...+.+|+|+....- ..+.+..+.|++||++++...
T Consensus 208 ~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 208 KKASPDGYDCYFDNVGG-------EFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp HHHCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEECCC
T ss_pred HHHhCCCCeEEEECCCh-------HHHHHHHHHHhcCCEEEEEec
Confidence 112469998876531 347888999999999887653
No 329
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.79 E-value=0.17 Score=45.59 Aligned_cols=101 Identities=20% Similarity=0.224 Sum_probs=66.8
Q ss_pred hhcccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC-----C--
Q 021975 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-----P-- 232 (304)
Q Consensus 161 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-----p-- 232 (304)
.....++.+||-+|+|. |.++..+++.....+|+++|.++...+.+++. + .. .++...-.++ .
T Consensus 177 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----G----a~-~vi~~~~~~~~~~i~~~~ 247 (370)
T 4ej6_A 177 LSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----G----AT-ATVDPSAGDVVEAIAGPV 247 (370)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----T----CS-EEECTTSSCHHHHHHSTT
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----C----CC-EEECCCCcCHHHHHHhhh
Confidence 34456788999999976 77788888774234899999999988888763 1 11 1221111110 0
Q ss_pred -CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 233 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 233 -~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
...+.+|+|+-.- .. ...++++.+.|++||++++....
T Consensus 248 ~~~~gg~Dvvid~~-----G~-~~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 248 GLVPGGVDVVIECA-----GV-AETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp SSSTTCEEEEEECS-----CC-HHHHHHHHHHEEEEEEEEECSCC
T ss_pred hccCCCCCEEEECC-----CC-HHHHHHHHHHhccCCEEEEEecc
Confidence 1234799998643 12 34688999999999999886543
No 330
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.70 E-value=0.091 Score=47.28 Aligned_cols=100 Identities=14% Similarity=0.097 Sum_probs=66.4
Q ss_pred hhcccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC------C
Q 021975 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------F 233 (304)
Q Consensus 161 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~ 233 (304)
.....++.+||-+|+|. |.....+++.. +.+|+++|.+++.++.+++. + .. .++..+..++. .
T Consensus 184 ~~~~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l----G----a~-~vi~~~~~~~~~~v~~~~ 253 (363)
T 3uog_A 184 KGHLRAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFAL----G----AD-HGINRLEEDWVERVYALT 253 (363)
T ss_dssp TTCCCTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH----T----CS-EEEETTTSCHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHc----C----CC-EEEcCCcccHHHHHHHHh
Confidence 34456788999999876 77777777763 34999999999988887662 1 11 22222211110 1
Q ss_pred CCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
....+|+|+..-. ...+....+.|++||++++.....
T Consensus 254 ~g~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~G~~~ 290 (363)
T 3uog_A 254 GDRGADHILEIAG-------GAGLGQSLKAVAPDGRISVIGVLE 290 (363)
T ss_dssp TTCCEEEEEEETT-------SSCHHHHHHHEEEEEEEEEECCCS
T ss_pred CCCCceEEEECCC-------hHHHHHHHHHhhcCCEEEEEecCC
Confidence 1336999987543 124778889999999998876543
No 331
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.68 E-value=0.08 Score=47.09 Aligned_cols=98 Identities=18% Similarity=0.229 Sum_probs=65.1
Q ss_pred hcccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC--C--CCC
Q 021975 162 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--F--ASG 236 (304)
Q Consensus 162 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--~--~~~ 236 (304)
....++.+||-+|+|. |.....+++.. +.+|+++|.+++..+.+++. + ... ++...-.+.. + ..+
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l----G----a~~-~i~~~~~~~~~~~~~~~g 231 (340)
T 3s2e_A 162 TDTRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRL----G----AEV-AVNARDTDPAAWLQKEIG 231 (340)
T ss_dssp TTCCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT----T----CSE-EEETTTSCHHHHHHHHHS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHc----C----CCE-EEeCCCcCHHHHHHHhCC
Confidence 3456788999999986 88888888864 34999999999998888762 1 221 2221111110 0 013
Q ss_pred ccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 237 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
.+|+|+.... -...++.+.+.|+++|++++...
T Consensus 232 ~~d~vid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 232 GAHGVLVTAV------SPKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp SEEEEEESSC------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCEEEEeCC------CHHHHHHHHHHhccCCEEEEeCC
Confidence 5888876421 13468899999999999987654
No 332
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.62 E-value=0.19 Score=45.17 Aligned_cols=92 Identities=16% Similarity=0.181 Sum_probs=61.7
Q ss_pred CCCeEEEEc-CC-ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC-----CCCCCcc
Q 021975 166 QGGLLVDVS-CG-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-----PFASGFV 238 (304)
Q Consensus 166 ~~~~vLDiG-cG-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-----p~~~~~f 238 (304)
++.+||-+| +| .|.+...+++.....+|+++|.+++.++.+++. + .. .++... .++ ....+.+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l----G----ad-~vi~~~-~~~~~~v~~~~~~g~ 240 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL----G----AH-HVIDHS-KPLAAEVAALGLGAP 240 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT----T----CS-EEECTT-SCHHHHHHTTCSCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc----C----CC-EEEeCC-CCHHHHHHHhcCCCc
Confidence 577899998 55 488888888862245999999999888888762 1 11 112111 111 0123579
Q ss_pred ceEEecchhccCCCHHHHHHHHHHhcccCcEEEEE
Q 021975 239 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGT 273 (304)
Q Consensus 239 D~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~ 273 (304)
|+|+..-. -...++++.+.|+++|++++.
T Consensus 241 Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 241 AFVFSTTH------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEECSC------HHHHHHHHHHHSCTTCEEEEC
T ss_pred eEEEECCC------chhhHHHHHHHhcCCCEEEEE
Confidence 98886432 234688999999999999876
No 333
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.46 E-value=0.19 Score=44.87 Aligned_cols=102 Identities=14% Similarity=0.181 Sum_probs=67.1
Q ss_pred HhhcccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC------
Q 021975 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------ 232 (304)
Q Consensus 160 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------ 232 (304)
......++.+||-+|+|. |.+...+++.....+|+++|.+++.++.+++. + .. .++..+-.++.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----G----a~-~vi~~~~~~~~~~v~~~ 230 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY----G----AT-DIINYKNGDIVEQILKA 230 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH----T----CC-EEECGGGSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh----C----Cc-eEEcCCCcCHHHHHHHH
Confidence 344556788999999886 77888888774223899999999988888773 1 11 12221111110
Q ss_pred CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
.....+|+|+..-. . ...+++..+.|++||+++.....
T Consensus 231 t~g~g~D~v~d~~g-----~-~~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 231 TDGKGVDKVVIAGG-----D-VHTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp TTTCCEEEEEECSS-----C-TTHHHHHHHHEEEEEEEEECCCC
T ss_pred cCCCCCCEEEECCC-----C-hHHHHHHHHHHhcCCEEEEeccc
Confidence 11336999986432 2 23588899999999999876544
No 334
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=94.45 E-value=0.023 Score=37.00 Aligned_cols=31 Identities=16% Similarity=0.304 Sum_probs=21.9
Q ss_pred CCeeeccCCCc-cccccCCCCccccccccCceeeCCCCccc
Q 021975 58 GDLFSCPICYE-PLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (304)
Q Consensus 58 ~~~l~CP~C~~-~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (304)
+..+.||.|++ ++.... ..+.+.|..||.++
T Consensus 9 l~~~~Cp~C~~~~lv~D~---------~~ge~vC~~CGlVl 40 (58)
T 1dl6_A 9 LPRVTCPNHPDAILVEDY---------RAGDMICPECGLVV 40 (58)
T ss_dssp CSCCSBTTBSSSCCEECS---------SSCCEECTTTCCEE
T ss_pred cccccCcCCCCCceeEeC---------CCCeEEeCCCCCEE
Confidence 34568999998 443322 23789999999876
No 335
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.43 E-value=0.39 Score=42.94 Aligned_cols=102 Identities=14% Similarity=0.103 Sum_probs=67.1
Q ss_pred hhcccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCC---CC-----
Q 021975 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC---RL----- 231 (304)
Q Consensus 161 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~---~l----- 231 (304)
.....++.+||-+|+|. |.+..++++......|+++|.+++..+.+++. . ..+.....+.. ++
T Consensus 174 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~-------~~~~~~~~~~~~~~~~~~~v~ 245 (363)
T 3m6i_A 174 RAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-C-------PEVVTHKVERLSAEESAKKIV 245 (363)
T ss_dssp HHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-C-------TTCEEEECCSCCHHHHHHHHH
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-c-------hhcccccccccchHHHHHHHH
Confidence 34456788999999976 77888888774222499999999999998874 2 12222221110 00
Q ss_pred -CCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 232 -PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 232 -p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
......+|+|+-.-. . ...+....+.|++||++++....
T Consensus 246 ~~t~g~g~Dvvid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 246 ESFGGIEPAVALECTG-----V-ESSIAAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp HHTSSCCCSEEEECSC-----C-HHHHHHHHHHSCTTCEEEECCCC
T ss_pred HHhCCCCCCEEEECCC-----C-hHHHHHHHHHhcCCCEEEEEccC
Confidence 012346899887432 2 24578899999999999887543
No 336
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.43 E-value=0.13 Score=45.74 Aligned_cols=102 Identities=12% Similarity=0.120 Sum_probs=69.2
Q ss_pred CCeEEEEcCCccHHHHHHHHhCC-CCeE-EEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC---CCCCccceE
Q 021975 167 GGLLVDVSCGSGLFSRKFAKSGT-YSGV-VALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---FASGFVDAV 241 (304)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~~-~~~v-~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---~~~~~fD~V 241 (304)
..+++|+-||.|.+...+.+.|. ...+ .++|+++.+++..+.++.. . ++.+|+.++. ++...+|++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~--------~-~~~~DI~~~~~~~i~~~~~Dil 80 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE--------E-VQVKNLDSISIKQIESLNCNTW 80 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC--------C-CBCCCTTTCCHHHHHHTCCCEE
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC--------C-cccCChhhcCHHHhccCCCCEE
Confidence 45899999999999999999873 2356 7999999999888887531 1 5678887764 222368999
Q ss_pred EecchhccC-----------CCHH-HHHHHHHH-hccc---CcEEEEEEeCC
Q 021975 242 HAGAALHCW-----------PSPS-NAVAEISR-ILRS---GGVFVGTTFLR 277 (304)
Q Consensus 242 ~~~~vl~h~-----------~d~~-~~l~~~~r-~Lkp---gG~lvi~~~~~ 277 (304)
+...-...+ .|+. .++.++.+ +++. .-.+++.+...
T Consensus 81 ~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~ 132 (327)
T 3qv2_A 81 FMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVP 132 (327)
T ss_dssp EECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECG
T ss_pred EecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchh
Confidence 986443333 3444 46666666 5542 12455655554
No 337
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=94.43 E-value=0.086 Score=46.42 Aligned_cols=106 Identities=13% Similarity=0.107 Sum_probs=61.2
Q ss_pred CCCeEEEEcCCccHHHHHH----HHhCCCC--eEEEEeCCH--------H-HHHHHHHHHHhcCcc--CCCCeEEEEccC
Q 021975 166 QGGLLVDVSCGSGLFSRKF----AKSGTYS--GVVALDFSE--------N-MLRQCYDFIKQDNTI--LTSNLALVRADV 228 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l----~~~~~~~--~v~giD~s~--------~-~~~~a~~~~~~~~~~--~~~~i~~~~~d~ 228 (304)
+.-+|||+|-|+|...... .+..+.. .++.+|..+ . ..+..+......... ....+.+..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 3458999999999864322 2335443 456666421 1 111122222211100 123456778887
Q ss_pred CC-CC-CCCCccceEEecchhccCCCH----HHHHHHHHHhcccCcEEEE
Q 021975 229 CR-LP-FASGFVDAVHAGAALHCWPSP----SNAVAEISRILRSGGVFVG 272 (304)
Q Consensus 229 ~~-lp-~~~~~fD~V~~~~vl~h~~d~----~~~l~~~~r~LkpgG~lvi 272 (304)
.. ++ +.+..||+|+... +---.+| ..++++++++++|||+|+-
T Consensus 176 ~~~l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp HHHGGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEEE
Confidence 54 33 3455799999854 2222355 3799999999999998763
No 338
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.38 E-value=0.08 Score=47.85 Aligned_cols=94 Identities=17% Similarity=0.189 Sum_probs=62.6
Q ss_pred cccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEcc----CCCCCCCCCc
Q 021975 163 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD----VCRLPFASGF 237 (304)
Q Consensus 163 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d----~~~lp~~~~~ 237 (304)
...++.+||-+|+|. |.+...+++.. +.+|+++|.+++.++.+++. + .. .++... ...+ . +.
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~l----G----a~-~vi~~~~~~~~~~~--~-~g 257 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKAL----G----AD-EVVNSRNADEMAAH--L-KS 257 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH----T----CS-EEEETTCHHHHHTT--T-TC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----C----Cc-EEeccccHHHHHHh--h-cC
Confidence 455788999999985 77777777763 34899999999888888762 1 11 122111 1111 1 46
Q ss_pred cceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 238 VDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 238 fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
+|+|+..-.-. ..+++..+.|+++|+++....
T Consensus 258 ~Dvvid~~g~~------~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 258 FDFILNTVAAP------HNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp EEEEEECCSSC------CCHHHHHTTEEEEEEEEECCC
T ss_pred CCEEEECCCCH------HHHHHHHHHhccCCEEEEecc
Confidence 99988653211 236778899999999887543
No 339
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.17 E-value=0.066 Score=47.12 Aligned_cols=93 Identities=10% Similarity=0.031 Sum_probs=60.5
Q ss_pred HhhcccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCcc
Q 021975 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFV 238 (304)
Q Consensus 160 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~f 238 (304)
......++.+||-+|+|. |.+...+++.. +.+|++++ +++..+.+++. + ...+..|...+ .+.+
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~l----G------a~~v~~d~~~v---~~g~ 200 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAKR----G------VRHLYREPSQV---TQKY 200 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHHH----T------EEEEESSGGGC---CSCE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHHc----C------CCEEEcCHHHh---CCCc
Confidence 344556789999999974 77878887763 23999999 88888888762 1 22222232222 5679
Q ss_pred ceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEE
Q 021975 239 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 239 D~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
|+|+-.-. .+ .+.+..+.|+++|+++...
T Consensus 201 Dvv~d~~g-----~~--~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 201 FAIFDAVN-----SQ--NAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp EEEECC--------------TTGGGEEEEEEEEEEC
T ss_pred cEEEECCC-----ch--hHHHHHHHhcCCCEEEEEe
Confidence 99886432 11 2356788999999988873
No 340
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.08 E-value=0.18 Score=44.91 Aligned_cols=98 Identities=12% Similarity=0.164 Sum_probs=65.4
Q ss_pred cccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC------CCC
Q 021975 163 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------FAS 235 (304)
Q Consensus 163 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~~~ 235 (304)
...++.+||-+|+|. |.+...+++.....+|+++|.+++..+.+++. + ... ++..+ .+.. ...
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l----G----a~~-~i~~~-~~~~~~v~~~t~g 237 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV----G----ADA-AVKSG-AGAADAIRELTGG 237 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT----T----CSE-EEECS-TTHHHHHHHHHGG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----C----CCE-EEcCC-CcHHHHHHHHhCC
Confidence 445688999999976 77888888763245999999999998888762 1 221 22211 1110 012
Q ss_pred CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
..+|+|+-.- .. ...++...+.|+++|++++....
T Consensus 238 ~g~d~v~d~~-----G~-~~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 238 QGATAVFDFV-----GA-QSTIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp GCEEEEEESS-----CC-HHHHHHHHHHEEEEEEEEECSCC
T ss_pred CCCeEEEECC-----CC-HHHHHHHHHHHhcCCEEEEECCC
Confidence 3688888643 22 34688999999999999887543
No 341
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=93.98 E-value=0.27 Score=43.94 Aligned_cols=90 Identities=13% Similarity=0.077 Sum_probs=59.2
Q ss_pred CeEEEEcCCc-cHHH-HHHH-HhCCCCe-EEEEeCCHH---HHHHHHHHHHhcCccCCCCeEEEEccCCCCCCC-----C
Q 021975 168 GLLVDVSCGS-GLFS-RKFA-KSGTYSG-VVALDFSEN---MLRQCYDFIKQDNTILTSNLALVRADVCRLPFA-----S 235 (304)
Q Consensus 168 ~~vLDiGcG~-G~~~-~~l~-~~~~~~~-v~giD~s~~---~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~-----~ 235 (304)
.+||-+|+|. |.+. ..++ +.. +.+ |+++|.+++ ..+.+++ . ....+ |..+..+. .
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~----l------Ga~~v--~~~~~~~~~i~~~~ 240 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEE----L------DATYV--DSRQTPVEDVPDVY 240 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHH----T------TCEEE--ETTTSCGGGHHHHS
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHH----c------CCccc--CCCccCHHHHHHhC
Confidence 8999999864 6777 7777 653 335 999999887 7777765 1 22333 32221111 1
Q ss_pred CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
+.+|+|+-.- .. ...++++.+.|+++|+++.....
T Consensus 241 gg~Dvvid~~-----g~-~~~~~~~~~~l~~~G~iv~~g~~ 275 (357)
T 2b5w_A 241 EQMDFIYEAT-----GF-PKHAIQSVQALAPNGVGALLGVP 275 (357)
T ss_dssp CCEEEEEECS-----CC-HHHHHHHHHHEEEEEEEEECCCC
T ss_pred CCCCEEEECC-----CC-hHHHHHHHHHHhcCCEEEEEeCC
Confidence 3688887643 22 23588899999999998876543
No 342
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=93.89 E-value=0.3 Score=44.45 Aligned_cols=45 Identities=9% Similarity=0.109 Sum_probs=33.9
Q ss_pred CCeEEEEcCCccHHHHHHHHhC-------CCCeEEEEeCCHHHHHHHHHHHH
Q 021975 167 GGLLVDVSCGSGLFSRKFAKSG-------TYSGVVALDFSENMLRQCYDFIK 211 (304)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~-------~~~~v~giD~s~~~~~~a~~~~~ 211 (304)
.-.|+|+|.|.|.+...+.+.. ...+++.||+|+...+.-++.++
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 4479999999999977665431 23489999999988876666554
No 343
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.86 E-value=0.35 Score=43.49 Aligned_cols=99 Identities=15% Similarity=0.139 Sum_probs=63.9
Q ss_pred hcccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccC--CCCC-----C
Q 021975 162 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV--CRLP-----F 233 (304)
Q Consensus 162 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~--~~lp-----~ 233 (304)
....++.+||-+|+|. |.....+++.....+|+++|.+++.++.+++. + .. .++...- .++. .
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----G----a~-~vi~~~~~~~~~~~~~~~~ 257 (374)
T 2jhf_A 187 AKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV----G----AT-ECVNPQDYKKPIQEVLTEM 257 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----T----CS-EEECGGGCSSCHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----C----Cc-eEecccccchhHHHHHHHH
Confidence 3455788999999875 77777887764223799999999888887651 1 11 1221110 1110 1
Q ss_pred CCCccceEEecchhccCCCHHHHHHHHHHhcccC-cEEEEEEe
Q 021975 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTF 275 (304)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~lvi~~~ 275 (304)
..+.+|+|+..- .. ...++...+.|+++ |++++...
T Consensus 258 ~~~g~D~vid~~-----g~-~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 258 SNGGVDFSFEVI-----GR-LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp TTSCBSEEEECS-----CC-HHHHHHHHHHBCTTTCEEEECSC
T ss_pred hCCCCcEEEECC-----CC-HHHHHHHHHHhhcCCcEEEEecc
Confidence 123689888643 22 34578899999999 99887653
No 344
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.86 E-value=0.28 Score=44.18 Aligned_cols=99 Identities=14% Similarity=0.123 Sum_probs=64.1
Q ss_pred hcccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEcc-C-CCCC-----C
Q 021975 162 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD-V-CRLP-----F 233 (304)
Q Consensus 162 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d-~-~~lp-----~ 233 (304)
....++.+||-+|+|. |.+...+++.....+|+++|.+++.++.+++. + .. .++... . .++. .
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----G----a~-~vi~~~~~~~~~~~~i~~~ 257 (373)
T 1p0f_A 187 AKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL----G----AT-ECLNPKDYDKPIYEVICEK 257 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT----T----CS-EEECGGGCSSCHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----C----Cc-EEEecccccchHHHHHHHH
Confidence 3455788999999875 77777777763223799999999888887651 1 11 122111 0 1110 1
Q ss_pred CCCccceEEecchhccCCCHHHHHHHHHHhcccC-cEEEEEEe
Q 021975 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTF 275 (304)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~lvi~~~ 275 (304)
..+.+|+|+-.-. . ...++...+.|+++ |++++...
T Consensus 258 t~gg~Dvvid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 258 TNGGVDYAVECAG-----R-IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp TTSCBSEEEECSC-----C-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred hCCCCCEEEECCC-----C-HHHHHHHHHHHhcCCCEEEEEcc
Confidence 1236899886432 2 34688899999999 99887654
No 345
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.84 E-value=0.25 Score=43.65 Aligned_cols=100 Identities=10% Similarity=0.015 Sum_probs=64.3
Q ss_pred HhhcccCCCeEEEEcC--CccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----
Q 021975 160 EYFKSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----- 232 (304)
Q Consensus 160 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----- 232 (304)
+.....++.+||-+|+ |.|.....+++.. +.+|+++|.+++.++.+.+.+ + .. ..+...-.+..
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~---g----~~-~~~~~~~~~~~~~~~~ 213 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEEL---G----FD-GAIDYKNEDLAAGLKR 213 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTT---C----CS-EEEETTTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc---C----CC-EEEECCCHHHHHHHHH
Confidence 3445567889999998 4577777777653 339999999998887773321 1 11 12221111110
Q ss_pred CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
...+.+|+|+.... ...+....+.|+++|++++...
T Consensus 214 ~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 214 ECPKGIDVFFDNVG-------GEILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp HCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECCC
T ss_pred hcCCCceEEEECCC-------cchHHHHHHHHhhCCEEEEEee
Confidence 11246999887543 2368889999999999987654
No 346
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.84 E-value=0.28 Score=44.11 Aligned_cols=99 Identities=17% Similarity=0.190 Sum_probs=64.0
Q ss_pred hcccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEcc-C-CCCC-----C
Q 021975 162 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD-V-CRLP-----F 233 (304)
Q Consensus 162 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d-~-~~lp-----~ 233 (304)
....++.+||-+|+|. |.+...+++.....+|+++|.+++.++.+++. + .. .++... . .++. .
T Consensus 188 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----G----a~-~vi~~~~~~~~~~~~~~~~ 258 (374)
T 1cdo_A 188 AKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF----G----AT-DFVNPNDHSEPISQVLSKM 258 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----T----CC-EEECGGGCSSCHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh----C----Cc-eEEeccccchhHHHHHHHH
Confidence 3456788999999875 77777888764223799999999888887751 1 11 122111 0 1110 1
Q ss_pred CCCccceEEecchhccCCCHHHHHHHHHHhcccC-cEEEEEEe
Q 021975 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTF 275 (304)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~lvi~~~ 275 (304)
..+.+|+|+..-. . ...++...+.|+++ |++++...
T Consensus 259 ~~~g~D~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 259 TNGGVDFSLECVG-----N-VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp HTSCBSEEEECSC-----C-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred hCCCCCEEEECCC-----C-HHHHHHHHHHhhcCCcEEEEEcC
Confidence 1236898886432 2 34688899999999 99887654
No 347
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.80 E-value=0.25 Score=43.82 Aligned_cols=99 Identities=15% Similarity=0.194 Sum_probs=63.3
Q ss_pred HhhcccCCCeEEEEcCC--ccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC----
Q 021975 160 EYFKSAQGGLLVDVSCG--SGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---- 232 (304)
Q Consensus 160 ~~l~~~~~~~vLDiGcG--~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---- 232 (304)
......++.+||-+|+| .|.....+++. |. +|+++|.+++.++.+++. + ... .+...-.++.
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~l----g----a~~-~~~~~~~~~~~~~~ 206 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF--RLIAVTRNNKHTEELLRL----G----AAY-VIDTSTAPLYETVM 206 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC--EEEEEESSSTTHHHHHHH----T----CSE-EEETTTSCHHHHHH
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHhC----C----CcE-EEeCCcccHHHHHH
Confidence 33455678899999997 57777777765 54 999999999888888762 1 121 2221111110
Q ss_pred --CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 233 --FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 233 --~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
.....+|+|+....- ....+..+.|++||+++.....
T Consensus 207 ~~~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 207 ELTNGIGADAAIDSIGG-------PDGNELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp HHTTTSCEEEEEESSCH-------HHHHHHHHTEEEEEEEEECCCT
T ss_pred HHhCCCCCcEEEECCCC-------hhHHHHHHHhcCCCEEEEEeec
Confidence 113479999875431 1234455899999999887654
No 348
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.78 E-value=0.26 Score=43.72 Aligned_cols=96 Identities=10% Similarity=-0.001 Sum_probs=62.7
Q ss_pred hcccCCCeEEEEcC--CccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC---CC----
Q 021975 162 FKSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR---LP---- 232 (304)
Q Consensus 162 l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~---lp---- 232 (304)
....++.+||-+|+ |.|.....+++.. +.+|+++|.+++.++.+++.+ + ... .+ |..+ +.
T Consensus 151 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~---g----~~~-~~--d~~~~~~~~~~~~ 219 (345)
T 2j3h_A 151 CSPKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKF---G----FDD-AF--NYKEESDLTAALK 219 (345)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTS---C----CSE-EE--ETTSCSCSHHHHH
T ss_pred hCCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc---C----Cce-EE--ecCCHHHHHHHHH
Confidence 34557889999997 4677777777653 249999999998877776321 1 111 22 2221 10
Q ss_pred -CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 233 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 233 -~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
...+.+|+|+.... ...+....+.|++||++++...
T Consensus 220 ~~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 220 RCFPNGIDIYFENVG-------GKMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp HHCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECCC
T ss_pred HHhCCCCcEEEECCC-------HHHHHHHHHHHhcCCEEEEEcc
Confidence 01246899887543 1368889999999999887643
No 349
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=93.70 E-value=0.026 Score=35.49 Aligned_cols=35 Identities=20% Similarity=0.314 Sum_probs=24.1
Q ss_pred cCCcCCeeeccCCCccccccCCCCccccccccCceeeCCCCccc
Q 021975 54 LELEGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (304)
Q Consensus 54 ~~~~~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (304)
..+....--||.||++...... ...++|..||..+
T Consensus 13 ~kv~~~~k~CP~CG~~~fm~~~---------~~R~~C~kCG~t~ 47 (50)
T 3j20_Y 13 GKVIRKNKFCPRCGPGVFMADH---------GDRWACGKCGYTE 47 (50)
T ss_dssp SCEECSSEECSSSCSSCEEEEC---------SSEEECSSSCCEE
T ss_pred CEEEEecccCCCCCCceEEecC---------CCeEECCCCCCEE
Confidence 3455556679999997543221 1689999999865
No 350
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=93.67 E-value=0.021 Score=40.10 Aligned_cols=30 Identities=23% Similarity=0.627 Sum_probs=23.0
Q ss_pred CeeeccCCCccccccCCCCccccccccCceeeCCCCccc
Q 021975 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (304)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (304)
..+.||.||........ .+.|.|+.|+..+
T Consensus 26 ~~y~Cp~CG~~~v~r~a---------tGiW~C~~Cg~~~ 55 (83)
T 1vq8_Z 26 EDHACPNCGEDRVDRQG---------TGIWQCSYCDYKF 55 (83)
T ss_dssp SCEECSSSCCEEEEEEE---------TTEEEETTTCCEE
T ss_pred ccCcCCCCCCcceeccC---------CCeEECCCCCCEe
Confidence 45899999997654332 2789999999876
No 351
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.60 E-value=0.63 Score=42.35 Aligned_cols=100 Identities=12% Similarity=0.016 Sum_probs=64.1
Q ss_pred cccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC------CCC
Q 021975 163 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------FAS 235 (304)
Q Consensus 163 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~~~ 235 (304)
...++.+||-+|+|. |.+...+++.....+|+++|.++..++.+++.- .. .++..+-.++. ...
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lG--------a~-~vi~~~~~~~~~~i~~~t~g 280 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELG--------AD-HVIDPTKENFVEAVLDYTNG 280 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHT--------CS-EEECTTTSCHHHHHHHHTTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcC--------CC-EEEcCCCCCHHHHHHHHhCC
Confidence 345688999999875 777778887753348999999999988887631 11 12221111110 112
Q ss_pred CccceEEecchhccCCCHHHHHHHHHHhc----ccCcEEEEEEeC
Q 021975 236 GFVDAVHAGAALHCWPSPSNAVAEISRIL----RSGGVFVGTTFL 276 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~L----kpgG~lvi~~~~ 276 (304)
..+|+|+-. +..+...+..+.+.| ++||++++....
T Consensus 281 ~g~D~vid~-----~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 281 LGAKLFLEA-----TGVPQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp CCCSEEEEC-----SSCHHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred CCCCEEEEC-----CCCcHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 368988864 334544566666666 999999886543
No 352
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.59 E-value=0.22 Score=44.91 Aligned_cols=101 Identities=18% Similarity=0.174 Sum_probs=65.5
Q ss_pred hhcccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEcc--CCCCC-----
Q 021975 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD--VCRLP----- 232 (304)
Q Consensus 161 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d--~~~lp----- 232 (304)
.....++.+||-+|+|. |.+...+++.....+|+++|.+++.++.+++. + .. .++... -.++.
T Consensus 188 ~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l----G----a~-~vi~~~~~~~~~~~~i~~ 258 (378)
T 3uko_A 188 TAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF----G----VN-EFVNPKDHDKPIQEVIVD 258 (378)
T ss_dssp TTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT----T----CC-EEECGGGCSSCHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----C----Cc-EEEccccCchhHHHHHHH
Confidence 34456788999999975 77888887764223899999999888887651 1 11 122211 11110
Q ss_pred CCCCccceEEecchhccCCCHHHHHHHHHHhcccC-cEEEEEEeC
Q 021975 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTFL 276 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~lvi~~~~ 276 (304)
...+.+|+|+-.- .. ...++...+.|++| |++++....
T Consensus 259 ~~~gg~D~vid~~-----g~-~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 259 LTDGGVDYSFECI-----GN-VSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp HTTSCBSEEEECS-----CC-HHHHHHHHHTBCTTTCEEEECSCC
T ss_pred hcCCCCCEEEECC-----CC-HHHHHHHHHHhhccCCEEEEEccc
Confidence 1123799988643 22 34588899999997 998886653
No 353
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.54 E-value=0.35 Score=42.92 Aligned_cols=95 Identities=23% Similarity=0.235 Sum_probs=62.7
Q ss_pred cccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCC------C
Q 021975 163 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA------S 235 (304)
Q Consensus 163 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~------~ 235 (304)
...++.+||-+|+|. |.....+++.. +.+|+++|.+++.++.+++ .+ .. .++ |..+..+. .
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----lG----a~-~~~--d~~~~~~~~~~~~~~ 228 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKE----LG----AD-LVV--NPLKEDAAKFMKEKV 228 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH----TT----CS-EEE--CTTTSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----CC----CC-EEe--cCCCccHHHHHHHHh
Confidence 455688999999964 77777777653 3499999999998888765 12 11 112 32221110 0
Q ss_pred CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
+.+|+|+.... . ...++...+.|+++|+++....
T Consensus 229 ~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 229 GGVHAAVVTAV-----S-KPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp SSEEEEEESSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCEEEECCC-----C-HHHHHHHHHHhhcCCEEEEecc
Confidence 36898876432 2 2467889999999999887654
No 354
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.41 E-value=0.36 Score=43.42 Aligned_cols=99 Identities=15% Similarity=0.124 Sum_probs=63.9
Q ss_pred hcccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEcc-C-CCCC-----C
Q 021975 162 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD-V-CRLP-----F 233 (304)
Q Consensus 162 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d-~-~~lp-----~ 233 (304)
....++.+||-+|+|. |.+...+++.....+|+++|.+++.++.+++. + .. .++... . .++. .
T Consensus 191 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----G----a~-~vi~~~~~~~~~~~~v~~~ 261 (376)
T 1e3i_A 191 AKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL----G----AT-DCLNPRELDKPVQDVITEL 261 (376)
T ss_dssp SCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----T----CS-EEECGGGCSSCHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----C----Cc-EEEccccccchHHHHHHHH
Confidence 3455788999999875 77778888774223799999999888887652 1 11 122111 0 1110 1
Q ss_pred CCCccceEEecchhccCCCHHHHHHHHHHhcccC-cEEEEEEe
Q 021975 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTF 275 (304)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~lvi~~~ 275 (304)
..+.+|+|+-.- .. ...+++..+.|++| |++++...
T Consensus 262 ~~~g~Dvvid~~-----G~-~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 262 TAGGVDYSLDCA-----GT-AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp HTSCBSEEEESS-----CC-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred hCCCccEEEECC-----CC-HHHHHHHHHHhhcCCCEEEEECC
Confidence 123689888643 22 34688999999999 99887654
No 355
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.35 E-value=0.32 Score=43.71 Aligned_cols=99 Identities=17% Similarity=0.210 Sum_probs=63.9
Q ss_pred hcccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEc-cC-CCCC-----C
Q 021975 162 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA-DV-CRLP-----F 233 (304)
Q Consensus 162 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~-d~-~~lp-----~ 233 (304)
....++.+||-+|+|. |.+...+++.....+|+++|.+++.++.+++. + .. .++.. +. .++. .
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l----G----a~-~vi~~~~~~~~~~~~v~~~ 256 (373)
T 2fzw_A 186 AKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF----G----AT-ECINPQDFSKPIQEVLIEM 256 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH----T----CS-EEECGGGCSSCHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----C----Cc-eEeccccccccHHHHHHHH
Confidence 3456788999999875 77777777763223799999999888888752 1 11 12211 10 1110 1
Q ss_pred CCCccceEEecchhccCCCHHHHHHHHHHhcccC-cEEEEEEe
Q 021975 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTF 275 (304)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~lvi~~~ 275 (304)
..+.+|+|+..-. . ...+++..+.|+++ |++++...
T Consensus 257 ~~~g~D~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 257 TDGGVDYSFECIG-----N-VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp TTSCBSEEEECSC-----C-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred hCCCCCEEEECCC-----c-HHHHHHHHHhhccCCcEEEEEec
Confidence 1236899886432 2 34588899999999 99887654
No 356
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=93.21 E-value=0.24 Score=44.05 Aligned_cols=68 Identities=16% Similarity=0.159 Sum_probs=51.6
Q ss_pred CCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCC-CCccceEEecc
Q 021975 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA-SGFVDAVHAGA 245 (304)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~-~~~fD~V~~~~ 245 (304)
..+++|+.||.|.+...+...|. ..++++|+++.+++..+.+.... . .+|+.++... -..+|+|+...
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~-~~v~~~e~d~~a~~t~~~N~~~~--------~--~~Di~~~~~~~~~~~D~l~~gp 79 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGA-ECVYSNEWDKYAQEVYEMNFGEK--------P--EGDITQVNEKTIPDHDILCAGF 79 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTC-EEEEEECCCHHHHHHHHHHHSCC--------C--BSCGGGSCGGGSCCCSEEEEEC
T ss_pred CCcEEEECCCcCHHHHHHHHCCC-eEEEEEeCCHHHHHHHHHHcCCC--------C--cCCHHHcCHhhCCCCCEEEECC
Confidence 46899999999999999999874 46889999999999988876321 1 5777665311 12589999863
No 357
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.18 E-value=0.38 Score=42.51 Aligned_cols=97 Identities=18% Similarity=0.211 Sum_probs=63.6
Q ss_pred cccCCCeEEEEcC--CccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC------CC
Q 021975 163 KSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------FA 234 (304)
Q Consensus 163 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~~ 234 (304)
...++.+||-+|+ |.|.....+++.. +.+|+++|.+++.++.+++. + .. .++..+-.++. ..
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----g----a~-~~~~~~~~~~~~~~~~~~~ 214 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEY----G----AE-YLINASKEDILRQVLKFTN 214 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----T----CS-EEEETTTSCHHHHHHHHTT
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----C----Cc-EEEeCCCchHHHHHHHHhC
Confidence 4567889999994 3577777777663 34999999999888877662 1 11 12222111110 11
Q ss_pred CCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
...+|+|+....- ..++...+.|++||+++.....
T Consensus 215 ~~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G~~ 249 (334)
T 3qwb_A 215 GKGVDASFDSVGK-------DTFEISLAALKRKGVFVSFGNA 249 (334)
T ss_dssp TSCEEEEEECCGG-------GGHHHHHHHEEEEEEEEECCCT
T ss_pred CCCceEEEECCCh-------HHHHHHHHHhccCCEEEEEcCC
Confidence 3469999875432 3578888999999999886543
No 358
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.17 E-value=0.18 Score=44.85 Aligned_cols=95 Identities=17% Similarity=0.169 Sum_probs=61.7
Q ss_pred cccCCCeEEEEcC--CccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCC---CCC-----
Q 021975 163 KSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC---RLP----- 232 (304)
Q Consensus 163 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~---~lp----- 232 (304)
...++.+||-+|+ |.|..+..+++.. +.+|+++|.+++..+.+++ .+ .. ..+ |.. ++.
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~----~g----~~-~~~--d~~~~~~~~~~~~~ 233 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRS----IG----GE-VFI--DFTKEKDIVGAVLK 233 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHH----TT----CC-EEE--ETTTCSCHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHH----cC----Cc-eEE--ecCccHhHHHHHHH
Confidence 4556889999998 4677776666653 2399999998887776655 12 11 122 332 110
Q ss_pred CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
...+.+|+|+.... ....++.+.+.|+++|+++....
T Consensus 234 ~~~~~~D~vi~~~g------~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 234 ATDGGAHGVINVSV------SEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HHTSCEEEEEECSS------CHHHHHHHTTSEEEEEEEEECCC
T ss_pred HhCCCCCEEEECCC------cHHHHHHHHHHHhcCCEEEEEeC
Confidence 00126898887543 13468889999999999887654
No 359
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=93.11 E-value=0.054 Score=40.76 Aligned_cols=35 Identities=20% Similarity=0.468 Sum_probs=26.4
Q ss_pred cCCcCCeeeccCCCccccccCCCCccccccccCceeeCCCCcccc
Q 021975 54 LELEGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYS 98 (304)
Q Consensus 54 ~~~~~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 98 (304)
..+...+-.||.|+++....+. ..+.|+.|++.+.
T Consensus 21 g~~M~~lP~CP~C~seytYeDg----------~l~vCPeC~hEW~ 55 (138)
T 2akl_A 21 GHMVSTLPPCPQCNSEYTYEDG----------ALLVCPECAHEWS 55 (138)
T ss_dssp --CCCCSCCCTTTCCCCCEECS----------SSEEETTTTEEEC
T ss_pred ccccccCCCCCCCCCcceEecC----------CeEECCccccccC
Confidence 3444467889999999877553 5799999999884
No 360
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.06 E-value=0.42 Score=42.65 Aligned_cols=95 Identities=12% Similarity=0.069 Sum_probs=61.8
Q ss_pred hcccCCCeEEEEcC--CccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-------
Q 021975 162 FKSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------- 232 (304)
Q Consensus 162 l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------- 232 (304)
....++.+||-.|+ |.|.....+++.. +.+|+++|.+++.++.+++. + .. ..+ |..+..
T Consensus 166 ~~~~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----g----a~-~~~--d~~~~~~~~~~~~ 233 (351)
T 1yb5_A 166 ACVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQN----G----AH-EVF--NHREVNYIDKIKK 233 (351)
T ss_dssp SCCCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----T----CS-EEE--ETTSTTHHHHHHH
T ss_pred hCCCCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHc----C----CC-EEE--eCCCchHHHHHHH
Confidence 34556889999997 4566666666653 24999999999888776541 1 11 122 222111
Q ss_pred -CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 233 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 233 -~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
.....+|+|+.... ...+....+.|+++|+++....
T Consensus 234 ~~~~~~~D~vi~~~G-------~~~~~~~~~~l~~~G~iv~~g~ 270 (351)
T 1yb5_A 234 YVGEKGIDIIIEMLA-------NVNLSKDLSLLSHGGRVIVVGS 270 (351)
T ss_dssp HHCTTCEEEEEESCH-------HHHHHHHHHHEEEEEEEEECCC
T ss_pred HcCCCCcEEEEECCC-------hHHHHHHHHhccCCCEEEEEec
Confidence 11236999987643 2357788999999999887653
No 361
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=93.03 E-value=0.66 Score=41.07 Aligned_cols=98 Identities=16% Similarity=0.138 Sum_probs=60.6
Q ss_pred cccCCCeEEEEcCCcc-HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC------CCC
Q 021975 163 KSAQGGLLVDVSCGSG-LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------FAS 235 (304)
Q Consensus 163 ~~~~~~~vLDiGcG~G-~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~~~ 235 (304)
...++.+||=+|+|.+ .+...+++.....+|+++|.+++-++.+++. .....+-..+ .+.. ...
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~--------Ga~~~i~~~~-~~~~~~v~~~t~g 230 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI--------GADVTINSGD-VNPVDEIKKITGG 230 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT--------TCSEEEEC-C-CCHHHHHHHHTTS
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc--------CCeEEEeCCC-CCHHHHhhhhcCC
Confidence 4567889999999874 4455555543356999999999888777762 1222221111 1110 112
Q ss_pred CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
..+|.++...+ -...+....+.|+++|++++...
T Consensus 231 ~g~d~~~~~~~------~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 231 LGVQSAIVCAV------ARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp SCEEEEEECCS------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCceEEEEecc------CcchhheeheeecCCceEEEEec
Confidence 34666655321 24568889999999999887654
No 362
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=92.86 E-value=0.49 Score=42.04 Aligned_cols=91 Identities=13% Similarity=0.166 Sum_probs=59.7
Q ss_pred CCCeEEEEc-CC-ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CCCCcc
Q 021975 166 QGGLLVDVS-CG-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FASGFV 238 (304)
Q Consensus 166 ~~~~vLDiG-cG-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~~~~f 238 (304)
++.+||-+| +| .|.....+++.. +.+|+++|.+++.++.+++. + .. .++..+ .++. ...+.+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l----G----a~-~vi~~~-~~~~~~~~~~~~~g~ 218 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKM----G----AD-IVLNHK-ESLLNQFKTQGIELV 218 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHH----T----CS-EEECTT-SCHHHHHHHHTCCCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----C----Cc-EEEECC-ccHHHHHHHhCCCCc
Confidence 688999994 55 377777777763 34999999999988888772 1 11 112111 1110 123469
Q ss_pred ceEEecchhccCCCHHHHHHHHHHhcccCcEEEEE
Q 021975 239 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGT 273 (304)
Q Consensus 239 D~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~ 273 (304)
|+|+.... -...+..+.+.|+++|+++..
T Consensus 219 Dvv~d~~g------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 219 DYVFCTFN------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEEEESSC------HHHHHHHHHHHEEEEEEEEES
T ss_pred cEEEECCC------chHHHHHHHHHhccCCEEEEE
Confidence 98887432 245678899999999998754
No 363
>2j6a_A Protein TRM112; translation termination, methyltransferase, transferase, ERF1, nuclear protein, protein methylation; 1.7A {Saccharomyces cerevisiae}
Probab=92.83 E-value=0.026 Score=43.60 Aligned_cols=30 Identities=27% Similarity=0.515 Sum_probs=25.9
Q ss_pred ccccCceeeCCCCccccCCCCeeeeecccC
Q 021975 82 AIYRSGFKCRKCDKTYSSKDNYLDLTVISG 111 (304)
Q Consensus 82 ~i~~~~l~C~~C~~~~~~~~g~~~~~~~~~ 111 (304)
.+.++.+.|+.||+.|++++|+++++.+..
T Consensus 104 ~v~eg~L~C~~cg~~YPI~dGIP~mL~~ea 133 (141)
T 2j6a_A 104 SIAEGEMKCRNCGHIYYIKNGIPNLLLPPH 133 (141)
T ss_dssp EEEEEEEECTTTCCEEEEETTEESSCCCSS
T ss_pred eccCCEEECCCCCCcccccCCccCcCCcHH
Confidence 355688999999999999999999997643
No 364
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=92.80 E-value=0.2 Score=44.66 Aligned_cols=97 Identities=18% Similarity=0.231 Sum_probs=61.9
Q ss_pred hcccCCCeEEEEcCC--ccHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC-----C
Q 021975 162 FKSAQGGLLVDVSCG--SGLFSRKFAKS--GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-----P 232 (304)
Q Consensus 162 l~~~~~~~vLDiGcG--~G~~~~~l~~~--~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-----p 232 (304)
....++.+||-+|+| .|.....+++. +. +|+++|.+++.++.+++. + ... ++...-.+. .
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga--~Vi~~~~~~~~~~~~~~~----g----~~~-~~~~~~~~~~~~~~~ 234 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA--TIIGVDVREEAVEAAKRA----G----ADY-VINASMQDPLAEIRR 234 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC--EEEEEESSHHHHHHHHHH----T----CSE-EEETTTSCHHHHHHH
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHh----C----CCE-EecCCCccHHHHHHH
Confidence 345568899999998 45555555554 54 999999999888877652 1 111 221111111 0
Q ss_pred CCC-CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 233 FAS-GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 233 ~~~-~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
... +.+|+|+.... ....+++..+.|+++|+++....
T Consensus 235 ~~~~~~~d~vi~~~g------~~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 235 ITESKGVDAVIDLNN------SEKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp HTTTSCEEEEEESCC------CHHHHTTGGGGEEEEEEEEECCS
T ss_pred HhcCCCceEEEECCC------CHHHHHHHHHHHhcCCEEEEECC
Confidence 112 47999887542 13467888899999999887654
No 365
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=92.76 E-value=0.15 Score=44.67 Aligned_cols=71 Identities=14% Similarity=0.018 Sum_probs=54.1
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCC----CCccce
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSG-VVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA----SGFVDA 240 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~-v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~----~~~fD~ 240 (304)
...+++|+-||.|.+...+.+.|.... ++++|+++.+++..+.+. ++..++.+|+.++... .+.+|+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~--------~~~~~~~~DI~~i~~~~i~~~~~~Dl 86 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH--------QGKIMYVGDVRSVTQKHIQEWGPFDL 86 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT--------TTCEEEECCGGGCCHHHHHHTCCCSE
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC--------CCCceeCCChHHccHHHhcccCCcCE
Confidence 456899999999999999999886333 699999999888777653 3456788898776411 136899
Q ss_pred EEec
Q 021975 241 VHAG 244 (304)
Q Consensus 241 V~~~ 244 (304)
++..
T Consensus 87 l~gg 90 (295)
T 2qrv_A 87 VIGG 90 (295)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9985
No 366
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=92.71 E-value=0.11 Score=46.29 Aligned_cols=70 Identities=16% Similarity=0.163 Sum_probs=52.8
Q ss_pred CeEEEEcCCccHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC---CCCCccceEEe
Q 021975 168 GLLVDVSCGSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---FASGFVDAVHA 243 (304)
Q Consensus 168 ~~vLDiGcG~G~~~~~l~~~~~~-~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---~~~~~fD~V~~ 243 (304)
.+++|+-||.|.+...+.+.|.. ..+.++|+++.+++.-+.++ +...++.+|+.++. ++...+|+++.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~--------~~~~~~~~DI~~~~~~~~~~~~~D~l~g 75 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNF--------PETNLLNRNIQQLTPQVIKKWNVDTILM 75 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC--------TTSCEECCCGGGCCHHHHHHTTCCEEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhC--------CCCceeccccccCCHHHhccCCCCEEEe
Confidence 47999999999999999988742 36789999999988888764 33446778887654 22235899987
Q ss_pred cc
Q 021975 244 GA 245 (304)
Q Consensus 244 ~~ 245 (304)
..
T Consensus 76 gp 77 (333)
T 4h0n_A 76 SP 77 (333)
T ss_dssp CC
T ss_pred cC
Confidence 53
No 367
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=92.63 E-value=0.32 Score=43.19 Aligned_cols=97 Identities=16% Similarity=0.093 Sum_probs=63.2
Q ss_pred hhcccCCCeEEEEcC--CccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC------
Q 021975 161 YFKSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------ 232 (304)
Q Consensus 161 ~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------ 232 (304)
.....++.+||-+|+ |.|.....+++.. +.+|++++.+++..+.+++. + .. .++..+ .++.
T Consensus 154 ~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----g----a~-~v~~~~-~~~~~~v~~~ 222 (342)
T 4eye_A 154 RGQLRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSV----G----AD-IVLPLE-EGWAKAVREA 222 (342)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH----T----CS-EEEESS-TTHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----C----Cc-EEecCc-hhHHHHHHHH
Confidence 344567889999997 4577777777763 34999999999888877762 1 11 122222 2211
Q ss_pred CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
.....+|+|+..-.- ..+....+.|+++|++++...
T Consensus 223 ~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 223 TGGAGVDMVVDPIGG-------PAFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp TTTSCEEEEEESCC---------CHHHHHHTEEEEEEEEEC--
T ss_pred hCCCCceEEEECCch-------hHHHHHHHhhcCCCEEEEEEc
Confidence 112369999875432 247888999999999987653
No 368
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.60 E-value=0.52 Score=41.43 Aligned_cols=98 Identities=11% Similarity=0.115 Sum_probs=64.3
Q ss_pred hcccCCCeEEEEcC--CccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC------
Q 021975 162 FKSAQGGLLVDVSC--GSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------ 232 (304)
Q Consensus 162 l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------ 232 (304)
....++.+||-+|+ |.|.....+++. |. +|+++|.+++.++.+++. + .. ..+...-.++.
T Consensus 136 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~~----G----a~-~~~~~~~~~~~~~~~~~ 204 (325)
T 3jyn_A 136 YQVKPGEIILFHAAAGGVGSLACQWAKALGA--KLIGTVSSPEKAAHAKAL----G----AW-ETIDYSHEDVAKRVLEL 204 (325)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHH----T----CS-EEEETTTSCHHHHHHHH
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHc----C----CC-EEEeCCCccHHHHHHHH
Confidence 34567889999993 357777777765 54 999999999988888762 1 11 12221111110
Q ss_pred CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
.....+|+|+....- ..+....+.|++||++++.....
T Consensus 205 ~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~~~ 242 (325)
T 3jyn_A 205 TDGKKCPVVYDGVGQ-------DTWLTSLDSVAPRGLVVSFGNAS 242 (325)
T ss_dssp TTTCCEEEEEESSCG-------GGHHHHHTTEEEEEEEEECCCTT
T ss_pred hCCCCceEEEECCCh-------HHHHHHHHHhcCCCEEEEEecCC
Confidence 123469998875432 35778899999999998876543
No 369
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=92.46 E-value=0.8 Score=40.97 Aligned_cols=97 Identities=13% Similarity=0.089 Sum_probs=63.6
Q ss_pred hcccCCCeEEEEc--CCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC
Q 021975 162 FKSAQGGLLVDVS--CGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA 234 (304)
Q Consensus 162 l~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~ 234 (304)
....++.+||-+| .|.|.....+++.. +.+|++++.+++.++.+++. + .. .++..+-.++. ..
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~----G----a~-~~~~~~~~~~~~~~~~~~ 228 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSL----G----CD-RPINYKTEPVGTVLKQEY 228 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----T----CS-EEEETTTSCHHHHHHHHC
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHc----C----Cc-EEEecCChhHHHHHHHhc
Confidence 3456788999999 34678777777763 34999999999888877651 1 11 12221111110 01
Q ss_pred CCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
...+|+|+..-. . ..++.+.+.|+++|++++...
T Consensus 229 ~~g~D~vid~~g-----~--~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 229 PEGVDVVYESVG-----G--AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp TTCEEEEEECSC-----T--HHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCCEEEECCC-----H--HHHHHHHHHHhcCCEEEEEeC
Confidence 246899887543 2 468889999999999887654
No 370
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=92.43 E-value=1.4 Score=38.80 Aligned_cols=102 Identities=16% Similarity=0.142 Sum_probs=64.0
Q ss_pred hhcccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC------C
Q 021975 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------F 233 (304)
Q Consensus 161 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~ 233 (304)
.....++.+||-+|+|. |.+...+++......++++|.+++-++.+++. | .. ..+...-.+.+ -
T Consensus 155 ~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l----G----a~-~~i~~~~~~~~~~~~~~~ 225 (346)
T 4a2c_A 155 LAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF----G----AM-QTFNSSEMSAPQMQSVLR 225 (346)
T ss_dssp HTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----T----CS-EEEETTTSCHHHHHHHHG
T ss_pred HhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc----C----Ce-EEEeCCCCCHHHHHHhhc
Confidence 34456788999999986 55666666664344678999999988888762 1 22 22222111111 1
Q ss_pred CCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
....+|+|+..- .. ...++...++|++||.+++.....
T Consensus 226 ~~~g~d~v~d~~-----G~-~~~~~~~~~~l~~~G~~v~~g~~~ 263 (346)
T 4a2c_A 226 ELRFNQLILETA-----GV-PQTVELAVEIAGPHAQLALVGTLH 263 (346)
T ss_dssp GGCSSEEEEECS-----CS-HHHHHHHHHHCCTTCEEEECCCCS
T ss_pred ccCCcccccccc-----cc-cchhhhhhheecCCeEEEEEeccC
Confidence 123567776532 22 346888899999999998766443
No 371
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.32 E-value=1.8 Score=32.76 Aligned_cols=92 Identities=11% Similarity=0.088 Sum_probs=60.3
Q ss_pred CCeEEEEcCCc-cHH-HHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC----CCCCccce
Q 021975 167 GGLLVDVSCGS-GLF-SRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----FASGFVDA 240 (304)
Q Consensus 167 ~~~vLDiGcG~-G~~-~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----~~~~~fD~ 240 (304)
..+|+=+|+|. |.. ...|.+.+. +|+++|.+++.++.+++ .++.++.+|..+.. ..-..+|+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~--~v~vid~~~~~~~~~~~----------~g~~~i~gd~~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI--PLVVIETSRTRVDELRE----------RGVRAVLGNAANEEIMQLAHLECAKW 74 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHH----------TTCEEEESCTTSHHHHHHTTGGGCSE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHH----------cCCCEEECCCCCHHHHHhcCcccCCE
Confidence 35788999975 443 344445565 99999999998887765 45778889986532 11246788
Q ss_pred EEecchhccCCCHH--HHHHHHHHhcccCcEEEEEEe
Q 021975 241 VHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 241 V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~lvi~~~ 275 (304)
|+... ++.. ..+....+.+.|+..++....
T Consensus 75 vi~~~-----~~~~~n~~~~~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 75 LILTI-----PNGYEAGEIVASARAKNPDIEIIARAH 106 (140)
T ss_dssp EEECC-----SCHHHHHHHHHHHHHHCSSSEEEEEES
T ss_pred EEEEC-----CChHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 77642 3333 234456677788887666553
No 372
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=92.23 E-value=0.023 Score=38.99 Aligned_cols=39 Identities=26% Similarity=0.550 Sum_probs=22.0
Q ss_pred CeeeccCCCccccccC-----CCCccc-----------cccccCceeeCCCCccc
Q 021975 59 DLFSCPICYEPLIRKG-----PTGLTL-----------GAIYRSGFKCRKCDKTY 97 (304)
Q Consensus 59 ~~l~CP~C~~~l~~~~-----~~~~~~-----------~~i~~~~l~C~~C~~~~ 97 (304)
++-.||+||+++.... ..-.+. ..+.+-.+.||.||-.|
T Consensus 7 ~~~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEF 61 (95)
T 2k5c_A 7 HMAKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEF 61 (95)
T ss_dssp -CEECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCEE
T ss_pred ccccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHHH
Confidence 4678999999863311 011111 11222468999999765
No 373
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=92.16 E-value=0.46 Score=41.67 Aligned_cols=92 Identities=14% Similarity=0.119 Sum_probs=60.7
Q ss_pred eEEEEcC--CccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC-CCCCCCccceEEecc
Q 021975 169 LLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPFASGFVDAVHAGA 245 (304)
Q Consensus 169 ~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp~~~~~fD~V~~~~ 245 (304)
+||-+|+ |.|.....+++.. +.+|++++.+++..+.+++. + ....+-..+... ..+..+.+|+|+-.-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~l----G----a~~vi~~~~~~~~~~~~~~~~d~v~d~~ 219 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSL----G----ANRILSRDEFAESRPLEKQLWAGAIDTV 219 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHH----T----CSEEEEGGGSSCCCSSCCCCEEEEEESS
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----C----CCEEEecCCHHHHHhhcCCCccEEEECC
Confidence 4999997 4588888888774 34999999999988888763 1 111121122111 112245789877542
Q ss_pred hhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 246 ALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 246 vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
.. ..+.+..+.|+++|+++.....
T Consensus 220 -----g~--~~~~~~~~~l~~~G~iv~~G~~ 243 (324)
T 3nx4_A 220 -----GD--KVLAKVLAQMNYGGCVAACGLA 243 (324)
T ss_dssp -----CH--HHHHHHHHTEEEEEEEEECCCT
T ss_pred -----Cc--HHHHHHHHHHhcCCEEEEEecC
Confidence 22 2789999999999999876543
No 374
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=92.07 E-value=0.71 Score=40.99 Aligned_cols=98 Identities=12% Similarity=0.037 Sum_probs=63.2
Q ss_pred hcccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC------CC
Q 021975 162 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------FA 234 (304)
Q Consensus 162 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~~ 234 (304)
... ++.+||-+|+|. |.....+++.....+|+++|.+++.++.+++. + .. .++..+-.++. ..
T Consensus 164 ~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----G----a~-~~~~~~~~~~~~~v~~~~~ 233 (348)
T 2d8a_A 164 GPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----G----AD-YVINPFEEDVVKEVMDITD 233 (348)
T ss_dssp SCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----T----CS-EEECTTTSCHHHHHHHHTT
T ss_pred cCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----C----CC-EEECCCCcCHHHHHHHHcC
Confidence 344 788999999964 77777777764223899999999888887752 1 11 12211111110 11
Q ss_pred CCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
...+|+|+..-. . ...++.+.+.|+++|+++....
T Consensus 234 g~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 234 GNGVDVFLEFSG-----A-PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp TSCEEEEEECSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCCEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEcc
Confidence 236899886532 2 3467889999999999887654
No 375
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.03 E-value=0.34 Score=42.66 Aligned_cols=94 Identities=12% Similarity=0.122 Sum_probs=61.5
Q ss_pred hcccCCCeEEEEcC--CccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC------
Q 021975 162 FKSAQGGLLVDVSC--GSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------ 232 (304)
Q Consensus 162 l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------ 232 (304)
....++.+||-.|+ |.|.....+++. |. +|+++|.+++.++.+++. + ... .+ |..+..
T Consensus 136 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~--~V~~~~~~~~~~~~~~~~----g----~~~-~~--~~~~~~~~~~~~ 202 (327)
T 1qor_A 136 YEIKPDEQFLFHAAAGGVGLIACQWAKALGA--KLIGTVGTAQKAQSALKA----G----AWQ-VI--NYREEDLVERLK 202 (327)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHH----T----CSE-EE--ETTTSCHHHHHH
T ss_pred hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHc----C----CCE-EE--ECCCccHHHHHH
Confidence 34556889999994 456666666554 54 999999999888877652 1 111 22 221111
Q ss_pred --CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 233 --FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 233 --~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
.....+|+|+.... ...++.+.+.|+++|+++....
T Consensus 203 ~~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 203 EITGGKKVRVVYDSVG-------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp HHTTTCCEEEEEECSC-------GGGHHHHHHTEEEEEEEEECCC
T ss_pred HHhCCCCceEEEECCc-------hHHHHHHHHHhcCCCEEEEEec
Confidence 11236899887643 2357888999999999887654
No 376
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=92.03 E-value=0.99 Score=39.92 Aligned_cols=94 Identities=16% Similarity=0.094 Sum_probs=62.8
Q ss_pred cccCCCeEEEEcC--CccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC--------
Q 021975 163 KSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-------- 232 (304)
Q Consensus 163 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-------- 232 (304)
...++.+||-+|+ |.|.....+++.. +.+|+++|.+++.++.+++. + .. .++ |..+..
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~----g----a~-~~~--d~~~~~~~~~~~~~ 230 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKAL----G----AD-ETV--NYTHPDWPKEVRRL 230 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH----T----CS-EEE--ETTSTTHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc----C----CC-EEE--cCCcccHHHHHHHH
Confidence 3456889999998 5677777777653 24999999999888887652 1 11 122 222111
Q ss_pred CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
.....+|+|+.... . ..++.+.+.|+++|+++....
T Consensus 231 ~~~~~~d~vi~~~g-~------~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 231 TGGKGADKVVDHTG-A------LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp TTTTCEEEEEESSC-S------SSHHHHHHHEEEEEEEEESSC
T ss_pred hCCCCceEEEECCC-H------HHHHHHHHhhccCCEEEEEec
Confidence 11246999987653 1 247788899999999887654
No 377
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=91.74 E-value=0.19 Score=45.12 Aligned_cols=98 Identities=12% Similarity=0.148 Sum_probs=62.0
Q ss_pred hcccCCCeEEEEcCCc-cHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCC-CC--CCCCC
Q 021975 162 FKSAQGGLLVDVSCGS-GLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC-RL--PFASG 236 (304)
Q Consensus 162 l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~-~l--p~~~~ 236 (304)
....++.+||-+|+|. |.+...+++. +. +|+++|.+++.++.+++. + .. .++...-. +. ... +
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga--~Vi~~~~~~~~~~~~~~l----G----a~-~v~~~~~~~~~~~~~~-~ 242 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGA--ETYVISRSSRKREDAMKM----G----AD-HYIATLEEGDWGEKYF-D 242 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHTC--EEEEEESSSTTHHHHHHH----T----CS-EEEEGGGTSCHHHHSC-S
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHc----C----CC-EEEcCcCchHHHHHhh-c
Confidence 3456788999999864 7777777765 54 899999999888888762 1 11 12221111 11 011 4
Q ss_pred ccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 237 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
.+|+|+..-.-. ....+++..+.|++||+++....
T Consensus 243 ~~D~vid~~g~~----~~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 243 TFDLIVVCASSL----TDIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp CEEEEEECCSCS----TTCCTTTGGGGEEEEEEEEECCC
T ss_pred CCCEEEECCCCC----cHHHHHHHHHHhcCCCEEEEecC
Confidence 699998754320 01235667789999999887654
No 378
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=91.69 E-value=0.37 Score=44.42 Aligned_cols=46 Identities=11% Similarity=0.244 Sum_probs=35.6
Q ss_pred CCeEEEEcCCccHHHHHHHHh----CC-CCeEEEEeCCHHHHHHHHHHHHh
Q 021975 167 GGLLVDVSCGSGLFSRKFAKS----GT-YSGVVALDFSENMLRQCYDFIKQ 212 (304)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~----~~-~~~v~giD~s~~~~~~a~~~~~~ 212 (304)
...|+|+|.|.|.+...+.+. .+ ..+++.||+|+...+.-++.+..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 468999999999987666543 21 24899999999988877777764
No 379
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=91.68 E-value=0.68 Score=41.47 Aligned_cols=88 Identities=14% Similarity=0.092 Sum_probs=57.5
Q ss_pred CCeEEEEcCCc-cHHHHHHHHh-CCCCeEEEEeCCH---HHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCC------C
Q 021975 167 GGLLVDVSCGS-GLFSRKFAKS-GTYSGVVALDFSE---NMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA------S 235 (304)
Q Consensus 167 ~~~vLDiGcG~-G~~~~~l~~~-~~~~~v~giD~s~---~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~------~ 235 (304)
+.+||-+|+|. |.....+++. |. +|+++|.++ +..+.+++. + ...+ | .+ .+. .
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga--~Vi~~~~~~~~~~~~~~~~~~----g------a~~v--~-~~-~~~~~~~~~~ 244 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL--EVWMANRREPTEVEQTVIEET----K------TNYY--N-SS-NGYDKLKDSV 244 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC--EEEEEESSCCCHHHHHHHHHH----T------CEEE--E-CT-TCSHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCccchHHHHHHHHh----C------Ccee--c-hH-HHHHHHHHhC
Confidence 88999999853 5555666654 54 999999987 777776652 1 2222 2 22 211 1
Q ss_pred CccceEEecchhccCCCHHHHH-HHHHHhcccCcEEEEEEeC
Q 021975 236 GFVDAVHAGAALHCWPSPSNAV-AEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l-~~~~r~LkpgG~lvi~~~~ 276 (304)
+.+|+|+..-.. + ..+ +...+.|+++|+++.....
T Consensus 245 ~~~d~vid~~g~-----~-~~~~~~~~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 245 GKFDVIIDATGA-----D-VNILGNVIPLLGRNGVLGLFGFS 280 (366)
T ss_dssp CCEEEEEECCCC-----C-THHHHHHGGGEEEEEEEEECSCC
T ss_pred CCCCEEEECCCC-----h-HHHHHHHHHHHhcCCEEEEEecC
Confidence 468998875432 1 145 8889999999998876543
No 380
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=91.54 E-value=1.4 Score=39.77 Aligned_cols=112 Identities=8% Similarity=0.038 Sum_probs=72.1
Q ss_pred HHHHHhhcc-cCCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCC
Q 021975 156 KMAQEYFKS-AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (304)
Q Consensus 156 ~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~ 234 (304)
+++.+.+.. ..+.+||.++.+.|.++..++... ++.+.-|--..+..+.+++.+++ ....+.+... ...+
T Consensus 27 ~~ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~~----~~~~~ds~~~~~~~~~n~~~~~~-~~~~~~~~~~-~~~~--- 97 (375)
T 4dcm_A 27 EYLLQQLDDTEIRGPVLILNDAFGALSCALAEHK----PYSIGDSYISELATRENLRLNGI-DESSVKFLDS-TADY--- 97 (375)
T ss_dssp HHHHHTTTTCCCCSCEEEECCSSSHHHHHTGGGC----CEEEESCHHHHHHHHHHHHHTTC-CGGGSEEEET-TSCC---
T ss_pred HHHHHhhhhccCCCCEEEECCCCCHHHHhhccCC----ceEEEhHHHHHHHHHHHHHHcCC-CccceEeccc-cccc---
Confidence 344444433 245689999999999998887653 34444366666677778887763 1223666543 2332
Q ss_pred CCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeCC
Q 021975 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
...||+|+.... .+.......|+.+...|++|+.+++..-..
T Consensus 98 ~~~~~~v~~~lp-k~~~~l~~~L~~l~~~l~~~~~i~~~g~~~ 139 (375)
T 4dcm_A 98 PQQPGVVLIKVP-KTLALLEQQLRALRKVVTSDTRIIAGAKAR 139 (375)
T ss_dssp CSSCSEEEEECC-SCHHHHHHHHHHHHTTCCTTSEEEEEEEGG
T ss_pred ccCCCEEEEEcC-CCHHHHHHHHHHHHhhCCCCCEEEEEeccc
Confidence 357999888542 222233457888999999999998776544
No 381
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=91.50 E-value=0.09 Score=37.47 Aligned_cols=26 Identities=27% Similarity=0.713 Sum_probs=20.6
Q ss_pred eeccCCCccccccCCCCccccccccCceeeCCCCccc
Q 021975 61 FSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (304)
Q Consensus 61 l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (304)
..||.|+.++...+ +.+.|..|+..|
T Consensus 33 ~~CP~Cq~eL~~~g-----------~~~hC~~C~~~f 58 (101)
T 2jne_A 33 LHCPQCQHVLDQDN-----------GHARCRSCGEFI 58 (101)
T ss_dssp CBCSSSCSBEEEET-----------TEEEETTTCCEE
T ss_pred ccCccCCCcceecC-----------CEEECccccchh
Confidence 89999999998754 566788887755
No 382
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=91.41 E-value=0.27 Score=43.74 Aligned_cols=96 Identities=8% Similarity=0.117 Sum_probs=62.5
Q ss_pred cccCCCeEEEEcCCc-cHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEc----cC-CCCCCCC
Q 021975 163 KSAQGGLLVDVSCGS-GLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA----DV-CRLPFAS 235 (304)
Q Consensus 163 ~~~~~~~vLDiGcG~-G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~----d~-~~lp~~~ 235 (304)
.. ++.+||-+|+|. |.+...+++.. ++.+|+++|.+++..+.+++. + .. .++.. +. ..+. ..
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l----G----a~-~vi~~~~~~~~~~~~~-~g 236 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL----G----AD-YVSEMKDAESLINKLT-DG 236 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH----T----CS-EEECHHHHHHHHHHHH-TT
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh----C----CC-EEeccccchHHHHHhh-cC
Confidence 44 688999999975 67777777652 134899999999988888762 1 11 11211 10 1111 12
Q ss_pred CccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
..+|+|+..-. . ...++...+.|+++|+++....
T Consensus 237 ~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 237 LGASIAIDLVG-----T-EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp CCEEEEEESSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCccEEEECCC-----C-hHHHHHHHHHhhcCCEEEEeCC
Confidence 36999987532 2 3368889999999999887654
No 383
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=91.36 E-value=0.084 Score=34.08 Aligned_cols=40 Identities=20% Similarity=0.311 Sum_probs=22.9
Q ss_pred CeeeccCCCccccc-cCCCCccccccccCceeeCCCCcccc
Q 021975 59 DLFSCPICYEPLIR-KGPTGLTLGAIYRSGFKCRKCDKTYS 98 (304)
Q Consensus 59 ~~l~CP~C~~~l~~-~~~~~~~~~~i~~~~l~C~~C~~~~~ 98 (304)
....||.|+..-.. ...+.-..++.+.-.++|.+||+.+.
T Consensus 14 ~~~~Cp~Cg~~~~~~~q~Q~rsadep~T~fy~C~~Cg~~w~ 54 (57)
T 1qyp_A 14 TKITCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTKCGHTWR 54 (57)
T ss_dssp EECCCTTTCCSEEEEEEECCSSSSCSSEEEEEESSSCCEEE
T ss_pred eEeECCCCCCCEEEEEEeecccCCCCCcEEEEcCCCCCEec
Confidence 36789999984221 00000012233345789999998763
No 384
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.24 E-value=3.5 Score=34.88 Aligned_cols=70 Identities=13% Similarity=0.082 Sum_probs=50.1
Q ss_pred CeEEEEcCCccHHHHHHHH----hCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEe
Q 021975 168 GLLVDVSCGSGLFSRKFAK----SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (304)
Q Consensus 168 ~~vLDiGcG~G~~~~~l~~----~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (304)
.+||=.|+ |..+..+.+ .+. +|++++-++........ .++.++.+|+.++. -..+|+|+.
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~----------~~~~~~~~D~~d~~--~~~~d~vi~ 69 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW--RIIGTSRNPDQMEAIRA----------SGAEPLLWPGEEPS--LDGVTHLLI 69 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC--EEEEEESCGGGHHHHHH----------TTEEEEESSSSCCC--CTTCCEEEE
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC--EEEEEEcChhhhhhHhh----------CCCeEEEecccccc--cCCCCEEEE
Confidence 58999995 776665554 455 99999998865544433 56899999998866 457899998
Q ss_pred cchhccCCCH
Q 021975 244 GAALHCWPSP 253 (304)
Q Consensus 244 ~~vl~h~~d~ 253 (304)
........++
T Consensus 70 ~a~~~~~~~~ 79 (286)
T 3ius_A 70 STAPDSGGDP 79 (286)
T ss_dssp CCCCBTTBCH
T ss_pred CCCccccccH
Confidence 7665544444
No 385
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=91.10 E-value=0.17 Score=32.39 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=24.6
Q ss_pred cCCcCCeeeccCCCccccccCCCCccccccccCceeeCCCCccc
Q 021975 54 LELEGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (304)
Q Consensus 54 ~~~~~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (304)
..+...+..||.||+.+..... ...+.|..|+..+
T Consensus 12 gki~~~~~fCPkCG~~~~ma~~---------~dr~~C~kCgyt~ 46 (55)
T 2k4x_A 12 GKLVRKHRFCPRCGPGVFLAEH---------ADRYSCGRCGYTE 46 (55)
T ss_dssp CCCCCSSCCCTTTTTTCCCEEC---------SSEEECTTTCCCE
T ss_pred CEEEEccccCcCCCCceeEecc---------CCEEECCCCCCEE
Confidence 4555567889999996643211 1589999998775
No 386
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=91.04 E-value=0.12 Score=32.47 Aligned_cols=28 Identities=25% Similarity=0.356 Sum_probs=21.9
Q ss_pred cCCeeeccCCCccccccCCCCccccccccCceeeCCCCccc
Q 021975 57 EGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (304)
Q Consensus 57 ~~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (304)
..+...||.|+..+.. +.+.|..||+..
T Consensus 11 ~~~k~iCpkC~a~~~~-------------gaw~CrKCG~~~ 38 (51)
T 3j21_g 11 IFKKYVCLRCGATNPW-------------GAKKCRKCGYKR 38 (51)
T ss_dssp SSSEEECTTTCCEECT-------------TCSSCSSSSSCC
T ss_pred HhCCccCCCCCCcCCC-------------CceecCCCCCcc
Confidence 3466889999998533 789999999863
No 387
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=90.99 E-value=2 Score=37.54 Aligned_cols=79 Identities=15% Similarity=0.221 Sum_probs=56.4
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC---
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 234 (304)
.+++||-.|++.|- +...|++.|. +|++++.++..++.+.+.+...+ ...++.++.+|+.+.. +.
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGC--KVAIADIRQDSIDKALATLEAEG--SGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 46789999987663 4566666676 99999999988887777666544 2247899999997742 00
Q ss_pred --CCccceEEecchhc
Q 021975 235 --SGFVDAVHAGAALH 248 (304)
Q Consensus 235 --~~~fD~V~~~~vl~ 248 (304)
-+.+|+++.+..+.
T Consensus 83 ~~~g~id~lv~nAg~~ 98 (319)
T 3ioy_A 83 ARFGPVSILCNNAGVN 98 (319)
T ss_dssp HHTCCEEEEEECCCCC
T ss_pred HhCCCCCEEEECCCcC
Confidence 14689999876643
No 388
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=90.99 E-value=1.3 Score=39.31 Aligned_cols=97 Identities=9% Similarity=-0.032 Sum_probs=62.5
Q ss_pred hhcccCC--CeEEEEcC--CccHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC---
Q 021975 161 YFKSAQG--GLLVDVSC--GSGLFSRKFAKSGTYS-GVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--- 232 (304)
Q Consensus 161 ~l~~~~~--~~vLDiGc--G~G~~~~~l~~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--- 232 (304)
.....++ .+||-.|+ |.|.....+++.. +. +|+++|.+++.++.+++.+ + .. ..+ |..+..
T Consensus 153 ~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~~---g----~~-~~~--d~~~~~~~~ 221 (357)
T 2zb4_A 153 KGHITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSEL---G----FD-AAI--NYKKDNVAE 221 (357)
T ss_dssp HSCCCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTS---C----CS-EEE--ETTTSCHHH
T ss_pred hcCCCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHc---C----Cc-eEE--ecCchHHHH
Confidence 3445567 89999998 4566666666654 34 8999999988777665422 2 11 122 222211
Q ss_pred ----CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 233 ----FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 233 ----~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
...+.+|+|+.... ...++...+.|++||++++...
T Consensus 222 ~~~~~~~~~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 222 QLRESCPAGVDVYFDNVG-------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp HHHHHCTTCEEEEEESCC-------HHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHhcCCCCCEEEECCC-------HHHHHHHHHHhccCcEEEEECC
Confidence 01126898887643 2568889999999999887654
No 389
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=90.90 E-value=2.6 Score=36.10 Aligned_cols=77 Identities=18% Similarity=0.182 Sum_probs=54.3
Q ss_pred CCCeEEEEcCCcc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCC-C----CC---
Q 021975 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-P----FA--- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~l-p----~~--- 234 (304)
.+++||=.|++.| .....|++.|. +|++++.++...+.+.+.+...+ ..++.++.+|+.+. . +.
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~~v~~~~~~~ 85 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGI--MVVLTCRDVTKGHEAVEKLKNSN---HENVVFHQLDVTDPIATMSSLADFI 85 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTT---CCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC---CCceEEEEccCCCcHHHHHHHHHHH
Confidence 3668888887755 24555666666 99999999988777777666543 35799999999875 2 00
Q ss_pred ---CCccceEEecchh
Q 021975 235 ---SGFVDAVHAGAAL 247 (304)
Q Consensus 235 ---~~~fD~V~~~~vl 247 (304)
-+.+|+++.+..+
T Consensus 86 ~~~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 86 KTHFGKLDILVNNAGV 101 (311)
T ss_dssp HHHHSSCCEEEECCCC
T ss_pred HHhCCCCCEEEECCcc
Confidence 1368999987654
No 390
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=90.84 E-value=0.71 Score=41.17 Aligned_cols=97 Identities=9% Similarity=-0.010 Sum_probs=61.2
Q ss_pred cccCCCeEEEEcC--CccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC------CC
Q 021975 163 KSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------FA 234 (304)
Q Consensus 163 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------~~ 234 (304)
...++.+||-.|+ |.|.....+++.. +.+|+++|.+++.++.+++. + ... .+..+-.+.. ..
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----g----~~~-~~~~~~~~~~~~~~~~~~ 228 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKL----G----AAA-GFNYKKEDFSEATLKFTK 228 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH----T----CSE-EEETTTSCHHHHHHHHTT
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc----C----CcE-EEecCChHHHHHHHHHhc
Confidence 4456889999984 4567666666653 34999999999888887542 1 111 2211111100 11
Q ss_pred CCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
...+|+|+....- + .+.+..+.|++||++++....
T Consensus 229 ~~~~d~vi~~~G~-----~--~~~~~~~~l~~~G~iv~~G~~ 263 (354)
T 2j8z_A 229 GAGVNLILDCIGG-----S--YWEKNVNCLALDGRWVLYGLM 263 (354)
T ss_dssp TSCEEEEEESSCG-----G--GHHHHHHHEEEEEEEEECCCT
T ss_pred CCCceEEEECCCc-----h--HHHHHHHhccCCCEEEEEecc
Confidence 2468998875432 1 477888999999998876543
No 391
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.57 E-value=2.1 Score=32.24 Aligned_cols=90 Identities=17% Similarity=0.132 Sum_probs=55.3
Q ss_pred CCeEEEEcCCc-cH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC----CCCCccce
Q 021975 167 GGLLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----FASGFVDA 240 (304)
Q Consensus 167 ~~~vLDiGcG~-G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----~~~~~fD~ 240 (304)
..+|+=+|+|. |. +...|.+.+. +|+++|.+++.++.+++ ..+.++.+|..+.. ..-..+|+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~--~V~~id~~~~~~~~~~~----------~~~~~~~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK--KVLAVDKSKEKIELLED----------EGFDAVIADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHH----------TTCEEEECCTTCHHHHHHSCCTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHH----------CCCcEEECCCCCHHHHHhCCcccCCE
Confidence 35789999864 33 3344445565 99999999988877765 34678888886632 12246788
Q ss_pred EEecchhccCCCHH--HHHHHHHHhcccCcEEEEEE
Q 021975 241 VHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 241 V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~lvi~~ 274 (304)
|+... ++.. ..+....+.+. ...++...
T Consensus 74 vi~~~-----~~~~~n~~~~~~a~~~~-~~~iia~~ 103 (141)
T 3llv_A 74 VLITG-----SDDEFNLKILKALRSVS-DVYAIVRV 103 (141)
T ss_dssp EEECC-----SCHHHHHHHHHHHHHHC-CCCEEEEE
T ss_pred EEEec-----CCHHHHHHHHHHHHHhC-CceEEEEE
Confidence 87643 2332 23444455555 45555444
No 392
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=90.35 E-value=0.74 Score=40.56 Aligned_cols=95 Identities=14% Similarity=0.121 Sum_probs=62.0
Q ss_pred cccCCCeEEEEcC--CccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC--------
Q 021975 163 KSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-------- 232 (304)
Q Consensus 163 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-------- 232 (304)
...++.+||-.|+ |.|.....+++.. +.+|+++|.+++.++.+++. + ... .+ |..+..
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~----g----~~~-~~--d~~~~~~~~~i~~~ 209 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKL----G----CHH-TI--NYSTQDFAEVVREI 209 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH----T----CSE-EE--ETTTSCHHHHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----C----CCE-EE--ECCCHHHHHHHHHH
Confidence 4456889999995 5677766666653 24999999999888777652 1 111 22 222211
Q ss_pred CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
.....+|+|+.... . ..++...+.|+++|+++.....
T Consensus 210 ~~~~~~d~vi~~~g-----~--~~~~~~~~~l~~~G~iv~~g~~ 246 (333)
T 1wly_A 210 TGGKGVDVVYDSIG-----K--DTLQKSLDCLRPRGMCAAYGHA 246 (333)
T ss_dssp HTTCCEEEEEECSC-----T--TTHHHHHHTEEEEEEEEECCCT
T ss_pred hCCCCCeEEEECCc-----H--HHHHHHHHhhccCCEEEEEecC
Confidence 11236899887543 1 3578889999999998876543
No 393
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=90.35 E-value=0.33 Score=43.38 Aligned_cols=98 Identities=16% Similarity=0.134 Sum_probs=58.8
Q ss_pred ccc-CCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEc-cCCCCCCCCCccc
Q 021975 163 KSA-QGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA-DVCRLPFASGFVD 239 (304)
Q Consensus 163 ~~~-~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~-d~~~lp~~~~~fD 239 (304)
... ++.+||-+|+|. |.+...+++.. +.+|+++|.+++..+.+++.+ + ... ++.. +...+.-..+.+|
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~l---G---a~~--vi~~~~~~~~~~~~~g~D 246 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDL---G---ADD--YVIGSDQAKMSELADSLD 246 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTS---C---CSC--EEETTCHHHHHHSTTTEE
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHc---C---Cce--eeccccHHHHHHhcCCCC
Confidence 344 688999999874 66777777652 239999999987776665322 1 111 1211 1000000013689
Q ss_pred eEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 240 AVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 240 ~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
+|+-.-.-. ..++...+.|+++|+++....
T Consensus 247 ~vid~~g~~------~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 247 YVIDTVPVH------HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp EEEECCCSC------CCSHHHHTTEEEEEEEEECSC
T ss_pred EEEECCCCh------HHHHHHHHHhccCCEEEEeCC
Confidence 888643211 125667889999999887654
No 394
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=90.35 E-value=0.17 Score=34.16 Aligned_cols=31 Identities=23% Similarity=0.682 Sum_probs=22.4
Q ss_pred CeeeccCCCccccccCCCCccccccccCceeeCCCCcccc
Q 021975 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYS 98 (304)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 98 (304)
....||.|+..-..... .+.|+|..|+..+.
T Consensus 25 ~ky~C~fCgk~~vkR~a---------~GIW~C~~C~~~~A 55 (72)
T 3jyw_9 25 ARYDCSFCGKKTVKRGA---------AGIWTCSCCKKTVA 55 (72)
T ss_dssp SCBCCSSCCSSCBSBCS---------SSCBCCSSSCCCCC
T ss_pred cCccCCCCCCceeEecC---------CCeEECCCCCCEEe
Confidence 45889999986433221 27999999998763
No 395
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=90.34 E-value=0.66 Score=41.81 Aligned_cols=97 Identities=24% Similarity=0.263 Sum_probs=62.9
Q ss_pred ccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEcc---CCC----C-C-C
Q 021975 164 SAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD---VCR----L-P-F 233 (304)
Q Consensus 164 ~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d---~~~----l-p-~ 233 (304)
..++.+||-+|+|. |.++..+++.....+|+++|.+++.++.+++. + .. .++..+ -.+ + . .
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----G----a~-~vi~~~~~~~~~~~~~v~~~~ 263 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI----G----AD-LTLNRRETSVEERRKAIMDIT 263 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT----T----CS-EEEETTTSCHHHHHHHHHHHT
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc----C----Cc-EEEeccccCcchHHHHHHHHh
Confidence 55688999999774 77777777764114999999999988888751 1 11 122211 000 0 0 1
Q ss_pred CCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
....+|+|+..-. . ...+++..+.|+++|+++....
T Consensus 264 ~g~g~Dvvid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 264 HGRGADFILEATG-----D-SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp TTSCEEEEEECSS-----C-TTHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCCcEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEec
Confidence 1236999886532 1 1357888999999999887654
No 396
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=90.24 E-value=0.95 Score=40.30 Aligned_cols=98 Identities=14% Similarity=0.041 Sum_probs=63.0
Q ss_pred hcccCCCeEEEEcC--CccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC
Q 021975 162 FKSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA 234 (304)
Q Consensus 162 l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~ 234 (304)
....++.+||-+|+ |.|.....+++.. +.+|+++|.+++.++.+++. + .. ..+..+-.+.. ..
T Consensus 163 ~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l----G----a~-~~~~~~~~~~~~~~~~~~ 232 (353)
T 4dup_A 163 AGLTEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERL----G----AK-RGINYRSEDFAAVIKAET 232 (353)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH----T----CS-EEEETTTSCHHHHHHHHH
T ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----C----CC-EEEeCCchHHHHHHHHHh
Confidence 34567889999953 3577777777763 34999999999988888762 1 11 12221111110 00
Q ss_pred CCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
.+.+|+|+....- ..+....+.|+++|++++....
T Consensus 233 ~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~~ 267 (353)
T 4dup_A 233 GQGVDIILDMIGA-------AYFERNIASLAKDGCLSIIAFL 267 (353)
T ss_dssp SSCEEEEEESCCG-------GGHHHHHHTEEEEEEEEECCCT
T ss_pred CCCceEEEECCCH-------HHHHHHHHHhccCCEEEEEEec
Confidence 2468998875432 2578888999999998876543
No 397
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.21 E-value=1.9 Score=36.76 Aligned_cols=103 Identities=20% Similarity=0.219 Sum_probs=67.7
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeCC------------HHHHHHHHHHHHhcCccCCCCeEEEEccCCC
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFS------------ENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s------------~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (304)
.++++|-.|++.|- ....|++.|. +|+.+|.+ ...++.+...+...+ .++.++.+|+.+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~ 82 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGA--DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG----RKAYTAEVDVRD 82 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT----SCEEEEECCTTC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcccccccccccchhhhHHHHHHHHHHHhcC----CceEEEEccCCC
Confidence 46789988887652 4556666776 99999987 666666665555543 678999999977
Q ss_pred CC-----CC-----CCccceEEecchhccCC---CHH--------------HHHHHHHHhcccCcEEEEEE
Q 021975 231 LP-----FA-----SGFVDAVHAGAALHCWP---SPS--------------NAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 231 lp-----~~-----~~~fD~V~~~~vl~h~~---d~~--------------~~l~~~~r~LkpgG~lvi~~ 274 (304)
.. +. -+..|+++.+..+.... +.+ .+++.+.+.++.+|.++...
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 42 10 13689999876543321 111 23566667777888877654
No 398
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=90.16 E-value=0.26 Score=43.03 Aligned_cols=56 Identities=21% Similarity=0.200 Sum_probs=38.9
Q ss_pred CCeEEEEccCCC-CC-CCCCccceEEecchhccCC--------------------CHHHHHHHHHHhcccCcEEEEEE
Q 021975 219 SNLALVRADVCR-LP-FASGFVDAVHAGAALHCWP--------------------SPSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 219 ~~i~~~~~d~~~-lp-~~~~~fD~V~~~~vl~h~~--------------------d~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
.++.++++|..+ +. +++++||+|++.--..... ....+++++.++|||||.+++..
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 456889999865 22 4578999999964322110 12346789999999999998764
No 399
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=90.15 E-value=0.31 Score=47.77 Aligned_cols=106 Identities=20% Similarity=0.212 Sum_probs=64.0
Q ss_pred CCCeEEEEcCCccHHHHHHHHhC-------C-----CCeEEEEeC---CHHHHHHHHH-----------HHHhcCc----
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSG-------T-----YSGVVALDF---SENMLRQCYD-----------FIKQDNT---- 215 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~-------~-----~~~v~giD~---s~~~~~~a~~-----------~~~~~~~---- 215 (304)
+.-+|+|+|.|+|.....+.+.. | ...++.+|. +.+.+..+.. .++....
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 34689999999999766554421 1 146899998 5554443321 1221110
Q ss_pred ----c---CCCCeEEEEccCCC-CC-CC---CCccceEEecchhccCCCH----HHHHHHHHHhcccCcEEEE
Q 021975 216 ----I---LTSNLALVRADVCR-LP-FA---SGFVDAVHAGAALHCWPSP----SNAVAEISRILRSGGVFVG 272 (304)
Q Consensus 216 ----~---~~~~i~~~~~d~~~-lp-~~---~~~fD~V~~~~vl~h~~d~----~~~l~~~~r~LkpgG~lvi 272 (304)
. ....++++.+|+.+ ++ +. +..+|+++....--. .+| ..++..+.++++|||.+..
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~-~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPA-KNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC---CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCC-CChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 0 01256777888743 22 21 467999998542111 122 5789999999999998664
No 400
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=90.11 E-value=1.6 Score=37.77 Aligned_cols=78 Identities=26% Similarity=0.264 Sum_probs=56.9
Q ss_pred cCCCeEEEEcCCcc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC--
Q 021975 165 AQGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (304)
Q Consensus 165 ~~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 234 (304)
..+++||-.|++.| .+...|++.|. +|+.++.++..++.+.+.++..+ .++.++.+|+.+.. +.
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA--RLVLSDVDQPALEQAVNGLRGQG----FDAHGVVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC----CceEEEEccCCCHHHHHHHHHHH
Confidence 35678999998766 24566666676 99999999998888877776544 67899999997742 00
Q ss_pred ---CCccceEEecchhc
Q 021975 235 ---SGFVDAVHAGAALH 248 (304)
Q Consensus 235 ---~~~fD~V~~~~vl~ 248 (304)
-+.+|+++.+..+.
T Consensus 103 ~~~~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 103 FRLLGGVDVVFSNAGIV 119 (301)
T ss_dssp HHHHSSCSEEEECCCCC
T ss_pred HHhCCCCCEEEECCCcC
Confidence 13689999876543
No 401
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=90.08 E-value=0.15 Score=35.36 Aligned_cols=14 Identities=43% Similarity=1.144 Sum_probs=9.8
Q ss_pred eeccCCCccccccC
Q 021975 61 FSCPICYEPLIRKG 74 (304)
Q Consensus 61 l~CP~C~~~l~~~~ 74 (304)
..||.|++++....
T Consensus 3 ~~CP~C~~~l~~~~ 16 (81)
T 2jrp_A 3 ITCPVCHHALERNG 16 (81)
T ss_dssp CCCSSSCSCCEECS
T ss_pred CCCCCCCCccccCC
Confidence 56888888776643
No 402
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.06 E-value=3.1 Score=32.82 Aligned_cols=92 Identities=13% Similarity=0.150 Sum_probs=57.1
Q ss_pred CCeEEEEcCCc-cH-HHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC----C-CCCcc
Q 021975 167 GGLLVDVSCGS-GL-FSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----F-ASGFV 238 (304)
Q Consensus 167 ~~~vLDiGcG~-G~-~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----~-~~~~f 238 (304)
+.+|+=+|+|. |. ....|.+. +. +|+++|.+++.++.+++ .++.++.+|..+.. . .-..+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~--~V~vid~~~~~~~~~~~----------~g~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK--ISLGIEIREEAAQQHRS----------EGRNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS--CEEEEESCHHHHHHHHH----------TTCCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC--eEEEEECCHHHHHHHHH----------CCCCEEEcCCCCHHHHHhccCCCCC
Confidence 55799999874 43 34455556 65 89999999988777654 24556777765421 1 13458
Q ss_pred ceEEecchhccCCCHH--HHHHHHHHhcccCcEEEEEEe
Q 021975 239 DAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 239 D~V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~lvi~~~ 275 (304)
|+|+..- ++.. ..+-...+.+.|++.++....
T Consensus 107 d~vi~~~-----~~~~~~~~~~~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 107 KLVLLAM-----PHHQGNQTALEQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp CEEEECC-----SSHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred CEEEEeC-----CChHHHHHHHHHHHHHCCCCEEEEEEC
Confidence 8888742 2332 223345566677777776543
No 403
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=89.85 E-value=0.52 Score=41.79 Aligned_cols=96 Identities=15% Similarity=0.066 Sum_probs=61.4
Q ss_pred hcccCCCeEEEEcCCc-cHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC
Q 021975 162 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYS-GVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA 234 (304)
Q Consensus 162 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~ 234 (304)
... ++.+||-+|+|. |.....+++.. +. +|+++|.+++.++.+++. . -.++...-.++. ..
T Consensus 161 ~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l--a--------~~v~~~~~~~~~~~~~~~~ 228 (343)
T 2dq4_A 161 SGV-SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY--A--------DRLVNPLEEDLLEVVRRVT 228 (343)
T ss_dssp TCC-TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT--C--------SEEECTTTSCHHHHHHHHH
T ss_pred CCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh--H--------HhccCcCccCHHHHHHHhc
Confidence 345 788999999864 77777777764 34 899999998877766541 1 112211111110 00
Q ss_pred CCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
...+|+|+..-. . ...+++..+.|+++|+++....
T Consensus 229 ~~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 229 GSGVEVLLEFSG-----N-EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp SSCEEEEEECSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCCEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEec
Confidence 236898886432 2 2457889999999999887654
No 404
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=89.81 E-value=3.1 Score=35.84 Aligned_cols=103 Identities=12% Similarity=0.169 Sum_probs=67.3
Q ss_pred CCCeEEEEcCCc----cH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC-
Q 021975 166 QGGLLVDVSCGS----GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~----G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~- 234 (304)
.++++|-.|++. |. ....|++.|. +|+.++.++...+.+.+..+.. .++.++.+|+.+.. +.
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 102 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGA--ELAFTYQGDALKKRVEPLAEEL-----GAFVAGHCDVADAASIDAVFET 102 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTC--EEEEEECSHHHHHHHHHHHHHH-----TCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhc-----CCceEEECCCCCHHHHHHHHHH
Confidence 467899999763 32 5566777776 8999999876555555544433 35789999997742 00
Q ss_pred ----CCccceEEecchhcc----C-----CCHH--------------HHHHHHHHhcccCcEEEEEEe
Q 021975 235 ----SGFVDAVHAGAALHC----W-----PSPS--------------NAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 235 ----~~~fD~V~~~~vl~h----~-----~d~~--------------~~l~~~~r~LkpgG~lvi~~~ 275 (304)
-+.+|+++.+..+.. . .+.+ .+++.+.+.++.+|.++....
T Consensus 103 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 103 LEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp HHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred HHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 146899998765432 0 1111 245667778888888887664
No 405
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=89.70 E-value=0.45 Score=41.36 Aligned_cols=94 Identities=17% Similarity=0.068 Sum_probs=59.2
Q ss_pred ccCCCeEEEEcC--CccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccC-CCCCCCCCccce
Q 021975 164 SAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV-CRLPFASGFVDA 240 (304)
Q Consensus 164 ~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~-~~lp~~~~~fD~ 240 (304)
..++.+||-+|+ |.|.....+++.. +.+|+++|.+++..+.+++. + .. .++..+- .++.-.-+.+|+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----g----a~-~~~~~~~~~~~~~~~~~~d~ 192 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLAL----G----AE-EAATYAEVPERAKAWGGLDL 192 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHT----T----CS-EEEEGGGHHHHHHHTTSEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc----C----CC-EEEECCcchhHHHHhcCceE
Confidence 456889999998 4577777777663 34999999998887777651 1 11 1221110 010000046899
Q ss_pred EEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 241 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 241 V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
|+. .. . ..++...+.|+++|+++....
T Consensus 193 vid-~g-----~--~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 193 VLE-VR-----G--KEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp EEE-CS-----C--TTHHHHHTTEEEEEEEEEC--
T ss_pred EEE-CC-----H--HHHHHHHHhhccCCEEEEEeC
Confidence 887 32 1 257888999999999887543
No 406
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=89.67 E-value=0.18 Score=34.14 Aligned_cols=32 Identities=31% Similarity=0.676 Sum_probs=23.9
Q ss_pred eeeccCCCccccccCCCCccccccccCceeeCCCCccccCCCC
Q 021975 60 LFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDN 102 (304)
Q Consensus 60 ~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g 102 (304)
++.|| |+......... ....|+ ||.....++.
T Consensus 4 vv~C~-C~~~~~~~~~~---------kT~~C~-CG~~~~~~k~ 35 (71)
T 1gh9_A 4 IFRCD-CGRALYSREGA---------KTRKCV-CGRTVNVKDR 35 (71)
T ss_dssp EEEET-TSCCEEEETTC---------SEEEET-TTEEEECCSS
T ss_pred EEECC-CCCEEEEcCCC---------cEEECC-CCCeeeeceE
Confidence 57899 99987665532 578999 9998766543
No 407
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=89.54 E-value=1.8 Score=36.52 Aligned_cols=101 Identities=21% Similarity=0.307 Sum_probs=66.4
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCC--------
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA-------- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~-------- 234 (304)
.++++|-.|++.|- ....|++.|. +|+.+|.++..++...+.+ ..++.++.+|+.+..--
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGA--EVLLTGRNESNIARIREEF-------GPRVHALRSDIADLNEIAVLGAAAG 77 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh-------CCcceEEEccCCCHHHHHHHHHHHH
Confidence 46789988887652 4556666676 9999999988776665543 24688999999774200
Q ss_pred --CCccceEEecchhccCC-----CHH--------------HHHHHHHHhcccCcEEEEEEe
Q 021975 235 --SGFVDAVHAGAALHCWP-----SPS--------------NAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 235 --~~~fD~V~~~~vl~h~~-----d~~--------------~~l~~~~r~LkpgG~lvi~~~ 275 (304)
-+.+|+++.+..+.... +++ .+.+.+...++.+|.++...-
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 139 (255)
T 4eso_A 78 QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS 139 (255)
T ss_dssp HHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence 13689988875543321 111 235566667777888776553
No 408
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=89.53 E-value=0.9 Score=40.26 Aligned_cols=95 Identities=14% Similarity=0.013 Sum_probs=62.1
Q ss_pred hhcccCCCeEEEEcC-C-ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC------
Q 021975 161 YFKSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------ 232 (304)
Q Consensus 161 ~l~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp------ 232 (304)
.....++.+||-+|+ | .|.....+++.. +.+|+++ .+++.++.+++. + . ..+. +-.+..
T Consensus 145 ~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~l----G----a--~~i~-~~~~~~~~~~~~ 211 (343)
T 3gaz_A 145 RAQVQDGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRDL----G----A--TPID-ASREPEDYAAEH 211 (343)
T ss_dssp TTCCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHHH----T----S--EEEE-TTSCHHHHHHHH
T ss_pred hcCCCCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHHc----C----C--CEec-cCCCHHHHHHHH
Confidence 344567889999994 3 477777777763 3499999 788887777652 2 1 2222 222211
Q ss_pred CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
.....+|+|+..-. . ..+....+.|+++|.++....
T Consensus 212 ~~~~g~D~vid~~g-----~--~~~~~~~~~l~~~G~iv~~g~ 247 (343)
T 3gaz_A 212 TAGQGFDLVYDTLG-----G--PVLDASFSAVKRFGHVVSCLG 247 (343)
T ss_dssp HTTSCEEEEEESSC-----T--HHHHHHHHHEEEEEEEEESCC
T ss_pred hcCCCceEEEECCC-----c--HHHHHHHHHHhcCCeEEEEcc
Confidence 11246998886432 2 468888999999999887543
No 409
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=89.44 E-value=0.55 Score=42.11 Aligned_cols=95 Identities=18% Similarity=0.185 Sum_probs=57.8
Q ss_pred CCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccC-CCCCCCCCccceEEe
Q 021975 166 QGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV-CRLPFASGFVDAVHA 243 (304)
Q Consensus 166 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~-~~lp~~~~~fD~V~~ 243 (304)
++.+||-+|+|. |.....+++.. +.+|+++|.+++..+.+++.+ + .. .++...- ..+.-..+.+|+|+.
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~l---G----a~-~v~~~~~~~~~~~~~~~~D~vid 257 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNF---G----AD-SFLVSRDQEQMQAAAGTLDGIID 257 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTS---C----CS-EEEETTCHHHHHHTTTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhc---C----Cc-eEEeccCHHHHHHhhCCCCEEEE
Confidence 688999999864 66677777663 349999999988777665322 1 11 1221110 000000136899887
Q ss_pred cchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 244 GAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 244 ~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
.-.... .++...+.|+++|+++....
T Consensus 258 ~~g~~~------~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 258 TVSAVH------PLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp CCSSCC------CSHHHHHHEEEEEEEEECCC
T ss_pred CCCcHH------HHHHHHHHHhcCCEEEEEcc
Confidence 543211 25667789999999887654
No 410
>1tfi_A Transcriptional elongation factor SII; transcription regulation; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=89.39 E-value=0.16 Score=31.91 Aligned_cols=40 Identities=18% Similarity=0.376 Sum_probs=23.5
Q ss_pred CCeeeccCCCccccc-cCCCCccccccccCceeeCCCCccc
Q 021975 58 GDLFSCPICYEPLIR-KGPTGLTLGAIYRSGFKCRKCDKTY 97 (304)
Q Consensus 58 ~~~l~CP~C~~~l~~-~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (304)
.....||.|+..-.. ...+.-+.++-+.-.+.|.+|++.+
T Consensus 7 t~~~~Cp~Cg~~~a~f~q~Q~RsaDE~mT~Fy~C~~Cg~~w 47 (50)
T 1tfi_A 7 TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 47 (50)
T ss_dssp CCCSCCSSSCSSCEEEEEECSSSSSSCCEEEEEESSSCCEE
T ss_pred eCccCCCCCCCCEEEEEEecCcCCCCCceEEEEcCCCCCeE
Confidence 456789999985321 0001112233344678999999875
No 411
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=89.35 E-value=3 Score=35.86 Aligned_cols=103 Identities=17% Similarity=0.260 Sum_probs=65.6
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC--
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSEN-MLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~-~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 234 (304)
.++++|-.|++.|- ....|++.|. +|+.++.+.. ..+...+..+..+ .++.++.+|+.+.. +.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGA--NIAIAYLDEEGDANETKQYVEKEG----VKCVLLPGDLSDEQHCKDIVQET 119 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHTTT----CCEEEEESCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhcC----CcEEEEECCCCCHHHHHHHHHHH
Confidence 46789999887652 4556666676 9999998765 3444444444433 67899999997742 10
Q ss_pred ---CCccceEEecchhccCC------CHH--------------HHHHHHHHhcccCcEEEEEE
Q 021975 235 ---SGFVDAVHAGAALHCWP------SPS--------------NAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 235 ---~~~fD~V~~~~vl~h~~------d~~--------------~~l~~~~r~LkpgG~lvi~~ 274 (304)
-+.+|+++.+....+.. +.+ .+++.+.+.++.+|.++...
T Consensus 120 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 120 VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 13689998875433211 111 24567777888888877654
No 412
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=89.12 E-value=3 Score=35.04 Aligned_cols=78 Identities=23% Similarity=0.332 Sum_probs=55.9
Q ss_pred CCCeEEEEcC-Ccc--H-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC--
Q 021975 166 QGGLLVDVSC-GSG--L-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (304)
Q Consensus 166 ~~~~vLDiGc-G~G--~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 234 (304)
.++++|=.|+ |.| . +...|++.+. +|+.++.+...++...+.++..+ ..++.++.+|+.+.. +.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGA--DVVISDYHERRLGETRDQLADLG---LGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTC---SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhcC---CCceEEEEeCCCCHHHHHHHHHHH
Confidence 4678999987 554 3 4566777776 99999999988877777665443 367999999997742 10
Q ss_pred ---CCccceEEecchhc
Q 021975 235 ---SGFVDAVHAGAALH 248 (304)
Q Consensus 235 ---~~~fD~V~~~~vl~ 248 (304)
-+.+|+++.+..+.
T Consensus 96 ~~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGLG 112 (266)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHhCCCcEEEECCCcC
Confidence 13689999876643
No 413
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=89.11 E-value=3.6 Score=34.77 Aligned_cols=105 Identities=22% Similarity=0.284 Sum_probs=68.0
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC--
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDF-SENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~-s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 234 (304)
.++++|-.|++.|- ....|++.|. +|+.++. +....+...+.++..+ .++.++.+|+.+.. +.
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~ 90 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGA--KVVVNYANSTKDAEKVVSEIKALG----SDAIAIKADIRQVPEIVKLFDQA 90 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT----CCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC----CcEEEEEcCCCCHHHHHHHHHHH
Confidence 46788888877652 4556666676 8988775 4555555555555543 67899999997742 10
Q ss_pred ---CCccceEEecchhccCC-----CHH--------------HHHHHHHHhcccCcEEEEEEeC
Q 021975 235 ---SGFVDAVHAGAALHCWP-----SPS--------------NAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 235 ---~~~fD~V~~~~vl~h~~-----d~~--------------~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
-+..|+++.+..+.+.. +++ .+.+.+.+.++.+|.++...-.
T Consensus 91 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 154 (270)
T 3is3_A 91 VAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN 154 (270)
T ss_dssp HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence 13689999876543322 111 2457778888888988776543
No 414
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=89.07 E-value=0.46 Score=46.38 Aligned_cols=106 Identities=16% Similarity=0.105 Sum_probs=63.8
Q ss_pred CCeEEEEcCCccHHHHHHHHh-------CC-----CCeEEEEeC---CHHHHHHHHHH-----------HHhcCcc----
Q 021975 167 GGLLVDVSCGSGLFSRKFAKS-------GT-----YSGVVALDF---SENMLRQCYDF-----------IKQDNTI---- 216 (304)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~-------~~-----~~~v~giD~---s~~~~~~a~~~-----------~~~~~~~---- 216 (304)
.-+|||+|-|+|......... .| ...++++|. +.+.+..+... .+.....
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 458999999999875554332 11 245899998 77776644331 1111100
Q ss_pred -------CCCCeEEEEccCCC-CC-CC---CCccceEEecchhccCCCH----HHHHHHHHHhcccCcEEEEE
Q 021975 217 -------LTSNLALVRADVCR-LP-FA---SGFVDAVHAGAALHCWPSP----SNAVAEISRILRSGGVFVGT 273 (304)
Q Consensus 217 -------~~~~i~~~~~d~~~-lp-~~---~~~fD~V~~~~vl~h~~d~----~~~l~~~~r~LkpgG~lvi~ 273 (304)
....+++..+|+.+ ++ +. +..||+|+.... ---.+| ..++..+.++++|||.+...
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f-~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 218 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGF-APAKNPDMWTQNLFNAMARLARPGGTLATF 218 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCS-CGGGCGGGSCHHHHHHHHHHEEEEEEEEES
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCC-CCcCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 01334566677643 22 11 467999988542 111233 47899999999999987643
No 415
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=88.84 E-value=2 Score=36.23 Aligned_cols=105 Identities=15% Similarity=0.259 Sum_probs=68.1
Q ss_pred CCCeEEEEcCC----ccH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC-
Q 021975 166 QGGLLVDVSCG----SGL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA- 234 (304)
Q Consensus 166 ~~~~vLDiGcG----~G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~- 234 (304)
.++++|-.|++ .|. ....|++.|. +|+.++.+....+.+.+..+..+ ..++.++.+|+.+.. +.
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~ 80 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA--RLIFTYAGERLEKSVHELAGTLD---RNDSIILPCDVTNDAEIETCFAS 80 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHTSS---SCCCEEEECCCSSSHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEecCchHHHHHHHHHHHhcC---CCCceEEeCCCCCHHHHHHHHHH
Confidence 46789999976 333 5667777776 99999988766666655555443 237899999998743 10
Q ss_pred ----CCccceEEecchhcc----C-----CCHH--------------HHHHHHHHhcccCcEEEEEEe
Q 021975 235 ----SGFVDAVHAGAALHC----W-----PSPS--------------NAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 235 ----~~~fD~V~~~~vl~h----~-----~d~~--------------~~l~~~~r~LkpgG~lvi~~~ 275 (304)
-+.+|+++.+..+.+ . .+.. .+++.+...++++|.++....
T Consensus 81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 136898888655432 0 1121 245666777788888877664
No 416
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=88.79 E-value=0.89 Score=39.89 Aligned_cols=95 Identities=15% Similarity=0.095 Sum_probs=58.5
Q ss_pred cCCC-eEEEEcC--CccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccC-CC--CCCCCCcc
Q 021975 165 AQGG-LLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV-CR--LPFASGFV 238 (304)
Q Consensus 165 ~~~~-~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~-~~--lp~~~~~f 238 (304)
.++. +||-+|+ |.|.....+++.. +.++++++.+++.++.+++. + ....+-..+. .. .....+.+
T Consensus 147 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~l----G----a~~~i~~~~~~~~~~~~~~~~~~ 217 (328)
T 1xa0_A 147 TPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVL----G----AKEVLAREDVMAERIRPLDKQRW 217 (328)
T ss_dssp CGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHT----T----CSEEEECC---------CCSCCE
T ss_pred CCCCceEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHc----C----CcEEEecCCcHHHHHHHhcCCcc
Confidence 3453 7999997 4577777777763 34899999998877777651 2 1111111111 00 01123468
Q ss_pred ceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 239 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 239 D~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
|+|+..-. . ..+....+.|+++|++++...
T Consensus 218 d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 218 AAAVDPVG-----G--RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp EEEEECST-----T--TTHHHHHHTEEEEEEEEECSC
T ss_pred cEEEECCc-----H--HHHHHHHHhhccCCEEEEEee
Confidence 98876432 2 247788899999999887654
No 417
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=88.68 E-value=3.6 Score=34.93 Aligned_cols=78 Identities=18% Similarity=0.309 Sum_probs=53.9
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeC-------------CHHHHHHHHHHHHhcCccCCCCeEEEEccCC
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDF-------------SENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~-------------s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~ 229 (304)
.++++|-.|++.|- ....|++.|. +|+.+|. +...++...+.+...+ .++.++.+|+.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~ 83 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGA--DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN----RRIVAAVVDTR 83 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT----CCEEEEECCTT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCC--EEEEEeccccccccccccccCHHHHHHHHHHHHhcC----CeEEEEECCCC
Confidence 46789988887662 4566667776 9999998 6666666666555543 67899999997
Q ss_pred CCC-----CC-----CCccceEEecchhcc
Q 021975 230 RLP-----FA-----SGFVDAVHAGAALHC 249 (304)
Q Consensus 230 ~lp-----~~-----~~~fD~V~~~~vl~h 249 (304)
+.. +. -+..|+++.+..+..
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~ 113 (277)
T 3tsc_A 84 DFDRLRKVVDDGVAALGRLDIIVANAGVAA 113 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 742 11 146899998765543
No 418
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=88.63 E-value=2.3 Score=39.20 Aligned_cols=96 Identities=16% Similarity=0.214 Sum_probs=63.0
Q ss_pred cccCCCeEEEEcC-C-ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC--------
Q 021975 163 KSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-------- 232 (304)
Q Consensus 163 ~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-------- 232 (304)
...++.+||-+|+ | .|.+...+++.. +.++++++.+++-++.+++. + .. .++...-.+..
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~l----G----a~-~vi~~~~~d~~~~~~~~~~ 294 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRAM----G----AE-AIIDRNAEGYRFWKDENTQ 294 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH----T----CC-EEEETTTTTCCSEEETTEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHhh----C----Cc-EEEecCcCccccccccccc
Confidence 4457889999997 4 477777777763 34999999999888888662 1 11 12221111110
Q ss_pred ---------------CCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 233 ---------------FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 233 ---------------~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
.....+|+|+-.-. ...+....+.|++||++++...
T Consensus 295 ~~~~~~~~~~~i~~~t~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~G~ 345 (456)
T 3krt_A 295 DPKEWKRFGKRIRELTGGEDIDIVFEHPG-------RETFGASVFVTRKGGTITTCAS 345 (456)
T ss_dssp CHHHHHHHHHHHHHHHTSCCEEEEEECSC-------HHHHHHHHHHEEEEEEEEESCC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEEcCC-------chhHHHHHHHhhCCcEEEEEec
Confidence 01247898886432 2468889999999999987643
No 419
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=88.49 E-value=0.99 Score=39.68 Aligned_cols=97 Identities=14% Similarity=0.228 Sum_probs=64.9
Q ss_pred eEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCC-CCccceEEecchh
Q 021975 169 LLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA-SGFVDAVHAGAAL 247 (304)
Q Consensus 169 ~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~-~~~fD~V~~~~vl 247 (304)
+|||+=||.|.+..-+.+.|. .-+.++|+++.+++.-+.+. .-.++.+|+.++... -..+|+++...-.
T Consensus 2 kvidLFsG~GG~~~G~~~aG~-~~v~a~e~d~~a~~ty~~N~---------~~~~~~~DI~~i~~~~~~~~D~l~ggpPC 71 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGF-RIICANEYDKSIWKTYESNH---------SAKLIKGDISKISSDEFPKCDGIIGGPPS 71 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTC-EEEEEEECCTTTHHHHHHHC---------CSEEEESCGGGCCGGGSCCCSEEECCCCG
T ss_pred eEEEeCcCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHHC---------CCCcccCChhhCCHhhCCcccEEEecCCC
Confidence 699999999999999999874 46779999999888877753 235778898776421 1358999875432
Q ss_pred cc---------CCCHH-HHHH---HHHHhcccCcEEEEEEeCC
Q 021975 248 HC---------WPSPS-NAVA---EISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 248 ~h---------~~d~~-~~l~---~~~r~LkpgG~lvi~~~~~ 277 (304)
.. ..|+. .++. ++.+.++|. +++.+...
T Consensus 72 Q~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk--~~~~ENV~ 112 (331)
T 3ubt_Y 72 QSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPI--FFLAENVK 112 (331)
T ss_dssp GGTEETTEECCTTCGGGHHHHHHHHHHHHHCCS--EEEEEECC
T ss_pred CCcCCCCCccCCCCchhHHHHHHHHHHhccCCe--EEEeeeec
Confidence 22 23543 2333 344556784 45555443
No 420
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=88.46 E-value=3.6 Score=34.65 Aligned_cols=104 Identities=15% Similarity=0.233 Sum_probs=63.1
Q ss_pred CCeEEEEcCCcc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC----
Q 021975 167 GGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA---- 234 (304)
Q Consensus 167 ~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~---- 234 (304)
++++|-.|++.| .....|++.|. +|+.++.++...+...+.+.... ...++.++.+|+.+.. +.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGA--KVALVDWNLEAGVQCKAALHEQF--EPQKTLFIQCDVADQQQLRDTFRKVVD 82 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTTTS--CGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhc--CCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 567888887654 24455666666 99999999876665554443321 1246888999987632 10
Q ss_pred -CCccceEEecchhccCCCHHH-----------HHHHHHHhccc-----CcEEEEEE
Q 021975 235 -SGFVDAVHAGAALHCWPSPSN-----------AVAEISRILRS-----GGVFVGTT 274 (304)
Q Consensus 235 -~~~fD~V~~~~vl~h~~d~~~-----------~l~~~~r~Lkp-----gG~lvi~~ 274 (304)
-+.+|+++.+..+....+... ..+.+.+.++. +|.++...
T Consensus 83 ~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~is 139 (267)
T 2gdz_A 83 HFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMS 139 (267)
T ss_dssp HHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred HcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeC
Confidence 135799998776544344432 23445555543 57766554
No 421
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=88.36 E-value=3.9 Score=34.74 Aligned_cols=104 Identities=18% Similarity=0.198 Sum_probs=67.1
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeCC-HHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC--
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFS-ENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s-~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 234 (304)
.++++|-.|++.|- ....|++.|. +|+.++.. ....+...+.++..+ .++.++.+|+.+.. +.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~Dv~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGA--AVALTYVNAAERAQAVVSEIEQAG----GRAVAIRADNRDAEAIEQAIRET 103 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC----CcEEEEECCCCCHHHHHHHHHHH
Confidence 46789999987652 4566666776 89888654 455555555555443 67889999997742 10
Q ss_pred ---CCccceEEecchhccCC-----CHH--------------HHHHHHHHhcccCcEEEEEEe
Q 021975 235 ---SGFVDAVHAGAALHCWP-----SPS--------------NAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 235 ---~~~fD~V~~~~vl~h~~-----d~~--------------~~l~~~~r~LkpgG~lvi~~~ 275 (304)
-+..|+++.+..+.+.. +++ .+++.+.+.|+.+|.++...-
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 104 VEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 13689999876543321 111 246777788888888777653
No 422
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=88.24 E-value=2.6 Score=36.35 Aligned_cols=104 Identities=17% Similarity=0.183 Sum_probs=66.3
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeCC--HHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC-
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFS--ENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s--~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~- 234 (304)
.++++|-.|++.|- ....|++.|. +|+.++.+ ....+...+.++..+ .++.++.+|+.+.. +.
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~ 121 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGA--DVAINYLPAEEEDAQQVKALIEECG----RKAVLLPGDLSDESFARSLVHK 121 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECCGGGHHHHHHHHHHHHHTT----CCEEECCCCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchhHHHHHHHHHHHcC----CcEEEEEecCCCHHHHHHHHHH
Confidence 46789999877652 4556666676 89999886 344555555454443 67889999987742 00
Q ss_pred ----CCccceEEecchhccC-C-----CHH--------------HHHHHHHHhcccCcEEEEEEe
Q 021975 235 ----SGFVDAVHAGAALHCW-P-----SPS--------------NAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 235 ----~~~fD~V~~~~vl~h~-~-----d~~--------------~~l~~~~r~LkpgG~lvi~~~ 275 (304)
-+.+|+++.+..+... . +++ .+++.+.+.++.+|.++...-
T Consensus 122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 1468999987654321 1 111 245666777888888777654
No 423
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=88.21 E-value=0.33 Score=42.97 Aligned_cols=57 Identities=18% Similarity=0.114 Sum_probs=40.6
Q ss_pred CCeEEEEccCCC-CC-CCCCccceEEecchhccC--------------CCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 219 SNLALVRADVCR-LP-FASGFVDAVHAGAALHCW--------------PSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 219 ~~i~~~~~d~~~-lp-~~~~~fD~V~~~~vl~h~--------------~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
....++++|... +. +++++||+|++.--.... ......++++.++|||||.+++..-
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEEC
Confidence 457888898754 33 557899999996332111 1245788999999999999988653
No 424
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=88.07 E-value=0.16 Score=35.26 Aligned_cols=31 Identities=23% Similarity=0.726 Sum_probs=22.2
Q ss_pred CeeeccCCCccccccCCCCccccccccCceeeCCCCcccc
Q 021975 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYS 98 (304)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 98 (304)
....||.|+..-.... -.+.|.|..|+..+.
T Consensus 34 ~ky~CpfCGk~~vkR~---------a~GIW~C~kCg~~~A 64 (83)
T 3j21_i 34 QKHTCPVCGRKAVKRI---------STGIWQCQKCGATFA 64 (83)
T ss_dssp SCBCCSSSCSSCEEEE---------ETTEEEETTTCCEEE
T ss_pred cccCCCCCCCceeEec---------CcCeEEcCCCCCEEe
Confidence 4588999999643211 127999999998763
No 425
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=88.05 E-value=5.1 Score=34.50 Aligned_cols=76 Identities=21% Similarity=0.300 Sum_probs=53.1
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeCC------------HHHHHHHHHHHHhcCccCCCCeEEEEccCCC
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFS------------ENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s------------~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (304)
.++++|-.|++.|- ....|++.|. +|+.+|.+ ++.++...+.++..+ .++.++.+|+.+
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~ 100 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGA--DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG----RRIIASQVDVRD 100 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT----CCEEEEECCTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEecccccccccccccCHHHHHHHHHHHHhcC----CceEEEECCCCC
Confidence 46789999987762 4566666776 99999987 666666655555544 678999999977
Q ss_pred CC-----CC-----CCccceEEecchh
Q 021975 231 LP-----FA-----SGFVDAVHAGAAL 247 (304)
Q Consensus 231 lp-----~~-----~~~fD~V~~~~vl 247 (304)
.. +. -+..|+++.+..+
T Consensus 101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 101 FDAMQAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 42 10 1468999887654
No 426
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=87.93 E-value=3.3 Score=35.17 Aligned_cols=78 Identities=19% Similarity=0.244 Sum_probs=57.8
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC----------
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---------- 232 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---------- 232 (304)
+++++|--|++.|- ....|++.|. +|+..|.+++.++...+.+...+ .++..+.+|+.+..
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga--~Vvi~~~~~~~~~~~~~~l~~~g----~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA--RVILNDIRATLLAESVDTLTRKG----YDAHGVAFDVTDELAIEAAFSKLD 81 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHHHTT----CCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC----CcEEEEEeeCCCHHHHHHHHHHHH
Confidence 47788888877763 4566666776 99999999998888877777665 67889999987732
Q ss_pred CCCCccceEEecchhcc
Q 021975 233 FASGFVDAVHAGAALHC 249 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~h 249 (304)
-.-+..|+++.+..+.+
T Consensus 82 ~~~G~iDiLVNNAG~~~ 98 (255)
T 4g81_D 82 AEGIHVDILINNAGIQY 98 (255)
T ss_dssp HTTCCCCEEEECCCCCC
T ss_pred HHCCCCcEEEECCCCCC
Confidence 11357899998766544
No 427
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=87.82 E-value=1.1 Score=37.70 Aligned_cols=102 Identities=10% Similarity=0.050 Sum_probs=62.3
Q ss_pred CCCeEEEEcCCccHHHH----HHHH-hCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC-
Q 021975 166 QGGLLVDVSCGSGLFSR----KFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~----~l~~-~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~- 234 (304)
++++||=.|++ |..+. .|++ .+. +|++++.++...+...+.+...+ .++.++.+|+.+.. +.
T Consensus 3 ~~k~vlITGas-ggIG~~~a~~L~~~~g~--~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dl~~~~~~~~~~~~ 75 (276)
T 1wma_A 3 GIHVALVTGGN-KGIGLAIVRDLCRLFSG--DVVLTARDVTRGQAAVQQLQAEG----LSPRFHQLDIDDLQSIRALRDF 75 (276)
T ss_dssp CCCEEEESSCS-SHHHHHHHHHHHHHSSS--EEEEEESSHHHHHHHHHHHHHTT----CCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHhcCC--eEEEEeCChHHHHHHHHHHHhcC----CeeEEEECCCCCHHHHHHHHHH
Confidence 35678877754 44444 4445 555 99999999877766666555433 56889999997742 00
Q ss_pred ----CCccceEEecchhccCC----C-HH--------------HHHHHHHHhcccCcEEEEEE
Q 021975 235 ----SGFVDAVHAGAALHCWP----S-PS--------------NAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 235 ----~~~fD~V~~~~vl~h~~----d-~~--------------~~l~~~~r~LkpgG~lvi~~ 274 (304)
-+.+|+|+......... . .. .+++.+.+.++++|.++...
T Consensus 76 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 76 LRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp HHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 12689988765432211 1 11 23455666666677777654
No 428
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=87.52 E-value=0.9 Score=42.54 Aligned_cols=73 Identities=16% Similarity=0.201 Sum_probs=51.7
Q ss_pred HHHHHHHHhhccc------CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEc
Q 021975 153 EEFKMAQEYFKSA------QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA 226 (304)
Q Consensus 153 ~~~~~l~~~l~~~------~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~ 226 (304)
.+...+..+++.. ...+++|+=||.|.+..-+.+.|. ..+.++|+++.+++.-+.++.. .+...++.+
T Consensus 68 ~~~~~l~~~~~~~p~~~~~~~~~viDLFaG~GGlslG~~~aG~-~~v~avE~d~~A~~ty~~N~~~-----~p~~~~~~~ 141 (482)
T 3me5_A 68 KEFAHLQTLLPKPPEHHPHYAFRFIDLFAGIGGIRRGFESIGG-QCVFTSEWNKHAVRTYKANHYC-----DPATHHFNE 141 (482)
T ss_dssp HHHHHHHTTSCCCCTTTTCCSEEEEEESCTTSHHHHHHHTTTE-EEEEEECCCHHHHHHHHHHSCC-----CTTTCEEES
T ss_pred HHHHHHHhhCCCCCccCCCccceEEEecCCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHhccc-----CCCcceecc
Confidence 3445566555532 235799999999999999998874 3588999999988877776421 134456778
Q ss_pred cCCCC
Q 021975 227 DVCRL 231 (304)
Q Consensus 227 d~~~l 231 (304)
|+.++
T Consensus 142 DI~~i 146 (482)
T 3me5_A 142 DIRDI 146 (482)
T ss_dssp CTHHH
T ss_pred chhhh
Confidence 87654
No 429
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=87.49 E-value=1.4 Score=41.30 Aligned_cols=92 Identities=12% Similarity=0.047 Sum_probs=56.6
Q ss_pred ccCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEE
Q 021975 164 SAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 242 (304)
Q Consensus 164 ~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~ 242 (304)
...+.+|+=+|+|. |......++.. +.+|+++|.++...+.+++ .++.+ .++.+. + ...|+|+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~~----------~Ga~~--~~l~e~-l--~~aDvVi 334 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAMM----------EGFDV--VTVEEA-I--GDADIVV 334 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH----------TTCEE--CCHHHH-G--GGCSEEE
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----------cCCEE--ecHHHH-H--hCCCEEE
Confidence 34688999999975 55444444442 3499999999987776654 12232 122221 1 3579888
Q ss_pred ecchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 243 AGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 243 ~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
..-.-.++- -.+..+.||+||+++.....
T Consensus 335 ~atgt~~~i-----~~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 335 TATGNKDII-----MLEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp ECSSSSCSB-----CHHHHHHSCTTCEEEECSSS
T ss_pred ECCCCHHHH-----HHHHHHhcCCCcEEEEeCCC
Confidence 753222221 13567789999988766543
No 430
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.34 E-value=0.34 Score=43.89 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=56.3
Q ss_pred cCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEe
Q 021975 165 AQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (304)
Q Consensus 165 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (304)
.++.+|+=+|+|. |......++.. +.+|+++|.++..++.+++.+. ..+.....+..++.-.-...|+|+.
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~~g-------~~~~~~~~~~~~l~~~l~~aDvVi~ 237 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAEFC-------GRIHTRYSSAYELEGAVKRADLVIG 237 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTT-------TSSEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhcC-------CeeEeccCCHHHHHHHHcCCCEEEE
Confidence 4578999999964 44444444432 3399999999988777765321 1111111111111000125798887
Q ss_pred cchhccCCCHHHHHHHHHHhcccCcEEEEEE
Q 021975 244 GAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 244 ~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
.-.......+.-+.++..+.+||||+++-..
T Consensus 238 ~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 238 AVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 4322111111222466778899999887655
No 431
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=87.13 E-value=0.21 Score=36.92 Aligned_cols=30 Identities=30% Similarity=0.755 Sum_probs=22.1
Q ss_pred CeeeccCCCcc-ccccCCCCccccccccCceeeCCCCcccc
Q 021975 59 DLFSCPICYEP-LIRKGPTGLTLGAIYRSGFKCRKCDKTYS 98 (304)
Q Consensus 59 ~~l~CP~C~~~-l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 98 (304)
....||.|+.. +.+.. .+.|.|..|+..+.
T Consensus 59 akytCPfCGk~~vKR~a----------vGIW~C~~Cgk~fA 89 (116)
T 3cc2_Z 59 EDHACPNCGEDRVDRQG----------TGIWQCSYCDYKFT 89 (116)
T ss_dssp SCEECSSSCCEEEEEEE----------TTEEEETTTCCEEE
T ss_pred cCCcCCCCCCceeEecC----------ceeEECCCCCCEEE
Confidence 56899999984 33322 27899999998763
No 432
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=87.07 E-value=0.79 Score=41.88 Aligned_cols=99 Identities=18% Similarity=0.174 Sum_probs=58.2
Q ss_pred cCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCC-------------C
Q 021975 165 AQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC-------------R 230 (304)
Q Consensus 165 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~-------------~ 230 (304)
.++.+|+=+|+|. |.....++... +.+|+++|.++..++.+++. +..++..+.. .
T Consensus 188 v~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~~----------G~~~~~~~~~~~~d~~~~~~ya~e 256 (405)
T 4dio_A 188 VPAAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRPAAKEQVASL----------GAKFIAVEDEEFKAAETAGGYAKE 256 (405)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSTTHHHHHHHT----------TCEECCCCC---------------
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHc----------CCceeecccccccccccccchhhh
Confidence 3578999999985 55555555542 34999999999887777651 1222221110 0
Q ss_pred CC----------CC--CCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEE
Q 021975 231 LP----------FA--SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 231 lp----------~~--~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
++ +. -...|+|+....+.--..|.-+-+++.+.+|||.+++=..
T Consensus 257 ~s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 257 MSGEYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp --CHHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred cchhhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 00 00 0357999865322221223233478899999998777544
No 433
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=87.03 E-value=0.21 Score=35.44 Aligned_cols=31 Identities=16% Similarity=0.501 Sum_probs=22.0
Q ss_pred CeeeccCCCccccccCCCCccccccccCceeeCCCCcccc
Q 021975 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYS 98 (304)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 98 (304)
....||.|+..-.... -.+.|.|..|+..+.
T Consensus 35 ~ky~CpfCgk~~vkR~---------a~GIW~C~~Cg~~~A 65 (92)
T 3iz5_m 35 SKYFCEFCGKFAVKRK---------AVGIWGCKDCGKVKA 65 (92)
T ss_dssp SCBCCTTTCSSCBEEE---------ETTEEECSSSCCEEE
T ss_pred ccccCcccCCCeeEec---------CcceEEcCCCCCEEe
Confidence 4578999999643321 127999999998763
No 434
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=87.02 E-value=4.9 Score=34.22 Aligned_cols=77 Identities=16% Similarity=0.225 Sum_probs=52.9
Q ss_pred cCCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC-----C-
Q 021975 165 AQGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDF-SENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-----A- 234 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~-s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~-----~- 234 (304)
..++++|-.|++.|- ....|++.|. +|+.+|. +++.++...+.+...+ .++.++.+|+.+... .
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~ 100 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGF--DIAITGIGDAEGVAPVIAELSGLG----ARVIFLRADLADLSSHQATVDA 100 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCCHHHHHHHHHHHHHTT----CCEEEEECCTTSGGGHHHHHHH
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHHHhcC----CcEEEEEecCCCHHHHHHHHHH
Confidence 356788988877652 4566666676 9999995 7766666666555543 679999999987531 0
Q ss_pred ----CCccceEEecchh
Q 021975 235 ----SGFVDAVHAGAAL 247 (304)
Q Consensus 235 ----~~~fD~V~~~~vl 247 (304)
-+..|+++.+..+
T Consensus 101 ~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 101 VVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHHSCCCEEEEECC-
T ss_pred HHHHcCCCCEEEECCCc
Confidence 1368999987655
No 435
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=87.00 E-value=6 Score=33.34 Aligned_cols=78 Identities=17% Similarity=0.201 Sum_probs=53.9
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC-----C---
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-----A--- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~-----~--- 234 (304)
.++++|-.|++.|- ....|++.|. +|+.++.++..++.+.+.+.... ..++.++.+|+.+..- .
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~ 93 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGA--RLVLSGRDVSELDAARRALGEQF---GTDVHTVAIDLAEPDAPAELARRAA 93 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH---CCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHH
Confidence 46788888876652 4555666676 99999999988777766654421 2578999999987531 0
Q ss_pred --CCccceEEecchhc
Q 021975 235 --SGFVDAVHAGAALH 248 (304)
Q Consensus 235 --~~~fD~V~~~~vl~ 248 (304)
-+..|+++.+..+.
T Consensus 94 ~~~g~id~lv~nAg~~ 109 (266)
T 4egf_A 94 EAFGGLDVLVNNAGIS 109 (266)
T ss_dssp HHHTSCSEEEEECCCC
T ss_pred HHcCCCCEEEECCCcC
Confidence 13689999876543
No 436
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=86.98 E-value=0.37 Score=32.43 Aligned_cols=28 Identities=18% Similarity=0.539 Sum_probs=21.1
Q ss_pred CeeeccCCCccccccCCCCccccccccCceeeCCCCcc
Q 021975 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKT 96 (304)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~ 96 (304)
-.+.|+.||..+..... ...+|+.||+.
T Consensus 27 v~Y~C~~CG~~~e~~~~----------d~irCp~CG~R 54 (70)
T 1twf_L 27 LKYICAECSSKLSLSRT----------DAVRCKDCGHR 54 (70)
T ss_dssp CCEECSSSCCEECCCTT----------STTCCSSSCCC
T ss_pred EEEECCCCCCcceeCCC----------CCccCCCCCce
Confidence 45889999998655321 46799999984
No 437
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=86.85 E-value=9.7 Score=32.09 Aligned_cols=78 Identities=19% Similarity=0.204 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCcc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC---
Q 021975 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 234 (304)
.++++|-.|++.| .+...|++.|. +|++++.++..++...+.++..+ ...++.++.+|+.+.. +.
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~ 106 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGL--KVVGCARTVGNIEELAAECKSAG--YPGTLIPYRCDLSNEEDILSMFSAIR 106 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEECChHHHHHHHHHHHhcC--CCceEEEEEecCCCHHHHHHHHHHHH
Confidence 4678888887654 23445555665 99999999887776666555443 2246788899987642 00
Q ss_pred --CCccceEEecchh
Q 021975 235 --SGFVDAVHAGAAL 247 (304)
Q Consensus 235 --~~~fD~V~~~~vl 247 (304)
-+.+|+|+....+
T Consensus 107 ~~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 107 SQHSGVDICINNAGL 121 (279)
T ss_dssp HHHCCCSEEEECCCC
T ss_pred HhCCCCCEEEECCCC
Confidence 1368999887654
No 438
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=86.83 E-value=1.3 Score=37.53 Aligned_cols=103 Identities=15% Similarity=0.151 Sum_probs=65.6
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC--
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVAL-DFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gi-D~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 234 (304)
.++++|-.|++.|- ....|++.|. +|+.+ +.+....+...+.++..+ .++.++.+|+.+.. +.
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~ 80 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA--NVVLTYNGAAEGAATAVAEIEKLG----RSALAIKADLTNAAEVEAAISAA 80 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECSSCHHHHHHHHHHHTTT----SCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC----CceEEEEcCCCCHHHHHHHHHHH
Confidence 46789988887662 4566666676 88888 667666666666565543 57889999997742 10
Q ss_pred ---CCccceEEecchhc-c---CC--CHH--------------HHHHHHHHhcccCcEEEEEE
Q 021975 235 ---SGFVDAVHAGAALH-C---WP--SPS--------------NAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 235 ---~~~fD~V~~~~vl~-h---~~--d~~--------------~~l~~~~r~LkpgG~lvi~~ 274 (304)
-+..|+++.+.... . +. +++ .+.+.+.+.++++|.++...
T Consensus 81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 81 ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp HHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 13689998866432 1 11 111 23556666777778777654
No 439
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=86.82 E-value=0.81 Score=40.20 Aligned_cols=94 Identities=13% Similarity=0.120 Sum_probs=59.2
Q ss_pred cCCC-eEEEEcC--CccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccC--CC-CCCCCCc
Q 021975 165 AQGG-LLVDVSC--GSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV--CR-LPFASGF 237 (304)
Q Consensus 165 ~~~~-~vLDiGc--G~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~--~~-lp~~~~~ 237 (304)
.++. +||-+|+ |.|.....+++. |. ++++++.+++.++.+++. + ....+-..+. .. .....+.
T Consensus 148 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga--~vi~~~~~~~~~~~~~~l----G----a~~v~~~~~~~~~~~~~~~~~~ 217 (330)
T 1tt7_A 148 SPEKGSVLVTGATGGVGGIAVSMLNKRGY--DVVASTGNREAADYLKQL----G----ASEVISREDVYDGTLKALSKQQ 217 (330)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHHTC--CEEEEESSSSTHHHHHHH----T----CSEEEEHHHHCSSCCCSSCCCC
T ss_pred CCCCceEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHc----C----CcEEEECCCchHHHHHHhhcCC
Confidence 3453 8999997 357777777765 54 899999988777777652 1 1111111111 11 1122346
Q ss_pred cceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 238 VDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 238 fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
+|+|+..- .. ..+.+..+.|++||++++...
T Consensus 218 ~d~vid~~-----g~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 218 WQGAVDPV-----GG--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp EEEEEESC-----CT--HHHHHHHTTEEEEEEEEECCC
T ss_pred ccEEEECC-----cH--HHHHHHHHhhcCCCEEEEEec
Confidence 89887643 23 368889999999999887654
No 440
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=86.64 E-value=5.2 Score=34.95 Aligned_cols=91 Identities=14% Similarity=0.162 Sum_probs=57.7
Q ss_pred CCeEEEEcCCc-c-HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC-CCCCCCccceEEe
Q 021975 167 GGLLVDVSCGS-G-LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPFASGFVDAVHA 243 (304)
Q Consensus 167 ~~~vLDiGcG~-G-~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp~~~~~fD~V~~ 243 (304)
..+|.=||+|. | .+...+.+.|...+|+++|.+++.++.+.+ .+ . +.-...+..+ . -...|+|+.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~----~G----~-~~~~~~~~~~~~---~~~aDvVil 100 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LG----I-IDEGTTSIAKVE---DFSPDFVML 100 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TT----S-CSEEESCTTGGG---GGCCSEEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH----CC----C-cchhcCCHHHHh---hccCCEEEE
Confidence 36899999985 3 456666666654589999999988777664 12 1 1112233332 1 134788887
Q ss_pred cchhccCCCHHHHHHHHHHhcccCcEEEE
Q 021975 244 GAALHCWPSPSNAVAEISRILRSGGVFVG 272 (304)
Q Consensus 244 ~~vl~h~~d~~~~l~~~~r~LkpgG~lvi 272 (304)
.--.. ....+++++...|++|.+++-
T Consensus 101 avp~~---~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 101 SSPVR---TFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp CSCGG---GHHHHHHHHHHHSCTTCEEEE
T ss_pred eCCHH---HHHHHHHHHhhccCCCcEEEE
Confidence 53322 235678889899998876543
No 441
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=86.49 E-value=3.5 Score=35.15 Aligned_cols=76 Identities=14% Similarity=0.136 Sum_probs=53.6
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCC---------
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--------- 233 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~--------- 233 (304)
.++++|-.|++.|- ....|++.|. +|+.+|.++...+...+.+...+ .++.++.+|+.+...
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~ 105 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGA--HVILHGVKPGSTAAVQQRIIASG----GTAQELAGDLSEAGAGTDLIERAE 105 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSTTTTHHHHHHHHHTT----CCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC----CeEEEEEecCCCHHHHHHHHHHHH
Confidence 46788888876652 4555666676 99999998877777666665544 678999999977430
Q ss_pred CCCccceEEecchh
Q 021975 234 ASGFVDAVHAGAAL 247 (304)
Q Consensus 234 ~~~~fD~V~~~~vl 247 (304)
..+.+|+++.+..+
T Consensus 106 ~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 106 AIAPVDILVINASA 119 (275)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCCCEEEECCCC
Confidence 01468999987654
No 442
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=86.41 E-value=1.8 Score=36.43 Aligned_cols=76 Identities=18% Similarity=0.256 Sum_probs=48.7
Q ss_pred CCCeEEEEcCCcc---HHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC--
Q 021975 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDF-SENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~-s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 234 (304)
++++||=.|++.| .+...|++.|. +|++++. ++...+...+.++..+ .++.++.+|+.+.. +.
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~l~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 93 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGA--SVVVNYGSSSKAAEEVVAELKKLG----AQGVAIQADISKPSEVVALFDKA 93 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT----CCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCchHHHHHHHHHHHhcC----CcEEEEEecCCCHHHHHHHHHHH
Confidence 3567887776543 23444555565 9999998 7766665555554433 57889999987642 10
Q ss_pred ---CCccceEEecchh
Q 021975 235 ---SGFVDAVHAGAAL 247 (304)
Q Consensus 235 ---~~~fD~V~~~~vl 247 (304)
-+.+|+|+.....
T Consensus 94 ~~~~~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 94 VSHFGGLDFVMSNSGM 109 (274)
T ss_dssp HHHHSCEEEEECCCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 0268999876554
No 443
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=86.23 E-value=17 Score=32.05 Aligned_cols=120 Identities=13% Similarity=0.186 Sum_probs=76.7
Q ss_pred HHHHHhhccc-CCCeEEEEcCCccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCc------------------
Q 021975 156 KMAQEYFKSA-QGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNT------------------ 215 (304)
Q Consensus 156 ~~l~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~------------------ 215 (304)
+.+.+++... +...|+-+|||.=.....+...+ +...++=+|. |+.++.=++.+...+.
T Consensus 79 ~~v~~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~ 157 (334)
T 3iei_A 79 QLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDG 157 (334)
T ss_dssp HHHHHHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCT
T ss_pred HHHHHHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhccccccccccccc
Confidence 3445555543 45789999999988777776642 3568888886 5555544444442100
Q ss_pred --cCCCCeEEEEccCCCCC----------CCCCccceEEecchhccCCCH--HHHHHHHHHhcccCcEEEEEEeCC
Q 021975 216 --ILTSNLALVRADVCRLP----------FASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 216 --~~~~~i~~~~~d~~~lp----------~~~~~fD~V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
....+..++.+|+.+.. +....--++++-.++.+++.. ..+|+.+.... |+|.+++.++..
T Consensus 158 ~~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~ 232 (334)
T 3iei_A 158 HILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVN 232 (334)
T ss_dssp TEEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECC
T ss_pred ccCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccC
Confidence 01467899999997631 333344577778888888633 46777777766 566666667664
No 444
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=86.07 E-value=0.22 Score=35.95 Aligned_cols=31 Identities=23% Similarity=0.699 Sum_probs=22.1
Q ss_pred CeeeccCCCccccccCCCCccccccccCceeeCCCCcccc
Q 021975 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYS 98 (304)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 98 (304)
....||.|+..-.... -.+.|.|..|+..+.
T Consensus 35 aky~CpfCgk~~vKR~---------a~GIW~C~kCg~~~A 65 (103)
T 4a17_Y 35 AKYGCPFCGKVAVKRA---------AVGIWKCKPCKKIIA 65 (103)
T ss_dssp SCEECTTTCCEEEEEE---------ETTEEEETTTTEEEE
T ss_pred cCCCCCCCCCceeeec---------CcceEEcCCCCCEEe
Confidence 4588999998643221 127999999998763
No 445
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=85.90 E-value=0.52 Score=42.49 Aligned_cols=102 Identities=17% Similarity=0.221 Sum_probs=54.1
Q ss_pred cCCCeEEEEcCCc-cHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEE
Q 021975 165 AQGGLLVDVSCGS-GLFSRKFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 242 (304)
Q Consensus 165 ~~~~~vLDiGcG~-G~~~~~l~~-~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~ 242 (304)
.++.+|+=+|+|. |......+. .|. +|+++|.++..++.+.+.+ + ..+.....+..++.-.-..+|+|+
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~Ga--~V~~~d~~~~~~~~~~~~~---g----~~~~~~~~~~~~l~~~~~~~DvVi 234 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMGA--QVTILDVNHKRLQYLDDVF---G----GRVITLTATEANIKKSVQHADLLI 234 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHT---T----TSEEEEECCHHHHHHHHHHCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHhc---C----ceEEEecCCHHHHHHHHhCCCEEE
Confidence 3568999999963 443333333 354 9999999998777665432 1 122221111111100012578887
Q ss_pred ecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 243 AGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 243 ~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
..-.......+..+.++..+.+|+||+++....
T Consensus 235 ~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~ 267 (369)
T 2eez_A 235 GAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAV 267 (369)
T ss_dssp ECCC-------CCSCHHHHTTSCTTCEEEECC-
T ss_pred ECCCCCccccchhHHHHHHHhhcCCCEEEEEec
Confidence 754332111111135677888999998876543
No 446
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=85.75 E-value=3.1 Score=35.32 Aligned_cols=104 Identities=20% Similarity=0.237 Sum_probs=66.6
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEe-CCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC--
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALD-FSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD-~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 234 (304)
.++++|=.|++.|- ....|++.|. +|+.++ .+....+...+.++..+ .++.++.+|+.+.. +.
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~--~Vv~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~ 99 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGF--TVVINYAGKAAAAEEVAGKIEAAG----GKALTAQADVSDPAAVRRLFATA 99 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTC--EEEEEESSCSHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC----CeEEEEEcCCCCHHHHHHHHHHH
Confidence 36788988887662 4566677776 888774 45555565555555543 67889999997742 10
Q ss_pred ---CCccceEEecchhccCC-----CHH--------------HHHHHHHHhcccCcEEEEEEe
Q 021975 235 ---SGFVDAVHAGAALHCWP-----SPS--------------NAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 235 ---~~~fD~V~~~~vl~h~~-----d~~--------------~~l~~~~r~LkpgG~lvi~~~ 275 (304)
-+..|+++.+..+.... +.+ .+++.+.+.++.+|.++...-
T Consensus 100 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 162 (267)
T 3u5t_A 100 EEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST 162 (267)
T ss_dssp HHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 13689999876543321 111 245677778888888877653
No 447
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=85.75 E-value=0.24 Score=35.05 Aligned_cols=31 Identities=23% Similarity=0.655 Sum_probs=21.9
Q ss_pred CeeeccCCCccccccCCCCccccccccCceeeCCCCcccc
Q 021975 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYS 98 (304)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 98 (304)
....||.|+..-.... -.+.|.|..|+..+.
T Consensus 35 ~ky~CpfCgk~~vkR~---------a~GIW~C~~C~~~~A 65 (92)
T 3izc_m 35 ARYDCSFCGKKTVKRG---------AAGIWTCSCCKKTVA 65 (92)
T ss_dssp SCCCCSSSCSSCCEEE---------ETTEEECTTTCCEEE
T ss_pred cCCcCCCCCCceeeec---------ccceEEcCCCCCEEe
Confidence 4588999998642211 127899999998763
No 448
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=85.73 E-value=3.8 Score=35.65 Aligned_cols=97 Identities=18% Similarity=0.106 Sum_probs=59.2
Q ss_pred HhhcccCCCeEEEEc-CC-ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC-CCCCCC
Q 021975 160 EYFKSAQGGLLVDVS-CG-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPFASG 236 (304)
Q Consensus 160 ~~l~~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~-lp~~~~ 236 (304)
......++.+||-+| +| .|.....+++.. +.++++++ ++...+.+++ .+ .. .++...-.+ +.-.-.
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~-~~~~~~~~~~----lG----a~-~~i~~~~~~~~~~~~~ 214 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTA-SKRNHAFLKA----LG----AE-QCINYHEEDFLLAIST 214 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEE-CHHHHHHHHH----HT----CS-EEEETTTSCHHHHCCS
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEe-ccchHHHHHH----cC----CC-EEEeCCCcchhhhhcc
Confidence 344556788999997 55 488888888764 34999998 5554666655 22 11 122221111 111114
Q ss_pred ccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEE
Q 021975 237 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
.+|+|+-.-. . ..+.+..+.|+++|+++...
T Consensus 215 g~D~v~d~~g-----~--~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 215 PVDAVIDLVG-----G--DVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp CEEEEEESSC-----H--HHHHHHGGGEEEEEEEEECC
T ss_pred CCCEEEECCC-----c--HHHHHHHHhccCCCEEEEeC
Confidence 6898886432 1 23488899999999998753
No 449
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=85.61 E-value=4.3 Score=34.95 Aligned_cols=79 Identities=22% Similarity=0.232 Sum_probs=51.0
Q ss_pred CCCeEEEEcCCcc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC---
Q 021975 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 234 (304)
.++++|-.|++.| .....|++.|. +|+.++.++..++...+.+...+. ...++.++.+|+.+.. +.
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGA--QVTITGRNEDRLEETKQQILKAGV-PAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTC-CGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC-CCceEEEEecCCCCHHHHHHHHHHHH
Confidence 4567888777655 23455556666 999999998877666655544320 0116889999997642 10
Q ss_pred --CCccceEEecchh
Q 021975 235 --SGFVDAVHAGAAL 247 (304)
Q Consensus 235 --~~~fD~V~~~~vl 247 (304)
-+.+|+++.+..+
T Consensus 102 ~~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 102 AKFGKIDILVNNAGA 116 (297)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 1368999987654
No 450
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=85.33 E-value=0.47 Score=42.63 Aligned_cols=102 Identities=19% Similarity=0.214 Sum_probs=57.9
Q ss_pred CCCeEEEEcCCc-cHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEe
Q 021975 166 QGGLLVDVSCGS-GLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (304)
Q Consensus 166 ~~~~vLDiGcG~-G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 243 (304)
++.+||=+|+|. |.....++.. |. +|+++|.+++.++.+++.... .+..+..+..++.-.-..+|+|+.
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga--~V~v~dr~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~DvVI~ 236 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA--QVQIFDINVERLSYLETLFGS-------RVELLYSNSAEIETAVAEADLLIG 236 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGG-------GSEEEECCHHHHHHHHHTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHhhCc-------eeEeeeCCHHHHHHHHcCCCEEEE
Confidence 457999999964 4444444443 54 999999999888877764421 122221111111000125899987
Q ss_pred cchhccCCCHHHHHHHHHHhcccCcEEEEEEeC
Q 021975 244 GAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 244 ~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~~ 276 (304)
.-.......|.-+.++..+.|++||+++-..+.
T Consensus 237 ~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 237 AVLVPGRRAPILVPASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp CCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred CCCcCCCCCCeecCHHHHhhCCCCCEEEEEecC
Confidence 543332212221245567889999988766543
No 451
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=85.33 E-value=5.9 Score=33.38 Aligned_cols=79 Identities=15% Similarity=0.153 Sum_probs=53.4
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----C-CCC
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F-ASG 236 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~-~~~ 236 (304)
.++++|-.|++.|- ....|++.|. +|+.+|.++..++...+.+.... ....+.++.+|+.+.. + .-+
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~g 84 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGA--NVLINGRREENVNETIKEIRAQY--PDAILQPVVADLGTEQGCQDVIEKYP 84 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHC--TTCEEEEEECCTTSHHHHHHHHHHCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhC--CCceEEEEecCCCCHHHHHHHHHhcC
Confidence 46788888876552 4555666676 99999999988777766665543 2356788889987632 0 124
Q ss_pred ccceEEecchhc
Q 021975 237 FVDAVHAGAALH 248 (304)
Q Consensus 237 ~fD~V~~~~vl~ 248 (304)
..|+++.+..+.
T Consensus 85 ~id~lv~nAg~~ 96 (267)
T 3t4x_A 85 KVDILINNLGIF 96 (267)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999876543
No 452
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=85.28 E-value=2.5 Score=36.46 Aligned_cols=103 Identities=17% Similarity=0.193 Sum_probs=65.7
Q ss_pred CCCeEEEEcCCc----cH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC-
Q 021975 166 QGGLLVDVSCGS----GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~----G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~- 234 (304)
.++++|-.|++. |. ....|++.|. +|+.+|.++...+...+..+..+ .+.++.+|+.+.. +.
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~ 101 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA--EVALTYLSETFKKRVDPLAESLG-----VKLTVPCDVSDAESVDNMFKV 101 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHHT-----CCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhcC-----CeEEEEcCCCCHHHHHHHHHH
Confidence 467899999753 43 4666677776 99999998765555555444332 4678899997742 10
Q ss_pred ----CCccceEEecchhccC---------CCHH--------------HHHHHHHHhcccCcEEEEEEe
Q 021975 235 ----SGFVDAVHAGAALHCW---------PSPS--------------NAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 235 ----~~~fD~V~~~~vl~h~---------~d~~--------------~~l~~~~r~LkpgG~lvi~~~ 275 (304)
-+.+|+++.+..+... .+.+ .+++.+.+.++.+|.++....
T Consensus 102 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 102 LAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 1468999987654321 1111 235566667778888887654
No 453
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=85.21 E-value=3.6 Score=34.69 Aligned_cols=106 Identities=21% Similarity=0.257 Sum_probs=70.2
Q ss_pred CCCeEEEEcCC----ccH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----C--
Q 021975 166 QGGLLVDVSCG----SGL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F-- 233 (304)
Q Consensus 166 ~~~~vLDiGcG----~G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~-- 233 (304)
+++++|--|++ .|. ....|++.|. +|+.+|.++...+.+.+.++..+ ..++.++.+|+.+.. +
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga--~Vvi~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA--KLVFTYRKERSRKELEKLLEQLN---QPEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHGGGT---CSSCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC---CCcEEEEEccCCCHHHHHHHHHH
Confidence 57889999853 444 4667777777 99999999888888877776654 357889999987632 0
Q ss_pred ---CCCccceEEecchhccC---------CCHHH--------------HHHHHHHhcccCcEEEEEEeC
Q 021975 234 ---ASGFVDAVHAGAALHCW---------PSPSN--------------AVAEISRILRSGGVFVGTTFL 276 (304)
Q Consensus 234 ---~~~~fD~V~~~~vl~h~---------~d~~~--------------~l~~~~r~LkpgG~lvi~~~~ 276 (304)
.-+..|+++.+..+.+. .+.+. ........++.+|.++.....
T Consensus 80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~ 148 (256)
T 4fs3_A 80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYL 148 (256)
T ss_dssp HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECG
T ss_pred HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecc
Confidence 12478988876543211 01111 224455677889988876643
No 454
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=85.18 E-value=3.3 Score=38.01 Aligned_cols=98 Identities=20% Similarity=0.166 Sum_probs=62.4
Q ss_pred hcccCCCeEEEEcC-C-ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEc--cCCCC------
Q 021975 162 FKSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA--DVCRL------ 231 (304)
Q Consensus 162 l~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~--d~~~l------ 231 (304)
....++.+||-+|+ | .|.....+++.. +.++++++.+++.++.+++. + ....+-.. +....
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~~l----G----a~~~i~~~~~~~~~~~~~~~~ 286 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRAL----G----CDLVINRAELGITDDIADDPR 286 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----T----CCCEEEHHHHTCCTTGGGCHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----C----CCEEEeccccccccccccccc
Confidence 34557889999997 3 477777777763 34999999999888887651 2 11111111 11000
Q ss_pred --------------CCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEEe
Q 021975 232 --------------PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 232 --------------p~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~~ 275 (304)
......+|+|+....- ..+....+.|++||+++....
T Consensus 287 ~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~-------~~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 287 RVVETGRKLAKLVVEKAGREPDIVFEHTGR-------VTFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCSEEEECSCH-------HHHHHHHHHSCTTCEEEESCC
T ss_pred ccchhhhHHHHHHHHHhCCCceEEEECCCc-------hHHHHHHHHHhcCCEEEEEec
Confidence 0002468998875431 357888899999999988653
No 455
>3po3_S Transcription elongation factor S-II; RNA polymerase II, mRNA, transcription, arrest, BACKTRACKING cleavage, transferase-DNA-RNA complex; HET: DNA BRU EPE PGE; 3.30A {Saccharomyces cerevisiae} PDB: 1y1v_S 1y1y_S 3gtm_S* 1enw_A
Probab=84.94 E-value=0.64 Score=37.42 Aligned_cols=40 Identities=20% Similarity=0.384 Sum_probs=25.4
Q ss_pred CCeeeccCCCccccc-cCCCCccccccccCceeeCCCCccc
Q 021975 58 GDLFSCPICYEPLIR-KGPTGLTLGAIYRSGFKCRKCDKTY 97 (304)
Q Consensus 58 ~~~l~CP~C~~~l~~-~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (304)
...+.||.|+..-.. ...+.-..++-+...+.|..||+.+
T Consensus 135 t~~~~Cp~C~~~~a~~~q~Q~rsaDE~mt~f~~C~~C~~~w 175 (178)
T 3po3_S 135 TDRFTCGKCKEKKVSYYQLQTRSAAAPLTTFCTCEACGNRW 175 (178)
T ss_dssp BSSSCCSSSCCSCEECCCCCCSCTTSCCCCCEEETTTCCEE
T ss_pred cCCcCCCCCCCCceEEEEeecccCCCCCcEEEEcCCCCCee
Confidence 457899999985321 1111122334455789999999976
No 456
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=84.90 E-value=0.35 Score=43.85 Aligned_cols=97 Identities=20% Similarity=0.190 Sum_probs=57.1
Q ss_pred CCCeEEEEcCCc-cHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccC--C------------
Q 021975 166 QGGLLVDVSCGS-GLFSRKFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV--C------------ 229 (304)
Q Consensus 166 ~~~~vLDiGcG~-G~~~~~l~~-~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~--~------------ 229 (304)
++.+|+=+|+|. |.....++. .|. +|+++|.++..++.+.+. +..++..+. .
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa--~V~v~D~~~~~l~~~~~l----------Ga~~~~l~~~~~~~~gya~~~~~~ 250 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA--KTTGYDVRPEVAEQVRSV----------GAQWLDLGIDAAGEGGYARELSEA 250 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC--EEEEECSSGGGHHHHHHT----------TCEECCCC-------------CHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHc----------CCeEEeccccccccccchhhhhHH
Confidence 578999999985 555444444 354 999999999887777651 223322110 0
Q ss_pred -------CCCCCCCccceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEE
Q 021975 230 -------RLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 230 -------~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
.+.-.-...|+|+....+..-..|.-+-+++.+.+|||++++=..
T Consensus 251 ~~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 251 ERAQQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHhhhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe
Confidence 000001468999875322211122223478899999988766543
No 457
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=84.60 E-value=2.6 Score=33.03 Aligned_cols=32 Identities=9% Similarity=0.166 Sum_probs=29.9
Q ss_pred CCeEEEEcCCccHHHHHHHHhCCCCeEEEEeC
Q 021975 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDF 198 (304)
Q Consensus 167 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~ 198 (304)
.+-|||+|-|+|..-.+|.+..|+..++++|-
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred CCceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 56899999999999999999999999999996
No 458
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=84.52 E-value=1.1 Score=33.19 Aligned_cols=43 Identities=14% Similarity=0.243 Sum_probs=25.9
Q ss_pred CcCCeeeccCCCccccc-cCCCCccccccccCceeeCCCCcccc
Q 021975 56 LEGDLFSCPICYEPLIR-KGPTGLTLGAIYRSGFKCRKCDKTYS 98 (304)
Q Consensus 56 ~~~~~l~CP~C~~~l~~-~~~~~~~~~~i~~~~l~C~~C~~~~~ 98 (304)
+......||.|+..-.. ...+.-..++.+...++|.+|++.+.
T Consensus 68 lp~~~~~Cp~C~~~~a~~~q~q~rsade~mt~fy~C~~C~~~w~ 111 (113)
T 3h0g_I 68 LPRSDKECPRCHQHEAVFYQTHSRRGDTMMTLIYVCVHCGFAFE 111 (113)
T ss_dssp SCBCCSCCSSSCCSCEEEECCCCSSCCCCCCCEEEESSSCCCCC
T ss_pred CCCcccCCCCCCCceEEEEEEecccCCCCCeeEEEcCCCCCEEe
Confidence 33344889999995211 11111223444556899999999863
No 459
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=84.14 E-value=0.31 Score=33.08 Aligned_cols=31 Identities=29% Similarity=0.678 Sum_probs=22.2
Q ss_pred CCeeeccCCCcc-ccccCCCCccccccccCceeeCCCCcccc
Q 021975 58 GDLFSCPICYEP-LIRKGPTGLTLGAIYRSGFKCRKCDKTYS 98 (304)
Q Consensus 58 ~~~l~CP~C~~~-l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 98 (304)
-....||.|+.. +.+.. .+.+.|..|+..+.
T Consensus 25 ~~ky~C~fCgk~~vkR~a----------~GIW~C~~C~~~~A 56 (73)
T 1ffk_W 25 KKKYKCPVCGFPKLKRAS----------TSIWVCGHCGYKIA 56 (73)
T ss_pred ccCccCCCCCCceeEEEE----------eEEEECCCCCcEEE
Confidence 345889999984 33322 27899999998763
No 460
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=84.09 E-value=1.2 Score=31.03 Aligned_cols=35 Identities=20% Similarity=0.494 Sum_probs=22.9
Q ss_pred cCCeee-ccCCCccccccCCCCccccccccCceeeCCCCccccCC
Q 021975 57 EGDLFS-CPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSK 100 (304)
Q Consensus 57 ~~~~l~-CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~ 100 (304)
....+. ||.|+..+..... ...+.|+.|++.|=..
T Consensus 21 ~~~~~~wCP~C~~~~~~~~~---------~~~v~C~~C~~~FC~~ 56 (86)
T 2ct7_A 21 RDPKFLWCAQCSFGFIYERE---------QLEATCPQCHQTFCVR 56 (86)
T ss_dssp SCCCEECCSSSCCCEECCCS---------CSCEECTTTCCEECSS
T ss_pred cCCCEeECcCCCchheecCC---------CCceEeCCCCCccccc
Confidence 344455 9999987754321 1457899999887443
No 461
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=84.05 E-value=4.7 Score=34.14 Aligned_cols=78 Identities=21% Similarity=0.291 Sum_probs=54.0
Q ss_pred CCCeEEEEcCCcc---HHHHHHHHhCCCCeEEEEeCC------------HHHHHHHHHHHHhcCccCCCCeEEEEccCCC
Q 021975 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFS------------ENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (304)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~s------------~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~ 230 (304)
.++++|-.|++.| .....|++.|. +|+.+|.+ .+.++...+.++..+ .++.++.+|+.+
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~ 85 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGA--DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG----SRIVARQADVRD 85 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT----CCEEEEECCTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecccccccccccccchHHHHHHHHHHHhcC----CeEEEEeCCCCC
Confidence 4678998887765 34566666776 99999987 666666655555543 679999999977
Q ss_pred CC-----CC-----CCccceEEecchhcc
Q 021975 231 LP-----FA-----SGFVDAVHAGAALHC 249 (304)
Q Consensus 231 lp-----~~-----~~~fD~V~~~~vl~h 249 (304)
.. +. -+..|+++.+..+..
T Consensus 86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 114 (278)
T 3sx2_A 86 RESLSAALQAGLDELGRLDIVVANAGIAP 114 (278)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 42 11 136899998766543
No 462
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=84.00 E-value=7 Score=35.65 Aligned_cols=94 Identities=14% Similarity=0.167 Sum_probs=62.8
Q ss_pred CCeEEEEcCCc-cHH-HHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC----CCCCccce
Q 021975 167 GGLLVDVSCGS-GLF-SRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----FASGFVDA 240 (304)
Q Consensus 167 ~~~vLDiGcG~-G~~-~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----~~~~~fD~ 240 (304)
...|+=+|+|. |.. ...|.+.+. .|+++|.+++.++.+++ .++.++.+|..+.. ..-...|+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~--~vvvId~d~~~v~~~~~----------~g~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV--KMVVLDHDPDHIETLRK----------FGMKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC--CEEEEECCHHHHHHHHH----------TTCCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHh----------CCCeEEEcCCCCHHHHHhcCCCccCE
Confidence 35688888864 433 333444455 99999999999988876 45678899987742 22346787
Q ss_pred EEecchhccCCCHH--HHHHHHHHhcccCcEEEEEEeCC
Q 021975 241 VHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLR 277 (304)
Q Consensus 241 V~~~~vl~h~~d~~--~~l~~~~r~LkpgG~lvi~~~~~ 277 (304)
|++.. ++.. ..+....+.+.|+..++......
T Consensus 72 viv~~-----~~~~~n~~i~~~ar~~~p~~~Iiara~~~ 105 (413)
T 3l9w_A 72 LINAI-----DDPQTNLQLTEMVKEHFPHLQIIARARDV 105 (413)
T ss_dssp EEECC-----SSHHHHHHHHHHHHHHCTTCEEEEEESSH
T ss_pred EEECC-----CChHHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 77643 3443 34566777888888777766543
No 463
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=83.98 E-value=6 Score=32.38 Aligned_cols=76 Identities=20% Similarity=0.149 Sum_probs=48.1
Q ss_pred CCCeEEEEcCCccHH----HHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCe-EEEEccCC-CCCCCCCccc
Q 021975 166 QGGLLVDVSCGSGLF----SRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNL-ALVRADVC-RLPFASGFVD 239 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~----~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i-~~~~~d~~-~lp~~~~~fD 239 (304)
.+.+||=.|+. |.. ...|.+.+. +|++++-++...+.... .++ .++.+|+. .+.-.-+.+|
T Consensus 20 ~~~~ilVtGat-G~iG~~l~~~L~~~G~--~V~~~~R~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~D 86 (236)
T 3e8x_A 20 QGMRVLVVGAN-GKVARYLLSELKNKGH--EPVAMVRNEEQGPELRE----------RGASDIVVANLEEDFSHAFASID 86 (236)
T ss_dssp -CCEEEEETTT-SHHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHH----------TTCSEEEECCTTSCCGGGGTTCS
T ss_pred CCCeEEEECCC-ChHHHHHHHHHHhCCC--eEEEEECChHHHHHHHh----------CCCceEEEcccHHHHHHHHcCCC
Confidence 46789988864 433 444555565 99999998876554433 367 88999986 2211123689
Q ss_pred eEEecchhccCCCHH
Q 021975 240 AVHAGAALHCWPSPS 254 (304)
Q Consensus 240 ~V~~~~vl~h~~d~~ 254 (304)
+|+.........++.
T Consensus 87 ~vi~~ag~~~~~~~~ 101 (236)
T 3e8x_A 87 AVVFAAGSGPHTGAD 101 (236)
T ss_dssp EEEECCCCCTTSCHH
T ss_pred EEEECCCCCCCCCcc
Confidence 999876654434443
No 464
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=83.91 E-value=0.87 Score=33.72 Aligned_cols=39 Identities=18% Similarity=0.303 Sum_probs=27.4
Q ss_pred CeeeccCCCccccccCCCCccccccccCceeeCCCCccccCCCC
Q 021975 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDN 102 (304)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g 102 (304)
.+.-||.|++-|......+. -...+.|++|+..+.+.+.
T Consensus 3 ~m~FCp~Cgn~L~~~~~~~~-----~~~~~~C~~C~y~~~~~~~ 41 (113)
T 3h0g_I 3 NFQYCIECNNMLYPREDKVD-----RVLRLACRNCDYSEIAATS 41 (113)
T ss_dssp CCCCCSSSCCCCEECCCTTT-----CCCCEECSSSCCEECCSCS
T ss_pred cceeCcCCCCEeeEcccCCC-----CeeEEECCCCCCeEEcCCC
Confidence 35679999999877553210 1147999999998877654
No 465
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=83.84 E-value=4.9 Score=33.65 Aligned_cols=104 Identities=9% Similarity=0.098 Sum_probs=64.5
Q ss_pred cCCCeEEEEcCC--cc--H-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC
Q 021975 165 AQGGLLVDVSCG--SG--L-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA 234 (304)
Q Consensus 165 ~~~~~vLDiGcG--~G--~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~ 234 (304)
.++++||-.|++ .| . ....|++.|. +|+.++.+....+.+++..+.. .++.++.+|+.+.. +.
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~ 84 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGA--ELAFTYVGDRFKDRITEFAAEF-----GSELVFPCDVADDAQIDALFA 84 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHT-----TCCCEEECCTTCHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCC--CEEEEecchhhHHHHHHHHHHc-----CCcEEEECCCCCHHHHHHHHH
Confidence 457899999975 33 2 3455666666 9999998865555554443333 34788999997742 00
Q ss_pred -----CCccceEEecchhccC----------CCHH--------------HHHHHHHHhcccCcEEEEEEe
Q 021975 235 -----SGFVDAVHAGAALHCW----------PSPS--------------NAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 235 -----~~~fD~V~~~~vl~h~----------~d~~--------------~~l~~~~r~LkpgG~lvi~~~ 275 (304)
-+..|+++.+..+.+. .+.. .+++.+.+.++++|.++....
T Consensus 85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 154 (271)
T 3ek2_A 85 SLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY 154 (271)
T ss_dssp HHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence 1468999987654321 1121 235566667777888776653
No 466
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=83.47 E-value=5.9 Score=33.55 Aligned_cols=76 Identities=24% Similarity=0.363 Sum_probs=57.7
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----C----
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F---- 233 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~---- 233 (304)
+++++|--|.+.|- ....|++.|. +|+.+|.+++.++...+.++..+ .++.++.+|+.+.. +
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga--~Vv~~~~~~~~~~~~~~~i~~~g----~~~~~~~~Dvt~~~~v~~~~~~~~ 79 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDS--IVVAVELLEDRLNQIVQELRGMG----KEVLGVKADVSKKKDVEEFVRRTF 79 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC----CcEEEEEccCCCHHHHHHHHHHHH
Confidence 57788888987773 4556666776 99999999999988888887765 68899999997742 0
Q ss_pred -CCCccceEEecchh
Q 021975 234 -ASGFVDAVHAGAAL 247 (304)
Q Consensus 234 -~~~~fD~V~~~~vl 247 (304)
.-+..|+++.+..+
T Consensus 80 ~~~G~iDiLVNNAGi 94 (254)
T 4fn4_A 80 ETYSRIDVLCNNAGI 94 (254)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCcc
Confidence 01578999987653
No 467
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=83.20 E-value=5.8 Score=33.01 Aligned_cols=76 Identities=22% Similarity=0.247 Sum_probs=48.6
Q ss_pred CCCeEEEEcCCcc---HHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC--
Q 021975 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDF-SENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~-s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 234 (304)
.+++||=.|++.| .....|++.+. +|+.++. ++...+...+.++..+ .++.++.+|+.+.. +.
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 79 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKA--KVVVNYRSKEDEANSVLEEIKKVG----GEAIAVKGDVTVESDVINLVQSA 79 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT----CEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEcCCChHHHHHHHHHHHhcC----CceEEEECCCCCHHHHHHHHHHH
Confidence 3567887776544 23445555665 9999998 7766665555554433 56888999987632 10
Q ss_pred ---CCccceEEecchh
Q 021975 235 ---SGFVDAVHAGAAL 247 (304)
Q Consensus 235 ---~~~fD~V~~~~vl 247 (304)
-+.+|+|+....+
T Consensus 80 ~~~~g~id~li~~Ag~ 95 (261)
T 1gee_A 80 IKEFGKLDVMINNAGL 95 (261)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1268999887554
No 468
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=83.14 E-value=19 Score=30.59 Aligned_cols=61 Identities=11% Similarity=0.071 Sum_probs=42.1
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEe-CCHHHHHHHHHHHH-hcCccCCCCeEEEEccCCCCC
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALD-FSENMLRQCYDFIK-QDNTILTSNLALVRADVCRLP 232 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD-~s~~~~~~a~~~~~-~~~~~~~~~i~~~~~d~~~lp 232 (304)
.++++|-.|++.|- ....|++.|. +|+.++ .++..++.+.+.+. ..+ .++.++.+|+.+..
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGY--AVCLHYHRSAAEANALSATLNARRP----NSAITVQADLSNVA 73 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHHST----TCEEEEECCCSSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--eEEEEcCCCHHHHHHHHHHHhhhcC----CeeEEEEeecCCcc
Confidence 35678877776552 3455556666 999999 99877776666554 222 57889999997643
No 469
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=83.13 E-value=7.4 Score=33.02 Aligned_cols=104 Identities=20% Similarity=0.309 Sum_probs=62.6
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC--
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSEN-MLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~-~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~-- 234 (304)
.++++|-.|++.|- ....|++.|. +|+.++.+.. ..+...+.+...+ .++.++.+|+.+.. +.
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 101 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGC--KVIVNYANSTESAEEVVAAIKKNG----SDAACVKANVGVVEDIVRMFEEA 101 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHHhC----CCeEEEEcCCCCHHHHHHHHHHH
Confidence 35678888776552 3455555665 9999988754 3344334344333 57888999987632 10
Q ss_pred ---CCccceEEecchhccCC-----CHH--------------HHHHHHHHhcccCcEEEEEEe
Q 021975 235 ---SGFVDAVHAGAALHCWP-----SPS--------------NAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 235 ---~~~fD~V~~~~vl~h~~-----d~~--------------~~l~~~~r~LkpgG~lvi~~~ 275 (304)
-+.+|+++.+..+.+.. +++ .+++.+.+.|+.+|.++...-
T Consensus 102 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 164 (283)
T 1g0o_A 102 VKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS 164 (283)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 13689999876543321 111 234666777777788776653
No 470
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=83.02 E-value=9.8 Score=31.38 Aligned_cols=75 Identities=16% Similarity=0.236 Sum_probs=50.6
Q ss_pred cCCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----C-CC
Q 021975 165 AQGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F-AS 235 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~-~~ 235 (304)
.++++||=.|++.|- ....|++.|. +|+.++.++..++...+.+ ..++.++.+|+.+.. + ..
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 82 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGS--KVIISGSNEEKLKSLGNAL-------KDNYTIEVCNLANKEECSNLISKT 82 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------CSSEEEEECCTTSHHHHHHHHHTC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHh-------ccCccEEEcCCCCHHHHHHHHHhc
Confidence 357789988876652 4455666666 9999999988777665543 246888899987632 1 12
Q ss_pred CccceEEecchhc
Q 021975 236 GFVDAVHAGAALH 248 (304)
Q Consensus 236 ~~fD~V~~~~vl~ 248 (304)
+..|+++.+..+.
T Consensus 83 ~~id~li~~Ag~~ 95 (249)
T 3f9i_A 83 SNLDILVCNAGIT 95 (249)
T ss_dssp SCCSEEEECCC--
T ss_pred CCCCEEEECCCCC
Confidence 4689999876543
No 471
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=82.96 E-value=0.84 Score=29.95 Aligned_cols=31 Identities=16% Similarity=0.449 Sum_probs=23.3
Q ss_pred CeeeccCCCccccccCCCCccccccccCceeeCCCCccccC
Q 021975 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSS 99 (304)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~ 99 (304)
..+.|..|+....... ...++|+.||+....
T Consensus 20 v~Y~C~~Cg~~~~l~~----------~~~iRC~~CG~RILy 50 (63)
T 3h0g_L 20 MIYLCADCGARNTIQA----------KEVIRCRECGHRVMY 50 (63)
T ss_dssp CCCBCSSSCCBCCCCS----------SSCCCCSSSCCCCCB
T ss_pred eEEECCCCCCeeecCC----------CCceECCCCCcEEEE
Confidence 4589999999875532 157999999987533
No 472
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=82.90 E-value=0.68 Score=41.96 Aligned_cols=43 Identities=21% Similarity=0.087 Sum_probs=30.7
Q ss_pred cCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH
Q 021975 165 AQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYD 208 (304)
Q Consensus 165 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~ 208 (304)
.++.+|+=+|+|. |.....+++.. +.+|+++|.++...+.+++
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 170 VPPARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRAATKEQVES 213 (384)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence 3688999999985 55555555543 2489999999876666654
No 473
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=82.74 E-value=3 Score=35.30 Aligned_cols=78 Identities=19% Similarity=0.169 Sum_probs=48.8
Q ss_pred CCeEEEEcCCcc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC----
Q 021975 167 GGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA---- 234 (304)
Q Consensus 167 ~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~---- 234 (304)
++++|-.|++.| .....|++.|. +|+.++.++..++...+.+..... ...++.++.+|+.+.. +.
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFAREGA--KVTITGRHAERLEETRQQILAAGV-SEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTC-CGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhccc-CCCceeEEecccCCHHHHHHHHHHHHH
Confidence 567887777654 23455556666 999999998877666554421110 1246888999987632 10
Q ss_pred -CCccceEEecchh
Q 021975 235 -SGFVDAVHAGAAL 247 (304)
Q Consensus 235 -~~~fD~V~~~~vl 247 (304)
-+.+|+++.+..+
T Consensus 83 ~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 83 KFGKLDILVNNAGA 96 (278)
T ss_dssp HHSCCCEEEECCC-
T ss_pred HcCCCCEEEECCCC
Confidence 1268999887654
No 474
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=82.49 E-value=3 Score=37.25 Aligned_cols=95 Identities=14% Similarity=0.087 Sum_probs=57.7
Q ss_pred ccCCCeEEEEc-CC-ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC---CCCCcc
Q 021975 164 SAQGGLLVDVS-CG-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---FASGFV 238 (304)
Q Consensus 164 ~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp---~~~~~f 238 (304)
..++.+||-+| +| .|.....+++.. +.+|++++ ++...+.+++ .+ .. .++..+-.+.. .....+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~~~----lG----a~-~v~~~~~~~~~~~~~~~~g~ 249 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELVRK----LG----AD-DVIDYKSGSVEEQLKSLKPF 249 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHH----TT----CS-EEEETTSSCHHHHHHTSCCB
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHHHH----cC----CC-EEEECCchHHHHHHhhcCCC
Confidence 45688999999 34 577777777763 34999999 6666666644 22 11 12221111110 011468
Q ss_pred ceEEecchhccCCCHHHHHHHHHHhcccCcEEEEEE
Q 021975 239 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 239 D~V~~~~vl~h~~d~~~~l~~~~r~LkpgG~lvi~~ 274 (304)
|+|+..- ..+...+....+.|++||+++...
T Consensus 250 D~vid~~-----g~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 250 DFILDNV-----GGSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp SEEEESS-----CTTHHHHGGGGBCSSSCCEEEESC
T ss_pred CEEEECC-----CChhhhhHHHHHhhcCCcEEEEeC
Confidence 9887643 233345677788999999988754
No 475
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=82.32 E-value=5.9 Score=35.32 Aligned_cols=93 Identities=8% Similarity=0.027 Sum_probs=58.9
Q ss_pred cCCCeEEEEcCC--ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CCCCc
Q 021975 165 AQGGLLVDVSCG--SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FASGF 237 (304)
Q Consensus 165 ~~~~~vLDiGcG--~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~~~~ 237 (304)
.++.+||-+|++ .|.....+++.. +.+|+++. +++-.+.+++. + .. .++...-.++. ...+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~~l----G----a~-~vi~~~~~~~~~~v~~~t~g~ 231 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAKSR----G----AE-EVFDYRAPNLAQTIRTYTKNN 231 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHT----T----CS-EEEETTSTTHHHHHHHHTTTC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHHHc----C----Cc-EEEECCCchHHHHHHHHccCC
Confidence 568899999983 688888888774 34899885 78777777652 2 11 22222111110 11245
Q ss_pred cceEEecchhccCCCHHHHHHHHHHhc-ccCcEEEEEE
Q 021975 238 VDAVHAGAALHCWPSPSNAVAEISRIL-RSGGVFVGTT 274 (304)
Q Consensus 238 fD~V~~~~vl~h~~d~~~~l~~~~r~L-kpgG~lvi~~ 274 (304)
+|+|+-.- .. ...+....+.| ++||+++...
T Consensus 232 ~d~v~d~~-----g~-~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 232 LRYALDCI-----TN-VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp CCEEEESS-----CS-HHHHHHHHHHSCTTCEEEEESS
T ss_pred ccEEEECC-----Cc-hHHHHHHHHHhhcCCCEEEEEe
Confidence 89888643 22 24577788888 6999988754
No 476
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=82.18 E-value=16 Score=30.77 Aligned_cols=76 Identities=20% Similarity=0.246 Sum_probs=50.9
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CCCCc
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FASGF 237 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~~~~ 237 (304)
+++++|--|.+.|- ....|++.|. +|+..|.+.. +.+.+.++..+ .++.++.+|+.+.. +..+.
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga--~Vvi~~r~~~--~~~~~~~~~~g----~~~~~~~~Dv~d~~~v~~~~~~g~ 79 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGA--EVVCAARRAP--DETLDIIAKDG----GNASALLIDFADPLAAKDSFTDAG 79 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCC--HHHHHHHHHTT----CCEEEEECCTTSTTTTTTSSTTTC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCC--EEEEEeCCcH--HHHHHHHHHhC----CcEEEEEccCCCHHHHHHHHHhCC
Confidence 47788888877763 4566677776 9999998742 22333344433 67889999986632 44578
Q ss_pred cceEEecchhcc
Q 021975 238 VDAVHAGAALHC 249 (304)
Q Consensus 238 fD~V~~~~vl~h 249 (304)
+|+++.+..+.+
T Consensus 80 iDiLVNNAGi~~ 91 (247)
T 4hp8_A 80 FDILVNNAGIIR 91 (247)
T ss_dssp CCEEEECCCCCC
T ss_pred CCEEEECCCCCC
Confidence 999998765443
No 477
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=82.15 E-value=4.7 Score=34.60 Aligned_cols=101 Identities=19% Similarity=0.215 Sum_probs=68.5
Q ss_pred cCCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC---------
Q 021975 165 AQGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--------- 232 (304)
Q Consensus 165 ~~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp--------- 232 (304)
.+++++|--|.+.|- ....|++.|. +|+.+|.+++.++.+.+.+ + .+...+.+|+.+..
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga--~V~i~~r~~~~l~~~~~~~---g----~~~~~~~~Dv~~~~~v~~~~~~~ 97 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGA--RVFITGRRKDVLDAAIAEI---G----GGAVGIQADSANLAELDRLYEKV 97 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH---C----TTCEEEECCTTCHHHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHc---C----CCeEEEEecCCCHHHHHHHHHHH
Confidence 357888988988773 4566677776 9999999998877665543 2 56778899987742
Q ss_pred -CCCCccceEEecchhccCC-----CHH--------------HHHHHHHHhcccCcEEEEEE
Q 021975 233 -FASGFVDAVHAGAALHCWP-----SPS--------------NAVAEISRILRSGGVFVGTT 274 (304)
Q Consensus 233 -~~~~~fD~V~~~~vl~h~~-----d~~--------------~~l~~~~r~LkpgG~lvi~~ 274 (304)
-.-+..|+++.+..+.... +++ ...+.+.+.|+.+|.++...
T Consensus 98 ~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 98 KAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp HHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred HHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 0124689998876543321 111 24577778888888877654
No 478
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=81.92 E-value=0.57 Score=42.79 Aligned_cols=43 Identities=21% Similarity=0.110 Sum_probs=31.0
Q ss_pred cCCCeEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH
Q 021975 165 AQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYD 208 (304)
Q Consensus 165 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~ 208 (304)
.++.+|+=+|+|. |.....+++.. +.+|+++|.++...+.+++
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQS 213 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCGGGHHHHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH
Confidence 3578999999985 55555555543 2499999999987776644
No 479
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=81.73 E-value=7.6 Score=33.00 Aligned_cols=75 Identities=24% Similarity=0.297 Sum_probs=52.1
Q ss_pred CCCeEEEEcCCcc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC---
Q 021975 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 234 (304)
.++++|-.|++.| .....|++.|. +|+.+|.++..++...+.+ ..++.++.+|+.+.. +.
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGC--HVLCADIDGDAADAAATKI-------GCGAAACRVDVSDEQQIIAMVDACV 98 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHH-------CSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHc-------CCcceEEEecCCCHHHHHHHHHHHH
Confidence 4678888887766 24566667776 9999999988776665543 256888999997742 00
Q ss_pred --CCccceEEecchhcc
Q 021975 235 --SGFVDAVHAGAALHC 249 (304)
Q Consensus 235 --~~~fD~V~~~~vl~h 249 (304)
-+..|+++.+..+.+
T Consensus 99 ~~~g~iD~lvnnAg~~~ 115 (277)
T 3gvc_A 99 AAFGGVDKLVANAGVVH 115 (277)
T ss_dssp HHHSSCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 136899998766543
No 480
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=81.56 E-value=4.3 Score=34.01 Aligned_cols=73 Identities=26% Similarity=0.311 Sum_probs=50.6
Q ss_pred CCCeEEEEcCCcc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC---
Q 021975 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 234 (304)
.++++|-.|++.| .....|++.|. +|+.+|.+....+...+.+ ..++.++.+|+.+.. +.
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~~ 77 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGA--TVAIADIDIERARQAAAEI-------GPAAYAVQMDVTRQDSIDAAIAATV 77 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh-------CCCceEEEeeCCCHHHHHHHHHHHH
Confidence 4678898887665 24556666676 9999999988766655543 256789999997742 10
Q ss_pred --CCccceEEecchh
Q 021975 235 --SGFVDAVHAGAAL 247 (304)
Q Consensus 235 --~~~fD~V~~~~vl 247 (304)
-+.+|+++.+..+
T Consensus 78 ~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 78 EHAGGLDILVNNAAL 92 (259)
T ss_dssp HHSSSCCEEEECCCC
T ss_pred HHcCCCCEEEECCCc
Confidence 1368999987654
No 481
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=81.46 E-value=0.94 Score=27.59 Aligned_cols=33 Identities=18% Similarity=0.552 Sum_probs=20.6
Q ss_pred CCeeeccCCCccccccCCCCccccccccCceeeCCCCccc
Q 021975 58 GDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (304)
Q Consensus 58 ~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (304)
|..+.|-.||..+...+.... ...+|+-||..-
T Consensus 1 ~~iY~C~rCg~~fs~~el~~l-------P~IrCpyCGyri 33 (48)
T 4ayb_P 1 MAVYRCGKCWKTFTDEQLKVL-------PGVRCPYCGYKI 33 (48)
T ss_dssp ----CCCCTTTTCCCCCSCCC-------SSSCCTTTCCSC
T ss_pred CcEEEeeccCCCccHHHHhhC-------CCcccCccCcEE
Confidence 346789999998766543211 567999998653
No 482
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=81.38 E-value=14 Score=30.15 Aligned_cols=77 Identities=21% Similarity=0.172 Sum_probs=52.7
Q ss_pred CCeEEEEcCCcc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHH-hcCccCCCCeEEEEccCCCCC-----CCC--
Q 021975 167 GGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIK-QDNTILTSNLALVRADVCRLP-----FAS-- 235 (304)
Q Consensus 167 ~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~-~~~~~~~~~i~~~~~d~~~lp-----~~~-- 235 (304)
++++|=.|++.| .....|++.|. +|+.++.+.+.++...+.+. .. ..++.++.+|+.+.. +..
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY--ALALGARSVDRLEKIAHELMQEQ----GVEVFYHHLDVSKAESVEEFSKKVL 75 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH----CCCEEEEECCTTCHHHHHHHCC-HH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc----CCeEEEEEeccCCHHHHHHHHHHHH
Confidence 457888887655 24555666676 89999999887777666554 32 367899999997742 111
Q ss_pred ---CccceEEecchhcc
Q 021975 236 ---GFVDAVHAGAALHC 249 (304)
Q Consensus 236 ---~~fD~V~~~~vl~h 249 (304)
+..|+++.+..+.+
T Consensus 76 ~~~g~id~li~~Ag~~~ 92 (235)
T 3l77_A 76 ERFGDVDVVVANAGLGY 92 (235)
T ss_dssp HHHSSCSEEEECCCCCC
T ss_pred HhcCCCCEEEECCcccc
Confidence 36899998766543
No 483
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=81.27 E-value=0.89 Score=27.83 Aligned_cols=37 Identities=11% Similarity=0.319 Sum_probs=20.0
Q ss_pred CCeeeccCCCcccccc-CCCCccccccccCceeeCCCCcc
Q 021975 58 GDLFSCPICYEPLIRK-GPTGLTLGAIYRSGFKCRKCDKT 96 (304)
Q Consensus 58 ~~~l~CP~C~~~l~~~-~~~~~~~~~i~~~~l~C~~C~~~ 96 (304)
|..++|++||--..-. +.. ..... ....++|+.||..
T Consensus 2 m~~y~C~vCGyvyd~~~Gd~-t~f~~-lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 2 MQKYVCNVCGYEYDPAEHDN-VPFDQ-LPDDWCCPVCGVS 39 (46)
T ss_dssp CCCEEETTTCCEECGGGGTT-CCGGG-SCTTCBCTTTCCB
T ss_pred CCEEECCCCCeEEeCCcCCC-cchhh-CCCCCcCcCCCCc
Confidence 5678999999743210 100 00001 1146899999863
No 484
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=81.24 E-value=1.1 Score=34.35 Aligned_cols=40 Identities=15% Similarity=0.253 Sum_probs=31.5
Q ss_pred CCCCccceEEecchhc--cCCCHHHHHHHHHHhcccCcEEEE
Q 021975 233 FASGFVDAVHAGAALH--CWPSPSNAVAEISRILRSGGVFVG 272 (304)
Q Consensus 233 ~~~~~fD~V~~~~vl~--h~~d~~~~l~~~~r~LkpgG~lvi 272 (304)
++..+||.|+...--+ +..-|..++..+...|||||.|..
T Consensus 55 Lp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 55 LENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred CCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 5588999998854322 234458899999999999999986
No 485
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=81.24 E-value=5.1 Score=33.72 Aligned_cols=104 Identities=14% Similarity=0.155 Sum_probs=63.6
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeCC---HHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFS---ENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s---~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~ 234 (304)
.++++|-.|++.|- ....|++.|. +|+.++.+ .+.++...+.++..+ .++.++.+|+.+.. +.
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~ 83 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESV--NLVLHYHQAKDSDTANKLKDELEDQG----AKVALYQSDLSNEEEVAKLFD 83 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSC--EEEEEESCGGGHHHHHHHHHHHHTTT----CEEEEEECCCCSHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecCccCHHHHHHHHHHHHhcC----CcEEEEECCCCCHHHHHHHHH
Confidence 46788988877652 3444555565 89998754 344555555454433 67899999997742 10
Q ss_pred -----CCccceEEecchhccCC-----CHH--------------HHHHHHHHhcccCcEEEEEEe
Q 021975 235 -----SGFVDAVHAGAALHCWP-----SPS--------------NAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 235 -----~~~fD~V~~~~vl~h~~-----d~~--------------~~l~~~~r~LkpgG~lvi~~~ 275 (304)
-+..|+++.+..+.... +++ .+.+.+.+.|+++|.++...-
T Consensus 84 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS 148 (262)
T 3ksu_A 84 FAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIAT 148 (262)
T ss_dssp HHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEec
Confidence 14689999876543221 111 235566667777888776543
No 486
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=80.79 E-value=9.7 Score=31.92 Aligned_cols=76 Identities=20% Similarity=0.213 Sum_probs=56.0
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC---
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 234 (304)
.++++|-.|++.|- ....|++.|. +|+.+|.+++.++...+.+...+ .++.++.+|+.+.. +.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGA--DLVLAARTVERLEDVAKQVTDTG----RRALSVGTDITDDAQVAHLVDETM 83 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHHHhcC----CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 46789999987763 4566677776 99999999988887777766544 67899999998742 10
Q ss_pred --CCccceEEecchh
Q 021975 235 --SGFVDAVHAGAAL 247 (304)
Q Consensus 235 --~~~fD~V~~~~vl 247 (304)
-+..|+++.+...
T Consensus 84 ~~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 84 KAYGRVDVVINNAFR 98 (264)
T ss_dssp HHTSCCSEEEECCCS
T ss_pred HHcCCCcEEEECCCC
Confidence 1468999987643
No 487
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=80.75 E-value=7.6 Score=32.16 Aligned_cols=76 Identities=21% Similarity=0.269 Sum_probs=55.1
Q ss_pred CCCeEEEEcCCcc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC---
Q 021975 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 234 (304)
.++++|=.|++.| .+...|++.|. +|+.+|.++..++...+.++..+ .++.++.+|+.+.. +.
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGA--AVVVADINAEAAEAVAKQIVADG----GTAISVAVDVSDPESAKAMADRTL 81 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC----CcEEEEEccCCCHHHHHHHHHHHH
Confidence 4678898887765 24566666676 99999999988888777766544 67889999997742 00
Q ss_pred --CCccceEEecchh
Q 021975 235 --SGFVDAVHAGAAL 247 (304)
Q Consensus 235 --~~~fD~V~~~~vl 247 (304)
-+.+|+++.+..+
T Consensus 82 ~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 82 AEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCc
Confidence 1368999987654
No 488
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=80.59 E-value=9.1 Score=32.53 Aligned_cols=76 Identities=14% Similarity=0.138 Sum_probs=50.0
Q ss_pred CCCeEEEEcCCcc---HHHHHHHHhCCCCeEEEEeCCH-HHHHHHHHHHH-hcCccCCCCeEEEEccCCC----CC----
Q 021975 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSE-NMLRQCYDFIK-QDNTILTSNLALVRADVCR----LP---- 232 (304)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~-~~~~~a~~~~~-~~~~~~~~~i~~~~~d~~~----lp---- 232 (304)
.++++|-.|++.| .....|++.|. +|+.++.++ ..++...+.+. .. ..++.++.+|+.+ ..
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~----~~~~~~~~~Dv~~~~~~~~~v~~ 95 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGY--RVVIHYHNSAEAAVSLADELNKER----SNTAVVCQADLTNSNVLPASCEE 95 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTC--EEEEEESSCHHHHHHHHHHHHHHS----TTCEEEEECCCSCSTTHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHHHHHHhhc----CCceEEEEeecCCccCCHHHHHH
Confidence 3567888887655 24555666676 999999887 65555555443 22 2578899999987 21
Q ss_pred -CC-----CCccceEEecchh
Q 021975 233 -FA-----SGFVDAVHAGAAL 247 (304)
Q Consensus 233 -~~-----~~~fD~V~~~~vl 247 (304)
+. -+.+|+++.+..+
T Consensus 96 ~~~~~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 96 IINSCFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 00 1368999987654
No 489
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=80.55 E-value=15 Score=26.92 Aligned_cols=90 Identities=10% Similarity=0.189 Sum_probs=52.6
Q ss_pred CCeEEEEcCCc-cH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC----CCCCccce
Q 021975 167 GGLLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----FASGFVDA 240 (304)
Q Consensus 167 ~~~vLDiGcG~-G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----~~~~~fD~ 240 (304)
+.+|+=+|+|. |. +...|.+.+. +|+++|.+++.++..++. .++.++.+|..+.. ..-..+|+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~--~v~~~d~~~~~~~~~~~~---------~~~~~~~~d~~~~~~l~~~~~~~~d~ 72 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH--DIVLIDIDKDICKKASAE---------IDALVINGDCTKIKTLEDAGIEDADM 72 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHH---------CSSEEEESCTTSHHHHHHTTTTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHh---------cCcEEEEcCCCCHHHHHHcCcccCCE
Confidence 35788888864 33 2344445555 899999998876655432 23556777764321 11235788
Q ss_pred EEecchhccCCCH--HHHHHHHHHhcccCcEEEEE
Q 021975 241 VHAGAALHCWPSP--SNAVAEISRILRSGGVFVGT 273 (304)
Q Consensus 241 V~~~~vl~h~~d~--~~~l~~~~r~LkpgG~lvi~ 273 (304)
|+..- ++. ...+.++.+.++++ .++..
T Consensus 73 vi~~~-----~~~~~~~~~~~~~~~~~~~-~ii~~ 101 (140)
T 1lss_A 73 YIAVT-----GKEEVNLMSSLLAKSYGIN-KTIAR 101 (140)
T ss_dssp EEECC-----SCHHHHHHHHHHHHHTTCC-CEEEE
T ss_pred EEEee-----CCchHHHHHHHHHHHcCCC-EEEEE
Confidence 87753 222 23455666677775 44443
No 490
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=80.45 E-value=24 Score=30.63 Aligned_cols=60 Identities=12% Similarity=0.076 Sum_probs=41.3
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEe-CCHHHHHHHHHHHH-hcCccCCCCeEEEEccCCCC
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALD-FSENMLRQCYDFIK-QDNTILTSNLALVRADVCRL 231 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD-~s~~~~~~a~~~~~-~~~~~~~~~i~~~~~d~~~l 231 (304)
.++++|-.|++.|- ....|++.|. +|+.++ .++..++.+.+.+. .. ..++.++.+|+.+.
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~--~Vv~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~Dl~d~ 109 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGY--AVCLHYHRSAAEANALSATLNARR----PNSAITVQADLSNV 109 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHHS----TTCEEEEECCCSSS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhhc----CCeEEEEEeeCCCc
Confidence 35678877766542 3455556666 999999 88887776666554 22 25788999999764
No 491
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae}
Probab=79.73 E-value=0.9 Score=36.16 Aligned_cols=31 Identities=16% Similarity=0.455 Sum_probs=21.3
Q ss_pred CCeeeccCCCcc---ccccCCCCccccccccCceeeCCCCccc
Q 021975 58 GDLFSCPICYEP---LIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (304)
Q Consensus 58 ~~~l~CP~C~~~---l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (304)
.....||.|++. +.... ..+.+.|..||.+.
T Consensus 19 n~~~~CPECGs~~t~IV~D~---------erGE~VCsdCGLVL 52 (197)
T 3k1f_M 19 NIVLTCPECKVYPPKIVERF---------SEGDVVCALCGLVL 52 (197)
T ss_dssp CCCCCCTTTCCSSCCEEEEG---------GGTEEEETTTCBBC
T ss_pred ccCeECcCCCCcCCeEEEeC---------CCCEEEEcCCCCCc
Confidence 344689999982 33211 23789999999874
No 492
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=78.88 E-value=5.8 Score=33.13 Aligned_cols=77 Identities=13% Similarity=0.120 Sum_probs=55.7
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC---
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 234 (304)
.++++|-.|++.|- ....|++.|. +|+.+|.++..++...+.++..+ .++.++.+|+.+.. +.
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGF--TVFAGRRNGEKLAPLVAEIEAAG----GRIVARSLDARNEDEVTAFLNAAD 79 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHHHTT----CEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC----CeEEEEECcCCCHHHHHHHHHHHH
Confidence 46788888887662 4566666776 99999999888777777666554 67899999997742 10
Q ss_pred -CCccceEEecchhc
Q 021975 235 -SGFVDAVHAGAALH 248 (304)
Q Consensus 235 -~~~fD~V~~~~vl~ 248 (304)
.+..|+++.+..+.
T Consensus 80 ~~g~id~lv~nAg~~ 94 (252)
T 3h7a_A 80 AHAPLEVTIFNVGAN 94 (252)
T ss_dssp HHSCEEEEEECCCCC
T ss_pred hhCCceEEEECCCcC
Confidence 14689999876543
No 493
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=78.48 E-value=9.5 Score=31.83 Aligned_cols=77 Identities=17% Similarity=0.222 Sum_probs=55.6
Q ss_pred CCCeEEEEcCCccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC---
Q 021975 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 234 (304)
.++++|-.|++.|- ....|++.|. +|+.+|.+....+...+.++..+ .++.++.+|+.+.. +.
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGA--SVVVTDLKSEGAEAVAAAIRQAG----GKAIGLECNVTDEQHREAVIKAAL 84 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC----CcEEEEECCCCCHHHHHHHHHHHH
Confidence 46788888877652 4566667776 99999999988887777666544 67899999997742 10
Q ss_pred --CCccceEEecchhc
Q 021975 235 --SGFVDAVHAGAALH 248 (304)
Q Consensus 235 --~~~fD~V~~~~vl~ 248 (304)
-+..|+++.+..+.
T Consensus 85 ~~~g~id~lv~nAg~~ 100 (256)
T 3gaf_A 85 DQFGKITVLVNNAGGG 100 (256)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 13689999876543
No 494
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=78.16 E-value=1.8 Score=27.41 Aligned_cols=37 Identities=14% Similarity=0.306 Sum_probs=19.6
Q ss_pred CCeeeccCCCccccccCCCCcccccc--------ccCceeeCCCCcc
Q 021975 58 GDLFSCPICYEPLIRKGPTGLTLGAI--------YRSGFKCRKCDKT 96 (304)
Q Consensus 58 ~~~l~CP~C~~~l~~~~~~~~~~~~i--------~~~~l~C~~C~~~ 96 (304)
|..++|++|+---.- ..+.....| ....++|+.||..
T Consensus 1 m~~y~C~vCGyvYd~--~~Gdp~~gi~pGt~fe~lP~dw~CP~Cg~~ 45 (54)
T 4rxn_A 1 MKKYTCTVCGYIYDP--EDGDPDDGVNPGTDFKDIPDDWVCPLCGVG 45 (54)
T ss_dssp CCCEEETTTCCEECT--TTCBGGGTBCTTCCGGGSCTTCBCTTTCCB
T ss_pred CCceECCCCCeEECC--CcCCcccCcCCCCChhHCCCCCcCcCCCCc
Confidence 456899999873211 001111111 1246899999863
No 495
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=78.15 E-value=0.7 Score=31.69 Aligned_cols=13 Identities=23% Similarity=0.800 Sum_probs=10.1
Q ss_pred CceeeCCCCcccc
Q 021975 86 SGFKCRKCDKTYS 98 (304)
Q Consensus 86 ~~l~C~~C~~~~~ 98 (304)
..+.|+.||..|.
T Consensus 35 p~~~C~~CGE~~~ 47 (78)
T 3ga8_A 35 HGLYCVHCEESIM 47 (78)
T ss_dssp EEEEETTTCCEEC
T ss_pred eeEECCCCCCEEE
Confidence 4678999998763
No 496
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=78.15 E-value=2.4 Score=43.27 Aligned_cols=72 Identities=19% Similarity=0.212 Sum_probs=51.4
Q ss_pred CCCeEEEEcCCccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCC---------------
Q 021975 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR--------------- 230 (304)
Q Consensus 166 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~--------------- 230 (304)
+..+++|+=||.|.+..-|...|....+.++|+++.+++.-+.+. ++..++.+|+..
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~--------p~~~~~~~DI~~l~~~~~~~di~~~~~ 610 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNN--------PGSTVFTEDCNILLKLVMAGETTNSRG 610 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHC--------TTSEEECSCHHHHHHHHHHTCSBCTTC
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC--------CCCccccccHHHHhhhccchhhhhhhh
Confidence 345799999999999999998874236889999999988777653 345556555321
Q ss_pred --CCCCCCccceEEecch
Q 021975 231 --LPFASGFVDAVHAGAA 246 (304)
Q Consensus 231 --lp~~~~~fD~V~~~~v 246 (304)
+| ..+.+|+|+...-
T Consensus 611 ~~lp-~~~~vDll~GGpP 627 (1002)
T 3swr_A 611 QRLP-QKGDVEMLCGGPP 627 (1002)
T ss_dssp CBCC-CTTTCSEEEECCC
T ss_pred hhcc-cCCCeeEEEEcCC
Confidence 22 1346899987543
No 497
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=77.83 E-value=16 Score=30.56 Aligned_cols=101 Identities=25% Similarity=0.275 Sum_probs=61.9
Q ss_pred CCCeEEEEcCCcc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC-----CC---
Q 021975 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 234 (304)
Q Consensus 166 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp-----~~--- 234 (304)
.++++|=.|++.| .....|++.|. +|+.++.++..++...+.+ ..++.++.+|+.+.. +.
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGA--SLVAVDREERLLAEAVAAL-------EAEAIAVVADVSDPKAVEAVFAEAL 75 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTC-------CSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh-------cCceEEEEcCCCCHHHHHHHHHHHH
Confidence 3567888887655 24555666666 9999999987665544321 246888999987642 10
Q ss_pred --CCccceEEecchhccCC-----CHH--------------HHHHHHHHhcccCcEEEEEEe
Q 021975 235 --SGFVDAVHAGAALHCWP-----SPS--------------NAVAEISRILRSGGVFVGTTF 275 (304)
Q Consensus 235 --~~~fD~V~~~~vl~h~~-----d~~--------------~~l~~~~r~LkpgG~lvi~~~ 275 (304)
-+.+|+++.+..+.+.. +++ .+.+.+...++.+|.++...-
T Consensus 76 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 137 (263)
T 2a4k_A 76 EEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGS 137 (263)
T ss_dssp HHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEec
Confidence 13579999876553321 111 134555566644777776543
No 498
>1pqv_S STP-alpha, transcription elongation factor S-II, DNA; mRNA cleavage, proofreading, BACKTRACKING, gene expression, multiprotein complex; 3.80A {Saccharomyces cerevisiae} SCOP: i.8.1.1 PDB: 1eo0_A
Probab=77.74 E-value=0.94 Score=39.83 Aligned_cols=41 Identities=17% Similarity=0.337 Sum_probs=24.9
Q ss_pred cCCeeeccCCCccccc-cCCCCccccccccCceeeCCCCccc
Q 021975 57 EGDLFSCPICYEPLIR-KGPTGLTLGAIYRSGFKCRKCDKTY 97 (304)
Q Consensus 57 ~~~~l~CP~C~~~l~~-~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (304)
.+..+.||.|+..-.. ...+.-..++-+.-.+.|..||+.|
T Consensus 265 ~~~~~~C~~C~~~~~~~~q~Q~rsaDe~~t~f~~C~~Cg~~w 306 (309)
T 1pqv_S 265 VTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 306 (309)
T ss_pred CcccccCCCCCCCeeEEEEeecccCCCCCcEEEEeCCCCCce
Confidence 4557899999985321 1111112233344678999999976
No 499
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=77.31 E-value=10 Score=31.14 Aligned_cols=76 Identities=12% Similarity=0.121 Sum_probs=54.4
Q ss_pred CCeEEEEcCCcc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCC----------C
Q 021975 167 GGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----------F 233 (304)
Q Consensus 167 ~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp----------~ 233 (304)
++++|=.|++.| .....|++.|. +|+.++.++...+...+.++..+ .++.++.+|+.+.. -
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGA--TVVGTATSQASAEKFENSMKEKG----FKARGLVLNISDIESIQNFFAEIKA 78 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC----CceEEEEecCCCHHHHHHHHHHHHH
Confidence 567888887655 24556666676 99999999988887777776654 67899999997742 0
Q ss_pred CCCccceEEecchhc
Q 021975 234 ASGFVDAVHAGAALH 248 (304)
Q Consensus 234 ~~~~fD~V~~~~vl~ 248 (304)
..+.+|+++.+..+.
T Consensus 79 ~~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 79 ENLAIDILVNNAGIT 93 (247)
T ss_dssp TTCCCSEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 123689999876543
No 500
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=77.27 E-value=22 Score=30.48 Aligned_cols=86 Identities=15% Similarity=0.174 Sum_probs=52.0
Q ss_pred CCeEEEEcCCc-cH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCccCCCCeEEEEccCCCCCCCCCccceEEec
Q 021975 167 GGLLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (304)
Q Consensus 167 ~~~vLDiGcG~-G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 244 (304)
..+|.=||+|. |. +...|.+.|. +|+++|.+++.++.+.+. + ......+..+.- ...|+|+..
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~--~V~~~dr~~~~~~~~~~~----g------~~~~~~~~~e~~---~~aDvvi~~ 71 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL--STWGADLNPQACANLLAE----G------ACGAAASAREFA---GVVDALVIL 71 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHT----T------CSEEESSSTTTT---TTCSEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHc----C------CccccCCHHHHH---hcCCEEEEE
Confidence 35788999985 43 4566667776 999999999887776551 2 222234443321 346888774
Q ss_pred chhccCCCHH---HHH---HHHHHhcccCcEEEE
Q 021975 245 AALHCWPSPS---NAV---AEISRILRSGGVFVG 272 (304)
Q Consensus 245 ~vl~h~~d~~---~~l---~~~~r~LkpgG~lvi 272 (304)
++++. .++ +++...+++|.+++-
T Consensus 72 -----vp~~~~~~~v~~~~~~l~~~l~~g~ivv~ 100 (303)
T 3g0o_A 72 -----VVNAAQVRQVLFGEDGVAHLMKPGSAVMV 100 (303)
T ss_dssp -----CSSHHHHHHHHC--CCCGGGSCTTCEEEE
T ss_pred -----CCCHHHHHHHHhChhhHHhhCCCCCEEEe
Confidence 34432 223 444567777766553
Done!