Query 021976
Match_columns 304
No_of_seqs 272 out of 2958
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 12:08:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021976.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021976hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3us3_A Calsequestrin-1; calciu 100.0 1.2E-38 4.1E-43 283.2 27.5 225 55-284 12-246 (367)
2 1sji_A Calsequestrin 2, calseq 100.0 1.8E-38 6.1E-43 280.7 26.8 224 55-284 10-244 (350)
3 3f8u_A Protein disulfide-isome 100.0 1.4E-36 4.7E-41 279.7 26.4 223 57-283 2-235 (481)
4 2r2j_A Thioredoxin domain-cont 100.0 1.2E-36 4E-41 272.1 21.2 223 56-285 5-238 (382)
5 3ed3_A Protein disulfide-isome 100.0 2E-34 6.7E-39 248.6 23.6 228 53-281 14-286 (298)
6 2b5e_A Protein disulfide-isome 100.0 6.6E-34 2.3E-38 263.3 19.0 221 55-288 13-244 (504)
7 3idv_A Protein disulfide-isome 100.0 2.4E-32 8.4E-37 228.9 24.9 207 55-267 14-239 (241)
8 3apo_A DNAJ homolog subfamily 100.0 7.4E-29 2.5E-33 240.7 26.9 218 56-280 440-671 (780)
9 3apo_A DNAJ homolog subfamily 100.0 2.4E-29 8.2E-34 244.2 20.9 220 54-278 114-347 (780)
10 3q6o_A Sulfhydryl oxidase 1; p 99.9 1.4E-25 4.8E-30 188.2 25.5 201 55-261 11-236 (244)
11 1a8l_A Protein disulfide oxido 99.9 2.5E-25 8.7E-30 184.4 20.0 195 63-263 9-224 (226)
12 2ywm_A Glutaredoxin-like prote 99.9 1E-24 3.5E-29 181.2 20.9 192 64-263 9-218 (229)
13 2ppt_A Thioredoxin-2; thiredox 99.9 1.3E-24 4.3E-29 169.5 16.9 136 27-162 18-153 (155)
14 3uem_A Protein disulfide-isome 99.9 3.8E-24 1.3E-28 189.7 22.0 206 56-265 117-357 (361)
15 3t58_A Sulfhydryl oxidase 1; o 99.9 3.2E-23 1.1E-27 190.5 26.2 202 55-262 11-237 (519)
16 3zzx_A Thioredoxin; oxidoreduc 99.9 2.1E-24 7.2E-29 156.7 14.2 96 62-159 7-104 (105)
17 3p2a_A Thioredoxin 2, putative 99.9 3.5E-24 1.2E-28 165.8 16.3 136 27-162 9-144 (148)
18 3gnj_A Thioredoxin domain prot 99.9 3.1E-23 1.1E-27 152.2 15.6 106 56-161 4-110 (111)
19 2qsi_A Putative hydrogenase ex 99.9 9.2E-24 3.2E-28 158.2 12.8 105 56-160 15-122 (137)
20 3h79_A Thioredoxin-like protei 99.9 1.3E-23 4.6E-28 158.2 13.8 105 55-159 14-126 (127)
21 2qgv_A Hydrogenase-1 operon pr 99.9 6.1E-24 2.1E-28 159.7 10.6 108 57-164 18-128 (140)
22 2voc_A Thioredoxin; electron t 99.9 3.2E-23 1.1E-27 152.6 13.9 106 57-163 2-107 (112)
23 3tco_A Thioredoxin (TRXA-1); d 99.9 6.5E-23 2.2E-27 149.8 14.7 105 56-160 4-108 (109)
24 2dj1_A Protein disulfide-isome 99.9 9.2E-23 3.1E-27 156.2 15.2 112 54-166 15-129 (140)
25 2trx_A Thioredoxin; electron t 99.9 1.1E-22 3.9E-27 148.4 15.0 105 56-160 2-107 (108)
26 3die_A Thioredoxin, TRX; elect 99.9 1E-22 3.6E-27 148.0 14.5 103 56-159 3-105 (106)
27 2av4_A Thioredoxin-like protei 99.9 3E-23 1E-27 157.7 11.7 103 58-160 23-138 (160)
28 1nsw_A Thioredoxin, TRX; therm 99.9 1.1E-22 3.7E-27 147.8 13.8 103 58-160 2-104 (105)
29 3qfa_C Thioredoxin; protein-pr 99.9 6.5E-23 2.2E-27 151.9 12.5 103 56-160 12-116 (116)
30 1w4v_A Thioredoxin, mitochondr 99.9 2.5E-22 8.5E-27 149.5 15.0 107 54-160 11-118 (119)
31 3hz4_A Thioredoxin; NYSGXRC, P 99.9 2E-22 6.7E-27 154.4 14.4 107 55-161 5-112 (140)
32 2yzu_A Thioredoxin; redox prot 99.9 2.4E-22 8.4E-27 146.7 13.8 105 57-161 2-106 (109)
33 1x5d_A Protein disulfide-isome 99.9 2.7E-22 9.3E-27 152.1 14.5 107 55-161 6-117 (133)
34 1t00_A Thioredoxin, TRX; redox 99.9 4.5E-22 1.6E-26 146.2 15.3 106 56-161 5-111 (112)
35 2i4a_A Thioredoxin; acidophIle 99.9 3.9E-22 1.3E-26 145.2 14.5 104 56-159 2-106 (107)
36 3uvt_A Thioredoxin domain-cont 99.9 2.6E-22 8.8E-27 147.2 13.6 103 56-159 5-110 (111)
37 1thx_A Thioredoxin, thioredoxi 99.9 8E-22 2.7E-26 145.5 15.7 106 56-161 7-113 (115)
38 2e0q_A Thioredoxin; electron t 99.9 4.9E-22 1.7E-26 143.7 14.3 103 58-161 1-103 (104)
39 1x5e_A Thioredoxin domain cont 99.9 4E-22 1.4E-26 149.9 14.2 110 55-167 6-116 (126)
40 3apq_A DNAJ homolog subfamily 99.9 1.7E-22 5.9E-27 165.5 13.1 115 54-168 95-209 (210)
41 2o8v_B Thioredoxin 1; disulfid 99.9 2.8E-22 9.5E-27 151.2 13.1 105 56-160 22-127 (128)
42 3f3q_A Thioredoxin-1; His TAG, 99.9 8.1E-22 2.8E-26 144.3 14.9 103 56-160 7-109 (109)
43 1dby_A Chloroplast thioredoxin 99.9 5.5E-22 1.9E-26 144.5 13.9 104 57-160 2-106 (107)
44 4euy_A Uncharacterized protein 99.9 8.9E-23 3.1E-27 148.4 9.2 98 62-160 7-104 (105)
45 1v98_A Thioredoxin; oxidoreduc 99.9 7.1E-22 2.4E-26 151.3 14.1 131 29-161 8-138 (140)
46 2dml_A Protein disulfide-isome 99.9 7E-22 2.4E-26 149.2 13.4 107 55-161 16-124 (130)
47 1fb6_A Thioredoxin M; electron 99.9 1.6E-21 5.6E-26 141.4 14.8 103 58-160 2-105 (105)
48 1mek_A Protein disulfide isome 99.9 1.1E-22 3.7E-27 151.2 8.7 109 55-163 6-119 (120)
49 1gh2_A Thioredoxin-like protei 99.9 1.6E-21 5.4E-26 142.2 14.7 102 58-161 3-107 (107)
50 1ep7_A Thioredoxin CH1, H-type 99.9 1.5E-21 5.2E-26 143.4 14.2 104 57-161 3-111 (112)
51 2pu9_C TRX-F, thioredoxin F-ty 99.9 2E-21 6.9E-26 142.6 14.6 104 55-160 4-110 (111)
52 3ga4_A Dolichyl-diphosphooligo 99.9 8.8E-22 3E-26 154.7 13.2 111 55-165 17-157 (178)
53 1r26_A Thioredoxin; redox-acti 99.9 2.3E-21 7.8E-26 145.5 14.8 103 57-161 20-123 (125)
54 2l5l_A Thioredoxin; structural 99.9 2.1E-21 7E-26 148.0 14.7 107 56-163 9-128 (136)
55 2i1u_A Thioredoxin, TRX, MPT46 99.9 1.4E-21 4.8E-26 145.6 13.4 106 55-160 11-117 (121)
56 1syr_A Thioredoxin; SGPP, stru 99.9 1.8E-21 6E-26 143.2 13.4 104 55-160 8-111 (112)
57 3hxs_A Thioredoxin, TRXP; elec 99.9 1.4E-21 4.9E-26 149.7 13.3 107 54-161 20-139 (141)
58 3aps_A DNAJ homolog subfamily 99.9 6.4E-22 2.2E-26 147.8 10.8 108 56-163 3-115 (122)
59 3qou_A Protein YBBN; thioredox 99.9 2E-21 7E-26 166.7 15.1 107 55-161 6-114 (287)
60 3d6i_A Monothiol glutaredoxin- 99.9 3E-21 1E-25 141.8 13.9 103 58-161 2-109 (112)
61 2hls_A Protein disulfide oxido 99.9 1.2E-20 4E-25 157.9 18.9 189 64-264 15-225 (243)
62 1xwb_A Thioredoxin; dimerizati 99.9 4.2E-21 1.4E-25 139.4 14.2 101 58-159 2-105 (106)
63 2vlu_A Thioredoxin, thioredoxi 99.9 4.6E-21 1.6E-25 143.1 14.7 104 56-161 13-120 (122)
64 3m9j_A Thioredoxin; oxidoreduc 99.9 4.9E-21 1.7E-25 138.9 14.1 97 62-160 7-105 (105)
65 3ul3_B Thioredoxin, thioredoxi 99.9 9E-22 3.1E-26 148.4 10.1 98 61-158 30-127 (128)
66 3dxb_A Thioredoxin N-terminall 99.9 4.6E-21 1.6E-25 158.3 14.9 110 54-163 10-120 (222)
67 3gix_A Thioredoxin-like protei 99.9 2.7E-21 9.3E-26 149.5 12.6 100 61-160 9-120 (149)
68 3emx_A Thioredoxin; structural 99.9 1.7E-21 5.8E-26 148.2 11.3 106 55-164 15-129 (135)
69 1oaz_A Thioredoxin 1; immune s 99.9 5.6E-22 1.9E-26 148.4 8.4 105 56-160 3-122 (123)
70 1faa_A Thioredoxin F; electron 99.9 9.3E-21 3.2E-25 141.9 14.8 103 56-160 18-123 (124)
71 2xc2_A Thioredoxinn; oxidoredu 99.9 5.5E-21 1.9E-25 141.6 13.3 101 57-160 14-117 (117)
72 2l6c_A Thioredoxin; oxidoreduc 99.9 2.7E-21 9.2E-26 141.8 11.1 103 58-162 5-107 (110)
73 2oe3_A Thioredoxin-3; electron 99.9 5.4E-21 1.9E-25 141.1 12.6 100 57-158 13-113 (114)
74 2wz9_A Glutaredoxin-3; protein 99.9 9.7E-21 3.3E-25 147.2 14.7 105 56-162 12-119 (153)
75 2djj_A PDI, protein disulfide- 99.9 1.1E-21 3.7E-26 146.2 8.7 107 54-163 5-119 (121)
76 2vim_A Thioredoxin, TRX; thior 99.9 1.4E-20 4.9E-25 136.1 14.5 100 59-160 2-104 (104)
77 2es7_A Q8ZP25_salty, putative 99.9 1.2E-21 4E-26 149.9 9.0 111 57-168 18-132 (142)
78 1xfl_A Thioredoxin H1; AT3G510 99.9 1.3E-20 4.3E-25 141.2 14.5 105 54-160 14-123 (124)
79 2l57_A Uncharacterized protein 99.9 4.2E-21 1.5E-25 144.2 11.8 106 58-163 6-119 (126)
80 1zma_A Bacterocin transport ac 99.8 3.1E-21 1E-25 143.3 9.6 102 56-157 12-117 (118)
81 3evi_A Phosducin-like protein 99.8 1.5E-20 5.3E-25 138.8 12.7 100 56-159 3-112 (118)
82 2j23_A Thioredoxin; immune pro 99.8 1.6E-20 5.6E-25 140.0 12.7 104 56-160 15-120 (121)
83 2dj0_A Thioredoxin-related tra 99.8 6.3E-22 2.2E-26 151.0 4.5 104 56-159 7-119 (137)
84 3d22_A TRXH4, thioredoxin H-ty 99.8 4.7E-20 1.6E-24 140.9 14.7 106 55-162 23-133 (139)
85 2dj3_A Protein disulfide-isome 99.8 1.7E-21 5.9E-26 147.7 6.6 111 54-164 5-121 (133)
86 2vm1_A Thioredoxin, thioredoxi 99.8 6.6E-20 2.3E-24 135.8 14.5 105 56-162 6-115 (118)
87 1qgv_A Spliceosomal protein U5 99.8 2.4E-20 8.1E-25 143.0 11.5 99 62-160 10-120 (142)
88 2f51_A Thioredoxin; electron t 99.8 5.4E-20 1.9E-24 136.5 13.1 106 56-163 3-115 (118)
89 3idv_A Protein disulfide-isome 99.8 6.7E-20 2.3E-24 153.0 14.8 109 55-164 129-240 (241)
90 1ti3_A Thioredoxin H, PTTRXH1; 99.8 4.7E-20 1.6E-24 135.5 11.9 103 56-160 4-111 (113)
91 3cxg_A Putative thioredoxin; m 99.8 4.4E-20 1.5E-24 140.0 11.2 104 55-161 19-129 (133)
92 2dbc_A PDCL2, unnamed protein 99.8 2E-19 6.7E-24 136.8 12.0 101 56-160 10-120 (135)
93 1a8l_A Protein disulfide oxido 99.8 4.8E-19 1.6E-23 146.5 13.9 104 57-160 117-225 (226)
94 2kuc_A Putative disulphide-iso 99.8 2.6E-19 8.9E-24 135.0 10.9 106 58-163 8-123 (130)
95 2c0g_A ERP29 homolog, windbeut 99.8 7.1E-19 2.4E-23 146.2 14.4 118 55-177 15-148 (248)
96 2yj7_A LPBCA thioredoxin; oxid 99.7 4.4E-21 1.5E-25 139.1 0.0 102 58-159 3-105 (106)
97 3fk8_A Disulphide isomerase; A 99.8 7.1E-19 2.4E-23 133.2 10.7 92 69-160 25-132 (133)
98 3f8u_A Protein disulfide-isome 99.8 9.3E-19 3.2E-23 160.8 12.9 117 49-166 345-466 (481)
99 2qc7_A ERP31, ERP28, endoplasm 99.8 3.7E-18 1.3E-22 141.4 13.9 101 56-160 5-118 (240)
100 2fwh_A Thiol:disulfide interch 99.8 8.7E-19 3E-23 133.0 9.0 100 61-161 17-128 (134)
101 2trc_P Phosducin, MEKA, PP33; 99.8 8.9E-19 3E-23 143.5 8.1 104 55-160 98-212 (217)
102 4f9z_D Endoplasmic reticulum r 99.8 1.7E-16 5.7E-21 131.3 21.6 196 57-262 10-222 (227)
103 1a0r_P Phosducin, MEKA, PP33; 99.8 3.5E-18 1.2E-22 141.9 10.7 104 55-160 111-225 (245)
104 1fo5_A Thioredoxin; disulfide 99.7 2.4E-18 8E-23 119.6 7.8 83 74-160 3-85 (85)
105 1nho_A Probable thioredoxin; b 99.7 2.5E-18 8.5E-23 119.5 7.4 82 75-160 3-84 (85)
106 3iv4_A Putative oxidoreductase 99.7 1.1E-17 3.7E-22 120.2 10.8 98 57-156 7-111 (112)
107 1wmj_A Thioredoxin H-type; str 99.7 1.9E-19 6.4E-24 135.7 1.6 106 56-163 14-124 (130)
108 1wou_A Thioredoxin -related pr 99.7 4.7E-18 1.6E-22 127.0 8.5 101 57-158 6-122 (123)
109 3f9u_A Putative exported cytoc 99.7 3.4E-18 1.2E-22 135.4 8.0 102 59-160 29-165 (172)
110 2djk_A PDI, protein disulfide- 99.7 9.1E-18 3.1E-22 127.2 9.8 106 57-164 7-118 (133)
111 2b5e_A Protein disulfide-isome 99.7 9.1E-18 3.1E-22 155.1 11.6 110 53-164 355-470 (504)
112 3qcp_A QSOX from trypanosoma b 99.7 7.2E-19 2.5E-23 157.8 3.2 97 55-151 22-130 (470)
113 2ju5_A Thioredoxin disulfide i 99.7 4.1E-17 1.4E-21 126.7 10.9 90 71-161 45-152 (154)
114 3dml_A Putative uncharacterize 99.7 1.7E-17 5.7E-22 120.9 8.0 89 72-160 17-109 (116)
115 2ywm_A Glutaredoxin-like prote 99.7 4E-17 1.4E-21 135.2 11.2 102 56-161 118-220 (229)
116 3uem_A Protein disulfide-isome 99.7 6.4E-15 2.2E-19 130.2 26.1 215 56-281 17-264 (361)
117 2lst_A Thioredoxin; structural 99.6 6E-19 2.1E-23 133.0 0.0 99 63-161 9-116 (130)
118 1lu4_A Soluble secreted antige 99.7 7.9E-17 2.7E-21 121.9 11.1 100 59-160 10-135 (136)
119 2b5x_A YKUV protein, TRXY; thi 99.7 1.9E-16 6.5E-21 121.6 13.1 103 59-161 15-145 (148)
120 1zzo_A RV1677; thioredoxin fol 99.7 1.6E-16 5.6E-21 120.0 12.0 102 58-161 10-135 (136)
121 3kp8_A Vkorc1/thioredoxin doma 99.7 1.2E-17 4.2E-22 121.0 5.1 75 72-157 11-91 (106)
122 2hls_A Protein disulfide oxido 99.7 3E-16 1E-20 131.1 13.6 100 61-164 125-229 (243)
123 1sen_A Thioredoxin-like protei 99.7 1.7E-17 5.8E-22 130.3 3.8 97 64-160 37-147 (164)
124 3or5_A Thiol:disulfide interch 99.7 7.1E-16 2.4E-20 120.8 12.7 106 58-163 19-153 (165)
125 2h30_A Thioredoxin, peptide me 99.7 3.4E-16 1.2E-20 122.5 10.8 105 57-161 22-156 (164)
126 3raz_A Thioredoxin-related pro 99.7 4.7E-16 1.6E-20 120.1 11.4 92 72-163 23-142 (151)
127 2f9s_A Thiol-disulfide oxidore 99.7 8.3E-16 2.8E-20 118.7 12.0 92 72-163 25-140 (151)
128 1ilo_A Conserved hypothetical 99.6 5.9E-16 2E-20 105.3 8.9 74 76-156 2-76 (77)
129 3lor_A Thiol-disulfide isomera 99.6 1.9E-15 6.5E-20 117.7 12.5 91 72-162 29-156 (160)
130 3erw_A Sporulation thiol-disul 99.6 1.6E-15 5.3E-20 116.0 11.5 85 72-156 33-144 (145)
131 3eyt_A Uncharacterized protein 99.6 2.3E-15 8E-20 117.0 12.5 91 72-162 27-153 (158)
132 3ia1_A THIO-disulfide isomeras 99.6 2E-15 6.9E-20 116.9 11.5 88 74-163 31-146 (154)
133 1z6n_A Hypothetical protein PA 99.6 7.9E-16 2.7E-20 120.6 9.2 95 60-157 40-139 (167)
134 2lja_A Putative thiol-disulfid 99.6 1E-15 3.5E-20 118.2 9.4 92 72-163 29-145 (152)
135 4evm_A Thioredoxin family prot 99.6 2.3E-15 7.8E-20 113.7 10.9 88 72-159 21-137 (138)
136 3hcz_A Possible thiol-disulfid 99.6 1.4E-15 4.7E-20 116.8 8.9 89 72-160 30-145 (148)
137 3ira_A Conserved protein; meth 99.6 8.2E-16 2.8E-20 120.7 7.5 83 60-142 26-120 (173)
138 3ph9_A Anterior gradient prote 99.6 9.7E-16 3.3E-20 117.9 7.4 95 65-160 36-144 (151)
139 1sji_A Calsequestrin 2, calseq 99.6 1.2E-13 3.9E-18 121.7 21.7 198 56-263 123-344 (350)
140 3gl3_A Putative thiol:disulfid 99.6 9.3E-15 3.2E-19 112.8 12.9 91 72-162 27-143 (152)
141 2l5o_A Putative thioredoxin; s 99.6 3.6E-15 1.2E-19 115.2 10.4 91 72-162 27-142 (153)
142 4f9z_D Endoplasmic reticulum r 99.6 9.1E-15 3.1E-19 120.8 12.9 122 162-287 9-135 (227)
143 2lrn_A Thiol:disulfide interch 99.6 5.5E-15 1.9E-19 114.3 10.6 87 72-161 28-141 (152)
144 3hdc_A Thioredoxin family prot 99.6 7.3E-15 2.5E-19 114.3 11.3 103 59-161 27-152 (158)
145 3ec3_A Protein disulfide-isome 99.6 1E-14 3.6E-19 122.3 12.9 122 159-285 3-134 (250)
146 2lrt_A Uncharacterized protein 99.6 1.3E-14 4.4E-19 112.3 12.1 86 72-157 34-144 (152)
147 3fkf_A Thiol-disulfide oxidore 99.6 6E-15 2.1E-19 113.1 10.1 87 72-161 32-146 (148)
148 3us3_A Calsequestrin-1; calciu 99.6 1.3E-13 4.3E-18 122.1 19.7 199 56-263 125-346 (367)
149 3lwa_A Secreted thiol-disulfid 99.6 1.2E-14 4.3E-19 115.8 11.9 90 72-161 58-181 (183)
150 2b1k_A Thiol:disulfide interch 99.6 6.9E-15 2.4E-19 115.6 9.7 100 58-160 33-159 (168)
151 3eur_A Uncharacterized protein 99.6 8.3E-15 2.8E-19 111.9 9.9 83 72-157 30-141 (142)
152 3ewl_A Uncharacterized conserv 99.6 7.5E-15 2.6E-19 112.0 9.4 86 72-160 26-140 (142)
153 2h8l_A Protein disulfide-isome 99.6 1.5E-14 5.1E-19 121.5 12.1 121 158-282 2-130 (252)
154 2h8l_A Protein disulfide-isome 99.6 2.9E-13 1E-17 113.6 19.9 196 56-262 6-227 (252)
155 3ha9_A Uncharacterized thiored 99.6 1.3E-14 4.3E-19 113.8 10.7 86 72-160 36-163 (165)
156 1kng_A Thiol:disulfide interch 99.6 1E-14 3.5E-19 113.0 10.0 95 64-160 33-151 (156)
157 3kh7_A Thiol:disulfide interch 99.6 2.7E-14 9.3E-19 113.2 11.9 88 71-161 56-167 (176)
158 3kcm_A Thioredoxin family prot 99.6 1.6E-14 5.6E-19 111.6 10.1 90 72-161 27-143 (154)
159 2fgx_A Putative thioredoxin; N 99.6 1.1E-14 3.7E-19 104.6 8.1 77 75-156 30-106 (107)
160 1ttz_A Conserved hypothetical 99.5 8.2E-15 2.8E-19 101.7 6.6 74 77-160 3-76 (87)
161 1jfu_A Thiol:disulfide interch 99.5 6.6E-14 2.2E-18 111.9 11.9 92 72-163 59-182 (186)
162 3fw2_A Thiol-disulfide oxidore 99.5 7.2E-14 2.5E-18 107.6 11.4 86 72-160 32-147 (150)
163 1i5g_A Tryparedoxin II; electr 99.5 5.7E-14 2E-18 107.4 10.2 86 58-143 13-126 (144)
164 2hyx_A Protein DIPZ; thioredox 99.5 9.5E-14 3.2E-18 121.4 12.8 89 72-160 81-198 (352)
165 3s9f_A Tryparedoxin; thioredox 99.5 6.5E-14 2.2E-18 109.9 9.6 72 72-143 47-146 (165)
166 2ywi_A Hypothetical conserved 99.5 8.5E-14 2.9E-18 112.2 10.3 91 72-162 44-175 (196)
167 1o8x_A Tryparedoxin, TRYX, TXN 99.5 5.7E-14 1.9E-18 107.7 8.8 72 72-143 27-126 (146)
168 2cvb_A Probable thiol-disulfid 99.5 1.3E-13 4.3E-18 110.4 10.7 91 72-162 32-160 (188)
169 3ec3_A Protein disulfide-isome 99.5 8.1E-12 2.8E-16 104.6 21.3 195 56-262 6-225 (250)
170 4fo5_A Thioredoxin-like protei 99.5 1.3E-13 4.5E-18 105.3 9.5 83 72-157 31-141 (143)
171 1o73_A Tryparedoxin; electron 99.5 1.3E-13 4.5E-18 105.3 9.1 72 72-143 27-126 (144)
172 2ggt_A SCO1 protein homolog, m 99.5 3.5E-13 1.2E-17 105.2 10.6 90 72-161 22-161 (164)
173 2rli_A SCO2 protein homolog, m 99.5 4.6E-13 1.6E-17 105.3 11.1 90 72-161 25-164 (171)
174 2l4c_A Endoplasmic reticulum r 99.4 4.5E-13 1.6E-17 99.3 9.1 104 158-265 15-124 (124)
175 3dwv_A Glutathione peroxidase- 99.4 9.9E-13 3.4E-17 105.2 11.2 104 58-161 31-183 (187)
176 3cmi_A Peroxiredoxin HYR1; thi 99.4 4.4E-13 1.5E-17 105.6 8.9 89 72-161 31-168 (171)
177 3u5r_E Uncharacterized protein 99.4 1E-12 3.5E-17 107.8 11.3 105 58-162 43-188 (218)
178 2vup_A Glutathione peroxidase- 99.4 1.3E-12 4.4E-17 104.8 11.6 90 72-161 47-185 (190)
179 3drn_A Peroxiredoxin, bacterio 99.4 1.8E-12 6E-17 101.1 11.2 75 72-146 27-130 (161)
180 2dlx_A UBX domain-containing p 99.4 1.4E-12 4.8E-17 100.3 10.0 96 64-160 29-135 (153)
181 2k6v_A Putative cytochrome C o 99.4 5.8E-13 2E-17 104.8 7.7 88 72-159 34-171 (172)
182 2p5q_A Glutathione peroxidase 99.4 1.1E-12 3.7E-17 103.0 9.1 90 72-161 31-168 (170)
183 3kp9_A Vkorc1/thioredoxin doma 99.4 1.1E-13 3.7E-18 117.2 3.4 81 64-157 190-276 (291)
184 2v1m_A Glutathione peroxidase; 99.4 1.4E-12 4.9E-17 102.2 9.6 90 72-161 30-167 (169)
185 2ls5_A Uncharacterized protein 99.1 3.4E-14 1.1E-18 110.6 0.0 88 72-160 32-147 (159)
186 2r2j_A Thioredoxin domain-cont 99.4 4.2E-11 1.4E-15 106.5 20.0 193 57-262 119-326 (382)
187 2e7p_A Glutaredoxin; thioredox 99.4 1.7E-13 5.7E-18 100.8 3.6 88 64-159 11-106 (116)
188 2p31_A CL683, glutathione pero 99.4 1.4E-12 5E-17 103.7 8.4 89 72-160 48-180 (181)
189 2f8a_A Glutathione peroxidase 99.4 2E-12 6.8E-17 105.2 9.0 89 72-160 46-206 (208)
190 2lus_A Thioredoxion; CR-Trp16, 99.0 7.8E-14 2.7E-18 106.3 0.0 71 72-142 24-124 (143)
191 1zof_A Alkyl hydroperoxide-red 99.3 3E-12 1E-16 103.4 9.0 89 72-160 32-160 (198)
192 2bmx_A Alkyl hydroperoxidase C 99.3 4.6E-12 1.6E-16 102.0 10.0 90 72-161 44-170 (195)
193 1we0_A Alkyl hydroperoxide red 99.3 3.6E-12 1.2E-16 101.9 9.0 89 72-160 30-156 (187)
194 1xvw_A Hypothetical protein RV 99.3 5.3E-12 1.8E-16 98.1 9.5 87 72-158 34-157 (160)
195 3kij_A Probable glutathione pe 99.3 3.5E-12 1.2E-16 101.3 8.4 89 72-160 37-169 (180)
196 2obi_A PHGPX, GPX-4, phospholi 99.3 3.7E-12 1.3E-16 101.5 8.1 88 72-159 46-182 (183)
197 2gs3_A PHGPX, GPX-4, phospholi 99.3 4.5E-12 1.5E-16 101.2 8.5 88 72-159 48-184 (185)
198 1wjk_A C330018D20RIK protein; 99.3 5.1E-12 1.8E-16 90.2 7.4 79 73-160 15-95 (100)
199 1hyu_A AHPF, alkyl hydroperoxi 99.3 2E-11 6.9E-16 112.9 12.7 96 59-159 102-198 (521)
200 1nm3_A Protein HI0572; hybrid, 99.3 1.7E-10 5.7E-15 96.0 16.5 143 72-235 32-224 (241)
201 1ego_A Glutaredoxin; electron 99.2 2.5E-11 8.5E-16 83.8 8.3 76 76-160 2-83 (85)
202 2k8s_A Thioredoxin; dimer, str 99.2 4.8E-12 1.6E-16 86.5 4.6 63 76-140 3-66 (80)
203 1qmv_A Human thioredoxin perox 99.2 4.1E-11 1.4E-15 96.5 10.7 89 72-160 33-162 (197)
204 2b7k_A SCO1 protein; metalloch 99.2 4.7E-11 1.6E-15 96.5 9.9 90 72-161 40-179 (200)
205 2jsy_A Probable thiol peroxida 99.2 8.1E-11 2.8E-15 92.1 10.9 88 72-160 43-166 (167)
206 1uul_A Tryparedoxin peroxidase 99.2 4.4E-11 1.5E-15 96.8 9.4 89 72-160 35-164 (202)
207 2i3y_A Epididymal secretory gl 99.2 1.5E-10 5.1E-15 94.4 12.1 89 72-161 55-211 (215)
208 1zye_A Thioredoxin-dependent p 99.2 4.1E-11 1.4E-15 98.3 8.8 89 72-160 55-184 (220)
209 2i81_A 2-Cys peroxiredoxin; st 99.2 8.3E-11 2.8E-15 95.9 10.2 89 72-160 51-179 (213)
210 2h01_A 2-Cys peroxiredoxin; th 99.2 5.5E-11 1.9E-15 95.4 9.0 89 72-160 30-158 (192)
211 1xzo_A BSSCO, hypothetical pro 99.2 9.3E-11 3.2E-15 92.2 10.1 90 72-161 32-172 (174)
212 3ztl_A Thioredoxin peroxidase; 99.2 1.6E-10 5.5E-15 94.9 11.3 87 72-158 68-195 (222)
213 3gkn_A Bacterioferritin comigr 99.2 1.6E-10 5.5E-15 89.9 9.8 88 72-159 34-160 (163)
214 1xvq_A Thiol peroxidase; thior 99.2 1.4E-10 4.8E-15 91.6 9.4 72 72-145 43-147 (175)
215 2r37_A Glutathione peroxidase 99.1 2.4E-10 8.1E-15 92.7 10.4 88 72-160 37-192 (207)
216 3gyk_A 27KDA outer membrane pr 99.1 3.1E-10 1.1E-14 89.5 10.3 83 72-160 21-172 (175)
217 1eej_A Thiol:disulfide interch 99.1 1.4E-10 4.7E-15 94.9 8.4 82 72-160 85-210 (216)
218 2a4v_A Peroxiredoxin DOT5; yea 99.1 7.9E-10 2.7E-14 85.7 11.2 76 73-150 35-140 (159)
219 3zzx_A Thioredoxin; oxidoreduc 99.1 8E-10 2.7E-14 79.5 10.0 96 164-264 2-105 (105)
220 4g2e_A Peroxiredoxin; redox pr 99.1 1.3E-10 4.3E-15 90.2 6.0 87 72-158 29-155 (157)
221 3ixr_A Bacterioferritin comigr 99.0 1.5E-09 5.2E-14 85.9 10.8 102 58-159 36-176 (179)
222 2c0d_A Thioredoxin peroxidase 99.0 9.7E-10 3.3E-14 90.0 9.8 89 72-160 55-183 (221)
223 1t3b_A Thiol:disulfide interch 99.0 5.4E-10 1.9E-14 90.9 8.0 80 72-158 85-208 (211)
224 1n8j_A AHPC, alkyl hydroperoxi 99.0 1.9E-09 6.6E-14 85.9 10.7 89 72-160 29-155 (186)
225 1psq_A Probable thiol peroxida 99.0 2.1E-09 7.2E-14 83.7 10.5 86 72-158 41-162 (163)
226 4gqc_A Thiol peroxidase, perox 99.0 1.9E-10 6.5E-15 89.8 4.4 96 66-161 26-160 (164)
227 3me7_A Putative uncharacterize 99.0 2.7E-09 9.2E-14 83.7 11.0 91 72-162 27-163 (170)
228 2pn8_A Peroxiredoxin-4; thiore 99.0 2.2E-09 7.4E-14 87.4 10.7 89 72-160 47-176 (211)
229 3a2v_A Probable peroxiredoxin; 99.0 2.4E-09 8E-14 89.0 9.4 94 67-160 27-161 (249)
230 2l4c_A Endoplasmic reticulum r 98.9 1.8E-08 6.3E-13 74.4 12.8 96 56-159 21-122 (124)
231 3h93_A Thiol:disulfide interch 98.9 2.8E-09 9.7E-14 85.3 9.0 87 72-160 24-183 (192)
232 1tp9_A Peroxiredoxin, PRX D (t 98.9 4.1E-09 1.4E-13 82.0 9.5 75 72-146 34-146 (162)
233 3qpm_A Peroxiredoxin; oxidored 98.9 4.1E-09 1.4E-13 87.4 10.1 88 72-159 76-204 (240)
234 3uma_A Hypothetical peroxiredo 98.9 7.3E-09 2.5E-13 82.3 10.5 75 72-146 55-167 (184)
235 1kte_A Thioltransferase; redox 98.9 1.1E-09 3.7E-14 78.7 5.1 72 64-142 3-81 (105)
236 1h75_A Glutaredoxin-like prote 98.9 1.4E-09 4.8E-14 74.1 5.3 70 77-158 3-75 (81)
237 2yzh_A Probable thiol peroxida 98.9 4.6E-09 1.6E-13 82.4 8.8 86 72-159 46-170 (171)
238 2qc7_A ERP31, ERP28, endoplasm 98.9 1.1E-08 3.8E-13 84.4 11.4 97 163-264 6-118 (240)
239 1r7h_A NRDH-redoxin; thioredox 98.9 8.5E-09 2.9E-13 68.9 8.7 68 77-156 3-73 (75)
240 1v58_A Thiol:disulfide interch 98.9 6.8E-09 2.3E-13 86.2 9.9 85 73-160 97-232 (241)
241 3h79_A Thioredoxin-like protei 98.9 1.8E-08 6E-13 74.9 11.1 99 161-263 14-126 (127)
242 3p7x_A Probable thiol peroxida 98.9 6.3E-09 2.1E-13 81.2 8.9 85 72-158 45-165 (166)
243 3ed3_A Protein disulfide-isome 98.9 4.3E-08 1.5E-12 83.9 14.8 118 162-283 17-161 (298)
244 2wfc_A Peroxiredoxin 5, PRDX5; 98.9 1E-08 3.5E-13 80.2 9.7 75 72-146 30-142 (167)
245 1q98_A Thiol peroxidase, TPX; 98.9 7.7E-09 2.7E-13 80.6 8.7 73 72-145 42-148 (165)
246 3hd5_A Thiol:disulfide interch 98.9 8.7E-09 3E-13 82.6 9.0 43 72-114 24-66 (195)
247 2pwj_A Mitochondrial peroxired 98.9 7.7E-09 2.6E-13 81.2 8.4 76 71-146 42-154 (171)
248 3tjj_A Peroxiredoxin-4; thiore 98.8 8.5E-09 2.9E-13 86.1 8.3 88 72-159 90-218 (254)
249 4hde_A SCO1/SENC family lipopr 98.8 4.6E-08 1.6E-12 76.6 11.5 89 72-160 31-169 (170)
250 3zrd_A Thiol peroxidase; oxido 98.8 2.2E-08 7.6E-13 80.6 9.8 73 72-145 77-183 (200)
251 2c0g_A ERP29 homolog, windbeut 98.8 2.7E-08 9.3E-13 82.4 10.4 97 162-264 16-131 (248)
252 3mng_A Peroxiredoxin-5, mitoch 98.8 2.4E-08 8.2E-13 78.4 8.8 85 72-156 42-170 (173)
253 2qgv_A Hydrogenase-1 operon pr 98.8 7.8E-08 2.7E-12 72.0 10.5 102 158-264 13-124 (140)
254 4euy_A Uncharacterized protein 98.7 1.5E-08 5.2E-13 72.5 6.1 95 165-263 3-103 (105)
255 2hze_A Glutaredoxin-1; thiored 98.7 2.3E-09 7.7E-14 78.3 1.5 73 64-143 10-89 (114)
256 2cq9_A GLRX2 protein, glutared 98.7 1.3E-08 4.3E-13 76.1 5.3 87 63-159 17-113 (130)
257 2dml_A Protein disulfide-isome 98.7 1.6E-07 5.5E-12 69.7 11.3 97 163-263 18-122 (130)
258 1prx_A HORF6; peroxiredoxin, h 98.7 1.9E-07 6.6E-12 76.4 12.5 86 75-160 34-168 (224)
259 3gnj_A Thioredoxin domain prot 98.7 1.9E-07 6.4E-12 67.2 11.0 96 163-263 5-108 (111)
260 2av4_A Thioredoxin-like protei 98.7 1E-07 3.6E-12 72.3 9.6 97 164-263 23-137 (160)
261 3m9j_A Thioredoxin; oxidoreduc 98.7 1.5E-07 5.1E-12 67.0 10.1 95 164-263 2-104 (105)
262 2ht9_A Glutaredoxin-2; thiored 98.7 1.3E-08 4.3E-13 77.6 4.6 86 63-158 39-134 (146)
263 2qsi_A Putative hydrogenase ex 98.7 8.7E-08 3E-12 71.5 8.9 96 164-264 17-122 (137)
264 3qfa_C Thioredoxin; protein-pr 98.7 2.2E-07 7.5E-12 67.7 11.0 97 162-263 11-115 (116)
265 1ep7_A Thioredoxin CH1, H-type 98.7 1.9E-07 6.4E-12 67.4 10.1 97 162-263 2-109 (112)
266 2voc_A Thioredoxin; electron t 98.7 1.5E-07 5.2E-12 68.0 9.4 97 164-266 3-106 (112)
267 2wz9_A Glutaredoxin-3; protein 98.7 1.6E-07 5.4E-12 72.1 10.0 118 161-283 11-143 (153)
268 3uvt_A Thioredoxin domain-cont 98.6 2.1E-07 7.3E-12 66.8 10.0 96 162-263 5-110 (111)
269 2oe3_A Thioredoxin-3; electron 98.6 2.4E-07 8.1E-12 67.4 10.1 96 162-262 12-113 (114)
270 1r26_A Thioredoxin; redox-acti 98.6 2.7E-07 9.2E-12 68.3 10.4 95 164-263 21-121 (125)
271 3f3q_A Thioredoxin-1; His TAG, 98.6 3.3E-07 1.1E-11 66.0 10.5 95 164-263 8-108 (109)
272 1xwb_A Thioredoxin; dimerizati 98.6 3.6E-07 1.2E-11 65.0 10.7 95 164-263 2-105 (106)
273 2i4a_A Thioredoxin; acidophIle 98.6 2.6E-07 8.9E-12 65.9 9.8 96 163-263 3-106 (107)
274 1xcc_A 1-Cys peroxiredoxin; un 98.6 1.5E-07 5.1E-12 76.9 9.5 85 75-159 34-164 (220)
275 3tco_A Thioredoxin (TRXA-1); d 98.6 2.1E-07 7.3E-12 66.6 9.3 97 162-263 4-107 (109)
276 1thx_A Thioredoxin, thioredoxi 98.6 3.4E-07 1.2E-11 66.2 10.5 99 160-263 5-111 (115)
277 1syr_A Thioredoxin; SGPP, stru 98.6 4E-07 1.4E-11 65.7 10.6 97 162-263 8-110 (112)
278 2vim_A Thioredoxin, TRX; thior 98.6 3.9E-07 1.3E-11 64.6 10.3 95 164-263 1-103 (104)
279 2j23_A Thioredoxin; immune pro 98.6 4E-07 1.4E-11 66.8 10.6 97 162-263 15-119 (121)
280 1gh2_A Thioredoxin-like protei 98.6 2.9E-07 1E-11 65.8 9.5 96 163-263 2-105 (107)
281 1t00_A Thioredoxin, TRX; redox 98.6 2.9E-07 1E-11 66.4 9.5 100 160-263 3-109 (112)
282 3ga4_A Dolichyl-diphosphooligo 98.6 1.2E-07 4.2E-12 74.2 7.8 122 155-280 11-168 (178)
283 1oaz_A Thioredoxin 1; immune s 98.6 2.1E-07 7.3E-12 68.6 8.7 97 162-263 3-121 (123)
284 2dj1_A Protein disulfide-isome 98.6 2E-07 6.9E-12 70.2 8.7 101 163-269 18-128 (140)
285 3hz8_A Thiol:disulfide interch 98.6 3.6E-07 1.2E-11 73.0 10.7 42 72-113 23-64 (193)
286 3die_A Thioredoxin, TRX; elect 98.6 3.9E-07 1.3E-11 64.8 9.6 95 163-263 4-105 (106)
287 2v2g_A Peroxiredoxin 6; oxidor 98.6 3.6E-07 1.2E-11 75.2 10.3 88 73-160 29-164 (233)
288 2l6c_A Thioredoxin; oxidoreduc 98.6 4.8E-07 1.6E-11 65.2 9.9 96 166-266 6-107 (110)
289 2ppt_A Thioredoxin-2; thiredox 98.6 4.7E-07 1.6E-11 69.7 10.4 97 162-263 47-150 (155)
290 2trx_A Thioredoxin; electron t 98.6 4.6E-07 1.6E-11 64.8 9.7 95 163-262 3-105 (108)
291 3iv4_A Putative oxidoreductase 98.6 2.4E-07 8.1E-12 66.3 7.9 96 162-260 6-111 (112)
292 3c1r_A Glutaredoxin-1; oxidize 98.6 3.2E-08 1.1E-12 72.6 3.4 71 64-141 16-94 (118)
293 3hz4_A Thioredoxin; NYSGXRC, P 98.6 2.6E-07 9E-12 69.7 8.7 98 161-263 5-110 (140)
294 3d6i_A Monothiol glutaredoxin- 98.6 8.7E-07 3E-11 63.8 11.0 95 164-263 2-107 (112)
295 2i1u_A Thioredoxin, TRX, MPT46 98.6 5.6E-07 1.9E-11 65.8 10.1 99 161-263 11-116 (121)
296 2znm_A Thiol:disulfide interch 98.6 2.1E-07 7.1E-12 74.4 8.3 85 72-160 21-179 (195)
297 3p2a_A Thioredoxin 2, putative 98.6 4.6E-07 1.6E-11 69.0 9.9 97 162-263 38-141 (148)
298 2yzu_A Thioredoxin; redox prot 98.5 4.7E-07 1.6E-11 64.7 9.4 96 164-264 3-105 (109)
299 1mek_A Protein disulfide isome 98.5 4.8E-07 1.6E-11 65.8 9.6 100 163-266 8-118 (120)
300 3apq_A DNAJ homolog subfamily 98.5 3.4E-07 1.2E-11 74.1 9.5 104 163-271 98-208 (210)
301 1x5d_A Protein disulfide-isome 98.5 5.4E-07 1.8E-11 67.0 9.8 97 162-263 7-115 (133)
302 3aps_A DNAJ homolog subfamily 98.5 3.3E-07 1.1E-11 67.2 8.3 97 162-263 3-111 (122)
303 1nsw_A Thioredoxin, TRX; therm 98.5 4.7E-07 1.6E-11 64.3 8.9 94 165-263 3-103 (105)
304 1w4v_A Thioredoxin, mitochondr 98.5 4.9E-07 1.7E-11 66.1 9.2 95 164-262 14-116 (119)
305 2o8v_B Thioredoxin 1; disulfid 98.5 4.3E-07 1.5E-11 67.4 9.0 98 160-262 20-125 (128)
306 1x5e_A Thioredoxin domain cont 98.5 4.7E-07 1.6E-11 66.8 9.2 103 162-272 7-117 (126)
307 3hxs_A Thioredoxin, TRXP; elec 98.5 9.1E-07 3.1E-11 66.6 10.9 98 161-263 21-137 (141)
308 3gv1_A Disulfide interchange p 98.5 1.9E-07 6.3E-12 71.1 7.0 80 72-160 13-138 (147)
309 3ic4_A Glutaredoxin (GRX-1); s 98.5 3.1E-07 1.1E-11 63.9 7.3 69 77-157 14-91 (92)
310 1z6m_A Conserved hypothetical 98.5 7E-07 2.4E-11 70.0 10.2 81 72-157 26-174 (175)
311 1xfl_A Thioredoxin H1; AT3G510 98.5 1.2E-06 4E-11 64.6 10.7 97 162-263 16-122 (124)
312 2yan_A Glutaredoxin-3; oxidore 98.5 4E-07 1.4E-11 65.2 7.3 67 64-140 8-83 (105)
313 1dby_A Chloroplast thioredoxin 98.5 1.4E-06 4.8E-11 62.1 10.1 95 164-263 3-105 (107)
314 2es7_A Q8ZP25_salty, putative 98.5 6E-07 2.1E-11 67.9 8.5 104 163-272 18-132 (142)
315 2e0q_A Thioredoxin; electron t 98.5 8.6E-07 2.9E-11 62.6 8.8 91 169-263 5-101 (104)
316 3gix_A Thioredoxin-like protei 98.4 1.6E-06 5.6E-11 66.1 10.5 96 164-263 5-119 (149)
317 2xc2_A Thioredoxinn; oxidoredu 98.4 1.5E-06 5E-11 63.2 9.8 94 164-263 15-116 (117)
318 1zma_A Bacterocin transport ac 98.4 1.6E-06 5.5E-11 63.1 10.0 95 163-262 13-118 (118)
319 4dvc_A Thiol:disulfide interch 98.4 1.3E-06 4.4E-11 68.9 10.0 87 72-160 20-181 (184)
320 1fb6_A Thioredoxin M; electron 98.4 1.5E-06 5.3E-11 61.5 9.4 93 165-262 3-103 (105)
321 2fwh_A Thiol:disulfide interch 98.4 2.7E-06 9.3E-11 63.5 11.2 100 161-263 10-126 (134)
322 1ti3_A Thioredoxin H, PTTRXH1; 98.4 1.3E-06 4.4E-11 62.9 9.1 97 162-263 4-110 (113)
323 3evi_A Phosducin-like protein 98.4 1E-06 3.4E-11 64.4 8.3 97 163-264 4-113 (118)
324 2vm1_A Thioredoxin, thioredoxi 98.4 2.4E-06 8.2E-11 62.0 10.1 98 161-263 5-112 (118)
325 2klx_A Glutaredoxin; thioredox 98.4 4.7E-07 1.6E-11 62.6 5.9 56 76-139 7-65 (89)
326 2l5l_A Thioredoxin; structural 98.4 2.3E-06 8E-11 64.0 10.3 96 163-263 10-124 (136)
327 2vlu_A Thioredoxin, thioredoxi 98.4 2.5E-06 8.7E-11 62.4 10.2 97 162-263 12-118 (122)
328 3feu_A Putative lipoprotein; a 98.4 7E-07 2.4E-11 70.8 7.5 84 73-160 22-183 (185)
329 3ul3_B Thioredoxin, thioredoxi 98.4 5.3E-07 1.8E-11 66.9 6.4 88 172-263 34-128 (128)
330 1un2_A DSBA, thiol-disulfide i 98.4 1.1E-07 3.6E-12 76.4 2.7 45 72-116 112-159 (197)
331 2lqo_A Putative glutaredoxin R 98.4 1.5E-06 5E-11 60.4 8.2 75 76-161 5-84 (92)
332 3keb_A Probable thiol peroxida 98.4 2.3E-06 8E-11 69.5 10.6 86 72-161 47-176 (224)
333 2djk_A PDI, protein disulfide- 98.4 4.1E-06 1.4E-10 62.5 11.2 97 163-262 7-112 (133)
334 3l9v_A Putative thiol-disulfid 98.4 7.6E-07 2.6E-11 70.9 7.5 41 73-113 14-57 (189)
335 2rem_A Disulfide oxidoreductas 98.4 2.6E-06 8.7E-11 67.8 10.5 42 72-113 24-65 (193)
336 3bj5_A Protein disulfide-isome 98.4 9.5E-06 3.2E-10 61.6 13.0 109 56-164 14-130 (147)
337 1fov_A Glutaredoxin 3, GRX3; a 98.4 2E-06 6.9E-11 58.2 8.1 67 77-157 3-73 (82)
338 1hyu_A AHPF, alkyl hydroperoxi 98.3 2.6E-05 9E-10 71.9 18.0 179 65-263 9-198 (521)
339 3qmx_A Glutaredoxin A, glutare 98.3 1.4E-06 4.6E-11 61.6 7.0 60 73-140 14-78 (99)
340 3nzn_A Glutaredoxin; structura 98.3 2.6E-06 9E-11 60.6 8.4 73 73-156 20-101 (103)
341 2f51_A Thioredoxin; electron t 98.3 3.1E-06 1.1E-10 61.7 8.9 101 162-266 3-114 (118)
342 4f82_A Thioredoxin reductase; 98.3 3.4E-06 1.2E-10 65.9 9.3 82 65-146 40-158 (176)
343 3rhb_A ATGRXC5, glutaredoxin-C 98.3 1E-06 3.4E-11 63.9 5.9 68 64-141 10-85 (113)
344 1v98_A Thioredoxin; oxidoreduc 98.3 3.6E-06 1.2E-10 63.3 9.2 95 164-263 35-136 (140)
345 2l57_A Uncharacterized protein 98.3 2.9E-06 1E-10 62.5 8.5 87 176-265 22-117 (126)
346 3d22_A TRXH4, thioredoxin H-ty 98.3 3.6E-06 1.2E-10 63.1 9.2 98 161-263 23-130 (139)
347 3msz_A Glutaredoxin 1; alpha-b 98.3 1.8E-06 6.1E-11 59.4 6.4 74 76-161 5-87 (89)
348 3qou_A Protein YBBN; thioredox 98.3 4.7E-06 1.6E-10 70.7 10.2 98 162-264 7-113 (287)
349 2dj0_A Thioredoxin-related tra 98.3 8.7E-07 3E-11 66.5 4.9 96 163-263 8-119 (137)
350 3dxb_A Thioredoxin N-terminall 98.3 4.2E-06 1.4E-10 68.3 9.3 96 164-264 14-117 (222)
351 2ec4_A FAS-associated factor 1 98.2 1.2E-05 4.2E-10 63.0 11.4 90 71-160 53-167 (178)
352 2khp_A Glutaredoxin; thioredox 98.2 2.2E-06 7.7E-11 59.5 6.3 57 76-140 7-67 (92)
353 1qgv_A Spliceosomal protein U5 98.2 6.3E-06 2.2E-10 62.2 9.3 96 164-262 5-118 (142)
354 2djj_A PDI, protein disulfide- 98.2 2.8E-06 9.7E-11 62.0 7.1 97 162-264 7-116 (121)
355 3cxg_A Putative thioredoxin; m 98.2 6.8E-06 2.3E-10 61.3 8.7 97 163-263 21-127 (133)
356 3sbc_A Peroxiredoxin TSA1; alp 98.2 2.3E-05 7.9E-10 63.2 11.9 88 72-159 51-179 (216)
357 3emx_A Thioredoxin; structural 98.2 6.4E-06 2.2E-10 61.6 7.8 97 162-266 16-127 (135)
358 2dbc_A PDCL2, unnamed protein 98.1 9.4E-06 3.2E-10 60.7 8.4 98 162-264 10-120 (135)
359 2trc_P Phosducin, MEKA, PP33; 98.1 7.7E-06 2.6E-10 66.5 8.4 98 163-264 100-212 (217)
360 2dj3_A Protein disulfide-isome 98.1 2.4E-06 8.1E-11 63.6 5.0 101 162-266 7-119 (133)
361 2pu9_C TRX-F, thioredoxin F-ty 98.1 2.1E-05 7E-10 56.4 9.6 95 162-262 5-108 (111)
362 3l9s_A Thiol:disulfide interch 98.1 6E-06 2.1E-10 65.7 7.3 40 73-112 21-63 (191)
363 1wmj_A Thioredoxin H-type; str 98.1 3.3E-06 1.1E-10 62.4 5.2 98 162-264 14-121 (130)
364 3q6o_A Sulfhydryl oxidase 1; p 98.1 2E-05 6.8E-10 65.2 10.3 116 162-282 12-154 (244)
365 3h8q_A Thioredoxin reductase 3 98.1 5.7E-06 1.9E-10 60.0 6.0 67 64-140 8-81 (114)
366 1faa_A Thioredoxin F; electron 98.1 2.8E-05 9.5E-10 56.9 9.4 97 161-263 17-122 (124)
367 3ctg_A Glutaredoxin-2; reduced 98.0 2.6E-06 8.8E-11 63.3 3.3 71 63-140 27-105 (129)
368 1wik_A Thioredoxin-like protei 98.0 1.6E-05 5.5E-10 57.1 7.1 68 63-140 5-81 (109)
369 2yj7_A LPBCA thioredoxin; oxid 97.3 7.5E-07 2.6E-11 63.1 0.0 95 165-263 4-105 (106)
370 4eo3_A Bacterioferritin comigr 98.0 2.8E-05 9.6E-10 67.0 9.6 86 72-160 23-138 (322)
371 3t58_A Sulfhydryl oxidase 1; o 98.0 2.8E-05 9.7E-10 71.4 10.2 118 162-283 12-155 (519)
372 2kuc_A Putative disulphide-iso 98.0 1.7E-05 5.9E-10 58.5 7.2 85 178-265 25-121 (130)
373 1a0r_P Phosducin, MEKA, PP33; 97.9 5.3E-05 1.8E-09 62.5 9.9 99 163-265 113-226 (245)
374 3fk8_A Disulphide isomerase; A 97.9 4.4E-05 1.5E-09 56.6 8.5 82 178-262 27-130 (133)
375 1wou_A Thioredoxin -related pr 97.9 5.5E-05 1.9E-09 55.4 8.8 93 165-262 7-122 (123)
376 3gha_A Disulfide bond formatio 97.8 0.00015 5.1E-09 58.1 10.7 86 72-162 28-193 (202)
377 3tue_A Tryparedoxin peroxidase 97.8 0.00022 7.7E-09 57.5 10.9 88 72-159 55-183 (219)
378 3kp8_A Vkorc1/thioredoxin doma 97.8 3.3E-05 1.1E-09 55.1 5.4 72 181-261 13-91 (106)
379 1fo5_A Thioredoxin; disulfide 97.8 0.0001 3.4E-09 49.7 7.6 74 182-263 4-84 (85)
380 1nho_A Probable thioredoxin; b 97.7 0.00013 4.3E-09 49.2 6.8 73 183-263 4-83 (85)
381 1ilo_A Conserved hypothetical 97.7 0.00034 1.1E-08 46.1 8.7 69 184-260 3-76 (77)
382 2h30_A Thioredoxin, peptide me 97.6 0.00015 5.1E-09 55.6 7.7 83 179-264 37-155 (164)
383 3qcp_A QSOX from trypanosoma b 97.6 2E-05 7E-10 70.8 2.8 97 163-264 24-138 (470)
384 3dml_A Putative uncharacterize 97.6 0.00012 4E-09 52.9 5.8 79 180-262 18-107 (116)
385 3f4s_A Alpha-DSBA1, putative u 97.6 0.00068 2.3E-08 55.2 10.8 91 72-162 38-212 (226)
386 3f9u_A Putative exported cytoc 97.5 0.00026 8.9E-09 54.9 7.5 84 176-262 43-163 (172)
387 3l4n_A Monothiol glutaredoxin- 97.5 0.00012 4.3E-09 53.8 4.9 68 64-138 5-79 (127)
388 2ju5_A Thioredoxin disulfide i 97.5 0.00038 1.3E-08 53.0 7.5 81 178-262 45-149 (154)
389 1lu4_A Soluble secreted antige 97.4 0.00077 2.6E-08 49.5 8.5 79 180-263 24-134 (136)
390 2lst_A Thioredoxin; structural 96.5 2.4E-05 8.2E-10 57.8 0.0 90 171-263 10-114 (130)
391 2b5x_A YKUV protein, TRXY; thi 97.3 0.00075 2.6E-08 50.4 8.0 81 179-262 28-142 (148)
392 3raz_A Thioredoxin-related pro 97.3 0.0013 4.4E-08 49.6 9.2 81 179-262 23-137 (151)
393 1zzo_A RV1677; thioredoxin fol 97.3 0.0011 3.8E-08 48.5 8.3 79 180-263 25-133 (136)
394 4evm_A Thioredoxin family prot 97.3 0.0017 5.7E-08 47.6 9.1 80 180-262 22-136 (138)
395 1sen_A Thioredoxin-like protei 97.3 0.00092 3.1E-08 51.5 7.8 91 171-262 37-145 (164)
396 3erw_A Sporulation thiol-disul 97.2 0.0013 4.3E-08 48.9 8.1 80 179-261 33-145 (145)
397 2l5o_A Putative thioredoxin; s 97.2 0.0012 4E-08 49.7 7.9 81 179-262 27-138 (153)
398 2wci_A Glutaredoxin-4; redox-a 97.2 0.00042 1.4E-08 51.5 4.8 68 64-140 26-101 (135)
399 1xiy_A Peroxiredoxin, pfaop; a 97.1 0.0039 1.3E-07 48.8 10.2 86 72-157 42-178 (182)
400 1kng_A Thiol:disulfide interch 97.1 0.0018 6.1E-08 48.8 7.7 80 180-262 42-149 (156)
401 3ia1_A THIO-disulfide isomeras 97.1 0.0021 7.1E-08 48.5 8.0 80 181-265 31-144 (154)
402 3bj5_A Protein disulfide-isome 97.1 0.0073 2.5E-07 45.5 10.9 105 157-263 9-125 (147)
403 3bci_A Disulfide bond protein 97.1 0.0057 1.9E-07 47.9 10.6 39 72-110 10-51 (186)
404 2f9s_A Thiol-disulfide oxidore 97.0 0.0015 5.1E-08 49.1 6.8 81 180-263 26-136 (151)
405 1ttz_A Conserved hypothetical 97.0 0.0026 8.9E-08 43.3 7.2 71 184-263 3-75 (87)
406 3ph9_A Anterior gradient prote 97.0 0.0014 4.7E-08 49.8 6.1 76 172-250 36-120 (151)
407 3ira_A Conserved protein; meth 96.9 0.0034 1.2E-07 48.7 8.2 85 154-241 12-115 (173)
408 3gmf_A Protein-disulfide isome 96.9 0.011 3.6E-07 47.3 11.2 36 121-161 162-197 (205)
409 1aba_A Glutaredoxin; electron 96.9 0.0028 9.6E-08 43.0 6.5 55 77-138 2-74 (87)
410 2lja_A Putative thiol-disulfid 96.9 0.0083 2.8E-07 44.9 9.8 80 180-262 30-140 (152)
411 2axo_A Hypothetical protein AT 96.9 0.0013 4.4E-08 54.6 5.3 80 74-160 43-142 (270)
412 1t1v_A SH3BGRL3, SH3 domain-bi 96.8 0.0041 1.4E-07 42.8 7.1 55 77-139 4-70 (93)
413 3ipz_A Monothiol glutaredoxin- 96.7 0.0036 1.2E-07 44.5 6.4 65 65-139 10-83 (109)
414 3or5_A Thiol:disulfide interch 96.7 0.0098 3.3E-07 45.1 9.4 82 179-263 33-149 (165)
415 3eyt_A Uncharacterized protein 96.7 0.0075 2.6E-07 45.5 8.7 80 180-262 28-149 (158)
416 3gx8_A Monothiol glutaredoxin- 96.7 0.0041 1.4E-07 45.2 6.7 66 65-139 8-84 (121)
417 3zyw_A Glutaredoxin-3; metal b 96.7 0.0027 9.1E-08 45.4 5.3 64 65-138 8-80 (111)
418 2b1k_A Thiol:disulfide interch 96.7 0.0036 1.2E-07 47.9 6.6 81 179-262 50-157 (168)
419 3lor_A Thiol-disulfide isomera 96.7 0.0088 3E-07 45.2 8.7 80 180-262 30-152 (160)
420 3kh7_A Thiol:disulfide interch 96.7 0.0038 1.3E-07 48.5 6.6 80 180-262 58-164 (176)
421 3gl3_A Putative thiol:disulfid 96.6 0.009 3.1E-07 44.7 8.2 82 180-264 28-141 (152)
422 2ct6_A SH3 domain-binding glut 96.6 0.0054 1.8E-07 43.8 6.5 57 76-140 9-83 (111)
423 3kp9_A Vkorc1/thioredoxin doma 96.6 0.0053 1.8E-07 51.7 7.1 82 170-262 189-277 (291)
424 1nm3_A Protein HI0572; hybrid, 96.5 0.0053 1.8E-07 50.3 7.0 58 74-139 169-229 (241)
425 2fgx_A Putative thioredoxin; N 96.4 0.0087 3E-07 42.3 6.4 71 182-260 30-106 (107)
426 3ha9_A Uncharacterized thiored 96.4 0.02 6.9E-07 43.5 9.1 79 179-263 36-162 (165)
427 3hdc_A Thioredoxin family prot 96.4 0.018 6.2E-07 43.5 8.6 84 180-266 41-153 (158)
428 1z6n_A Hypothetical protein PA 96.3 0.015 5.1E-07 44.8 7.9 78 180-262 54-140 (167)
429 3kcm_A Thioredoxin family prot 96.3 0.015 5.1E-07 43.5 7.9 82 179-263 27-141 (154)
430 3hcz_A Possible thiol-disulfid 96.3 0.016 5.5E-07 42.9 8.0 80 179-261 30-142 (148)
431 3kzq_A Putative uncharacterize 96.3 0.062 2.1E-06 42.7 11.6 42 119-160 161-202 (208)
432 2dlx_A UBX domain-containing p 96.2 0.029 9.9E-07 42.5 9.0 86 173-262 35-133 (153)
433 3fkf_A Thiol-disulfide oxidore 96.2 0.025 8.7E-07 41.8 8.7 78 179-262 32-143 (148)
434 2wem_A Glutaredoxin-related pr 96.2 0.0096 3.3E-07 43.0 5.7 67 64-140 11-87 (118)
435 3c7m_A Thiol:disulfide interch 96.0 0.011 3.9E-07 46.3 6.1 42 73-114 17-59 (195)
436 3lwa_A Secreted thiol-disulfid 95.9 0.027 9.4E-07 43.6 7.7 80 180-262 59-178 (183)
437 2lrn_A Thiol:disulfide interch 95.9 0.039 1.3E-06 41.2 8.3 76 180-261 29-137 (152)
438 2hyx_A Protein DIPZ; thioredox 95.7 0.019 6.5E-07 49.9 6.5 80 180-262 82-196 (352)
439 1t4y_A Adaptive-response senso 95.7 0.24 8E-06 34.3 10.5 83 76-159 13-97 (105)
440 2e7p_A Glutaredoxin; thioredox 95.7 0.014 4.7E-07 41.6 4.8 85 172-264 12-107 (116)
441 2rli_A SCO2 protein homolog, m 95.5 0.056 1.9E-06 41.1 8.1 80 180-262 26-161 (171)
442 2in3_A Hypothetical protein; D 95.3 0.031 1E-06 44.7 6.2 45 116-160 165-209 (216)
443 2ywi_A Hypothetical conserved 95.3 0.027 9.1E-07 44.1 5.5 44 216-262 119-171 (196)
444 3fw2_A Thiol-disulfide oxidore 95.1 0.2 6.9E-06 37.1 9.9 77 180-262 33-145 (150)
445 2xhf_A Peroxiredoxin 5; oxidor 95.0 0.082 2.8E-06 40.7 7.5 75 72-146 41-152 (171)
446 1wjk_A C330018D20RIK protein; 95.0 0.19 6.4E-06 34.8 8.8 76 180-264 15-95 (100)
447 3ewl_A Uncharacterized conserv 95.0 0.11 3.6E-06 38.1 8.0 79 180-264 27-140 (142)
448 2ggt_A SCO1 protein homolog, m 94.9 0.06 2E-06 40.6 6.5 80 180-262 23-158 (164)
449 2lrt_A Uncharacterized protein 94.9 0.085 2.9E-06 39.5 7.2 75 180-257 35-140 (152)
450 2cvb_A Probable thiol-disulfid 94.8 0.078 2.7E-06 41.1 6.9 80 180-262 33-156 (188)
451 3eur_A Uncharacterized protein 94.7 0.1 3.6E-06 38.3 7.1 77 180-262 31-142 (142)
452 1jfu_A Thiol:disulfide interch 94.1 0.28 9.6E-06 37.8 8.7 83 180-262 60-177 (186)
453 1u6t_A SH3 domain-binding glut 94.0 0.24 8.1E-06 35.7 7.3 62 76-140 1-75 (121)
454 2jad_A Yellow fluorescent prot 94.0 0.041 1.4E-06 47.6 3.8 69 66-139 254-328 (362)
455 2wul_A Glutaredoxin related pr 93.9 0.095 3.3E-06 37.6 5.1 67 63-139 10-86 (118)
456 2k6v_A Putative cytochrome C o 93.7 0.15 5E-06 38.7 6.4 82 180-262 35-170 (172)
457 3gn3_A Putative protein-disulf 93.7 0.097 3.3E-06 40.8 5.4 42 72-113 13-55 (182)
458 3tdg_A DSBG, putative uncharac 93.1 0.075 2.6E-06 44.1 3.9 28 73-100 147-174 (273)
459 1un2_A DSBA, thiol-disulfide i 93.0 0.13 4.4E-06 40.6 5.0 81 116-199 39-132 (197)
460 2kok_A Arsenate reductase; bru 92.9 0.46 1.6E-05 34.0 7.5 43 77-125 7-56 (120)
461 4fo5_A Thioredoxin-like protei 92.8 0.34 1.2E-05 35.4 7.0 77 180-262 32-142 (143)
462 2bmx_A Alkyl hydroperoxidase C 92.7 0.38 1.3E-05 37.5 7.5 82 180-264 45-169 (195)
463 3s9f_A Tryparedoxin; thioredox 92.7 0.49 1.7E-05 35.8 7.8 58 180-240 48-138 (165)
464 1o8x_A Tryparedoxin, TRYX, TXN 92.4 0.52 1.8E-05 34.5 7.5 59 180-241 28-120 (146)
465 1i5g_A Tryparedoxin II; electr 92.3 0.53 1.8E-05 34.4 7.5 59 180-241 28-120 (144)
466 1o73_A Tryparedoxin; electron 92.3 0.53 1.8E-05 34.3 7.4 59 180-241 28-120 (144)
467 2x8g_A Thioredoxin glutathione 91.7 0.2 7E-06 46.6 5.5 68 64-141 9-83 (598)
468 3u5r_E Uncharacterized protein 91.6 0.59 2E-05 37.2 7.4 76 182-262 61-184 (218)
469 3ktb_A Arsenical resistance op 91.4 0.54 1.8E-05 32.8 6.0 62 92-156 26-101 (106)
470 2vup_A Glutathione peroxidase- 91.1 0.88 3E-05 35.2 7.9 30 233-262 153-182 (190)
471 1zof_A Alkyl hydroperoxide-red 91.1 0.21 7.2E-06 39.1 4.2 44 216-262 106-158 (198)
472 1we0_A Alkyl hydroperoxide red 91.0 0.31 1.1E-05 37.7 5.1 47 216-262 101-154 (187)
473 1t3b_A Thiol:disulfide interch 90.9 0.37 1.3E-05 38.3 5.6 40 217-264 171-210 (211)
474 1xvw_A Hypothetical protein RV 90.6 0.97 3.3E-05 33.6 7.5 81 182-262 38-157 (160)
475 3cmi_A Peroxiredoxin HYR1; thi 90.4 0.61 2.1E-05 35.3 6.2 30 233-262 136-165 (171)
476 2p5q_A Glutathione peroxidase 90.3 0.8 2.8E-05 34.3 6.9 32 231-262 131-165 (170)
477 2k8s_A Thioredoxin; dimer, str 90.1 0.24 8.2E-06 32.4 3.2 50 184-236 4-61 (80)
478 3kgk_A Arsenical resistance op 89.5 2.6 8.8E-05 29.5 8.1 63 92-157 23-99 (110)
479 3gn3_A Putative protein-disulf 89.5 0.26 8.9E-06 38.3 3.4 37 118-156 145-181 (182)
480 2v1m_A Glutathione peroxidase; 88.4 1.6 5.5E-05 32.5 7.3 32 231-262 133-164 (169)
481 3c7m_A Thiol:disulfide interch 87.7 0.26 9E-06 38.3 2.4 43 116-160 151-193 (195)
482 1eej_A Thiol:disulfide interch 87.7 0.69 2.4E-05 36.8 4.9 39 217-263 171-209 (216)
483 2ls5_A Uncharacterized protein 87.5 0.11 3.6E-06 39.0 0.0 32 230-262 114-145 (159)
484 1z3e_A Regulatory protein SPX; 87.4 0.6 2E-05 34.1 4.0 34 77-116 3-36 (132)
485 3drn_A Peroxiredoxin, bacterio 87.0 1.8 6.2E-05 32.2 6.7 47 215-261 94-145 (161)
486 3ic4_A Glutaredoxin (GRX-1); s 86.5 2.3 8E-05 28.2 6.5 68 184-261 14-91 (92)
487 2obi_A PHGPX, GPX-4, phospholi 86.5 1.7 5.8E-05 33.2 6.5 32 231-262 150-181 (183)
488 2h01_A 2-Cys peroxiredoxin; th 86.3 2.4 8.3E-05 32.6 7.4 44 216-262 104-156 (192)
489 3fys_A Protein DEGV; fatty aci 86.2 0.82 2.8E-05 38.8 4.7 157 113-284 45-206 (315)
490 2i81_A 2-Cys peroxiredoxin; st 86.0 2.2 7.7E-05 33.7 7.1 45 215-262 124-177 (213)
491 1zye_A Thioredoxin-dependent p 86.0 2.4 8.3E-05 33.6 7.3 44 216-262 129-182 (220)
492 1v58_A Thiol:disulfide interch 85.8 1.8 6E-05 35.1 6.5 43 218-264 190-232 (241)
493 1qmv_A Human thioredoxin perox 85.8 2.1 7.2E-05 33.2 6.8 48 216-263 107-161 (197)
494 2lus_A Thioredoxion; CR-Trp16, 85.9 0.15 5.2E-06 37.2 0.0 22 217-241 98-119 (143)
495 1r7h_A NRDH-redoxin; thioredox 85.7 4 0.00014 25.5 7.1 68 184-261 3-74 (75)
496 2b7k_A SCO1 protein; metalloch 85.5 2.2 7.4E-05 33.3 6.7 45 218-262 119-176 (200)
497 1kte_A Thioltransferase; redox 85.3 2.9 9.9E-05 28.5 6.6 60 171-235 3-73 (105)
498 3dwv_A Glutathione peroxidase- 85.0 5.4 0.00019 30.5 8.8 31 233-263 151-181 (187)
499 1h75_A Glutaredoxin-like prote 84.3 2.5 8.4E-05 27.2 5.6 70 184-263 3-76 (81)
500 2g2q_A Glutaredoxin-2; thiored 84.2 0.77 2.6E-05 32.3 3.0 36 74-113 2-37 (124)
No 1
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=1.2e-38 Score=283.16 Aligned_cols=225 Identities=15% Similarity=0.223 Sum_probs=207.7
Q ss_pred CCCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhH------HHHHHHHHHhhC-CcEEEEEeCcccHHHHHhCCCcc
Q 021976 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLA------PEFAAAAKMLKG-EADLVMVDAYLEKDLAKEYNILA 127 (304)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~------~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~ 127 (304)
.+.|+.++.++|++.++++++++|+||||||+||+... |.|+++++.+++ ++.+++|||++++++|++|||++
T Consensus 12 ~~~v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~~ 91 (367)
T 3us3_A 12 VDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTE 91 (367)
T ss_dssp CCCCEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCCS
T ss_pred CCccEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCCc
Confidence 45799999999999998899999999999999974433 799999999987 69999999999999999999999
Q ss_pred ccEEEEEeCCeEEEEeeCCCCHHHHHHHHHHHhCCCceecCCHHHHHHhhc-cCCeEEEEEecCCCCccHHHHHHHh-cc
Q 021976 128 YPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILT-VESKLVLGFLHDLEGMESEELAAAS-KL 205 (304)
Q Consensus 128 ~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~a-~~ 205 (304)
+||+++|++|+. ..|.|.++.+.|.+|+.+++++++..+++.++++++++ +++.++|+||.+++++..+.|..+| .+
T Consensus 92 ~PTl~~f~~G~~-~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~f~~~A~~~ 170 (367)
T 3us3_A 92 EDSIYVFKEDEV-IEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKNKDSEHYKAFKEAAEEF 170 (367)
T ss_dssp TTEEEEEETTEE-EECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTCHHHHHHHHHHHHH
T ss_pred CceEEEEECCcE-EEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECCCCchHHHHHHHHHHhh
Confidence 999999999955 69999999999999999999999999999999999998 6788999999999999999999988 68
Q ss_pred CCceeEEEecCHHHHhhcCCCCCCCCCeEEEEecCCCceecccCC-CCHHHHHHHHhcCCCCcEEeeCccchhhhhcCCC
Q 021976 206 HSDVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQ-FTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPR 284 (304)
Q Consensus 206 ~~~~~f~~~~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~-~~~~~i~~fi~~~~~p~~~~l~~~~~~~~~~~~~ 284 (304)
++++.|+.+.+++++++|+++ .|++++|++.++.+..|+|. ++.++|.+||..+++|++++++.+++..++.+..
T Consensus 171 ~~~~~F~~~~~~~~~~~~~v~----~p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~~ 246 (367)
T 3us3_A 171 HPYIPFFATFDSKVAKKLTLK----LNEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKPESMYETWEDDM 246 (367)
T ss_dssp TTTSCEEEECCHHHHHHHTCC----TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTCSCSEEECCGGGHHHHHHSCB
T ss_pred cCCcEEEEECCHHHHHHcCCC----CCeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCccceeecChhhHHHHHhhcc
Confidence 889999999999999999998 49999999977789999995 8999999999999999999999999999987654
No 2
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=100.00 E-value=1.8e-38 Score=280.73 Aligned_cols=224 Identities=20% Similarity=0.273 Sum_probs=209.7
Q ss_pred CCCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHH-------HHHHHHHhhC-CcEEEEEeCcccHHHHHhCCCc
Q 021976 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPE-------FAAAAKMLKG-EADLVMVDAYLEKDLAKEYNIL 126 (304)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~-------~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~ 126 (304)
++.|..+++++|++.+.++++++|+||||||+ |+++.|. |+++++.+++ ++.+++|||++++++|++|||+
T Consensus 10 ~~~v~~l~~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~ 88 (350)
T 1sji_A 10 KDRVVSLTEKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFD 88 (350)
T ss_dssp CCCCEEECHHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCC
T ss_pred CCccEECCHHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCC
Confidence 35799999999999998899999999999999 9999998 9999999987 6999999999999999999999
Q ss_pred cccEEEEEeCCeEEEEeeCCCCHHHHHHHHHHHhCCCceecCCHHHHHHhhc-cCCeEEEEEecCCCCccHHHHHHHh-c
Q 021976 127 AYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILT-VESKLVLGFLHDLEGMESEELAAAS-K 204 (304)
Q Consensus 127 ~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~a-~ 204 (304)
++||+++|++|+ +.+|.|.++.+.|.+|+.+.+++++..+++.++++++++ +++.++|+||.+++++..+.|..+| .
T Consensus 89 ~~Pt~~~~~~g~-~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~~~~~A~~ 167 (350)
T 1sji_A 89 EEGSLYVLKGDR-TIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGFFKSEESEYYKAFEEAAEH 167 (350)
T ss_dssp STTEEEEEETTE-EEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTSHHHHHHHHHHHH
T ss_pred ccceEEEEECCc-EEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEEECCCCcHHHHHHHHHHHh
Confidence 999999999996 779999999999999999999999999999999999998 7788999999999999999999988 6
Q ss_pred cCCceeEEEecCHHHHhhcCCCCCCCCCeEEEEecCCCceecccCC-CCHHHHHHHHhcCCCCcEEeeCccchhhhhcCC
Q 021976 205 LHSDVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQ-FTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDP 283 (304)
Q Consensus 205 ~~~~~~f~~~~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~-~~~~~i~~fi~~~~~p~~~~l~~~~~~~~~~~~ 283 (304)
+++++.|+.+.+++++++++++ +|++++|++.++.+..|+|. ++.++|.+||.+++.|++++++.+++..++++.
T Consensus 168 ~~~~~~f~~~~~~~~~~~~~v~----~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~ 243 (350)
T 1sji_A 168 FQPYIKFFATFDKGVAKKLSLK----MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRPTLRRLRPEDMFETWEDD 243 (350)
T ss_dssp TTTTSEEEEECCHHHHHHHTCC----TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCCCSEEECCTTTHHHHHHSC
T ss_pred hccCcEEEEECCHHHHHHcCCC----CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCccchhhcChhhHHHHhcCC
Confidence 7799999999999999999997 79999999877788999997 899999999999999999999999999999876
Q ss_pred C
Q 021976 284 R 284 (304)
Q Consensus 284 ~ 284 (304)
.
T Consensus 244 ~ 244 (350)
T 1sji_A 244 L 244 (350)
T ss_dssp S
T ss_pred C
Confidence 5
No 3
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=100.00 E-value=1.4e-36 Score=279.75 Aligned_cols=223 Identities=24% Similarity=0.411 Sum_probs=208.9
Q ss_pred CcEEcChhcHHHHhcCC---CcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEE
Q 021976 57 DVVSLNGKNFSEFMGKN---RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (304)
Q Consensus 57 ~v~~l~~~~~~~~~~~~---~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (304)
.|..+++++|++.+.++ ++++|+|||+||++|+++.|.|+++++.+++.+.++.|||++++++|++|||+++||+++
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~ 81 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKI 81 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCEESEEEE
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCCCCEEEE
Confidence 57899999999999777 999999999999999999999999999999889999999999999999999999999999
Q ss_pred EeCCeEEEEeeCCCCHHHHHHHHHHHhCCCceecCCHHHHHHhhccCCeEEEEEecCCCCccHHHHHHHh-ccCCceeEE
Q 021976 134 FVAGVRQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEELAAAS-KLHSDVNFY 212 (304)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~a-~~~~~~~f~ 212 (304)
|++|+.+.+|.|.++.+.|.+|+.+.+++++..+.+.++++++++.++.++|+||.++++...+.|..+| .+++++.|+
T Consensus 82 ~~~g~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~f~~~a~~~~~~~~F~ 161 (481)
T 3f8u_A 82 FRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFA 161 (481)
T ss_dssp EETTEEEEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTTSSSCEEEEEESCTTCHHHHHHHHHHHHHTTTSCEE
T ss_pred EeCCceeeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHHhcCCcEEEEEECCCccchHHHHHHHHHHhccCceEE
Confidence 9999889999999999999999999999999999999999999999999999999998999999999988 688999999
Q ss_pred EecCHHHHhhcCCCCCCCCCeEEEEe------cCCCceeccc-CCCCHHHHHHHHhcCCCCcEEeeCccchhhhhcCC
Q 021976 213 QTTSADVAEFFHIHPKSKRPALIFLH------LEAGKATPFR-HQFTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDP 283 (304)
Q Consensus 213 ~~~~~~l~~~~~i~~~~~~P~lv~~~------~~~~~~~~y~-g~~~~~~i~~fi~~~~~p~~~~l~~~~~~~~~~~~ 283 (304)
.+.+++++++|+++. +.+++|+ ..++.+..|+ |..+.++|.+||..+++|++++++.+|+..++...
T Consensus 162 ~~~~~~~~~~~~v~~----~~i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~~n~~~~~~~~ 235 (481)
T 3f8u_A 162 HTNVESLVNEYDDNG----EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGKD 235 (481)
T ss_dssp EECCHHHHHHHCSSS----EEEEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTTSCEECTTTHHHHTTSS
T ss_pred EECCHHHHHHhCCCC----CcEEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCCccccChhHHHHhcCCC
Confidence 999999999999985 5588898 4456789999 78999999999999999999999999999998544
No 4
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=272.07 Aligned_cols=223 Identities=22% Similarity=0.382 Sum_probs=182.3
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhh------CCcEEEEEeCcccHHHHHhCCCcccc
Q 021976 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK------GEADLVMVDAYLEKDLAKEYNILAYP 129 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~------~~~~~~~vd~~~~~~~~~~~~v~~~P 129 (304)
+.|+.+++++|++++.++++++|+|||+||++|+++.|.|+++++.++ +++.++.|||++++++|++|||+++|
T Consensus 5 ~~v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~P 84 (382)
T 2r2j_A 5 SEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYP 84 (382)
T ss_dssp ---CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEES
T ss_pred CceEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcCC
Confidence 468899999999999889999999999999999999999999999984 35999999999999999999999999
Q ss_pred EEEEEeCCeEEE-EeeCCCCHHHHHHHHHHHhCCCceecCCHHHHHHhhccCCeEEEEEecCCCCccHHHHHHHh-ccCC
Q 021976 130 TLYLFVAGVRQF-QFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEELAAAS-KLHS 207 (304)
Q Consensus 130 t~~~~~~g~~~~-~~~g~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~a-~~~~ 207 (304)
|+++|++|+.+. .|.|.++.+.|.+|+.+.+++++..+++.++++. +..++.++|+||.+++++.++.|..+| .+++
T Consensus 85 t~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~~~~~f~~~A~~~~~ 163 (382)
T 2r2j_A 85 TLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSKRNIIGYFEQKDSDNYRVFERVANILHD 163 (382)
T ss_dssp EEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC-------------CCEEEEEESCSSSHHHHHHHHHHHHHTT
T ss_pred EEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCCCEEEEEECCCCChhHHHHHHHHHHhhc
Confidence 999999997766 5999999999999999999999999988888888 677788999999998899888999888 6889
Q ss_pred ceeEEEecCHHHHhhcCCCCCCCCCeEEEEecC--CCceecccCCC-CHHHHHHHHhcCCCCcEEeeCccchhhhhcCCC
Q 021976 208 DVNFYQTTSADVAEFFHIHPKSKRPALIFLHLE--AGKATPFRHQF-TRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPR 284 (304)
Q Consensus 208 ~~~f~~~~~~~l~~~~~i~~~~~~P~lv~~~~~--~~~~~~y~g~~-~~~~i~~fi~~~~~p~~~~l~~~~~~~~~~~~~ 284 (304)
++.|+.+.+ ++.+.++++. .| + +|++. +.....|+|.+ +.++|.+||..++.|++++++.+++.+++.++.
T Consensus 164 ~~~F~~~~~-~~~~~~~v~~---~p-i-~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~~ 237 (382)
T 2r2j_A 164 DCAFLSAFG-DVSKPERYSG---DN-I-IYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLVREITFENGEELTEEGL 237 (382)
T ss_dssp TCEEEEEES-CC-----------CE-E-EEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSCSSEECCHHHHHHHHTTCC
T ss_pred cceEEEEeh-hhHHhhCCCC---Cc-e-EECCCCCCCcCcccCCCCCCHHHHHHHHHhcccCceEecChhhHHHHhcCCC
Confidence 999998877 7888999985 78 4 45554 34678899998 899999999999999999999999999998887
Q ss_pred C
Q 021976 285 K 285 (304)
Q Consensus 285 ~ 285 (304)
+
T Consensus 238 ~ 238 (382)
T 2r2j_A 238 P 238 (382)
T ss_dssp C
T ss_pred c
Confidence 7
No 5
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-34 Score=248.56 Aligned_cols=228 Identities=19% Similarity=0.312 Sum_probs=194.1
Q ss_pred ccCCCcEEcChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCc--ccHHHHHhCCCcccc
Q 021976 53 LYAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY--LEKDLAKEYNILAYP 129 (304)
Q Consensus 53 ~~~~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~P 129 (304)
..+..|++++.++|++.+ +.+++++|+|||+||++|+++.|.|+++++.+++.+.++.|||+ +++++|++|+|.++|
T Consensus 14 ~~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~P 93 (298)
T 3ed3_A 14 DSDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFP 93 (298)
T ss_dssp SSCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSS
T ss_pred CCCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccc
Confidence 345789999999999998 56789999999999999999999999999999888999999998 689999999999999
Q ss_pred EEEEEeCCe-----------------EEEEeeCCCCHHHHHHHHHHHhCCCceecCCHHHHHHhhccCCeEEEEEecCCC
Q 021976 130 TLYLFVAGV-----------------RQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLE 192 (304)
Q Consensus 130 t~~~~~~g~-----------------~~~~~~g~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~ 192 (304)
|+++|++|+ ....|.|.++.+.|.+|+.+.+++.+..+.+.++++.+++.++...|++|.. .
T Consensus 94 t~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~fs~-~ 172 (298)
T 3ed3_A 94 TLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVLFSK-Q 172 (298)
T ss_dssp EEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEEEES-S
T ss_pred eEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEEEcC-C
Confidence 999999885 4789999999999999999999999999999999999998754445555543 4
Q ss_pred CccHHHHHHHh-ccCCceeEEEecCHHHHhhcCCC--------------------CCCCCCeEEEEecCCCceecccC-C
Q 021976 193 GMESEELAAAS-KLHSDVNFYQTTSADVAEFFHIH--------------------PKSKRPALIFLHLEAGKATPFRH-Q 250 (304)
Q Consensus 193 ~~~~~~~~~~a-~~~~~~~f~~~~~~~l~~~~~i~--------------------~~~~~P~lv~~~~~~~~~~~y~g-~ 250 (304)
+.....|..+| .+++++.|+.+.+.++++.+++. .....|++++|+..++++..|+| .
T Consensus 173 ~~~~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~g~~ 252 (298)
T 3ed3_A 173 DKISPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYEGNS 252 (298)
T ss_dssp SSCCHHHHHHHHHTBTTEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECCCSS
T ss_pred CcchHHHHHHHHHhhcCcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEEecccc
Confidence 55678888888 68899999999988877555320 00248999999998889999996 6
Q ss_pred CCHHHHHHHHh--cCCCCcEEeeCcc-chhhhhc
Q 021976 251 FTRLAIANFVT--HTKHPLVVTLTIH-NAQFVFQ 281 (304)
Q Consensus 251 ~~~~~i~~fi~--~~~~p~~~~l~~~-~~~~~~~ 281 (304)
++.++|.+||. .+..|.+.+++.- .+.+.+.
T Consensus 253 ~~~~~i~~fi~~~~~~~p~~~~ls~~~~~~~~~~ 286 (298)
T 3ed3_A 253 INKNDISKFLRDTFSITPNEGPFSRRSEYIAYLK 286 (298)
T ss_dssp CCHHHHHHHHHHHHTCCCSSSTTSHHHHHHHHHH
T ss_pred CCHHHHHHHHHhhcCCCCCcCCCchHHHHHHHHh
Confidence 89999999999 8899999999984 3433333
No 6
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=100.00 E-value=6.6e-34 Score=263.25 Aligned_cols=221 Identities=18% Similarity=0.278 Sum_probs=200.4
Q ss_pred CCCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcccHHHHHhCCCccccEEEE
Q 021976 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (304)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (304)
++.|..+++++|++.+.++++++|+|||+||++|+++.|.|+++++.+++ ++.++.|||++++++|++|||+++||+++
T Consensus 13 ~~~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 92 (504)
T 2b5e_A 13 DSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGFPSLKI 92 (504)
T ss_dssp TSSCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCCcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcCCEEEE
Confidence 46899999999999998899999999999999999999999999999988 59999999999999999999999999999
Q ss_pred EeCCeE--EEEeeCCCCHHHHHHHHHHHhCCCceecCCHHHHHHhhccCC--eEEEEEecCCCCccHHHHHHHh-ccCCc
Q 021976 134 FVAGVR--QFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTVES--KLVLGFLHDLEGMESEELAAAS-KLHSD 208 (304)
Q Consensus 134 ~~~g~~--~~~~~g~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~--~~~v~f~~~~~~~~~~~~~~~a-~~~~~ 208 (304)
|++|+. +.+|.|.++.+.|.+|+.+.+++++..+++ ++++++.++ ..+|+||.+..+.....|..+| .++++
T Consensus 93 ~~~g~~~~~~~~~G~~~~~~l~~~l~~~~~~~v~~i~~---~~~~~~~~~~~~~~v~~f~~~~~~~~~~f~~~A~~~~~~ 169 (504)
T 2b5e_A 93 FKNSDVNNSIDYEGPRTAEAIVQFMIKQSQPAVAVVAD---LPAYLANETFVTPVIVQSGKIDADFNATFYSMANKHFND 169 (504)
T ss_dssp EETTCTTCEEECCSCCSHHHHHHHHHHHTSCSEEECSC---HHHHHHHSCCSSCEEEEEESCCHHHHHHHHHHHHHTTTT
T ss_pred EeCCccccceeecCCCCHHHHHHHHHHhcCCcceeHHH---HHHHHhcCCCceEEEEEeCCCCchHHHHHHHHHHHhhcC
Confidence 999976 889999999999999999999999999987 778887777 8888899887888888999988 68899
Q ss_pred eeEEEecCHHHHhhcCCCCCCCCCeEEEEecCCCceecccCC-C---CHHHHHHHHhcCCCCcEEeeCccchhhhhcCCC
Q 021976 209 VNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQ-F---TRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPR 284 (304)
Q Consensus 209 ~~f~~~~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~-~---~~~~i~~fi~~~~~p~~~~l~~~~~~~~~~~~~ 284 (304)
+.|+.+. ++++.++++ +++|++.+ .+..|+|. + +.++|.+||..+++|++++++.+++..++.++.
T Consensus 170 ~~F~~~~--~~~~~~~~~-------i~l~~~~~-~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~~~~~~~~~~~~ 239 (504)
T 2b5e_A 170 YDFVSAE--NADDDFKLS-------IYLPSAMD-EPVVYNGKKADIADADVFEKWLQVEALPYFGEIDGSVFAQYVESGL 239 (504)
T ss_dssp CEEEEEE--CTTSCCEEE-------EEETTEEE-EEEECCSCHHHHTSHHHHHHHHHHHSSCSSCBCCHHHHHHHHHTTS
T ss_pred cEEEEEH--HHHHhcCCe-------EEecCCCC-cccccCCcccccCCHHHHHHHHHhcccCCcccCCHhHHHHHhcCCC
Confidence 9999887 677777653 77888766 78889998 6 999999999999999999999999999999887
Q ss_pred C-eee
Q 021976 285 K-QVI 288 (304)
Q Consensus 285 ~-~~~ 288 (304)
+ +++
T Consensus 240 ~~~~l 244 (504)
T 2b5e_A 240 PLGYL 244 (504)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 7 543
No 7
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=100.00 E-value=2.4e-32 Score=228.89 Aligned_cols=207 Identities=23% Similarity=0.416 Sum_probs=177.2
Q ss_pred CCCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCC---cEEEEEeCcccHHHHHhCCCccccEE
Q 021976 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGE---ADLVMVDAYLEKDLAKEYNILAYPTL 131 (304)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~~~~~~~~v~~~Pt~ 131 (304)
++.+..+++++|++.+.++++++|+|||+||++|+++.|.|+++++++++. +.++.||+++++++|++|||.++||+
T Consensus 14 ~~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 93 (241)
T 3idv_A 14 ENGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTI 93 (241)
T ss_dssp ETTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCEE
Confidence 468999999999999999999999999999999999999999999999874 99999999999999999999999999
Q ss_pred EEEeCCeEEEEeeCCCCHHHHHHHHHHHhCCC------ceecCCHHHHHHhhccCCeEEEEEecCCCCcc---HHHHHHH
Q 021976 132 YLFVAGVRQFQFFGERTRDVISAWVREKMTLG------TYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAA 202 (304)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~------~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~ 202 (304)
++|++|+.+ +|.|.++.+.+.+|+.+...+. .....+.++++.++.+++.++|.|+++||+++ ...+..+
T Consensus 94 ~~~~~g~~~-~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~ 172 (241)
T 3idv_A 94 KILKKGQAV-DYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKA 172 (241)
T ss_dssp EEEETTEEE-ECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHH
T ss_pred EEEcCCCcc-cccCcccHHHHHHHHhhccCcccccccccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHH
Confidence 999999655 7999999999999999988653 22223667788888888899999999999874 3455555
Q ss_pred h-ccCC---ceeEEEe---cCHHHHhhcCCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhcCCCCc
Q 021976 203 S-KLHS---DVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHPL 267 (304)
Q Consensus 203 a-~~~~---~~~f~~~---~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p~ 267 (304)
+ .+.+ ++.|+.+ .+++++++|+|.+ +|++++|+++ +...|.|..+.++|.+||.++.-|.
T Consensus 173 a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~~~~~g--~~~~~~g~~~~~~l~~~l~~~~~~~ 239 (241)
T 3idv_A 173 AKELSKRSPPIPLAKVDATAETDLAKRFDVSG---YPTLKIFRKG--RPYDYNGPREKYGIVDYMIEQSGAA 239 (241)
T ss_dssp HHHHHTSSSCCCEEEEETTTCHHHHHHTTCCS---SSEEEEEETT--EEEECCSCCSHHHHHHHHHHHTTCT
T ss_pred HHHHhccCCcEEEEEEECCCCHHHHHHcCCcc---cCEEEEEECC--eEEEecCCCCHHHHHHHHHhhhCCC
Confidence 5 3332 3666654 5889999999997 9999999875 5667999999999999999877653
No 8
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.97 E-value=7.4e-29 Score=240.71 Aligned_cols=218 Identities=17% Similarity=0.248 Sum_probs=191.9
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEe
Q 021976 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (304)
+.+..+++++|++. .+++++|+|||+||++|+++.|.|+++++++++++.|+.|||++++.++++|||.++||+++++
T Consensus 440 ~~v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 517 (780)
T 3apo_A 440 SHVTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQAYPTTVVFN 517 (780)
T ss_dssp SCEEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred CCCEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcCCeEEEEc
Confidence 45888999998876 7899999999999999999999999999999889999999999999999999999999999999
Q ss_pred CCeEEEEeeCCCCHHHHHHHHHHHhCCCceecCCHHHHHHhhcc---CCeEEEEEecCCCCc---cHHHHHHHh-ccCCc
Q 021976 136 AGVRQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTV---ESKLVLGFLHDLEGM---ESEELAAAS-KLHSD 208 (304)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~---~~~~~v~f~~~~~~~---~~~~~~~~a-~~~~~ 208 (304)
+|+. ..|.|..+.+.|.+|+.+.+.+++..++ .+++++++.. +..++|.|+.+||+. ....+.++| .++++
T Consensus 518 ~g~~-~~~~g~~~~~~l~~fi~~~~~~~v~~l~-~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~ 595 (780)
T 3apo_A 518 QSSI-HEYEGHHSAEQILEFIEDLRNPSVVSLT-PSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGL 595 (780)
T ss_dssp TTEE-EEECSCSCHHHHHHHHHHHHSCSEEECC-HHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT
T ss_pred CCce-eeecCcccHHHHHHHHHhhcccceeecC-cccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCC
Confidence 8854 8899999999999999999999999985 5788888764 457899999999986 455566777 57778
Q ss_pred eeEEEe---cCHHHHhhcCCCCCCCCCeEEEEecCCC---ceecccC-CCCHHHHHHHHhcCCCCcEEeeCccchhhhh
Q 021976 209 VNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAG---KATPFRH-QFTRLAIANFVTHTKHPLVVTLTIHNAQFVF 280 (304)
Q Consensus 209 ~~f~~~---~~~~l~~~~~i~~~~~~P~lv~~~~~~~---~~~~y~g-~~~~~~i~~fi~~~~~p~~~~l~~~~~~~~~ 280 (304)
+.|+.+ .+..+++.|++++ +|++++|+.++. .+..|+| .++.++|.+||.+...|.+.+++.+++.+..
T Consensus 596 v~~~~vd~~~~~~l~~~~~v~~---~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~v~~l~~~~~~~~~ 671 (780)
T 3apo_A 596 INVGSVDCGQYHSFCTQENVQR---YPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQASIDLTPQTFNEKV 671 (780)
T ss_dssp SEEEEEETTTTHHHHHHTTCCS---SSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCCCSEEECHHHHHHHT
T ss_pred eEEEEEECcchHHHHHHcCCCC---CCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhcccccccCCHHHHHHHH
Confidence 888865 5778999999996 999999988754 4678999 8999999999999999999999999987644
No 9
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.97 E-value=2.4e-29 Score=244.16 Aligned_cols=220 Identities=16% Similarity=0.246 Sum_probs=180.2
Q ss_pred cCCCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEE
Q 021976 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (304)
Q Consensus 54 ~~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (304)
.+..|..++.++|++.++++++++|+|||+||++|+++.|.|+++++.+++.+.+++|||++++++|++|||.++||+++
T Consensus 114 ~~~~v~~l~~~~f~~~i~~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 193 (780)
T 3apo_A 114 DDPEIITLERREFDAAVNSGELWFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFI 193 (780)
T ss_dssp TCTTEEECCHHHHHHHHTSSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCSSCC--------CEEEE
T ss_pred CCcceeeechHhHHhhhcCCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCceEEEEEeCCCcHHHHHHcCCceeeeEEE
Confidence 45689999999999999889999999999999999999999999999998889999999999999999999999999999
Q ss_pred EeCCeEEEEeeCCCCHHHHHHHHHHHhCCCceecCCH---HHHHHhhccCCeEEEEEecCCC-CccHHHHHHHh-ccCCc
Q 021976 134 FVAGVRQFQFFGERTRDVISAWVREKMTLGTYSITTT---DEAERILTVESKLVLGFLHDLE-GMESEELAAAS-KLHSD 208 (304)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~l~~~---~~~~~~~~~~~~~~v~f~~~~~-~~~~~~~~~~a-~~~~~ 208 (304)
|++|+.+.+|.|.++.+.|.+|+.+.+++.+..+++. +++..++..+.+++++|++... .+....+..++ .+++.
T Consensus 194 ~~~g~~~~~~~G~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~vi~f~~~~~~~~~~~~~~~l~~~f~~~ 273 (780)
T 3apo_A 194 FRSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELSTGNFVNAIETAFAAGVGWLITFCSKGEDCLTSQTRLRLSGMLDGL 273 (780)
T ss_dssp ECTTSCCEECCSCSCHHHHHHHHHTTSCCCEEECCHHHHHHHHHHHHHHTCEEEEEEECTTSCCCCHHHHHHHHHHTTTT
T ss_pred EeCCcEeeEecCCCCHHHHHHHHHHhchhhheeccchhhHHHHHhhhccCCCEEEEEecCcccccCHHHHHHHHHHhhcc
Confidence 9999888999999999999999999999999999887 6788888777888888887654 34566666665 57888
Q ss_pred eeEEEe---cCHHHHhhcCCCCCCCCCeEEEEecC------CCceecccCCCCHHHHHHHHhcCCCCcEEeeCccchhh
Q 021976 209 VNFYQT---TSADVAEFFHIHPKSKRPALIFLHLE------AGKATPFRHQFTRLAIANFVTHTKHPLVVTLTIHNAQF 278 (304)
Q Consensus 209 ~~f~~~---~~~~l~~~~~i~~~~~~P~lv~~~~~------~~~~~~y~g~~~~~~i~~fi~~~~~p~~~~l~~~~~~~ 278 (304)
+.|+.+ .+.+++++++++. .| +++|+++ +.....|.|+++.++|..||.+ ..|.+++++.+++..
T Consensus 274 ~~f~~v~c~~~~~l~~~~gi~~---~p-~~~f~~~~~~~~~~~~~~~y~g~~~~~~i~~~i~~-~~p~v~~it~~~f~~ 347 (780)
T 3apo_A 274 VNVGWVDCDAQDSLCKSLDTTA---ST-TAYFPPGATLNDREKSSVLFLNSLDAKEIYMEIIH-NLPDFELLSANQLED 347 (780)
T ss_dssp EEEEEEETTTSHHHHTCC--------C-EEEECTTCCSSTTTGGGSEEECCCCHHHHHHHHHH-HSCCCCEECHHHHHH
T ss_pred ceEEEEEcCCCHHHHHHhCCCC---Cc-eeeeccccccCCCcccceeccccccHHHHHHHHHH-hCCCcccCCHHHHHH
Confidence 888876 6678999999996 66 6677653 2346788999999999999995 899999999877765
No 10
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.95 E-value=1.4e-25 Score=188.23 Aligned_cols=201 Identities=18% Similarity=0.264 Sum_probs=150.2
Q ss_pred CCCcEEcChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC---CcEEEEEeC--cccHHHHHhCCCccc
Q 021976 55 AKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG---EADLVMVDA--YLEKDLAKEYNILAY 128 (304)
Q Consensus 55 ~~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~---~~~~~~vd~--~~~~~~~~~~~v~~~ 128 (304)
.+.|..+++++|++.+ ..+++++|+|||+||++|+++.|.|+++++++++ .+.++.||| ++++++|++|+|.++
T Consensus 11 ~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~ 90 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGF 90 (244)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSS
T ss_pred CCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCcc
Confidence 4689999999999877 5569999999999999999999999999999987 799999999 678999999999999
Q ss_pred cEEEEEeCCe-----EEEEeeCCCCHHHHHHHHHHHhCCCce---------ecCCHHHHHHhhcc--CCeEEEEEecCCC
Q 021976 129 PTLYLFVAGV-----RQFQFFGERTRDVISAWVREKMTLGTY---------SITTTDEAERILTV--ESKLVLGFLHDLE 192 (304)
Q Consensus 129 Pt~~~~~~g~-----~~~~~~g~~~~~~l~~~i~~~~~~~~~---------~l~~~~~~~~~~~~--~~~~~v~f~~~~~ 192 (304)
||+++|++|+ ....+.| .+.+.|.+++.+.+..... ...+.+++..++.. .....+.| .+..
T Consensus 91 Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f-~~~~ 168 (244)
T 3q6o_A 91 PTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIF-EXGG 168 (244)
T ss_dssp SEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEE-ECTT
T ss_pred CEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEE-EECC
Confidence 9999999642 2235666 6999999999998854332 23456778877744 33444444 4433
Q ss_pred CccHHHHHHHhccCCceeEEEecC--HHHHhhcCCCCCCCCCeEEEEecCCCceecccCC-CCHHHHHHHHh
Q 021976 193 GMESEELAAASKLHSDVNFYQTTS--ADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQ-FTRLAIANFVT 261 (304)
Q Consensus 193 ~~~~~~~~~~a~~~~~~~f~~~~~--~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~-~~~~~i~~fi~ 261 (304)
+.....+...-.....+.+..+.+ .+++++|+|+. +|+++++.+++ +...++.. -+.+.+..+++
T Consensus 169 ~~~~~~~~~d~~~~~~i~v~~~~~~~~~l~~~f~v~~---~Pslvl~~~~g-~~~~~~~~~~~r~~~~~~l~ 236 (244)
T 3q6o_A 169 SYLAREVALDLSQHKGVAVRRVLNTEANVVRKFGVTD---FPSCYLLFRNG-SVSRVPVLMESRSFYTAYLQ 236 (244)
T ss_dssp CCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCC---SSEEEEEETTS-CEEECCCSSSSHHHHHHHHH
T ss_pred cchHHHHHHHhccCCceEEEEEeCchHHHHHHcCCCC---CCeEEEEeCCC-CeEeeccccccHHHHHHHHH
Confidence 333332222212335566665544 89999999997 99999998765 66666643 34566666665
No 11
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.94 E-value=2.5e-25 Score=184.42 Aligned_cols=195 Identities=13% Similarity=0.177 Sum_probs=155.4
Q ss_pred hhcHHHHh---cCCCcEEEEEEcC-CChhhhhhHHHHHHHHHHhhCCcEEEEEeCcc--cHHHHHhCCCccccEEEEEeC
Q 021976 63 GKNFSEFM---GKNRNVMVMFYAN-WCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL--EKDLAKEYNILAYPTLYLFVA 136 (304)
Q Consensus 63 ~~~~~~~~---~~~~~~lv~f~a~-wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~ 136 (304)
.+++++.+ .++++++|.||++ ||++|+++.|.++++++. .+++.++.|||++ ++++|++|||.++||+++|++
T Consensus 9 ~~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~ 87 (226)
T 1a8l_A 9 KKVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQD 87 (226)
T ss_dssp HHHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEET
T ss_pred HHHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcC
Confidence 34566666 2456788999999 999999999999999975 4489999999999 999999999999999999998
Q ss_pred CeEE-EEeeCCCCHHHHHHHHHHHhC--CCceecCCHHHHHHhhccCCeE-EEEEecCCCCccHH---HHHHHh-ccC--
Q 021976 137 GVRQ-FQFFGERTRDVISAWVREKMT--LGTYSITTTDEAERILTVESKL-VLGFLHDLEGMESE---ELAAAS-KLH-- 206 (304)
Q Consensus 137 g~~~-~~~~g~~~~~~l~~~i~~~~~--~~~~~l~~~~~~~~~~~~~~~~-~v~f~~~~~~~~~~---~~~~~a-~~~-- 206 (304)
|+.. .+|.|..+.+.+.+|+...+. .....+ +.+.++.+.+.+.++ ++.|+++||+++.+ .+..++ .+.
T Consensus 88 g~~~~~~~~G~~~~~~l~~~l~~~l~~~~~~~~l-~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~ 166 (226)
T 1a8l_A 88 GKDFGVRYFGLPAGHEFAAFLEDIVDVSREETNL-MDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKA 166 (226)
T ss_dssp TBCCSEEEESCCCTTHHHHHHHHHHHHHHTCCCC-CHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHT
T ss_pred CceeeEEEeccCcHHHHHHHHHHHHhhcCCCCCC-CHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccc
Confidence 8664 789999999999999988653 233344 566777776666666 89999999998543 344444 233
Q ss_pred --CceeEEEe---cCHHHHhhcCCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 207 --SDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 207 --~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
+++.+..+ .+++++++|++.+ +|++++++.++ ....+.|..+.+.|.+||.+.
T Consensus 167 ~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 167 GKGKILGDMVEAIEYPEWADQYNVMA---VPKIVIQVNGE-DRVEFEGAYPEKMFLEKLLSA 224 (226)
T ss_dssp TCCCEEEEEEEGGGCHHHHHHTTCCS---SCEEEEEETTE-EEEEEESCCCHHHHHHHHHHH
T ss_pred cCCcEEEEEEEcccCHHHHHhCCCcc---cCeEEEEeCCc-eeEEEcCCCCHHHHHHHHHHh
Confidence 46777654 6788999999997 99999998654 567889999999999999763
No 12
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.93 E-value=1e-24 Score=181.17 Aligned_cols=192 Identities=11% Similarity=0.144 Sum_probs=152.4
Q ss_pred hcHHHHh--cCCCcEEEEEE-----cCCChhhhhhHHHHHHHHHHh--hCCcEEEEEeCcccHHHHHhCCCccccEEEEE
Q 021976 64 KNFSEFM--GKNRNVMVMFY-----ANWCYWSKKLAPEFAAAAKML--KGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (304)
Q Consensus 64 ~~~~~~~--~~~~~~lv~f~-----a~wC~~C~~~~~~~~~~~~~~--~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (304)
+.+++.+ +..++++|.|| ++||++|+++.|.|+++++.+ .+++.++.|||++++++|++|||+++||+++|
T Consensus 9 ~~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~ 88 (229)
T 2ywm_A 9 MQLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVIE 88 (229)
T ss_dssp HHHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEEE
T ss_pred HHHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEEE
Confidence 4455555 33455555555 899999999999999999888 55899999999999999999999999999999
Q ss_pred eCCeEEEEeeCCCCHHHHHHHHHHHhC--CCceecCCHHHHHHhhccCCeE-EEEEecCCCCccH---HHHHHHhccCCc
Q 021976 135 VAGVRQFQFFGERTRDVISAWVREKMT--LGTYSITTTDEAERILTVESKL-VLGFLHDLEGMES---EELAAASKLHSD 208 (304)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~--~~~~~l~~~~~~~~~~~~~~~~-~v~f~~~~~~~~~---~~~~~~a~~~~~ 208 (304)
++|+...+|.|.++.+++.+|+.+.+. .....+ +.+.++.+.+.+.++ ++.|+++||+++. ..+..++...++
T Consensus 89 ~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~~ 167 (229)
T 2ywm_A 89 GDKDYGIRYIGLPAGLEFTTLINGIFHVSQRKPQL-SEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALANDY 167 (229)
T ss_dssp SSSCCCEEEESCCCTTHHHHHHHHHHHHHTTCCSC-CHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCTT
T ss_pred CCCcccceecCCccHHHHHHHHHHHHhccCCccCC-CHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCCC
Confidence 877788999999999999999988753 344555 567788777665555 7779999999853 344455533357
Q ss_pred eeEEEe---cCHHHHhhcCCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 209 VNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 209 ~~f~~~---~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
+.+..+ .+++++++|++.+ +|++++ ++ +...|.|..+.++|.+||.+.
T Consensus 168 v~~~~vd~~~~~~l~~~~~v~~---~Pt~~~--~G--~~~~~~G~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 168 ITSKVIDASENQDLAEQFQVVG---VPKIVI--NK--GVAEFVGAQPENAFLGYIMAV 218 (229)
T ss_dssp EEEEEEEGGGCHHHHHHTTCCS---SSEEEE--GG--GTEEEESCCCHHHHHHHHHHH
T ss_pred eEEEEEECCCCHHHHHHcCCcc---cCEEEE--CC--EEEEeeCCCCHHHHHHHHHHH
Confidence 777654 5789999999997 999987 33 455689999999999999854
No 13
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.93 E-value=1.3e-24 Score=169.55 Aligned_cols=136 Identities=21% Similarity=0.306 Sum_probs=124.1
Q ss_pred ccccccccCchhhhcccCCCCCCCCCccCCCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCc
Q 021976 27 QSHEDLKAEPDELELTNLNNNHTWPLLYAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEA 106 (304)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~ 106 (304)
.+|...+..|+........|+.+....-...+.++++++|++.+.++++++|+||++||++|+.+.|.|+++++++++++
T Consensus 18 ~~c~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v 97 (155)
T 2ppt_A 18 LACGQANKVPSDRLAAGPKCGICGAGLITGKVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQV 97 (155)
T ss_dssp TTTCCEEEEEGGGTTSCCBCTTTCCBSCCSSEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccccccccCCcccccCCCCCCcCCccccCCCCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCE
Confidence 46777888888888877888887766667789999999999988778999999999999999999999999999998889
Q ss_pred EEEEEeCcccHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHHHHHhCC
Q 021976 107 DLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (304)
Q Consensus 107 ~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (304)
.|+.||++++++++++|+|.++||+++|++|+.+.++.|..+.++|.+|+.+.++.
T Consensus 98 ~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 98 RLAKIDTQAHPAVAGRHRIQGIPAFILFHKGRELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp EEEEEETTTSTHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEEEEeCCccHHHHHHcCCCcCCEEEEEeCCeEEEEecCCCCHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999998754
No 14
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.93 E-value=3.8e-24 Score=189.70 Aligned_cols=206 Identities=12% Similarity=0.185 Sum_probs=165.9
Q ss_pred CCcEEcChhcHHHHhcCC-CcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCc--ccHHHHHhCCCcc--ccE
Q 021976 56 KDVVSLNGKNFSEFMGKN-RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY--LEKDLAKEYNILA--YPT 130 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~-~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~--~Pt 130 (304)
+.+.+++.+++.+.+..+ ++++|.||++||++|+++.|.|+++|+++++++.|+.+||+ +++.+|+.|||.+ +|+
T Consensus 117 p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~ 196 (361)
T 3uem_A 117 PLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPA 196 (361)
T ss_dssp CSEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSE
T ss_pred CcceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccCCcc
Confidence 568889999999888554 67899999999999999999999999999989999999999 7899999999988 999
Q ss_pred EEEEeCCeEEEEee---CCCCHHHHHHHHHHHhCC------------------CceecCCHHHHHHhh-ccCCeEEEEEe
Q 021976 131 LYLFVAGVRQFQFF---GERTRDVISAWVREKMTL------------------GTYSITTTDEAERIL-TVESKLVLGFL 188 (304)
Q Consensus 131 ~~~~~~g~~~~~~~---g~~~~~~l~~~i~~~~~~------------------~~~~l~~~~~~~~~~-~~~~~~~v~f~ 188 (304)
++++..|+...+|. |..+.+.|.+|+.+.+.. ++..++. ++++..+ ++++.++|.|+
T Consensus 197 ~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~-~~f~~~~~~~~k~~lv~f~ 275 (361)
T 3uem_A 197 VRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVG-KNFEDVAFDEKKNVFVEFY 275 (361)
T ss_dssp EEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECT-TTHHHHHTCTTCEEEEEEE
T ss_pred EEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeec-CchhhhcccCCCcEEEEEe
Confidence 99999865667776 789999999999998642 2444533 4555555 56789999999
Q ss_pred cCCCCccH---HHHHHHh-ccCC--ceeEEEe-cCHHHHhhcCCCCCCCCCeEEEEecC-CCceecccCCCCHHHHHHHH
Q 021976 189 HDLEGMES---EELAAAS-KLHS--DVNFYQT-TSADVAEFFHIHPKSKRPALIFLHLE-AGKATPFRHQFTRLAIANFV 260 (304)
Q Consensus 189 ~~~~~~~~---~~~~~~a-~~~~--~~~f~~~-~~~~l~~~~~i~~~~~~P~lv~~~~~-~~~~~~y~g~~~~~~i~~fi 260 (304)
++||+++. ..+.+++ .+.+ ++.++.+ .....+++|++.+ +|++++|+.+ +.....|.|.++.++|.+||
T Consensus 276 a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~---~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l 352 (361)
T 3uem_A 276 APWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHS---FPTLKFFPASADRTVIDYNGERTLDGFKKFL 352 (361)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCBCSSCCCCS---SSEEEEECSSSSCCCEECCSCSSHHHHHHHH
T ss_pred cCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccchhhcCCcc---cCeEEEEECCCCcceeEecCCCCHHHHHHHH
Confidence 99999753 3455555 3444 3677654 2333378999997 9999999766 44689999999999999999
Q ss_pred hcCCC
Q 021976 261 THTKH 265 (304)
Q Consensus 261 ~~~~~ 265 (304)
.+++-
T Consensus 353 ~~~~~ 357 (361)
T 3uem_A 353 ESGGQ 357 (361)
T ss_dssp TTTSC
T ss_pred HhcCC
Confidence 98753
No 15
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.92 E-value=3.2e-23 Score=190.54 Aligned_cols=202 Identities=16% Similarity=0.258 Sum_probs=151.8
Q ss_pred CCCcEEcChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC---CcEEEEEeCc--ccHHHHHhCCCccc
Q 021976 55 AKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG---EADLVMVDAY--LEKDLAKEYNILAY 128 (304)
Q Consensus 55 ~~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~---~~~~~~vd~~--~~~~~~~~~~v~~~ 128 (304)
.+.|..+++++|++.+ +++++++|+|||+||++|+++.|.|+++++++++ .+.++.|||+ +++++|++|||.++
T Consensus 11 ~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~ 90 (519)
T 3t58_A 11 SDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGF 90 (519)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSB
T ss_pred CCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCccc
Confidence 4679999999999877 6679999999999999999999999999999987 7999999995 58999999999999
Q ss_pred cEEEEEeC----CeEEEEeeCCCCHHHHHHHHHHHhCCCc----------eecCCHHHHHHhhccC--CeEEEEEecCCC
Q 021976 129 PTLYLFVA----GVRQFQFFGERTRDVISAWVREKMTLGT----------YSITTTDEAERILTVE--SKLVLGFLHDLE 192 (304)
Q Consensus 129 Pt~~~~~~----g~~~~~~~g~~~~~~l~~~i~~~~~~~~----------~~l~~~~~~~~~~~~~--~~~~v~f~~~~~ 192 (304)
||+++|++ |+....+.|..+.+.+.+++.+.+.... ..+ +.++++.++..+ ...++ +|.+..
T Consensus 91 PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~i-t~~~l~~~l~~~~~~~val-lF~~~~ 168 (519)
T 3t58_A 91 PTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPA-KLNDIDGFFTRNKADYLAL-VFERED 168 (519)
T ss_dssp SEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBC-CHHHHTTGGGSCCCSEEEE-EEECTT
T ss_pred CEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcC-CHHHHHHHhccCCCCeEEE-EecCCc
Confidence 99999984 5456677888999999999999886432 333 557788877553 34444 444444
Q ss_pred CccHHHHHHHhccCCceeEEEe--cCHHHHhhcCCCCCCCCCeEEEEecCCCceecccCCC-CHHHHHHHHhc
Q 021976 193 GMESEELAAASKLHSDVNFYQT--TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQF-TRLAIANFVTH 262 (304)
Q Consensus 193 ~~~~~~~~~~a~~~~~~~f~~~--~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~-~~~~i~~fi~~ 262 (304)
+...+.+...-.....+.+..+ .+.+++++|||+. +|+++++.+++ +...++... ....+..++.+
T Consensus 169 s~~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~~---~Pslvl~~~nG-k~~~~~v~~~~r~~~~~~l~~ 237 (519)
T 3t58_A 169 SYLGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVTD---FPSCYLLLRNG-SVSRVPVLVESRSFYTSYLRG 237 (519)
T ss_dssp CCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCC---SSEEEEEETTS-CEEECCCSSCSHHHHHHHHTT
T ss_pred hHHHHHHHHHhhccCCeeEEEecCchHHHHHHcCCCC---CCeEEEEeCCC-ceeecccccccHHHHHHHHHH
Confidence 4433333332233344555544 5579999999997 99999999876 444444333 23556677764
No 16
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.92 E-value=2.1e-24 Score=156.73 Aligned_cols=96 Identities=23% Similarity=0.437 Sum_probs=88.7
Q ss_pred ChhcHHHHhc--CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEeCCeE
Q 021976 62 NGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVR 139 (304)
Q Consensus 62 ~~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 139 (304)
+.++|++.+. ++++++|+|||+||+||+.+.|.++++++.++ ++.++.||++++++++++|||+++||+++|++|+.
T Consensus 7 ~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~d~~~~l~~~~~V~~~PT~~~~~~G~~ 85 (105)
T 3zzx_A 7 DQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS-DVVFLKVDVDECEDIAQDNQIACMPTFLFMKNGQK 85 (105)
T ss_dssp SHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TEEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC-CeEEEEEecccCHHHHHHcCCCeecEEEEEECCEE
Confidence 4578998883 47899999999999999999999999999987 68999999999999999999999999999999999
Q ss_pred EEEeeCCCCHHHHHHHHHHH
Q 021976 140 QFQFFGERTRDVISAWVREK 159 (304)
Q Consensus 140 ~~~~~g~~~~~~l~~~i~~~ 159 (304)
+.++.| .+.++|.++|+++
T Consensus 86 v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 86 LDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp EEEEES-CCHHHHHHHHHHH
T ss_pred EEEEeC-cCHHHHHHHHHhc
Confidence 999999 4899999999875
No 17
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.92 E-value=3.5e-24 Score=165.82 Aligned_cols=136 Identities=19% Similarity=0.350 Sum_probs=123.5
Q ss_pred ccccccccCchhhhcccCCCCCCCCCccCCCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCc
Q 021976 27 QSHEDLKAEPDELELTNLNNNHTWPLLYAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEA 106 (304)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~ 106 (304)
.+|...+.++.......+.|+.+........+..+++++|++.+.++++++|+||++||++|+.+.|.|+++++++++++
T Consensus 9 ~~c~~~n~~p~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~ 88 (148)
T 3p2a_A 9 TACMATNRLPEERIDDGAKCGRCGHSLFDGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKV 88 (148)
T ss_dssp TTTCCEEEEESSCSCSCCBCTTTCCBTTCCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTC
T ss_pred cccccccCCCCcccccCCcchhcCCccccCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCce
Confidence 35666777777777777777777777777899999999999999889999999999999999999999999999998889
Q ss_pred EEEEEeCcccHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHHHHHhCC
Q 021976 107 DLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (304)
Q Consensus 107 ~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (304)
.++.||++++++++++|+|.++||+++|++|+.+.++.|..+.+.|.+|+.+.++.
T Consensus 89 ~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 89 RFVKVNTEAEPALSTRFRIRSIPTIMLYRNGKMIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp EEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHHHS
T ss_pred EEEEEECcCCHHHHHHCCCCccCEEEEEECCeEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999998754
No 18
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.91 E-value=3.1e-23 Score=152.18 Aligned_cols=106 Identities=17% Similarity=0.323 Sum_probs=100.7
Q ss_pred CCcEEcChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEE
Q 021976 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (304)
..+..+++++|++.+ .++++++|.||++||++|+.+.|.++++++.+++++.++.+|++++++++++|+|.++||+++|
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 83 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQILYF 83 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSCEEEEE
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcCCEEEEE
Confidence 468899999999988 7889999999999999999999999999999987899999999999999999999999999999
Q ss_pred eCCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 135 VAGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
++|+.+.++.|..+.+++.+|+.+.++
T Consensus 84 ~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 84 KDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp ETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred ECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 999999999999999999999998764
No 19
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.91 E-value=9.2e-24 Score=158.15 Aligned_cols=105 Identities=12% Similarity=0.113 Sum_probs=97.7
Q ss_pred CCcEEcChhcHHHHhcCCC-cEEEEEEcCCC--hhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEE
Q 021976 56 KDVVSLNGKNFSEFMGKNR-NVMVMFYANWC--YWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~-~~lv~f~a~wC--~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (304)
.....+++++|++.+.+++ +++|+|||+|| ++|+.+.|.+++++++|++++.+++||.+++++++.+|||+++||++
T Consensus 15 ~g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~siPTli 94 (137)
T 2qsi_A 15 NAPTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVCPSLA 94 (137)
T ss_dssp --CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSSSEEE
T ss_pred cCCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccCCEEE
Confidence 4566899999998885555 99999999999 99999999999999999889999999999999999999999999999
Q ss_pred EEeCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 133 LFVAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+|++|+.+.+..|..+.+++.++|.+++
T Consensus 95 lFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 95 VVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9999999999999999999999998876
No 20
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.91 E-value=1.3e-23 Score=158.20 Aligned_cols=105 Identities=17% Similarity=0.337 Sum_probs=95.7
Q ss_pred CCCcEEcChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhh-----CCcEEEEEeCcccHHHHHhCCCccc
Q 021976 55 AKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK-----GEADLVMVDAYLEKDLAKEYNILAY 128 (304)
Q Consensus 55 ~~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~-----~~~~~~~vd~~~~~~~~~~~~v~~~ 128 (304)
++.|..+++++|++.+ +++++++|+|||+||++|+++.|.|+++++.+. +++.++.|||++++++|++|+|.++
T Consensus 14 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~ 93 (127)
T 3h79_A 14 PSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGF 93 (127)
T ss_dssp CCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSS
T ss_pred CCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccC
Confidence 4689999999999988 468999999999999999999999999998764 3699999999999999999999999
Q ss_pred cEEEEEeCCeEE--EEeeCCCCHHHHHHHHHHH
Q 021976 129 PTLYLFVAGVRQ--FQFFGERTRDVISAWVREK 159 (304)
Q Consensus 129 Pt~~~~~~g~~~--~~~~g~~~~~~l~~~i~~~ 159 (304)
||+++|++|+.. .+|.|.++.+.|.+||.++
T Consensus 94 Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 94 PTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp SEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred CEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 999999977543 6899999999999999875
No 21
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.90 E-value=6.1e-24 Score=159.72 Aligned_cols=108 Identities=6% Similarity=0.096 Sum_probs=100.4
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEEcCC--ChhhhhhHHHHHHHHHHhhCC-cEEEEEeCcccHHHHHhCCCccccEEEE
Q 021976 57 DVVSLNGKNFSEFMGKNRNVMVMFYANW--CYWSKKLAPEFAAAAKMLKGE-ADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (304)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~f~a~w--C~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (304)
.+..+++++|++.+.+++++||+|||+| |++|+.+.|.+++++++|+++ +.|++||.+++++++.+|||.++||+++
T Consensus 18 g~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sIPTlil 97 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFPATLV 97 (140)
T ss_dssp TCEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSSSEEEE
T ss_pred CCccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccCCEEEE
Confidence 6778999999998877889999999999 999999999999999999988 9999999999999999999999999999
Q ss_pred EeCCeEEEEeeCCCCHHHHHHHHHHHhCCCc
Q 021976 134 FVAGVRQFQFFGERTRDVISAWVREKMTLGT 164 (304)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~ 164 (304)
|++|+.+.+..|..+.++|.++|.+.+..+.
T Consensus 98 Fk~G~~v~~~~G~~~k~~l~~~i~~~l~~~~ 128 (140)
T 2qgv_A 98 FTGGNYRGVLNGIHPWAELINLMRGLVEPQQ 128 (140)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHHHHC---
T ss_pred EECCEEEEEEecCCCHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999998885443
No 22
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.90 E-value=3.2e-23 Score=152.63 Aligned_cols=106 Identities=21% Similarity=0.363 Sum_probs=100.1
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEeC
Q 021976 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVA 136 (304)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 136 (304)
.++++++++|++.+ ++++++|+||++||++|+++.|.++++++++++++.++.||++++++++++|+|.++||+++|++
T Consensus 2 ~v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~ 80 (112)
T 2voc_A 2 AIVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKD 80 (112)
T ss_dssp CCEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBSEEEEEET
T ss_pred CeEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcccEEEEEeC
Confidence 36789999999988 88999999999999999999999999999998789999999999999999999999999999999
Q ss_pred CeEEEEeeCCCCHHHHHHHHHHHhCCC
Q 021976 137 GVRQFQFFGERTRDVISAWVREKMTLG 163 (304)
Q Consensus 137 g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (304)
|+.+.++.|..+.+++.+|+.++++++
T Consensus 81 G~~~~~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 81 GEVVETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp TEEEEEEESCCCHHHHHHHHHTTSCSC
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHHhh
Confidence 999999999999999999999988655
No 23
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.90 E-value=6.5e-23 Score=149.81 Aligned_cols=105 Identities=25% Similarity=0.424 Sum_probs=100.7
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEe
Q 021976 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (304)
+.+..+++++|++.+.++++++|+||++||++|+.+.|.++++++.+++++.++.+|++++++++++|+|.++||+++|+
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 83 (109)
T 3tco_A 4 DVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPTTLIFV 83 (109)
T ss_dssp CCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred CeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccCCEEEEEc
Confidence 57889999999999988999999999999999999999999999999888999999999999999999999999999999
Q ss_pred CCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 136 AGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+|+.+.++.|..+.+++.+++++++
T Consensus 84 ~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 84 NGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp TTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred CCcEEEeeeccCCHHHHHHHHHHHh
Confidence 9999999999999999999998875
No 24
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.90 E-value=9.2e-23 Score=156.15 Aligned_cols=112 Identities=31% Similarity=0.512 Sum_probs=103.9
Q ss_pred cCCCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCC---cEEEEEeCcccHHHHHhCCCccccE
Q 021976 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGE---ADLVMVDAYLEKDLAKEYNILAYPT 130 (304)
Q Consensus 54 ~~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~~~~~~~~v~~~Pt 130 (304)
....+..++.++|++.+.++++++|+||++||++|+++.|.|+++++++++. +.++.||++++.+++++|+|.++||
T Consensus 15 ~~~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt 94 (140)
T 2dj1_A 15 EENGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPT 94 (140)
T ss_dssp EETTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSE
T ss_pred CCCCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCe
Confidence 3467999999999999988999999999999999999999999999999874 9999999999999999999999999
Q ss_pred EEEEeCCeEEEEeeCCCCHHHHHHHHHHHhCCCcee
Q 021976 131 LYLFVAGVRQFQFFGERTRDVISAWVREKMTLGTYS 166 (304)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~ 166 (304)
+++|++|+ +.+|.|..+.+.|.+|+.++++++...
T Consensus 95 ~~~~~~G~-~~~~~g~~~~~~l~~~l~~~~~~~~~~ 129 (140)
T 2dj1_A 95 IKILKKGQ-AVDYDGSRTQEEIVAKVREVSQPDWTP 129 (140)
T ss_dssp EEEEETTE-EEECCSCCCHHHHHHHHHHHHSSSCCC
T ss_pred EEEEECCc-EEEcCCCCCHHHHHHHHHHhcCCCCCC
Confidence 99999997 889999999999999999999766544
No 25
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.90 E-value=1.1e-22 Score=148.40 Aligned_cols=105 Identities=21% Similarity=0.402 Sum_probs=98.4
Q ss_pred CCcEEcChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEE
Q 021976 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (304)
+.+..+++++|++.+ +++++++|.||++||++|+.+.|.++++++++++++.++.+|++++++++++|+|.++||+++|
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 81 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSSEEEEE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccCEEEEE
Confidence 478899999999655 6789999999999999999999999999999987899999999999999999999999999999
Q ss_pred eCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 135 VAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
++|+.+.++.|..+.+++.+++.+.+
T Consensus 82 ~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 82 KNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred eCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 99999999999999999999998875
No 26
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.90 E-value=1e-22 Score=148.01 Aligned_cols=103 Identities=21% Similarity=0.362 Sum_probs=98.1
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEe
Q 021976 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (304)
..+.++++++|++.+ ++++++|.||++||++|+.+.|.++++++.+++++.++.+|++++++++++|+|.++||+++|+
T Consensus 3 ~~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (106)
T 3die_A 3 MAIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFK 81 (106)
T ss_dssp CCCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSBSEEEEEE
T ss_pred cceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcccCEEEEEe
Confidence 468899999999999 8999999999999999999999999999999988999999999999999999999999999999
Q ss_pred CCeEEEEeeCCCCHHHHHHHHHHH
Q 021976 136 AGVRQFQFFGERTRDVISAWVREK 159 (304)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~ 159 (304)
+|+.+.++.|..+.+++.+++.++
T Consensus 82 ~G~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 82 DGQPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp TTEEEEEEESCCCHHHHHHHHHTT
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHh
Confidence 999999999999999999999865
No 27
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.90 E-value=3e-23 Score=157.72 Aligned_cols=103 Identities=15% Similarity=0.107 Sum_probs=92.3
Q ss_pred cEEcC-hhcHHHHh--cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEE
Q 021976 58 VVSLN-GKNFSEFM--GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (304)
Q Consensus 58 v~~l~-~~~~~~~~--~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (304)
+..++ .++|++.+ .++++++|.|||+||+||+.+.|.++++++++++++.|++||++++++++++|+|.++||+++|
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~siPT~~fF 102 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDPVSVMFF 102 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSSEEEEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCCCEEEEE
Confidence 44554 47898776 3678999999999999999999999999999987899999999999999999999999999999
Q ss_pred eCCeEE--E-------EeeCCCC-HHHHHHHHHHHh
Q 021976 135 VAGVRQ--F-------QFFGERT-RDVISAWVREKM 160 (304)
Q Consensus 135 ~~g~~~--~-------~~~g~~~-~~~l~~~i~~~~ 160 (304)
++|+.+ . +..|..+ .++|.++|+..+
T Consensus 103 k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 103 YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 999876 4 7889877 999999998765
No 28
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.89 E-value=1.1e-22 Score=147.79 Aligned_cols=103 Identities=21% Similarity=0.420 Sum_probs=96.9
Q ss_pred cEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEeCC
Q 021976 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAG 137 (304)
Q Consensus 58 v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g 137 (304)
++++++++|++.++++++++|.||++||++|+.+.|.++++++++++++.++.+|++++++++++|||.++||++++++|
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G 81 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGG 81 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccccEEEEEeCC
Confidence 67899999998888899999999999999999999999999999987899999999999999999999999999999999
Q ss_pred eEEEEeeCCCCHHHHHHHHHHHh
Q 021976 138 VRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 138 ~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+.+.++.|..+.+.+.+++.+.+
T Consensus 82 ~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 82 RPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp EEEEEEESCCCHHHHHHHTTTTT
T ss_pred eEEEEEecCCCHHHHHHHHHHHh
Confidence 98999999999999999987654
No 29
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.89 E-value=6.5e-23 Score=151.93 Aligned_cols=103 Identities=24% Similarity=0.342 Sum_probs=96.0
Q ss_pred CCcEEcChhcHHHHhc--CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEE
Q 021976 56 KDVVSLNGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (304)
......+.++|++.+. ++++++|+|||+||++|+++.|.++++++++++ +.|+.||++++++++++|+|.++||+++
T Consensus 12 ~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~Pt~~~ 90 (116)
T 3qfa_C 12 SVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKSMPTFQF 90 (116)
T ss_dssp CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHHHHHHTTCCSSSEEEE
T ss_pred cccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCccccEEEE
Confidence 4566788999999997 899999999999999999999999999999985 9999999999999999999999999999
Q ss_pred EeCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 134 FVAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
|++|+.+.++.|. +.+.|.+++.+++
T Consensus 91 ~~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 91 FKKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp ESSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred EeCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 9999999999999 9999999998763
No 30
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.89 E-value=2.5e-22 Score=149.48 Aligned_cols=107 Identities=25% Similarity=0.386 Sum_probs=100.0
Q ss_pred cCCCcEEcChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEE
Q 021976 54 YAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (304)
Q Consensus 54 ~~~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (304)
..+.+..+++++|++.+ +++++++|.||++||++|+++.|.++++++++++++.++.||++++++++++|+|.++||++
T Consensus 11 ~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~ 90 (119)
T 1w4v_A 11 GSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVL 90 (119)
T ss_dssp CCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSSSEEE
T ss_pred CceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcccEEE
Confidence 45789999999999766 67899999999999999999999999999999878999999999999999999999999999
Q ss_pred EEeCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 133 LFVAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+|++|+.+.++.|..+.+.+.+++++.+
T Consensus 91 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 91 AMKNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEeCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 9999998899999999999999998876
No 31
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.89 E-value=2e-22 Score=154.45 Aligned_cols=107 Identities=21% Similarity=0.371 Sum_probs=100.7
Q ss_pred CCCcEEcChhcHH-HHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEE
Q 021976 55 AKDVVSLNGKNFS-EFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (304)
Q Consensus 55 ~~~v~~l~~~~~~-~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (304)
...+..+++++|. .++.++++++|+||++||++|+.+.|.|+++++++++++.++.||++++++++++|+|.++||+++
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 84 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPTFKF 84 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEESEEEE
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcCCEEEE
Confidence 3678999999999 555778999999999999999999999999999999889999999999999999999999999999
Q ss_pred EeCCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 134 FVAGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
|++|+.+.++.|..+.+.+.+++.+.+.
T Consensus 85 ~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 112 (140)
T 3hz4_A 85 FCHGRPVWEQVGQIYPSILKNAVRDMLQ 112 (140)
T ss_dssp EETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EeCCcEEEEEcCCCCHHHHHHHHHHHhc
Confidence 9999999999999999999999998874
No 32
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.89 E-value=2.4e-22 Score=146.65 Aligned_cols=105 Identities=24% Similarity=0.438 Sum_probs=99.0
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEeC
Q 021976 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVA 136 (304)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 136 (304)
.+.++++++|+++++++++++|.||++||++|+.+.|.++++++.+++++.++.+|++++++++++|+|.++||+++|++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 81 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIPTVILFKD 81 (109)
T ss_dssp CCEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred cceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCCEEEEEeC
Confidence 57889999999888889999999999999999999999999999998789999999999999999999999999999999
Q ss_pred CeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 137 GVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 137 g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
|+.+.++.|..+.+++.+|+.+.++
T Consensus 82 g~~~~~~~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 82 GQPVEVLVGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp TEEEEEEESCCCHHHHHHHHHTTC-
T ss_pred CcEeeeEeCCCCHHHHHHHHHHHhh
Confidence 9988999999999999999998764
No 33
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.89 E-value=2.7e-22 Score=152.05 Aligned_cols=107 Identities=36% Similarity=0.584 Sum_probs=100.3
Q ss_pred CCCcEEcChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhh----CCcEEEEEeCcccHHHHHhCCCcccc
Q 021976 55 AKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK----GEADLVMVDAYLEKDLAKEYNILAYP 129 (304)
Q Consensus 55 ~~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~----~~~~~~~vd~~~~~~~~~~~~v~~~P 129 (304)
...+..+++++|++.+ .++++++|+||++||++|+++.|.+++++++++ +++.++.||++++++++++|+|.++|
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~P 85 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFP 85 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSS
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeC
Confidence 4678999999999876 678999999999999999999999999999997 68999999999999999999999999
Q ss_pred EEEEEeCCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 130 TLYLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 130 t~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
|+++|++|+.+.+|.|..+.+++.+|+.+.+.
T Consensus 86 t~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 86 TIKIFQKGESPVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp EEEEEETTEEEEEECSCCSHHHHHHHHHHHHH
T ss_pred eEEEEeCCCceEEecCCCCHHHHHHHHHHHhh
Confidence 99999999889999999999999999998874
No 34
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.89 E-value=4.5e-22 Score=146.23 Aligned_cols=106 Identities=19% Similarity=0.390 Sum_probs=98.6
Q ss_pred CCcEEcChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEE
Q 021976 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (304)
..+..+++++|.+.+ +++++++|.||++||++|+++.|.++++++++++++.++.+|++++++++++|+|.++||++++
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 84 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVY 84 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcccEEEEE
Confidence 468899999998665 6789999999999999999999999999999987899999999999999999999999999999
Q ss_pred eCCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 135 VAGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
++|+.+.++.|..+.+.+.+++.+.+.
T Consensus 85 ~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 85 QGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp ETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred eCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 999999999999999999999988763
No 35
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.89 E-value=3.9e-22 Score=145.22 Aligned_cols=104 Identities=21% Similarity=0.400 Sum_probs=97.7
Q ss_pred CCcEEcChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEE
Q 021976 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (304)
+.+..+++++|++.+ .++++++|.||++||++|+.+.|.++++++++++++.++.+|++++++++++|+|.++||+++|
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLMLV 81 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSSEEEEE
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccCEEEEE
Confidence 468899999999766 6789999999999999999999999999999987899999999999999999999999999999
Q ss_pred eCCeEEEEeeCCCCHHHHHHHHHHH
Q 021976 135 VAGVRQFQFFGERTRDVISAWVREK 159 (304)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~ 159 (304)
++|+.+.++.|..+.+.+.+|+.++
T Consensus 82 ~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 82 RDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred eCCEEEEEecCCCCHHHHHHHHHhc
Confidence 9999999999999999999999875
No 36
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.89 E-value=2.6e-22 Score=147.17 Aligned_cols=103 Identities=28% Similarity=0.524 Sum_probs=97.0
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC---CcEEEEEeCcccHHHHHhCCCccccEEE
Q 021976 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG---EADLVMVDAYLEKDLAKEYNILAYPTLY 132 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (304)
+.+..+++++|++.+. +++++|+||++||++|+.+.|.++++++.+.. ++.++.+|++++++++++|+|.++||++
T Consensus 5 ~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 83 (111)
T 3uvt_A 5 STVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLL 83 (111)
T ss_dssp CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEEE
Confidence 5789999999999987 78999999999999999999999999998753 7999999999999999999999999999
Q ss_pred EEeCCeEEEEeeCCCCHHHHHHHHHHH
Q 021976 133 LFVAGVRQFQFFGERTRDVISAWVREK 159 (304)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~ 159 (304)
+|++|+.+.++.|..+.+++.+|++++
T Consensus 84 ~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 84 LFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred EEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 999999999999999999999999875
No 37
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.88 E-value=8e-22 Score=145.47 Aligned_cols=106 Identities=19% Similarity=0.330 Sum_probs=99.8
Q ss_pred CCcEEcChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEE
Q 021976 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (304)
+.+..+++++|++.+ .++++++|.||++||++|+.+.|.++++++.+++++.++.+|++++++++++|+|.++||+++|
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 86 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPALRLV 86 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSSSEEEEE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCceeEEEEE
Confidence 568999999999775 6789999999999999999999999999999987899999999999999999999999999999
Q ss_pred eCCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 135 VAGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
++|+.+.++.|..+.+.+.+++.+.++
T Consensus 87 ~~G~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 87 KGEQILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred cCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 999989999999999999999998875
No 38
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.88 E-value=4.9e-22 Score=143.67 Aligned_cols=103 Identities=24% Similarity=0.448 Sum_probs=97.3
Q ss_pred cEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEeCC
Q 021976 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAG 137 (304)
Q Consensus 58 v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g 137 (304)
|..+++++|++.+.++++++|.||++||++|+.+.|.++++++.+++ +.++.+|++++++++++|++.++||+++|++|
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g 79 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPDIAARYGVMSLPTVIFFKDG 79 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSCEEEEEETT
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHHHHHhCCccccCEEEEEECC
Confidence 46789999999998889999999999999999999999999999985 99999999999999999999999999999999
Q ss_pred eEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 138 VRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 138 ~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
+.+.++.|..+.+++.+++.+.++
T Consensus 80 ~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 80 EPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHT
T ss_pred eEhhhccCCCCHHHHHHHHHHHhc
Confidence 888999999999999999998764
No 39
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.88 E-value=4e-22 Score=149.85 Aligned_cols=110 Identities=25% Similarity=0.424 Sum_probs=99.9
Q ss_pred CCCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcccHHHHHhCCCccccEEEE
Q 021976 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (304)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (304)
.+.+..+++++|++.+++ .++|+|||+||++|+++.|.++++++.+++ ++.++.||++++++++++|+|.++||+++
T Consensus 6 ~~~v~~l~~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 83 (126)
T 1x5e_A 6 SGNVRVITDENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYH 83 (126)
T ss_dssp CCSEEECCTTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCccEEecHHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEEEE
Confidence 367999999999988754 399999999999999999999999999986 89999999999999999999999999999
Q ss_pred EeCCeEEEEeeCCCCHHHHHHHHHHHhCCCceec
Q 021976 134 FVAGVRQFQFFGERTRDVISAWVREKMTLGTYSI 167 (304)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~l 167 (304)
|++|+ +.++.|..+.+++.+|+.+.+...+..+
T Consensus 84 ~~~G~-~~~~~G~~~~~~l~~~l~~~~~~~~~~~ 116 (126)
T 1x5e_A 84 CKDGE-FRRYQGPRTKKDFINFISDKEWKSIEPV 116 (126)
T ss_dssp EETTE-EEECCSCCCHHHHHHHHHTCGGGGSCEE
T ss_pred EeCCe-EEEeecCCCHHHHHHHHHHHhhccCCCc
Confidence 99996 6899999999999999999887665554
No 40
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.88 E-value=1.7e-22 Score=165.52 Aligned_cols=115 Identities=19% Similarity=0.414 Sum_probs=108.2
Q ss_pred cCCCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEE
Q 021976 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (304)
Q Consensus 54 ~~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (304)
.+..+..+++++|+..+.++++++|+|||+||++|+.+.|.|+++++++++.+.++.||++++++++++|+|.++||+++
T Consensus 95 ~~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 174 (210)
T 3apq_A 95 DDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFI 174 (210)
T ss_dssp TCTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCcCCeEEE
Confidence 45678999999999999889999999999999999999999999999998789999999999999999999999999999
Q ss_pred EeCCeEEEEeeCCCCHHHHHHHHHHHhCCCceecC
Q 021976 134 FVAGVRQFQFFGERTRDVISAWVREKMTLGTYSIT 168 (304)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~l~ 168 (304)
|++|+.+.++.|..+.+.|.+|+.+.+++.+.+++
T Consensus 175 ~~~G~~~~~~~G~~~~~~l~~~i~~~l~~~~~~i~ 209 (210)
T 3apq_A 175 FRSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELS 209 (210)
T ss_dssp ECTTSCCEECCSCCCHHHHHHHHHHHHHCCSSCC-
T ss_pred EECCCceeEecCCCCHHHHHHHHHHhCcccceecC
Confidence 99998899999999999999999999998888775
No 41
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.88 E-value=2.8e-22 Score=151.17 Aligned_cols=105 Identities=21% Similarity=0.405 Sum_probs=98.4
Q ss_pred CCcEEcChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEE
Q 021976 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (304)
+.+..++.++|++.+ +++++++|.||++||++|+++.|.++++++++++++.++.||++++++++++|+|.++||+++|
T Consensus 22 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 101 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 101 (128)
T ss_dssp CCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSSSEEEEE
T ss_pred cccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEEE
Confidence 468999999999655 7789999999999999999999999999999987899999999999999999999999999999
Q ss_pred eCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 135 VAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
++|+.+.++.|..+.+++.+++++.+
T Consensus 102 ~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 102 KNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred eCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 99998999999999999999998875
No 42
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.88 E-value=8.1e-22 Score=144.34 Aligned_cols=103 Identities=24% Similarity=0.356 Sum_probs=94.8
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEe
Q 021976 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (304)
......+.++|++.+.++++++|+|||+||++|+++.|.+++++++++ ++.++.||++++++++++|+|.++||+++|+
T Consensus 7 ~~~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 85 (109)
T 3f3q_A 7 MVTQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-QADFYKLDVDELGDVAQKNEVSAMPTLLLFK 85 (109)
T ss_dssp CCEECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred cccCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCHHHHHHcCCCccCEEEEEE
Confidence 344566789999999999999999999999999999999999999997 5999999999999999999999999999999
Q ss_pred CCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 136 AGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+|+.+.++.|. +.+++.+++.+++
T Consensus 86 ~G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 86 NGKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp TTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred CCEEEEEEeCC-CHHHHHHHHHhhC
Confidence 99999999998 7799999998753
No 43
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.88 E-value=5.5e-22 Score=144.50 Aligned_cols=104 Identities=23% Similarity=0.383 Sum_probs=97.0
Q ss_pred CcEEcChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEe
Q 021976 57 DVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (304)
Q Consensus 57 ~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (304)
.+..+++++|++.+ +++++++|.||++||++|+++.|.++++++.+++++.++.+|++++++++++|||.++||+++++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFK 81 (107)
T ss_dssp CCEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSCEEEEES
T ss_pred ccEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCCEEEEEe
Confidence 36789999999866 67899999999999999999999999999999878999999999999999999999999999999
Q ss_pred CCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 136 AGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+|+.+.++.|..+.+++.+++.+.+
T Consensus 82 ~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 82 GGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp SSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred CCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9988999999999999999998765
No 44
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.88 E-value=8.9e-23 Score=148.39 Aligned_cols=98 Identities=9% Similarity=0.116 Sum_probs=80.9
Q ss_pred ChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEeCCeEEE
Q 021976 62 NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQF 141 (304)
Q Consensus 62 ~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~ 141 (304)
+.++|++.++++++++|+|||+||++|+.+.|.+++++++++ ++.++.||++++++++++|+|.++||+++|++|+.+.
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~ 85 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKEIL 85 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC---------CCCCEEEEEETTEEEE
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeEEE
Confidence 456777777889999999999999999999999999999996 7999999999999999999999999999999999999
Q ss_pred EeeCCCCHHHHHHHHHHHh
Q 021976 142 QFFGERTRDVISAWVREKM 160 (304)
Q Consensus 142 ~~~g~~~~~~l~~~i~~~~ 160 (304)
++.|..+.+++.+++++++
T Consensus 86 ~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 86 RESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEESSCCHHHHHHHHHTTC
T ss_pred EEeCCcCHHHHHHHHHHhh
Confidence 9999999999999998764
No 45
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.88 E-value=7.1e-22 Score=151.31 Aligned_cols=131 Identities=21% Similarity=0.251 Sum_probs=84.8
Q ss_pred ccccccCchhhhcccCCCCCCCCCccCCCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEE
Q 021976 29 HEDLKAEPDELELTNLNNNHTWPLLYAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADL 108 (304)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~ 108 (304)
|...+..+.........+..+.... +.+.++++++|++.+.+++.++|+||++||++|+.+.|.++++++++++++.|
T Consensus 8 ~~~~~~~~~~r~~~~~~~~~c~~~~--~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~ 85 (140)
T 1v98_A 8 CGAKNRLGTPPPGQVPVCGACKTPL--PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRLKV 85 (140)
T ss_dssp -------------------------------------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEE
T ss_pred ccccccCCcccccCCcccccccCCC--CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCceEE
Confidence 3344444444443333334333222 67889999999988755444999999999999999999999999999878999
Q ss_pred EEEeCcccHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 109 VMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 109 ~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
+.||++++++++++|+|.++||+++|++|+.+.++.|..+.+.+.+|+.+.++
T Consensus 86 ~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 86 VKVNVDEHPGLAARYGVRSVPTLVLFRRGAPVATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp EEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred EEEECCCCHHHHHHCCCCccCEEEEEeCCcEEEEEeCCCCHHHHHHHHHHHHc
Confidence 99999999999999999999999999999989999999999999999998875
No 46
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.88 E-value=7e-22 Score=149.24 Aligned_cols=107 Identities=28% Similarity=0.471 Sum_probs=98.4
Q ss_pred CCCcEEcChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEE
Q 021976 55 AKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (304)
Q Consensus 55 ~~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (304)
.+.+..++.++|++.+ .++++++|+||++||++|+++.|.++++++++++.+.++.||++++++++++|+|.++||+++
T Consensus 16 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 95 (130)
T 2dml_A 16 SDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTIKI 95 (130)
T ss_dssp TSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCSSSEEEE
T ss_pred CCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCccCEEEE
Confidence 4679999999999865 678999999999999999999999999999998789999999999999999999999999999
Q ss_pred EeCCeE-EEEeeCCCCHHHHHHHHHHHhC
Q 021976 134 FVAGVR-QFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 134 ~~~g~~-~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
|++|+. +.++.|..+.+++.+|+.+.+.
T Consensus 96 ~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 96 FGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp ESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred EeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 996654 7899999999999999988763
No 47
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.88 E-value=1.6e-21 Score=141.37 Aligned_cols=103 Identities=26% Similarity=0.462 Sum_probs=95.9
Q ss_pred cEEcChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEeC
Q 021976 58 VVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVA 136 (304)
Q Consensus 58 v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 136 (304)
|.++++++|++.+ .++++++|.||++||++|+.+.|.++++++++++++.++.+|++++++++++|+|.++||++++++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 81 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKN 81 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccEEEEEeC
Confidence 5778999999866 567899999999999999999999999999998789999999999999999999999999999999
Q ss_pred CeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 137 GVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 137 g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
|+.+.++.|..+.+.+.+++.+.+
T Consensus 82 g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 82 GERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp TEEEEEEEECCCHHHHHHHHHHHC
T ss_pred CeEEEEEecCCCHHHHHHHHHhhC
Confidence 999999999999999999998753
No 48
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.88 E-value=1.1e-22 Score=151.22 Aligned_cols=109 Identities=37% Similarity=0.623 Sum_probs=101.3
Q ss_pred CCCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC---CcEEEEEeCcccHHHHHhCCCccccEE
Q 021976 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG---EADLVMVDAYLEKDLAKEYNILAYPTL 131 (304)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 131 (304)
++.+..++.++|++.+.++++++|.||++||++|+++.|.++++++.+++ .+.++.+|++++++++++|+|.++||+
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 85 (120)
T 1mek_A 6 EDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTI 85 (120)
T ss_dssp ETTEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSEE
T ss_pred CCCcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccEE
Confidence 46789999999999998899999999999999999999999999999874 699999999999999999999999999
Q ss_pred EEEeCCeEE--EEeeCCCCHHHHHHHHHHHhCCC
Q 021976 132 YLFVAGVRQ--FQFFGERTRDVISAWVREKMTLG 163 (304)
Q Consensus 132 ~~~~~g~~~--~~~~g~~~~~~l~~~i~~~~~~~ 163 (304)
++|++|+.+ .++.|..+.+.+.+|+.++++++
T Consensus 86 ~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 86 KFFRNGDTASPKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp EEEESSCSSSCEECCCCSSHHHHHHHHHTTSCCC
T ss_pred EEEeCCCcCCcccccCccCHHHHHHHHHhccCCC
Confidence 999999766 89999999999999999988765
No 49
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.88 E-value=1.6e-21 Score=142.20 Aligned_cols=102 Identities=23% Similarity=0.286 Sum_probs=91.3
Q ss_pred cEEc-ChhcHHHHh--cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEE
Q 021976 58 VVSL-NGKNFSEFM--GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (304)
Q Consensus 58 v~~l-~~~~~~~~~--~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (304)
+..+ +.++|++.+ .++++++|+|||+||++|+++.|.+++++++++ ++.++.+|++++++++++|+|.++||+++|
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP-QAVFLEVDVHQCQGTAATNNISATPTFQFF 81 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSSSEEEEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC-CcEEEEEECccCHHHHHhcCCCcccEEEEE
Confidence 3444 668999888 578999999999999999999999999999995 799999999999999999999999999999
Q ss_pred eCCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 135 VAGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
++|+.+.++.|.. .+++.+++.+.++
T Consensus 82 ~~G~~~~~~~G~~-~~~l~~~l~~~lg 107 (107)
T 1gh2_A 82 RNKVRIDQYQGAD-AVGLEEKIKQHLE 107 (107)
T ss_dssp ETTEEEEEEESSC-HHHHHHHHHHHHC
T ss_pred ECCeEEEEEeCCC-HHHHHHHHHHhcC
Confidence 9999899999954 4569999988763
No 50
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.87 E-value=1.5e-21 Score=143.38 Aligned_cols=104 Identities=24% Similarity=0.416 Sum_probs=95.8
Q ss_pred CcEEc-ChhcHHHHhcC----CCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEE
Q 021976 57 DVVSL-NGKNFSEFMGK----NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTL 131 (304)
Q Consensus 57 ~v~~l-~~~~~~~~~~~----~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 131 (304)
.+..+ +.++|++.+.+ +++++|.||++||++|+.+.|.++++++++++++.++.||++++++++++|+|.++||+
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 82 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTF 82 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBSSEE
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcccEE
Confidence 56777 56899988865 89999999999999999999999999999987899999999999999999999999999
Q ss_pred EEEeCCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 132 YLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
+++++|+.+.++.|. +.+++.+++.+++.
T Consensus 83 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 83 HVYKDGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp EEEETTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred EEEECCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 999999989999998 99999999998763
No 51
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.87 E-value=2e-21 Score=142.59 Aligned_cols=104 Identities=21% Similarity=0.331 Sum_probs=95.3
Q ss_pred CCCcEEcChhcHHHHhc--CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCc-ccHHHHHhCCCccccEE
Q 021976 55 AKDVVSLNGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-LEKDLAKEYNILAYPTL 131 (304)
Q Consensus 55 ~~~v~~l~~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~-~~~~~~~~~~v~~~Pt~ 131 (304)
.+.+..+++++|++.+. ++++++|.||++||++|+++.|.++++++.++ ++.++.||++ ++++++++|+|.++||+
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~~~~~~~~~v~~~Pt~ 82 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL-DVIFLKLDCNQENKTLAKELGIRVVPTF 82 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSTTHHHHHHHCCSBSSEE
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC-CeEEEEEecCcchHHHHHHcCCCeeeEE
Confidence 36789999999999885 58999999999999999999999999999998 5999999998 78999999999999999
Q ss_pred EEEeCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 132 YLFVAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+++++|+.+.++.|.. .+++.+++.+.+
T Consensus 83 ~~~~~G~~~~~~~G~~-~~~l~~~l~~~~ 110 (111)
T 2pu9_C 83 KILKENSVVGEVTGAK-YDKLLEAIQAAR 110 (111)
T ss_dssp EEESSSSEEEEEESSC-HHHHHHHHHHHH
T ss_pred EEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 9999998888999984 899999998764
No 52
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.87 E-value=8.8e-22 Score=154.72 Aligned_cols=111 Identities=11% Similarity=0.212 Sum_probs=97.6
Q ss_pred CCCcEEcChhcHHHHhcC--CCcEEEEEEc-------CCChhhhhhHHHHHHHHHHhh-----CCcEEEEEeCcccHHHH
Q 021976 55 AKDVVSLNGKNFSEFMGK--NRNVMVMFYA-------NWCYWSKKLAPEFAAAAKMLK-----GEADLVMVDAYLEKDLA 120 (304)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~--~~~~lv~f~a-------~wC~~C~~~~~~~~~~~~~~~-----~~~~~~~vd~~~~~~~~ 120 (304)
.+.++.+|+++|++.+.+ +.+++|.||| +||++|+.+.|+|+++|+++. +++.|++||++++++++
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la 96 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLV 96 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHH
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHH
Confidence 367999999999998854 4579999999 499999999999999999998 78999999999999999
Q ss_pred HhCCCccccEEEEEeCCeEE------------EEe---eC-CCCHHHHHHHHHHHhCCCce
Q 021976 121 KEYNILAYPTLYLFVAGVRQ------------FQF---FG-ERTRDVISAWVREKMTLGTY 165 (304)
Q Consensus 121 ~~~~v~~~Pt~~~~~~g~~~------------~~~---~g-~~~~~~l~~~i~~~~~~~~~ 165 (304)
++|||+++||+++|++|... ..| .| .++++.|.+||.+.++..+.
T Consensus 97 ~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~ 157 (178)
T 3ga4_A 97 KDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISIT 157 (178)
T ss_dssp HHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCC
T ss_pred HHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCcc
Confidence 99999999999999977422 355 35 89999999999999986653
No 53
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.87 E-value=2.3e-21 Score=145.46 Aligned_cols=103 Identities=18% Similarity=0.311 Sum_probs=96.3
Q ss_pred CcEEcCh-hcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEe
Q 021976 57 DVVSLNG-KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (304)
Q Consensus 57 ~v~~l~~-~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (304)
.+..+++ ++|++.+.++++++|.|||+||++|+++.|.++++++.++ ++.++.||++++++++++|+|.++||+++|+
T Consensus 20 mv~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i~~ 98 (125)
T 1r26_A 20 SVVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADNNSEIVSKCRVLQLPTFIIAR 98 (125)
T ss_dssp CCEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred ceEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCHHHHHHcCCCcccEEEEEe
Confidence 4788998 9999999889999999999999999999999999999996 7999999999999999999999999999999
Q ss_pred CCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 136 AGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
+|+.+.++.| .+.++|.++|.+.+.
T Consensus 99 ~G~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 99 SGKMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp TTEEEEEEES-SCHHHHHHHHHHHHH
T ss_pred CCeEEEEEeC-CCHHHHHHHHHHHhc
Confidence 9998999999 688999999988763
No 54
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.87 E-value=2.1e-21 Score=147.97 Aligned_cols=107 Identities=23% Similarity=0.366 Sum_probs=97.9
Q ss_pred CCcEEcChhcHHHHhc------------CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhC
Q 021976 56 KDVVSLNGKNFSEFMG------------KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEY 123 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~~------------~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~ 123 (304)
..++.+++++|.+.+. ++++++|+||++||++|+++.|.++++++++++++.++.||++++++++++|
T Consensus 9 ~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~ 88 (136)
T 2l5l_A 9 GKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAF 88 (136)
T ss_dssp TSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHT
T ss_pred CceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHc
Confidence 5788999999998774 4689999999999999999999999999999878999999999999999999
Q ss_pred CCccccEEEEE-eCCeEEEEeeCCCCHHHHHHHHHHHhCCC
Q 021976 124 NILAYPTLYLF-VAGVRQFQFFGERTRDVISAWVREKMTLG 163 (304)
Q Consensus 124 ~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (304)
+|.++||+++| ++|+.+ .+.|..+.+.|.++|.+.++..
T Consensus 89 ~v~~~Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~~~~~ 128 (136)
T 2l5l_A 89 GIRSIPSILFIPMEGKPE-MAQGAMPKASFKKAIDEFLLKK 128 (136)
T ss_dssp TCCSSCEEEEECSSSCCE-EEESCCCHHHHHHHHHHHHTSC
T ss_pred CCCCCCEEEEECCCCcEE-EEeCCCCHHHHHHHHHHHhhcc
Confidence 99999999999 588665 8899999999999999987543
No 55
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.87 E-value=1.4e-21 Score=145.59 Aligned_cols=106 Identities=20% Similarity=0.386 Sum_probs=98.1
Q ss_pred CCCcEEcChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEE
Q 021976 55 AKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (304)
Q Consensus 55 ~~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (304)
...+..++.++|.+.+ .++++++|.||++||++|+.+.|.++++++++++++.++.||++++++++++|+|.++||+++
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 90 (121)
T 2i1u_A 11 KSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLIL 90 (121)
T ss_dssp -CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcCCEEEE
Confidence 4678999999998655 678999999999999999999999999999998789999999999999999999999999999
Q ss_pred EeCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 134 FVAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
|++|+.+.++.|..+.+.+.+++.+.+
T Consensus 91 ~~~g~~~~~~~G~~~~~~l~~~l~~~l 117 (121)
T 2i1u_A 91 FKDGQPVKRIVGAKGKAALLRELSDVV 117 (121)
T ss_dssp EETTEEEEEEESCCCHHHHHHHTCSCC
T ss_pred EECCEEEEEecCCCCHHHHHHHHHHHH
Confidence 999999999999999999999997665
No 56
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.87 E-value=1.8e-21 Score=143.19 Aligned_cols=104 Identities=19% Similarity=0.371 Sum_probs=96.8
Q ss_pred CCCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEE
Q 021976 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (304)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (304)
.+....++.++|++.++++++++|+||++||++|+++.|.+++++++++ ++.++.||++++++++++|+|.++||++++
T Consensus 8 ~~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 86 (112)
T 1syr_A 8 HMVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDEVSEVTEKENITSMPTFKVY 86 (112)
T ss_dssp -CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTTHHHHHHTTCCSSSEEEEE
T ss_pred eeEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCCHHHHHHcCCCcccEEEEE
Confidence 3567889999999999889999999999999999999999999999987 699999999999999999999999999999
Q ss_pred eCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 135 VAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
++|+.+.++.|. +.+++.+++.+.+
T Consensus 87 ~~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 87 KNGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp ETTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred ECCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 999988999999 9999999998654
No 57
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.87 E-value=1.4e-21 Score=149.70 Aligned_cols=107 Identities=21% Similarity=0.416 Sum_probs=96.1
Q ss_pred cCCCcEEcChhcHHHHhc------------CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHH
Q 021976 54 YAKDVVSLNGKNFSEFMG------------KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAK 121 (304)
Q Consensus 54 ~~~~v~~l~~~~~~~~~~------------~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~ 121 (304)
....+..++.++|...+. ++++++|+||++||++|+.+.|.++++++.+++++.++.||+++++++++
T Consensus 20 ~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 99 (141)
T 3hxs_A 20 PQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELAR 99 (141)
T ss_dssp ---CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHH
T ss_pred CCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHHH
Confidence 346899999999998884 37999999999999999999999999999999889999999999999999
Q ss_pred hCCCccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 122 EYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 122 ~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
+|+|.++||+++|+ +|+ +.++.|..+.+.|.++|.+++.
T Consensus 100 ~~~v~~~Pt~~~~~~~g~-~~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 100 DFGIQSIPTIWFVPMKGE-PQVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp HTTCCSSSEEEEECSSSC-CEEEESCCCHHHHHHHHHHTTC
T ss_pred HcCCCCcCEEEEEeCCCC-EEEEeCCCCHHHHHHHHHHHHc
Confidence 99999999999996 664 4589999999999999998764
No 58
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.87 E-value=6.4e-22 Score=147.77 Aligned_cols=108 Identities=27% Similarity=0.430 Sum_probs=96.7
Q ss_pred CCcEEcChhcHHH-HhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEE
Q 021976 56 KDVVSLNGKNFSE-FMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (304)
Q Consensus 56 ~~v~~l~~~~~~~-~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (304)
+.+..+++++|.+ ++.++++++|.||++||++|+++.|.++++++.+++++.++.||++++++++++|+|.++||+++|
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 82 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLY 82 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccceEEEE
Confidence 5689999999964 557889999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCeEEEEeeCC----CCHHHHHHHHHHHhCCC
Q 021976 135 VAGVRQFQFFGE----RTRDVISAWVREKMTLG 163 (304)
Q Consensus 135 ~~g~~~~~~~g~----~~~~~l~~~i~~~~~~~ 163 (304)
++|+.+.++.|. .+.+.+.+|+.+.+...
T Consensus 83 ~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 115 (122)
T 3aps_A 83 QYERAKKSIWEEQINSRDAKTIAALIYGKLETL 115 (122)
T ss_dssp EEEGGGTEEEEEEECCSCHHHHHHHHHHHHHCC
T ss_pred eCCCccceeeccccCcCCHHHHHHHHHHHHHhh
Confidence 865456677775 89999999999887543
No 59
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.87 E-value=2e-21 Score=166.69 Aligned_cols=107 Identities=22% Similarity=0.405 Sum_probs=101.1
Q ss_pred CCCcEEcChhcHHHHhcC--CCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEE
Q 021976 55 AKDVVSLNGKNFSEFMGK--NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (304)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~--~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (304)
.+.|+++|.++|++.+.. +++++|+|||+||++|+.+.|.|+++++++++++.|+.||++++++++++|+|.++||++
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 85 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVY 85 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSSEEE
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCCeEE
Confidence 357999999999998854 799999999999999999999999999999988999999999999999999999999999
Q ss_pred EEeCCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 133 LFVAGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
+|++|+.+.++.|..+.+.+.+++.+.++
T Consensus 86 ~~~~G~~~~~~~g~~~~~~l~~~l~~~lp 114 (287)
T 3qou_A 86 LFQNGQPVDGFQGPQPEEAIRALLDXVLP 114 (287)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHSC
T ss_pred EEECCEEEEEeeCCCCHHHHHHHHHHHcC
Confidence 99999999999999999999999998874
No 60
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.87 E-value=3e-21 Score=141.82 Aligned_cols=103 Identities=16% Similarity=0.294 Sum_probs=90.4
Q ss_pred cEEcCh-hcHHHHhcC---CCcEEEEEEcCCChhhhhhHHHHHHHHHHhh-CCcEEEEEeCcccHHHHHhCCCccccEEE
Q 021976 58 VVSLNG-KNFSEFMGK---NRNVMVMFYANWCYWSKKLAPEFAAAAKMLK-GEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (304)
Q Consensus 58 v~~l~~-~~~~~~~~~---~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~-~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (304)
+..+++ ++|++.+.+ +++++|.|||+||++|+.+.|.+++++++++ .++.++.+|++++++++++|+|.++||++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 81 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFI 81 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEEE
Confidence 567777 999998865 8999999999999999999999999999963 37999999999999999999999999999
Q ss_pred EEeCCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 133 LFVAGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
+|++|+.+.++.|.. .+++.+++.+.++
T Consensus 82 ~~~~G~~~~~~~G~~-~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 82 IIHKGTILKELSGAD-PKEYVSLLEDCKN 109 (112)
T ss_dssp EEETTEEEEEECSCC-HHHHHHHHHHHHH
T ss_pred EEECCEEEEEecCCC-HHHHHHHHHHHHh
Confidence 999999999999984 5569999988763
No 61
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.87 E-value=1.2e-20 Score=157.86 Aligned_cols=189 Identities=12% Similarity=0.095 Sum_probs=145.2
Q ss_pred hcHHHHhcC-CCcEEEEEEcCC--ChhhhhhHHHHHHHHHHhh---CC--cEEEEEeCcccHHHHHhCCCccccEEEEEe
Q 021976 64 KNFSEFMGK-NRNVMVMFYANW--CYWSKKLAPEFAAAAKMLK---GE--ADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (304)
Q Consensus 64 ~~~~~~~~~-~~~~lv~f~a~w--C~~C~~~~~~~~~~~~~~~---~~--~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (304)
+++.+.+++ .++++|.||++| |++|+.+.|.++++++.++ ++ +.|+.+|++++++++++|||.++||+.+|
T Consensus 15 ~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~- 93 (243)
T 2hls_A 15 RELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFL- 93 (243)
T ss_dssp HHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEET-
T ss_pred HHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEE-
Confidence 556666643 578999999999 9999999999999999853 22 99999999999999999999999999999
Q ss_pred CCeEEEEeeCCCCHHHHHHHHHHHhC--CCceecCCHHHHHHhhcc-CCeEEEEEecCCCCccHHH---HHHHhc-cC--
Q 021976 136 AGVRQFQFFGERTRDVISAWVREKMT--LGTYSITTTDEAERILTV-ESKLVLGFLHDLEGMESEE---LAAASK-LH-- 206 (304)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~~--~~~~~l~~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~---~~~~a~-~~-- 206 (304)
+| ..+|.|..+.+.+..|+...+. .....+ +.+..+.+.+. .+.+++.|+++||+++... +..++. +.
T Consensus 94 ~g--~~~~~G~~~~~~l~~fv~~~l~~~~~~~~l-~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~ 170 (243)
T 2hls_A 94 GG--EVRWTGIPAGEEIRALVEVIMRLSEDESGL-EDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQ 170 (243)
T ss_dssp TT--TEEEESCCCTTHHHHHHHHHHHHHTTCCCC-CHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHT
T ss_pred CC--ceeEcCCCcHHHHHHHHHHHHhccCCCCCC-CHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccc
Confidence 66 7889998888889998887652 222223 44445544432 4567888999999985444 444442 31
Q ss_pred --CceeEEEe---cCHHHHhhcCCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhcCC
Q 021976 207 --SDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (304)
Q Consensus 207 --~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 264 (304)
.++.+..+ .+++++++|++.+ +|++++ ++ + ..|.|..+.++|.+||.+..
T Consensus 171 ~~~~v~~~~vd~~~~~~~~~~~~V~~---vPt~~i--~G--~-~~~~G~~~~~~l~~~l~~~~ 225 (243)
T 2hls_A 171 GNPVILSEAVEAYENPDIADKYGVMS---VPSIAI--NG--Y-LVFVGVPYEEDFLDYVKSAA 225 (243)
T ss_dssp TCCCEEEEEEETTTCHHHHHHTTCCS---SSEEEE--TT--E-EEEESCCCHHHHHHHHHHHH
T ss_pred cCCcEEEEEEECccCHHHHHHcCCee---eCeEEE--CC--E-EEEeCCCCHHHHHHHHHHHh
Confidence 56766654 6788999999996 999887 22 3 34999999999999998753
No 62
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.87 E-value=4.2e-21 Score=139.42 Aligned_cols=101 Identities=22% Similarity=0.418 Sum_probs=93.1
Q ss_pred cEEcCh-hcHHHHhc--CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEE
Q 021976 58 VVSLNG-KNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (304)
Q Consensus 58 v~~l~~-~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (304)
+..+++ ++|++.+. ++++++|.||++||++|+++.|.++++++.+++++.++.+|++++++++++|+|.++||++++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFL 81 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccEEEEE
Confidence 456777 89998886 789999999999999999999999999999977899999999999999999999999999999
Q ss_pred eCCeEEEEeeCCCCHHHHHHHHHHH
Q 021976 135 VAGVRQFQFFGERTRDVISAWVREK 159 (304)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~ 159 (304)
++|+.+.++.| .+.+++.+++++.
T Consensus 82 ~~G~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 82 KNGVKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp ETTEEEEEEES-CCHHHHHHHHHHT
T ss_pred cCCcEEEEEcC-CCHHHHHHHHHHh
Confidence 99999999999 7889999999865
No 63
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.87 E-value=4.6e-21 Score=143.10 Aligned_cols=104 Identities=22% Similarity=0.322 Sum_probs=96.2
Q ss_pred CCcEEcChhcHHHHhc----CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEE
Q 021976 56 KDVVSLNGKNFSEFMG----KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTL 131 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~~----~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 131 (304)
..+..++.++|++.+. ++++++|.||++||++|+++.|.++++++++++ +.++.||++++++++++|+|.++||+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~ 91 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELKPIAEQFSVEAMPTF 91 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCHHHHHHcCCCcccEE
Confidence 4667789999998874 589999999999999999999999999999985 99999999999999999999999999
Q ss_pred EEEeCCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 132 YLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
+++++|+.+.++.|.. .+++.+++.++++
T Consensus 92 ~~~~~G~~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 92 LFMKEGDVKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp EEEETTEEEEEEESSC-HHHHHHHHHHHHS
T ss_pred EEEeCCEEEEEEeCcC-HHHHHHHHHHHhc
Confidence 9999999999999998 9999999998874
No 64
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.86 E-value=4.9e-21 Score=138.87 Aligned_cols=97 Identities=25% Similarity=0.389 Sum_probs=90.7
Q ss_pred ChhcHHHHhc--CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEeCCeE
Q 021976 62 NGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVR 139 (304)
Q Consensus 62 ~~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 139 (304)
+.++|++.+. ++++++|.||++||++|+++.|.+++++++++ ++.++.+|++++++++++|+|.++||+++|++|+.
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 85 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS-NVIFLEVDVDDCQDVASESEVKSMPTFQFFKKGQK 85 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHST-TSEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEE
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHcc-CeEEEEEEhhhhHHHHHHcCCCcCcEEEEEECCeE
Confidence 5678888886 78999999999999999999999999999998 49999999999999999999999999999999999
Q ss_pred EEEeeCCCCHHHHHHHHHHHh
Q 021976 140 QFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 140 ~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+.++.|. +.+++.+++.+++
T Consensus 86 ~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 86 VGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp EEEEESS-CHHHHHHHHHHHC
T ss_pred EEEEeCC-CHHHHHHHHHHhC
Confidence 9999999 9999999998753
No 65
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.86 E-value=9e-22 Score=148.37 Aligned_cols=98 Identities=17% Similarity=0.242 Sum_probs=89.7
Q ss_pred cChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEeCCeEE
Q 021976 61 LNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQ 140 (304)
Q Consensus 61 l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 140 (304)
.+++.++....++++++|+|||+||++|+++.|.++++++++++++.++.||++++++++++|+|.++||++++++|+.+
T Consensus 30 ~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~ 109 (128)
T 3ul3_B 30 NGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTML 109 (128)
T ss_dssp CCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEE
Confidence 34444555567889999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred EEeeCCCCHHHHHHHHHH
Q 021976 141 FQFFGERTRDVISAWVRE 158 (304)
Q Consensus 141 ~~~~g~~~~~~l~~~i~~ 158 (304)
.++.|..+.+++.+++++
T Consensus 110 ~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 110 ARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EEESSCCCHHHHHHHHTT
T ss_pred EEecCCCCHHHHHHHHHh
Confidence 999999999999999865
No 66
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.86 E-value=4.6e-21 Score=158.31 Aligned_cols=110 Identities=20% Similarity=0.380 Sum_probs=102.6
Q ss_pred cCCCcEEcChhcHHHH-hcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEE
Q 021976 54 YAKDVVSLNGKNFSEF-MGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (304)
Q Consensus 54 ~~~~v~~l~~~~~~~~-~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (304)
....+..+|+++|++. ++++++++|+|||+||++|+.+.|.|+++++++++++.++.||++++++++++|+|.++||++
T Consensus 10 ~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~ 89 (222)
T 3dxb_A 10 MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLL 89 (222)
T ss_dssp CSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSBSEEE
T ss_pred CCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcCCEEE
Confidence 3468899999999975 578899999999999999999999999999999988999999999999999999999999999
Q ss_pred EEeCCeEEEEeeCCCCHHHHHHHHHHHhCCC
Q 021976 133 LFVAGVRQFQFFGERTRDVISAWVREKMTLG 163 (304)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (304)
+|++|+.+.++.|..+.+.+.+++.+.+...
T Consensus 90 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 90 LFKNGEVAATKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHSCCS
T ss_pred EEECCeEEEEeccccChHHHHHHHHhhcccc
Confidence 9999999999999999999999999998543
No 67
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.86 E-value=2.7e-21 Score=149.54 Aligned_cols=100 Identities=14% Similarity=0.161 Sum_probs=92.6
Q ss_pred cChhcHHHHh--cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEeCCe
Q 021976 61 LNGKNFSEFM--GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGV 138 (304)
Q Consensus 61 l~~~~~~~~~--~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~ 138 (304)
.+.++|++.+ .++++++|+|||+||++|+.+.|.++++++++++.+.++.||++++++++++|+|.++||++++++|+
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~ 88 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQ 88 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTE
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeEEEEECCe
Confidence 4678899887 56899999999999999999999999999999877999999999999999999999999999999998
Q ss_pred EE---------EEeeC-CCCHHHHHHHHHHHh
Q 021976 139 RQ---------FQFFG-ERTRDVISAWVREKM 160 (304)
Q Consensus 139 ~~---------~~~~g-~~~~~~l~~~i~~~~ 160 (304)
.+ .++.| ..+.+++.+++++..
T Consensus 89 ~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 89 HMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp EEEEECSSSCCSCEESCCSSHHHHHHHHHHHH
T ss_pred EEEeecCCCCCCeEeeecCCHHHHHHHHHHHH
Confidence 88 88999 899999999998764
No 68
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.86 E-value=1.7e-21 Score=148.25 Aligned_cols=106 Identities=14% Similarity=0.192 Sum_probs=96.4
Q ss_pred CCCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeC---------cccHHHHHhCCC
Q 021976 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA---------YLEKDLAKEYNI 125 (304)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~---------~~~~~~~~~~~v 125 (304)
++.+..++.++|++.+.+ +++|+|||+||++|+++.|.+++++++++ +.++.||+ +++++++++|+|
T Consensus 15 ~~~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~v 90 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAGV 90 (135)
T ss_dssp TTEEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHTC
T ss_pred cCceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcCC
Confidence 357889999999999966 99999999999999999999999999886 89999999 889999999999
Q ss_pred ccccEEEEEeCCeEEEEeeCCCCHHHHHHHHHHHhCCCc
Q 021976 126 LAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTLGT 164 (304)
Q Consensus 126 ~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~ 164 (304)
.++||+++|++|+.+.++.|..+.+.+.++++++++++-
T Consensus 91 ~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~~~~~ 129 (135)
T 3emx_A 91 EGTPTLVFYKEGRIVDKLVGATPWSLKVEKAREIYGGEG 129 (135)
T ss_dssp CSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC----
T ss_pred ceeCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHhCCCc
Confidence 999999999999999999999999999999999886543
No 69
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.86 E-value=5.6e-22 Score=148.41 Aligned_cols=105 Identities=21% Similarity=0.402 Sum_probs=91.6
Q ss_pred CCcEEcChhcHHHHh-cCCCcEEEEEEcCCCh--------------hhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHH
Q 021976 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCY--------------WSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLA 120 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~--------------~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~ 120 (304)
+.+.++++++|++.+ +++++++|+|||+||+ +|+++.|.++++++++++++.++.||++++++++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~ 82 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 82 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTTG
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHH
Confidence 468899999998655 7789999999999999 9999999999999999878999999999999999
Q ss_pred HhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 121 KEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 121 ~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
++|||.++||+++|++|+.+.++.|..+.+++.+++.+.+
T Consensus 83 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 83 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp GGGTCCBSSEEEEEESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred HHcCCCccCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999998754
No 70
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.86 E-value=9.3e-21 Score=141.86 Aligned_cols=103 Identities=20% Similarity=0.327 Sum_probs=94.8
Q ss_pred CCcEEcChhcHHHHhc--CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCc-ccHHHHHhCCCccccEEE
Q 021976 56 KDVVSLNGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-LEKDLAKEYNILAYPTLY 132 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~-~~~~~~~~~~v~~~Pt~~ 132 (304)
..+..+++++|++.+. ++++++|.||++||++|+++.|.+++++++++ ++.++.+|++ ++++++++|+|.++||++
T Consensus 18 ~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~v~~~Pt~~ 96 (124)
T 1faa_A 18 GKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-DVIFLKLDCNQENKTLAKELGIRVVPTFK 96 (124)
T ss_dssp TSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSTTHHHHHHHCCSSSSEEE
T ss_pred CceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-CCEEEEEecCcchHHHHHHcCCCeeeEEE
Confidence 5789999999998885 68999999999999999999999999999998 6999999998 689999999999999999
Q ss_pred EEeCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 133 LFVAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
++++|+.+.++.|.. .+++.+++.+..
T Consensus 97 ~~~~G~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 97 ILKENSVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp EEETTEEEEEEESSC-HHHHHHHHHHHT
T ss_pred EEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 999999999999986 899999998764
No 71
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.86 E-value=5.5e-21 Score=141.64 Aligned_cols=101 Identities=26% Similarity=0.448 Sum_probs=93.2
Q ss_pred CcEEcCh-hcHHHHhc--CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEE
Q 021976 57 DVVSLNG-KNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (304)
Q Consensus 57 ~v~~l~~-~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (304)
.+..+++ ++|++.+. ++++++|.|||+||++|+++.|.++++++++ ++.++.||++++++++++|+|.++||+++
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 91 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLEETARKYNISAMPTFIA 91 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSHHHHHHTTCCSSSEEEE
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccHHHHHHcCCCccceEEE
Confidence 4788888 99998886 7899999999999999999999999999988 79999999999999999999999999999
Q ss_pred EeCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 134 FVAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+++|+.+.++.| .+.+++.+++++++
T Consensus 92 ~~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 92 IKNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred EeCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 999999999999 68899999998753
No 72
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.86 E-value=2.7e-21 Score=141.78 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=93.0
Q ss_pred cEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEeCC
Q 021976 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAG 137 (304)
Q Consensus 58 v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g 137 (304)
+..++.++| +.+.++++++|.||++||++|+.+.|.++++++.++ ++.++.+|++++++++++|+|.++||+++|++|
T Consensus 5 ~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 82 (110)
T 2l6c_A 5 RDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEARPELMKELGFERVPTLVFIRDG 82 (110)
T ss_dssp SBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGGCHHHHHHTTCCSSCEEEEEESS
T ss_pred eecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcCCHHHHHHcCCcccCEEEEEECC
Confidence 455778999 677778999999999999999999999999999887 799999999999999999999999999999999
Q ss_pred eEEEEeeCCCCHHHHHHHHHHHhCC
Q 021976 138 VRQFQFFGERTRDVISAWVREKMTL 162 (304)
Q Consensus 138 ~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (304)
+.+.++.|..+.++|.+++.+..++
T Consensus 83 ~~v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 83 KVAKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp SEEEEEESCCCHHHHHHHHHTC---
T ss_pred EEEEEEcCCCCHHHHHHHHHHHhhh
Confidence 9999999999999999999877643
No 73
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.86 E-value=5.4e-21 Score=141.06 Aligned_cols=100 Identities=22% Similarity=0.390 Sum_probs=90.3
Q ss_pred CcEEcC-hhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEe
Q 021976 57 DVVSLN-GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (304)
Q Consensus 57 ~v~~l~-~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (304)
.+..++ .++|+++++++++++|.||++||++|+++.|.++++++++++ +.++.||++++++++++|+|.++||+++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 91 (114)
T 2oe3_A 13 SITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPDIAKECEVTAMPTFVLGK 91 (114)
T ss_dssp GSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSBSEEEEEE
T ss_pred heeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHCCCCcccEEEEEe
Confidence 344444 466788888899999999999999999999999999999985 999999999999999999999999999999
Q ss_pred CCeEEEEeeCCCCHHHHHHHHHH
Q 021976 136 AGVRQFQFFGERTRDVISAWVRE 158 (304)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~ 158 (304)
+|+.+.++.|.. .+.+.+++++
T Consensus 92 ~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 92 DGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp TTEEEEEEESSC-HHHHHHHHHT
T ss_pred CCeEEEEEeCCC-HHHHHHHHHh
Confidence 999999999988 9999999864
No 74
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.86 E-value=9.7e-21 Score=147.20 Aligned_cols=105 Identities=19% Similarity=0.303 Sum_probs=96.0
Q ss_pred CCcEEcC-hhcHHHHhcC--CCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEE
Q 021976 56 KDVVSLN-GKNFSEFMGK--NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (304)
Q Consensus 56 ~~v~~l~-~~~~~~~~~~--~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (304)
..+..++ .++|++.+.+ +++++|+||++||++|+++.|.+++++++++ ++.|+.||++++++++++|+|.++||++
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 90 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-QVSFVKLEAEGVPEVSEKYEISSVPTFL 90 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSSSEEE
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC-CeEEEEEECCCCHHHHHHcCCCCCCEEE
Confidence 4677776 5899988866 8999999999999999999999999999986 7999999999999999999999999999
Q ss_pred EEeCCeEEEEeeCCCCHHHHHHHHHHHhCC
Q 021976 133 LFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (304)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (304)
+|++|+.+.++.|. +.+++.+++.+.++.
T Consensus 91 ~~~~G~~~~~~~G~-~~~~l~~~i~~~l~~ 119 (153)
T 2wz9_A 91 FFKNSQKIDRLDGA-HAPELTKKVQRHASS 119 (153)
T ss_dssp EEETTEEEEEEESS-CHHHHHHHHHHHSCT
T ss_pred EEECCEEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 99999888899995 778899999999864
No 75
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.86 E-value=1.1e-21 Score=146.24 Aligned_cols=107 Identities=25% Similarity=0.505 Sum_probs=95.1
Q ss_pred cCCCcEEcChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-----CcEEEEEeCcccHHHHHhCCCcc
Q 021976 54 YAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-----EADLVMVDAYLEKDLAKEYNILA 127 (304)
Q Consensus 54 ~~~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-----~~~~~~vd~~~~~~~~~~~~v~~ 127 (304)
..+.+..+++++|++.+ .++++++|+|||+||++|+++.|.|+++++++++ .+.++.||+++++ +++ +|.+
T Consensus 5 ~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~ 81 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQG 81 (121)
T ss_dssp CSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSS
T ss_pred CCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCc
Confidence 45689999999999886 6789999999999999999999999999999986 7999999999876 555 9999
Q ss_pred ccEEEEEeCCeE--EEEeeCCCCHHHHHHHHHHHhCCC
Q 021976 128 YPTLYLFVAGVR--QFQFFGERTRDVISAWVREKMTLG 163 (304)
Q Consensus 128 ~Pt~~~~~~g~~--~~~~~g~~~~~~l~~~i~~~~~~~ 163 (304)
+||+++|++|.. +.++.|..+.++|.+|+.+++...
T Consensus 82 ~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~~ 119 (121)
T 2djj_A 82 FPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKYK 119 (121)
T ss_dssp SSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSSC
T ss_pred CCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCcC
Confidence 999999997644 788999999999999999887543
No 76
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.86 E-value=1.4e-20 Score=136.09 Aligned_cols=100 Identities=24% Similarity=0.437 Sum_probs=91.4
Q ss_pred EEcCh-hcHHHHhc--CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEe
Q 021976 59 VSLNG-KNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (304)
Q Consensus 59 ~~l~~-~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (304)
..+++ ++|++.+. ++++++|.||++||++|+.+.|.++++++.++ ++.++.+|++++++++++|+|.++||+++++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNEEAAAKYSVTAMPTFVFIK 80 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCHHHHHHcCCccccEEEEEe
Confidence 34555 88998886 68999999999999999999999999999987 7999999999999999999999999999999
Q ss_pred CCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 136 AGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+|+.+.++.| .+.+++.+++.+++
T Consensus 81 ~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 81 DGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp TTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred CCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 9999999999 68999999998753
No 77
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.85 E-value=1.2e-21 Score=149.94 Aligned_cols=111 Identities=9% Similarity=0.131 Sum_probs=83.3
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEEcCC--ChhhhhhHHHHHHHHHHhhCCcE--EEEEeCcccHHHHHhCCCccccEEE
Q 021976 57 DVVSLNGKNFSEFMGKNRNVMVMFYANW--CYWSKKLAPEFAAAAKMLKGEAD--LVMVDAYLEKDLAKEYNILAYPTLY 132 (304)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~f~a~w--C~~C~~~~~~~~~~~~~~~~~~~--~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (304)
.+..+++++|++.+.+++.++|.||++| |++|+.+.|.|+++++++ +++. +++||++++++++++|||.++||++
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~~la~~~~V~~iPT~~ 96 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSEAIGDRFNVRRFPATL 96 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHHHHHHTTTCCSSSEEE
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCHHHHHhcCCCcCCeEE
Confidence 6788999999999987788999999988 999999999999999999 6788 9999999999999999999999999
Q ss_pred EEeCCeEEEEeeCCCCHHHHHHHHHHHhCCCceecC
Q 021976 133 LFVAGVRQFQFFGERTRDVISAWVREKMTLGTYSIT 168 (304)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~l~ 168 (304)
+|++|+.+.++.|..+.++|.+++.+.+..+...+.
T Consensus 97 ~fk~G~~v~~~~G~~~~~~l~~~i~~~l~~~~~~~~ 132 (142)
T 2es7_A 97 VFTDGKLRGALSGIHPWAELLTLMRSIVDTPAAQET 132 (142)
T ss_dssp EESCC----CEESCCCHHHHHHHHHHHHC-------
T ss_pred EEeCCEEEEEEeCCCCHHHHHHHHHHHhcccccCCC
Confidence 999999999999999999999999999987766653
No 78
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.85 E-value=1.3e-20 Score=141.22 Aligned_cols=105 Identities=25% Similarity=0.357 Sum_probs=95.0
Q ss_pred cCCCcEEc-ChhcHHHHhc----CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccc
Q 021976 54 YAKDVVSL-NGKNFSEFMG----KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAY 128 (304)
Q Consensus 54 ~~~~v~~l-~~~~~~~~~~----~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~ 128 (304)
+...+..+ +.++|++.+. ++++++|+||++||++|+.+.|.+++++++++ ++.++.||++++++++++|+|.++
T Consensus 14 ~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~ 92 (124)
T 1xfl_A 14 EEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELKSVASDWAIQAM 92 (124)
T ss_dssp CCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSHHHHHHTTCCSS
T ss_pred CCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCHHHHHHcCCCcc
Confidence 34567777 6789998774 48999999999999999999999999999997 799999999999999999999999
Q ss_pred cEEEEEeCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 129 PTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 129 Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
||++++++|+.+.++.| .+.+++.+++.+.+
T Consensus 93 Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 93 PTFMFLKEGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp SEEEEEETTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred CEEEEEECCEEEEEEeC-CCHHHHHHHHHHhc
Confidence 99999999999999999 48999999998765
No 79
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.85 E-value=4.2e-21 Score=144.17 Aligned_cols=106 Identities=16% Similarity=0.224 Sum_probs=94.4
Q ss_pred cEEcChhcHH-----HHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEe--CcccHHHHHhCCCccccE
Q 021976 58 VVSLNGKNFS-----EFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVD--AYLEKDLAKEYNILAYPT 130 (304)
Q Consensus 58 v~~l~~~~~~-----~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd--~~~~~~~~~~~~v~~~Pt 130 (304)
+..++.++++ ....++++++|.||++||++|+++.|.++++++++++++.++.|| ++++.+++++|+|.++||
T Consensus 6 ~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt 85 (126)
T 2l57_A 6 IKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPT 85 (126)
T ss_dssp SSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSE
T ss_pred cCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeE
Confidence 3445555555 455678999999999999999999999999999997789999999 999999999999999999
Q ss_pred EEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhCCC
Q 021976 131 LYLFV-AGVRQFQFFGERTRDVISAWVREKMTLG 163 (304)
Q Consensus 131 ~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (304)
+++|+ +|+.+.++.|..+.+++.+++++.+.+.
T Consensus 86 ~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 86 TVFLDKEGNKFYVHQGLMRKNNIETILNSLGVKE 119 (126)
T ss_dssp EEEECTTCCEEEEEESCCCHHHHHHHHHHHCCCC
T ss_pred EEEECCCCCEEEEecCCCCHHHHHHHHHHHhccc
Confidence 99999 9988999999999999999999988654
No 80
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.85 E-value=3.1e-21 Score=143.27 Aligned_cols=102 Identities=13% Similarity=0.149 Sum_probs=88.8
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeC----cccHHHHHhCCCccccEE
Q 021976 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA----YLEKDLAKEYNILAYPTL 131 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~----~~~~~~~~~~~v~~~Pt~ 131 (304)
..+..++.++|++.+.++++++|+|||+||++|+++.|.+++++++++..+.++.++. ++.++++++|||.++||+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~ 91 (118)
T 1zma_A 12 KDLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVPGF 91 (118)
T ss_dssp TTSEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSSCEE
T ss_pred hhhhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCCCeE
Confidence 4678889999999998899999999999999999999999999998865555553332 334678999999999999
Q ss_pred EEEeCCeEEEEeeCCCCHHHHHHHHH
Q 021976 132 YLFVAGVRQFQFFGERTRDVISAWVR 157 (304)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~ 157 (304)
++|++|+.+.++.|..+.++|.+|+.
T Consensus 92 ~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 92 VHITDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp EEEETTEEEEECCTTCCHHHHHHHHT
T ss_pred EEEECCEEEEEecCCCCHHHHHHHhh
Confidence 99999999999999999999999985
No 81
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.85 E-value=1.5e-20 Score=138.84 Aligned_cols=100 Identities=13% Similarity=0.209 Sum_probs=87.8
Q ss_pred CCcEEcChhcHHHHhcC-CC--cEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEE
Q 021976 56 KDVVSLNGKNFSEFMGK-NR--NVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~~~-~~--~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (304)
..+.+++.++|.+.+.+ ++ +++|+|||+||++|+.+.|.+++++++++ ++.|++||+++. +++|+|.++||++
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~~---~~~~~v~~~PT~~ 78 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVNSC---IQHYHDNCLPTIF 78 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGGT---STTCCGGGCSEEE
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhHHh---HHHCCCCCCCEEE
Confidence 46788999999987743 33 89999999999999999999999999997 699999999986 5899999999999
Q ss_pred EEeCCeEEEEeeCCC-------CHHHHHHHHHHH
Q 021976 133 LFVAGVRQFQFFGER-------TRDVISAWVREK 159 (304)
Q Consensus 133 ~~~~g~~~~~~~g~~-------~~~~l~~~i~~~ 159 (304)
+|++|+.+.++.|.. +.++++.+|.+.
T Consensus 79 ~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 79 VYKNGQIEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp EEETTEEEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred EEECCEEEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 999999999999864 678888887654
No 82
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.84 E-value=1.6e-20 Score=140.01 Aligned_cols=104 Identities=23% Similarity=0.419 Sum_probs=95.1
Q ss_pred CCcEEcCh-hcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCC-cEEEEEeCcccHHHHHhCCCccccEEEE
Q 021976 56 KDVVSLNG-KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGE-ADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (304)
Q Consensus 56 ~~v~~l~~-~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (304)
..+..++. ++|++.++++++++|.||++||++|+.+.|.++++++.+++. +.++.||++++++++++|+|.++||+++
T Consensus 15 ~~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt~~~ 94 (121)
T 2j23_A 15 GSVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFVF 94 (121)
T ss_dssp CCEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSEEEE
T ss_pred cceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccEEEE
Confidence 45556655 889999988999999999999999999999999999998863 9999999999999999999999999999
Q ss_pred EeCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 134 FVAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
|++|+.+.++.|. +.+++.+++.+.+
T Consensus 95 ~~~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 95 FKNGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EETTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred EECCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 9999999999998 9999999998765
No 83
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=6.3e-22 Score=151.02 Aligned_cols=104 Identities=21% Similarity=0.322 Sum_probs=94.5
Q ss_pred CCcEEcChhcHHHHhcCC--CcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcccHHHHHhCCCc------
Q 021976 56 KDVVSLNGKNFSEFMGKN--RNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKDLAKEYNIL------ 126 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~--~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~------ 126 (304)
..+..++.++|++.+.++ ++++|+|||+||++|+++.|.|+++++++++ ++.++.||++++++++++|+|.
T Consensus 7 ~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~~ 86 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTK 86 (137)
T ss_dssp SCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSSS
T ss_pred ceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCcC
Confidence 578999999999888443 4899999999999999999999999999986 8999999999999999999999
Q ss_pred cccEEEEEeCCeEEEEeeCCCCHHHHHHHHHHH
Q 021976 127 AYPTLYLFVAGVRQFQFFGERTRDVISAWVREK 159 (304)
Q Consensus 127 ~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~ 159 (304)
++||+++|++|+.+.++.|..+.+.+.+|+.+.
T Consensus 87 ~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 87 QLPTLILFQGGKEAMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp CSSEEEEESSSSEEEEESCBCSSSCBCCCCCCH
T ss_pred CCCEEEEEECCEEEEEecCcCchHHHHHHHhcc
Confidence 999999999999999999998888887777544
No 84
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.84 E-value=4.7e-20 Score=140.86 Aligned_cols=106 Identities=16% Similarity=0.328 Sum_probs=95.5
Q ss_pred CCCcEEcC-hhcHHHHh----cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCcccc
Q 021976 55 AKDVVSLN-GKNFSEFM----GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYP 129 (304)
Q Consensus 55 ~~~v~~l~-~~~~~~~~----~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~P 129 (304)
...+..++ .++|++.+ .++++++|+||++||++|+.+.|.+++++++++ ++.++.||++++++++++|||.++|
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~P 101 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVDELSDFSASWEIKATP 101 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCEES
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcccHHHHHHcCCCccc
Confidence 34566664 78999877 358999999999999999999999999999986 7999999999999999999999999
Q ss_pred EEEEEeCCeEEEEeeCCCCHHHHHHHHHHHhCC
Q 021976 130 TLYLFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (304)
Q Consensus 130 t~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (304)
|++++++|+.+.++.|. +.+++.+++.+.++.
T Consensus 102 t~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 102 TFFFLRDGQQVDKLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp EEEEEETTEEEEEEESC-CHHHHHHHHHHHHHT
T ss_pred EEEEEcCCeEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 99999999999999998 899999999988754
No 85
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.84 E-value=1.7e-21 Score=147.66 Aligned_cols=111 Identities=25% Similarity=0.498 Sum_probs=97.6
Q ss_pred cCCCcEEcChhcHHHHhc-CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhh--CCcEEEEEeCcccHHHHHhCCCccccE
Q 021976 54 YAKDVVSLNGKNFSEFMG-KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK--GEADLVMVDAYLEKDLAKEYNILAYPT 130 (304)
Q Consensus 54 ~~~~v~~l~~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~~vd~~~~~~~~~~~~v~~~Pt 130 (304)
+...+..+++++|++.+. ++++++|+|||+||++|+++.|.|++++++++ +.+.++.||+++++.++++|+|.++||
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 84 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPT 84 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSE
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCE
Confidence 346899999999998774 58999999999999999999999999999997 379999999999999999999999999
Q ss_pred EEEEeCCeEE--EEee-CCCCHHHHHHHHHHHhCCCc
Q 021976 131 LYLFVAGVRQ--FQFF-GERTRDVISAWVREKMTLGT 164 (304)
Q Consensus 131 ~~~~~~g~~~--~~~~-g~~~~~~l~~~i~~~~~~~~ 164 (304)
+++|++|+.+ ..|. |..+.+.|.+||.+++....
T Consensus 85 ~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~~ 121 (133)
T 2dj3_A 85 IYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKRS 121 (133)
T ss_dssp EEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSCS
T ss_pred EEEEeCCCcccceEecCCCcCHHHHHHHHHHhccccc
Confidence 9999976433 3677 56899999999999986543
No 86
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.84 E-value=6.6e-20 Score=135.77 Aligned_cols=105 Identities=29% Similarity=0.409 Sum_probs=94.9
Q ss_pred CCcEEc-ChhcHHHHhcC----CCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccE
Q 021976 56 KDVVSL-NGKNFSEFMGK----NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (304)
Q Consensus 56 ~~v~~l-~~~~~~~~~~~----~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 130 (304)
..++.+ +.++|++.+.. +++++|.||++||++|+++.|.+++++++++ ++.++.+|++++++++++|+|.++||
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt 84 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDELKDVAEAYNVEAMPT 84 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSBSE
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccCHHHHHHcCCCcCcE
Confidence 466777 57899988754 8999999999999999999999999999997 79999999999999999999999999
Q ss_pred EEEEeCCeEEEEeeCCCCHHHHHHHHHHHhCC
Q 021976 131 LYLFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (304)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (304)
++++++|+.+.++.| .+.+++.+++.+.+..
T Consensus 85 ~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 85 FLFIKDGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp EEEEETTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred EEEEeCCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 999999998889999 5899999999988754
No 87
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.83 E-value=2.4e-20 Score=143.05 Aligned_cols=99 Identities=17% Similarity=0.210 Sum_probs=86.3
Q ss_pred ChhcHHHHh-c-CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEeCCeE
Q 021976 62 NGKNFSEFM-G-KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVR 139 (304)
Q Consensus 62 ~~~~~~~~~-~-~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 139 (304)
+.++|++.+ + ++++++|+|||+||++|+.+.|.++++++++++++.++.||++++++++++|+|.++||+++|++|+.
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~~ 89 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKH 89 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEEEEEECCcE
Confidence 568898766 3 58999999999999999999999999999997789999999999999999999999999999999977
Q ss_pred EE---------EeeCCCC-HHHHHHHHHHHh
Q 021976 140 QF---------QFFGERT-RDVISAWVREKM 160 (304)
Q Consensus 140 ~~---------~~~g~~~-~~~l~~~i~~~~ 160 (304)
+. +..|..+ .+++.+++++.+
T Consensus 90 v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~ 120 (142)
T 1qgv_A 90 IMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120 (142)
T ss_dssp EEEECC------CCSCCSCHHHHHHHHHHHH
T ss_pred EEEecCCCCcceeeeecCcHHHHHHHHHHHH
Confidence 65 3456554 788888887665
No 88
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.83 E-value=5.4e-20 Score=136.54 Aligned_cols=106 Identities=19% Similarity=0.266 Sum_probs=91.6
Q ss_pred CCcEEc--ChhcHHHH-hcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEE
Q 021976 56 KDVVSL--NGKNFSEF-MGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (304)
Q Consensus 56 ~~v~~l--~~~~~~~~-~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (304)
..+..+ +.++|++. .+++++++|.||++||++|+.+.|.++++++++ +++.++.||++++++++++|+|.++||++
T Consensus 3 ~~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~ 81 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNGNAADAYGVSSIPALF 81 (118)
T ss_dssp CCSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CcceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCHHHHHhcCCCCCCEEE
Confidence 356666 57889854 467899999999999999999999999999999 58999999999999999999999999999
Q ss_pred EEeC----CeEEEEeeCCCCHHHHHHHHHHHhCCC
Q 021976 133 LFVA----GVRQFQFFGERTRDVISAWVREKMTLG 163 (304)
Q Consensus 133 ~~~~----g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (304)
+|++ |+.+.++.|..+ ++|.+.+.++..++
T Consensus 82 ~~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~~~~~ 115 (118)
T 2f51_A 82 FVKKEGNEIKTLDQFVGADV-SRIKADIEKFKHHH 115 (118)
T ss_dssp EEEEETTEEEEEEEEESCCH-HHHHHHHHHHC---
T ss_pred EEeCCCCcceEEEeecCCCH-HHHHHHHHHhhhcc
Confidence 9998 888899999765 56999998887543
No 89
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.83 E-value=6.7e-20 Score=153.04 Aligned_cols=109 Identities=36% Similarity=0.546 Sum_probs=100.5
Q ss_pred CCCcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC---CcEEEEEeCcccHHHHHhCCCccccEE
Q 021976 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG---EADLVMVDAYLEKDLAKEYNILAYPTL 131 (304)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 131 (304)
...+..++.++|++.+.++++++|+|||+||++|+.+.|.|.++++++.+ .+.++.||++++++++++|||.++||+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 208 (241)
T 3idv_A 129 PEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTL 208 (241)
T ss_dssp CCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEE
Confidence 35688899999999998889999999999999999999999999999976 399999999999999999999999999
Q ss_pred EEEeCCeEEEEeeCCCCHHHHHHHHHHHhCCCc
Q 021976 132 YLFVAGVRQFQFFGERTRDVISAWVREKMTLGT 164 (304)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~ 164 (304)
++|++|+.+. |.|.++.++|.+|+.+++++.+
T Consensus 209 ~~~~~g~~~~-~~g~~~~~~l~~~l~~~~~~~~ 240 (241)
T 3idv_A 209 KIFRKGRPYD-YNGPREKYGIVDYMIEQSGAAA 240 (241)
T ss_dssp EEEETTEEEE-CCSCCSHHHHHHHHHHHTTCTT
T ss_pred EEEECCeEEE-ecCCCCHHHHHHHHHhhhCCCC
Confidence 9999996655 9999999999999999987653
No 90
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.83 E-value=4.7e-20 Score=135.47 Aligned_cols=103 Identities=26% Similarity=0.395 Sum_probs=93.5
Q ss_pred CCcEEc-ChhcHHHHhc----CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccE
Q 021976 56 KDVVSL-NGKNFSEFMG----KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (304)
Q Consensus 56 ~~v~~l-~~~~~~~~~~----~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 130 (304)
..+..+ +.++|++.+. ++++++|.||++||++|+.+.|.++++++.++ ++.++.+|++++++++++|+|.++||
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~Pt 82 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELKAVAEEWNVEAMPT 82 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCHHHHHHHHCSSTTE
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccHHHHHhCCCCcccE
Confidence 456777 6789998874 48999999999999999999999999999987 79999999999999999999999999
Q ss_pred EEEEeCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 131 LYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
++++++|+.+.++.| .+.+++.+++.+++
T Consensus 83 ~~~~~~G~~~~~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 83 FIFLKDGKLVDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp EEEEETTEEEEEEEC-CCTTHHHHHHHHHH
T ss_pred EEEEeCCEEEEEEec-CCHHHHHHHHHHhh
Confidence 999999998889999 58899999998875
No 91
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.83 E-value=4.4e-20 Score=140.03 Aligned_cols=104 Identities=18% Similarity=0.281 Sum_probs=92.4
Q ss_pred CCCcEEcCh-hcHHHHhcC--CCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEE
Q 021976 55 AKDVVSLNG-KNFSEFMGK--NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTL 131 (304)
Q Consensus 55 ~~~v~~l~~-~~~~~~~~~--~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 131 (304)
...+..+++ ++|++.+.. +++++|+|||+||++|+++.|.++++++.+ ++.++.||++++++++++|+|.++||+
T Consensus 19 ~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 96 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIHPKLNDQHNIKALPTF 96 (133)
T ss_dssp TEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccchHHHHHhcCCCCCCEE
Confidence 356788875 888888854 579999999999999999999999998877 589999999999999999999999999
Q ss_pred EEEe--CCe--EEEEeeCCCCHHHHHHHHHHHhC
Q 021976 132 YLFV--AGV--RQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 132 ~~~~--~g~--~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
++|+ +|+ .+.++.|. +.++|.+++.+.+.
T Consensus 97 ~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 97 EFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp EEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred EEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 9996 887 77889998 89999999998864
No 92
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=2e-19 Score=136.75 Aligned_cols=101 Identities=13% Similarity=0.184 Sum_probs=90.7
Q ss_pred CCcEEcChhcHHHHhcC---CCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEE
Q 021976 56 KDVVSLNGKNFSEFMGK---NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~~~---~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 132 (304)
..+..++.++|.+.+.+ +++++|+|||+||++|+.+.|.|+++++++. ++.|+.||++++. ++|+|.++||++
T Consensus 10 g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~~---~~~~i~~~Pt~~ 85 (135)
T 2dbc_A 10 GELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSCI---EHYHDNCLPTIF 85 (135)
T ss_dssp CSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSSC---SSCCSSCCSEEE
T ss_pred CceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcCc---ccCCCCCCCEEE
Confidence 57888999999988843 3689999999999999999999999999986 7999999999875 789999999999
Q ss_pred EEeCCeEEEEeeCCC-------CHHHHHHHHHHHh
Q 021976 133 LFVAGVRQFQFFGER-------TRDVISAWVREKM 160 (304)
Q Consensus 133 ~~~~g~~~~~~~g~~-------~~~~l~~~i~~~~ 160 (304)
+|++|+.+.++.|.. +.++|.+++.++.
T Consensus 86 ~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 86 VYKNGQIEGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp EESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred EEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 999999899999875 7899999998874
No 93
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.80 E-value=4.8e-19 Score=146.50 Aligned_cols=104 Identities=17% Similarity=0.220 Sum_probs=94.4
Q ss_pred CcEEcChhcHHHHhcCCCcE-EEEEEcCCChhhhhhHHHHHHHHHHhh----CCcEEEEEeCcccHHHHHhCCCccccEE
Q 021976 57 DVVSLNGKNFSEFMGKNRNV-MVMFYANWCYWSKKLAPEFAAAAKMLK----GEADLVMVDAYLEKDLAKEYNILAYPTL 131 (304)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~-lv~f~a~wC~~C~~~~~~~~~~~~~~~----~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 131 (304)
....+++++++.+...++++ +|.|||+||++|+++.|.|+++++.++ +++.++.||++++++++++|||.++||+
T Consensus 117 ~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 196 (226)
T 1a8l_A 117 EETNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKI 196 (226)
T ss_dssp TCCCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEE
T ss_pred CCCCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeE
Confidence 34567888888877666666 999999999999999999999999998 5899999999999999999999999999
Q ss_pred EEEeCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 132 YLFVAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
++|++|+...++.|..+.+++.+|+.+.+
T Consensus 197 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 197 VIQVNGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEeCCceeEEEcCCCCHHHHHHHHHHhh
Confidence 99999998999999999999999998765
No 94
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.80 E-value=2.6e-19 Score=135.01 Aligned_cols=106 Identities=19% Similarity=0.313 Sum_probs=92.6
Q ss_pred cEEcChhcHHHHh----cCCCcEEEEEEcCCChhhhhhHHHH---HHHHHHhhCCcEEEEEeCc--ccHHHHHhCCCccc
Q 021976 58 VVSLNGKNFSEFM----GKNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAY--LEKDLAKEYNILAY 128 (304)
Q Consensus 58 v~~l~~~~~~~~~----~~~~~~lv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~ 128 (304)
.+.++..+|++.+ .++++++|+||++||++|+++.|.+ +++++.++.++.++.||++ .+..++++|+|.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~ 87 (130)
T 2kuc_A 8 GIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAY 87 (130)
T ss_dssp CCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSS
T ss_pred CCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCC
Confidence 3445777887766 3689999999999999999999999 7788777667899999998 57899999999999
Q ss_pred cEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhCCC
Q 021976 129 PTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTLG 163 (304)
Q Consensus 129 Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (304)
||+++++ +|+.+.++.|..+.+++.++|++.+.+.
T Consensus 88 Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 88 PTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp CEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 9999995 8988999999999999999999988654
No 95
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.80 E-value=7.1e-19 Score=146.16 Aligned_cols=118 Identities=20% Similarity=0.256 Sum_probs=101.7
Q ss_pred CCCcEEcChhcHHHHhcCCCcEEEEEE--cCCChhhhhhHHHHHHHHHHhh---CCcEEEEEeCcc-----cHHHHHhCC
Q 021976 55 AKDVVSLNGKNFSEFMGKNRNVMVMFY--ANWCYWSKKLAPEFAAAAKMLK---GEADLVMVDAYL-----EKDLAKEYN 124 (304)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~~~~lv~f~--a~wC~~C~~~~~~~~~~~~~~~---~~~~~~~vd~~~-----~~~~~~~~~ 124 (304)
...++.+++++|++++.+++++||.|| ||||+ +.|.|+++++.++ +++.|++|||++ ++++|++|+
T Consensus 15 ~~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~ 90 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYK 90 (248)
T ss_dssp CTTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTT
T ss_pred CCCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhC
Confidence 467899999999998888899999999 99998 9999999999985 379999999999 899999999
Q ss_pred Cc--cccEEEEEeCCe--EEEEe--eCCCCHHHHHHHHHHHhCCCceecCCHHHHHHhh
Q 021976 125 IL--AYPTLYLFVAGV--RQFQF--FGERTRDVISAWVREKMTLGTYSITTTDEAERIL 177 (304)
Q Consensus 125 v~--~~Pt~~~~~~g~--~~~~~--~g~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~ 177 (304)
|+ ++||+++|+ |+ .+.+| .|.++.+.|.+|+.++++.....-...+.++.+.
T Consensus 91 V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~~~~~~~g~i~~~d~l~ 148 (248)
T 2c0g_A 91 VDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTPLYIGRDGCIKEFNEVL 148 (248)
T ss_dssp CCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSSCCCCCTTCCHHHHHHH
T ss_pred CCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhccccCCCCchHHHHHHH
Confidence 99 999999999 86 26789 8999999999999999864433333445555554
No 96
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.67 E-value=4.4e-21 Score=139.10 Aligned_cols=102 Identities=25% Similarity=0.480 Sum_probs=93.6
Q ss_pred cEEcChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEeC
Q 021976 58 VVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVA 136 (304)
Q Consensus 58 v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 136 (304)
+.++++++|.+.+ +++++++|.||++||++|+.+.|.++++++++++++.++.+|++++++++++|+|.++||+++|++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 82 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLFKN 82 (106)
Confidence 5678889998655 678999999999999999999999999999998789999999999999999999999999999999
Q ss_pred CeEEEEeeCCCCHHHHHHHHHHH
Q 021976 137 GVRQFQFFGERTRDVISAWVREK 159 (304)
Q Consensus 137 g~~~~~~~g~~~~~~l~~~i~~~ 159 (304)
|+.+.++.|..+.+++.+++.+.
T Consensus 83 g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 83 GQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 98888999999999999998764
No 97
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.78 E-value=7.1e-19 Score=133.22 Aligned_cols=92 Identities=15% Similarity=0.283 Sum_probs=84.2
Q ss_pred HhcCCCcEEEEEEcCCChhhhhhHHHHH--HHHHHhhCCcEEEEEeC---cccHHHHHhCCC---ccccEEEEE-eCCeE
Q 021976 69 FMGKNRNVMVMFYANWCYWSKKLAPEFA--AAAKMLKGEADLVMVDA---YLEKDLAKEYNI---LAYPTLYLF-VAGVR 139 (304)
Q Consensus 69 ~~~~~~~~lv~f~a~wC~~C~~~~~~~~--~~~~~~~~~~~~~~vd~---~~~~~~~~~~~v---~~~Pt~~~~-~~g~~ 139 (304)
...++++++|+|||+||++|+.+.|.++ ++++.+++++.++.||+ +++++++++|+| .++||+++| .+|+.
T Consensus 25 ~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~ 104 (133)
T 3fk8_A 25 GKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKV 104 (133)
T ss_dssp HHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCE
T ss_pred HHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCE
Confidence 3356899999999999999999999999 99999976899999999 999999999999 999999999 59999
Q ss_pred EEEeeC-------CCCHHHHHHHHHHHh
Q 021976 140 QFQFFG-------ERTRDVISAWVREKM 160 (304)
Q Consensus 140 ~~~~~g-------~~~~~~l~~~i~~~~ 160 (304)
+.++.| ..+.+++.+|+++..
T Consensus 105 ~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 105 RYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp EEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred EEEecCCcccccccCCHHHHHHHHHHhc
Confidence 999998 789999999998754
No 98
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.78 E-value=9.3e-19 Score=160.82 Aligned_cols=117 Identities=23% Similarity=0.437 Sum_probs=103.7
Q ss_pred CCCCccCCCcEEcChhcHHHHhc-CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC--CcEEEEEeCcccHHHHHhCCC
Q 021976 49 TWPLLYAKDVVSLNGKNFSEFMG-KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG--EADLVMVDAYLEKDLAKEYNI 125 (304)
Q Consensus 49 ~~~~~~~~~v~~l~~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v 125 (304)
..+..+...+..+++++|++.+. ++++++|+|||+||++|+++.|.|+++++.+++ ++.++.+|++.+ +++++|+|
T Consensus 345 ~~p~~~~~~v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~-~~~~~~~v 423 (481)
T 3f8u_A 345 PIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-DVPSPYEV 423 (481)
T ss_dssp CCCSCCCSSSEEECTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS-CCCTTCCC
T ss_pred CCCCCCCCCeEEecccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch-hhHhhCCC
Confidence 34444567889999999998884 489999999999999999999999999999987 699999999998 88999999
Q ss_pred ccccEEEEEeCCeE--EEEeeCCCCHHHHHHHHHHHhCCCcee
Q 021976 126 LAYPTLYLFVAGVR--QFQFFGERTRDVISAWVREKMTLGTYS 166 (304)
Q Consensus 126 ~~~Pt~~~~~~g~~--~~~~~g~~~~~~l~~~i~~~~~~~~~~ 166 (304)
.++||+++|++|.. +.+|.|.++.+.+.+|+.++...+...
T Consensus 424 ~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~~~~~~ 466 (481)
T 3f8u_A 424 RGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREATNPPVI 466 (481)
T ss_dssp CSSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHCSSCCCC
T ss_pred cccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhcCCcccc
Confidence 99999999997754 789999999999999999998766543
No 99
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.77 E-value=3.7e-18 Score=141.38 Aligned_cols=101 Identities=23% Similarity=0.398 Sum_probs=93.1
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEEc--CCChhhhhhHHHHHHHHHHhhC--CcEEEEEe-----CcccHHHHHhCCCc
Q 021976 56 KDVVSLNGKNFSEFMGKNRNVMVMFYA--NWCYWSKKLAPEFAAAAKMLKG--EADLVMVD-----AYLEKDLAKEYNIL 126 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~f~a--~wC~~C~~~~~~~~~~~~~~~~--~~~~~~vd-----~~~~~~~~~~~~v~ 126 (304)
+.|+.+++++|++.+.++++|+|.||| |||+ +.|.|+++++.+++ ++.|+.|| |++++++|++|+|+
T Consensus 5 ~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~ 80 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLD 80 (240)
T ss_dssp TTCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCC
T ss_pred CCceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCC
Confidence 578999999999998888999999999 9999 99999999999964 79999999 55699999999999
Q ss_pred --cccEEEEEeCCe--EEEEeeCCCCHHHHHHHHHHHh
Q 021976 127 --AYPTLYLFVAGV--RQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 127 --~~Pt~~~~~~g~--~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
++||+++|++|+ .+.+|.|.++.+.|.+|+.++.
T Consensus 81 ~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 81 KESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp GGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 999999999996 4789999999999999999885
No 100
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.77 E-value=8.7e-19 Score=132.98 Aligned_cols=100 Identities=23% Similarity=0.388 Sum_probs=86.8
Q ss_pred cChhcHHHHhc--CCCcEEEEEEcCCChhhhhhHHHH---HHHHHHhhCCcEEEEEeC----cccHHHHHhCCCccccEE
Q 021976 61 LNGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDA----YLEKDLAKEYNILAYPTL 131 (304)
Q Consensus 61 l~~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~vd~----~~~~~~~~~~~v~~~Pt~ 131 (304)
.+.++++..+. ++++++|+|||+||++|+++.|.+ .++++.++ ++.++.||+ +.+.+++++|||.++||+
T Consensus 17 ~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-~~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~ 95 (134)
T 2fwh_A 17 KTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-DTVLLQANVTANDAQDVALLKHLNVLGLPTI 95 (134)
T ss_dssp CSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-TSEEEEEECTTCCHHHHHHHHHTTCCSSSEE
T ss_pred cCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-CcEEEEEeCCCCcchHHHHHHHcCCCCCCEE
Confidence 45577777764 489999999999999999999999 99999988 599999999 667899999999999999
Q ss_pred EEE-eCCeEE--EEeeCCCCHHHHHHHHHHHhC
Q 021976 132 YLF-VAGVRQ--FQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 132 ~~~-~~g~~~--~~~~g~~~~~~l~~~i~~~~~ 161 (304)
+++ ++|+.+ .++.|..+.++|.+++.+.-+
T Consensus 96 ~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~~ 128 (134)
T 2fwh_A 96 LFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP 128 (134)
T ss_dssp EEECTTSCBCGGGCBCSCCCHHHHHHHHHHC--
T ss_pred EEECCCCCEeeeeeeeeccCHHHHHHHHHhcCc
Confidence 999 589776 689999999999999986553
No 101
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.76 E-value=8.9e-19 Score=143.54 Aligned_cols=104 Identities=16% Similarity=0.207 Sum_probs=92.5
Q ss_pred CCCcEEc-ChhcHHHHhcC---CCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccE
Q 021976 55 AKDVVSL-NGKNFSEFMGK---NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (304)
Q Consensus 55 ~~~v~~l-~~~~~~~~~~~---~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 130 (304)
...|..+ +.++|.+.+.+ +++++|+|||+||++|+.+.|.|.++++.++ .+.|+.||++ ++.++++|+|.++||
T Consensus 98 ~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~-~~~l~~~~~i~~~PT 175 (217)
T 2trc_P 98 YGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS-NTGAGDRFSSDVLPT 175 (217)
T ss_dssp CCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH-HHTCSTTSCGGGCSE
T ss_pred CCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC-cHHHHHHCCCCCCCE
Confidence 3568888 88999988833 3899999999999999999999999999997 8999999999 888999999999999
Q ss_pred EEEEeCCeEEEEeeCCCCH-------HHHHHHHHHHh
Q 021976 131 LYLFVAGVRQFQFFGERTR-------DVISAWVREKM 160 (304)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~-------~~l~~~i~~~~ 160 (304)
+++|++|+.+.++.|..+. +.|..+|.++.
T Consensus 176 l~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~g 212 (217)
T 2trc_P 176 LLVYKGGELISNFISVAEQFAEDFFAADVESFLNEYG 212 (217)
T ss_dssp EEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTTT
T ss_pred EEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHcC
Confidence 9999999998999987664 88999887653
No 102
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.76 E-value=1.7e-16 Score=131.33 Aligned_cols=196 Identities=13% Similarity=0.176 Sum_probs=153.6
Q ss_pred CcEEc-ChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEe
Q 021976 57 DVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (304)
Q Consensus 57 ~v~~l-~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (304)
.++.+ +.+++++.++.+++++|.|+++| |..+.+.|.++|+.+. .+.|+... ++++|++|++++ |++++|+
T Consensus 10 ~~~~l~s~~~~~~~l~~~~v~vVgff~~~---~~~~~~~f~~~A~~l~-~~~F~~t~---~~~v~~~~~v~~-p~i~lfk 81 (227)
T 4f9z_D 10 EPTWLTDVPAAMEFIAATEVAVIGFFQDL---EIPAVPILHSMVQKFP-GVSFGIST---DSEVLTHYNITG-NTICLFR 81 (227)
T ss_dssp CCEECCSHHHHHHHHHTSSEEEEEECSCS---CSTHHHHHHHHTTTCT-TSEEEEEC---CHHHHHHTTCCS-SEEEEEE
T ss_pred CCeeeCCHHHHHHHHhcCCeEEEEEecCC---CchhHHHHHHHHHhCC-CceEEEEC---CHHHHHHcCCCC-CeEEEEE
Confidence 34445 66899999988999999999998 5688999999999995 88898754 788999999998 9999999
Q ss_pred CC-eEEEEeeC----CCCHHHHHHHHHHHhCCCceecCCHHHHHHhhccCCe-EEEEEecCCCCc---cHHHHHHHh-cc
Q 021976 136 AG-VRQFQFFG----ERTRDVISAWVREKMTLGTYSITTTDEAERILTVESK-LVLGFLHDLEGM---ESEELAAAS-KL 205 (304)
Q Consensus 136 ~g-~~~~~~~g----~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~-~~v~f~~~~~~~---~~~~~~~~a-~~ 205 (304)
++ +....|.| .++.+.|.+|++.+..|.+.++ +.+++..+.+...+ .++.|..+++.. ....+..+| .+
T Consensus 82 ~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~-t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~ 160 (227)
T 4f9z_D 82 LVDNEQLNLEDEDIESIDATKLSRFIEINSLHMVTEY-NPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLF 160 (227)
T ss_dssp TTTTEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEEC-CHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHT
T ss_pred ecCcccccccccccCCCCHHHHHHHHHHhCCCceeec-CcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHh
Confidence 64 35567874 7999999999999999999998 56677777766544 444455666543 345677777 68
Q ss_pred CCceeEEEec-----CHHHHhhcCCCCCCCCCeEEEEecCCCceeccc-CCCCHHHHHHHHhc
Q 021976 206 HSDVNFYQTT-----SADVAEFFHIHPKSKRPALIFLHLEAGKATPFR-HQFTRLAIANFVTH 262 (304)
Q Consensus 206 ~~~~~f~~~~-----~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~-g~~~~~~i~~fi~~ 262 (304)
++++.|..+. ...+++.||++. .++|++++++..+.....+. ++++.++|.+|+..
T Consensus 161 k~~i~F~~vd~~~~~~~~~l~~fgl~~-~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~ 222 (227)
T 4f9z_D 161 QGKILFILVDSGMKENGKVISFFKLKE-SQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDG 222 (227)
T ss_dssp TTTCEEEEEETTSGGGHHHHHHTTCCG-GGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHH
T ss_pred hCCEEEEEeCCccHhHHHHHHHcCCCc-ccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHH
Confidence 8888888653 346889999972 24999999987655444443 78999999999975
No 103
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.75 E-value=3.5e-18 Score=141.88 Aligned_cols=104 Identities=16% Similarity=0.174 Sum_probs=91.4
Q ss_pred CCCcEEc-ChhcHHHHhc---CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccE
Q 021976 55 AKDVVSL-NGKNFSEFMG---KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (304)
Q Consensus 55 ~~~v~~l-~~~~~~~~~~---~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 130 (304)
...|..+ +.++|.+.+. ++++++|+|||+||++|+.+.|.|.+++++++ .+.|+.||+++ ..++++|+|.++||
T Consensus 111 ~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~-~v~f~kVd~d~-~~l~~~~~I~~~PT 188 (245)
T 1a0r_P 111 YGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYP-MVKFCKIKASN-TGAGDRFSSDVLPT 188 (245)
T ss_dssp CCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT-TSEEEEEEHHH-HCCTTSSCTTTCSE
T ss_pred CCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CCEEEEEeCCc-HHHHHHCCCCCCCE
Confidence 4578888 7899998883 37899999999999999999999999999998 59999999987 77899999999999
Q ss_pred EEEEeCCeEEEEeeCC-------CCHHHHHHHHHHHh
Q 021976 131 LYLFVAGVRQFQFFGE-------RTRDVISAWVREKM 160 (304)
Q Consensus 131 ~~~~~~g~~~~~~~g~-------~~~~~l~~~i~~~~ 160 (304)
+++|++|+.+.++.|. .+.+.|..+|.++.
T Consensus 189 ll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 189 LLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp EEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred EEEEECCEEEEEEeCCcccccccccHHHHHHHHHHcC
Confidence 9999999888888775 35678888888764
No 104
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.75 E-value=2.4e-18 Score=119.63 Aligned_cols=83 Identities=17% Similarity=0.353 Sum_probs=76.7
Q ss_pred CcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHH
Q 021976 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVIS 153 (304)
Q Consensus 74 ~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~ 153 (304)
.+.+|.||++||++|+++.|.++++++++++++.++.+|++++++++++|||.++||+++ +|+. ++.|..+.+++.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~~~~l~ 78 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV--EFIGAPTKEALV 78 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE--ECCSSSSSHHHH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE--eeecCCCHHHHH
Confidence 468999999999999999999999999998889999999999999999999999999988 8865 889998999999
Q ss_pred HHHHHHh
Q 021976 154 AWVREKM 160 (304)
Q Consensus 154 ~~i~~~~ 160 (304)
+++.+.+
T Consensus 79 ~~l~~~l 85 (85)
T 1fo5_A 79 EAIKKRL 85 (85)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9998753
No 105
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.75 E-value=2.5e-18 Score=119.52 Aligned_cols=82 Identities=21% Similarity=0.390 Sum_probs=76.2
Q ss_pred cEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHH
Q 021976 75 NVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISA 154 (304)
Q Consensus 75 ~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~ 154 (304)
..+|.||++||++|+++.|.++++++++++++.++.+|++++++++++|||.++||+++ +|+. ++.|..+.+++.+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~~~~l~~ 78 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV--RFVGAPSREELFE 78 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE--EEECSSCCHHHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE--EEccCCCHHHHHH
Confidence 46899999999999999999999999998889999999999999999999999999988 8865 8899989999999
Q ss_pred HHHHHh
Q 021976 155 WVREKM 160 (304)
Q Consensus 155 ~i~~~~ 160 (304)
++.+.+
T Consensus 79 ~l~~~l 84 (85)
T 1nho_A 79 AINDEM 84 (85)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 998765
No 106
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.75 E-value=1.1e-17 Score=120.19 Aligned_cols=98 Identities=19% Similarity=0.243 Sum_probs=84.8
Q ss_pred CcEEc-ChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHH----HHHhCCCc-cccE
Q 021976 57 DVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEYNIL-AYPT 130 (304)
Q Consensus 57 ~v~~l-~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v~-~~Pt 130 (304)
....+ +.++|+++++++++++|.|+|+||++|+.+.|.++++++. +++.++.||.+++++ +++++||+ ..||
T Consensus 7 ~~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq 84 (112)
T 3iv4_A 7 VAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTNVKHESPQ 84 (112)
T ss_dssp CEEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSE
T ss_pred ceeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhCCccCCCe
Confidence 34444 5678999998899999999999999999999999999985 479999999999976 79999999 4999
Q ss_pred EEEEeCCeEEEE-eeCCCCHHHHHHHH
Q 021976 131 LYLFVAGVRQFQ-FFGERTRDVISAWV 156 (304)
Q Consensus 131 ~~~~~~g~~~~~-~~g~~~~~~l~~~i 156 (304)
+++|++|+.+.+ -.|..+.+.|.+.+
T Consensus 85 ~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 85 AFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp EEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred EEEEECCEEEEEeeccccCHHHHHHhh
Confidence 999999988776 45788888887654
No 107
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.74 E-value=1.9e-19 Score=135.72 Aligned_cols=106 Identities=26% Similarity=0.392 Sum_probs=94.4
Q ss_pred CCcEEc-ChhcHHHHhc----CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccE
Q 021976 56 KDVVSL-NGKNFSEFMG----KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (304)
Q Consensus 56 ~~v~~l-~~~~~~~~~~----~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 130 (304)
..+..+ +.++|++.+. ++++++|.||++||++|+.+.|.++++++.++ ++.++.||++++++++++|+|.++||
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~Pt 92 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELKEVAEKYNVEAMPT 92 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSGGGHHHHTCCSSCC
T ss_pred cceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccchHHHHHHcCCCccce
Confidence 456777 4588988774 48999999999999999999999999999997 79999999999999999999999999
Q ss_pred EEEEeCCeEEEEeeCCCCHHHHHHHHHHHhCCC
Q 021976 131 LYLFVAGVRQFQFFGERTRDVISAWVREKMTLG 163 (304)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (304)
++++++|+.+.++.| .+.+++.+++.+.+...
T Consensus 93 ~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~~ 124 (130)
T 1wmj_A 93 FLFIKDGAEADKVVG-ARKDDLQNTIVKHVGAT 124 (130)
T ss_dssp CCBCTTTTCCBCCCT-TCTTTHHHHHHHHTSSS
T ss_pred EEEEeCCeEEEEEeC-CCHHHHHHHHHHHHhcc
Confidence 999999988888888 58889999999988543
No 108
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.74 E-value=4.7e-18 Score=126.97 Aligned_cols=101 Identities=14% Similarity=0.237 Sum_probs=88.0
Q ss_pred CcEEcChhcHHHHhcC--CCcEEEEEEcC-------CChhhhhhHHHHHHHHHHhhCCcEEEEEeC-------cccHHHH
Q 021976 57 DVVSLNGKNFSEFMGK--NRNVMVMFYAN-------WCYWSKKLAPEFAAAAKMLKGEADLVMVDA-------YLEKDLA 120 (304)
Q Consensus 57 ~v~~l~~~~~~~~~~~--~~~~lv~f~a~-------wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~-------~~~~~~~ 120 (304)
.+...+.++|++.+.+ +++++|+|||+ ||++|+.+.|.++++++++++++.++.||+ +.+..++
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~ 85 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFR 85 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHH
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHH
Confidence 4566788999988855 89999999999 999999999999999999977899999999 7888999
Q ss_pred HhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHHHH
Q 021976 121 KEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVRE 158 (304)
Q Consensus 121 ~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~ 158 (304)
++|+|.++||+++|++|.....+.| .+.+.+.+++.+
T Consensus 86 ~~~~i~~~Pt~~~~~~~~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 86 KNLKVTAVPTLLKYGTPQKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHCCCSSSEEEETTSSCEEEGGGG-GCHHHHHHHHHC
T ss_pred HHCCCCeeCEEEEEcCCceEecccc-CCHHHHHHHHhc
Confidence 9999999999999998756555555 567888888864
No 109
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.74 E-value=3.4e-18 Score=135.38 Aligned_cols=102 Identities=14% Similarity=0.156 Sum_probs=84.7
Q ss_pred EEcChhcHHHHh----cCCCcEEEEEEcCCChhhhhhHHHH---HHHHHHhhCCcEEEEEeCcccHHH------------
Q 021976 59 VSLNGKNFSEFM----GKNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAYLEKDL------------ 119 (304)
Q Consensus 59 ~~l~~~~~~~~~----~~~~~~lv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~vd~~~~~~~------------ 119 (304)
...+..+|++.+ .++++++|+|||+||++|+++.+.+ .++.+.+++++.++.||++++.++
T Consensus 29 ~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~ 108 (172)
T 3f9u_A 29 VHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTE 108 (172)
T ss_dssp CCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEE
T ss_pred cccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchh
Confidence 344556677655 6789999999999999999975544 666666665799999999877654
Q ss_pred --------------HHhCCCccccEEEEEe-CCeEEEEeeCCCC-HHHHHHHHHHHh
Q 021976 120 --------------AKEYNILAYPTLYLFV-AGVRQFQFFGERT-RDVISAWVREKM 160 (304)
Q Consensus 120 --------------~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~-~~~l~~~i~~~~ 160 (304)
+++|+|.++||+++++ +|+.+.++.|..+ .+++.++|++.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 109 RTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp EEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHH
Confidence 7899999999999995 8988889999998 999999998775
No 110
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.74 E-value=9.1e-18 Score=127.16 Aligned_cols=106 Identities=18% Similarity=0.242 Sum_probs=95.7
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCcc--ccEEEEE
Q 021976 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILA--YPTLYLF 134 (304)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~--~Pt~~~~ 134 (304)
-+.++|+++|++.+..+.+++|.|||+ |++|+.+.|.++++|+++++++.|+.+|.+++++++++|||++ +||+++|
T Consensus 7 lv~~~t~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~ 85 (133)
T 2djk_A 7 LIGEIGPETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAFAIQ 85 (133)
T ss_dssp CSEECCHHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSSSEEEEE
T ss_pred ceeccChHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccCCEEEEE
Confidence 478899999998888889999999999 8999999999999999999899999999999999999999999 9999999
Q ss_pred eC--CeEEEEee--CCCCHHHHHHHHHHHhCCCc
Q 021976 135 VA--GVRQFQFF--GERTRDVISAWVREKMTLGT 164 (304)
Q Consensus 135 ~~--g~~~~~~~--g~~~~~~l~~~i~~~~~~~~ 164 (304)
++ |+. .... |..+.+.|.+|+++.+...+
T Consensus 86 ~~~~g~~-~~~~~~g~~~~~~l~~fi~~~l~Gkl 118 (133)
T 2djk_A 86 EVAKNQK-FPFDQEKEITFEAIKAFVDDFVAGKI 118 (133)
T ss_dssp CTTTCCB-CCCCSSSCCCHHHHHHHHHHHHHTCC
T ss_pred ecCcCcc-cCCCCccccCHHHHHHHHHHHHcCCc
Confidence 86 644 4655 99999999999999885443
No 111
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.73 E-value=9.1e-18 Score=155.11 Aligned_cols=110 Identities=25% Similarity=0.479 Sum_probs=97.8
Q ss_pred ccCCCcEEcChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhh-C--CcEEEEEeCcccHHHHHhCCCccc
Q 021976 53 LYAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK-G--EADLVMVDAYLEKDLAKEYNILAY 128 (304)
Q Consensus 53 ~~~~~v~~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~-~--~~~~~~vd~~~~~~~~~~~~v~~~ 128 (304)
.....+..+++++|+..+ ..+++++|+|||+||++|+.+.|.|+++++.++ + .+.++.+|++.+... + |+|.++
T Consensus 355 ~~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~-~-~~v~~~ 432 (504)
T 2b5e_A 355 NQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVR-G-VVIEGY 432 (504)
T ss_dssp CCSCSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCS-S-CCCSSS
T ss_pred cccccceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccccc-c-CCceec
Confidence 345679999999999877 568999999999999999999999999999987 3 799999999988654 4 999999
Q ss_pred cEEEEEeCCeE--EEEeeCCCCHHHHHHHHHHHhCCCc
Q 021976 129 PTLYLFVAGVR--QFQFFGERTRDVISAWVREKMTLGT 164 (304)
Q Consensus 129 Pt~~~~~~g~~--~~~~~g~~~~~~l~~~i~~~~~~~~ 164 (304)
||+++|++|+. +.+|.|.++.+.+.+|+.++....+
T Consensus 433 Pt~~~~~~G~~~~~~~~~G~~~~~~l~~~i~~~~~~~~ 470 (504)
T 2b5e_A 433 PTIVLYPGGKKSESVVYQGSRSLDSLFDFIKENGHFDV 470 (504)
T ss_dssp SEEEEECCTTSCCCCBCCSCCCHHHHHHHHHHHCTTCC
T ss_pred CeEEEEeCCceecceEecCCCCHHHHHHHHHhcCCCCC
Confidence 99999998865 7889999999999999999986654
No 112
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.73 E-value=7.2e-19 Score=157.84 Aligned_cols=97 Identities=28% Similarity=0.390 Sum_probs=83.8
Q ss_pred CCCcEEcChhcHHHHhcCC--CcEEEEEEcCCChhhhhhHHHHHHHHHHhhC--------CcEEEEEeCcccHHHHHhCC
Q 021976 55 AKDVVSLNGKNFSEFMGKN--RNVMVMFYANWCYWSKKLAPEFAAAAKMLKG--------EADLVMVDAYLEKDLAKEYN 124 (304)
Q Consensus 55 ~~~v~~l~~~~~~~~~~~~--~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~--------~~~~~~vd~~~~~~~~~~~~ 124 (304)
...+..++.++|++.+.++ ++++|+|||+||++|+++.|.|+++++++++ .+.|+.|||+++++++++|+
T Consensus 22 ~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~ 101 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYD 101 (470)
T ss_dssp CTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTT
T ss_pred CCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcC
Confidence 3679999999999888543 7899999999999999999999999999973 49999999999999999999
Q ss_pred CccccEEEEEeCC--eEEEEeeCCCCHHH
Q 021976 125 ILAYPTLYLFVAG--VRQFQFFGERTRDV 151 (304)
Q Consensus 125 v~~~Pt~~~~~~g--~~~~~~~g~~~~~~ 151 (304)
|.++||+++|++| +...+|.|.++.+.
T Consensus 102 V~~~PTlilf~~gg~~~~~~y~G~r~~e~ 130 (470)
T 3qcp_A 102 INFVPRLFFFYPRDSCRSNEECGTSSLEH 130 (470)
T ss_dssp CCSSCEEEEEEESSCCCTTSCCCCCCEEE
T ss_pred CCccCeEEEEECCCceEEEEeeCCCCHHH
Confidence 9999999999743 34567777655443
No 113
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.71 E-value=4.1e-17 Score=126.75 Aligned_cols=90 Identities=17% Similarity=0.398 Sum_probs=80.0
Q ss_pred cCCCcEEEEEE-cCCChhhhhhHHHH---HHHHHHhhCCcEEEEEeCccc-----------HHHHHhCCCccccEEEEEe
Q 021976 71 GKNRNVMVMFY-ANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAYLE-----------KDLAKEYNILAYPTLYLFV 135 (304)
Q Consensus 71 ~~~~~~lv~f~-a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~vd~~~~-----------~~~~~~~~v~~~Pt~~~~~ 135 (304)
.++++++|+|| |+||++|+++.|.+ .++++.++.++.++.||+++. .+++++|+|.++||+++++
T Consensus 45 ~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~~d 124 (154)
T 2ju5_A 45 QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVFID 124 (154)
T ss_dssp HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEEEC
T ss_pred hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEEEc
Confidence 56899999999 99999999999999 788776655899999999765 4899999999999999995
Q ss_pred -CCeEEEEeeCCC--CHHHHHHHHHHHhC
Q 021976 136 -AGVRQFQFFGER--TRDVISAWVREKMT 161 (304)
Q Consensus 136 -~g~~~~~~~g~~--~~~~l~~~i~~~~~ 161 (304)
+|+.+.++ |.. +.+.+.++|.+.+.
T Consensus 125 ~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 125 AEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp TTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred CCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 89888899 988 89999999988764
No 114
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.71 E-value=1.7e-17 Score=120.93 Aligned_cols=89 Identities=16% Similarity=0.164 Sum_probs=72.8
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC--CcEEEEEeCccc--HHHHHhCCCccccEEEEEeCCeEEEEeeCCC
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG--EADLVMVDAYLE--KDLAKEYNILAYPTLYLFVAGVRQFQFFGER 147 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~ 147 (304)
+...+||+|||+||++|+.+.+.+....+.... .+.+..||++++ ++++.+++|.++||+++|++|+++.+..|..
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~~ 96 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGYP 96 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECCC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCCC
Confidence 457899999999999999998754433221100 377889999886 5788999999999999999999999999999
Q ss_pred CHHHHHHHHHHHh
Q 021976 148 TRDVISAWVREKM 160 (304)
Q Consensus 148 ~~~~l~~~i~~~~ 160 (304)
..+.+.+||.+.+
T Consensus 97 ~~~~f~~~L~~~l 109 (116)
T 3dml_A 97 GEDFFWPMLARLI 109 (116)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9999999998765
No 115
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.71 E-value=4e-17 Score=135.21 Aligned_cols=102 Identities=14% Similarity=0.192 Sum_probs=91.0
Q ss_pred CCcEEcChhcHHHHhcCCCcE-EEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEE
Q 021976 56 KDVVSLNGKNFSEFMGKNRNV-MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~-lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (304)
..+..+++++|+.++..++++ +|.||++||++|+.+.|.+++++++++ ++.++.||++++++++++|||.++||+++
T Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~- 195 (229)
T 2ywm_A 118 QRKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAND-YITSKVIDASENQDLAEQFQVVGVPKIVI- 195 (229)
T ss_dssp TTCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEEGGGCHHHHHHTTCCSSSEEEE-
T ss_pred CCccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCC-CeEEEEEECCCCHHHHHHcCCcccCEEEE-
Confidence 346778889999887665555 889999999999999999999999985 89999999999999999999999999988
Q ss_pred eCCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 135 VAGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
+|+ +.+|.|..+.+++.+|+.+.++
T Consensus 196 -~G~-~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 196 -NKG-VAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp -GGG-TEEEESCCCHHHHHHHHHHHHH
T ss_pred -CCE-EEEeeCCCCHHHHHHHHHHHhh
Confidence 886 6779999999999999988763
No 116
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.71 E-value=6.4e-15 Score=130.24 Aligned_cols=215 Identities=18% Similarity=0.239 Sum_probs=164.2
Q ss_pred CCcEEc-ChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEE
Q 021976 56 KDVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (304)
Q Consensus 56 ~~v~~l-~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (304)
..+..+ +.+++++.+..++.++|.|+.+-+..+ ...|.++|+.+ +++.|+.++ +.++|+++|+.. |++++|
T Consensus 17 ~~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~---~~~f~~~A~~~-~~~~F~~t~---~~~v~~~~~v~~-~~i~lf 88 (361)
T 3uem_A 17 EFATTLPDGAAAESLVESSEVAVIGFFKDVESDS---AKQFLQAAEAI-DDIPFGITS---NSDVFSKYQLDK-DGVVLF 88 (361)
T ss_dssp SSSEECCSHHHHHHHHHTSSEEEEEECSCTTSHH---HHHHHHHHHHC-SSSCEEEEC---CHHHHHHTTCSS-SEEEEE
T ss_pred ccceecCCHHHHHHHHhcCCcEEEEEEcCCCchH---HHHHHHHHhcC-CCceEEEEC---cHHHHHHhCCCC-CeEEEE
Confidence 355666 558899999889999999998766554 56899999998 478887554 789999999998 999999
Q ss_pred eC-CeEEEEeeCCCCHHHHHHHHHHHhCCCceecCCHHHHHHhhcc-CCeEEEEEecCCCCcc---HHHHHHHh-ccCCc
Q 021976 135 VA-GVRQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTV-ESKLVLGFLHDLEGME---SEELAAAS-KLHSD 208 (304)
Q Consensus 135 ~~-g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~-~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~ 208 (304)
++ ......|.|..+.+.|.+|+.....+.+.+++. +++..+..+ ...+++.|+.+||.++ ...+..+| .++++
T Consensus 89 k~f~~~~~~~~g~~~~~~i~~fi~~~~~p~v~~~~~-~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~ 167 (361)
T 3uem_A 89 KKFDEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTE-QTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK 167 (361)
T ss_dssp ESSTTSEEECCSCCCHHHHHHHHHHHSSCSEEECST-TTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT
T ss_pred EecCCCccccCCcCCHHHHHHHHHHcCCCcceecCc-ccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCc
Confidence 84 235678899999999999999999999999865 445555544 4567888999998874 45566777 68888
Q ss_pred eeEEEe-----cCHHHHhhcCCCCCCCCCeEEEEecCCCceeccc---CCCCHHHHHHHHhcCC----------------
Q 021976 209 VNFYQT-----TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFR---HQFTRLAIANFVTHTK---------------- 264 (304)
Q Consensus 209 ~~f~~~-----~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~---g~~~~~~i~~fi~~~~---------------- 264 (304)
+.|+.+ .++.+++.||++. .++|++++++.++ ....|. |.++.++|.+|+.+..
T Consensus 168 i~f~~vd~~~~~~~~~~~~fgi~~-~~~P~~~~~~~~~-~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~ 245 (361)
T 3uem_A 168 ILFIFIDSDHTDNQRILEFFGLKK-EECPAVRLITLEE-EMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPED 245 (361)
T ss_dssp CEEEEECTTSGGGHHHHHHTTCCT-TTCSEEEEEECC---CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTT
T ss_pred eEEEEecCChHHHHHHHHHcCCCc-cCCccEEEEEcCC-cccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcc
Confidence 888864 2678999999972 3489999998754 333443 7899999999998631
Q ss_pred --CCcEEeeCccchhhhhc
Q 021976 265 --HPLVVTLTIHNAQFVFQ 281 (304)
Q Consensus 265 --~p~~~~l~~~~~~~~~~ 281 (304)
-..+..++..++.++..
T Consensus 246 ~~~~~v~~l~~~~f~~~~~ 264 (361)
T 3uem_A 246 WDKQPVKVLVGKNFEDVAF 264 (361)
T ss_dssp TTTSSSEEECTTTHHHHHT
T ss_pred cccCCcEEeecCchhhhcc
Confidence 12366777777777763
No 117
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.55 E-value=6e-19 Score=133.04 Aligned_cols=99 Identities=20% Similarity=0.331 Sum_probs=86.6
Q ss_pred hhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHH---HHHHHHhhCCcEEEEEeCc--ccHHHHHhCCCccccEEEEE--e
Q 021976 63 GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAY--LEKDLAKEYNILAYPTLYLF--V 135 (304)
Q Consensus 63 ~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~--~ 135 (304)
++.+.....++++++|+|||+||++|+.+.|.+ +++++.+++++.++.||++ ++.+++++|+|.++||+++| +
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~ 88 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPK 88 (130)
Confidence 345555556789999999999999999999999 9999988877999999994 66889999999999999999 5
Q ss_pred CCeE--EEEeeCCCCHHHHHHHHHHHhC
Q 021976 136 AGVR--QFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 136 ~g~~--~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
+|+. +.++.|..+.+.+.++|++.++
T Consensus 89 ~G~~~~~~~~~G~~~~~~l~~~l~~~~~ 116 (130)
T 2lst_A 89 AGAWEEVGRLFGSRPRAEFLKELRQVCV 116 (130)
Confidence 6877 7889999999999999988774
No 118
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.70 E-value=7.9e-17 Score=121.95 Aligned_cols=100 Identities=17% Similarity=0.311 Sum_probs=84.8
Q ss_pred EEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcc----------------------c
Q 021976 59 VSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL----------------------E 116 (304)
Q Consensus 59 ~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~----------------------~ 116 (304)
.+++++.+.....++++++|.||++||++|+++.|.+++++++++ ++.++.|+++. +
T Consensus 10 ~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~ 88 (136)
T 1lu4_A 10 TTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDAD 88 (136)
T ss_dssp EBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTT
T ss_pred ecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCc
Confidence 334444443222367899999999999999999999999999998 89999999987 6
Q ss_pred HHHHHhCCCccccEEEEEe-CCeEEEEee---CCCCHHHHHHHHHHHh
Q 021976 117 KDLAKEYNILAYPTLYLFV-AGVRQFQFF---GERTRDVISAWVREKM 160 (304)
Q Consensus 117 ~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~---g~~~~~~l~~~i~~~~ 160 (304)
.+++++|++.++|++++++ +|+.. ++. |..+.+++.+++++.+
T Consensus 89 ~~~~~~~~i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 89 GVIWARYNVPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp SHHHHHTTCCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred hhHHHhcCCCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 7899999999999999996 88777 999 9999999999998754
No 119
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.70 E-value=1.9e-16 Score=121.56 Aligned_cols=103 Identities=17% Similarity=0.258 Sum_probs=90.4
Q ss_pred EEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeC-------------------------
Q 021976 59 VSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA------------------------- 113 (304)
Q Consensus 59 ~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~------------------------- 113 (304)
..++++.+.....++++++|.||++||++|+.+.|.+.++++++++++.++.|++
T Consensus 15 ~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (148)
T 2b5x_A 15 AWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPI 94 (148)
T ss_dssp EEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCE
T ss_pred ccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcce
Confidence 4567777765555789999999999999999999999999999987799999995
Q ss_pred --cccHHHHHhCCCccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 114 --YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 114 --~~~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
+.+..++++|+|.++|++++++ +|+.+.++.|..+.+++.++|++.+.
T Consensus 95 ~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 95 FVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp EECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHT
T ss_pred EECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHh
Confidence 4456899999999999999995 89888999999999999999998875
No 120
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.70 E-value=1.6e-16 Score=120.04 Aligned_cols=102 Identities=18% Similarity=0.264 Sum_probs=86.0
Q ss_pred cEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcc----------------------
Q 021976 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL---------------------- 115 (304)
Q Consensus 58 v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~---------------------- 115 (304)
+.+++++.+.....++++++|.||++||++|+.+.|.+.+++++++ ++.++.|+++.
T Consensus 10 ~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d 88 (136)
T 1zzo_A 10 AKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLAD 88 (136)
T ss_dssp EEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEEC
T ss_pred cccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEc
Confidence 3444455444333467899999999999999999999999999998 89999999854
Q ss_pred -cHHHHHhCCCccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 116 -EKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 116 -~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
+..++++|||.++|++++++ +|+.+ ++.|..+.+++.+++.+.+.
T Consensus 89 ~~~~~~~~~~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 89 TDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp TTCHHHHHTTCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC-
T ss_pred CCcHHHHHcCCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHHhc
Confidence 56789999999999999996 88777 99999999999999988763
No 121
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.69 E-value=1.2e-17 Score=121.03 Aligned_cols=75 Identities=21% Similarity=0.313 Sum_probs=64.8
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCc------ccHHHHHhCCCccccEEEEEeCCeEEEEeeC
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------LEKDLAKEYNILAYPTLYLFVAGVRQFQFFG 145 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~------~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g 145 (304)
.+++++|+|||+||++|+++.|.|++++++++ .|||+ ++++++++|||.++||+++ +|+ .|.|
T Consensus 11 ~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~---~~~G 79 (106)
T 3kp8_A 11 LRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR---TYTG 79 (106)
T ss_dssp HHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTE---EEES
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchhHHHHHHcCCeEeCEEEE--CCE---EecC
Confidence 35677999999999999999999999987664 56666 6789999999999999877 885 3899
Q ss_pred CCCHHHHHHHHH
Q 021976 146 ERTRDVISAWVR 157 (304)
Q Consensus 146 ~~~~~~l~~~i~ 157 (304)
..+.++|.+|+.
T Consensus 80 ~~~~~~l~~~~~ 91 (106)
T 3kp8_A 80 VRSLEALAVASG 91 (106)
T ss_dssp CCCHHHHHHHHT
T ss_pred CCCHHHHHHHhC
Confidence 999999999874
No 122
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.69 E-value=3e-16 Score=131.07 Aligned_cols=100 Identities=16% Similarity=0.139 Sum_probs=85.6
Q ss_pred cChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhh----CCcEEEEEeCcccHHHHHhCCCccccEEEEEe
Q 021976 61 LNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK----GEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (304)
Q Consensus 61 l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~----~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (304)
++++.++.+. ..++.+++.|||+||++|+++.|.|++++..++ +++.++.||++++++++++|+|.++||+++
T Consensus 125 l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i-- 202 (243)
T 2hls_A 125 LEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI-- 202 (243)
T ss_dssp CCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE--
T ss_pred CCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE--
Confidence 4555555444 246778999999999999999999999999983 479999999999999999999999999988
Q ss_pred CCeEEEEeeCCCCHHHHHHHHHHHhCCCc
Q 021976 136 AGVRQFQFFGERTRDVISAWVREKMTLGT 164 (304)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~~~~~ 164 (304)
+|+. .|.|.++.++|.+++.+.++...
T Consensus 203 ~G~~--~~~G~~~~~~l~~~l~~~~~~~~ 229 (243)
T 2hls_A 203 NGYL--VFVGVPYEEDFLDYVKSAAEGRL 229 (243)
T ss_dssp TTEE--EEESCCCHHHHHHHHHHHHTTCC
T ss_pred CCEE--EEeCCCCHHHHHHHHHHHhhccc
Confidence 8864 39999999999999999986543
No 123
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.67 E-value=1.7e-17 Score=130.25 Aligned_cols=97 Identities=19% Similarity=0.312 Sum_probs=82.7
Q ss_pred hcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHH-HHHhCCC--ccccEEEEE-eCCeE
Q 021976 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKD-LAKEYNI--LAYPTLYLF-VAGVR 139 (304)
Q Consensus 64 ~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~-~~~~~~v--~~~Pt~~~~-~~g~~ 139 (304)
+.++....++++++|+|||+||++|+.+.|.++++++.++.++.|+.||++.++. ++.+|++ .++||+++| .+|+.
T Consensus 37 ~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~ 116 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKV 116 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCB
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCE
Confidence 5666666788999999999999999999999999887765567788899988877 7889988 669999999 58988
Q ss_pred EEEeeCC----------CCHHHHHHHHHHHh
Q 021976 140 QFQFFGE----------RTRDVISAWVREKM 160 (304)
Q Consensus 140 ~~~~~g~----------~~~~~l~~~i~~~~ 160 (304)
+.++.|. .+.+++.++|++.+
T Consensus 117 ~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 117 HPEIINENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp CTTCCCTTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred EEEEeCCCCccchhcccCCHHHHHHHHHHHH
Confidence 8888884 78899999998775
No 124
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.67 E-value=7.1e-16 Score=120.76 Aligned_cols=106 Identities=22% Similarity=0.326 Sum_probs=88.6
Q ss_pred cEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcccHHHHHhC-------------
Q 021976 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKDLAKEY------------- 123 (304)
Q Consensus 58 v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~------------- 123 (304)
+.+++++.+.....++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.+.+.++++
T Consensus 19 l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~ 98 (165)
T 3or5_A 19 GVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMA 98 (165)
T ss_dssp EECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEEC
T ss_pred eeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEec
Confidence 33444444443333679999999999999999999999999999987 5999999999887777666
Q ss_pred --------------CCccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhCCC
Q 021976 124 --------------NILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTLG 163 (304)
Q Consensus 124 --------------~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (304)
++.++|++++++ +|+.+..+.|..+.+++.++|++.+...
T Consensus 99 ~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~ 153 (165)
T 3or5_A 99 TPELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGAK 153 (165)
T ss_dssp CHHHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC--
T ss_pred CHHHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhhh
Confidence 899999999995 8988899999999999999999988533
No 125
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.67 E-value=3.4e-16 Score=122.51 Aligned_cols=105 Identities=21% Similarity=0.270 Sum_probs=88.2
Q ss_pred CcEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeC----------------------
Q 021976 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDA---------------------- 113 (304)
Q Consensus 57 ~v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~---------------------- 113 (304)
.+.+++++.+.....++++++|+||++||++|+.+.|.+++++++++. ++.++.|++
T Consensus 22 ~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~ 101 (164)
T 2h30_A 22 TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYP 101 (164)
T ss_dssp TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCT
T ss_pred ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCC
Confidence 566677777765556789999999999999999999999999998754 566665553
Q ss_pred ------cccHHHHHhCCCccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 114 ------YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 114 ------~~~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
+.+.+++++|+|.++|++++++ +|+.+.++.|..+.+++.++|++.+.
T Consensus 102 ~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 102 KLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp TSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred cceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3456789999999999999995 89889999999999999999988764
No 126
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.67 E-value=4.7e-16 Score=120.15 Aligned_cols=92 Identities=18% Similarity=0.211 Sum_probs=81.7
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc------------------------cHHHHHhCC--
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL------------------------EKDLAKEYN-- 124 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~------------------------~~~~~~~~~-- 124 (304)
++++++|+||++||++|+.+.|.+.++++++++ ++.++.|+++. ...++++||
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 689999999999999999999999999999955 79999999863 345788899
Q ss_pred CccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhCCC
Q 021976 125 ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTLG 163 (304)
Q Consensus 125 v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (304)
+.++|++++++ +|+.+.++.|..+.+++.++|++.....
T Consensus 103 v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~ 142 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSKC 142 (151)
T ss_dssp SCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC-
T ss_pred cCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 99999999996 8989999999999999999999887543
No 127
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.66 E-value=8.3e-16 Score=118.69 Aligned_cols=92 Identities=23% Similarity=0.366 Sum_probs=82.9
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc----------------------cHHHHHhCCCccc
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------EKDLAKEYNILAY 128 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~----------------------~~~~~~~~~v~~~ 128 (304)
++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++. +..+++.|+|.++
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 104 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPL 104 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCC
Confidence 678999999999999999999999999999986 69999999876 3478999999999
Q ss_pred cEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhCCC
Q 021976 129 PTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTLG 163 (304)
Q Consensus 129 Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (304)
|++++++ +|+.+..+.|..+.+.+.++|.+.+...
T Consensus 105 P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 105 PTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp CEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC-
T ss_pred CeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhh
Confidence 9999995 8988999999999999999999887544
No 128
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.65 E-value=5.9e-16 Score=105.31 Aligned_cols=74 Identities=22% Similarity=0.286 Sum_probs=66.0
Q ss_pred EEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEeCCeEEEEeeCCC-CHHHHHH
Q 021976 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGER-TRDVISA 154 (304)
Q Consensus 76 ~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~-~~~~l~~ 154 (304)
..|.|||+||++|+++.|.++++++++++++.++.+| +.+++++|||.++||+++ +|+.+.+ |.. +.+++.+
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v~~~Pt~~~--~G~~~~~--G~~~~~~~l~~ 74 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---EMDQILEAGLTALPGLAV--DGELKIM--GRVASKEEIKK 74 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTCSSSSCEEE--TTEEEEC--SSCCCHHHHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---CHHHHHHCCCCcCCEEEE--CCEEEEc--CCCCCHHHHHH
Confidence 3589999999999999999999999998788999998 788999999999999988 8866554 887 8999988
Q ss_pred HH
Q 021976 155 WV 156 (304)
Q Consensus 155 ~i 156 (304)
++
T Consensus 75 ~l 76 (77)
T 1ilo_A 75 IL 76 (77)
T ss_dssp HC
T ss_pred Hh
Confidence 75
No 129
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.64 E-value=1.9e-15 Score=117.72 Aligned_cols=91 Identities=14% Similarity=0.257 Sum_probs=80.9
Q ss_pred CCCcEEEEEEcCCChhhhhh-HHHHHHHHHHhhC-CcEEEEEeC----------------------------cccHH---
Q 021976 72 KNRNVMVMFYANWCYWSKKL-APEFAAAAKMLKG-EADLVMVDA----------------------------YLEKD--- 118 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~-~~~~~~~~~~~~~-~~~~~~vd~----------------------------~~~~~--- 118 (304)
++++++|+||++||++|+.+ .|.+.++++++++ ++.++.|++ +....
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 58999999999999999995 9999999999986 699999986 22334
Q ss_pred ---HHHhCCCccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhCC
Q 021976 119 ---LAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTL 162 (304)
Q Consensus 119 ---~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (304)
++++|||.++|++++++ +|+.+.++.|..+.+.+.+.|++.+..
T Consensus 109 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 109 IPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred hhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 89999999999999997 899999999999999999999988753
No 130
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.64 E-value=1.6e-15 Score=115.97 Aligned_cols=85 Identities=27% Similarity=0.502 Sum_probs=78.2
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhh-CCcEEEEEeCcc-------------------------cHHHHHhCCC
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK-GEADLVMVDAYL-------------------------EKDLAKEYNI 125 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~-~~~~~~~vd~~~-------------------------~~~~~~~~~v 125 (304)
++++++|.||++||++|+.+.|.+.+++++++ .++.++.|+++. +..++++|+|
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 67899999999999999999999999999998 489999999864 5689999999
Q ss_pred ccccEEEEEe-CCeEEEEeeCCCCHHHHHHHH
Q 021976 126 LAYPTLYLFV-AGVRQFQFFGERTRDVISAWV 156 (304)
Q Consensus 126 ~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i 156 (304)
.++|++++++ +|+.+..+.|..+.+++.++|
T Consensus 113 ~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 113 ITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp CEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred CccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 9999999995 898889999999999999887
No 131
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.64 E-value=2.3e-15 Score=117.00 Aligned_cols=91 Identities=12% Similarity=0.174 Sum_probs=80.8
Q ss_pred CCCcEEEEEEcCCChhhhhh-HHHHHHHHHHhhC-CcEEEEEeCc----------------------------ccH----
Q 021976 72 KNRNVMVMFYANWCYWSKKL-APEFAAAAKMLKG-EADLVMVDAY----------------------------LEK---- 117 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~-~~~~~~~~~~~~~-~~~~~~vd~~----------------------------~~~---- 117 (304)
++++++|+||++||++|+.+ .|.+.++++++++ ++.++.|+++ .+.
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 58999999999999999996 9999999999985 7999999863 122
Q ss_pred -HHHHhCCCccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhCC
Q 021976 118 -DLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTL 162 (304)
Q Consensus 118 -~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (304)
.+++.|||.++|++++++ +|+.+.++.|..+.+++.+.|++.+..
T Consensus 107 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 107 PRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred HHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 589999999999999996 899999999999999999999988754
No 132
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.63 E-value=2e-15 Score=116.86 Aligned_cols=88 Identities=16% Similarity=0.271 Sum_probs=81.1
Q ss_pred CcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeC---------------------------cccHHHHHhCCCc
Q 021976 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA---------------------------YLEKDLAKEYNIL 126 (304)
Q Consensus 74 ~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~---------------------------~~~~~~~~~~~v~ 126 (304)
++++|.||++||++|+.+.|.+.++++++ ++.++.|++ +.+..++++||+.
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 108 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVL 108 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBC
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCC
Confidence 89999999999999999999999999999 788999998 4678899999999
Q ss_pred cccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhCCC
Q 021976 127 AYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTLG 163 (304)
Q Consensus 127 ~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (304)
++|++++++ +|+.+..+.|..+.+++.++|+++....
T Consensus 109 ~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 109 GQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp SSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC
T ss_pred cccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCcc
Confidence 999999996 8999999999999999999999988654
No 133
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.63 E-value=7.9e-16 Score=120.62 Aligned_cols=95 Identities=13% Similarity=0.083 Sum_probs=75.6
Q ss_pred EcChhcHHHHh-cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCC---CccccEEEEEe
Q 021976 60 SLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYN---ILAYPTLYLFV 135 (304)
Q Consensus 60 ~l~~~~~~~~~-~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~---v~~~Pt~~~~~ 135 (304)
.++++.+..+. .++++++|+|||+||++|+.+.|.++++++.++ ++.+..||.+++++++++|+ +.++||+++++
T Consensus 40 ~~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~ 118 (167)
T 1z6n_A 40 GLPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGRAEDDLRQRLALERIAIPLVLVLD 118 (167)
T ss_dssp CCCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEEC
T ss_pred CCCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEEC
Confidence 45555555443 257899999999999999999999999999886 79999999999999999997 99999999999
Q ss_pred C-CeEEEEeeCCCCHHHHHHHHH
Q 021976 136 A-GVRQFQFFGERTRDVISAWVR 157 (304)
Q Consensus 136 ~-g~~~~~~~g~~~~~~l~~~i~ 157 (304)
+ |+.+.++ |.... .+.+.+.
T Consensus 119 ~~G~~~~~~-g~~p~-~~~~~i~ 139 (167)
T 1z6n_A 119 EEFNLLGRF-VERPQ-AVLDGGP 139 (167)
T ss_dssp TTCCEEEEE-ESSCH-HHHHHCH
T ss_pred CCCCEEEEE-cCCCH-HHHHhHH
Confidence 6 5776666 54443 3334433
No 134
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.63 E-value=1e-15 Score=118.20 Aligned_cols=92 Identities=16% Similarity=0.247 Sum_probs=83.7
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcccH-----------------------HHHHhCCCcc
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEK-----------------------DLAKEYNILA 127 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~-----------------------~~~~~~~v~~ 127 (304)
++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.+. +++++|+|.+
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 578999999999999999999999999999987 6999999998765 7899999999
Q ss_pred ccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhCCC
Q 021976 128 YPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTLG 163 (304)
Q Consensus 128 ~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (304)
+|++++++ +|+.+.++.|..+.+++.++|.+.....
T Consensus 109 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 109 IPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp SCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTCC
T ss_pred CCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhccc
Confidence 99999998 8988888999999999999999887543
No 135
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.63 E-value=2.3e-15 Score=113.72 Aligned_cols=88 Identities=23% Similarity=0.310 Sum_probs=78.6
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeC----------------------------cccHHHHHhC
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA----------------------------YLEKDLAKEY 123 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~----------------------------~~~~~~~~~~ 123 (304)
++++++|.||++||++|+.+.|.+.++++++++++.++.|++ +.+..++++|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 689999999999999999999999999999877889998853 3355789999
Q ss_pred CCccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHH
Q 021976 124 NILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREK 159 (304)
Q Consensus 124 ~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~ 159 (304)
|+.++|++++++ +|+.+.++.|..+.+++.++|++.
T Consensus 101 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 101 GVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp TCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred CcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 999999999995 898899999999999999998753
No 136
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.62 E-value=1.4e-15 Score=116.75 Aligned_cols=89 Identities=13% Similarity=0.212 Sum_probs=79.4
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcccHH-------------------------HHHhCCC
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKD-------------------------LAKEYNI 125 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~-------------------------~~~~~~v 125 (304)
++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.+.+ +++.|+|
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 109 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI 109 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCc
Confidence 679999999999999999999999999999987 59999999997766 9999999
Q ss_pred ccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 126 LAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 126 ~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
.++|++++++ +|+.+.++.|..+.+.+.+.+.+.+
T Consensus 110 ~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 110 YATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp CSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHHh
Confidence 9999999995 8988899999877777777776543
No 137
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.61 E-value=8.2e-16 Score=120.69 Aligned_cols=83 Identities=18% Similarity=0.274 Sum_probs=71.8
Q ss_pred EcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHH-H--HHHHHHhhCCcEEEEEeCcccHHHHHhC--------CCccc
Q 021976 60 SLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPE-F--AAAAKMLKGEADLVMVDAYLEKDLAKEY--------NILAY 128 (304)
Q Consensus 60 ~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~-~--~~~~~~~~~~~~~~~vd~~~~~~~~~~~--------~v~~~ 128 (304)
...++.|+....+++++||+|||+||++|+.+.|. | .++++.+++++.+++||.++.+++.+.| |+.++
T Consensus 26 ~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~ 105 (173)
T 3ira_A 26 PWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGGW 105 (173)
T ss_dssp CSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSCCCS
T ss_pred CcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCCCCC
Confidence 34567888888889999999999999999999983 3 5777777767999999999999999988 99999
Q ss_pred cEEEEEe-CCeEEEE
Q 021976 129 PTLYLFV-AGVRQFQ 142 (304)
Q Consensus 129 Pt~~~~~-~g~~~~~ 142 (304)
||+++++ +|+.+..
T Consensus 106 Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 106 PLNIIMTPGKKPFFA 120 (173)
T ss_dssp SEEEEECTTSCEEEE
T ss_pred cceeeECCCCCceee
Confidence 9999998 8876654
No 138
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.61 E-value=9.7e-16 Score=117.85 Aligned_cols=95 Identities=12% Similarity=0.094 Sum_probs=69.3
Q ss_pred cHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHH---HHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEe-CCeEE
Q 021976 65 NFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAA---KMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV-AGVRQ 140 (304)
Q Consensus 65 ~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~---~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~-~g~~~ 140 (304)
.+..+..++++++|+|||+||++|+.+.|.+.+.. +..+..+..+.+| ++..+.+.++++.++||+++|+ +|+.+
T Consensus 36 al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD-~e~~~~~~~~~v~~~PT~~f~~~~G~~v 114 (151)
T 3ph9_A 36 GLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLM-HETTDKNLSPDGQYVPRIMFVDPSLTVR 114 (151)
T ss_dssp HHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEES-SCCSCGGGCTTCCCSSEEEEECTTSCBC
T ss_pred HHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEec-CCchhhHhhcCCCCCCEEEEECCCCCEE
Confidence 34455567899999999999999999999998643 2222144444444 2345668899999999999999 99888
Q ss_pred EEeeCC-------CC---HHHHHHHHHHHh
Q 021976 141 FQFFGE-------RT---RDVISAWVREKM 160 (304)
Q Consensus 141 ~~~~g~-------~~---~~~l~~~i~~~~ 160 (304)
.+..|. +. .+++.+.+++.+
T Consensus 115 ~~~~G~~~~~~~~~~~~~~~~ll~~~~~al 144 (151)
T 3ph9_A 115 ADIAGRYSNRLYTYEPRDLPLLIENMKKAL 144 (151)
T ss_dssp TTCCCSCTTSTTCCCGGGHHHHHHHHHHHH
T ss_pred EEEeCCcCCcccccchhhHHHHHHHHHHHH
Confidence 888887 43 445555555544
No 139
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.61 E-value=1.2e-13 Score=121.68 Aligned_cols=198 Identities=11% Similarity=0.098 Sum_probs=150.0
Q ss_pred CCcEEcC-hhcHHHHhc-CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEE
Q 021976 56 KDVVSLN-GKNFSEFMG-KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (304)
Q Consensus 56 ~~v~~l~-~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (304)
..+..++ .+++++.+. +++.++|.|+++||.+ ..+.|.++|+.+.+.+.|+.++ ++++++++++. +|++++
T Consensus 123 ~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~~---~~~~~~~~A~~~~~~~~f~~~~---~~~~~~~~~v~-~p~i~~ 195 (350)
T 1sji_A 123 DPVEIINSKLEVQAFERIEDQIKLIGFFKSEESE---YYKAFEEAAEHFQPYIKFFATF---DKGVAKKLSLK-MNEVDF 195 (350)
T ss_dssp CSEEECCSHHHHHHHHHCCSSCEEEEECSCTTSH---HHHHHHHHHHHTTTTSEEEEEC---CHHHHHHHTCC-TTCEEE
T ss_pred CcceeccchHHHHHHhccCCCcEEEEEECCCCcH---HHHHHHHHHHhhccCcEEEEEC---CHHHHHHcCCC-CCcEEE
Confidence 4566774 678888887 7788999999998654 5689999999998889999885 56799999999 999999
Q ss_pred EeC-CeEEEEeeCC-CCHHHHHHHHHHHhCCCceecCCHHHHHHhhccC--CeEEEEEecCCCC---ccHHHHHHHh-cc
Q 021976 134 FVA-GVRQFQFFGE-RTRDVISAWVREKMTLGTYSITTTDEAERILTVE--SKLVLGFLHDLEG---MESEELAAAS-KL 205 (304)
Q Consensus 134 ~~~-g~~~~~~~g~-~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~--~~~~v~f~~~~~~---~~~~~~~~~a-~~ 205 (304)
|++ ++....|.|. .+.+.|.+|+.++..+.+.+++.. ++..+.++. ...++.|..+++. ...+.+..+| ++
T Consensus 196 ~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~-~~~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~ 274 (350)
T 1sji_A 196 YEPFMDEPIAIPDKPYTEEELVEFVKEHQRPTLRRLRPE-DMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARDN 274 (350)
T ss_dssp ECTTCSSCEECSSSSCCHHHHHHHHHHHCCCSEEECCTT-THHHHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHG
T ss_pred EeCCCCCceecCCCCCCHHHHHHHHHHcCccchhhcChh-hHHHHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHh
Confidence 985 3456789997 999999999999999999999654 455566542 4455667666553 2455566677 46
Q ss_pred CC--ceeEEEec---CHHHH----hhcCCCCCCCCCeEEEEecCCC-ceec-cc---CCCCHHHHHHHHhcC
Q 021976 206 HS--DVNFYQTT---SADVA----EFFHIHPKSKRPALIFLHLEAG-KATP-FR---HQFTRLAIANFVTHT 263 (304)
Q Consensus 206 ~~--~~~f~~~~---~~~l~----~~~~i~~~~~~P~lv~~~~~~~-~~~~-y~---g~~~~~~i~~fi~~~ 263 (304)
++ ++.|+.+. .+.++ +.||+.. ++|++++++..++ ++.. +. |.++.++|.+|++.-
T Consensus 275 ~~~~~~~f~~id~~~~~~~~~~~~~~~gi~~--~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~ 344 (350)
T 1sji_A 275 TDNPDLSIVWIDPDDFPLLVAYWEKTFKIDL--FKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDV 344 (350)
T ss_dssp GGCSSCCEEEECGGGCHHHHHHHHHHCCSCT--TSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHH
T ss_pred CCCCceEEEEECchhhHHHHHHHHhhcCCCc--cCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHH
Confidence 54 78888663 34455 7899983 5899999987544 3322 43 578999999999863
No 140
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.61 E-value=9.3e-15 Score=112.76 Aligned_cols=91 Identities=19% Similarity=0.300 Sum_probs=80.4
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcccH----------------------HHHHhCCCccc
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEK----------------------DLAKEYNILAY 128 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~----------------------~~~~~~~v~~~ 128 (304)
++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.+. .+++.|++.++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 106 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGM 106 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCC
Confidence 678999999999999999999999999999987 5999999998665 67889999999
Q ss_pred cEEEEEe-CCeEEEEeeCCC--CHHHHHHHHHHHhCC
Q 021976 129 PTLYLFV-AGVRQFQFFGER--TRDVISAWVREKMTL 162 (304)
Q Consensus 129 Pt~~~~~-~g~~~~~~~g~~--~~~~l~~~i~~~~~~ 162 (304)
|++++++ +|+.+.++.|.. +.+++.++|++.+..
T Consensus 107 P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~ 143 (152)
T 3gl3_A 107 PTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGG 143 (152)
T ss_dssp SEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC-
T ss_pred CeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHcc
Confidence 9999995 898889999864 558999999988754
No 141
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.60 E-value=3.6e-15 Score=115.23 Aligned_cols=91 Identities=15% Similarity=0.203 Sum_probs=80.9
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeC-----------------------cccHHHHHhCCCcc
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDA-----------------------YLEKDLAKEYNILA 127 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~-----------------------~~~~~~~~~~~v~~ 127 (304)
++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+. +.+..+++.|||.+
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 106 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV 106 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc
Confidence 689999999999999999999999999999987 588887763 45667999999999
Q ss_pred ccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhCC
Q 021976 128 YPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTL 162 (304)
Q Consensus 128 ~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (304)
+|++++++ +|+.+..+.|..+.+.+.++|.+.+..
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 142 (153)
T 2l5o_A 107 YPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRN 142 (153)
T ss_dssp SSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHC
T ss_pred cCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 99999995 898888999999999999999988753
No 142
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.60 E-value=9.1e-15 Score=120.84 Aligned_cols=122 Identities=15% Similarity=0.207 Sum_probs=110.8
Q ss_pred CCceecCCHHHHHHhhccCCeEEEEEecCCCCccHHHHHHHhccCCceeEEEecCHHHHhhcCCCCCCCCCeEEEEecCC
Q 021976 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEA 241 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~~~~l~~~~~i~~~~~~P~lv~~~~~~ 241 (304)
..+.++++.+++++++++++.++|+||.++|++.++.|..+|....++.|+++.+++++++++++ .|++++|++.+
T Consensus 9 ~~~~~l~s~~~~~~~l~~~~v~vVgff~~~~~~~~~~f~~~A~~l~~~~F~~t~~~~v~~~~~v~----~p~i~lfk~~~ 84 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKFPGVSFGISTDSEVLTHYNIT----GNTICLFRLVD 84 (227)
T ss_dssp CCCEECCSHHHHHHHHHTSSEEEEEECSCSCSTHHHHHHHHTTTCTTSEEEEECCHHHHHHTTCC----SSEEEEEETTT
T ss_pred CCCeeeCCHHHHHHHHhcCCeEEEEEecCCCchhHHHHHHHHHhCCCceEEEECCHHHHHHcCCC----CCeEEEEEecC
Confidence 45778899999999999999999999999999999999999953369999999999999999998 39999999877
Q ss_pred CceecccC----CCCHHHHHHHHhcCCCCcEEeeCccchhhhhcCCCC-ee
Q 021976 242 GKATPFRH----QFTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPRK-QV 287 (304)
Q Consensus 242 ~~~~~y~g----~~~~~~i~~fi~~~~~p~~~~l~~~~~~~~~~~~~~-~~ 287 (304)
+.+..|+| .++.++|.+||..++.|++.+++.+|+..+++++++ ++
T Consensus 85 ~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~ 135 (227)
T 4f9z_D 85 NEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHL 135 (227)
T ss_dssp TEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEE
T ss_pred cccccccccccCCCCHHHHHHHHHHhCCCceeecCcccHHHHhccCCceEE
Confidence 77888885 789999999999999999999999999999999888 53
No 143
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.60 E-value=5.5e-15 Score=114.25 Aligned_cols=87 Identities=22% Similarity=0.320 Sum_probs=75.8
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc-------------------------cHHHHHhCCC
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------------------------EKDLAKEYNI 125 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------------------------~~~~~~~~~v 125 (304)
++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++. +..++++|||
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 678999999999999999999999999999987 59999999987 5788999999
Q ss_pred ccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 126 LAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 126 ~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
.++|++++++ +|+.+.++. +.+++.++|++.+.
T Consensus 108 ~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 108 VGFPHIILVDPEGKIVAKEL---RGDDLYNTVEKFVN 141 (152)
T ss_dssp CSSCEEEEECTTSEEEEECC---CTTHHHHHHHHHHT
T ss_pred CcCCeEEEECCCCeEEEeeC---CHHHHHHHHHHHHh
Confidence 9999999995 898777764 44678888877664
No 144
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.60 E-value=7.3e-15 Score=114.34 Aligned_cols=103 Identities=17% Similarity=0.324 Sum_probs=83.0
Q ss_pred EEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc-------------------cHH
Q 021976 59 VSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------------------EKD 118 (304)
Q Consensus 59 ~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------------------~~~ 118 (304)
.+++++.+...-.++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++. +.+
T Consensus 27 ~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~ 106 (158)
T 3hdc_A 27 PTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQ 106 (158)
T ss_dssp ECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSH
T ss_pred EcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHH
Confidence 3344444432223678999999999999999999999999999984 89999999987 678
Q ss_pred HHHhCCCccccEEEEEe-CCeEEEEeeCC--CCHHHHHHHHHHHhC
Q 021976 119 LAKEYNILAYPTLYLFV-AGVRQFQFFGE--RTRDVISAWVREKMT 161 (304)
Q Consensus 119 ~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~--~~~~~l~~~i~~~~~ 161 (304)
++++|+|.++|++++++ +|+.+.++.|. .+.+++.+.+.+...
T Consensus 107 ~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~ 152 (158)
T 3hdc_A 107 VQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEG 152 (158)
T ss_dssp HHHHTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC-
T ss_pred HHHHhCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhcc
Confidence 99999999999988886 89899999996 445677777766543
No 145
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.59 E-value=1e-14 Score=122.26 Aligned_cols=122 Identities=19% Similarity=0.259 Sum_probs=109.2
Q ss_pred HhCCCceecCCHHHHHHhhcc-CCeEEEEEecCCCCccHHHHHHHh-ccCCceeEEEecCHHHHhhcCCCCCCCCCeEEE
Q 021976 159 KMTLGTYSITTTDEAERILTV-ESKLVLGFLHDLEGMESEELAAAS-KLHSDVNFYQTTSADVAEFFHIHPKSKRPALIF 236 (304)
Q Consensus 159 ~~~~~~~~l~~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~a-~~~~~~~f~~~~~~~l~~~~~i~~~~~~P~lv~ 236 (304)
+++|++..+++.+++++++++ ++.++|+||++++++.++.|..+| .+++++.|+.+.+++++++++++ .|++++
T Consensus 3 ~~gP~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~t~~~~v~~~~~v~----~p~ivl 78 (250)
T 3ec3_A 3 LGSPPSKEILTLKQVQEFLKDGDDVVILGVFQGVGDPGYLQYQDAANTLREDYKFHHTFSTEIAKFLKVS----LGKLVL 78 (250)
T ss_dssp --CCSSEECCCHHHHHHHHHHCSSCEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEEECCHHHHHHHTCC----SSEEEE
T ss_pred CCCCCceecCCHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEEECcHHHHHHcCCC----CCeEEE
Confidence 467999999999999999998 999999999999999999999998 68899999999999999999998 499999
Q ss_pred EecC------CCceeccc--CCCCHHHHHHHHhcCCCCcEEeeCccchhhhhcCCCC
Q 021976 237 LHLE------AGKATPFR--HQFTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPRK 285 (304)
Q Consensus 237 ~~~~------~~~~~~y~--g~~~~~~i~~fi~~~~~p~~~~l~~~~~~~~~~~~~~ 285 (304)
|+++ +.....|+ |.++.++|.+||..+++|++.+++.+|+..++. +.+
T Consensus 79 fk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~-~~~ 134 (250)
T 3ec3_A 79 MQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRYS-KRP 134 (250)
T ss_dssp ECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHHSC-SSS
T ss_pred EecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCccchhhhhc-cCc
Confidence 9963 45678888 478999999999999999999999999999884 444
No 146
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.59 E-value=1.3e-14 Score=112.25 Aligned_cols=86 Identities=10% Similarity=0.032 Sum_probs=75.9
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcccHH-----------------------HHHhCCCcc
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKD-----------------------LAKEYNILA 127 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~-----------------------~~~~~~v~~ 127 (304)
++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++...+ ++++||+.+
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 113 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTN 113 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCccc
Confidence 578999999999999999999999999999987 69999999987654 889999999
Q ss_pred ccEEEEEe-CCeEEEEeeCCCCHHHHHHHHH
Q 021976 128 YPTLYLFV-AGVRQFQFFGERTRDVISAWVR 157 (304)
Q Consensus 128 ~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~ 157 (304)
+|++++++ +|+.+.++.|..+.++...-+.
T Consensus 114 ~P~~~lid~~G~i~~~~~g~~~~e~~~~~~~ 144 (152)
T 2lrt_A 114 LPSVFLVNRNNELSARGENIKDLDEAIKKLL 144 (152)
T ss_dssp CSEEEEEETTTEEEEETTTCSCHHHHHHHHH
T ss_pred CceEEEECCCCeEEEecCCHHHHHHHHHHHH
Confidence 99999997 8999999999888776655443
No 147
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.59 E-value=6e-15 Score=113.12 Aligned_cols=87 Identities=22% Similarity=0.389 Sum_probs=76.0
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHh-hC-CcEEEEEeCcc-------------------------cHHHHHhCC
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKML-KG-EADLVMVDAYL-------------------------EKDLAKEYN 124 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~-~~-~~~~~~vd~~~-------------------------~~~~~~~~~ 124 (304)
++++++|.||++||++|+.+.|.+.++++++ ++ ++.++.|+++. +..++++||
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 6799999999999999999999999999999 66 59999999886 348899999
Q ss_pred CccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 125 ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 125 v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
|.++|++++++ +|+.+.++. +.+.+.+.+.+.+.
T Consensus 112 v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 112 ILTLPTNILLSPTGKILARDI---QGEALTGKLKELLK 146 (148)
T ss_dssp CCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHC-
T ss_pred CCCcCEEEEECCCCeEEEecC---CHHHHHHHHHHHHc
Confidence 99999999995 887776665 88889999987763
No 148
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.59 E-value=1.3e-13 Score=122.14 Aligned_cols=199 Identities=11% Similarity=0.125 Sum_probs=150.2
Q ss_pred CCcEEcC-hhcHHHHhc-CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEE
Q 021976 56 KDVVSLN-GKNFSEFMG-KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (304)
Q Consensus 56 ~~v~~l~-~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (304)
..+..++ .+++++.+. ++++++|.|+++||. ...+.|.++|+.+.+.+.|+.++ +..++++|+++. |++++
T Consensus 125 ~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~f~~~A~~~~~~~~F~~~~---~~~~~~~~~v~~-p~i~l 197 (367)
T 3us3_A 125 DPVELIEGERELQAFENIEDEIKLIGYFKNKDS---EHYKAFKEAAEEFHPYIPFFATF---DSKVAKKLTLKL-NEIDF 197 (367)
T ss_dssp CSEEECCSHHHHHHHHHCCSSCEEEEECSCTTC---HHHHHHHHHHHHHTTTSCEEEEC---CHHHHHHHTCCT-TCEEE
T ss_pred CCcEEcCCHHHHHHHhccCCCcEEEEEECCCCc---hHHHHHHHHHHhhcCCcEEEEEC---CHHHHHHcCCCC-CeEEE
Confidence 4566774 578998887 678999999999865 56788999999998889999886 567899999995 99999
Q ss_pred EeCC-eEEEEeeCC-CCHHHHHHHHHHHhCCCceecCCHHHHHHhhcc-CCeEEEEEecCCCC---ccHHHHHHHh-ccC
Q 021976 134 FVAG-VRQFQFFGE-RTRDVISAWVREKMTLGTYSITTTDEAERILTV-ESKLVLGFLHDLEG---MESEELAAAS-KLH 206 (304)
Q Consensus 134 ~~~g-~~~~~~~g~-~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~-~~~~~v~f~~~~~~---~~~~~~~~~a-~~~ 206 (304)
|+++ +....|.|. ++.+.|.+|+..+..+.+.+++..+....+... ....++.|+..++. ...+.+..+| .++
T Consensus 198 f~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~ 277 (367)
T 3us3_A 198 YEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKPESMYETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQDNT 277 (367)
T ss_dssp ECTTCSSCEECSSSSCCHHHHHHHHHHTCSCSEEECCGGGHHHHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTT
T ss_pred EcCCCCCCeecCCCCCCHHHHHHHHHHcCccceeecChhhHHHHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcC
Confidence 9863 456789994 999999999999999999999654433433322 34567778776543 3455677777 566
Q ss_pred C--ceeEEEecCHH---H----HhhcCCCCCCCCCeEEEEecCCC--ceecccC---CCCHHHHHHHHhcC
Q 021976 207 S--DVNFYQTTSAD---V----AEFFHIHPKSKRPALIFLHLEAG--KATPFRH---QFTRLAIANFVTHT 263 (304)
Q Consensus 207 ~--~~~f~~~~~~~---l----~~~~~i~~~~~~P~lv~~~~~~~--~~~~y~g---~~~~~~i~~fi~~~ 263 (304)
+ ++.|..+...+ . .+.||+.. ++|++++++..++ +...+.+ .++.++|.+|++.-
T Consensus 278 ~~~ki~F~~id~~~~~~~l~~~~~~fgl~~--~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~ 346 (367)
T 3us3_A 278 DNPDLSIIWIDPDDFPLLVPYWEKTFDIDL--SAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDV 346 (367)
T ss_dssp TCTTCCEEEECGGGCTTTHHHHHHHHTCCT--TSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHH
T ss_pred CCCceEEEEECCccchhHHHHHHHhcCCCC--CCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHH
Confidence 6 68888764332 2 34599983 5999999997765 3444554 68999999999863
No 149
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.58 E-value=1.2e-14 Score=115.84 Aligned_cols=90 Identities=13% Similarity=0.225 Sum_probs=78.6
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-Cc------EEEEEeCcc-cHHHHHhC--------------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EA------DLVMVDAYL-EKDLAKEY-------------------- 123 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~------~~~~vd~~~-~~~~~~~~-------------------- 123 (304)
++++++|.||++||++|+.+.|.+.++++++++ ++ .++.|+++. +++.+++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 679999999999999999999999999999986 48 999999998 66666655
Q ss_pred -----CCccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 124 -----NILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 124 -----~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
++.++|++++++ +|+.+.++.|..+.+++.++|++.+.
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 689999888886 89888999999999999999988763
No 150
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.58 E-value=6.9e-15 Score=115.61 Aligned_cols=100 Identities=14% Similarity=0.255 Sum_probs=81.1
Q ss_pred cEEc--ChhcHHHH-hcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEe----------------------
Q 021976 58 VVSL--NGKNFSEF-MGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVD---------------------- 112 (304)
Q Consensus 58 v~~l--~~~~~~~~-~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd---------------------- 112 (304)
+..+ +++.+... +.++++++|+||++||++|+.+.|.+++++++ ++.++.|+
T Consensus 33 l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~ 109 (168)
T 2b1k_A 33 LESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPYALS 109 (168)
T ss_dssp EEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCCSEE
T ss_pred eecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCCcee
Confidence 4444 44444322 35789999999999999999999999999886 57788877
Q ss_pred -CcccHHHHHhCCCccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 113 -AYLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 113 -~~~~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
++.+..++++|||.++|+++++. +|+.+.++.|..+.+.+.+++++.+
T Consensus 110 ~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 159 (168)
T 2b1k_A 110 LFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLW 159 (168)
T ss_dssp EEETTCHHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHH
T ss_pred eECcchHHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 34566789999999999777776 8988899999999999999888765
No 151
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.58 E-value=8.3e-15 Score=111.87 Aligned_cols=83 Identities=13% Similarity=0.163 Sum_probs=71.0
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHH---HHHHhhC-CcEEEEEeCcccHH------------------------HHHhC
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAA---AAKMLKG-EADLVMVDAYLEKD------------------------LAKEY 123 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~---~~~~~~~-~~~~~~vd~~~~~~------------------------~~~~~ 123 (304)
.+++++|+|||+||++|+.+.|.+.+ +++++++ ++.++.|+.+.+.+ +++.|
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 109 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLY 109 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhc
Confidence 56999999999999999999999999 9999976 79999999887643 46789
Q ss_pred CCccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHH
Q 021976 124 NILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVR 157 (304)
Q Consensus 124 ~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~ 157 (304)
+|.++|++++++ +|+.+.+..| .+++.++|+
T Consensus 110 ~v~~~P~~~lid~~G~i~~~~~~---~~~l~~~l~ 141 (142)
T 3eur_A 110 DLRAIPTLYLLDKNKTVLLKDAT---LQKVEQYLA 141 (142)
T ss_dssp CCTTCSEEEEECTTCBEEEEEEC---HHHHHHHHH
T ss_pred CCCcCCeEEEECCCCcEEecCCC---HHHHHHHHh
Confidence 999999999997 7877766654 688888875
No 152
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.57 E-value=7.5e-15 Score=112.01 Aligned_cols=86 Identities=19% Similarity=0.324 Sum_probs=71.7
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHH---HHHHhhC-CcEEEEEeCcccHHH------------------------HHhC
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAA---AAKMLKG-EADLVMVDAYLEKDL------------------------AKEY 123 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~---~~~~~~~-~~~~~~vd~~~~~~~------------------------~~~~ 123 (304)
++++++|+||++||++|+.+.|.+.+ +++++++ ++.++.|+++.+.+. ++.|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 68999999999999999999999998 8888865 699999998866543 3389
Q ss_pred CCccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 124 NILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 124 ~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+|.++|++++++ +|+.+. +..+.+++.++|++..
T Consensus 106 ~v~~~P~~~lid~~G~i~~---~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 106 DIRATPTIYLLDGRKRVIL---KDTSMEQLIDYLATQA 140 (142)
T ss_dssp CCCSSSEEEEECTTCBEEE---CSCCHHHHHHHHHC--
T ss_pred CCCCCCeEEEECCCCCEEe---cCCCHHHHHHHHHHHc
Confidence 999999999996 786544 5678999999998654
No 153
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.57 E-value=1.5e-14 Score=121.47 Aligned_cols=121 Identities=14% Similarity=0.259 Sum_probs=107.4
Q ss_pred HHhCCCceecCCHHHHHHhhccCCeEEEEEecCCCCccHHHHHHHh-ccCCceeEEEecCHHHHhhcCCCCCCCCCeEEE
Q 021976 158 EKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEELAAAS-KLHSDVNFYQTTSADVAEFFHIHPKSKRPALIF 236 (304)
Q Consensus 158 ~~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~a-~~~~~~~f~~~~~~~l~~~~~i~~~~~~P~lv~ 236 (304)
++++|++..+++.++++.++++++.++|+||.+++++.++.|..+| .+++++.|+.+.+++++++|+++ .|++++
T Consensus 2 ~~~gP~v~~l~s~~~~~~~l~~~~v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~~~~~v~~~~~~~----~p~i~~ 77 (252)
T 2h8l_A 2 PLGSPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTNVESLVNEYDDN----GEGIIL 77 (252)
T ss_dssp ----CCEEECCSHHHHHHHHTSSSCEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEECCHHHHHHHCSS----SEEEEE
T ss_pred CcCCCCceeecCHHHHHHHhhcCCeEEEEEECCCCChHHHHHHHHHHhcccCcEEEEEChHHHHHHhCCC----CCcEEE
Confidence 4678999999999999999999999999999999999999999998 68899999999999999999998 499999
Q ss_pred EecC------CCceecc-cCCCCHHHHHHHHhcCCCCcEEeeCccchhhhhcC
Q 021976 237 LHLE------AGKATPF-RHQFTRLAIANFVTHTKHPLVVTLTIHNAQFVFQD 282 (304)
Q Consensus 237 ~~~~------~~~~~~y-~g~~~~~~i~~fi~~~~~p~~~~l~~~~~~~~~~~ 282 (304)
|+++ +.....| +|+++.++|.+||..+++|++++++.+|+..++..
T Consensus 78 fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~~ 130 (252)
T 2h8l_A 78 FRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGK 130 (252)
T ss_dssp ECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHHSSS
T ss_pred EcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeecccccHhhhcCC
Confidence 9963 3577899 99999999999999999999999999999998543
No 154
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.57 E-value=2.9e-13 Score=113.56 Aligned_cols=196 Identities=16% Similarity=0.235 Sum_probs=146.3
Q ss_pred CCcEEc-ChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEE
Q 021976 56 KDVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (304)
Q Consensus 56 ~~v~~l-~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (304)
+.+..+ +.+++++.+..+++++|.|+++| |....+.|.++|+.+.+.+.|+.+. +.+++++|++.+ |++++|
T Consensus 6 P~v~~l~s~~~~~~~l~~~~v~vvgff~~~---~~~~~~~f~~~A~~lr~~~~F~~~~---~~~v~~~~~~~~-p~i~~f 78 (252)
T 2h8l_A 6 PASVPLRTEEEFKKFISDKDASIVGFFDDS---FSEAHSEFLKAASNLRDNYRFAHTN---VESLVNEYDDNG-EGIILF 78 (252)
T ss_dssp CCEEECCSHHHHHHHHTSSSCEEEEEESCT---TSHHHHHHHHHHHHTTTTSCEEEEC---CHHHHHHHCSSS-EEEEEE
T ss_pred CCceeecCHHHHHHHhhcCCeEEEEEECCC---CChHHHHHHHHHHhcccCcEEEEEC---hHHHHHHhCCCC-CcEEEE
Confidence 456777 46778888888899999999998 4567789999999998789998884 577999999997 999999
Q ss_pred eCC-------eEEEEe-eCCCCHHHHHHHHHHHhCCCceecCCHHHHHHhhccCCeEEEEEecCCCCc-------cHHHH
Q 021976 135 VAG-------VRQFQF-FGERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGM-------ESEEL 199 (304)
Q Consensus 135 ~~g-------~~~~~~-~g~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~-------~~~~~ 199 (304)
+.+ .....| .|..+.+.|.+|+..+.-|.+.+++..+ ...+. .. +.++.|+...... ....+
T Consensus 79 k~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n-~~~~~-~~-~~~v~~~~~~~~~~~~~~~~~~~~~ 155 (252)
T 2h8l_A 79 RPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDN-KDLIQ-GK-DLLIAYYDVDYEKNAKGSNYWRNRV 155 (252)
T ss_dssp CCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTT-HHHHS-SS-SEEEEEECCBTTTBHHHHHHHHHHH
T ss_pred cchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeeccccc-Hhhhc-CC-CeEEEEeecchhhcchhHHHHHHHH
Confidence 853 245678 9999999999999999999999996544 55553 33 4555666432211 23345
Q ss_pred HHHh-ccCCc---eeEEEe---cCHHHHhhcCCC-CCCCCCeEEEEecCCCceecccCCCCHHH--HHHHHhc
Q 021976 200 AAAS-KLHSD---VNFYQT---TSADVAEFFHIH-PKSKRPALIFLHLEAGKATPFRHQFTRLA--IANFVTH 262 (304)
Q Consensus 200 ~~~a-~~~~~---~~f~~~---~~~~l~~~~~i~-~~~~~P~lv~~~~~~~~~~~y~g~~~~~~--i~~fi~~ 262 (304)
..+| .++++ +.|..+ ....+.+.||+. .+..+|+++++...+ ..+.++++++.+. |.+|+..
T Consensus 156 ~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~-~ky~~~~~~t~~~~~i~~F~~~ 227 (252)
T 2h8l_A 156 MMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKG-EKFVMQEEFSRDGKALERFLQD 227 (252)
T ss_dssp HHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTS-CEEECCSCCCTTSHHHHHHHHH
T ss_pred HHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcC-cEecCCcccCcchHHHHHHHHH
Confidence 5566 46555 888765 445688999993 123589999987543 4556778888888 9999986
No 155
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.57 E-value=1.3e-14 Score=113.75 Aligned_cols=86 Identities=13% Similarity=0.273 Sum_probs=76.4
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCc------------------ccH----------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------------------LEK---------------- 117 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~------------------~~~---------------- 117 (304)
++++++|.||++||++|+.+.|.+.+++++++ ++.++.|+++ ++.
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 67999999999999999999999999999999 8999999998 443
Q ss_pred ------HHHHhCCCccccEEEEEe-CCeEEEEeeCCC-CHHHHHHHHHHHh
Q 021976 118 ------DLAKEYNILAYPTLYLFV-AGVRQFQFFGER-TRDVISAWVREKM 160 (304)
Q Consensus 118 ------~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~-~~~~l~~~i~~~~ 160 (304)
.+++.|+|.++|++++++ +|+.+. .|.. +.+.+.+.|++.+
T Consensus 115 ~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~--~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 115 MVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY--AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp EEECCSHHHHHTTCCSSSEEEEEETTCCEEE--EEESCCHHHHHHHHHHC-
T ss_pred EEeChHHHHHHhCCCCceEEEEEcCCCcEEE--eCCCCCHHHHHHHHHHHh
Confidence 789999999999999996 786655 8888 9999999998765
No 156
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.57 E-value=1e-14 Score=113.01 Aligned_cols=95 Identities=18% Similarity=0.283 Sum_probs=78.6
Q ss_pred hcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCc-----------------------ccHHHH
Q 021976 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-----------------------LEKDLA 120 (304)
Q Consensus 64 ~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~-----------------------~~~~~~ 120 (304)
+.+......+++++|.||++||++|+.+.|.+++++++ +++.++.|+++ .+..++
T Consensus 33 ~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (156)
T 1kng_A 33 PGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRAS 110 (156)
T ss_dssp CCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHH
T ss_pred ceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHH
Confidence 33433333588999999999999999999999999877 46888888864 345788
Q ss_pred HhCCCccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 121 KEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 121 ~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
++|++.++|+++++. +|+.+.++.|..+.+.+.+++.+.+
T Consensus 111 ~~~~v~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 111 IEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp HHTTCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHH
T ss_pred HhcCcCccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHH
Confidence 999999999887775 8988899999999999999988765
No 157
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.56 E-value=2.7e-14 Score=113.24 Aligned_cols=88 Identities=16% Similarity=0.278 Sum_probs=76.4
Q ss_pred cCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeC-----------------------cccHHHHHhCCCcc
Q 021976 71 GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA-----------------------YLEKDLAKEYNILA 127 (304)
Q Consensus 71 ~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~-----------------------~~~~~~~~~~~v~~ 127 (304)
..+++++|+||++||++|+.+.|.+++++++ ++.++.|++ +.+..+++.|+|.+
T Consensus 56 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 132 (176)
T 3kh7_A 56 LKGKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYG 132 (176)
T ss_dssp GCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCS
T ss_pred hCCCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCC
Confidence 3589999999999999999999999999887 588888885 34457889999999
Q ss_pred ccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 128 YPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 128 ~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
+|++++++ +|+++.++.|..+.+.+.++|.+.+.
T Consensus 133 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 133 APETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp SCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHHH
T ss_pred CCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 99988886 89899999999999999998887663
No 158
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.56 E-value=1.6e-14 Score=111.61 Aligned_cols=90 Identities=20% Similarity=0.366 Sum_probs=78.1
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCccc-----------------------HHHHHhCCCcc
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE-----------------------KDLAKEYNILA 127 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-----------------------~~~~~~~~v~~ 127 (304)
++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.+ ..+++.|++.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 679999999999999999999999999999987 799999999875 34889999999
Q ss_pred ccEEEEEe-CCeEEEEeeCCC--CHHHHHHHHHHHhC
Q 021976 128 YPTLYLFV-AGVRQFQFFGER--TRDVISAWVREKMT 161 (304)
Q Consensus 128 ~Pt~~~~~-~g~~~~~~~g~~--~~~~l~~~i~~~~~ 161 (304)
+|++++++ +|+.+.++.|.. +.+++.++|++...
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 107 VPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp BCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC--
T ss_pred CCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHH
Confidence 99888886 898889999975 66799999977653
No 159
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.55 E-value=1.1e-14 Score=104.65 Aligned_cols=77 Identities=17% Similarity=0.204 Sum_probs=69.9
Q ss_pred cEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHH
Q 021976 75 NVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISA 154 (304)
Q Consensus 75 ~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~ 154 (304)
..++.||++||++|+.+.|.+++++++++ +.+..||+++++++.++||++ +|++++|.+|+.+ ..|..+.++|.+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v--~~g~~~~~~L~~ 104 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL--CHYFLDSDVIGA 104 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE--ECSSCCCHHHHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE--EecCCCHHHHHH
Confidence 57999999999999999999999998874 899999999999999999997 9999999999765 458889999988
Q ss_pred HH
Q 021976 155 WV 156 (304)
Q Consensus 155 ~i 156 (304)
||
T Consensus 105 ~L 106 (107)
T 2fgx_A 105 YL 106 (107)
T ss_dssp HH
T ss_pred Hh
Confidence 87
No 160
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.54 E-value=8.2e-15 Score=101.70 Aligned_cols=74 Identities=15% Similarity=0.138 Sum_probs=64.9
Q ss_pred EEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHH
Q 021976 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWV 156 (304)
Q Consensus 77 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i 156 (304)
++.||++||++|+.+.|.+++++.++ +.+||++++++++++||++ +|++++ .+|+.+. |..+.+.|.+++
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v~---g~~~~~~L~~~l 72 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDDAALESAYGLR-VPVLRD-PMGRELD---WPFDAPRLRAWL 72 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEEE---SCCCHHHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEEe---CCCCHHHHHHHH
Confidence 78899999999999999998876543 6899999999999999998 999988 8886653 889999999999
Q ss_pred HHHh
Q 021976 157 REKM 160 (304)
Q Consensus 157 ~~~~ 160 (304)
.+.+
T Consensus 73 ~~~~ 76 (87)
T 1ttz_A 73 DAAP 76 (87)
T ss_dssp HTCC
T ss_pred HHHH
Confidence 7654
No 161
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.53 E-value=6.6e-14 Score=111.89 Aligned_cols=92 Identities=21% Similarity=0.344 Sum_probs=78.8
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCccc-----HHHHHhCCCc-------------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE-----KDLAKEYNIL------------------- 126 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-----~~~~~~~~v~------------------- 126 (304)
++++++|+||++||++|+.+.|.+.++++++++ ++.++.|+++.+ ..+++++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 688999999999999999999999999999974 899999998865 5677777774
Q ss_pred ----cccEEEEEe-CCeEEEEeeCCCC--HHHHHHHHHHHhCCC
Q 021976 127 ----AYPTLYLFV-AGVRQFQFFGERT--RDVISAWVREKMTLG 163 (304)
Q Consensus 127 ----~~Pt~~~~~-~g~~~~~~~g~~~--~~~l~~~i~~~~~~~ 163 (304)
++|++++++ +|+.+.++.|..+ .+++.++|++.+..+
T Consensus 139 ~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~~ 182 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGKA 182 (186)
T ss_dssp TCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC--
T ss_pred cccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhccc
Confidence 899999996 8988899999765 788999999887644
No 162
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.53 E-value=7.2e-14 Score=107.64 Aligned_cols=86 Identities=19% Similarity=0.323 Sum_probs=75.2
Q ss_pred CCCcEEEEEEcCCChh--hhhhHHHHHHHHHHh-hC-CcEEEEEeCcccH-------------------------HHHHh
Q 021976 72 KNRNVMVMFYANWCYW--SKKLAPEFAAAAKML-KG-EADLVMVDAYLEK-------------------------DLAKE 122 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~--C~~~~~~~~~~~~~~-~~-~~~~~~vd~~~~~-------------------------~~~~~ 122 (304)
++++++|+||++||++ |+.+.|.+.++++++ ++ ++.++.|+++.++ .+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 5799999999999999 999999999999999 65 6999999988664 78999
Q ss_pred CCCccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 123 YNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 123 ~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
|||.++|++++++ +|+.+.++. +.+++.+.|++.+
T Consensus 112 ~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll 147 (150)
T 3fw2_A 112 YSIYKIPANILLSSDGKILAKNL---RGEELKKKIENIV 147 (150)
T ss_dssp TTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHH
T ss_pred cCCCccCeEEEECCCCEEEEccC---CHHHHHHHHHHHH
Confidence 9999999999996 897777764 7788888887765
No 163
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.52 E-value=5.7e-14 Score=107.38 Aligned_cols=86 Identities=16% Similarity=0.208 Sum_probs=69.1
Q ss_pred cEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhh--CCcEEEEEeCccc-------------------
Q 021976 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK--GEADLVMVDAYLE------------------- 116 (304)
Q Consensus 58 v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~~vd~~~~------------------- 116 (304)
+..++++.+...-.++++++|+||++||++|+.+.|.+.+++++++ +++.++.|+++.+
T Consensus 13 l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~ 92 (144)
T 1i5g_A 13 VLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFE 92 (144)
T ss_dssp EEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTT
T ss_pred EEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccC
Confidence 3444444443222367899999999999999999999999999998 3789999998763
Q ss_pred -----HHHHHhCCCccccEEEEEe--CCeEEEEe
Q 021976 117 -----KDLAKEYNILAYPTLYLFV--AGVRQFQF 143 (304)
Q Consensus 117 -----~~~~~~~~v~~~Pt~~~~~--~g~~~~~~ 143 (304)
..++++|+|.++|++++++ +|+.+.++
T Consensus 93 ~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~~~ 126 (144)
T 1i5g_A 93 DRKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQ 126 (144)
T ss_dssp CHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESC
T ss_pred chHHHHHHHHHcCCCCCCEEEEEECCCCcEEecc
Confidence 5789999999999999997 78665554
No 164
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.52 E-value=9.5e-14 Score=121.44 Aligned_cols=89 Identities=20% Similarity=0.298 Sum_probs=80.5
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc---------------------------cHHHHHhC
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL---------------------------EKDLAKEY 123 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~---------------------------~~~~~~~~ 123 (304)
+++++||+||++||++|+.+.|.+.++++++++ ++.++.|++++ +..++++|
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 579999999999999999999999999999987 79999998752 35789999
Q ss_pred CCccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 124 NILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 124 ~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+|.++|++++++ +|+++.++.|..+.+++.++|++.+
T Consensus 161 gV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 161 RNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp TCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHH
T ss_pred CCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 999999999995 8999999999999999999998876
No 165
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.51 E-value=6.5e-14 Score=109.85 Aligned_cols=72 Identities=19% Similarity=0.343 Sum_probs=64.2
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC--CcEEEEEeCccc------------------------HHHHHhCCC
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG--EADLVMVDAYLE------------------------KDLAKEYNI 125 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~------------------------~~~~~~~~v 125 (304)
++++++|+|||+||++|+++.|.+.++++++++ ++.++.|+++.+ ..++++|+|
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 679999999999999999999999999999985 788999998776 678999999
Q ss_pred ccccEEEEEe-C-CeEEEEe
Q 021976 126 LAYPTLYLFV-A-GVRQFQF 143 (304)
Q Consensus 126 ~~~Pt~~~~~-~-g~~~~~~ 143 (304)
.++|++++++ + |+++.+.
T Consensus 127 ~~~Pt~~lid~~~G~iv~~~ 146 (165)
T 3s9f_A 127 ESIPTLIGLNADTGDTVTTR 146 (165)
T ss_dssp CSSSEEEEEETTTCCEEESC
T ss_pred CCCCEEEEEeCCCCEEEecc
Confidence 9999999998 5 8666553
No 166
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.50 E-value=8.5e-14 Score=112.16 Aligned_cols=91 Identities=20% Similarity=0.267 Sum_probs=78.7
Q ss_pred CCC-cEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCc-----------------------------ccHHHH
Q 021976 72 KNR-NVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAY-----------------------------LEKDLA 120 (304)
Q Consensus 72 ~~~-~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~-----------------------------~~~~~~ 120 (304)
.++ +++|+||++||++|+.+.|.+.++++++++ ++.++.|+++ .+..++
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVA 123 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHH
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHH
Confidence 455 599999999999999999999999999987 6999999983 356789
Q ss_pred HhCCCccccEEEEEe-CCeEEEE---------eeCCCCHHHHHHHHHHHhCC
Q 021976 121 KEYNILAYPTLYLFV-AGVRQFQ---------FFGERTRDVISAWVREKMTL 162 (304)
Q Consensus 121 ~~~~v~~~Pt~~~~~-~g~~~~~---------~~g~~~~~~l~~~i~~~~~~ 162 (304)
++|+|.++|++++++ +|+.+.+ +.|..+.+++.+.|++.+..
T Consensus 124 ~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~ 175 (196)
T 2ywi_A 124 KAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEG 175 (196)
T ss_dssp HHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHT
T ss_pred HHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcC
Confidence 999999999999996 8887777 45778889999999888743
No 167
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.50 E-value=5.7e-14 Score=107.71 Aligned_cols=72 Identities=21% Similarity=0.313 Sum_probs=63.4
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhh--CCcEEEEEeCccc------------------------HHHHHhCCC
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK--GEADLVMVDAYLE------------------------KDLAKEYNI 125 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~~vd~~~~------------------------~~~~~~~~v 125 (304)
++++++|+||++||++|+.+.|.+.+++++++ +++.++.|+++.+ ..++++|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 67899999999999999999999999999998 3788999988763 478999999
Q ss_pred ccccEEEEEe--CCeEEEEe
Q 021976 126 LAYPTLYLFV--AGVRQFQF 143 (304)
Q Consensus 126 ~~~Pt~~~~~--~g~~~~~~ 143 (304)
.++|++++++ +|+.+.+.
T Consensus 107 ~~~Pt~~lid~~~G~i~~~~ 126 (146)
T 1o8x_A 107 ESIPTLIGVDADSGDVVTTR 126 (146)
T ss_dssp CSSSEEEEEETTTCCEEESC
T ss_pred CCCCEEEEEECCCCeEEEec
Confidence 9999999997 78666554
No 168
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.49 E-value=1.3e-13 Score=110.44 Aligned_cols=91 Identities=21% Similarity=0.317 Sum_probs=76.6
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCc-----------------------------ccHHHHHh
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-----------------------------LEKDLAKE 122 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~-----------------------------~~~~~~~~ 122 (304)
.+++++|+||++||++|+.+.|.++++++++++.+.++.|+++ .+.++++.
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 5799999999999999999999999999999866899999983 35578999
Q ss_pred CCCccccEEEEEe-CCeEEEE--------eeCCCCHHHHHHHHHHHhCC
Q 021976 123 YNILAYPTLYLFV-AGVRQFQ--------FFGERTRDVISAWVREKMTL 162 (304)
Q Consensus 123 ~~v~~~Pt~~~~~-~g~~~~~--------~~g~~~~~~l~~~i~~~~~~ 162 (304)
|++.++|++++++ +|+.+.+ +.|..+.+++.+.|++.+..
T Consensus 112 ~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~ 160 (188)
T 2cvb_A 112 YRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRG 160 (188)
T ss_dssp TTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTT
T ss_pred cCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcC
Confidence 9999999999996 8876655 22334678999999888754
No 169
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.48 E-value=8.1e-12 Score=104.58 Aligned_cols=195 Identities=14% Similarity=0.142 Sum_probs=144.6
Q ss_pred CCcEEcCh-hcHHHHhcC-CCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEE
Q 021976 56 KDVVSLNG-KNFSEFMGK-NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (304)
Q Consensus 56 ~~v~~l~~-~~~~~~~~~-~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 133 (304)
+.+..++. +++++.++. +++++|-|++++| ....+.|.++|+.+.+.+.|+.+. +.++++++++++ |++++
T Consensus 6 P~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~~~F~~t~---~~~v~~~~~v~~-p~ivl 78 (250)
T 3ec3_A 6 PPSKEILTLKQVQEFLKDGDDVVILGVFQGVG---DPGYLQYQDAANTLREDYKFHHTF---STEIAKFLKVSL-GKLVL 78 (250)
T ss_dssp CSSEECCCHHHHHHHHHHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTTCCEEEEC---CHHHHHHHTCCS-SEEEE
T ss_pred CCceecCCHHHHHHHHhcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcCcEEEEEC---cHHHHHHcCCCC-CeEEE
Confidence 45667744 788888877 8999999999985 577889999999998889999875 678899999988 99999
Q ss_pred EeCC-------eEEEEee--CCCCHHHHHHHHHHHhCCCceecCCHHHHHHhhccCCeEEEEEecC-CC---Cc----cH
Q 021976 134 FVAG-------VRQFQFF--GERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHD-LE---GM----ES 196 (304)
Q Consensus 134 ~~~g-------~~~~~~~--g~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~-~~---~~----~~ 196 (304)
|+.+ .....|. |..+.+.|.+|+..+.-|-+.+++..+ ...... ..+.+++|+.. .. .. ..
T Consensus 79 fk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n-~~~~~~-~~~l~~~~~~~d~~~~~~~~~~~~~ 156 (250)
T 3ec3_A 79 MQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSN-DAKRYS-KRPLVVVYYSVDFSFDYRTATQFWR 156 (250)
T ss_dssp ECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTTT-HHHHSC-SSSEEEEEECCCCSTTTHHHHHHHH
T ss_pred EecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCccc-hhhhhc-cCccEEEEEecccccccchhHHHHH
Confidence 9842 3456788 579999999999999999999996544 444444 45566666642 22 11 34
Q ss_pred HHHHHHh-ccCCceeEEEec---CHHHHhhcCCCCCCCC-CeEEEEecCCCceeccc-CCCCHHHHHHHHhc
Q 021976 197 EELAAAS-KLHSDVNFYQTT---SADVAEFFHIHPKSKR-PALIFLHLEAGKATPFR-HQFTRLAIANFVTH 262 (304)
Q Consensus 197 ~~~~~~a-~~~~~~~f~~~~---~~~l~~~~~i~~~~~~-P~lv~~~~~~~~~~~y~-g~~~~~~i~~fi~~ 262 (304)
..+..+| +++ ++.|..+. .....+.||++. .+. |.++++... +..+.+. +.++.+.|.+|+..
T Consensus 157 ~~~~~vAk~~k-ki~F~~~d~~~~~~~l~~fgl~~-~~~~p~~~~~~~~-~~ky~~~~~~~t~~~i~~Fv~~ 225 (250)
T 3ec3_A 157 NKVLEVAKDFP-EYTFAIADEEDYATEVKDLGLSE-SGGDVNAAILDES-GKKFAMEPEEFDSDALREFVMA 225 (250)
T ss_dssp HHHHHHHTTCT-TSEEEEEETTTTHHHHHHTTCSS-CSCSCEEEEECTT-SCEEECCCCSCCHHHHHHHHHH
T ss_pred HHHHHHHHhhc-ceeEEEEcHHHHHHHHHHcCCCc-cCCCcEEEEEcCC-CceecCCcccCCHHHHHHHHHH
Confidence 5566777 566 88888653 445778889874 123 577777643 3455555 67899999999985
No 170
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.48 E-value=1.3e-13 Score=105.29 Aligned_cols=83 Identities=14% Similarity=0.177 Sum_probs=69.7
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcccH--------------------------HHHHhCC
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEK--------------------------DLAKEYN 124 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~--------------------------~~~~~~~ 124 (304)
++++++|+|||+||++|+.+.|.+.++++++++ ++.++.|+.+.+. .+++.|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 579999999999999999999999999999975 7999999887432 5778999
Q ss_pred CccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHH
Q 021976 125 ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVR 157 (304)
Q Consensus 125 v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~ 157 (304)
|.++|++++++ +|+.+.+.. ..+++.+.++
T Consensus 111 v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~ 141 (143)
T 4fo5_A 111 LRKGFKNFLINDEGVIIAANV---TPEKLTEILK 141 (143)
T ss_dssp GGGCCCEEEECTTSBEEEESC---CHHHHHHHHT
T ss_pred CCCCCcEEEECCCCEEEEccC---CHHHHHHHHH
Confidence 99999999998 887766653 4567776664
No 171
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.48 E-value=1.3e-13 Score=105.27 Aligned_cols=72 Identities=19% Similarity=0.321 Sum_probs=63.0
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhh--CCcEEEEEeCccc------------------------HHHHHhCCC
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK--GEADLVMVDAYLE------------------------KDLAKEYNI 125 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~~vd~~~~------------------------~~~~~~~~v 125 (304)
++++++|+||++||++|+.+.|.+.+++++++ +++.++.|+++.+ ..++++|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 57899999999999999999999999999997 3788999988763 468999999
Q ss_pred ccccEEEEEe--CCeEEEEe
Q 021976 126 LAYPTLYLFV--AGVRQFQF 143 (304)
Q Consensus 126 ~~~Pt~~~~~--~g~~~~~~ 143 (304)
.++|++++++ +|+.+.+.
T Consensus 107 ~~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 107 ESIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp CSSSEEEEEETTTCCEEESC
T ss_pred CCCCEEEEEECCCCeEEecc
Confidence 9999999998 78665543
No 172
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.46 E-value=3.5e-13 Score=105.20 Aligned_cols=90 Identities=14% Similarity=0.210 Sum_probs=78.1
Q ss_pred CCCcEEEEEEcCCChh-hhhhHHHHHHHHHHhhC-----CcEEEEEeCccc----------------------------H
Q 021976 72 KNRNVMVMFYANWCYW-SKKLAPEFAAAAKMLKG-----EADLVMVDAYLE----------------------------K 117 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~-C~~~~~~~~~~~~~~~~-----~~~~~~vd~~~~----------------------------~ 117 (304)
.+++++|+||++||++ |+.+.|.+.++++++++ ++.++.|+++.+ .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 5799999999999998 99999999999999864 788999988642 1
Q ss_pred HHHHhCCCcccc---------------EEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 118 DLAKEYNILAYP---------------TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 118 ~~~~~~~v~~~P---------------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
.+++.|||.+.| ++++++ +|+.+..+.|..+.+++.+.|++.+.
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHHG
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 478899999999 777776 89899999999999999999988763
No 173
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.45 E-value=4.6e-13 Score=105.29 Aligned_cols=90 Identities=18% Similarity=0.248 Sum_probs=78.2
Q ss_pred CCCcEEEEEEcCCChh-hhhhHHHHHHHHHHhh-----CCcEEEEEeCccc----------------------------H
Q 021976 72 KNRNVMVMFYANWCYW-SKKLAPEFAAAAKMLK-----GEADLVMVDAYLE----------------------------K 117 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~-C~~~~~~~~~~~~~~~-----~~~~~~~vd~~~~----------------------------~ 117 (304)
.+++++|+||++||++ |+.+.|.+++++++++ +++.++.|+++.+ .
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 5789999999999998 9999999999999995 3789999988731 2
Q ss_pred HHHHhCCCcccc---------------EEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 118 DLAKEYNILAYP---------------TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 118 ~~~~~~~v~~~P---------------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
.+++.|||...| ++++++ +|+.+..+.|..+.+++.+.|++.+.
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 578899999888 777886 89899999999999999999988764
No 174
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=99.44 E-value=4.5e-13 Score=99.30 Aligned_cols=104 Identities=15% Similarity=0.235 Sum_probs=92.4
Q ss_pred HHhCCCcee--cCCHHHHHHhhccCCeEEEEEecCCCCccHHHHHHHhccCCceeEEEecCHHHHhhcCCCCCCCCCeEE
Q 021976 158 EKMTLGTYS--ITTTDEAERILTVESKLVLGFLHDLEGMESEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALI 235 (304)
Q Consensus 158 ~~~~~~~~~--l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~~~~l~~~~~i~~~~~~P~lv 235 (304)
+..+|+... |++.++++.+++++++++|+||++++++..+.|..+|...+++.|+.+.++++++.++++ .|+++
T Consensus 15 kq~gP~~~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~~~~F~~~A~~~~d~~F~~t~~~~v~~~~~v~----~~~vv 90 (124)
T 2l4c_A 15 DGPGAAQEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKFPGVSFGISTDSEVLTHYNIT----GNTIC 90 (124)
T ss_dssp CCSCCSCCCEECCSHHHHHHHHHTSSEEEEEECSCTTSTHHHHHHHHHHHCTTSEEEEECCHHHHHHTTCC----SSCEE
T ss_pred hccCCCCcceEcCCHHHHHHHHhcCCCEEEEEECCCCChhHHHHHHHHHhCCCceEEEEChHHHHHHcCCC----CCeEE
Confidence 455676655 899999999999999999999999999999999999953499999999999999999998 59999
Q ss_pred EEecCCCceecccC----CCCHHHHHHHHhcCCC
Q 021976 236 FLHLEAGKATPFRH----QFTRLAIANFVTHTKH 265 (304)
Q Consensus 236 ~~~~~~~~~~~y~g----~~~~~~i~~fi~~~~~ 265 (304)
+|++.+.....|+| ..+.++|.+||..+++
T Consensus 91 lfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n~l 124 (124)
T 2l4c_A 91 LFRLVDNEQLNLEDEDIESIDATKLSRFIEINSL 124 (124)
T ss_dssp EEETTTTEEEEECHHHHTTCCHHHHHHHHHHHCC
T ss_pred EEEcCCCCceeecCcccCCCCHHHHHHHHHHhcC
Confidence 99998878889986 7899999999998753
No 175
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.42 E-value=9.9e-13 Score=105.21 Aligned_cols=104 Identities=13% Similarity=0.096 Sum_probs=78.3
Q ss_pred cEEcChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc-------c-HHHH--------
Q 021976 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E-KDLA-------- 120 (304)
Q Consensus 58 v~~l~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------~-~~~~-------- 120 (304)
+.+++++.+...--+++++||+||++||++|+.+.|.+.++++++++ ++.++.|+++. + .++.
T Consensus 31 l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~ 110 (187)
T 3dwv_A 31 VLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFK 110 (187)
T ss_dssp CBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCC
T ss_pred EEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccC
Confidence 33344444332223689999999999999999999999999999987 69999998762 1 1111
Q ss_pred ----------------------------HhCCCcccc---EEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 121 ----------------------------KEYNILAYP---TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 121 ----------------------------~~~~v~~~P---t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
..+++..+| ++++++ +|+.+..+.|..+.+++.+.|++.+.
T Consensus 111 ~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 111 AEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLG 183 (187)
T ss_dssp CSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC-
T ss_pred CCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHh
Confidence 112344667 888886 89899999999999999999998875
No 176
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.42 E-value=4.4e-13 Score=105.62 Aligned_cols=89 Identities=15% Similarity=0.169 Sum_probs=72.9
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc-------c----HHHH-------------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLA------------------- 120 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------~----~~~~------------------- 120 (304)
++++++|+|||+||++|+ +.|.+.++++++++ ++.++.|+++. + .+++
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 679999999999999999 99999999999987 69999998741 1 1122
Q ss_pred -----------HhCCCcccc------EEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 121 -----------KEYNILAYP------TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 121 -----------~~~~v~~~P------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
+.|++.++| ++++++ +|+.+.++.|..+.+.+.+.|.+.+.
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 247888999 777775 89899999999999999999988764
No 177
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.42 E-value=1e-12 Score=107.81 Aligned_cols=105 Identities=18% Similarity=0.222 Sum_probs=79.5
Q ss_pred cEEcChhcHHHHhcCCC-cEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCc---------------------
Q 021976 58 VVSLNGKNFSEFMGKNR-NVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAY--------------------- 114 (304)
Q Consensus 58 v~~l~~~~~~~~~~~~~-~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~--------------------- 114 (304)
+.+++++.+...--.++ +++|.||++||++|+.+.|.++++++++++ ++.++.|+++
T Consensus 43 l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~ 122 (218)
T 3u5r_E 43 LPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYG 122 (218)
T ss_dssp EECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHT
T ss_pred eECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhC
Confidence 33344443332222466 599999999999999999999999999987 5999999983
Q ss_pred --------ccHHHHHhCCCccccEEEEEe-CCeEEEEee---------CCCCHHHHHHHHHHHhCC
Q 021976 115 --------LEKDLAKEYNILAYPTLYLFV-AGVRQFQFF---------GERTRDVISAWVREKMTL 162 (304)
Q Consensus 115 --------~~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~---------g~~~~~~l~~~i~~~~~~ 162 (304)
.+..+++.|++.++|++++++ +|+++.+.. |..+.++|.+.|++.+..
T Consensus 123 ~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~ 188 (218)
T 3u5r_E 123 YGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKG 188 (218)
T ss_dssp CCSCEEECTTCHHHHHHTCCEESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTT
T ss_pred CCccEEECCccHHHHHcCCCCCCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHcC
Confidence 456789999999999999996 886653321 234568888888887743
No 178
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.42 E-value=1.3e-12 Score=104.81 Aligned_cols=90 Identities=16% Similarity=0.121 Sum_probs=75.4
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc-------c----HHHH-Hh----------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLA-KE---------------- 122 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------~----~~~~-~~---------------- 122 (304)
++++++|+||++||++|+.+.|.+.++++++++ ++.++.|++++ . .+++ ++
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 678999999999999999999999999999987 69999999872 1 1223 22
Q ss_pred -------------CCCcccc------EEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 123 -------------YNILAYP------TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 123 -------------~~v~~~P------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
+++.++| ++++++ +|+.+.++.|..+.+++.+.|.+.+.
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 4788899 777775 89899999999999999999988764
No 179
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.41 E-value=1.8e-12 Score=101.11 Aligned_cols=75 Identities=15% Similarity=0.244 Sum_probs=67.2
Q ss_pred CCCc-EEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCc---------------------ccHHHHHhCCCcc
Q 021976 72 KNRN-VMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAY---------------------LEKDLAKEYNILA 127 (304)
Q Consensus 72 ~~~~-~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~---------------------~~~~~~~~~~v~~ 127 (304)
.++. ++|.|| ++||++|+.+.|.+.++++++++ ++.++.|+.+ .+.++++.||+.+
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKG 106 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCC
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCC
Confidence 5676 999999 99999999999999999999987 6999999987 4567899999999
Q ss_pred ----ccEEEEEe-CCeEEEEeeCC
Q 021976 128 ----YPTLYLFV-AGVRQFQFFGE 146 (304)
Q Consensus 128 ----~Pt~~~~~-~g~~~~~~~g~ 146 (304)
+|++++++ +|+.+..+.|.
T Consensus 107 ~~~~~P~~~lid~~G~i~~~~~g~ 130 (161)
T 3drn_A 107 FILPARITFVIDKKGIIRHIYNSQ 130 (161)
T ss_dssp SSSCCCEEEEECTTSBEEEEEECS
T ss_pred cCcccceEEEECCCCEEEEEEecC
Confidence 99999997 89888899984
No 180
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.40 E-value=1.4e-12 Score=100.26 Aligned_cols=96 Identities=10% Similarity=0.089 Sum_probs=77.4
Q ss_pred hcHHHHh----cCCCcEEEEEEcCCChhhhhhHHHH---HHHHHHhhCCcEEEEEeCcc--cHHHHHhCCCccccEEEEE
Q 021976 64 KNFSEFM----GKNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAYL--EKDLAKEYNILAYPTLYLF 134 (304)
Q Consensus 64 ~~~~~~~----~~~~~~lv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~ 134 (304)
.++++.+ +++|++||+||++||.+|+.+.... .++++.+++++.++++|.+. +..+.++|++.++|+++++
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fl 108 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSIL 108 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEE
Confidence 4555544 4589999999999999999997655 56666665588999999865 3568899999999999999
Q ss_pred e-C-CeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 135 V-A-GVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 135 ~-~-g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+ + |+.+..+.| .+++++.++|++.+
T Consensus 109 d~~~G~~l~~~~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 109 DPRTGQKLVEWHQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp CTTTCCCCEEESS-CCHHHHHHHHHHHH
T ss_pred eCCCCcEeeecCC-CCHHHHHHHHHHHH
Confidence 8 5 767777766 89999999888765
No 181
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.39 E-value=5.8e-13 Score=104.77 Aligned_cols=88 Identities=14% Similarity=0.200 Sum_probs=75.0
Q ss_pred CCCcEEEEEEcCCChh-hhhhHHHHHHHHHHhhC----CcEEEEEeCccc----------------------------HH
Q 021976 72 KNRNVMVMFYANWCYW-SKKLAPEFAAAAKMLKG----EADLVMVDAYLE----------------------------KD 118 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~-C~~~~~~~~~~~~~~~~----~~~~~~vd~~~~----------------------------~~ 118 (304)
++++++|+||++||++ |+.+.|.+.++++++++ ++.++.|+++.+ ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 6789999999999997 99999999999999874 699999998743 35
Q ss_pred HHHhCCC---------------ccccEEEEEeCCeEEEEeeCCC--CHHHHHHHHHHH
Q 021976 119 LAKEYNI---------------LAYPTLYLFVAGVRQFQFFGER--TRDVISAWVREK 159 (304)
Q Consensus 119 ~~~~~~v---------------~~~Pt~~~~~~g~~~~~~~g~~--~~~~l~~~i~~~ 159 (304)
+++.||+ .++|+++++++|+.+..+.|.. +.+++.+.|++.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 6666664 5789999999998888999987 899999988764
No 182
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.39 E-value=1.1e-12 Score=103.00 Aligned_cols=90 Identities=10% Similarity=0.152 Sum_probs=74.5
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc-------c----HHHHH-hC---------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLAK-EY--------------- 123 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------~----~~~~~-~~--------------- 123 (304)
++++++|+||++||++|+.+.|.+.++++++++ ++.++.|+++. . .++++ ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 689999999999999999999999999999987 69999999852 1 22334 43
Q ss_pred --------------CC--cccc---EEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 124 --------------NI--LAYP---TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 124 --------------~v--~~~P---t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
++ .++| ++++++ +|+.+.++.|..+.+++.+.|++.+.
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 111 NASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp TBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTT
T ss_pred chHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhh
Confidence 34 5678 888886 89899999999999999999988764
No 183
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.39 E-value=1.1e-13 Score=117.17 Aligned_cols=81 Identities=20% Similarity=0.311 Sum_probs=64.7
Q ss_pred hcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCc------ccHHHHHhCCCccccEEEEEeCC
Q 021976 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------LEKDLAKEYNILAYPTLYLFVAG 137 (304)
Q Consensus 64 ~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~------~~~~~~~~~~v~~~Pt~~~~~~g 137 (304)
..+.+.+.+. .+|+|||+||+||+++.|.|++++++++ .+||+ +++++|+++||+++||+++ +|
T Consensus 190 ~~la~~l~~~--~vV~F~A~WC~~Ck~l~p~le~lA~~l~------~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G 259 (291)
T 3kp9_A 190 VGLAAHLRQI--GGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII--NG 259 (291)
T ss_dssp HHHHHHHHHT--TCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TT
T ss_pred HHHHHHhCCC--CEEEEECCCCHHHHHHHHHHHHHHHHcC------EEEEeecCchhhHHHHHHHcCCcccCeEEE--CC
Confidence 3444555333 3699999999999999999999987653 44554 3789999999999999655 88
Q ss_pred eEEEEeeCCCCHHHHHHHHH
Q 021976 138 VRQFQFFGERTRDVISAWVR 157 (304)
Q Consensus 138 ~~~~~~~g~~~~~~l~~~i~ 157 (304)
+ +|.|.++.+++.+|+.
T Consensus 260 ~---~~~G~~~~~~L~~~l~ 276 (291)
T 3kp9_A 260 R---TYTGVRSLEALAVASG 276 (291)
T ss_dssp E---EEESCCCHHHHHHHTC
T ss_pred E---EecCCCCHHHHHHHHC
Confidence 5 4999999999999985
No 184
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.39 E-value=1.4e-12 Score=102.17 Aligned_cols=90 Identities=13% Similarity=0.108 Sum_probs=72.5
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc-------c----HHH-HHhC---------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDL-AKEY--------------- 123 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------~----~~~-~~~~--------------- 123 (304)
++++++|+||++||++|+.+.|.+.++++++++ ++.++.|+++. . .++ .+++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 679999999999999999999999999999987 69999999863 1 122 1322
Q ss_pred --------------C-----CccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 124 --------------N-----ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 124 --------------~-----v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
| |..+|++++++ +|+.+.++.|..+.+++.+.|++.+.
T Consensus 110 ~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 167 (169)
T 2v1m_A 110 DADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELLE 167 (169)
T ss_dssp TSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHhc
Confidence 3 33458888886 89999999999888999999887763
No 185
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.09 E-value=3.4e-14 Score=110.59 Aligned_cols=88 Identities=16% Similarity=0.116 Sum_probs=69.2
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHH-HHHHhh-C-CcEEEEEeCcccHHHHHhC----------------------C--
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAA-AAKMLK-G-EADLVMVDAYLEKDLAKEY----------------------N-- 124 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~-~~~~~~-~-~~~~~~vd~~~~~~~~~~~----------------------~-- 124 (304)
++++++|.||++||++|+.+.|.+.+ +.++++ + ++.++.|+++++++.+++| +
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 57899999999999999999999998 888887 3 7889999987665444333 3
Q ss_pred CccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 125 ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 125 v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+.++|++++++ +|+.+.++.| .+.+++.+++++..
T Consensus 112 ~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l~ 147 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQIN 147 (159)
Confidence 57799999995 8988888877 45566766665543
No 186
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.38 E-value=4.2e-11 Score=106.51 Aligned_cols=193 Identities=12% Similarity=0.188 Sum_probs=127.7
Q ss_pred CcEEcCh-hcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEe
Q 021976 57 DVVSLNG-KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (304)
Q Consensus 57 ~v~~l~~-~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 135 (304)
.+..++. ++++. +..++.++|.|++++|.++ .+.|.++|+.+++.+.|+...+ ++++++++.++| +++..
T Consensus 119 ~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~~---~~~f~~~A~~~~~~~~F~~~~~----~~~~~~~v~~~p-i~~~~ 189 (382)
T 2r2j_A 119 PIQEIRDLAEITT-LDRSKRNIIGYFEQKDSDN---YRVFERVANILHDDCAFLSAFG----DVSKPERYSGDN-IIYKP 189 (382)
T ss_dssp CCEEC-------------CCEEEEEESCSSSHH---HHHHHHHHHHHTTTCEEEEEES----CC--------CE-EEEEC
T ss_pred CceecCCHHHHHH-hcCCCCEEEEEECCCCChh---HHHHHHHHHHhhccceEEEEeh----hhHHhhCCCCCc-eEECC
Confidence 4555643 46777 6677889999999987654 6689999999988888888876 357889999999 55554
Q ss_pred CC--eEEEEeeCCC-CHHHHHHHHHHHhCCCceecCCHHHHHHhhccCCeEEEEEecCCCCccHHH----HHHHh-ccCC
Q 021976 136 AG--VRQFQFFGER-TRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEE----LAAAS-KLHS 207 (304)
Q Consensus 136 ~g--~~~~~~~g~~-~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~----~~~~a-~~~~ 207 (304)
.+ .....|.|.+ +.+.|.+|+..+..+.+.++ +.+++..+.....++++.|+.+++....+. +..++ ..++
T Consensus 190 ~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~el-t~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (382)
T 2r2j_A 190 PGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLVREI-TFENGEELTEEGLPFLILFHMKEDTESLEIFQNEVARQLISEKG 268 (382)
T ss_dssp SSSSSCCEECCSCTTCHHHHHHHHHHHHSCSSEEC-CHHHHHHHHTTCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT
T ss_pred CCCCCcCcccCCCCCCHHHHHHHHHhcccCceEec-ChhhHHHHhcCCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC
Confidence 42 3457899998 99999999999998999988 556677777777788888888765432233 33333 5667
Q ss_pred ceeEEEe---cCHHHHhhcCCCCCCCCCeEEEEecCCCceecc---cCCCCHHHHHHHHhc
Q 021976 208 DVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPF---RHQFTRLAIANFVTH 262 (304)
Q Consensus 208 ~~~f~~~---~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y---~g~~~~~~i~~fi~~ 262 (304)
++.|+.+ ..+.+++.||++. .++|.++++.... ...| ++..+.+.|.+|+..
T Consensus 269 ~i~f~~id~~~~~~~~~~~gl~~-~~~P~i~i~~~~~--~y~~~~~~~~~~~~~i~~F~~d 326 (382)
T 2r2j_A 269 TINFLHADCDKFRHPLLHIQKTP-ADCPVIAIDSFRH--MYVFGDFKDVLIPGKLKQFVFD 326 (382)
T ss_dssp TSEEEEEETTTTHHHHHHTTCCG-GGCSEEEEECSSC--EEECCCSGGGGSTTHHHHHHHH
T ss_pred eeEEEEEchHHhHHHHHHcCCCc-cCCCEEEEEcchh--cCCCCccccccCHHHHHHHHHH
Confidence 8888866 3456889999973 2489998876543 2233 345577899999984
No 187
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=99.38 E-value=1.7e-13 Score=100.82 Aligned_cols=88 Identities=16% Similarity=0.238 Sum_probs=66.7
Q ss_pred hcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCccc-----HHHHHhCCCccccEEEEEeCCe
Q 021976 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE-----KDLAKEYNILAYPTLYLFVAGV 138 (304)
Q Consensus 64 ~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~-----~~~~~~~~v~~~Pt~~~~~~g~ 138 (304)
+.++++++ ++.+++ ||++||++|+++.|.+++++. .+.++.||.+.+ ..++++||+.++|++ |.+|+
T Consensus 11 ~~~~~~~~-~~~vv~-f~a~~C~~C~~~~~~l~~~~~----~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~ 82 (116)
T 2e7p_A 11 KKAKELAS-SAPVVV-FSKTYCGYCNRVKQLLTQVGA----SYKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGK 82 (116)
T ss_dssp HHHHHHHT-SSSEEE-EECTTCHHHHHHHHHHHHHTC----CCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTE
T ss_pred HHHHHHHc-CCCEEE-EECCCChhHHHHHHHHHHcCC----CeEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCE
Confidence 34455554 445666 999999999999999988754 345666766665 568999999999999 56898
Q ss_pred EEEEeeCCC---CHHHHHHHHHHH
Q 021976 139 RQFQFFGER---TRDVISAWVREK 159 (304)
Q Consensus 139 ~~~~~~g~~---~~~~l~~~i~~~ 159 (304)
.+..+.|.. +.+.|.+++.+.
T Consensus 83 ~v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 83 QIGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp EEECHHHHHHHHHTTCHHHHHHHT
T ss_pred EECChHHHHHHHhCChHHHHHHHc
Confidence 887777654 666788888764
No 188
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.36 E-value=1.4e-12 Score=103.67 Aligned_cols=89 Identities=10% Similarity=0.088 Sum_probs=72.4
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc-------c----HHHHHh-C---------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLAKE-Y--------------- 123 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------~----~~~~~~-~--------------- 123 (304)
++++++|+||++||++|+.+.|.++++++++++ ++.++.|+++. . .+++++ +
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~ 127 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGT 127 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCc
Confidence 678999999999999999999999999999987 69999998863 1 123333 2
Q ss_pred --------CCcccc-------EEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 124 --------NILAYP-------TLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 124 --------~v~~~P-------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
++.++| ++++++ +|+.+.++.|..+.+++.+.|++.+
T Consensus 128 ~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 128 GAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp TSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred cchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 244678 777775 8989999999999999999988654
No 189
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.36 E-value=2e-12 Score=105.21 Aligned_cols=89 Identities=8% Similarity=-0.007 Sum_probs=71.9
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc--------cH---HHHH------hCC---------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL--------EK---DLAK------EYN--------- 124 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~--------~~---~~~~------~~~--------- 124 (304)
+++++||+|||+||++|+++.|.++++++++++ ++.++.|++++ .. +.++ +++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~~i~~f~~~~~~~~~~~~~fp~l~d~ 125 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKC 125 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHHHHHHHHHHTSSCTTCCCSSEEBCCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCCHHHHHHHHHhcccccccccceEEEEEe
Confidence 678999999999999999999999999999986 69999999861 12 2233 443
Q ss_pred --------------------------------------------CccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHH
Q 021976 125 --------------------------------------------ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREK 159 (304)
Q Consensus 125 --------------------------------------------v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~ 159 (304)
|...|+.++++ +|+++.++.|..+.+++.+.|++.
T Consensus 126 d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~~G~i~~~~~g~~~~~~l~~~I~~l 205 (208)
T 2f8a_A 126 EVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEAL 205 (208)
T ss_dssp CCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHH
T ss_pred ecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcCCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 23348788886 899999999999989999888876
Q ss_pred h
Q 021976 160 M 160 (304)
Q Consensus 160 ~ 160 (304)
+
T Consensus 206 l 206 (208)
T 2f8a_A 206 L 206 (208)
T ss_dssp H
T ss_pred h
Confidence 5
No 190
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.03 E-value=7.8e-14 Score=106.30 Aligned_cols=71 Identities=20% Similarity=0.362 Sum_probs=60.6
Q ss_pred CCC-cEEEEEEcCCChhhhhhHHHHHHHHHHhh---CCcEEEEEeCccc-------------------------HHHHHh
Q 021976 72 KNR-NVMVMFYANWCYWSKKLAPEFAAAAKMLK---GEADLVMVDAYLE-------------------------KDLAKE 122 (304)
Q Consensus 72 ~~~-~~lv~f~a~wC~~C~~~~~~~~~~~~~~~---~~~~~~~vd~~~~-------------------------~~~~~~ 122 (304)
+++ +++|+||++||++|+.+.|.+.+++++++ .++.++.|+++.+ ..++++
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAK 103 (143)
Confidence 466 99999999999999999999999999983 3678888887755 368899
Q ss_pred CCCccccEEEEEe-CCeEEEE
Q 021976 123 YNILAYPTLYLFV-AGVRQFQ 142 (304)
Q Consensus 123 ~~v~~~Pt~~~~~-~g~~~~~ 142 (304)
|+|.++|++++++ +|+.+.+
T Consensus 104 ~~v~~~P~~~lid~~G~i~~~ 124 (143)
T 2lus_A 104 YGITGIPALVIVKKDGTLISM 124 (143)
Confidence 9999999999998 8865554
No 191
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.34 E-value=3e-12 Score=103.36 Aligned_cols=89 Identities=13% Similarity=0.247 Sum_probs=77.1
Q ss_pred CCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc----------------------------cHHHHH
Q 021976 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~ 121 (304)
++++++|+|| ++||++|+.+.|.+.++++++++ ++.++.|+.+. +.++++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 5789999999 99999999999999999999976 68999998864 457889
Q ss_pred hCCCc-----cccEEEEEe-CCeEEEEeeCCC----CHHHHHHHHHHHh
Q 021976 122 EYNIL-----AYPTLYLFV-AGVRQFQFFGER----TRDVISAWVREKM 160 (304)
Q Consensus 122 ~~~v~-----~~Pt~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~~~ 160 (304)
.||+. ++|++++++ +|+.+..+.|.. +.+++.+.|++..
T Consensus 112 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 112 DYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99999 999999997 898888888864 6788888887665
No 192
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.34 E-value=4.6e-12 Score=102.00 Aligned_cols=90 Identities=12% Similarity=0.181 Sum_probs=78.8
Q ss_pred CCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc-------------------------cHHHHHhCC
Q 021976 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------------------------EKDLAKEYN 124 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------------------------~~~~~~~~~ 124 (304)
.+++++|+|| ++||++|+.+.|.+.++++++++ ++.++.|+.+. +..+++.|+
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 5789999999 99999999999999999999987 69999998864 346788999
Q ss_pred Cc-----cccEEEEEe-CCeEEEEeeCCC----CHHHHHHHHHHHhC
Q 021976 125 IL-----AYPTLYLFV-AGVRQFQFFGER----TRDVISAWVREKMT 161 (304)
Q Consensus 125 v~-----~~Pt~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~~~~ 161 (304)
+. ++|++++++ +|+.+..+.|.. +.+++.+.|++...
T Consensus 124 v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 124 VLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp CBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred CcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 99 999999997 898888888764 78899999988764
No 193
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.33 E-value=3.6e-12 Score=101.89 Aligned_cols=89 Identities=16% Similarity=0.252 Sum_probs=77.3
Q ss_pred CCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc-------------------------cHHHHHhCC
Q 021976 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------------------------EKDLAKEYN 124 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------------------------~~~~~~~~~ 124 (304)
.+++++|+|| ++||++|+.+.|.+.++++++++ ++.++.|+.+. +..+++.||
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 5789999999 99999999999999999999976 68999998864 356889999
Q ss_pred Cc------cccEEEEEe-CCeEEEEeeCCC----CHHHHHHHHHHHh
Q 021976 125 IL------AYPTLYLFV-AGVRQFQFFGER----TRDVISAWVREKM 160 (304)
Q Consensus 125 v~------~~Pt~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~~~ 160 (304)
+. ++|++++++ +|+.+..+.|.. +.+++.+.|++..
T Consensus 110 v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 110 VLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred CCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 99 999999996 898888888764 6788888887765
No 194
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.33 E-value=5.3e-12 Score=98.10 Aligned_cols=87 Identities=7% Similarity=0.212 Sum_probs=71.8
Q ss_pred CCC-cEEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc-----------------------cHHHHHhCCC
Q 021976 72 KNR-NVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-----------------------EKDLAKEYNI 125 (304)
Q Consensus 72 ~~~-~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-----------------------~~~~~~~~~v 125 (304)
.++ +++|.|| ++||++|+.+.|.+.++++++++ ++.++.|+++. +..+++.||+
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v 113 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGV 113 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTC
T ss_pred cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCC
Confidence 455 9999998 99999999999999999999976 78999998863 5678999999
Q ss_pred c----ccc--EEEEEe-CCeEEEEeeCCC----CHHHHHHHHHH
Q 021976 126 L----AYP--TLYLFV-AGVRQFQFFGER----TRDVISAWVRE 158 (304)
Q Consensus 126 ~----~~P--t~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~ 158 (304)
. ++| ++++++ +|+.+..+.|.. ..+++.+.+++
T Consensus 114 ~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 114 FNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp EETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred ccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 9 999 777776 898888888865 34556555543
No 195
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.32 E-value=3.5e-12 Score=101.35 Aligned_cols=89 Identities=16% Similarity=0.165 Sum_probs=71.4
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc-------c----HHHHHh-CCCc------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLAKE-YNIL------------ 126 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------~----~~~~~~-~~v~------------ 126 (304)
+++++||+|||+||++|+.+.|.+.++++++++ ++.++.|+++. + .+++++ +++.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 116 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGS 116 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCc
Confidence 678999999999999999999999999999987 69999998753 2 345555 4432
Q ss_pred --------------cccE----EEEEe-CCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 127 --------------AYPT----LYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 127 --------------~~Pt----~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+.|+ .++++ +|+.+.++.|..+.+.+.+.|.+.+
T Consensus 117 ~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 169 (180)
T 3kij_A 117 EGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALV 169 (180)
T ss_dssp TCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHH
T ss_pred cccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 2566 66665 8999999999988888877777665
No 196
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.32 E-value=3.7e-12 Score=101.47 Aligned_cols=88 Identities=14% Similarity=0.033 Sum_probs=69.9
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc-------c----HHHHHhC----------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLAKEY---------------- 123 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------~----~~~~~~~---------------- 123 (304)
++++++|+||++||++|+.+.|.+.++++++++ ++.++.|+++. . .++++++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 125 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 125 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSSTT
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCcc
Confidence 679999999999999999999999999999986 69999998762 1 1222222
Q ss_pred ---------------C-----CccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHH
Q 021976 124 ---------------N-----ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREK 159 (304)
Q Consensus 124 ---------------~-----v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~ 159 (304)
| |..+|++++++ +|+.+.++.|..+.+++.+.|++.
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 126 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp SCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGGG
T ss_pred hhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHh
Confidence 3 23359988886 898999999998888888777653
No 197
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.31 E-value=4.5e-12 Score=101.19 Aligned_cols=88 Identities=14% Similarity=0.015 Sum_probs=70.6
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc-------c----HHHHHhCCC--------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLAKEYNI-------------- 125 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------~----~~~~~~~~v-------------- 125 (304)
++++++|+||++||++|+.+.|.+.++++++++ ++.++.|+++. . .++++++++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 127 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 127 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCSEEBCCCBSSSTT
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCCeeeeeeccCChh
Confidence 678999999999999999999999999999986 69999998762 1 234444432
Q ss_pred -----------------c-----cccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHH
Q 021976 126 -----------------L-----AYPTLYLFV-AGVRQFQFFGERTRDVISAWVREK 159 (304)
Q Consensus 126 -----------------~-----~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~ 159 (304)
. .+|++++++ +|+.+.++.|..+.+++.+.|++.
T Consensus 128 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 128 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 184 (185)
T ss_dssp BCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHHH
T ss_pred hhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHHHHh
Confidence 1 248888886 898999999988888888877764
No 198
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=99.30 E-value=5.1e-12 Score=90.23 Aligned_cols=79 Identities=13% Similarity=0.137 Sum_probs=66.1
Q ss_pred CCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCc--ccHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHH
Q 021976 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY--LEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRD 150 (304)
Q Consensus 73 ~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~ 150 (304)
..+.++.|+++||++|+.+.+.++++++ ++.+..+|++ ++++++++|| .++|++ +.+|+.. ..|..+.+
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~----~i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~--~~~g~~~~ 85 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKD----RFILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFL--MMHRVNTS 85 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSS----SSEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEE--EESSCCHH
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhh----CCeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEE--EecCCCHH
Confidence 4678999999999999999999887653 4899999998 8899999999 999986 4578554 35668999
Q ss_pred HHHHHHHHHh
Q 021976 151 VISAWVREKM 160 (304)
Q Consensus 151 ~l~~~i~~~~ 160 (304)
.|.++|.+.+
T Consensus 86 ~l~~~l~~~~ 95 (100)
T 1wjk_A 86 KLEKQLRKLS 95 (100)
T ss_dssp HHHHHHHSSS
T ss_pred HHHHHHHHHH
Confidence 9999998665
No 199
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.29 E-value=2e-11 Score=112.91 Aligned_cols=96 Identities=15% Similarity=0.130 Sum_probs=82.5
Q ss_pred EEcChhcHHHHhc-CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEeCC
Q 021976 59 VSLNGKNFSEFMG-KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAG 137 (304)
Q Consensus 59 ~~l~~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g 137 (304)
..++++.++++.. .++..++.||++||++|+.+.|.+++++..++ ++.+.++|.+++++++++|||.++||+++ +|
T Consensus 102 ~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~vd~~~~~~~~~~~~i~svPt~~i--~g 178 (521)
T 1hyu_A 102 SKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTAIDGGTFQNEITERNVMGVPAVFV--NG 178 (521)
T ss_dssp CCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEEEETTTCHHHHHHTTCCSSSEEEE--TT
T ss_pred CCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEEEechhhHHHHHHhCCCccCEEEE--CC
Confidence 4566777766653 35677999999999999999999999999987 89999999999999999999999999977 88
Q ss_pred eEEEEeeCCCCHHHHHHHHHHH
Q 021976 138 VRQFQFFGERTRDVISAWVREK 159 (304)
Q Consensus 138 ~~~~~~~g~~~~~~l~~~i~~~ 159 (304)
+.+.. |..+.+++.+|+.+.
T Consensus 179 ~~~~~--G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 179 KEFGQ--GRMTLTEIVAKVDTG 198 (521)
T ss_dssp EEEEE--SCCCHHHHHHHHCCS
T ss_pred EEEec--CCCCHHHHHHHHhhc
Confidence 76544 999999999998653
No 200
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.28 E-value=1.7e-10 Score=95.98 Aligned_cols=143 Identities=12% Similarity=0.121 Sum_probs=97.0
Q ss_pred CCCcEEEEEE-cCCChhhh-hhHHHHHHHHHHhhC-Cc-EEEEEeCcc----------------------cHHHHHhCCC
Q 021976 72 KNRNVMVMFY-ANWCYWSK-KLAPEFAAAAKMLKG-EA-DLVMVDAYL----------------------EKDLAKEYNI 125 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~-~~~~~~~~~~~~~~~-~~-~~~~vd~~~----------------------~~~~~~~~~v 125 (304)
++++++|+|| ++||++|+ .+.|.+.++++++++ ++ .++.|+.+. +.++++.||+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 111 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMGM 111 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTC
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHhCc
Confidence 5788999999 99999999 999999999999875 78 899888653 2357788887
Q ss_pred c-----------cccEEEEEeCCeEEEEeeCCC---------CHHHHHHHHHHHhCCCceecCCHHHHHHhhccCCeEEE
Q 021976 126 L-----------AYPTLYLFVAGVRQFQFFGER---------TRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVL 185 (304)
Q Consensus 126 ~-----------~~Pt~~~~~~g~~~~~~~g~~---------~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~v 185 (304)
. ..|+.+++++|+....+.|.. +.+++.+.+.... + ....++
T Consensus 112 ~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~~~~----------------i--~~~~i~ 173 (241)
T 1nm3_A 112 LVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNEPGDPFKVSDADTMLKYLAPQH----------------Q--VQESIS 173 (241)
T ss_dssp EEECTTTTCCEEECCEEEEEETTEEEEEEECCSCSSCCCSSSSHHHHHHHHCTTS----------------C--CCCCEE
T ss_pred eeecccccCcccceeEEEEEECCEEEEEEEeccCCCccceecCHHHHHHHhhhhc----------------c--ccceEE
Confidence 6 347666669998888877753 3444444442110 1 223466
Q ss_pred EEecCCCCccHHHHHHHhccCCceeEEEec-C---HHHHhhcCCCCCCCCCeEE
Q 021976 186 GFLHDLEGMESEELAAASKLHSDVNFYQTT-S---ADVAEFFHIHPKSKRPALI 235 (304)
Q Consensus 186 ~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~-~---~~l~~~~~i~~~~~~P~lv 235 (304)
+|..++|..+.+.-..+....-.+....+. + +++.+.++... .|.++
T Consensus 174 ly~~~~Cp~C~~a~~~L~~~~i~~~~~~i~~~~~~~~l~~~~g~~~---vP~~~ 224 (241)
T 1nm3_A 174 IFTKPGCPFCAKAKQLLHDKGLSFEEIILGHDATIVSVRAVSGRTT---VPQVF 224 (241)
T ss_dssp EEECSSCHHHHHHHHHHHHHTCCCEEEETTTTCCHHHHHHHTCCSS---SCEEE
T ss_pred EEECCCChHHHHHHHHHHHcCCceEEEECCCchHHHHHHHHhCCCC---cCEEE
Confidence 688899987666555544333344444332 2 35777787664 89875
No 201
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=99.25 E-value=2.5e-11 Score=83.78 Aligned_cols=76 Identities=21% Similarity=0.295 Sum_probs=62.2
Q ss_pred EEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccH----HHHHhCC--CccccEEEEEeCCeEEEEeeCCCCH
Q 021976 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEK----DLAKEYN--ILAYPTLYLFVAGVRQFQFFGERTR 149 (304)
Q Consensus 76 ~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~----~~~~~~~--v~~~Pt~~~~~~g~~~~~~~g~~~~ 149 (304)
-++.|+++||++|+++.+.+++++.+++ ++.+..+|+++++ ++.+++| +.++|++ |.+|+.+. | .
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~-~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i~---~---~ 72 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNERD-DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHIG---G---Y 72 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHHS-SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEEE---S---S
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcCC-CceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEEE---C---H
Confidence 3678999999999999999999998876 6999999998764 7899999 9999998 44885543 3 2
Q ss_pred HHHHHHHHHHh
Q 021976 150 DVISAWVREKM 160 (304)
Q Consensus 150 ~~l~~~i~~~~ 160 (304)
+++.+++++..
T Consensus 73 ~~l~~~~~~~~ 83 (85)
T 1ego_A 73 TDFAAWVKENL 83 (85)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 67888887654
No 202
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=99.25 E-value=4.8e-12 Score=86.49 Aligned_cols=63 Identities=17% Similarity=0.183 Sum_probs=50.9
Q ss_pred EEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCc-ccHHHHHhCCCccccEEEEEeCCeEE
Q 021976 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-LEKDLAKEYNILAYPTLYLFVAGVRQ 140 (304)
Q Consensus 76 ~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~-~~~~~~~~~~v~~~Pt~~~~~~g~~~ 140 (304)
.++.||++||++|+.+.|.+++++++++..+.+..||.+ ++.+++++||+.++|++++ +|+.+
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~~~ 66 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGAAF 66 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTEEE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCEEE
Confidence 377899999999999999999988776434555666654 5788899999999999977 88643
No 203
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.24 E-value=4.1e-11 Score=96.52 Aligned_cols=89 Identities=20% Similarity=0.360 Sum_probs=75.5
Q ss_pred CCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc----------------------------cHHHHH
Q 021976 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~ 121 (304)
.+++++|.|| ++||++|+.+.|.+.++++++++ ++.++.|+++. +.++++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 112 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSE 112 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHH
Confidence 5789999999 99999999999999999999976 79999998863 236889
Q ss_pred hCCCc------cccEEEEEe-CCeEEEEeeCC----CCHHHHHHHHHHHh
Q 021976 122 EYNIL------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (304)
Q Consensus 122 ~~~v~------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (304)
.||+. .+|++++++ +|+.+..+.|. .+.+++.+.|+...
T Consensus 113 ~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 113 DYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 99998 899999996 89888887774 45788888887654
No 204
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.22 E-value=4.7e-11 Score=96.48 Aligned_cols=90 Identities=12% Similarity=0.077 Sum_probs=70.7
Q ss_pred CCCcEEEEEEcCCChh-hhhhHHHHHHHHHHhh----CCcEEEEEeCcc----------------------------cHH
Q 021976 72 KNRNVMVMFYANWCYW-SKKLAPEFAAAAKMLK----GEADLVMVDAYL----------------------------EKD 118 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~-C~~~~~~~~~~~~~~~----~~~~~~~vd~~~----------------------------~~~ 118 (304)
.+++++|+||++||++ |+.+.|.+.++.++++ +++.++.|+++. ...
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 5789999999999998 9999999999888775 378888888763 135
Q ss_pred HHHhCCCc-ccc---------------EEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 119 LAKEYNIL-AYP---------------TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 119 ~~~~~~v~-~~P---------------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
+++.|||. +.| ++++++ +|+.+..+.|..+.+.+.+.|.+.+.
T Consensus 120 ~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~ 179 (200)
T 2b7k_A 120 ACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVK 179 (200)
T ss_dssp HHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHH
T ss_pred HHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 77889987 444 667776 89888899998888888888877664
No 205
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.22 E-value=8.1e-11 Score=92.07 Aligned_cols=88 Identities=9% Similarity=0.175 Sum_probs=72.3
Q ss_pred CCCcEEEEEEcCC-ChhhhhhHHHHHHHHHHhhCCcEEEEEeCcc-----------------------cHHHHHhCCCcc
Q 021976 72 KNRNVMVMFYANW-CYWSKKLAPEFAAAAKMLKGEADLVMVDAYL-----------------------EKDLAKEYNILA 127 (304)
Q Consensus 72 ~~~~~lv~f~a~w-C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~-----------------------~~~~~~~~~v~~ 127 (304)
.+++++|.||++| |++|+.+.|.+.++++++ +++.++.|+.+. +.++++.||+..
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~ 121 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYI 121 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBB
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCcc
Confidence 5789999999999 999999999999999999 688888888752 346788999987
Q ss_pred ------ccEEEEEe-CCeEEEEeeCC-----CCHHHHHHHHHHHh
Q 021976 128 ------YPTLYLFV-AGVRQFQFFGE-----RTRDVISAWVREKM 160 (304)
Q Consensus 128 ------~Pt~~~~~-~g~~~~~~~g~-----~~~~~l~~~i~~~~ 160 (304)
.|++++++ +|+.+..+.|. .+.+++.+.|++.+
T Consensus 122 ~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 122 KELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp TTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred ccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 49999987 89888888753 24477888877654
No 206
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.21 E-value=4.4e-11 Score=96.78 Aligned_cols=89 Identities=17% Similarity=0.268 Sum_probs=75.5
Q ss_pred CCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc----------------------------cHHHHH
Q 021976 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~ 121 (304)
.+++++|+|| ++||++|+.+.|.+.++++++++ ++.++.|+++. +.++++
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 114 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMK 114 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHH
Confidence 5789999999 99999999999999999999976 79999998864 346888
Q ss_pred hCCCc------cccEEEEEe-CCeEEEEeeCC----CCHHHHHHHHHHHh
Q 021976 122 EYNIL------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (304)
Q Consensus 122 ~~~v~------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (304)
.||+. ++|++++++ +|+.+..+.|. .+.+++.+.|++..
T Consensus 115 ~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 115 SYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 99999 999999996 89888777664 45688888887654
No 207
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.20 E-value=1.5e-10 Score=94.36 Aligned_cols=89 Identities=12% Similarity=0.098 Sum_probs=72.1
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc--------c---HHHHH------hCCCc-------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL--------E---KDLAK------EYNIL------- 126 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~--------~---~~~~~------~~~v~------- 126 (304)
+++++||+|||+||++|+ ++|.++++++++++ ++.++.|+|++ . .++++ ++++.
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~~~~~~~fpll~d~ 133 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKG 133 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHTSSCTTCCCSSEEBCCC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCHHHHHHHHHhccchhccCccceeEeee
Confidence 689999999999999999 89999999999976 79999998752 1 33555 55431
Q ss_pred ------------------------------------------cccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 127 ------------------------------------------AYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 127 ------------------------------------------~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
..|+.++++ +|+.+.+|.|..+.+++.+.|++.+.
T Consensus 134 d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~~~g~~~~~~l~~~I~~ll~ 211 (215)
T 2i3y_A 134 DVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLK 211 (215)
T ss_dssp CSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHHHGG
T ss_pred ccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 016778886 89999999999899999999988764
No 208
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.20 E-value=4.1e-11 Score=98.26 Aligned_cols=89 Identities=18% Similarity=0.354 Sum_probs=75.5
Q ss_pred CCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc----------------------------cHHHHH
Q 021976 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~ 121 (304)
.+++++|.|| ++||++|+.+.|.+.++++++++ ++.++.|+++. +.++++
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~ 134 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISR 134 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHH
Confidence 4699999999 99999999999999999999975 78999998753 346889
Q ss_pred hCCCc------cccEEEEEe-CCeEEEEeeCC----CCHHHHHHHHHHHh
Q 021976 122 EYNIL------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (304)
Q Consensus 122 ~~~v~------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (304)
.||+. .+|++++++ +|+.+..+.|. .+.+++.+.|+...
T Consensus 135 ~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 135 DYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 99999 999999996 89888777665 46688888887665
No 209
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.19 E-value=8.3e-11 Score=95.94 Aligned_cols=89 Identities=18% Similarity=0.313 Sum_probs=74.5
Q ss_pred CCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc----------------------------cHHHHH
Q 021976 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~ 121 (304)
++++++|+|| ++||++|+.+.|.+.++++++++ ++.++.|+.+. +.++++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 5789999999 99999999999999999999974 78888888753 346889
Q ss_pred hCCCc-----cccEEEEEe-CCeEEEEeeCC----CCHHHHHHHHHHHh
Q 021976 122 EYNIL-----AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (304)
Q Consensus 122 ~~~v~-----~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (304)
+||+. .+|++++++ +|+.+..+.|. .+.+++.+.|+...
T Consensus 131 ~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 131 DYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99999 899999997 89888877664 35788888887654
No 210
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.19 E-value=5.5e-11 Score=95.36 Aligned_cols=89 Identities=20% Similarity=0.320 Sum_probs=74.5
Q ss_pred CCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc----------------------------cHHHHH
Q 021976 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~ 121 (304)
++++++|+|| ++||++|+.+.|.+.++++++++ ++.++.|+++. +.++++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 5789999999 99999999999999999999964 78899988763 346889
Q ss_pred hCCCc-----cccEEEEEe-CCeEEEEeeCC----CCHHHHHHHHHHHh
Q 021976 122 EYNIL-----AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (304)
Q Consensus 122 ~~~v~-----~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (304)
.||+. .+|++++++ +|+.+..+.|. .+.+++.+.|+...
T Consensus 110 ~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 110 SYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 99999 899999996 89888888774 34677777776554
No 211
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.19 E-value=9.3e-11 Score=92.23 Aligned_cols=90 Identities=17% Similarity=0.186 Sum_probs=71.8
Q ss_pred CCCcEEEEEEcCCCh-hhhhhHHHHHHHHHHhhC---CcEEEEEeCcc---cH-------------------------HH
Q 021976 72 KNRNVMVMFYANWCY-WSKKLAPEFAAAAKMLKG---EADLVMVDAYL---EK-------------------------DL 119 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~-~C~~~~~~~~~~~~~~~~---~~~~~~vd~~~---~~-------------------------~~ 119 (304)
++++++|+||++||+ +|+...|.+.++.+++++ ++.++.|+++. .+ ++
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 678999999999999 999999999999999876 39999999862 11 11
Q ss_pred HHh----------------CCCccccEEEEEe-CCeEEEEeeCCC--CHHHHHHHHHHHhC
Q 021976 120 AKE----------------YNILAYPTLYLFV-AGVRQFQFFGER--TRDVISAWVREKMT 161 (304)
Q Consensus 120 ~~~----------------~~v~~~Pt~~~~~-~g~~~~~~~g~~--~~~~l~~~i~~~~~ 161 (304)
.+. +++...|++++++ +|+.+..+.|.. +.+++.+.|++.+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHTC
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 222 2356689888886 898888999975 58899999988764
No 212
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.18 E-value=1.6e-10 Score=94.86 Aligned_cols=87 Identities=13% Similarity=0.361 Sum_probs=72.1
Q ss_pred CCCcEEEEEEc-CCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc----------------------------cHHHHH
Q 021976 72 KNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (304)
Q Consensus 72 ~~~~~lv~f~a-~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~ 121 (304)
++++++|+||+ +||++|+.+.|.+.++++++++ ++.++.|+++. +..+++
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 67899999997 9999999999999999999986 69999998864 235788
Q ss_pred hCCCc------cccEEEEEe-CCeEEEEeeCC----CCHHHHHHHHHH
Q 021976 122 EYNIL------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVRE 158 (304)
Q Consensus 122 ~~~v~------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~ 158 (304)
.|++. .+|++++++ +|+++..+.|. ...+++.+.++.
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 89998 899999997 89888888765 345666666654
No 213
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.16 E-value=1.6e-10 Score=89.94 Aligned_cols=88 Identities=13% Similarity=0.208 Sum_probs=70.4
Q ss_pred CCCcEEEEEEc-CCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc---------------------cHHHHHhCCCcc-
Q 021976 72 KNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL---------------------EKDLAKEYNILA- 127 (304)
Q Consensus 72 ~~~~~lv~f~a-~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~---------------------~~~~~~~~~v~~- 127 (304)
.+++++|.||+ +||++|+...|.+.++.+++++ ++.++.|+++. +.++++.||+..
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 113 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKE 113 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccc
Confidence 57799999998 9999999999999999999976 68899888762 336788899887
Q ss_pred -----------ccEEEEEe-CCeEEEEeeCCCC---HHHHHHHHHHH
Q 021976 128 -----------YPTLYLFV-AGVRQFQFFGERT---RDVISAWVREK 159 (304)
Q Consensus 128 -----------~Pt~~~~~-~g~~~~~~~g~~~---~~~l~~~i~~~ 159 (304)
.|++++++ +|+.+..+.|... .+++.+.+++.
T Consensus 114 ~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 114 KNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred cccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 89999997 8988877765433 35566655543
No 214
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.15 E-value=1.4e-10 Score=91.57 Aligned_cols=72 Identities=11% Similarity=0.197 Sum_probs=61.5
Q ss_pred CCCcEEEEEEcCC-ChhhhhhHHHHHHHHHHhhCCcEEEEEeCcc----------------------cHHHHHhCCCccc
Q 021976 72 KNRNVMVMFYANW-CYWSKKLAPEFAAAAKMLKGEADLVMVDAYL----------------------EKDLAKEYNILAY 128 (304)
Q Consensus 72 ~~~~~lv~f~a~w-C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~----------------------~~~~~~~~~v~~~ 128 (304)
++++++|+||++| |++|+.+.|.+.+++++ .++.++.|+.+. +..+++.||+...
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~ 120 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIA 120 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBC
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCccc
Confidence 5789999999999 99999999999999988 478899998762 3468889999887
Q ss_pred ---------cEEEEEe-CCeEEEEeeC
Q 021976 129 ---------PTLYLFV-AGVRQFQFFG 145 (304)
Q Consensus 129 ---------Pt~~~~~-~g~~~~~~~g 145 (304)
|++++++ +|+++..+.|
T Consensus 121 ~~~~~g~~~p~~~lid~~G~I~~~~~g 147 (175)
T 1xvq_A 121 DGPMAGLLARAIVVIGADGNVAYTELV 147 (175)
T ss_dssp SSTTTTSBCSEEEEECTTSBEEEEEEC
T ss_pred ccccCCcccceEEEECCCCeEEEEEEC
Confidence 8888887 8988888864
No 215
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.14 E-value=2.4e-10 Score=92.70 Aligned_cols=88 Identities=11% Similarity=0.012 Sum_probs=70.8
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc-----------cHHHHH------hCCCc-------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-----------EKDLAK------EYNIL------- 126 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-----------~~~~~~------~~~v~------- 126 (304)
+++++||+|||+||++| .++|.+.++++++++ ++.++.|++++ -.++++ ++++.
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~~~~~~~fp~l~d~ 115 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKG 115 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHHHHHHHHHHTSSCTTCCCSSEEBCCC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHHHHHHHHHhcchhhccCccceeeeEe
Confidence 68999999999999999 789999999999976 79999998752 123455 55432
Q ss_pred -------------------------c-----------------ccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 127 -------------------------A-----------------YPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 127 -------------------------~-----------------~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+ .|+.++++ +|+.+.+|.|..+.+++.+.|++.+
T Consensus 116 d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~~~g~~~~~~l~~~I~~ll 192 (207)
T 2r37_A 116 DVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYM 192 (207)
T ss_dssp CSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHHHH
T ss_pred ccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 0 16778886 8989999999989999998888776
No 216
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=99.13 E-value=3.1e-10 Score=89.50 Aligned_cols=83 Identities=13% Similarity=0.151 Sum_probs=67.4
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeC--------------------------------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA-------------------------------------- 113 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~-------------------------------------- 113 (304)
+++++++.||++||++|+++.|.+.++.+++++ +.+...+.
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~~ 99 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN-VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKAN 99 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC-EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCC
Confidence 467899999999999999999999999998874 55544442
Q ss_pred -------------------------------cccHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 114 -------------------------------YLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 114 -------------------------------~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
..+.++++++||.++||+++ +|+ .+.|..+.+.+.+.|.+.+
T Consensus 100 ~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g~---~~~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 100 ETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--EDA---LVPGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTE---EECSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CCE---EeeCCCCHHHHHHHHHHHH
Confidence 23345678899999999987 773 6679999999999998765
No 217
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=99.13 E-value=1.4e-10 Score=94.86 Aligned_cols=82 Identities=13% Similarity=0.246 Sum_probs=63.6
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEe---------------------------------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVD--------------------------------------- 112 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd--------------------------------------- 112 (304)
+++++++.||++||++|++++|.++++.+. ++.+..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~---~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~ 161 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL---GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPA 161 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChh
Confidence 357899999999999999999999998763 34443322
Q ss_pred -C----cccHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 113 -A----YLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 113 -~----~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
| +++.++++++||+++||+ ++.+|. .+.|..+.++|.++|.+..
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gtPt~-v~~dG~---~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 162 SCDVDIADHYALGVQLGVSGTPAV-VLSNGT---LVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CCSCCHHHHHHHHHHHTCCSSSEE-ECTTSC---EEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCccCEE-EEcCCe---EecCCCCHHHHHHHHHHhh
Confidence 1 234568899999999998 556773 5679999999999987653
No 218
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.10 E-value=7.9e-10 Score=85.69 Aligned_cols=76 Identities=18% Similarity=0.168 Sum_probs=62.0
Q ss_pred CCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc---------------------cHHHHHhCCCcccc
Q 021976 73 NRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL---------------------EKDLAKEYNILAYP 129 (304)
Q Consensus 73 ~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~---------------------~~~~~~~~~v~~~P 129 (304)
+++++|+|| ++||++|+.+.|.+.++.+++++ + .++.|+++. +.++++.||+...|
T Consensus 35 ~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p 113 (159)
T 2a4v_A 35 NRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTP 113 (159)
T ss_dssp CSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSS
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCcccc
Confidence 457899987 99999999999999999999976 6 788887643 34678889999988
Q ss_pred -------EEEEEeCCeEEEEeeCCCCHH
Q 021976 130 -------TLYLFVAGVRQFQFFGERTRD 150 (304)
Q Consensus 130 -------t~~~~~~g~~~~~~~g~~~~~ 150 (304)
++++ ++|+....+.|.....
T Consensus 114 ~~g~~~~~~li-~~G~i~~~~~g~~~~~ 140 (159)
T 2a4v_A 114 LSGSIRSHFIF-VDGKLKFKRVKISPEV 140 (159)
T ss_dssp SSCBCCEEEEE-ETTEEEEEEESCCHHH
T ss_pred cCCccceEEEE-cCCEEEEEEccCCccc
Confidence 5666 9998888888865543
No 219
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.08 E-value=8e-10 Score=79.45 Aligned_cols=96 Identities=20% Similarity=0.279 Sum_probs=75.2
Q ss_pred ceecCCHHHHHHhhcc--CCeEEEEEecCCCCcc---HHHHHHHhccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEE
Q 021976 164 TYSITTTDEAERILTV--ESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (304)
Q Consensus 164 ~~~l~~~~~~~~~~~~--~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv 235 (304)
+.++.+.+++++.+.+ +++++|.|+++||+++ ...+.+++....++.|..+ .+++++++|+|++ +|+++
T Consensus 2 V~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~V~~---~PT~~ 78 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSDVVFLKVDVDECEDIAQDNQIAC---MPTFL 78 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTCCB---SSEEE
T ss_pred eEEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCCeEEEEEecccCHHHHHHcCCCe---ecEEE
Confidence 3567888999888864 5678888999999985 4445566655566777654 6889999999997 99999
Q ss_pred EEecCCCceecccCCCCHHHHHHHHhcCC
Q 021976 236 FLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (304)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 264 (304)
+|+++. ....+.| .+.+.|.+||++|+
T Consensus 79 ~~~~G~-~v~~~~G-~~~~~l~~~i~k~K 105 (105)
T 3zzx_A 79 FMKNGQ-KLDSLSG-ANYDKLLELVEKNK 105 (105)
T ss_dssp EEETTE-EEEEEES-CCHHHHHHHHHHHC
T ss_pred EEECCE-EEEEEeC-cCHHHHHHHHHhcC
Confidence 998664 5567778 58999999999864
No 220
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.08 E-value=1.3e-10 Score=90.16 Aligned_cols=87 Identities=20% Similarity=0.337 Sum_probs=62.1
Q ss_pred CCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc---------------------cHHHHHhCCCc--
Q 021976 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL---------------------EKDLAKEYNIL-- 126 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~---------------------~~~~~~~~~v~-- 126 (304)
++++++|+|| ++||++|+.+.|.+.++.+++++ ++.++.|+.+. +.+++++|||.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~~ 108 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVAWE 108 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEE
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCccc
Confidence 6789999999 99999999999999999988876 78888888653 33567788874
Q ss_pred ---------cccEEEEEe-CCeEEEEeeC-----CCCHHHHHHHHHH
Q 021976 127 ---------AYPTLYLFV-AGVRQFQFFG-----ERTRDVISAWVRE 158 (304)
Q Consensus 127 ---------~~Pt~~~~~-~g~~~~~~~g-----~~~~~~l~~~i~~ 158 (304)
..|++++++ +|++...+.| ..+.+++.+.|+.
T Consensus 109 ~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 109 FPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp CTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred cccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHH
Confidence 468888887 8977766543 3466778777754
No 221
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.04 E-value=1.5e-09 Score=85.89 Aligned_cols=102 Identities=11% Similarity=0.058 Sum_probs=74.3
Q ss_pred cEEcChhcHHHHhcCCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc--------------------
Q 021976 58 VVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------------------- 115 (304)
Q Consensus 58 v~~l~~~~~~~~~~~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------------------- 115 (304)
+.+.+++.+...--.+++++|.|| ++||++|....|.+.++.+++++ ++.++.|.++.
T Consensus 36 l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D 115 (179)
T 3ixr_A 36 LMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSD 115 (179)
T ss_dssp EEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEEC
T ss_pred EECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEEC
Confidence 444455444322235778999998 99999999999999999999987 68888888753
Q ss_pred -cHHHHHhCCCcc------------ccEEEEEe-CCeEEEEeeCCC---CHHHHHHHHHHH
Q 021976 116 -EKDLAKEYNILA------------YPTLYLFV-AGVRQFQFFGER---TRDVISAWVREK 159 (304)
Q Consensus 116 -~~~~~~~~~v~~------------~Pt~~~~~-~g~~~~~~~g~~---~~~~l~~~i~~~ 159 (304)
+.++++.||+.. .|++++++ +|+++..+.|.. ..+++.+.|++.
T Consensus 116 ~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 116 SDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp TTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred CchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 235788888864 58899997 898887776533 345566666543
No 222
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.03 E-value=9.7e-10 Score=90.02 Aligned_cols=89 Identities=19% Similarity=0.354 Sum_probs=72.0
Q ss_pred CCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc----------------------------cHHHHH
Q 021976 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~ 121 (304)
++++++|+|| ++||++|+.+.|.+.++++++++ ++.++.|+.+. +..+++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 5789999999 99999999999999999999964 78888887643 124677
Q ss_pred hCCC-----ccccEEEEEe-CCeEEEEeeCC----CCHHHHHHHHHHHh
Q 021976 122 EYNI-----LAYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (304)
Q Consensus 122 ~~~v-----~~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (304)
.||+ ...|++++++ +|+++..+.|. .+.+++.+.|++..
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 7888 3689999997 89888777663 56788888887654
No 223
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=99.03 E-value=5.4e-10 Score=90.93 Aligned_cols=80 Identities=11% Similarity=0.179 Sum_probs=62.7
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeC--------------------------------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA-------------------------------------- 113 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~-------------------------------------- 113 (304)
+++++++.|+++||++|++++|.++++.+. ++.+..+..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~---~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL---GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 357899999999999999999999997652 344432211
Q ss_pred ------cccHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHHHH
Q 021976 114 ------YLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVRE 158 (304)
Q Consensus 114 ------~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~ 158 (304)
+++.++++++||+++||+++ .+|+ .+.|..+.++|.++|.+
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~---~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFGVRGTPSIVT-STGE---LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC---CCCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE---EecCCCCHHHHHHHHHh
Confidence 13456789999999999987 7784 67899999999999875
No 224
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.02 E-value=1.9e-09 Score=85.86 Aligned_cols=89 Identities=13% Similarity=0.185 Sum_probs=71.2
Q ss_pred CCCcEEEEEEc-CCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCccc-------------------------HHHHHhCC
Q 021976 72 KNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE-------------------------KDLAKEYN 124 (304)
Q Consensus 72 ~~~~~lv~f~a-~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-------------------------~~~~~~~~ 124 (304)
++++++|+||+ +||++|+.+.|.+.++++++++ ++.++.|+.+.. ..+++.||
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 108 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFD 108 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhC
Confidence 57899999995 9999999999999999999875 788888876531 24566777
Q ss_pred Cc------cccEEEEEe-CCeEEEEeeCCC----CHHHHHHHHHHHh
Q 021976 125 IL------AYPTLYLFV-AGVRQFQFFGER----TRDVISAWVREKM 160 (304)
Q Consensus 125 v~------~~Pt~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~~~ 160 (304)
+. ..|++++++ +|+....+.|.. +.+++.+.|++..
T Consensus 109 v~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 109 NMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 76 369999997 898888887753 5788888887654
No 225
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.01 E-value=2.1e-09 Score=83.69 Aligned_cols=86 Identities=8% Similarity=0.127 Sum_probs=66.7
Q ss_pred CCCcEEEEEEc-CCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcc-----------------------cHHHHHhCCCc-
Q 021976 72 KNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL-----------------------EKDLAKEYNIL- 126 (304)
Q Consensus 72 ~~~~~lv~f~a-~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~-----------------------~~~~~~~~~v~- 126 (304)
++++++|+||+ +||++|..+.|.+.++++++ .++.++.|+.+. +..+++.||+.
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~ 119 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYALLI 119 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHHHHHTCBC
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHHHHhCCcc
Confidence 57899999995 99999999999999999888 578888877642 23567777776
Q ss_pred ---c--ccEEEEEe-CCeEEEEeeCC-----CCHHHHHHHHHH
Q 021976 127 ---A--YPTLYLFV-AGVRQFQFFGE-----RTRDVISAWVRE 158 (304)
Q Consensus 127 ---~--~Pt~~~~~-~g~~~~~~~g~-----~~~~~l~~~i~~ 158 (304)
+ .|++++++ +|+.+..+.|. .+.+++.+.|++
T Consensus 120 ~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 120 NEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp TTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred ccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 3 39999997 89888888763 334677777654
No 226
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.01 E-value=1.9e-10 Score=89.80 Aligned_cols=96 Identities=16% Similarity=0.295 Sum_probs=73.7
Q ss_pred HHHHhcCCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc---------------------cHHHHHh
Q 021976 66 FSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL---------------------EKDLAKE 122 (304)
Q Consensus 66 ~~~~~~~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~---------------------~~~~~~~ 122 (304)
+.+...+++++++.|| ++||++|..+.|.+.++.+++++ ++.++.|+.+. +.++++.
T Consensus 26 Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ 105 (164)
T 4gqc_A 26 LYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKL 105 (164)
T ss_dssp HHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHH
T ss_pred HHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHH
Confidence 3455567888988888 99999999999999999999876 78888888653 3457888
Q ss_pred CCCc----------cccEEEEEe-CCeEEEEeeC-----CCCHHHHHHHHHHHhC
Q 021976 123 YNIL----------AYPTLYLFV-AGVRQFQFFG-----ERTRDVISAWVREKMT 161 (304)
Q Consensus 123 ~~v~----------~~Pt~~~~~-~g~~~~~~~g-----~~~~~~l~~~i~~~~~ 161 (304)
|||. ..|++++++ +|++...+.+ ..+.+++.+.+++..+
T Consensus 106 ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~~ 160 (164)
T 4gqc_A 106 YNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIAG 160 (164)
T ss_dssp TTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHHH
T ss_pred cCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHhc
Confidence 8874 368888887 8877766644 2467788888776653
No 227
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.01 E-value=2.7e-09 Score=83.73 Aligned_cols=91 Identities=7% Similarity=-0.045 Sum_probs=71.9
Q ss_pred CCCcEEEEEEcCCCh-hhhhhHHHHHHHHHHhh---CCcEEEEEeCcc-------------------------------c
Q 021976 72 KNRNVMVMFYANWCY-WSKKLAPEFAAAAKMLK---GEADLVMVDAYL-------------------------------E 116 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~-~C~~~~~~~~~~~~~~~---~~~~~~~vd~~~-------------------------------~ 116 (304)
.+++++|+||++||+ .|..+.|.+.++.++++ .++.++.|.++. .
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~ 106 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDL 106 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHH
T ss_pred CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHH
Confidence 489999999999997 69999999999999995 268888877641 1
Q ss_pred HHHHHhCCC---------ccccEEEEEe-CCeEEEEeeCC-CCHHHHHHHHHHHhCC
Q 021976 117 KDLAKEYNI---------LAYPTLYLFV-AGVRQFQFFGE-RTRDVISAWVREKMTL 162 (304)
Q Consensus 117 ~~~~~~~~v---------~~~Pt~~~~~-~g~~~~~~~g~-~~~~~l~~~i~~~~~~ 162 (304)
.++++.||+ ...|++++++ +|+.+..|.|. .+.+++.+.|.+....
T Consensus 107 ~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~~ 163 (170)
T 3me7_A 107 FKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARGE 163 (170)
T ss_dssp HHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTTC
T ss_pred HHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhcc
Confidence 245666553 3457888887 89888788885 7899999999888754
No 228
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.01 E-value=2.2e-09 Score=87.35 Aligned_cols=89 Identities=12% Similarity=0.308 Sum_probs=72.0
Q ss_pred CCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCccc----------------------------HHHHH
Q 021976 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE----------------------------KDLAK 121 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~----------------------------~~~~~ 121 (304)
.+++++|+|| ++||++|..+.|.+.++++++++ ++.++.|+++.. .++++
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 5789999999 99999999999999999999976 788888876421 24677
Q ss_pred hCCCc------cccEEEEEe-CCeEEEEeeCC----CCHHHHHHHHHHHh
Q 021976 122 EYNIL------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (304)
Q Consensus 122 ~~~v~------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (304)
.||+. ..|++++++ +|+++..+.|. .+.+++.+.|+...
T Consensus 127 ~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 127 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 78884 699999997 89888777664 46778888877654
No 229
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.96 E-value=2.4e-09 Score=88.99 Aligned_cols=94 Identities=15% Similarity=0.187 Sum_probs=74.8
Q ss_pred HHHhcCCC-cEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc---------------------------cH
Q 021976 67 SEFMGKNR-NVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL---------------------------EK 117 (304)
Q Consensus 67 ~~~~~~~~-~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~---------------------------~~ 117 (304)
.+.+.+++ .+|+.||++||++|..+.+.+.++++++++ ++.++.|+++. +.
T Consensus 27 ~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~ 106 (249)
T 3a2v_A 27 DHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQG 106 (249)
T ss_dssp HHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTS
T ss_pred HHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCch
Confidence 44443566 466789999999999999999999999976 79999998863 24
Q ss_pred HHHHhCCCc-------cccEEEEEe-CCeEEEEeeCC----CCHHHHHHHHHHHh
Q 021976 118 DLAKEYNIL-------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (304)
Q Consensus 118 ~~~~~~~v~-------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (304)
++++.||+. .+|++++++ +|+....+.|. ++.+++.+.|....
T Consensus 107 ~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 107 TVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp HHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHH
Confidence 578889987 899999997 88877776665 47888888887654
No 230
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.95 E-value=1.8e-08 Score=74.36 Aligned_cols=96 Identities=14% Similarity=0.196 Sum_probs=81.0
Q ss_pred CCcEEc-ChhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEE
Q 021976 56 KDVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (304)
Q Consensus 56 ~~v~~l-~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 134 (304)
..+..+ +.+++++.+..+++++|-|+++||++| .+.|.++|+.+ +.+.|+.++ ++++++++++. .|++++|
T Consensus 21 ~~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d~~F~~t~---~~~v~~~~~v~-~~~vvlf 92 (124)
T 2l4c_A 21 QEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-PGVSFGIST---DSEVLTHYNIT-GNTICLF 92 (124)
T ss_dssp CCCEECCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TTSEEEEEC---CHHHHHHTTCC-SSCEEEE
T ss_pred CcceEcCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-CCceEEEEC---hHHHHHHcCCC-CCeEEEE
Confidence 344445 457888999889999999999999998 67899999999 689999886 57899999998 8999999
Q ss_pred eCC-eEEEEeeC----CCCHHHHHHHHHHH
Q 021976 135 VAG-VRQFQFFG----ERTRDVISAWVREK 159 (304)
Q Consensus 135 ~~g-~~~~~~~g----~~~~~~l~~~i~~~ 159 (304)
+++ +....|.| ..+.+.|.+||..+
T Consensus 93 kkfde~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 93 RLVDNEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp ETTTTEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred EcCCCCceeecCcccCCCCHHHHHHHHHHh
Confidence 975 35667886 78999999999875
No 231
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.94 E-value=2.8e-09 Score=85.27 Aligned_cols=87 Identities=16% Similarity=0.218 Sum_probs=69.8
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCc-------------------------------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------------------------------------- 114 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~------------------------------------- 114 (304)
+++++++.||+.||++|+.+.|.+.++.+++++++.+..+...
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~~~~~~~~aa~a~~aa~~~g~~~~~~~~lf~~~~~~~~ 103 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPALFGGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHKEHK 103 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECCCSTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTSCC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEehhhccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCc
Confidence 4688999999999999999999999999999877777655441
Q ss_pred ------------------------------------ccHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHHHH
Q 021976 115 ------------------------------------LEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVRE 158 (304)
Q Consensus 115 ------------------------------------~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~ 158 (304)
.+...++++||.++||+++ +|+......|..+.+.+.+.|..
T Consensus 104 ~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~v--ng~~~~~~~G~~~~e~l~~~i~~ 181 (192)
T 3h93_A 104 KLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAYQVTGVPTMVV--NGKYRFDIGSAGGPEETLKLADY 181 (192)
T ss_dssp CCCSHHHHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEEEHHHHTSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHHHHHhhCHHHHHHHHHHHHHHHHhCCCCCCeEEE--CCEEEecccccCCHHHHHHHHHH
Confidence 0113467789999999987 88766666688899999888876
Q ss_pred Hh
Q 021976 159 KM 160 (304)
Q Consensus 159 ~~ 160 (304)
.+
T Consensus 182 l~ 183 (192)
T 3h93_A 182 LI 183 (192)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 232
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.94 E-value=4.1e-09 Score=81.98 Aligned_cols=75 Identities=11% Similarity=0.045 Sum_probs=60.4
Q ss_pred CCCcEEEEEE-cCCChhhh-hhHHHHHHHHHHhhC-CcE-EEEEeCcc-----------------------cHHHHHhCC
Q 021976 72 KNRNVMVMFY-ANWCYWSK-KLAPEFAAAAKMLKG-EAD-LVMVDAYL-----------------------EKDLAKEYN 124 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~-~~~~~~~~~~~~~~~-~~~-~~~vd~~~-----------------------~~~~~~~~~ 124 (304)
++++++|+|| ++||++|. .+.|.+.++++++++ ++. ++.|+.+. +.++++.||
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYTHALG 113 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHHHHcC
Confidence 5789999999 89999999 999999999999864 677 77777542 235778888
Q ss_pred Cc------c-----ccEEEEEeCCeEEEEeeCC
Q 021976 125 IL------A-----YPTLYLFVAGVRQFQFFGE 146 (304)
Q Consensus 125 v~------~-----~Pt~~~~~~g~~~~~~~g~ 146 (304)
+. + .|+++++++|+....+.|.
T Consensus 114 v~~~~~~~g~~~~~~p~~~vid~G~i~~~~~~~ 146 (162)
T 1tp9_A 114 LELDLQEKGLGTRSRRFALLVDDLKVKAANIEG 146 (162)
T ss_dssp CEEEETTTTSEEEECCEEEEEETTEEEEEEECS
T ss_pred cccccccCCCCccceeEEEEEECCEEEEEEeeC
Confidence 76 2 7988888888877777665
No 233
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.94 E-value=4.1e-09 Score=87.39 Aligned_cols=88 Identities=14% Similarity=0.306 Sum_probs=71.2
Q ss_pred CCCcEEEEEEc-CCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc----------------------------cHHHHH
Q 021976 72 KNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (304)
Q Consensus 72 ~~~~~lv~f~a-~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~ 121 (304)
.+++++|+||+ +||++|..+.|.+.++++++++ ++.++.|+++. +.++++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 57899999999 9999999999999999999986 78888888753 135778
Q ss_pred hCCCc------cccEEEEEe-CCeEEEEeeC----CCCHHHHHHHHHHH
Q 021976 122 EYNIL------AYPTLYLFV-AGVRQFQFFG----ERTRDVISAWVREK 159 (304)
Q Consensus 122 ~~~v~------~~Pt~~~~~-~g~~~~~~~g----~~~~~~l~~~i~~~ 159 (304)
.||+. .+|++++++ +|++...+.| ..+.+++.+.|+..
T Consensus 156 ~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 88987 689999997 8987777655 34567777777654
No 234
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.92 E-value=7.3e-09 Score=82.26 Aligned_cols=75 Identities=13% Similarity=0.104 Sum_probs=57.6
Q ss_pred CCC-cEEEEEEcCCChhhhh-hHHHHHHHHHHhhC-CcE-EEEEeCcc-----------------------cHHHHHhCC
Q 021976 72 KNR-NVMVMFYANWCYWSKK-LAPEFAAAAKMLKG-EAD-LVMVDAYL-----------------------EKDLAKEYN 124 (304)
Q Consensus 72 ~~~-~~lv~f~a~wC~~C~~-~~~~~~~~~~~~~~-~~~-~~~vd~~~-----------------------~~~~~~~~~ 124 (304)
+++ .+|+.||++||++|+. +.|.+.++++++++ ++. ++.|+.+. +.+++++||
T Consensus 55 ~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yG 134 (184)
T 3uma_A 55 KGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFTKAIG 134 (184)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCchHHHHHcC
Confidence 355 5666677999999999 79999999999976 677 88888753 235778888
Q ss_pred Cc-----------cccEEEEEeCCeEEEEeeCC
Q 021976 125 IL-----------AYPTLYLFVAGVRQFQFFGE 146 (304)
Q Consensus 125 v~-----------~~Pt~~~~~~g~~~~~~~g~ 146 (304)
+. ..|+.+++++|++...+.|+
T Consensus 135 v~~~~~~~g~g~~~~r~tfiIddG~I~~~~~~~ 167 (184)
T 3uma_A 135 MEIDLSAGTLGIRSKRYSMLVEDGVVKALNIEE 167 (184)
T ss_dssp CEEEEGGGTCEEEECCEEEEEETTEEEEEEECS
T ss_pred CceeccccCCcccceeEEEEECCCEEEEEEEeC
Confidence 75 24767777999888777653
No 235
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.92 E-value=1.1e-09 Score=78.73 Aligned_cols=72 Identities=14% Similarity=0.094 Sum_probs=52.4
Q ss_pred hcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCccc-------HHHHHhCCCccccEEEEEeC
Q 021976 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE-------KDLAKEYNILAYPTLYLFVA 136 (304)
Q Consensus 64 ~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~-------~~~~~~~~v~~~Pt~~~~~~ 136 (304)
+.+++.+..++ ++.|+++||++|++..+.++++...++ . +..+|++.+ ..+.+.+|+.++|++ |.+
T Consensus 3 ~~~~~~i~~~~--v~~f~~~~C~~C~~~~~~L~~~~~~~~-~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i--~~~ 75 (105)
T 1kte_A 3 AFVNSKIQPGK--VVVFIKPTCPFCRKTQELLSQLPFKEG-L--LEFVDITATSDTNEIQDYLQQLTGARTVPRV--FIG 75 (105)
T ss_dssp HHHHHHCCTTC--EEEEECSSCHHHHHHHHHHHHSCBCTT-S--EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE--EET
T ss_pred hHHHhhcccCC--EEEEEcCCCHhHHHHHHHHHHcCCCCC-c--cEEEEccCCCCHHHHHHHHHHHhCCCCcCeE--EEC
Confidence 34566665543 667999999999999999988765544 2 556677665 357888999999997 448
Q ss_pred CeEEEE
Q 021976 137 GVRQFQ 142 (304)
Q Consensus 137 g~~~~~ 142 (304)
|+.+..
T Consensus 76 g~~i~g 81 (105)
T 1kte_A 76 KECIGG 81 (105)
T ss_dssp TEEEES
T ss_pred CEEEec
Confidence 865443
No 236
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.91 E-value=1.4e-09 Score=74.11 Aligned_cols=70 Identities=11% Similarity=0.179 Sum_probs=53.0
Q ss_pred EEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHH---hCCCccccEEEEEeCCeEEEEeeCCCCHHHHH
Q 021976 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAK---EYNILAYPTLYLFVAGVRQFQFFGERTRDVIS 153 (304)
Q Consensus 77 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~---~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~ 153 (304)
++.|+++||++|++..+.+++. ++.+..+|+++++++.+ ++|+.++|++ +.+|+. .|..+.+.|.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~--~~~g~~----~~g~~~~~l~ 70 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR------GFDFEMINVDRVPEAAEALRAQGFRQLPVV--IAGDLS----WSGFRPDMIN 70 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCCSSCEE--EETTEE----EESCCHHHHG
T ss_pred EEEEcCCCChhHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHhCCCccCEE--EECCEE----EecCCHHHHH
Confidence 6789999999999999988763 47788899998766544 5899999998 347743 2345677776
Q ss_pred HHHHH
Q 021976 154 AWVRE 158 (304)
Q Consensus 154 ~~i~~ 158 (304)
+++.+
T Consensus 71 ~~l~~ 75 (81)
T 1h75_A 71 RLHPA 75 (81)
T ss_dssp GGSCC
T ss_pred HHHhc
Confidence 66644
No 237
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.91 E-value=4.6e-09 Score=82.41 Aligned_cols=86 Identities=15% Similarity=0.186 Sum_probs=66.5
Q ss_pred CCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcc-----------------------cHHHHHhCCCcc
Q 021976 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL-----------------------EKDLAKEYNILA 127 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~-----------------------~~~~~~~~~v~~ 127 (304)
.+++++|+|| ++||++|+.+.|.+.++.+++ .++.++.|+.+. +..+ +.||+..
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~~ 123 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDM-EKYGVLI 123 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGG-GGGTCBB
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcH-HHhCCEe
Confidence 5789999999 899999999999999999888 678888887642 2345 6666642
Q ss_pred ---------ccEEEEEe-CCeEEEEeeC-----CCCHHHHHHHHHHH
Q 021976 128 ---------YPTLYLFV-AGVRQFQFFG-----ERTRDVISAWVREK 159 (304)
Q Consensus 128 ---------~Pt~~~~~-~g~~~~~~~g-----~~~~~~l~~~i~~~ 159 (304)
.|++++++ +|+....+.| ..+.+++.+.|++.
T Consensus 124 ~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 124 GEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp CSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred cccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 59999998 8988888864 34567787777653
No 238
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.91 E-value=1.1e-08 Score=84.41 Aligned_cols=97 Identities=10% Similarity=0.205 Sum_probs=81.2
Q ss_pred CceecCCHHHHHHhhccCCeEEEEEec--CCCCccHHHHHHHh-ccC--CceeEEEec--------CHHHHhhcCCC--C
Q 021976 163 GTYSITTTDEAERILTVESKLVLGFLH--DLEGMESEELAAAS-KLH--SDVNFYQTT--------SADVAEFFHIH--P 227 (304)
Q Consensus 163 ~~~~l~~~~~~~~~~~~~~~~~v~f~~--~~~~~~~~~~~~~a-~~~--~~~~f~~~~--------~~~l~~~~~i~--~ 227 (304)
.+..+ +.++++..++.+..++|.||. +||+ ..+.|..++ .+. .++.|+.+. +++++++|+|+ +
T Consensus 6 ~v~~L-t~~nF~~~i~~~~~vlV~FyA~~pWCg-l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~ 83 (240)
T 2qc7_A 6 GALPL-DTVTFYKVIPKSKFVLVKFDTQYPYGE-KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKES 83 (240)
T ss_dssp TCEEC-CTTHHHHHGGGCSEEEEEECCSSCCSH-HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGGG
T ss_pred CceEC-CHHHHHHHHcCCCCEEEEEeCCCCCCc-chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCCC
Confidence 45666 446788888888899999999 9999 777788877 343 568888776 78999999999 8
Q ss_pred CCCCCeEEEEecCC-CceecccCCCCHHHHHHHHhcCC
Q 021976 228 KSKRPALIFLHLEA-GKATPFRHQFTRLAIANFVTHTK 264 (304)
Q Consensus 228 ~~~~P~lv~~~~~~-~~~~~y~g~~~~~~i~~fi~~~~ 264 (304)
+|++++|+.+. ..+..|.|.++.+.|.+||.++.
T Consensus 84 ---~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 84 ---YPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp ---CSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred ---CCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 99999999876 35789999999999999999885
No 239
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.90 E-value=8.5e-09 Score=68.93 Aligned_cols=68 Identities=12% Similarity=0.174 Sum_probs=53.8
Q ss_pred EEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHH---hCCCccccEEEEEeCCeEEEEeeCCCCHHHHH
Q 021976 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAK---EYNILAYPTLYLFVAGVRQFQFFGERTRDVIS 153 (304)
Q Consensus 77 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~---~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~ 153 (304)
++.|+++||++|++..+.+++. ++.+..+|+++++++.+ ++|+.++|++++ +|+. . |..+.+.+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~~---~-~g~~~~~l~ 70 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA------GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGEH---W-SGFRPERIK 70 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTEE---E-ESCCHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCeE---E-cCCCHHHHH
Confidence 5779999999999999988764 47788899988876655 899999999874 7743 3 345778888
Q ss_pred HHH
Q 021976 154 AWV 156 (304)
Q Consensus 154 ~~i 156 (304)
+++
T Consensus 71 ~~l 73 (75)
T 1r7h_A 71 QLQ 73 (75)
T ss_dssp HHH
T ss_pred HHH
Confidence 776
No 240
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.90 E-value=6.8e-09 Score=86.17 Aligned_cols=85 Identities=13% Similarity=0.217 Sum_probs=65.3
Q ss_pred CCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeC---------------------------------------
Q 021976 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA--------------------------------------- 113 (304)
Q Consensus 73 ~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~--------------------------------------- 113 (304)
.+.+++.|+.+||++|+++.+.+.++.+. +++.+..++.
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~~ 174 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVP 174 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCCC
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCcc
Confidence 46789999999999999999999887764 3565554432
Q ss_pred -----------cccHHHHHhCCCccccEEEEEe-CCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 114 -----------YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 114 -----------~~~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+++.++++++||+++||+++.+ +|+ .....|..+.++|.++|.+..
T Consensus 175 ~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~-~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 175 ANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENT-LQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTE-EEEEESSCCHHHHHHHTTC--
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCC-EEEecCCCCHHHHHHHHHHHH
Confidence 1234567889999999999987 574 467889999999999887554
No 241
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.89 E-value=1.8e-08 Score=74.88 Aligned_cols=99 Identities=12% Similarity=0.081 Sum_probs=75.1
Q ss_pred CCCceecCCHHHHHHhh-ccCCeEEEEEecCCCCccH---HHHHHHhc------cCCceeEEEe---cCHHHHhhcCCCC
Q 021976 161 TLGTYSITTTDEAERIL-TVESKLVLGFLHDLEGMES---EELAAASK------LHSDVNFYQT---TSADVAEFFHIHP 227 (304)
Q Consensus 161 ~~~~~~l~~~~~~~~~~-~~~~~~~v~f~~~~~~~~~---~~~~~~a~------~~~~~~f~~~---~~~~l~~~~~i~~ 227 (304)
...+..++ .+++++.+ ++++.++|.|+.+||+++. ..+.+++. ...++.|+.+ .+++++++|++.+
T Consensus 14 ~~~v~~l~-~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~ 92 (127)
T 3h79_A 14 PSRVVELT-DETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSG 92 (127)
T ss_dssp CCCCEECC-TTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCS
T ss_pred CCceEECC-hhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCcc
Confidence 34567774 45677666 4588999999999998743 33444431 2356777754 6889999999997
Q ss_pred CCCCCeEEEEecCCCc-eecccCCCCHHHHHHHHhcC
Q 021976 228 KSKRPALIFLHLEAGK-ATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 228 ~~~~P~lv~~~~~~~~-~~~y~g~~~~~~i~~fi~~~ 263 (304)
+|++++|++++.. +..|.|..+.++|.+||.++
T Consensus 93 ---~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 93 ---FPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp ---SSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred ---CCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 9999999987643 47899999999999999875
No 242
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.89 E-value=6.3e-09 Score=81.21 Aligned_cols=85 Identities=9% Similarity=0.100 Sum_probs=65.3
Q ss_pred CCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcc-----------------------cHHHHHhCCCcc
Q 021976 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL-----------------------EKDLAKEYNILA 127 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~-----------------------~~~~~~~~~v~~ 127 (304)
++++++|+|| ++||++|....|.+.+++++ .++.++.|+.+. +.++++.||+..
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~ 122 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVM 122 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCEE
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhCCcc
Confidence 5789999999 78999999999999999887 467888887642 345677788875
Q ss_pred ------ccEEEEEe-CCeEEEEeeC-----CCCHHHHHHHHHH
Q 021976 128 ------YPTLYLFV-AGVRQFQFFG-----ERTRDVISAWVRE 158 (304)
Q Consensus 128 ------~Pt~~~~~-~g~~~~~~~g-----~~~~~~l~~~i~~ 158 (304)
.|++++++ +|+++..+.+ ..+.+++.+.+++
T Consensus 123 ~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 123 EELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp TTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred ccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 89999997 8987776543 3455677776653
No 243
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.88 E-value=4.3e-08 Score=83.93 Aligned_cols=118 Identities=10% Similarity=0.137 Sum_probs=92.3
Q ss_pred CCceecCCHHHHHHhh-ccCCeEEEEEecCCCCccH---HHHHHHh-ccCCceeEEEe-----cCHHHHhhcCCCCCCCC
Q 021976 162 LGTYSITTTDEAERIL-TVESKLVLGFLHDLEGMES---EELAAAS-KLHSDVNFYQT-----TSADVAEFFHIHPKSKR 231 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~-~~~~~~~v~f~~~~~~~~~---~~~~~~a-~~~~~~~f~~~-----~~~~l~~~~~i~~~~~~ 231 (304)
..+.++ +.+++++.+ +.+.+++|.|+++||+++. ..+.+++ .+.+.+.++.+ .+++++++|+|.+ +
T Consensus 17 ~~vv~l-t~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~---~ 92 (298)
T 3ed3_A 17 PHISEL-TPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNG---F 92 (298)
T ss_dssp TTCEEC-CHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCB---S
T ss_pred CCeEEe-CHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCc---c
Confidence 456666 667888888 4567899999999999853 4455555 45555666654 4689999999997 9
Q ss_pred CeEEEEecCC----------------CceecccCCCCHHHHHHHHhcCCCCcEEeeCc-cchhhhhcCC
Q 021976 232 PALIFLHLEA----------------GKATPFRHQFTRLAIANFVTHTKHPLVVTLTI-HNAQFVFQDP 283 (304)
Q Consensus 232 P~lv~~~~~~----------------~~~~~y~g~~~~~~i~~fi~~~~~p~~~~l~~-~~~~~~~~~~ 283 (304)
|++++|++++ .....|.|.++.+.|.+|+.+...|.+.+++. +.+..+....
T Consensus 93 Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~ 161 (298)
T 3ed3_A 93 PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKS 161 (298)
T ss_dssp SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSC
T ss_pred ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcC
Confidence 9999999874 14689999999999999999999999999965 5677776653
No 244
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.87 E-value=1e-08 Score=80.17 Aligned_cols=75 Identities=11% Similarity=0.056 Sum_probs=58.5
Q ss_pred CCCcEEEEEE-cCCChhhhh-hHHHHHHHHHHhhC-Cc-EEEEEeCcc-----------------------cHHHHHhCC
Q 021976 72 KNRNVMVMFY-ANWCYWSKK-LAPEFAAAAKMLKG-EA-DLVMVDAYL-----------------------EKDLAKEYN 124 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~-~~~~~~~~~~~~~~-~~-~~~~vd~~~-----------------------~~~~~~~~~ 124 (304)
++++++|.|| ++||++|+. +.|.+.++++++++ ++ .++.|+.+. +.+++++||
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~~g 109 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHGADDKVQMLADPGGAFTKAVD 109 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTSHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCcceEEEECCCCcHHHHcC
Confidence 5677888876 999999999 99999999999865 78 888888643 235677788
Q ss_pred Cccc-----------cEEEEEeCCeEEEEeeCC
Q 021976 125 ILAY-----------PTLYLFVAGVRQFQFFGE 146 (304)
Q Consensus 125 v~~~-----------Pt~~~~~~g~~~~~~~g~ 146 (304)
+... |+.+++++|++...+.++
T Consensus 110 v~~~~~~~~g~~~~~p~t~lI~~G~I~~~~~~~ 142 (167)
T 2wfc_A 110 MELDLSAVLGNVRSKRYSLVIEDGVVTKVNVEP 142 (167)
T ss_dssp CEECCHHHHSSCEECCEEEEEETTEEEEEEECT
T ss_pred CccccccccCcccceEEEEEEeCCEEEEEEecC
Confidence 7653 876666999877776654
No 245
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.86 E-value=7.7e-09 Score=80.61 Aligned_cols=73 Identities=8% Similarity=0.036 Sum_probs=60.0
Q ss_pred CCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcc-----------------------cHHHHHhCCCcc
Q 021976 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL-----------------------EKDLAKEYNILA 127 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~-----------------------~~~~~~~~~v~~ 127 (304)
.+++++|+|| ++||++|....|.+.++++++ .++.++.|+.+. +..+++.||+..
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~ 120 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALHSQLGVDI 120 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHHHHHTTCEE
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchHHHHhCcee
Confidence 5789999999 899999999999999999998 577787777531 346778888864
Q ss_pred ---------ccEEEEEe-CCeEEEEeeC
Q 021976 128 ---------YPTLYLFV-AGVRQFQFFG 145 (304)
Q Consensus 128 ---------~Pt~~~~~-~g~~~~~~~g 145 (304)
.|++++++ +|+.+..+.|
T Consensus 121 ~~~~~~g~~~p~~~liD~~G~i~~~~~~ 148 (165)
T 1q98_A 121 QTGPLAGLTSRAVIVLDEQNNVLHSQLV 148 (165)
T ss_dssp CSSTTTTSBCCEEEEECTTSBEEEEEEC
T ss_pred cccccCCccceeEEEEcCCCEEEEEEeC
Confidence 49999997 8988888865
No 246
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.86 E-value=8.7e-09 Score=82.62 Aligned_cols=43 Identities=19% Similarity=0.183 Sum_probs=38.7
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCc
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY 114 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~ 114 (304)
++++++|.||++||++|+.+.|.++++.+++++++.+..++..
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 4788999999999999999999999999999877888888764
No 247
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=98.86 E-value=7.7e-09 Score=81.19 Aligned_cols=76 Identities=12% Similarity=0.086 Sum_probs=55.3
Q ss_pred cCCCcEEEEEEcCCChhhhhh-HHHHHHHHHHhhC-CcE-EEEEeCcc-----------------------cHHHHHhCC
Q 021976 71 GKNRNVMVMFYANWCYWSKKL-APEFAAAAKMLKG-EAD-LVMVDAYL-----------------------EKDLAKEYN 124 (304)
Q Consensus 71 ~~~~~~lv~f~a~wC~~C~~~-~~~~~~~~~~~~~-~~~-~~~vd~~~-----------------------~~~~~~~~~ 124 (304)
.+++++|++||++||++|+.+ .|.+.++++++++ ++. ++.|+.+. +.++++.||
T Consensus 42 ~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 121 (171)
T 2pwj_A 42 KDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLE 121 (171)
T ss_dssp TTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHT
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhCCCCceEEEECCccHHHHHhC
Confidence 334578889999999999999 9999999999875 677 88887653 224566667
Q ss_pred Ccc-----------ccEEEEEeCCeEEEEeeCC
Q 021976 125 ILA-----------YPTLYLFVAGVRQFQFFGE 146 (304)
Q Consensus 125 v~~-----------~Pt~~~~~~g~~~~~~~g~ 146 (304)
+.. .|+.+++.+|++...+.|.
T Consensus 122 v~~~~~~~~~g~~~~~~t~~I~~G~I~~~~~~~ 154 (171)
T 2pwj_A 122 LTTDLSAGLLGIRSERWSAYVVDGKVKALNVEE 154 (171)
T ss_dssp CEEECTTTTCCEEECCEEEEEETTEEEEEEECS
T ss_pred CccccccccCCcccceeEEEEECCEEEEEEeec
Confidence 642 3444444588777777664
No 248
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.83 E-value=8.5e-09 Score=86.12 Aligned_cols=88 Identities=13% Similarity=0.295 Sum_probs=69.9
Q ss_pred CCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc----------------------------cHHHHH
Q 021976 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~ 121 (304)
.+++++|+|| ++||++|..+.|.+.++++++++ ++.++.|+++. +.++++
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 5789999999 99999999999999999999986 78888888753 235677
Q ss_pred hCCCc------cccEEEEEe-CCeEEEEeeC----CCCHHHHHHHHHHH
Q 021976 122 EYNIL------AYPTLYLFV-AGVRQFQFFG----ERTRDVISAWVREK 159 (304)
Q Consensus 122 ~~~v~------~~Pt~~~~~-~g~~~~~~~g----~~~~~~l~~~i~~~ 159 (304)
.||+. .+|++++++ +|++...+.+ ..+.+++.+.|+..
T Consensus 170 ~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 170 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 218 (254)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHhh
Confidence 78885 579999997 8887777665 35567777766543
No 249
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.81 E-value=4.6e-08 Score=76.63 Aligned_cols=89 Identities=15% Similarity=0.206 Sum_probs=64.9
Q ss_pred CCCcEEEEEEcCCCh-hhhhhHHHHHHHHHHhhC---CcEEEEEeCccc---H----HHHHhCC----------------
Q 021976 72 KNRNVMVMFYANWCY-WSKKLAPEFAAAAKMLKG---EADLVMVDAYLE---K----DLAKEYN---------------- 124 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~-~C~~~~~~~~~~~~~~~~---~~~~~~vd~~~~---~----~~~~~~~---------------- 124 (304)
++|+++|+||++||+ +|....+.+.++.+.++. ++.++.|.++.. + +.+++|+
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~~~~~~~~~~~ltg~~~~~ 110 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQKFTEDTSNWNLLTGYSLED 110 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTTCSCCTTEEEEBCSCHHH
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHHHcCCCCCCceecCcccHHH
Confidence 689999999999996 799999999999888754 688888877521 1 2233332
Q ss_pred --------------------CccccEEEEEe-CCeEEEEeeCC--CCHHHHHHHHHHHh
Q 021976 125 --------------------ILAYPTLYLFV-AGVRQFQFFGE--RTRDVISAWVREKM 160 (304)
Q Consensus 125 --------------------v~~~Pt~~~~~-~g~~~~~~~g~--~~~~~l~~~i~~~~ 160 (304)
+...|++++++ +|+.+..|.|. ...+++.+-|++.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 111 ITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYEDIIRDMKRLA 169 (170)
T ss_dssp HHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHHHHHHHHHHh
Confidence 12236788887 89888889874 45677888777654
No 250
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.81 E-value=2.2e-08 Score=80.63 Aligned_cols=73 Identities=8% Similarity=0.082 Sum_probs=59.6
Q ss_pred CCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcc-----------------------cHHHHHhCCCc-
Q 021976 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL-----------------------EKDLAKEYNIL- 126 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~-----------------------~~~~~~~~~v~- 126 (304)
++++++|+|| ++||++|..+.|.+.++++++ .++.++.|+++. +.++++.||+.
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~ygv~~ 155 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-ENTVVLCISSDLPFAQSRFCGAEGLSNVITLSTLRGADFKQAYGVAI 155 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-TTEEEEEEESSCHHHHTTCTTTTTCTTEEEEETTSCTHHHHHTTCEE
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-CCCEEEEEECCCHHHHHHHHHHcCCCCceEEecCchHHHHHHhCcee
Confidence 5789999999 689999999999999999999 578888887642 34667788876
Q ss_pred --------cccEEEEEe-CCeEEEEeeC
Q 021976 127 --------AYPTLYLFV-AGVRQFQFFG 145 (304)
Q Consensus 127 --------~~Pt~~~~~-~g~~~~~~~g 145 (304)
..|++++++ +|+++..+.+
T Consensus 156 ~~~~~~g~~~p~~~lID~~G~I~~~~~~ 183 (200)
T 3zrd_A 156 TEGPLAGLTARAVVVLDGQDNVIYSELV 183 (200)
T ss_dssp CSSTTTTSBCCEEEEECTTSBEEEEEEC
T ss_pred ecccCCCccccEEEEECCCCeEEEEEec
Confidence 269999997 8987777654
No 251
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.80 E-value=2.7e-08 Score=82.43 Aligned_cols=97 Identities=12% Similarity=0.163 Sum_probs=77.9
Q ss_pred CCceecCCHHHHHHhhccCCeEEEEEe--cCCCCccHHHHHHHh-cc---CCceeEEEe---c-----CHHHHhhcCCC-
Q 021976 162 LGTYSITTTDEAERILTVESKLVLGFL--HDLEGMESEELAAAS-KL---HSDVNFYQT---T-----SADVAEFFHIH- 226 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~~~~~~~v~f~--~~~~~~~~~~~~~~a-~~---~~~~~f~~~---~-----~~~l~~~~~i~- 226 (304)
..+..+ +.++++..++++..++|.|| .+||+ ....|..+| .+ ..++.|+.+ . +++++++|+|+
T Consensus 16 ~~v~~L-t~~nF~~vi~~~~~vlV~Fy~~ApWCg-l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~~ 93 (248)
T 2c0g_A 16 TGCVDL-DELSFEKTVERFPYSVVKFDIASPYGE-KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDD 93 (248)
T ss_dssp TTCEEC-CTTTHHHHHTTSSEEEEEEEESSCCSH-HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCT
T ss_pred CCcEEC-CHHHHHHHHhcCCCEEEEEECCCCCCc-cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCCc
Confidence 446666 44667778888889999999 99998 777777777 34 456777754 4 78999999999
Q ss_pred -CCCCCCeEEEEecCC-Cceecc--cCCCCHHHHHHHHhcCC
Q 021976 227 -PKSKRPALIFLHLEA-GKATPF--RHQFTRLAIANFVTHTK 264 (304)
Q Consensus 227 -~~~~~P~lv~~~~~~-~~~~~y--~g~~~~~~i~~fi~~~~ 264 (304)
+ +|++++|+ +. ..+..| .|.++.+.|.+||.++.
T Consensus 94 ~~---~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 94 KN---FPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp TS---CCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHS
T ss_pred CC---CCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhh
Confidence 8 99999999 65 347888 89999999999999864
No 252
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.77 E-value=2.4e-08 Score=78.42 Aligned_cols=85 Identities=15% Similarity=0.138 Sum_probs=60.4
Q ss_pred CCCc-EEEEEEcCCChhhh-hhHHHHHHHHHHhhC-CcEEEE-EeCcc-----------------------cHHHHHhCC
Q 021976 72 KNRN-VMVMFYANWCYWSK-KLAPEFAAAAKMLKG-EADLVM-VDAYL-----------------------EKDLAKEYN 124 (304)
Q Consensus 72 ~~~~-~lv~f~a~wC~~C~-~~~~~~~~~~~~~~~-~~~~~~-vd~~~-----------------------~~~~~~~~~ 124 (304)
++++ +|+.||++||++|. .+.|.+.++++++++ ++.++. |..+. +.+++++||
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yG 121 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETD 121 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCEEEECTTCHHHHHHT
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceEEEECCChHHHHHhC
Confidence 4554 45566699999999 599999999999976 676664 66542 235788888
Q ss_pred Cc-------------cccEEEEEeCCeEEEEeeCC----CCHHHHHHHH
Q 021976 125 IL-------------AYPTLYLFVAGVRQFQFFGE----RTRDVISAWV 156 (304)
Q Consensus 125 v~-------------~~Pt~~~~~~g~~~~~~~g~----~~~~~l~~~i 156 (304)
+. ..|+.+++++|++...+.++ ++..+....|
T Consensus 122 v~~~~~~~~~~g~~~~~r~tfvIDdG~I~~~~v~~~~~g~~~~~~~~vl 170 (173)
T 3mng_A 122 LLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNII 170 (173)
T ss_dssp CBCCSTTHHHHSSCCBCCEEEEEETTEEEEEEECTTSSCSSTTSHHHHH
T ss_pred CCcccccccccCCcceEEEEEEEECCEEEEEEEeCCCCCcchHHHHHHH
Confidence 75 34988888899877777653 3444444444
No 253
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.75 E-value=7.8e-08 Score=71.98 Aligned_cols=102 Identities=10% Similarity=0.029 Sum_probs=79.3
Q ss_pred HHhCCCceecCCHHHHHHhhccCCeEEEEEecCC--CCc---cHHHHHHHh-ccCCc-eeEEEe---cCHHHHhhcCCCC
Q 021976 158 EKMTLGTYSITTTDEAERILTVESKLVLGFLHDL--EGM---ESEELAAAS-KLHSD-VNFYQT---TSADVAEFFHIHP 227 (304)
Q Consensus 158 ~~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~--~~~---~~~~~~~~a-~~~~~-~~f~~~---~~~~l~~~~~i~~ 227 (304)
+........+ +.+++++.+.+..+++|.|+.+| |++ ....+.+++ ++.++ ++|+.+ .+++++.+|+|.+
T Consensus 13 rl~~~g~~~~-t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~s 91 (140)
T 2qgv_A 13 RMLARGWTPV-SESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFR 91 (140)
T ss_dssp HHHHTTCEEC-CHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCS
T ss_pred HHHhcCCccC-CHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCcc
Confidence 3333355666 56788888777778888888888 655 566677777 57778 899876 6889999999997
Q ss_pred CCCCCeEEEEecCCCceecccCCCCHHHHHHHHhcCC
Q 021976 228 KSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (304)
Q Consensus 228 ~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 264 (304)
.||+++|+++. ......|..+.+.|.+||.+..
T Consensus 92 ---IPTlilFk~G~-~v~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 92 ---FPATLVFTGGN-YRGVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp ---SSEEEEEETTE-EEEEEESCCCHHHHHHHHHHHH
T ss_pred ---CCEEEEEECCE-EEEEEecCCCHHHHHHHHHHHh
Confidence 99999999885 5567788889999999998643
No 254
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.74 E-value=1.5e-08 Score=72.49 Aligned_cols=95 Identities=7% Similarity=0.052 Sum_probs=60.9
Q ss_pred eecCCHHHHHHhhccCCeEEEEEecCCCCccH---HHHHHHhccCCceeEEE---ecCHHHHhhcCCCCCCCCCeEEEEe
Q 021976 165 YSITTTDEAERILTVESKLVLGFLHDLEGMES---EELAAASKLHSDVNFYQ---TTSADVAEFFHIHPKSKRPALIFLH 238 (304)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~---~~~~~~a~~~~~~~f~~---~~~~~l~~~~~i~~~~~~P~lv~~~ 238 (304)
..+++.+++++.++++++++|.|+++||+++. ..+.+++....++.|.. ..+++++++|++.+ .|++++|+
T Consensus 3 ~~i~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~---~Pt~~~~~ 79 (105)
T 4euy_A 3 NTFKTIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYNYVEKIEILLQDMQEIAGRYAVFT---GPTVLLFY 79 (105)
T ss_dssp -------CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCTTEEEEEEEECCC---------CC---CCEEEEEE
T ss_pred cccCCHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcCCceEEEEECCCCHHHHHhcCCCC---CCEEEEEe
Confidence 45666777777887888999999999998854 34555553335677664 46889999999997 99999998
Q ss_pred cCCCceecccCCCCHHHHHHHHhcC
Q 021976 239 LEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 239 ~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
++ .....+.|..+.++|.+||.+.
T Consensus 80 ~G-~~~~~~~g~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 80 NG-KEILRESRFISLENLERTIQLF 103 (105)
T ss_dssp TT-EEEEEEESSCCHHHHHHHHHTT
T ss_pred CC-eEEEEEeCCcCHHHHHHHHHHh
Confidence 55 3556778999999999999865
No 255
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.73 E-value=2.3e-09 Score=78.32 Aligned_cols=73 Identities=10% Similarity=0.070 Sum_probs=51.3
Q ss_pred hcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccH-------HHHHhCCCccccEEEEEeC
Q 021976 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEK-------DLAKEYNILAYPTLYLFVA 136 (304)
Q Consensus 64 ~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-------~~~~~~~v~~~Pt~~~~~~ 136 (304)
+.+++.+.. ..++.|+++||++|++..+.++++...++ . +..+|+++++ .+.+.+|+.++|++++ +
T Consensus 10 ~~~~~~i~~--~~vv~f~~~~Cp~C~~~~~~L~~~~~~~~-~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i--~ 82 (114)
T 2hze_A 10 EFVQQRLAN--NKVTIFVKYTCPFCRNALDILNKFSFKRG-A--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF--G 82 (114)
T ss_dssp HHHHTTCCT--TCEEEEECTTCHHHHHHHHHHTTSCBCTT-S--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE--T
T ss_pred HHHHHHhcc--CCEEEEEeCCChhHHHHHHHHHHcCCCcC-c--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE--C
Confidence 334444433 35777999999999999998876432221 1 7888888764 6888999999998744 8
Q ss_pred CeEEEEe
Q 021976 137 GVRQFQF 143 (304)
Q Consensus 137 g~~~~~~ 143 (304)
|+.+..+
T Consensus 83 g~~igg~ 89 (114)
T 2hze_A 83 KTSIGGY 89 (114)
T ss_dssp TEEEESH
T ss_pred CEEEeCc
Confidence 8655433
No 256
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.72 E-value=1.3e-08 Score=76.13 Aligned_cols=87 Identities=17% Similarity=0.154 Sum_probs=58.9
Q ss_pred hhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCccc---H----HHHHhCCCccccEEEEEe
Q 021976 63 GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE---K----DLAKEYNILAYPTLYLFV 135 (304)
Q Consensus 63 ~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~---~----~~~~~~~v~~~Pt~~~~~ 135 (304)
.+.+++.+..++ + +.|+++||++|++..+.++++. +.+..+|++.+ + .+.+.+|+.++|+++ .
T Consensus 17 ~~~~~~~i~~~~-v-vvf~~~~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~--i 86 (130)
T 2cq9_A 17 VNQIQETISDNC-V-VIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--V 86 (130)
T ss_dssp HHHHHHHHHHSS-E-EEEECSSCSHHHHHHHHHHHHT------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE--E
T ss_pred HHHHHHHHcCCc-E-EEEEcCCChHHHHHHHHHHHcC------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE--E
Confidence 455666665554 3 3399999999999999988753 44566777654 3 377889999999984 4
Q ss_pred CCeEEEEee---CCCCHHHHHHHHHHH
Q 021976 136 AGVRQFQFF---GERTRDVISAWVREK 159 (304)
Q Consensus 136 ~g~~~~~~~---g~~~~~~l~~~i~~~ 159 (304)
+|+.+..+. +......|.++|...
T Consensus 87 ~G~~igg~~~l~~~~~~~~L~~~L~~~ 113 (130)
T 2cq9_A 87 NGTFIGGATDTHRLHKEGKLLPLVHQC 113 (130)
T ss_dssp TTEEEEEHHHHHHHHHHTSSHHHHHHH
T ss_pred CCEEEcChHHHHHHHHcCcHHHHHHHc
Confidence 886655432 223344566666554
No 257
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.71 E-value=1.6e-07 Score=69.72 Aligned_cols=97 Identities=13% Similarity=0.177 Sum_probs=74.7
Q ss_pred CceecCCHHHHHH-hhccCCeEEEEEecCCCCcc---HHHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeE
Q 021976 163 GTYSITTTDEAER-ILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (304)
Q Consensus 163 ~~~~l~~~~~~~~-~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~l 234 (304)
.+..++. ++++. ..+++++++|.|+.+||.++ ...+.+++ .+.+++.|..+ .+++++++|++.. +|++
T Consensus 18 ~v~~l~~-~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~---~Pt~ 93 (130)
T 2dml_A 18 DVIELTP-SNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQG---FPTI 93 (130)
T ss_dssp SSEECCT-TTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCS---SSEE
T ss_pred CcEECCH-HHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCc---cCEE
Confidence 4666644 55665 55667889999999999874 44555655 45555777654 5788999999997 9999
Q ss_pred EEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 235 IFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 235 v~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
++|++++.....|.|..+.++|.+|+.+.
T Consensus 94 ~~~~~~~~~~~~~~G~~~~~~l~~~l~~~ 122 (130)
T 2dml_A 94 KIFGANKNKPEDYQGGRTGEAIVDAALSA 122 (130)
T ss_dssp EEESSCTTSCEECCSCCSHHHHHHHHHHH
T ss_pred EEEeCCCCeEEEeecCCCHHHHHHHHHHH
Confidence 99988875578899999999999999864
No 258
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=98.71 E-value=1.9e-07 Score=76.45 Aligned_cols=86 Identities=13% Similarity=0.078 Sum_probs=67.3
Q ss_pred cEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCccc-------------------------------HHHHHh
Q 021976 75 NVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE-------------------------------KDLAKE 122 (304)
Q Consensus 75 ~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-------------------------------~~~~~~ 122 (304)
.+|+.||++||++|..+.+.+.++++++++ ++.++.|+++.. .++++.
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ 113 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAIL 113 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHHH
Confidence 577778999999999999999999999976 788888877531 245677
Q ss_pred CCCc------------cccEEEEEe-CCeEEEEeeCC----CCHHHHHHHHHHHh
Q 021976 123 YNIL------------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (304)
Q Consensus 123 ~~v~------------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (304)
||+. .+|++++++ +|++...+.|+ ++.+++.+.|+...
T Consensus 114 ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 114 LGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp TTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHHH
T ss_pred hCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 8873 379999997 88877777653 56788888876543
No 259
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.70 E-value=1.9e-07 Score=67.17 Aligned_cols=96 Identities=8% Similarity=0.156 Sum_probs=74.5
Q ss_pred CceecCCHHHHHHhh-ccCCeEEEEEecCCCCccHH---HHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeE
Q 021976 163 GTYSITTTDEAERIL-TVESKLVLGFLHDLEGMESE---ELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (304)
Q Consensus 163 ~~~~l~~~~~~~~~~-~~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~l 234 (304)
++..+ +.+++++.+ +++++++|.|+.+||+++.. .+..++ .+.+++.|+.+ .+++++++|++.+ .|++
T Consensus 5 ~v~~l-~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~ 80 (111)
T 3gnj_A 5 SLEKL-DTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKG---VPQI 80 (111)
T ss_dssp CSEEC-CHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCS---SCEE
T ss_pred cceec-CHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCc---CCEE
Confidence 45666 677888877 67889999999999987543 455555 35556777754 6788999999997 9999
Q ss_pred EEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 235 IFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 235 v~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
++|+.+. ....+.|..+.+.|.+||.+.
T Consensus 81 ~~~~~g~-~~~~~~g~~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 81 LYFKDGE-YKGKMAGDVEDDEVEQMIADV 108 (111)
T ss_dssp EEEETTE-EEEEEESSCCHHHHHHHHHHH
T ss_pred EEEECCE-EEEEEeccCCHHHHHHHHHHH
Confidence 9997553 556788999999999999863
No 260
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.69 E-value=1e-07 Score=72.35 Aligned_cols=97 Identities=10% Similarity=0.156 Sum_probs=76.0
Q ss_pred ceecCCHHHHHHhhc--cCCeEEEEEecCCCCcc---HHHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeE
Q 021976 164 TYSITTTDEAERILT--VESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (304)
Q Consensus 164 ~~~l~~~~~~~~~~~--~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~l 234 (304)
+..+++.+++++.+. ++.+++|-|+++||+|+ .+.+.++| ++.+++.|+.+ .+++++.+|+|.+ .||+
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~s---iPT~ 99 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYD---PVSV 99 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCS---SEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCC---CCEE
Confidence 678899999987663 57789999999999984 55567776 56667778764 7889999999997 9999
Q ss_pred EEEecCCCce-e-------cccCCCC-HHHHHHHHhcC
Q 021976 235 IFLHLEAGKA-T-------PFRHQFT-RLAIANFVTHT 263 (304)
Q Consensus 235 v~~~~~~~~~-~-------~y~g~~~-~~~i~~fi~~~ 263 (304)
++|+++.... . ...|..+ .+.|.++|+..
T Consensus 100 ~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 100 MFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETI 137 (160)
T ss_dssp EEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHH
T ss_pred EEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHH
Confidence 9999774211 2 5778776 88999998853
No 261
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.69 E-value=1.5e-07 Score=66.98 Aligned_cols=95 Identities=17% Similarity=0.190 Sum_probs=73.5
Q ss_pred ceecCCHHHHHHhhc--cCCeEEEEEecCCCCccH---HHHHHHhccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEE
Q 021976 164 TYSITTTDEAERILT--VESKLVLGFLHDLEGMES---EELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (304)
Q Consensus 164 ~~~l~~~~~~~~~~~--~~~~~~v~f~~~~~~~~~---~~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv 235 (304)
+..+++.+++++.+. +++++++.|+++||+++. ..+..++....++.|..+ .+++++++|++.+ +|+++
T Consensus 2 v~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~---~Pt~~ 78 (105)
T 3m9j_A 2 VKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASESEVKS---MPTFQ 78 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTSEEEEEETTTCHHHHHHTTCCB---SSEEE
T ss_pred eEEcCCHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccCeEEEEEEhhhhHHHHHHcCCCc---CcEEE
Confidence 356788999999987 678899999999998753 334455543344666654 6789999999997 99999
Q ss_pred EEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 236 FLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
+++.++ ....+.|. +.+.|.+||.+.
T Consensus 79 ~~~~g~-~~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 79 FFKKGQ-KVGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp EEETTE-EEEEEESS-CHHHHHHHHHHH
T ss_pred EEECCe-EEEEEeCC-CHHHHHHHHHHh
Confidence 996553 55678888 999999999753
No 262
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.69 E-value=1.3e-08 Score=77.59 Aligned_cols=86 Identities=16% Similarity=0.162 Sum_probs=56.8
Q ss_pred hhcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCccc---H----HHHHhCCCccccEEEEEe
Q 021976 63 GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE---K----DLAKEYNILAYPTLYLFV 135 (304)
Q Consensus 63 ~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~---~----~~~~~~~v~~~Pt~~~~~ 135 (304)
.+.+++.+.+++ ++| |+++||++|++..+.++++. +.+..+|++.+ + .+.+.+|+.++|+++ .
T Consensus 39 ~~~~~~~i~~~~-Vvv-f~~~~Cp~C~~~k~~L~~~~------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if--i 108 (146)
T 2ht9_A 39 VNQIQETISDNC-VVI-FSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--V 108 (146)
T ss_dssp HHHHHHHHHHCS-EEE-EECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE--E
T ss_pred HHHHHHHhcCCC-EEE-EECCCChhHHHHHHHHHHcC------CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE--E
Confidence 355667775553 333 99999999999999988763 34556666654 3 378889999999984 4
Q ss_pred CCeEEEEee---CCCCHHHHHHHHHH
Q 021976 136 AGVRQFQFF---GERTRDVISAWVRE 158 (304)
Q Consensus 136 ~g~~~~~~~---g~~~~~~l~~~i~~ 158 (304)
+|+.+..+. +......|.++|..
T Consensus 109 ~G~~igG~d~l~~l~~~g~L~~~L~~ 134 (146)
T 2ht9_A 109 NGTFIGGATDTHRLHKEGKLLPLVHQ 134 (146)
T ss_dssp TTEEEESHHHHHHHHHTTCHHHHHHH
T ss_pred CCEEEeCchHHHHHHHcChHHHHHHH
Confidence 886544332 12223345555554
No 263
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.69 E-value=8.7e-08 Score=71.47 Aligned_cols=96 Identities=9% Similarity=0.010 Sum_probs=75.1
Q ss_pred ceecCCHHHHHHhhccCC-eEEEEEecCCC--Cc---cHHHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCe
Q 021976 164 TYSITTTDEAERILTVES-KLVLGFLHDLE--GM---ESEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPA 233 (304)
Q Consensus 164 ~~~l~~~~~~~~~~~~~~-~~~v~f~~~~~--~~---~~~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~ 233 (304)
...+++ +++++.+.+.+ +++|.|+.+|| ++ ....+.+++ ++.++++|+.+ .+++++.+|+|.+ .||
T Consensus 17 ~~~vt~-~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~s---iPT 92 (137)
T 2qsi_A 17 PTLVDE-ATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAV---CPS 92 (137)
T ss_dssp CEEECT-TTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCS---SSE
T ss_pred CcccCH-hHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCcc---CCE
Confidence 335544 66777665555 89999999999 66 455677766 57788888875 6789999999997 999
Q ss_pred EEEEecCCCceecccCCCCHHHHHHHHhcCC
Q 021976 234 LIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (304)
Q Consensus 234 lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 264 (304)
+++|+++. ......|..+.+.|.+||.++.
T Consensus 93 lilFkdG~-~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 93 LAVVQPER-TLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEEEECCE-EEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEECCE-EEEEEeCCCCHHHHHHHHHHHh
Confidence 99999875 5667788889999999998643
No 264
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.68 E-value=2.2e-07 Score=67.72 Aligned_cols=97 Identities=16% Similarity=0.183 Sum_probs=74.2
Q ss_pred CCceecCCHHHHHHhhc--cCCeEEEEEecCCCCccHH---HHHHHhccCCceeEEEe---cCHHHHhhcCCCCCCCCCe
Q 021976 162 LGTYSITTTDEAERILT--VESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPA 233 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~--~~~~~~v~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~ 233 (304)
+......+.+++++.+. .+++++|.|+.+||.++.. .+.+++....++.|..+ .+++++++|++.+ +|+
T Consensus 11 ~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~---~Pt 87 (116)
T 3qfa_C 11 GSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKS---MPT 87 (116)
T ss_dssp -CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTTSEEEEEETTTTHHHHHHTTCCS---SSE
T ss_pred CcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCcc---ccE
Confidence 34455668899999988 6889999999999998544 45555543344776654 6789999999997 999
Q ss_pred EEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 234 LIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 234 lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
+++|+.+ .....+.|. +.+.|.+||.+.
T Consensus 88 ~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 88 FQFFKKG-QKVGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp EEEESSS-SEEEEEESC-CHHHHHHHHHHH
T ss_pred EEEEeCC-eEEEEEcCC-CHHHHHHHHHHh
Confidence 9999654 366678888 999999999753
No 265
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.66 E-value=1.9e-07 Score=67.35 Aligned_cols=97 Identities=18% Similarity=0.144 Sum_probs=74.6
Q ss_pred CCceecCCHHHHHHhhcc----CCeEEEEEecCCCCccH---HHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCC
Q 021976 162 LGTYSITTTDEAERILTV----ESKLVLGFLHDLEGMES---EELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSK 230 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~~----~~~~~v~f~~~~~~~~~---~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~ 230 (304)
..+..+++.+++++.+.. +++++|.|+.+||.++. ..+..++ .+.+++.|..+ .+++++++|++.+
T Consensus 2 ~~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~--- 78 (112)
T 1ep7_A 2 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITA--- 78 (112)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCB---
T ss_pred CcEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCc---
Confidence 456778888999888875 78899999999998753 3345555 34446777754 5778999999997
Q ss_pred CCeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 231 RPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 231 ~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
.|++++++.+. ....+.|. +.++|.+||.+.
T Consensus 79 ~Pt~~~~~~G~-~~~~~~G~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 79 MPTFHVYKDGV-KADDLVGA-SQDKLKALVAKH 109 (112)
T ss_dssp SSEEEEEETTE-EEEEEESC-CHHHHHHHHHHH
T ss_pred ccEEEEEECCe-EEEEEcCC-CHHHHHHHHHHH
Confidence 99999997553 45577887 899999999853
No 266
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.66 E-value=1.5e-07 Score=68.04 Aligned_cols=97 Identities=11% Similarity=0.091 Sum_probs=73.1
Q ss_pred ceecCCHHHHHHhhccCCeEEEEEecCCCCcc---HHHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEEE
Q 021976 164 TYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIF 236 (304)
Q Consensus 164 ~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv~ 236 (304)
+..++ .+++++.+ ++++++|.|+++||.++ ...+.+++ .+.+++.|..+ .+++++++|++.+ .|++++
T Consensus 3 v~~l~-~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~~ 77 (112)
T 2voc_A 3 IVKAT-DQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMS---IPTLLV 77 (112)
T ss_dssp CEECC-TTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCS---BSEEEE
T ss_pred eEEec-HHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCc---ccEEEE
Confidence 34553 35677777 77889999999999875 34455555 45556777754 5678999999997 999999
Q ss_pred EecCCCceecccCCCCHHHHHHHHhcCCCC
Q 021976 237 LHLEAGKATPFRHQFTRLAIANFVTHTKHP 266 (304)
Q Consensus 237 ~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p 266 (304)
|+.+ .....+.|..+.++|.+|+.++.-|
T Consensus 78 ~~~G-~~~~~~~G~~~~~~l~~~l~~~~~~ 106 (112)
T 2voc_A 78 LKDG-EVVETSVGFKPKEALQELVNKHLLE 106 (112)
T ss_dssp EETT-EEEEEEESCCCHHHHHHHHHTTSCS
T ss_pred EeCC-EEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 9544 3566788999999999999987654
No 267
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.65 E-value=1.6e-07 Score=72.15 Aligned_cols=118 Identities=18% Similarity=0.179 Sum_probs=78.9
Q ss_pred CCCceecCCHHHHHHhhcc--CCeEEEEEecCCCCccHH---HHHHHhccCCceeEEEe---cCHHHHhhcCCCCCCCCC
Q 021976 161 TLGTYSITTTDEAERILTV--ESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRP 232 (304)
Q Consensus 161 ~~~~~~l~~~~~~~~~~~~--~~~~~v~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P 232 (304)
...+..+++.++++..+++ +++++|.|+.+||.++.. .+..++....++.|..+ .+++++++|++.+ +|
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~P 87 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPEVSEKYEISS---VP 87 (153)
T ss_dssp -CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCS---SS
T ss_pred cCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcCCeEEEEEECCCCHHHHHHcCCCC---CC
Confidence 4567888888999999887 789999999999988544 34455533456777754 5788999999997 99
Q ss_pred eEEEEecCCCceecccCCCCHHHHHHHHhcCCCC-------cEEeeCccchhhhhcCC
Q 021976 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHP-------LVVTLTIHNAQFVFQDP 283 (304)
Q Consensus 233 ~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p-------~~~~l~~~~~~~~~~~~ 283 (304)
++++|+. +.....+.| .+.++|.+||.+..-. .+..++.+++..+....
T Consensus 88 t~~~~~~-G~~~~~~~G-~~~~~l~~~i~~~l~~~~~~~~~~~~~l~~~~f~~~~~~~ 143 (153)
T 2wz9_A 88 TFLFFKN-SQKIDRLDG-AHAPELTKKVQRHASSGSFLPSAKVKVDTDPNSSSVDKLA 143 (153)
T ss_dssp EEEEEET-TEEEEEEES-SCHHHHHHHHHHHSCTTSSCSCCCCCCC------------
T ss_pred EEEEEEC-CEEEEEEeC-CCHHHHHHHHHHHhccccCCCccccccCCCCChhhHHHHH
Confidence 9999994 334456677 4788899999874322 35556666666554433
No 268
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.65 E-value=2.1e-07 Score=66.84 Aligned_cols=96 Identities=13% Similarity=0.171 Sum_probs=72.4
Q ss_pred CCceecCCHHHHHHhhccCCeEEEEEecCCCCccHH---HHHHHhc-cC---CceeEEEe---cCHHHHhhcCCCCCCCC
Q 021976 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGMESE---ELAAASK-LH---SDVNFYQT---TSADVAEFFHIHPKSKR 231 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~---~~~~~a~-~~---~~~~f~~~---~~~~l~~~~~i~~~~~~ 231 (304)
..+..+ +.+++++.+. +++++|.|+.+||.++.. .+..++. +. ..+.+..+ .+++++++|++.+ +
T Consensus 5 ~~v~~l-~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~---~ 79 (111)
T 3uvt_A 5 STVLAL-TENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRG---Y 79 (111)
T ss_dssp CCSEEC-CTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCS---S
T ss_pred CcceEc-ChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCc---c
Confidence 456666 5566777776 678999999999988544 3445553 22 35666644 6778999999997 9
Q ss_pred CeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 232 P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
|++++|+++. ....+.|..+.++|.+||.++
T Consensus 80 Pt~~~~~~g~-~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 80 PTLLLFRGGK-KVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp SEEEEEETTE-EEEEECSCCSHHHHHHHHHHH
T ss_pred cEEEEEeCCc-EEEeccCCcCHHHHHHHHHhc
Confidence 9999997653 567889999999999999875
No 269
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.64 E-value=2.4e-07 Score=67.35 Aligned_cols=96 Identities=17% Similarity=0.176 Sum_probs=74.1
Q ss_pred CCceecCCHHHHHHhhccCCeEEEEEecCCCCcc---HHHHHHHhccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEE
Q 021976 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv 235 (304)
+.+..+++.+++++.++++++++|.|+++||.++ ...+.+++....++.|..+ .+++++++|++.+ .|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~ 88 (114)
T 2oe3_A 12 TSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVTA---MPTFV 88 (114)
T ss_dssp GGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCS---BSEEE
T ss_pred hheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCc---ccEEE
Confidence 3467788999999999989999999999999874 4445555532333666654 5778999999997 99999
Q ss_pred EEecCCCceecccCCCCHHHHHHHHhc
Q 021976 236 FLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
+++.+. ....+.|.. .+.|.+||++
T Consensus 89 ~~~~G~-~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 89 LGKDGQ-LIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEETTE-EEEEEESSC-HHHHHHHHHT
T ss_pred EEeCCe-EEEEEeCCC-HHHHHHHHHh
Confidence 996553 455688877 8999999975
No 270
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.64 E-value=2.7e-07 Score=68.30 Aligned_cols=95 Identities=8% Similarity=0.055 Sum_probs=73.9
Q ss_pred ceecCCHHHHHHhhccCCeEEEEEecCCCCcc---HHHHHHHhccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEEEE
Q 021976 164 TYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFL 237 (304)
Q Consensus 164 ~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv~~ 237 (304)
+..+++.+++++.+..+.+++|.|+++||.++ ...+..++....++.|..+ .+++++++|++.+ +|++++|
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~---~Pt~~i~ 97 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFPTVKFAKVDADNNSEIVSKCRVLQ---LPTFIIA 97 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCS---SSEEEEE
T ss_pred eEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCCc---ccEEEEE
Confidence 67788878899888888899999999999874 4445555533356777754 5788999999997 9999999
Q ss_pred ecCCCceecccCCCCHHHHHHHHhcC
Q 021976 238 HLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 238 ~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
+.+. ....+.| .+.+.|.+||.+.
T Consensus 98 ~~G~-~~~~~~G-~~~~~l~~~l~~~ 121 (125)
T 1r26_A 98 RSGK-MLGHVIG-ANPGMLRQKLRDI 121 (125)
T ss_dssp ETTE-EEEEEES-SCHHHHHHHHHHH
T ss_pred eCCe-EEEEEeC-CCHHHHHHHHHHH
Confidence 6553 4556788 6889999999753
No 271
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.63 E-value=3.3e-07 Score=65.97 Aligned_cols=95 Identities=16% Similarity=0.207 Sum_probs=73.2
Q ss_pred ceecCCHHHHHHhhccCCeEEEEEecCCCCccHH---HHHHHhccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEEEE
Q 021976 164 TYSITTTDEAERILTVESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFL 237 (304)
Q Consensus 164 ~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv~~ 237 (304)
.....+.+++++.+.++++++|.|+.+||+++.. .+..++....++.|..+ .+++++++|++.+ +|++++|
T Consensus 8 ~~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vd~~~~~~l~~~~~v~~---~Pt~~~~ 84 (109)
T 3f3q_A 8 VTQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEVSA---MPTLLLF 84 (109)
T ss_dssp CEECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCS---SSEEEEE
T ss_pred ccCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCCc---cCEEEEE
Confidence 4455688899999998999999999999987544 34455533345666643 6789999999997 9999999
Q ss_pred ecCCCceecccCCCCHHHHHHHHhcC
Q 021976 238 HLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 238 ~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
+.+ +....+.|. +.+.|.++|.+.
T Consensus 85 ~~G-~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 85 KNG-KEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp ETT-EEEEEEESS-CHHHHHHHHHHH
T ss_pred ECC-EEEEEEeCC-CHHHHHHHHHhh
Confidence 844 456677787 779999999763
No 272
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.63 E-value=3.6e-07 Score=65.01 Aligned_cols=95 Identities=19% Similarity=0.314 Sum_probs=72.7
Q ss_pred ceecCCHHHHHHhhc--cCCeEEEEEecCCCCccH---HHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeE
Q 021976 164 TYSITTTDEAERILT--VESKLVLGFLHDLEGMES---EELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (304)
Q Consensus 164 ~~~l~~~~~~~~~~~--~~~~~~v~f~~~~~~~~~---~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~l 234 (304)
+.++++.+++++.+. +++++++.|+++||.++. +.+..++ .+..++.+..+ .+++++++|++.+ .|++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~ 78 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISS---MPTF 78 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCS---SSEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCc---ccEE
Confidence 456778788888887 678899999999998753 3455555 34467777754 5778999999997 9999
Q ss_pred EEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 235 IFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 235 v~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
++++.+. ....+.| .+.+.|.+||++.
T Consensus 79 ~~~~~G~-~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 79 VFLKNGV-KVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp EEEETTE-EEEEEES-CCHHHHHHHHHHT
T ss_pred EEEcCCc-EEEEEcC-CCHHHHHHHHHHh
Confidence 9997553 5567788 6889999999864
No 273
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.63 E-value=2.6e-07 Score=65.90 Aligned_cols=96 Identities=9% Similarity=0.208 Sum_probs=70.6
Q ss_pred CceecCCHHHHH-HhhccCCeEEEEEecCCCCccHH---HHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeE
Q 021976 163 GTYSITTTDEAE-RILTVESKLVLGFLHDLEGMESE---ELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (304)
Q Consensus 163 ~~~~l~~~~~~~-~~~~~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~l 234 (304)
.+..++. ++++ ...++++++++.|+++||.++.. .+..++ .+.+++.|..+ .+++++++|++.+ .|++
T Consensus 3 ~v~~l~~-~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~ 78 (107)
T 2i4a_A 3 HTLAVSD-SSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRS---IPTL 78 (107)
T ss_dssp CEEECCT-TTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCS---SSEE
T ss_pred ceeecch-hhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCc---cCEE
Confidence 4556644 4454 44467789999999999987533 344444 45556777754 5778999999997 9999
Q ss_pred EEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 235 IFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 235 v~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
++|+.+ .....+.|..+.+.|.+||.+.
T Consensus 79 ~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 79 MLVRDG-KVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EEEETT-EEEEEEESCCCHHHHHHHHHHT
T ss_pred EEEeCC-EEEEEecCCCCHHHHHHHHHhc
Confidence 999544 3556788999999999999864
No 274
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=98.62 E-value=1.5e-07 Score=76.86 Aligned_cols=85 Identities=9% Similarity=0.117 Sum_probs=66.3
Q ss_pred cEEEEEEcCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCccc----------------------------HHHHHhCCC
Q 021976 75 NVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE----------------------------KDLAKEYNI 125 (304)
Q Consensus 75 ~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~----------------------------~~~~~~~~v 125 (304)
.+|+.||++||+.|..+.+.+.++++++++ ++.++.|+++.. .++++.||+
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv 113 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKI 113 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTC
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHhCC
Confidence 566667999999999999999999999976 788888887531 246777887
Q ss_pred c------------cccEEEEEe-CCeEEEEeeC----CCCHHHHHHHHHHH
Q 021976 126 L------------AYPTLYLFV-AGVRQFQFFG----ERTRDVISAWVREK 159 (304)
Q Consensus 126 ~------------~~Pt~~~~~-~g~~~~~~~g----~~~~~~l~~~i~~~ 159 (304)
. ..|++++++ +|+....+.| .++.+++.+.|+..
T Consensus 114 ~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~l 164 (220)
T 1xcc_A 114 MDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSL 164 (220)
T ss_dssp EEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 3 369999997 8877776654 35788888887654
No 275
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.62 E-value=2.1e-07 Score=66.56 Aligned_cols=97 Identities=7% Similarity=0.060 Sum_probs=75.0
Q ss_pred CCceecCCHHHHHHhhccCCeEEEEEecCCCCccHH---HHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeE
Q 021976 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGMESE---ELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~l 234 (304)
+.+..+ +.+++++.+.++++++|.|+++||.++.. .+..++ .+.+++.|..+ .+++++++|++.+ .|++
T Consensus 4 ~~v~~l-~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~---~Pt~ 79 (109)
T 3tco_A 4 DVTLVL-TEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLN---IPTT 79 (109)
T ss_dssp CCCEEC-CTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCS---SSEE
T ss_pred CeEEEe-cHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCccc---CCEE
Confidence 345555 55778888888999999999999987543 445555 45556777654 6789999999997 9999
Q ss_pred EEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 235 IFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 235 v~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
++|+++ .....+.|..+.++|.+||.+.
T Consensus 80 ~~~~~g-~~~~~~~g~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 80 LIFVNG-QLVDSLVGAVDEDTLESTVNKY 107 (109)
T ss_dssp EEEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred EEEcCC-cEEEeeeccCCHHHHHHHHHHH
Confidence 999554 3667789999999999999864
No 276
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.62 E-value=3.4e-07 Score=66.19 Aligned_cols=99 Identities=16% Similarity=0.198 Sum_probs=73.0
Q ss_pred hCCCceecCCHHHHHHh-hccCCeEEEEEecCCCCccH---HHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCC
Q 021976 160 MTLGTYSITTTDEAERI-LTVESKLVLGFLHDLEGMES---EELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKR 231 (304)
Q Consensus 160 ~~~~~~~l~~~~~~~~~-~~~~~~~~v~f~~~~~~~~~---~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~ 231 (304)
++..+..++ .++++.. ++.+++++|.|+.+||..+. +.+..++ .+.+++.|..+ .+++++++|++.. .
T Consensus 5 ~~~~v~~l~-~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~---~ 80 (115)
T 1thx_A 5 MSKGVITIT-DAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEG---V 80 (115)
T ss_dssp -CCSEEECC-GGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCS---S
T ss_pred ccCceEEee-ccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCc---e
Confidence 445677774 4566654 46678899999999998754 3344554 45556777754 5778999999997 9
Q ss_pred CeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 232 P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
|++++++.+ .....+.|..+.+++.+||.+.
T Consensus 81 Pt~~~~~~G-~~~~~~~g~~~~~~l~~~l~~~ 111 (115)
T 1thx_A 81 PALRLVKGE-QILDSTEGVISKDKLLSFLDTH 111 (115)
T ss_dssp SEEEEEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred eEEEEEcCC-EEEEEecCCCCHHHHHHHHHHH
Confidence 999999544 3556788999999999999863
No 277
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.61 E-value=4e-07 Score=65.75 Aligned_cols=97 Identities=13% Similarity=0.175 Sum_probs=74.0
Q ss_pred CCceecCCHHHHHHhhccCCeEEEEEecCCCCccHHH---HHHHhccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEE
Q 021976 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEE---LAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~---~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv 235 (304)
+......+.+++++.++++++++|.|+.+||.++... +..++....++.|..+ .+++++++|++.. .|+++
T Consensus 8 ~~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~v~~---~Pt~~ 84 (112)
T 1syr_A 8 HMVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVSEVTEKENITS---MPTFK 84 (112)
T ss_dssp -CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTTHHHHHHTTCCS---SSEEE
T ss_pred eeEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCEEEEEECCCCHHHHHHcCCCc---ccEEE
Confidence 4455566889999999888999999999999875433 4444433345776654 5778999999997 99999
Q ss_pred EEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 236 FLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
+++.+. ....+.|. +.++|.+||.+.
T Consensus 85 ~~~~G~-~~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 85 VYKNGS-SVDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp EEETTE-EEEEEESC-CHHHHHHHHHTT
T ss_pred EEECCc-EEEEEeCC-CHHHHHHHHHHh
Confidence 997543 55678888 999999999864
No 278
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.61 E-value=3.9e-07 Score=64.59 Aligned_cols=95 Identities=15% Similarity=0.283 Sum_probs=71.6
Q ss_pred ceecCCHHHHHHhhc--cCCeEEEEEecCCCCccH---HHHHHHhccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEE
Q 021976 164 TYSITTTDEAERILT--VESKLVLGFLHDLEGMES---EELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (304)
Q Consensus 164 ~~~l~~~~~~~~~~~--~~~~~~v~f~~~~~~~~~---~~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv 235 (304)
+..+++.+++++.+. .++++++.|+.+||+++. +.+..++....++.|..+ .+++++++|++.+ .|+++
T Consensus 1 v~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~~ 77 (104)
T 2vim_A 1 MRVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIPEVEFAKVDVDQNEEAAAKYSVTA---MPTFV 77 (104)
T ss_dssp CEECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCS---SSEEE
T ss_pred CeecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCCCCEEEEEeccCCHHHHHHcCCcc---ccEEE
Confidence 356778888988887 577899999999998753 334455533336777654 5778999999996 99999
Q ss_pred EEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 236 FLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
+++.+. ....+.| .+.++|.+||++.
T Consensus 78 ~~~~g~-~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 78 FIKDGK-EVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp EEETTE-EEEEEES-SCHHHHHHHHHHH
T ss_pred EEeCCc-EEEEEeC-CCHHHHHHHHHhh
Confidence 998543 5566778 6899999999753
No 279
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.61 E-value=4e-07 Score=66.82 Aligned_cols=97 Identities=16% Similarity=0.219 Sum_probs=74.8
Q ss_pred CCceecCCHHHHHHhhccCCeEEEEEecCCCCccHHH---HHHHhc-cCCc-eeEEEe---cCHHHHhhcCCCCCCCCCe
Q 021976 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEE---LAAASK-LHSD-VNFYQT---TSADVAEFFHIHPKSKRPA 233 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~---~~~~a~-~~~~-~~f~~~---~~~~l~~~~~i~~~~~~P~ 233 (304)
.....+++.+++++.++++++++|.|+.+||.++... +..++. +.++ +.|..+ .+++++++|++.+ .|+
T Consensus 15 ~~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~---~Pt 91 (121)
T 2j23_A 15 GSVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRA---MPT 91 (121)
T ss_dssp CCEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCS---SSE
T ss_pred cceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCc---ccE
Confidence 4577889999999999888899999999999985444 444443 3222 666644 5778999999997 999
Q ss_pred EEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 234 LIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 234 lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
+++|+.+ .....+.|. +.++|.+||.+.
T Consensus 92 ~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 92 FVFFKNG-QKIDTVVGA-DPSKLQAAITQH 119 (121)
T ss_dssp EEEEETT-EEEEEEESS-CHHHHHHHHHHH
T ss_pred EEEEECC-eEEeeEcCC-CHHHHHHHHHHh
Confidence 9999754 355667887 999999999863
No 280
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.60 E-value=2.9e-07 Score=65.82 Aligned_cols=96 Identities=11% Similarity=0.158 Sum_probs=71.5
Q ss_pred CceecCCHHHHHHhh--ccCCeEEEEEecCCCCccH---HHHHHHhccCCceeEEEe---cCHHHHhhcCCCCCCCCCeE
Q 021976 163 GTYSITTTDEAERIL--TVESKLVLGFLHDLEGMES---EELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (304)
Q Consensus 163 ~~~~l~~~~~~~~~~--~~~~~~~v~f~~~~~~~~~---~~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~l 234 (304)
.+..+.+.+++++.+ .+++++++.|+++||+++. ..+.+++....++.|..+ .+++++++|++.+ .|++
T Consensus 2 ~v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~---~Pt~ 78 (107)
T 1gh2_A 2 GVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISA---TPTF 78 (107)
T ss_dssp CEEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCS---SSEE
T ss_pred ceEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHhcCCCc---ccEE
Confidence 356777888898888 4578899999999998853 345555533356777754 5788999999997 9999
Q ss_pred EEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 235 IFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 235 v~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
++|+.+. ....+.|. +.++|.+||.+.
T Consensus 79 ~~~~~G~-~~~~~~G~-~~~~l~~~l~~~ 105 (107)
T 1gh2_A 79 QFFRNKV-RIDQYQGA-DAVGLEEKIKQH 105 (107)
T ss_dssp EEEETTE-EEEEEESS-CHHHHHHHHHHH
T ss_pred EEEECCe-EEEEEeCC-CHHHHHHHHHHh
Confidence 9997553 45567784 556699998753
No 281
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.60 E-value=2.9e-07 Score=66.35 Aligned_cols=100 Identities=13% Similarity=0.115 Sum_probs=73.4
Q ss_pred hCCCceecCCHHHHHHhhccCCeEEEEEecCCCCccH---HHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCC
Q 021976 160 MTLGTYSITTTDEAERILTVESKLVLGFLHDLEGMES---EELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRP 232 (304)
Q Consensus 160 ~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~---~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P 232 (304)
+...+..+++.+.....++++++++|.|+++||.++. ..+.+++ .+.+++.+..+ .+++++++|++.+ .|
T Consensus 3 m~~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~P 79 (112)
T 1t00_A 3 MAGTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMS---IP 79 (112)
T ss_dssp SSCCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCS---SS
T ss_pred ccceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCc---cc
Confidence 3445667766554455666778899999999998754 3344554 45456777654 5788999999997 99
Q ss_pred eEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 233 ~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
++++++.+. ....+.|..+.+++.+||.+.
T Consensus 80 t~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~ 109 (112)
T 1t00_A 80 TLNVYQGGE-VAKTIVGAKPKAAIVRDLEDF 109 (112)
T ss_dssp EEEEEETTE-EEEEEESCCCHHHHHHHTHHH
T ss_pred EEEEEeCCE-EEEEEeCCCCHHHHHHHHHHH
Confidence 999996553 556788999999999998753
No 282
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.59 E-value=1.2e-07 Score=74.19 Aligned_cols=122 Identities=12% Similarity=0.097 Sum_probs=80.1
Q ss_pred HHHHHhCCCceecCCHHHHHHhhcc--CCeEEEEEec-------CCCCcc---HHHHHHHh-ccC-----CceeEEEe--
Q 021976 155 WVREKMTLGTYSITTTDEAERILTV--ESKLVLGFLH-------DLEGME---SEELAAAS-KLH-----SDVNFYQT-- 214 (304)
Q Consensus 155 ~i~~~~~~~~~~l~~~~~~~~~~~~--~~~~~v~f~~-------~~~~~~---~~~~~~~a-~~~-----~~~~f~~~-- 214 (304)
.+.......+.+++ .+++++++.. +..++|.|.. .||+++ ...+..+| ++. +++.|+.+
T Consensus 11 l~~l~~~~~vi~lt-~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~ 89 (178)
T 3ga4_A 11 ILQLKDDTGVITVT-ADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDV 89 (178)
T ss_dssp HHTTCCTTSEEECC-TTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEET
T ss_pred HHHhhccCCCEECC-HHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEEC
Confidence 33333456677874 4667777753 3467777877 499874 44566665 344 67888865
Q ss_pred -cCHHHHhhcCCCCCCCCCeEEEEecCCCce-----------ecc---cC-CCCHHHHHHHHhcCCCCcEEeeCccchhh
Q 021976 215 -TSADVAEFFHIHPKSKRPALIFLHLEAGKA-----------TPF---RH-QFTRLAIANFVTHTKHPLVVTLTIHNAQF 278 (304)
Q Consensus 215 -~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~-----------~~y---~g-~~~~~~i~~fi~~~~~p~~~~l~~~~~~~ 278 (304)
.+++++.+|+|++ .|++++|+++.... ..| .| .++.+.|.+||.+..-+.++-..+-++.+
T Consensus 90 d~~~~la~~~~I~s---iPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~I~rp~ny~~ 166 (178)
T 3ga4_A 90 NEVPQLVKDLKLQN---VPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISITVPQAFNVQE 166 (178)
T ss_dssp TTCHHHHHHTTCCS---SCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCCCCCSCC---
T ss_pred ccCHHHHHHcCCCC---CCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCccccCCCChHH
Confidence 7889999999997 99999999886433 445 24 68899999999976544443333344444
Q ss_pred hh
Q 021976 279 VF 280 (304)
Q Consensus 279 ~~ 280 (304)
-|
T Consensus 167 ~~ 168 (178)
T 3ga4_A 167 EF 168 (178)
T ss_dssp --
T ss_pred hh
Confidence 43
No 283
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.59 E-value=2.1e-07 Score=68.62 Aligned_cols=97 Identities=12% Similarity=0.203 Sum_probs=68.8
Q ss_pred CCceecCCHHHHH-HhhccCCeEEEEEecCCCC--------------cc---HHHHHHHh-ccCCceeEEEe---cCHHH
Q 021976 162 LGTYSITTTDEAE-RILTVESKLVLGFLHDLEG--------------ME---SEELAAAS-KLHSDVNFYQT---TSADV 219 (304)
Q Consensus 162 ~~~~~l~~~~~~~-~~~~~~~~~~v~f~~~~~~--------------~~---~~~~~~~a-~~~~~~~f~~~---~~~~l 219 (304)
..+..+++ ++++ ..++++++++|.|+++||+ ++ ...+..++ .+.+++.+..+ .++++
T Consensus 3 ~~v~~l~~-~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l 81 (123)
T 1oaz_A 3 DKIIHLTD-DSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 81 (123)
T ss_dssp CSCEECCS-TTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTT
T ss_pred CccEecCh-hhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHH
Confidence 34666654 4554 5567788999999999999 74 34444444 34445666654 57789
Q ss_pred HhhcCCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 220 AEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 220 ~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
+++|++.+ +|++++|+.+ .....+.|..+.++|.+||++.
T Consensus 82 ~~~~~v~~---~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 82 APKYGIRG---IPTLLLFKNG-EVAATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp GGGGTCCB---SSEEEEEESS-SEEEEEESCCCHHHHHHHHTTT
T ss_pred HHHcCCCc---cCEEEEEECC-EEEEEEeCCCCHHHHHHHHHHH
Confidence 99999997 9999999544 3566789999999999999864
No 284
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.59 E-value=2e-07 Score=70.17 Aligned_cols=101 Identities=15% Similarity=0.231 Sum_probs=76.4
Q ss_pred CceecCCHHHHHHhhccCCeEEEEEecCCCCcc---HHHHHHHh-ccCC---ceeEEEe---cCHHHHhhcCCCCCCCCC
Q 021976 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAAS-KLHS---DVNFYQT---TSADVAEFFHIHPKSKRP 232 (304)
Q Consensus 163 ~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~---~~~f~~~---~~~~l~~~~~i~~~~~~P 232 (304)
.+..+ +.++++..+.+++.++|.|+.+||.++ ...+..++ .+.+ ++.|..+ .+.+++++|++.. +|
T Consensus 18 ~v~~l-~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~---~P 93 (140)
T 2dj1_A 18 GVWVL-NDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSG---YP 93 (140)
T ss_dssp TEEEC-CTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCS---SS
T ss_pred CCEEc-ChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCc---cC
Confidence 45566 556788888888899999999999874 34455544 3333 3777655 5778999999996 99
Q ss_pred eEEEEecCCCceecccCCCCHHHHHHHHhcCCCCcEE
Q 021976 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHPLVV 269 (304)
Q Consensus 233 ~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p~~~ 269 (304)
++++|+.+ +...|.|..+.+.|.+||.+..-+...
T Consensus 94 t~~~~~~G--~~~~~~g~~~~~~l~~~l~~~~~~~~~ 128 (140)
T 2dj1_A 94 TIKILKKG--QAVDYDGSRTQEEIVAKVREVSQPDWT 128 (140)
T ss_dssp EEEEEETT--EEEECCSCCCHHHHHHHHHHHHSSSCC
T ss_pred eEEEEECC--cEEEcCCCCCHHHHHHHHHHhcCCCCC
Confidence 99999765 377899999999999999986555443
No 285
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.59 E-value=3.6e-07 Score=73.00 Aligned_cols=42 Identities=19% Similarity=0.343 Sum_probs=37.0
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeC
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA 113 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~ 113 (304)
.+++++|.||+.||++|+.+.|.+.++.+++.+++.|..++.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~ 64 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHV 64 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEEEecC
Confidence 468899999999999999999999999999887777777664
No 286
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.58 E-value=3.9e-07 Score=64.81 Aligned_cols=95 Identities=9% Similarity=0.112 Sum_probs=72.9
Q ss_pred CceecCCHHHHHHhhccCCeEEEEEecCCCCccHH---HHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEE
Q 021976 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGMESE---ELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (304)
Q Consensus 163 ~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv 235 (304)
.+..+ +.+++++.+ ++++++|.|+++||.++.. .+..++ .+.+++.+..+ .+++++++|++.+ .|+++
T Consensus 4 ~v~~l-~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~~ 78 (106)
T 3die_A 4 AIVKV-TDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMS---IPTLI 78 (106)
T ss_dssp CCEEC-CTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCS---BSEEE
T ss_pred ceEEC-CHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcc---cCEEE
Confidence 45666 456677777 7889999999999987543 445555 45555776654 6888999999997 99999
Q ss_pred EEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 236 FLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
+++.+ +....+.|..+.++|.+||.+.
T Consensus 79 ~~~~G-~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 79 VFKDG-QPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp EEETT-EEEEEEESCCCHHHHHHHHHTT
T ss_pred EEeCC-eEEEEEeCCCCHHHHHHHHHHh
Confidence 99744 3566788999999999999864
No 287
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=98.57 E-value=3.6e-07 Score=75.20 Aligned_cols=88 Identities=9% Similarity=0.046 Sum_probs=67.8
Q ss_pred CCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCccc-----------------------------HHHHH
Q 021976 73 NRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE-----------------------------KDLAK 121 (304)
Q Consensus 73 ~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-----------------------------~~~~~ 121 (304)
++.+++.|| ++||+.|..+.+.+.++++++++ ++.++.|.++.. .++++
T Consensus 29 k~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~ 108 (233)
T 2v2g_A 29 NSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAV 108 (233)
T ss_dssp SSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHH
T ss_pred CCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHHH
Confidence 347888998 99999999999999999999875 788888876531 24567
Q ss_pred hCCCc------------cccEEEEEe-CCeEEEEeeCC----CCHHHHHHHHHHHh
Q 021976 122 EYNIL------------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (304)
Q Consensus 122 ~~~v~------------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (304)
.||+. .+|++++++ +|++...+.|+ ++.+++.+.|+...
T Consensus 109 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 109 KLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSLQ 164 (233)
T ss_dssp HTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 77874 479999997 88777776543 56788888776543
No 288
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.57 E-value=4.8e-07 Score=65.19 Aligned_cols=96 Identities=15% Similarity=0.128 Sum_probs=69.8
Q ss_pred ecCCHHHHHHhhccCCeEEEEEecCCCCccHHH---HHHHhccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEEEEec
Q 021976 166 SITTTDEAERILTVESKLVLGFLHDLEGMESEE---LAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHL 239 (304)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~---~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv~~~~ 239 (304)
.+.+.+++ +.+.++++++|.|+++||+++... +..++....++.|..+ .+++++++|++.+ .|++++|++
T Consensus 6 ~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~~~~~ 81 (110)
T 2l6c_A 6 DITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAPQVAISSVDSEARPELMKELGFER---VPTLVFIRD 81 (110)
T ss_dssp BCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCTTSCEEEEEGGGCHHHHHHTTCCS---SCEEEEEES
T ss_pred ecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCCCcEEEEEcCcCCHHHHHHcCCcc---cCEEEEEEC
Confidence 33455667 555667889999999999985444 4455543345666653 5788999999997 999999965
Q ss_pred CCCceecccCCCCHHHHHHHHhcCCCC
Q 021976 240 EAGKATPFRHQFTRLAIANFVTHTKHP 266 (304)
Q Consensus 240 ~~~~~~~y~g~~~~~~i~~fi~~~~~p 266 (304)
+ .....+.|..+.++|.+++....-|
T Consensus 82 G-~~v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 82 G-KVAKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp S-SEEEEEESCCCHHHHHHHHHTC---
T ss_pred C-EEEEEEcCCCCHHHHHHHHHHHhhh
Confidence 4 3667788989999999999976543
No 289
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.57 E-value=4.7e-07 Score=69.65 Aligned_cols=97 Identities=19% Similarity=0.164 Sum_probs=74.6
Q ss_pred CCceecCCHHHHHHhhccCCeEEEEEecCCCCcc---HHHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeE
Q 021976 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~l 234 (304)
..+..+ +.+++++.++++.+++|.|+.+||.+. ...+.+++ .+.+++.|..+ .+++++++|++.+ +|++
T Consensus 47 ~~~~~l-~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~~---~Pt~ 122 (155)
T 2ppt_A 47 GKVAGI-DPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQG---IPAF 122 (155)
T ss_dssp SSEEEC-CHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCCS---SSEE
T ss_pred CCCccC-CHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCCc---CCEE
Confidence 345555 467788877777899999999999874 34455555 45667877765 5778999999997 9999
Q ss_pred EEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 235 IFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 235 v~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
++|+++ .....+.|..+.+.|.+||.+.
T Consensus 123 ~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 150 (155)
T 2ppt_A 123 ILFHKG-RELARAAGARPASELVGFVRGK 150 (155)
T ss_dssp EEEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred EEEeCC-eEEEEecCCCCHHHHHHHHHHH
Confidence 999654 3556788999999999999864
No 290
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.56 E-value=4.6e-07 Score=64.78 Aligned_cols=95 Identities=13% Similarity=0.216 Sum_probs=70.4
Q ss_pred CceecCCHHHHH-HhhccCCeEEEEEecCCCCccH---HHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeE
Q 021976 163 GTYSITTTDEAE-RILTVESKLVLGFLHDLEGMES---EELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (304)
Q Consensus 163 ~~~~l~~~~~~~-~~~~~~~~~~v~f~~~~~~~~~---~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~l 234 (304)
.+..++. ++++ ..++++++++|.|+++||+++. +.+..++ .+.+++.+..+ .+++++++|++.+ .|++
T Consensus 3 ~v~~l~~-~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~ 78 (108)
T 2trx_A 3 KIIHLTD-DSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRG---IPTL 78 (108)
T ss_dssp TEEECCT-TTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCS---SSEE
T ss_pred cceecch-hhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcc---cCEE
Confidence 4556644 4555 4556778999999999998753 3445555 45556777754 5778999999997 9999
Q ss_pred EEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 235 IFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 235 v~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
++|+.+ .....+.|..+.+.|.+||.+
T Consensus 79 ~~~~~G-~~~~~~~G~~~~~~l~~~l~~ 105 (108)
T 2trx_A 79 LLFKNG-EVAATKVGALSKGQLKEFLDA 105 (108)
T ss_dssp EEEETT-EEEEEEESCCCHHHHHHHHHH
T ss_pred EEEeCC-EEEEEEecCCCHHHHHHHHHH
Confidence 999644 355678899999999999975
No 291
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.56 E-value=2.4e-07 Score=66.34 Aligned_cols=96 Identities=8% Similarity=0.055 Sum_probs=73.3
Q ss_pred CCceecCCHHHHHHhhccCCeEEEEEecCCCCccHH---HHHHHhccCCceeEEEe---cCHH----HHhhcCCCCCCCC
Q 021976 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSAD----VAEFFHIHPKSKR 231 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~----l~~~~~i~~~~~~ 231 (304)
.....+++.++++++++++.+++|.|+++||++... .|...+. ..++.|+.+ .+++ ++++|+|+. ..
T Consensus 6 ~~~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~-~~~v~~~~vdVde~r~~Sn~IA~~~~V~h--~s 82 (112)
T 3iv4_A 6 GVAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLY-ERDMDGYYLIVQQERDLSDYIAKKTNVKH--ES 82 (112)
T ss_dssp GCEEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHH-HHTCCEEEEEGGGGHHHHHHHHHHHTCCC--CS
T ss_pred cceeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhc-cCCceEEEEEeecCchhhHHHHHHhCCcc--CC
Confidence 345678999999999998999999999999998544 4444443 255666643 4544 899999993 38
Q ss_pred CeEEEEecCCCceecccCCCCHHHHHHHH
Q 021976 232 PALIFLHLEAGKATPFRHQFTRLAIANFV 260 (304)
Q Consensus 232 P~lv~~~~~~~~~~~y~g~~~~~~i~~fi 260 (304)
|++++|++|......-.+.++.+.|.+.+
T Consensus 83 Pq~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 83 PQAFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp SEEEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred CeEEEEECCEEEEEeeccccCHHHHHHhh
Confidence 99999999976666667889999888765
No 292
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.56 E-value=3.2e-08 Score=72.60 Aligned_cols=71 Identities=11% Similarity=0.228 Sum_probs=51.5
Q ss_pred hcHHHHhcCCCcEEEEEEcCCChhhhhh-HHHHHHHHHHhhCCcEEEEEeCcccH-------HHHHhCCCccccEEEEEe
Q 021976 64 KNFSEFMGKNRNVMVMFYANWCYWSKKL-APEFAAAAKMLKGEADLVMVDAYLEK-------DLAKEYNILAYPTLYLFV 135 (304)
Q Consensus 64 ~~~~~~~~~~~~~lv~f~a~wC~~C~~~-~~~~~~~~~~~~~~~~~~~vd~~~~~-------~~~~~~~v~~~Pt~~~~~ 135 (304)
+.+++.+...+ ++.|+++||++|++. .+.+++... ..+.+..+|++.++ ++.+.+|+.++|++ |.
T Consensus 16 ~~~~~~i~~~~--Vvvf~~~~Cp~C~~alk~~L~~~~~---~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v--fi 88 (118)
T 3c1r_A 16 KHVKDLIAENE--IFVASKTYCPYCHAALNTLFEKLKV---PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI--YI 88 (118)
T ss_dssp HHHHHHHHHSS--EEEEECSSCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EE
T ss_pred HHHHHHHccCc--EEEEEcCCCcCHHHHHHHHHHHcCC---CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE--EE
Confidence 45566665443 556999999999998 777765431 13778888888763 57888999999987 55
Q ss_pred CCeEEE
Q 021976 136 AGVRQF 141 (304)
Q Consensus 136 ~g~~~~ 141 (304)
+|+.+.
T Consensus 89 ~g~~ig 94 (118)
T 3c1r_A 89 NGKHIG 94 (118)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 886543
No 293
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.56 E-value=2.6e-07 Score=69.71 Aligned_cols=98 Identities=12% Similarity=0.035 Sum_probs=74.6
Q ss_pred CCCceecCCHHHHH-HhhccCCeEEEEEecCCCCccHH---HHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCC
Q 021976 161 TLGTYSITTTDEAE-RILTVESKLVLGFLHDLEGMESE---ELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRP 232 (304)
Q Consensus 161 ~~~~~~l~~~~~~~-~~~~~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P 232 (304)
...+..+ +.+++. ..++++++++|.|+.+||.++.. .+..++ .+.+++.|..+ .+++++++|++.+ +|
T Consensus 5 ~~~v~~l-~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~P 80 (140)
T 3hz4_A 5 GSSIIEF-EDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQG---TP 80 (140)
T ss_dssp TTTEEEE-CHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCE---ES
T ss_pred CcceEEc-chHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCc---CC
Confidence 3456677 445666 77777889999999999987543 445555 45566777754 6889999999997 99
Q ss_pred eEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 233 ~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
++++|+.+. ....+.|..+.+.|.+||.+.
T Consensus 81 t~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~ 110 (140)
T 3hz4_A 81 TFKFFCHGR-PVWEQVGQIYPSILKNAVRDM 110 (140)
T ss_dssp EEEEEETTE-EEEEEESSCCHHHHHHHHHHH
T ss_pred EEEEEeCCc-EEEEEcCCCCHHHHHHHHHHH
Confidence 999997553 556788999999999999854
No 294
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.56 E-value=8.7e-07 Score=63.83 Aligned_cols=95 Identities=17% Similarity=0.249 Sum_probs=68.8
Q ss_pred ceecCCHHHHHHhhcc---CCeEEEEEecCCCCccHH---HHHHHhcc--CCceeEEEe---cCHHHHhhcCCCCCCCCC
Q 021976 164 TYSITTTDEAERILTV---ESKLVLGFLHDLEGMESE---ELAAASKL--HSDVNFYQT---TSADVAEFFHIHPKSKRP 232 (304)
Q Consensus 164 ~~~l~~~~~~~~~~~~---~~~~~v~f~~~~~~~~~~---~~~~~a~~--~~~~~f~~~---~~~~l~~~~~i~~~~~~P 232 (304)
+..+++.+++++.+.+ +.+++|.|+++||+++.. .+..++.. ..++.|..+ .+++++++|++.+ +|
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~---~P 78 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISA---VP 78 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCS---SS
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCc---cc
Confidence 4667787889888875 778999999999998543 34455532 455777754 5788999999997 99
Q ss_pred eEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 233 ~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
++++++.+ .....+.|. +.++|.+||.+.
T Consensus 79 t~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~ 107 (112)
T 3d6i_A 79 YFIIIHKG-TILKELSGA-DPKEYVSLLEDC 107 (112)
T ss_dssp EEEEEETT-EEEEEECSC-CHHHHHHHHHHH
T ss_pred EEEEEECC-EEEEEecCC-CHHHHHHHHHHH
Confidence 99999754 345567786 556799998753
No 295
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.55 E-value=5.6e-07 Score=65.76 Aligned_cols=99 Identities=15% Similarity=0.184 Sum_probs=73.9
Q ss_pred CCCceecCCHHHHHHhhccCCeEEEEEecCCCCccH---HHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCe
Q 021976 161 TLGTYSITTTDEAERILTVESKLVLGFLHDLEGMES---EELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPA 233 (304)
Q Consensus 161 ~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~---~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~ 233 (304)
...+..+++.+.....++++++++|.|+++||.++. ..+..++ .+.+++.|..+ .+++++++|++.+ .|+
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~---~Pt 87 (121)
T 2i1u_A 11 KSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVS---IPT 87 (121)
T ss_dssp -CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCS---SSE
T ss_pred cccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCc---CCE
Confidence 456777766554455667788899999999998743 3345555 45456777654 5788999999997 999
Q ss_pred EEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 234 LIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 234 lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
+++++.+ .....+.|..+.+.|.+||.+.
T Consensus 88 ~~~~~~g-~~~~~~~G~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 88 LILFKDG-QPVKRIVGAKGKAALLRELSDV 116 (121)
T ss_dssp EEEEETT-EEEEEEESCCCHHHHHHHTCSC
T ss_pred EEEEECC-EEEEEecCCCCHHHHHHHHHHH
Confidence 9999744 3556788999999999999865
No 296
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.55 E-value=2.1e-07 Score=74.42 Aligned_cols=85 Identities=18% Similarity=0.241 Sum_probs=64.3
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCc-------------------------------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------------------------------------- 114 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~------------------------------------- 114 (304)
+++++++.||.+||++|+.+.|.+.++.+++++++.+..+...
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~~~~~s~~aa~a~~aa~~~~~~~~~~~~lf~~~~~~~~ 100 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKI 100 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEECCCSGGGHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSS
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEeccccCcccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHhCC
Confidence 4678999999999999999999999999998766666555431
Q ss_pred -------------------c------------------cHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHHH
Q 021976 115 -------------------L------------------EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVR 157 (304)
Q Consensus 115 -------------------~------------------~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~ 157 (304)
. +..+++++||.++||+++ +|+.. ..|..+.+.+.+.|.
T Consensus 101 ~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~vi--ng~~~--~~g~~~~~~l~~~i~ 176 (195)
T 2znm_A 101 RLENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQKLTEQYRIDSTPTVIV--GGKYR--VIFNNGFDGGVHTIK 176 (195)
T ss_dssp CTTSHHHHHHHHHTCSSSCHHHHHHHHTSHHHHHHHHHHHHHHHHTTCCSSSEEEE--TTTEE--ECCCSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCCCCeEEE--CCEEE--EcCCCCHHHHHHHHH
Confidence 0 113467789999999654 77432 457777888888887
Q ss_pred HHh
Q 021976 158 EKM 160 (304)
Q Consensus 158 ~~~ 160 (304)
+.+
T Consensus 177 ~~l 179 (195)
T 2znm_A 177 ELV 179 (195)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 297
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.55 E-value=4.6e-07 Score=68.96 Aligned_cols=97 Identities=12% Similarity=0.223 Sum_probs=75.1
Q ss_pred CCceecCCHHHHHHhhccCCeEEEEEecCCCCcc---HHHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeE
Q 021976 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~l 234 (304)
..+..+ +.++++..+..+++++|.|+.+||.+. ...+.+++ .+.+++.|..+ .+++++++|++.+ +|++
T Consensus 38 ~~v~~l-~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~---~Pt~ 113 (148)
T 3p2a_A 38 GEVINA-TAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRS---IPTI 113 (148)
T ss_dssp CCCEEC-CTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCS---SSEE
T ss_pred CCceec-CHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCCc---cCEE
Confidence 345555 446788888888899999999999874 34455555 45567777754 6789999999997 9999
Q ss_pred EEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 235 IFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 235 v~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
++|+.+. ....+.|..+.+.|.+||.+.
T Consensus 114 ~~~~~G~-~~~~~~G~~~~~~l~~~l~~~ 141 (148)
T 3p2a_A 114 MLYRNGK-MIDMLNGAVPKAPFDNWLDEQ 141 (148)
T ss_dssp EEEETTE-EEEEESSCCCHHHHHHHHHHH
T ss_pred EEEECCe-EEEEEeCCCCHHHHHHHHHHH
Confidence 9997553 556789999999999999864
No 298
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.55 E-value=4.7e-07 Score=64.66 Aligned_cols=96 Identities=7% Similarity=0.072 Sum_probs=72.3
Q ss_pred ceecCCHHHHHHhhccCCeEEEEEecCCCCccH---HHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEEE
Q 021976 164 TYSITTTDEAERILTVESKLVLGFLHDLEGMES---EELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIF 236 (304)
Q Consensus 164 ~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~---~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv~ 236 (304)
+..+ +.++++..++.+++++|.|+.+||..+. +.+..++ .+.+++.+..+ .+++++++|++.+ .|++++
T Consensus 3 v~~l-~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~~~ 78 (109)
T 2yzu_A 3 PIEV-TDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMS---IPTVIL 78 (109)
T ss_dssp CEEC-CTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCS---SSEEEE
T ss_pred ceEc-cHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCc---CCEEEE
Confidence 4455 3456667777888999999999998754 3445554 45556777754 5788999999997 999999
Q ss_pred EecCCCceecccCCCCHHHHHHHHhcCC
Q 021976 237 LHLEAGKATPFRHQFTRLAIANFVTHTK 264 (304)
Q Consensus 237 ~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 264 (304)
|+.+ .....+.|..+.++|.+||.+..
T Consensus 79 ~~~g-~~~~~~~g~~~~~~l~~~l~~~l 105 (109)
T 2yzu_A 79 FKDG-QPVEVLVGAQPKRNYQAKIEKHL 105 (109)
T ss_dssp EETT-EEEEEEESCCCHHHHHHHHHTTC
T ss_pred EeCC-cEeeeEeCCCCHHHHHHHHHHHh
Confidence 9644 34557889999999999998653
No 299
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.55 E-value=4.8e-07 Score=65.83 Aligned_cols=100 Identities=17% Similarity=0.274 Sum_probs=74.4
Q ss_pred CceecCCHHHHHHhhccCCeEEEEEecCCCCcc---HHHHHHHh-ccC---CceeEEEe---cCHHHHhhcCCCCCCCCC
Q 021976 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAAS-KLH---SDVNFYQT---TSADVAEFFHIHPKSKRP 232 (304)
Q Consensus 163 ~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~---~~~~f~~~---~~~~l~~~~~i~~~~~~P 232 (304)
.+..+ +.++++..+.+++.++|.|+.+||.++ ...+..++ .+. .++.|..+ .+++++++|++.+ .|
T Consensus 8 ~v~~l-~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~---~P 83 (120)
T 1mek_A 8 HVLVL-RKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRG---YP 83 (120)
T ss_dssp TEEEC-CTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCS---SS
T ss_pred CcEEe-chhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCc---cc
Confidence 35555 446677788888899999999999874 45555555 333 34666544 4668999999997 99
Q ss_pred eEEEEecCCC-ceecccCCCCHHHHHHHHhcCCCC
Q 021976 233 ALIFLHLEAG-KATPFRHQFTRLAIANFVTHTKHP 266 (304)
Q Consensus 233 ~lv~~~~~~~-~~~~y~g~~~~~~i~~fi~~~~~p 266 (304)
++++|+++.. ....|.|..+.+.|.+||.+..-|
T Consensus 84 t~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~ 118 (120)
T 1mek_A 84 TIKFFRNGDTASPKEYTAGREADDIVNWLKKRTGP 118 (120)
T ss_dssp EEEEEESSCSSSCEECCCCSSHHHHHHHHHTTSCC
T ss_pred EEEEEeCCCcCCcccccCccCHHHHHHHHHhccCC
Confidence 9999976642 237889999999999999986544
No 300
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.54 E-value=3.4e-07 Score=74.15 Aligned_cols=104 Identities=8% Similarity=0.104 Sum_probs=79.9
Q ss_pred CceecCCHHHHHHhhccCCeEEEEEecCCCCccHH---HHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEE
Q 021976 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGMESE---ELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (304)
Q Consensus 163 ~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv 235 (304)
.+..+ +.++++..+.++++++|.|+.+||+++.. .+..++ .+.+++.|+.+ .+++++++|++.+ +|+++
T Consensus 98 ~v~~l-~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~ 173 (210)
T 3apq_A 98 EIITL-ERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNS---YPSLF 173 (210)
T ss_dssp TSEEC-CHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCS---SSEEE
T ss_pred ceEEe-cHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCc---CCeEE
Confidence 45555 56778888888889999999999988543 455555 45566777754 6788999999997 99999
Q ss_pred EEecCCCceecccCCCCHHHHHHHHhcCCCCcEEee
Q 021976 236 FLHLEAGKATPFRHQFTRLAIANFVTHTKHPLVVTL 271 (304)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p~~~~l 271 (304)
+|+.+. ....+.|..+.++|.+||.+..-+.+.++
T Consensus 174 ~~~~G~-~~~~~~G~~~~~~l~~~i~~~l~~~~~~i 208 (210)
T 3apq_A 174 IFRSGM-AAVKYNGDRSKESLVAFAMQHVRSTVTEL 208 (210)
T ss_dssp EECTTS-CCEECCSCCCHHHHHHHHHHHHHCCSSCC
T ss_pred EEECCC-ceeEecCCCCHHHHHHHHHHhCcccceec
Confidence 995553 57789999999999999998655554444
No 301
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.54 E-value=5.4e-07 Score=67.03 Aligned_cols=97 Identities=16% Similarity=0.171 Sum_probs=72.8
Q ss_pred CCceecCCHHHHHHhh-ccCCeEEEEEecCCCCccH---HHHHHHh-ccC----CceeEEEe---cCHHHHhhcCCCCCC
Q 021976 162 LGTYSITTTDEAERIL-TVESKLVLGFLHDLEGMES---EELAAAS-KLH----SDVNFYQT---TSADVAEFFHIHPKS 229 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~-~~~~~~~v~f~~~~~~~~~---~~~~~~a-~~~----~~~~f~~~---~~~~l~~~~~i~~~~ 229 (304)
..+..++. +++++.+ +++++++|.|+.+||.++. ..+..++ .+. +++.|+.+ .+++++++|++..
T Consensus 7 ~~v~~l~~-~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~-- 83 (133)
T 1x5d_A 7 GDVIELTD-DSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRG-- 83 (133)
T ss_dssp CSCEECCT-THHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCS--
T ss_pred CcCEEcCH-hhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCe--
Confidence 34566654 5666554 6678899999999998743 3444444 333 56777754 5778999999997
Q ss_pred CCCeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 230 KRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 230 ~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
+|++++|+++ .....|.|..+.+.|.+||.+.
T Consensus 84 -~Pt~~~~~~g-~~~~~~~G~~~~~~l~~~l~~~ 115 (133)
T 1x5d_A 84 -FPTIKIFQKG-ESPVDYDGGRTRSDIVSRALDL 115 (133)
T ss_dssp -SSEEEEEETT-EEEEEECSCCSHHHHHHHHHHH
T ss_pred -eCeEEEEeCC-CceEEecCCCCHHHHHHHHHHH
Confidence 9999999985 3677889999999999999864
No 302
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.53 E-value=3.3e-07 Score=67.22 Aligned_cols=97 Identities=13% Similarity=0.166 Sum_probs=72.3
Q ss_pred CCceecCCHHHH-HHhhccCCeEEEEEecCCCCccH---HHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCe
Q 021976 162 LGTYSITTTDEA-ERILTVESKLVLGFLHDLEGMES---EELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPA 233 (304)
Q Consensus 162 ~~~~~l~~~~~~-~~~~~~~~~~~v~f~~~~~~~~~---~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~ 233 (304)
..+..++ .+++ +..++++++++|.|+++||+++. ..+..++ .+.+++.|..+ .+++++++|++.+ +|+
T Consensus 3 ~~v~~l~-~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~---~Pt 78 (122)
T 3aps_A 3 QASIDLT-PQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKA---YPS 78 (122)
T ss_dssp CCSEECC-HHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCS---SSE
T ss_pred cchhcCC-HHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCc---cce
Confidence 4566674 4566 55677788999999999998753 3444554 45557777755 5788999999997 999
Q ss_pred EEEEecCCCceecccCC----CCHHHHHHHHhcC
Q 021976 234 LIFLHLEAGKATPFRHQ----FTRLAIANFVTHT 263 (304)
Q Consensus 234 lv~~~~~~~~~~~y~g~----~~~~~i~~fi~~~ 263 (304)
+++|+.++ ....+.|. .+.+.|.+||.+.
T Consensus 79 ~~~~~~~~-~~~~~~g~~~~~~~~~~l~~~l~~~ 111 (122)
T 3aps_A 79 VKLYQYER-AKKSIWEEQINSRDAKTIAALIYGK 111 (122)
T ss_dssp EEEEEEEG-GGTEEEEEEECCSCHHHHHHHHHHH
T ss_pred EEEEeCCC-ccceeeccccCcCCHHHHHHHHHHH
Confidence 99998765 35556665 7999999999864
No 303
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.53 E-value=4.7e-07 Score=64.35 Aligned_cols=94 Identities=11% Similarity=0.126 Sum_probs=70.3
Q ss_pred eecCCHHHHHHhhccCCeEEEEEecCCCCccHH---HHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEEEE
Q 021976 165 YSITTTDEAERILTVESKLVLGFLHDLEGMESE---ELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFL 237 (304)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv~~ 237 (304)
..+++ ++++..+++++++++.|+++||+++.. .+.+++ .+.+++.+..+ .+++++++|++.+ .|+++++
T Consensus 3 ~~l~~-~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~---~Pt~~~~ 78 (105)
T 1nsw_A 3 MTLTD-ANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMS---IPTLILF 78 (105)
T ss_dssp EEECT-TTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCS---SSEEEEE
T ss_pred eeccH-HhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCcc---ccEEEEE
Confidence 44533 556677777889999999999987543 344454 35455676654 5788999999997 9999999
Q ss_pred ecCCCceecccCCCCHHHHHHHHhcC
Q 021976 238 HLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 238 ~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
+++ .....+.|..+.+.+.+||.+.
T Consensus 79 ~~G-~~~~~~~G~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 79 KGG-RPVKQLIGYQPKEQLEAQLADV 103 (105)
T ss_dssp ETT-EEEEEEESCCCHHHHHHHTTTT
T ss_pred eCC-eEEEEEecCCCHHHHHHHHHHH
Confidence 544 3556788999999999999864
No 304
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.53 E-value=4.9e-07 Score=66.10 Aligned_cols=95 Identities=16% Similarity=0.212 Sum_probs=70.3
Q ss_pred ceecCCHHHHHHh-hccCCeEEEEEecCCCCccHH---HHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEE
Q 021976 164 TYSITTTDEAERI-LTVESKLVLGFLHDLEGMESE---ELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (304)
Q Consensus 164 ~~~l~~~~~~~~~-~~~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv 235 (304)
.....+.+++++. ++++++++|.|+.+||.++.. .+.+++ .+.+++.+..+ .+++++++|++.+ .|+++
T Consensus 14 ~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~---~Pt~~ 90 (119)
T 1w4v_A 14 TFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSA---VPTVL 90 (119)
T ss_dssp EEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCS---SSEEE
T ss_pred EEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCc---ccEEE
Confidence 3344466777664 456778999999999987543 344444 45556777654 5778999999997 99999
Q ss_pred EEecCCCceecccCCCCHHHHHHHHhc
Q 021976 236 FLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
+|+.+ .....+.|..+.+.|.+||.+
T Consensus 91 ~~~~G-~~~~~~~G~~~~~~l~~~l~~ 116 (119)
T 1w4v_A 91 AMKNG-DVVDKFVGIKDEDQLEAFLKK 116 (119)
T ss_dssp EEETT-EEEEEEESCCCHHHHHHHHHH
T ss_pred EEeCC-cEEEEEcCCCCHHHHHHHHHH
Confidence 99644 355678898899999999975
No 305
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.53 E-value=4.3e-07 Score=67.43 Aligned_cols=98 Identities=12% Similarity=0.210 Sum_probs=72.6
Q ss_pred hCCCceecCCHHHHH-HhhccCCeEEEEEecCCCCcc---HHHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCC
Q 021976 160 MTLGTYSITTTDEAE-RILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKR 231 (304)
Q Consensus 160 ~~~~~~~l~~~~~~~-~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~ 231 (304)
+...+..++. ++++ ..++++++++|.|+++||.++ ...+.+++ .+.+++.|..+ .+++++++|++.+ .
T Consensus 20 m~~~v~~l~~-~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~ 95 (128)
T 2o8v_B 20 HSDKIIHLTD-DSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRG---I 95 (128)
T ss_dssp -CCCSEEECT-TTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCS---S
T ss_pred cccccEecCh-hhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCc---c
Confidence 3345677744 5555 455678899999999999874 44455555 45556777754 5678999999997 9
Q ss_pred CeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 232 P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
|++++|+.+ .....+.|..+.++|.+||++
T Consensus 96 Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~ 125 (128)
T 2o8v_B 96 PTLLLFKNG-EVAATKVGALSKGQLKEFLDA 125 (128)
T ss_dssp SEEEEEETT-EEEEEEESCCCHHHHHHHHHH
T ss_pred CEEEEEeCC-EEEEEEcCCCCHHHHHHHHHH
Confidence 999999544 355678899999999999975
No 306
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.53 E-value=4.7e-07 Score=66.83 Aligned_cols=103 Identities=12% Similarity=0.123 Sum_probs=75.2
Q ss_pred CCceecCCHHHHHHhhccCCeEEEEEecCCCCccHHH---HHHHh-ccCC-ceeEEEe---cCHHHHhhcCCCCCCCCCe
Q 021976 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEE---LAAAS-KLHS-DVNFYQT---TSADVAEFFHIHPKSKRPA 233 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~---~~~~a-~~~~-~~~f~~~---~~~~l~~~~~i~~~~~~P~ 233 (304)
..+..+ +.+++++.++. .++|.|+.+||.++.+. +.+++ .+.+ ++.|..+ .+++++++|++.. +|+
T Consensus 7 ~~v~~l-~~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~---~Pt 80 (126)
T 1x5e_A 7 GNVRVI-TDENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINA---LPT 80 (126)
T ss_dssp CSEEEC-CTTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCS---SSE
T ss_pred CccEEe-cHHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcc---cCE
Confidence 345666 44667777644 38899999999875443 44444 2332 5666654 6788999999997 999
Q ss_pred EEEEecCCCceecccCCCCHHHHHHHHhcCCCCcEEeeC
Q 021976 234 LIFLHLEAGKATPFRHQFTRLAIANFVTHTKHPLVVTLT 272 (304)
Q Consensus 234 lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p~~~~l~ 272 (304)
+++|+++ +...|.|..+.+.|.+||.+...+.+.+++
T Consensus 81 ~~~~~~G--~~~~~~G~~~~~~l~~~l~~~~~~~~~~~~ 117 (126)
T 1x5e_A 81 IYHCKDG--EFRRYQGPRTKKDFINFISDKEWKSIEPVS 117 (126)
T ss_dssp EEEEETT--EEEECCSCCCHHHHHHHHHTCGGGGSCEEC
T ss_pred EEEEeCC--eEEEeecCCCHHHHHHHHHHHhhccCCCch
Confidence 9999655 467899999999999999987766555544
No 307
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.53 E-value=9.1e-07 Score=66.62 Aligned_cols=98 Identities=15% Similarity=0.275 Sum_probs=72.7
Q ss_pred CCCceecCCHHHHHHhhcc------------CCeEEEEEecCCCCccHH---HHHHHh-ccCCceeEEEe---cCHHHHh
Q 021976 161 TLGTYSITTTDEAERILTV------------ESKLVLGFLHDLEGMESE---ELAAAS-KLHSDVNFYQT---TSADVAE 221 (304)
Q Consensus 161 ~~~~~~l~~~~~~~~~~~~------------~~~~~v~f~~~~~~~~~~---~~~~~a-~~~~~~~f~~~---~~~~l~~ 221 (304)
...+..+ +.+++...+.+ +.+++|.|+.+||.++.. .+..++ .+.+++.+..+ .++++++
T Consensus 21 ~~~v~~l-~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 99 (141)
T 3hxs_A 21 QSGTIHL-TRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELAR 99 (141)
T ss_dssp --CCEEC-CHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHH
T ss_pred CCCcccc-cHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHHH
Confidence 3456666 55666655543 678999999999998544 445555 45556776654 6789999
Q ss_pred hcCCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 222 FFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 222 ~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
+|++.+ +|++++|+.++ ....+.|..+.+.|.+||.+.
T Consensus 100 ~~~v~~---~Pt~~~~~~~g-~~~~~~G~~~~~~l~~~l~~~ 137 (141)
T 3hxs_A 100 DFGIQS---IPTIWFVPMKG-EPQVNMGALSKEQLKGYIDKV 137 (141)
T ss_dssp HTTCCS---SSEEEEECSSS-CCEEEESCCCHHHHHHHHHHT
T ss_pred HcCCCC---cCEEEEEeCCC-CEEEEeCCCCHHHHHHHHHHH
Confidence 999997 99999997665 445889999999999999865
No 308
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=98.53 E-value=1.9e-07 Score=71.14 Aligned_cols=80 Identities=16% Similarity=0.240 Sum_probs=62.1
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeC--------------------------------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA-------------------------------------- 113 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~-------------------------------------- 113 (304)
+++.+++.|..++|++|+++.+.++++ . ++.+...+.
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~-~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~~ 87 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM----T-DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVG 87 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC----C-SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc----C-ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCCc
Confidence 568899999999999999999988754 2 344433321
Q ss_pred --------cccHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 114 --------YLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 114 --------~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+++.++++++||+++||+++ .+|+ .+.|..+.+.|.++|.+..
T Consensus 88 ~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~---~i~G~~~~~~l~~~i~~~~ 138 (147)
T 3gv1_A 88 GSICDNPVAETTSLGEQFGFNGTPTLVF-PNGR---TQSGYSPMPQLEEIIRKNQ 138 (147)
T ss_dssp CCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC---EEESCCCTTHHHHHHHHTS
T ss_pred cHHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE---EeeCCCCHHHHHHHHHHHH
Confidence 12346789999999999988 6784 4779999999999998765
No 309
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=98.51 E-value=3.1e-07 Score=63.89 Aligned_cols=69 Identities=9% Similarity=0.091 Sum_probs=51.9
Q ss_pred EEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCc-----cc----HHHHHhCCCccccEEEEEeCCeEEEEeeCCC
Q 021976 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-----LE----KDLAKEYNILAYPTLYLFVAGVRQFQFFGER 147 (304)
Q Consensus 77 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~-----~~----~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~ 147 (304)
++.|+++||++|++..+.++++. +.+-.+|++ ++ +++.+.+++.++|++++ +|+ ..|..
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~----~i~G~ 81 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDK----HVLGY 81 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTE----EEESC
T ss_pred EEEEECCCChHHHHHHHHHHHcC------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCE----EEeCC
Confidence 66799999999999998887753 334456655 33 56678899999999977 773 23446
Q ss_pred CHHHHHHHHH
Q 021976 148 TRDVISAWVR 157 (304)
Q Consensus 148 ~~~~l~~~i~ 157 (304)
+.+.|.+++.
T Consensus 82 ~~~~l~~~l~ 91 (92)
T 3ic4_A 82 NEEKLKELIR 91 (92)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHhc
Confidence 8899998875
No 310
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.51 E-value=7e-07 Score=70.02 Aligned_cols=81 Identities=15% Similarity=0.144 Sum_probs=61.6
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHh--hCCcEEEEEeCcc----------------------------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKML--KGEADLVMVDAYL---------------------------------- 115 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~~~vd~~~---------------------------------- 115 (304)
+++++++.|+..||++|+.+.|.+.++.+++ .+++.+...+..-
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~lf~~~ 105 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFDKEKESLQRGNVMHHYIDYSAPEQALSALHKMFATQ 105 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECCCCSTTTHHHHHHHTTCCTTCHHHHHHHHHHHHHTH
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHcC
Confidence 4678999999999999999999999998888 5556655544310
Q ss_pred --------------------------------cHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHHH
Q 021976 116 --------------------------------EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVR 157 (304)
Q Consensus 116 --------------------------------~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~ 157 (304)
+.++++++||.++||+++ +|+ .+.|..+.+.|.+.|.
T Consensus 106 ~~~~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~a~~~gv~gtPt~vv--ng~---~~~G~~~~~~l~~~i~ 174 (175)
T 1z6m_A 106 DEWGNLTLEEVATYAEKNLGLKEQKDATLVSAVIAEANAAHIQFVPTIII--GEY---IFDESVTEEELRGYIE 174 (175)
T ss_dssp HHHTTSCHHHHHHHHHHTSCCCCCCCHHHHHHHHHHHHHHTCCSSCEEEE--TTE---EECTTCCHHHHHHHHT
T ss_pred hhhccCCHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHcCCCCcCeEEE--CCE---EccCCCCHHHHHHHhc
Confidence 112456789999999765 885 4579889988888764
No 311
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.50 E-value=1.2e-06 Score=64.62 Aligned_cols=97 Identities=15% Similarity=0.122 Sum_probs=72.7
Q ss_pred CCceecCCHHHHHHhhcc----CCeEEEEEecCCCCccHH---HHHHHhccCCceeEEEe---cCHHHHhhcCCCCCCCC
Q 021976 162 LGTYSITTTDEAERILTV----ESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKR 231 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~~----~~~~~v~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~ 231 (304)
..+..+.+.+++++.+.. +++++|.|+.+||.++.. .+..++....++.|..+ .+++++++|++.. .
T Consensus 16 ~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~---~ 92 (124)
T 1xfl_A 16 GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQA---M 92 (124)
T ss_dssp SCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCSSEEEEEEETTTSHHHHHHTTCCS---S
T ss_pred CcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHHcCCCc---c
Confidence 457778888888887764 778999999999987543 34455433336766654 5778999999997 9
Q ss_pred CeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 232 P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
|++++++.+. ....+.| .+.++|.+||.+.
T Consensus 93 Pt~~~~~~G~-~~~~~~G-~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 93 PTFMFLKEGK-ILDKVVG-AKKDELQSTIAKH 122 (124)
T ss_dssp SEEEEEETTE-EEEEEES-CCHHHHHHHHHHH
T ss_pred CEEEEEECCE-EEEEEeC-CCHHHHHHHHHHh
Confidence 9999996553 4456778 5889999999763
No 312
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=98.48 E-value=4e-07 Score=65.15 Aligned_cols=67 Identities=22% Similarity=0.363 Sum_probs=49.9
Q ss_pred hcHHHHhcCCCcEEEEEEc-----CCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHH----HHHhCCCccccEEEEE
Q 021976 64 KNFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEYNILAYPTLYLF 134 (304)
Q Consensus 64 ~~~~~~~~~~~~~lv~f~a-----~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v~~~Pt~~~~ 134 (304)
+.++++++.++ ++| |++ +||++|++..+.+.+. ++.+..+|+++++. +.+.+|+.++|++ |
T Consensus 8 ~~~~~~i~~~~-vvv-f~~g~~~~~~C~~C~~~~~~L~~~------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v--~ 77 (105)
T 2yan_A 8 ERLKVLTNKAS-VML-FMKGNKQEAKCGFSKQILEILNST------GVEYETFDILEDEEVRQGLKAYSNWPTYPQL--Y 77 (105)
T ss_dssp HHHHHHHTSSS-EEE-EESBCSSSBCTTHHHHHHHHHHHH------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEE--E
T ss_pred HHHHHHhccCC-EEE-EEecCCCCCCCccHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHHHCCCCCCeE--E
Confidence 45667776554 444 777 9999999999988775 36788899988766 4556799999998 4
Q ss_pred eCCeEE
Q 021976 135 VAGVRQ 140 (304)
Q Consensus 135 ~~g~~~ 140 (304)
.+|+.+
T Consensus 78 i~g~~i 83 (105)
T 2yan_A 78 VKGELV 83 (105)
T ss_dssp ETTEEE
T ss_pred ECCEEE
Confidence 488543
No 313
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.47 E-value=1.4e-06 Score=62.08 Aligned_cols=95 Identities=12% Similarity=0.165 Sum_probs=69.7
Q ss_pred ceecCCHHHHHHhh-ccCCeEEEEEecCCCCccHH---HHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEE
Q 021976 164 TYSITTTDEAERIL-TVESKLVLGFLHDLEGMESE---ELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (304)
Q Consensus 164 ~~~l~~~~~~~~~~-~~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv 235 (304)
+..+ +.+++++.. ++++++++.|+++||+++.. .+.+++ .+.+++.+..+ .+++++++|++.+ .|+++
T Consensus 3 v~~l-~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~~ 78 (107)
T 1dby_A 3 AGAV-NDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRS---IPTIM 78 (107)
T ss_dssp CEEE-CHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCS---SCEEE
T ss_pred cEec-cHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCc---CCEEE
Confidence 3445 456666644 56778999999999987543 344554 35556777654 5778999999996 99999
Q ss_pred EEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 236 FLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
+++.+ .....+.|..+.+++.+||.+.
T Consensus 79 ~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 105 (107)
T 1dby_A 79 VFKGG-KKCETIIGAVPKATIVQTVEKY 105 (107)
T ss_dssp EESSS-SEEEEEESCCCHHHHHHHHHHH
T ss_pred EEeCC-EEEEEEeCCCCHHHHHHHHHHH
Confidence 99644 3556788999999999999753
No 314
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.47 E-value=6e-07 Score=67.94 Aligned_cols=104 Identities=9% Similarity=0.065 Sum_probs=63.9
Q ss_pred CceecCCHHHHHHhhccCCeEEEEEecCC--CCc---cHHHHHHHh-ccCCcee--EEEe---cCHHHHhhcCCCCCCCC
Q 021976 163 GTYSITTTDEAERILTVESKLVLGFLHDL--EGM---ESEELAAAS-KLHSDVN--FYQT---TSADVAEFFHIHPKSKR 231 (304)
Q Consensus 163 ~~~~l~~~~~~~~~~~~~~~~~v~f~~~~--~~~---~~~~~~~~a-~~~~~~~--f~~~---~~~~l~~~~~i~~~~~~ 231 (304)
.+..+++ +++++++.+.+.++|.|+.+| |++ ....+.+++ ++ +++. |+.+ .+++++++|+|.+ +
T Consensus 18 ~~~~l~~-~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~~la~~~~V~~---i 92 (142)
T 2es7_A 18 GWQPVEA-STVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSEAIGDRFNVRR---F 92 (142)
T ss_dssp TCEECCC-C--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHHHHHHTTTCCS---S
T ss_pred cCccccc-ccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCHHHHHhcCCCc---C
Confidence 5667755 778888877777777777666 554 566677766 45 7777 7765 5678999999997 9
Q ss_pred CeEEEEecCCCceecccCCCCHHHHHHHHhcCCCCcEEeeC
Q 021976 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHPLVVTLT 272 (304)
Q Consensus 232 P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p~~~~l~ 272 (304)
|++++|+.|. ....+.|..+.++|.+||.+..-+.....+
T Consensus 93 PT~~~fk~G~-~v~~~~G~~~~~~l~~~i~~~l~~~~~~~~ 132 (142)
T 2es7_A 93 PATLVFTDGK-LRGALSGIHPWAELLTLMRSIVDTPAAQET 132 (142)
T ss_dssp SEEEEESCC-----CEESCCCHHHHHHHHHHHHC-------
T ss_pred CeEEEEeCCE-EEEEEeCCCCHHHHHHHHHHHhcccccCCC
Confidence 9999996553 567788999999999999976554444443
No 315
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.47 E-value=8.6e-07 Score=62.60 Aligned_cols=91 Identities=13% Similarity=0.139 Sum_probs=68.3
Q ss_pred CHHHHHHhhccCCeEEEEEecCCCCccHH---HHHHHhccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEEEEecCCC
Q 021976 169 TTDEAERILTVESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAG 242 (304)
Q Consensus 169 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv~~~~~~~ 242 (304)
+.+++++.+++++++++.|+.+||.++.. .+..++....++.+..+ .+++++++|++.+ .|++++++.+ .
T Consensus 5 ~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~~~~~~g-~ 80 (104)
T 2e0q_A 5 DSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQVGFGKLNSDENPDIAARYGVMS---LPTVIFFKDG-E 80 (104)
T ss_dssp CTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCS---SCEEEEEETT-E
T ss_pred CHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCCceEEEEECCCCHHHHHhCCccc---cCEEEEEECC-e
Confidence 34567777777889999999999987543 34455432223776654 5778999999996 9999999644 3
Q ss_pred ceecccCCCCHHHHHHHHhcC
Q 021976 243 KATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 243 ~~~~y~g~~~~~~i~~fi~~~ 263 (304)
....+.|..+.+++.+|+.+.
T Consensus 81 ~~~~~~g~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 81 PVDEIIGAVPREEIEIRIKNL 101 (104)
T ss_dssp EEEEEESCCCHHHHHHHHHHH
T ss_pred EhhhccCCCCHHHHHHHHHHH
Confidence 556788999999999999853
No 316
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.44 E-value=1.6e-06 Score=66.11 Aligned_cols=96 Identities=22% Similarity=0.285 Sum_probs=73.3
Q ss_pred ceecCCHHHHHHhh--ccCCeEEEEEecCCCCccHH---HHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeE
Q 021976 164 TYSITTTDEAERIL--TVESKLVLGFLHDLEGMESE---ELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (304)
Q Consensus 164 ~~~l~~~~~~~~~~--~~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~l 234 (304)
+..+.+.++++..+ +++++++|.|+++||+++.. .+.+++ .+.+++.|..+ .+++++++|++.+ +|++
T Consensus 5 l~~i~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~---~Pt~ 81 (149)
T 3gix_A 5 LPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISY---IPST 81 (149)
T ss_dssp CCEECSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCS---SSEE
T ss_pred eeecCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCc---cCeE
Confidence 45567888888887 45789999999999998544 455555 45555777654 6778999999997 9999
Q ss_pred EEEecCCCce---------ecccC-CCCHHHHHHHHhcC
Q 021976 235 IFLHLEAGKA---------TPFRH-QFTRLAIANFVTHT 263 (304)
Q Consensus 235 v~~~~~~~~~---------~~y~g-~~~~~~i~~fi~~~ 263 (304)
++++++. .. ..+.| ..+.++|.++|++.
T Consensus 82 ~~~~~G~-~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 82 VFFFNGQ-HMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp EEEETTE-EEEEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred EEEECCe-EEEeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 9888663 33 46778 78889999998853
No 317
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.44 E-value=1.5e-06 Score=63.20 Aligned_cols=94 Identities=14% Similarity=0.184 Sum_probs=71.0
Q ss_pred ceecCCHHHHHHhhc--cCCeEEEEEecCCCCccHHH---HHHHhccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEE
Q 021976 164 TYSITTTDEAERILT--VESKLVLGFLHDLEGMESEE---LAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (304)
Q Consensus 164 ~~~l~~~~~~~~~~~--~~~~~~v~f~~~~~~~~~~~---~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv 235 (304)
+..+++.+++++.+. .+++++|.|+++||.++... +..++... ++.+..+ .+++++++|++.+ .|+++
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~---~Pt~~ 90 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY-DAIFVKVDVDKLEETARKYNISA---MPTFI 90 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS-SSEEEEEETTTSHHHHHHTTCCS---SSEEE
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc-CcEEEEEECCccHHHHHHcCCCc---cceEE
Confidence 677877788888887 57789999999999885444 44454322 5666644 5778999999997 99999
Q ss_pred EEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 236 FLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
+++.+. ....+.| .+.+.|.+||++.
T Consensus 91 ~~~~G~-~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 91 AIKNGE-KVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp EEETTE-EEEEEES-SCHHHHHHHHHHH
T ss_pred EEeCCc-EEEEEeC-CCHHHHHHHHHHh
Confidence 997553 5566778 6889999999753
No 318
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.44 E-value=1.6e-06 Score=63.13 Aligned_cols=95 Identities=9% Similarity=0.057 Sum_probs=70.3
Q ss_pred CceecCCHHHHHHhhccCCeEEEEEecCCCCccHHH---HHHHh-ccCCceeEEEec-------CHHHHhhcCCCCCCCC
Q 021976 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGMESEE---LAAAS-KLHSDVNFYQTT-------SADVAEFFHIHPKSKR 231 (304)
Q Consensus 163 ~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~---~~~~a-~~~~~~~f~~~~-------~~~l~~~~~i~~~~~~ 231 (304)
.+..+ +.+++...+.++++++|.|+++||+++.+. +..++ ....++.+..+. .++++++|++.+ .
T Consensus 13 ~~~~~-~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~---~ 88 (118)
T 1zma_A 13 DLEVT-TVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPT---V 88 (118)
T ss_dssp TSEEC-CHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCS---S
T ss_pred hhhcC-CHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCC---C
Confidence 44444 678888888888899999999999985443 44444 344455555332 247889999997 9
Q ss_pred CeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 232 P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
|++++++.+. ....+.|..+.++|.+||.+
T Consensus 89 Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~k 118 (118)
T 1zma_A 89 PGFVHITDGQ-INVRCDSSMSAQEIKDFAGL 118 (118)
T ss_dssp CEEEEEETTE-EEEECCTTCCHHHHHHHHTC
T ss_pred CeEEEEECCE-EEEEecCCCCHHHHHHHhhC
Confidence 9999997553 55778899999999999863
No 319
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=98.43 E-value=1.3e-06 Score=68.89 Aligned_cols=87 Identities=13% Similarity=0.122 Sum_probs=67.6
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCc-------------------------------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------------------------------------- 114 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~------------------------------------- 114 (304)
.+++++|.|+.-.||+|++++|.+.++.+++.+++.+..+...
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~~~~~~~~~~~~~~~~~ 99 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSFMGGNMGQAMSKAYATMIALEVEDKMVPVMFNRIHTL 99 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEECSSSSGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEecCCCCCchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999998876666554320
Q ss_pred --------------------------------------ccHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHH
Q 021976 115 --------------------------------------LEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWV 156 (304)
Q Consensus 115 --------------------------------------~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i 156 (304)
.+...++++||+|+||+++ ||+.+....|..+.+++.+.|
T Consensus 100 ~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~gv~gTPtfiI--NGky~v~~~~~~s~e~~~~~i 177 (184)
T 4dvc_A 100 RKPPKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVHRFDKQFQDSGLTGVPAVVV--NNRYLVQGQSAKSLDEYFDLV 177 (184)
T ss_dssp CCCCSSHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEECGGGCSSHHHHHHHH
T ss_pred hhccchHHHHHHHHHHhCCCHHHHHHHHhCHHHHHHHHHHHHHHHHcCCCcCCEEEE--CCEEeeCCcCCCCHHHHHHHH
Confidence 0113577899999999877 887666666778888888887
Q ss_pred HHHh
Q 021976 157 REKM 160 (304)
Q Consensus 157 ~~~~ 160 (304)
..++
T Consensus 178 ~~Ll 181 (184)
T 4dvc_A 178 NYLL 181 (184)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 7655
No 320
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.43 E-value=1.5e-06 Score=61.53 Aligned_cols=93 Identities=10% Similarity=0.237 Sum_probs=67.4
Q ss_pred eecCCHHHHHH-hhccCCeEEEEEecCCCCccHH---HHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEEE
Q 021976 165 YSITTTDEAER-ILTVESKLVLGFLHDLEGMESE---ELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIF 236 (304)
Q Consensus 165 ~~l~~~~~~~~-~~~~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv~ 236 (304)
..++. +++++ ..++++++++.|+++||.++.. .+..++ .+.+++.+..+ .+++++++|++.+ .|++++
T Consensus 3 ~~~~~-~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~~~ 78 (105)
T 1fb6_A 3 QDVND-SSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRS---IPTVLF 78 (105)
T ss_dssp EECCT-TTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCS---SSEEEE
T ss_pred eechh-hhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCc---ccEEEE
Confidence 34433 45555 4455778999999999987533 344544 45556776654 5778999999996 999999
Q ss_pred EecCCCceecccCCCCHHHHHHHHhc
Q 021976 237 LHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 237 ~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
++.+ .....+.|..+.+.+.+||++
T Consensus 79 ~~~g-~~~~~~~G~~~~~~l~~~l~~ 103 (105)
T 1fb6_A 79 FKNG-ERKESIIGAVPKSTLTDSIEK 103 (105)
T ss_dssp EETT-EEEEEEEECCCHHHHHHHHHH
T ss_pred EeCC-eEEEEEecCCCHHHHHHHHHh
Confidence 9754 355667888899999999975
No 321
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=98.43 E-value=2.7e-06 Score=63.51 Aligned_cols=100 Identities=14% Similarity=0.156 Sum_probs=73.8
Q ss_pred CCCceecCCHHHHHHhhcc--CCeEEEEEecCCCCccHHHH------HHHhccCCceeEEEe-------cCHHHHhhcCC
Q 021976 161 TLGTYSITTTDEAERILTV--ESKLVLGFLHDLEGMESEEL------AAASKLHSDVNFYQT-------TSADVAEFFHI 225 (304)
Q Consensus 161 ~~~~~~l~~~~~~~~~~~~--~~~~~v~f~~~~~~~~~~~~------~~~a~~~~~~~f~~~-------~~~~l~~~~~i 225 (304)
.+....+.+.++++..+.+ +++++|.|+.+||.++.+.. ..++....++.+..+ .+.+++++|++
T Consensus 10 ~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~~~l~~~~~v 89 (134)
T 2fwh_A 10 HLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNV 89 (134)
T ss_dssp CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECTTCCHHHHHHHHHTTC
T ss_pred CCCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCCCCcchHHHHHHHcCC
Confidence 3556668888888877754 67899999999999875543 334432234666543 24679999999
Q ss_pred CCCCCCCeEEEEecCCCce--ecccCCCCHHHHHHHHhcC
Q 021976 226 HPKSKRPALIFLHLEAGKA--TPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 226 ~~~~~~P~lv~~~~~~~~~--~~y~g~~~~~~i~~fi~~~ 263 (304)
.+ +|+++++..++... ..+.|..+.++|.+++.+.
T Consensus 90 ~~---~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 90 LG---LPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp CS---SSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC
T ss_pred CC---CCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhc
Confidence 97 99999996555343 5789999999999999853
No 322
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.43 E-value=1.3e-06 Score=62.89 Aligned_cols=97 Identities=16% Similarity=0.152 Sum_probs=71.9
Q ss_pred CCceecCCHHHHHHhhcc----CCeEEEEEecCCCCccHHH---HHHHhccCCceeEEEe---cCHHHHhhcCCCCCCCC
Q 021976 162 LGTYSITTTDEAERILTV----ESKLVLGFLHDLEGMESEE---LAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKR 231 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~~----~~~~~v~f~~~~~~~~~~~---~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~ 231 (304)
..+..+.+.+++++.+.. +++++|.|+.+||.++... +..++....++.|..+ .+++++++|++.. .
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~---~ 80 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPNVTFLKVDVDELKAVAEEWNVEA---M 80 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCSSEEEEEEETTTCHHHHHHHHCSS---T
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCCCcEEEEEEccccHHHHHhCCCCc---c
Confidence 456778888888888865 7789999999999875433 4445433346776654 5778999999996 9
Q ss_pred CeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 232 P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
|++++++.+. ....+.| .+.+.|.+||.+.
T Consensus 81 Pt~~~~~~G~-~~~~~~g-~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 81 PTFIFLKDGK-LVDKTVG-ADKDGLPTLVAKH 110 (113)
T ss_dssp TEEEEEETTE-EEEEEEC-CCTTHHHHHHHHH
T ss_pred cEEEEEeCCE-EEEEEec-CCHHHHHHHHHHh
Confidence 9999997543 4456677 5888999998753
No 323
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=98.42 E-value=1e-06 Score=64.43 Aligned_cols=97 Identities=8% Similarity=0.122 Sum_probs=69.7
Q ss_pred CceecCCHHHHHH-hhccCC--eEEEEEecCCCCcc---HHHHHHHhccCCceeEEEecCHHHHhhcCCCCCCCCCeEEE
Q 021976 163 GTYSITTTDEAER-ILTVES--KLVLGFLHDLEGME---SEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALIF 236 (304)
Q Consensus 163 ~~~~l~~~~~~~~-~~~~~~--~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~~~~~l~~~~~i~~~~~~P~lv~ 236 (304)
.+.++++ +++.+ ..++.. .++|.|+++||+++ ...+.++|....++.|..+.-.+..++|++.+ .|++++
T Consensus 4 ~v~~it~-~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~v~f~kvd~d~~~~~~~v~~---~PT~~~ 79 (118)
T 3evi_A 4 ELREISG-NQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPETKFVKAIVNSCIQHYHDNC---LPTIFV 79 (118)
T ss_dssp SCEECCG-GGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTTSEEEEEEGGGTSTTCCGGG---CSEEEE
T ss_pred ceEEeCH-HHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCCCEEEEEEhHHhHHHCCCCC---CCEEEE
Confidence 4566744 44544 444443 78999999999874 45566677555678898876666689999997 999999
Q ss_pred EecCCCceecccC-------CCCHHHHHHHHhcCC
Q 021976 237 LHLEAGKATPFRH-------QFTRLAIANFVTHTK 264 (304)
Q Consensus 237 ~~~~~~~~~~y~g-------~~~~~~i~~fi~~~~ 264 (304)
|+++. ....+.| .++.++|..|+.++.
T Consensus 80 fk~G~-~v~~~~G~~~~gg~~~~~~~le~~L~~~g 113 (118)
T 3evi_A 80 YKNGQ-IEAKFIGIIECGGINLKLEELEWKLAEVG 113 (118)
T ss_dssp EETTE-EEEEEESTTTTTCSSCCHHHHHHHHHTTT
T ss_pred EECCE-EEEEEeChhhhCCCCCCHHHHHHHHHHcC
Confidence 99875 3334433 368899999998754
No 324
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.40 E-value=2.4e-06 Score=61.97 Aligned_cols=98 Identities=15% Similarity=0.161 Sum_probs=73.0
Q ss_pred CCCceecCCHHHHHHhhcc----CCeEEEEEecCCCCccHH---HHHHHhccCCceeEEEe---cCHHHHhhcCCCCCCC
Q 021976 161 TLGTYSITTTDEAERILTV----ESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSK 230 (304)
Q Consensus 161 ~~~~~~l~~~~~~~~~~~~----~~~~~v~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~ 230 (304)
+..+..+.+.+++++.+.. +++++|.|+.+||.++.. .+..++....++.|..+ .++++++.|++..
T Consensus 5 ~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~--- 81 (118)
T 2vm1_A 5 EGAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPGAIFLKVDVDELKDVAEAYNVEA--- 81 (118)
T ss_dssp CCCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCS---
T ss_pred CCceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCCCcEEEEEEcccCHHHHHHcCCCc---
Confidence 3457778888899888765 778999999999987543 34455433335666644 5778999999997
Q ss_pred CCeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 231 RPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 231 ~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
.|++++++.+. ....+.| .+.+.|.+||.+.
T Consensus 82 ~Pt~~~~~~g~-~~~~~~g-~~~~~l~~~l~~~ 112 (118)
T 2vm1_A 82 MPTFLFIKDGE-KVDSVVG-GRKDDIHTKIVAL 112 (118)
T ss_dssp BSEEEEEETTE-EEEEEES-CCHHHHHHHHHHH
T ss_pred CcEEEEEeCCe-EEEEecC-CCHHHHHHHHHHH
Confidence 99999997553 4456777 5889999999864
No 325
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=98.40 E-value=4.7e-07 Score=62.61 Aligned_cols=56 Identities=11% Similarity=0.325 Sum_probs=45.2
Q ss_pred EEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCc--ccHHHHHhC-CCccccEEEEEeCCeE
Q 021976 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY--LEKDLAKEY-NILAYPTLYLFVAGVR 139 (304)
Q Consensus 76 ~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~-~v~~~Pt~~~~~~g~~ 139 (304)
.++.|+++||++|++..+.+++. ++.+..+|++ ..+++.+.+ ++.++|+++ .+|+.
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~------~i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~--~~g~~ 65 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK------GVKYTDIDASTSLRQEMVQRANGRNTFPQIF--IGDYH 65 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH------TCCEEEECSCHHHHHHHHHHHHSSCCSCEEE--ETTEE
T ss_pred eEEEEECCCChhHHHHHHHHHHc------CCCcEEEECCHHHHHHHHHHhCCCCCcCEEE--ECCEE
Confidence 46779999999999999888764 3667888888 556788889 999999984 37743
No 326
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.40 E-value=2.3e-06 Score=64.04 Aligned_cols=96 Identities=15% Similarity=0.239 Sum_probs=70.5
Q ss_pred CceecCCHHHHHHhhc------------cCCeEEEEEecCCCCccHH---HHHHHh-ccCCceeEEEe---cCHHHHhhc
Q 021976 163 GTYSITTTDEAERILT------------VESKLVLGFLHDLEGMESE---ELAAAS-KLHSDVNFYQT---TSADVAEFF 223 (304)
Q Consensus 163 ~~~~l~~~~~~~~~~~------------~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~~~~~f~~~---~~~~l~~~~ 223 (304)
.+..+ +.+++.+.+. .+++++|.|+++||.++.+ .+.+++ .+.+++.|..+ .+++++++|
T Consensus 10 ~v~~l-~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~ 88 (136)
T 2l5l_A 10 KVIHL-TKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAF 88 (136)
T ss_dssp SEEEE-CHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHT
T ss_pred ceEEe-cchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHc
Confidence 45555 4466666554 3568999999999988543 345554 45556777754 577899999
Q ss_pred CCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 224 HIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 224 ~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
++.. +|++++|..++ +...+.|..+.+.|.+||.+.
T Consensus 89 ~v~~---~Pt~~~~~~~G-~~~~~~G~~~~~~l~~~l~~~ 124 (136)
T 2l5l_A 89 GIRS---IPSILFIPMEG-KPEMAQGAMPKASFKKAIDEF 124 (136)
T ss_dssp TCCS---SCEEEEECSSS-CCEEEESCCCHHHHHHHHHHH
T ss_pred CCCC---CCEEEEECCCC-cEEEEeCCCCHHHHHHHHHHH
Confidence 9997 99999995444 344788999999999999865
No 327
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.40 E-value=2.5e-06 Score=62.35 Aligned_cols=97 Identities=13% Similarity=0.159 Sum_probs=71.4
Q ss_pred CCceecCCHHHHHHhhcc----CCeEEEEEecCCCCccHH---HHHHHhccCCceeEEEe---cCHHHHhhcCCCCCCCC
Q 021976 162 LGTYSITTTDEAERILTV----ESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKR 231 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~~----~~~~~v~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~ 231 (304)
.+...+.+.++++..+.. +++++|.|+.+||.++.. .+..++....++.|..+ .+++++++|++.+ .
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~---~ 88 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPNAVFLKVDVDELKPIAEQFSVEA---M 88 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCS---S
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHcCCCc---c
Confidence 445556677888877754 778999999999987543 34555533333666654 5788999999997 9
Q ss_pred CeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 232 P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
|++++++.+. ....+.|.. .+.|.+||.+.
T Consensus 89 Pt~~~~~~G~-~~~~~~G~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 89 PTFLFMKEGD-VKDRVVGAI-KEELTAKVGLH 118 (122)
T ss_dssp SEEEEEETTE-EEEEEESSC-HHHHHHHHHHH
T ss_pred cEEEEEeCCE-EEEEEeCcC-HHHHHHHHHHH
Confidence 9999996553 456788887 99999999864
No 328
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=98.39 E-value=7e-07 Score=70.83 Aligned_cols=84 Identities=14% Similarity=0.141 Sum_probs=64.4
Q ss_pred CCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCc--------------------c-----------------
Q 021976 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY--------------------L----------------- 115 (304)
Q Consensus 73 ~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~--------------------~----------------- 115 (304)
+++++|.|++-||++|+++.|.+.++.+.+ ++.|..+... .
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~--~v~~~~~p~~~~~~~~~aa~a~~Aa~~q~g~~~~~~~~~~lf~a~~~~ 99 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA--GTDIGKMHITFNQSAHIASMFYYAAEMQVDGAPDHAFMEDLFAATQMG 99 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH--TSCCEEEECCSSSHHHHHHHHHHHHHTTSSSSCCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh--CCeEEEEeccCCccchHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHh
Confidence 578999999999999999999999999988 3444444420 0
Q ss_pred -----------------------------------------cHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHH
Q 021976 116 -----------------------------------------EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISA 154 (304)
Q Consensus 116 -----------------------------------------~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~ 154 (304)
+...++++||+|+||+++ +|+......|..+.+.+.+
T Consensus 100 ~~~~~~~~~~~L~~~a~~~Gl~d~~~~~~~~~~~~~~~v~~~~~~a~~~gv~GtPtfvv--ng~~~v~~~Ga~~~e~~~~ 177 (185)
T 3feu_A 100 EGTTLTEQQEAYSKAFTSRGLVSPYDFNEEQRDTLIKKVDNAKMLSEKSGISSVPTFVV--NGKYNVLIGGHDDPKQIAD 177 (185)
T ss_dssp TTSCHHHHHHHHHHHHHTTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEECGGGCSSHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCEEEE--CCEEEEecCCCCCHHHHHH
Confidence 001345678999999987 8866666789999999988
Q ss_pred HHHHHh
Q 021976 155 WVREKM 160 (304)
Q Consensus 155 ~i~~~~ 160 (304)
.|...+
T Consensus 178 ~i~~ll 183 (185)
T 3feu_A 178 TIRYLL 183 (185)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887665
No 329
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.39 E-value=5.3e-07 Score=66.87 Aligned_cols=88 Identities=10% Similarity=0.144 Sum_probs=67.0
Q ss_pred HHHHhhccCCeEEEEEecCCCCccHHH---HHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEEEEecCCCce
Q 021976 172 EAERILTVESKLVLGFLHDLEGMESEE---LAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKA 244 (304)
Q Consensus 172 ~~~~~~~~~~~~~v~f~~~~~~~~~~~---~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~ 244 (304)
.++....++++++|.|+.+||+++.+. +.+++ .+.+++.+..+ .+++++++|++.+ +|++++++.+ +..
T Consensus 34 ~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~---~Pt~~~~~~G-~~~ 109 (128)
T 3ul3_B 34 IINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKS---LPTIILLKNK-TML 109 (128)
T ss_dssp SSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCS---SSEEEEEETT-EEE
T ss_pred HHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCC---cCEEEEEECC-EEE
Confidence 344555567899999999999885443 44444 34456776654 6789999999997 9999999644 466
Q ss_pred ecccCCCCHHHHHHHHhcC
Q 021976 245 TPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 245 ~~y~g~~~~~~i~~fi~~~ 263 (304)
..+.|..+.++|.+||+++
T Consensus 110 ~~~~G~~~~~~l~~~l~~~ 128 (128)
T 3ul3_B 110 ARKDHFVSSNDLIALIKKH 128 (128)
T ss_dssp EEESSCCCHHHHHHHHTTC
T ss_pred EEecCCCCHHHHHHHHHhC
Confidence 7788999999999999864
No 330
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.39 E-value=1.1e-07 Score=76.36 Aligned_cols=45 Identities=9% Similarity=0.176 Sum_probs=41.2
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHH---HHHHHHhhCCcEEEEEeCccc
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAYLE 116 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~vd~~~~ 116 (304)
.+++++|.||+.||+||+.+.|.+ +++++.+++++.|.+++.+.+
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~ 159 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFM 159 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcC
Confidence 357899999999999999999999 999999988899999999765
No 331
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=98.39 E-value=1.5e-06 Score=60.38 Aligned_cols=75 Identities=16% Similarity=0.249 Sum_probs=56.2
Q ss_pred EEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhC-----CCccccEEEEEeCCeEEEEeeCCCCHH
Q 021976 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEY-----NILAYPTLYLFVAGVRQFQFFGERTRD 150 (304)
Q Consensus 76 ~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~-----~v~~~Pt~~~~~~g~~~~~~~g~~~~~ 150 (304)
.++.|..+||++|++....+++ .++.|-.+|++++++..+.+ |.+.+|++++ .+|... +..+.+
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~------~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i-~Dg~~l----~~~~~~ 73 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTA------NRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKF-ADGSTL----TNPSAD 73 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHH------TTCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEE-TTSCEE----ESCCHH
T ss_pred cEEEEcCCCCHhHHHHHHHHHh------cCCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEE-eCCEEE----eCCCHH
Confidence 4677999999999998877654 26888899999887654432 7889999854 566432 235788
Q ss_pred HHHHHHHHHhC
Q 021976 151 VISAWVREKMT 161 (304)
Q Consensus 151 ~l~~~i~~~~~ 161 (304)
++.++|.+..+
T Consensus 74 el~~~L~el~g 84 (92)
T 2lqo_A 74 EVKAKLVKIAG 84 (92)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcC
Confidence 99999988765
No 332
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=98.39 E-value=2.3e-06 Score=69.48 Aligned_cols=86 Identities=16% Similarity=0.178 Sum_probs=65.7
Q ss_pred CCCcEEEEEEcCC-Chhhh-----hhHHHHHHHHHHhhCCcEEEEEeCc----------------------c-cHHHHHh
Q 021976 72 KNRNVMVMFYANW-CYWSK-----KLAPEFAAAAKMLKGEADLVMVDAY----------------------L-EKDLAKE 122 (304)
Q Consensus 72 ~~~~~lv~f~a~w-C~~C~-----~~~~~~~~~~~~~~~~~~~~~vd~~----------------------~-~~~~~~~ 122 (304)
.+++++|+||++| |++|. .+.+.+.+. + .++.++.|+.+ . +..+++.
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~-~gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLsD~~~~~vak~ 122 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W-PHLKLIVITVDSPSSLARARHEHGLPNIALLSTLRGRDFHKR 122 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C-TTSEEEEEESSCHHHHHHHHHHHCCTTCEEEESTTCTTHHHH
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c-CCCEEEEEECCCHHHHHHHHHHcCCCCceEEEcCCchHHHHH
Confidence 5788999999999 99999 888887776 4 46778877753 2 3578899
Q ss_pred CCCcc---------ccEEEEEe-CCeEEEEee-----CCCCHHHHHHHHHHHhC
Q 021976 123 YNILA---------YPTLYLFV-AGVRQFQFF-----GERTRDVISAWVREKMT 161 (304)
Q Consensus 123 ~~v~~---------~Pt~~~~~-~g~~~~~~~-----g~~~~~~l~~~i~~~~~ 161 (304)
||+.. .|++++++ +|++...+. +..+.+++.+.++....
T Consensus 123 yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~~ 176 (224)
T 3keb_A 123 YGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEGEQ 176 (224)
T ss_dssp TTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHHH
T ss_pred hCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhhh
Confidence 99875 79999997 887766543 34667888888876653
No 333
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.38 E-value=4.1e-06 Score=62.53 Aligned_cols=97 Identities=19% Similarity=0.201 Sum_probs=72.3
Q ss_pred CceecCCHHHHHHhhccCCeEEEEEecCCCCcc---HHHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEE
Q 021976 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (304)
Q Consensus 163 ~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv 235 (304)
-+.++ +.+++++.+++..++++.|+++ |+++ ...+.++| ++++++.|+.+ .++++++.||+++ ...|+++
T Consensus 7 lv~~~-t~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~-~~iPtl~ 83 (133)
T 2djk_A 7 LIGEI-GPETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKT-DKFPAFA 83 (133)
T ss_dssp CSEEC-CHHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCS-SSSSEEE
T ss_pred ceecc-ChHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCc-ccCCEEE
Confidence 34555 5577777777777888888888 6653 45677777 67788999876 4667999999983 2489999
Q ss_pred EEecCCCceeccc--CCCCHHHHHHHHhc
Q 021976 236 FLHLEAGKATPFR--HQFTRLAIANFVTH 262 (304)
Q Consensus 236 ~~~~~~~~~~~y~--g~~~~~~i~~fi~~ 262 (304)
+|+..+++...+. |..+.+.|.+||.+
T Consensus 84 i~~~~~g~~~~~~~~g~~~~~~l~~fi~~ 112 (133)
T 2djk_A 84 IQEVAKNQKFPFDQEKEITFEAIKAFVDD 112 (133)
T ss_dssp EECTTTCCBCCCCSSSCCCHHHHHHHHHH
T ss_pred EEecCcCcccCCCCccccCHHHHHHHHHH
Confidence 9986333445655 89999999999985
No 334
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=98.38 E-value=7.6e-07 Score=70.86 Aligned_cols=41 Identities=15% Similarity=0.270 Sum_probs=35.0
Q ss_pred CCcEEEEEEcCCChhhhhhHHHH---HHHHHHhhCCcEEEEEeC
Q 021976 73 NRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDA 113 (304)
Q Consensus 73 ~~~~lv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~vd~ 113 (304)
+++++|.||+.||++|+++.|.+ .++.+.+.+++.|..++.
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 57 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHV 57 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEEC
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEec
Confidence 46899999999999999999987 688888877777777774
No 335
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.38 E-value=2.6e-06 Score=67.84 Aligned_cols=42 Identities=12% Similarity=0.178 Sum_probs=35.2
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeC
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA 113 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~ 113 (304)
+++++++.|+..|||+|..+.|.+.++.+++++++.+..+..
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCCceEEEEeCc
Confidence 356799999999999999999999999998876676655543
No 336
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=98.37 E-value=9.5e-06 Score=61.64 Aligned_cols=109 Identities=12% Similarity=0.174 Sum_probs=84.2
Q ss_pred CCcEEcChhcHHHHhcCCCcEEEEEEcC-CChhhhhhHHHHHHHHHHhhCCcEEEEEeC--cccHHHHHhCCCcc--ccE
Q 021976 56 KDVVSLNGKNFSEFMGKNRNVMVMFYAN-WCYWSKKLAPEFAAAAKMLKGEADLVMVDA--YLEKDLAKEYNILA--YPT 130 (304)
Q Consensus 56 ~~v~~l~~~~~~~~~~~~~~~lv~f~a~-wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~--~~~~~~~~~~~v~~--~Pt 130 (304)
+-|.++|.++..++..++-+..+.++.. .-..-..+.+.+.++|+.+++++.|+.+|. +++....+.||+.. .|+
T Consensus 14 PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl~~~~~P~ 93 (147)
T 3bj5_A 14 PLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGLKKEECPA 93 (147)
T ss_dssp -CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTCCGGGCSE
T ss_pred CeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCCCcccCCE
Confidence 4688999999998887776665554443 333356678999999999999999999999 66777889999986 899
Q ss_pred EEEEeC-Ce-EEEEee-CCCCHHHHHHHHHHHhCCCc
Q 021976 131 LYLFVA-GV-RQFQFF-GERTRDVISAWVREKMTLGT 164 (304)
Q Consensus 131 ~~~~~~-g~-~~~~~~-g~~~~~~l~~~i~~~~~~~~ 164 (304)
+.++.. +. ....+. +..+.+.|.+|+++.+...+
T Consensus 94 v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL 130 (147)
T 3bj5_A 94 VRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKI 130 (147)
T ss_dssp EEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCS
T ss_pred EEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCc
Confidence 999874 31 222333 78899999999999987665
No 337
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=98.35 E-value=2e-06 Score=58.18 Aligned_cols=67 Identities=9% Similarity=0.146 Sum_probs=48.3
Q ss_pred EEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccH----HHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHH
Q 021976 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEK----DLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVI 152 (304)
Q Consensus 77 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~----~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l 152 (304)
++.|+++||++|++..+.+++. ++.+..+|+++++ ++.+.+|+.++|+++ .+|+.+. | .+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~--~~g~~i~---g---~~~i 68 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK------GVSFQELPIDGNAAKREEMIKRSGRTTVPQIF--IDAQHIG---G---YDDL 68 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------TCCCEEEECTTCSHHHHHHHHHHSSCCSCEEE--ETTEEEE---S---HHHH
T ss_pred EEEEECCCChhHHHHHHHHHHC------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCEEEe---C---HHHH
Confidence 5679999999999999888764 3567777777653 356788999999984 4885432 2 2456
Q ss_pred HHHHH
Q 021976 153 SAWVR 157 (304)
Q Consensus 153 ~~~i~ 157 (304)
.++++
T Consensus 69 ~~~~~ 73 (82)
T 1fov_A 69 YALDA 73 (82)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 338
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.35 E-value=2.6e-05 Score=71.90 Aligned_cols=179 Identities=12% Similarity=0.036 Sum_probs=120.1
Q ss_pred cHHHHhcC-CCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhCCCccccEEEEEeCCe-EEEE
Q 021976 65 NFSEFMGK-NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGV-RQFQ 142 (304)
Q Consensus 65 ~~~~~~~~-~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~-~~~~ 142 (304)
++...+++ .+++-+.++.+.|..|+++...++++++.-+ ++.+...| ... ...|++.+.++|+ .-.+
T Consensus 9 ~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~s~-~i~~~~~~--~~~--------~~~p~~~~~~~~~~~~i~ 77 (521)
T 1hyu_A 9 QLRAYLEKLTKPVELIATLDDSAKSAEIKELLAEIAELSD-KVTFKEDN--TLP--------VRKPSFLITNPGSQQGPR 77 (521)
T ss_dssp HHHHHHTTCCSCEEEEEECCSSHHHHHHHHHHHHHHTTCT-TEEEEECT--TSS--------SCSSEEEEECTTCCCSCE
T ss_pred HHHHHHHhCCCCEEEEEEeCCCcchHHHHHHHHHHHHhCC-ceEEEEcC--Ccc--------cCCCEEEEecCCCcceEE
Confidence 34444432 3566666677779999999999999887654 66653322 110 5689999987663 4578
Q ss_pred eeCCCCHHHHHHHHHHHhC--CCceecCCHHHHHHhhcc-CCeEEEEEecCCCCccHH---HHHHHhccCCceeEEEe--
Q 021976 143 FFGERTRDVISAWVREKMT--LGTYSITTTDEAERILTV-ESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT-- 214 (304)
Q Consensus 143 ~~g~~~~~~l~~~i~~~~~--~~~~~l~~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~-- 214 (304)
|.|...-.++..++...+. .....+ +.+.++.+.+. .+..++.|+.+||.++.. .+..++....++.+..+
T Consensus 78 f~g~p~g~e~~s~~~~l~~~~~~~~~~-~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~~v~~~~vd~ 156 (521)
T 1hyu_A 78 FAGSPLGHEFTSLVLALLWTGGHPSKE-AQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDG 156 (521)
T ss_dssp EESCCCGGGHHHHHHHHHHHTTCCCCS-CHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCTTEEEEEEET
T ss_pred EeccCcchhHHHHHHHHHhhcCCCCCC-CHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcCceEEEEEec
Confidence 8887777777777766532 222333 45555555433 455677788999998644 35555544457777653
Q ss_pred -cCHHHHhhcCCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 215 -TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 215 -~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
..++++++|++.+ .|++++ ++ +. ...|..+.+.|.+|+...
T Consensus 157 ~~~~~~~~~~~i~s---vPt~~i--~g--~~-~~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 157 GTFQNEITERNVMG---VPAVFV--NG--KE-FGQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp TTCHHHHHHTTCCS---SSEEEE--TT--EE-EEESCCCHHHHHHHHCCS
T ss_pred hhhHHHHHHhCCCc---cCEEEE--CC--EE-EecCCCCHHHHHHHHhhc
Confidence 6789999999997 999876 22 33 244888999999999765
No 339
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=98.33 E-value=1.4e-06 Score=61.60 Aligned_cols=60 Identities=5% Similarity=0.075 Sum_probs=45.7
Q ss_pred CCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHHhC-----CCccccEEEEEeCCeEE
Q 021976 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEY-----NILAYPTLYLFVAGVRQ 140 (304)
Q Consensus 73 ~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~-----~v~~~Pt~~~~~~g~~~ 140 (304)
.+.-++.|+++||++|++..+.+++. ++.+..+|++.+++..+.+ |..++|++ |.+|+.+
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~------~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~i--fi~g~~i 78 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRK------GVEFQEYCIDGDNEAREAMAARANGKRSLPQI--FIDDQHI 78 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHH------TCCCEEEECTTCHHHHHHHHHHTTTCCCSCEE--EETTEEE
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHC------CCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEE--EECCEEE
Confidence 34567779999999999999988764 3667788888876654444 89999988 4488543
No 340
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=98.32 E-value=2.6e-06 Score=60.58 Aligned_cols=73 Identities=15% Similarity=0.206 Sum_probs=50.5
Q ss_pred CCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCccc-----HHHH----HhCCCccccEEEEEeCCeEEEEe
Q 021976 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE-----KDLA----KEYNILAYPTLYLFVAGVRQFQF 143 (304)
Q Consensus 73 ~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~-----~~~~----~~~~v~~~Pt~~~~~~g~~~~~~ 143 (304)
++..++.|+++||++|++..+.+++.. +.+-.+|++.. +++. +..|+.++|++++ +|. ++
T Consensus 20 ~~~~v~ly~~~~Cp~C~~ak~~L~~~~------i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i--~~~---~~ 88 (103)
T 3nzn_A 20 DRGKVIMYGLSTCVWCKKTKKLLTDLG------VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII--NDE---KA 88 (103)
T ss_dssp CCSCEEEEECSSCHHHHHHHHHHHHHT------BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--TTT---EE
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcC------CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--CCC---EE
Confidence 344577799999999999999888753 44555666541 2332 3468999999876 331 35
Q ss_pred eCCCCHHHHHHHH
Q 021976 144 FGERTRDVISAWV 156 (304)
Q Consensus 144 ~g~~~~~~l~~~i 156 (304)
.|..+.+.|.++|
T Consensus 89 igg~~~~~l~~~L 101 (103)
T 3nzn_A 89 IVGFKEKEIRESL 101 (103)
T ss_dssp EESCCHHHHHHHT
T ss_pred EEcCCHHHHHHHh
Confidence 5677888888765
No 341
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.31 E-value=3.1e-06 Score=61.73 Aligned_cols=101 Identities=19% Similarity=0.227 Sum_probs=71.6
Q ss_pred CCceecC-CHHHHH-HhhccCCeEEEEEecCCCCccHH---HHHHHhccCCceeEEEe---cCHHHHhhcCCCCCCCCCe
Q 021976 162 LGTYSIT-TTDEAE-RILTVESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPA 233 (304)
Q Consensus 162 ~~~~~l~-~~~~~~-~~~~~~~~~~v~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~ 233 (304)
+.+..+. +.+++. .+.+++++++|.|+.+||.++.. .+..++....++.|..+ .+++++++|++.+ .|+
T Consensus 3 ~~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~i~~---~Pt 79 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEANKDVTFIKVDVDKNGNAADAYGVSS---IPA 79 (118)
T ss_dssp CCSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCS---SSE
T ss_pred CcceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCeEEEEEECCCCHHHHHhcCCCC---CCE
Confidence 4566776 778887 45556788999999999988543 34455532266777754 5788999999997 999
Q ss_pred EEEEecC---CCceecccCCCCHHHHHHHHhcCCCC
Q 021976 234 LIFLHLE---AGKATPFRHQFTRLAIANFVTHTKHP 266 (304)
Q Consensus 234 lv~~~~~---~~~~~~y~g~~~~~~i~~fi~~~~~p 266 (304)
+++|+.+ +.....+.|.. .++|...+.++..|
T Consensus 80 ~~~~~~~~~~G~~~~~~~G~~-~~~l~~~~~~~~~~ 114 (118)
T 2f51_A 80 LFFVKKEGNEIKTLDQFVGAD-VSRIKADIEKFKHH 114 (118)
T ss_dssp EEEEEEETTEEEEEEEEESCC-HHHHHHHHHHHC--
T ss_pred EEEEeCCCCcceEEEeecCCC-HHHHHHHHHHhhhc
Confidence 9999861 22445677754 56699999876544
No 342
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=98.30 E-value=3.4e-06 Score=65.86 Aligned_cols=82 Identities=10% Similarity=0.107 Sum_probs=59.7
Q ss_pred cHHHHhcCCCcEEEEEEcCCChhhhh-hHHHHHHHHHHhhC-Cc-EEEEEeCcc-----------------------cHH
Q 021976 65 NFSEFMGKNRNVMVMFYANWCYWSKK-LAPEFAAAAKMLKG-EA-DLVMVDAYL-----------------------EKD 118 (304)
Q Consensus 65 ~~~~~~~~~~~~lv~f~a~wC~~C~~-~~~~~~~~~~~~~~-~~-~~~~vd~~~-----------------------~~~ 118 (304)
++.+.+.+++.+|+.||+.||+.|.. +.|.|.+.+++++. ++ .++.|..+. +.+
T Consensus 40 sLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~~~~~~~f~~~~~l~~~f~lLsD~~~~ 119 (176)
T 4f82_A 40 SVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLHTAGKVRMMADGSAA 119 (176)
T ss_dssp EHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTCH
T ss_pred eHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHhCCCCCceEEEcCchH
Confidence 34454444456788889999999999 99999999999975 67 788887642 345
Q ss_pred HHHhCCCc-----------cccEEEEEeCCeEEEEeeCC
Q 021976 119 LAKEYNIL-----------AYPTLYLFVAGVRQFQFFGE 146 (304)
Q Consensus 119 ~~~~~~v~-----------~~Pt~~~~~~g~~~~~~~g~ 146 (304)
+++.||+. ..|+.+++++|++...+.++
T Consensus 120 va~ayGv~~~~~~~G~g~~s~R~tfII~dG~I~~~~~~~ 158 (176)
T 4f82_A 120 FTHALGLTQDLSARGMGIRSLRYAMVIDGGVVKTLAVEA 158 (176)
T ss_dssp HHHHHTCEEECGGGTCCEEECCEEEEEETTEEEEEEECC
T ss_pred HHHHhCCCccccccCCCcccccEEEEEcCCEEEEEEEcC
Confidence 78888873 24656666999777666543
No 343
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=98.30 E-value=1e-06 Score=63.90 Aligned_cols=68 Identities=16% Similarity=0.332 Sum_probs=46.9
Q ss_pred hcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCccc----HH----HHHhCCCccccEEEEEe
Q 021976 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE----KD----LAKEYNILAYPTLYLFV 135 (304)
Q Consensus 64 ~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~----~~----~~~~~~v~~~Pt~~~~~ 135 (304)
+.+++.+..++ ++.|+++||++|++..+.+++. ++.+..+|++.. ++ +.+..|+..+|++ |.
T Consensus 10 ~~~~~~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~------~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i--fi 79 (113)
T 3rhb_A 10 ESIRKTVTENT--VVIYSKTWCSYCTEVKTLFKRL------GVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNV--FV 79 (113)
T ss_dssp HHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHHT------TCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE--EE
T ss_pred HHHHHHHhcCC--EEEEECCCChhHHHHHHHHHHc------CCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEE--EE
Confidence 34555665555 6669999999999999988764 344556666542 22 4455799999998 45
Q ss_pred CCeEEE
Q 021976 136 AGVRQF 141 (304)
Q Consensus 136 ~g~~~~ 141 (304)
+|+.+.
T Consensus 80 ~g~~ig 85 (113)
T 3rhb_A 80 CGKHIG 85 (113)
T ss_dssp TTEEEE
T ss_pred CCEEEc
Confidence 885443
No 344
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.30 E-value=3.6e-06 Score=63.26 Aligned_cols=95 Identities=9% Similarity=0.102 Sum_probs=61.8
Q ss_pred ceecCCHHHHHHhhccCCeEEEEEecCCCCcc---HHHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEEE
Q 021976 164 TYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIF 236 (304)
Q Consensus 164 ~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv~ 236 (304)
+..+ +.+++...+..++.++|.|+.+||.+. ...+..++ .+.+++.|..+ .++++++.|++.+ +|++++
T Consensus 35 v~~l-~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~~ 110 (140)
T 1v98_A 35 VVEA-DEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRS---VPTLVL 110 (140)
T ss_dssp ---------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCS---SSEEEE
T ss_pred cccC-CHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCCCc---cCEEEE
Confidence 4445 345566665555558889999999874 34455555 45556777755 5778999999996 999999
Q ss_pred EecCCCceecccCCCCHHHHHHHHhcC
Q 021976 237 LHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 237 ~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
|+.+. ....+.|..+.+.|.+||.+.
T Consensus 111 ~~~G~-~~~~~~G~~~~~~l~~~i~~~ 136 (140)
T 1v98_A 111 FRRGA-PVATWVGASPRRVLEERLRPY 136 (140)
T ss_dssp EETTE-EEEEEESCCCHHHHHHHHHHH
T ss_pred EeCCc-EEEEEeCCCCHHHHHHHHHHH
Confidence 97543 456788999999999999863
No 345
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.30 E-value=2.9e-06 Score=62.47 Aligned_cols=87 Identities=17% Similarity=0.146 Sum_probs=66.7
Q ss_pred hhccCCeEEEEEecCCCCccHHH---HHHHh-ccCCceeEEEec-----CHHHHhhcCCCCCCCCCeEEEEecCCCceec
Q 021976 176 ILTVESKLVLGFLHDLEGMESEE---LAAAS-KLHSDVNFYQTT-----SADVAEFFHIHPKSKRPALIFLHLEAGKATP 246 (304)
Q Consensus 176 ~~~~~~~~~v~f~~~~~~~~~~~---~~~~a-~~~~~~~f~~~~-----~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~ 246 (304)
....+++++|.|+.+||.++... +.+++ .+..++.+..+. +.+++++|++.+ .|+++++++++.....
T Consensus 22 ~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~---~Pt~~~~~~~G~~~~~ 98 (126)
T 2l57_A 22 EAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANI---VPTTVFLDKEGNKFYV 98 (126)
T ss_dssp TCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCS---SSEEEEECTTCCEEEE
T ss_pred HHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcc---eeEEEEECCCCCEEEE
Confidence 34456789999999999885443 44444 344667776554 678999999996 9999999966656677
Q ss_pred ccCCCCHHHHHHHHhcCCC
Q 021976 247 FRHQFTRLAIANFVTHTKH 265 (304)
Q Consensus 247 y~g~~~~~~i~~fi~~~~~ 265 (304)
+.|..+.++|.+||++...
T Consensus 99 ~~G~~~~~~l~~~l~~~~~ 117 (126)
T 2l57_A 99 HQGLMRKNNIETILNSLGV 117 (126)
T ss_dssp EESCCCHHHHHHHHHHHCC
T ss_pred ecCCCCHHHHHHHHHHHhc
Confidence 8899999999999997543
No 346
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.30 E-value=3.6e-06 Score=63.10 Aligned_cols=98 Identities=14% Similarity=0.140 Sum_probs=73.2
Q ss_pred CCCceecCCHHHHHHhhc----cCCeEEEEEecCCCCccHH---HHHHHhccCCceeEEEe---cCHHHHhhcCCCCCCC
Q 021976 161 TLGTYSITTTDEAERILT----VESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSK 230 (304)
Q Consensus 161 ~~~~~~l~~~~~~~~~~~----~~~~~~v~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~ 230 (304)
+..+..+.+.+++++.+. .+++++|.|+.+||.++.. .+..++....++.|..+ .+++++++|++.+
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~v~~~~~~~~~~~~~v~~--- 99 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKA--- 99 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCE---
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCcccHHHHHHcCCCc---
Confidence 345777888888887774 4778999999999998543 34445433355666654 6788999999997
Q ss_pred CCeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 231 RPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 231 ~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
.|++++++.+ .....+.|. +.++|.+||.+.
T Consensus 100 ~Pt~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~ 130 (139)
T 3d22_A 100 TPTFFFLRDG-QQVDKLVGA-NKPELHKKITAI 130 (139)
T ss_dssp ESEEEEEETT-EEEEEEESC-CHHHHHHHHHHH
T ss_pred ccEEEEEcCC-eEEEEEeCC-CHHHHHHHHHHH
Confidence 9999999654 355667787 889999999864
No 347
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=98.27 E-value=1.8e-06 Score=59.39 Aligned_cols=74 Identities=14% Similarity=0.177 Sum_probs=52.3
Q ss_pred EEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCccc----HHHHHhCCC-----ccccEEEEEeCCeEEEEeeCC
Q 021976 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE----KDLAKEYNI-----LAYPTLYLFVAGVRQFQFFGE 146 (304)
Q Consensus 76 ~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~----~~~~~~~~v-----~~~Pt~~~~~~g~~~~~~~g~ 146 (304)
.++.|+++||++|++....+++.. -.+.+..+|.+++ .++.+.+|. .++|++++ +|+.+ |
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~~----i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~~i----~- 73 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEENN----IAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDEHI----G- 73 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTT----CCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTEEE----E-
T ss_pred EEEEEEcCCChhHHHHHHHHHHcC----CCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCEEE----e-
Confidence 477899999999999988776543 2455666666555 457777888 99999965 88533 3
Q ss_pred CCHHHHHHHHHHHhC
Q 021976 147 RTRDVISAWVREKMT 161 (304)
Q Consensus 147 ~~~~~l~~~i~~~~~ 161 (304)
..+++.+++++..+
T Consensus 74 -g~~~i~~~~~~~~~ 87 (89)
T 3msz_A 74 -GFTELKANADKILN 87 (89)
T ss_dssp -SHHHHHHTHHHHTT
T ss_pred -ChHHHHHHHHHHhc
Confidence 34667777766543
No 348
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.26 E-value=4.7e-06 Score=70.69 Aligned_cols=98 Identities=10% Similarity=0.145 Sum_probs=75.6
Q ss_pred CCceecCCHHHHHHhhcc--CCeEEEEEecCCCCcc---HHHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCC
Q 021976 162 LGTYSITTTDEAERILTV--ESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRP 232 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~~--~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P 232 (304)
+.+..++. +++++.+.. +++++|.|+.+||+++ ...+..++ .+.+++.|..+ .+++++++|+|.+ +|
T Consensus 7 ~~v~~~~~-~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~---~P 82 (287)
T 3qou_A 7 ENIVNINE-SNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRA---IP 82 (287)
T ss_dssp TTEEECCT-TTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCS---SS
T ss_pred CccEECCH-HHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCC---CC
Confidence 45667744 677777754 6789999999999984 44566665 45566777654 6789999999997 99
Q ss_pred eEEEEecCCCceecccCCCCHHHHHHHHhcCC
Q 021976 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (304)
Q Consensus 233 ~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 264 (304)
++++|+.+ .....+.|..+.+.+..|+....
T Consensus 83 t~~~~~~G-~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 83 TVYLFQNG-QPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp EEEEEETT-EEEEEEESCCCHHHHHHHHHHHS
T ss_pred eEEEEECC-EEEEEeeCCCCHHHHHHHHHHHc
Confidence 99999755 35557889999999999998764
No 349
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.26 E-value=8.7e-07 Score=66.48 Aligned_cols=96 Identities=14% Similarity=0.139 Sum_probs=69.7
Q ss_pred CceecCCHHHHHHhhccCC--eEEEEEecCCCCcc---HHHHHHHh-ccCC-ceeEEEe---cCHHHHhhcCCC------
Q 021976 163 GTYSITTTDEAERILTVES--KLVLGFLHDLEGME---SEELAAAS-KLHS-DVNFYQT---TSADVAEFFHIH------ 226 (304)
Q Consensus 163 ~~~~l~~~~~~~~~~~~~~--~~~v~f~~~~~~~~---~~~~~~~a-~~~~-~~~f~~~---~~~~l~~~~~i~------ 226 (304)
.+..++ .+++++.+..++ +++|.|+++||.++ ...+.+++ .+.+ ++.|..+ .+++++++|++.
T Consensus 8 ~v~~l~-~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~~ 86 (137)
T 2dj0_A 8 YIKYFN-DKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTK 86 (137)
T ss_dssp CCEECC-TTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSSS
T ss_pred eEEEcc-HhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCcC
Confidence 455664 466777666544 78999999999873 55566665 4543 6777765 678899999997
Q ss_pred CCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 227 PKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 227 ~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
. +|++++|+.+. ....+.|..+.+.|.+|+.++
T Consensus 87 ~---~Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 87 Q---LPTLILFQGGK-EAMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp C---SSEEEEESSSS-EEEEESCBCSSSCBCCCCCCH
T ss_pred C---CCEEEEEECCE-EEEEecCcCchHHHHHHHhcc
Confidence 6 99999996553 556788888777777777643
No 350
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.25 E-value=4.2e-06 Score=68.28 Aligned_cols=96 Identities=13% Similarity=0.210 Sum_probs=72.8
Q ss_pred ceecCCHHHHHH-hhccCCeEEEEEecCCCCccHH---HHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEE
Q 021976 164 TYSITTTDEAER-ILTVESKLVLGFLHDLEGMESE---ELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (304)
Q Consensus 164 ~~~l~~~~~~~~-~~~~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv 235 (304)
+..+ +.+++++ +++++++++|.|+.+||.++.. .+..++ .+.+++.|..+ .+++++++|++.+ +|+++
T Consensus 14 ~~~l-t~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~---~Pt~~ 89 (222)
T 3dxb_A 14 IIHL-TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRG---IPTLL 89 (222)
T ss_dssp CEEC-CTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCS---BSEEE
T ss_pred ceeC-CHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCc---CCEEE
Confidence 4455 4456655 6777889999999999987543 455555 45556777654 6778999999997 99999
Q ss_pred EEecCCCceecccCCCCHHHHHHHHhcCC
Q 021976 236 FLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (304)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 264 (304)
+++.+. ....+.|..+.+.|.+||.+..
T Consensus 90 ~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 117 (222)
T 3dxb_A 90 LFKNGE-VAATKVGALSKGQLKEFLDANL 117 (222)
T ss_dssp EEETTE-EEEEEESCCCHHHHHHHHHHHS
T ss_pred EEECCe-EEEEeccccChHHHHHHHHhhc
Confidence 998553 5568889999999999999754
No 351
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.25 E-value=1.2e-05 Score=62.97 Aligned_cols=90 Identities=9% Similarity=0.068 Sum_probs=70.9
Q ss_pred cCCCcEEEEEEcCCChhhhhhHHHH---HHHHHHhhCCcEEEEEeCcccH---------------HHH---HhCCCcccc
Q 021976 71 GKNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAYLEK---------------DLA---KEYNILAYP 129 (304)
Q Consensus 71 ~~~~~~lv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~vd~~~~~---------------~~~---~~~~v~~~P 129 (304)
++.|..+|+++++||..|..+.... +++.+.++.++.+...|.+... .++ +.+++.++|
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~P 132 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFP 132 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTCS
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCCC
Confidence 3578999999999999999987433 4566666668889999988654 344 348999999
Q ss_pred EEEEEe-C---CeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 130 TLYLFV-A---GVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 130 t~~~~~-~---g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
++.++. . ++.+.+..|..+.+++.+.+.+..
T Consensus 133 ~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~ 167 (178)
T 2ec4_A 133 LFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAM 167 (178)
T ss_dssp EEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHH
T ss_pred eEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHH
Confidence 999995 2 256788999999999998887654
No 352
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=98.24 E-value=2.2e-06 Score=59.45 Aligned_cols=57 Identities=14% Similarity=0.319 Sum_probs=43.6
Q ss_pred EEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHH----HHHhCCCccccEEEEEeCCeEE
Q 021976 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEYNILAYPTLYLFVAGVRQ 140 (304)
Q Consensus 76 ~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v~~~Pt~~~~~~g~~~ 140 (304)
.++.|+++||++|++..+.+++. ++.+..+|+++++. +.+.+++.++|++ +.+|+.+
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~------~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~~i 67 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK------GAEFNEIDASATPELRAEMQERSGRNTFPQI--FIGSVHV 67 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT------TCCCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTEEE
T ss_pred cEEEEECCCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCEEE
Confidence 46789999999999998888763 46678888887654 4457899999975 4588543
No 353
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.23 E-value=6.3e-06 Score=62.25 Aligned_cols=96 Identities=10% Similarity=0.187 Sum_probs=68.8
Q ss_pred ceecCCHHHHHHhhc--cCCeEEEEEecCCCCcc---HHHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeE
Q 021976 164 TYSITTTDEAERILT--VESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (304)
Q Consensus 164 ~~~l~~~~~~~~~~~--~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~l 234 (304)
+..+.+.++++..+. ++++++|.|+.+||+++ ...+.+++ .+.+++.|..+ .+++++++|++.+ .|++
T Consensus 5 l~~i~~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~---~Pt~ 81 (142)
T 1qgv_A 5 LPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYD---PCTV 81 (142)
T ss_dssp SCBCCSHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCS---SCEE
T ss_pred HhccCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCC---CCEE
Confidence 456778888886553 47889999999999985 34455555 45566777754 5678999999997 9999
Q ss_pred EEEecCCCcee--------cccCCCC-HHHHHHHHhc
Q 021976 235 IFLHLEAGKAT--------PFRHQFT-RLAIANFVTH 262 (304)
Q Consensus 235 v~~~~~~~~~~--------~y~g~~~-~~~i~~fi~~ 262 (304)
++|+++..... ...|..+ .+++.++|++
T Consensus 82 ~~~~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~ 118 (142)
T 1qgv_A 82 MFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIET 118 (142)
T ss_dssp EEEETTEEEEEECC------CCSCCSCHHHHHHHHHH
T ss_pred EEEECCcEEEEecCCCCcceeeeecCcHHHHHHHHHH
Confidence 99986642221 3455554 7888888875
No 354
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.23 E-value=2.8e-06 Score=61.95 Aligned_cols=97 Identities=12% Similarity=0.145 Sum_probs=69.2
Q ss_pred CCceecCCHHHHHHhh-ccCCeEEEEEecCCCCccH---HHHHHHh-ccCC-----ceeEEEe--cCHHHHhhcCCCCCC
Q 021976 162 LGTYSITTTDEAERIL-TVESKLVLGFLHDLEGMES---EELAAAS-KLHS-----DVNFYQT--TSADVAEFFHIHPKS 229 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~-~~~~~~~v~f~~~~~~~~~---~~~~~~a-~~~~-----~~~f~~~--~~~~l~~~~~i~~~~ 229 (304)
..+..++. ++++..+ .++++++|.|+.+||.++. ..+.+++ .+.+ ++.|..+ ....+++ ++.+
T Consensus 7 ~~v~~l~~-~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~--~v~~-- 81 (121)
T 2djj_A 7 GPVTVVVA-KNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPD--EIQG-- 81 (121)
T ss_dssp CSSEECCT-TTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCSS--CCSS--
T ss_pred CCeEEecc-cCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccccccc--ccCc--
Confidence 34566643 5666664 5678899999999999853 3455554 3443 6777754 2223555 8886
Q ss_pred CCCeEEEEecCCCc-eecccCCCCHHHHHHHHhcCC
Q 021976 230 KRPALIFLHLEAGK-ATPFRHQFTRLAIANFVTHTK 264 (304)
Q Consensus 230 ~~P~lv~~~~~~~~-~~~y~g~~~~~~i~~fi~~~~ 264 (304)
+|++++|+.++.. ...|.|..+.++|.+||.++.
T Consensus 82 -~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~ 116 (121)
T 2djj_A 82 -FPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENG 116 (121)
T ss_dssp -SSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTS
T ss_pred -CCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhcc
Confidence 9999999887642 778999999999999999764
No 355
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=98.20 E-value=6.8e-06 Score=61.29 Aligned_cols=97 Identities=9% Similarity=0.032 Sum_probs=69.3
Q ss_pred CceecCCHHHHHHhhccC--CeEEEEEecCCCCccHHHHHHHhccCC--ceeEEEe---cCHHHHhhcCCCCCCCCCeEE
Q 021976 163 GTYSITTTDEAERILTVE--SKLVLGFLHDLEGMESEELAAASKLHS--DVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (304)
Q Consensus 163 ~~~~l~~~~~~~~~~~~~--~~~~v~f~~~~~~~~~~~~~~~a~~~~--~~~f~~~---~~~~l~~~~~i~~~~~~P~lv 235 (304)
.+..+++.++++..+.+. ++++|.|+.+||.++.........+.. ++.|..+ .+++++++|++.+ +|+++
T Consensus 21 ~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~~ 97 (133)
T 3cxg_A 21 IYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYYYVTLVDIDVDIHPKLNDQHNIKA---LPTFE 97 (133)
T ss_dssp EEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTEECEEEEEETTTCHHHHHHTTCCS---SSEEE
T ss_pred cEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCEEEEEEeccchHHHHHhcCCCC---CCEEE
Confidence 466777778888888653 589999999999986554433332222 3455543 5778999999997 99999
Q ss_pred EEe--cCCC-ceecccCCCCHHHHHHHHhcC
Q 021976 236 FLH--LEAG-KATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 236 ~~~--~~~~-~~~~y~g~~~~~~i~~fi~~~ 263 (304)
+|+ ++.+ ....+.|. +.++|.++|.+.
T Consensus 98 ~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~ 127 (133)
T 3cxg_A 98 FYFNLNNEWVLVHTVEGA-NQNDIEKAFQKY 127 (133)
T ss_dssp EEEEETTEEEEEEEEESC-CHHHHHHHHHHH
T ss_pred EEEecCCCeEEEEEEcCC-CHHHHHHHHHHH
Confidence 996 4421 34567787 889999999864
No 356
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=98.18 E-value=2.3e-05 Score=63.16 Aligned_cols=88 Identities=22% Similarity=0.280 Sum_probs=67.7
Q ss_pred CCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc----------------------------cHHHHH
Q 021976 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~ 121 (304)
.++.+++.|| +.||+.|..+.+.+.+...++++ ++.++.|.++. +.++++
T Consensus 51 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~vak 130 (216)
T 3sbc_A 51 KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLSR 130 (216)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHHHH
Confidence 5788999999 99999999999999999999976 78888888752 346889
Q ss_pred hCCCc------cccEEEEEe-CCeEEEE--ee--CCCCHHHHHHHHHHH
Q 021976 122 EYNIL------AYPTLYLFV-AGVRQFQ--FF--GERTRDVISAWVREK 159 (304)
Q Consensus 122 ~~~v~------~~Pt~~~~~-~g~~~~~--~~--g~~~~~~l~~~i~~~ 159 (304)
.||+- ..+.+++++ +|++... |. -.++.+++.+.++..
T Consensus 131 ~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~Al 179 (216)
T 3sbc_A 131 DYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAF 179 (216)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHHh
Confidence 99973 356788887 7855432 22 247888888777643
No 357
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.16 E-value=6.4e-06 Score=61.56 Aligned_cols=97 Identities=13% Similarity=0.009 Sum_probs=71.0
Q ss_pred CCceecCCHHHHHHhhccCCeEEEEEecCCCCccHHH---HHHHhccCCceeEE---E---------ecCHHHHhhcCCC
Q 021976 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEE---LAAASKLHSDVNFY---Q---------TTSADVAEFFHIH 226 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~---~~~~a~~~~~~~f~---~---------~~~~~l~~~~~i~ 226 (304)
..+..+ +.+++++.+++ +++|.|+++||+++... +..++.... +.|. . ..+++++++|++.
T Consensus 16 ~~v~~l-~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~ 91 (135)
T 3emx_A 16 GRLIYI-TPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD-VPIVMFIWGSLIGERELSAARLEMNKAGVE 91 (135)
T ss_dssp TEEEEC-CHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC-SCEEEEEECTTCCHHHHHHHHHHHHHHTCC
T ss_pred Cceeec-CHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC-CEEEEEECCCchhhhhhhhhHHHHHHcCCc
Confidence 345566 66788888866 89999999999986554 444443222 4444 3 3467899999999
Q ss_pred CCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhcCCCC
Q 021976 227 PKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHP 266 (304)
Q Consensus 227 ~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p 266 (304)
+ +|++++++.+ +....+.|..+.+.+..++++..-+
T Consensus 92 ~---~Pt~~~~~~G-~~v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 92 G---TPTLVFYKEG-RIVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp S---SSEEEEEETT-EEEEEEESCCCHHHHHHHHHHHC--
T ss_pred e---eCeEEEEcCC-EEEEEEeCCCCHHHHHHHHHHHhCC
Confidence 7 9999999944 3667888999999999999976544
No 358
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.14 E-value=9.4e-06 Score=60.68 Aligned_cols=98 Identities=10% Similarity=0.078 Sum_probs=70.2
Q ss_pred CCceecCCHHHHHHhhccC---CeEEEEEecCCCCcc---HHHHHHHhccCCceeEEEecCHHHHhhcCCCCCCCCCeEE
Q 021976 162 LGTYSITTTDEAERILTVE---SKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALI 235 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~~~---~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~~~~~l~~~~~i~~~~~~P~lv 235 (304)
..+..+ +.+++.+.+... ..++|.|+++||.++ ...+..++....++.|..+.-.+..++|++.. +|+++
T Consensus 10 g~v~~i-~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~v~~~~vd~~~~~~~~~i~~---~Pt~~ 85 (135)
T 2dbc_A 10 GELREI-SGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPETKFVKAIVNSCIEHYHDNC---LPTIF 85 (135)
T ss_dssp CSCEEC-CHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSSEEEEEECCSSSCSSCCSSC---CSEEE
T ss_pred CceEEc-CHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCcEEEEEEhhcCcccCCCCC---CCEEE
Confidence 346677 778888776542 478999999999885 34455565444568888765444458999997 99999
Q ss_pred EEecCCCceecccCC-------CCHHHHHHHHhcCC
Q 021976 236 FLHLEAGKATPFRHQ-------FTRLAIANFVTHTK 264 (304)
Q Consensus 236 ~~~~~~~~~~~y~g~-------~~~~~i~~fi~~~~ 264 (304)
+|+.+. ....+.|. ++.+.|.+|+.++.
T Consensus 86 ~~~~G~-~v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 86 VYKNGQ-IEGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp EESSSS-CSEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred EEECCE-EEEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 998554 44455554 37899999999764
No 359
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.14 E-value=7.7e-06 Score=66.46 Aligned_cols=98 Identities=13% Similarity=0.152 Sum_probs=72.4
Q ss_pred CceecCCHHHHHHhhccC---CeEEEEEecCCCCcc---HHHHHHHhccCCceeEEEe--cCHHHHhhcCCCCCCCCCeE
Q 021976 163 GTYSITTTDEAERILTVE---SKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT--TSADVAEFFHIHPKSKRPAL 234 (304)
Q Consensus 163 ~~~~l~~~~~~~~~~~~~---~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~--~~~~l~~~~~i~~~~~~P~l 234 (304)
.+..+.+.+++...+.+. ..++|.|+.+||+++ ...+..++....++.|..+ .++++++.|++.+ +|++
T Consensus 100 ~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~~v~f~~vd~~~~~l~~~~~i~~---~PTl 176 (217)
T 2trc_P 100 FVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPMVKFCKIRASNTGAGDRFSSDV---LPTL 176 (217)
T ss_dssp SEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCTTSEEEEEEHHHHTCSTTSCGGG---CSEE
T ss_pred eEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEEECCcHHHHHHCCCCC---CCEE
Confidence 356776778888777543 689999999999985 4445666654457777754 3567889999997 9999
Q ss_pred EEEecCCCceecccCCCC-------HHHHHHHHhcCC
Q 021976 235 IFLHLEAGKATPFRHQFT-------RLAIANFVTHTK 264 (304)
Q Consensus 235 v~~~~~~~~~~~y~g~~~-------~~~i~~fi~~~~ 264 (304)
++|+.+. ....+.|..+ .+.|..||.++.
T Consensus 177 ~~~~~G~-~v~~~~G~~~~~g~~~~~~~Le~~L~~~g 212 (217)
T 2trc_P 177 LVYKGGE-LISNFISVAEQFAEDFFAADVESFLNEYG 212 (217)
T ss_dssp EEEETTE-EEEEETTGGGGSCSSCCHHHHHHHHHTTT
T ss_pred EEEECCE-EEEEEeCCcccCcccCCHHHHHHHHHHcC
Confidence 9998553 4456666544 489999999764
No 360
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.13 E-value=2.4e-06 Score=63.56 Aligned_cols=101 Identities=9% Similarity=0.132 Sum_probs=71.2
Q ss_pred CCceecCCHHHHHHhhc-cCCeEEEEEecCCCCccHH---HHHHHh-ccC--CceeEEEe---cCHHHHhhcCCCCCCCC
Q 021976 162 LGTYSITTTDEAERILT-VESKLVLGFLHDLEGMESE---ELAAAS-KLH--SDVNFYQT---TSADVAEFFHIHPKSKR 231 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~--~~~~f~~~---~~~~l~~~~~i~~~~~~ 231 (304)
..+..++. ++++..+. .+.+++|.|+.+||.++.. .+..++ .+. .++.|..+ .++.++++|++.+ +
T Consensus 7 ~~v~~l~~-~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~---~ 82 (133)
T 2dj3_A 7 GPVKVVVG-KTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEG---F 82 (133)
T ss_dssp CSSEECCT-TTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSS---S
T ss_pred CceEEEcC-CCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCc---C
Confidence 34556643 55555554 4778999999999998533 344554 343 46777755 4567888999997 9
Q ss_pred CeEEEEecCCC-ceeccc-CCCCHHHHHHHHhcCCCC
Q 021976 232 PALIFLHLEAG-KATPFR-HQFTRLAIANFVTHTKHP 266 (304)
Q Consensus 232 P~lv~~~~~~~-~~~~y~-g~~~~~~i~~fi~~~~~p 266 (304)
|++++|+.++. ....|. |..+.++|.+||.++...
T Consensus 83 Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~ 119 (133)
T 2dj3_A 83 PTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATK 119 (133)
T ss_dssp SEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSS
T ss_pred CEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhccc
Confidence 99999987653 334677 568999999999976543
No 361
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.12 E-value=2.1e-05 Score=56.36 Aligned_cols=95 Identities=13% Similarity=0.099 Sum_probs=67.4
Q ss_pred CCceecCCHHHHHHhhc--cCCeEEEEEecCCCCccHH---HHHHHhccCCceeEEEe----cCHHHHhhcCCCCCCCCC
Q 021976 162 LGTYSITTTDEAERILT--VESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT----TSADVAEFFHIHPKSKRP 232 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~--~~~~~~v~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~----~~~~l~~~~~i~~~~~~P 232 (304)
..+..+++ +++++.+. .+++++|.|+++||+++.. .+..++....++.|..+ .+++++++|++.+ .|
T Consensus 5 ~~v~~l~~-~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~~~~~~~~v~~---~P 80 (111)
T 2pu9_C 5 GKVTEVNK-DTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRV---VP 80 (111)
T ss_dssp TSEEEECT-TTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCSB---SS
T ss_pred CccEEech-HHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCCeEEEEEecCcchHHHHHHcCCCe---ee
Confidence 34566654 56666665 4678999999999988543 44555533334666643 4678999999997 99
Q ss_pred eEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 233 ~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
++++++.+. ....+.|. +.++|.+||.+
T Consensus 81 t~~~~~~G~-~~~~~~G~-~~~~l~~~l~~ 108 (111)
T 2pu9_C 81 TFKILKENS-VVGEVTGA-KYDKLLEAIQA 108 (111)
T ss_dssp EEEEESSSS-EEEEEESS-CHHHHHHHHHH
T ss_pred EEEEEeCCc-EEEEEcCC-CHHHHHHHHHH
Confidence 988886553 45567786 58899999875
No 362
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=98.12 E-value=6e-06 Score=65.72 Aligned_cols=40 Identities=10% Similarity=0.228 Sum_probs=33.9
Q ss_pred CCcEEEEEEcCCChhhhhhHHHH---HHHHHHhhCCcEEEEEe
Q 021976 73 NRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVD 112 (304)
Q Consensus 73 ~~~~lv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~vd 112 (304)
+++++|.|+.-||++|+++.|.+ .++.+.+.+++.+..++
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~ 63 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYH 63 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEE
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEe
Confidence 47899999999999999999986 68999997666666555
No 363
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.10 E-value=3.3e-06 Score=62.36 Aligned_cols=98 Identities=15% Similarity=0.190 Sum_probs=72.4
Q ss_pred CCceecCCHHHHHHhhcc----CCeEEEEEecCCCCc---cHHHHHHHhccCCceeEEEe---cCHHHHhhcCCCCCCCC
Q 021976 162 LGTYSITTTDEAERILTV----ESKLVLGFLHDLEGM---ESEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKR 231 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~~~~----~~~~~v~f~~~~~~~---~~~~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~ 231 (304)
..+..+++.+++++.+.. +++++|.|+.+||.+ ....+..++....++.|..+ .+++++++|++.. .
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~---~ 90 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEA---M 90 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCTTBCCEECCTTTSGGGHHHHTCCS---S
T ss_pred cceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCCEEEEEeccchHHHHHHcCCCc---c
Confidence 457777787888877754 678899999999987 45556666533336666654 4778999999997 9
Q ss_pred CeEEEEecCCCceecccCCCCHHHHHHHHhcCC
Q 021976 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (304)
Q Consensus 232 P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 264 (304)
|++++++.+ .....+.| .+.++|.+||.+..
T Consensus 91 Pt~~~~~~g-~~~~~~~g-~~~~~l~~~l~~~~ 121 (130)
T 1wmj_A 91 PTFLFIKDG-AEADKVVG-ARKDDLQNTIVKHV 121 (130)
T ss_dssp CCCCBCTTT-TCCBCCCT-TCTTTHHHHHHHHT
T ss_pred ceEEEEeCC-eEEEEEeC-CCHHHHHHHHHHHH
Confidence 999998544 35566777 57889999998643
No 364
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.09 E-value=2e-05 Score=65.15 Aligned_cols=116 Identities=13% Similarity=0.113 Sum_probs=77.7
Q ss_pred CCceecCCHHHHHH-hhccCCeEEEEEecCCCCccH---HHHHHHh-ccCC---ceeEEEe-----cCHHHHhhcCCCCC
Q 021976 162 LGTYSITTTDEAER-ILTVESKLVLGFLHDLEGMES---EELAAAS-KLHS---DVNFYQT-----TSADVAEFFHIHPK 228 (304)
Q Consensus 162 ~~~~~l~~~~~~~~-~~~~~~~~~v~f~~~~~~~~~---~~~~~~a-~~~~---~~~f~~~-----~~~~l~~~~~i~~~ 228 (304)
.++..+++ ++++. ..+++++++|.|+++||+++. ..+.+++ .+.+ .+.|+.+ .+++++++|+|.+
T Consensus 12 ~~v~~l~~-~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~- 89 (244)
T 3q6o_A 12 DPLTLLQA-DTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPG- 89 (244)
T ss_dssp SSSEEECT-TTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCS-
T ss_pred CCceeCCh-hhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCc-
Confidence 45677755 44544 445568999999999999754 3455555 3443 6777754 3678999999997
Q ss_pred CCCCeEEEEecCCC----ceecccCCCCHHHHHHHHhcC----C------CCcEEeeCccchhhhhcC
Q 021976 229 SKRPALIFLHLEAG----KATPFRHQFTRLAIANFVTHT----K------HPLVVTLTIHNAQFVFQD 282 (304)
Q Consensus 229 ~~~P~lv~~~~~~~----~~~~y~g~~~~~~i~~fi~~~----~------~p~~~~l~~~~~~~~~~~ 282 (304)
+|++++|+.+.. ....+.| .+.+.|.+||.+. . .|.+...+..++..++..
T Consensus 90 --~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~ 154 (244)
T 3q6o_A 90 --FPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFAR 154 (244)
T ss_dssp --SSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHH
T ss_pred --cCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhc
Confidence 999999997532 3446667 5888888888752 2 233344455566666643
No 365
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=98.09 E-value=5.7e-06 Score=60.00 Aligned_cols=67 Identities=15% Similarity=0.358 Sum_probs=47.4
Q ss_pred hcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcc--c-----HHHHHhCCCccccEEEEEeC
Q 021976 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL--E-----KDLAKEYNILAYPTLYLFVA 136 (304)
Q Consensus 64 ~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~--~-----~~~~~~~~v~~~Pt~~~~~~ 136 (304)
+.+++.+++++ ++.|+++||++|++..+.+.+. ++.+-.+|++. + ..+.+..|...+|++++ +
T Consensus 8 ~~~~~~i~~~~--v~vy~~~~Cp~C~~ak~~L~~~------~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi--~ 77 (114)
T 3h8q_A 8 RHLVGLIERSR--VVIFSKSYCPHSTRVKELFSSL------GVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFV--N 77 (114)
T ss_dssp HHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE--T
T ss_pred HHHHHHhccCC--EEEEEcCCCCcHHHHHHHHHHc------CCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEE--C
Confidence 55667775555 3349999999999999888764 34566666664 2 23556778999999866 8
Q ss_pred CeEE
Q 021976 137 GVRQ 140 (304)
Q Consensus 137 g~~~ 140 (304)
|+.+
T Consensus 78 g~~i 81 (114)
T 3h8q_A 78 KVHV 81 (114)
T ss_dssp TEEE
T ss_pred CEEE
Confidence 8543
No 366
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.05 E-value=2.8e-05 Score=56.87 Aligned_cols=97 Identities=12% Similarity=0.077 Sum_probs=68.1
Q ss_pred CCCceecCCHHHHHHhhc--cCCeEEEEEecCCCCccHH---HHHHHhccCCceeEEEe----cCHHHHhhcCCCCCCCC
Q 021976 161 TLGTYSITTTDEAERILT--VESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT----TSADVAEFFHIHPKSKR 231 (304)
Q Consensus 161 ~~~~~~l~~~~~~~~~~~--~~~~~~v~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~----~~~~l~~~~~i~~~~~~ 231 (304)
...+..+++ +++.+.+. ++++++|.|+.+||+++.+ .+.+++....++.|..+ .+++++++|++.+ .
T Consensus 17 ~~~v~~l~~-~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~v~~---~ 92 (124)
T 1faa_A 17 VGKVTEVNK-DTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRV---V 92 (124)
T ss_dssp TTSEEEECT-TTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCSS---S
T ss_pred CCceEEecc-hhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCCCEEEEEecCcchHHHHHHcCCCe---e
Confidence 345667754 55665554 5678999999999988543 34455433335666643 3678999999997 9
Q ss_pred CeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 232 P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
|++++++++. ....+.|.. .+++.++|++.
T Consensus 93 Pt~~~~~~G~-~~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 93 PTFKILKENS-VVGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp SEEEEEETTE-EEEEEESSC-HHHHHHHHHHH
T ss_pred eEEEEEeCCc-EEEEEcCCC-HHHHHHHHHHh
Confidence 9999887653 445677764 88999999763
No 367
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=98.03 E-value=2.6e-06 Score=63.28 Aligned_cols=71 Identities=10% Similarity=0.235 Sum_probs=49.4
Q ss_pred hhcHHHHhcCCCcEEEEEEcCCChhhhhh-HHHHHHHHHHhhCCcEEEEEeCccc-------HHHHHhCCCccccEEEEE
Q 021976 63 GKNFSEFMGKNRNVMVMFYANWCYWSKKL-APEFAAAAKMLKGEADLVMVDAYLE-------KDLAKEYNILAYPTLYLF 134 (304)
Q Consensus 63 ~~~~~~~~~~~~~~lv~f~a~wC~~C~~~-~~~~~~~~~~~~~~~~~~~vd~~~~-------~~~~~~~~v~~~Pt~~~~ 134 (304)
.+.+++.+...+ ++.|+.+||++|++. .+.+.+.... .+.+..+|++.+ .++.+.+|+..+|++ |
T Consensus 27 ~~~v~~~i~~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~---~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v--f 99 (129)
T 3ctg_A 27 VAHVKDLIGQKE--VFVAAKTYCPYCKATLSTLFQELNVP---KSKALVLELDEMSNGSEIQDALEEISGQKTVPNV--Y 99 (129)
T ss_dssp HHHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHTTSCCC---GGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--E
T ss_pred HHHHHHHHcCCC--EEEEECCCCCchHHHHHHHHHhcCcc---CCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE--E
Confidence 355666665554 677999999999998 7777654321 255666666544 357788999999996 4
Q ss_pred eCCeEE
Q 021976 135 VAGVRQ 140 (304)
Q Consensus 135 ~~g~~~ 140 (304)
.+|+.+
T Consensus 100 i~g~~i 105 (129)
T 3ctg_A 100 INGKHI 105 (129)
T ss_dssp ETTEEE
T ss_pred ECCEEE
Confidence 588543
No 368
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.01 E-value=1.6e-05 Score=57.06 Aligned_cols=68 Identities=19% Similarity=0.329 Sum_probs=49.7
Q ss_pred hhcHHHHhcCCCcEEEEEEc-----CCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHH----HHHhCCCccccEEEE
Q 021976 63 GKNFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEYNILAYPTLYL 133 (304)
Q Consensus 63 ~~~~~~~~~~~~~~lv~f~a-----~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v~~~Pt~~~ 133 (304)
.+.+++++.+++ ++.|+. +||++|++..+.+.+. ++.+..+|++++++ +.+..|...+|++
T Consensus 5 ~~~~~~~i~~~~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~i-- 74 (109)
T 1wik_A 5 SSGLKVLTNKAS--VMLFMKGNKQEAKCGFSKQILEILNST------GVEYETFDILEDEEVRQGLKTFSNWPTYPQL-- 74 (109)
T ss_dssp CCCHHHHHTTSS--EEEEESSTTTCCCSSTHHHHHHHHHHT------CSCEEEEESSSCHHHHHHHHHHHSCCSSCEE--
T ss_pred HHHHHHHhccCC--EEEEEecCCCCCCCchHHHHHHHHHHc------CCCeEEEECCCCHHHHHHHHHHhCCCCCCEE--
Confidence 356777776665 344666 9999999999888653 57789999988764 4445688999985
Q ss_pred EeCCeEE
Q 021976 134 FVAGVRQ 140 (304)
Q Consensus 134 ~~~g~~~ 140 (304)
|.+|+.+
T Consensus 75 fi~g~~i 81 (109)
T 1wik_A 75 YVRGDLV 81 (109)
T ss_dssp ECSSSEE
T ss_pred EECCEEE
Confidence 5577543
No 369
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.26 E-value=7.5e-07 Score=63.15 Aligned_cols=95 Identities=11% Similarity=0.177 Sum_probs=65.1
Q ss_pred eecCCHHHHHHhhccCCeEEEEEecCCCCccHHH---HHHHh-ccCCceeEEE---ecCHHHHhhcCCCCCCCCCeEEEE
Q 021976 165 YSITTTDEAERILTVESKLVLGFLHDLEGMESEE---LAAAS-KLHSDVNFYQ---TTSADVAEFFHIHPKSKRPALIFL 237 (304)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~---~~~~a-~~~~~~~f~~---~~~~~l~~~~~i~~~~~~P~lv~~ 237 (304)
..+++.+..+..+++++++++.|+++||..+... +..++ .+.+++.+.. ..+++++++|++.. .|+++++
T Consensus 4 ~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~---~Pt~~~~ 80 (106)
T 2yj7_A 4 IEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRS---IPTLLLF 80 (106)
Confidence 3443333223444667788999999999875433 34444 3333555553 36778999999996 9999999
Q ss_pred ecCCCceecccCCCCHHHHHHHHhcC
Q 021976 238 HLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 238 ~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
+++ .....+.|..+.+++.+||.+.
T Consensus 81 ~~g-~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 81 KNG-QVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 544 3566788888889999998753
No 370
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=97.99 E-value=2.8e-05 Score=67.03 Aligned_cols=86 Identities=15% Similarity=0.129 Sum_probs=64.9
Q ss_pred CCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCc---------------------ccHHHHHhCCCc---
Q 021976 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY---------------------LEKDLAKEYNIL--- 126 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~---------------------~~~~~~~~~~v~--- 126 (304)
.+|+++++|| +.||+.|..+.+.+.+ ....++.++.|+.+ .+.++++.|||.
T Consensus 23 ~Gk~vvl~F~p~~~tp~C~~e~~~~~~---~~~~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~~~ygv~~~~ 99 (322)
T 4eo3_A 23 YGKYTILFFFPKAGTSGSTREAVEFSR---ENFEKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILHEFFNVLENG 99 (322)
T ss_dssp TTSEEEEEECSSTTSHHHHHHHHHHHH---SCCTTEEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHHHHTTCEETT
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHH---HhhCCCEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHHHhcCCCCCC
Confidence 6789999999 5799999998887754 22226778888764 345688999984
Q ss_pred -cccEEEEEe-CCeEEEEeeCC---CCHHHHHHHHHHHh
Q 021976 127 -AYPTLYLFV-AGVRQFQFFGE---RTRDVISAWVREKM 160 (304)
Q Consensus 127 -~~Pt~~~~~-~g~~~~~~~g~---~~~~~l~~~i~~~~ 160 (304)
.+|++++++ +|++...|.+- ...+++.+++++..
T Consensus 100 ~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~~ 138 (322)
T 4eo3_A 100 KTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRLI 138 (322)
T ss_dssp EECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHHH
T ss_pred cCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhhc
Confidence 478888887 89887777663 44688888888765
No 371
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=97.99 E-value=2.8e-05 Score=71.38 Aligned_cols=118 Identities=13% Similarity=0.115 Sum_probs=80.5
Q ss_pred CCceecCCHHHHHHh-hccCCeEEEEEecCCCCcc---HHHHHHHh-ccCC---ceeEEEec-----CHHHHhhcCCCCC
Q 021976 162 LGTYSITTTDEAERI-LTVESKLVLGFLHDLEGME---SEELAAAS-KLHS---DVNFYQTT-----SADVAEFFHIHPK 228 (304)
Q Consensus 162 ~~~~~l~~~~~~~~~-~~~~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~---~~~f~~~~-----~~~l~~~~~i~~~ 228 (304)
..+..++. ++++.. .+++++++|.|+++||+++ ...+.+++ .+.+ .+.|+.+. +++++++|+|.+
T Consensus 12 ~~V~~Lt~-~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~- 89 (519)
T 3t58_A 12 DPLTLLDA-DSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAG- 89 (519)
T ss_dssp SSSEEECT-TTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCS-
T ss_pred CCcEECCh-HHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcc-
Confidence 34666754 455554 4566899999999999874 33455555 3443 67777653 678999999997
Q ss_pred CCCCeEEEEecCC---CceecccCCCCHHHHHHHHhcC----C------CCcEEeeCccchhhhhcCC
Q 021976 229 SKRPALIFLHLEA---GKATPFRHQFTRLAIANFVTHT----K------HPLVVTLTIHNAQFVFQDP 283 (304)
Q Consensus 229 ~~~P~lv~~~~~~---~~~~~y~g~~~~~~i~~fi~~~----~------~p~~~~l~~~~~~~~~~~~ 283 (304)
+|++++|+++. .....+.|..+.+.|.+||.+. . .|.+..++..++..++...
T Consensus 90 --~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~ 155 (519)
T 3t58_A 90 --FPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRN 155 (519)
T ss_dssp --BSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSC
T ss_pred --cCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccC
Confidence 99999999643 2345566778998888888752 2 2334556666777666554
No 372
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.99 E-value=1.7e-05 Score=58.50 Aligned_cols=85 Identities=8% Similarity=0.089 Sum_probs=62.6
Q ss_pred ccCCeEEEEEecCCCCccHHHHHHH------hc-cCCceeEEEe-----cCHHHHhhcCCCCCCCCCeEEEEecCCCcee
Q 021976 178 TVESKLVLGFLHDLEGMESEELAAA------SK-LHSDVNFYQT-----TSADVAEFFHIHPKSKRPALIFLHLEAGKAT 245 (304)
Q Consensus 178 ~~~~~~~v~f~~~~~~~~~~~~~~~------a~-~~~~~~f~~~-----~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~ 245 (304)
..+++++|.|+.+||.++......+ +. ...++.+..+ .+.+++++|++.+ +|+++++..++....
T Consensus 25 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~---~Pt~~~~d~~G~~~~ 101 (130)
T 2kuc_A 25 VEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHA---YPTLLFINSSGEVVY 101 (130)
T ss_dssp HHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCS---SCEEEEECTTSCEEE
T ss_pred hcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCC---CCEEEEECCCCcEEE
Confidence 3577899999999999865543332 22 2334555543 3568999999997 999999966655667
Q ss_pred cccCCCCHHHHHHHHhcCCC
Q 021976 246 PFRHQFTRLAIANFVTHTKH 265 (304)
Q Consensus 246 ~y~g~~~~~~i~~fi~~~~~ 265 (304)
.+.|..+.++|.+||++...
T Consensus 102 ~~~G~~~~~~l~~~l~~~~~ 121 (130)
T 2kuc_A 102 RLVGAEDAPELLKKVKLGVE 121 (130)
T ss_dssp EEESCCCHHHHHHHHHHHHS
T ss_pred EecCCCCHHHHHHHHHHHHH
Confidence 78899999999999997543
No 373
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=97.94 E-value=5.3e-05 Score=62.52 Aligned_cols=99 Identities=12% Similarity=0.117 Sum_probs=71.4
Q ss_pred CceecCCHHHHHHhhcc---CCeEEEEEecCCCCcc---HHHHHHHhccCCceeEEEec--CHHHHhhcCCCCCCCCCeE
Q 021976 163 GTYSITTTDEAERILTV---ESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQTT--SADVAEFFHIHPKSKRPAL 234 (304)
Q Consensus 163 ~~~~l~~~~~~~~~~~~---~~~~~v~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~~--~~~l~~~~~i~~~~~~P~l 234 (304)
.+..+.+.+++...+.. +..++|.|+++||+++ ...+..++.....+.|..+. .+++++.|++.+ +|++
T Consensus 113 ~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~v~f~kVd~d~~~l~~~~~I~~---~PTl 189 (245)
T 1a0r_P 113 FVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPMVKFCKIKASNTGAGDRFSSDV---LPTL 189 (245)
T ss_dssp SEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTTSEEEEEEHHHHCCTTSSCTTT---CSEE
T ss_pred eEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCCEEEEEeCCcHHHHHHCCCCC---CCEE
Confidence 46777778888887743 6788999999999985 44456666444557887653 345888999997 9999
Q ss_pred EEEecCCCceecccCC-------CCHHHHHHHHhcCCC
Q 021976 235 IFLHLEAGKATPFRHQ-------FTRLAIANFVTHTKH 265 (304)
Q Consensus 235 v~~~~~~~~~~~y~g~-------~~~~~i~~fi~~~~~ 265 (304)
++|+.+. ....+.|. ++.+.|..||.++..
T Consensus 190 l~~~~G~-~v~~~vG~~~~~g~~~~~e~Le~~L~~~g~ 226 (245)
T 1a0r_P 190 LVYKGGE-LLSNFISVTEQLAEEFFTGDVESFLNEYGL 226 (245)
T ss_dssp EEEETTE-EEEEETTGGGGSCTTCCHHHHHHHHHTTTC
T ss_pred EEEECCE-EEEEEeCCcccccccccHHHHHHHHHHcCC
Confidence 9998653 32333332 567899999998753
No 374
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.93 E-value=4.4e-05 Score=56.57 Aligned_cols=82 Identities=9% Similarity=0.110 Sum_probs=60.2
Q ss_pred ccCCeEEEEEecCCCCccHHH---HH--HHh-ccCCceeEEE------ecCHHHHhhcCC---CCCCCCCeEEEEecCCC
Q 021976 178 TVESKLVLGFLHDLEGMESEE---LA--AAS-KLHSDVNFYQ------TTSADVAEFFHI---HPKSKRPALIFLHLEAG 242 (304)
Q Consensus 178 ~~~~~~~v~f~~~~~~~~~~~---~~--~~a-~~~~~~~f~~------~~~~~l~~~~~i---~~~~~~P~lv~~~~~~~ 242 (304)
..+++++|.|+.+||+++... +. .++ .+.+++.+.. ..+++++++|++ .+ .|+++++..++.
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~---~Pt~~~~d~~G~ 103 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDG---IPAVVVVNSDGK 103 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGC---SSEEEEECTTSC
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCc---cceEEEECCCCC
Confidence 458889999999999985443 33 333 2334555553 356789999999 86 999999966665
Q ss_pred ceecccC-------CCCHHHHHHHHhc
Q 021976 243 KATPFRH-------QFTRLAIANFVTH 262 (304)
Q Consensus 243 ~~~~y~g-------~~~~~~i~~fi~~ 262 (304)
....+.| ..+.+.+.+|+++
T Consensus 104 ~~~~~~g~~~~~~~~~~~~~l~~~l~~ 130 (133)
T 3fk8_A 104 VRYTTKGGELANARKMSDQGIYDFFAK 130 (133)
T ss_dssp EEEECCSCTTTTGGGSCHHHHHHHHHH
T ss_pred EEEEecCCcccccccCCHHHHHHHHHH
Confidence 6666667 5688999999875
No 375
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=97.92 E-value=5.5e-05 Score=55.36 Aligned_cols=93 Identities=10% Similarity=0.072 Sum_probs=67.7
Q ss_pred eecCCHHHHHHhhcc--CCeEEEEEecC-------CCCccHH---HHHHHh-ccCCceeEEEe----------cCHHHHh
Q 021976 165 YSITTTDEAERILTV--ESKLVLGFLHD-------LEGMESE---ELAAAS-KLHSDVNFYQT----------TSADVAE 221 (304)
Q Consensus 165 ~~l~~~~~~~~~~~~--~~~~~v~f~~~-------~~~~~~~---~~~~~a-~~~~~~~f~~~----------~~~~l~~ 221 (304)
..+.+.+++.+.+.+ +.+++|.|+.+ ||+++.. .+..++ .+.+++.|..+ .+.++++
T Consensus 7 v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~ 86 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRK 86 (123)
T ss_dssp EEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHH
T ss_pred EEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHH
Confidence 345677888887765 78899999999 9988544 455555 34456776643 4568999
Q ss_pred hcCCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 222 FFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 222 ~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
+|++.+ .|++++|+.+ .+...+.| .+.+.|.+||.+
T Consensus 87 ~~~i~~---~Pt~~~~~~~-~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 87 NLKVTA---VPTLLKYGTP-QKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHCCCS---SSEEEETTSS-CEEEGGGG-GCHHHHHHHHHC
T ss_pred HCCCCe---eCEEEEEcCC-ceEecccc-CCHHHHHHHHhc
Confidence 999997 9999999873 24444444 578899999875
No 376
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=97.84 E-value=0.00015 Score=58.10 Aligned_cols=86 Identities=20% Similarity=0.265 Sum_probs=65.4
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHH-HHHHHHhh--CCcEEEEEeCcc---------------------------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEF-AAAAKMLK--GEADLVMVDAYL--------------------------------- 115 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~-~~~~~~~~--~~~~~~~vd~~~--------------------------------- 115 (304)
+.++++|.|+.-.||+|+++.+.+ ..+.+.|. +++.|...+..-
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p~~~~~s~~Aa~aa~a~~~~~~~~f~~~~~aLf~~ 107 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVMFHGKGSRLAALASEEVWKEDPDSFWDFHEKLFEK 107 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECCCSHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecCccchhHHHHHHHHHHHHhhCHHHHHHHHHHHHHh
Confidence 457899999999999999999886 66777773 367777665310
Q ss_pred --------------------------------------------cHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHH
Q 021976 116 --------------------------------------------EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDV 151 (304)
Q Consensus 116 --------------------------------------------~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~ 151 (304)
+...++++||.++||+++ +|+. +.|..+.+.
T Consensus 108 ~~~~~~~~~~~~~L~~~a~~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~gV~gtPtfvv--nG~~---~~G~~~~e~ 182 (202)
T 3gha_A 108 QPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKMNIQATPTIYV--NDKV---IKNFADYDE 182 (202)
T ss_dssp CCSSSSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHTTTHHHHHHHHHHHHHTTCCSSCEEEE--TTEE---CSCTTCHHH
T ss_pred CccccccccCHHHHHHHHHHhcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCCcCCEEEE--CCEE---ecCCCCHHH
Confidence 012456789999999988 8843 679999999
Q ss_pred HHHHHHHHhCC
Q 021976 152 ISAWVREKMTL 162 (304)
Q Consensus 152 l~~~i~~~~~~ 162 (304)
|.+.|.+.+..
T Consensus 183 l~~~i~~~~~~ 193 (202)
T 3gha_A 183 IKETIEKELKG 193 (202)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999877643
No 377
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=97.79 E-value=0.00022 Score=57.50 Aligned_cols=88 Identities=14% Similarity=0.285 Sum_probs=67.0
Q ss_pred CCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcEEEEEeCcc----------------------------cHHHHH
Q 021976 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~ 121 (304)
.++.+++.|| +.||+.|..+...+.+...++++ ++.++.|.++. +.++++
T Consensus 55 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~va~ 134 (219)
T 3tue_A 55 KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNIAR 134 (219)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhHHHHhhhhHHhcCccccccccccCcccHHHH
Confidence 5788999999 89999999999999999999987 88888888753 346899
Q ss_pred hCCCc----ccc--EEEEEe-CCeEEEEee----CCCCHHHHHHHHHHH
Q 021976 122 EYNIL----AYP--TLYLFV-AGVRQFQFF----GERTRDVISAWVREK 159 (304)
Q Consensus 122 ~~~v~----~~P--t~~~~~-~g~~~~~~~----g~~~~~~l~~~i~~~ 159 (304)
.||+- +++ .+++++ +|++...+. -.++.+++.+.|+..
T Consensus 135 ~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~aL 183 (219)
T 3tue_A 135 SYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAF 183 (219)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHHh
Confidence 99974 333 566776 786554332 246788888777654
No 378
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=97.78 E-value=3.3e-05 Score=55.09 Aligned_cols=72 Identities=10% Similarity=-0.079 Sum_probs=51.9
Q ss_pred CeEEEEEecCCCCccHHHHHHHhccCCceeEE-Ee------cCHHHHhhcCCCCCCCCCeEEEEecCCCceecccCCCCH
Q 021976 181 SKLVLGFLHDLEGMESEELAAASKLHSDVNFY-QT------TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTR 253 (304)
Q Consensus 181 ~~~~v~f~~~~~~~~~~~~~~~a~~~~~~~f~-~~------~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~ 253 (304)
+..+|.|+.+||+++........++...+.+. +. .+++++++|+|.+ +|++++ .+ + .|.|..+.
T Consensus 13 k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~~v~~~~~~~~~~~~~l~~~~~V~~---~PT~~i--~G--~--~~~G~~~~ 83 (106)
T 3kp8_A 13 QIGGTMYGAYWCPHCQDQKELFGAAFDQVPYVECSPNGPGTPQAQECTEAGITS---YPTWII--NG--R--TYTGVRSL 83 (106)
T ss_dssp HHTCEEEECTTCHHHHHHHHHHGGGGGGSCEEESCTTCTTSCCCHHHHHTTCCS---SSEEEE--TT--E--EEESCCCH
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHhCCEEEEecccccchhHHHHHHcCCeE---eCEEEE--CC--E--EecCCCCH
Confidence 34578899999998766544444333333333 23 4678999999997 999776 33 3 38999999
Q ss_pred HHHHHHHh
Q 021976 254 LAIANFVT 261 (304)
Q Consensus 254 ~~i~~fi~ 261 (304)
++|.+|+.
T Consensus 84 ~~l~~~~~ 91 (106)
T 3kp8_A 84 EALAVASG 91 (106)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhC
Confidence 99999986
No 379
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.77 E-value=0.0001 Score=49.70 Aligned_cols=74 Identities=11% Similarity=0.078 Sum_probs=55.8
Q ss_pred eEEEEEecCCCCcc---HHHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEEEEecCCCceecccCCCCHH
Q 021976 182 KLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRL 254 (304)
Q Consensus 182 ~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~ 254 (304)
+.++.|+++||+++ .+.+.+++ .+.+++.+..+ .+++++++|++.+ .|++++ ++ +. .+.|..+.+
T Consensus 4 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~---~Pt~~~--~G--~~-~~~G~~~~~ 75 (85)
T 1fo5_A 4 VKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMA---VPTIVI--NG--DV-EFIGAPTKE 75 (85)
T ss_dssp EEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCC---SSEEEE--TT--EE-ECCSSSSSH
T ss_pred eEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcc---cCEEEE--CC--EE-eeecCCCHH
Confidence 56788999999874 44555555 45456777654 5678999999996 999987 33 44 788988999
Q ss_pred HHHHHHhcC
Q 021976 255 AIANFVTHT 263 (304)
Q Consensus 255 ~i~~fi~~~ 263 (304)
++.+||++.
T Consensus 76 ~l~~~l~~~ 84 (85)
T 1fo5_A 76 ALVEAIKKR 84 (85)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999753
No 380
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.67 E-value=0.00013 Score=49.19 Aligned_cols=73 Identities=11% Similarity=0.061 Sum_probs=54.6
Q ss_pred EEEEEecCCCCcc---HHHHHHHh-ccCCceeEEEe---cCHHHHhhcCCCCCCCCCeEEEEecCCCceecccCCCCHHH
Q 021976 183 LVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLA 255 (304)
Q Consensus 183 ~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~ 255 (304)
.++.|+++||+++ ...+.+++ .+.+++.+..+ .+++++++|++.+ .|++++ ++ +. .+.|..+.+.
T Consensus 4 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~---~Pt~~~--~G--~~-~~~G~~~~~~ 75 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMA---VPAIAI--NG--VV-RFVGAPSREE 75 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSC---SSEEEE--TT--TE-EEECSSCCHH
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCcee---eCEEEE--CC--EE-EEccCCCHHH
Confidence 4678999999874 44455554 45456777654 5778999999996 999987 33 44 7888888999
Q ss_pred HHHHHhcC
Q 021976 256 IANFVTHT 263 (304)
Q Consensus 256 i~~fi~~~ 263 (304)
|.+||.+.
T Consensus 76 l~~~l~~~ 83 (85)
T 1nho_A 76 LFEAINDE 83 (85)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999864
No 381
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=97.66 E-value=0.00034 Score=46.14 Aligned_cols=69 Identities=12% Similarity=0.013 Sum_probs=51.7
Q ss_pred EEEEecCCCCccHHH---HHHHh-ccCCceeEEEecCHHHHhhcCCCCCCCCCeEEEEecCCCceecccCCC-CHHHHHH
Q 021976 184 VLGFLHDLEGMESEE---LAAAS-KLHSDVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQF-TRLAIAN 258 (304)
Q Consensus 184 ~v~f~~~~~~~~~~~---~~~~a-~~~~~~~f~~~~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~-~~~~i~~ 258 (304)
.|.|+.+||+++... +.+++ .+..++.+..+.+.+++++|++.+ .|++++ ++ +.... |.. +.++|.+
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~v~~---~Pt~~~--~G--~~~~~-G~~~~~~~l~~ 74 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIKEMDQILEAGLTA---LPGLAV--DG--ELKIM-GRVASKEEIKK 74 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHTCSS---SSCEEE--TT--EEEEC-SSCCCHHHHHH
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEecCHHHHHHCCCCc---CCEEEE--CC--EEEEc-CCCCCHHHHHH
Confidence 567899999985443 44444 455678888777999999999997 999987 22 44333 887 8999998
Q ss_pred HH
Q 021976 259 FV 260 (304)
Q Consensus 259 fi 260 (304)
|+
T Consensus 75 ~l 76 (77)
T 1ilo_A 75 IL 76 (77)
T ss_dssp HC
T ss_pred Hh
Confidence 86
No 382
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=97.65 E-value=0.00015 Score=55.55 Aligned_cols=83 Identities=8% Similarity=0.137 Sum_probs=61.0
Q ss_pred cCCeEEEEEecCCCCccHHHHHH---Hh-ccC-C----------------------------c---eeEEEecCHHHHhh
Q 021976 179 VESKLVLGFLHDLEGMESEELAA---AS-KLH-S----------------------------D---VNFYQTTSADVAEF 222 (304)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~~~~~---~a-~~~-~----------------------------~---~~f~~~~~~~l~~~ 222 (304)
.+++++|.|+.+||.++...... ++ .+. . . +.+....+.++++.
T Consensus 37 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 116 (164)
T 2h30_A 37 KDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTDNGGTIAQN 116 (164)
T ss_dssp TTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECTTCHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEcCchHHHHH
Confidence 45688999999999886554433 33 110 0 1 33444557789999
Q ss_pred cCCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhcCC
Q 021976 223 FHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (304)
Q Consensus 223 ~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 264 (304)
|++.. .|+++++..++.....+.|..+.++|.++|.+..
T Consensus 117 ~~v~~---~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~ 155 (164)
T 2h30_A 117 LNISV---YPSWALIGKDGDVQRIVKGSINEAQALALIRNPN 155 (164)
T ss_dssp TTCCS---SSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTT
T ss_pred cCCCc---cceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 99986 9999999777667777889899999999999753
No 383
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=97.63 E-value=2e-05 Score=70.85 Aligned_cols=97 Identities=13% Similarity=0.154 Sum_probs=68.5
Q ss_pred CceecCCHHHHHHhhccC--CeEEEEEecCCCCcc---HHHHHHHh-ccC---C-----ceeEEEe---cCHHHHhhcCC
Q 021976 163 GTYSITTTDEAERILTVE--SKLVLGFLHDLEGME---SEELAAAS-KLH---S-----DVNFYQT---TSADVAEFFHI 225 (304)
Q Consensus 163 ~~~~l~~~~~~~~~~~~~--~~~~v~f~~~~~~~~---~~~~~~~a-~~~---~-----~~~f~~~---~~~~l~~~~~i 225 (304)
.+..++. ++++..+..+ .+++|.|+++||+++ ...+..++ .+. + ++.|+.+ .+++++++|+|
T Consensus 24 ~V~~Lt~-~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V 102 (470)
T 3qcp_A 24 SVVDLSG-DDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDI 102 (470)
T ss_dssp TEEECSC-SCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTC
T ss_pred CcEECCH-HHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCC
Confidence 4556643 5666666543 679999999999984 34455555 343 2 4677654 67899999999
Q ss_pred CCCCCCCeEEEEecCC-CceecccCCCCHHHHHHHHhcCC
Q 021976 226 HPKSKRPALIFLHLEA-GKATPFRHQFTRLAIANFVTHTK 264 (304)
Q Consensus 226 ~~~~~~P~lv~~~~~~-~~~~~y~g~~~~~~i~~fi~~~~ 264 (304)
.+ +|++++|++++ .....|.|..+.+.| .||.++.
T Consensus 103 ~~---~PTlilf~~gg~~~~~~y~G~r~~e~L-~fI~k~l 138 (470)
T 3qcp_A 103 NF---VPRLFFFYPRDSCRSNEECGTSSLEHV-AFENSHL 138 (470)
T ss_dssp CS---SCEEEEEEESSCCCTTSCCCCCCEEEE-ECSCTTC
T ss_pred Cc---cCeEEEEECCCceEEEEeeCCCCHHHH-HHHHHhc
Confidence 97 99999998665 356788888777666 6665543
No 384
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=97.59 E-value=0.00012 Score=52.92 Aligned_cols=79 Identities=5% Similarity=-0.103 Sum_probs=57.6
Q ss_pred CCeEEEEEecCCCCccHHHHHHHh-ccCCc-----eeEEE--e-c--CHHHHhhcCCCCCCCCCeEEEEecCCCceeccc
Q 021976 180 ESKLVLGFLHDLEGMESEELAAAS-KLHSD-----VNFYQ--T-T--SADVAEFFHIHPKSKRPALIFLHLEAGKATPFR 248 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~~~a-~~~~~-----~~f~~--~-~--~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~ 248 (304)
....+|.|+++||.++...-..++ .+... +.+.. + . .++++..++|.+ .||+++|+.+ +...++.
T Consensus 18 ~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g---~PT~i~f~~G-~ev~Ri~ 93 (116)
T 3dml_A 18 AELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTF---TPTFVLMAGD-VESGRLE 93 (116)
T ss_dssp -CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCS---SSEEEEEETT-EEEEEEE
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCC---CCEEEEEECC-EEEeeec
Confidence 457899999999999766544444 22222 33332 2 3 257899999986 9999999954 4667889
Q ss_pred CCCCHHHHHHHHhc
Q 021976 249 HQFTRLAIANFVTH 262 (304)
Q Consensus 249 g~~~~~~i~~fi~~ 262 (304)
|..+.+.+..|+.+
T Consensus 94 G~~~~~~f~~~L~~ 107 (116)
T 3dml_A 94 GYPGEDFFWPMLAR 107 (116)
T ss_dssp CCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 99999999999975
No 385
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=97.56 E-value=0.00068 Score=55.23 Aligned_cols=91 Identities=14% Similarity=0.184 Sum_probs=64.5
Q ss_pred CCCcEEEEEEcCCChhhhhhHHH-HHHHHHHh--hCCcEEEEEeCc----------------------------------
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPE-FAAAAKML--KGEADLVMVDAY---------------------------------- 114 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~-~~~~~~~~--~~~~~~~~vd~~---------------------------------- 114 (304)
+.+++++.|+...||+|+++.+. +.++.++| .+++.+...+..
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p~~~~s~~Aa~aa~aa~~~~~f~~~~~aLF~~q~~ 117 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFPLDYRGLKAAMLSHCYEKQEDYFNFNKAVFNSIDS 117 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECCCSHHHHHHHHHGGGCCSHHHHHHHHHHHHHTGGG
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeCCCChhHHHHHHHHHHhhChHHHHHHHHHHHHhCHh
Confidence 35778999999999999999986 47888777 346666555420
Q ss_pred -------c---------------------------------cHHHHHh-CCCccccEEEEEe-CCeEE-----EEeeCCC
Q 021976 115 -------L---------------------------------EKDLAKE-YNILAYPTLYLFV-AGVRQ-----FQFFGER 147 (304)
Q Consensus 115 -------~---------------------------------~~~~~~~-~~v~~~Pt~~~~~-~g~~~-----~~~~g~~ 147 (304)
. +...+++ +||+++||+++.. +|+.+ ....|..
T Consensus 118 ~~~~~~~~~~~L~~iA~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~~GV~GtPtfvv~~~nG~~~~Ga~~~~~~G~~ 197 (226)
T 3f4s_A 118 WNYYNLSDLTLLQRIAALSNLKQDAFNQCINDKKIMDKIVNDKSLAINKLGITAVPIFFIKLNDDKSYIEHNKVKHGGYK 197 (226)
T ss_dssp SCSSSTTCCHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHHCCCSSCEEEEEECCTTCCCCGGGGEEESCC
T ss_pred hcccccCcHHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHHcCCCcCCEEEEEcCCCEEeeCCCCccccccc
Confidence 0 0124667 9999999999875 67432 1234555
Q ss_pred CHHHHHHHHHHHhCC
Q 021976 148 TRDVISAWVREKMTL 162 (304)
Q Consensus 148 ~~~~l~~~i~~~~~~ 162 (304)
+.+.+.+.|.+.+..
T Consensus 198 ~~e~l~~~I~~~l~~ 212 (226)
T 3f4s_A 198 ELKYFTNVIDKLYGK 212 (226)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc
Confidence 599999999887643
No 386
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=97.52 E-value=0.00026 Score=54.90 Aligned_cols=84 Identities=11% Similarity=0.014 Sum_probs=58.7
Q ss_pred hhccCCeEEEEEecCCCCccHHHH------HHHh-ccCCceeEEEe---cCHHH--------------------------
Q 021976 176 ILTVESKLVLGFLHDLEGMESEEL------AAAS-KLHSDVNFYQT---TSADV-------------------------- 219 (304)
Q Consensus 176 ~~~~~~~~~v~f~~~~~~~~~~~~------~~~a-~~~~~~~f~~~---~~~~l-------------------------- 219 (304)
....+++++|.|+.+||+++...- ..+. .+..++.+..+ .++++
T Consensus 43 a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (172)
T 3f9u_A 43 ARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGDKWSYLQ 122 (172)
T ss_dssp HHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHHHHHHHH
T ss_pred HHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchhhhhhhhhhhhhHHH
Confidence 335678899999999999875531 2222 12224555433 22222
Q ss_pred HhhcCCCCCCCCCeEEEEecCCCceecccCCCC-HHHHHHHHhc
Q 021976 220 AEFFHIHPKSKRPALIFLHLEAGKATPFRHQFT-RLAIANFVTH 262 (304)
Q Consensus 220 ~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~-~~~i~~fi~~ 262 (304)
.++|++.+ +|+++++.+++.....+.|..+ .+.+.+||.+
T Consensus 123 ~~~~~v~~---~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~ 163 (172)
T 3f9u_A 123 RVKFGANA---QPFYVLIDNEGNPLNKSYAYDEDISKYINFLQT 163 (172)
T ss_dssp HHHHSCCC---SSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHH
T ss_pred HHHcCCCC---cceEEEECCCCCEEeeccCCCCCHHHHHHHHHH
Confidence 78999997 9999999777667777789888 9999999875
No 387
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=97.48 E-value=0.00012 Score=53.83 Aligned_cols=68 Identities=15% Similarity=0.280 Sum_probs=44.9
Q ss_pred hcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcc--cH----H-HHHhCCCccccEEEEEeC
Q 021976 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL--EK----D-LAKEYNILAYPTLYLFVA 136 (304)
Q Consensus 64 ~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~----~-~~~~~~v~~~Pt~~~~~~ 136 (304)
++|+++++.++ ++.|..+||++|++....+.+... + ++.+..+|++. +. + +.+..|...+|++++ +
T Consensus 5 ~~~~~ii~~~~--Vvvysk~~Cp~C~~ak~lL~~~~~-~--~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~IfI--~ 77 (127)
T 3l4n_A 5 KEYSLILDLSP--IIIFSKSTCSYSKGMKELLENEYQ-F--IPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLLV--N 77 (127)
T ss_dssp HHHHHHHTSCS--EEEEECTTCHHHHHHHHHHHHHEE-E--ESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEE--T
T ss_pred HHHHHHHccCC--EEEEEcCCCccHHHHHHHHHHhcc-c--CCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEEE--C
Confidence 56778776655 677899999999999988877310 1 23344455443 22 2 334458899999855 7
Q ss_pred Ce
Q 021976 137 GV 138 (304)
Q Consensus 137 g~ 138 (304)
|+
T Consensus 78 G~ 79 (127)
T 3l4n_A 78 GV 79 (127)
T ss_dssp TE
T ss_pred CE
Confidence 74
No 388
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=97.45 E-value=0.00038 Score=53.03 Aligned_cols=81 Identities=11% Similarity=0.070 Sum_probs=58.1
Q ss_pred ccCCeEEEEEe-cCCCCccHHHHHHH------hc-cCCceeEEEe---cC-----------HHHHhhcCCCCCCCCCeEE
Q 021976 178 TVESKLVLGFL-HDLEGMESEELAAA------SK-LHSDVNFYQT---TS-----------ADVAEFFHIHPKSKRPALI 235 (304)
Q Consensus 178 ~~~~~~~v~f~-~~~~~~~~~~~~~~------a~-~~~~~~f~~~---~~-----------~~l~~~~~i~~~~~~P~lv 235 (304)
..+++++|.|+ .+||.++......+ +. ...++.+..+ .+ .++++.|++.+ +|+++
T Consensus 45 ~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~---~Pt~~ 121 (154)
T 2ju5_A 45 QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTG---FPELV 121 (154)
T ss_dssp HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCS---SSEEE
T ss_pred hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCC---CCEEE
Confidence 45778899999 99999865554332 22 2234555433 22 37999999997 99999
Q ss_pred EEecCCCceecccCCC--CHHHHHHHHhc
Q 021976 236 FLHLEAGKATPFRHQF--TRLAIANFVTH 262 (304)
Q Consensus 236 ~~~~~~~~~~~y~g~~--~~~~i~~fi~~ 262 (304)
++..++.....+ |.. +.+.+.++|.+
T Consensus 122 ~~d~~G~~~~~~-G~~~~~~~~l~~~l~~ 149 (154)
T 2ju5_A 122 FIDAEGKQLARM-GFEPGGGAAYVSKVKS 149 (154)
T ss_dssp EECTTCCEEEEE-CCCTTCHHHHHHHHHH
T ss_pred EEcCCCCEEEEe-cCCCCCHHHHHHHHHH
Confidence 997666566677 877 88999999875
No 389
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.40 E-value=0.00077 Score=49.53 Aligned_cols=79 Identities=13% Similarity=0.135 Sum_probs=58.7
Q ss_pred CCeEEEEEecCCCCccHHHH---HHHh-ccCCceeEEEe---c----------------------CHHHHhhcCCCCCCC
Q 021976 180 ESKLVLGFLHDLEGMESEEL---AAAS-KLHSDVNFYQT---T----------------------SADVAEFFHIHPKSK 230 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~---~~~a-~~~~~~~f~~~---~----------------------~~~l~~~~~i~~~~~ 230 (304)
+++++|.|+.+||.++.... ..++ .+. ++.+..+ . +.++.+.|++.+
T Consensus 24 ~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~--- 99 (136)
T 1lu4_A 24 GKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPW--- 99 (136)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCS---
T ss_pred CCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCC---
Confidence 56788889999998765443 3333 233 5555543 2 467999999986
Q ss_pred CCeEEEEecCCCceeccc---CCCCHHHHHHHHhcC
Q 021976 231 RPALIFLHLEAGKATPFR---HQFTRLAIANFVTHT 263 (304)
Q Consensus 231 ~P~lv~~~~~~~~~~~y~---g~~~~~~i~~fi~~~ 263 (304)
.|+++++.+++... .+. |..+.++|.++|++.
T Consensus 100 ~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 100 QPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp SSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC
T ss_pred CCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHH
Confidence 99999997766555 788 989999999999864
No 390
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=96.51 E-value=2.4e-05 Score=57.75 Aligned_cols=90 Identities=9% Similarity=0.060 Sum_probs=62.4
Q ss_pred HHHHHhhccCCeEEEEEecCCCCccHHHH------HHHh-ccCCceeEEEe-----cCHHHHhhcCCCCCCCCCeEEEEe
Q 021976 171 DEAERILTVESKLVLGFLHDLEGMESEEL------AAAS-KLHSDVNFYQT-----TSADVAEFFHIHPKSKRPALIFLH 238 (304)
Q Consensus 171 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~------~~~a-~~~~~~~f~~~-----~~~~l~~~~~i~~~~~~P~lv~~~ 238 (304)
+.+......+++++|.|+++||.++.... ..++ .+..++.+..+ .+.+++++|++.+ +|++++|.
T Consensus 10 ~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~---~Pt~~~~d 86 (130)
T 2lst_A 10 EALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPG---TPTFVFLV 86 (130)
Confidence 34444555677889999999999864433 3333 23334555432 3467999999997 99999996
Q ss_pred cC-CCc--eecccCCCCHHHHHHHHhcC
Q 021976 239 LE-AGK--ATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 239 ~~-~~~--~~~y~g~~~~~~i~~fi~~~ 263 (304)
+. +.. ...+.|..+.+.|.+||++.
T Consensus 87 ~~~G~~~~~~~~~G~~~~~~l~~~l~~~ 114 (130)
T 2lst_A 87 PKAGAWEEVGRLFGSRPRAEFLKELRQV 114 (130)
Confidence 43 333 56788988889999999864
No 391
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=97.34 E-value=0.00075 Score=50.37 Aligned_cols=81 Identities=11% Similarity=0.024 Sum_probs=59.0
Q ss_pred cCCeEEEEEecCCCCccHHH---HHHHh-ccCCceeEEEec------------------------------CHHHHhhcC
Q 021976 179 VESKLVLGFLHDLEGMESEE---LAAAS-KLHSDVNFYQTT------------------------------SADVAEFFH 224 (304)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~~---~~~~a-~~~~~~~f~~~~------------------------------~~~l~~~~~ 224 (304)
.+++++|.|+.+||.++... +..++ .+.+++.+..+. +.++++.|+
T Consensus 28 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 107 (148)
T 2b5x_A 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFE 107 (148)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHTC
T ss_pred CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHhC
Confidence 45678889999999875444 33333 344446555332 357999999
Q ss_pred CCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 225 IHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 225 i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
+.. .|+++++.+++.....+.|..+.+++.++|++
T Consensus 108 v~~---~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 142 (148)
T 2b5x_A 108 NEY---VPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNR 142 (148)
T ss_dssp CCC---SSEEEEECTTCBEEEEEESCSTTHHHHHHHHH
T ss_pred CCC---CCEEEEECCCCcEEEEecCCCCHHHHHHHHHH
Confidence 986 99999997776566777888888899988875
No 392
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=97.33 E-value=0.0013 Score=49.59 Aligned_cols=81 Identities=10% Similarity=0.112 Sum_probs=59.8
Q ss_pred cCCeEEEEEecCCCCccHHHHHHH---h-cc-CCceeEEEec---------------------------CHHHHhhcC--
Q 021976 179 VESKLVLGFLHDLEGMESEELAAA---S-KL-HSDVNFYQTT---------------------------SADVAEFFH-- 224 (304)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~~~~~~---a-~~-~~~~~f~~~~---------------------------~~~l~~~~~-- 224 (304)
.+++++|.|+.+||.++......+ . .+ ..++.+..+. ..++.+.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 356889999999999865554443 3 33 2345554331 345788898
Q ss_pred CCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 225 IHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 225 i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
+.. .|+++++.+++.....+.|..+.+.|.++|++
T Consensus 103 v~~---~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 137 (151)
T 3raz_A 103 VGV---LPFTVVEAPKCGYRQTITGEVNEKSLTDAVKL 137 (151)
T ss_dssp SCC---SSEEEEEETTTTEEEECCSCCCHHHHHHHHHH
T ss_pred cCC---CCEEEEECCCCcEEEEECCCCCHHHHHHHHHH
Confidence 776 99999998887778889999999999999985
No 393
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=97.30 E-value=0.0011 Score=48.55 Aligned_cols=79 Identities=18% Similarity=0.173 Sum_probs=57.9
Q ss_pred CCeEEEEEecCCCCccHHHH---HHHh-ccCCceeEEEec--------------------------CHHHHhhcCCCCCC
Q 021976 180 ESKLVLGFLHDLEGMESEEL---AAAS-KLHSDVNFYQTT--------------------------SADVAEFFHIHPKS 229 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~---~~~a-~~~~~~~f~~~~--------------------------~~~l~~~~~i~~~~ 229 (304)
++++++.|+.+||.++.... ..+. .+. ++.+..+. +.++++.|++.+
T Consensus 25 ~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~-- 101 (136)
T 1zzo_A 25 GKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQ-- 101 (136)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCS--
T ss_pred CCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCC--
Confidence 56788889999998764443 3333 233 55555332 457899999986
Q ss_pred CCCeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 230 KRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 230 ~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
.|+++++++++... .+.|..+.++|.++|.+.
T Consensus 102 -~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 102 -QPAYAFVDPHGNVD-VVRGRMSQDELTRRVTAL 133 (136)
T ss_dssp -SSEEEEECTTCCEE-EEESCCCHHHHHHHHHHH
T ss_pred -CceEEEECCCCCEE-EEecCCCHHHHHHHHHHH
Confidence 99999998766555 888999999999999763
No 394
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=97.28 E-value=0.0017 Score=47.56 Aligned_cols=80 Identities=15% Similarity=0.164 Sum_probs=59.6
Q ss_pred CCeEEEEEecCCCCccHHHHHH---Hh-ccCCceeEEEe-------------------------------cCHHHHhhcC
Q 021976 180 ESKLVLGFLHDLEGMESEELAA---AS-KLHSDVNFYQT-------------------------------TSADVAEFFH 224 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~~---~a-~~~~~~~f~~~-------------------------------~~~~l~~~~~ 224 (304)
+++++|.|+.+||.++...... +. ....++.+..+ .+.++.+.|+
T Consensus 22 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 101 (138)
T 4evm_A 22 GKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETYG 101 (138)
T ss_dssp TSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHTT
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHcC
Confidence 5678888999999875544443 33 33444554433 2457999999
Q ss_pred CCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 225 IHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 225 i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
+.+ .|+++++.+++.....+.|..+.+++.++|++
T Consensus 102 v~~---~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 102 VRS---YPTQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp CCS---SSEEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred ccc---CCeEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 986 99999998777677788899999999999875
No 395
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=97.26 E-value=0.00092 Score=51.48 Aligned_cols=91 Identities=11% Similarity=0.049 Sum_probs=59.2
Q ss_pred HHHHHhhccCCeEEEEEecCCCCccHHHHHHHhc----c---CCceeEEEecCHH-HHhhcCCCCCCCCCeEEEEecCCC
Q 021976 171 DEAERILTVESKLVLGFLHDLEGMESEELAAASK----L---HSDVNFYQTTSAD-VAEFFHIHPKSKRPALIFLHLEAG 242 (304)
Q Consensus 171 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~a~----~---~~~~~f~~~~~~~-l~~~~~i~~~~~~P~lv~~~~~~~ 242 (304)
+.++.....+++++|.|+.+||.++......+.. . ..-+.+....+++ ++..|++.. ..+|++++|..++.
T Consensus 37 ~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~-~~~Pt~~~~d~~G~ 115 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDG-GYIPRILFLDPSGK 115 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTC-SCSSEEEEECTTSC
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccC-CcCCeEEEECCCCC
Confidence 4566666678899999999999986555443321 1 1112233344555 788888831 24999999965554
Q ss_pred ceecccCC----------CCHHHHHHHHhc
Q 021976 243 KATPFRHQ----------FTRLAIANFVTH 262 (304)
Q Consensus 243 ~~~~y~g~----------~~~~~i~~fi~~ 262 (304)
....+.|. .+.+.|.++|.+
T Consensus 116 ~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~ 145 (164)
T 1sen_A 116 VHPEIINENGNPSYKYFYVSAEQVVQGMKE 145 (164)
T ss_dssp BCTTCCCTTSCTTSTTCCCSHHHHHHHHHH
T ss_pred EEEEEeCCCCccchhcccCCHHHHHHHHHH
Confidence 55556663 677888888875
No 396
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=97.23 E-value=0.0013 Score=48.88 Aligned_cols=80 Identities=14% Similarity=0.131 Sum_probs=59.2
Q ss_pred cCCeEEEEEecCCCCccHHHH---HHHh-ccC-CceeEEEe-c---------------------------CHHHHhhcCC
Q 021976 179 VESKLVLGFLHDLEGMESEEL---AAAS-KLH-SDVNFYQT-T---------------------------SADVAEFFHI 225 (304)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~~~---~~~a-~~~-~~~~f~~~-~---------------------------~~~l~~~~~i 225 (304)
.+++++|.|+.+||.++.... ..+. .+. .++.+..+ . +.++++.|++
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 456888889999998765543 3333 233 35555543 1 4479999999
Q ss_pred CCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHh
Q 021976 226 HPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVT 261 (304)
Q Consensus 226 ~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~ 261 (304)
.. .|+++++.+++.....+.|..+.+.|.++|+
T Consensus 113 ~~---~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 113 IT---IPTSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp CE---ESEEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred Cc---cCeEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 96 9999999877767778899999999999874
No 397
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=97.22 E-value=0.0012 Score=49.75 Aligned_cols=81 Identities=6% Similarity=0.046 Sum_probs=58.4
Q ss_pred cCCeEEEEEecCCCCccHHHHH---HHh-ccCC-ceeEEE--------------------------ecCHHHHhhcCCCC
Q 021976 179 VESKLVLGFLHDLEGMESEELA---AAS-KLHS-DVNFYQ--------------------------TTSADVAEFFHIHP 227 (304)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~~~~---~~a-~~~~-~~~f~~--------------------------~~~~~l~~~~~i~~ 227 (304)
.+++++|.|+.+||..+..... .++ .+.. .+.+.. ..+.++.+.|++..
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 106 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV 106 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc
Confidence 3568888899999988654433 333 2322 244432 23667999999986
Q ss_pred CCCCCeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 228 KSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 228 ~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
.|+++++.+++.....+.|..+.+.|.++|.+
T Consensus 107 ---~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 138 (153)
T 2l5o_A 107 ---YPTSVLIGKKGEILKTYVGEPDFGKLYQEIDT 138 (153)
T ss_dssp ---SSEEEEECSSSCCCEEEESSCCHHHHHHHHHH
T ss_pred ---cCeEEEECCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 99999997776666778898899999988874
No 398
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=97.18 E-value=0.00042 Score=51.53 Aligned_cols=68 Identities=21% Similarity=0.340 Sum_probs=45.9
Q ss_pred hcHHHHhcCCCcEEEEEEc----CCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHH----HhCCCccccEEEEEe
Q 021976 64 KNFSEFMGKNRNVMVMFYA----NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLA----KEYNILAYPTLYLFV 135 (304)
Q Consensus 64 ~~~~~~~~~~~~~lv~f~a----~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~----~~~~v~~~Pt~~~~~ 135 (304)
+.+++.+..++ ++|+.++ +||++|++....+.+. ++.+..+|+++++++. +..|...+|.++ -
T Consensus 26 ~~v~~~i~~~~-Vvvy~ks~~~~~~Cp~C~~ak~~L~~~------gv~y~~vdI~~d~~~~~~L~~~~G~~tvP~Vf--I 96 (135)
T 2wci_A 26 EKIQRQIAENP-ILLYMKGSPKLPSCGFSAQAVQALAAC------GERFAYVDILQNPDIRAELPKYANWPTFPQLW--V 96 (135)
T ss_dssp HHHHHHHHHCS-EEEEESBCSSSBSSHHHHHHHHHHHTT------CSCCEEEEGGGCHHHHHHHHHHHTCCSSCEEE--E
T ss_pred HHHHHHhccCC-EEEEEEecCCCCCCccHHHHHHHHHHc------CCceEEEECCCCHHHHHHHHHHHCCCCcCEEE--E
Confidence 44556665454 5554444 8999999988877553 5678888988776543 345788899874 4
Q ss_pred CCeEE
Q 021976 136 AGVRQ 140 (304)
Q Consensus 136 ~g~~~ 140 (304)
+|+.+
T Consensus 97 ~G~~i 101 (135)
T 2wci_A 97 DGELV 101 (135)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 88543
No 399
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=97.13 E-value=0.0039 Score=48.83 Aligned_cols=86 Identities=10% Similarity=0.230 Sum_probs=58.9
Q ss_pred CCCcEEEEEE-cCCChhhh-hhHHHHHHHHHHh-hC-CcE-EEEEeCc----------------------ccHHHHHhCC
Q 021976 72 KNRNVMVMFY-ANWCYWSK-KLAPEFAAAAKML-KG-EAD-LVMVDAY----------------------LEKDLAKEYN 124 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~-~~~~~~~~~~~~~-~~-~~~-~~~vd~~----------------------~~~~~~~~~~ 124 (304)
.++.+++.|| +.||+.|. .+.+.|.+.+.++ +. ++. ++.|.++ .+.++++.||
T Consensus 42 ~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~~~~f~lLsD~~~~~a~~yG 121 (182)
T 1xiy_A 42 NNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMDIKKIKYISDGNSSFTDSMN 121 (182)
T ss_dssp TTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTSHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcCCCCceEEEeCchHHHHHhC
Confidence 4555555554 67999999 8999999999988 65 663 7767653 2346888888
Q ss_pred Cc------c-----ccEEEEEeCCeEEEEeeCC-------------CCHHHHHHHHH
Q 021976 125 IL------A-----YPTLYLFVAGVRQFQFFGE-------------RTRDVISAWVR 157 (304)
Q Consensus 125 v~------~-----~Pt~~~~~~g~~~~~~~g~-------------~~~~~l~~~i~ 157 (304)
+. + ....+++++|++...+... ..++++.++|+
T Consensus 122 v~~~~~~~G~g~~~~R~tfvIddG~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~ 178 (182)
T 1xiy_A 122 MLVDKSNFFMGMRPWRFVAIVENNILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLK 178 (182)
T ss_dssp CEEECGGGTCCEEECCEEEEEETTEEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHH
T ss_pred CceeccccCCCCceEEEEEEEcCCEEEEEEEeCCcccccccCcccCCCHHHHHHHHH
Confidence 73 2 3456666888766555322 45777777775
No 400
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=97.08 E-value=0.0018 Score=48.84 Aligned_cols=80 Identities=6% Similarity=-0.025 Sum_probs=57.8
Q ss_pred CCeEEEEEecCCCCccHHHHHHHhccC--CceeEEEe--------------------------cCHHHHhhcCCCCCCCC
Q 021976 180 ESKLVLGFLHDLEGMESEELAAASKLH--SDVNFYQT--------------------------TSADVAEFFHIHPKSKR 231 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~~~a~~~--~~~~f~~~--------------------------~~~~l~~~~~i~~~~~~ 231 (304)
+++++|.|+.+||.++......+..+. +++.+..+ .+.++++.|++.. .
T Consensus 42 gk~~ll~f~~~~C~~C~~~~~~l~~l~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~---~ 118 (156)
T 1kng_A 42 GKVSLVNVWASWCVPCHDEAPLLTELGKDKRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYG---V 118 (156)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHTTCTTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCS---S
T ss_pred CCEEEEEEEcccCHhHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCc---c
Confidence 567888999999998765555443222 33554432 2457888999986 9
Q ss_pred CeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 232 P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
|+++++.+++.....+.|..+.+.+.++|.+
T Consensus 119 P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~ 149 (156)
T 1kng_A 119 PETFVVGREGTIVYKLVGPITPDNLRSVLLP 149 (156)
T ss_dssp CEEEEECTTSBEEEEEESCCCHHHHHHTHHH
T ss_pred CeEEEEcCCCCEEEEEeCCCCHHHHHHHHHH
Confidence 9888887766566678898899988888875
No 401
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=97.07 E-value=0.0021 Score=48.46 Aligned_cols=80 Identities=18% Similarity=0.201 Sum_probs=60.2
Q ss_pred CeEEEEEecCCCCccHHHHHHH---h-ccCCceeEE--Ee----------------------------cCHHHHhhcCCC
Q 021976 181 SKLVLGFLHDLEGMESEELAAA---S-KLHSDVNFY--QT----------------------------TSADVAEFFHIH 226 (304)
Q Consensus 181 ~~~~v~f~~~~~~~~~~~~~~~---a-~~~~~~~f~--~~----------------------------~~~~l~~~~~i~ 226 (304)
++++|.|+.+||.++......+ . .+ ++.+. .. .+.++.+.|++.
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 108 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVL 108 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBC
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCC
Confidence 6788889999998765554443 3 23 44443 23 457799999999
Q ss_pred CCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhcCCC
Q 021976 227 PKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTKH 265 (304)
Q Consensus 227 ~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 265 (304)
. .|+++++.+++.....+.|..+.+.|.++|+++.-
T Consensus 109 ~---~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~ 144 (154)
T 3ia1_A 109 G---QPWTFVVDREGKVVALFAGRAGREALLDALLLAGA 144 (154)
T ss_dssp S---SCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTC
T ss_pred c---ccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccC
Confidence 6 99999998777667788899999999999997643
No 402
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.07 E-value=0.0073 Score=45.49 Aligned_cols=105 Identities=17% Similarity=0.188 Sum_probs=65.9
Q ss_pred HHHhCCCceecCCHHHHHHhhccCCeEEEEEecCCCCc----cHHHHHHHh-ccCCceeEEEecC--H---HHHhhcCCC
Q 021976 157 REKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGM----ESEELAAAS-KLHSDVNFYQTTS--A---DVAEFFHIH 226 (304)
Q Consensus 157 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~f~~~~~~~----~~~~~~~~a-~~~~~~~f~~~~~--~---~l~~~~~i~ 226 (304)
++..-|-+.+++. ++...+..+.-+..+.++....+. ....+..+| .+++++.|..+.. . .+.+.||++
T Consensus 9 ~~~~~PLV~e~t~-en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl~ 87 (147)
T 3bj5_A 9 KHNQLPLVIEFTE-QTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGLK 87 (147)
T ss_dssp ------CEEECCT-TTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTCC
T ss_pred hhccCCeeEEecc-ccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCCC
Confidence 3444466777744 446666655544444445543333 345566677 6888999987654 2 477899998
Q ss_pred CCCCCCeEEEEec-CCCceeccc-CCCCHHHHHHHHhcC
Q 021976 227 PKSKRPALIFLHL-EAGKATPFR-HQFTRLAIANFVTHT 263 (304)
Q Consensus 227 ~~~~~P~lv~~~~-~~~~~~~y~-g~~~~~~i~~fi~~~ 263 (304)
. ...|+++++.. .++..+.+. ++++.+.|.+|+...
T Consensus 88 ~-~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~ 125 (147)
T 3bj5_A 88 K-EECPAVRLITLEEEMTKYKPESEELTAERITEFCHRF 125 (147)
T ss_dssp G-GGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHH
T ss_pred c-ccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHH
Confidence 4 24899998875 444445554 789999999999863
No 403
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=97.05 E-value=0.0057 Score=47.88 Aligned_cols=39 Identities=13% Similarity=0.258 Sum_probs=29.8
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHH-HHHHHHhhC--CcEEEE
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEF-AAAAKMLKG--EADLVM 110 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~-~~~~~~~~~--~~~~~~ 110 (304)
+.++.++.|+...||+|..+.+.+ ..+.++|.+ ++.+..
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~ 51 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQF 51 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEE
Confidence 357789999999999999999998 567777742 454443
No 404
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=97.03 E-value=0.0015 Score=49.13 Aligned_cols=81 Identities=14% Similarity=0.210 Sum_probs=58.4
Q ss_pred CCeEEEEEecCCCCccHHHHHH---Hh-ccCC-ceeEEEe---c----------------------CHHHHhhcCCCCCC
Q 021976 180 ESKLVLGFLHDLEGMESEELAA---AS-KLHS-DVNFYQT---T----------------------SADVAEFFHIHPKS 229 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~~---~a-~~~~-~~~f~~~---~----------------------~~~l~~~~~i~~~~ 229 (304)
+++++|.|+.+||.++...... +. .+.. ++.+..+ . +.++.+.|++..
T Consensus 26 gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-- 103 (151)
T 2f9s_A 26 GKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSP-- 103 (151)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCS--
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCC--
Confidence 5688888999999875544433 32 2322 3554432 2 347899999986
Q ss_pred CCCeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 230 KRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 230 ~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
.|+++++.+++.....+.|..+.+.|.++|.+.
T Consensus 104 -~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~l 136 (151)
T 2f9s_A 104 -LPTTFLINPEGKVVKVVTGTMTESMIHDYMNLI 136 (151)
T ss_dssp -SCEEEEECTTSEEEEEEESCCCHHHHHHHHHHH
T ss_pred -CCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHH
Confidence 999999977765667788988999999999864
No 405
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=97.02 E-value=0.0026 Score=43.28 Aligned_cols=71 Identities=8% Similarity=0.154 Sum_probs=50.1
Q ss_pred EEEEecCCCCccHHHHHHHhccCCc--eeEEEecCHHHHhhcCCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHh
Q 021976 184 VLGFLHDLEGMESEELAAASKLHSD--VNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVT 261 (304)
Q Consensus 184 ~v~f~~~~~~~~~~~~~~~a~~~~~--~~f~~~~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~ 261 (304)
++.|.++||+++...-..+.+.... ..+....+++++++|+++ .|++++ .++ +... |.++.+.|.+|+.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~~~~vdid~~~~l~~~~g~~----vPtl~~-~~G--~~v~--g~~~~~~L~~~l~ 73 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGAFFSVFIDDDAALESAYGLR----VPVLRD-PMG--RELD--WPFDAPRLRAWLD 73 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCCEEEEECTTCHHHHHHHTTT----CSEEEC-TTC--CEEE--SCCCHHHHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhheEEEECCCCHHHHHHhCCC----cCeEEE-ECC--EEEe--CCCCHHHHHHHHH
Confidence 6779999999876554444433332 334445789999999986 899887 433 3332 8889999999998
Q ss_pred cC
Q 021976 262 HT 263 (304)
Q Consensus 262 ~~ 263 (304)
+.
T Consensus 74 ~~ 75 (87)
T 1ttz_A 74 AA 75 (87)
T ss_dssp TC
T ss_pred HH
Confidence 54
No 406
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=96.98 E-value=0.0014 Score=49.79 Aligned_cols=76 Identities=5% Similarity=-0.062 Sum_probs=49.2
Q ss_pred HHHHhhccCCeEEEEEecCCCCccHHHHHH------Hhcc-CCceeEEEe--cCHHHHhhcCCCCCCCCCeEEEEecCCC
Q 021976 172 EAERILTVESKLVLGFLHDLEGMESEELAA------ASKL-HSDVNFYQT--TSADVAEFFHIHPKSKRPALIFLHLEAG 242 (304)
Q Consensus 172 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~------~a~~-~~~~~f~~~--~~~~l~~~~~i~~~~~~P~lv~~~~~~~ 242 (304)
.+.....++++++|.|+++||+++...-.. +... ..++....+ ...++...+++.+ .|+++++++++.
T Consensus 36 al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~~v~~---~PT~~f~~~~G~ 112 (151)
T 3ph9_A 36 GLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQY---VPRIMFVDPSLT 112 (151)
T ss_dssp HHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCTTCCC---SSEEEEECTTSC
T ss_pred HHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhcCCCC---CCEEEEECCCCC
Confidence 355666678899999999999985443221 1111 112322233 2446788899886 999999996665
Q ss_pred ceecccCC
Q 021976 243 KATPFRHQ 250 (304)
Q Consensus 243 ~~~~y~g~ 250 (304)
......|.
T Consensus 113 ~v~~~~G~ 120 (151)
T 3ph9_A 113 VRADIAGR 120 (151)
T ss_dssp BCTTCCCS
T ss_pred EEEEEeCC
Confidence 66666675
No 407
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=96.94 E-value=0.0034 Score=48.68 Aligned_cols=85 Identities=6% Similarity=-0.046 Sum_probs=58.8
Q ss_pred HHHHHHhCCCceec-CCHHHHHHhhccCCeEEEEEecCCCCccHHHHH------HHh-ccCCceeEEE---ecCHHHHhh
Q 021976 154 AWVREKMTLGTYSI-TTTDEAERILTVESKLVLGFLHDLEGMESEELA------AAS-KLHSDVNFYQ---TTSADVAEF 222 (304)
Q Consensus 154 ~~i~~~~~~~~~~l-~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~------~~a-~~~~~~~f~~---~~~~~l~~~ 222 (304)
-++.++...++.=. ...+.++.....+++++|.|+.+||.++...-. +++ .+..++.+.. ...+++.+.
T Consensus 12 pyl~~ha~~~v~W~~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~ 91 (173)
T 3ira_A 12 PYLLQHAYNPVDWYPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNI 91 (173)
T ss_dssp HHHHTTTTSSSCCBCSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHH
T ss_pred HHHHhccCCCCCCCCcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHH
Confidence 35666666666333 347778888888999999999999998654322 222 2333444443 356788888
Q ss_pred c--------CCCCCCCCCeEEEEecCC
Q 021976 223 F--------HIHPKSKRPALIFLHLEA 241 (304)
Q Consensus 223 ~--------~i~~~~~~P~lv~~~~~~ 241 (304)
| ++.+ .|+++++++++
T Consensus 92 y~~~~q~~~gv~g---~Pt~v~l~~dG 115 (173)
T 3ira_A 92 YMTVCQIILGRGG---WPLNIIMTPGK 115 (173)
T ss_dssp HHHHHHHHHSCCC---SSEEEEECTTS
T ss_pred HHHHHHHHcCCCC---CcceeeECCCC
Confidence 8 8886 99999998665
No 408
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=96.93 E-value=0.011 Score=47.31 Aligned_cols=36 Identities=14% Similarity=0.429 Sum_probs=30.7
Q ss_pred HhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHHHHHhC
Q 021976 121 KEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (304)
Q Consensus 121 ~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (304)
+++||+++||+++ +|+ .+.|..+.+.|.+.|.+...
T Consensus 162 ~~~GV~GtPtfvv--ng~---~~~G~~~~e~l~~~i~~~~~ 197 (205)
T 3gmf_A 162 NQYNVSGTPSFMI--DGI---LLAGTHDWASLRPQILARLN 197 (205)
T ss_dssp HHHCCCSSSEEEE--TTE---ECTTCCSHHHHHHHHHHHHT
T ss_pred HHcCCccCCEEEE--CCE---EEeCCCCHHHHHHHHHHHhh
Confidence 7789999999987 885 46899999999999987764
No 409
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=96.88 E-value=0.0028 Score=42.97 Aligned_cols=55 Identities=7% Similarity=0.181 Sum_probs=40.1
Q ss_pred EEEEEcC----CChhhhhhHHHHHHHHHHhhCCcEEEEEeCc-----ccH----HHHHhCCCc-----cccEEEEEeCCe
Q 021976 77 MVMFYAN----WCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-----LEK----DLAKEYNIL-----AYPTLYLFVAGV 138 (304)
Q Consensus 77 lv~f~a~----wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~-----~~~----~~~~~~~v~-----~~Pt~~~~~~g~ 138 (304)
++.|+.+ ||++|++....+++. ++.+-.+|++ .++ ++.+..|.. .+|++++ .+|+
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~------gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i-~~g~ 74 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK------KQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFA-PDGS 74 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT------TCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEEC-TTSC
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc------CCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEE-ECCE
Confidence 4568889 999999988777652 4667778887 553 356677888 8998754 3664
No 410
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=96.87 E-value=0.0083 Score=44.87 Aligned_cols=80 Identities=13% Similarity=0.130 Sum_probs=57.0
Q ss_pred CCeEEEEEecCCCCccH---HHHHHHh-ccCC-ceeEEEe---cC-----------------------HHHHhhcCCCCC
Q 021976 180 ESKLVLGFLHDLEGMES---EELAAAS-KLHS-DVNFYQT---TS-----------------------ADVAEFFHIHPK 228 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~---~~~~~~a-~~~~-~~~f~~~---~~-----------------------~~l~~~~~i~~~ 228 (304)
+++++|.|+.+||.++. ..+..+. .+.+ ++.+..+ .+ .++.+.|++..
T Consensus 30 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~- 108 (152)
T 2lja_A 30 GKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING- 108 (152)
T ss_dssp TSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS-
T ss_pred CCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC-
Confidence 56788889999998753 3344443 2333 3555433 22 27889999986
Q ss_pred CCCCeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 229 SKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 229 ~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
.|+++++++++.....+.|..+.+.|.++|++
T Consensus 109 --~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 140 (152)
T 2lja_A 109 --IPRFILLDRDGKIISANMTRPSDPKTAEKFNE 140 (152)
T ss_dssp --SCCEEEECTTSCEEESSCCCTTCHHHHHHHHH
T ss_pred --CCEEEEECCCCeEEEccCCCCCHHHHHHHHHH
Confidence 99999998777667777888888899998875
No 411
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=96.85 E-value=0.0013 Score=54.60 Aligned_cols=80 Identities=9% Similarity=-0.011 Sum_probs=56.0
Q ss_pred CcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCc------------------ccHHHHHhCCCccc--cEEEE
Q 021976 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------------------LEKDLAKEYNILAY--PTLYL 133 (304)
Q Consensus 74 ~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~------------------~~~~~~~~~~v~~~--Pt~~~ 133 (304)
...+..|+.++|++|......+.+++.++. +....++.+ .++.+.+++|..++ |++++
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~~~--vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVyTPqI~I 120 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQKGD--VVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQAIL 120 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHHTS--SEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCCSSEEEE
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhccCC--eeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCcccCCEEEE
Confidence 457888999999999999999999987643 432223321 22347888999988 99877
Q ss_pred EeCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 134 FVAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+|+. ..|..+.+.+.+.|.+..
T Consensus 121 --ng~~---~v~G~d~~~l~~~l~~~~ 142 (270)
T 2axo_A 121 --NGRD---HVKGADVRGIYDRLDAFK 142 (270)
T ss_dssp --TTTE---EEETTCHHHHHHHHHHHH
T ss_pred --CCEE---eecCCCHHHHHHHHHHhh
Confidence 7742 223346788888886654
No 412
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=96.83 E-value=0.0041 Score=42.75 Aligned_cols=55 Identities=5% Similarity=0.013 Sum_probs=39.3
Q ss_pred EEEEEcCCChhh------hhhHHHHHHHHHHhhCCcEEEEEeCcccHH----HHHhCC--CccccEEEEEeCCeE
Q 021976 77 MVMFYANWCYWS------KKLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEYN--ILAYPTLYLFVAGVR 139 (304)
Q Consensus 77 lv~f~a~wC~~C------~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~--v~~~Pt~~~~~~g~~ 139 (304)
++.|+.+||+.| ++....+++ .++.+-.+|++.+++ +.+..| ...+|++++ +|+.
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~------~~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi--~g~~ 70 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDG------KRIQYQLVDISQDNALRDEMRTLAGNPKATPPQIVN--GNHY 70 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH------TTCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEEE--TTEE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHH------CCCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEEE--CCEE
Confidence 567899999999 666555543 257788899987643 445678 779998754 7753
No 413
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=96.75 E-value=0.0036 Score=44.53 Aligned_cols=65 Identities=17% Similarity=0.331 Sum_probs=43.7
Q ss_pred cHHHHhcCCCcEEEEEEc-----CCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHH----HhCCCccccEEEEEe
Q 021976 65 NFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLA----KEYNILAYPTLYLFV 135 (304)
Q Consensus 65 ~~~~~~~~~~~~lv~f~a-----~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~----~~~~v~~~Pt~~~~~ 135 (304)
.+++++++++ ++| |.. |||++|++....+.+. ++.+-.+|++++++.. +..|...+|++++
T Consensus 10 ~v~~~i~~~~-Vvv-y~k~t~~~p~Cp~C~~ak~~L~~~------gi~~~~~dI~~~~~~~~~l~~~~g~~tvP~ifi-- 79 (109)
T 3ipz_A 10 TLEKLVNSEK-VVL-FMKGTRDFPMCGFSNTVVQILKNL------NVPFEDVNILENEMLRQGLKEYSNWPTFPQLYI-- 79 (109)
T ss_dssp HHHHHHTSSS-EEE-EESBCSSSBSSHHHHHHHHHHHHT------TCCCEEEEGGGCHHHHHHHHHHHTCSSSCEEEE--
T ss_pred HHHHHHccCC-EEE-EEecCCCCCCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHHCCCCCCeEEE--
Confidence 4456665555 333 444 4999999998877663 4667788887765543 3448889997744
Q ss_pred CCeE
Q 021976 136 AGVR 139 (304)
Q Consensus 136 ~g~~ 139 (304)
+|+.
T Consensus 80 ~g~~ 83 (109)
T 3ipz_A 80 GGEF 83 (109)
T ss_dssp TTEE
T ss_pred CCEE
Confidence 8843
No 414
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=96.74 E-value=0.0098 Score=45.12 Aligned_cols=82 Identities=9% Similarity=0.076 Sum_probs=57.1
Q ss_pred cCCeEEEEEecCCCCccHHHHHH---Hh-ccCCc-eeEEEe---cCHHHHhhc---------------------------
Q 021976 179 VESKLVLGFLHDLEGMESEELAA---AS-KLHSD-VNFYQT---TSADVAEFF--------------------------- 223 (304)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~~~~~---~a-~~~~~-~~f~~~---~~~~l~~~~--------------------------- 223 (304)
.+++++|.|+.+||.++...... +. .+..+ +.+..+ .+++..+.|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 35688889999999886554443 33 33332 555533 334555555
Q ss_pred CCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 224 HIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 224 ~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
++.. .|+++++.+++.....+.|..+.+++.++|.+.
T Consensus 113 ~i~~---~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 149 (165)
T 3or5_A 113 GITG---IPTSFVIDASGNVSGVIVGPRSKADFDRIVKMA 149 (165)
T ss_dssp CSCS---SSEEEEECTTSBEEEEECSCCCHHHHHHHHHHH
T ss_pred CCCC---CCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 7775 999999987776667888988999999999853
No 415
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=96.74 E-value=0.0075 Score=45.48 Aligned_cols=80 Identities=8% Similarity=0.100 Sum_probs=57.7
Q ss_pred CCeEEEEEecCCCCccHHH-HH---HHh-ccC-CceeEEEec-------------------------------CH-----
Q 021976 180 ESKLVLGFLHDLEGMESEE-LA---AAS-KLH-SDVNFYQTT-------------------------------SA----- 217 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~-~~---~~a-~~~-~~~~f~~~~-------------------------------~~----- 217 (304)
+++++|.|+.+||.++... +. ++. ++. .++.+..+. +.
T Consensus 28 gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (158)
T 3eyt_A 28 GKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAMP 107 (158)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSSC
T ss_pred CCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhhH
Confidence 5688888999999886553 33 333 333 245554332 11
Q ss_pred HHHhhcCCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 218 DVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 218 ~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
.+.+.|++.. .|+++++.+++.....+.|..+.+.|.++|.+
T Consensus 108 ~~~~~~~v~~---~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 149 (158)
T 3eyt_A 108 RTMAAYQMRG---TPSLLLIDKAGDLRAHHFGDVSELLLGAEIAT 149 (158)
T ss_dssp HHHHHTTCCS---SSEEEEECTTSEEEEEEESCCCHHHHHHHHHH
T ss_pred HHHHHcCCCC---CCEEEEECCCCCEEEEEeCCCCHHHHHHHHHH
Confidence 5899999986 99999998777667778898899888888875
No 416
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=96.73 E-value=0.0041 Score=45.21 Aligned_cols=66 Identities=12% Similarity=0.184 Sum_probs=43.5
Q ss_pred cHHHHhcCCCcEEEEEEc----CCChhhhhhHHHHHHHHHHhhCCcE---EEEEeCcccHHH----HHhCCCccccEEEE
Q 021976 65 NFSEFMGKNRNVMVMFYA----NWCYWSKKLAPEFAAAAKMLKGEAD---LVMVDAYLEKDL----AKEYNILAYPTLYL 133 (304)
Q Consensus 65 ~~~~~~~~~~~~lv~f~a----~wC~~C~~~~~~~~~~~~~~~~~~~---~~~vd~~~~~~~----~~~~~v~~~Pt~~~ 133 (304)
.+++++++++ ++|+-.. |||++|++....+.+. ++. +..+|++.++++ .+..|...+|++++
T Consensus 8 ~v~~~i~~~~-Vvvfsk~t~~~p~Cp~C~~ak~lL~~~------gv~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP~vfI 80 (121)
T 3gx8_A 8 AIEDAIESAP-VVLFMKGTPEFPKCGFSRATIGLLGNQ------GVDPAKFAAYNVLEDPELREGIKEFSEWPTIPQLYV 80 (121)
T ss_dssp HHHHHHHSCS-EEEEESBCSSSBCTTHHHHHHHHHHHH------TBCGGGEEEEECTTCHHHHHHHHHHHTCCSSCEEEE
T ss_pred HHHHHhccCC-EEEEEeccCCCCCCccHHHHHHHHHHc------CCCcceEEEEEecCCHHHHHHHHHHhCCCCCCeEEE
Confidence 3556666665 3332232 4999999998888774 244 777888777554 34457888999855
Q ss_pred EeCCeE
Q 021976 134 FVAGVR 139 (304)
Q Consensus 134 ~~~g~~ 139 (304)
+|+.
T Consensus 81 --~g~~ 84 (121)
T 3gx8_A 81 --NKEF 84 (121)
T ss_dssp --TTEE
T ss_pred --CCEE
Confidence 8843
No 417
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=96.69 E-value=0.0027 Score=45.43 Aligned_cols=64 Identities=16% Similarity=0.374 Sum_probs=44.1
Q ss_pred cHHHHhcCCCcEEEEEEc-----CCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccHHHHH----hCCCccccEEEEEe
Q 021976 65 NFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAK----EYNILAYPTLYLFV 135 (304)
Q Consensus 65 ~~~~~~~~~~~~lv~f~a-----~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~----~~~v~~~Pt~~~~~ 135 (304)
.+++++++++ +|.|.. +||++|++....+.+. ++.+..+|++.+++..+ ..|...+|.+++
T Consensus 8 ~v~~~i~~~~--Vvlf~kg~~~~~~Cp~C~~ak~~L~~~------gi~y~~~di~~d~~~~~~l~~~~g~~tvP~ifi-- 77 (111)
T 3zyw_A 8 RLKKLTHAAP--CMLFMKGTPQEPRCGFSKQMVEILHKH------NIQFSSFDIFSDEEVRQGLKAYSSWPTYPQLYV-- 77 (111)
T ss_dssp HHHHHHTSSS--EEEEESBCSSSBSSHHHHHHHHHHHHT------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEE--
T ss_pred HHHHHHhcCC--EEEEEecCCCCCcchhHHHHHHHHHHc------CCCeEEEECcCCHHHHHHHHHHHCCCCCCEEEE--
Confidence 3455665443 334667 9999999998877652 46677888887765433 347888999855
Q ss_pred CCe
Q 021976 136 AGV 138 (304)
Q Consensus 136 ~g~ 138 (304)
+|+
T Consensus 78 ~g~ 80 (111)
T 3zyw_A 78 SGE 80 (111)
T ss_dssp TTE
T ss_pred CCE
Confidence 784
No 418
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=96.69 E-value=0.0036 Score=47.93 Aligned_cols=81 Identities=5% Similarity=-0.051 Sum_probs=56.0
Q ss_pred cCCeEEEEEecCCCCccHHHHHHHhccC-CceeEEE--------------------------ecCHHHHhhcCCCCCCCC
Q 021976 179 VESKLVLGFLHDLEGMESEELAAASKLH-SDVNFYQ--------------------------TTSADVAEFFHIHPKSKR 231 (304)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~~~~~~a~~~-~~~~f~~--------------------------~~~~~l~~~~~i~~~~~~ 231 (304)
.+++++|.|+.+||.++......+.++. .++.+.. ..+.++++.|++.. .
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~---~ 126 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYG---A 126 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTTCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCS---S
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCccc---c
Confidence 4667888999999998655544433211 1333322 23457899999986 9
Q ss_pred CeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 232 P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
|+.+++.+++.....+.|..+.+.+.++|.+
T Consensus 127 P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 157 (168)
T 2b1k_A 127 PETFLIDGNGIIRYRHAGDLNPRVWEEEIKP 157 (168)
T ss_dssp SEEEEECTTSBEEEEEESCCCHHHHHHTTHH
T ss_pred CEEEEECCCCeEEEEEeCCCCHHHHHHHHHH
Confidence 9888887666566678888888888888764
No 419
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=96.68 E-value=0.0088 Score=45.16 Aligned_cols=80 Identities=8% Similarity=0.082 Sum_probs=58.3
Q ss_pred CCeEEEEEecCCCCccHHH-HH---HHh-ccCCc-eeEEEec-------------------------------CHH----
Q 021976 180 ESKLVLGFLHDLEGMESEE-LA---AAS-KLHSD-VNFYQTT-------------------------------SAD---- 218 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~-~~---~~a-~~~~~-~~f~~~~-------------------------------~~~---- 218 (304)
+++++|.|+.+||.++... +. ++. .+.++ +.+..+. ...
T Consensus 30 gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (160)
T 3lor_A 30 GKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQRI 109 (160)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCSS
T ss_pred CCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccchh
Confidence 5788889999999886652 33 333 34332 5544332 223
Q ss_pred --HHhhcCCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 219 --VAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 219 --l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
+.+.|++.. .|+++++.+++.....+.|..+.+.+.++|.+
T Consensus 110 ~~~~~~~~v~~---~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 152 (160)
T 3lor_A 110 PSTMKKYRLEG---TPSIILADRKGRIRQVQFGQVDDFVLGLLLGS 152 (160)
T ss_dssp CHHHHHTTCCS---SSEEEEECTTSBEEEEEESCCCHHHHHHHHHH
T ss_pred hhHHHhcccCc---cceEEEECCCCcEEEEecCcCCHHHHHHHHHH
Confidence 889999986 99999998777677788899999999988875
No 420
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=96.67 E-value=0.0038 Score=48.47 Aligned_cols=80 Identities=6% Similarity=-0.011 Sum_probs=57.0
Q ss_pred CCeEEEEEecCCCCccHHHHHHHhccCC-ceeEEE--------------------------ecCHHHHhhcCCCCCCCCC
Q 021976 180 ESKLVLGFLHDLEGMESEELAAASKLHS-DVNFYQ--------------------------TTSADVAEFFHIHPKSKRP 232 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~~~a~~~~-~~~f~~--------------------------~~~~~l~~~~~i~~~~~~P 232 (304)
.++++|.|+.+||.++......+.++.. .+.+.. ..+.++.+.|++.. .|
T Consensus 58 gk~vll~F~a~~C~~C~~~~~~l~~l~~~~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~---~P 134 (176)
T 3kh7_A 58 GKPALVNVWGTWCPSCRVEHPELTRLAEQGVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYG---AP 134 (176)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCS---SC
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCC---CC
Confidence 5678888999999886555544432111 333332 23457889999986 99
Q ss_pred eEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 233 ~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
+.+++.+++.....+.|..+.+.+.++|.+
T Consensus 135 ~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 164 (176)
T 3kh7_A 135 ETYLIDKQGIIRHKIVGVVDQKVWREQLAP 164 (176)
T ss_dssp EEEEECTTCBEEEEEESCCCHHHHHHHTHH
T ss_pred eEEEECCCCeEEEEEcCCCCHHHHHHHHHH
Confidence 999998777677788898898888888775
No 421
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=96.61 E-value=0.009 Score=44.66 Aligned_cols=82 Identities=9% Similarity=0.092 Sum_probs=56.4
Q ss_pred CCeEEEEEecCCCCccHHHHHH---Hh-ccCCc-eeEEEe---cCH----------------------HHHhhcCCCCCC
Q 021976 180 ESKLVLGFLHDLEGMESEELAA---AS-KLHSD-VNFYQT---TSA----------------------DVAEFFHIHPKS 229 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~~---~a-~~~~~-~~f~~~---~~~----------------------~l~~~~~i~~~~ 229 (304)
+++++|.|+.+||..+...... +. .+..+ +.+..+ .++ ++.+.|++..
T Consensus 28 gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-- 105 (152)
T 3gl3_A 28 GSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKG-- 105 (152)
T ss_dssp TSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCS--
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCC--
Confidence 5688888999999886544433 33 23332 444432 122 6788899986
Q ss_pred CCCeEEEEecCCCceecccCC--CCHHHHHHHHhcCC
Q 021976 230 KRPALIFLHLEAGKATPFRHQ--FTRLAIANFVTHTK 264 (304)
Q Consensus 230 ~~P~lv~~~~~~~~~~~y~g~--~~~~~i~~fi~~~~ 264 (304)
.|+++++.+++.....+.|. .+.+.|.++|.+..
T Consensus 106 -~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~ 141 (152)
T 3gl3_A 106 -MPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAAL 141 (152)
T ss_dssp -SSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHT
T ss_pred -CCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHH
Confidence 99999997776566667774 45689999998754
No 422
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.60 E-value=0.0054 Score=43.79 Aligned_cols=57 Identities=14% Similarity=0.143 Sum_probs=39.6
Q ss_pred EEEEEEcCCChhhh------hhHHHHHHHHHHhhCCcEEEEEeCcccHH----HHHhC--------CCccccEEEEEeCC
Q 021976 76 VMVMFYANWCYWSK------KLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEY--------NILAYPTLYLFVAG 137 (304)
Q Consensus 76 ~lv~f~a~wC~~C~------~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~--------~v~~~Pt~~~~~~g 137 (304)
-++.|+.+||+.|+ +....+++ . ++.+..+|++.+++ +.+.+ |...+|++++ +|
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~----~--gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~vfi--~g 80 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEA----N--KIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQIFN--GD 80 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHH----T--TCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEEEE--TT
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHH----c--CCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEEEE--CC
Confidence 46778999999999 55554443 1 57889999987754 34444 6778898754 77
Q ss_pred eEE
Q 021976 138 VRQ 140 (304)
Q Consensus 138 ~~~ 140 (304)
+.+
T Consensus 81 ~~i 83 (111)
T 2ct6_A 81 RYC 83 (111)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 423
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=96.55 E-value=0.0053 Score=51.73 Aligned_cols=82 Identities=13% Similarity=-0.070 Sum_probs=54.4
Q ss_pred HHHHHHhhccCCeEEEEEecCCCCccHHH---HHHHhccCCceeEEE----ecCHHHHhhcCCCCCCCCCeEEEEecCCC
Q 021976 170 TDEAERILTVESKLVLGFLHDLEGMESEE---LAAASKLHSDVNFYQ----TTSADVAEFFHIHPKSKRPALIFLHLEAG 242 (304)
Q Consensus 170 ~~~~~~~~~~~~~~~v~f~~~~~~~~~~~---~~~~a~~~~~~~f~~----~~~~~l~~~~~i~~~~~~P~lv~~~~~~~ 242 (304)
...+.+.+++.. ++.|+.+||+++.+. +.++++....+.+.. ..++++++++++++ +|++++ ++
T Consensus 189 ~~~la~~l~~~~--vV~F~A~WC~~Ck~l~p~le~lA~~l~~Vd~d~~d~~~~~~~la~~~gI~~---vPT~~i--~G-- 259 (291)
T 3kp9_A 189 AVGLAAHLRQIG--GTMYGAYWCPHCQDQKELFGAAFDQVPYVECSPNGPGTPQAQECTEAGITS---YPTWII--NG-- 259 (291)
T ss_dssp HHHHHHHHHHTT--CEEEECTTCHHHHHHHHHHGGGGGGSCEEESCSSCSSSCCCHHHHTTTCCS---TTEEEE--TT--
T ss_pred HHHHHHHhCCCC--EEEEECCCCHHHHHHHHHHHHHHHHcCEEEEeecCchhhHHHHHHHcCCcc---cCeEEE--CC--
Confidence 445556665554 578999999986444 444442222222221 12689999999997 999554 33
Q ss_pred ceecccCCCCHHHHHHHHhc
Q 021976 243 KATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 243 ~~~~y~g~~~~~~i~~fi~~ 262 (304)
+ .|.|..+.++|.+|+.-
T Consensus 260 ~--~~~G~~~~~~L~~~l~~ 277 (291)
T 3kp9_A 260 R--TYTGVRSLEALAVASGY 277 (291)
T ss_dssp E--EEESCCCHHHHHHHTCC
T ss_pred E--EecCCCCHHHHHHHHCC
Confidence 3 39999999999999974
No 424
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.54 E-value=0.0053 Score=50.26 Aligned_cols=58 Identities=9% Similarity=0.133 Sum_probs=43.7
Q ss_pred CcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCccc---HHHHHhCCCccccEEEEEeCCeE
Q 021976 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE---KDLAKEYNILAYPTLYLFVAGVR 139 (304)
Q Consensus 74 ~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~---~~~~~~~~v~~~Pt~~~~~~g~~ 139 (304)
...++.|+.+||++|++....+++. ++.+-.+|++.+ .++.+.+|..++|++++ +|+.
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~------~i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~~--~g~~ 229 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK------GLSFEEIILGHDATIVSVRAVSGRTTVPQVFI--GGKH 229 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH------TCCCEEEETTTTCCHHHHHHHTCCSSSCEEEE--TTEE
T ss_pred cceEEEEECCCChHHHHHHHHHHHc------CCceEEEECCCchHHHHHHHHhCCCCcCEEEE--CCEE
Confidence 4567788999999999998887753 455666777654 34777899999999854 7743
No 425
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=96.41 E-value=0.0087 Score=42.34 Aligned_cols=71 Identities=10% Similarity=0.105 Sum_probs=49.2
Q ss_pred eEEEEEecCCCCccHHH---HHHHhccCCceeEEE---ecCHHHHhhcCCCCCCCCCeEEEEecCCCceecccCCCCHHH
Q 021976 182 KLVLGFLHDLEGMESEE---LAAASKLHSDVNFYQ---TTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLA 255 (304)
Q Consensus 182 ~~~v~f~~~~~~~~~~~---~~~~a~~~~~~~f~~---~~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~ 255 (304)
..++.|..+||.++... +.+++.-.+ +.|.. ..+++++++|+++ .|+++++.++ +.. +.|.++.+.
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~-i~~~~vDId~d~~l~~~ygv~----VP~l~~~~dG--~~v-~~g~~~~~~ 101 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW-FELEVINIDGNEHLTRLYNDR----VPVLFAVNED--KEL-CHYFLDSDV 101 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC-CCCEEEETTTCHHHHHHSTTS----CSEEEETTTT--EEE-ECSSCCCHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC-CeEEEEECCCCHHHHHHhCCC----CceEEEEECC--EEE-EecCCCHHH
Confidence 45778999999985444 333332111 33332 3588999999986 8999888765 333 458889999
Q ss_pred HHHHH
Q 021976 256 IANFV 260 (304)
Q Consensus 256 i~~fi 260 (304)
|.+||
T Consensus 102 L~~~L 106 (107)
T 2fgx_A 102 IGAYL 106 (107)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99997
No 426
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=96.39 E-value=0.02 Score=43.48 Aligned_cols=79 Identities=6% Similarity=0.051 Sum_probs=56.5
Q ss_pred cCCeEEEEEecCCCCccHHHHHHH---h-ccCCceeEEEe-c--------------------C-----------------
Q 021976 179 VESKLVLGFLHDLEGMESEELAAA---S-KLHSDVNFYQT-T--------------------S----------------- 216 (304)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~~~~~~---a-~~~~~~~f~~~-~--------------------~----------------- 216 (304)
..++++|.|+.+||.++......+ . .+. ++.+..+ . +
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 357888899999999865554443 3 233 5665543 2 2
Q ss_pred -----HHHHhhcCCCCCCCCCeEEEEecCCCceecccCCC-CHHHHHHHHhcC
Q 021976 217 -----ADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQF-TRLAIANFVTHT 263 (304)
Q Consensus 217 -----~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~-~~~~i~~fi~~~ 263 (304)
.++.+.|++.. .|+++++.+++.... .|.. +.+.|.++|++.
T Consensus 115 ~~~d~~~~~~~~~v~~---~P~~~lid~~G~i~~--~g~~~~~~~l~~~l~~l 162 (165)
T 3ha9_A 115 MVMDDGSLVEKFNVRS---IDYIVIMDKSSNVLY--AGTTPSLGELESVIKSV 162 (165)
T ss_dssp EEECCSHHHHHTTCCS---SSEEEEEETTCCEEE--EEESCCHHHHHHHHHHC
T ss_pred EEeChHHHHHHhCCCC---ceEEEEEcCCCcEEE--eCCCCCHHHHHHHHHHH
Confidence 27899999986 999999977653333 7888 899999998763
No 427
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=96.37 E-value=0.018 Score=43.45 Aligned_cols=84 Identities=6% Similarity=0.105 Sum_probs=59.3
Q ss_pred CCeEEEEEecCCCCccHHHHH---HHh-ccC-CceeEEEe-c---------------------CHHHHhhcCCCCCCCCC
Q 021976 180 ESKLVLGFLHDLEGMESEELA---AAS-KLH-SDVNFYQT-T---------------------SADVAEFFHIHPKSKRP 232 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~---~~a-~~~-~~~~f~~~-~---------------------~~~l~~~~~i~~~~~~P 232 (304)
+++++|.|+.+||.++...+. ++. .+. .++.+..+ . +.++.+.|++.. .|
T Consensus 41 gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~---~P 117 (158)
T 3hdc_A 41 GKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANR---LP 117 (158)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCS---SS
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCC---cc
Confidence 568888999999987654433 333 233 34555432 1 458999999996 99
Q ss_pred eEEEEecCCCceecccCC--CCHHHHHHHHhcCCCC
Q 021976 233 ALIFLHLEAGKATPFRHQ--FTRLAIANFVTHTKHP 266 (304)
Q Consensus 233 ~lv~~~~~~~~~~~y~g~--~~~~~i~~fi~~~~~p 266 (304)
+++++.+++.....+.|. .+..++.+.+.+..-|
T Consensus 118 ~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~ 153 (158)
T 3hdc_A 118 DTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGH 153 (158)
T ss_dssp EEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC--
T ss_pred eEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhccc
Confidence 999998777677777775 4668888888876655
No 428
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=96.33 E-value=0.015 Score=44.80 Aligned_cols=78 Identities=13% Similarity=-0.044 Sum_probs=51.3
Q ss_pred CCeEEEEEecCCCCccHH---HHHHHhccCCceeEEEe---cCHHHHhhcC---CCCCCCCCeEEEEecCCCceecccCC
Q 021976 180 ESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFH---IHPKSKRPALIFLHLEAGKATPFRHQ 250 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~---i~~~~~~P~lv~~~~~~~~~~~y~g~ 250 (304)
.++++|.|..+||+++.. .+.+++....++.|..+ .++++++.|+ +.+ .|+++++++++.....+ |.
T Consensus 54 ~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~~v~~~~v~~d~~~~~~~~~~~~~v~~---iPt~i~~~~~G~~~~~~-g~ 129 (167)
T 1z6n_A 54 RRYRLLVAGEMWCPDCQINLAALDFAQRLQPNIELAIISKGRAEDDLRQRLALERIA---IPLVLVLDEEFNLLGRF-VE 129 (167)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHCTTEEEEEECHHHHHHHTTTTTTCSSCC---SSEEEEECTTCCEEEEE-ES
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCCC---cCeEEEECCCCCEEEEE-cC
Confidence 567888899999998644 44555543456777655 4567888887 765 99999999875444444 44
Q ss_pred CCHHHHHHHHhc
Q 021976 251 FTRLAIANFVTH 262 (304)
Q Consensus 251 ~~~~~i~~fi~~ 262 (304)
.. ..+.+.+.+
T Consensus 130 ~p-~~~~~~i~~ 140 (167)
T 1z6n_A 130 RP-QAVLDGGPQ 140 (167)
T ss_dssp SC-HHHHHHCHH
T ss_pred CC-HHHHHhHHH
Confidence 33 334444443
No 429
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=96.32 E-value=0.015 Score=43.52 Aligned_cols=82 Identities=7% Similarity=0.102 Sum_probs=56.1
Q ss_pred cCCeEEEEEecCCCCccHHHHH---HHh-ccCC-ceeEEEe-cC-------------------------HHHHhhcCCCC
Q 021976 179 VESKLVLGFLHDLEGMESEELA---AAS-KLHS-DVNFYQT-TS-------------------------ADVAEFFHIHP 227 (304)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~~~~---~~a-~~~~-~~~f~~~-~~-------------------------~~l~~~~~i~~ 227 (304)
.+++++|.|+.+||.++..... .+. .+.+ ++.+..+ .+ ..+.+.|++..
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 3568888899999987555433 333 3333 3554432 22 23889999996
Q ss_pred CCCCCeEEEEecCCCceecccCCC--CHHHHHHHHhcC
Q 021976 228 KSKRPALIFLHLEAGKATPFRHQF--TRLAIANFVTHT 263 (304)
Q Consensus 228 ~~~~P~lv~~~~~~~~~~~y~g~~--~~~~i~~fi~~~ 263 (304)
.|+++++..++.....+.|.. +.+++.++|++-
T Consensus 107 ---~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 141 (154)
T 3kcm_A 107 ---VPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNE 141 (154)
T ss_dssp ---BCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC
T ss_pred ---CCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHH
Confidence 999888887765666777764 667999999863
No 430
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=96.32 E-value=0.016 Score=42.90 Aligned_cols=80 Identities=13% Similarity=0.009 Sum_probs=53.5
Q ss_pred cCCeEEEEEecCCCCccHH---HHHHHh-ccCCc-eeEEEe---cCHH-------------------------HHhhcCC
Q 021976 179 VESKLVLGFLHDLEGMESE---ELAAAS-KLHSD-VNFYQT---TSAD-------------------------VAEFFHI 225 (304)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~---~~~~~a-~~~~~-~~f~~~---~~~~-------------------------l~~~~~i 225 (304)
.+++++|.|+.+||.++.. .+..+. .+..+ +.+..+ .+++ +.+.|++
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 109 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI 109 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCc
Confidence 3568888899999987433 344433 33333 555533 2444 8999999
Q ss_pred CCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHh
Q 021976 226 HPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVT 261 (304)
Q Consensus 226 ~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~ 261 (304)
.. .|+++++.+++.....+.|..+.+++.+.+.
T Consensus 110 ~~---~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~ 142 (148)
T 3hcz_A 110 YA---TPVLYVLDKNKVIIAKRIGYENLDDFLVQYE 142 (148)
T ss_dssp CS---SCEEEEECTTCBEEEESCCGGGHHHHHHHHH
T ss_pred CC---CCEEEEECCCCcEEEecCCHHHHHHHHHHHH
Confidence 86 9999999777666667777656666665554
No 431
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=96.26 E-value=0.062 Score=42.71 Aligned_cols=42 Identities=21% Similarity=0.255 Sum_probs=35.6
Q ss_pred HHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 119 LAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 119 ~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
.++++||.|+||+++..+|+......|..+.+.+.+.+.+.+
T Consensus 161 ~a~~~gv~g~Pt~~v~~~~~~~~~~~g~~~~e~~~~~i~~~~ 202 (208)
T 3kzq_A 161 LAKSLGVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRERI 202 (208)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEECCCSSCSHHHHHHHHHHH
T ss_pred HHHHcCCCcccEEEEEECCEEEEeeCCCCCHHHHHHHHHHHH
Confidence 466789999999999888877777789899899999888765
No 432
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=96.24 E-value=0.029 Score=42.46 Aligned_cols=86 Identities=12% Similarity=0.082 Sum_probs=55.8
Q ss_pred HHHhhccCCeEEEEEecCCCCccHHHHHH------Hh-ccCCceeEEEe-----cCHHHHhhcCCCCCCCCCeEEEEecC
Q 021976 173 AERILTVESKLVLGFLHDLEGMESEELAA------AS-KLHSDVNFYQT-----TSADVAEFFHIHPKSKRPALIFLHLE 240 (304)
Q Consensus 173 ~~~~~~~~~~~~v~f~~~~~~~~~~~~~~------~a-~~~~~~~f~~~-----~~~~l~~~~~i~~~~~~P~lv~~~~~ 240 (304)
+....+.+++++|.|+.+||..+...-.. ++ .+..++.+..+ .+..+.++|++.+ +|+++++.+.
T Consensus 35 l~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~---~P~~~fld~~ 111 (153)
T 2dlx_A 35 KECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGD---FPYVSILDPR 111 (153)
T ss_dssp HHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCS---SSEEEEECTT
T ss_pred HHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCC---CCEEEEEeCC
Confidence 34444568899999999999875443221 11 12234444332 2346889999986 9999999876
Q ss_pred -CCceecccCCCCHHHHHHHHhc
Q 021976 241 -AGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 241 -~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
+.....+.| .+.+++.+++.+
T Consensus 112 ~G~~l~~~~g-~~~~~fl~~L~~ 133 (153)
T 2dlx_A 112 TGQKLVEWHQ-LDVSSFLDQVTG 133 (153)
T ss_dssp TCCCCEEESS-CCHHHHHHHHHH
T ss_pred CCcEeeecCC-CCHHHHHHHHHH
Confidence 434444566 788887777654
No 433
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=96.23 E-value=0.025 Score=41.75 Aligned_cols=78 Identities=15% Similarity=0.123 Sum_probs=52.8
Q ss_pred cCCeEEEEEecCCCCccHHHHHH---Hh-cc-CCc-eeEEEe---c-------------------------CHHHHhhcC
Q 021976 179 VESKLVLGFLHDLEGMESEELAA---AS-KL-HSD-VNFYQT---T-------------------------SADVAEFFH 224 (304)
Q Consensus 179 ~~~~~~v~f~~~~~~~~~~~~~~---~a-~~-~~~-~~f~~~---~-------------------------~~~l~~~~~ 224 (304)
.+++++|.|+.+||.++...... +. .+ .++ +.+..+ . +..+++.|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 35688999999999986555444 33 33 332 555533 2 347899999
Q ss_pred CCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 225 IHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 225 i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
+.. .|+++++.+++.....+. +.+.+.++|.+
T Consensus 112 v~~---~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ 143 (148)
T 3fkf_A 112 ILT---LPTNILLSPTGKILARDI---QGEALTGKLKE 143 (148)
T ss_dssp CCS---SSEEEEECTTSBEEEESC---CHHHHHHHHHH
T ss_pred CCC---cCEEEEECCCCeEEEecC---CHHHHHHHHHH
Confidence 996 999999976653333332 77888888775
No 434
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=96.16 E-value=0.0096 Score=42.98 Aligned_cols=67 Identities=18% Similarity=0.298 Sum_probs=44.0
Q ss_pred hcHHHHhcCCCcEEEEEEc-----CCChhhhhhHHHHHHHHHHhhCCcE-EEEEeCcccHHHHH----hCCCccccEEEE
Q 021976 64 KNFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEAD-LVMVDAYLEKDLAK----EYNILAYPTLYL 133 (304)
Q Consensus 64 ~~~~~~~~~~~~~lv~f~a-----~wC~~C~~~~~~~~~~~~~~~~~~~-~~~vd~~~~~~~~~----~~~v~~~Pt~~~ 133 (304)
+.+++++++++ ++| |.. |||++|++....+.+. ++. +..+|+++++++.+ ..|...+|++++
T Consensus 11 ~~v~~~i~~~~-Vvv-fsk~t~~~p~Cp~C~~ak~lL~~~------gv~~~~~vdV~~d~~~~~~l~~~tg~~tvP~vfI 82 (118)
T 2wem_A 11 EQLDALVKKDK-VVV-FLKGTPEQPQCGFSNAVVQILRLH------GVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYL 82 (118)
T ss_dssp HHHHHHHHHSS-EEE-EESBCSSSBSSHHHHHHHHHHHHT------TCCCCEEEESSSCHHHHHHHHHHHTCCSSCEEEE
T ss_pred HHHHHHhccCC-EEE-EEecCCCCCccHHHHHHHHHHHHc------CCCCCEEEEcCCCHHHHHHHHHHhCCCCcCeEEE
Confidence 34556665554 333 555 4999999988777653 453 77788877655433 347888999854
Q ss_pred EeCCeEE
Q 021976 134 FVAGVRQ 140 (304)
Q Consensus 134 ~~~g~~~ 140 (304)
+|+.+
T Consensus 83 --~g~~I 87 (118)
T 2wem_A 83 --NGEFV 87 (118)
T ss_dssp --TTEEE
T ss_pred --CCEEE
Confidence 78433
No 435
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=96.03 E-value=0.011 Score=46.32 Aligned_cols=42 Identities=7% Similarity=0.150 Sum_probs=35.6
Q ss_pred CCcEEEEEEcCCChhhhhhHHHH-HHHHHHhhCCcEEEEEeCc
Q 021976 73 NRNVMVMFYANWCYWSKKLAPEF-AAAAKMLKGEADLVMVDAY 114 (304)
Q Consensus 73 ~~~~lv~f~a~wC~~C~~~~~~~-~~~~~~~~~~~~~~~vd~~ 114 (304)
.++++|.||..+||+|..+.+.+ .++.+++...+.+..+...
T Consensus 17 ~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~v~~~~~~l~ 59 (195)
T 3c7m_A 17 ADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPFHLE 59 (195)
T ss_dssp CTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTCEEEEEECT
T ss_pred CCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCceEEEEEecC
Confidence 56789999999999999999999 9999988776777666644
No 436
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=95.89 E-value=0.027 Score=43.59 Aligned_cols=80 Identities=16% Similarity=0.140 Sum_probs=53.8
Q ss_pred CCeEEEEEecCCCCccHHHHHH---Hh-ccCCc-e------eEEEe---c-CHHHHhhc---------------------
Q 021976 180 ESKLVLGFLHDLEGMESEELAA---AS-KLHSD-V------NFYQT---T-SADVAEFF--------------------- 223 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~~---~a-~~~~~-~------~f~~~---~-~~~l~~~~--------------------- 223 (304)
.++++|.|+.+||.++...... +. .+..+ + .|..+ . +++..+.|
T Consensus 59 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 138 (183)
T 3lwa_A 59 NQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAAS 138 (183)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGGG
T ss_pred CCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHHH
Confidence 5688888999999875544333 32 22222 3 54433 2 35555555
Q ss_pred ----CCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 224 ----HIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 224 ----~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
++.. .|+++++.+.+.....+.|..+.++|.++|.+
T Consensus 139 ~~~~~v~~---~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 178 (183)
T 3lwa_A 139 LGGVPASV---IPTTIVLDKQHRPAAVFLREVTSKDVLDVALP 178 (183)
T ss_dssp TTTCCTTC---CSEEEEECTTSCEEEEECSCCCHHHHHHHHHH
T ss_pred hccCCCCC---CCeEEEECCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 4564 89988888777677788898899999998875
No 437
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=95.88 E-value=0.039 Score=41.21 Aligned_cols=76 Identities=16% Similarity=0.138 Sum_probs=48.9
Q ss_pred CCeEEEEEecCCCCccHHHHHH---Hh-ccCCc-eeEEEe---c-------------------------CHHHHhhcCCC
Q 021976 180 ESKLVLGFLHDLEGMESEELAA---AS-KLHSD-VNFYQT---T-------------------------SADVAEFFHIH 226 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~~---~a-~~~~~-~~f~~~---~-------------------------~~~l~~~~~i~ 226 (304)
++.++|.|+.+||.++...... +. .+..+ +.+..+ . +.++++.|++.
T Consensus 29 gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 108 (152)
T 2lrn_A 29 GKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIV 108 (152)
T ss_dssp TSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCCC
Confidence 5688888999999986554433 33 23332 555432 2 36789999998
Q ss_pred CCCCCCeEEEEecCCCceecccCCCCHHHHHHHHh
Q 021976 227 PKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVT 261 (304)
Q Consensus 227 ~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~ 261 (304)
. .|+++++.+++.....+ .+.+++.++|+
T Consensus 109 ~---~P~~~lid~~G~i~~~~---~~~~~l~~~l~ 137 (152)
T 2lrn_A 109 G---FPHIILVDPEGKIVAKE---LRGDDLYNTVE 137 (152)
T ss_dssp S---SCEEEEECTTSEEEEEC---CCTTHHHHHHH
T ss_pred c---CCeEEEECCCCeEEEee---CCHHHHHHHHH
Confidence 6 99999997665443343 23445666655
No 438
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=95.69 E-value=0.019 Score=49.87 Aligned_cols=80 Identities=5% Similarity=-0.093 Sum_probs=57.7
Q ss_pred CCeEEEEEecCCCCccHHHHH---HHh-ccCC-ceeEEEe------------------------------cCHHHHhhcC
Q 021976 180 ESKLVLGFLHDLEGMESEELA---AAS-KLHS-DVNFYQT------------------------------TSADVAEFFH 224 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~---~~a-~~~~-~~~f~~~------------------------------~~~~l~~~~~ 224 (304)
.++++|.|+.+||.++..... ++. ++.+ .+.+..+ .+.++++.|+
T Consensus 82 GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~yg 161 (352)
T 2hyx_A 82 GKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYR 161 (352)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTT
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcC
Confidence 568888999999988654443 333 2332 3554433 2357899999
Q ss_pred CCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 225 IHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 225 i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
+.. .|+++++.+++.....+.|..+.++|.++|.+
T Consensus 162 V~~---~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~ 196 (352)
T 2hyx_A 162 NRY---WPAEYLIDATGTVRHIKFGEGDYNVTETLVRQ 196 (352)
T ss_dssp CCE---ESEEEEECTTSBEEEEEESBCCHHHHHHHHHH
T ss_pred CCc---cCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHH
Confidence 986 99999998777677778888888888888874
No 439
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=95.69 E-value=0.24 Score=34.28 Aligned_cols=83 Identities=11% Similarity=0.179 Sum_probs=69.1
Q ss_pred EEEEEEcCCChhhhhhHHHHHHHHHHhh-C-CcEEEEEeCcccHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHH
Q 021976 76 VMVMFYANWCYWSKKLAPEFAAAAKMLK-G-EADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVIS 153 (304)
Q Consensus 76 ~lv~f~a~wC~~C~~~~~~~~~~~~~~~-~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~ 153 (304)
....|.|..-+.+++....+.++-+.+. + ...+-.||..+++++++.++|-.+||++=.... ...+..|..-.+++.
T Consensus 13 L~lLyvag~tp~S~~ai~nL~~i~e~~l~~~~y~LeVIDv~eqPeLAE~~~IvATPTLIK~~P~-P~rriiGd~i~~ql~ 91 (105)
T 1t4y_A 13 LLLQLFVDTRPLSQHIVQRVKNILAAVEATVPISLQVINVADQPQLVEYYRLVVTPALVKIGPG-SRQVLSGIDLTDQLA 91 (105)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHCCSSCEEEEEEETTTCHHHHHHTTCCSSSEEEEEESS-SCEEEESSCHHHHHH
T ss_pred hheeeEeCCCccHHHHHHHHHHHHHHhccCCceEEEEeecccCHHHHhHcCeeeccHhhccCCC-CceEEeChHHHHHHH
Confidence 4447788888889988888888766655 3 788999999999999999999999999877665 677889998889999
Q ss_pred HHHHHH
Q 021976 154 AWVREK 159 (304)
Q Consensus 154 ~~i~~~ 159 (304)
.|.-+=
T Consensus 92 ~wwprW 97 (105)
T 1t4y_A 92 NQLPQW 97 (105)
T ss_dssp HHHHHH
T ss_pred HHhHHH
Confidence 987653
No 440
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=95.68 E-value=0.014 Score=41.57 Aligned_cols=85 Identities=8% Similarity=0.087 Sum_probs=53.8
Q ss_pred HHHHhhccCCeEEEEEecCCCCccHHHHHHHhccCCceeEEEec-C-------HHHHhhcCCCCCCCCCeEEEEecCCCc
Q 021976 172 EAERILTVESKLVLGFLHDLEGMESEELAAASKLHSDVNFYQTT-S-------ADVAEFFHIHPKSKRPALIFLHLEAGK 243 (304)
Q Consensus 172 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~-~-------~~l~~~~~i~~~~~~P~lv~~~~~~~~ 243 (304)
.++..++. ..+++ |+.+||+++......+..+...+.+..+. + .++.+.|++.. .|++ |.++ ..
T Consensus 12 ~~~~~~~~-~~vv~-f~a~~C~~C~~~~~~l~~~~~~~~~v~v~~~~~~~~~~~~l~~~~~v~~---~Pt~--~~~g-~~ 83 (116)
T 2e7p_A 12 KAKELASS-APVVV-FSKTYCGYCNRVKQLLTQVGASYKVVELDELSDGSQLQSALAHWTGRGT---VPNV--FIGG-KQ 83 (116)
T ss_dssp HHHHHHTS-SSEEE-EECTTCHHHHHHHHHHHHHTCCCEEEEGGGSTTHHHHHHHHHHHHSCCS---SCEE--EETT-EE
T ss_pred HHHHHHcC-CCEEE-EECCCChhHHHHHHHHHHcCCCeEEEEccCCCChHHHHHHHHHHhCCCC---cCEE--EECC-EE
Confidence 44455544 34444 99999999776666555555556655442 2 35899999986 9998 3333 23
Q ss_pred eecccCCC---CHHHHHHHHhcCC
Q 021976 244 ATPFRHQF---TRLAIANFVTHTK 264 (304)
Q Consensus 244 ~~~y~g~~---~~~~i~~fi~~~~ 264 (304)
...+.|.. +.+.|.+||.+..
T Consensus 84 v~~~~~~~~~~~~~~l~~~l~~~g 107 (116)
T 2e7p_A 84 IGGCDTVVEKHQRNELLPLLQDAA 107 (116)
T ss_dssp EECHHHHHHHHHTTCHHHHHHHTT
T ss_pred ECChHHHHHHHhCChHHHHHHHcc
Confidence 34444433 5678999998653
No 441
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=95.51 E-value=0.056 Score=41.10 Aligned_cols=80 Identities=13% Similarity=0.070 Sum_probs=54.5
Q ss_pred CCeEEEEEecCCCCc-cHHHHHH---Hh-ccC-----CceeEEEe-cC------------------------------HH
Q 021976 180 ESKLVLGFLHDLEGM-ESEELAA---AS-KLH-----SDVNFYQT-TS------------------------------AD 218 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~-~~~~~~~---~a-~~~-----~~~~f~~~-~~------------------------------~~ 218 (304)
.++++|.|+.+||.+ +...+.. +. .+. .++.+..+ .+ ..
T Consensus 26 gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 105 (171)
T 2rli_A 26 GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVAQ 105 (171)
T ss_dssp TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHHH
T ss_pred CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 467888899999998 6544433 32 231 35554432 22 15
Q ss_pred HHhhcCCCCCCCCC---------------eEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 219 VAEFFHIHPKSKRP---------------ALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 219 l~~~~~i~~~~~~P---------------~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
+.+.|++.. .| +++++.+.+.....+.|..+.++|.+.|.+
T Consensus 106 ~~~~~~v~~---~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 161 (171)
T 2rli_A 106 ASHSYRVYY---NAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRR 161 (171)
T ss_dssp HHHHSCCCC---EECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHH
T ss_pred HHHHhCeEE---EecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHH
Confidence 788899875 44 788888777677778888888888888874
No 442
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=95.33 E-value=0.031 Score=44.67 Aligned_cols=45 Identities=13% Similarity=0.170 Sum_probs=38.8
Q ss_pred cHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 116 EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 116 ~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+.+.++++||.++||++++.+|+....+.|..+.+.+.+.|.+.+
T Consensus 165 ~~~~a~~~gv~g~Pt~~i~~~G~~~~~~~G~~~~~~l~~~l~~~~ 209 (216)
T 2in3_A 165 GFQRVAQWGISGFPALVVESGTDRYLITTGYRPIEALRQLLDTWL 209 (216)
T ss_dssp HHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcccceEEEEECCEEEEeccCCCCHHHHHHHHHHHH
Confidence 456788999999999999999977667889999999999998765
No 443
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=95.26 E-value=0.027 Score=44.14 Aligned_cols=44 Identities=11% Similarity=0.072 Sum_probs=33.2
Q ss_pred CHHHHhhcCCCCCCCCCeEEEEecCCCceec---------ccCCCCHHHHHHHHhc
Q 021976 216 SADVAEFFHIHPKSKRPALIFLHLEAGKATP---------FRHQFTRLAIANFVTH 262 (304)
Q Consensus 216 ~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~---------y~g~~~~~~i~~fi~~ 262 (304)
+.++.+.|++.. .|+++++.+++..... +.|..+.++|.++|++
T Consensus 119 ~~~~~~~~~v~~---~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ 171 (196)
T 2ywi_A 119 TQEVAKAYDAAC---TPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDA 171 (196)
T ss_dssp SCHHHHHHTCCE---ESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHH
T ss_pred chHHHHHhCCCC---CCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHH
Confidence 347899999986 9999999876644444 4577788888888875
No 444
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=95.11 E-value=0.2 Score=37.08 Aligned_cols=77 Identities=13% Similarity=0.219 Sum_probs=51.0
Q ss_pred CCeEEEEEecCCCCc--cHHHHHHHh----cc-CCc-eeEEEe---c-------------------------CHHHHhhc
Q 021976 180 ESKLVLGFLHDLEGM--ESEELAAAS----KL-HSD-VNFYQT---T-------------------------SADVAEFF 223 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~--~~~~~~~~a----~~-~~~-~~f~~~---~-------------------------~~~l~~~~ 223 (304)
+++++|.|+.+||.+ +...+..+. ++ .++ +.+..+ . +.++.+.|
T Consensus 33 gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 112 (150)
T 3fw2_A 33 QKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQY 112 (150)
T ss_dssp TSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHT
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHHc
Confidence 568888999999999 766554443 23 332 444432 1 23789999
Q ss_pred CCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 224 HIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 224 ~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
++.. .|+++++.+++.....+ .+.+++.+.|.+
T Consensus 113 ~v~~---~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ 145 (150)
T 3fw2_A 113 SIYK---IPANILLSSDGKILAKN---LRGEELKKKIEN 145 (150)
T ss_dssp TCCS---SSEEEEECTTSBEEEES---CCHHHHHHHHHH
T ss_pred CCCc---cCeEEEECCCCEEEEcc---CCHHHHHHHHHH
Confidence 9996 99999997765443333 266777777653
No 445
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=95.05 E-value=0.082 Score=40.73 Aligned_cols=75 Identities=8% Similarity=0.052 Sum_probs=51.9
Q ss_pred CCCcEEEEEE-cCCChhhhhhHHHHHHHHHHhhC-CcE-EEEEeCc-----------------------ccHHHHHhCCC
Q 021976 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EAD-LVMVDAY-----------------------LEKDLAKEYNI 125 (304)
Q Consensus 72 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~-~~~vd~~-----------------------~~~~~~~~~~v 125 (304)
.++.+++.|| ..||+.|..+.+.|.+.+.+++. ++. ++.|.++ .+.++++.||+
T Consensus 41 ~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~~~~~~f~lLSD~~~~~a~ayGv 120 (171)
T 2xhf_A 41 RGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTVDPEHKIRMLADMHGEFTRALGT 120 (171)
T ss_dssp TTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHHCTTCCSEEEECTTSHHHHHHTC
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCCCeEEEEeCCchHHHHhCC
Confidence 4566666666 46999999999999999888875 664 7777654 23467888886
Q ss_pred cc-----------ccEEEEEeCCeEEEEeeCC
Q 021976 126 LA-----------YPTLYLFVAGVRQFQFFGE 146 (304)
Q Consensus 126 ~~-----------~Pt~~~~~~g~~~~~~~g~ 146 (304)
.. .-..+++++|++...+..+
T Consensus 121 ~~~~~~~g~g~~~~R~tfvIddG~V~~~~v~~ 152 (171)
T 2xhf_A 121 ELDSSKMLGNNRSRRYAMLIDDNKIRSVSTEP 152 (171)
T ss_dssp BCCCHHHHSSCCBCCEEEEEETTEEEEEEETT
T ss_pred ceeccccCCCcceEEEEEEEeCCEEEEEEEeC
Confidence 41 2345566788766665543
No 446
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=95.04 E-value=0.19 Score=34.76 Aligned_cols=76 Identities=7% Similarity=0.011 Sum_probs=52.1
Q ss_pred CCeEEEEEecCCCCccHHHHHHHhccCCceeEEEe-----cCHHHHhhcCCCCCCCCCeEEEEecCCCceecccCCCCHH
Q 021976 180 ESKLVLGFLHDLEGMESEELAAASKLHSDVNFYQT-----TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRL 254 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~~~a~~~~~~~f~~~-----~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~ 254 (304)
..+.++.|..+||.++...-..+.++...+.|..+ .++++.++|+ .. .|++ +..+ +.. .-+.++.+
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~~i~~~~vdi~~~~~~el~~~~g-~~---vP~l--~~~g--~~~-~~~g~~~~ 85 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKDRFILQEVDITLPENSTWYERYK-FD---IPVF--HLNG--QFL-MMHRVNTS 85 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSSSSEEEEEETTSSTTHHHHHHSS-SS---CSEE--EESS--SEE-EESSCCHH
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhhCCeEEEEECCCcchHHHHHHHC-CC---CCEE--EECC--EEE-EecCCCHH
Confidence 34577789999999876665555544455666532 4678999999 75 9975 3444 333 34558899
Q ss_pred HHHHHHhcCC
Q 021976 255 AIANFVTHTK 264 (304)
Q Consensus 255 ~i~~fi~~~~ 264 (304)
.|.+||.+..
T Consensus 86 ~l~~~l~~~~ 95 (100)
T 1wjk_A 86 KLEKQLRKLS 95 (100)
T ss_dssp HHHHHHHSSS
T ss_pred HHHHHHHHHH
Confidence 9999998653
No 447
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=95.01 E-value=0.11 Score=38.11 Aligned_cols=79 Identities=6% Similarity=0.071 Sum_probs=49.5
Q ss_pred CCeEEEEEecCCCCccHHHHHH------Hh-ccC-CceeEEEe---cCHHH------------------------HhhcC
Q 021976 180 ESKLVLGFLHDLEGMESEELAA------AS-KLH-SDVNFYQT---TSADV------------------------AEFFH 224 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~~------~a-~~~-~~~~f~~~---~~~~l------------------------~~~~~ 224 (304)
+++++|.|+.+||.++...+.. +. .+. ..+.+..+ .+++. .+.|+
T Consensus 27 gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (142)
T 3ewl_A 27 AQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLYD 106 (142)
T ss_dssp CSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHcC
Confidence 5688888999999986665222 22 121 23444432 22222 33788
Q ss_pred CCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhcCC
Q 021976 225 IHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (304)
Q Consensus 225 i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 264 (304)
+.. .|+++++.+++. ..+ +..+.++|.++|.+..
T Consensus 107 v~~---~P~~~lid~~G~--i~~-~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 107 IRA---TPTIYLLDGRKR--VIL-KDTSMEQLIDYLATQA 140 (142)
T ss_dssp CCS---SSEEEEECTTCB--EEE-CSCCHHHHHHHHHC--
T ss_pred CCC---CCeEEEECCCCC--EEe-cCCCHHHHHHHHHHHc
Confidence 886 999999976642 233 4578999999998653
No 448
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=94.92 E-value=0.06 Score=40.60 Aligned_cols=80 Identities=15% Similarity=0.119 Sum_probs=53.7
Q ss_pred CCeEEEEEecCCCCc-cHHHHHH---Hh-ccC-----CceeEEEe-cCH------------------------------H
Q 021976 180 ESKLVLGFLHDLEGM-ESEELAA---AS-KLH-----SDVNFYQT-TSA------------------------------D 218 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~-~~~~~~~---~a-~~~-----~~~~f~~~-~~~------------------------------~ 218 (304)
.++++|.|+.+||.+ +...+.. +. .+. .++.+..+ .++ +
T Consensus 23 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 102 (164)
T 2ggt_A 23 GQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQ 102 (164)
T ss_dssp TCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHHH
T ss_pred CCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 567888899999997 6444433 22 222 24544432 221 3
Q ss_pred HHhhcCCCCCCCCC---------------eEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 219 VAEFFHIHPKSKRP---------------ALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 219 l~~~~~i~~~~~~P---------------~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
+.+.|++.. .| +++++.+.+.....+.|..+.++|.+.|.+
T Consensus 103 ~~~~~~v~~---~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 158 (164)
T 2ggt_A 103 VARAYRVYY---SPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIAT 158 (164)
T ss_dssp HHHTTTCCE---EEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHH
T ss_pred HHHhcCeEE---EecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHH
Confidence 788899875 66 788888777677778888888888888764
No 449
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=94.91 E-value=0.085 Score=39.45 Aligned_cols=75 Identities=11% Similarity=0.110 Sum_probs=49.8
Q ss_pred CCeEEEEEecCCCCccHHHHHH---Hh-ccCCc-eeEEEe---cCH-----------------------HHHhhcCCCCC
Q 021976 180 ESKLVLGFLHDLEGMESEELAA---AS-KLHSD-VNFYQT---TSA-----------------------DVAEFFHIHPK 228 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~~---~a-~~~~~-~~f~~~---~~~-----------------------~l~~~~~i~~~ 228 (304)
+++++|.|+.+||.++...+.. +. ++.++ +.+..+ ... ++.+.|++..
T Consensus 35 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~- 113 (152)
T 2lrt_A 35 GKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTN- 113 (152)
T ss_dssp GSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS-
T ss_pred CCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCccc-
Confidence 4678888999999886544433 32 23322 444432 122 2889999986
Q ss_pred CCCCeEEEEecCCCceecccCCCCHHHHH
Q 021976 229 SKRPALIFLHLEAGKATPFRHQFTRLAIA 257 (304)
Q Consensus 229 ~~~P~lv~~~~~~~~~~~y~g~~~~~~i~ 257 (304)
.|+++++.+++.....+.|..+.++..
T Consensus 114 --~P~~~lid~~G~i~~~~~g~~~~e~~~ 140 (152)
T 2lrt_A 114 --LPSVFLVNRNNELSARGENIKDLDEAI 140 (152)
T ss_dssp --CSEEEEEETTTEEEEETTTCSCHHHHH
T ss_pred --CceEEEECCCCeEEEecCCHHHHHHHH
Confidence 999999987776677778877665443
No 450
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=94.76 E-value=0.078 Score=41.13 Aligned_cols=80 Identities=14% Similarity=0.143 Sum_probs=49.4
Q ss_pred CCeEEEEEecCCCCcc---HHHHHHHh-ccCCceeEEEe--------------------------------cCHHHHhhc
Q 021976 180 ESKLVLGFLHDLEGME---SEELAAAS-KLHSDVNFYQT--------------------------------TSADVAEFF 223 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~---~~~~~~~a-~~~~~~~f~~~--------------------------------~~~~l~~~~ 223 (304)
.+.++|.|+.+||.++ ...+.++. ++..++.+..+ .+.++.+.|
T Consensus 33 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 112 (188)
T 2cvb_A 33 EPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKAY 112 (188)
T ss_dssp SSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHHT
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHHc
Confidence 4678888888898763 33444444 34333444432 244688999
Q ss_pred CCCCCCCCCeEEEEecCCCceec--------ccCCCCHHHHHHHHhc
Q 021976 224 HIHPKSKRPALIFLHLEAGKATP--------FRHQFTRLAIANFVTH 262 (304)
Q Consensus 224 ~i~~~~~~P~lv~~~~~~~~~~~--------y~g~~~~~~i~~fi~~ 262 (304)
++.. .|+++++.+++..... +.|..+.++|.+.|++
T Consensus 113 ~v~~---~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ 156 (188)
T 2cvb_A 113 RALR---TPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEA 156 (188)
T ss_dssp TCCE---ESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHH
T ss_pred CCCC---CCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHH
Confidence 9986 8999999766533222 1233356777777774
No 451
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=94.68 E-value=0.1 Score=38.27 Aligned_cols=77 Identities=8% Similarity=0.093 Sum_probs=48.0
Q ss_pred CCeEEEEEecCCCCccHHHHHHHhc-------c-CCceeEEEe---cCH------------------------HHHhhcC
Q 021976 180 ESKLVLGFLHDLEGMESEELAAASK-------L-HSDVNFYQT---TSA------------------------DVAEFFH 224 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~~~a~-------~-~~~~~f~~~---~~~------------------------~l~~~~~ 224 (304)
.+.++|.|+.+||.++...+..+.+ + ..++.+..+ .+. .+.+.|+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 4678888999999886544333222 2 233444432 111 1477888
Q ss_pred CCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 225 IHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 225 i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
+.. .|+++++.+++. ..+.+ .+.+.|.+||++
T Consensus 111 v~~---~P~~~lid~~G~--i~~~~-~~~~~l~~~l~e 142 (142)
T 3eur_A 111 LRA---IPTLYLLDKNKT--VLLKD-ATLQKVEQYLAE 142 (142)
T ss_dssp CTT---CSEEEEECTTCB--EEEEE-ECHHHHHHHHHC
T ss_pred CCc---CCeEEEECCCCc--EEecC-CCHHHHHHHHhC
Confidence 886 999999987653 33332 357889998864
No 452
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=94.06 E-value=0.28 Score=37.76 Aligned_cols=83 Identities=8% Similarity=0.066 Sum_probs=51.9
Q ss_pred CCeEEEEEecCCCCccHHHHHH---Hh-ccC-CceeEEEe---cC-----HHHHhhcCCCC-------------------
Q 021976 180 ESKLVLGFLHDLEGMESEELAA---AS-KLH-SDVNFYQT---TS-----ADVAEFFHIHP------------------- 227 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~~---~a-~~~-~~~~f~~~---~~-----~~l~~~~~i~~------------------- 227 (304)
.+.++|.|+.+||.++...... +. .+. .++.+..+ .+ .++.+++++..
T Consensus 60 gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 139 (186)
T 1jfu_A 60 GKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIG 139 (186)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTT
T ss_pred CCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhcccc
Confidence 4578888889999875444333 33 232 34544432 12 34566666630
Q ss_pred -CCCCCeEEEEecCCCceecccCCC--CHHHHHHHHhc
Q 021976 228 -KSKRPALIFLHLEAGKATPFRHQF--TRLAIANFVTH 262 (304)
Q Consensus 228 -~~~~P~lv~~~~~~~~~~~y~g~~--~~~~i~~fi~~ 262 (304)
....|+++++.+++.....+.|.. +.+++.++|++
T Consensus 140 ~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ 177 (186)
T 1jfu_A 140 RALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRA 177 (186)
T ss_dssp CCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHH
Confidence 014899999987776667777765 46888888875
No 453
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=93.97 E-value=0.24 Score=35.65 Aligned_cols=62 Identities=8% Similarity=0.014 Sum_probs=37.8
Q ss_pred EEEEEEcCCChhhhhhHHHHHHHHHHhh-CCcEEEEEeCcccH----HHHHhC--------CCccccEEEEEeCCeEE
Q 021976 76 VMVMFYANWCYWSKKLAPEFAAAAKMLK-GEADLVMVDAYLEK----DLAKEY--------NILAYPTLYLFVAGVRQ 140 (304)
Q Consensus 76 ~lv~f~a~wC~~C~~~~~~~~~~~~~~~-~~~~~~~vd~~~~~----~~~~~~--------~v~~~Pt~~~~~~g~~~ 140 (304)
+++.|.+++|+.|+-... =.++..-++ .+|.|-.+|++.++ ++.++. |...+|.+++ +|..+
T Consensus 1 ~V~vYtt~~c~~c~~kk~-c~~aK~lL~~kgV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi--~~~~i 75 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKK-QQDVLGFLEANKIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIFN--ESQYR 75 (121)
T ss_dssp CEEEEECTTCSCHHHHHH-HHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEEE--TTEEE
T ss_pred CEEEEecCCCCCccchHH-HHHHHHHHHHCCCceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEEEE--CCEEE
Confidence 366788999999941110 011111122 27899999998764 355566 7778887654 77433
No 454
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=93.95 E-value=0.041 Score=47.58 Aligned_cols=69 Identities=12% Similarity=0.213 Sum_probs=39.9
Q ss_pred HHHHhcCCCcEEEEEEcCCChhhhhhHH-HHHHHHHHhhCCcEEEEEeC-ccc----HHHHHhCCCccccEEEEEeCCeE
Q 021976 66 FSEFMGKNRNVMVMFYANWCYWSKKLAP-EFAAAAKMLKGEADLVMVDA-YLE----KDLAKEYNILAYPTLYLFVAGVR 139 (304)
Q Consensus 66 ~~~~~~~~~~~lv~f~a~wC~~C~~~~~-~~~~~~~~~~~~~~~~~vd~-~~~----~~~~~~~~v~~~Pt~~~~~~g~~ 139 (304)
++++++.++ ++.|..+||++|++... .+++..-.+. .+.+..+|- +++ ..+.+..|...+|++++ +|+.
T Consensus 254 V~~lI~~~~--VvVYsk~~CPyC~~Ak~~LL~~~gV~y~-eidVlEld~~~~~~e~~~~L~~~tG~~TVPqVFI--~Gk~ 328 (362)
T 2jad_A 254 VKDLIAENE--IFVASKTYCPYSHAALNTLFEKLKVPRS-KVLVLQLNDMKEGADIQAALYEINGQRTVPNIYI--NGKH 328 (362)
T ss_dssp HHHHHHTCS--EEEEECTTCHHHHHHHHHHHTTTCCCTT-TEEEEEGGGSTTHHHHHHHHHHHHCCCSSCEEEE--TTEE
T ss_pred HHHHhccCC--EEEEEcCCCcchHHHHHHHHHHcCCCcc-eEEEEEeccccCCHHHHHHHHHHHCCCCcCEEEE--CCEE
Confidence 344555444 55588999999998764 3444332222 233333332 222 33455679999999754 7853
No 455
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=93.89 E-value=0.095 Score=37.61 Aligned_cols=67 Identities=18% Similarity=0.300 Sum_probs=43.7
Q ss_pred hhcHHHHhcCCCcEEEEEEc-----CCChhhhhhHHHHHHHHHHhhCCc-EEEEEeCcccHHHH----HhCCCccccEEE
Q 021976 63 GKNFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEA-DLVMVDAYLEKDLA----KEYNILAYPTLY 132 (304)
Q Consensus 63 ~~~~~~~~~~~~~~lv~f~a-----~wC~~C~~~~~~~~~~~~~~~~~~-~~~~vd~~~~~~~~----~~~~v~~~Pt~~ 132 (304)
.+..++.++++++ +| |.- |.|++|++....+.+. ++ .+..+|.+.++++. +.-|-+.+|.++
T Consensus 10 ~e~i~~~i~~~~V-vv-F~Kgt~~~P~C~fc~~ak~lL~~~------gv~~~~~~~v~~~~~~r~~l~~~sg~~TvPqIF 81 (118)
T 2wul_A 10 AEQLDALVKKDKV-VV-FLKGTPEQPQCGFSNAVVQILRLH------GVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVY 81 (118)
T ss_dssp HHHHHHHHHHSSE-EE-EESBCSSSBSSHHHHHHHHHHHHT------TCCSCEEEETTSCHHHHHHHHHHHTCCSSCEEE
T ss_pred HHHHHHHHhcCCE-EE-EEcCCCCCCCCHHHHHHHHHHHHh------CCcCeEeecccCCHHHHHHHHHhccCCCCCeEe
Confidence 4567777766653 33 432 5799999987666432 34 37778888776543 344777889885
Q ss_pred EEeCCeE
Q 021976 133 LFVAGVR 139 (304)
Q Consensus 133 ~~~~g~~ 139 (304)
+ +|+-
T Consensus 82 I--~g~~ 86 (118)
T 2wul_A 82 L--NGEF 86 (118)
T ss_dssp E--TTEE
T ss_pred E--CCEE
Confidence 5 8843
No 456
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=93.73 E-value=0.15 Score=38.70 Aligned_cols=82 Identities=13% Similarity=0.060 Sum_probs=53.8
Q ss_pred CCeEEEEEecCCCCc-cHHHHHH---Hh-ccCC----ceeEEEec-C------------------------------HHH
Q 021976 180 ESKLVLGFLHDLEGM-ESEELAA---AS-KLHS----DVNFYQTT-S------------------------------ADV 219 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~-~~~~~~~---~a-~~~~----~~~f~~~~-~------------------------------~~l 219 (304)
.++++|.|+.+||.+ +...+.. +. ++.. ++.+..++ + .++
T Consensus 35 gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~~ 114 (172)
T 2k6v_A 35 DKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVREA 114 (172)
T ss_dssp TSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHHH
T ss_pred CCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHHH
Confidence 568888899999997 6555444 33 2332 45555432 1 256
Q ss_pred HhhcCCCC------------CCCCCeEEEEecCCCceecccCCC--CHHHHHHHHhc
Q 021976 220 AEFFHIHP------------KSKRPALIFLHLEAGKATPFRHQF--TRLAIANFVTH 262 (304)
Q Consensus 220 ~~~~~i~~------------~~~~P~lv~~~~~~~~~~~y~g~~--~~~~i~~fi~~ 262 (304)
++.|++.. -...|+++++. ++.....+.|.. +.++|.+.|++
T Consensus 115 ~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~ 170 (172)
T 2k6v_A 115 AQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQA 170 (172)
T ss_dssp HHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHH
T ss_pred HHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHH
Confidence 66666420 01379999999 765666777776 88999998875
No 457
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=93.72 E-value=0.097 Score=40.76 Aligned_cols=42 Identities=10% Similarity=0.086 Sum_probs=34.1
Q ss_pred CCCcEEEEEEcCCChhhhhhHHHHHHHHHHh-hCCcEEEEEeC
Q 021976 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKML-KGEADLVMVDA 113 (304)
Q Consensus 72 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~~vd~ 113 (304)
+.++++|.|....||+|+++.+.+.++.+++ .+++.+.-.+.
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~~ 55 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRLQ 55 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEEC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEEc
Confidence 4678899999999999999999998877666 55777776654
No 458
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=93.10 E-value=0.075 Score=44.07 Aligned_cols=28 Identities=11% Similarity=0.199 Sum_probs=24.1
Q ss_pred CCcEEEEEEcCCChhhhhhHHHHHHHHH
Q 021976 73 NRNVMVMFYANWCYWSKKLAPEFAAAAK 100 (304)
Q Consensus 73 ~~~~lv~f~a~wC~~C~~~~~~~~~~~~ 100 (304)
++.+++.|+.+.||+|+++++.+++..+
T Consensus 147 gk~~I~vFtDp~CPYCkkl~~~l~~~l~ 174 (273)
T 3tdg_A 147 KDKILYIVSDPMCPHCQKELTKLRDHLK 174 (273)
T ss_dssp TTCEEEEEECTTCHHHHHHHHTHHHHHH
T ss_pred CCeEEEEEECcCChhHHHHHHHHHHHhh
Confidence 4678999999999999999998886543
No 459
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=92.97 E-value=0.13 Score=40.59 Aligned_cols=81 Identities=11% Similarity=0.118 Sum_probs=40.7
Q ss_pred cHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHHHH------Hh-CCCceec----CCHHHHHHhh--ccCCe
Q 021976 116 EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVRE------KM-TLGTYSI----TTTDEAERIL--TVESK 182 (304)
Q Consensus 116 ~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~------~~-~~~~~~l----~~~~~~~~~~--~~~~~ 182 (304)
+...++.+||+++|++++ +|+......+. +.+.+.+|+++ .+ ..++..- ..-.++..+. ...++
T Consensus 39 ~~~~a~~~gi~gvP~fvi--ngk~~~~~~~~-~~~~~~~f~~~~~~l~~~L~s~~~p~~~~~~~~g~~y~~l~~p~~~~~ 115 (197)
T 1un2_A 39 QEKAAADVQLRGVPAMFV--NGKYQLNPQGM-DTSNMDVFVQQYADTVKYLSEKKGGGTGAQYEDGKQYTTLEKPVAGAP 115 (197)
T ss_dssp HHHHHHHTTCCSSSEEEE--TTTEEECGGGS-CCSSHHHHHHHHHHHHHHHTC---------CCBTTTEEECSSCCTTCC
T ss_pred HHHHHHHcCCCcCCEEEE--cceEecCcccc-ccccHHHHHHHHHHHHHHHHhCcccccccccCCCCCceEccCCCCCCC
Confidence 445688999999999866 77544432232 22222222222 21 1111110 0000111111 12457
Q ss_pred EEEEEecCCCCccHHHH
Q 021976 183 LVLGFLHDLEGMESEEL 199 (304)
Q Consensus 183 ~~v~f~~~~~~~~~~~~ 199 (304)
.+|-||+.||+++...-
T Consensus 116 ~vveFf~~~C~~C~~~~ 132 (197)
T 1un2_A 116 QVLEFFSFFCPHCYQFE 132 (197)
T ss_dssp SEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCChhHHHhC
Confidence 88999999999876554
No 460
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=92.91 E-value=0.46 Score=34.05 Aligned_cols=43 Identities=16% Similarity=0.059 Sum_probs=30.4
Q ss_pred EEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCcccH-------HHHHhCCC
Q 021976 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEK-------DLAKEYNI 125 (304)
Q Consensus 77 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-------~~~~~~~v 125 (304)
++.|+.++|+.|++....+++. ++.+-.+|+.+++ ++.+++|+
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~------gi~y~~~di~~~~~~~~~l~~~~~~~g~ 56 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH------GIDYTFHDYKKEGLDAETLDRFLKTVPW 56 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------TCCEEEEEHHHHCCCHHHHHHHHHHSCG
T ss_pred EEEEECCCChHHHHHHHHHHHc------CCcEEEEeeeCCCCCHHHHHHHHHHcCh
Confidence 5678889999999988777652 5667777776443 34566663
No 461
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=92.84 E-value=0.34 Score=35.42 Aligned_cols=77 Identities=6% Similarity=0.081 Sum_probs=49.0
Q ss_pred CCeEEEEEecCCCCccHHHHHHHh----ccCC-ceeEEEe-c----------------------------CHHHHhhcCC
Q 021976 180 ESKLVLGFLHDLEGMESEELAAAS----KLHS-DVNFYQT-T----------------------------SADVAEFFHI 225 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~~~a----~~~~-~~~f~~~-~----------------------------~~~l~~~~~i 225 (304)
.++++|.|+.+||.++...+..+. ++.+ ++.+..+ . +.++.+.|++
T Consensus 32 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 111 (143)
T 4fo5_A 32 GRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYDL 111 (143)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTTG
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcCC
Confidence 467888899999998766644443 2322 2444322 1 1357788999
Q ss_pred CCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 226 HPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 226 ~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
.. .|+.+++.+++...... .+.+++.+.+.+
T Consensus 112 ~~---~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ 142 (143)
T 4fo5_A 112 RK---GFKNFLINDEGVIIAAN---VTPEKLTEILKA 142 (143)
T ss_dssp GG---CCCEEEECTTSBEEEES---CCHHHHHHHHTC
T ss_pred CC---CCcEEEECCCCEEEEcc---CCHHHHHHHHHh
Confidence 86 99999998665332222 356778777753
No 462
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=92.69 E-value=0.38 Score=37.50 Aligned_cols=82 Identities=10% Similarity=0.023 Sum_probs=53.2
Q ss_pred CCeEEEEEe-cCCCCccHHHHHHHh----ccCC-ceeEEEe----------------------------cCHHHHhhcCC
Q 021976 180 ESKLVLGFL-HDLEGMESEELAAAS----KLHS-DVNFYQT----------------------------TSADVAEFFHI 225 (304)
Q Consensus 180 ~~~~~v~f~-~~~~~~~~~~~~~~a----~~~~-~~~f~~~----------------------------~~~~l~~~~~i 225 (304)
.++++|.|+ .+||.++...+..+. ++.. ++.+..+ .+.++.+.|++
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 124 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGV 124 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTC
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCC
Confidence 457888888 899988655544332 2222 2333321 24467888888
Q ss_pred C-----CCCCCCeEEEEecCCCceecccCCC----CHHHHHHHHhcCC
Q 021976 226 H-----PKSKRPALIFLHLEAGKATPFRHQF----TRLAIANFVTHTK 264 (304)
Q Consensus 226 ~-----~~~~~P~lv~~~~~~~~~~~y~g~~----~~~~i~~fi~~~~ 264 (304)
. . .|+++++.+++.....+.|.. +.++|.++|.+..
T Consensus 125 ~~~~g~~---~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 169 (195)
T 2bmx_A 125 LNADGVA---DRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQ 169 (195)
T ss_dssp BCTTSSB---CEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred cccCCCc---cceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 7 5 899999987765555565543 6788888888643
No 463
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=92.66 E-value=0.49 Score=35.80 Aligned_cols=58 Identities=12% Similarity=0.103 Sum_probs=40.8
Q ss_pred CCeEEEEEecCCCCccHHHHH---HHh-ccCC--ceeEEEe---cC------------------------HHHHhhcCCC
Q 021976 180 ESKLVLGFLHDLEGMESEELA---AAS-KLHS--DVNFYQT---TS------------------------ADVAEFFHIH 226 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~~---~~a-~~~~--~~~f~~~---~~------------------------~~l~~~~~i~ 226 (304)
.++++|.|+.+||.++.+... +++ .+.+ ++.+..+ .+ .++++.|++.
T Consensus 48 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 127 (165)
T 3s9f_A 48 GKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVE 127 (165)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCC
Confidence 568888999999998655443 333 3333 4554432 22 5789999999
Q ss_pred CCCCCCeEEEEecC
Q 021976 227 PKSKRPALIFLHLE 240 (304)
Q Consensus 227 ~~~~~P~lv~~~~~ 240 (304)
. .|++++++++
T Consensus 128 ~---~Pt~~lid~~ 138 (165)
T 3s9f_A 128 S---IPTLIGLNAD 138 (165)
T ss_dssp S---SSEEEEEETT
T ss_pred C---CCEEEEEeCC
Confidence 6 9999999875
No 464
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=92.37 E-value=0.52 Score=34.55 Aligned_cols=59 Identities=12% Similarity=0.093 Sum_probs=40.5
Q ss_pred CCeEEEEEecCCCCccHHHH---HHHh-ccC--CceeEEEe--c-------------------------CHHHHhhcCCC
Q 021976 180 ESKLVLGFLHDLEGMESEEL---AAAS-KLH--SDVNFYQT--T-------------------------SADVAEFFHIH 226 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~---~~~a-~~~--~~~~f~~~--~-------------------------~~~l~~~~~i~ 226 (304)
++.++|.|+.+||.++.... .+++ .+. .++.+..+ . +.++++.|++.
T Consensus 28 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (146)
T 1o8x_A 28 GKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVE 107 (146)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCC
T ss_pred CCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCCC
Confidence 56888999999999864443 3333 343 35554432 1 24689999998
Q ss_pred CCCCCCeEEEEe-cCC
Q 021976 227 PKSKRPALIFLH-LEA 241 (304)
Q Consensus 227 ~~~~~P~lv~~~-~~~ 241 (304)
. .|++++++ +++
T Consensus 108 ~---~Pt~~lid~~~G 120 (146)
T 1o8x_A 108 S---IPTLIGVDADSG 120 (146)
T ss_dssp S---SSEEEEEETTTC
T ss_pred C---CCEEEEEECCCC
Confidence 6 99999998 554
No 465
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=92.28 E-value=0.53 Score=34.35 Aligned_cols=59 Identities=7% Similarity=-0.038 Sum_probs=40.5
Q ss_pred CCeEEEEEecCCCCccHHHH---HHHh-ccC--CceeEEEe--c-------------------------CHHHHhhcCCC
Q 021976 180 ESKLVLGFLHDLEGMESEEL---AAAS-KLH--SDVNFYQT--T-------------------------SADVAEFFHIH 226 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~---~~~a-~~~--~~~~f~~~--~-------------------------~~~l~~~~~i~ 226 (304)
+++++|.|+.+||.++.... .+++ .+. .++.+..+ . +.++++.|++.
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (144)
T 1i5g_A 28 GKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVK 107 (144)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCCC
Confidence 56888999999999864443 3333 343 35554432 1 24689999998
Q ss_pred CCCCCCeEEEEe-cCC
Q 021976 227 PKSKRPALIFLH-LEA 241 (304)
Q Consensus 227 ~~~~~P~lv~~~-~~~ 241 (304)
. .|+++++. +++
T Consensus 108 ~---~P~~~lid~~~G 120 (144)
T 1i5g_A 108 S---IPTLVGVEADSG 120 (144)
T ss_dssp S---SSEEEEEETTTC
T ss_pred C---CCEEEEEECCCC
Confidence 6 99999998 554
No 466
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=92.26 E-value=0.53 Score=34.30 Aligned_cols=59 Identities=15% Similarity=0.116 Sum_probs=40.2
Q ss_pred CCeEEEEEecCCCCccHHHH---HHHh-ccC--CceeEEEe--c-------------------------CHHHHhhcCCC
Q 021976 180 ESKLVLGFLHDLEGMESEEL---AAAS-KLH--SDVNFYQT--T-------------------------SADVAEFFHIH 226 (304)
Q Consensus 180 ~~~~~v~f~~~~~~~~~~~~---~~~a-~~~--~~~~f~~~--~-------------------------~~~l~~~~~i~ 226 (304)
+++++|.|+.+||.++.... .+++ .+. .++.+..+ . +.++++.|++.
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 107 (144)
T 1o73_A 28 GKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVE 107 (144)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCC
T ss_pred CCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCC
Confidence 56888899999999864443 3333 233 34554432 1 24688999998
Q ss_pred CCCCCCeEEEEe-cCC
Q 021976 227 PKSKRPALIFLH-LEA 241 (304)
Q Consensus 227 ~~~~~P~lv~~~-~~~ 241 (304)
. .|++++++ +++
T Consensus 108 ~---~Pt~~lid~~~G 120 (144)
T 1o73_A 108 S---IPTLITINADTG 120 (144)
T ss_dssp S---SSEEEEEETTTC
T ss_pred C---CCEEEEEECCCC
Confidence 6 99999998 454
No 467
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=91.71 E-value=0.2 Score=46.61 Aligned_cols=68 Identities=19% Similarity=0.214 Sum_probs=44.9
Q ss_pred hcHHHHhcCCCcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCccc---H----HHHHhCCCccccEEEEEeC
Q 021976 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE---K----DLAKEYNILAYPTLYLFVA 136 (304)
Q Consensus 64 ~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~---~----~~~~~~~v~~~Pt~~~~~~ 136 (304)
+.+++.+...+ ++.|..+||++|++....+.+. ++.+-.+|++.. + .+.+..|...+|.+ |-+
T Consensus 9 ~~v~~~i~~~~--v~vy~~~~Cp~C~~~k~~L~~~------~i~~~~~dv~~~~~~~~~~~~l~~~~g~~tvP~v--~i~ 78 (598)
T 2x8g_A 9 QWLRKTVDSAA--VILFSKTTCPYCKKVKDVLAEA------KIKHATIELDQLSNGSAIQKCLASFSKIETVPQM--FVR 78 (598)
T ss_dssp HHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHT------TCCCEEEEGGGSTTHHHHHHHTHHHHSCCCSCEE--EET
T ss_pred HHHHHHhccCC--EEEEECCCChhHHHHHHHHHHC------CCCcEEEEcccCcchHHHHHHHHHHhCCceeCEE--EEC
Confidence 45666665443 5668999999999988877753 344556666542 2 23345688899987 447
Q ss_pred CeEEE
Q 021976 137 GVRQF 141 (304)
Q Consensus 137 g~~~~ 141 (304)
|+.+.
T Consensus 79 g~~ig 83 (598)
T 2x8g_A 79 GKFIG 83 (598)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 75443
No 468
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=91.57 E-value=0.59 Score=37.21 Aligned_cols=76 Identities=16% Similarity=0.202 Sum_probs=47.8
Q ss_pred eEEEEEecCCCCcc---HHHHHHHh-ccCCc-eeEEEe-c-------------------------------CHHHHhhcC
Q 021976 182 KLVLGFLHDLEGME---SEELAAAS-KLHSD-VNFYQT-T-------------------------------SADVAEFFH 224 (304)
Q Consensus 182 ~~~v~f~~~~~~~~---~~~~~~~a-~~~~~-~~f~~~-~-------------------------------~~~l~~~~~ 224 (304)
+++|.|+.+||.++ ...+.++. ++.++ +.+..+ . +.++.+.|+
T Consensus 61 ~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~ 140 (218)
T 3u5r_E 61 ALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYG 140 (218)
T ss_dssp EEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHT
T ss_pred eEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHcC
Confidence 47888888898763 34444443 34332 444432 2 357999999
Q ss_pred CCCCCCCCeEEEEecCCCceecccC-----------CCCHHHHHHHHhc
Q 021976 225 IHPKSKRPALIFLHLEAGKATPFRH-----------QFTRLAIANFVTH 262 (304)
Q Consensus 225 i~~~~~~P~lv~~~~~~~~~~~y~g-----------~~~~~~i~~fi~~ 262 (304)
+.. .|+++++.+++. +.|.| ..+.++|.+.|++
T Consensus 141 v~~---~P~~~liD~~G~--i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ 184 (218)
T 3u5r_E 141 AAC---TPDFFLYDRERR--LVYHGQFDDARPGNGKDVTGADLRAAVDA 184 (218)
T ss_dssp CCE---ESEEEEECTTCB--EEEEECSSSCCTTSCCCCCCHHHHHHHHH
T ss_pred CCC---CCeEEEECCCCc--EEEeccccccccccccccCHHHHHHHHHH
Confidence 986 899999976653 23433 2345677777764
No 469
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=91.41 E-value=0.54 Score=32.75 Aligned_cols=62 Identities=18% Similarity=0.169 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhhC----CcEEEEEeCcccH----------HHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHH
Q 021976 92 APEFAAAAKMLKG----EADLVMVDAYLEK----------DLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWV 156 (304)
Q Consensus 92 ~~~~~~~~~~~~~----~~~~~~vd~~~~~----------~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i 156 (304)
.|++.+++..+.. ++.+.+.|..+++ ++.+++|+...|.+++ +| .+...-...+.+++.+|+
T Consensus 26 d~eL~~~~~~~~~lk~~Gi~V~RyNL~~~P~~F~~N~~V~~~L~~~G~~~LP~~~V--DG-evv~~G~yPt~eEl~~~l 101 (106)
T 3ktb_A 26 NPELMRIAVVIESLKKQGIIVTRHNLRDEPQVYVSNKTVNDFLQKHGADALPITLV--DG-EIAVSQTYPTTKQMSEWT 101 (106)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCEEEETTTCTTHHHHSHHHHHHHHTTCGGGCSEEEE--TT-EEEECSSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCEEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEE--CC-EEEEeccCCCHHHHHHHh
Confidence 5555555544332 7899999998876 5677899999999877 88 444444458889999987
No 470
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=91.11 E-value=0.88 Score=35.17 Aligned_cols=30 Identities=7% Similarity=0.025 Sum_probs=23.5
Q ss_pred eEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 233 ~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
+.+++.+++.....+.|..+.++|.++|.+
T Consensus 153 ~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 182 (190)
T 2vup_A 153 TSFLIDRDGVPVERFSPGASVKDIEKKLIP 182 (190)
T ss_dssp CEEEECTTSCEEEEECTTCCHHHHHHHHHH
T ss_pred eEEEECCCCcEEEEECCCCCHHHHHHHHHH
Confidence 778887777667778888888888888764
No 471
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=91.05 E-value=0.21 Score=39.10 Aligned_cols=44 Identities=2% Similarity=0.073 Sum_probs=32.6
Q ss_pred CHHHHhhcCCC-----CCCCCCeEEEEecCCCceecccCCC----CHHHHHHHHhc
Q 021976 216 SADVAEFFHIH-----PKSKRPALIFLHLEAGKATPFRHQF----TRLAIANFVTH 262 (304)
Q Consensus 216 ~~~l~~~~~i~-----~~~~~P~lv~~~~~~~~~~~y~g~~----~~~~i~~fi~~ 262 (304)
+.++.+.|++. . .|+.+++.+++.....+.|.. +.++|.+.|.+
T Consensus 106 ~~~~~~~~~v~~~~g~~---~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 158 (198)
T 1zof_A 106 TKSISRDYDVLFEEAIA---LRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDA 158 (198)
T ss_dssp TSHHHHHTTCEETTTEE---CEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHH
T ss_pred chHHHHHhCCcccCCcc---cceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 45788899986 5 899999987765555565543 56788888774
No 472
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=90.96 E-value=0.31 Score=37.67 Aligned_cols=47 Identities=9% Similarity=-0.012 Sum_probs=31.4
Q ss_pred CHHHHhhcCCCC---CCCCCeEEEEecCCCceecccCCC----CHHHHHHHHhc
Q 021976 216 SADVAEFFHIHP---KSKRPALIFLHLEAGKATPFRHQF----TRLAIANFVTH 262 (304)
Q Consensus 216 ~~~l~~~~~i~~---~~~~P~lv~~~~~~~~~~~y~g~~----~~~~i~~fi~~ 262 (304)
+.++.+.|++.. +...|+++++.+++.....+.|.. +.++|.+.|++
T Consensus 101 ~~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 154 (187)
T 1we0_A 101 SQTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKA 154 (187)
T ss_dssp TCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHH
T ss_pred chHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 456888899861 002899999977765555555543 56777777764
No 473
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=90.94 E-value=0.37 Score=38.31 Aligned_cols=40 Identities=8% Similarity=0.122 Sum_probs=30.9
Q ss_pred HHHHhhcCCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhcCC
Q 021976 217 ADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (304)
Q Consensus 217 ~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 264 (304)
.++.+.+|+++ -|++++ .++ + .+.|..+.+.|.++|.+..
T Consensus 171 ~~l~~~~gV~g---TPt~vi-~nG--~--~~~G~~~~~~l~~~l~~~~ 210 (211)
T 1t3b_A 171 YELGIQFGVRG---TPSIVT-STG--E--LIGGYLKPADLLRALEETA 210 (211)
T ss_dssp HHHHHHHTCCS---SCEEEC-TTS--C--CCCSCCCHHHHHHHHHHCC
T ss_pred HHHHHHcCCCc---CCEEEE-eCC--E--EecCCCCHHHHHHHHHhcc
Confidence 45778999997 999886 333 2 5778889999999998653
No 474
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=90.56 E-value=0.97 Score=33.59 Aligned_cols=81 Identities=10% Similarity=0.102 Sum_probs=49.7
Q ss_pred eEEEEEe-cCCCCccHHHHHHHh----ccCC-ceeEEEec--------------------------CHHHHhhcCCCCC-
Q 021976 182 KLVLGFL-HDLEGMESEELAAAS----KLHS-DVNFYQTT--------------------------SADVAEFFHIHPK- 228 (304)
Q Consensus 182 ~~~v~f~-~~~~~~~~~~~~~~a----~~~~-~~~f~~~~--------------------------~~~l~~~~~i~~~- 228 (304)
.++|.|+ .+||.++...+..+. ++.. ++.+..++ +.++.+.|++...
T Consensus 38 ~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~~ 117 (160)
T 1xvw_A 38 NVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNEQ 117 (160)
T ss_dssp EEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEETT
T ss_pred CEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCcccc
Confidence 7888887 999998765555443 2322 34443321 5678889998710
Q ss_pred CCCC--eEEEEecCCCceecccCCC----CHHHHHHHHhc
Q 021976 229 SKRP--ALIFLHLEAGKATPFRHQF----TRLAIANFVTH 262 (304)
Q Consensus 229 ~~~P--~lv~~~~~~~~~~~y~g~~----~~~~i~~fi~~ 262 (304)
.+.| +.+++.+++.....+.|.. +.+++.+.|.+
T Consensus 118 ~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 118 AGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp TTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred CCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 0267 7888877765556666654 44666666653
No 475
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=90.41 E-value=0.61 Score=35.33 Aligned_cols=30 Identities=0% Similarity=0.022 Sum_probs=23.3
Q ss_pred eEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 233 ~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
+.+++.+++.....+.|..+.+.|.+.|.+
T Consensus 136 ~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 165 (171)
T 3cmi_A 136 EKFLVDKKGKVYERYSSLTKPSSLSETIEE 165 (171)
T ss_dssp CEEEECSSSCEEEEECTTSCGGGGHHHHHH
T ss_pred eEEEECCCCCEEEEeCCCCCHHHHHHHHHH
Confidence 788887777677778888888888877764
No 476
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=90.32 E-value=0.8 Score=34.33 Aligned_cols=32 Identities=6% Similarity=0.106 Sum_probs=24.7
Q ss_pred CC---eEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 231 RP---ALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 231 ~P---~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
.| +.+++.+++.....+.|..+.++|.++|.+
T Consensus 131 ~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 165 (170)
T 2p5q_A 131 IQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQ 165 (170)
T ss_dssp CCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHH
T ss_pred ccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHH
Confidence 57 788887777667778888888888888775
No 477
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=90.08 E-value=0.24 Score=32.37 Aligned_cols=50 Identities=20% Similarity=0.063 Sum_probs=33.9
Q ss_pred EEEEecCCCCccHHHHHH---Hh-ccCCceeEEEec----CHHHHhhcCCCCCCCCCeEEE
Q 021976 184 VLGFLHDLEGMESEELAA---AS-KLHSDVNFYQTT----SADVAEFFHIHPKSKRPALIF 236 (304)
Q Consensus 184 ~v~f~~~~~~~~~~~~~~---~a-~~~~~~~f~~~~----~~~l~~~~~i~~~~~~P~lv~ 236 (304)
++.|+.+||.++...-.. ++ +...++.+..+. +.++++++|+.. .|++++
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~---vPt~~i 61 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKS---VPALVI 61 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCE---EEEEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCc---CCEEEE
Confidence 567899999886555442 33 233345555543 578899999986 999876
No 478
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=89.52 E-value=2.6 Score=29.51 Aligned_cols=63 Identities=10% Similarity=0.106 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhh---C-CcEEEEEeCcccH----------HHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHHH
Q 021976 92 APEFAAAAKMLK---G-EADLVMVDAYLEK----------DLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVR 157 (304)
Q Consensus 92 ~~~~~~~~~~~~---~-~~~~~~vd~~~~~----------~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~ 157 (304)
.|++.+++..++ + ++.+.+.|..+++ ++.+++|+...|.+++ +|+ +...-...+.+++.+|+.
T Consensus 23 d~~L~~~~~~~~~lk~~Gi~V~RyNL~~~P~aF~~N~~V~~~L~~~G~~~LP~~~V--DGe-vv~~G~yPt~eEl~~~lg 99 (110)
T 3kgk_A 23 DQALVDFSTDVQWLKQSGVQIERFNLAQQPMSFVQNEKVKAFIEASGAEGLPLLLL--DGE-TVMAGRYPKRAELARWFG 99 (110)
T ss_dssp -CHHHHHHHHHHHHHHHTCCEEEEETTTCTTHHHHSHHHHHHHHHHCGGGCCEEEE--TTE-EEEESSCCCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHCCCeEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEE--CCE-EEEeccCCCHHHHHHHhC
Confidence 444544444332 2 7999999998876 5677899999999877 894 444444588999999985
No 479
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=89.47 E-value=0.26 Score=38.28 Aligned_cols=37 Identities=16% Similarity=0.151 Sum_probs=30.5
Q ss_pred HHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHH
Q 021976 118 DLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWV 156 (304)
Q Consensus 118 ~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i 156 (304)
+.++++||+++||+++ +|+......|..+.+++.++|
T Consensus 145 ~~a~~~GV~gtPtf~i--ng~~~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 145 KYARQNGIHVSPTFMI--NGLVQPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp HHHHHHTCCSSSEEEE--TTEECTTCCTTSCHHHHHHHH
T ss_pred HHHHHCCCCccCEEEE--CCEEccCCCCCCCHHHHHHHh
Confidence 5678899999999987 886555577889999988876
No 480
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=88.38 E-value=1.6 Score=32.54 Aligned_cols=32 Identities=3% Similarity=0.025 Sum_probs=24.0
Q ss_pred CCeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 231 RPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 231 ~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
.|+.+++.+++.....+.|..+.+.|.+.|.+
T Consensus 133 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 164 (169)
T 2v1m_A 133 NFSKFLVDRQGQPVKRYSPTTAPYDIEGDIME 164 (169)
T ss_dssp TTCEEEECTTSCEEEEECTTSCGGGGHHHHHH
T ss_pred cceEEEECCCCCEEEEcCCCCCHHHHHHHHHH
Confidence 36888887777677778888777777777764
No 481
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=87.75 E-value=0.26 Score=38.27 Aligned_cols=43 Identities=16% Similarity=0.101 Sum_probs=32.3
Q ss_pred cHHHHHhCCCccccEEEEEeCCeEEEEeeCCCCHHHHHHHHHHHh
Q 021976 116 EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (304)
Q Consensus 116 ~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (304)
+...++++||.++||+++ +|+......|..+.+.+.+.|...+
T Consensus 151 ~~~~a~~~gv~gtPt~~i--ng~~~~~~~g~~~~~~l~~~i~~~l 193 (195)
T 3c7m_A 151 WKASYDVAKIQGVPAYVV--NGKYLIYTKSIKSIDAMADLIRELA 193 (195)
T ss_dssp GGGHHHHHHHHCSSEEEE--TTTEEECGGGCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCccCEEEE--CCEEEeccCCCCCHHHHHHHHHHHH
Confidence 345678899999999765 7754433447889999999988765
No 482
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=87.66 E-value=0.69 Score=36.79 Aligned_cols=39 Identities=13% Similarity=0.127 Sum_probs=29.4
Q ss_pred HHHHhhcCCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 217 ADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 217 ~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
.++.+.+|+++ .|+++ +.++ ..+.|..+.+.|.++|.+.
T Consensus 171 ~~l~~~~gV~g---tPt~v-~~dG----~~~~G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 171 YALGVQLGVSG---TPAVV-LSNG----TLVPGYQPPKEMKEFLDEH 209 (216)
T ss_dssp HHHHHHHTCCS---SSEEE-CTTS----CEEESCCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCc---cCEEE-EcCC----eEecCCCCHHHHHHHHHHh
Confidence 46788999997 99985 4333 2567888899999998753
No 483
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=87.47 E-value=0.11 Score=39.05 Aligned_cols=32 Identities=13% Similarity=0.133 Sum_probs=20.0
Q ss_pred CCCeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 230 KRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 230 ~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
+.|+++++.+++.....+.| .+.+++.+++.+
T Consensus 114 ~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~ 145 (159)
T 2ls5_A 114 GITRNVLIDREGKIVKLTRL-YNEEEFASLVQQ 145 (159)
Confidence 38998888666545555555 455566666553
No 484
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=87.41 E-value=0.6 Score=34.07 Aligned_cols=34 Identities=15% Similarity=0.234 Sum_probs=26.0
Q ss_pred EEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeCccc
Q 021976 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE 116 (304)
Q Consensus 77 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 116 (304)
++.|+.++|+.|++....+++. ++.+-.+|+.++
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~------gi~y~~~di~~~ 36 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEH------EIPFVERNIFSE 36 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCEEEEETTTS
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCceEEEEccCC
Confidence 5678899999999988777652 566777787665
No 485
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=86.96 E-value=1.8 Score=32.23 Aligned_cols=47 Identities=4% Similarity=-0.007 Sum_probs=30.8
Q ss_pred cCHHHHhhcCCCC-CCCCCeEEEEecCCCceecccCCC----CHHHHHHHHh
Q 021976 215 TSADVAEFFHIHP-KSKRPALIFLHLEAGKATPFRHQF----TRLAIANFVT 261 (304)
Q Consensus 215 ~~~~l~~~~~i~~-~~~~P~lv~~~~~~~~~~~y~g~~----~~~~i~~fi~ 261 (304)
.+.++.+.|++.+ ....|+.+++.+++.....+.|.. +.+++.+.|.
T Consensus 94 ~~~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~ 145 (161)
T 3drn_A 94 PDKKIRELYGAKGFILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALK 145 (161)
T ss_dssp TTSHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHH
T ss_pred CcHHHHHHcCCCCcCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHH
Confidence 3567899999872 122799999987776666677732 2345555554
No 486
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=86.50 E-value=2.3 Score=28.15 Aligned_cols=68 Identities=10% Similarity=0.029 Sum_probs=45.0
Q ss_pred EEEEecCCCCccHHHHHHHhccCCceeEEEec------C----HHHHhhcCCCCCCCCCeEEEEecCCCceecccCCCCH
Q 021976 184 VLGFLHDLEGMESEELAAASKLHSDVNFYQTT------S----ADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTR 253 (304)
Q Consensus 184 ~v~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~------~----~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~ 253 (304)
++.|..++|..+.+....+....-.+....+. + +++.+.+++.. .|++++ .+ . .. |.++.
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~---vP~l~~--~g--~--~i-~G~~~ 83 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGSYS---VPVVVK--GD--K--HV-LGYNE 83 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHTCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSC---SCEEEE--TT--E--EE-ESCCH
T ss_pred EEEEECCCChHHHHHHHHHHHcCCCcEEEEeeeCCccchHHHHHHHHHhcCCCC---cCEEEE--CC--E--EE-eCCCH
Confidence 45688899988776666555554555555443 2 56667888775 999875 22 2 22 33689
Q ss_pred HHHHHHHh
Q 021976 254 LAIANFVT 261 (304)
Q Consensus 254 ~~i~~fi~ 261 (304)
+.|.+++.
T Consensus 84 ~~l~~~l~ 91 (92)
T 3ic4_A 84 EKLKELIR 91 (92)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999885
No 487
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=86.46 E-value=1.7 Score=33.19 Aligned_cols=32 Identities=9% Similarity=0.060 Sum_probs=24.1
Q ss_pred CCeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 231 RPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 231 ~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
.|+.+++.+++.....+.|..+.++|.++|++
T Consensus 150 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 181 (183)
T 2obi_A 150 NFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPH 181 (183)
T ss_dssp TTCEEEECTTSCEEEEECTTSCTHHHHTTSGG
T ss_pred cceEEEECCCCCEEEEeCCCCCHHHHHHHHHH
Confidence 47888887777666777887788888877764
No 488
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=86.32 E-value=2.4 Score=32.62 Aligned_cols=44 Identities=9% Similarity=0.123 Sum_probs=30.9
Q ss_pred CHHHHhhcCCC-----CCCCCCeEEEEecCCCceecccCC----CCHHHHHHHHhc
Q 021976 216 SADVAEFFHIH-----PKSKRPALIFLHLEAGKATPFRHQ----FTRLAIANFVTH 262 (304)
Q Consensus 216 ~~~l~~~~~i~-----~~~~~P~lv~~~~~~~~~~~y~g~----~~~~~i~~fi~~ 262 (304)
+.++.+.|++. . .|+++++.+++.....+.|. .+.+++.+.|..
T Consensus 104 ~~~~~~~~gv~~~~g~~---~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 156 (192)
T 2h01_A 104 SKSIARSYDVLFNESVA---LRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDA 156 (192)
T ss_dssp TSHHHHHTTCEETTTEE---CCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHH
T ss_pred cHHHHHHhCCcCcCCce---eeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHH
Confidence 45788899987 5 89999998776554444443 356777777764
No 489
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=86.15 E-value=0.82 Score=38.81 Aligned_cols=157 Identities=14% Similarity=0.039 Sum_probs=93.6
Q ss_pred CcccHHHHHhCCCccccEEEEEeCCeEEEEeeC-CCCHHHHHHHHHHHhCCCceecCCHHHHH----HhhccCCeEEEEE
Q 021976 113 AYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFG-ERTRDVISAWVREKMTLGTYSITTTDEAE----RILTVESKLVLGF 187 (304)
Q Consensus 113 ~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g-~~~~~~l~~~i~~~~~~~~~~l~~~~~~~----~~~~~~~~~~v~f 187 (304)
|+-.+++.++++|.-+|-.+.+. |+.. .+| ..+.+++.+.+++.-..+.+.-.+..++. ++.++.+.++..-
T Consensus 45 ~dL~~e~~~~~~I~vvPL~v~~~-~~~Y--~D~~di~~~efy~~m~~~~~~p~TSqPs~~~~~~~fe~l~~~~~~Ii~I~ 121 (315)
T 3fys_A 45 AYIPKEMREQHQIHMIPLQVVFR-EETY--REEIELDWKSFYEEVKKHNELPTTSQPPIGELVALYEELGKSYDAVISIH 121 (315)
T ss_dssp GCCCHHHHHHHTEEEECCEEECS-SCEE--EBTTTBCHHHHHHHHHTTTCCCEEECCCHHHHHHHHHHHTTTCSEEEEEE
T ss_pred CCCCHHHHHhCCeEEEeEEEEEC-CEEE--ECCCCCCHHHHHHHHHhCCCCcccCCCCHHHHHHHHHHHHhcCCcEEEEe
Confidence 45567889999999999777774 4332 233 58899999999764333333334444444 4444456666656
Q ss_pred ecCCCCccHHHHHHHhccCCceeEEEecCHHHHhhcCCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhcCCCCc
Q 021976 188 LHDLEGMESEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHPL 267 (304)
Q Consensus 188 ~~~~~~~~~~~~~~~a~~~~~~~f~~~~~~~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p~ 267 (304)
++..-+..++....+++...+.++..+.+..+.-..+.- +..- ....=+|..+.++|.+|+++.....
T Consensus 122 iSS~LSGTy~sA~~Aa~~~~~~~I~ViDS~~~s~g~g~l---------v~~A---a~l~~~G~~s~eeI~~~l~~~~~~~ 189 (315)
T 3fys_A 122 LSSGISGTFSSAAAADSMVDNIDVYPFDSEISCLAQGFY---------ALKA---AELIKNGASSPEDIIKELEEMKKTV 189 (315)
T ss_dssp SCTTTCSHHHHHHHGGGGCSSCEEEEEECSSCHHHHHHH---------HHHH---HHHHHTTCCCHHHHHHHHHHHTTTC
T ss_pred CCCcHhHHHHHHHHHHHhCCCCCEEEECCchhHHHHHHH---------HHHH---HHHHHcCCCCHHHHHHHHHHHHhcc
Confidence 666666667766666644333334433332222222210 0000 0011123238899999999988888
Q ss_pred EEeeCccchhhhhcCCC
Q 021976 268 VVTLTIHNAQFVFQDPR 284 (304)
Q Consensus 268 ~~~l~~~~~~~~~~~~~ 284 (304)
-..+..+++..+..++.
T Consensus 190 ~~~f~v~~L~yL~kGGR 206 (315)
T 3fys_A 190 RAYFMVDDLAHLQRGGR 206 (315)
T ss_dssp EEEEECSCTHHHHHHTT
T ss_pred EEEEEECchHHHHhCCc
Confidence 88888888888887654
No 490
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=85.98 E-value=2.2 Score=33.68 Aligned_cols=45 Identities=4% Similarity=0.115 Sum_probs=31.3
Q ss_pred cCHHHHhhcCCC-----CCCCCCeEEEEecCCCceecccCC----CCHHHHHHHHhc
Q 021976 215 TSADVAEFFHIH-----PKSKRPALIFLHLEAGKATPFRHQ----FTRLAIANFVTH 262 (304)
Q Consensus 215 ~~~~l~~~~~i~-----~~~~~P~lv~~~~~~~~~~~y~g~----~~~~~i~~fi~~ 262 (304)
.+.++.+.|++. . .|+.+++.+++.....+.|. .+.+++.+.|..
T Consensus 124 ~~~~~~~~ygv~~~~g~~---~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~ 177 (213)
T 2i81_A 124 ITKSISKDYNVLFDDSVS---LRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDA 177 (213)
T ss_dssp TTSHHHHHTTCEETTTEE---CEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred CchHHHHHhCCccccCCc---ccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 356788899987 4 79999998776544444332 357788887764
No 491
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=85.96 E-value=2.4 Score=33.64 Aligned_cols=44 Identities=5% Similarity=-0.008 Sum_probs=30.5
Q ss_pred CHHHHhhcCCC------CCCCCCeEEEEecCCCceecccCC----CCHHHHHHHHhc
Q 021976 216 SADVAEFFHIH------PKSKRPALIFLHLEAGKATPFRHQ----FTRLAIANFVTH 262 (304)
Q Consensus 216 ~~~l~~~~~i~------~~~~~P~lv~~~~~~~~~~~y~g~----~~~~~i~~fi~~ 262 (304)
+.++.+.|++. . .|+++++.+++.....+.|. .+.+++.+.|+.
T Consensus 129 ~~~i~~~ygv~~~~~g~~---~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~ 182 (220)
T 1zye_A 129 TKQISRDYGVLLEGPGLA---LRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKA 182 (220)
T ss_dssp TSHHHHHTTCEETTTTEE---CEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred cHHHHHHhCCeecCCCcc---cceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 45788899986 5 89999998776444444443 456777777764
No 492
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=85.80 E-value=1.8 Score=35.09 Aligned_cols=43 Identities=7% Similarity=0.063 Sum_probs=32.1
Q ss_pred HHHhhcCCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHHHhcCC
Q 021976 218 DVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (304)
Q Consensus 218 ~l~~~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 264 (304)
++.+.+|+++ .|++++.+.++ +...+.|..+.+.|.++|.+..
T Consensus 190 ~l~~~~gv~g---tPt~vi~~~~G-~~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 190 KLMDDLGANV---TPAIYYMSKEN-TLQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp HHHHHHTCCS---SCEEEEEETTT-EEEEEESSCCHHHHHHHTTC--
T ss_pred HHHHHcCCCC---CCEEEEECCCC-CEEEecCCCCHHHHHHHHHHHH
Confidence 4668889986 99998876433 4456789889999999998643
No 493
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=85.80 E-value=2.1 Score=33.16 Aligned_cols=48 Identities=6% Similarity=-0.057 Sum_probs=31.4
Q ss_pred CHHHHhhcCCCCC---CCCCeEEEEecCCCceecccCC----CCHHHHHHHHhcC
Q 021976 216 SADVAEFFHIHPK---SKRPALIFLHLEAGKATPFRHQ----FTRLAIANFVTHT 263 (304)
Q Consensus 216 ~~~l~~~~~i~~~---~~~P~lv~~~~~~~~~~~y~g~----~~~~~i~~fi~~~ 263 (304)
+.++.+.|++... ...|+.+++.+++.....+.|. .+.+++.+.|...
T Consensus 107 ~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 107 TRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp TCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred cHHHHHHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhc
Confidence 3468888888610 1289999997776555554443 4568888888753
No 494
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=85.92 E-value=0.15 Score=37.20 Aligned_cols=22 Identities=23% Similarity=0.440 Sum_probs=17.9
Q ss_pred HHHHhhcCCCCCCCCCeEEEEecCC
Q 021976 217 ADVAEFFHIHPKSKRPALIFLHLEA 241 (304)
Q Consensus 217 ~~l~~~~~i~~~~~~P~lv~~~~~~ 241 (304)
.++++.|++.. .|+++++++++
T Consensus 98 ~~~~~~~~v~~---~P~~~lid~~G 119 (143)
T 2lus_A 98 SNVTAKYGITG---IPALVIVKKDG 119 (143)
Confidence 36888999986 99999998554
No 495
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=85.66 E-value=4 Score=25.50 Aligned_cols=68 Identities=7% Similarity=-0.004 Sum_probs=42.2
Q ss_pred EEEEecCCCCccHHHHHHHhccCCceeEEEe-cCHHHHh---hcCCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHH
Q 021976 184 VLGFLHDLEGMESEELAAASKLHSDVNFYQT-TSADVAE---FFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANF 259 (304)
Q Consensus 184 ~v~f~~~~~~~~~~~~~~~a~~~~~~~f~~~-~~~~l~~---~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~f 259 (304)
++.|..+||..+.+....+....-.+....+ .++++.+ .+++.. .|+++. .+ +. ..| ++.+.|.++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~~i~~~~~di~~~~~~~~~~~~~~~~~---vP~l~~--~g--~~--~~g-~~~~~l~~~ 72 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRAGLAYNTVDISLDDEARDYVMALGYVQ---APVVEV--DG--EH--WSG-FRPERIKQL 72 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHHTTCBC---CCEEEE--TT--EE--EES-CCHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHcCCCc---cCEEEE--CC--eE--EcC-CCHHHHHHH
Confidence 4568889998876665555544334444333 3455555 788775 999873 22 32 333 678889888
Q ss_pred Hh
Q 021976 260 VT 261 (304)
Q Consensus 260 i~ 261 (304)
+.
T Consensus 73 l~ 74 (75)
T 1r7h_A 73 QA 74 (75)
T ss_dssp HC
T ss_pred Hh
Confidence 74
No 496
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=85.52 E-value=2.2 Score=33.26 Aligned_cols=45 Identities=2% Similarity=0.094 Sum_probs=27.0
Q ss_pred HHHhhcCCC-CCC------------CCCeEEEEecCCCceecccCCCCHHHHHHHHhc
Q 021976 218 DVAEFFHIH-PKS------------KRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (304)
Q Consensus 218 ~l~~~~~i~-~~~------------~~P~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (304)
++++.|++. ..+ ..|+++++.+.+.....+.|..+.+.+.+.|.+
T Consensus 119 ~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~ 176 (200)
T 2b7k_A 119 NACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVE 176 (200)
T ss_dssp HHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHH
T ss_pred HHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHH
Confidence 467788876 200 124677787777666777777666555555543
No 497
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=85.30 E-value=2.9 Score=28.46 Aligned_cols=60 Identities=12% Similarity=0.110 Sum_probs=37.2
Q ss_pred HHHHHhhccCCeEEEEEecCCCCccHHHHHHHhccCCc---eeEEEec-C-------HHHHhhcCCCCCCCCCeEE
Q 021976 171 DEAERILTVESKLVLGFLHDLEGMESEELAAASKLHSD---VNFYQTT-S-------ADVAEFFHIHPKSKRPALI 235 (304)
Q Consensus 171 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~a~~~~~---~~f~~~~-~-------~~l~~~~~i~~~~~~P~lv 235 (304)
+.+++.+.+.. ++.|..+||+.+.+.-..+...... +.+..+. + ..+.+.+++.. .|+++
T Consensus 3 ~~~~~~i~~~~--v~~f~~~~C~~C~~~~~~L~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~---vP~i~ 73 (105)
T 1kte_A 3 AFVNSKIQPGK--VVVFIKPTCPFCRKTQELLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLTGART---VPRVF 73 (105)
T ss_dssp HHHHHHCCTTC--EEEEECSSCHHHHHHHHHHHHSCBCTTSEEEEEGGGSTTHHHHHHHHHHHHSCCC---SCEEE
T ss_pred hHHHhhcccCC--EEEEEcCCCHhHHHHHHHHHHcCCCCCccEEEEccCCCCHHHHHHHHHHHhCCCC---cCeEE
Confidence 45566665443 5668899999876555444433323 5555443 2 25788899885 99973
No 498
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=85.03 E-value=5.4 Score=30.47 Aligned_cols=31 Identities=6% Similarity=0.011 Sum_probs=24.8
Q ss_pred eEEEEecCCCceecccCCCCHHHHHHHHhcC
Q 021976 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (304)
Q Consensus 233 ~lv~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (304)
+.+++.+++.....+.|..+.++|.+.|.+.
T Consensus 151 ~~~liD~~G~i~~~~~g~~~~~~l~~~i~~l 181 (187)
T 3dwv_A 151 TSFLIDRDGVPVERFSPGASVKDIEEKLIPL 181 (187)
T ss_dssp CEEEECTTSCEEEEECTTCCHHHHHHHHHHH
T ss_pred eEEEECCCCCEEEEECCCCCHHHHHHHHHHH
Confidence 8888887776777888888888888888753
No 499
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=84.27 E-value=2.5 Score=27.15 Aligned_cols=70 Identities=11% Similarity=0.040 Sum_probs=42.2
Q ss_pred EEEEecCCCCccHHHHHHHhccCCceeEEEe-cCHHHHh---hcCCCCCCCCCeEEEEecCCCceecccCCCCHHHHHHH
Q 021976 184 VLGFLHDLEGMESEELAAASKLHSDVNFYQT-TSADVAE---FFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANF 259 (304)
Q Consensus 184 ~v~f~~~~~~~~~~~~~~~a~~~~~~~f~~~-~~~~l~~---~~~i~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~i~~f 259 (304)
++.|..+||.++.+....+....-.+....+ .++++.+ ++++.. .|+++ .++ +. . +..+.+.|.++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~~i~~~~vdi~~~~~~~~~~~~~g~~~---vP~~~--~~g--~~--~-~g~~~~~l~~~ 72 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENRGFDFEMINVDRVPEAAEALRAQGFRQ---LPVVI--AGD--LS--W-SGFRPDMINRL 72 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHHTTCCS---SCEEE--ETT--EE--E-ESCCHHHHGGG
T ss_pred EEEEcCCCChhHHHHHHHHHHCCCCeEEEECCCCHHHHHHHHHhCCCc---cCEEE--ECC--EE--E-ecCCHHHHHHH
Confidence 5668899999876665555444334443333 3455444 477775 99873 333 22 2 23678888888
Q ss_pred HhcC
Q 021976 260 VTHT 263 (304)
Q Consensus 260 i~~~ 263 (304)
+.++
T Consensus 73 l~~~ 76 (81)
T 1h75_A 73 HPAP 76 (81)
T ss_dssp SCCC
T ss_pred Hhcc
Confidence 7654
No 500
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=84.18 E-value=0.77 Score=32.29 Aligned_cols=36 Identities=22% Similarity=0.478 Sum_probs=28.9
Q ss_pred CcEEEEEEcCCChhhhhhHHHHHHHHHHhhCCcEEEEEeC
Q 021976 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA 113 (304)
Q Consensus 74 ~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~ 113 (304)
|.++|.|.-|.|+-|+.....+.++.. +..+.+||+
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~led----eY~ilrVNI 37 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEELKS----EYDILHVDI 37 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTTTT----TEEEEEEEC
T ss_pred CceEEEeCCCccHHHHHHHHHHHHhhc----cccEEEEEe
Confidence 568999999999999998877755444 556888886
Done!