Query 021980
Match_columns 304
No_of_seqs 149 out of 1368
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 07:06:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021980.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021980hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02578 hydrolase 100.0 4.7E-45 1E-49 314.1 32.8 292 2-293 59-353 (354)
2 PLN02824 hydrolase, alpha/beta 100.0 3.1E-41 6.6E-46 284.3 29.9 274 11-294 10-293 (294)
3 PLN02679 hydrolase, alpha/beta 100.0 6E-39 1.3E-43 276.5 28.6 279 12-296 64-358 (360)
4 TIGR02240 PHA_depoly_arom poly 100.0 5E-39 1.1E-43 268.3 23.0 261 11-296 4-267 (276)
5 PRK03592 haloalkane dehalogena 100.0 1.8E-38 3.9E-43 267.6 25.2 274 11-299 9-293 (295)
6 PRK00870 haloalkane dehalogena 100.0 8.6E-38 1.9E-42 264.2 23.9 269 1-295 11-301 (302)
7 PRK03204 haloalkane dehalogena 100.0 3.5E-36 7.6E-41 251.8 26.2 265 10-293 15-286 (286)
8 PRK10349 carboxylesterase BioH 100.0 2.2E-36 4.8E-41 249.7 24.5 248 20-294 3-255 (256)
9 TIGR03343 biphenyl_bphD 2-hydr 100.0 4.3E-36 9.3E-41 251.5 24.7 264 11-294 7-282 (282)
10 KOG4178 Soluble epoxide hydrol 100.0 2.8E-36 6E-41 243.5 19.0 274 12-296 25-321 (322)
11 TIGR03056 bchO_mg_che_rel puta 100.0 2.5E-35 5.5E-40 246.2 24.5 269 8-293 5-278 (278)
12 PRK06489 hypothetical protein; 100.0 1.5E-35 3.3E-40 255.8 23.7 262 15-295 46-357 (360)
13 PLN03084 alpha/beta hydrolase 100.0 4.8E-34 1E-38 245.2 28.4 262 13-294 109-383 (383)
14 PLN03087 BODYGUARD 1 domain co 100.0 4.4E-34 9.6E-39 249.9 26.9 274 12-295 179-479 (481)
15 PLN02965 Probable pheophorbida 100.0 1E-34 2.2E-39 239.5 18.6 242 31-296 5-254 (255)
16 PRK08775 homoserine O-acetyltr 100.0 1.9E-34 4E-39 247.6 16.2 263 12-296 39-340 (343)
17 PRK10673 acyl-CoA esterase; Pr 100.0 2.9E-33 6.3E-38 231.0 22.6 239 28-294 15-254 (255)
18 KOG1454 Predicted hydrolase/ac 100.0 9.6E-34 2.1E-38 238.2 18.2 255 28-296 57-325 (326)
19 KOG4409 Predicted hydrolase/ac 100.0 1E-32 2.3E-37 223.4 22.5 262 28-295 89-364 (365)
20 TIGR03611 RutD pyrimidine util 100.0 9.6E-33 2.1E-37 227.6 22.8 250 21-293 1-256 (257)
21 PRK07581 hypothetical protein; 100.0 2.1E-32 4.5E-37 234.9 24.6 268 15-295 22-336 (339)
22 TIGR01738 bioH putative pimelo 100.0 2.7E-32 5.9E-37 223.0 23.2 240 27-292 1-245 (245)
23 PRK00175 metX homoserine O-ace 100.0 2.7E-32 5.9E-37 236.7 23.3 271 14-298 28-377 (379)
24 TIGR01392 homoserO_Ac_trn homo 100.0 2.1E-32 4.6E-37 235.6 22.0 263 14-293 11-351 (351)
25 PRK11126 2-succinyl-6-hydroxy- 100.0 9.4E-32 2E-36 220.3 23.9 237 29-294 2-241 (242)
26 TIGR02427 protocat_pcaD 3-oxoa 100.0 9.5E-32 2.1E-36 220.5 21.9 246 20-293 1-251 (251)
27 PLN02385 hydrolase; alpha/beta 100.0 4.8E-32 1E-36 233.3 20.6 262 12-297 65-347 (349)
28 PLN02211 methyl indole-3-aceta 100.0 1.8E-31 3.9E-36 221.5 18.3 260 16-296 4-271 (273)
29 TIGR01250 pro_imino_pep_2 prol 100.0 1.8E-30 4E-35 217.4 23.9 263 12-293 5-288 (288)
30 PF12697 Abhydrolase_6: Alpha/ 100.0 6.2E-31 1.3E-35 212.3 20.1 225 32-287 1-228 (228)
31 PRK14875 acetoin dehydrogenase 100.0 3.5E-30 7.5E-35 224.1 24.6 255 12-294 112-370 (371)
32 PLN02894 hydrolase, alpha/beta 100.0 5.1E-30 1.1E-34 223.4 25.0 270 20-296 93-386 (402)
33 PHA02857 monoglyceride lipase; 100.0 4.1E-30 8.8E-35 214.7 22.3 254 12-296 4-274 (276)
34 PRK10749 lysophospholipase L2; 100.0 6.9E-30 1.5E-34 218.1 22.1 266 11-295 33-329 (330)
35 PLN02980 2-oxoglutarate decarb 100.0 4.8E-29 1E-33 247.5 25.8 256 21-297 1360-1641(1655)
36 TIGR01249 pro_imino_pep_1 prol 100.0 1.1E-28 2.3E-33 208.9 23.4 119 11-130 6-130 (306)
37 PLN02298 hydrolase, alpha/beta 100.0 1.4E-28 3E-33 210.5 23.6 257 11-296 35-318 (330)
38 TIGR03695 menH_SHCHC 2-succiny 100.0 1.3E-28 2.9E-33 201.5 22.4 245 29-293 1-251 (251)
39 PRK05855 short chain dehydroge 100.0 3.8E-29 8.3E-34 230.0 21.1 271 12-297 6-294 (582)
40 PLN02511 hydrolase 100.0 1.2E-28 2.7E-33 213.9 20.4 270 13-300 76-370 (388)
41 KOG2984 Predicted hydrolase [G 100.0 3.8E-29 8.3E-34 186.5 12.7 244 12-295 24-276 (277)
42 PRK06765 homoserine O-acetyltr 99.9 1E-25 2.2E-30 194.2 22.8 272 15-294 37-387 (389)
43 PLN02652 hydrolase; alpha/beta 99.9 9.2E-26 2E-30 195.2 22.2 254 13-296 115-388 (395)
44 KOG2382 Predicted alpha/beta h 99.9 6.9E-26 1.5E-30 183.5 18.7 249 28-296 51-314 (315)
45 COG2267 PldB Lysophospholipase 99.9 2E-24 4.4E-29 180.1 22.8 271 4-296 5-295 (298)
46 PRK10985 putative hydrolase; P 99.9 1.3E-23 2.8E-28 178.9 20.6 263 12-295 35-320 (324)
47 PRK05077 frsA fermentation/res 99.9 4.7E-23 1E-27 179.8 22.3 211 31-295 195-412 (414)
48 PF00561 Abhydrolase_1: alpha/ 99.9 7.7E-24 1.7E-28 171.7 15.3 218 56-289 1-229 (230)
49 KOG1455 Lysophospholipase [Lip 99.9 1E-22 2.3E-27 162.5 19.7 257 12-295 31-312 (313)
50 COG1647 Esterase/lipase [Gener 99.9 1.3E-22 2.9E-27 154.2 19.1 220 29-294 15-243 (243)
51 TIGR01607 PST-A Plasmodium sub 99.9 1.3E-22 2.9E-27 172.9 21.2 258 13-293 2-331 (332)
52 TIGR03100 hydr1_PEP hydrolase, 99.9 2.6E-21 5.7E-26 160.8 21.1 225 28-294 25-274 (274)
53 TIGR01838 PHA_synth_I poly(R)- 99.9 3.6E-21 7.8E-26 170.5 22.3 252 29-283 188-463 (532)
54 COG0596 MhpC Predicted hydrola 99.9 4.4E-21 9.6E-26 157.8 20.5 263 14-293 5-280 (282)
55 PRK11071 esterase YqiA; Provis 99.9 7.7E-22 1.7E-26 154.5 14.7 182 30-293 2-189 (190)
56 TIGR01836 PHA_synth_III_C poly 99.9 5E-21 1.1E-25 164.9 20.3 256 29-294 62-349 (350)
57 PLN02872 triacylglycerol lipas 99.9 3.6E-20 7.8E-25 159.9 19.5 282 8-299 44-393 (395)
58 PRK13604 luxD acyl transferase 99.9 6.4E-20 1.4E-24 150.6 19.7 229 13-293 14-257 (307)
59 PRK07868 acyl-CoA synthetase; 99.9 5.3E-20 1.2E-24 177.6 21.3 262 28-297 66-363 (994)
60 PRK10566 esterase; Provisional 99.8 1.6E-19 3.5E-24 148.4 19.4 207 21-294 15-247 (249)
61 COG3208 GrsT Predicted thioest 99.8 7.6E-19 1.7E-23 136.9 19.1 223 28-293 6-234 (244)
62 KOG2564 Predicted acetyltransf 99.8 2.4E-19 5.1E-24 141.0 15.1 116 12-128 51-180 (343)
63 KOG1552 Predicted alpha/beta h 99.8 1.5E-18 3.3E-23 136.1 15.1 191 29-299 60-256 (258)
64 COG0429 Predicted hydrolase of 99.8 1.6E-17 3.4E-22 134.8 15.7 249 29-295 75-340 (345)
65 PF12695 Abhydrolase_5: Alpha/ 99.8 9.8E-18 2.1E-22 126.0 13.3 140 31-275 1-145 (145)
66 TIGR03101 hydr2_PEP hydrolase, 99.8 8.5E-18 1.9E-22 137.3 12.9 101 29-129 25-133 (266)
67 COG2021 MET2 Homoserine acetyl 99.8 2.1E-16 4.5E-21 130.4 20.2 268 15-294 32-367 (368)
68 PF06342 DUF1057: Alpha/beta h 99.7 2.4E-15 5.2E-20 119.8 21.3 107 23-131 25-138 (297)
69 PRK11460 putative hydrolase; P 99.7 8.1E-16 1.7E-20 124.5 15.8 168 29-292 16-209 (232)
70 TIGR03230 lipo_lipase lipoprot 99.7 2.5E-16 5.3E-21 136.2 12.5 105 28-132 40-156 (442)
71 KOG1838 Alpha/beta hydrolase [ 99.7 1.3E-14 2.9E-19 122.2 20.8 259 15-293 100-386 (409)
72 PLN00021 chlorophyllase 99.7 4.4E-15 9.5E-20 124.7 17.8 103 27-129 50-165 (313)
73 PF00975 Thioesterase: Thioest 99.6 8E-15 1.7E-19 118.9 16.1 99 30-130 1-104 (229)
74 PLN02442 S-formylglutathione h 99.6 2.3E-14 4.9E-19 119.6 18.8 114 16-129 27-177 (283)
75 KOG4391 Predicted alpha/beta h 99.6 6.1E-15 1.3E-19 112.1 12.2 215 13-297 59-284 (300)
76 PF03096 Ndr: Ndr family; Int 99.6 3.6E-14 7.8E-19 114.5 17.5 256 14-295 4-279 (283)
77 KOG4667 Predicted esterase [Li 99.6 9.5E-15 2.1E-19 111.0 12.5 218 26-294 30-257 (269)
78 cd00707 Pancreat_lipase_like P 99.6 2.6E-15 5.6E-20 124.3 10.0 115 18-132 24-149 (275)
79 TIGR02821 fghA_ester_D S-formy 99.6 8.1E-14 1.8E-18 116.0 18.6 101 29-129 42-172 (275)
80 KOG2931 Differentiation-relate 99.6 1.4E-12 3E-17 104.0 22.0 257 17-298 30-309 (326)
81 KOG2565 Predicted hydrolases o 99.6 1.2E-14 2.6E-19 119.0 10.3 112 15-126 130-260 (469)
82 TIGR01840 esterase_phb esteras 99.6 1.5E-13 3.2E-18 110.1 15.8 102 28-129 12-129 (212)
83 TIGR01839 PHA_synth_II poly(R) 99.6 7.2E-13 1.6E-17 116.9 21.1 240 29-276 215-482 (560)
84 PF00326 Peptidase_S9: Prolyl 99.5 3.8E-13 8.2E-18 107.9 15.1 187 47-296 5-210 (213)
85 TIGR00976 /NonD putative hydro 99.5 1.1E-12 2.4E-17 119.5 19.8 114 16-130 4-132 (550)
86 TIGR03502 lipase_Pla1_cef extr 99.5 8.6E-14 1.9E-18 127.7 11.6 104 12-115 421-575 (792)
87 PRK10252 entF enterobactin syn 99.5 7.6E-13 1.6E-17 132.7 19.4 102 26-129 1065-1170(1296)
88 COG1506 DAP2 Dipeptidyl aminop 99.5 2.1E-12 4.5E-17 119.0 18.5 224 10-297 367-618 (620)
89 PF10230 DUF2305: Uncharacteri 99.5 4.4E-11 9.5E-16 98.6 23.6 101 30-130 3-122 (266)
90 PF02230 Abhydrolase_2: Phosph 99.5 1.2E-12 2.7E-17 105.0 14.1 171 29-294 14-214 (216)
91 COG0400 Predicted esterase [Ge 99.4 3.3E-12 7.1E-17 100.0 13.5 97 30-128 19-132 (207)
92 TIGR01849 PHB_depoly_PhaZ poly 99.4 2.6E-11 5.6E-16 104.2 19.4 262 30-294 103-405 (406)
93 PRK10162 acetyl esterase; Prov 99.4 2.8E-11 6.1E-16 102.8 16.9 102 29-130 81-195 (318)
94 PF01738 DLH: Dienelactone hyd 99.4 5.6E-11 1.2E-15 95.6 17.8 173 28-294 13-216 (218)
95 PF05448 AXE1: Acetyl xylan es 99.4 1E-10 2.2E-15 98.6 19.9 225 12-294 60-319 (320)
96 PF06821 Ser_hydrolase: Serine 99.4 5.8E-12 1.2E-16 96.4 11.2 153 32-279 1-157 (171)
97 PF06500 DUF1100: Alpha/beta h 99.4 2.8E-11 6E-16 103.1 16.0 206 31-294 191-408 (411)
98 COG3319 Thioesterase domains o 99.4 6.9E-11 1.5E-15 95.5 17.0 100 30-131 1-104 (257)
99 COG3243 PhaC Poly(3-hydroxyalk 99.3 4.7E-10 1E-14 94.5 18.9 268 29-300 107-404 (445)
100 PF07819 PGAP1: PGAP1-like pro 99.3 7.7E-11 1.7E-15 94.5 11.2 102 28-129 3-122 (225)
101 PF12146 Hydrolase_4: Putative 99.2 4E-11 8.7E-16 79.1 7.0 72 18-89 1-78 (79)
102 PF05728 UPF0227: Uncharacteri 99.2 1.9E-09 4.2E-14 83.5 16.6 84 32-129 2-90 (187)
103 PF09752 DUF2048: Uncharacteri 99.2 2.6E-09 5.7E-14 88.8 18.0 234 29-293 92-347 (348)
104 PTZ00472 serine carboxypeptida 99.2 1.5E-08 3.2E-13 90.0 22.6 118 12-129 50-215 (462)
105 COG2945 Predicted hydrolase of 99.2 2.6E-09 5.6E-14 80.5 14.5 151 47-293 51-205 (210)
106 COG4757 Predicted alpha/beta h 99.1 3E-10 6.6E-15 87.7 8.2 229 31-292 32-280 (281)
107 COG3545 Predicted esterase of 99.1 2.2E-09 4.8E-14 79.8 11.8 171 30-294 3-178 (181)
108 COG3458 Acetyl esterase (deace 99.1 2.8E-09 6E-14 84.5 12.9 223 12-295 60-317 (321)
109 PRK10115 protease 2; Provision 99.1 1.7E-08 3.6E-13 94.1 20.0 114 12-129 420-558 (686)
110 PF03959 FSH1: Serine hydrolas 99.1 1.5E-09 3.3E-14 86.7 11.4 48 233-280 158-206 (212)
111 PF02129 Peptidase_S15: X-Pro 99.1 1.6E-08 3.4E-13 84.2 17.7 114 17-131 1-137 (272)
112 PLN02733 phosphatidylcholine-s 99.0 1.4E-09 3E-14 95.1 9.9 120 10-129 69-200 (440)
113 smart00824 PKS_TE Thioesterase 99.0 1.3E-08 2.7E-13 81.1 14.4 94 34-129 2-101 (212)
114 PRK05371 x-prolyl-dipeptidyl a 99.0 2.2E-08 4.8E-13 94.0 17.8 80 50-129 273-372 (767)
115 COG3571 Predicted hydrolase of 99.0 4.3E-08 9.4E-13 71.5 15.1 102 26-127 10-121 (213)
116 PF06028 DUF915: Alpha/beta hy 99.0 3E-08 6.4E-13 80.6 16.0 101 29-129 11-142 (255)
117 COG0412 Dienelactone hydrolase 99.0 4.8E-08 1E-12 79.1 16.5 97 30-127 28-143 (236)
118 PF08538 DUF1749: Protein of u 99.0 3.4E-08 7.4E-13 81.0 15.5 108 19-130 21-148 (303)
119 PF02273 Acyl_transf_2: Acyl t 99.0 5.1E-08 1.1E-12 76.3 14.8 218 17-282 11-243 (294)
120 PF01674 Lipase_2: Lipase (cla 99.0 2.2E-09 4.8E-14 85.0 7.1 85 30-115 2-95 (219)
121 KOG2551 Phospholipase/carboxyh 98.9 9.6E-08 2.1E-12 73.9 14.6 60 233-294 160-219 (230)
122 PF10503 Esterase_phd: Esteras 98.9 4.9E-08 1.1E-12 77.5 12.9 100 30-129 17-131 (220)
123 PF12740 Chlorophyllase2: Chlo 98.9 1.1E-08 2.4E-13 82.3 8.8 103 28-130 16-131 (259)
124 PF06057 VirJ: Bacterial virul 98.8 5.6E-08 1.2E-12 74.0 10.3 97 32-129 5-106 (192)
125 KOG3975 Uncharacterized conser 98.8 2.3E-06 4.9E-11 67.4 18.0 267 12-292 4-300 (301)
126 KOG2624 Triglyceride lipase-ch 98.7 2E-06 4.4E-11 74.1 17.9 119 12-130 52-199 (403)
127 KOG4627 Kynurenine formamidase 98.7 3.3E-07 7.2E-12 69.9 11.3 48 232-279 203-251 (270)
128 PF00151 Lipase: Lipase; Inte 98.7 3.6E-08 7.8E-13 83.5 6.4 105 29-133 71-190 (331)
129 PF07859 Abhydrolase_3: alpha/ 98.7 8.6E-07 1.9E-11 70.8 13.5 92 32-130 1-110 (211)
130 PRK04940 hypothetical protein; 98.6 4.9E-06 1.1E-10 63.4 16.1 83 32-129 2-91 (180)
131 PF07224 Chlorophyllase: Chlor 98.6 1.7E-07 3.8E-12 74.2 7.6 102 29-130 46-157 (307)
132 PF05057 DUF676: Putative seri 98.6 1.9E-07 4.1E-12 74.8 7.3 84 30-114 5-97 (217)
133 PF08840 BAAT_C: BAAT / Acyl-C 98.5 1.5E-07 3.3E-12 75.1 5.9 50 82-132 6-58 (213)
134 PF05990 DUF900: Alpha/beta hy 98.5 5.5E-07 1.2E-11 72.8 8.9 101 28-128 17-135 (233)
135 PF00450 Peptidase_S10: Serine 98.5 1.5E-05 3.3E-10 70.6 18.3 118 12-129 14-180 (415)
136 PF04301 DUF452: Protein of un 98.5 8.2E-06 1.8E-10 64.1 14.3 84 29-135 11-95 (213)
137 COG1075 LipA Predicted acetylt 98.4 9E-07 2E-11 75.6 8.0 98 30-129 60-163 (336)
138 KOG2100 Dipeptidyl aminopeptid 98.4 2.5E-05 5.4E-10 73.6 17.9 224 5-298 494-750 (755)
139 KOG1553 Predicted alpha/beta h 98.4 3E-06 6.5E-11 69.8 9.3 97 28-126 241-341 (517)
140 KOG2112 Lysophospholipase [Lip 98.4 9.8E-06 2.1E-10 62.4 11.4 97 30-126 4-124 (206)
141 PF05677 DUF818: Chlamydia CHL 98.4 2.9E-06 6.3E-11 70.2 8.9 89 28-116 136-236 (365)
142 COG0657 Aes Esterase/lipase [L 98.3 4E-05 8.7E-10 65.2 16.4 102 29-130 79-191 (312)
143 KOG1551 Uncharacterized conser 98.3 3.7E-05 7.9E-10 61.2 14.3 58 239-296 309-367 (371)
144 KOG3043 Predicted hydrolase re 98.3 4.6E-05 9.9E-10 59.4 12.9 113 12-125 21-149 (242)
145 COG3509 LpqC Poly(3-hydroxybut 98.2 1.3E-05 2.7E-10 65.1 10.2 118 13-130 39-179 (312)
146 KOG1515 Arylacetamide deacetyl 98.2 7.5E-05 1.6E-09 63.2 15.4 101 30-131 91-208 (336)
147 KOG3253 Predicted alpha/beta h 98.2 2.3E-05 5E-10 69.3 11.0 160 30-277 177-347 (784)
148 PRK10439 enterobactin/ferric e 98.2 2.1E-05 4.6E-10 69.0 10.7 49 81-129 269-322 (411)
149 PF00756 Esterase: Putative es 98.2 7E-06 1.5E-10 67.4 7.3 49 81-129 98-149 (251)
150 PF12715 Abhydrolase_7: Abhydr 98.1 5E-06 1.1E-10 70.3 6.1 98 29-127 115-257 (390)
151 PF03403 PAF-AH_p_II: Platelet 98.0 1.2E-05 2.6E-10 69.7 6.9 99 30-129 101-261 (379)
152 KOG3724 Negative regulator of 98.0 3.6E-05 7.8E-10 70.1 9.6 97 28-128 88-218 (973)
153 PF08386 Abhydrolase_4: TAP-li 98.0 3.3E-05 7.2E-10 53.9 7.5 61 236-296 34-95 (103)
154 COG4814 Uncharacterized protei 98.0 3E-05 6.5E-10 61.4 7.5 100 30-129 46-175 (288)
155 COG4099 Predicted peptidase [G 98.0 6E-05 1.3E-09 61.1 9.2 35 95-129 269-303 (387)
156 PF11339 DUF3141: Protein of u 98.0 0.00092 2E-08 58.8 16.8 97 29-130 68-175 (581)
157 PF03583 LIP: Secretory lipase 97.9 0.00075 1.6E-08 56.6 14.9 81 47-128 18-111 (290)
158 PF02450 LCAT: Lecithin:choles 97.9 9.3E-05 2E-09 64.7 9.0 78 44-129 66-159 (389)
159 COG4782 Uncharacterized protei 97.8 8.8E-05 1.9E-09 62.1 7.3 86 29-114 116-210 (377)
160 COG2936 Predicted acyl esteras 97.8 0.00064 1.4E-08 60.9 12.6 115 15-129 26-158 (563)
161 PF05577 Peptidase_S28: Serine 97.6 0.00031 6.6E-09 62.7 8.5 100 30-129 29-147 (434)
162 COG4188 Predicted dienelactone 97.6 0.00019 4.1E-09 60.6 6.5 87 31-117 73-181 (365)
163 KOG2281 Dipeptidyl aminopeptid 97.6 0.0022 4.7E-08 57.7 12.9 95 30-124 643-756 (867)
164 PLN02606 palmitoyl-protein thi 97.5 0.00096 2.1E-08 55.2 9.8 99 28-129 25-131 (306)
165 COG3150 Predicted esterase [Ge 97.5 0.00041 9E-09 51.5 6.1 89 32-129 2-90 (191)
166 PF10142 PhoPQ_related: PhoPQ- 97.4 0.0057 1.2E-07 52.6 13.8 62 232-296 258-321 (367)
167 PLN02633 palmitoyl protein thi 97.4 0.0017 3.6E-08 53.8 9.6 99 28-129 24-130 (314)
168 PF05705 DUF829: Eukaryotic pr 97.4 0.026 5.6E-07 46.0 16.4 60 233-292 175-240 (240)
169 cd00741 Lipase Lipase. Lipase 97.3 0.00061 1.3E-08 51.4 6.0 48 83-130 12-67 (153)
170 cd00312 Esterase_lipase Estera 97.3 0.00072 1.6E-08 61.4 6.8 100 29-130 95-213 (493)
171 PF02089 Palm_thioest: Palmito 97.2 0.0018 3.8E-08 53.1 8.0 100 29-129 5-115 (279)
172 PF12048 DUF3530: Protein of u 97.2 0.0081 1.8E-07 50.9 11.5 99 31-129 89-228 (310)
173 KOG2541 Palmitoyl protein thio 97.1 0.0048 1E-07 49.7 9.0 94 30-128 24-126 (296)
174 PF01764 Lipase_3: Lipase (cla 97.1 0.001 2.2E-08 49.2 4.9 33 83-115 52-84 (140)
175 COG0627 Predicted esterase [Ge 97.1 0.002 4.2E-08 54.4 6.8 34 96-129 153-186 (316)
176 PF11187 DUF2974: Protein of u 97.0 0.0018 3.8E-08 52.0 6.1 38 94-131 83-124 (224)
177 PF06441 EHN: Epoxide hydrolas 97.0 0.0013 2.8E-08 46.4 4.4 36 13-48 72-111 (112)
178 PF10340 DUF2424: Protein of u 96.9 0.008 1.7E-07 51.5 8.8 102 30-132 123-237 (374)
179 KOG3847 Phospholipase A2 (plat 96.8 0.0015 3.3E-08 53.7 4.0 39 30-68 119-158 (399)
180 KOG3101 Esterase D [General fu 96.6 0.0017 3.7E-08 50.3 2.5 99 30-128 45-174 (283)
181 KOG4840 Predicted hydrolases o 96.5 0.16 3.4E-06 40.1 12.9 93 30-129 37-143 (299)
182 COG2819 Predicted hydrolase of 96.5 0.005 1.1E-07 49.9 5.0 36 94-129 136-171 (264)
183 COG2272 PnbA Carboxylesterase 96.5 0.014 3E-07 51.4 7.9 101 30-130 95-217 (491)
184 KOG2183 Prolylcarboxypeptidase 96.4 0.024 5.3E-07 48.6 8.7 96 30-127 81-199 (492)
185 cd00519 Lipase_3 Lipase (class 96.4 0.0057 1.2E-07 49.5 4.9 23 94-116 127-149 (229)
186 PLN02517 phosphatidylcholine-s 96.3 0.01 2.3E-07 53.5 6.0 82 43-129 156-262 (642)
187 KOG3967 Uncharacterized conser 96.2 0.047 1E-06 42.6 8.6 102 28-129 100-226 (297)
188 KOG2369 Lecithin:cholesterol a 96.2 0.011 2.4E-07 51.5 5.8 36 93-128 180-223 (473)
189 PLN02162 triacylglycerol lipas 96.1 0.015 3.3E-07 51.0 6.3 32 83-114 266-297 (475)
190 PLN00413 triacylglycerol lipas 96.0 0.018 4E-07 50.6 6.3 33 82-114 271-303 (479)
191 COG2382 Fes Enterochelin ester 96.0 0.033 7.1E-07 46.0 7.1 34 96-129 178-211 (299)
192 PF11144 DUF2920: Protein of u 95.8 0.063 1.4E-06 46.4 8.5 30 96-125 185-214 (403)
193 PF06259 Abhydrolase_8: Alpha/ 95.8 0.031 6.8E-07 42.9 6.1 50 81-130 90-144 (177)
194 KOG4372 Predicted alpha/beta h 95.8 0.0097 2.1E-07 50.9 3.5 80 31-110 82-165 (405)
195 PLN02454 triacylglycerol lipas 95.7 0.018 3.9E-07 50.0 5.0 19 97-115 230-248 (414)
196 PLN02209 serine carboxypeptida 95.7 0.074 1.6E-06 47.3 8.9 58 236-294 351-434 (437)
197 KOG2182 Hydrolytic enzymes of 95.7 0.06 1.3E-06 47.4 8.1 100 29-128 86-205 (514)
198 PLN02571 triacylglycerol lipas 95.6 0.019 4.2E-07 49.9 4.7 33 83-115 212-246 (413)
199 PF11288 DUF3089: Protein of u 95.5 0.039 8.4E-07 43.4 5.7 70 47-116 37-116 (207)
200 PF00135 COesterase: Carboxyle 95.4 0.068 1.5E-06 49.0 8.1 100 30-130 126-245 (535)
201 COG1770 PtrB Protease II [Amin 95.4 1 2.2E-05 41.5 14.7 34 95-128 527-560 (682)
202 PLN02408 phospholipase A1 95.3 0.028 6.1E-07 48.2 4.8 32 84-115 187-220 (365)
203 PLN02934 triacylglycerol lipas 95.2 0.028 6.2E-07 49.9 4.5 32 83-114 309-340 (515)
204 KOG1202 Animal-type fatty acid 95.1 0.086 1.9E-06 51.4 7.6 94 28-130 2122-2219(2376)
205 COG2830 Uncharacterized protei 95.1 0.95 2.1E-05 33.8 11.2 79 31-132 13-92 (214)
206 PLN03016 sinapoylglucose-malat 95.0 0.14 3E-06 45.6 8.3 59 236-295 347-431 (433)
207 COG4947 Uncharacterized protei 94.9 0.07 1.5E-06 40.1 5.2 110 18-128 14-134 (227)
208 PF01083 Cutinase: Cutinase; 94.9 0.058 1.3E-06 41.8 5.0 47 83-129 69-121 (179)
209 COG1073 Hydrolases of the alph 94.8 0.087 1.9E-06 43.9 6.4 64 232-295 227-297 (299)
210 PLN02324 triacylglycerol lipas 94.8 0.049 1.1E-06 47.4 4.7 32 84-115 202-235 (415)
211 PF07082 DUF1350: Protein of u 94.7 0.21 4.5E-06 40.3 7.6 76 43-127 34-122 (250)
212 PF05277 DUF726: Protein of un 94.6 0.057 1.2E-06 46.1 4.6 37 93-129 218-259 (345)
213 PLN02310 triacylglycerol lipas 94.6 0.056 1.2E-06 47.0 4.6 20 96-115 210-229 (405)
214 PLN02213 sinapoylglucose-malat 94.4 0.17 3.7E-06 43.2 7.1 59 236-295 233-317 (319)
215 PF04083 Abhydro_lipase: Parti 94.3 0.051 1.1E-06 33.9 2.8 34 12-45 16-59 (63)
216 PLN02802 triacylglycerol lipas 94.2 0.072 1.6E-06 47.4 4.6 32 84-115 317-350 (509)
217 PLN02753 triacylglycerol lipas 93.9 0.089 1.9E-06 47.0 4.6 20 95-114 312-331 (531)
218 PLN03037 lipase class 3 family 93.7 0.1 2.2E-06 46.7 4.5 19 96-114 319-337 (525)
219 COG1505 Serine proteases of th 93.6 0.77 1.7E-05 41.8 9.7 113 14-127 400-532 (648)
220 PLN02719 triacylglycerol lipas 93.6 0.11 2.4E-06 46.3 4.5 19 96-114 299-317 (518)
221 PLN02209 serine carboxypeptida 93.5 0.28 6.1E-06 43.7 7.0 117 12-128 42-210 (437)
222 PLN02847 triacylglycerol lipas 93.5 0.096 2.1E-06 47.5 4.0 21 95-115 251-271 (633)
223 PLN02761 lipase class 3 family 93.4 0.13 2.8E-06 46.0 4.6 19 96-114 295-313 (527)
224 PLN03016 sinapoylglucose-malat 93.4 0.35 7.6E-06 43.0 7.4 117 12-128 40-208 (433)
225 COG3946 VirJ Type IV secretory 93.3 0.28 6.1E-06 42.3 6.3 73 32-109 263-340 (456)
226 COG2939 Carboxypeptidase C (ca 93.3 0.4 8.7E-06 42.6 7.4 100 29-128 101-234 (498)
227 PLN02213 sinapoylglucose-malat 91.6 0.54 1.2E-05 40.1 6.2 72 57-128 3-94 (319)
228 KOG1282 Serine carboxypeptidas 91.6 0.6 1.3E-05 41.6 6.4 60 236-295 363-448 (454)
229 KOG4569 Predicted lipase [Lipi 91.5 0.29 6.3E-06 42.1 4.4 34 81-114 157-190 (336)
230 KOG2237 Predicted serine prote 91.4 0.19 4E-06 45.9 3.2 32 95-126 549-580 (712)
231 KOG2029 Uncharacterized conser 90.6 0.45 9.7E-06 43.1 4.7 32 83-114 511-545 (697)
232 KOG1282 Serine carboxypeptidas 89.8 2.6 5.6E-05 37.7 8.8 117 12-129 47-212 (454)
233 PF08237 PE-PPE: PE-PPE domain 87.9 1.9 4.1E-05 34.7 6.2 33 83-115 34-68 (225)
234 COG4287 PqaA PhoPQ-activated p 87.8 5.9 0.00013 34.1 9.0 66 233-301 326-393 (507)
235 KOG1516 Carboxylesterase and r 87.1 2.2 4.8E-05 39.4 7.1 44 86-129 184-231 (545)
236 TIGR03712 acc_sec_asp2 accesso 85.9 3.2 6.9E-05 37.1 6.8 104 12-116 269-378 (511)
237 PF05576 Peptidase_S37: PS-10 84.3 2.1 4.5E-05 37.4 4.9 98 29-127 63-166 (448)
238 COG4553 DepA Poly-beta-hydroxy 84.2 24 0.00051 29.6 14.4 98 31-129 105-208 (415)
239 PF09949 DUF2183: Uncharacteri 81.8 14 0.00031 25.4 8.3 81 45-125 13-97 (100)
240 COG5153 CVT17 Putative lipase 79.3 2.4 5.2E-05 35.0 3.3 23 94-116 275-297 (425)
241 KOG4540 Putative lipase essent 79.3 2.4 5.2E-05 35.0 3.3 23 94-116 275-297 (425)
242 PF07519 Tannase: Tannase and 78.1 18 0.00039 32.9 8.9 81 48-129 52-149 (474)
243 cd07225 Pat_PNPLA6_PNPLA7 Pata 77.4 4 8.7E-05 34.6 4.4 33 84-116 32-64 (306)
244 COG1752 RssA Predicted esteras 77.3 3.6 7.8E-05 34.9 4.1 34 84-117 28-61 (306)
245 PRK10279 hypothetical protein; 76.4 3.9 8.5E-05 34.5 4.0 35 84-118 22-56 (300)
246 cd07198 Patatin Patatin-like p 74.8 6.1 0.00013 30.2 4.4 33 84-116 15-47 (172)
247 cd07227 Pat_Fungal_NTE1 Fungal 74.3 5.5 0.00012 33.1 4.3 33 84-116 27-59 (269)
248 PRK12467 peptide synthase; Pro 74.1 12 0.00027 43.4 8.2 96 30-127 3693-3792(3956)
249 cd07207 Pat_ExoU_VipD_like Exo 73.7 6 0.00013 30.8 4.3 33 84-116 16-48 (194)
250 COG2939 Carboxypeptidase C (ca 73.5 4.3 9.3E-05 36.4 3.6 28 267-294 463-490 (498)
251 KOG2385 Uncharacterized conser 73.3 9.1 0.0002 34.5 5.5 39 92-130 444-487 (633)
252 KOG2521 Uncharacterized conser 73.1 62 0.0013 28.1 12.2 62 236-297 225-292 (350)
253 cd07210 Pat_hypo_W_succinogene 71.9 7.4 0.00016 31.2 4.5 33 84-116 17-49 (221)
254 smart00827 PKS_AT Acyl transfe 70.9 5.6 0.00012 33.4 3.8 29 86-114 73-101 (298)
255 PF00698 Acyl_transf_1: Acyl t 70.7 3.1 6.7E-05 35.5 2.1 29 85-113 74-102 (318)
256 TIGR03131 malonate_mdcH malona 69.1 6.6 0.00014 33.0 3.8 29 86-114 67-95 (295)
257 cd07228 Pat_NTE_like_bacteria 66.3 9.9 0.00021 29.1 4.0 33 85-117 18-50 (175)
258 TIGR00128 fabD malonyl CoA-acy 66.0 7.8 0.00017 32.4 3.6 29 87-115 74-103 (290)
259 cd07209 Pat_hypo_Ecoli_Z1214_l 65.9 14 0.00031 29.4 4.9 34 84-117 15-48 (215)
260 KOG1252 Cystathionine beta-syn 63.6 30 0.00064 29.6 6.4 123 5-127 180-336 (362)
261 PF06277 EutA: Ethanolamine ut 62.8 1.2E+02 0.0026 27.5 10.9 116 9-129 314-443 (473)
262 PRK11613 folP dihydropteroate 62.5 44 0.00095 28.0 7.3 44 58-108 181-224 (282)
263 COG1576 Uncharacterized conser 62.1 16 0.00034 27.3 4.1 49 48-106 60-109 (155)
264 cd07230 Pat_TGL4-5_like Triacy 61.6 9 0.00019 34.1 3.3 38 84-121 90-127 (421)
265 cd07229 Pat_TGL3_like Triacylg 60.8 9.7 0.00021 33.4 3.3 40 85-124 101-140 (391)
266 cd07212 Pat_PNPLA9 Patatin-lik 60.1 20 0.00043 30.6 5.0 19 98-116 35-53 (312)
267 cd07205 Pat_PNPLA6_PNPLA7_NTE1 57.4 27 0.00059 26.6 5.0 33 84-116 17-49 (175)
268 cd07231 Pat_SDP1-like Sugar-De 56.7 7.7 0.00017 32.9 1.9 34 84-117 85-118 (323)
269 PF13709 DUF4159: Domain of un 56.4 48 0.0011 26.3 6.3 57 236-292 53-109 (207)
270 cd01714 ETF_beta The electron 55.3 31 0.00066 27.3 5.0 63 56-126 78-145 (202)
271 TIGR02816 pfaB_fam PfaB family 54.8 16 0.00034 33.7 3.7 30 87-116 256-286 (538)
272 cd07232 Pat_PLPL Patain-like p 54.8 13 0.00029 32.9 3.1 40 84-123 84-123 (407)
273 COG0218 Predicted GTPase [Gene 54.1 25 0.00055 27.6 4.2 22 233-254 132-153 (200)
274 PF06309 Torsin: Torsin; Inte 53.5 10 0.00023 27.3 1.9 25 28-52 50-77 (127)
275 cd07208 Pat_hypo_Ecoli_yjju_li 53.1 32 0.0007 28.4 5.1 35 84-118 15-50 (266)
276 PF02590 SPOUT_MTase: Predicte 52.3 17 0.00037 27.4 3.0 49 48-105 60-109 (155)
277 cd07224 Pat_like Patatin-like 51.9 28 0.0006 28.2 4.4 34 84-117 16-51 (233)
278 COG3933 Transcriptional antite 51.7 74 0.0016 28.4 7.0 73 29-111 109-181 (470)
279 cd07204 Pat_PNPLA_like Patatin 48.4 33 0.00071 28.0 4.3 34 84-117 16-53 (243)
280 PRK00103 rRNA large subunit me 48.2 35 0.00075 25.8 4.1 48 49-105 61-109 (157)
281 COG3887 Predicted signaling pr 46.9 55 0.0012 30.4 5.7 34 94-128 337-376 (655)
282 COG4188 Predicted dienelactone 46.8 13 0.00029 32.1 1.8 55 230-284 245-303 (365)
283 TIGR02883 spore_cwlD N-acetylm 46.5 37 0.0008 26.4 4.2 14 57-71 1-14 (189)
284 cd07206 Pat_TGL3-4-5_SDP1 Tria 45.8 30 0.00064 29.2 3.7 34 85-118 87-120 (298)
285 PRK10319 N-acetylmuramoyl-l-al 44.6 45 0.00098 28.0 4.6 16 56-72 56-71 (287)
286 PF05576 Peptidase_S37: PS-10 44.2 31 0.00066 30.5 3.6 61 231-293 346-412 (448)
287 COG4819 EutA Ethanolamine util 43.4 2.2E+02 0.0047 24.6 9.5 114 9-127 317-440 (473)
288 cd07218 Pat_iPLA2 Calcium-inde 42.8 47 0.001 27.2 4.4 33 85-117 18-52 (245)
289 cd07221 Pat_PNPLA3 Patatin-lik 41.8 51 0.0011 27.1 4.5 21 97-117 34-54 (252)
290 cd07220 Pat_PNPLA2 Patatin-lik 40.3 51 0.0011 27.1 4.2 21 97-117 38-58 (249)
291 PF11713 Peptidase_C80: Peptid 38.9 20 0.00043 27.1 1.5 47 61-107 59-116 (157)
292 cd08769 DAP_dppA_2 Peptidase M 36.9 1.3E+02 0.0028 25.1 6.0 55 233-293 144-201 (270)
293 PF14253 AbiH: Bacteriophage a 36.7 18 0.00038 29.9 1.1 15 93-107 233-247 (270)
294 COG1448 TyrB Aspartate/tyrosin 36.6 2.2E+02 0.0048 25.0 7.5 85 30-128 172-263 (396)
295 cd07222 Pat_PNPLA4 Patatin-lik 36.4 56 0.0012 26.7 3.9 30 85-114 17-50 (246)
296 COG4850 Uncharacterized conser 35.4 72 0.0016 27.2 4.3 45 84-128 267-313 (373)
297 KOG2170 ATPase of the AAA+ sup 34.6 22 0.00048 30.0 1.3 18 28-45 107-125 (344)
298 cd01819 Patatin_and_cPLA2 Pata 33.9 1.1E+02 0.0023 22.9 4.9 29 85-113 16-46 (155)
299 PF06850 PHB_depo_C: PHB de-po 32.8 89 0.0019 24.6 4.2 62 233-294 130-201 (202)
300 cd07211 Pat_PNPLA8 Patatin-lik 32.0 60 0.0013 27.5 3.6 17 98-114 44-60 (308)
301 cd06143 PAN2_exo DEDDh 3'-5' e 31.8 52 0.0011 25.3 2.8 23 84-106 90-112 (174)
302 PF06289 FlbD: Flagellar prote 31.3 60 0.0013 20.0 2.5 36 260-295 23-58 (60)
303 COG0331 FabD (acyl-carrier-pro 30.8 68 0.0015 27.3 3.6 22 93-114 83-104 (310)
304 PF00326 Peptidase_S9: Prolyl 29.7 1.3E+02 0.0028 23.5 5.0 60 29-92 144-209 (213)
305 COG0860 AmiC N-acetylmuramoyl- 28.1 1.2E+02 0.0027 24.5 4.6 37 56-93 42-85 (231)
306 cd08770 DAP_dppA_3 Peptidase M 27.9 2E+02 0.0044 23.8 5.8 56 233-294 144-201 (263)
307 cd08663 DAP_dppA_1 Peptidase M 27.8 2.2E+02 0.0048 23.7 6.0 55 233-293 144-201 (266)
308 TIGR03607 patatin-related prot 27.3 79 0.0017 30.6 3.8 20 95-114 66-85 (739)
309 cd07217 Pat17_PNPLA8_PNPLA9_li 26.7 63 0.0014 28.0 2.8 18 98-115 44-61 (344)
310 PRK10431 N-acetylmuramoyl-l-al 26.5 85 0.0018 28.3 3.6 15 57-72 192-206 (445)
311 PF01734 Patatin: Patatin-like 26.3 85 0.0018 23.7 3.4 21 96-116 28-48 (204)
312 cd07213 Pat17_PNPLA8_PNPLA9_li 26.0 1.4E+02 0.0031 25.0 4.8 19 98-116 37-55 (288)
313 KOG4388 Hormone-sensitive lipa 25.5 1.1E+02 0.0024 28.6 4.1 21 94-114 468-488 (880)
314 TIGR00246 tRNA_RlmH_YbeA rRNA 25.4 1.2E+02 0.0025 22.8 3.7 48 48-105 59-106 (153)
315 PF07521 RMMBL: RNA-metabolisi 25.4 79 0.0017 17.7 2.2 33 55-100 6-38 (43)
316 cd00281 DAP_dppA Peptidase M55 24.6 2.8E+02 0.006 23.1 6.0 55 233-293 143-200 (265)
317 PF03575 Peptidase_S51: Peptid 23.6 62 0.0013 24.1 2.0 22 87-108 60-81 (154)
318 cd01715 ETF_alpha The electron 23.0 1.3E+02 0.0028 22.8 3.7 52 57-116 54-106 (168)
319 cd07199 Pat17_PNPLA8_PNPLA9_li 22.9 1.5E+02 0.0033 24.2 4.4 18 98-115 37-54 (258)
320 KOG1752 Glutaredoxin and relat 22.5 1.6E+02 0.0034 20.5 3.7 67 28-109 13-83 (104)
321 PF01520 Amidase_3: N-acetylmu 22.5 75 0.0016 24.1 2.3 12 59-71 1-12 (175)
322 PRK13753 dihydropteroate synth 22.5 1.5E+02 0.0032 24.9 4.1 47 58-110 169-217 (279)
323 PF10081 Abhydrolase_9: Alpha/ 22.3 1.7E+02 0.0036 24.6 4.3 48 83-130 94-147 (289)
324 COG0796 MurI Glutamate racemas 22.2 4.4E+02 0.0096 22.0 6.7 57 236-295 5-66 (269)
325 KOG1283 Serine carboxypeptidas 22.2 1.2E+02 0.0027 25.9 3.5 60 56-115 72-142 (414)
326 KOG2382 Predicted alpha/beta h 22.1 18 0.00039 30.7 -1.3 63 56-123 120-185 (315)
327 cd01985 ETF The electron trans 22.0 1.4E+02 0.003 22.9 3.8 51 57-115 62-113 (181)
328 PRK11071 esterase YqiA; Provis 21.9 3.8E+02 0.0082 20.7 6.4 53 238-296 3-59 (190)
329 PF05973 Gp49: Phage derived p 21.7 96 0.0021 20.6 2.5 23 17-40 51-73 (91)
330 PF00809 Pterin_bind: Pterin b 21.4 1.9E+02 0.0041 22.9 4.5 13 57-70 164-176 (210)
331 PF10605 3HBOH: 3HB-oligomer h 21.2 97 0.0021 29.0 3.0 33 98-130 288-321 (690)
332 PLN02752 [acyl-carrier protein 21.1 1E+02 0.0022 26.6 3.1 19 97-115 126-144 (343)
333 cd07219 Pat_PNPLA1 Patatin-lik 20.5 1.6E+02 0.0035 25.9 4.1 18 98-115 47-64 (382)
334 PF03490 Varsurf_PPLC: Variant 20.2 98 0.0021 18.1 1.8 26 76-101 6-31 (51)
No 1
>PLN02578 hydrolase
Probab=100.00 E-value=4.7e-45 Score=314.14 Aligned_cols=292 Identities=80% Similarity=1.375 Sum_probs=222.5
Q ss_pred CCCCCCCCCccEEEEcCeeEEEEecCCCCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhH
Q 021980 2 ERLPFKPEGYNFWTWRGHKIHYVVQGEGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVW 81 (304)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~y~~~g~g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 81 (304)
+++++++++.++++++|.+++|...|+|+||||+||++++...|+.+++.|+++|+|+++|+||||.|+.+...++...+
T Consensus 59 ~~~~~~~~~~~~~~~~~~~i~Y~~~g~g~~vvliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~ 138 (354)
T PLN02578 59 ERLPFKKEGYNFWTWRGHKIHYVVQGEGLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVW 138 (354)
T ss_pred ccccccCCCceEEEECCEEEEEEEcCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHH
Confidence 46788888889999999999999999999999999999999999999999999999999999999999987667888888
Q ss_pred HHHHHHHHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCch---hhhHHHHHHhhHHHHH
Q 021980 82 KDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQS---EESTLQKVFLKPLKEI 158 (304)
Q Consensus 82 ~~~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 158 (304)
++++.++++.+..++++++||||||++++.+|.++|++++++|++++.+.+.......... ........+..+....
T Consensus 139 a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (354)
T PLN02578 139 RDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEW 218 (354)
T ss_pred HHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHH
Confidence 9999999999999999999999999999999999999999999999876543222111000 1111222122222222
Q ss_pred HHHHHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCc
Q 021980 159 FQRIVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCP 238 (304)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 238 (304)
+.+....+..+..+.+..........+.+....++++.+.+.....++.....+++.+..++......+..+.++++++|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 298 (354)
T PLN02578 219 FQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCP 298 (354)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCC
Confidence 22222222233334444444434444555555666766665544455555555666554444333345566778999999
Q ss_pred eEEEecCCCCCCCcHHHHHHHHhCCCceEEEeCCCCCCCccChHHHHHHHHHHHh
Q 021980 239 LLLLWGDLDPWVGSAKATRIKEFYPNTTLVNFQAGHCPHDEVPELVNKALMDWLS 293 (304)
Q Consensus 239 ~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~ 293 (304)
+++|+|++|.+++.+.++.+.+.+|+++++++++||++++|+|+++++.|.+|++
T Consensus 299 vLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 299 LLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNLQAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred EEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCccccCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999988899999999999999999999985
No 2
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=3.1e-41 Score=284.25 Aligned_cols=274 Identities=35% Similarity=0.652 Sum_probs=186.6
Q ss_pred ccEEEEcCeeEEEEecC-CCCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcch-------hhhchhhHH
Q 021980 11 YNFWTWRGHKIHYVVQG-EGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAI-------IEYDAMVWK 82 (304)
Q Consensus 11 ~~~~~~~g~~~~y~~~g-~g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~ 82 (304)
.++++++|.+++|+..| ++++|||+||+++++..|+.+++.|+++++|+++|+||||.|+.+. ..++...++
T Consensus 10 ~~~~~~~~~~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a 89 (294)
T PLN02824 10 TRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWG 89 (294)
T ss_pred CceEEEcCeEEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHH
Confidence 57999999999999999 4899999999999999999999999999999999999999998642 247888899
Q ss_pred HHHHHHHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHH-HHHH
Q 021980 83 DQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKE-IFQR 161 (304)
Q Consensus 83 ~~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 161 (304)
+++.+++++++.++++|+||||||++|+.+|.++|++|+++|++++............ ....... .+...+.. ...+
T Consensus 90 ~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~ 167 (294)
T PLN02824 90 EQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPW-LGRPFIK-AFQNLLRETAVGK 167 (294)
T ss_pred HHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccch-hhhHHHH-HHHHHHhchhHHH
Confidence 9999999999999999999999999999999999999999999997542111110000 0000000 00000000 0000
Q ss_pred HHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEE
Q 021980 162 IVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLL 241 (304)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 241 (304)
.+..+ ...+......+...+.......+.....+............+.+.. .........+.++++++|||+
T Consensus 168 ---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~i~~P~lv 239 (294)
T PLN02824 168 ---AFFKS-VATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFI----SYSGGPLPEELLPAVKCPVLI 239 (294)
T ss_pred ---HHHHh-hcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHh----ccccccchHHHHhhcCCCeEE
Confidence 00000 0011111111111222222222323333222222221111211111 111111234567899999999
Q ss_pred EecCCCCCCCcHHHHHHHHhCCCceEEEe-CCCCCCCccChHHHHHHHHHHHhc
Q 021980 242 LWGDLDPWVGSAKATRIKEFYPNTTLVNF-QAGHCPHDEVPELVNKALMDWLST 294 (304)
Q Consensus 242 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~~ 294 (304)
|+|++|.+++.+.++.+.+.+++++++++ ++||+++.|+|++|++.|.+|+++
T Consensus 240 i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 240 AWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred EEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 99999999999999999999998999988 699999999999999999999975
No 3
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=6e-39 Score=276.54 Aligned_cols=279 Identities=39% Similarity=0.698 Sum_probs=183.5
Q ss_pred cEEEEcCe-eEEEEecCCC------CcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcch-hhhchhhHHH
Q 021980 12 NFWTWRGH-KIHYVVQGEG------SPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAI-IEYDAMVWKD 83 (304)
Q Consensus 12 ~~~~~~g~-~~~y~~~g~g------~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~ 83 (304)
+++.++|. +++|.+.|++ +||||+||++++...|+.+++.|+++|+|+++|+||||.|+.+. ..++...+++
T Consensus 64 ~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~ 143 (360)
T PLN02679 64 KKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTMETWAE 143 (360)
T ss_pred ceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCCCccccHHHHHH
Confidence 78899998 9999999976 89999999999999999999999999999999999999998653 3578888999
Q ss_pred HHHHHHHHhcCCCeEEEEechhHHHHHHHHh-cCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHH-
Q 021980 84 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAV-GLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQR- 161 (304)
Q Consensus 84 ~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~-~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 161 (304)
++.+++++++.++++|+||||||.+++.++. .+|++|+++|++++.+......... ........... .........
T Consensus 144 ~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~ 221 (360)
T PLN02679 144 LILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVD-DWRIKLLLPLL-WLIDFLLKQR 221 (360)
T ss_pred HHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccc-hHHHhhhcchH-HHHHHHhhch
Confidence 9999999999999999999999999999987 5799999999999764321111000 00000000000 000000000
Q ss_pred HHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEE
Q 021980 162 IVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLL 241 (304)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 241 (304)
......+........+...+...+.+.....+.+.+.+..+.........+... .......+..+.+++|++|||+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~i~~PtLi 297 (360)
T PLN02679 222 GIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSI----VTGPPGPNPIKLIPRISLPILV 297 (360)
T ss_pred hhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHH----HhcCCCCCHHHHhhhcCCCEEE
Confidence 000000000000111111222222232233333333332222222222222111 1111122344567889999999
Q ss_pred EecCCCCCCCcHH-----HHHHHHhCCCceEEEe-CCCCCCCccChHHHHHHHHHHHhccC
Q 021980 242 LWGDLDPWVGSAK-----ATRIKEFYPNTTLVNF-QAGHCPHDEVPELVNKALMDWLSTVK 296 (304)
Q Consensus 242 i~G~~D~~~~~~~-----~~~~~~~~~~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~~~~ 296 (304)
|+|++|.++|.+. .+.+.+.+|+++++++ ++||++++|+|++|++.|.+||++..
T Consensus 298 i~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 298 LWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred EEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 9999999998763 3456777899999988 69999999999999999999998653
No 4
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=5e-39 Score=268.33 Aligned_cols=261 Identities=20% Similarity=0.202 Sum_probs=178.5
Q ss_pred ccEEEEcCeeEEEEec--CCC-CcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHH
Q 021980 11 YNFWTWRGHKIHYVVQ--GEG-SPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVD 87 (304)
Q Consensus 11 ~~~~~~~g~~~~y~~~--g~g-~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~ 87 (304)
.++..++|.+++|... |++ +||||+||+++++..|+.+++.|+++|+|+++|+||||.|+.+...++...+++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~ 83 (276)
T TIGR02240 4 FRTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAAR 83 (276)
T ss_pred EEEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHH
Confidence 4678899999999774 334 7999999999999999999999999999999999999999866556778889999999
Q ss_pred HHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhh
Q 021980 88 FLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFL 167 (304)
Q Consensus 88 ~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (304)
+++.+++++++|+||||||++|+.+|.++|++|+++|++++......... ....... .... ....... .
T Consensus 84 ~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~-----~~~~~~~-~~~~-~~~~~~~---~- 152 (276)
T TIGR02240 84 MLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPG-----KPKVLMM-MASP-RRYIQPS---H- 152 (276)
T ss_pred HHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCC-----chhHHHH-hcCc-hhhhccc---c-
Confidence 99999999999999999999999999999999999999998653211000 0000000 0000 0000000 0
Q ss_pred hhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCC
Q 021980 168 FWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLD 247 (304)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 247 (304)
.. ..........+.............. ........+..... . ...+..+.+++|++|+|+|+|++|
T Consensus 153 ---~~--~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~----~~~~~~~~l~~i~~P~lii~G~~D 218 (276)
T TIGR02240 153 ---GI--HIAPDIYGGAFRRDPELAMAHASKV----RSGGKLGYYWQLFA-G----LGWTSIHWLHKIQQPTLVLAGDDD 218 (276)
T ss_pred ---cc--chhhhhccceeeccchhhhhhhhhc----ccCCCchHHHHHHH-H----cCCchhhHhhcCCCCEEEEEeCCC
Confidence 00 0000000000000000000000000 00000011111110 0 112233557899999999999999
Q ss_pred CCCCcHHHHHHHHhCCCceEEEeCCCCCCCccChHHHHHHHHHHHhccC
Q 021980 248 PWVGSAKATRIKEFYPNTTLVNFQAGHCPHDEVPELVNKALMDWLSTVK 296 (304)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~~ 296 (304)
++++++.++++.+.+|+++++++++||+++.|+|+++++.|.+|+.+..
T Consensus 219 ~~v~~~~~~~l~~~~~~~~~~~i~~gH~~~~e~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 219 PIIPLINMRLLAWRIPNAELHIIDDGHLFLITRAEAVAPIIMKFLAEER 267 (276)
T ss_pred CcCCHHHHHHHHHhCCCCEEEEEcCCCchhhccHHHHHHHHHHHHHHhh
Confidence 9999999999999999999998888999999999999999999997643
No 5
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.8e-38 Score=267.56 Aligned_cols=274 Identities=20% Similarity=0.301 Sum_probs=178.9
Q ss_pred ccEEEEcCeeEEEEecCCCCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHH
Q 021980 11 YNFWTWRGHKIHYVVQGEGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLK 90 (304)
Q Consensus 11 ~~~~~~~g~~~~y~~~g~g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~ 90 (304)
.++++++|.+++|...|+|+||||+||++++...|+.+++.|++.++||++|+||||.|+.+...++...+++++.++++
T Consensus 9 ~~~~~~~g~~i~y~~~G~g~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~ 88 (295)
T PRK03592 9 MRRVEVLGSRMAYIETGEGDPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFD 88 (295)
T ss_pred ceEEEECCEEEEEEEeCCCCEEEEECCCCCCHHHHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999999998999999999999999876656788889999999999
Q ss_pred HhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhh
Q 021980 91 EIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQ 170 (304)
Q Consensus 91 ~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
+++.++++|+||||||.+|+.+|.++|++|+++|++++...... ..............+... ..+.....
T Consensus 89 ~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~--~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 158 (295)
T PRK03592 89 ALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMT--WDDFPPAVRELFQALRSP--------GEGEEMVL 158 (295)
T ss_pred HhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcc--hhhcchhHHHHHHHHhCc--------cccccccc
Confidence 99999999999999999999999999999999999997322100 000000000000000000 00000000
Q ss_pred hcchhHHHHHhHhhhcCC--CCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhh-------ccccchhhhhccCCCceEE
Q 021980 171 AKQPARIVSVLKSVYINS--SNVDDYLVESITRPAADPNAAEVYYRLMTRFMLN-------QSKYTLDSVLSKLSCPLLL 241 (304)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~i~~P~li 241 (304)
.. .......+... ....+.....+......+................ ....+..+.++++++|||+
T Consensus 159 -~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 233 (295)
T PRK03592 159 -EE----NVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLL 233 (295)
T ss_pred -ch----hhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEE
Confidence 00 00000000000 0011110111111111111111100000000000 0001123456889999999
Q ss_pred EecCCCCCCCcHHH-HHHHHhCCCceEEEe-CCCCCCCccChHHHHHHHHHHHhccCCCC
Q 021980 242 LWGDLDPWVGSAKA-TRIKEFYPNTTLVNF-QAGHCPHDEVPELVNKALMDWLSTVKPQA 299 (304)
Q Consensus 242 i~G~~D~~~~~~~~-~~~~~~~~~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~~~~~~~ 299 (304)
|+|++|.++++... +.+.+.+++++++++ ++||+++.|+|+++++.|.+|++++..-+
T Consensus 234 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~~~ 293 (295)
T PRK03592 234 INAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRLAV 293 (295)
T ss_pred EeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcccc
Confidence 99999999955544 445567888999888 69999999999999999999998776544
No 6
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=8.6e-38 Score=264.17 Aligned_cols=269 Identities=23% Similarity=0.351 Sum_probs=180.2
Q ss_pred CCCCCCCCCCccEEEEcC-----eeEEEEecCC--CCcEEEEcccCCChhhHHhchHHHhc-cCcEEEecCCCCCCCCcc
Q 021980 1 MERLPFKPEGYNFWTWRG-----HKIHYVVQGE--GSPVVLIHGFGASAFHWRYNIPELAK-RYKVYAVDLLGFGWSEKA 72 (304)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g-----~~~~y~~~g~--g~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~ 72 (304)
++++|.+|...+|+.+++ .+++|...|+ +++|||+||+++++..|+.+++.|++ +|+|+++|+||||.|+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~ 90 (302)
T PRK00870 11 FENLPDYPFAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKP 90 (302)
T ss_pred ccCCcCCCCCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCC
Confidence 478899999999999999 8999999885 78999999999999999999999975 699999999999999764
Q ss_pred h--hhhchhhHHHHHHHHHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHH
Q 021980 73 I--IEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKV 150 (304)
Q Consensus 73 ~--~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~ 150 (304)
. ..++...+++++.+++++++.++++|+||||||++|+.+|..+|++|+++|++++......... ......+..+
T Consensus 91 ~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~ 167 (302)
T PRK00870 91 TRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPM---PDAFWAWRAF 167 (302)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccc---hHHHhhhhcc
Confidence 3 3467788999999999999999999999999999999999999999999999986422111000 0000000000
Q ss_pred HhhHHHHH-HHHHHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhh-------
Q 021980 151 FLKPLKEI-FQRIVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLN------- 222 (304)
Q Consensus 151 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 222 (304)
.. ..... ..... ..... ..........+....... ......+........
T Consensus 168 ~~-~~~~~~~~~~~------------------~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 225 (302)
T PRK00870 168 SQ-YSPVLPVGRLV------------------NGGTV--RDLSDAVRAAYDAPFPDE-SYKAGARAFPLLVPTSPDDPAV 225 (302)
T ss_pred cc-cCchhhHHHHh------------------hcccc--ccCCHHHHHHhhcccCCh-hhhcchhhhhhcCCCCCCCcch
Confidence 00 00000 00000 00000 000000000000000000 000000000000000
Q ss_pred ccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCCCce---EEEe-CCCCCCCccChHHHHHHHHHHHhcc
Q 021980 223 QSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTT---LVNF-QAGHCPHDEVPELVNKALMDWLSTV 295 (304)
Q Consensus 223 ~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~---~~~~-~~GH~~~~e~p~~~~~~i~~fl~~~ 295 (304)
.......+.++++++|+++|+|++|.+++... +.+.+.+|+++ +.++ ++||++++|+|++|++.|.+||+++
T Consensus 226 ~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 226 AANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred HHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 00001224467899999999999999999866 88999999876 6777 5899999999999999999999764
No 7
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=3.5e-36 Score=251.84 Aligned_cols=265 Identities=22% Similarity=0.341 Sum_probs=171.5
Q ss_pred CccEEEEcCeeEEEEecCCCCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcch-hhhchhhHHHHHHHH
Q 021980 10 GYNFWTWRGHKIHYVVQGEGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAI-IEYDAMVWKDQIVDF 88 (304)
Q Consensus 10 ~~~~~~~~g~~~~y~~~g~g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~ 88 (304)
..+|++++|.++||...|++++|||+||++.++..|+.+++.|.++|+|+++|+||||.|+.+. ..++...+++++.++
T Consensus 15 ~~~~~~~~~~~i~y~~~G~~~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 94 (286)
T PRK03204 15 ESRWFDSSRGRIHYIDEGTGPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEF 94 (286)
T ss_pred cceEEEcCCcEEEEEECCCCCEEEEECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHH
Confidence 3479999999999999999999999999999999999999999989999999999999998653 246777889999999
Q ss_pred HHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhh-HHHHHHHHHHhhhh
Q 021980 89 LKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLK-PLKEIFQRIVLGFL 167 (304)
Q Consensus 89 ~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 167 (304)
+++++.++++++||||||.+++.++..+|++|+++|++++.... .. ......+...... +.... . ....
T Consensus 95 ~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~---~-~~~~ 164 (286)
T PRK03204 95 VDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWP--AD----TLAMKAFSRVMSSPPVQYA---I-LRRN 164 (286)
T ss_pred HHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccC--CC----chhHHHHHHHhccccchhh---h-hhhh
Confidence 99999999999999999999999999999999999998764210 00 0000011110000 00000 0 0000
Q ss_pred hhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHh-hccccchhhhhcc--CCCceEEEec
Q 021980 168 FWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFML-NQSKYTLDSVLSK--LSCPLLLLWG 244 (304)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~--i~~P~lii~G 244 (304)
.. ....+.... ....++.....+......+............+.. ..........+.. +++||++|+|
T Consensus 165 ~~-------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G 235 (286)
T PRK03204 165 FF-------VERLIPAGT--EHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWG 235 (286)
T ss_pred HH-------HHHhccccc--cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEec
Confidence 00 000000000 0011111111111111111111111000000000 0000001111111 3899999999
Q ss_pred CCCCCCCcH-HHHHHHHhCCCceEEEe-CCCCCCCccChHHHHHHHHHHHh
Q 021980 245 DLDPWVGSA-KATRIKEFYPNTTLVNF-QAGHCPHDEVPELVNKALMDWLS 293 (304)
Q Consensus 245 ~~D~~~~~~-~~~~~~~~~~~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~ 293 (304)
++|.++++. .++.+.+.+|+++++++ ++||++++|+|+++++.|.+|+.
T Consensus 236 ~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 236 MKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred CCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 999988654 67889999999999999 69999999999999999999973
No 8
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=2.2e-36 Score=249.75 Aligned_cols=248 Identities=24% Similarity=0.367 Sum_probs=160.5
Q ss_pred eEEEEecCCCC-cEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeE
Q 021980 20 KIHYVVQGEGS-PVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAV 98 (304)
Q Consensus 20 ~~~y~~~g~g~-~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 98 (304)
+++|.+.|+|+ ||||+||+++++..|+.+++.|.++|+|+++|+||||.|+... .++...+++++ ..+..++++
T Consensus 3 ~~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~l----~~~~~~~~~ 77 (256)
T PRK10349 3 NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFG-ALSLADMAEAV----LQQAPDKAI 77 (256)
T ss_pred ccchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCCC-CCCHHHHHHHH----HhcCCCCeE
Confidence 47888899886 5999999999999999999999999999999999999997542 34544444443 345678999
Q ss_pred EEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHH
Q 021980 99 LVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIV 178 (304)
Q Consensus 99 lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (304)
|+||||||.+|+.+|.++|++|+++|++++.+......... ......... +...+...+......+
T Consensus 78 lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~------------ 143 (256)
T PRK10349 78 WLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWP-GIKPDVLAG-FQQQLSDDFQRTVERF------------ 143 (256)
T ss_pred EEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCC-cccHHHHHH-HHHHHHhchHHHHHHH------------
Confidence 99999999999999999999999999998754321110000 000001110 0000000000000000
Q ss_pred HHhHhhhcCCCCCChHH---HHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHH
Q 021980 179 SVLKSVYINSSNVDDYL---VESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKA 255 (304)
Q Consensus 179 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~ 255 (304)
+.............. ...... ..... ........ ... ...+..+.++++++|||+|+|++|.++|.+.+
T Consensus 144 --~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~-~~~---~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~ 215 (256)
T PRK10349 144 --LALQTMGTETARQDARALKKTVLA-LPMPE-VDVLNGGL-EIL---KTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVV 215 (256)
T ss_pred --HHHHHccCchHHHHHHHHHHHhhc-cCCCc-HHHHHHHH-HHH---HhCccHHHHhhcCCCeEEEecCCCccCCHHHH
Confidence 000000000000000 000000 00011 00100000 111 12345567889999999999999999999999
Q ss_pred HHHHHhCCCceEEEe-CCCCCCCccChHHHHHHHHHHHhc
Q 021980 256 TRIKEFYPNTTLVNF-QAGHCPHDEVPELVNKALMDWLST 294 (304)
Q Consensus 256 ~~~~~~~~~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~~ 294 (304)
+.+.+.+|+++++++ ++||++++|+|++|++.|.+|-.+
T Consensus 216 ~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 216 PMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred HHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 999999999999999 699999999999999999999654
No 9
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=4.3e-36 Score=251.54 Aligned_cols=264 Identities=22% Similarity=0.355 Sum_probs=168.7
Q ss_pred ccEEEEc-----CeeEEEEecCCCCcEEEEcccCCChhhHHh---chHHH-hccCcEEEecCCCCCCCCcchhh-hchhh
Q 021980 11 YNFWTWR-----GHKIHYVVQGEGSPVVLIHGFGASAFHWRY---NIPEL-AKRYKVYAVDLLGFGWSEKAIIE-YDAMV 80 (304)
Q Consensus 11 ~~~~~~~-----g~~~~y~~~g~g~~iv~lHG~~~~~~~~~~---~~~~l-~~~~~vi~~D~~G~G~S~~~~~~-~~~~~ 80 (304)
++|+.++ |.+++|...|++++|||+||++.+...|.. .+..+ +++|+|+++|+||||.|+..... .....
T Consensus 7 ~~~~~~~~~~~~~~~~~y~~~g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 86 (282)
T TIGR03343 7 SKFVKINEKGLSNFRIHYNEAGNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLV 86 (282)
T ss_pred ceEEEcccccccceeEEEEecCCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccch
Confidence 3566665 678999999999999999999988877754 33444 45699999999999999864221 12224
Q ss_pred HHHHHHHHHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHH
Q 021980 81 WKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQ 160 (304)
Q Consensus 81 ~~~~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (304)
+++++.++++.++.++++++||||||++++.+|.++|++++++|++++.... ...... .......... +...
T Consensus 87 ~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~-~~~~~~--~~~~~~~~~~-~~~~---- 158 (282)
T TIGR03343 87 NARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLG-PSLFAP--MPMEGIKLLF-KLYA---- 158 (282)
T ss_pred hHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCC-cccccc--CchHHHHHHH-HHhc----
Confidence 5788999999999999999999999999999999999999999999875321 100000 0000000000 0000
Q ss_pred HHHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhC-CCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCce
Q 021980 161 RIVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITR-PAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPL 239 (304)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 239 (304)
................+.............. ....+.....+..... ......++..+.+++|++|+
T Consensus 159 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~i~~Pv 226 (282)
T TIGR03343 159 ----------EPSYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQ--KAPLSTWDVTARLGEIKAKT 226 (282)
T ss_pred ----------CCCHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhcc--ccccccchHHHHHhhCCCCE
Confidence 0000000000000000111111111110000 0000100001100000 00011233455678999999
Q ss_pred EEEecCCCCCCCcHHHHHHHHhCCCceEEEe-CCCCCCCccChHHHHHHHHHHHhc
Q 021980 240 LLLWGDLDPWVGSAKATRIKEFYPNTTLVNF-QAGHCPHDEVPELVNKALMDWLST 294 (304)
Q Consensus 240 lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~~ 294 (304)
|+|+|++|.+++++.++.+++.+|+++++++ ++||+++.|+|++|++.|.+||++
T Consensus 227 lli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 227 LVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred EEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999 699999999999999999999963
No 10
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=2.8e-36 Score=243.54 Aligned_cols=274 Identities=28% Similarity=0.443 Sum_probs=178.3
Q ss_pred cEEEEcCeeEEEEecC--CCCcEEEEcccCCChhhHHhchHHHhcc-CcEEEecCCCCCCCCcch--hhhchhhHHHHHH
Q 021980 12 NFWTWRGHKIHYVVQG--EGSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAI--IEYDAMVWKDQIV 86 (304)
Q Consensus 12 ~~~~~~g~~~~y~~~g--~g~~iv~lHG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~l~ 86 (304)
.|++.+|.++||...| +||.|||+||++.++.+|+.+++.|+.. |+|+|+|+||+|.|+.+. ..|+....+.++.
T Consensus 25 k~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~ 104 (322)
T KOG4178|consen 25 KFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIV 104 (322)
T ss_pred eeEEEccEEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHH
Confidence 6999999999999988 5788999999999999999999999876 999999999999998763 5788899999999
Q ss_pred HHHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCC-----CchhhhHHHHHHhhH------H
Q 021980 87 DFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGS-----NQSEESTLQKVFLKP------L 155 (304)
Q Consensus 87 ~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~------~ 155 (304)
.+++.++.++++++||+||++||+.+|..+|++|+++|+++.+.. ++.... .....+...-.+.++ +
T Consensus 105 ~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~--~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~ 182 (322)
T KOG4178|consen 105 ALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP--NPKLKPLDSSKAIFGKSYYICLFQEPGKPETEL 182 (322)
T ss_pred HHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC--CcccchhhhhccccCccceeEeccccCcchhhh
Confidence 999999999999999999999999999999999999999987654 111000 000000000000000 0
Q ss_pred HHHHHHHHhhhhhhhhcchhHHHHHhHhhhcCCC--CCChHHHHhhhCCC--CCCchHHHHHHHHHHHHhhccccchhhh
Q 021980 156 KEIFQRIVLGFLFWQAKQPARIVSVLKSVYINSS--NVDDYLVESITRPA--ADPNAAEVYYRLMTRFMLNQSKYTLDSV 231 (304)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (304)
.....+....... ..+.+... .... ..+.. -..+.-.+.+.... ........+++.+... .. .....
T Consensus 183 s~~~~~~~~~~~~-~~~~~~~~--~~~~-~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~----w~-a~~~~ 253 (322)
T KOG4178|consen 183 SKDDTEMLVKTFR-TRKTPGPL--IVPK-QPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRN----WE-AAPWA 253 (322)
T ss_pred ccchhHHhHHhhh-ccccCCcc--ccCC-CCCCccchhhHHHHHHHHhccccccccccchhhHHHhhC----ch-hcccc
Confidence 0000000000000 00000000 0000 00000 00111111111100 0011122344433221 01 22345
Q ss_pred hccCCCceEEEecCCCCCCCcH-HHHHHHHhCCCc-eEEEe-CCCCCCCccChHHHHHHHHHHHhccC
Q 021980 232 LSKLSCPLLLLWGDLDPWVGSA-KATRIKEFYPNT-TLVNF-QAGHCPHDEVPELVNKALMDWLSTVK 296 (304)
Q Consensus 232 l~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~-~~~~~-~~GH~~~~e~p~~~~~~i~~fl~~~~ 296 (304)
+.++++|+++|+|+.|.+.+.. .++.+.+..|+. +.+++ ++||++++|+|+++++.|.+|+++.+
T Consensus 254 ~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 254 LAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSFS 321 (322)
T ss_pred ccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhhc
Confidence 6789999999999999998865 677788888987 44445 68999999999999999999998643
No 11
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=2.5e-35 Score=246.23 Aligned_cols=269 Identities=22% Similarity=0.266 Sum_probs=177.9
Q ss_pred CCCccEEEEcCeeEEEEecCC--CCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchh-hhchhhHHHH
Q 021980 8 PEGYNFWTWRGHKIHYVVQGE--GSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAII-EYDAMVWKDQ 84 (304)
Q Consensus 8 ~~~~~~~~~~g~~~~y~~~g~--g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~ 84 (304)
++++++++++|.+++|...|+ +++|||+||++++...|+.+++.|+++|+|+++|+||||.|+.+.. .++...++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 84 (278)
T TIGR03056 5 RDCSRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAED 84 (278)
T ss_pred CCccceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCccccCCCHHHHHHH
Confidence 456799999999999999885 7899999999999999999999999899999999999999986543 5778888999
Q ss_pred HHHHHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHH-hhHHHHHHHHHH
Q 021980 85 IVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVF-LKPLKEIFQRIV 163 (304)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 163 (304)
+.++++.+++++++|+||||||++++.+|.++|++++++|++++........... ... ...... ...... ..
T Consensus 85 l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~----~~ 157 (278)
T TIGR03056 85 LSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGT--LFP-YMARVLACNPFTP----PM 157 (278)
T ss_pred HHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCccccccccccc--ccc-hhhHhhhhcccch----HH
Confidence 9999999888999999999999999999999999999999998643211110000 000 000000 000000 00
Q ss_pred hhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEe
Q 021980 164 LGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLW 243 (304)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 243 (304)
.................. ...........+........ ....................++++++|+++|+
T Consensus 158 ---~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~ 227 (278)
T TIGR03056 158 ---MSRGAADQQRVERLIRDT---GSLLDKAGMTYYGRLIRSPA----HVDGALSMMAQWDLAPLNRDLPRITIPLHLIA 227 (278)
T ss_pred ---HHhhcccCcchhHHhhcc---ccccccchhhHHHHhhcCch----hhhHHHHHhhcccccchhhhcccCCCCEEEEE
Confidence 000000000000000000 00000000000000000000 00000001100011122345678999999999
Q ss_pred cCCCCCCCcHHHHHHHHhCCCceEEEe-CCCCCCCccChHHHHHHHHHHHh
Q 021980 244 GDLDPWVGSAKATRIKEFYPNTTLVNF-QAGHCPHDEVPELVNKALMDWLS 293 (304)
Q Consensus 244 G~~D~~~~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~ 293 (304)
|++|..++.+..+.+.+.+++++++++ ++||+++.|+|+++++.|.+|++
T Consensus 228 g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 228 GEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred eCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 999999999999999999999999888 57999999999999999999984
No 12
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-35 Score=255.81 Aligned_cols=262 Identities=19% Similarity=0.247 Sum_probs=165.1
Q ss_pred EEcCeeEEEEecCC---------CCcEEEEcccCCChhhHH--hchHHH--------hccCcEEEecCCCCCCCCcchh-
Q 021980 15 TWRGHKIHYVVQGE---------GSPVVLIHGFGASAFHWR--YNIPEL--------AKRYKVYAVDLLGFGWSEKAII- 74 (304)
Q Consensus 15 ~~~g~~~~y~~~g~---------g~~iv~lHG~~~~~~~~~--~~~~~l--------~~~~~vi~~D~~G~G~S~~~~~- 74 (304)
+.+|.+++|.+.|+ ++||||+||++++...|. .+.+.| +++|+||++|+||||.|+.+..
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 47899999999986 789999999999988875 344443 6779999999999999976432
Q ss_pred ------hhchhhHHHHHHHHH-HHhcCCCeE-EEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhH
Q 021980 75 ------EYDAMVWKDQIVDFL-KEIVKEPAV-LVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEEST 146 (304)
Q Consensus 75 ------~~~~~~~~~~l~~~~-~~~~~~~~~-lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 146 (304)
.++...+++++.+++ +++++++++ |+||||||++|+.+|.++|++|+++|++++.+..... ....
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~-------~~~~ 198 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSG-------RNWM 198 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccH-------HHHH
Confidence 367777888877754 778888985 8999999999999999999999999999875321100 0000
Q ss_pred HHHHHhhHHHHHHHHHHhhhhhhh-hcchhHHHHHhHh----------hhc--CC--CCCChHHHHhhhCCCCCCchHHH
Q 021980 147 LQKVFLKPLKEIFQRIVLGFLFWQ-AKQPARIVSVLKS----------VYI--NS--SNVDDYLVESITRPAADPNAAEV 211 (304)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~ 211 (304)
..... ........ ...... ...+......... .+. .. .....++....... ... ....
T Consensus 199 ~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~ 271 (360)
T PRK06489 199 WRRML----IESIRNDP-AWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAP-VTA-DAND 271 (360)
T ss_pred HHHHH----HHHHHhCC-CCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhh-hhc-CHHH
Confidence 00000 00000000 000000 0000000000000 000 00 00001111111100 000 1111
Q ss_pred HHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHH--HHHHHhCCCceEEEe-CC----CCCCCccChHHH
Q 021980 212 YYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKA--TRIKEFYPNTTLVNF-QA----GHCPHDEVPELV 284 (304)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~--~~~~~~~~~~~~~~~-~~----GH~~~~e~p~~~ 284 (304)
+..... .....+..+.+++|++|||+|+|++|.++|++.+ +.+++.+|+++++++ ++ ||+++ |+|++|
T Consensus 272 ~~~~~~----~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~ 346 (360)
T PRK06489 272 FLYQWD----SSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFW 346 (360)
T ss_pred HHHHHH----HhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHH
Confidence 111111 1112345677899999999999999999998865 789999999999999 44 99997 899999
Q ss_pred HHHHHHHHhcc
Q 021980 285 NKALMDWLSTV 295 (304)
Q Consensus 285 ~~~i~~fl~~~ 295 (304)
++.|.+||+++
T Consensus 347 ~~~i~~FL~~~ 357 (360)
T PRK06489 347 KAYLAEFLAQV 357 (360)
T ss_pred HHHHHHHHHhc
Confidence 99999999765
No 13
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=4.8e-34 Score=245.20 Aligned_cols=262 Identities=24% Similarity=0.352 Sum_probs=172.5
Q ss_pred EEEEcCeeEEEEecCC--CCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchh----hhchhhHHHHHH
Q 021980 13 FWTWRGHKIHYVVQGE--GSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAII----EYDAMVWKDQIV 86 (304)
Q Consensus 13 ~~~~~g~~~~y~~~g~--g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~----~~~~~~~~~~l~ 86 (304)
-.+.+|.+++|...|+ +++|||+||++.+...|+.+++.|+++|+|+++|+||||.|+.+.. .++...+++++.
T Consensus 109 ~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~ 188 (383)
T PLN03084 109 QASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLE 188 (383)
T ss_pred EEcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHH
Confidence 4578899999999984 6899999999999999999999999999999999999999987532 478888999999
Q ss_pred HHHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhh
Q 021980 87 DFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGF 166 (304)
Q Consensus 87 ~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (304)
++++++++++++|+||||||++++.+|.++|++|+++|++++..... ... .......+...+ ....+..
T Consensus 189 ~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~-~~~--~p~~l~~~~~~l---~~~~~~~----- 257 (383)
T PLN03084 189 SLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKE-HAK--LPSTLSEFSNFL---LGEIFSQ----- 257 (383)
T ss_pred HHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccc-ccc--chHHHHHHHHHH---hhhhhhc-----
Confidence 99999999999999999999999999999999999999999753211 000 000000010000 0000000
Q ss_pred hhhhhcchhHH-HHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccc---cchhhhh--ccCCCceE
Q 021980 167 LFWQAKQPARI-VSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSK---YTLDSVL--SKLSCPLL 240 (304)
Q Consensus 167 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l--~~i~~P~l 240 (304)
.+... ...+.. .......+.....+..+.................+..... ......+ .++++||+
T Consensus 258 ------~~~~~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvL 329 (383)
T PLN03084 258 ------DPLRASDKALTS--CGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPIT 329 (383)
T ss_pred ------chHHHHhhhhcc--cCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEE
Confidence 00000 000000 0000111111111111111111111111111111100000 0111111 46899999
Q ss_pred EEecCCCCCCCcHHHHHHHHhCCCceEEEe-CCCCCCCccChHHHHHHHHHHHhc
Q 021980 241 LLWGDLDPWVGSAKATRIKEFYPNTTLVNF-QAGHCPHDEVPELVNKALMDWLST 294 (304)
Q Consensus 241 ii~G~~D~~~~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~~ 294 (304)
+|+|++|.+++.+.++.+.+. +++++.++ ++||++++|+|+++++.|.+||++
T Consensus 330 iI~G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 330 VCWGLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred EEeeCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 999999999999988888887 58888888 689999999999999999999863
No 14
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=4.4e-34 Score=249.92 Aligned_cols=274 Identities=21% Similarity=0.282 Sum_probs=169.8
Q ss_pred cEEEEcCeeEEEEecCC-----CCcEEEEcccCCChhhHHh-chHHHh----ccCcEEEecCCCCCCCCcch-hhhchhh
Q 021980 12 NFWTWRGHKIHYVVQGE-----GSPVVLIHGFGASAFHWRY-NIPELA----KRYKVYAVDLLGFGWSEKAI-IEYDAMV 80 (304)
Q Consensus 12 ~~~~~~g~~~~y~~~g~-----g~~iv~lHG~~~~~~~~~~-~~~~l~----~~~~vi~~D~~G~G~S~~~~-~~~~~~~ 80 (304)
.|.+.+|.++||...|+ +++|||+||++++...|.. +++.|+ ++|+|+++|+||||.|+.+. ..++...
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~ 258 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLRE 258 (481)
T ss_pred eeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHH
Confidence 46678889999999884 3699999999999999985 456665 57999999999999998653 3467778
Q ss_pred HHHHHH-HHHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhh----H-
Q 021980 81 WKDQIV-DFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLK----P- 154 (304)
Q Consensus 81 ~~~~l~-~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~----~- 154 (304)
+++++. .+++.++.++++++||||||++++.+|.++|++|+++|++++........ . ............. .
T Consensus 259 ~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~ 335 (481)
T PLN03087 259 HLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKG--V-QATQYVMRKVAPRRVWPPI 335 (481)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccc--h-hHHHHHHHHhcccccCCcc
Confidence 888884 78888999999999999999999999999999999999998754321110 0 0000000000000 0
Q ss_pred ----H-HHHHHHHHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhcc---cc
Q 021980 155 ----L-KEIFQRIVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQS---KY 226 (304)
Q Consensus 155 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 226 (304)
. ...+............+.+ .....+..... ......++.+.+..... .. ....+........ ..
T Consensus 336 ~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~l~~-~~~~~~~l~~~~~~~~~-~~----~~~~l~~~i~~~~~~l~~ 408 (481)
T PLN03087 336 AFGASVACWYEHISRTICLVICKNH-RLWEFLTRLLT-RNRMRTFLIEGFFCHTH-NA----AWHTLHNIICGSGSKLDG 408 (481)
T ss_pred ccchhHHHHHHHHHhhhhcccccch-HHHHHHHHHhh-hhhhhHHHHHHHHhccc-hh----hHHHHHHHHhchhhhhhh
Confidence 0 0000000000000000000 00000000000 00111111111100000 00 0001101110000 01
Q ss_pred chhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCCCceEEEe-CCCCCCCc-cChHHHHHHHHHHHhcc
Q 021980 227 TLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLVNF-QAGHCPHD-EVPELVNKALMDWLSTV 295 (304)
Q Consensus 227 ~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~-~~GH~~~~-e~p~~~~~~i~~fl~~~ 295 (304)
.....+++|++|||+|+|++|.++|++.++.+++.+|+++++++ ++||++++ |+|++|++.|++|+...
T Consensus 409 ~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 409 YLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred HHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 12233457999999999999999999999999999999999999 69999985 99999999999999654
No 15
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=1e-34 Score=239.47 Aligned_cols=242 Identities=19% Similarity=0.242 Sum_probs=156.6
Q ss_pred cEEEEcccCCChhhHHhchHHH-hccCcEEEecCCCCCCCCcch-hhhchhhHHHHHHHHHHHhcC-CCeEEEEechhHH
Q 021980 31 PVVLIHGFGASAFHWRYNIPEL-AKRYKVYAVDLLGFGWSEKAI-IEYDAMVWKDQIVDFLKEIVK-EPAVLVGNSLGGF 107 (304)
Q Consensus 31 ~iv~lHG~~~~~~~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~~~~~~~-~~~~lvGhS~Gg~ 107 (304)
+|||+||++.+...|+.+++.| +.+|+|+++|+||||.|+.+. ..++...+++++.++++.++. ++++|+||||||+
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ 84 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGG 84 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchH
Confidence 5999999999999999999999 567999999999999997543 346778899999999999987 5999999999999
Q ss_pred HHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchh-H--HH-HHhHh
Q 021980 108 AALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPA-R--IV-SVLKS 183 (304)
Q Consensus 108 va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~-~~~~~ 183 (304)
+++.+|.++|++|+++|++++..... ... . . ..+... ... ...............+. . .. .....
T Consensus 85 ia~~~a~~~p~~v~~lvl~~~~~~~~-~~~-~-~---~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
T PLN02965 85 SVTEALCKFTDKISMAIYVAAAMVKP-GSI-I-S---PRLKNV----MEG-TEKIWDYTFGEGPDKPPTGIMMKPEFVRH 153 (255)
T ss_pred HHHHHHHhCchheeEEEEEccccCCC-CCC-c-c---HHHHhh----hhc-cccceeeeeccCCCCCcchhhcCHHHHHH
Confidence 99999999999999999998753211 000 0 0 000000 000 00000000000000000 0 00 00001
Q ss_pred hhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCC
Q 021980 184 VYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYP 263 (304)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~ 263 (304)
.+........+.... . ...... ...+ .. ..+....++.+++|+++|+|++|.++|++.++.+++.+|
T Consensus 154 ~~~~~~~~~~~~~~~-~-~~~~~~-~~~~-~~---------~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~ 220 (255)
T PLN02965 154 YYYNQSPLEDYTLSS-K-LLRPAP-VRAF-QD---------LDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWP 220 (255)
T ss_pred HHhcCCCHHHHHHHH-H-hcCCCC-Ccch-hh---------hhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCC
Confidence 111110000000000 0 000000 0000 00 001122456799999999999999999999999999999
Q ss_pred CceEEEe-CCCCCCCccChHHHHHHHHHHHhccC
Q 021980 264 NTTLVNF-QAGHCPHDEVPELVNKALMDWLSTVK 296 (304)
Q Consensus 264 ~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~~~~ 296 (304)
+++++++ ++||++++|+|++|++.|.+|+++..
T Consensus 221 ~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 221 PAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred cceEEEecCCCCchhhcCHHHHHHHHHHHHHHhc
Confidence 9999888 69999999999999999999998754
No 16
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=1.9e-34 Score=247.58 Aligned_cols=263 Identities=17% Similarity=0.230 Sum_probs=165.5
Q ss_pred cEEEEcCeeEEEEecCC-CCcEEEEcccCCChh------------hHHhchH---HH-hccCcEEEecCCCCCCCCcchh
Q 021980 12 NFWTWRGHKIHYVVQGE-GSPVVLIHGFGASAF------------HWRYNIP---EL-AKRYKVYAVDLLGFGWSEKAII 74 (304)
Q Consensus 12 ~~~~~~g~~~~y~~~g~-g~~iv~lHG~~~~~~------------~~~~~~~---~l-~~~~~vi~~D~~G~G~S~~~~~ 74 (304)
.+...+|.+++|+..|+ ++|+|||||+.+++. .|..+++ .| +++|+||++|+||||.|...
T Consensus 39 ~~~~~~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~-- 116 (343)
T PRK08775 39 RHAGLEDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV-- 116 (343)
T ss_pred cCCCCCCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC--
Confidence 45567899999999995 778999988776665 7888886 57 57899999999999988532
Q ss_pred hhchhhHHHHHHHHHHHhcCCCe-EEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhh
Q 021980 75 EYDAMVWKDQIVDFLKEIVKEPA-VLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLK 153 (304)
Q Consensus 75 ~~~~~~~~~~l~~~~~~~~~~~~-~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (304)
.++...+++++.+++++++++++ +|+||||||+||+.+|.++|++|+++|++++..... . ....+.... .
T Consensus 117 ~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~-------~-~~~~~~~~~-~ 187 (343)
T PRK08775 117 PIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAH-------P-YAAAWRALQ-R 187 (343)
T ss_pred CCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCC-------H-HHHHHHHHH-H
Confidence 45667789999999999999774 799999999999999999999999999998754211 0 000000000 0
Q ss_pred HHHHH--------HH-HHHhhhhhhhhcchhHHHHHhHhhhcCCCC---------CChHHHHhhhCCCCCCchHHHHHHH
Q 021980 154 PLKEI--------FQ-RIVLGFLFWQAKQPARIVSVLKSVYINSSN---------VDDYLVESITRPAADPNAAEVYYRL 215 (304)
Q Consensus 154 ~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (304)
..... .. .............+.... ..+..... ...++........... ....+...
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~ 262 (343)
T PRK08775 188 RAVALGQLQCAEKHGLALARQLAMLSYRTPEEFE----ERFDAPPEVINGRVRVAAEDYLDAAGAQYVART-PVNAYLRL 262 (343)
T ss_pred HHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHH----HHhCCCccccCCCccchHHHHHHHHHHHHHHhc-ChhHHHHH
Confidence 00000 00 000000000000000000 00100000 0000000000000000 00011111
Q ss_pred HHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhC-CCceEEEe-C-CCCCCCccChHHHHHHHHHHH
Q 021980 216 MTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFY-PNTTLVNF-Q-AGHCPHDEVPELVNKALMDWL 292 (304)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~-~-~GH~~~~e~p~~~~~~i~~fl 292 (304)
... . . .....+++|++|+|+|+|++|.++|.+..+.+.+.+ |+++++++ + +||++++|+|++|++.|.+||
T Consensus 263 ~~~-~-~----~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL 336 (343)
T PRK08775 263 SES-I-D----LHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTAL 336 (343)
T ss_pred HHH-H-h----hcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHH
Confidence 100 0 0 001236789999999999999999988888888877 79999998 4 899999999999999999999
Q ss_pred hccC
Q 021980 293 STVK 296 (304)
Q Consensus 293 ~~~~ 296 (304)
.++.
T Consensus 337 ~~~~ 340 (343)
T PRK08775 337 RSTG 340 (343)
T ss_pred Hhcc
Confidence 7654
No 17
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=2.9e-33 Score=231.00 Aligned_cols=239 Identities=20% Similarity=0.300 Sum_probs=159.4
Q ss_pred CCCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEechhHH
Q 021980 28 EGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGF 107 (304)
Q Consensus 28 ~g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~Gg~ 107 (304)
+++||||+||++++...|..++..|+++|+|+++|+||||.|+.. ..++...+++++.++++.++.++++|+||||||+
T Consensus 15 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~-~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~ 93 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRD-PVMNYPAMAQDLLDTLDALQIEKATFIGHSMGGK 93 (255)
T ss_pred CCCCEEEECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCC-CCCCHHHHHHHHHHHHHHcCCCceEEEEECHHHH
Confidence 468999999999999999999999999999999999999999864 3577888999999999999989999999999999
Q ss_pred HHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhHhhhcC
Q 021980 108 AALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLKSVYIN 187 (304)
Q Consensus 108 va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (304)
+|+.+|.++|++|+++|++++.+...... .....+.. ....... . ............... .
T Consensus 94 va~~~a~~~~~~v~~lvli~~~~~~~~~~-----~~~~~~~~-----~~~~~~~---~-----~~~~~~~~~~~~~~~-~ 154 (255)
T PRK10673 94 AVMALTALAPDRIDKLVAIDIAPVDYHVR-----RHDEIFAA-----INAVSEA---G-----ATTRQQAAAIMRQHL-N 154 (255)
T ss_pred HHHHHHHhCHhhcceEEEEecCCCCccch-----hhHHHHHH-----HHHhhhc---c-----cccHHHHHHHHHHhc-C
Confidence 99999999999999999998643211100 00000000 0000000 0 000000000000000 0
Q ss_pred CCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCCCceE
Q 021980 188 SSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTL 267 (304)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~ 267 (304)
......+....+....... ........... ....+.++.+++|+|+|+|++|..++.+..+.+.+.+|++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~ 226 (255)
T PRK10673 155 EEGVIQFLLKSFVDGEWRF-NVPVLWDQYPH-------IVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARA 226 (255)
T ss_pred CHHHHHHHHhcCCcceeEe-eHHHHHHhHHH-------HhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEE
Confidence 0000001111110000000 00000010100 011234567899999999999999999999999999999999
Q ss_pred EEe-CCCCCCCccChHHHHHHHHHHHhc
Q 021980 268 VNF-QAGHCPHDEVPELVNKALMDWLST 294 (304)
Q Consensus 268 ~~~-~~GH~~~~e~p~~~~~~i~~fl~~ 294 (304)
.++ ++||+++.|+|+++++.|.+||.+
T Consensus 227 ~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 227 HVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred EEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 888 699999999999999999999975
No 18
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=9.6e-34 Score=238.20 Aligned_cols=255 Identities=33% Similarity=0.525 Sum_probs=160.2
Q ss_pred CCCcEEEEcccCCChhhHHhchHHHhcc--CcEEEecCCCCC-CCCcch-hhhchhhHHHHHHHHHHHhcCCCeEEEEec
Q 021980 28 EGSPVVLIHGFGASAFHWRYNIPELAKR--YKVYAVDLLGFG-WSEKAI-IEYDAMVWKDQIVDFLKEIVKEPAVLVGNS 103 (304)
Q Consensus 28 ~g~~iv~lHG~~~~~~~~~~~~~~l~~~--~~vi~~D~~G~G-~S~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS 103 (304)
+++|||++|||+++...|+.+++.|.+. ++|+++|++||| .|..+. ..|+...+.+.+..+..+...++++|+|||
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS 136 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHS 136 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeC
Confidence 5789999999999999999999999887 999999999999 454432 348888888999999999999999999999
Q ss_pred hhHHHHHHHHhcCCcceeEEEEe---cCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhH-HH-
Q 021980 104 LGGFAALVAAVGLPDQVTGVALL---NSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPAR-IV- 178 (304)
Q Consensus 104 ~Gg~va~~~a~~~p~~v~~lvli---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~- 178 (304)
+||.+|+.+|+.+|+.|++++++ ++.....+... +.......+.... ....... ....+.. +.
T Consensus 137 ~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~p~----~~~~~~~~~~~ 204 (326)
T KOG1454|consen 137 LGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGI-------KGLRRLLDKFLSA-LELLIPL----SLTEPVRLVSE 204 (326)
T ss_pred cHHHHHHHHHHhCcccccceeeecccccccccCCcch-------hHHHHhhhhhccH-hhhcCcc----ccccchhheeH
Confidence 99999999999999999999944 44322111110 0000000000000 0000000 0000000 00
Q ss_pred HHhHhh---hcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCC-CceEEEecCCCCCCCcHH
Q 021980 179 SVLKSV---YINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLS-CPLLLLWGDLDPWVGSAK 254 (304)
Q Consensus 179 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~P~lii~G~~D~~~~~~~ 254 (304)
...... +.+.....+........+.........+.+....... ......+.++++. ||+|+|||++|+++|.+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~ 282 (326)
T KOG1454|consen 205 GLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLG--FDENLLSLIKKIWKCPVLIIWGDKDQIVPLEL 282 (326)
T ss_pred hhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccC--ccchHHHhhccccCCceEEEEcCcCCccCHHH
Confidence 000000 0010011111111111110000000000111000000 0122334556776 999999999999999999
Q ss_pred HHHHHHhCCCceEEEe-CCCCCCCccChHHHHHHHHHHHhccC
Q 021980 255 ATRIKEFYPNTTLVNF-QAGHCPHDEVPELVNKALMDWLSTVK 296 (304)
Q Consensus 255 ~~~~~~~~~~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~~~~ 296 (304)
+..+.+.+|+++++++ ++||.+|+|.|+++++.|..|+.+..
T Consensus 283 ~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 283 AEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred HHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 9999999999999999 59999999999999999999998653
No 19
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=1e-32 Score=223.39 Aligned_cols=262 Identities=23% Similarity=0.347 Sum_probs=165.4
Q ss_pred CCCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhh----chhhHHHHHHHHHHHhcCCCeEEEEec
Q 021980 28 EGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEY----DAMVWKDQIVDFLKEIVKEPAVLVGNS 103 (304)
Q Consensus 28 ~g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~lvGhS 103 (304)
++.|+||+||+|++...|-.-.+.|++.+.|+++|++|+|+|+++..+. ....+.+.+++...+.++.+.+|+|||
T Consensus 89 ~~~plVliHGyGAg~g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHS 168 (365)
T KOG4409|consen 89 NKTPLVLIHGYGAGLGLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHS 168 (365)
T ss_pred CCCcEEEEeccchhHHHHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeecc
Confidence 3579999999999999998889999999999999999999998875432 234577888889899999999999999
Q ss_pred hhHHHHHHHHhcCCcceeEEEEecCCCCCCCC-CCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhc-chhHHHHHh
Q 021980 104 LGGFAALVAAVGLPDQVTGVALLNSAGQFGDG-RKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAK-QPARIVSVL 181 (304)
Q Consensus 104 ~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 181 (304)
|||.++..||.+||++|++||+++|.+..... ...........+.+... .....++ ... .+.+... .+.-..+..
T Consensus 169 fGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~-~~~~~~n-Pl~-~LR~~Gp~Gp~Lv~~~~ 245 (365)
T KOG4409|consen 169 FGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALF-LVATNFN-PLA-LLRLMGPLGPKLVSRLR 245 (365)
T ss_pred chHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhh-hhhhcCC-HHH-HHHhccccchHHHhhhh
Confidence 99999999999999999999999998865433 21111111111111110 0000000 000 0111110 111111111
Q ss_pred Hh---hhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCC--CceEEEecCCCCCCCcHHHH
Q 021980 182 KS---VYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLS--CPLLLLWGDLDPWVGSAKAT 256 (304)
Q Consensus 182 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~P~lii~G~~D~~~~~~~~~ 256 (304)
.. .+.+. .-.+++.+++.......+..+..+..+..... -.+..+.+.+..++ ||+++|+|++| +++...+.
T Consensus 246 ~d~~~k~~~~-~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g-~Ar~Pm~~r~~~l~~~~pv~fiyG~~d-WmD~~~g~ 322 (365)
T KOG4409|consen 246 PDRFRKFPSL-IEEDFLHEYIYHCNAQNPSGETAFKNLFEPGG-WARRPMIQRLRELKKDVPVTFIYGDRD-WMDKNAGL 322 (365)
T ss_pred HHHHHhcccc-chhHHHHHHHHHhcCCCCcHHHHHHHHHhccc-hhhhhHHHHHHhhccCCCEEEEecCcc-cccchhHH
Confidence 11 11111 11223344443333333333333333221110 01223445555565 99999999988 56777777
Q ss_pred HHHHhC--CCceEEEe-CCCCCCCccChHHHHHHHHHHHhcc
Q 021980 257 RIKEFY--PNTTLVNF-QAGHCPHDEVPELVNKALMDWLSTV 295 (304)
Q Consensus 257 ~~~~~~--~~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~~~ 295 (304)
++.+.. ..++.+++ ++||.+..|+|+.||+.|..+++..
T Consensus 323 ~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 323 EVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred HHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 777643 34677777 6999999999999999999999753
No 20
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=9.6e-33 Score=227.64 Aligned_cols=250 Identities=23% Similarity=0.346 Sum_probs=164.4
Q ss_pred EEEEecCC----CCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcc-hhhhchhhHHHHHHHHHHHhcCC
Q 021980 21 IHYVVQGE----GSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKA-IIEYDAMVWKDQIVDFLKEIVKE 95 (304)
Q Consensus 21 ~~y~~~g~----g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~-~~~~~~~~~~~~l~~~~~~~~~~ 95 (304)
++|...|+ +++|||+||+++++..|..+++.|.++|+|+++|+||||.|+.+ ...++...+++++.++++.++.+
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~ 80 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIE 80 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCC
Confidence 46777663 57899999999999999999999998999999999999999754 34567888899999999999999
Q ss_pred CeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchh
Q 021980 96 PAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPA 175 (304)
Q Consensus 96 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (304)
+++++||||||++++.++..+|++++++|++++...... ........ . ............ .. ..+.
T Consensus 81 ~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~-------~~~~~~~~----~-~~~~~~~~~~~~-~~-~~~~ 146 (257)
T TIGR03611 81 RFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDP-------HTRRCFDV----R-IALLQHAGPEAY-VH-AQAL 146 (257)
T ss_pred cEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCCh-------hHHHHHHH----H-HHHHhccCcchh-hh-hhhh
Confidence 999999999999999999999999999999986432100 00000000 0 000000000000 00 0000
Q ss_pred HHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHH
Q 021980 176 RIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKA 255 (304)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~ 255 (304)
.. ....+... . .....+...................... ..++....+.++++|+++++|++|.+++++.+
T Consensus 147 ~~---~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~ 217 (257)
T TIGR03611 147 FL---YPADWISE-N-AARLAADEAHALAHFPGKANVLRRINAL----EAFDVSARLDRIQHPVLLIANRDDMLVPYTQS 217 (257)
T ss_pred hh---ccccHhhc-c-chhhhhhhhhcccccCccHHHHHHHHHH----HcCCcHHHhcccCccEEEEecCcCcccCHHHH
Confidence 00 00000000 0 0000000000000000111111111111 12334466788999999999999999999999
Q ss_pred HHHHHhCCCceEEEe-CCCCCCCccChHHHHHHHHHHHh
Q 021980 256 TRIKEFYPNTTLVNF-QAGHCPHDEVPELVNKALMDWLS 293 (304)
Q Consensus 256 ~~~~~~~~~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~ 293 (304)
+.+.+.+++++++.+ ++||++++|+|+++++.|.+||+
T Consensus 218 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 218 LRLAAALPNAQLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred HHHHHhcCCceEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 999999999999888 69999999999999999999995
No 21
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=2.1e-32 Score=234.92 Aligned_cols=268 Identities=16% Similarity=0.171 Sum_probs=160.3
Q ss_pred EEcCeeEEEEecCC----CCc-EEEEcccCCChhhHHhch---HHHh-ccCcEEEecCCCCCCCCcchh---hhchh---
Q 021980 15 TWRGHKIHYVVQGE----GSP-VVLIHGFGASAFHWRYNI---PELA-KRYKVYAVDLLGFGWSEKAII---EYDAM--- 79 (304)
Q Consensus 15 ~~~g~~~~y~~~g~----g~~-iv~lHG~~~~~~~~~~~~---~~l~-~~~~vi~~D~~G~G~S~~~~~---~~~~~--- 79 (304)
+++|.+++|.+.|+ +++ ||++||+++++..|..++ +.|. ++|+||++|+||||.|+.+.. .++..
T Consensus 22 ~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 101 (339)
T PRK07581 22 TLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFP 101 (339)
T ss_pred CcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Confidence 57889999999885 334 555666776777776543 4664 579999999999999975421 23332
Q ss_pred --hHHHHHHH----HHHHhcCCC-eEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHh
Q 021980 80 --VWKDQIVD----FLKEIVKEP-AVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFL 152 (304)
Q Consensus 80 --~~~~~l~~----~~~~~~~~~-~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (304)
.+++++.. +++++++++ ++||||||||++|+.+|.+||++|+++|++++...... ......+...
T Consensus 102 ~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~--------~~~~~~~~~~ 173 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTP--------HNFVFLEGLK 173 (339)
T ss_pred ceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCH--------HHHHHHHHHH
Confidence 24566655 567799999 58999999999999999999999999999987543110 0000000000
Q ss_pred hHHH---------------HHHHHHHhhhhhhhhcchhHHHHHhHhh-hcCC--CCCChHHHHhhhCC--CCCCchHHHH
Q 021980 153 KPLK---------------EIFQRIVLGFLFWQAKQPARIVSVLKSV-YINS--SNVDDYLVESITRP--AADPNAAEVY 212 (304)
Q Consensus 153 ~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~ 212 (304)
..+. ............+ ...+. .++.. +... ....+++....... ..++......
T Consensus 174 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (339)
T PRK07581 174 AALTADPAFNGGWYAEPPERGLRAHARVYAGW-GFSQA----FYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAM 248 (339)
T ss_pred HHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHH-HhHHH----HHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHH
Confidence 0000 0000000000000 00000 00000 0000 00001111111100 0111111111
Q ss_pred HHHHHHH-Hhhcc--ccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCCCceEEEe-C-CCCCCCccChHHHHHH
Q 021980 213 YRLMTRF-MLNQS--KYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLVNF-Q-AGHCPHDEVPELVNKA 287 (304)
Q Consensus 213 ~~~~~~~-~~~~~--~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~-~-~GH~~~~e~p~~~~~~ 287 (304)
.+..... ..... ..+..+.+++|++|||+|+|++|..++++.++.+++.+|+++++++ + +||++++|+|+.+++.
T Consensus 249 l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~ 328 (339)
T PRK07581 249 LWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAF 328 (339)
T ss_pred HHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHH
Confidence 1111110 00111 1245677889999999999999999999999999999999999988 4 7999999999999999
Q ss_pred HHHHHhcc
Q 021980 288 LMDWLSTV 295 (304)
Q Consensus 288 i~~fl~~~ 295 (304)
|.+||++.
T Consensus 329 ~~~~~~~~ 336 (339)
T PRK07581 329 IDAALKEL 336 (339)
T ss_pred HHHHHHHH
Confidence 99999874
No 22
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=100.00 E-value=2.7e-32 Score=223.00 Aligned_cols=240 Identities=25% Similarity=0.351 Sum_probs=152.0
Q ss_pred CCC-CcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEechh
Q 021980 27 GEG-SPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLG 105 (304)
Q Consensus 27 g~g-~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~G 105 (304)
|+| ++|||+||+++++..|+.+++.|.++|+|+++|+||||.|+... .++...+++++. ....++++++|||||
T Consensus 1 g~g~~~iv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~~----~~~~~~~~lvG~S~G 75 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGFG-PLSLADAAEAIA----AQAPDPAIWLGWSLG 75 (245)
T ss_pred CCCCceEEEEcCCCCchhhHHHHHHhhccCeEEEEecCCcCccCCCCC-CcCHHHHHHHHH----HhCCCCeEEEEEcHH
Confidence 456 78999999999999999999999989999999999999997542 344444444443 334478999999999
Q ss_pred HHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhHhhh
Q 021980 106 GFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLKSVY 185 (304)
Q Consensus 106 g~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (304)
|.+++.+|.++|++++++|++++.+................+..+. ..+........ ........
T Consensus 76 g~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------------~~~~~~~~ 140 (245)
T TIGR01738 76 GLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQ-QQLSDDYQRTI--------------ERFLALQT 140 (245)
T ss_pred HHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHH-HHhhhhHHHHH--------------HHHHHHHH
Confidence 9999999999999999999998765432211111000001111110 00000000000 00000000
Q ss_pred cCCCCCChH---HHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhC
Q 021980 186 INSSNVDDY---LVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFY 262 (304)
Q Consensus 186 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~ 262 (304)
......... +...+.. ..... .......... ....+....++++++|+++|+|++|.+++.+..+.+.+.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~----~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~ 214 (245)
T TIGR01738 141 LGTPTARQDARALKQTLLA-RPTPN-VQVLQAGLEI----LATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLA 214 (245)
T ss_pred hcCCccchHHHHHHHHhhc-cCCCC-HHHHHHHHHH----hhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhC
Confidence 000000000 0010000 01110 0111111111 1122345567899999999999999999999999999999
Q ss_pred CCceEEEe-CCCCCCCccChHHHHHHHHHHH
Q 021980 263 PNTTLVNF-QAGHCPHDEVPELVNKALMDWL 292 (304)
Q Consensus 263 ~~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl 292 (304)
|+++++++ ++||++++|+|++|++.|.+|+
T Consensus 215 ~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 215 PHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred CCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 99999999 5899999999999999999996
No 23
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=2.7e-32 Score=236.66 Aligned_cols=271 Identities=17% Similarity=0.208 Sum_probs=168.7
Q ss_pred EEEcCeeEEEEecCC-----CCcEEEEcccCCChhh-------------HHhch----HHHhccCcEEEecCCCC-CCCC
Q 021980 14 WTWRGHKIHYVVQGE-----GSPVVLIHGFGASAFH-------------WRYNI----PELAKRYKVYAVDLLGF-GWSE 70 (304)
Q Consensus 14 ~~~~g~~~~y~~~g~-----g~~iv~lHG~~~~~~~-------------~~~~~----~~l~~~~~vi~~D~~G~-G~S~ 70 (304)
.+++|.+++|...|+ +|+|||+||++++... |+.++ +.+.++|+||++|++|+ |.|.
T Consensus 28 ~~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~ 107 (379)
T PRK00175 28 AVLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGST 107 (379)
T ss_pred CCcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCC
Confidence 357788899999884 5789999999999874 77765 34477899999999993 5443
Q ss_pred cch--------------hhhchhhHHHHHHHHHHHhcCCC-eEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCC
Q 021980 71 KAI--------------IEYDAMVWKDQIVDFLKEIVKEP-AVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDG 135 (304)
Q Consensus 71 ~~~--------------~~~~~~~~~~~l~~~~~~~~~~~-~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~ 135 (304)
.+. ..++...+++++.++++++++++ ++|+||||||++++.+|.++|++|+++|++++.+.....
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 187 (379)
T PRK00175 108 GPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQ 187 (379)
T ss_pred CCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHH
Confidence 211 14678889999999999999999 499999999999999999999999999999875432110
Q ss_pred CCCCCchhhhHHH---HHHh---------------hHHHH-HHHHHHhhhhhhhhcchhHHHHHhHhhhcCCCC------
Q 021980 136 RKGSNQSEESTLQ---KVFL---------------KPLKE-IFQRIVLGFLFWQAKQPARIVSVLKSVYINSSN------ 190 (304)
Q Consensus 136 ~~~~~~~~~~~~~---~~~~---------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 190 (304)
...+.. ..+. .+... ...+.. ..........+...+...+.....
T Consensus 188 -------~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~---~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~ 257 (379)
T PRK00175 188 -------NIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMI---GHITYLSDDELDEKFGRELQSGELPFGFDV 257 (379)
T ss_pred -------HHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHH---HHHHhcCHHHHHhhcCccccccccccCCCc
Confidence 000000 0000 00000 000000 000000000000000000000000
Q ss_pred ---CChHHH---HhhhCCCCCCchHHHHHHHHHHHHhhc----cccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHH
Q 021980 191 ---VDDYLV---ESITRPAADPNAAEVYYRLMTRFMLNQ----SKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKE 260 (304)
Q Consensus 191 ---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~ 260 (304)
...++. ..... ..++ ..+........... ...++.+.+++|++|||+|+|++|.++|++.++.+++
T Consensus 258 ~~~~~~~l~~~~~~~~~-~~d~---~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~ 333 (379)
T PRK00175 258 EFQVESYLRYQGDKFVE-RFDA---NSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVD 333 (379)
T ss_pred cchHHHHHHHHHHHHhh-ccCc---hHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHH
Confidence 000000 00000 0111 11111111110000 0023567889999999999999999999999999999
Q ss_pred hCCCc----eEEEe--CCCCCCCccChHHHHHHHHHHHhccCCC
Q 021980 261 FYPNT----TLVNF--QAGHCPHDEVPELVNKALMDWLSTVKPQ 298 (304)
Q Consensus 261 ~~~~~----~~~~~--~~GH~~~~e~p~~~~~~i~~fl~~~~~~ 298 (304)
.++++ +++++ ++||++++|+|++|++.|.+||+++...
T Consensus 334 ~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~~~ 377 (379)
T PRK00175 334 ALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAARE 377 (379)
T ss_pred HHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhhhc
Confidence 99987 66655 5999999999999999999999887654
No 24
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=100.00 E-value=2.1e-32 Score=235.57 Aligned_cols=263 Identities=19% Similarity=0.226 Sum_probs=164.8
Q ss_pred EEEcCeeEEEEecCC-----CCcEEEEcccCCChh-----------hHHhch----HHHhccCcEEEecCCC--CCCCCc
Q 021980 14 WTWRGHKIHYVVQGE-----GSPVVLIHGFGASAF-----------HWRYNI----PELAKRYKVYAVDLLG--FGWSEK 71 (304)
Q Consensus 14 ~~~~g~~~~y~~~g~-----g~~iv~lHG~~~~~~-----------~~~~~~----~~l~~~~~vi~~D~~G--~G~S~~ 71 (304)
.+++|.+++|.+.|+ +++|||+||+++++. .|+.++ ..+.++|+||++|+|| ||.|..
T Consensus 11 ~~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~ 90 (351)
T TIGR01392 11 GVLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGP 90 (351)
T ss_pred CccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCC
Confidence 468899999999984 478999999999763 488876 3446789999999999 566542
Q ss_pred c------------hhhhchhhHHHHHHHHHHHhcCCC-eEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCC
Q 021980 72 A------------IIEYDAMVWKDQIVDFLKEIVKEP-AVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKG 138 (304)
Q Consensus 72 ~------------~~~~~~~~~~~~l~~~~~~~~~~~-~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~ 138 (304)
+ ...++..++++++.++++++++++ ++|+||||||++++.+|.++|++++++|++++.......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--- 167 (351)
T TIGR01392 91 SSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAW--- 167 (351)
T ss_pred CCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHH---
Confidence 1 113677889999999999999998 999999999999999999999999999999975432110
Q ss_pred CCchhhhHHHHHHhhHHHH----------------HHHHHHhhhhhhhhcchhHHHHHhHhhhcCCCC------------
Q 021980 139 SNQSEESTLQKVFLKPLKE----------------IFQRIVLGFLFWQAKQPARIVSVLKSVYINSSN------------ 190 (304)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 190 (304)
...+.. ........ ...................+. ..+.....
T Consensus 168 ----~~~~~~-~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~~f~~~~~~~~~~~~~~~~~ 238 (351)
T TIGR01392 168 ----CIAFNE-VQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMA----ERFGRAPQSGESPASGFDTR 238 (351)
T ss_pred ----HHHHHH-HHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHH----HHhCcCcccccccccccCcc
Confidence 000000 00000000 000000000000000000000 11110000
Q ss_pred --CChHHHH---hhhCCCCCCchHHHHHHHHHHHHhh-c---cccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHh
Q 021980 191 --VDDYLVE---SITRPAADPNAAEVYYRLMTRFMLN-Q---SKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEF 261 (304)
Q Consensus 191 --~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 261 (304)
...+... .+.. ..++. .+.... ..+.. + ...+..+.+++|++|+|+|+|++|.++|++.++.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~-~~d~~---~~~~~~-~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~ 313 (351)
T TIGR01392 239 FQVESYLRYQGDKFVD-RFDAN---SYLYLT-RALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKA 313 (351)
T ss_pred chHHHHHHHHHHHHHh-hcCcc---hHHHHH-HHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHH
Confidence 0000000 0000 00010 011111 11110 0 00234577899999999999999999999999999999
Q ss_pred CCCceEE-----Ee-CCCCCCCccChHHHHHHHHHHHh
Q 021980 262 YPNTTLV-----NF-QAGHCPHDEVPELVNKALMDWLS 293 (304)
Q Consensus 262 ~~~~~~~-----~~-~~GH~~~~e~p~~~~~~i~~fl~ 293 (304)
+|++++. ++ ++||++++|+|++|++.|.+||+
T Consensus 314 i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 314 LPAAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred HhhcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 9998765 44 58999999999999999999984
No 25
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=9.4e-32 Score=220.26 Aligned_cols=237 Identities=19% Similarity=0.187 Sum_probs=146.6
Q ss_pred CCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEechhHHH
Q 021980 29 GSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFA 108 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~Gg~v 108 (304)
+|+|||+||+++++..|+.+++.|+ +|+|+++|+||||.|+.+. ..+...+++++.+++++++.++++++||||||.+
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~v 79 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP-DYPRLYIDLPGHGGSAAIS-VDGFADVSRLLSQTLQSYNILPYWLVGYSLGGRI 79 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC-CCCEEEecCCCCCCCCCcc-ccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHHH
Confidence 5789999999999999999999985 7999999999999998654 3477788899999999999999999999999999
Q ss_pred HHHHHhcCCcc-eeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhHh-hhc
Q 021980 109 ALVAAVGLPDQ-VTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLKS-VYI 186 (304)
Q Consensus 109 a~~~a~~~p~~-v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 186 (304)
|+.+|.++|+. |++++++++.+.... ........... ..+...+. ...........+.. .+.
T Consensus 80 a~~~a~~~~~~~v~~lvl~~~~~~~~~--------~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 143 (242)
T PRK11126 80 AMYYACQGLAGGLCGLIVEGGNPGLQN--------AEERQARWQND---RQWAQRFR-----QEPLEQVLADWYQQPVFA 143 (242)
T ss_pred HHHHHHhCCcccccEEEEeCCCCCCCC--------HHHHHHHHhhh---HHHHHHhc-----cCcHHHHHHHHHhcchhh
Confidence 99999999765 999999876432111 00000000000 00000000 00000000000000 000
Q ss_pred CCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCCCce
Q 021980 187 NSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTT 266 (304)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~ 266 (304)
.. . ............. .. .......... .......+..+.+.++++|+++|+|++|..+. .+.+. ++++
T Consensus 144 ~~-~-~~~~~~~~~~~~~-~~-~~~~~~~~~~-~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-~~~~ 212 (242)
T PRK11126 144 SL-N-AEQRQQLVAKRSN-NN-GAAVAAMLEA-TSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-LALP 212 (242)
T ss_pred cc-C-ccHHHHHHHhccc-CC-HHHHHHHHHh-cCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-hcCe
Confidence 00 0 0000000000000 00 0011111111 00011233456778999999999999998542 22332 3788
Q ss_pred EEEe-CCCCCCCccChHHHHHHHHHHHhc
Q 021980 267 LVNF-QAGHCPHDEVPELVNKALMDWLST 294 (304)
Q Consensus 267 ~~~~-~~GH~~~~e~p~~~~~~i~~fl~~ 294 (304)
++++ ++||++++|+|+++++.|.+|+.+
T Consensus 213 ~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 213 LHVIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred EEEeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 8888 589999999999999999999965
No 26
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=9.5e-32 Score=220.46 Aligned_cols=246 Identities=24% Similarity=0.363 Sum_probs=165.0
Q ss_pred eEEEEecCC---CCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCC
Q 021980 20 KIHYVVQGE---GSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEP 96 (304)
Q Consensus 20 ~~~y~~~g~---g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~ 96 (304)
+++|...|+ .|+|||+||++.+...|+.+++.|.++|+|+++|+||||.|+.+...++...+++++.++++.++.++
T Consensus 1 ~~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (251)
T TIGR02427 1 RLHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIER 80 (251)
T ss_pred CceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCc
Confidence 367877774 35689999999999999999999998999999999999999766556778888999999999998899
Q ss_pred eEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhH
Q 021980 97 AVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPAR 176 (304)
Q Consensus 97 ~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (304)
++++||||||++++.+|.++|+++++++++++......... .....................
T Consensus 81 v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~------------- 142 (251)
T TIGR02427 81 AVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPES-----WNARIAAVRAEGLAALADAVL------------- 142 (251)
T ss_pred eEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhh-----HHHHHhhhhhccHHHHHHHHH-------------
Confidence 99999999999999999999999999999886532211000 000000000000000000000
Q ss_pred HHHHhHhhhcCCCC-CChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHH
Q 021980 177 IVSVLKSVYINSSN-VDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKA 255 (304)
Q Consensus 177 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~ 255 (304)
...+...+..... ....+.+..... . ...+.... ... ...+..+.++++++|+++|+|++|..++.+..
T Consensus 143 -~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~-~~~---~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~ 212 (251)
T TIGR02427 143 -ERWFTPGFREAHPARLDLYRNMLVRQ----P-PDGYAGCC-AAI---RDADFRDRLGAIAVPTLCIAGDQDGSTPPELV 212 (251)
T ss_pred -HHHcccccccCChHHHHHHHHHHHhc----C-HHHHHHHH-HHH---hcccHHHHhhhcCCCeEEEEeccCCcCChHHH
Confidence 0000000000000 000000000000 0 00111110 011 12234456788999999999999999999999
Q ss_pred HHHHHhCCCceEEEe-CCCCCCCccChHHHHHHHHHHHh
Q 021980 256 TRIKEFYPNTTLVNF-QAGHCPHDEVPELVNKALMDWLS 293 (304)
Q Consensus 256 ~~~~~~~~~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~ 293 (304)
+.+.+.+++.+++++ ++||++++|+|+++++.|.+|++
T Consensus 213 ~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 213 REIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred HHHHHhCCCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 999999999998888 59999999999999999999984
No 27
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=4.8e-32 Score=233.32 Aligned_cols=262 Identities=20% Similarity=0.258 Sum_probs=165.6
Q ss_pred cEEEEcCeeEEEEecCC-----CCcEEEEcccCCChh-hHHhchHHHhc-cCcEEEecCCCCCCCCcchh-hhchhhHHH
Q 021980 12 NFWTWRGHKIHYVVQGE-----GSPVVLIHGFGASAF-HWRYNIPELAK-RYKVYAVDLLGFGWSEKAII-EYDAMVWKD 83 (304)
Q Consensus 12 ~~~~~~g~~~~y~~~g~-----g~~iv~lHG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~ 83 (304)
.+.+.+|.+++|..+++ .++|||+||++++.. .|+.+++.|++ +|+|+++|+||||.|+.... ..+...+++
T Consensus 65 ~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~ 144 (349)
T PLN02385 65 YEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVD 144 (349)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHH
Confidence 35567899999988763 346999999988765 46888888875 79999999999999986422 236677888
Q ss_pred HHHHHHHHhcC------CCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHH
Q 021980 84 QIVDFLKEIVK------EPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKE 157 (304)
Q Consensus 84 ~l~~~~~~~~~------~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (304)
++.++++.+.. .+++|+||||||++|+.++.++|++++++|+++|.......... .......+ ..+
T Consensus 145 dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~-----~~~~~~~~-~~~-- 216 (349)
T PLN02385 145 DVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVP-----PPLVLQIL-ILL-- 216 (349)
T ss_pred HHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccC-----chHHHHHH-HHH--
Confidence 88888877653 27999999999999999999999999999999875432211100 00111100 000
Q ss_pred HHHHHHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCC
Q 021980 158 IFQRIVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSC 237 (304)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 237 (304)
...... +.. .+... .....+... .........................+.. ..+....+.++++
T Consensus 217 --~~~~p~---~~~-~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~l~~i~~ 280 (349)
T PLN02385 217 --ANLLPK---AKL-VPQKD--LAELAFRDL--KKRKMAEYNVIAYKDKPRLRTAVELLRT------TQEIEMQLEEVSL 280 (349)
T ss_pred --HHHCCC---cee-cCCCc--cccccccCH--HHHHHhhcCcceeCCCcchHHHHHHHHH------HHHHHHhcccCCC
Confidence 000000 000 00000 000000000 0000000000000000111111111111 1123455788999
Q ss_pred ceEEEecCCCCCCCcHHHHHHHHhC--CCceEEEe-CCCCCCCccChHH----HHHHHHHHHhccCC
Q 021980 238 PLLLLWGDLDPWVGSAKATRIKEFY--PNTTLVNF-QAGHCPHDEVPEL----VNKALMDWLSTVKP 297 (304)
Q Consensus 238 P~lii~G~~D~~~~~~~~~~~~~~~--~~~~~~~~-~~GH~~~~e~p~~----~~~~i~~fl~~~~~ 297 (304)
|+|+|+|++|.+++.+.++.+.+.+ ++++++++ ++||+++.|+|++ +++.|.+||++...
T Consensus 281 P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 281 PLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred CEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999998887 56888888 6899999999987 88889999987653
No 28
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.98 E-value=1.8e-31 Score=221.48 Aligned_cols=260 Identities=17% Similarity=0.262 Sum_probs=163.2
Q ss_pred EcCeeEEEEec-CCCCcEEEEcccCCChhhHHhchHHHhc-cCcEEEecCCCCCCCCcch-hhhchhhHHHHHHHHHHHh
Q 021980 16 WRGHKIHYVVQ-GEGSPVVLIHGFGASAFHWRYNIPELAK-RYKVYAVDLLGFGWSEKAI-IEYDAMVWKDQIVDFLKEI 92 (304)
Q Consensus 16 ~~g~~~~y~~~-g~g~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~~~~~ 92 (304)
-+|.+++|... +++|+|||+||++.+...|+.+++.|.+ +|+|+++|+||||.|.... ..++...+++++.++++.+
T Consensus 4 ~~~~~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l 83 (273)
T PLN02211 4 ENGEEVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSL 83 (273)
T ss_pred ccccccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhc
Confidence 47888999876 5678899999999999999999999964 7999999999999885432 2357777888999999887
Q ss_pred c-CCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhh
Q 021980 93 V-KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQA 171 (304)
Q Consensus 93 ~-~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
. .++++|+||||||++++.++..+|++|+++|++++.... .+.. .... +...+ ..+.. ..... .. .+..
T Consensus 84 ~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~-~g~~----~~~~-~~~~~-~~~~~-~~~~~-~~-~~~~ 153 (273)
T PLN02211 84 PENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLK-LGFQ----TDED-MKDGV-PDLSE-FGDVY-EL-GFGL 153 (273)
T ss_pred CCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCC-CCCC----HHHH-Hhccc-cchhh-hccce-ee-eecc
Confidence 5 579999999999999999999999999999999764220 0000 0000 00000 00000 00000 00 0000
Q ss_pred cchhHHHHHhHhhhcCCCCCChHHH-HhhhCCCCCCchHHHHHHHHHH-H-HhhccccchhhhhccC-CCceEEEecCCC
Q 021980 172 KQPARIVSVLKSVYINSSNVDDYLV-ESITRPAADPNAAEVYYRLMTR-F-MLNQSKYTLDSVLSKL-SCPLLLLWGDLD 247 (304)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~l~~i-~~P~lii~G~~D 247 (304)
.+... .........+. ..+.. ..+.....+...... . ..........+....+ ++|+++|+|++|
T Consensus 154 -~~~~~--------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D 222 (273)
T PLN02211 154 -GPDQP--------PTSAIIKKEFRRKILYQ--MSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHD 222 (273)
T ss_pred -CCCCC--------CceeeeCHHHHHHHHhc--CCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCC
Confidence 00000 00000000000 00000 001000000000000 0 0000001111223455 789999999999
Q ss_pred CCCCcHHHHHHHHhCCCceEEEeCCCCCCCccChHHHHHHHHHHHhccC
Q 021980 248 PWVGSAKATRIKEFYPNTTLVNFQAGHCPHDEVPELVNKALMDWLSTVK 296 (304)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~~ 296 (304)
..+|++..+.+.+.+++++++.+++||++++++|+++++.|.++....-
T Consensus 223 ~~ip~~~~~~m~~~~~~~~~~~l~~gH~p~ls~P~~~~~~i~~~a~~~~ 271 (273)
T PLN02211 223 HVVKPEQQEAMIKRWPPSQVYELESDHSPFFSTPFLLFGLLIKAAASVG 271 (273)
T ss_pred CCCCHHHHHHHHHhCCccEEEEECCCCCccccCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999988899999999999999999999876543
No 29
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.98 E-value=1.8e-30 Score=217.37 Aligned_cols=263 Identities=19% Similarity=0.268 Sum_probs=162.7
Q ss_pred cEEEEcCeeEEEEecC---CCCcEEEEcccCCChh-hHHhchHHHhc-cCcEEEecCCCCCCCCcchh---hhchhhHHH
Q 021980 12 NFWTWRGHKIHYVVQG---EGSPVVLIHGFGASAF-HWRYNIPELAK-RYKVYAVDLLGFGWSEKAII---EYDAMVWKD 83 (304)
Q Consensus 12 ~~~~~~g~~~~y~~~g---~g~~iv~lHG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~---~~~~~~~~~ 83 (304)
++++++|.++.|...+ .+++|||+||+++++. .|..+...+.+ +|+|+++|+||||.|+.+.. .++...+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~ 84 (288)
T TIGR01250 5 GIITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVD 84 (288)
T ss_pred ceecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHH
Confidence 4678889999998766 2578999999865554 55666666665 69999999999999975422 267788889
Q ss_pred HHHHHHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHH---HhhHHHHHHH
Q 021980 84 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKV---FLKPLKEIFQ 160 (304)
Q Consensus 84 ~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 160 (304)
++.+++++++.++++++||||||.+++.+|..+|+++++++++++...... ........ +.........
T Consensus 85 ~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 156 (288)
T TIGR01250 85 ELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPE--------YVKELNRLRKELPPEVRAAIK 156 (288)
T ss_pred HHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchH--------HHHHHHHHHhhcChhHHHHHH
Confidence 999999999989999999999999999999999999999999876431100 00000000 0000000000
Q ss_pred HHHhhhhhhhhcchhHHHHHhHhhh----cCCCCCChHHHHhhhCCCCCCchHHHHHHHHH---HH--Hhhccccchhhh
Q 021980 161 RIVLGFLFWQAKQPARIVSVLKSVY----INSSNVDDYLVESITRPAADPNAAEVYYRLMT---RF--MLNQSKYTLDSV 231 (304)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~ 231 (304)
..... ..+ ..+ .......... ................ . .. ..+..+. .+ ......++..+.
T Consensus 157 ~~~~~-~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (288)
T TIGR01250 157 RCEAS-GDY--DNP-EYQEAVEVFYHHLLCRTRKWPEALKHLKSG--M---NT-NVYNIMQGPNEFTITGNLKDWDITDK 226 (288)
T ss_pred HHHhc-cCc--chH-HHHHHHHHHHHHhhcccccchHHHHHHhhc--c---CH-HHHhcccCCccccccccccccCHHHH
Confidence 00000 000 000 0000000000 0000000000000000 0 00 0000000 00 000012234556
Q ss_pred hccCCCceEEEecCCCCCCCcHHHHHHHHhCCCceEEEe-CCCCCCCccChHHHHHHHHHHHh
Q 021980 232 LSKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLVNF-QAGHCPHDEVPELVNKALMDWLS 293 (304)
Q Consensus 232 l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~ 293 (304)
++++++|+++++|++|.+ +++..+.+.+.+++++++++ ++||+++.|+|+++++.|.+||+
T Consensus 227 l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 227 LSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred hhccCCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 788999999999999985 56788889999999999888 69999999999999999999984
No 30
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.98 E-value=6.2e-31 Score=212.25 Aligned_cols=225 Identities=27% Similarity=0.407 Sum_probs=151.0
Q ss_pred EEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcch--hhhchhhHHHHHHHHHHHhcCCCeEEEEechhHHHH
Q 021980 32 VVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAI--IEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAA 109 (304)
Q Consensus 32 iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~Gg~va 109 (304)
|||+||++++...|+.+++.|+++|+|+++|+||||.|+... ..++...+++++.++++++..++++|+|||+||.++
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a 80 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMIA 80 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccccccccccccccccc
Confidence 799999999999999999999889999999999999998754 356778889999999999999999999999999999
Q ss_pred HHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhHhhhcCCC
Q 021980 110 LVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLKSVYINSS 189 (304)
Q Consensus 110 ~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (304)
+.++.++|++|+++|++++....... .........+.+...... ...... . .......+ .
T Consensus 81 ~~~a~~~p~~v~~~vl~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~---~-------~~~~~~~~-~-- 140 (228)
T PF12697_consen 81 LRLAARYPDRVKGLVLLSPPPPLPDS------PSRSFGPSFIRRLLAWRS-RSLRRL---A-------SRFFYRWF-D-- 140 (228)
T ss_dssp HHHHHHSGGGEEEEEEESESSSHHHH------HCHHHHHHHHHHHHHHHH-HHHHHH---H-------HHHHHHHH-T--
T ss_pred cccccccccccccceeeccccccccc------ccccccchhhhhhhhccc-cccccc---c-------cccccccc-c--
Confidence 99999999999999999875421000 000000111111000000 000000 0 00000000 0
Q ss_pred CCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCCCceEEE
Q 021980 190 NVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLVN 269 (304)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~ 269 (304)
.....+.+.. ....+.+..... ....+..+.++.+++|+++|+|++|.+++.+..+.+.+..+++++++
T Consensus 141 --~~~~~~~~~~------~~~~~~~~~~~~---~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 209 (228)
T PF12697_consen 141 --GDEPEDLIRS------SRRALAEYLRSN---LWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVV 209 (228)
T ss_dssp --HHHHHHHHHH------HHHHHHHHHHHH---HHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEE
T ss_pred --cccccccccc------cccccccccccc---cccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEE
Confidence 0000000000 011111111110 01223446678899999999999999999999999999999999999
Q ss_pred e-CCCCCCCccChHHHHHH
Q 021980 270 F-QAGHCPHDEVPELVNKA 287 (304)
Q Consensus 270 ~-~~GH~~~~e~p~~~~~~ 287 (304)
+ ++||++++|+|++|++.
T Consensus 210 ~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 210 IPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp ETTSSSTHHHHSHHHHHHH
T ss_pred ECCCCCccHHHCHHHHhcC
Confidence 9 59999999999999874
No 31
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.98 E-value=3.5e-30 Score=224.10 Aligned_cols=255 Identities=27% Similarity=0.419 Sum_probs=168.3
Q ss_pred cEEEEcCeeEEEEecCC--CCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHH
Q 021980 12 NFWTWRGHKIHYVVQGE--GSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFL 89 (304)
Q Consensus 12 ~~~~~~g~~~~y~~~g~--g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~ 89 (304)
....+++.+++|...|+ +++|||+||++++...|..+.+.|.+.|+|+++|+||||.|+......+...+++++.+++
T Consensus 112 ~~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~ 191 (371)
T PRK14875 112 RKARIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFL 191 (371)
T ss_pred CcceEcCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 45678899999998874 6899999999999999999999998889999999999999965544567778889999999
Q ss_pred HHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhh
Q 021980 90 KEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFW 169 (304)
Q Consensus 90 ~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
+.++.++++|+||||||.+++.+|..+|+++.++|++++.+..... .......+........+.
T Consensus 192 ~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~--------- 255 (371)
T PRK14875 192 DALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEI-------NGDYIDGFVAAESRRELK--------- 255 (371)
T ss_pred HhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCccc-------chhHHHHhhcccchhHHH---------
Confidence 9998889999999999999999999999999999999875321100 000011000000000000
Q ss_pred hhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhh-ccccchhhhhccCCCceEEEecCCCC
Q 021980 170 QAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLN-QSKYTLDSVLSKLSCPLLLLWGDLDP 248 (304)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~P~lii~G~~D~ 248 (304)
..+...+.........+................+.......... ....+....+.+++||+++|+|++|.
T Consensus 256 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 326 (371)
T PRK14875 256 ---------PVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDR 326 (371)
T ss_pred ---------HHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCC
Confidence 00000011100111111111000000000011111111111110 11233445678899999999999999
Q ss_pred CCCcHHHHHHHHhCCCceEEEeC-CCCCCCccChHHHHHHHHHHHhc
Q 021980 249 WVGSAKATRIKEFYPNTTLVNFQ-AGHCPHDEVPELVNKALMDWLST 294 (304)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~-~GH~~~~e~p~~~~~~i~~fl~~ 294 (304)
+++.+.++.+ .++.++.+++ +||++++|+|+++++.|.+||++
T Consensus 327 ~vp~~~~~~l---~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 327 IIPAAHAQGL---PDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred ccCHHHHhhc---cCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 9987765543 3467888884 99999999999999999999975
No 32
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=5.1e-30 Score=223.37 Aligned_cols=270 Identities=19% Similarity=0.237 Sum_probs=156.0
Q ss_pred eEEEEec---CCCCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhc-----hhhHHHHHHHHHHH
Q 021980 20 KIHYVVQ---GEGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYD-----AMVWKDQIVDFLKE 91 (304)
Q Consensus 20 ~~~y~~~---g~g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~-----~~~~~~~l~~~~~~ 91 (304)
++.+... +++++|||+||++++...|...++.|+++|+|+++|+||||.|+.+...++ ...+++++.++++.
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~ 172 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKA 172 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhHHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHH
Confidence 4554432 346899999999999999988889998899999999999999976532211 11245677788888
Q ss_pred hcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhh------
Q 021980 92 IVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLG------ 165 (304)
Q Consensus 92 ~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 165 (304)
+++++++|+||||||.+|+.+|.++|++++++|++++.+........ ...+...........+......
T Consensus 173 l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 247 (402)
T PLN02894 173 KNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDK-----SEWLTKFRATWKGAVLNHLWESNFTPQK 247 (402)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchh-----HHHHhhcchhHHHHHHHHHhhcCCCHHH
Confidence 88899999999999999999999999999999999876543221110 0000000000000000000000
Q ss_pred hhhh-hhcchhHHHHHhHhhhcC---CCCC----ChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCC
Q 021980 166 FLFW-QAKQPARIVSVLKSVYIN---SSNV----DDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSC 237 (304)
Q Consensus 166 ~~~~-~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 237 (304)
.... ....+..........+.. .... .+.+.+.+..............+..... ......+....+.+|++
T Consensus 248 ~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~I~v 326 (402)
T PLN02894 248 IIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSF-GAFARKPLLESASEWKV 326 (402)
T ss_pred HHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccC-chhhcchHhhhcccCCC
Confidence 0000 000000000000000100 0000 0111111111111111111111111100 00112344566788999
Q ss_pred ceEEEecCCCCCCCcHHHHHHHHhC-CCceEEEe-CCCCCCCccChHHHHHHHHHHHhccC
Q 021980 238 PLLLLWGDLDPWVGSAKATRIKEFY-PNTTLVNF-QAGHCPHDEVPELVNKALMDWLSTVK 296 (304)
Q Consensus 238 P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~~~~ 296 (304)
|+++|+|++|.+.+ .....+.+.. +.++++++ ++||+++.|+|++|++.|.+|++...
T Consensus 327 P~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~ 386 (402)
T PLN02894 327 PTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYL 386 (402)
T ss_pred CEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhc
Confidence 99999999998765 5555555555 45788888 69999999999999999999986543
No 33
>PHA02857 monoglyceride lipase; Provisional
Probab=99.97 E-value=4.1e-30 Score=214.69 Aligned_cols=254 Identities=18% Similarity=0.222 Sum_probs=156.8
Q ss_pred cEEEEcCeeEEEEecCCC---Cc-EEEEcccCCChhhHHhchHHHhc-cCcEEEecCCCCCCCCcchhh-hchhhHHHHH
Q 021980 12 NFWTWRGHKIHYVVQGEG---SP-VVLIHGFGASAFHWRYNIPELAK-RYKVYAVDLLGFGWSEKAIIE-YDAMVWKDQI 85 (304)
Q Consensus 12 ~~~~~~g~~~~y~~~g~g---~~-iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~~l 85 (304)
.|+..||.+++|..+.++ ++ |+++||+++++..|+.+++.|.+ +|+|+++|+||||.|+..... .+...+.+++
T Consensus 4 ~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~ 83 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDV 83 (276)
T ss_pred eeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHH
Confidence 467789999999875432 34 55569999999999999999976 699999999999999754211 1223344555
Q ss_pred HHHHHHh----cCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHH
Q 021980 86 VDFLKEI----VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQR 161 (304)
Q Consensus 86 ~~~~~~~----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (304)
.+.+..+ ..++++|+||||||++|+.+|..+|++++++|++++.... .. ......+. ......+
T Consensus 84 ~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~---~~---~~~~~~~~----~~~~~~~-- 151 (276)
T PHA02857 84 VQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNA---EA---VPRLNLLA----AKLMGIF-- 151 (276)
T ss_pred HHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccc---cc---ccHHHHHH----HHHHHHh--
Confidence 5555433 2358999999999999999999999999999999874321 00 00000000 0000000
Q ss_pred HHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCC--chHHHHHHHHHHHHhhccccchhhhhccCCCce
Q 021980 162 IVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADP--NAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPL 239 (304)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 239 (304)
..........+... .. . ..........+.... .......... .. ..+..+.++++++||
T Consensus 152 --~~~~~~~~~~~~~~---------~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~l~~i~~Pv 212 (276)
T PHA02857 152 --YPNKIVGKLCPESV---------SR-D-MDEVYKYQYDPLVNHEKIKAGFASQVL-KA-----TNKVRKIIPKIKTPI 212 (276)
T ss_pred --CCCCccCCCCHhhc---------cC-C-HHHHHHHhcCCCccCCCccHHHHHHHH-HH-----HHHHHHhcccCCCCE
Confidence 00000000000000 00 0 000000000110000 0011111111 00 112345678899999
Q ss_pred EEEecCCCCCCCcHHHHHHHHhC-CCceEEEe-CCCCCCCccCh---HHHHHHHHHHHhccC
Q 021980 240 LLLWGDLDPWVGSAKATRIKEFY-PNTTLVNF-QAGHCPHDEVP---ELVNKALMDWLSTVK 296 (304)
Q Consensus 240 lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~-~~GH~~~~e~p---~~~~~~i~~fl~~~~ 296 (304)
|+|+|++|.++|++.++.+.+.+ ++.++.++ ++||+++.|++ +++.+.+.+||+..+
T Consensus 213 liv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 213 LILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNRV 274 (276)
T ss_pred EEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHhc
Confidence 99999999999999999998876 46788888 69999999977 478889999998753
No 34
>PRK10749 lysophospholipase L2; Provisional
Probab=99.97 E-value=6.9e-30 Score=218.06 Aligned_cols=266 Identities=16% Similarity=0.090 Sum_probs=162.8
Q ss_pred ccEEEEcCeeEEEEecCC---CCcEEEEcccCCChhhHHhchHHH-hccCcEEEecCCCCCCCCcchh------hhchhh
Q 021980 11 YNFWTWRGHKIHYVVQGE---GSPVVLIHGFGASAFHWRYNIPEL-AKRYKVYAVDLLGFGWSEKAII------EYDAMV 80 (304)
Q Consensus 11 ~~~~~~~g~~~~y~~~g~---g~~iv~lHG~~~~~~~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~------~~~~~~ 80 (304)
.++...+|.+++|..+++ +++||++||++++...|..++..+ ..+|+|+++|+||||.|+.... ..+...
T Consensus 33 ~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~ 112 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFND 112 (330)
T ss_pred eEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHH
Confidence 467788999999998763 467999999999988898888766 4679999999999999975321 135677
Q ss_pred HHHHHHHHHHHh----cCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHH
Q 021980 81 WKDQIVDFLKEI----VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLK 156 (304)
Q Consensus 81 ~~~~l~~~~~~~----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (304)
+++++.++++.+ ...+++++||||||++++.++.++|++++++|+++|......... . .... .+.....
T Consensus 113 ~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~---~---~~~~-~~~~~~~ 185 (330)
T PRK10749 113 YVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLP---S---WMAR-RILNWAE 185 (330)
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCC---c---HHHH-HHHHHHH
Confidence 888998888776 557899999999999999999999999999999987532211100 0 0000 0000000
Q ss_pred HHHHHHHhhhhhhhhcchhHHHHHhHhhhcCC-CCCCh----HHHHhhh-CCCCCCchHHHHHHHHHHHHhhccccchhh
Q 021980 157 EIFQRIVLGFLFWQAKQPARIVSVLKSVYINS-SNVDD----YLVESIT-RPAADPNAAEVYYRLMTRFMLNQSKYTLDS 230 (304)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (304)
. .......+... . ..+ ....+... -.... ...+.+. .+...... ..++........ ......
T Consensus 186 ~-~~~~~~~~~~~-~---~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~ 253 (330)
T PRK10749 186 G-HPRIRDGYAIG-T---GRW---RPLPFAINVLTHSRERYRRNLRFYADDPELRVGG--PTYHWVRESILA--GEQVLA 253 (330)
T ss_pred H-hcCCCCcCCCC-C---CCC---CCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCC--CcHHHHHHHHHH--HHHHHh
Confidence 0 00000000000 0 000 00000000 00000 0011111 11000000 001111110000 011234
Q ss_pred hhccCCCceEEEecCCCCCCCcHHHHHHHHhC-------CCceEEEe-CCCCCCCccCh---HHHHHHHHHHHhcc
Q 021980 231 VLSKLSCPLLLLWGDLDPWVGSAKATRIKEFY-------PNTTLVNF-QAGHCPHDEVP---ELVNKALMDWLSTV 295 (304)
Q Consensus 231 ~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-------~~~~~~~~-~~GH~~~~e~p---~~~~~~i~~fl~~~ 295 (304)
.++++++|+|+|+|++|.+++++.++.+.+.+ ++++++++ ++||.++.|.+ +.+.+.|.+||++.
T Consensus 254 ~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 254 GAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred hccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 56789999999999999999999888887765 34578888 69999999986 56778889999764
No 35
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.97 E-value=4.8e-29 Score=247.47 Aligned_cols=256 Identities=20% Similarity=0.273 Sum_probs=161.9
Q ss_pred EEEEecCC---CCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcch--------hhhchhhHHHHHHHHH
Q 021980 21 IHYVVQGE---GSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAI--------IEYDAMVWKDQIVDFL 89 (304)
Q Consensus 21 ~~y~~~g~---g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~--------~~~~~~~~~~~l~~~~ 89 (304)
++|...|+ +++|||+||++++...|+.+++.|.++|+|+++|+||||.|+... ..++.+.+++++.+++
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll 1439 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLI 1439 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHH
Confidence 44556664 579999999999999999999999989999999999999997532 2456777889999999
Q ss_pred HHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHH-HHhhhh-
Q 021980 90 KEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQR-IVLGFL- 167 (304)
Q Consensus 90 ~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~- 167 (304)
+.++.++++|+||||||++|+.++.++|++|+++|++++.+...... .................. ....+.
T Consensus 1440 ~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~-------~~~~~~~~~~~~~~~l~~~g~~~~~~ 1512 (1655)
T PLN02980 1440 EHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEV-------ARKIRSAKDDSRARMLIDHGLEIFLE 1512 (1655)
T ss_pred HHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchH-------HHHHHhhhhhHHHHHHHhhhHHHHHH
Confidence 99999999999999999999999999999999999998643221100 000000000000000000 000000
Q ss_pred hhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCC
Q 021980 168 FWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLD 247 (304)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 247 (304)
.|.. .. .+... .....+.......... .........+... ......+..+.++++++|+|+|+|++|
T Consensus 1513 ~~~~---~~-------~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~-~~~~~~dl~~~L~~I~~PtLlI~Ge~D 1579 (1655)
T PLN02980 1513 NWYS---GE-------LWKSL-RNHPHFNKIVASRLLH-KDVPSLAKLLSDL-SIGRQPSLWEDLKQCDTPLLLVVGEKD 1579 (1655)
T ss_pred Hhcc---HH-------Hhhhh-ccCHHHHHHHHHHHhc-CCHHHHHHHHHHh-hhcccchHHHHHhhCCCCEEEEEECCC
Confidence 0000 00 00000 0000011100000000 0011111111111 111123345678999999999999999
Q ss_pred CCCCcHHHHHHHHhCCC------------ceEEEe-CCCCCCCccChHHHHHHHHHHHhccCC
Q 021980 248 PWVGSAKATRIKEFYPN------------TTLVNF-QAGHCPHDEVPELVNKALMDWLSTVKP 297 (304)
Q Consensus 248 ~~~~~~~~~~~~~~~~~------------~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~~~~~ 297 (304)
..++ +.++++.+.+++ ++++++ ++||++++|+|++|++.|.+||++...
T Consensus 1580 ~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~ 1641 (1655)
T PLN02980 1580 VKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHN 1641 (1655)
T ss_pred CccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhccc
Confidence 8775 667778777765 377888 699999999999999999999987543
No 36
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.97 E-value=1.1e-28 Score=208.85 Aligned_cols=119 Identities=24% Similarity=0.248 Sum_probs=96.9
Q ss_pred ccEEE-EcCeeEEEEecCC--CCcEEEEcccCCChhhHHhchHHH-hccCcEEEecCCCCCCCCcch--hhhchhhHHHH
Q 021980 11 YNFWT-WRGHKIHYVVQGE--GSPVVLIHGFGASAFHWRYNIPEL-AKRYKVYAVDLLGFGWSEKAI--IEYDAMVWKDQ 84 (304)
Q Consensus 11 ~~~~~-~~g~~~~y~~~g~--g~~iv~lHG~~~~~~~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~ 84 (304)
.+++. .+|.+++|...|+ ++||||+||++++...+ .+...+ .++|+|+++|+||||.|+... ..++...++++
T Consensus 6 ~~~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 84 (306)
T TIGR01249 6 SGYLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVAD 84 (306)
T ss_pred CCeEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHH
Confidence 34555 4689999999885 78999999988776544 233444 357999999999999998543 23455677888
Q ss_pred HHHHHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCC
Q 021980 85 IVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 130 (304)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~ 130 (304)
+..+++.+++++++++||||||++++.++.++|++++++|++++..
T Consensus 85 l~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 85 IEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 8888999888999999999999999999999999999999998643
No 37
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=1.4e-28 Score=210.52 Aligned_cols=257 Identities=18% Similarity=0.270 Sum_probs=157.2
Q ss_pred ccEEEEcCeeEEEEecCC------CCcEEEEcccCCCh-hhHHhchHHHhc-cCcEEEecCCCCCCCCcchh-hhchhhH
Q 021980 11 YNFWTWRGHKIHYVVQGE------GSPVVLIHGFGASA-FHWRYNIPELAK-RYKVYAVDLLGFGWSEKAII-EYDAMVW 81 (304)
Q Consensus 11 ~~~~~~~g~~~~y~~~g~------g~~iv~lHG~~~~~-~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~ 81 (304)
..|.+.||.+++|+.+++ +++|||+||++.+. ..|......|.+ +|+|+++|+||||.|+.... ..+...+
T Consensus 35 ~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~ 114 (330)
T PLN02298 35 SFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLV 114 (330)
T ss_pred ceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHH
Confidence 356678999999987542 23499999998654 345666667765 69999999999999975321 2355667
Q ss_pred HHHHHHHHHHhcC------CCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHH
Q 021980 82 KDQIVDFLKEIVK------EPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPL 155 (304)
Q Consensus 82 ~~~l~~~~~~~~~------~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (304)
++++.++++.+.. .+++|+||||||++++.++.++|++|+++|++++.......... .. .....
T Consensus 115 ~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~---~~--~~~~~----- 184 (330)
T PLN02298 115 VEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRP---PW--PIPQI----- 184 (330)
T ss_pred HHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCC---ch--HHHHH-----
Confidence 8888888887643 37999999999999999999999999999999875432211100 00 00000
Q ss_pred HHHHHHHHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhh--hCCC---CCCchHHHHHHHHHHHHhhccccchhh
Q 021980 156 KEIFQRIVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESI--TRPA---ADPNAAEVYYRLMTRFMLNQSKYTLDS 230 (304)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (304)
.....+...... ... ....+ ........ ...+ ..+. ..+. ......... . .....+
T Consensus 185 ~~~~~~~~~~~~-~~~-~~~~~---------~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~-~-----~~~~~~ 245 (330)
T PLN02298 185 LTFVARFLPTLA-IVP-TADLL---------EKSVKVPA-KKIIAKRNPMRYNGKPR-LGTVVELLR-V-----TDYLGK 245 (330)
T ss_pred HHHHHHHCCCCc-ccc-CCCcc---------cccccCHH-HHHHHHhCccccCCCcc-HHHHHHHHH-H-----HHHHHH
Confidence 000000000000 000 00000 00000000 0000 0000 0000 001111110 0 011345
Q ss_pred hhccCCCceEEEecCCCCCCCcHHHHHHHHhCC--CceEEEe-CCCCCCCccChHH----HHHHHHHHHhccC
Q 021980 231 VLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYP--NTTLVNF-QAGHCPHDEVPEL----VNKALMDWLSTVK 296 (304)
Q Consensus 231 ~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~-~~GH~~~~e~p~~----~~~~i~~fl~~~~ 296 (304)
.+.++++|+|+|+|++|.++|++.++.+.+.++ +++++++ ++||+++.|+|+. +.+.|.+||.+..
T Consensus 246 ~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~ 318 (330)
T PLN02298 246 KLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERC 318 (330)
T ss_pred hhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 578899999999999999999999999887764 6788888 5899999999864 6677888987643
No 38
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.97 E-value=1.3e-28 Score=201.48 Aligned_cols=245 Identities=26% Similarity=0.360 Sum_probs=151.4
Q ss_pred CCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcch--hhhchhhHHHH-HHHHHHHhcCCCeEEEEechh
Q 021980 29 GSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAI--IEYDAMVWKDQ-IVDFLKEIVKEPAVLVGNSLG 105 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~-l~~~~~~~~~~~~~lvGhS~G 105 (304)
+++|||+||++++...|+.+++.|+++|+|+++|+||||.|+.+. ..++....+++ +..+++.++.++++++|||||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 80 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSMG 80 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEeccH
Confidence 478999999999999999999999988999999999999997642 23455666666 566667777889999999999
Q ss_pred HHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHH-HhH-h
Q 021980 106 GFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVS-VLK-S 183 (304)
Q Consensus 106 g~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~ 183 (304)
|.+|+.+|.++|+++++++++++.......... ...... .......+.+. ....+.. ... .
T Consensus 81 g~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~----------~~~~~~~~~~~~~ 143 (251)
T TIGR03695 81 GRIALYYALQYPERVQGLILESGSPGLATEEER-----AARRQN--DEQLAQRFEQE----------GLEAFLDDWYQQP 143 (251)
T ss_pred HHHHHHHHHhCchheeeeEEecCCCCcCchHhh-----hhhhhc--chhhhhHHHhc----------CccHHHHHHhcCc
Confidence 999999999999999999999875432111000 000000 00000000000 0000000 000 0
Q ss_pred hhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCC
Q 021980 184 VYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYP 263 (304)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~ 263 (304)
.+.............+........ ............. ....+....++++++|+++|+|++|..++ +..+.+.+..+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~ 220 (251)
T TIGR03695 144 LFASQKNLPPEQRQALRAKRLANN-PEGLAKMLRATGL-GKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLP 220 (251)
T ss_pred eeeecccCChHHhHHHHHhccccc-chHHHHHHHHhhh-hcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCC
Confidence 000000000000000000000000 0011111111100 01122345567899999999999998764 56778888899
Q ss_pred CceEEEe-CCCCCCCccChHHHHHHHHHHHh
Q 021980 264 NTTLVNF-QAGHCPHDEVPELVNKALMDWLS 293 (304)
Q Consensus 264 ~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~ 293 (304)
+++++++ ++||++++|+|+++++.|.+||+
T Consensus 221 ~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 221 NLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred CCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 9999989 47999999999999999999984
No 39
>PRK05855 short chain dehydrogenase; Validated
Probab=99.97 E-value=3.8e-29 Score=229.97 Aligned_cols=271 Identities=17% Similarity=0.276 Sum_probs=165.2
Q ss_pred cEEEEcCeeEEEEecCC--CCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcch--hhhchhhHHHHHHH
Q 021980 12 NFWTWRGHKIHYVVQGE--GSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAI--IEYDAMVWKDQIVD 87 (304)
Q Consensus 12 ~~~~~~g~~~~y~~~g~--g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~l~~ 87 (304)
.++..+|.+++|...|+ +++|||+||++++...|+.+++.|.++|+|+++|+||||.|+.+. ..++...+++++.+
T Consensus 6 ~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~ 85 (582)
T PRK05855 6 TVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAA 85 (582)
T ss_pred EEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHH
Confidence 56788999999999884 689999999999999999999999889999999999999997542 35678889999999
Q ss_pred HHHHhcCCC-eEEEEechhHHHHHHHHhc--CCcceeEEEEecCCCCCCCCC--CC-CCchhhhHHHHHHhhHHHHHHHH
Q 021980 88 FLKEIVKEP-AVLVGNSLGGFAALVAAVG--LPDQVTGVALLNSAGQFGDGR--KG-SNQSEESTLQKVFLKPLKEIFQR 161 (304)
Q Consensus 88 ~~~~~~~~~-~~lvGhS~Gg~va~~~a~~--~p~~v~~lvli~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~ 161 (304)
+++.++..+ ++|+||||||++++.++.. +|+++..++.+++........ .. ........+... .......
T Consensus 86 ~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 161 (582)
T PRK05855 86 VIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARA----LGQLLRS 161 (582)
T ss_pred HHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHH----HHHHhhh
Confidence 999988765 9999999999999988876 355565555544321100000 00 000000000000 0000000
Q ss_pred HHhhhh--------hhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhc
Q 021980 162 IVLGFL--------FWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLS 233 (304)
Q Consensus 162 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 233 (304)
...... .+.............. ........+...... .........+. .... .......+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~----~~~~---~~~~~~~~~ 230 (582)
T PRK05855 162 WYIYLFHLPVLPELLWRLGLGRAWPRLLRR--VEGTPVDPIPTQTTL--SDGAHGVKLYR----ANMI---RSLSRPRER 230 (582)
T ss_pred HHHHHHhCCCCcHHHhccchhhHHHHhhhh--ccCCCcchhhhhhhh--ccccchHHHHH----hhhh---hhhccCccC
Confidence 000000 0000000000000000 000000000000000 00000000000 0000 001112245
Q ss_pred cCCCceEEEecCCCCCCCcHHHHHHHHhCCCceEEEeCCCCCCCccChHHHHHHHHHHHhccCC
Q 021980 234 KLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLVNFQAGHCPHDEVPELVNKALMDWLSTVKP 297 (304)
Q Consensus 234 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~~~ 297 (304)
.+++|+++|+|++|.+++.+..+.+.+.+++.+++++++||+++.|+|+++++.|.+|+.+...
T Consensus 231 ~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 294 (582)
T PRK05855 231 YTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIKAGHWLPMSHPQVLAAAVAEFVDAVEG 294 (582)
T ss_pred CccCceEEEEeCCCcccCHHHhccccccCCcceEEEccCCCcchhhChhHHHHHHHHHHHhccC
Confidence 6899999999999999999999999998999888888999999999999999999999987543
No 40
>PLN02511 hydrolase
Probab=99.96 E-value=1.2e-28 Score=213.86 Aligned_cols=270 Identities=14% Similarity=0.174 Sum_probs=154.3
Q ss_pred EEEEcCeeEEEEec--------CCCCcEEEEcccCCChhh-H-HhchH-HHhccCcEEEecCCCCCCCCcchhhhchhhH
Q 021980 13 FWTWRGHKIHYVVQ--------GEGSPVVLIHGFGASAFH-W-RYNIP-ELAKRYKVYAVDLLGFGWSEKAIIEYDAMVW 81 (304)
Q Consensus 13 ~~~~~g~~~~y~~~--------g~g~~iv~lHG~~~~~~~-~-~~~~~-~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 81 (304)
..+.||..+.+... .++|+||++||+++++.. | +.++. .+.++|+|+++|+||||.|+.....+....+
T Consensus 76 l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~ 155 (388)
T PLN02511 76 LRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASF 155 (388)
T ss_pred EECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCc
Confidence 44567777775321 235679999999776543 4 44444 4567899999999999999754323333456
Q ss_pred HHHHHHHHHHhcC----CCeEEEEechhHHHHHHHHhcCCcc--eeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHH
Q 021980 82 KDQIVDFLKEIVK----EPAVLVGNSLGGFAALVAAVGLPDQ--VTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPL 155 (304)
Q Consensus 82 ~~~l~~~~~~~~~----~~~~lvGhS~Gg~va~~~a~~~p~~--v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (304)
++|+.++++.+.. .+++++||||||++++.|+.++|++ |.++++++++....... ......+...+...+
T Consensus 156 ~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~----~~~~~~~~~~y~~~~ 231 (388)
T PLN02511 156 TGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIAD----EDFHKGFNNVYDKAL 231 (388)
T ss_pred hHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHH----HHHhccHHHHHHHHH
Confidence 6788888777654 5899999999999999999999987 88888876532110000 000000000000000
Q ss_pred HHHHHHHHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccC
Q 021980 156 KEIFQRIVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKL 235 (304)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 235 (304)
.....+............+... ....... ......+.+.+..+.........|++ ..+....+++|
T Consensus 232 ~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~fd~~~t~~~~gf~~~~~yy~----------~~s~~~~L~~I 297 (388)
T PLN02511 232 AKALRKIFAKHALLFEGLGGEY---NIPLVAN-AKTVRDFDDGLTRVSFGFKSVDAYYS----------NSSSSDSIKHV 297 (388)
T ss_pred HHHHHHHHHHHHHHHhhCCCcc---CHHHHHh-CCCHHHHHHhhhhhcCCCCCHHHHHH----------HcCchhhhccC
Confidence 0000000000000000000000 0000000 00000111112221111111222221 11234567899
Q ss_pred CCceEEEecCCCCCCCcHHH-HHHHHhCCCceEEEe-CCCCCCCccChHH------HHHHHHHHHhccCCCCc
Q 021980 236 SCPLLLLWGDLDPWVGSAKA-TRIKEFYPNTTLVNF-QAGHCPHDEVPEL------VNKALMDWLSTVKPQAS 300 (304)
Q Consensus 236 ~~P~lii~G~~D~~~~~~~~-~~~~~~~~~~~~~~~-~~GH~~~~e~p~~------~~~~i~~fl~~~~~~~~ 300 (304)
++|+|+|+|++|++++.+.. ..+.+.+|+++++++ ++||+.++|+|+. +++.+.+||+......+
T Consensus 298 ~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~~~ 370 (388)
T PLN02511 298 RVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEGKS 370 (388)
T ss_pred CCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHhcc
Confidence 99999999999999998765 456778999999988 6899999999987 48999999976544433
No 41
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.96 E-value=3.8e-29 Score=186.45 Aligned_cols=244 Identities=20% Similarity=0.335 Sum_probs=170.7
Q ss_pred cEEEEcCeeEEEEecCCCC-cEEEEccc-CCChhhHHhchHHHhc--cCcEEEecCCCCCCCCcchhhhchhhH---HHH
Q 021980 12 NFWTWRGHKIHYVVQGEGS-PVVLIHGF-GASAFHWRYNIPELAK--RYKVYAVDLLGFGWSEKAIIEYDAMVW---KDQ 84 (304)
Q Consensus 12 ~~~~~~g~~~~y~~~g~g~-~iv~lHG~-~~~~~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~---~~~ 84 (304)
.-+-++|..++|...|.|+ .||++.|. |++...|.+++..+.+ .+++|++|.||+|.|.++...+..+.+ +++
T Consensus 24 ~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~ 103 (277)
T KOG2984|consen 24 SKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEY 103 (277)
T ss_pred heeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHH
Confidence 3467999999999999987 57888996 5566779988887743 389999999999999887665554443 356
Q ss_pred HHHHHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHh
Q 021980 85 IVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVL 164 (304)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (304)
..++++++..+++.|+|+|=||.-|+..|+++++.|.++++.++.+..... ....+ +.+.+
T Consensus 104 avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~-------~~ma~-----kgiRd------- 164 (277)
T KOG2984|consen 104 AVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHL-------GAMAF-----KGIRD------- 164 (277)
T ss_pred HHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecch-------hHHHH-----hchHH-------
Confidence 677888999999999999999999999999999999999999876542211 00011 11110
Q ss_pred hhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHH-hhccccchhhhhccCCCceEEEe
Q 021980 165 GFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFM-LNQSKYTLDSVLSKLSCPLLLLW 243 (304)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~i~~P~lii~ 243 (304)
...|..+....+. ..|. .+++... ...+.....++. ..+.++ .+-.+++++||++|++
T Consensus 165 -v~kWs~r~R~P~e----~~Yg-----~e~f~~~----------wa~wvD~v~qf~~~~dG~f-Cr~~lp~vkcPtli~h 223 (277)
T KOG2984|consen 165 -VNKWSARGRQPYE----DHYG-----PETFRTQ----------WAAWVDVVDQFHSFCDGRF-CRLVLPQVKCPTLIMH 223 (277)
T ss_pred -HhhhhhhhcchHH----HhcC-----HHHHHHH----------HHHHHHHHHHHhhcCCCch-HhhhcccccCCeeEee
Confidence 0111111100000 0000 0011110 001111111111 112233 4556899999999999
Q ss_pred cCCCCCCCcHHHHHHHHhCCCceEEEe-CCCCCCCccChHHHHHHHHHHHhcc
Q 021980 244 GDLDPWVGSAKATRIKEFYPNTTLVNF-QAGHCPHDEVPELVNKALMDWLSTV 295 (304)
Q Consensus 244 G~~D~~~~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~~~ 295 (304)
|+.|++++...+-.+.+..+.+++.++ +++|+.|+.-+++||.++.+||++.
T Consensus 224 G~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 224 GGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred CCcCCCCCCCCccchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 999999999999999999999999999 6899999999999999999999865
No 42
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=1e-25 Score=194.22 Aligned_cols=272 Identities=15% Similarity=0.168 Sum_probs=161.9
Q ss_pred EEcCeeEEEEecCC-----CCcEEEEcccCCCh-------------hhHHhchH---HHh-ccCcEEEecCCCCCCCCc-
Q 021980 15 TWRGHKIHYVVQGE-----GSPVVLIHGFGASA-------------FHWRYNIP---ELA-KRYKVYAVDLLGFGWSEK- 71 (304)
Q Consensus 15 ~~~g~~~~y~~~g~-----g~~iv~lHG~~~~~-------------~~~~~~~~---~l~-~~~~vi~~D~~G~G~S~~- 71 (304)
++...+++|++.|. ...||+.|++++++ .+|+.++. .+. ++|-||++|..|-|.|..
T Consensus 37 ~l~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p 116 (389)
T PRK06765 37 TIPDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDP 116 (389)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCC
Confidence 45668899999985 25678889998854 23766553 243 469999999998764211
Q ss_pred -----------c---------hhhhchhhHHHHHHHHHHHhcCCCeE-EEEechhHHHHHHHHhcCCcceeEEEEecCCC
Q 021980 72 -----------A---------IIEYDAMVWKDQIVDFLKEIVKEPAV-LVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 130 (304)
Q Consensus 72 -----------~---------~~~~~~~~~~~~l~~~~~~~~~~~~~-lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~ 130 (304)
+ ...++..++++++.++++++++++++ ++||||||++|+.+|.++|++++++|++++.+
T Consensus 117 ~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~ 196 (389)
T PRK06765 117 NVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNP 196 (389)
T ss_pred CCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCC
Confidence 1 11367788899999999999999986 99999999999999999999999999998764
Q ss_pred CCCCCCCCCCchhhhHHHHHH-hh-------------HHH--HHHHHHHhhhhhhhhcchhHHHHHhHhhhcCC------
Q 021980 131 QFGDGRKGSNQSEESTLQKVF-LK-------------PLK--EIFQRIVLGFLFWQAKQPARIVSVLKSVYINS------ 188 (304)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~-~~-------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 188 (304)
....... ..........+ .. +.. ....+... .+ ...+..+...+.......
T Consensus 197 ~~~~~~~---~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~---~~-~~s~~~~~~~f~r~~~~~~~~~~~ 269 (389)
T PRK06765 197 QNDAWTS---VNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMT---MN-AFDEHFYETTFPRNASIEVDPYEK 269 (389)
T ss_pred CCChhHH---HHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHH---HH-cCCHHHHHHHcCcCcccccccccc
Confidence 3211100 00000000000 00 000 00000000 00 000000000000000000
Q ss_pred ----CCCChHHHHhhhCCCCCCchHHHHHHHHHHH-Hhh--ccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHh
Q 021980 189 ----SNVDDYLVESITRPAADPNAAEVYYRLMTRF-MLN--QSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEF 261 (304)
Q Consensus 189 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 261 (304)
..+..|+.....+.....+ .+.+..+.... ..+ ....++.+.+.+|++|+|+|+|++|.++|++..+.+.+.
T Consensus 270 ~~~~~~~e~yl~~~~~~~~~~~D-an~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~ 348 (389)
T PRK06765 270 VSTLTSFEKEINKATYRRAELVD-ANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDI 348 (389)
T ss_pred ccchhhHHHHHHHHHHHhhhccC-hhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHH
Confidence 0111222211111111111 11121111111 011 111146677889999999999999999999999999988
Q ss_pred CC----CceEEEeC--CCCCCCccChHHHHHHHHHHHhc
Q 021980 262 YP----NTTLVNFQ--AGHCPHDEVPELVNKALMDWLST 294 (304)
Q Consensus 262 ~~----~~~~~~~~--~GH~~~~e~p~~~~~~i~~fl~~ 294 (304)
+| ++++++++ +||++++|+|+++++.|.+||++
T Consensus 349 lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 349 LQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred hhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 86 57888883 79999999999999999999975
No 43
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.95 E-value=9.2e-26 Score=195.23 Aligned_cols=254 Identities=20% Similarity=0.267 Sum_probs=155.4
Q ss_pred EEEEcCeeEEEEecCC-----CCcEEEEcccCCChhhHHhchHHHh-ccCcEEEecCCCCCCCCcchh-hhchhhHHHHH
Q 021980 13 FWTWRGHKIHYVVQGE-----GSPVVLIHGFGASAFHWRYNIPELA-KRYKVYAVDLLGFGWSEKAII-EYDAMVWKDQI 85 (304)
Q Consensus 13 ~~~~~g~~~~y~~~g~-----g~~iv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~l 85 (304)
+..-+|..++|..+.+ .++|||+||++++...|+.+++.|. .+|+|+++|+||||.|+.... ..+...+++++
T Consensus 115 ~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl 194 (395)
T PLN02652 115 FYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDT 194 (395)
T ss_pred EECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHH
Confidence 4455677888877643 2478999999999999999999996 579999999999999986421 23455667788
Q ss_pred HHHHHHhcC----CCeEEEEechhHHHHHHHHhcCC---cceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHH
Q 021980 86 VDFLKEIVK----EPAVLVGNSLGGFAALVAAVGLP---DQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEI 158 (304)
Q Consensus 86 ~~~~~~~~~----~~~~lvGhS~Gg~va~~~a~~~p---~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (304)
.++++.+.. .+++|+||||||.+++.++. +| ++++++|+.+|...... . . .+... ....
T Consensus 195 ~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~----~-~----~~~~~----~~~l 260 (395)
T PLN02652 195 EAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKP----A-H----PIVGA----VAPI 260 (395)
T ss_pred HHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECccccccc----c-h----HHHHH----HHHH
Confidence 888777642 37999999999999998765 55 48999999876432110 0 0 00000 0010
Q ss_pred HHHHHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCch--HHHHHHHHHHHHhhccccchhhhhccCC
Q 021980 159 FQRIVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNA--AEVYYRLMTRFMLNQSKYTLDSVLSKLS 236 (304)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 236 (304)
+......+.. ..... ...............+..+...... ....+... .. .....+.+.+|+
T Consensus 261 ~~~~~p~~~~-~~~~~---------~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~-~~-----~~~l~~~L~~I~ 324 (395)
T PLN02652 261 FSLVAPRFQF-KGANK---------RGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEIL-RI-----SSYLTRNFKSVT 324 (395)
T ss_pred HHHhCCCCcc-cCccc---------ccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHH-HH-----HHHHHhhcccCC
Confidence 1000000000 00000 0000000000111111111110000 01111110 00 011345578899
Q ss_pred CceEEEecCCCCCCCcHHHHHHHHhCC--CceEEEe-CCCCCCCcc-ChHHHHHHHHHHHhccC
Q 021980 237 CPLLLLWGDLDPWVGSAKATRIKEFYP--NTTLVNF-QAGHCPHDE-VPELVNKALMDWLSTVK 296 (304)
Q Consensus 237 ~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~-~~GH~~~~e-~p~~~~~~i~~fl~~~~ 296 (304)
+|+|+|+|++|.++|++.++++.+..+ +.++.++ +++|.++.| .|+++.+.|.+||....
T Consensus 325 vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 325 VPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRL 388 (395)
T ss_pred CCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999998877754 3678888 578998776 89999999999997644
No 44
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.94 E-value=6.9e-26 Score=183.55 Aligned_cols=249 Identities=20% Similarity=0.348 Sum_probs=157.4
Q ss_pred CCCcEEEEcccCCChhhHHhchHHHhcc--CcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhc----CCCeEEEE
Q 021980 28 EGSPVVLIHGFGASAFHWRYNIPELAKR--YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIV----KEPAVLVG 101 (304)
Q Consensus 28 ~g~~iv~lHG~~~~~~~~~~~~~~l~~~--~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~lvG 101 (304)
+.||++++||+-+|...|+.+...|++. .+++++|.|.||.|.... .++...+++++..|++... ..+++|+|
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~-~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~G 129 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT-VHNYEAMAEDVKLFIDGVGGSTRLDPVVLLG 129 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc-ccCHHHHHHHHHHHHHHcccccccCCceecc
Confidence 5799999999999999999999999764 799999999999997642 3445667899999999874 56899999
Q ss_pred echhH-HHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHH
Q 021980 102 NSLGG-FAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSV 180 (304)
Q Consensus 102 hS~Gg-~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (304)
||||| .+++.++..+|+.+.++++++.++........ ...+.+.......... +. ..........
T Consensus 130 HsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~---e~~e~i~~m~~~d~~~-------~~----~~~rke~~~~ 195 (315)
T KOG2382|consen 130 HSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYG---EYRELIKAMIQLDLSI-------GV----SRGRKEALKS 195 (315)
T ss_pred cCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccc---hHHHHHHHHHhccccc-------cc----cccHHHHHHH
Confidence 99999 78888889999999999999865531111100 0001111000000000 00 0000000000
Q ss_pred hHhhhcCCCCCChHHHHhhhC-CCCCC----chHHHHHHHHHHHHhhccccchhhhh--ccCCCceEEEecCCCCCCCcH
Q 021980 181 LKSVYINSSNVDDYLVESITR-PAADP----NAAEVYYRLMTRFMLNQSKYTLDSVL--SKLSCPLLLLWGDLDPWVGSA 253 (304)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~P~lii~G~~D~~~~~~ 253 (304)
+..... ...+..++...+.+ ..... -......+...... .......+ ...+.||++|+|.++..++.+
T Consensus 196 l~~~~~-d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~----~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~ 270 (315)
T KOG2382|consen 196 LIEVGF-DNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYE----ILSYWADLEDGPYTGPVLFIKGLQSKFVPDE 270 (315)
T ss_pred HHHHhc-chHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHH----hhcccccccccccccceeEEecCCCCCcChh
Confidence 000000 00000111111110 00000 00111111111111 11112222 667899999999999999999
Q ss_pred HHHHHHHhCCCceEEEeC-CCCCCCccChHHHHHHHHHHHhccC
Q 021980 254 KATRIKEFYPNTTLVNFQ-AGHCPHDEVPELVNKALMDWLSTVK 296 (304)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~-~GH~~~~e~p~~~~~~i~~fl~~~~ 296 (304)
....+.+.+|..++..++ +|||+|.|+|++|.+.|.+|+.++.
T Consensus 271 ~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 271 HYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred HHHHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 999999999999999995 9999999999999999999997653
No 45
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.94 E-value=2e-24 Score=180.12 Aligned_cols=271 Identities=24% Similarity=0.295 Sum_probs=164.2
Q ss_pred CCCCCCCccEEEEcCeeEEEEecCC---C-CcEEEEcccCCChhhHHhchHHHh-ccCcEEEecCCCCCCCC-cc-hhhh
Q 021980 4 LPFKPEGYNFWTWRGHKIHYVVQGE---G-SPVVLIHGFGASAFHWRYNIPELA-KRYKVYAVDLLGFGWSE-KA-IIEY 76 (304)
Q Consensus 4 ~~~~~~~~~~~~~~g~~~~y~~~g~---g-~~iv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~-~~-~~~~ 76 (304)
+|.......|.+.+|.+++|..+-. . .+||++||.+.+...|..++..|. .+|.|+++|+||||+|. .. ..--
T Consensus 5 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~ 84 (298)
T COG2267 5 VPRTRTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVD 84 (298)
T ss_pred cccccccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCch
Confidence 3445556689999999999988742 2 568999999999999999888885 57999999999999996 22 1122
Q ss_pred chhhHHHHHHHHHHHhc----CCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHh
Q 021980 77 DAMVWKDQIVDFLKEIV----KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFL 152 (304)
Q Consensus 77 ~~~~~~~~l~~~~~~~~----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (304)
+...+.+++..+++... ..+++|+||||||.|++.++.+++..|.++|+.+|...... ........
T Consensus 85 ~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~----------~~~~~~~~ 154 (298)
T COG2267 85 SFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG----------AILRLILA 154 (298)
T ss_pred hHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh----------hHHHHHHH
Confidence 35667788888887765 35899999999999999999999999999999987543211 00000000
Q ss_pred hHHHHHHHHHHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhh-CCCCCCch-HHHHHHHHHHHHhhccccchhh
Q 021980 153 KPLKEIFQRIVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESIT-RPAADPNA-AEVYYRLMTRFMLNQSKYTLDS 230 (304)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 230 (304)
........+....+.... . . ..........-+....+.+. .+...... ...++....... .....+
T Consensus 155 ~~~~~~~~~~~p~~~~~~-----~-~--~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~----~~~~~~ 222 (298)
T COG2267 155 RLALKLLGRIRPKLPVDS-----N-L--LEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAG----RVPALR 222 (298)
T ss_pred HHhcccccccccccccCc-----c-c--ccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhh----cccchh
Confidence 000000000000000000 0 0 00000000000111112111 11111111 111111111111 111222
Q ss_pred hhccCCCceEEEecCCCCCCC-cHHHHHHHHhC--CCceEEEe-CCCCCCCcc-Ch--HHHHHHHHHHHhccC
Q 021980 231 VLSKLSCPLLLLWGDLDPWVG-SAKATRIKEFY--PNTTLVNF-QAGHCPHDE-VP--ELVNKALMDWLSTVK 296 (304)
Q Consensus 231 ~l~~i~~P~lii~G~~D~~~~-~~~~~~~~~~~--~~~~~~~~-~~GH~~~~e-~p--~~~~~~i~~fl~~~~ 296 (304)
....+++|+|+++|++|.+++ .+...++.+.. ++.+++++ ++.|-++.| .. +++.+.+.+|+.+..
T Consensus 223 ~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 223 DAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred ccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 346789999999999999999 57666665554 56678888 688998876 34 678888999987654
No 46
>PRK10985 putative hydrolase; Provisional
Probab=99.92 E-value=1.3e-23 Score=178.90 Aligned_cols=263 Identities=17% Similarity=0.200 Sum_probs=141.1
Q ss_pred cEEEEcCeeEEEEec--C----CCCcEEEEcccCCChhh--HHhchHHHh-ccCcEEEecCCCCCCCCcch-hhhchhhH
Q 021980 12 NFWTWRGHKIHYVVQ--G----EGSPVVLIHGFGASAFH--WRYNIPELA-KRYKVYAVDLLGFGWSEKAI-IEYDAMVW 81 (304)
Q Consensus 12 ~~~~~~g~~~~y~~~--g----~g~~iv~lHG~~~~~~~--~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~-~~~~~~~~ 81 (304)
...+.||..+.+... . ++++||++||++++... ++.++..|. .+|+|+++|+||||.|.... ..+.. ..
T Consensus 35 ~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~-~~ 113 (324)
T PRK10985 35 RLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHS-GE 113 (324)
T ss_pred EEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECC-Cc
Confidence 355567776554321 1 24679999999876443 455677775 46999999999999875321 11211 12
Q ss_pred HHHHHHHH---H-HhcCCCeEEEEechhHHHHHHHHhcCCcc--eeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHH
Q 021980 82 KDQIVDFL---K-EIVKEPAVLVGNSLGGFAALVAAVGLPDQ--VTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPL 155 (304)
Q Consensus 82 ~~~l~~~~---~-~~~~~~~~lvGhS~Gg~va~~~a~~~p~~--v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (304)
.+|+.+++ . .+...+++++||||||.++..++..+++. +.++|+++++....... ......+...+...+
T Consensus 114 ~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~----~~~~~~~~~~~~~~l 189 (324)
T PRK10985 114 TEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACS----YRMEQGFSRVYQRYL 189 (324)
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHH----HHHhhhHHHHHHHHH
Confidence 24443333 2 24567899999999999988888877654 88899888643211000 000000000000000
Q ss_pred HHHHHHHHhh-hhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhcc
Q 021980 156 KEIFQRIVLG-FLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSK 234 (304)
Q Consensus 156 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 234 (304)
.....+.... ...+....+..... +. .. .....+.+.+..+.........++.. .+..+.+++
T Consensus 190 ~~~l~~~~~~~~~~~~~~~~~~~~~-~~----~~-~~~~~fd~~~~~~~~g~~~~~~~y~~----------~~~~~~l~~ 253 (324)
T PRK10985 190 LNLLKANAARKLAAYPGTLPINLAQ-LK----SV-RRLREFDDLITARIHGFADAIDYYRQ----------CSALPLLNQ 253 (324)
T ss_pred HHHHHHHHHHHHHhccccccCCHHH-Hh----cC-CcHHHHhhhheeccCCCCCHHHHHHH----------CChHHHHhC
Confidence 0000000000 00000000000000 00 00 00001111112221112222222221 123456789
Q ss_pred CCCceEEEecCCCCCCCcHHHHHHHHhCCCceEEEe-CCCCCCCccCh----H-HHHHHHHHHHhcc
Q 021980 235 LSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLVNF-QAGHCPHDEVP----E-LVNKALMDWLSTV 295 (304)
Q Consensus 235 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~p----~-~~~~~i~~fl~~~ 295 (304)
|++|+++|+|++|++++.+....+.+..++.+++++ ++||++++|.. . -..+.+.+|+.+.
T Consensus 254 i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 254 IRKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred CCCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 999999999999999998888888888899888887 68999998852 2 3456677777543
No 47
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.92 E-value=4.7e-23 Score=179.81 Aligned_cols=211 Identities=19% Similarity=0.245 Sum_probs=133.4
Q ss_pred cEEEE-cccCCCh-hhHHhchHHHhc-cCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHh---cCCCeEEEEech
Q 021980 31 PVVLI-HGFGASA-FHWRYNIPELAK-RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI---VKEPAVLVGNSL 104 (304)
Q Consensus 31 ~iv~l-HG~~~~~-~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~lvGhS~ 104 (304)
|+|++ ||+.+.. ..|..+.+.|.+ +|.|+++|+||||.|.......+.....+.+.+++... +.+++.++||||
T Consensus 195 P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~ 274 (414)
T PRK05077 195 PTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRF 274 (414)
T ss_pred cEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcccCcccEEEEEECh
Confidence 45555 5555543 568887888865 69999999999999965322223333445666666554 457899999999
Q ss_pred hHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhHhh
Q 021980 105 GGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLKSV 184 (304)
Q Consensus 105 Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (304)
||.+|+.+|..+|++|+++|++++....... ....... +.... ...+...
T Consensus 275 GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~-------~~~~~~~-----~p~~~------------------~~~la~~ 324 (414)
T PRK05077 275 GANVAVRLAYLEPPRLKAVACLGPVVHTLLT-------DPKRQQQ-----VPEMY------------------LDVLASR 324 (414)
T ss_pred HHHHHHHHHHhCCcCceEEEEECCccchhhc-------chhhhhh-----chHHH------------------HHHHHHH
Confidence 9999999999999999999999764310000 0000000 00000 0000000
Q ss_pred hcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhh-ccCCCceEEEecCCCCCCCcHHHHHHHHhCC
Q 021980 185 YINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVL-SKLSCPLLLLWGDLDPWVGSAKATRIKEFYP 263 (304)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~ 263 (304)
.... . .. ...+...+..+. ......+ +++++|+|+|+|++|.++|.+.++.+.+..|
T Consensus 325 lg~~-~-------------~~---~~~l~~~l~~~s-----l~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~ 382 (414)
T PRK05077 325 LGMH-D-------------AS---DEALRVELNRYS-----LKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSA 382 (414)
T ss_pred hCCC-C-------------CC---hHHHHHHhhhcc-----chhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCC
Confidence 0000 0 00 000111111100 0001112 5799999999999999999999999999999
Q ss_pred CceEEEeCCCCCCCccChHHHHHHHHHHHhcc
Q 021980 264 NTTLVNFQAGHCPHDEVPELVNKALMDWLSTV 295 (304)
Q Consensus 264 ~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~ 295 (304)
++++++++.. ++.|.|+++.+.+.+||.+.
T Consensus 383 ~~~l~~i~~~--~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 383 DGKLLEIPFK--PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred CCeEEEccCC--CccCCHHHHHHHHHHHHHHH
Confidence 9999988654 57789999999999999764
No 48
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.92 E-value=7.7e-24 Score=171.69 Aligned_cols=218 Identities=22% Similarity=0.350 Sum_probs=130.3
Q ss_pred CcEEEecCCCCCCCCc----chhhhchhhHHHHHHHHHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCC
Q 021980 56 YKVYAVDLLGFGWSEK----AIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 131 (304)
Q Consensus 56 ~~vi~~D~~G~G~S~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~ 131 (304)
|+|+++|+||+|.|++ ....++...+++++..+++.++.++++++||||||++++.+|..+|++|+++|++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~- 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP- 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS-
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec-
Confidence 6899999999999995 34567888888999999999999999999999999999999999999999999998742
Q ss_pred CCCCCCCCCchhhhHHHHHHhhH--HHHHHHHHHhhhhhhhhc-chhHHH---HHhHhhhcCCCCCChHHHHhhhCCCCC
Q 021980 132 FGDGRKGSNQSEESTLQKVFLKP--LKEIFQRIVLGFLFWQAK-QPARIV---SVLKSVYINSSNVDDYLVESITRPAAD 205 (304)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (304)
............. .................. ...... .......... .........+... ..
T Consensus 80 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~ 147 (230)
T PF00561_consen 80 ----------DLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVED-FLKQFQSQQYARF-AE 147 (230)
T ss_dssp ----------HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHT-CH
T ss_pred ----------cchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccc-hhhccchhhhhHH-HH
Confidence 0000000000000 000000000000000000 000000 0000000000 0000000000000 00
Q ss_pred CchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCCCceEEEeC-CCCCCCccChHHH
Q 021980 206 PNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLVNFQ-AGHCPHDEVPELV 284 (304)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~-~GH~~~~e~p~~~ 284 (304)
.......... ........+....+..+++|+++++|++|.++|.+....+.+.+|+.++++++ +||+.++|.|+++
T Consensus 148 ~~~~~~~~~~---~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~ 224 (230)
T PF00561_consen 148 TDAFDNMFWN---ALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEF 224 (230)
T ss_dssp HHHHHHHHHH---HHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHH
T ss_pred HHHHhhhccc---cccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhh
Confidence 0000000110 00011122344567889999999999999999999999999999999999995 6999999999999
Q ss_pred HHHHH
Q 021980 285 NKALM 289 (304)
Q Consensus 285 ~~~i~ 289 (304)
++.|.
T Consensus 225 ~~~i~ 229 (230)
T PF00561_consen 225 NEIII 229 (230)
T ss_dssp HHHHH
T ss_pred hhhhc
Confidence 99875
No 49
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.91 E-value=1e-22 Score=162.53 Aligned_cols=257 Identities=22% Similarity=0.344 Sum_probs=160.0
Q ss_pred cEEEEcCeeEEEEecCC----CC--cEEEEcccCCCh-hhHHhchHHHh-ccCcEEEecCCCCCCCCcch-hhhchhhHH
Q 021980 12 NFWTWRGHKIHYVVQGE----GS--PVVLIHGFGASA-FHWRYNIPELA-KRYKVYAVDLLGFGWSEKAI-IEYDAMVWK 82 (304)
Q Consensus 12 ~~~~~~g~~~~y~~~g~----g~--~iv~lHG~~~~~-~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~-~~~~~~~~~ 82 (304)
.+.+.+|.++++..+-+ .+ -|+++||++... ..++..+..|+ .+|.|+++|++|||+|+... .-.+....+
T Consensus 31 ~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v 110 (313)
T KOG1455|consen 31 FFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVV 110 (313)
T ss_pred eEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHH
Confidence 56778899999887643 22 377899998865 66777888886 46999999999999998642 112455567
Q ss_pred HHHHHHHHHhc------CCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHH
Q 021980 83 DQIVDFLKEIV------KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLK 156 (304)
Q Consensus 83 ~~l~~~~~~~~------~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (304)
+|+.++.+... ..+.+|+||||||.|++.++.++|+..+++|++.|-....+..+... ....+ ...+.
T Consensus 111 ~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p-----~v~~~-l~~l~ 184 (313)
T KOG1455|consen 111 DDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHP-----PVISI-LTLLS 184 (313)
T ss_pred HHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCc-----HHHHH-HHHHH
Confidence 88888876532 24789999999999999999999999999999987654444332211 11111 11111
Q ss_pred HHHHHHHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhh-hCCCCCCc--hHHHHHHHHHHHHhhccccchhhhhc
Q 021980 157 EIFQRIVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESI-TRPAADPN--AAEVYYRLMTRFMLNQSKYTLDSVLS 233 (304)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~ 233 (304)
... -.|+ ..|.+- .....+.+ ......+ ..+..... .....+++++. ..++.+.+.
T Consensus 185 ~li-------P~wk-~vp~~d--~~~~~~kd-----p~~r~~~~~npl~y~g~pRl~T~~ElLr~------~~~le~~l~ 243 (313)
T KOG1455|consen 185 KLI-------PTWK-IVPTKD--IIDVAFKD-----PEKRKILRSDPLCYTGKPRLKTAYELLRV------TADLEKNLN 243 (313)
T ss_pred HhC-------Ccee-ecCCcc--ccccccCC-----HHHHHHhhcCCceecCCccHHHHHHHHHH------HHHHHHhcc
Confidence 100 0111 011110 00000000 0001110 11111111 11222333221 124567788
Q ss_pred cCCCceEEEecCCCCCCCcHHHHHHHHhCC--CceEEEeC-CCCCCCc----cChHHHHHHHHHHHhcc
Q 021980 234 KLSCPLLLLWGDLDPWVGSAKATRIKEFYP--NTTLVNFQ-AGHCPHD----EVPELVNKALMDWLSTV 295 (304)
Q Consensus 234 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~-~GH~~~~----e~p~~~~~~i~~fl~~~ 295 (304)
++++|.+|+||++|.++.++.++.+.+..+ +.++..++ ..|..+. |+-+.+...|.+||++.
T Consensus 244 ~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 244 EVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred cccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 999999999999999999999999988865 45677775 6898775 44556667788888764
No 50
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.91 E-value=1.3e-22 Score=154.21 Aligned_cols=220 Identities=22% Similarity=0.306 Sum_probs=146.7
Q ss_pred CCcEEEEcccCCChhhHHhchHHHhc-cCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHH---hcCCCeEEEEech
Q 021980 29 GSPVVLIHGFGASAFHWRYNIPELAK-RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKE---IVKEPAVLVGNSL 104 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~lvGhS~ 104 (304)
+..||||||+.++....+.+...|.+ +|+|.+|.+||||-........+..+|-.++.+..+. .+.+.+.++|-||
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSm 94 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLSM 94 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeecc
Confidence 37899999999999999999999975 6999999999999887655566667777766655444 4567899999999
Q ss_pred hHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhHhh
Q 021980 105 GGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLKSV 184 (304)
Q Consensus 105 Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (304)
||.+++.+|.++| ++++|.++++-...... ..+.++...++.. -....+....+.....
T Consensus 95 GGv~alkla~~~p--~K~iv~m~a~~~~k~~~-------------~iie~~l~y~~~~----kk~e~k~~e~~~~e~~-- 153 (243)
T COG1647 95 GGVFALKLAYHYP--PKKIVPMCAPVNVKSWR-------------IIIEGLLEYFRNA----KKYEGKDQEQIDKEMK-- 153 (243)
T ss_pred hhHHHHHHHhhCC--ccceeeecCCcccccch-------------hhhHHHHHHHHHh----hhccCCCHHHHHHHHH--
Confidence 9999999999999 88999888643211100 1111111111100 0000111111111000
Q ss_pred hcCCCCCChHHHHhhhCCCCCCch-HHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCC
Q 021980 185 YINSSNVDDYLVESITRPAADPNA-AEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYP 263 (304)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~ 263 (304)
.....+.. ...++.++. +....+..|..|++++.|++|+.+|.+.++.+....-
T Consensus 154 ----------------~~~~~~~~~~~~~~~~i~---------~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~ 208 (243)
T COG1647 154 ----------------SYKDTPMTTTAQLKKLIK---------DARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVE 208 (243)
T ss_pred ----------------HhhcchHHHHHHHHHHHH---------HHHhhhhhcccchhheecccCCCCCHHHHHHHHHhcc
Confidence 00000111 111222211 2344567899999999999999999999998877753
Q ss_pred --CceEEEe-CCCCCC-CccChHHHHHHHHHHHhc
Q 021980 264 --NTTLVNF-QAGHCP-HDEVPELVNKALMDWLST 294 (304)
Q Consensus 264 --~~~~~~~-~~GH~~-~~e~p~~~~~~i~~fl~~ 294 (304)
..++.++ ++||.+ +.++.|.+.+.|..||+.
T Consensus 209 s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 209 SDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred CCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 3578888 699975 456899999999999963
No 51
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.91 E-value=1.3e-22 Score=172.86 Aligned_cols=258 Identities=18% Similarity=0.204 Sum_probs=146.5
Q ss_pred EEEEcCeeEEEEecC---CCCcEEEEcccCCChh-hH-------------------------HhchHHHh-ccCcEEEec
Q 021980 13 FWTWRGHKIHYVVQG---EGSPVVLIHGFGASAF-HW-------------------------RYNIPELA-KRYKVYAVD 62 (304)
Q Consensus 13 ~~~~~g~~~~y~~~g---~g~~iv~lHG~~~~~~-~~-------------------------~~~~~~l~-~~~~vi~~D 62 (304)
|.+.+|.++++..+. +...||++||++++.. .+ ..+++.|. .+|+|+++|
T Consensus 2 ~~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D 81 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLD 81 (332)
T ss_pred ccCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEec
Confidence 345688999888764 2347889999998775 11 23567774 579999999
Q ss_pred CCCCCCCCcch--hh--hchhhHHHHHHHHHHHhc------------------------CCCeEEEEechhHHHHHHHHh
Q 021980 63 LLGFGWSEKAI--IE--YDAMVWKDQIVDFLKEIV------------------------KEPAVLVGNSLGGFAALVAAV 114 (304)
Q Consensus 63 ~~G~G~S~~~~--~~--~~~~~~~~~l~~~~~~~~------------------------~~~~~lvGhS~Gg~va~~~a~ 114 (304)
+||||+|+... .. .+...+++++.++++... ..|++|+||||||.+++.++.
T Consensus 82 ~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~ 161 (332)
T TIGR01607 82 LQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLE 161 (332)
T ss_pred ccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHH
Confidence 99999997531 11 256667788888876532 247999999999999999987
Q ss_pred cCCc--------ceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhHhhhc
Q 021980 115 GLPD--------QVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLKSVYI 186 (304)
Q Consensus 115 ~~p~--------~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (304)
.+++ .++++|++++........... .. .+.... ..+.....+....+ . ... ......
T Consensus 162 ~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~-~~---~~~~~~-~~l~~~~~~~~p~~-----~-~~~----~~~~~~ 226 (332)
T TIGR01607 162 LLGKSNENNDKLNIKGCISLSGMISIKSVGSDD-SF---KFKYFY-LPVMNFMSRVFPTF-----R-ISK----KIRYEK 226 (332)
T ss_pred HhccccccccccccceEEEeccceEEecccCCC-cc---hhhhhH-HHHHHHHHHHCCcc-----c-ccC----cccccc
Confidence 6543 588888877643211100000 00 000000 00000000000000 0 000 000000
Q ss_pred CCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccC--CCceEEEecCCCCCCCcHHHHHHHHhC--
Q 021980 187 NSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKL--SCPLLLLWGDLDPWVGSAKATRIKEFY-- 262 (304)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~-- 262 (304)
++...+.+..+.+... . ......+..++.. .. ...+.+..+ ++|+|+|+|++|.+++++.+..+.+..
T Consensus 227 ~~~~~~~~~~Dp~~~~-~-~~s~~~~~~l~~~-~~-----~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~ 298 (332)
T TIGR01607 227 SPYVNDIIKFDKFRYD-G-GITFNLASELIKA-TD-----TLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSI 298 (332)
T ss_pred ChhhhhHHhcCccccC-C-cccHHHHHHHHHH-HH-----HHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccC
Confidence 0000011111111100 0 0001111111111 00 112234445 799999999999999999888887654
Q ss_pred CCceEEEe-CCCCCCCccC-hHHHHHHHHHHHh
Q 021980 263 PNTTLVNF-QAGHCPHDEV-PELVNKALMDWLS 293 (304)
Q Consensus 263 ~~~~~~~~-~~GH~~~~e~-p~~~~~~i~~fl~ 293 (304)
++.++.++ +++|.++.|. ++++.+.|.+||.
T Consensus 299 ~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 299 SNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 56788888 5799999885 7899999999985
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.89 E-value=2.6e-21 Score=160.80 Aligned_cols=225 Identities=20% Similarity=0.205 Sum_probs=130.0
Q ss_pred CCCcEEEEcccCC----ChhhHHhchHHHhc-cCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHh-----cCCCe
Q 021980 28 EGSPVVLIHGFGA----SAFHWRYNIPELAK-RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI-----VKEPA 97 (304)
Q Consensus 28 ~g~~iv~lHG~~~----~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~ 97 (304)
+++++|++||++. +...|..+++.|++ +|+|+++|+||||.|+... .+...+.+++.+.++.+ +.+++
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--~~~~~~~~d~~~~~~~l~~~~~g~~~i 102 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--LGFEGIDADIAAAIDAFREAAPHLRRI 102 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHHhhCCCCCcE
Confidence 3567888887653 33345666788865 6999999999999997542 34445566777776665 35679
Q ss_pred EEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHH
Q 021980 98 VLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARI 177 (304)
Q Consensus 98 ~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (304)
+++||||||.+++.+|.. +++|+++|++++........ ........+.... ... ..|.
T Consensus 103 ~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~------~~~~~~~~~~~~~----~~~----~~~~------- 160 (274)
T TIGR03100 103 VAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQ------AASRIRHYYLGQL----LSA----DFWR------- 160 (274)
T ss_pred EEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccc------hHHHHHHHHHHHH----hCh----HHHH-------
Confidence 999999999999999865 56899999998742211100 0001111100000 000 0000
Q ss_pred HHHhHhhhcCCCCCC---hHHHHhhh-C-CCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCc
Q 021980 178 VSVLKSVYINSSNVD---DYLVESIT-R-PAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGS 252 (304)
Q Consensus 178 ~~~~~~~~~~~~~~~---~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~ 252 (304)
..+....... ..+...+. . +......... ...++.+.+..+++|+++++|++|...+
T Consensus 161 -----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~~~P~ll~~g~~D~~~~- 222 (274)
T TIGR03100 161 -----KLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGG------------LAERMKAGLERFQGPVLFILSGNDLTAQ- 222 (274)
T ss_pred -----HhcCCCccHHHHHHHHHHHHHhhhhcCCCcccch------------HHHHHHHHHHhcCCcEEEEEcCcchhHH-
Confidence 0000000000 00000000 0 0000000000 0112345567789999999999998763
Q ss_pred HHH------HHHHHhC--CCceEEEe-CCCCCCCcc-ChHHHHHHHHHHHhc
Q 021980 253 AKA------TRIKEFY--PNTTLVNF-QAGHCPHDE-VPELVNKALMDWLST 294 (304)
Q Consensus 253 ~~~------~~~~~~~--~~~~~~~~-~~GH~~~~e-~p~~~~~~i~~fl~~ 294 (304)
... ..+++.+ ++.++..+ ++||++..| .++++++.|.+||++
T Consensus 223 ~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 223 EFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred HHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 222 4455544 78888888 699999554 559999999999953
No 53
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.89 E-value=3.6e-21 Score=170.52 Aligned_cols=252 Identities=11% Similarity=0.058 Sum_probs=142.2
Q ss_pred CCcEEEEcccCCChhhHH-----hchHHHh-ccCcEEEecCCCCCCCCcc--hhhhchhhHHHHHHHHHHHhcCCCeEEE
Q 021980 29 GSPVVLIHGFGASAFHWR-----YNIPELA-KRYKVYAVDLLGFGWSEKA--IIEYDAMVWKDQIVDFLKEIVKEPAVLV 100 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~~~-----~~~~~l~-~~~~vi~~D~~G~G~S~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~lv 100 (304)
++|||++||+......|+ .++..|. ++|+|+++|++|+|.|... ..+|....+.+.+..+++..+.++++++
T Consensus 188 ~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~lv 267 (532)
T TIGR01838 188 KTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNCV 267 (532)
T ss_pred CCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEEE
Confidence 589999999988888885 5777775 5799999999999988653 2334333444555555566678899999
Q ss_pred EechhHHHH---H-HHHhcC-CcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHH--HHHHHhhhhhhhhcc
Q 021980 101 GNSLGGFAA---L-VAAVGL-PDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEI--FQRIVLGFLFWQAKQ 173 (304)
Q Consensus 101 GhS~Gg~va---~-~~a~~~-p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 173 (304)
||||||.++ + .+++.+ |++|++++++++...+..............+.. +...+... +....+...+...+.
T Consensus 268 G~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~-~e~~~~~~G~lpg~~m~~~F~~lrp 346 (532)
T TIGR01838 268 GYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAG-IERQNGGGGYLDGRQMAVTFSLLRE 346 (532)
T ss_pred EECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHH-HHHHHHhcCCCCHHHHHHHHHhcCh
Confidence 999999985 2 355555 889999999998765543211100000000000 00000000 000000000000011
Q ss_pred hhH-HHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhc----ccc---chhhhhccCCCceEEEecC
Q 021980 174 PAR-IVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQ----SKY---TLDSVLSKLSCPLLLLWGD 245 (304)
Q Consensus 174 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~l~~i~~P~lii~G~ 245 (304)
... +...+......+... .+............ ....+...+......+ ..+ +....+++|++|+++|+|+
T Consensus 347 ~~l~w~~~v~~yl~g~~~~-~fdll~Wn~D~t~l-P~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~ 424 (532)
T TIGR01838 347 NDLIWNYYVDNYLKGKSPV-PFDLLFWNSDSTNL-PGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATR 424 (532)
T ss_pred hhHHHHHHHHHHhcCCCcc-chhHHHHhccCccc-hHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeC
Confidence 111 111111111111111 11122221111111 1222222222222211 111 1234578899999999999
Q ss_pred CCCCCCcHHHHHHHHhCCCceEEEe-CCCCCCCccChHH
Q 021980 246 LDPWVGSAKATRIKEFYPNTTLVNF-QAGHCPHDEVPEL 283 (304)
Q Consensus 246 ~D~~~~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~p~~ 283 (304)
+|.++|.+.+..+.+.+++.+..++ ++||++++++|..
T Consensus 425 ~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 425 EDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred CCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCCCC
Confidence 9999999999999999998888777 6999999988863
No 54
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.88 E-value=4.4e-21 Score=157.83 Aligned_cols=263 Identities=30% Similarity=0.426 Sum_probs=150.1
Q ss_pred EEEcCeeEEEEecCC-CCcEEEEcccCCChhhHHhchHHHhc---cCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHH
Q 021980 14 WTWRGHKIHYVVQGE-GSPVVLIHGFGASAFHWRYNIPELAK---RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFL 89 (304)
Q Consensus 14 ~~~~g~~~~y~~~g~-g~~iv~lHG~~~~~~~~~~~~~~l~~---~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~ 89 (304)
....+..+.|...+. +++++++||++++...|......+.. .|+++++|+||||.|. .. .+....+++++..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~ 82 (282)
T COG0596 5 LAADGVRLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALL 82 (282)
T ss_pred ccCCCeEEEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHHHHHHH
Confidence 344566777776664 56899999999999999874333332 2899999999999997 11 223333478889999
Q ss_pred HHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCC-chhhhHHHHHHhhHHHHHHHHHHhhhhh
Q 021980 90 KEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSN-QSEESTLQKVFLKPLKEIFQRIVLGFLF 168 (304)
Q Consensus 90 ~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (304)
+.++..+++++||||||.+++.++.++|+++++++++++............ ............ ...... ......
T Consensus 83 ~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~ 158 (282)
T COG0596 83 DALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALAD--LLLGLD--AAAFAA 158 (282)
T ss_pred HHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhh--hhhccc--hhhhhh
Confidence 999988899999999999999999999999999999987543111000000 000000000000 000000 000000
Q ss_pred hhhcchhHHHHHhHh-hh-cCCCCCChHHHHhhhCCCCCCchHHHHHHHH---HHHHhhcccc-chhhhhccCCCceEEE
Q 021980 169 WQAKQPARIVSVLKS-VY-INSSNVDDYLVESITRPAADPNAAEVYYRLM---TRFMLNQSKY-TLDSVLSKLSCPLLLL 242 (304)
Q Consensus 169 ~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~l~~i~~P~lii 242 (304)
+..... ....... .. ............ . ......... .......... .....+..+++|++++
T Consensus 159 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 227 (282)
T COG0596 159 LLAALG--LLAALAAAARAGLAEALRAPLLG--------A-AAAAFARAARADLAAALLALLDRDLRAALARITVPTLII 227 (282)
T ss_pred hhhccc--ccccccccchhccccccccccch--------h-HhhhhhhhcccccchhhhcccccccchhhccCCCCeEEE
Confidence 000000 0000000 00 000000000000 0 000000000 0000000000 1234467789999999
Q ss_pred ecCCCCCCCcHHHHHHHHhCCC-ceEEEe-CCCCCCCccChHHHHHHHHHHHh
Q 021980 243 WGDLDPWVGSAKATRIKEFYPN-TTLVNF-QAGHCPHDEVPELVNKALMDWLS 293 (304)
Q Consensus 243 ~G~~D~~~~~~~~~~~~~~~~~-~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~ 293 (304)
+|++|.+.+......+.+..++ .++.++ ++||+++.|+|+.+++.+.+|+.
T Consensus 228 ~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 228 HGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred ecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 9999977766666777788885 888888 68999999999999999988553
No 55
>PRK11071 esterase YqiA; Provisional
Probab=99.88 E-value=7.7e-22 Score=154.47 Aligned_cols=182 Identities=19% Similarity=0.134 Sum_probs=120.8
Q ss_pred CcEEEEcccCCChhhHHh--chHHHhc---cCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEech
Q 021980 30 SPVVLIHGFGASAFHWRY--NIPELAK---RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSL 104 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~~~~--~~~~l~~---~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~ 104 (304)
|+|||+||++++...|+. +.+.+++ +|+|+++|+|||| ..+++.+.++++.++.++++++||||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-----------~~~~~~l~~l~~~~~~~~~~lvG~S~ 70 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-----------ADAAELLESLVLEHGGDPLGLVGSSL 70 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-----------HHHHHHHHHHHHHcCCCCeEEEEECH
Confidence 579999999999999984 3455644 6999999999985 13567888888888889999999999
Q ss_pred hHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhHhh
Q 021980 105 GGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLKSV 184 (304)
Q Consensus 105 Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (304)
||.+++.+|.++|. ++|+++|+.. ..+.+... .+ ... ..
T Consensus 71 Gg~~a~~~a~~~~~---~~vl~~~~~~-----------~~~~~~~~-------------~~------~~~--------~~ 109 (190)
T PRK11071 71 GGYYATWLSQCFML---PAVVVNPAVR-----------PFELLTDY-------------LG------ENE--------NP 109 (190)
T ss_pred HHHHHHHHHHHcCC---CEEEECCCCC-----------HHHHHHHh-------------cC------Ccc--------cc
Confidence 99999999999994 4677876421 00000000 00 000 00
Q ss_pred hcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCCC
Q 021980 185 YINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYPN 264 (304)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 264 (304)
+.. .. ......+..... ..+..+ +. ..+|+++|+|++|.++|.+.+.++.+ +
T Consensus 110 ~~~----~~------------~~~~~~~~~d~~-------~~~~~~-i~-~~~~v~iihg~~De~V~~~~a~~~~~---~ 161 (190)
T PRK11071 110 YTG----QQ------------YVLESRHIYDLK-------VMQIDP-LE-SPDLIWLLQQTGDEVLDYRQAVAYYA---A 161 (190)
T ss_pred cCC----Cc------------EEEcHHHHHHHH-------hcCCcc-CC-ChhhEEEEEeCCCCcCCHHHHHHHHH---h
Confidence 000 00 000001111110 112222 33 67788999999999999999998888 4
Q ss_pred ceEEEe-CCCCCCCccChHHHHHHHHHHHh
Q 021980 265 TTLVNF-QAGHCPHDEVPELVNKALMDWLS 293 (304)
Q Consensus 265 ~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~ 293 (304)
++.+++ +++|.. ...+++.+.+.+|++
T Consensus 162 ~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 162 CRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred cceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 566666 578876 555889999999975
No 56
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.88 E-value=5e-21 Score=164.89 Aligned_cols=256 Identities=15% Similarity=0.226 Sum_probs=139.5
Q ss_pred CCcEEEEcccCCChhhH-----HhchHHHhc-cCcEEEecCCCCCCCCcchhhhchhhHHH-HH----HHHHHHhcCCCe
Q 021980 29 GSPVVLIHGFGASAFHW-----RYNIPELAK-RYKVYAVDLLGFGWSEKAIIEYDAMVWKD-QI----VDFLKEIVKEPA 97 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~~-----~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~-~l----~~~~~~~~~~~~ 97 (304)
++|||++||+..+...+ +.+++.|.+ +|+|+++|++|+|.|+.. .+..++.. ++ ..+.+..+.+++
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~---~~~~d~~~~~~~~~v~~l~~~~~~~~i 138 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY---LTLDDYINGYIDKCVDYICRTSKLDQI 138 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc---CCHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 46899999987665554 578888865 699999999999987643 23333332 22 233344567899
Q ss_pred EEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCc----hhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcc
Q 021980 98 VLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQ----SEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQ 173 (304)
Q Consensus 98 ~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (304)
+++||||||++++.++..+|++++++|++++...+......... ...+...... ..++...... .+. ...
T Consensus 139 ~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~--~f~---~l~ 212 (350)
T TIGR01836 139 SLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTM-GNIPGELLNL--TFL---MLK 212 (350)
T ss_pred cEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhc-CCCCHHHHHH--HHH---hcC
Confidence 99999999999999999999999999999876543221110000 0000000000 0000000000 000 000
Q ss_pred hhH--HHHHhH--hhhcCCCCCChHHH-HhhhCCCCCCchHHHHHHHHHHHHhhc----cccc---hhhhhccCCCceEE
Q 021980 174 PAR--IVSVLK--SVYINSSNVDDYLV-ESITRPAADPNAAEVYYRLMTRFMLNQ----SKYT---LDSVLSKLSCPLLL 241 (304)
Q Consensus 174 ~~~--~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~l~~i~~P~li 241 (304)
|.. +..... ....+.+....++. ...... ........+.+......... .... ....++++++|+++
T Consensus 213 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d-~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvli 291 (350)
T TIGR01836 213 PFSLGYQKYVNLVDILEDERKVENFLRMEKWIFD-SPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILN 291 (350)
T ss_pred cchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcC-CcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEE
Confidence 000 000000 00011111111110 000000 00111122222222211111 0100 11236789999999
Q ss_pred EecCCCCCCCcHHHHHHHHhCCCc--eEEEeCCCCCCCccC---hHHHHHHHHHHHhc
Q 021980 242 LWGDLDPWVGSAKATRIKEFYPNT--TLVNFQAGHCPHDEV---PELVNKALMDWLST 294 (304)
Q Consensus 242 i~G~~D~~~~~~~~~~~~~~~~~~--~~~~~~~GH~~~~e~---p~~~~~~i~~fl~~ 294 (304)
++|++|.+++++.++.+.+.++.. ++.++++||+..+.. ++++...|.+||.+
T Consensus 292 v~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 292 IYAERDHLVPPDASKALNDLVSSEDYTELSFPGGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred EecCCCCcCCHHHHHHHHHHcCCCCeEEEEcCCCCEEEEECchhHhhhhHHHHHHHHh
Confidence 999999999999999998888753 455668999887654 47888999999865
No 57
>PLN02872 triacylglycerol lipase
Probab=99.86 E-value=3.6e-20 Score=159.87 Aligned_cols=282 Identities=16% Similarity=0.221 Sum_probs=151.8
Q ss_pred CCCccEEEEcCeeEEEEecC---------CCCcEEEEcccCCChhhHHh------chHHHhc-cCcEEEecCCCCCCCCc
Q 021980 8 PEGYNFWTWRGHKIHYVVQG---------EGSPVVLIHGFGASAFHWRY------NIPELAK-RYKVYAVDLLGFGWSEK 71 (304)
Q Consensus 8 ~~~~~~~~~~g~~~~y~~~g---------~g~~iv~lHG~~~~~~~~~~------~~~~l~~-~~~vi~~D~~G~G~S~~ 71 (304)
.+.++..+-||..+...... ++++|||+||++.++..|.. +...|++ +|+|+++|+||+|.|..
T Consensus 44 ~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~g 123 (395)
T PLN02872 44 CTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYG 123 (395)
T ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccC
Confidence 33344556889888876531 25789999999999988842 3334654 79999999999886532
Q ss_pred -------ch--hhhchhhHH-HHHHHHHHHh---cCCCeEEEEechhHHHHHHHHhcCCc---ceeEEEEecCCCCCCCC
Q 021980 72 -------AI--IEYDAMVWK-DQIVDFLKEI---VKEPAVLVGNSLGGFAALVAAVGLPD---QVTGVALLNSAGQFGDG 135 (304)
Q Consensus 72 -------~~--~~~~~~~~~-~~l~~~~~~~---~~~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lvli~~~~~~~~~ 135 (304)
+. .+++...++ .|+.++++.+ ..++++++||||||++++.++ .+|+ +|+++++++|.+.....
T Consensus 124 h~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~ 202 (395)
T PLN02872 124 HVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHV 202 (395)
T ss_pred CCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccC
Confidence 11 134555556 6777777765 347899999999999998544 6776 68888888876543221
Q ss_pred CCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcc--hhHHH-----------HHhHhhhcCCCCCChHHHHhhhC-
Q 021980 136 RKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQ--PARIV-----------SVLKSVYINSSNVDDYLVESITR- 201 (304)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~- 201 (304)
.. +-...+... .....+.. .+...+.... ...+. ..+..+.-.....+.-....+..
T Consensus 203 ~~----~~~~~~~~~---~~~~~~~~--~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~ 273 (395)
T PLN02872 203 TA----PLVLRMVFM---HLDQMVVA--MGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEY 273 (395)
T ss_pred CC----HHHHHHHHH---hHHHHHHH--hcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhc
Confidence 11 000000000 00000000 0000000000 00000 00000000000111111111110
Q ss_pred -CCC-CCchHHHHHHHHHHHHhhcccc-------------chhhhhccC--CCceEEEecCCCCCCCcHHHHHHHHhCCC
Q 021980 202 -PAA-DPNAAEVYYRLMTRFMLNQSKY-------------TLDSVLSKL--SCPLLLLWGDLDPWVGSAKATRIKEFYPN 264 (304)
Q Consensus 202 -~~~-~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~l~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 264 (304)
+.. ..+...-+.......-+....+ ...=.++++ ++|+++++|++|.+++++.++.+.+.+|+
T Consensus 274 ~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~ 353 (395)
T PLN02872 274 EPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPS 353 (395)
T ss_pred CCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCC
Confidence 000 0000001111111000000000 001124566 57999999999999999999999988887
Q ss_pred -ceEEEe-CCCCC---CCccChHHHHHHHHHHHhccCCCC
Q 021980 265 -TTLVNF-QAGHC---PHDEVPELVNKALMDWLSTVKPQA 299 (304)
Q Consensus 265 -~~~~~~-~~GH~---~~~e~p~~~~~~i~~fl~~~~~~~ 299 (304)
.+++.+ ++||. ...|.|+++.+.|.+||++.....
T Consensus 354 ~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~~~ 393 (395)
T PLN02872 354 KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGKSS 393 (395)
T ss_pred ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhhcc
Confidence 567667 58995 456999999999999998655443
No 58
>PRK13604 luxD acyl transferase; Provisional
Probab=99.86 E-value=6.4e-20 Score=150.62 Aligned_cols=229 Identities=16% Similarity=0.202 Sum_probs=132.8
Q ss_pred EEEEcCeeEEEEecCC-------CCcEEEEcccCCChhhHHhchHHHhc-cCcEEEecCCCC-CCCCcchhhhchhhHHH
Q 021980 13 FWTWRGHKIHYVVQGE-------GSPVVLIHGFGASAFHWRYNIPELAK-RYKVYAVDLLGF-GWSEKAIIEYDAMVWKD 83 (304)
Q Consensus 13 ~~~~~g~~~~y~~~g~-------g~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~-G~S~~~~~~~~~~~~~~ 83 (304)
..+-+|.+++-...-+ .++||+.||++.....+..++..|.+ +|.|+.+|.+|| |.|+.....++......
T Consensus 14 ~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~ 93 (307)
T PRK13604 14 ICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKN 93 (307)
T ss_pred EEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccccHH
Confidence 3455677777443322 25788999999987778888888864 799999999998 89976543333222334
Q ss_pred HH---HHHHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHH
Q 021980 84 QI---VDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQ 160 (304)
Q Consensus 84 ~l---~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (304)
|+ .+++.....+++.|+||||||.+|+..|... .++.+|+.+|.... ...+.
T Consensus 94 Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l-----------------------~d~l~ 148 (307)
T PRK13604 94 SLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNL-----------------------RDTLE 148 (307)
T ss_pred HHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccH-----------------------HHHHH
Confidence 55 4555555567899999999999997777643 38888887764310 00011
Q ss_pred HHHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceE
Q 021980 161 RIVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLL 240 (304)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 240 (304)
+.. ... .. ..| .. .....+ + + .........+.+.....-.. ......+..+++++|+|
T Consensus 149 ~~~-~~~-~~-~~p----------~~---~lp~~~-d-~---~g~~l~~~~f~~~~~~~~~~-~~~s~i~~~~~l~~PvL 206 (307)
T PRK13604 149 RAL-GYD-YL-SLP----------ID---ELPEDL-D-F---EGHNLGSEVFVTDCFKHGWD-TLDSTINKMKGLDIPFI 206 (307)
T ss_pred Hhh-hcc-cc-cCc----------cc---cccccc-c-c---ccccccHHHHHHHHHhcCcc-ccccHHHHHhhcCCCEE
Confidence 000 000 00 000 00 000000 0 0 00000001111111000000 00112345677899999
Q ss_pred EEecCCCCCCCcHHHHHHHHhCC--CceEEEe-CCCCCCCccChHHHHHHHHHHHh
Q 021980 241 LLWGDLDPWVGSAKATRIKEFYP--NTTLVNF-QAGHCPHDEVPELVNKALMDWLS 293 (304)
Q Consensus 241 ii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~ 293 (304)
+|||++|.++|.+.++.+.+.++ +++++++ +++|... |++- ++++|.+
T Consensus 207 iIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~-~~~~----~~~~~~~ 257 (307)
T PRK13604 207 AFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG-ENLV----VLRNFYQ 257 (307)
T ss_pred EEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccC-cchH----HHHHHHH
Confidence 99999999999999999888775 5788888 5889755 4432 3445553
No 59
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.86 E-value=5.3e-20 Score=177.61 Aligned_cols=262 Identities=17% Similarity=0.259 Sum_probs=145.1
Q ss_pred CCCcEEEEcccCCChhhHHhc-----hHHHhc-cCcEEEecCCCCCCCCcchh--hhchhhHHHHHHHHHHH---hcCCC
Q 021980 28 EGSPVVLIHGFGASAFHWRYN-----IPELAK-RYKVYAVDLLGFGWSEKAII--EYDAMVWKDQIVDFLKE---IVKEP 96 (304)
Q Consensus 28 ~g~~iv~lHG~~~~~~~~~~~-----~~~l~~-~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~l~~~~~~---~~~~~ 96 (304)
.++||||+||++.+...|+.+ ++.|.+ +|+|+++| +|.|+.+.. ..+..+++..+.+.++. +..++
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d---~G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~ 142 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVID---FGSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRD 142 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEc---CCCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCc
Confidence 468999999999999999876 677854 69999999 577765432 23444444444444443 33478
Q ss_pred eEEEEechhHHHHHHHHhcC-CcceeEEEEecCCCCCCCCCCCCCc-----hhhhHHHHHHhh--HHHHHHHHHHhhhhh
Q 021980 97 AVLVGNSLGGFAALVAAVGL-PDQVTGVALLNSAGQFGDGRKGSNQ-----SEESTLQKVFLK--PLKEIFQRIVLGFLF 168 (304)
Q Consensus 97 ~~lvGhS~Gg~va~~~a~~~-p~~v~~lvli~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 168 (304)
++|+||||||++++.+++.+ |++|+++|+++++..+......... ....+....+.. .++...... .+
T Consensus 143 v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~----~~ 218 (994)
T PRK07868 143 VHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMART----GF 218 (994)
T ss_pred eEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHH----HH
Confidence 99999999999999998754 5689999998876433221100000 000000000000 000000000 00
Q ss_pred hhhcchhH----HHHHhHhhhcCCCCCChHHHHhhhCCC-CCCchHHHHHHHHHHHHhhc----cccchh---hhhccCC
Q 021980 169 WQAKQPAR----IVSVLKSVYINSSNVDDYLVESITRPA-ADPNAAEVYYRLMTRFMLNQ----SKYTLD---SVLSKLS 236 (304)
Q Consensus 169 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~---~~l~~i~ 236 (304)
....|.. .....+.+.......++.....+.... ........+......+...+ ..+... ..+++|+
T Consensus 219 -~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~ 297 (994)
T PRK07868 219 -QMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADIT 297 (994)
T ss_pred -HhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCC
Confidence 0000100 111111111111111100000100000 00000112222222222111 111221 2478999
Q ss_pred CceEEEecCCCCCCCcHHHHHHHHhCCCceE-EEe-CCCCCCCc---cChHHHHHHHHHHHhccCC
Q 021980 237 CPLLLLWGDLDPWVGSAKATRIKEFYPNTTL-VNF-QAGHCPHD---EVPELVNKALMDWLSTVKP 297 (304)
Q Consensus 237 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~-~~~-~~GH~~~~---e~p~~~~~~i~~fl~~~~~ 297 (304)
+|+|+|+|++|.+++++.++.+.+.+|++++ .++ ++||+.++ ..|+++-..|.+||.+.+.
T Consensus 298 ~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 298 CPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred CCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhcc
Confidence 9999999999999999999999999999987 444 79998775 5778888999999987554
No 60
>PRK10566 esterase; Provisional
Probab=99.85 E-value=1.6e-19 Score=148.41 Aligned_cols=207 Identities=20% Similarity=0.228 Sum_probs=122.1
Q ss_pred EEEEecC----CCCcEEEEcccCCChhhHHhchHHHhc-cCcEEEecCCCCCCCCcchhhhch-------hhHHHHHHHH
Q 021980 21 IHYVVQG----EGSPVVLIHGFGASAFHWRYNIPELAK-RYKVYAVDLLGFGWSEKAIIEYDA-------MVWKDQIVDF 88 (304)
Q Consensus 21 ~~y~~~g----~g~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~-------~~~~~~l~~~ 88 (304)
++|...+ +.|+||++||++++...|..+...|++ +|+|+++|+||||.|......... ..-.+++.++
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTL 94 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHH
Confidence 5555543 246899999999998889988888865 699999999999976322111111 0112333333
Q ss_pred HHH------hcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHH
Q 021980 89 LKE------IVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRI 162 (304)
Q Consensus 89 ~~~------~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (304)
++. ++.++++++||||||.+++.++.++|+....++++++.. +. .... ..
T Consensus 95 ~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~----------------~~-----~~~~---~~ 150 (249)
T PRK10566 95 RAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGY----------------FT-----SLAR---TL 150 (249)
T ss_pred HHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHH----------------HH-----HHHH---Hh
Confidence 332 234689999999999999999999887554444433210 00 0000 00
Q ss_pred HhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccC-CCceEE
Q 021980 163 VLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKL-SCPLLL 241 (304)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~P~li 241 (304)
.+... ... . ........+.... ..++....+.++ ++|+|+
T Consensus 151 ----------~~~~~--------~~~-~-------------~~~~~~~~~~~~~-------~~~~~~~~~~~i~~~P~Li 191 (249)
T PRK10566 151 ----------FPPLI--------PET-A-------------AQQAEFNNIVAPL-------AEWEVTHQLEQLADRPLLL 191 (249)
T ss_pred ----------ccccc--------ccc-c-------------ccHHHHHHHHHHH-------hhcChhhhhhhcCCCCEEE
Confidence 00000 000 0 0000000000000 012222334565 799999
Q ss_pred EecCCCCCCCcHHHHHHHHhCCC------ceEEEe-CCCCCCCccChHHHHHHHHHHHhc
Q 021980 242 LWGDLDPWVGSAKATRIKEFYPN------TTLVNF-QAGHCPHDEVPELVNKALMDWLST 294 (304)
Q Consensus 242 i~G~~D~~~~~~~~~~~~~~~~~------~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~~ 294 (304)
|+|++|.+++.+.++.+.+.++. .++..+ ++||... |+ ..+.+.+||++
T Consensus 192 i~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~~-~~~~~~~fl~~ 247 (249)
T PRK10566 192 WHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---PE-ALDAGVAFFRQ 247 (249)
T ss_pred EEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---HH-HHHHHHHHHHh
Confidence 99999999999998888876643 344555 5799853 44 45788889875
No 61
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.84 E-value=7.6e-19 Score=136.93 Aligned_cols=223 Identities=20% Similarity=0.218 Sum_probs=145.7
Q ss_pred CCCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHH-HhcCCCeEEEEechhH
Q 021980 28 EGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLK-EIVKEPAVLVGNSLGG 106 (304)
Q Consensus 28 ~g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~lvGhS~Gg 106 (304)
....++++|--|+++..|+.+...|...+.++++++||+|.--....-.++..+++.+...+. -...+++.++||||||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa 85 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHSMGA 85 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccchhH
Confidence 345689999999999999999888988899999999999976544445677788888877776 3455689999999999
Q ss_pred HHHHHHHhcCCc---ceeEEEEecCCCCCCCCCCCC-CchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhH
Q 021980 107 FAALVAAVGLPD---QVTGVALLNSAGQFGDGRKGS-NQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLK 182 (304)
Q Consensus 107 ~va~~~a~~~p~---~v~~lvli~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (304)
++|+++|.+... ....+.+.+..++.....+.. ...+.++++.. .. .. ..|..+.
T Consensus 86 ~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l-----~~-----------lg-G~p~e~l---- 144 (244)
T COG3208 86 MLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADL-----VD-----------LG-GTPPELL---- 144 (244)
T ss_pred HHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHH-----HH-----------hC-CCChHHh----
Confidence 999999985321 255666665443311111111 11111111110 00 00 0010000
Q ss_pred hhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhC
Q 021980 183 SVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFY 262 (304)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~ 262 (304)
.+.++ ...+.-.++....-...|..... ..++||+.++.|++|..++.+....|.+..
T Consensus 145 --------ed~El-------------~~l~LPilRAD~~~~e~Y~~~~~-~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t 202 (244)
T COG3208 145 --------EDPEL-------------MALFLPILRADFRALESYRYPPP-APLACPIHAFGGEKDHEVSRDELGAWREHT 202 (244)
T ss_pred --------cCHHH-------------HHHHHHHHHHHHHHhcccccCCC-CCcCcceEEeccCcchhccHHHHHHHHHhh
Confidence 00011 11111111111111112222221 568999999999999999999999999998
Q ss_pred C-CceEEEeCCCCCCCccChHHHHHHHHHHHh
Q 021980 263 P-NTTLVNFQAGHCPHDEVPELVNKALMDWLS 293 (304)
Q Consensus 263 ~-~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~ 293 (304)
. ..++.++++||+...++.+++.+.|.+.+.
T Consensus 203 ~~~f~l~~fdGgHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 203 KGDFTLRVFDGGHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred cCCceEEEecCcceehhhhHHHHHHHHHHHhh
Confidence 8 468888999999999999999999999885
No 62
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.83 E-value=2.4e-19 Score=140.99 Aligned_cols=116 Identities=26% Similarity=0.406 Sum_probs=91.2
Q ss_pred cEEEEcCee--EEEEecC----CCCcEEEEcccCCChhhHHhchHHHhc--cCcEEEecCCCCCCCCcc-hhhhchhhHH
Q 021980 12 NFWTWRGHK--IHYVVQG----EGSPVVLIHGFGASAFHWRYNIPELAK--RYKVYAVDLLGFGWSEKA-IIEYDAMVWK 82 (304)
Q Consensus 12 ~~~~~~g~~--~~y~~~g----~g~~iv~lHG~~~~~~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~-~~~~~~~~~~ 82 (304)
.-++++|.. +.....+ .||.++++||.|.|..+|..+...+.. +++|+|+|+||||.|.-. ..+.+.+.++
T Consensus 51 edv~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~ 130 (343)
T KOG2564|consen 51 EDVSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMS 130 (343)
T ss_pred cccccCCCcceEEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHH
Confidence 345666655 3322233 377788899999999999999988865 488999999999998643 3467888899
Q ss_pred HHHHHHHHHhc---CCCeEEEEechhHHHHHHHHhc--CCcceeEEEEecC
Q 021980 83 DQIVDFLKEIV---KEPAVLVGNSLGGFAALVAAVG--LPDQVTGVALLNS 128 (304)
Q Consensus 83 ~~l~~~~~~~~---~~~~~lvGhS~Gg~va~~~a~~--~p~~v~~lvli~~ 128 (304)
.|+.++++.+- ..+++||||||||.||...|.. .|. +.++++|+-
T Consensus 131 KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDV 180 (343)
T KOG2564|consen 131 KDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDV 180 (343)
T ss_pred HHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEE
Confidence 99999988874 3479999999999999888864 576 889999874
No 63
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.81 E-value=1.5e-18 Score=136.10 Aligned_cols=191 Identities=21% Similarity=0.289 Sum_probs=134.0
Q ss_pred CCcEEEEcccCCChhhHHhchHHHhc--cCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhc--CCCeEEEEech
Q 021980 29 GSPVVLIHGFGASAFHWRYNIPELAK--RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIV--KEPAVLVGNSL 104 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~lvGhS~ 104 (304)
.+++++.||...+......+...|+. +++++.+|+.|+|.|...+.+.....-++.+-+.+.+-. .++++|+|+|+
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g~~~~Iil~G~Si 139 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYGSPERIILYGQSI 139 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcCCCceEEEEEecC
Confidence 47899999997766655555555655 689999999999999876655555444455556665543 57899999999
Q ss_pred hHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhHhh
Q 021980 105 GGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLKSV 184 (304)
Q Consensus 105 Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (304)
|+..+..+|.+.| ++++|+.+|..- . +.. +
T Consensus 140 Gt~~tv~Lasr~~--~~alVL~SPf~S---~-------------------~rv--------------------------~ 169 (258)
T KOG1552|consen 140 GTVPTVDLASRYP--LAAVVLHSPFTS---G-------------------MRV--------------------------A 169 (258)
T ss_pred CchhhhhHhhcCC--cceEEEeccchh---h-------------------hhh--------------------------h
Confidence 9999999999999 999999876320 0 000 0
Q ss_pred hcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCCC
Q 021980 185 YINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYPN 264 (304)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 264 (304)
+... ... +..+ .+...+.++.|+||+|||||++|.+++..++..+.+..++
T Consensus 170 ~~~~-~~~-~~~d---------------------------~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~ 220 (258)
T KOG1552|consen 170 FPDT-KTT-YCFD---------------------------AFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKE 220 (258)
T ss_pred ccCc-ceE-Eeec---------------------------cccccCcceeccCCEEEEecccCceecccccHHHHHhccc
Confidence 0000 000 0000 0111344578999999999999999999999999999888
Q ss_pred c-eEEEe-CCCCCCCccChHHHHHHHHHHHhccCCCC
Q 021980 265 T-TLVNF-QAGHCPHDEVPELVNKALMDWLSTVKPQA 299 (304)
Q Consensus 265 ~-~~~~~-~~GH~~~~e~p~~~~~~i~~fl~~~~~~~ 299 (304)
. +-.++ ++||+- .|.+.++-+.+..|+.....++
T Consensus 221 ~~epl~v~g~gH~~-~~~~~~yi~~l~~f~~~~~~~~ 256 (258)
T KOG1552|consen 221 KVEPLWVKGAGHND-IELYPEYIEHLRRFISSVLPSQ 256 (258)
T ss_pred cCCCcEEecCCCcc-cccCHHHHHHHHHHHHHhcccC
Confidence 5 44444 789974 4566677788999987665543
No 64
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.77 E-value=1.6e-17 Score=134.84 Aligned_cols=249 Identities=20% Similarity=0.270 Sum_probs=136.3
Q ss_pred CCcEEEEcccCCChh-hH-HhchHHHh-ccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHh----cCCCeEEEE
Q 021980 29 GSPVVLIHGFGASAF-HW-RYNIPELA-KRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI----VKEPAVLVG 101 (304)
Q Consensus 29 g~~iv~lHG~~~~~~-~~-~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~lvG 101 (304)
.|.+|++||+.+++. .| +.+...+. ++|.+|+++.||||++...........+.+|+..+++.+ ...++..+|
T Consensus 75 ~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG 154 (345)
T COG0429 75 KPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVG 154 (345)
T ss_pred CceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEE
Confidence 467889999855543 34 44555664 569999999999999875322222223346666665544 346899999
Q ss_pred echhH-HHHHHHHhcCCc-ceeEEEEecCCCCCCCCCCCCCchhh-hHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHH
Q 021980 102 NSLGG-FAALVAAVGLPD-QVTGVALLNSAGQFGDGRKGSNQSEE-STLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIV 178 (304)
Q Consensus 102 hS~Gg-~va~~~a~~~p~-~v~~lvli~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (304)
.|+|| +++..++..--+ .+.+.+.++.+..+............ ..+.+.+.+.+.....+....+ ....+....
T Consensus 155 ~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l---~~~~p~~~~ 231 (345)
T COG0429 155 FSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKEL---EPSLPGTVL 231 (345)
T ss_pred ecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhc---CcccCcHHH
Confidence 99999 777776654322 23444444432211110000000000 1122221111111111111000 011111111
Q ss_pred HHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHHHHH
Q 021980 179 SVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRI 258 (304)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~ 258 (304)
..++.+ ..-..+.+.++.+.......+.||+.. +....+++|.+|+|||++.+|++++++...+.
T Consensus 232 ~~ik~~-----~ti~eFD~~~Tap~~Gf~da~dYYr~a----------Ss~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~ 296 (345)
T COG0429 232 AAIKRC-----RTIREFDDLLTAPLHGFADAEDYYRQA----------SSLPLLPKIRKPTLIINAKDDPFMPPEVIPKL 296 (345)
T ss_pred HHHHhh-----chHHhccceeeecccCCCcHHHHHHhc----------cccccccccccceEEEecCCCCCCChhhCCcc
Confidence 111110 001122333444555555556666643 22355789999999999999999999887776
Q ss_pred HH-hCCCceEEEe-CCCCCCCcc----ChH-HHHHHHHHHHhcc
Q 021980 259 KE-FYPNTTLVNF-QAGHCPHDE----VPE-LVNKALMDWLSTV 295 (304)
Q Consensus 259 ~~-~~~~~~~~~~-~~GH~~~~e----~p~-~~~~~i~~fl~~~ 295 (304)
.. ..|+..+... -+||.-.+. +|. -..+.+.+|++..
T Consensus 297 ~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 297 QEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred hhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 66 7888888777 599987765 444 4456677777643
No 65
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.77 E-value=9.8e-18 Score=126.04 Aligned_cols=140 Identities=31% Similarity=0.427 Sum_probs=105.7
Q ss_pred cEEEEcccCCChhhHHhchHHHhc-cCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHH-H-HhcCCCeEEEEechhHH
Q 021980 31 PVVLIHGFGASAFHWRYNIPELAK-RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFL-K-EIVKEPAVLVGNSLGGF 107 (304)
Q Consensus 31 ~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~lvGhS~Gg~ 107 (304)
+||++||++.+...|......|.+ +|.|+.+|+||+|.+.... . .+++.+.+ . ..+.++++++|||+||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGAD---A----VERVLADIRAGYPDPDRIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHSH---H----HHHHHHHHHHHHCTCCEEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchhH---H----HHHHHHHHHhhcCCCCcEEEEEEccCcH
Confidence 589999999999999999998865 5999999999999984322 1 12333332 1 12567899999999999
Q ss_pred HHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhHhhhcC
Q 021980 108 AALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLKSVYIN 187 (304)
Q Consensus 108 va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (304)
+++.++... .+++++|++++...
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~~~~~-------------------------------------------------------- 96 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLSPYPD-------------------------------------------------------- 96 (145)
T ss_dssp HHHHHHHHS-TTESEEEEESESSG--------------------------------------------------------
T ss_pred HHHHHhhhc-cceeEEEEecCccc--------------------------------------------------------
Confidence 999999988 78999999865100
Q ss_pred CCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCC-Cce
Q 021980 188 SSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYP-NTT 266 (304)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~ 266 (304)
.+.+...++|+++++|++|..++.+..+++.+.++ ..+
T Consensus 97 -----------------------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~ 135 (145)
T PF12695_consen 97 -----------------------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKE 135 (145)
T ss_dssp -----------------------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEE
T ss_pred -----------------------------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcE
Confidence 00123455699999999999999998888877766 467
Q ss_pred EEEe-CCCCC
Q 021980 267 LVNF-QAGHC 275 (304)
Q Consensus 267 ~~~~-~~GH~ 275 (304)
++++ +++|+
T Consensus 136 ~~~i~g~~H~ 145 (145)
T PF12695_consen 136 LYIIPGAGHF 145 (145)
T ss_dssp EEEETTS-TT
T ss_pred EEEeCCCcCc
Confidence 8888 57895
No 66
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.76 E-value=8.5e-18 Score=137.33 Aligned_cols=101 Identities=25% Similarity=0.294 Sum_probs=80.7
Q ss_pred CCcEEEEcccCCC----hhhHHhchHHHh-ccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHH---HHHhcCCCeEEE
Q 021980 29 GSPVVLIHGFGAS----AFHWRYNIPELA-KRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDF---LKEIVKEPAVLV 100 (304)
Q Consensus 29 g~~iv~lHG~~~~----~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~lv 100 (304)
.++|||+||++.. ...|..+++.|+ .+|+|+++|+||||.|+......+...+.+++... +++.+.++++|+
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~~~~~v~Lv 104 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQGHPPVTLW 104 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3578899999864 345777788886 46999999999999997654344555666766554 444456799999
Q ss_pred EechhHHHHHHHHhcCCcceeEEEEecCC
Q 021980 101 GNSLGGFAALVAAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 101 GhS~Gg~va~~~a~~~p~~v~~lvli~~~ 129 (304)
||||||.+++.+|.++|++++++|+++|.
T Consensus 105 G~SmGG~vAl~~A~~~p~~v~~lVL~~P~ 133 (266)
T TIGR03101 105 GLRLGALLALDAANPLAAKCNRLVLWQPV 133 (266)
T ss_pred EECHHHHHHHHHHHhCccccceEEEeccc
Confidence 99999999999999999999999999864
No 67
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.76 E-value=2.1e-16 Score=130.45 Aligned_cols=268 Identities=17% Similarity=0.216 Sum_probs=155.3
Q ss_pred EEcCeeEEEEecCC-----CCcEEEEcccCCChh-----------hHHhchH---HH-hccCcEEEecCCCCC-CCCcch
Q 021980 15 TWRGHKIHYVVQGE-----GSPVVLIHGFGASAF-----------HWRYNIP---EL-AKRYKVYAVDLLGFG-WSEKAI 73 (304)
Q Consensus 15 ~~~g~~~~y~~~g~-----g~~iv~lHG~~~~~~-----------~~~~~~~---~l-~~~~~vi~~D~~G~G-~S~~~~ 73 (304)
.+++.++.|+++|. ...||++|++.+++. +|+.++. .+ .++|-||+.|-.|.+ .|+.+.
T Consensus 32 ~l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~ 111 (368)
T COG2021 32 VLSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPS 111 (368)
T ss_pred cccCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCC
Confidence 45667888999984 236888899988543 4555442 13 245999999999987 443321
Q ss_pred -------------hhhchhhHHHHHHHHHHHhcCCCe-EEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCC
Q 021980 74 -------------IEYDAMVWKDQIVDFLKEIVKEPA-VLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGS 139 (304)
Q Consensus 74 -------------~~~~~~~~~~~l~~~~~~~~~~~~-~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~ 139 (304)
...+..++++.-..++++++++++ .+||-|||||.|++++..|||+|.+++.++++.......
T Consensus 112 s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~--- 188 (368)
T COG2021 112 SINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQN--- 188 (368)
T ss_pred CcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHH---
Confidence 123444555444567799999997 599999999999999999999999999998754322110
Q ss_pred CchhhhHHHHHHhhHH---HHH----------------HHHHHhhhhhhhhcchhHHHHHhHhhhcCCC--------CCC
Q 021980 140 NQSEESTLQKVFLKPL---KEI----------------FQRIVLGFLFWQAKQPARIVSVLKSVYINSS--------NVD 192 (304)
Q Consensus 140 ~~~~~~~~~~~~~~~~---~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 192 (304)
-.+....+... +.+ ..+.. .....+.+..+...+.+...... .+.
T Consensus 189 -----ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l---~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vE 260 (368)
T COG2021 189 -----IAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARML---AHLTYRSEEELDERFGRRLQADPLRGGGVRFAVE 260 (368)
T ss_pred -----HHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHH---HHHHccCHHHHHHHhcccccccccCCCchhHHHH
Confidence 00000000000 000 00000 00001111111111111000000 011
Q ss_pred hHHHHhhhCCCCCCchHHHHHHHHHH-HHhh--ccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCCCce-EE
Q 021980 193 DYLVESITRPAADPNAAEVYYRLMTR-FMLN--QSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTT-LV 268 (304)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~-~~ 268 (304)
.|+...-.+.....++ +.|..+... ...+ ....++.+.++.|++|++++.=+.|...|++....+.+.++.+. +.
T Consensus 261 SYL~~qg~kf~~rfDa-NsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~ 339 (368)
T COG2021 261 SYLDYQGDKFVARFDA-NSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALR 339 (368)
T ss_pred HHHHHHHHHHHhccCc-chHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceE
Confidence 1111110000011111 111111111 1111 11234556689999999999999999999999999999999887 77
Q ss_pred EeC--CCCCCCccChHHHHHHHHHHHhc
Q 021980 269 NFQ--AGHCPHDEVPELVNKALMDWLST 294 (304)
Q Consensus 269 ~~~--~GH~~~~e~p~~~~~~i~~fl~~ 294 (304)
+++ .||-.++...+.+...|..||+.
T Consensus 340 ~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 340 EIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred EecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 774 69999998899999999999975
No 68
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.73 E-value=2.4e-15 Score=119.78 Aligned_cols=107 Identities=26% Similarity=0.403 Sum_probs=89.4
Q ss_pred EEecCC-C---CcEEEEcccCCChhhHHhchHHHhc-cCcEEEecCCCCCCCCcch-hhhchhhHHHHHHHHHHHhcCC-
Q 021980 23 YVVQGE-G---SPVVLIHGFGASAFHWRYNIPELAK-RYKVYAVDLLGFGWSEKAI-IEYDAMVWKDQIVDFLKEIVKE- 95 (304)
Q Consensus 23 y~~~g~-g---~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~~~~~~~~- 95 (304)
|.+..+ | .+||=+||.++|+.+++++.+.|.+ +.|+|.+.+||+|.++.+. ..++...-+..+.++++.++++
T Consensus 25 y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~ 104 (297)
T PF06342_consen 25 YEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKG 104 (297)
T ss_pred EEecCCCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCC
Confidence 666543 3 2688899999999999999999965 6999999999999997653 4566666667788889999875
Q ss_pred CeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCC
Q 021980 96 PAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 131 (304)
Q Consensus 96 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~ 131 (304)
+++.+|||.|+-.|+.+|..+| ..++++++|++.
T Consensus 105 ~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 105 KLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred ceEEEEeccchHHHHHHHhcCc--cceEEEecCCcc
Confidence 6899999999999999999996 679999999774
No 69
>PRK11460 putative hydrolase; Provisional
Probab=99.70 E-value=8.1e-16 Score=124.52 Aligned_cols=168 Identities=18% Similarity=0.157 Sum_probs=107.0
Q ss_pred CCcEEEEcccCCChhhHHhchHHHhcc-CcEEEecCCCCCCCCcc-----------hhhh---chhhHHHHHHHHHH---
Q 021980 29 GSPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKA-----------IIEY---DAMVWKDQIVDFLK--- 90 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~-----------~~~~---~~~~~~~~l~~~~~--- 90 (304)
.+.||||||+|++...|..+.+.|.+. ..+..++.+|...+... .... +.....+.+.++++
T Consensus 16 ~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 95 (232)
T PRK11460 16 QQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYWQ 95 (232)
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHHH
Confidence 567999999999999999999999754 34455555554322100 0000 11111122333332
Q ss_pred -HhcC--CCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhh
Q 021980 91 -EIVK--EPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFL 167 (304)
Q Consensus 91 -~~~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (304)
..++ ++++|+|||+||.+++.++..+|+.+.+++.+++...
T Consensus 96 ~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~------------------------------------ 139 (232)
T PRK11460 96 QQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA------------------------------------ 139 (232)
T ss_pred HhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc------------------------------------
Confidence 2232 5799999999999999999999988887776532100
Q ss_pred hhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCC
Q 021980 168 FWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLD 247 (304)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 247 (304)
. .+ . ....++|++++||++|
T Consensus 140 -------------------~-------------~~-~---------------------------~~~~~~pvli~hG~~D 159 (232)
T PRK11460 140 -------------------S-------------LP-E---------------------------TAPTATTIHLIHGGED 159 (232)
T ss_pred -------------------c-------------cc-c---------------------------cccCCCcEEEEecCCC
Confidence 0 00 0 0113579999999999
Q ss_pred CCCCcHHHHHHHHhCC----CceEEEe-CCCCCCCccChHHHHHHHHHHH
Q 021980 248 PWVGSAKATRIKEFYP----NTTLVNF-QAGHCPHDEVPELVNKALMDWL 292 (304)
Q Consensus 248 ~~~~~~~~~~~~~~~~----~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl 292 (304)
+++|.+.++++.+.+. +.+++++ ++||.+..+.-+...+.+.++|
T Consensus 160 ~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 160 PVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred CccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 9999988877776553 3466666 5899986555555555555554
No 70
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.69 E-value=2.5e-16 Score=136.16 Aligned_cols=105 Identities=21% Similarity=0.248 Sum_probs=81.2
Q ss_pred CCCcEEEEcccCCCh--hhHHh-chHHHh---ccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHh------cCC
Q 021980 28 EGSPVVLIHGFGASA--FHWRY-NIPELA---KRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI------VKE 95 (304)
Q Consensus 28 ~g~~iv~lHG~~~~~--~~~~~-~~~~l~---~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~------~~~ 95 (304)
++|++|++|||+.+. ..|.. +.+.|. .+++||++|++|+|.|..+.........++++.++++.+ ..+
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~ 119 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWD 119 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 468999999998754 35764 455543 369999999999998875432223345566677776654 367
Q ss_pred CeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCC
Q 021980 96 PAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQF 132 (304)
Q Consensus 96 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~ 132 (304)
+++||||||||.+|..++..+|++|.++++++|+++.
T Consensus 120 ~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 120 NVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred cEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 9999999999999999999999999999999997653
No 71
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.68 E-value=1.3e-14 Score=122.20 Aligned_cols=259 Identities=21% Similarity=0.246 Sum_probs=139.6
Q ss_pred EEcCeeEEEEec-----------CCCCcEEEEcccCCCh-hhH-HhchHHH-hccCcEEEecCCCCCCCCcchhhhchhh
Q 021980 15 TWRGHKIHYVVQ-----------GEGSPVVLIHGFGASA-FHW-RYNIPEL-AKRYKVYAVDLLGFGWSEKAIIEYDAMV 80 (304)
Q Consensus 15 ~~~g~~~~y~~~-----------g~g~~iv~lHG~~~~~-~~~-~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 80 (304)
+-||..+.+... +..|.+|++||+.+++ ..+ +.++..+ .++|+|+++..||+|+|+-.........
T Consensus 100 ~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag 179 (409)
T KOG1838|consen 100 TSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAG 179 (409)
T ss_pred eCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecC
Confidence 467777766432 2336788999985544 444 4444444 4579999999999999864322222233
Q ss_pred HHHHHHHHHHHhc----CCCeEEEEechhHHHHHHHHhcCC---cceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhh
Q 021980 81 WKDQIVDFLKEIV----KEPAVLVGNSLGGFAALVAAVGLP---DQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLK 153 (304)
Q Consensus 81 ~~~~l~~~~~~~~----~~~~~lvGhS~Gg~va~~~a~~~p---~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (304)
+.+|+.+.++.+. ..+...+|.||||++...|...-. ..+.++.+.+|.-.+. ..... .....+.++.+
T Consensus 180 ~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~-~~~~~---~~~~~~~~y~~ 255 (409)
T KOG1838|consen 180 WTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLA-ASRSI---ETPLYRRFYNR 255 (409)
T ss_pred CHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhh-hhhHH---hcccchHHHHH
Confidence 4567776666553 357999999999999999987643 3455666555432110 00000 00001111111
Q ss_pred HHHHHHHHHHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhc
Q 021980 154 PLKEIFQRIVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLS 233 (304)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 233 (304)
.+..-..+...... ..............+..--..+.+.++.+....+..+.||+.. +....+.
T Consensus 256 ~l~~~l~~~~~~~r------~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~a----------Ss~~~v~ 319 (409)
T KOG1838|consen 256 ALTLNLKRIVLRHR------HTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKA----------SSSNYVD 319 (409)
T ss_pred HHHHhHHHHHhhhh------hhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhc----------chhhhcc
Confidence 11111111100000 0000000000001111112334444555555444455555432 2345578
Q ss_pred cCCCceEEEecCCCCCCCcHHH-HHHHHhCCCceEEEe-CCCCCCCccC----hHHHHHH-HHHHHh
Q 021980 234 KLSCPLLLLWGDLDPWVGSAKA-TRIKEFYPNTTLVNF-QAGHCPHDEV----PELVNKA-LMDWLS 293 (304)
Q Consensus 234 ~i~~P~lii~G~~D~~~~~~~~-~~~~~~~~~~~~~~~-~~GH~~~~e~----p~~~~~~-i~~fl~ 293 (304)
+|.+|+|+|.+.+|+++|.+.. ....+.+|+.-+++- .+||.-.+|. +..-.+. +.+|+.
T Consensus 320 ~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~ 386 (409)
T KOG1838|consen 320 KIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLG 386 (409)
T ss_pred cccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHH
Confidence 9999999999999999998644 445666787766666 5999888776 2222333 566664
No 72
>PLN00021 chlorophyllase
Probab=99.68 E-value=4.4e-15 Score=124.71 Aligned_cols=103 Identities=18% Similarity=0.185 Sum_probs=73.5
Q ss_pred CCCCcEEEEcccCCChhhHHhchHHHhc-cCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHH-------hcCCCeE
Q 021980 27 GEGSPVVLIHGFGASAFHWRYNIPELAK-RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKE-------IVKEPAV 98 (304)
Q Consensus 27 g~g~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~ 98 (304)
|+.|+|||+||++.+...|..+++.|++ +|.|+++|++|++.+.....-.+.....+.+.+.++. .+.++++
T Consensus 50 g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~ 129 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLA 129 (313)
T ss_pred CCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccccChhheE
Confidence 4568899999999999999999999976 5999999999986543211111111122222222222 2346799
Q ss_pred EEEechhHHHHHHHHhcCCc-----ceeEEEEecCC
Q 021980 99 LVGNSLGGFAALVAAVGLPD-----QVTGVALLNSA 129 (304)
Q Consensus 99 lvGhS~Gg~va~~~a~~~p~-----~v~~lvli~~~ 129 (304)
|+||||||.+|+.+|..+++ ++++++.+++.
T Consensus 130 l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 130 LAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred EEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 99999999999999999875 57888888764
No 73
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.65 E-value=8e-15 Score=118.94 Aligned_cols=99 Identities=25% Similarity=0.317 Sum_probs=81.3
Q ss_pred CcEEEEcccCCChhhHHhchHHHhcc-CcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCC-CeEEEEechhHH
Q 021980 30 SPVVLIHGFGASAFHWRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKE-PAVLVGNSLGGF 107 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~lvGhS~Gg~ 107 (304)
+||+|+|+.+++...|..+++.+.+. +.|+.++.+|.+..... ..+.+.+++...+.|.....+ +++|+|||+||.
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~--~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~ 78 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEPP--PDSIEELASRYAEAIRARQPEGPYVLAGWSFGGI 78 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSHE--ESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCCC--CCCHHHHHHHHHHHhhhhCCCCCeeehccCccHH
Confidence 47999999999999999999999997 99999999999843332 356667777777777776665 999999999999
Q ss_pred HHHHHHhcC---CcceeEEEEecCCC
Q 021980 108 AALVAAVGL---PDQVTGVALLNSAG 130 (304)
Q Consensus 108 va~~~a~~~---p~~v~~lvli~~~~ 130 (304)
+|+++|.+. -..+..|+++++..
T Consensus 79 lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 79 LAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred HHHHHHHHHHHhhhccCceEEecCCC
Confidence 999999753 34588999999643
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=99.65 E-value=2.3e-14 Score=119.60 Aligned_cols=114 Identities=17% Similarity=0.222 Sum_probs=74.9
Q ss_pred EcCeeEEEEec------C-CCCcEEEEcccCCChhhHHhch---HHHh-ccCcEEEecCCCCCC-----CCc--------
Q 021980 16 WRGHKIHYVVQ------G-EGSPVVLIHGFGASAFHWRYNI---PELA-KRYKVYAVDLLGFGW-----SEK-------- 71 (304)
Q Consensus 16 ~~g~~~~y~~~------g-~g~~iv~lHG~~~~~~~~~~~~---~~l~-~~~~vi~~D~~G~G~-----S~~-------- 71 (304)
.-|..+.|... + +-|+|+|+||++++...|.... ..++ .++.||.+|..++|. ++.
T Consensus 27 ~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~ 106 (283)
T PLN02442 27 TLGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAG 106 (283)
T ss_pred ccCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcc
Confidence 44556666543 2 2367888999999887775432 3333 369999999887761 110
Q ss_pred -----chh--------hhchhhHHHHHHHHHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCC
Q 021980 72 -----AII--------EYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 72 -----~~~--------~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~ 129 (304)
... .+-.....+.+.+....++.++++|+||||||..|+.++.++|+++++++.+++.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 107 FYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred eeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 000 0011112223333334456788999999999999999999999999999998764
No 75
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.63 E-value=6.1e-15 Score=112.11 Aligned_cols=215 Identities=20% Similarity=0.243 Sum_probs=139.0
Q ss_pred EEEEcCeeEEEEec---CCCCcEEEEcccCCChhhHHhchHHHh--ccCcEEEecCCCCCCCCcchhhhchhhHHHHHHH
Q 021980 13 FWTWRGHKIHYVVQ---GEGSPVVLIHGFGASAFHWRYNIPELA--KRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVD 87 (304)
Q Consensus 13 ~~~~~g~~~~y~~~---g~g~~iv~lHG~~~~~~~~~~~~~~l~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~ 87 (304)
..+-|.++++-... .+.|++|.+|+..++-...-..+..+- -+..|+.+++||+|+|+..+.+.....-++.+.+
T Consensus 59 l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~avld 138 (300)
T KOG4391|consen 59 LRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVLD 138 (300)
T ss_pred EEcCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccceeccHHHHHH
Confidence 44556666663322 246899999998887766555555553 3589999999999999876544333322344455
Q ss_pred HHHH---hcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHh
Q 021980 88 FLKE---IVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVL 164 (304)
Q Consensus 88 ~~~~---~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (304)
.+.. +...+++|.|-|+||.+|..+|++..+++.++++-++...+.... ..- ..++
T Consensus 139 yl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~----------i~~--v~p~--------- 197 (300)
T KOG4391|consen 139 YLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMA----------IPL--VFPF--------- 197 (300)
T ss_pred HHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhh----------hhe--eccc---------
Confidence 5432 234589999999999999999999999999999877632110000 000 0000
Q ss_pred hhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEec
Q 021980 165 GFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWG 244 (304)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 244 (304)
+.+. +. . ..++. .+...+.+.+-++|.|+|.|
T Consensus 198 ---------~~k~-----------------i~-~------------lc~kn---------~~~S~~ki~~~~~P~LFiSG 229 (300)
T KOG4391|consen 198 ---------PMKY-----------------IP-L------------LCYKN---------KWLSYRKIGQCRMPFLFISG 229 (300)
T ss_pred ---------hhhH-----------------HH-H------------HHHHh---------hhcchhhhccccCceEEeec
Confidence 0000 00 0 00000 01112223466789999999
Q ss_pred CCCCCCCcHHHHHHHHhCCC--ceEEEeC-CCCCCCccChHHHHHHHHHHHhccCC
Q 021980 245 DLDPWVGSAKATRIKEFYPN--TTLVNFQ-AGHCPHDEVPELVNKALMDWLSTVKP 297 (304)
Q Consensus 245 ~~D~~~~~~~~~~~~~~~~~--~~~~~~~-~GH~~~~e~p~~~~~~i~~fl~~~~~ 297 (304)
..|.++|+.....+-+..|. .++.+++ +.|+=-. .-|-..++|++||.+..-
T Consensus 230 lkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~-i~dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 230 LKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTW-ICDGYFQAIEDFLAEVVK 284 (300)
T ss_pred CccccCCcHHHHHHHHhCchhhhhheeCCCCccCceE-EeccHHHHHHHHHHHhcc
Confidence 99999999999999988876 4677774 6687443 357788999999987654
No 76
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.63 E-value=3.6e-14 Score=114.54 Aligned_cols=256 Identities=17% Similarity=0.214 Sum_probs=134.1
Q ss_pred EEEcCeeEEEEecCC----CCcEEEEcccCCChhh-HHhc-----hHHHhccCcEEEecCCCCCCCCc--ch--hhhchh
Q 021980 14 WTWRGHKIHYVVQGE----GSPVVLIHGFGASAFH-WRYN-----IPELAKRYKVYAVDLLGFGWSEK--AI--IEYDAM 79 (304)
Q Consensus 14 ~~~~g~~~~y~~~g~----g~~iv~lHG~~~~~~~-~~~~-----~~~l~~~~~vi~~D~~G~G~S~~--~~--~~~~~~ 79 (304)
++..-..+++...|+ +|++|=.|-.|.+..+ |... ...+.++|-++-+|.||+..-.. +. .-.+++
T Consensus 4 v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd 83 (283)
T PF03096_consen 4 VETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMD 83 (283)
T ss_dssp EEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT-----HH
T ss_pred eccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccccCHH
Confidence 455556788888774 4566668988877765 4432 23456789999999999975322 21 234678
Q ss_pred hHHHHHHHHHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHH
Q 021980 80 VWKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIF 159 (304)
Q Consensus 80 ~~~~~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (304)
++++++.+.++.++++.++-+|--.||.|-..+|.+||++|.++|++++.+.. ....++....+. ...+
T Consensus 84 ~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~--------~gw~Ew~~~K~~---~~~L 152 (283)
T PF03096_consen 84 QLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTA--------AGWMEWFYQKLS---SWLL 152 (283)
T ss_dssp HHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S-----------HHHHHHHHHH-------
T ss_pred HHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCC--------ccHHHHHHHHHh---cccc
Confidence 88999999999999999999999999999999999999999999999986421 011112211111 0000
Q ss_pred HHHHhhhhhhhhcchhHHHHHh-HhhhcCC--CCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCC
Q 021980 160 QRIVLGFLFWQAKQPARIVSVL-KSVYINS--SNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLS 236 (304)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 236 (304)
. .... .......+ ...|... ....+ +++.++..........+.......+. .+.++...++...
T Consensus 153 ~--------~~gm-t~~~~d~Ll~h~Fg~~~~~~n~D-lv~~yr~~l~~~~Np~Nl~~f~~sy~---~R~DL~~~~~~~~ 219 (283)
T PF03096_consen 153 Y--------SYGM-TSSVKDYLLWHYFGKEEEENNSD-LVQTYRQHLDERINPKNLALFLNSYN---SRTDLSIERPSLG 219 (283)
T ss_dssp -----------CT-TS-HHHHHHHHHS-HHHHHCT-H-HHHHHHHHHHT-TTHHHHHHHHHHHH---T-----SECTTCC
T ss_pred c--------cccc-ccchHHhhhhcccccccccccHH-HHHHHHHHHhcCCCHHHHHHHHHHHh---ccccchhhcCCCC
Confidence 0 0000 00000000 0011000 00011 11111110000011111112222221 3455566667788
Q ss_pred CceEEEecCCCCCCCcHHHHHHHHhC-CC-ceEEEe-CCCCCCCccChHHHHHHHHHHHhcc
Q 021980 237 CPLLLLWGDLDPWVGSAKATRIKEFY-PN-TTLVNF-QAGHCPHDEVPELVNKALMDWLSTV 295 (304)
Q Consensus 237 ~P~lii~G~~D~~~~~~~~~~~~~~~-~~-~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~~~ 295 (304)
||+|++.|+..+.. +...++.... |. ..+..+ ++|=.+..|+|+++++.++-||+..
T Consensus 220 c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 220 CPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp S-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred CCeEEEEecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 99999999988653 3445555554 43 456667 7999999999999999999999764
No 77
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.62 E-value=9.5e-15 Score=110.96 Aligned_cols=218 Identities=20% Similarity=0.213 Sum_probs=129.7
Q ss_pred cCCCCcEEEEcccCCChhh--HHhchHHHhc-cCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcC-CC--eEE
Q 021980 26 QGEGSPVVLIHGFGASAFH--WRYNIPELAK-RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVK-EP--AVL 99 (304)
Q Consensus 26 ~g~g~~iv~lHG~~~~~~~--~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~-~~--~~l 99 (304)
.|+...+|++||+-++... ...++.++++ ++.++.+|++|-|.|+..-..-.....|+|+...++.+-. .+ -++
T Consensus 30 tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi 109 (269)
T KOG4667|consen 30 TGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVI 109 (269)
T ss_pred cCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEE
Confidence 4556789999999876643 4566777764 6999999999999998653211222345888888877643 33 379
Q ss_pred EEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHH
Q 021980 100 VGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVS 179 (304)
Q Consensus 100 vGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (304)
+|||-||.+++.||.++.+ ++-++.+++-.. .. ..+... +.+. .+..
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRyd--l~---------~~I~eR----lg~~-----------------~l~~ 156 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD-IRNVINCSGRYD--LK---------NGINER----LGED-----------------YLER 156 (269)
T ss_pred EeecCccHHHHHHHHhhcC-chheEEcccccc--hh---------cchhhh----hccc-----------------HHHH
Confidence 9999999999999999987 665665433111 00 000000 0000 0000
Q ss_pred HhHhhhcCCCCCChHHHHhhhCCCCCCchHH-HHHHHHHHHHhhccccchhhhhcc--CCCceEEEecCCCCCCCcHHHH
Q 021980 180 VLKSVYINSSNVDDYLVESITRPAADPNAAE-VYYRLMTRFMLNQSKYTLDSVLSK--LSCPLLLLWGDLDPWVGSAKAT 256 (304)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~--i~~P~lii~G~~D~~~~~~~~~ 256 (304)
....-|++...-.. ........+ ...++ ..++.+...+ .+||||-+||-.|.++|.+.+.
T Consensus 157 ike~Gfid~~~rkG--------~y~~rvt~eSlmdrL---------ntd~h~aclkId~~C~VLTvhGs~D~IVPve~Ak 219 (269)
T KOG4667|consen 157 IKEQGFIDVGPRKG--------KYGYRVTEESLMDRL---------NTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAK 219 (269)
T ss_pred HHhCCceecCcccC--------CcCceecHHHHHHHH---------hchhhhhhcCcCccCceEEEeccCCceeechhHH
Confidence 11111111000000 000000000 00010 1122233333 4899999999999999999999
Q ss_pred HHHHhCCCceEEEe-CCCCCCCccChHHHHHHHHHHHhc
Q 021980 257 RIKEFYPNTTLVNF-QAGHCPHDEVPELVNKALMDWLST 294 (304)
Q Consensus 257 ~~~~~~~~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~~ 294 (304)
++++.+|+..+.++ ++.|..-..+ .+.+.+...|.+.
T Consensus 220 efAk~i~nH~L~iIEgADHnyt~~q-~~l~~lgl~f~k~ 257 (269)
T KOG4667|consen 220 EFAKIIPNHKLEIIEGADHNYTGHQ-SQLVSLGLEFIKT 257 (269)
T ss_pred HHHHhccCCceEEecCCCcCccchh-hhHhhhcceeEEe
Confidence 99999999999988 5889865443 3444566666653
No 78
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.62 E-value=2.6e-15 Score=124.33 Aligned_cols=115 Identities=22% Similarity=0.269 Sum_probs=82.8
Q ss_pred CeeEEEEecC-CCCcEEEEcccCCCh-hhHHhch-HH-Hh-ccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHh
Q 021980 18 GHKIHYVVQG-EGSPVVLIHGFGASA-FHWRYNI-PE-LA-KRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI 92 (304)
Q Consensus 18 g~~~~y~~~g-~g~~iv~lHG~~~~~-~~~~~~~-~~-l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~ 92 (304)
+..+.+.... ++|++|++|||+++. ..|...+ .. +. ++++|+++|++|++.+..+....+...+++++.++++.+
T Consensus 24 ~~~~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L 103 (275)
T cd00707 24 PSSLKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFL 103 (275)
T ss_pred hhhhhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHH
Confidence 3445554444 368899999999887 6675443 33 34 469999999999854433322234444455666665544
Q ss_pred ------cCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCC
Q 021980 93 ------VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQF 132 (304)
Q Consensus 93 ------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~ 132 (304)
..++++||||||||.+|..++.++|+++.+++.++|++..
T Consensus 104 ~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 104 VDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 3468999999999999999999999999999999987653
No 79
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.61 E-value=8.1e-14 Score=116.02 Aligned_cols=101 Identities=19% Similarity=0.268 Sum_probs=72.1
Q ss_pred CCcEEEEcccCCChhhHHhc--hHHHhc--cCcEEEecC--CCCCCCCcc--------------------hhhhchhh-H
Q 021980 29 GSPVVLIHGFGASAFHWRYN--IPELAK--RYKVYAVDL--LGFGWSEKA--------------------IIEYDAMV-W 81 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~~~~~--~~~l~~--~~~vi~~D~--~G~G~S~~~--------------------~~~~~~~~-~ 81 (304)
.|+|+|+||++++...|... +..+.. ++.||++|. +|+|.+... ...+.... .
T Consensus 42 ~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~ 121 (275)
T TIGR02821 42 VPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYI 121 (275)
T ss_pred CCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHH
Confidence 46789999999998888542 345543 699999998 555533210 00112222 2
Q ss_pred HHHHHHHHHH---hcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCC
Q 021980 82 KDQIVDFLKE---IVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 82 ~~~l~~~~~~---~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~ 129 (304)
++++..++++ ++.++++++||||||.+|+.++.++|+.+++++++++.
T Consensus 122 ~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 122 VQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred HHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 4566666665 34568999999999999999999999999999998764
No 80
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.59 E-value=1.4e-12 Score=104.04 Aligned_cols=257 Identities=17% Similarity=0.221 Sum_probs=147.1
Q ss_pred cCeeEEEEecCC----CCcEEEEcccCCChhh-HHhc-----hHHHhccCcEEEecCCCCCCCCc--ch--hhhchhhHH
Q 021980 17 RGHKIHYVVQGE----GSPVVLIHGFGASAFH-WRYN-----IPELAKRYKVYAVDLLGFGWSEK--AI--IEYDAMVWK 82 (304)
Q Consensus 17 ~g~~~~y~~~g~----g~~iv~lHG~~~~~~~-~~~~-----~~~l~~~~~vi~~D~~G~G~S~~--~~--~~~~~~~~~ 82 (304)
.-..+|+...|+ +|.++=.|..+.+..+ |... ...+.++|-++.+|-|||-.--. +. .-.++++.+
T Consensus 30 ~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LA 109 (326)
T KOG2931|consen 30 AHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLA 109 (326)
T ss_pred ccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCCCCCCHHHHH
Confidence 335677777773 3455557988887655 4432 23345679999999999964321 21 234778899
Q ss_pred HHHHHHHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHH
Q 021980 83 DQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRI 162 (304)
Q Consensus 83 ~~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (304)
+++...++.++.+-++-+|--.|+.|-.+||.+||++|.+||+|++.+... .|.+.+..+-....+...
T Consensus 110 d~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~-----------gwiew~~~K~~s~~l~~~ 178 (326)
T KOG2931|consen 110 DMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAK-----------GWIEWAYNKVSSNLLYYY 178 (326)
T ss_pred HHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCc-----------hHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999754311 112111111111000000
Q ss_pred HhhhhhhhhcchhHHHHHhH-hhhcCCCC-CChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhc----cCC
Q 021980 163 VLGFLFWQAKQPARIVSVLK-SVYINSSN-VDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLS----KLS 236 (304)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~i~ 236 (304)
..-......+- ..|..+.. ....++..++.......+..........+. .+.++....+ .++
T Consensus 179 ---------Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn---~R~DL~~~r~~~~~tlk 246 (326)
T KOG2931|consen 179 ---------GMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYN---GRRDLSIERPKLGTTLK 246 (326)
T ss_pred ---------chhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhc---CCCCccccCCCcCcccc
Confidence 00000111111 11111111 011111111111111111111111222221 1223322222 456
Q ss_pred CceEEEecCCCCCCCcHHHHHHHHhC-C-CceEEEe-CCCCCCCccChHHHHHHHHHHHhccCCC
Q 021980 237 CPLLLLWGDLDPWVGSAKATRIKEFY-P-NTTLVNF-QAGHCPHDEVPELVNKALMDWLSTVKPQ 298 (304)
Q Consensus 237 ~P~lii~G~~D~~~~~~~~~~~~~~~-~-~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~~~~~~ 298 (304)
||+|++.|++.+.+. ...+..... | +..+..+ ++|-.++.|+|+++++.++-|++..-.-
T Consensus 247 c~vllvvGd~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~Gy~ 309 (326)
T KOG2931|consen 247 CPVLLVVGDNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMGYL 309 (326)
T ss_pred ccEEEEecCCCchhh--hhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccCCcc
Confidence 999999999986543 334444443 3 3556666 7999999999999999999999764433
No 81
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.58 E-value=1.2e-14 Score=119.04 Aligned_cols=112 Identities=24% Similarity=0.402 Sum_probs=94.7
Q ss_pred EEcCeeEEEEecCC--------CCcEEEEcccCCChhhHHhchHHHhcc----------CcEEEecCCCCCCCCcc-hhh
Q 021980 15 TWRGHKIHYVVQGE--------GSPVVLIHGFGASAFHWRYNIPELAKR----------YKVYAVDLLGFGWSEKA-IIE 75 (304)
Q Consensus 15 ~~~g~~~~y~~~g~--------g~~iv~lHG~~~~~~~~~~~~~~l~~~----------~~vi~~D~~G~G~S~~~-~~~ 75 (304)
.+.|.+|||...-+ -.|+|++|||++|-..+-..++.|.+. |.||++.+||+|.|+.+ ...
T Consensus 130 eIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~G 209 (469)
T KOG2565|consen 130 EIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTG 209 (469)
T ss_pred hhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCC
Confidence 48999999976431 148999999999999888888988432 78999999999999875 345
Q ss_pred hchhhHHHHHHHHHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEe
Q 021980 76 YDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALL 126 (304)
Q Consensus 76 ~~~~~~~~~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli 126 (304)
+.....|.-+..++-.++.+++.|=|-+||+.|+..+|..+|++|.++-+-
T Consensus 210 Fn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHln 260 (469)
T KOG2565|consen 210 FNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLN 260 (469)
T ss_pred ccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhc
Confidence 666667777888888999999999999999999999999999999987753
No 82
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.57 E-value=1.5e-13 Score=110.05 Aligned_cols=102 Identities=16% Similarity=0.138 Sum_probs=68.0
Q ss_pred CCCcEEEEcccCCChhhHH---hchHHHh-ccCcEEEecCCCCCCCCcch----hhh--chhhHHHHHHHHHH----Hhc
Q 021980 28 EGSPVVLIHGFGASAFHWR---YNIPELA-KRYKVYAVDLLGFGWSEKAI----IEY--DAMVWKDQIVDFLK----EIV 93 (304)
Q Consensus 28 ~g~~iv~lHG~~~~~~~~~---~~~~~l~-~~~~vi~~D~~G~G~S~~~~----~~~--~~~~~~~~l~~~~~----~~~ 93 (304)
+.|.||++||.+++...|. .+...+. .+|.|+++|.+|+|.+.... ... .......++.++++ ...
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 4577899999998877765 2333333 35999999999997543210 000 00001122222222 222
Q ss_pred --CCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCC
Q 021980 94 --KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 94 --~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~ 129 (304)
.++++|+|||+||.+++.++..+|+++.+++.+++.
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~ 129 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGL 129 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCC
Confidence 358999999999999999999999999999988764
No 83
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.57 E-value=7.2e-13 Score=116.91 Aligned_cols=240 Identities=12% Similarity=0.107 Sum_probs=130.3
Q ss_pred CCcEEEEcccCCChhhH-----HhchHHH-hccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHh----cCCCeE
Q 021980 29 GSPVVLIHGFGASAFHW-----RYNIPEL-AKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI----VKEPAV 98 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~~-----~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~ 98 (304)
+.|||+++.+-.-.+.| +.++..| .++++|+++|+++=+.++. ..+.++|++.+.+.++.+ +.++++
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r---~~~ldDYv~~i~~Ald~V~~~tG~~~vn 291 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR---EWGLSTYVDALKEAVDAVRAITGSRDLN 291 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc---CCCHHHHHHHHHHHHHHHHHhcCCCCee
Confidence 57999999987666666 3566776 5679999999998776643 355566666666666554 467899
Q ss_pred EEEechhHHHHHH----HHhcCCc-ceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHH--HHHHHhhhhhhhh
Q 021980 99 LVGNSLGGFAALV----AAVGLPD-QVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEI--FQRIVLGFLFWQA 171 (304)
Q Consensus 99 lvGhS~Gg~va~~----~a~~~p~-~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 171 (304)
++|+||||.++.. +++.+++ +|++++++.+...+..............+.. ........ .....+...+...
T Consensus 292 l~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~-~e~~~~~~G~lpg~~ma~~F~~L 370 (560)
T TIGR01839 292 LLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEA-AKRRSYQAGVLDGSEMAKVFAWM 370 (560)
T ss_pred EEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHH-HHHHHHhcCCcCHHHHHHHHHhc
Confidence 9999999999886 8888886 8999999887665443211110000011100 00000000 0000001111111
Q ss_pred cchhHHHHHhHhhh-cCCCC-CChHHHHhhhCCCCCCchHHHHHHHHHHHHhhcc-----ccch---hhhhccCCCceEE
Q 021980 172 KQPARIVSVLKSVY-INSSN-VDDYLVESITRPAADPNAAEVYYRLMTRFMLNQS-----KYTL---DSVLSKLSCPLLL 241 (304)
Q Consensus 172 ~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---~~~l~~i~~P~li 241 (304)
+....+.......+ ..+.. ..+ ............ ...+.... .+...+. .+.+ .-.+++|+||+++
T Consensus 371 rP~dliw~y~v~~yllg~~p~~fd--ll~Wn~D~t~lP-g~~~~e~l-~ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl~ 446 (560)
T TIGR01839 371 RPNDLIWNYWVNNYLLGNEPPAFD--ILYWNNDTTRLP-AAFHGDLL-DMFKSNPLTRPDALEVCGTPIDLKKVKCDSFS 446 (560)
T ss_pred CchhhhHHHHHHHhhcCCCcchhh--HHHHhCcCccch-HHHHHHHH-HHHhcCCCCCCCCEEECCEEechhcCCCCeEE
Confidence 11111111111111 11111 111 112221111111 12222222 2222111 1111 1236899999999
Q ss_pred EecCCCCCCCcHHHHHHHHhCCC-ceEEEeCCCCCC
Q 021980 242 LWGDLDPWVGSAKATRIKEFYPN-TTLVNFQAGHCP 276 (304)
Q Consensus 242 i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~GH~~ 276 (304)
+.|+.|.++|.+.+..+.+.+.. .+++..++||.-
T Consensus 447 va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~gGHIg 482 (560)
T TIGR01839 447 VAGTNDHITPWDAVYRSALLLGGKRRFVLSNSGHIQ 482 (560)
T ss_pred EecCcCCcCCHHHHHHHHHHcCCCeEEEecCCCccc
Confidence 99999999999999999988865 344445899953
No 84
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.53 E-value=3.8e-13 Score=107.86 Aligned_cols=187 Identities=21% Similarity=0.275 Sum_probs=108.1
Q ss_pred hchHHH-hccCcEEEecCCCCCCCCcchhh----hchhhHHHHHHHHHHHh------cCCCeEEEEechhHHHHHHHHhc
Q 021980 47 YNIPEL-AKRYKVYAVDLLGFGWSEKAIIE----YDAMVWKDQIVDFLKEI------VKEPAVLVGNSLGGFAALVAAVG 115 (304)
Q Consensus 47 ~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~----~~~~~~~~~l~~~~~~~------~~~~~~lvGhS~Gg~va~~~a~~ 115 (304)
.....| +.+|.|+.+|+||.+........ .......+|+.+.++.+ +.+++.++|||+||.+++.++.+
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 344566 56799999999999854322111 00111234555554443 34689999999999999999999
Q ss_pred CCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHH
Q 021980 116 LPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYL 195 (304)
Q Consensus 116 ~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (304)
+|+++++++..++......... ....+. .. .. .. +.
T Consensus 85 ~~~~f~a~v~~~g~~d~~~~~~-----~~~~~~------------~~-------------~~---~~--~~--------- 120 (213)
T PF00326_consen 85 HPDRFKAAVAGAGVSDLFSYYG-----TTDIYT------------KA-------------EY---LE--YG--------- 120 (213)
T ss_dssp TCCGSSEEEEESE-SSTTCSBH-----HTCCHH------------HG-------------HH---HH--HS---------
T ss_pred cceeeeeeeccceecchhcccc-----cccccc------------cc-------------cc---cc--cC---------
Confidence 9999999998876432111100 000000 00 00 00 00
Q ss_pred HHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhcc--CCCceEEEecCCCCCCCcHHHHHHHHhC----CCceEEE
Q 021980 196 VESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSK--LSCPLLLLWGDLDPWVGSAKATRIKEFY----PNTTLVN 269 (304)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~P~lii~G~~D~~~~~~~~~~~~~~~----~~~~~~~ 269 (304)
.+ . .....+ +... ....+.+ +++|+|++||++|..+|...+..+.+.. ...++++
T Consensus 121 -----~~-~--~~~~~~-~~~s----------~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~ 181 (213)
T PF00326_consen 121 -----DP-W--DNPEFY-RELS----------PISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLI 181 (213)
T ss_dssp -----ST-T--TSHHHH-HHHH----------HGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEE
T ss_pred -----cc-c--hhhhhh-hhhc----------cccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEE
Confidence 00 0 001111 1110 0111233 8899999999999999998777665443 3467788
Q ss_pred e-CCCCCCC-ccChHHHHHHHHHHHhccC
Q 021980 270 F-QAGHCPH-DEVPELVNKALMDWLSTVK 296 (304)
Q Consensus 270 ~-~~GH~~~-~e~p~~~~~~i~~fl~~~~ 296 (304)
+ ++||... .+......+.+.+|+++..
T Consensus 182 ~p~~gH~~~~~~~~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 182 FPGEGHGFGNPENRRDWYERILDFFDKYL 210 (213)
T ss_dssp ETT-SSSTTSHHHHHHHHHHHHHHHHHHT
T ss_pred cCcCCCCCCCchhHHHHHHHHHHHHHHHc
Confidence 8 6899544 5666678889999997653
No 85
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.53 E-value=1.1e-12 Score=119.51 Aligned_cols=114 Identities=20% Similarity=0.116 Sum_probs=83.1
Q ss_pred EcCeeEEEEec---C--CCCcEEEEcccCCChh---hHHh-chHHH-hccCcEEEecCCCCCCCCcchhhhchhhHHHHH
Q 021980 16 WRGHKIHYVVQ---G--EGSPVVLIHGFGASAF---HWRY-NIPEL-AKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQI 85 (304)
Q Consensus 16 ~~g~~~~y~~~---g--~g~~iv~lHG~~~~~~---~~~~-~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l 85 (304)
.||.++++... + +.|+||++||++.+.. .+.. ....| +++|.|+++|+||+|.|+.....++ ...++|+
T Consensus 4 ~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~-~~~~~D~ 82 (550)
T TIGR00976 4 RDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG-SDEAADG 82 (550)
T ss_pred CCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC-cccchHH
Confidence 47888885432 2 3467899999987653 2222 33444 5689999999999999986533332 3345666
Q ss_pred HHHHHHhc-----CCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCC
Q 021980 86 VDFLKEIV-----KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 130 (304)
Q Consensus 86 ~~~~~~~~-----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~ 130 (304)
.++++.+. ..++.++|||+||.+++.+|..+|+++++++..++..
T Consensus 83 ~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 83 YDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred HHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 66666542 2589999999999999999999999999999887654
No 86
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.52 E-value=8.6e-14 Score=127.67 Aligned_cols=104 Identities=18% Similarity=0.132 Sum_probs=82.1
Q ss_pred cEEEEcCeeEEEEecCCC-----------CcEEEEcccCCChhhHHhchHHHh-ccCcEEEecCCCCCCCCcc-------
Q 021980 12 NFWTWRGHKIHYVVQGEG-----------SPVVLIHGFGASAFHWRYNIPELA-KRYKVYAVDLLGFGWSEKA------- 72 (304)
Q Consensus 12 ~~~~~~g~~~~y~~~g~g-----------~~iv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~------- 72 (304)
++...++.++.|...|.| |+|||+||++++...|..+++.|. .+|+|+++|+||||.|...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~ 500 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVN 500 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCcccccccccccc
Confidence 677888888888876654 368999999999999999999997 5799999999999998332
Q ss_pred -----hhhh-----------chhhHHHHHHHHHHHhc----------------CCCeEEEEechhHHHHHHHHhc
Q 021980 73 -----IIEY-----------DAMVWKDQIVDFLKEIV----------------KEPAVLVGNSLGGFAALVAAVG 115 (304)
Q Consensus 73 -----~~~~-----------~~~~~~~~l~~~~~~~~----------------~~~~~lvGhS~Gg~va~~~a~~ 115 (304)
...| ...+.+.|+..++..+. ..+++++||||||.++..++..
T Consensus 501 a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 501 ATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred ccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 0001 34556667776666655 3489999999999999999975
No 87
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.52 E-value=7.6e-13 Score=132.72 Aligned_cols=102 Identities=20% Similarity=0.188 Sum_probs=87.7
Q ss_pred cCCCCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcC-CCeEEEEech
Q 021980 26 QGEGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVK-EPAVLVGNSL 104 (304)
Q Consensus 26 ~g~g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~lvGhS~ 104 (304)
.|++++++|+||++++...|..+.+.|..+++|+++|+||+|.+.. ..++...+++++.+.+..+.. .+++++||||
T Consensus 1065 ~~~~~~l~~lh~~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~~~--~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~ 1142 (1296)
T PRK10252 1065 EGDGPTLFCFHPASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGPMQ--TATSLDEVCEAHLATLLEQQPHGPYHLLGYSL 1142 (1296)
T ss_pred cCCCCCeEEecCCCCchHHHHHHHHhcCCCCcEEEEECCCCCCCCC--CCCCHHHHHHHHHHHHHhhCCCCCEEEEEech
Confidence 4567899999999999999999999999899999999999997643 246777788888888887654 4899999999
Q ss_pred hHHHHHHHHhc---CCcceeEEEEecCC
Q 021980 105 GGFAALVAAVG---LPDQVTGVALLNSA 129 (304)
Q Consensus 105 Gg~va~~~a~~---~p~~v~~lvli~~~ 129 (304)
||++|+++|.+ .++++..++++++.
T Consensus 1143 Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1143 GGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred hhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 99999999985 58899999998864
No 88
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.49 E-value=2.1e-12 Score=118.99 Aligned_cols=224 Identities=22% Similarity=0.277 Sum_probs=128.2
Q ss_pred CccEEEEcCeeEEEEecCC---C-----CcEEEEcccCCChhhH--HhchHHH-hccCcEEEecCCCCCCCCc-----ch
Q 021980 10 GYNFWTWRGHKIHYVVQGE---G-----SPVVLIHGFGASAFHW--RYNIPEL-AKRYKVYAVDLLGFGWSEK-----AI 73 (304)
Q Consensus 10 ~~~~~~~~g~~~~y~~~g~---g-----~~iv~lHG~~~~~~~~--~~~~~~l-~~~~~vi~~D~~G~G~S~~-----~~ 73 (304)
..++.+.||.+++....-+ + |.||++||.+.....| ......| ..+|.|+.++.||-+.-.. ..
T Consensus 367 ~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~ 446 (620)
T COG1506 367 PVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIR 446 (620)
T ss_pred EEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhh
Confidence 3466677898888765432 2 5688999987655543 3333444 5679999999997654211 11
Q ss_pred hhhchhhHHHHHHHHHH---Hhc---CCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHH
Q 021980 74 IEYDAMVWKDQIVDFLK---EIV---KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTL 147 (304)
Q Consensus 74 ~~~~~~~~~~~l~~~~~---~~~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 147 (304)
.++... ..+|+.+.++ +.. .+++.+.|||.||..++..+.+.| ++++.+...+... ++
T Consensus 447 ~~~g~~-~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~--------------~~ 510 (620)
T COG1506 447 GDWGGV-DLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVD--------------WL 510 (620)
T ss_pred hccCCc-cHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcch--------------hh
Confidence 111111 1233333333 332 247999999999999999999998 5555554432110 00
Q ss_pred HHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccc
Q 021980 148 QKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYT 227 (304)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (304)
..+.. ....+.. .+. +....+ ....+.+.+ ..
T Consensus 511 ~~~~~---------~~~~~~~----~~~---------------------~~~~~~---~~~~~~~~~-----------~s 542 (620)
T COG1506 511 LYFGE---------STEGLRF----DPE---------------------ENGGGP---PEDREKYED-----------RS 542 (620)
T ss_pred hhccc---------cchhhcC----CHH---------------------HhCCCc---ccChHHHHh-----------cC
Confidence 00000 0000000 000 000000 000111111 11
Q ss_pred hhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCC----CceEEEe-CCCCCCCc-cChHHHHHHHHHHHhccCC
Q 021980 228 LDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYP----NTTLVNF-QAGHCPHD-EVPELVNKALMDWLSTVKP 297 (304)
Q Consensus 228 ~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~-~~GH~~~~-e~p~~~~~~i~~fl~~~~~ 297 (304)
......++++|+|+|||++|.-++.+.+..+.+.+. ..+++++ +.||.+-. ++-..+.+.+.+|+++...
T Consensus 543 p~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 543 PIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred hhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 123357899999999999999999988877765543 3567778 68998765 5566777888888876543
No 89
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.48 E-value=4.4e-11 Score=98.57 Aligned_cols=101 Identities=22% Similarity=0.298 Sum_probs=81.6
Q ss_pred CcEEEEcccCCChhhHHhchHHHh----ccCcEEEecCCCCCCCCcc------hhhhchhhHHHHHHHHHHHhcC-----
Q 021980 30 SPVVLIHGFGASAFHWRYNIPELA----KRYKVYAVDLLGFGWSEKA------IIEYDAMVWKDQIVDFLKEIVK----- 94 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~~~~~~~~l~----~~~~vi~~D~~G~G~S~~~------~~~~~~~~~~~~l~~~~~~~~~----- 94 (304)
.-+||++|.++--..|...+..|. .++.|+++.+.||-.++.. ...++.++..+...++++++..
T Consensus 3 ~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~~ 82 (266)
T PF10230_consen 3 PLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNKP 82 (266)
T ss_pred EEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcCC
Confidence 357899999999999988777764 4699999999999877553 2356677777776777766533
Q ss_pred -CCeEEEEechhHHHHHHHHhcCC---cceeEEEEecCCC
Q 021980 95 -EPAVLVGNSLGGFAALVAAVGLP---DQVTGVALLNSAG 130 (304)
Q Consensus 95 -~~~~lvGhS~Gg~va~~~a~~~p---~~v~~lvli~~~~ 130 (304)
.+++|+|||+|+.+++++..+++ .+|.+++++-|+.
T Consensus 83 ~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 83 NVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred CCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 46999999999999999999999 8899999998764
No 90
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.48 E-value=1.2e-12 Score=105.00 Aligned_cols=171 Identities=22% Similarity=0.259 Sum_probs=97.5
Q ss_pred CCcEEEEcccCCChhhHHhchHH-H-hccCcEEEecCCC------CCC---C--------Ccc-hhhhchhhHHHHHHHH
Q 021980 29 GSPVVLIHGFGASAFHWRYNIPE-L-AKRYKVYAVDLLG------FGW---S--------EKA-IIEYDAMVWKDQIVDF 88 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~~~~~~~~-l-~~~~~vi~~D~~G------~G~---S--------~~~-~~~~~~~~~~~~l~~~ 88 (304)
.+.||||||+|.+...|...... + ..+.+++.+.-|- .|. + ... ...-.....++.+.++
T Consensus 14 ~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~~l 93 (216)
T PF02230_consen 14 KPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLDEL 93 (216)
T ss_dssp SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHHHH
T ss_pred ceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHHHH
Confidence 46788999999999777665442 2 2346666654431 222 1 000 0111222233445555
Q ss_pred HHHh-----cCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHH
Q 021980 89 LKEI-----VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIV 163 (304)
Q Consensus 89 ~~~~-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (304)
++.. ..++++|.|.|.||++++.++.++|+.+.+++++++......
T Consensus 94 i~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~----------------------------- 144 (216)
T PF02230_consen 94 IDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPES----------------------------- 144 (216)
T ss_dssp HHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGC-----------------------------
T ss_pred HHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccc-----------------------------
Confidence 5432 235799999999999999999999999999999875211000
Q ss_pred hhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEe
Q 021980 164 LGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLW 243 (304)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 243 (304)
. . . ....... ++|++++|
T Consensus 145 --------------------------~-------------~-~--------------------~~~~~~~--~~pi~~~h 162 (216)
T PF02230_consen 145 --------------------------E-------------L-E--------------------DRPEALA--KTPILIIH 162 (216)
T ss_dssp --------------------------C-------------C-H--------------------CCHCCCC--TS-EEEEE
T ss_pred --------------------------c-------------c-c--------------------ccccccC--CCcEEEEe
Confidence 0 0 0 0000011 67999999
Q ss_pred cCCCCCCCcHHHHHHHHhC----CCceEEEeC-CCCCCCccChHHHHHHHHHHHhc
Q 021980 244 GDLDPWVGSAKATRIKEFY----PNTTLVNFQ-AGHCPHDEVPELVNKALMDWLST 294 (304)
Q Consensus 244 G~~D~~~~~~~~~~~~~~~----~~~~~~~~~-~GH~~~~e~p~~~~~~i~~fl~~ 294 (304)
|++|+++|.+.++...+.+ .+.++..++ .||.+. .+..+.+.+||.+
T Consensus 163 G~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 163 GDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEK 214 (216)
T ss_dssp ETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHH
T ss_pred cCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhh
Confidence 9999999988776665554 346777886 899764 3444567888865
No 91
>COG0400 Predicted esterase [General function prediction only]
Probab=99.44 E-value=3.3e-12 Score=100.04 Aligned_cols=97 Identities=18% Similarity=0.200 Sum_probs=65.7
Q ss_pred CcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCC--------CCcchhhhc-------hhhHHHHHHHHHHHhcC
Q 021980 30 SPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGW--------SEKAIIEYD-------AMVWKDQIVDFLKEIVK 94 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~--------S~~~~~~~~-------~~~~~~~l~~~~~~~~~ 94 (304)
+.||++||+|++...+-.....+..+++++.+ ||-=. +......++ ...+++.+.+..++.++
T Consensus 19 ~~iilLHG~Ggde~~~~~~~~~~~P~~~~is~--rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~gi 96 (207)
T COG0400 19 PLLILLHGLGGDELDLVPLPELILPNATLVSP--RGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYGI 96 (207)
T ss_pred cEEEEEecCCCChhhhhhhhhhcCCCCeEEcC--CCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhCC
Confidence 45899999999988877755555566666654 22110 111111222 22334455555556665
Q ss_pred --CCeEEEEechhHHHHHHHHhcCCcceeEEEEecC
Q 021980 95 --EPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNS 128 (304)
Q Consensus 95 --~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~ 128 (304)
++++++|+|-||++++.+..++|+.++++++..+
T Consensus 97 ~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g 132 (207)
T COG0400 97 DSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSG 132 (207)
T ss_pred ChhheEEEecChHHHHHHHHHHhCchhhccchhcCC
Confidence 6899999999999999999999999998888765
No 92
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.43 E-value=2.6e-11 Score=104.16 Aligned_cols=262 Identities=13% Similarity=0.146 Sum_probs=146.2
Q ss_pred CcEEEEcccCCChhhH-HhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEechhHHH
Q 021980 30 SPVVLIHGFGASAFHW-RYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFA 108 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~~-~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~Gg~v 108 (304)
+|||++.-+.+.-... +..++.|-+++.|+..|+.--+..+.....++.++|++.+.++++.++.+ ++|+|.++||..
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~ 181 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAVP 181 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhHH
Confidence 6899998877655443 56777776699999999988876654445678888899999999888777 999999999999
Q ss_pred HHHHHhcC-----CcceeEEEEecCCCCCCCCCCCC----CchhhhHHHHHHhhHHHHH----HHHHHhhhhh---hhhc
Q 021980 109 ALVAAVGL-----PDQVTGVALLNSAGQFGDGRKGS----NQSEESTLQKVFLKPLKEI----FQRIVLGFLF---WQAK 172 (304)
Q Consensus 109 a~~~a~~~-----p~~v~~lvli~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~---~~~~ 172 (304)
++.+++.+ |+++++++++.++..+....... .....+++.+......... .++...++.. +...
T Consensus 182 ~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~m 261 (406)
T TIGR01849 182 VLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFISM 261 (406)
T ss_pred HHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHHc
Confidence 77666544 77899999998755433211000 0011111221111000000 0000000000 0011
Q ss_pred chhH----HHHHhHhhhcCC-CCCChHH--HHhhhCCCCCCchHHHHHHHHHHHHhhcc----ccchh---hhhccCC-C
Q 021980 173 QPAR----IVSVLKSVYINS-SNVDDYL--VESITRPAADPNAAEVYYRLMTRFMLNQS----KYTLD---SVLSKLS-C 237 (304)
Q Consensus 173 ~~~~----~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~l~~i~-~ 237 (304)
.|.+ .......+.... +...+.. .+.+. ...+. ..+.+.......+..+. .+... -.+++|+ +
T Consensus 262 np~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~-d~~dl-pge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~ 339 (406)
T TIGR01849 262 NLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYL-AVMDM-TAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRV 339 (406)
T ss_pred CcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhh-hccCC-cHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCccc
Confidence 1111 111111111111 1111110 01111 11111 13344444433332221 11111 2357899 9
Q ss_pred ceEEEecCCCCCCCcHHHHHHHHh---CCCc--eEEEe-CCCCCCCc---cChHHHHHHHHHHHhc
Q 021980 238 PLLLLWGDLDPWVGSAKATRIKEF---YPNT--TLVNF-QAGHCPHD---EVPELVNKALMDWLST 294 (304)
Q Consensus 238 P~lii~G~~D~~~~~~~~~~~~~~---~~~~--~~~~~-~~GH~~~~---e~p~~~~~~i~~fl~~ 294 (304)
|+|.|.|+.|.+++++....+.+. +|.. +.... ++||.-.. ..++++...|.+||.+
T Consensus 340 pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 340 ALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred ceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 999999999999999988888876 3543 34445 78997554 4667788889999865
No 93
>PRK10162 acetyl esterase; Provisional
Probab=99.39 E-value=2.8e-11 Score=102.78 Aligned_cols=102 Identities=18% Similarity=0.081 Sum_probs=69.1
Q ss_pred CCcEEEEcccC---CChhhHHhchHHHhc--cCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcC--CCeEEEE
Q 021980 29 GSPVVLIHGFG---ASAFHWRYNIPELAK--RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVK--EPAVLVG 101 (304)
Q Consensus 29 g~~iv~lHG~~---~~~~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~lvG 101 (304)
.+.||++||.+ ++...|+.+...|++ ++.|+.+|+|.......+..-.+.....+.+.+..+.+++ ++++|+|
T Consensus 81 ~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G 160 (318)
T PRK10162 81 QATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAG 160 (318)
T ss_pred CCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEE
Confidence 46788999965 455678888888865 6999999999765443221111111222333333444544 5899999
Q ss_pred echhHHHHHHHHhcC------CcceeEEEEecCCC
Q 021980 102 NSLGGFAALVAAVGL------PDQVTGVALLNSAG 130 (304)
Q Consensus 102 hS~Gg~va~~~a~~~------p~~v~~lvli~~~~ 130 (304)
+|+||.+++.++... +.++.+++++.+..
T Consensus 161 ~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 195 (318)
T PRK10162 161 DSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLY 195 (318)
T ss_pred ECHHHHHHHHHHHHHHhcCCCccChhheEEECCcc
Confidence 999999999998753 35788889887643
No 94
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.39 E-value=5.6e-11 Score=95.59 Aligned_cols=173 Identities=20% Similarity=0.199 Sum_probs=101.0
Q ss_pred CCCcEEEEcccCCChhhHHhchHHHh-ccCcEEEecCCCCCC---CCcchh--hh------chhhHHHHHHHHHHHhc--
Q 021980 28 EGSPVVLIHGFGASAFHWRYNIPELA-KRYKVYAVDLLGFGW---SEKAII--EY------DAMVWKDQIVDFLKEIV-- 93 (304)
Q Consensus 28 ~g~~iv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~---S~~~~~--~~------~~~~~~~~l~~~~~~~~-- 93 (304)
+.|.||++|++.+-....+.+.+.|+ .+|.|+++|+-+-.. ++.... .+ ..+...+++...++.+.
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 45789999998776666677788886 469999999765444 121110 01 01223345544444442
Q ss_pred ----CCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhh
Q 021980 94 ----KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFW 169 (304)
Q Consensus 94 ----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
.+++.++|+||||.+++.+|... +.+++.|..-+...
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~-------------------------------------- 133 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP-------------------------------------- 133 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS--------------------------------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC--------------------------------------
Confidence 35799999999999999999887 57777776543000
Q ss_pred hhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCC
Q 021980 170 QAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPW 249 (304)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 249 (304)
.....+...++++|+++++|++|+.
T Consensus 134 -------------------------------------------------------~~~~~~~~~~~~~P~l~~~g~~D~~ 158 (218)
T PF01738_consen 134 -------------------------------------------------------PPPPLEDAPKIKAPVLILFGENDPF 158 (218)
T ss_dssp -------------------------------------------------------GGGHHHHGGG--S-EEEEEETT-TT
T ss_pred -------------------------------------------------------CCcchhhhcccCCCEeecCccCCCC
Confidence 0000112356889999999999999
Q ss_pred CCcHHHHHHHHh----CCCceEEEeC-CCCCCCccC-----hH---HHHHHHHHHHhc
Q 021980 250 VGSAKATRIKEF----YPNTTLVNFQ-AGHCPHDEV-----PE---LVNKALMDWLST 294 (304)
Q Consensus 250 ~~~~~~~~~~~~----~~~~~~~~~~-~GH~~~~e~-----p~---~~~~~i~~fl~~ 294 (304)
++.+..+.+.+. -...++++++ ++|...... ++ +-.+.+.+|+++
T Consensus 159 ~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 159 FPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp S-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred CChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 998865555444 3567788885 899655322 22 334556677765
No 95
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.39 E-value=1e-10 Score=98.57 Aligned_cols=225 Identities=20% Similarity=0.203 Sum_probs=114.7
Q ss_pred cEEEEcCeeEEEEe---c-CCC--CcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCC-CCcc------------
Q 021980 12 NFWTWRGHKIHYVV---Q-GEG--SPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGW-SEKA------------ 72 (304)
Q Consensus 12 ~~~~~~g~~~~y~~---~-g~g--~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~-S~~~------------ 72 (304)
.|.+.+|.+++=.. . +.+ |.||.+||.++....|...+..-..++-|+.+|.||.|. |...
T Consensus 60 ~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~ 139 (320)
T PF05448_consen 60 SFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHI 139 (320)
T ss_dssp EEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSST
T ss_pred EEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHH
Confidence 46667777776321 2 222 568889999998877766655556789999999999993 3110
Q ss_pred -------hhhhchhhHHHHHHHHHHHh------cCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCC
Q 021980 73 -------IIEYDAMVWKDQIVDFLKEI------VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGS 139 (304)
Q Consensus 73 -------~~~~~~~~~~~~l~~~~~~~------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~ 139 (304)
...+.......+....++.+ +.+++.+.|.|.||.+++..|+..| +|++++...|..+-
T Consensus 140 ~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d------- 211 (320)
T PF05448_consen 140 TRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCD------- 211 (320)
T ss_dssp TTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSS-------
T ss_pred hcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccc-------
Confidence 00011111112333333322 2357999999999999999999876 68888887664320
Q ss_pred CchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHH
Q 021980 140 NQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRF 219 (304)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (304)
+.+.+..... ......+..+++.. ..........++.+
T Consensus 212 -------~~~~~~~~~~--------------~~~y~~~~~~~~~~------------------d~~~~~~~~v~~~L--- 249 (320)
T PF05448_consen 212 -------FRRALELRAD--------------EGPYPEIRRYFRWR------------------DPHHEREPEVFETL--- 249 (320)
T ss_dssp -------HHHHHHHT----------------STTTHHHHHHHHHH------------------SCTHCHHHHHHHHH---
T ss_pred -------hhhhhhcCCc--------------cccHHHHHHHHhcc------------------CCCcccHHHHHHHH---
Confidence 0000000000 00000011111100 00001111111111
Q ss_pred HhhccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCCC-ceEEEeC-CCCCCCccChHHH-HHHHHHHHhc
Q 021980 220 MLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYPN-TTLVNFQ-AGHCPHDEVPELV-NKALMDWLST 294 (304)
Q Consensus 220 ~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~-~GH~~~~e~p~~~-~~~i~~fl~~ 294 (304)
.-++.....+.|+||+++-.|-.|.++|+...-.+...++. .++.+++ .|| |.+.++ .+...+||.+
T Consensus 250 ----~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~H----e~~~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 250 ----SYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGH----EYGPEFQEDKQLNFLKE 319 (320)
T ss_dssp ----HTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--S----STTHHHHHHHHHHHHHH
T ss_pred ----hhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCC----CchhhHHHHHHHHHHhc
Confidence 12334445578999999999999999999987776666654 5666664 788 455555 7778888865
No 96
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.38 E-value=5.8e-12 Score=96.41 Aligned_cols=153 Identities=25% Similarity=0.412 Sum_probs=95.1
Q ss_pred EEEEcccCCCh-hhHHhch-HHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEechhHHHH
Q 021980 32 VVLIHGFGASA-FHWRYNI-PELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAA 109 (304)
Q Consensus 32 iv~lHG~~~~~-~~~~~~~-~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~Gg~va 109 (304)
|+++||++++. ..|.... ..+...++|-.+|+ +. .+...|.+.+.+.+... .++++|||||+|+..+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~------~~----P~~~~W~~~l~~~i~~~-~~~~ilVaHSLGc~~~ 69 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW------DN----PDLDEWVQALDQAIDAI-DEPTILVAHSLGCLTA 69 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC--------TS------HHHHHHHHHHCCHC--TTTEEEEEETHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc------CC----CCHHHHHHHHHHHHhhc-CCCeEEEEeCHHHHHH
Confidence 67899998765 4576554 44555566666665 22 24455667766666643 4569999999999999
Q ss_pred HHHH-hcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhHhhhcCC
Q 021980 110 LVAA-VGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLKSVYINS 188 (304)
Q Consensus 110 ~~~a-~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (304)
+.++ .....+|.+++++++.-.. . .. ..+..
T Consensus 70 l~~l~~~~~~~v~g~lLVAp~~~~--~-------~~---------------------------~~~~~------------ 101 (171)
T PF06821_consen 70 LRWLAEQSQKKVAGALLVAPFDPD--D-------PE---------------------------PFPPE------------ 101 (171)
T ss_dssp HHHHHHTCCSSEEEEEEES--SCG--C-------HH---------------------------CCTCG------------
T ss_pred HHHHhhcccccccEEEEEcCCCcc--c-------cc---------------------------chhhh------------
Confidence 9999 7888999999999864210 0 00 00000
Q ss_pred CCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCCCceEE
Q 021980 189 SNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLV 268 (304)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~ 268 (304)
+.. .. . .. ...+.+|.++|.+++|+++|.+.++++++.+ +++++
T Consensus 102 ----------~~~-f~--------------------~--~p--~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l-~a~~~ 145 (171)
T PF06821_consen 102 ----------LDG-FT--------------------P--LP--RDPLPFPSIVIASDNDPYVPFERAQRLAQRL-GAELI 145 (171)
T ss_dssp ----------GCC-CT--------------------T--SH--CCHHHCCEEEEEETTBSSS-HHHHHHHHHHH-T-EEE
T ss_pred ----------ccc-cc--------------------c--Cc--ccccCCCeEEEEcCCCCccCHHHHHHHHHHc-CCCeE
Confidence 000 00 0 00 1224567799999999999999999999988 78888
Q ss_pred Ee-CCCCCCCcc
Q 021980 269 NF-QAGHCPHDE 279 (304)
Q Consensus 269 ~~-~~GH~~~~e 279 (304)
.+ ++||+--.+
T Consensus 146 ~~~~~GHf~~~~ 157 (171)
T PF06821_consen 146 ILGGGGHFNAAS 157 (171)
T ss_dssp EETS-TTSSGGG
T ss_pred ECCCCCCccccc
Confidence 88 689986543
No 97
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.38 E-value=2.8e-11 Score=103.08 Aligned_cols=206 Identities=22% Similarity=0.317 Sum_probs=111.3
Q ss_pred cEEEE-cccCCChhh-HHhchHHH-hccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHh---cCCCeEEEEech
Q 021980 31 PVVLI-HGFGASAFH-WRYNIPEL-AKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI---VKEPAVLVGNSL 104 (304)
Q Consensus 31 ~iv~l-HG~~~~~~~-~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~lvGhS~ 104 (304)
|+|++ -|+-+-... |+...+.+ ..++.++++|+||-|.|.......+...+...+.+.+... +-.++.++|.||
T Consensus 191 P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~Sf 270 (411)
T PF06500_consen 191 PTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSF 270 (411)
T ss_dssp EEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETH
T ss_pred CEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCCccChhheEEEEecc
Confidence 55554 555555544 44444555 4679999999999999864332333344556777777664 335899999999
Q ss_pred hHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhHhh
Q 021980 105 GGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLKSV 184 (304)
Q Consensus 105 Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (304)
||.+|..+|..+++|++++|.+++.... ++... . +....|......+.
T Consensus 271 GGy~AvRlA~le~~RlkavV~~Ga~vh~-----------------~ft~~--~-----------~~~~~P~my~d~LA-- 318 (411)
T PF06500_consen 271 GGYYAVRLAALEDPRLKAVVALGAPVHH-----------------FFTDP--E-----------WQQRVPDMYLDVLA-- 318 (411)
T ss_dssp HHHHHHHHHHHTTTT-SEEEEES---SC-----------------GGH-H--H-----------HHTTS-HHHHHHHH--
T ss_pred chHHHHHHHHhcccceeeEeeeCchHhh-----------------hhccH--H-----------HHhcCCHHHHHHHH--
Confidence 9999999999999999999998764210 00000 0 00011111111110
Q ss_pred hcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccch--hhhh--ccCCCceEEEecCCCCCCCcHHHHHHHH
Q 021980 185 YINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTL--DSVL--SKLSCPLLLLWGDLDPWVGSAKATRIKE 260 (304)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l--~~i~~P~lii~G~~D~~~~~~~~~~~~~ 260 (304)
..+. ......+.+..-+ ..+++ ...+ ++..+|+|.+.|++|+++|.+....++.
T Consensus 319 ------------~rlG---~~~~~~~~l~~el-------~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~ 376 (411)
T PF06500_consen 319 ------------SRLG---MAAVSDESLRGEL-------NKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAE 376 (411)
T ss_dssp ------------HHCT----SCE-HHHHHHHG-------GGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHH
T ss_pred ------------HHhC---CccCCHHHHHHHH-------HhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHh
Confidence 0000 0000011111100 12232 2234 6788999999999999999999999998
Q ss_pred hCCCceEEEeCCC--CCCCccChHHHHHHHHHHHhc
Q 021980 261 FYPNTTLVNFQAG--HCPHDEVPELVNKALMDWLST 294 (304)
Q Consensus 261 ~~~~~~~~~~~~G--H~~~~e~p~~~~~~i~~fl~~ 294 (304)
.-.+.+...++.+ |+ .-++-...+.+||.+
T Consensus 377 ~s~~gk~~~~~~~~~~~----gy~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 377 SSTDGKALRIPSKPLHM----GYPQALDEIYKWLED 408 (411)
T ss_dssp TBTT-EEEEE-SSSHHH----HHHHHHHHHHHHHHH
T ss_pred cCCCCceeecCCCcccc----chHHHHHHHHHHHHH
Confidence 8877777777543 43 344566777788865
No 98
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.37 E-value=6.9e-11 Score=95.48 Aligned_cols=100 Identities=24% Similarity=0.314 Sum_probs=81.8
Q ss_pred CcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcC-CCeEEEEechhHHH
Q 021980 30 SPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVK-EPAVLVGNSLGGFA 108 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~lvGhS~Gg~v 108 (304)
+|++|+|+.+++...|..+...+.....|+.++.||+|.-... .-+.+++++...+.|.+... .+++|+|||+||.|
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~~--~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~v 78 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGEQP--FASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAV 78 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccCceeeccccCcccccccc--cCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccHH
Confidence 5789999999999999999999998899999999999853322 23455666777777776654 58999999999999
Q ss_pred HHHHHhc---CCcceeEEEEecCCCC
Q 021980 109 ALVAAVG---LPDQVTGVALLNSAGQ 131 (304)
Q Consensus 109 a~~~a~~---~p~~v~~lvli~~~~~ 131 (304)
|+.+|.+ .-+.|..|+++++...
T Consensus 79 A~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 79 AFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999986 3457999999998654
No 99
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.30 E-value=4.7e-10 Score=94.46 Aligned_cols=268 Identities=13% Similarity=0.159 Sum_probs=137.3
Q ss_pred CCcEEEEcccCCChhhHHh-----chHHH-hccCcEEEecCCCCCCCCcchhhhchhhHH-HHHHHH----HHHhcCCCe
Q 021980 29 GSPVVLIHGFGASAFHWRY-----NIPEL-AKRYKVYAVDLLGFGWSEKAIIEYDAMVWK-DQIVDF----LKEIVKEPA 97 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~~~~-----~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~-~~l~~~----~~~~~~~~~ 97 (304)
++|+|++|-+--.-..|+- .+..+ .++..|+.+|+++=..+.. ....++|. +.+.+. .+..+.+++
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~---~~~~edYi~e~l~~aid~v~~itg~~~I 183 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA---AKNLEDYILEGLSEAIDTVKDITGQKDI 183 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh---hccHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 5689999988776666642 33444 5679999999887554433 23333333 333333 333456899
Q ss_pred EEEEechhHHHHHHHHhcCCcc-eeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHH-HHHHHHhhhhhhhhcchh
Q 021980 98 VLVGNSLGGFAALVAAVGLPDQ-VTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKE-IFQRIVLGFLFWQAKQPA 175 (304)
Q Consensus 98 ~lvGhS~Gg~va~~~a~~~p~~-v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 175 (304)
.++|++.||++...+++.++.+ |++++++.+.-.+..............+..+-...... .+....+...+...+.-.
T Consensus 184 nliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpnd 263 (445)
T COG3243 184 NLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPND 263 (445)
T ss_pred ceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCccc
Confidence 9999999999999999998888 99999987655444322111111111111110000000 000000000111111101
Q ss_pred HHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhc----cccch---hhhhccCCCceEEEecCCCC
Q 021980 176 RIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQ----SKYTL---DSVLSKLSCPLLLLWGDLDP 248 (304)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~l~~i~~P~lii~G~~D~ 248 (304)
.....+-.-+...+....+-........... ....+...+..+...+ ....+ .-.+.+|+||++++.|++|.
T Consensus 264 liw~~fV~nyl~ge~pl~fdllyWn~dst~~-~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~~a~~~Dh 342 (445)
T COG3243 264 LIWNYFVNNYLDGEQPLPFDLLYWNADSTRL-PGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYNLAAEEDH 342 (445)
T ss_pred cchHHHHHHhcCCCCCCchhHHHhhCCCccC-chHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEEEeecccc
Confidence 0011111111122111112112111111111 1112222222221111 11111 11357899999999999999
Q ss_pred CCCcHHHHHHHHhCCC-ceEEEeCCCCCCCccChH-H--------HHHHHHHHHhccCCCCc
Q 021980 249 WVGSAKATRIKEFYPN-TTLVNFQAGHCPHDEVPE-L--------VNKALMDWLSTVKPQAS 300 (304)
Q Consensus 249 ~~~~~~~~~~~~~~~~-~~~~~~~~GH~~~~e~p~-~--------~~~~i~~fl~~~~~~~~ 300 (304)
+.|.++....++..++ .+++..++||...+=+|. . .-.....|+.+....+.
T Consensus 343 I~P~~Sv~~g~~l~~g~~~f~l~~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~~~~g 404 (445)
T COG3243 343 IAPWSSVYLGARLLGGEVTFVLSRSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAKEHPG 404 (445)
T ss_pred cCCHHHHHHHHHhcCCceEEEEecCceEEEEeCCcchhhhhcCCCCcchHHHHHHhhccCCC
Confidence 9999999999999988 555666899975433211 1 22356777776655554
No 100
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.25 E-value=7.7e-11 Score=94.53 Aligned_cols=102 Identities=26% Similarity=0.330 Sum_probs=67.7
Q ss_pred CCCcEEEEcccCCChhhHHhchHHHh---------ccCcEEEecCCCCCCCCcc-hhhhchhhHHHHHHHHHHHh-----
Q 021980 28 EGSPVVLIHGFGASAFHWRYNIPELA---------KRYKVYAVDLLGFGWSEKA-IIEYDAMVWKDQIVDFLKEI----- 92 (304)
Q Consensus 28 ~g~~iv~lHG~~~~~~~~~~~~~~l~---------~~~~vi~~D~~G~G~S~~~-~~~~~~~~~~~~l~~~~~~~----- 92 (304)
+|.||||+||.+++...|+.+...+. ..++++++|+......-.. ......+...+.+..+++..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~~ 82 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNRP 82 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhccC
Confidence 57899999999999888877765552 1378999998775432111 10111111223333333434
Q ss_pred cCCCeEEEEechhHHHHHHHHhcC---CcceeEEEEecCC
Q 021980 93 VKEPAVLVGNSLGGFAALVAAVGL---PDQVTGVALLNSA 129 (304)
Q Consensus 93 ~~~~~~lvGhS~Gg~va~~~a~~~---p~~v~~lvli~~~ 129 (304)
..++++||||||||.+|..+.... ++.|+.+|.++++
T Consensus 83 ~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTP 122 (225)
T ss_pred CCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCC
Confidence 356899999999999998887654 3579999998764
No 101
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.23 E-value=4e-11 Score=79.13 Aligned_cols=72 Identities=29% Similarity=0.372 Sum_probs=55.6
Q ss_pred CeeEEEEecCC----CCcEEEEcccCCChhhHHhchHHHhc-cCcEEEecCCCCCCCCcch-hhhchhhHHHHHHHHH
Q 021980 18 GHKIHYVVQGE----GSPVVLIHGFGASAFHWRYNIPELAK-RYKVYAVDLLGFGWSEKAI-IEYDAMVWKDQIVDFL 89 (304)
Q Consensus 18 g~~~~y~~~g~----g~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~~ 89 (304)
|.+++|+.+-+ +.+|+++||++..+..|..++..|++ +|.|+++|+||||+|+... .-.+.+.+.+|+.+++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 67888887753 34578899999999999999999965 6999999999999998532 1224455667776654
No 102
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.21 E-value=1.9e-09 Score=83.46 Aligned_cols=84 Identities=29% Similarity=0.396 Sum_probs=60.0
Q ss_pred EEEEcccCCChhhHHh--chHHHhc---cCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEechhH
Q 021980 32 VVLIHGFGASAFHWRY--NIPELAK---RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGG 106 (304)
Q Consensus 32 iv~lHG~~~~~~~~~~--~~~~l~~---~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~Gg 106 (304)
|+.|||+.+|..+.+. +...+++ ..++.++|++-+ + ....+.+.+.++....+.+.|+|.||||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~-----p------~~a~~~l~~~i~~~~~~~~~liGSSlGG 70 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF-----P------EEAIAQLEQLIEELKPENVVLIGSSLGG 70 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcC-----H------HHHHHHHHHHHHhCCCCCeEEEEEChHH
Confidence 7899999998877654 2344443 356777777621 1 1223566677777777779999999999
Q ss_pred HHHHHHHhcCCcceeEEEEecCC
Q 021980 107 FAALVAAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 107 ~va~~~a~~~p~~v~~lvli~~~ 129 (304)
..|..+|.+++ +.+ |++||+
T Consensus 71 ~~A~~La~~~~--~~a-vLiNPa 90 (187)
T PF05728_consen 71 FYATYLAERYG--LPA-VLINPA 90 (187)
T ss_pred HHHHHHHHHhC--CCE-EEEcCC
Confidence 99999999885 333 888875
No 103
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.20 E-value=2.6e-09 Score=88.77 Aligned_cols=234 Identities=18% Similarity=0.219 Sum_probs=126.2
Q ss_pred CCcEEEEcccCCChhhHHhc--h-HHHhccCcEEEecCCCCCCCCcchhhhch-h-------------hHHHHHHHHHHH
Q 021980 29 GSPVVLIHGFGASAFHWRYN--I-PELAKRYKVYAVDLLGFGWSEKAIIEYDA-M-------------VWKDQIVDFLKE 91 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~~~~~--~-~~l~~~~~vi~~D~~G~G~S~~~~~~~~~-~-------------~~~~~l~~~~~~ 91 (304)
+|.+|.|.|.|......+.. + +.+.+++..+.+..|=||.-.+.....+. . .-+..+...++.
T Consensus 92 rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~ 171 (348)
T PF09752_consen 92 RPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLER 171 (348)
T ss_pred CceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHHh
Confidence 45566788988865544432 2 44567899999999999976543221110 0 011233444555
Q ss_pred hcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCC---CCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhh
Q 021980 92 IVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG---QFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLF 168 (304)
Q Consensus 92 ~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (304)
.+..++.|.|.||||.+|...|..+|..+..+-++++.. .+..+....... -+. +.+.+...
T Consensus 172 ~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~-W~~--------L~~q~~~~------ 236 (348)
T PF09752_consen 172 EGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSIN-WDA--------LEKQFEDT------ 236 (348)
T ss_pred cCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCC-HHH--------HHHHhccc------
Confidence 577899999999999999999999999888777776432 122221111000 000 00000000
Q ss_pred hhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhh-ccCCCceEEEecCCC
Q 021980 169 WQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVL-SKLSCPLLLLWGDLD 247 (304)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~P~lii~G~~D 247 (304)
............... ... ........+ .+. .+.+...+.. -+++.... +.-.-.+.++.+++|
T Consensus 237 -------~~~~~~~~~~~~~~~--~~~-~~~~~~~~~---~Ea-~~~m~~~md~--~T~l~nf~~P~dp~~ii~V~A~~D 300 (348)
T PF09752_consen 237 -------VYEEEISDIPAQNKS--LPL-DSMEERRRD---REA-LRFMRGVMDS--FTHLTNFPVPVDPSAIIFVAAKND 300 (348)
T ss_pred -------chhhhhcccccCccc--ccc-hhhccccch---HHH-HHHHHHHHHh--hccccccCCCCCCCcEEEEEecCc
Confidence 000000000000000 000 000000111 111 1111111110 11111111 112335889999999
Q ss_pred CCCCcHHHHHHHHhCCCceEEEeCCCCC-CCccChHHHHHHHHHHHh
Q 021980 248 PWVGSAKATRIKEFYPNTTLVNFQAGHC-PHDEVPELVNKALMDWLS 293 (304)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~GH~-~~~e~p~~~~~~i~~fl~ 293 (304)
.++|......+.+.+|++++..+++||. ..+-+.+.|.+.|.+=+.
T Consensus 301 aYVPr~~v~~Lq~~WPGsEvR~l~gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 301 AYVPRHGVLSLQEIWPGSEVRYLPGGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred eEechhhcchHHHhCCCCeEEEecCCcEEEeeechHHHHHHHHHHhh
Confidence 9999988889999999999999999995 455667888888877553
No 104
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.17 E-value=1.5e-08 Score=89.99 Aligned_cols=118 Identities=19% Similarity=0.235 Sum_probs=77.0
Q ss_pred cEEEEc----CeeEEEEecC------CCCcEEEEcccCCChhhHHhch------------------HHHhccCcEEEecC
Q 021980 12 NFWTWR----GHKIHYVVQG------EGSPVVLIHGFGASAFHWRYNI------------------PELAKRYKVYAVDL 63 (304)
Q Consensus 12 ~~~~~~----g~~~~y~~~g------~g~~iv~lHG~~~~~~~~~~~~------------------~~l~~~~~vi~~D~ 63 (304)
.|++++ +.+++|.-.. +.|.+|+|+|.++++..+-... -.+.+...++.+|.
T Consensus 50 Gy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDq 129 (462)
T PTZ00472 50 GYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQ 129 (462)
T ss_pred EEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeC
Confidence 366674 4677776443 2467888999988776551110 01334478999997
Q ss_pred C-CCCCCCcchh--hhchhhHHHHHHHHHHHh-------cCCCeEEEEechhHHHHHHHHhcC----------CcceeEE
Q 021980 64 L-GFGWSEKAII--EYDAMVWKDQIVDFLKEI-------VKEPAVLVGNSLGGFAALVAAVGL----------PDQVTGV 123 (304)
Q Consensus 64 ~-G~G~S~~~~~--~~~~~~~~~~l~~~~~~~-------~~~~~~lvGhS~Gg~va~~~a~~~----------p~~v~~l 123 (304)
| |+|.|..... ..+....++++.++++.. ...+++|+|||+||.++-.+|... +=.++++
T Consensus 130 P~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi 209 (462)
T PTZ00472 130 PAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGL 209 (462)
T ss_pred CCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEE
Confidence 5 8888864322 233455677777777643 346899999999999888877642 1246788
Q ss_pred EEecCC
Q 021980 124 ALLNSA 129 (304)
Q Consensus 124 vli~~~ 129 (304)
++-++.
T Consensus 210 ~IGNg~ 215 (462)
T PTZ00472 210 AVGNGL 215 (462)
T ss_pred EEeccc
Confidence 877653
No 105
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.16 E-value=2.6e-09 Score=80.45 Aligned_cols=151 Identities=20% Similarity=0.221 Sum_probs=97.5
Q ss_pred hchHHHh-ccCcEEEecCCCCCCCCcchhh-hchhhHHHHHHHHHHHhcCC--CeEEEEechhHHHHHHHHhcCCcceeE
Q 021980 47 YNIPELA-KRYKVYAVDLLGFGWSEKAIIE-YDAMVWKDQIVDFLKEIVKE--PAVLVGNSLGGFAALVAAVGLPDQVTG 122 (304)
Q Consensus 47 ~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~~l~~~~~~~~~~--~~~lvGhS~Gg~va~~~a~~~p~~v~~ 122 (304)
.++..|. .+|.++.+|+||-|+|..+.+. .....-+..+.+++.....+ .+-|.|+|+||.|++.+|.+.|+-- .
T Consensus 51 ~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~~-~ 129 (210)
T COG2945 51 TLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEIL-V 129 (210)
T ss_pred HHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccccc-c
Confidence 3444554 4699999999999999875322 11111223344555544332 3468999999999999999987522 1
Q ss_pred EEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCC
Q 021980 123 VALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRP 202 (304)
Q Consensus 123 lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (304)
.+.+.+..
T Consensus 130 ~is~~p~~------------------------------------------------------------------------ 137 (210)
T COG2945 130 FISILPPI------------------------------------------------------------------------ 137 (210)
T ss_pred eeeccCCC------------------------------------------------------------------------
Confidence 12111100
Q ss_pred CCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCCCceEEEeCCCCCCCccChH
Q 021980 203 AADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLVNFQAGHCPHDEVPE 282 (304)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~e~p~ 282 (304)
. . ++ ...+....+|.++|+|+.|.+++....-++.+..+--.+.+.++.|+.+-. -+
T Consensus 138 -~---~-----------------~d-fs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~~~~~i~i~~a~HFF~gK-l~ 194 (210)
T COG2945 138 -N---A-----------------YD-FSFLAPCPSPGLVIQGDADDVVDLVAVLKWQESIKITVITIPGADHFFHGK-LI 194 (210)
T ss_pred -C---c-----------------hh-hhhccCCCCCceeEecChhhhhcHHHHHHhhcCCCCceEEecCCCceeccc-HH
Confidence 0 0 00 011234567999999999999998888888877544444444899998754 67
Q ss_pred HHHHHHHHHHh
Q 021980 283 LVNKALMDWLS 293 (304)
Q Consensus 283 ~~~~~i~~fl~ 293 (304)
.+.+.|.+||.
T Consensus 195 ~l~~~i~~~l~ 205 (210)
T COG2945 195 ELRDTIADFLE 205 (210)
T ss_pred HHHHHHHHHhh
Confidence 78889999984
No 106
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.12 E-value=3e-10 Score=87.75 Aligned_cols=229 Identities=20% Similarity=0.354 Sum_probs=120.0
Q ss_pred cEEEEcccCCChhhHHhchHHHh-ccCcEEEecCCCCCCCCcchh---hhchhhHHH-HHHHHHHH----hcCCCeEEEE
Q 021980 31 PVVLIHGFGASAFHWRYNIPELA-KRYKVYAVDLLGFGWSEKAII---EYDAMVWKD-QIVDFLKE----IVKEPAVLVG 101 (304)
Q Consensus 31 ~iv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~---~~~~~~~~~-~l~~~~~~----~~~~~~~lvG 101 (304)
-++.--+.+.....|+..+...+ .+|.|..+|+||.|.|+.... .+...+|+. |+-..++. +...+...||
T Consensus 32 ~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vg 111 (281)
T COG4757 32 RLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVG 111 (281)
T ss_pred cEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEee
Confidence 35555566777778888887775 469999999999999976432 244444442 23223322 3345789999
Q ss_pred echhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHh
Q 021980 102 NSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVL 181 (304)
Q Consensus 102 hS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (304)
|||||-+.- +..++| +..+..+.++.+.....+. ....+.-. ..++-...-+..|+...|..+..
T Consensus 112 HS~GGqa~g-L~~~~~-k~~a~~vfG~gagwsg~m~-----~~~~l~~~------~l~~lv~p~lt~w~g~~p~~l~G-- 176 (281)
T COG4757 112 HSFGGQALG-LLGQHP-KYAAFAVFGSGAGWSGWMG-----LRERLGAV------LLWNLVGPPLTFWKGYMPKDLLG-- 176 (281)
T ss_pred ccccceeec-ccccCc-ccceeeEeccccccccchh-----hhhcccce------eeccccccchhhccccCcHhhcC--
Confidence 999996543 344455 4444444443322111000 00000000 00000000011121111111100
Q ss_pred HhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHH--HHHhhcccc-chhhhhccCCCceEEEecCCCCCCCcHHHHHH
Q 021980 182 KSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMT--RFMLNQSKY-TLDSVLSKLSCPLLLLWGDLDPWVGSAKATRI 258 (304)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~ 258 (304)
-.+..+.- .-..+.+..+ .+....... ...+..+.+++|+.++...+|+++|+.+.+.+
T Consensus 177 -----~G~d~p~~-------------v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f 238 (281)
T COG4757 177 -----LGSDLPGT-------------VMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAF 238 (281)
T ss_pred -----CCccCcch-------------HHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHH
Confidence 00000000 0001111110 011111111 13456688999999999999999999999999
Q ss_pred HHhCCCceEEE--e-C----CCCCCCccCh-HHHHHHHHHHH
Q 021980 259 KEFYPNTTLVN--F-Q----AGHCPHDEVP-ELVNKALMDWL 292 (304)
Q Consensus 259 ~~~~~~~~~~~--~-~----~GH~~~~e~p-~~~~~~i~~fl 292 (304)
....+++.+.. + + -||+-..-+| |.+-+.+.+|+
T Consensus 239 ~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 239 ASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 99999876543 3 2 2899888887 66666666654
No 107
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.10 E-value=2.2e-09 Score=79.79 Aligned_cols=171 Identities=20% Similarity=0.235 Sum_probs=106.7
Q ss_pred CcEEEEcccCCChh-hHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEechhHHH
Q 021980 30 SPVVLIHGFGASAF-HWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFA 108 (304)
Q Consensus 30 ~~iv~lHG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~Gg~v 108 (304)
..++.+||+.+|+. .|....+.-... +-.+++.. ......++|.+.+.+.+... .++++||+||+|+..
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~--a~rveq~~-------w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~ 72 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN--ARRVEQDD-------WEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLGCAT 72 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc--chhcccCC-------CCCCCHHHHHHHHHHHHhcc-CCCeEEEEecccHHH
Confidence 35788999977664 576654432111 22222221 11234556777777777665 566999999999999
Q ss_pred HHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhHhhhcCC
Q 021980 109 ALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLKSVYINS 188 (304)
Q Consensus 109 a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (304)
++.++.+....|.++.++.++..-.+. ....
T Consensus 73 v~h~~~~~~~~V~GalLVAppd~~~~~----------~~~~--------------------------------------- 103 (181)
T COG3545 73 VAHWAEHIQRQVAGALLVAPPDVSRPE----------IRPK--------------------------------------- 103 (181)
T ss_pred HHHHHHhhhhccceEEEecCCCccccc----------cchh---------------------------------------
Confidence 999999887799999999864210000 0000
Q ss_pred CCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCCCceEE
Q 021980 189 SNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLV 268 (304)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~ 268 (304)
.. . .++... ......|.+++..++|++++++.++.+++.++..-+.
T Consensus 104 ---------~~----~--------------------tf~~~p-~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs~lv~ 149 (181)
T COG3545 104 ---------HL----M--------------------TFDPIP-REPLPFPSVVVASRNDPYVSYEHAEDLANAWGSALVD 149 (181)
T ss_pred ---------hc----c--------------------ccCCCc-cccCCCceeEEEecCCCCCCHHHHHHHHHhccHhhee
Confidence 00 0 000000 1234569999999999999999999999999665444
Q ss_pred EeCCCCCC----CccChHHHHHHHHHHHhc
Q 021980 269 NFQAGHCP----HDEVPELVNKALMDWLST 294 (304)
Q Consensus 269 ~~~~GH~~----~~e~p~~~~~~i~~fl~~ 294 (304)
.-++||.- +-+-|+.. .++.+|+.+
T Consensus 150 ~g~~GHiN~~sG~g~wpeg~-~~l~~~~s~ 178 (181)
T COG3545 150 VGEGGHINAESGFGPWPEGY-ALLAQLLSR 178 (181)
T ss_pred cccccccchhhcCCCcHHHH-HHHHHHhhh
Confidence 44788854 33445544 456666544
No 108
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.10 E-value=2.8e-09 Score=84.50 Aligned_cols=223 Identities=19% Similarity=0.246 Sum_probs=130.9
Q ss_pred cEEEEcCeeEEEEec------CCCCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCc----ch-h------
Q 021980 12 NFWTWRGHKIHYVVQ------GEGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEK----AI-I------ 74 (304)
Q Consensus 12 ~~~~~~g~~~~y~~~------g~g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~----~~-~------ 74 (304)
.|...+|.+|+-... |.-|-||-.||.++....|..++..-..+|.|+..|-||.|.|.. +. .
T Consensus 60 Tf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~ 139 (321)
T COG3458 60 TFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGF 139 (321)
T ss_pred EEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccccccceeEEEEecccCCCccccCCCCCCCCcCCce
Confidence 466788888874432 233567789999999888877666556789999999999998732 00 0
Q ss_pred ----------hhchhhHHHHHHHHHHH------hcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCC
Q 021980 75 ----------EYDAMVWKDQIVDFLKE------IVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKG 138 (304)
Q Consensus 75 ----------~~~~~~~~~~l~~~~~~------~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~ 138 (304)
.|.....-.|+..+++. .+-+++.+.|.|.||.+++..++..| +|++++++-|..+-...
T Consensus 140 mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r--- 215 (321)
T COG3458 140 MTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPR--- 215 (321)
T ss_pred eEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchh---
Confidence 11111111233333333 23468999999999999999888766 78888876553321000
Q ss_pred CCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHH
Q 021980 139 SNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTR 218 (304)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (304)
+++-....+. ..+...++ . .++. ....++.+.
T Consensus 216 -------~i~~~~~~~y-------------------dei~~y~k------------------~--h~~~-e~~v~~TL~- 247 (321)
T COG3458 216 -------AIELATEGPY-------------------DEIQTYFK------------------R--HDPK-EAEVFETLS- 247 (321)
T ss_pred -------heeecccCcH-------------------HHHHHHHH------------------h--cCch-HHHHHHHHh-
Confidence 0000000000 01111111 0 0111 111111111
Q ss_pred HHhhccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCCCceEE-EeC-CCCCCCccChHHHHHHHHHHHhcc
Q 021980 219 FMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLV-NFQ-AGHCPHDEVPELVNKALMDWLSTV 295 (304)
Q Consensus 219 ~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-~~~-~GH~~~~e~p~~~~~~i~~fl~~~ 295 (304)
-++.....+++++|+|+..|--|+++|+...-.+....+..+.+ +++ -+|. +-|.-.++.+..|++..
T Consensus 248 ------yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe---~~p~~~~~~~~~~l~~l 317 (321)
T COG3458 248 ------YFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHE---GGPGFQSRQQVHFLKIL 317 (321)
T ss_pred ------hhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccc---cCcchhHHHHHHHHHhh
Confidence 12333345779999999999999999998887777776665443 333 4464 55666667777787654
No 109
>PRK10115 protease 2; Provisional
Probab=99.09 E-value=1.7e-08 Score=94.10 Aligned_cols=114 Identities=17% Similarity=0.134 Sum_probs=76.5
Q ss_pred cEEEEcCeeEEE-Ee-------cCCCCcEEEEcccCCChhh--HHhchH-HHhccCcEEEecCCCCCCCCcc--------
Q 021980 12 NFWTWRGHKIHY-VV-------QGEGSPVVLIHGFGASAFH--WRYNIP-ELAKRYKVYAVDLLGFGWSEKA-------- 72 (304)
Q Consensus 12 ~~~~~~g~~~~y-~~-------~g~g~~iv~lHG~~~~~~~--~~~~~~-~l~~~~~vi~~D~~G~G~S~~~-------- 72 (304)
.+.+.||.+|.+ .. .|+.|.||++||..+.+.. |..... .++++|.|+.++.||-|.=...
T Consensus 420 ~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~ 499 (686)
T PRK10115 420 WITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFL 499 (686)
T ss_pred EEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhh
Confidence 355688999885 22 2334678889997666532 433333 3467899999999997643211
Q ss_pred hhhhchhhHHHHHHHHHHHh---c---CCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCC
Q 021980 73 IIEYDAMVWKDQIVDFLKEI---V---KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 73 ~~~~~~~~~~~~l~~~~~~~---~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~ 129 (304)
....+. +|+.+.++.+ + .+++.+.|.|.||.++...+.++|++++++|+..+.
T Consensus 500 ~k~~~~----~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~ 558 (686)
T PRK10115 500 KKKNTF----NDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPF 558 (686)
T ss_pred cCCCcH----HHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCc
Confidence 011122 3333333333 2 357999999999999999999999999999987653
No 110
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.09 E-value=1.5e-09 Score=86.66 Aligned_cols=48 Identities=23% Similarity=0.441 Sum_probs=33.8
Q ss_pred ccCCCceEEEecCCCCCCCcHHHHHHHHhCCC-ceEEEeCCCCCCCccC
Q 021980 233 SKLSCPLLLLWGDLDPWVGSAKATRIKEFYPN-TTLVNFQAGHCPHDEV 280 (304)
Q Consensus 233 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~GH~~~~e~ 280 (304)
..|++|+|-|+|++|.+++++.++.+.+...+ .+++..++||.++...
T Consensus 158 ~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~gGH~vP~~~ 206 (212)
T PF03959_consen 158 PKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHDGGHHVPRKK 206 (212)
T ss_dssp TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEESSSSS----H
T ss_pred ccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEECCCCcCcCCh
Confidence 45799999999999999999888988888877 7777779999887653
No 111
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.08 E-value=1.6e-08 Score=84.18 Aligned_cols=114 Identities=18% Similarity=0.204 Sum_probs=68.9
Q ss_pred cCeeEEEEec-----CCC--CcEEEEcccCCCh-hhHH--hchH--------HHhccCcEEEecCCCCCCCCcchhhhch
Q 021980 17 RGHKIHYVVQ-----GEG--SPVVLIHGFGASA-FHWR--YNIP--------ELAKRYKVYAVDLLGFGWSEKAIIEYDA 78 (304)
Q Consensus 17 ~g~~~~y~~~-----g~g--~~iv~lHG~~~~~-~~~~--~~~~--------~l~~~~~vi~~D~~G~G~S~~~~~~~~~ 78 (304)
||++|+.... +.+ |+||..|+++.+. .... ...+ ....+|.||..|.||.|.|+.......
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~- 79 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMS- 79 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTS-
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCC-
Confidence 5666664322 222 5677788888643 1121 1111 335679999999999999987533211
Q ss_pred hhHHHH---HHHHHHHhcC--CCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCC
Q 021980 79 MVWKDQ---IVDFLKEIVK--EPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQ 131 (304)
Q Consensus 79 ~~~~~~---l~~~~~~~~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~ 131 (304)
...++| +++++..... .+|-++|.|++|..++..|...|..+++++...+...
T Consensus 80 ~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 80 PNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSD 137 (272)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SB
T ss_pred hhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCc
Confidence 122333 4444444322 4799999999999999999988889999998876543
No 112
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.04 E-value=1.4e-09 Score=95.13 Aligned_cols=120 Identities=13% Similarity=0.044 Sum_probs=80.5
Q ss_pred CccEEEE-cCeeEEEEec-CCCCcEEEE-ccc---CCChhhHHhchHHHhccCcEEEecCCCCCCCCcchh--hhchhhH
Q 021980 10 GYNFWTW-RGHKIHYVVQ-GEGSPVVLI-HGF---GASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAII--EYDAMVW 81 (304)
Q Consensus 10 ~~~~~~~-~g~~~~y~~~-g~g~~iv~l-HG~---~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~--~~~~~~~ 81 (304)
..++... +|+++.+... |.-..+-.+ +.. ..+...|..+++.|.+...+...|++|+|.+.+... +.....+
T Consensus 69 t~~~~~~~~gv~i~vp~~~~g~~~i~~ldp~~~~~~~~~~~~~~li~~L~~~GY~~~~dL~g~gYDwR~~~~~~~~~~~L 148 (440)
T PLN02733 69 TGKTVSLDPKTEIVVPDDRYGLYAIDILDPDVIIRLDEVYYFHDMIEQLIKWGYKEGKTLFGFGYDFRQSNRLPETMDGL 148 (440)
T ss_pred cCceecCCCCceEEcCCCCCCceeeEEecCccccCcchHHHHHHHHHHHHHcCCccCCCcccCCCCccccccHHHHHHHH
Confidence 3356667 5888877642 221222222 211 345678999999998765566899999998765421 1122333
Q ss_pred HHHHHHHHHHhcCCCeEEEEechhHHHHHHHHhcCCcc----eeEEEEecCC
Q 021980 82 KDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQ----VTGVALLNSA 129 (304)
Q Consensus 82 ~~~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~----v~~lvli~~~ 129 (304)
.+.+.++.+..+.++++|+||||||.++..++..+|+. |+++|.++++
T Consensus 149 k~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P 200 (440)
T PLN02733 149 KKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAP 200 (440)
T ss_pred HHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCC
Confidence 34444444455678999999999999999999988864 7888998763
No 113
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=99.02 E-value=1.3e-08 Score=81.10 Aligned_cols=94 Identities=24% Similarity=0.218 Sum_probs=68.9
Q ss_pred EEcccC--CChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHH-hcCCCeEEEEechhHHHHH
Q 021980 34 LIHGFG--ASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKE-IVKEPAVLVGNSLGGFAAL 110 (304)
Q Consensus 34 ~lHG~~--~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~lvGhS~Gg~va~ 110 (304)
++|+.+ ++...|..+...+...+.|+++|.+|+|.+.... .+...+++.+.+.+.. ....+++++|||+||.++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~ 79 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGRRDVSALPLPGFGPGEPLP--ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAH 79 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCCccEEEecCCCCCCCCCCC--CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHH
Confidence 455433 6777899999999888999999999998765432 2333344444444433 3356899999999999999
Q ss_pred HHHhc---CCcceeEEEEecCC
Q 021980 111 VAAVG---LPDQVTGVALLNSA 129 (304)
Q Consensus 111 ~~a~~---~p~~v~~lvli~~~ 129 (304)
.++.+ .++.+.+++++++.
T Consensus 80 ~~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 80 AVAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred HHHHHHHhCCCCCcEEEEEccC
Confidence 99986 45678899888764
No 114
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.02 E-value=2.2e-08 Score=93.96 Aligned_cols=80 Identities=14% Similarity=0.066 Sum_probs=57.4
Q ss_pred HHH-hccCcEEEecCCCCCCCCcchhhhchhh--HHHHHHHHHHHh-----c------------CCCeEEEEechhHHHH
Q 021980 50 PEL-AKRYKVYAVDLLGFGWSEKAIIEYDAMV--WKDQIVDFLKEI-----V------------KEPAVLVGNSLGGFAA 109 (304)
Q Consensus 50 ~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~--~~~~l~~~~~~~-----~------------~~~~~lvGhS~Gg~va 109 (304)
+.+ ..+|.|+..|.||+|.|+.....+.... -..++.+++..- + ..+|.++|.|+||.++
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~ 352 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLP 352 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHH
Confidence 344 4579999999999999987532221111 112344555421 0 3589999999999999
Q ss_pred HHHHhcCCcceeEEEEecCC
Q 021980 110 LVAAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 110 ~~~a~~~p~~v~~lvli~~~ 129 (304)
+..|...|+.++++|.+++.
T Consensus 353 ~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 353 NAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred HHHHhhCCCcceEEEeeCCC
Confidence 99999999999999987654
No 115
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.01 E-value=4.3e-08 Score=71.55 Aligned_cols=102 Identities=21% Similarity=0.244 Sum_probs=68.3
Q ss_pred cCCCC-cEEEEcccCCCh--hhHHhchHHHh-ccCcEEEecCCCCCCC-----Ccchhh-hchhhHHHHHHHHHHHhcCC
Q 021980 26 QGEGS-PVVLIHGFGASA--FHWRYNIPELA-KRYKVYAVDLLGFGWS-----EKAIIE-YDAMVWKDQIVDFLKEIVKE 95 (304)
Q Consensus 26 ~g~g~-~iv~lHG~~~~~--~~~~~~~~~l~-~~~~vi~~D~~G~G~S-----~~~~~~-~~~~~~~~~l~~~~~~~~~~ 95 (304)
.|+.+ +||+.||-|++. .....+...|+ .++.|..++++=.-.. .++..+ .-...|...+.++...+.-.
T Consensus 10 ag~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~g 89 (213)
T COG3571 10 AGPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEG 89 (213)
T ss_pred CCCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCC
Confidence 34433 577889987754 45667777776 4699999988754321 122111 11223555566666666667
Q ss_pred CeEEEEechhHHHHHHHHhcCCcceeEEEEec
Q 021980 96 PAVLVGNSLGGFAALVAAVGLPDQVTGVALLN 127 (304)
Q Consensus 96 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~ 127 (304)
+.++-||||||.++..++..--..|+.|+|++
T Consensus 90 pLi~GGkSmGGR~aSmvade~~A~i~~L~clg 121 (213)
T COG3571 90 PLIIGGKSMGGRVASMVADELQAPIDGLVCLG 121 (213)
T ss_pred ceeeccccccchHHHHHHHhhcCCcceEEEec
Confidence 89999999999999988876555599999875
No 116
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.01 E-value=3e-08 Score=80.56 Aligned_cols=101 Identities=23% Similarity=0.293 Sum_probs=60.4
Q ss_pred CCcEEEEcccCCChhhHHhchHHHh-cc---CcEEE--ecCCCC----CC----CCcch------hhh--chhhHHHHHH
Q 021980 29 GSPVVLIHGFGASAFHWRYNIPELA-KR---YKVYA--VDLLGF----GW----SEKAI------IEY--DAMVWKDQIV 86 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~~~~~~~~l~-~~---~~vi~--~D~~G~----G~----S~~~~------~~~--~~~~~~~~l~ 86 (304)
..|.||+||++++...+..++..+. +. -.++. ++--|+ |. ...|. ... +....+..+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 4689999999999999999999996 43 33333 333332 11 11221 111 2223344444
Q ss_pred HHHHH----hcCCCeEEEEechhHHHHHHHHhcCCc-----ceeEEEEecCC
Q 021980 87 DFLKE----IVKEPAVLVGNSLGGFAALVAAVGLPD-----QVTGVALLNSA 129 (304)
Q Consensus 87 ~~~~~----~~~~~~~lvGhS~Gg~va~~~a~~~p~-----~v~~lvli~~~ 129 (304)
..+.. ...+++.+|||||||+.++.|+..+-. .+.++|.|+++
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~p 142 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGP 142 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccc
Confidence 44433 357899999999999999999987532 68999999763
No 117
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.99 E-value=4.8e-08 Score=79.07 Aligned_cols=97 Identities=28% Similarity=0.258 Sum_probs=67.7
Q ss_pred CcEEEEcccCCChhhHHhchHHHh-ccCcEEEecCCCC-CCCCcc---hhh--------hchhhHHHHHHHHHHHhc---
Q 021980 30 SPVVLIHGFGASAFHWRYNIPELA-KRYKVYAVDLLGF-GWSEKA---IIE--------YDAMVWKDQIVDFLKEIV--- 93 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~-G~S~~~---~~~--------~~~~~~~~~l~~~~~~~~--- 93 (304)
|.||++|++.+-....+.+...|+ .+|.++++|+-+. |.+... ... .+......++...++.+.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 678899998887778888899996 4699999998774 433211 101 111233345555554442
Q ss_pred ---CCCeEEEEechhHHHHHHHHhcCCcceeEEEEec
Q 021980 94 ---KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLN 127 (304)
Q Consensus 94 ---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~ 127 (304)
.+++.++|.||||.+++.++.+.| .+++.++.-
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fy 143 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFY 143 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEec
Confidence 457999999999999999999988 677766543
No 118
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.99 E-value=3.4e-08 Score=81.03 Aligned_cols=108 Identities=19% Similarity=0.267 Sum_probs=59.7
Q ss_pred eeEEEEecC--CCCcEEEEcccCCChhh---HHhchHHHhc-cCcEEEec----CCCCCCCCcchhhhchhhHHHHHHHH
Q 021980 19 HKIHYVVQG--EGSPVVLIHGFGASAFH---WRYNIPELAK-RYKVYAVD----LLGFGWSEKAIIEYDAMVWKDQIVDF 88 (304)
Q Consensus 19 ~~~~y~~~g--~g~~iv~lHG~~~~~~~---~~~~~~~l~~-~~~vi~~D----~~G~G~S~~~~~~~~~~~~~~~l~~~ 88 (304)
..+.|...+ ....|||+-|++..-.. ...++..|.+ +|.|+-+- +.|+|-++-.. +.++. +++.++
T Consensus 21 ~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~---D~~eI-~~~v~y 96 (303)
T PF08538_consen 21 VAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDR---DVEEI-AQLVEY 96 (303)
T ss_dssp EEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHH---HHHHH-HHHHHH
T ss_pred eEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhh---HHHHH-HHHHHH
Confidence 334444443 23469999998775443 3456667754 68888876 55677655322 22222 333444
Q ss_pred HHHh-----cCCCeEEEEechhHHHHHHHHhcC-----CcceeEEEEecCCC
Q 021980 89 LKEI-----VKEPAVLVGNSLGGFAALVAAVGL-----PDQVTGVALLNSAG 130 (304)
Q Consensus 89 ~~~~-----~~~~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lvli~~~~ 130 (304)
+... ..++++|+|||-|+--++.|..+. ...|.+.|+-.|..
T Consensus 97 lr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVS 148 (303)
T PF08538_consen 97 LRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVS 148 (303)
T ss_dssp HHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE--
T ss_pred HHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCC
Confidence 4444 457899999999999999998764 36799999988754
No 119
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.96 E-value=5.1e-08 Score=76.34 Aligned_cols=218 Identities=17% Similarity=0.186 Sum_probs=102.5
Q ss_pred cCeeEEEEecCC-------CCcEEEEcccCCChhhHHhchHHHhc-cCcEEEecCCCC-CCCCcchhhhchhhHHHHH--
Q 021980 17 RGHKIHYVVQGE-------GSPVVLIHGFGASAFHWRYNIPELAK-RYKVYAVDLLGF-GWSEKAIIEYDAMVWKDQI-- 85 (304)
Q Consensus 17 ~g~~~~y~~~g~-------g~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~l-- 85 (304)
+|..|+....-+ +++||+..|++.....+..++.+|+. +|+|+.+|...| |.|+....++++..-.+++
T Consensus 11 ~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~ 90 (294)
T PF02273_consen 11 DGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLT 90 (294)
T ss_dssp TTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-------------HHHHHHHHHH
T ss_pred CCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHHhHHHHHH
Confidence 577787665432 36789999999999999999999964 699999998888 8999887777776544444
Q ss_pred -HHHHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHh
Q 021980 86 -VDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVL 164 (304)
Q Consensus 86 -~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (304)
.++++..+..++-|+.-|+.|.+|+..|+.. .+.-+|...+ .. + + ...+.+.++.-+.
T Consensus 91 V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVG--VV-n------------l----r~TLe~al~~Dyl 149 (294)
T PF02273_consen 91 VIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVG--VV-N------------L----RDTLEKALGYDYL 149 (294)
T ss_dssp HHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES----S--------------H----HHHHHHHHSS-GG
T ss_pred HHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEee--ee-e------------H----HHHHHHHhccchh
Confidence 4556666788899999999999999999854 3555554432 10 0 0 0111111110000
Q ss_pred hhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEec
Q 021980 165 GFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWG 244 (304)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 244 (304)
+.. ... +. .. .++ ....-..+.|.+.+.+.-- ..--......+.+.+|++.+++
T Consensus 150 ~~~------i~~----lp----~d---ldf--------eGh~l~~~vFv~dc~e~~w-~~l~ST~~~~k~l~iP~iaF~A 203 (294)
T PF02273_consen 150 QLP------IEQ----LP----ED---LDF--------EGHNLGAEVFVTDCFEHGW-DDLDSTINDMKRLSIPFIAFTA 203 (294)
T ss_dssp GS-------GGG----------SE---EEE--------TTEEEEHHHHHHHHHHTT--SSHHHHHHHHTT--S-EEEEEE
T ss_pred hcc------hhh----CC----Cc---ccc--------cccccchHHHHHHHHHcCC-ccchhHHHHHhhCCCCEEEEEe
Confidence 000 000 00 00 000 0001112223222211100 0001123446788999999999
Q ss_pred CCCCCCCcHHHHHHHHhC--CCceEEEe-CCCCCCCccChH
Q 021980 245 DLDPWVGSAKATRIKEFY--PNTTLVNF-QAGHCPHDEVPE 282 (304)
Q Consensus 245 ~~D~~~~~~~~~~~~~~~--~~~~~~~~-~~GH~~~~e~p~ 282 (304)
++|.|+.......+...+ +.++++.+ +++|-.. |+|-
T Consensus 204 ~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~-enl~ 243 (294)
T PF02273_consen 204 NDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG-ENLV 243 (294)
T ss_dssp TT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT-SSHH
T ss_pred CCCccccHHHHHHHHHhcCCCceeEEEecCccchhh-hChH
Confidence 999999988888877754 34677776 6889754 5553
No 120
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.95 E-value=2.2e-09 Score=84.98 Aligned_cols=85 Identities=28% Similarity=0.338 Sum_probs=51.0
Q ss_pred CcEEEEcccCC-ChhhHHhchHHHh-ccCc---EEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHh----cCCCeEEE
Q 021980 30 SPVVLIHGFGA-SAFHWRYNIPELA-KRYK---VYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI----VKEPAVLV 100 (304)
Q Consensus 30 ~~iv~lHG~~~-~~~~~~~~~~~l~-~~~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~lv 100 (304)
.||||+||.++ ....|..+.+.|. ++|. |+++++-....+............+.++.+|++.+ +. +|.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 58999999988 6678999999996 4577 89998744333222111111223345666666554 56 99999
Q ss_pred EechhHHHHHHHHhc
Q 021980 101 GNSLGGFAALVAAVG 115 (304)
Q Consensus 101 GhS~Gg~va~~~a~~ 115 (304)
||||||+++-.+...
T Consensus 81 gHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 81 GHSMGGTIARYYIKG 95 (219)
T ss_dssp EETCHHHHHHHHHHH
T ss_pred EcCCcCHHHHHHHHH
Confidence 999999999888864
No 121
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.91 E-value=9.6e-08 Score=73.86 Aligned_cols=60 Identities=22% Similarity=0.457 Sum_probs=50.7
Q ss_pred ccCCCceEEEecCCCCCCCcHHHHHHHHhCCCceEEEeCCCCCCCccChHHHHHHHHHHHhc
Q 021980 233 SKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLVNFQAGHCPHDEVPELVNKALMDWLST 294 (304)
Q Consensus 233 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~ 294 (304)
+.+++|+|-|.|+.|.+++...++.+.+.++++.+..-++||+++-. +.+.+-|.+||..
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~HpggH~VP~~--~~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEHPGGHIVPNK--AKYKEKIADFIQS 219 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhcCCCeEEecCCCccCCCc--hHHHHHHHHHHHH
Confidence 56899999999999999999999999999999966666999998844 4666777777754
No 122
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.89 E-value=4.9e-08 Score=77.48 Aligned_cols=100 Identities=23% Similarity=0.202 Sum_probs=62.3
Q ss_pred CcEEEEcccCCChhhHHh--chHHHhcc--CcEEEecCCCCCCC-------Cc-chh-hhchhhHHHHHHHHHHHh--cC
Q 021980 30 SPVVLIHGFGASAFHWRY--NIPELAKR--YKVYAVDLLGFGWS-------EK-AII-EYDAMVWKDQIVDFLKEI--VK 94 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~~~~--~~~~l~~~--~~vi~~D~~G~G~S-------~~-~~~-~~~~~~~~~~l~~~~~~~--~~ 94 (304)
|-||+|||.+.+...+.. -...+++. |-|+.|+....... +. ... .-+....++.+.++.... +.
T Consensus 17 PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD~ 96 (220)
T PF10503_consen 17 PLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNIDP 96 (220)
T ss_pred CEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccCC
Confidence 456789999998877654 23456554 66777775321110 10 000 011111222222233333 34
Q ss_pred CCeEEEEechhHHHHHHHHhcCCcceeEEEEecCC
Q 021980 95 EPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 95 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~ 129 (304)
+++++.|+|.||+.+..++..|||.+.++.++++.
T Consensus 97 ~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~ 131 (220)
T PF10503_consen 97 SRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGV 131 (220)
T ss_pred CceeeEEECHHHHHHHHHHHhCCccceEEEeeccc
Confidence 58999999999999999999999999998887654
No 123
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.88 E-value=1.1e-08 Score=82.30 Aligned_cols=103 Identities=23% Similarity=0.222 Sum_probs=70.5
Q ss_pred CCCcEEEEcccCCChhhHHhchHHHhc-cCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHH-------hcCCCeEE
Q 021980 28 EGSPVVLIHGFGASAFHWRYNIPELAK-RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKE-------IVKEPAVL 99 (304)
Q Consensus 28 ~g~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~l 99 (304)
.=|.+||+||+......|..++.+++. +|-||++|+...+..............++.+.+-++. .+..++.|
T Consensus 16 ~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l 95 (259)
T PF12740_consen 16 TYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLAL 95 (259)
T ss_pred CcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccccccccceEE
Confidence 336788999999888888999999976 5999999966654422211111111111221111111 13458999
Q ss_pred EEechhHHHHHHHHhcC-----CcceeEEEEecCCC
Q 021980 100 VGNSLGGFAALVAAVGL-----PDQVTGVALLNSAG 130 (304)
Q Consensus 100 vGhS~Gg~va~~~a~~~-----p~~v~~lvli~~~~ 130 (304)
.|||-||-+|+.++..+ +.+++++++++|..
T Consensus 96 ~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 96 AGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred eeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 99999999999999987 56899999999853
No 124
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.82 E-value=5.6e-08 Score=74.04 Aligned_cols=97 Identities=26% Similarity=0.253 Sum_probs=64.7
Q ss_pred EEEEcccCCChhhHHhchHHHh-ccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEechhHHHHH
Q 021980 32 VVLIHGFGASAFHWRYNIPELA-KRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAAL 110 (304)
Q Consensus 32 iv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~Gg~va~ 110 (304)
+||+-|=|+....=+.+...|+ +++.|+.+|-+=|=.+.+.+.+. ..+.++.+..+.+.-+.++++|+|.|+|+-|.-
T Consensus 5 ~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP~~~-a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP 83 (192)
T PF06057_consen 5 AVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSERTPEQT-AADLARIIRHYRARWGRKRVVLIGYSFGADVLP 83 (192)
T ss_pred EEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhCCHHHH-HHHHHHHHHHHHHHhCCceEEEEeecCCchhHH
Confidence 5677776665543356677785 46999999988777776554321 222233333344455678999999999997766
Q ss_pred HHHhcCC----cceeEEEEecCC
Q 021980 111 VAAVGLP----DQVTGVALLNSA 129 (304)
Q Consensus 111 ~~a~~~p----~~v~~lvli~~~ 129 (304)
....+.| ++|..++++++.
T Consensus 84 ~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 84 FIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred HHHhhCCHHHHhheeEEEEeccC
Confidence 6666555 578888888763
No 125
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.77 E-value=2.3e-06 Score=67.39 Aligned_cols=267 Identities=16% Similarity=0.172 Sum_probs=140.6
Q ss_pred cEEEEcCeeEEEEecC--------CCCcEEEEcccCCChhhHHhchHHHh----ccCcEEEecCCCCCCCC---cc---h
Q 021980 12 NFWTWRGHKIHYVVQG--------EGSPVVLIHGFGASAFHWRYNIPELA----KRYKVYAVDLLGFGWSE---KA---I 73 (304)
Q Consensus 12 ~~~~~~g~~~~y~~~g--------~g~~iv~lHG~~~~~~~~~~~~~~l~----~~~~vi~~D~~G~G~S~---~~---~ 73 (304)
.+++.+|..++-...| +.+-++++.|.++....|......|- ++..++.+...||-.-+ +. .
T Consensus 4 ~~~~~~gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~ 83 (301)
T KOG3975|consen 4 KEYTKSGLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSH 83 (301)
T ss_pred eeeeecCCcccceeeeeeeccCCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCccccccccc
Confidence 4566666666544433 23446778999999988887776653 34669999999997543 11 1
Q ss_pred ---hhhchhhHHHHHHHHHHHhcC--CCeEEEEechhHHHHHHHHhcC--CcceeEEEEecCCCCC-CCCCCCCC-chhh
Q 021980 74 ---IEYDAMVWKDQIVDFLKEIVK--EPAVLVGNSLGGFAALVAAVGL--PDQVTGVALLNSAGQF-GDGRKGSN-QSEE 144 (304)
Q Consensus 74 ---~~~~~~~~~~~l~~~~~~~~~--~~~~lvGhS~Gg~va~~~a~~~--p~~v~~lvli~~~~~~-~~~~~~~~-~~~~ 144 (304)
.-++.++..+.=.+++++... .+++++|||.|+...+++.... --.|.+.+++-|+-.- .+...+.. ....
T Consensus 84 ~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l 163 (301)
T KOG3975|consen 84 TNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVL 163 (301)
T ss_pred ccccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeee
Confidence 224445555555677777654 4799999999999999988732 3357788877654210 00000000 0000
Q ss_pred hHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHH-HhhhCCCCCCchHHHHHHHHHHHHhhc
Q 021980 145 STLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLV-ESITRPAADPNAAEVYYRLMTRFMLNQ 223 (304)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (304)
..+ .-.+ ...++.+|.. .|..+...+-....-..+.+..+. ..+.. ..+...+...-+..+.+..
T Consensus 164 ~~~--------~hv~--~lt~yi~~~~-lp~~ir~~Li~~~l~~~n~p~e~l~tal~l--~h~~v~rn~v~la~qEm~e- 229 (301)
T KOG3975|consen 164 RYL--------PHVV--SLTSYIYWIL-LPGFIRFILIKFMLCGSNGPQEFLSTALFL--THPQVVRNSVGLAAQEMEE- 229 (301)
T ss_pred eee--------hhhh--heeeeeeeec-ChHHHHHHHHHHhcccCCCcHHHHhhHHHh--hcHHHHHHHhhhchHHHHH-
Confidence 000 0000 0000011111 111111111111111111111111 11100 0000000000000000000
Q ss_pred cccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHHhCCCceEEEe--CCCCCCCccChHHHHHHHHHHH
Q 021980 224 SKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLVNF--QAGHCPHDEVPELVNKALMDWL 292 (304)
Q Consensus 224 ~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~--~~GH~~~~e~p~~~~~~i~~fl 292 (304)
......+.+++=.+-+-+.+|..|.|+|.+....+.+..|..++..- +.-|..-....+..++.+.+.+
T Consensus 230 V~~~d~e~~een~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Ldedki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 230 VTTRDIEYCEENLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDEDKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred HHHhHHHHHHhcCcEEEEEccCCCCCcchHHHHHHhhhcchhceeeccccCCcceeecccHHHHHHHHHhh
Confidence 01112334455567899999999999999999999999998766543 4789888888888888887755
No 126
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.71 E-value=2e-06 Score=74.15 Aligned_cols=119 Identities=22% Similarity=0.219 Sum_probs=79.7
Q ss_pred cEEEEcCeeEEEEec----CCCCcEEEEcccCCChhhHHhc------hHHHh-ccCcEEEecCCCCCCCCcch-------
Q 021980 12 NFWTWRGHKIHYVVQ----GEGSPVVLIHGFGASAFHWRYN------IPELA-KRYKVYAVDLLGFGWSEKAI------- 73 (304)
Q Consensus 12 ~~~~~~g~~~~y~~~----g~g~~iv~lHG~~~~~~~~~~~------~~~l~-~~~~vi~~D~~G~G~S~~~~------- 73 (304)
.-.|.||.-+..... ++.|||+|.||+.+++..|-.. .-.|+ .+|.|..-..||--.|.+..
T Consensus 52 ~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~ 131 (403)
T KOG2624|consen 52 EVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSD 131 (403)
T ss_pred EEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCC
Confidence 344567765544332 4568889999999999999432 22344 46999999999976664311
Q ss_pred ---hhhchhhHH-HHHHHHH----HHhcCCCeEEEEechhHHHHHHHHhcCCc---ceeEEEEecCCC
Q 021980 74 ---IEYDAMVWK-DQIVDFL----KEIVKEPAVLVGNSLGGFAALVAAVGLPD---QVTGVALLNSAG 130 (304)
Q Consensus 74 ---~~~~~~~~~-~~l~~~~----~~~~~~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lvli~~~~ 130 (304)
-+++..+++ -||-+.+ +.-+.++.+.+|||-|+...+......|+ +|+..++++|+.
T Consensus 132 ~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 132 KEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred cceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 112222222 1333333 33356789999999999999999988776 799999998866
No 127
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.71 E-value=3.3e-07 Score=69.86 Aligned_cols=48 Identities=8% Similarity=0.065 Sum_probs=36.9
Q ss_pred hccCCCceEEEecCCCCCCCcHHHHHHHHhCCCceEEEe-CCCCCCCcc
Q 021980 232 LSKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLVNF-QAGHCPHDE 279 (304)
Q Consensus 232 l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e 279 (304)
+..++.|+|+++|++|.-.-.+..+.++....++++..+ +.+|+-.+|
T Consensus 203 ~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~ 251 (270)
T KOG4627|consen 203 YTDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIE 251 (270)
T ss_pred hcCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHH
Confidence 577899999999999964444556677777788999888 579975544
No 128
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.69 E-value=3.6e-08 Score=83.53 Aligned_cols=105 Identities=27% Similarity=0.313 Sum_probs=62.0
Q ss_pred CCcEEEEcccCCCh--hhHH-hchHH-Hhc---cCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHh------cCC
Q 021980 29 GSPVVLIHGFGASA--FHWR-YNIPE-LAK---RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI------VKE 95 (304)
Q Consensus 29 g~~iv~lHG~~~~~--~~~~-~~~~~-l~~---~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~------~~~ 95 (304)
.|+++++|||.++. ..|- .+... +.. ++.||++|+...-.................+.+++..+ ..+
T Consensus 71 ~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~~ 150 (331)
T PF00151_consen 71 KPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVPPE 150 (331)
T ss_dssp SEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---GG
T ss_pred CCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCChh
Confidence 46788999998877 4563 44443 343 68999999863322111111111222334444444333 346
Q ss_pred CeEEEEechhHHHHHHHHhcCCc--ceeEEEEecCCCCCC
Q 021980 96 PAVLVGNSLGGFAALVAAVGLPD--QVTGVALLNSAGQFG 133 (304)
Q Consensus 96 ~~~lvGhS~Gg~va~~~a~~~p~--~v~~lvli~~~~~~~ 133 (304)
+++|||||+||-||-..+..... +|.+++-++|+++..
T Consensus 151 ~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 151 NIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLF 190 (331)
T ss_dssp GEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTT
T ss_pred HEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccc
Confidence 89999999999999999988777 899999999987643
No 129
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.66 E-value=8.6e-07 Score=70.82 Aligned_cols=92 Identities=29% Similarity=0.282 Sum_probs=53.8
Q ss_pred EEEEcccCC---ChhhHHhchHHHh--ccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHH----HHH-----hcCCCe
Q 021980 32 VVLIHGFGA---SAFHWRYNIPELA--KRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDF----LKE-----IVKEPA 97 (304)
Q Consensus 32 iv~lHG~~~---~~~~~~~~~~~l~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~----~~~-----~~~~~~ 97 (304)
||++||.+. +..........+. .++.|+.+|+|=.-...-+ ...+|+.+. ++. .+.+++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p-------~~~~D~~~a~~~l~~~~~~~~~d~~~i 73 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPFP-------AALEDVKAAYRWLLKNADKLGIDPERI 73 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSSTT-------HHHHHHHHHHHHHHHTHHHHTEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccccccc-------ccccccccceeeeccccccccccccce
Confidence 689998543 2222233444443 4699999999944222211 112333322 222 234689
Q ss_pred EEEEechhHHHHHHHHhcCCc----ceeEEEEecCCC
Q 021980 98 VLVGNSLGGFAALVAAVGLPD----QVTGVALLNSAG 130 (304)
Q Consensus 98 ~lvGhS~Gg~va~~~a~~~p~----~v~~lvli~~~~ 130 (304)
+|+|+|-||.+++.++....+ .++++++++|..
T Consensus 74 ~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred EEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 999999999999999975433 489999998743
No 130
>PRK04940 hypothetical protein; Provisional
Probab=98.64 E-value=4.9e-06 Score=63.37 Aligned_cols=83 Identities=13% Similarity=0.226 Sum_probs=48.8
Q ss_pred EEEEcccCCChhh--HHhch-HHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhc----CCCeEEEEech
Q 021980 32 VVLIHGFGASAFH--WRYNI-PELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIV----KEPAVLVGNSL 104 (304)
Q Consensus 32 iv~lHG~~~~~~~--~~~~~-~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~lvGhS~ 104 (304)
|++|||+.+|..+ .+... ..+..+.+++ +++ . ..| ... .+.+.+.+..+. .+++.|||.|+
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~~p~~~~~--~l~--~--~~P--~~a----~~~l~~~i~~~~~~~~~~~~~liGSSL 69 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFIDPDVRLI--SYS--T--LHP--KHD----MQHLLKEVDKMLQLSDDERPLICGVGL 69 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheeeCCCCeEE--ECC--C--CCH--HHH----HHHHHHHHHHhhhccCCCCcEEEEeCh
Confidence 7899999988876 53321 1121223333 222 0 111 111 123444444311 25799999999
Q ss_pred hHHHHHHHHhcCCcceeEEEEecCC
Q 021980 105 GGFAALVAAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 105 Gg~va~~~a~~~p~~v~~lvli~~~ 129 (304)
||+.|..+|.++. -+.|++||+
T Consensus 70 GGyyA~~La~~~g---~~aVLiNPA 91 (180)
T PRK04940 70 GGYWAERIGFLCG---IRQVIFNPN 91 (180)
T ss_pred HHHHHHHHHHHHC---CCEEEECCC
Confidence 9999999999875 356778875
No 131
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.60 E-value=1.7e-07 Score=74.23 Aligned_cols=102 Identities=17% Similarity=0.174 Sum_probs=69.0
Q ss_pred CCcEEEEcccCCChhhHHhchHHHhc-cCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHh-------cCCCeEEE
Q 021980 29 GSPVVLIHGFGASAFHWRYNIPELAK-RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI-------VKEPAVLV 100 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~lv 100 (304)
=|.|+|+||+......|..++.+++. +|=|+++++-.--.-+....-.+....++.+.+-++.+ ++.++.++
T Consensus 46 yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~ 125 (307)
T PF07224_consen 46 YPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALS 125 (307)
T ss_pred ccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEe
Confidence 36788999999999999999999975 59999999875322111111011112223333323332 24589999
Q ss_pred EechhHHHHHHHHhcCC--cceeEEEEecCCC
Q 021980 101 GNSLGGFAALVAAVGLP--DQVTGVALLNSAG 130 (304)
Q Consensus 101 GhS~Gg~va~~~a~~~p--~~v~~lvli~~~~ 130 (304)
|||.||-.|+.+|..+. -.+++||-++|..
T Consensus 126 GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 126 GHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred ecCCccHHHHHHHhcccccCchhheecccccC
Confidence 99999999999998773 2478888888754
No 132
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.57 E-value=1.9e-07 Score=74.76 Aligned_cols=84 Identities=24% Similarity=0.341 Sum_probs=49.1
Q ss_pred CcEEEEcccCCChhhHHhchHHHhc---cCcEEEecCCCCC----CCCcchhhhchhhHHHHHHHHHHHhcC--CCeEEE
Q 021980 30 SPVVLIHGFGASAFHWRYNIPELAK---RYKVYAVDLLGFG----WSEKAIIEYDAMVWKDQIVDFLKEIVK--EPAVLV 100 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~~~~~~~~l~~---~~~vi~~D~~G~G----~S~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~lv 100 (304)
.-|||+||+.++...|+.+...+.. ++.-..+...++- .+.... +......++++.+.++.... .++++|
T Consensus 5 hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI-~~~g~rL~~eI~~~~~~~~~~~~~IsfI 83 (217)
T PF05057_consen 5 HLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGI-DVCGERLAEEILEHIKDYESKIRKISFI 83 (217)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccccchhh-HHHHHHHHHHHHHhccccccccccceEE
Confidence 3588999999999999877666654 2221122222221 222111 12223345555555554444 389999
Q ss_pred EechhHHHHHHHHh
Q 021980 101 GNSLGGFAALVAAV 114 (304)
Q Consensus 101 GhS~Gg~va~~~a~ 114 (304)
||||||.++-.+..
T Consensus 84 gHSLGGli~r~al~ 97 (217)
T PF05057_consen 84 GHSLGGLIARYALG 97 (217)
T ss_pred EecccHHHHHHHHH
Confidence 99999998754443
No 133
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.54 E-value=1.5e-07 Score=75.10 Aligned_cols=50 Identities=24% Similarity=0.365 Sum_probs=38.1
Q ss_pred HHHHHHHHHHh---cCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCCCC
Q 021980 82 KDQIVDFLKEI---VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAGQF 132 (304)
Q Consensus 82 ~~~l~~~~~~~---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~~~ 132 (304)
.+...+++... ..+++.|+|.|.||-+|+.+|..+| .|+++|.+++....
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB-
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeE
Confidence 35556666554 2368999999999999999999999 89999999987654
No 134
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.53 E-value=5.5e-07 Score=72.76 Aligned_cols=101 Identities=17% Similarity=0.083 Sum_probs=62.8
Q ss_pred CCCcEEEEcccCCChhhHHhchHHHh----ccCcEEEecCCCCCCCCc-chhhhchhhHHHHHHHHHHHh----cCCCeE
Q 021980 28 EGSPVVLIHGFGASAFHWRYNIPELA----KRYKVYAVDLLGFGWSEK-AIIEYDAMVWKDQIVDFLKEI----VKEPAV 98 (304)
Q Consensus 28 ~g~~iv~lHG~~~~~~~~~~~~~~l~----~~~~vi~~D~~G~G~S~~-~~~~~~~~~~~~~l~~~~~~~----~~~~~~ 98 (304)
++..+||+||+..+...--.....+. -.-.++.+.+|+.|.-.. .....+...-...+.+++..+ ..++++
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ 96 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRIH 96 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEE
Confidence 46689999999887544322222232 224799999999886321 111112222334555555554 457899
Q ss_pred EEEechhHHHHHHHHhc----CC-----cceeEEEEecC
Q 021980 99 LVGNSLGGFAALVAAVG----LP-----DQVTGVALLNS 128 (304)
Q Consensus 99 lvGhS~Gg~va~~~a~~----~p-----~~v~~lvli~~ 128 (304)
|++||||+.+.+..... .+ .++..+++++|
T Consensus 97 ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~Ap 135 (233)
T PF05990_consen 97 ILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAP 135 (233)
T ss_pred EEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECC
Confidence 99999999998876543 21 36778888765
No 135
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.50 E-value=1.5e-05 Score=70.58 Aligned_cols=118 Identities=16% Similarity=0.224 Sum_probs=72.0
Q ss_pred cEEEEc---CeeEEEEecC------CCCcEEEEcccCCChhhHHhchH-------------------HHhccCcEEEecC
Q 021980 12 NFWTWR---GHKIHYVVQG------EGSPVVLIHGFGASAFHWRYNIP-------------------ELAKRYKVYAVDL 63 (304)
Q Consensus 12 ~~~~~~---g~~~~y~~~g------~g~~iv~lHG~~~~~~~~~~~~~-------------------~l~~~~~vi~~D~ 63 (304)
-|++++ +.+++|.-.. +.|.+|++.|.++++..|-...+ .+.+...++.+|.
T Consensus 14 Gyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~ 93 (415)
T PF00450_consen 14 GYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQ 93 (415)
T ss_dssp EEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--
T ss_pred EEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEee
Confidence 466777 7788876543 23567789999888877632211 1223368999995
Q ss_pred C-CCCCCCcchhh---hchhhHHHHHHHHHHHh-------cCCCeEEEEechhHHHHHHHHh----cC------CcceeE
Q 021980 64 L-GFGWSEKAIIE---YDAMVWKDQIVDFLKEI-------VKEPAVLVGNSLGGFAALVAAV----GL------PDQVTG 122 (304)
Q Consensus 64 ~-G~G~S~~~~~~---~~~~~~~~~l~~~~~~~-------~~~~~~lvGhS~Gg~va~~~a~----~~------p~~v~~ 122 (304)
| |-|-|...... .+....++++.+++... ...+++|.|.|+||..+-.+|. .. +=.+++
T Consensus 94 PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkG 173 (415)
T PF00450_consen 94 PVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKG 173 (415)
T ss_dssp STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEE
T ss_pred cCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccccc
Confidence 5 99998643322 24555667777776553 2348999999999987655554 22 345889
Q ss_pred EEEecCC
Q 021980 123 VALLNSA 129 (304)
Q Consensus 123 lvli~~~ 129 (304)
+++.++.
T Consensus 174 i~IGng~ 180 (415)
T PF00450_consen 174 IAIGNGW 180 (415)
T ss_dssp EEEESE-
T ss_pred ceecCcc
Confidence 9988764
No 136
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.50 E-value=8.2e-06 Score=64.09 Aligned_cols=84 Identities=20% Similarity=0.251 Sum_probs=55.4
Q ss_pred CCcEEEEcccCCChhhHHhchHHHhccCc-EEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEechhHH
Q 021980 29 GSPVVLIHGFGASAFHWRYNIPELAKRYK-VYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGF 107 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~~~~~~~~l~~~~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~Gg~ 107 (304)
..-|||..|||.+...++++. +.+++. ++++|+|-- . .+. + .-..+.+.|||+|||-.
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~--~~~~~D~l~~yDYr~l-----~---~d~-----~------~~~y~~i~lvAWSmGVw 69 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI--LPENYDVLICYDYRDL-----D---FDF-----D------LSGYREIYLVAWSMGVW 69 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc--CCCCccEEEEecCccc-----c---ccc-----c------cccCceEEEEEEeHHHH
Confidence 457889999999987666542 133444 466787732 1 110 1 11357899999999999
Q ss_pred HHHHHHhcCCcceeEEEEecCCCCCCCC
Q 021980 108 AALVAAVGLPDQVTGVALLNSAGQFGDG 135 (304)
Q Consensus 108 va~~~a~~~p~~v~~lvli~~~~~~~~~ 135 (304)
+|..+....| +++-+.|++++...+.
T Consensus 70 ~A~~~l~~~~--~~~aiAINGT~~Pid~ 95 (213)
T PF04301_consen 70 AANRVLQGIP--FKRAIAINGTPYPIDD 95 (213)
T ss_pred HHHHHhccCC--cceeEEEECCCCCcCC
Confidence 9888766554 6677778877654443
No 137
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.42 E-value=9e-07 Score=75.59 Aligned_cols=98 Identities=23% Similarity=0.277 Sum_probs=70.3
Q ss_pred CcEEEEcccCCChhhHHhchHHHhc-cCc---EEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEechh
Q 021980 30 SPVVLIHGFGASAFHWRYNIPELAK-RYK---VYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLG 105 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~~~~~~~~l~~-~~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~G 105 (304)
-|+|++||++.+...|..+...+.. ++. ++++++++- ....+. ......+...+.+.+...+.+++.|+|||||
T Consensus 60 ~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~-~~~~~ql~~~V~~~l~~~ga~~v~LigHS~G 137 (336)
T COG1075 60 EPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG-DGTYSL-AVRGEQLFAYVDEVLAKTGAKKVNLIGHSMG 137 (336)
T ss_pred ceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc-CCCccc-cccHHHHHHHHHHHHhhcCCCceEEEeeccc
Confidence 4899999998877778766555543 344 888888865 222111 1222333455555555666789999999999
Q ss_pred HHHHHHHHhcCC--cceeEEEEecCC
Q 021980 106 GFAALVAAVGLP--DQVTGVALLNSA 129 (304)
Q Consensus 106 g~va~~~a~~~p--~~v~~lvli~~~ 129 (304)
|.+...++..++ .+|++++.++++
T Consensus 138 G~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 138 GLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred chhhHHHHhhcCccceEEEEEEeccC
Confidence 999999999988 899999999874
No 138
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.41 E-value=2.5e-05 Score=73.59 Aligned_cols=224 Identities=16% Similarity=0.145 Sum_probs=126.6
Q ss_pred CCCCCCccEEEEcCeeEEEEecCC-------CCc-EEEEcccCCCh-------hhHHhchHHHhccCcEEEecCCCCCCC
Q 021980 5 PFKPEGYNFWTWRGHKIHYVVQGE-------GSP-VVLIHGFGASA-------FHWRYNIPELAKRYKVYAVDLLGFGWS 69 (304)
Q Consensus 5 ~~~~~~~~~~~~~g~~~~y~~~g~-------g~~-iv~lHG~~~~~-------~~~~~~~~~l~~~~~vi~~D~~G~G~S 69 (304)
+.+.........+|...++...-+ +.| +|..||.++|. ..|..+ -.-..++-|+.+|.||-|..
T Consensus 494 ~~p~~~~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~-~~s~~g~~v~~vd~RGs~~~ 572 (755)
T KOG2100|consen 494 ALPIVEFGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV-VVSSRGFAVLQVDGRGSGGY 572 (755)
T ss_pred cCCcceeEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH-hhccCCeEEEEEcCCCcCCc
Confidence 344444556677999998876532 345 45578888632 223332 11134689999999999865
Q ss_pred Ccch--------hhhchhhHHHHHHHHHHHh--cCCCeEEEEechhHHHHHHHHhcCCcceeEE-EEecCCCCCCCCCCC
Q 021980 70 EKAI--------IEYDAMVWKDQIVDFLKEI--VKEPAVLVGNSLGGFAALVAAVGLPDQVTGV-ALLNSAGQFGDGRKG 138 (304)
Q Consensus 70 ~~~~--------~~~~~~~~~~~l~~~~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l-vli~~~~~~~~~~~~ 138 (304)
.... ...+..+....+..+++.. +.+++.|.|+|.||.++.......|+.+.+. +.++|...+. ....
T Consensus 573 G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds 651 (755)
T KOG2100|consen 573 GWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDS 651 (755)
T ss_pred chhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eecc
Confidence 4321 1123333333333333332 3457999999999999999999999555544 7777643211 0000
Q ss_pred CCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHHhHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHH
Q 021980 139 SNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSVLKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTR 218 (304)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (304)
. ..+ +. + . .+... ...|.+.
T Consensus 652 ~---------------~te------------------ry------m--g-------------~p~~~---~~~y~e~--- 671 (755)
T KOG2100|consen 652 T---------------YTE------------------RY------M--G-------------LPSEN---DKGYEES--- 671 (755)
T ss_pred c---------------ccH------------------hh------c--C-------------CCccc---cchhhhc---
Confidence 0 000 00 0 0 00000 0001110
Q ss_pred HHhhccccchhhhhccCCCce-EEEecCCCCCCCcHHHHHHHHhCC--C--ceEEEe-CCCCCCCccCh-HHHHHHHHHH
Q 021980 219 FMLNQSKYTLDSVLSKLSCPL-LLLWGDLDPWVGSAKATRIKEFYP--N--TTLVNF-QAGHCPHDEVP-ELVNKALMDW 291 (304)
Q Consensus 219 ~~~~~~~~~~~~~l~~i~~P~-lii~G~~D~~~~~~~~~~~~~~~~--~--~~~~~~-~~GH~~~~e~p-~~~~~~i~~f 291 (304)
.....+..++.|. |+|||+.|.-++.+.+..+.+.+. + .+..++ +..|..-.-.+ ..+...+..|
T Consensus 672 --------~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~ 743 (755)
T KOG2100|consen 672 --------SVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRF 743 (755)
T ss_pred --------cccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHH
Confidence 1112234566666 999999999999887666654432 1 566666 68998776443 4556778888
Q ss_pred HhccCCC
Q 021980 292 LSTVKPQ 298 (304)
Q Consensus 292 l~~~~~~ 298 (304)
+..+-..
T Consensus 744 ~~~~~~~ 750 (755)
T KOG2100|consen 744 LRDCFGS 750 (755)
T ss_pred HHHHcCc
Confidence 8755443
No 139
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.37 E-value=3e-06 Score=69.79 Aligned_cols=97 Identities=26% Similarity=0.283 Sum_probs=65.6
Q ss_pred CCCc-EEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHH-HHhc--CCCeEEEEec
Q 021980 28 EGSP-VVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFL-KEIV--KEPAVLVGNS 103 (304)
Q Consensus 28 ~g~~-iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~-~~~~--~~~~~lvGhS 103 (304)
+|+. |+|.-|..+-=+. --+...++-+|.|+.+.+||++.|...+.......-+|.+.++. +.++ .++++|.|+|
T Consensus 241 ngq~LvIC~EGNAGFYEv-G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWS 319 (517)
T KOG1553|consen 241 NGQDLVICFEGNAGFYEV-GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWS 319 (517)
T ss_pred CCceEEEEecCCccceEe-eeecChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEee
Confidence 4554 4566665442110 01122344579999999999999987544444444456666664 4454 3579999999
Q ss_pred hhHHHHHHHHhcCCcceeEEEEe
Q 021980 104 LGGFAALVAAVGLPDQVTGVALL 126 (304)
Q Consensus 104 ~Gg~va~~~a~~~p~~v~~lvli 126 (304)
.||.-+...|..||+ |+++|+=
T Consensus 320 IGGF~~~waAs~YPd-VkavvLD 341 (517)
T KOG1553|consen 320 IGGFPVAWAASNYPD-VKAVVLD 341 (517)
T ss_pred cCCchHHHHhhcCCC-ceEEEee
Confidence 999999999999996 7777763
No 140
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.36 E-value=9.8e-06 Score=62.42 Aligned_cols=97 Identities=22% Similarity=0.259 Sum_probs=62.0
Q ss_pred CcEEEEcccCCChhhHHhchHHHh-ccCcEEEecCCC--------CCC---------C-CcchhhhchhhHHHHHHHHHH
Q 021980 30 SPVVLIHGFGASAFHWRYNIPELA-KRYKVYAVDLLG--------FGW---------S-EKAIIEYDAMVWKDQIVDFLK 90 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G--------~G~---------S-~~~~~~~~~~~~~~~l~~~~~ 90 (304)
.+||+|||.+.++..|..++..+. ++.+.|+|--|= .+. + +...+......-++.+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 479999999999999987777764 455666653221 110 0 111112222333455555554
Q ss_pred Hh---c--CCCeEEEEechhHHHHHHHHhcCCcceeEEEEe
Q 021980 91 EI---V--KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALL 126 (304)
Q Consensus 91 ~~---~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli 126 (304)
.. + ..++.+-|.||||++++..+..+|..+.+.+-.
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~ 124 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFAL 124 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeecc
Confidence 43 2 346889999999999999999998767666543
No 141
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.35 E-value=2.9e-06 Score=70.25 Aligned_cols=89 Identities=20% Similarity=0.137 Sum_probs=57.5
Q ss_pred CCCcEEEEcccCCChhhH------HhchHHHh--ccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHH-h-c--CC
Q 021980 28 EGSPVVLIHGFGASAFHW------RYNIPELA--KRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKE-I-V--KE 95 (304)
Q Consensus 28 ~g~~iv~lHG~~~~~~~~------~~~~~~l~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~-~-~--~~ 95 (304)
++..||+.-|.++.-+.. +..+..++ -+.+|+.+.+||.|.|.......+...-.+.+.+++.. . + .+
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~G~ka~ 215 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQGPKAK 215 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhcccCCChh
Confidence 467899999877755441 12233333 25789999999999998765432222222334444432 2 2 36
Q ss_pred CeEEEEechhHHHHHHHHhcC
Q 021980 96 PAVLVGNSLGGFAALVAAVGL 116 (304)
Q Consensus 96 ~~~lvGhS~Gg~va~~~a~~~ 116 (304)
++++.|||+||.|+.+...++
T Consensus 216 ~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 216 NIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred eEEEeeccccHHHHHHHHHhc
Confidence 799999999999988865554
No 142
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.35 E-value=4e-05 Score=65.15 Aligned_cols=102 Identities=22% Similarity=0.099 Sum_probs=60.8
Q ss_pred CCcEEEEcccCC---ChhhHHhchHHH--hccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhc--CCCeEEEE
Q 021980 29 GSPVVLIHGFGA---SAFHWRYNIPEL--AKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIV--KEPAVLVG 101 (304)
Q Consensus 29 g~~iv~lHG~~~---~~~~~~~~~~~l--~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~lvG 101 (304)
.|.||++||.+. +....+.....+ ..++.|+.+|+|=--.-..+..-.+...-...+.+-..+++ .+++.+.|
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~G 158 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAYAAYRWLRANAAELGIDPSRIAVAG 158 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHHHHHHHHHhhhHhhCCCccceEEEe
Confidence 578999998543 333443444444 34699999999854333222111111111112222223333 46899999
Q ss_pred echhHHHHHHHHhcCCc----ceeEEEEecCCC
Q 021980 102 NSLGGFAALVAAVGLPD----QVTGVALLNSAG 130 (304)
Q Consensus 102 hS~Gg~va~~~a~~~p~----~v~~lvli~~~~ 130 (304)
+|-||.+++.++..-.+ .....+++.|..
T Consensus 159 dSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~ 191 (312)
T COG0657 159 DSAGGHLALALALAARDRGLPLPAAQVLISPLL 191 (312)
T ss_pred cCcccHHHHHHHHHHHhcCCCCceEEEEEeccc
Confidence 99999999999986544 466777777654
No 143
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.34 E-value=3.7e-05 Score=61.24 Aligned_cols=58 Identities=16% Similarity=0.358 Sum_probs=50.9
Q ss_pred eEEEecCCCCCCCcHHHHHHHHhCCCceEEEeCCCCC-CCccChHHHHHHHHHHHhccC
Q 021980 239 LLLLWGDLDPWVGSAKATRIKEFYPNTTLVNFQAGHC-PHDEVPELVNKALMDWLSTVK 296 (304)
Q Consensus 239 ~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~GH~-~~~e~p~~~~~~i~~fl~~~~ 296 (304)
+.++.+++|.++|......+.+.+|++++..+++||. ..+-+-|+|-+.|.+-|++..
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~egGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLEGGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEeecCceeeeehhchHHHHHHHHHHHhhh
Confidence 5778899999999988899999999999999999996 455678899999999998765
No 144
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.25 E-value=4.6e-05 Score=59.35 Aligned_cols=113 Identities=17% Similarity=0.133 Sum_probs=61.2
Q ss_pred cEEEEcCeeEEEEecCCCC-cEEEEccc-CCChhhHHhchHHHh-ccCcEEEecCC-CCCCCCc-chh-------hhchh
Q 021980 12 NFWTWRGHKIHYVVQGEGS-PVVLIHGF-GASAFHWRYNIPELA-KRYKVYAVDLL-GFGWSEK-AII-------EYDAM 79 (304)
Q Consensus 12 ~~~~~~g~~~~y~~~g~g~-~iv~lHG~-~~~~~~~~~~~~~l~-~~~~vi~~D~~-G~G~S~~-~~~-------~~~~~ 79 (304)
+...+.|..-++...-+.+ .||.+--+ |-+...=+..++.++ .+|.|++||+. |==.|.. ... ..+..
T Consensus 21 ~~~~v~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~ 100 (242)
T KOG3043|consen 21 REEEVGGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPP 100 (242)
T ss_pred ceEeecCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcc
Confidence 5667777766555433333 45555532 323222456667775 46999999954 4112211 100 01111
Q ss_pred hHHH---HHHHHHHHhc-CCCeEEEEechhHHHHHHHHhcCCcceeEEEE
Q 021980 80 VWKD---QIVDFLKEIV-KEPAVLVGNSLGGFAALVAAVGLPDQVTGVAL 125 (304)
Q Consensus 80 ~~~~---~l~~~~~~~~-~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl 125 (304)
..-. .+.+.+...+ .+++=++|..|||.++..+....| .+.+.++
T Consensus 101 ~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~ 149 (242)
T KOG3043|consen 101 KIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVS 149 (242)
T ss_pred cchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeE
Confidence 1112 3344444444 567889999999987776666665 4444444
No 145
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.25 E-value=1.3e-05 Score=65.12 Aligned_cols=118 Identities=23% Similarity=0.170 Sum_probs=75.9
Q ss_pred EEEEcCeeEEEEecC-----CCC-cEEEEcccCCChhhHHhch--HHHhc--cCcEEEecC-C------CCCCCCcchh-
Q 021980 13 FWTWRGHKIHYVVQG-----EGS-PVVLIHGFGASAFHWRYNI--PELAK--RYKVYAVDL-L------GFGWSEKAII- 74 (304)
Q Consensus 13 ~~~~~g~~~~y~~~g-----~g~-~iv~lHG~~~~~~~~~~~~--~~l~~--~~~vi~~D~-~------G~G~S~~~~~- 74 (304)
...++|.+.+|+..- .++ -||+|||..++..-.+... +.+++ +|-|+.+|- + |+|.+..+..
T Consensus 39 s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~ 118 (312)
T COG3509 39 SFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADR 118 (312)
T ss_pred ccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccc
Confidence 455677777776542 233 4667999988887665543 56654 488888852 2 2233311111
Q ss_pred hh---chhhHHHHHHHHHHHhcCC--CeEEEEechhHHHHHHHHhcCCcceeEEEEecCCC
Q 021980 75 EY---DAMVWKDQIVDFLKEIVKE--PAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 130 (304)
Q Consensus 75 ~~---~~~~~~~~l~~~~~~~~~~--~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~ 130 (304)
.. +...+.+-+..++.+.+++ +|++.|.|-||..+..++..+|+.+.++..+.+..
T Consensus 119 ~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 119 RRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 11 1222233333444455555 79999999999999999999999999999887643
No 146
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.25 E-value=7.5e-05 Score=63.22 Aligned_cols=101 Identities=24% Similarity=0.193 Sum_probs=59.5
Q ss_pred CcEEEEcccCC-----ChhhHHhchHHHhcc--CcEEEecCCCCCCCCcchhhhc-hhhHHHHHHH--HHH-HhcCCCeE
Q 021980 30 SPVVLIHGFGA-----SAFHWRYNIPELAKR--YKVYAVDLLGFGWSEKAIIEYD-AMVWKDQIVD--FLK-EIVKEPAV 98 (304)
Q Consensus 30 ~~iv~lHG~~~-----~~~~~~~~~~~l~~~--~~vi~~D~~G~G~S~~~~~~~~-~~~~~~~l~~--~~~-~~~~~~~~ 98 (304)
|.||++||.|. ....+..+...++.. +-|+.+|+|=-=...-+. .++ ...-...+.+ ++. ..+.+++.
T Consensus 91 p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa-~y~D~~~Al~w~~~~~~~~~~~D~~rv~ 169 (336)
T KOG1515|consen 91 PVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPA-AYDDGWAALKWVLKNSWLKLGADPSRVF 169 (336)
T ss_pred eEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCc-cchHHHHHHHHHHHhHHHHhCCCcccEE
Confidence 46889998644 234566666776554 667777877321111111 111 1011112222 111 12457899
Q ss_pred EEEechhHHHHHHHHhcC------CcceeEEEEecCCCC
Q 021980 99 LVGNSLGGFAALVAAVGL------PDQVTGVALLNSAGQ 131 (304)
Q Consensus 99 lvGhS~Gg~va~~~a~~~------p~~v~~lvli~~~~~ 131 (304)
|+|-|-||.+|..+|.+. +-++++.|++-|...
T Consensus 170 l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 170 LAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred EEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 999999999998888642 457999999987543
No 147
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.17 E-value=2.3e-05 Score=69.26 Aligned_cols=160 Identities=19% Similarity=0.217 Sum_probs=95.1
Q ss_pred CcEEEEcccC----CChhh--HHhchHHHhccCcEEEecCCCC-CC-CCcchhhhchhhHHHHHHHHHHHhcCCCeEEEE
Q 021980 30 SPVVLIHGFG----ASAFH--WRYNIPELAKRYKVYAVDLLGF-GW-SEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVG 101 (304)
Q Consensus 30 ~~iv~lHG~~----~~~~~--~~~~~~~l~~~~~vi~~D~~G~-G~-S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvG 101 (304)
|-++++||.+ .+.++ |........+.-.+.++|++.- |. +-....++.......-+.+...++...+++|+|
T Consensus 177 pl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI~h~ae~~vSf~r~kvlei~gefpha~IiLvG 256 (784)
T KOG3253|consen 177 PLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANIKHAAEYSVSFDRYKVLEITGEFPHAPIILVG 256 (784)
T ss_pred ceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcchHHHHHHHHHHhhhhhhhhhccCCCCceEEEe
Confidence 4577889877 23333 4444444455577888887643 32 111111111111111122223334456899999
Q ss_pred echhHHHHHHHHhcCC-cceeEEEEecCCCCCCCCCCCCCchhhhHHHHHHhhHHHHHHHHHHhhhhhhhhcchhHHHHH
Q 021980 102 NSLGGFAALVAAVGLP-DQVTGVALLNSAGQFGDGRKGSNQSEESTLQKVFLKPLKEIFQRIVLGFLFWQAKQPARIVSV 180 (304)
Q Consensus 102 hS~Gg~va~~~a~~~p-~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (304)
.|||+.|+...+.... ..|.++|+++=+.. .. +.+
T Consensus 257 rsmGAlVachVSpsnsdv~V~~vVCigypl~---~v-----------------------------------dgp------ 292 (784)
T KOG3253|consen 257 RSMGALVACHVSPSNSDVEVDAVVCIGYPLD---TV-----------------------------------DGP------ 292 (784)
T ss_pred cccCceeeEEeccccCCceEEEEEEeccccc---CC-----------------------------------Ccc------
Confidence 9999988888876543 34888888752110 00 000
Q ss_pred hHhhhcCCCCCChHHHHhhhCCCCCCchHHHHHHHHHHHHhhccccchhhhhccCCCceEEEecCCCCCCCcHHHHHHHH
Q 021980 181 LKSVYINSSNVDDYLVESITRPAADPNAAEVYYRLMTRFMLNQSKYTLDSVLSKLSCPLLLLWGDLDPWVGSAKATRIKE 260 (304)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~ 260 (304)
+...++.+-.++.|+|||-|..|..++++..+.+.+
T Consensus 293 --------------------------------------------rgirDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vre 328 (784)
T KOG3253|consen 293 --------------------------------------------RGIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVRE 328 (784)
T ss_pred --------------------------------------------cCCcchhhHhcCCceEEEecCCcccCCHHHHHHHHH
Confidence 000122233577899999999999999999999988
Q ss_pred hCCC-ceEEEeC-CCCCCC
Q 021980 261 FYPN-TTLVNFQ-AGHCPH 277 (304)
Q Consensus 261 ~~~~-~~~~~~~-~GH~~~ 277 (304)
.... .++++++ ++|..-
T Consensus 329 KMqA~~elhVI~~adhsma 347 (784)
T KOG3253|consen 329 KMQAEVELHVIGGADHSMA 347 (784)
T ss_pred HhhccceEEEecCCCcccc
Confidence 7644 5788885 789753
No 148
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.16 E-value=2.1e-05 Score=68.97 Aligned_cols=49 Identities=24% Similarity=0.426 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHh-----cCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCC
Q 021980 81 WKDQIVDFLKEI-----VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 81 ~~~~l~~~~~~~-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~ 129 (304)
++++|.-++++. +.++.+|+|+||||..|+.++.++|+++.+++.+++.
T Consensus 269 l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 269 VQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 345666666554 2346899999999999999999999999999998763
No 149
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.15 E-value=7e-06 Score=67.44 Aligned_cols=49 Identities=22% Similarity=0.496 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhc-C--CCeEEEEechhHHHHHHHHhcCCcceeEEEEecCC
Q 021980 81 WKDQIVDFLKEIV-K--EPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 81 ~~~~l~~~~~~~~-~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~ 129 (304)
+.++|..++++.- . ++..|+|+||||..|+.++.+||+.+.+++++++.
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 3456666665542 1 23799999999999999999999999999999864
No 150
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.14 E-value=5e-06 Score=70.34 Aligned_cols=98 Identities=28% Similarity=0.363 Sum_probs=52.5
Q ss_pred CCcEEEEcccCCChhh--------------HH----hchHHHh-ccCcEEEecCCCCCCCCcch-----hhhchhhHH--
Q 021980 29 GSPVVLIHGFGASAFH--------------WR----YNIPELA-KRYKVYAVDLLGFGWSEKAI-----IEYDAMVWK-- 82 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~--------------~~----~~~~~l~-~~~~vi~~D~~G~G~S~~~~-----~~~~~~~~~-- 82 (304)
-|.||++||-++.... |+ .....|+ .+|-|+++|.+|+|...... .+++.+.++
T Consensus 115 ~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~ 194 (390)
T PF12715_consen 115 FPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARN 194 (390)
T ss_dssp EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHH
T ss_pred CCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHH
Confidence 4679999987665422 11 1234454 45999999999999653211 111111111
Q ss_pred --------------H--HHHHHHHHh---cCCCeEEEEechhHHHHHHHHhcCCcceeEEEEec
Q 021980 83 --------------D--QIVDFLKEI---VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLN 127 (304)
Q Consensus 83 --------------~--~l~~~~~~~---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~ 127 (304)
+ .+.++++.+ +.+++.++|+||||..++.+|+.. ++|++.|..+
T Consensus 195 ~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~ 257 (390)
T PF12715_consen 195 LLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANG 257 (390)
T ss_dssp HHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES
T ss_pred HHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhh
Confidence 1 123333332 346899999999999999999885 5787777653
No 151
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.04 E-value=1.2e-05 Score=69.72 Aligned_cols=99 Identities=26% Similarity=0.281 Sum_probs=53.6
Q ss_pred CcEEEEcccCCChhhHHhchHHHh-ccCcEEEecCCCC-CC-----CCcc--hh----------------hh-chhhH--
Q 021980 30 SPVVLIHGFGASAFHWRYNIPELA-KRYKVYAVDLLGF-GW-----SEKA--II----------------EY-DAMVW-- 81 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~-G~-----S~~~--~~----------------~~-~~~~~-- 81 (304)
|.|||=||++++...+..+...|+ .+|=|+++|+|.. +- .+.. .. .. ....+
T Consensus 101 PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (379)
T PF03403_consen 101 PVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFEL 180 (379)
T ss_dssp EEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHHH
T ss_pred CEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHHH
Confidence 568889999999999999988886 5699999999953 21 0110 00 00 00000
Q ss_pred --------HHHHH---HHHHHh-----------------------cCCCeEEEEechhHHHHHHHHhcCCcceeEEEEec
Q 021980 82 --------KDQIV---DFLKEI-----------------------VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLN 127 (304)
Q Consensus 82 --------~~~l~---~~~~~~-----------------------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~ 127 (304)
++++. +.+..+ +.+++.++|||+||.-++..+.+. .+++..|+++
T Consensus 181 R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD 259 (379)
T PF03403_consen 181 RNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGILLD 259 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEEeC
Confidence 11222 222221 134689999999999998887776 6799999988
Q ss_pred CC
Q 021980 128 SA 129 (304)
Q Consensus 128 ~~ 129 (304)
+.
T Consensus 260 ~W 261 (379)
T PF03403_consen 260 PW 261 (379)
T ss_dssp --
T ss_pred Cc
Confidence 74
No 152
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.02 E-value=3.6e-05 Score=70.11 Aligned_cols=97 Identities=23% Similarity=0.259 Sum_probs=56.5
Q ss_pred CCCcEEEEcccCCChhhHHhchHHHhc-----------------cCcEEEecCCCCCCCCcc-hhhhchhhHHHHHHHHH
Q 021980 28 EGSPVVLIHGFGASAFHWRYNIPELAK-----------------RYKVYAVDLLGFGWSEKA-IIEYDAMVWKDQIVDFL 89 (304)
Q Consensus 28 ~g~~iv~lHG~~~~~~~~~~~~~~l~~-----------------~~~vi~~D~~G~G~S~~~-~~~~~~~~~~~~l~~~~ 89 (304)
+|-||||++|..||-..-|.++...+. +++.++.|+-+= -. .......+.++.+.+.|
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe----~tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE----FTAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch----hhhhccHhHHHHHHHHHHHH
Confidence 367999999999887666665544331 255666665430 00 11122333344444443
Q ss_pred HH---h--c--------CCCeEEEEechhHHHHHHHHhc---CCcceeEEEEecC
Q 021980 90 KE---I--V--------KEPAVLVGNSLGGFAALVAAVG---LPDQVTGVALLNS 128 (304)
Q Consensus 90 ~~---~--~--------~~~~~lvGhS~Gg~va~~~a~~---~p~~v~~lvli~~ 128 (304)
.. + + .+.++|+||||||+||...+.. .++.|.-++..++
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlss 218 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSS 218 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcC
Confidence 32 2 1 1239999999999999877653 3556665665554
No 153
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.02 E-value=3.3e-05 Score=53.89 Aligned_cols=61 Identities=30% Similarity=0.336 Sum_probs=53.6
Q ss_pred CCceEEEecCCCCCCCcHHHHHHHHhCCCceEEEe-CCCCCCCccChHHHHHHHHHHHhccC
Q 021980 236 SCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLVNF-QAGHCPHDEVPELVNKALMDWLSTVK 296 (304)
Q Consensus 236 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~p~~~~~~i~~fl~~~~ 296 (304)
..|+|++.++.|+++|.+.++.+++.+++++++++ +.||......-.-+.+++.+||....
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G~ 95 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDGT 95 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHcCC
Confidence 58999999999999999999999999999999988 57999886555677889999997544
No 154
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.99 E-value=3e-05 Score=61.41 Aligned_cols=100 Identities=22% Similarity=0.273 Sum_probs=64.3
Q ss_pred CcEEEEcccCCChhhHHhchHHHhccCc------EEEecCCCC----CCCC----cch-------hhhchhhHHHHHHHH
Q 021980 30 SPVVLIHGFGASAFHWRYNIPELAKRYK------VYAVDLLGF----GWSE----KAI-------IEYDAMVWKDQIVDF 88 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~~~~~~~~l~~~~~------vi~~D~~G~----G~S~----~~~-------~~~~~~~~~~~l~~~ 88 (304)
-|.+|+||.+++..+...++.++.+.++ ++..|--|- |.=+ .|. ..-+...+...+...
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 4899999999999999999998876652 455555552 1101 111 011222233333333
Q ss_pred H----HHhcCCCeEEEEechhHHHHHHHHhcCCc-----ceeEEEEecCC
Q 021980 89 L----KEIVKEPAVLVGNSLGGFAALVAAVGLPD-----QVTGVALLNSA 129 (304)
Q Consensus 89 ~----~~~~~~~~~lvGhS~Gg~va~~~a~~~p~-----~v~~lvli~~~ 129 (304)
+ .+.++.++.+|||||||.-...|+..+-+ .++++|.++++
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 3 34568899999999999988888875422 47788887653
No 155
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.98 E-value=6e-05 Score=61.14 Aligned_cols=35 Identities=23% Similarity=0.373 Sum_probs=32.5
Q ss_pred CCeEEEEechhHHHHHHHHhcCCcceeEEEEecCC
Q 021980 95 EPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 95 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~ 129 (304)
.++.++|.|+||+-++.++.++|+.+++.+.+++.
T Consensus 269 sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 269 SRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred ceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 47999999999999999999999999999999764
No 156
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.98 E-value=0.00092 Score=58.76 Aligned_cols=97 Identities=26% Similarity=0.279 Sum_probs=58.5
Q ss_pred CCcEEEE-----cccCCChhhHHh-chHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhc-----CCCe
Q 021980 29 GSPVVLI-----HGFGASAFHWRY-NIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIV-----KEPA 97 (304)
Q Consensus 29 g~~iv~l-----HG~~~~~~~~~~-~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~ 97 (304)
+.|+|.+ ||-|-.+.--+. +--.|..++-|+-+.+.- .+...-+..+.......|++++. ..++
T Consensus 68 krP~vViDPRAGHGpGIGGFK~dSevG~AL~~GHPvYFV~F~p-----~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp 142 (581)
T PF11339_consen 68 KRPFVVIDPRAGHGPGIGGFKPDSEVGVALRAGHPVYFVGFFP-----EPEPGQTLEDVMRAEAAFVEEVAERHPDAPKP 142 (581)
T ss_pred CCCeEEeCCCCCCCCCccCCCcccHHHHHHHcCCCeEEEEecC-----CCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 4566655 654333322233 334566677776654431 11112233343444445554442 2378
Q ss_pred EEEEechhHHHHHHHHhcCCcceeEEEEecCCC
Q 021980 98 VLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 130 (304)
Q Consensus 98 ~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~ 130 (304)
+|+|..-||-.++.+|+.+|+.+..+|+-+++.
T Consensus 143 ~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPl 175 (581)
T PF11339_consen 143 NLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPL 175 (581)
T ss_pred eEEeccHHHHHHHHHHhcCcCccCceeecCCCc
Confidence 999999999999999999999999888766543
No 157
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.90 E-value=0.00075 Score=56.57 Aligned_cols=81 Identities=28% Similarity=0.250 Sum_probs=46.4
Q ss_pred hchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHH---HHhc---CCCeEEEEechhHHHHHHHHh---c-C
Q 021980 47 YNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFL---KEIV---KEPAVLVGNSLGGFAALVAAV---G-L 116 (304)
Q Consensus 47 ~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~---~~~~---~~~~~lvGhS~Gg~va~~~a~---~-~ 116 (304)
.+...|+++|.|+++|+.|-|..-.. .........|.+.... ...+ ..++.++|||-||.-++..|. . .
T Consensus 18 ~l~~~L~~GyaVv~pDY~Glg~~y~~-~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YA 96 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEGLGTPYLN-GRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYA 96 (290)
T ss_pred HHHHHHHCCCEEEecCCCCCCCcccC-cHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhC
Confidence 34456788999999999999973211 1111112223333222 1122 247999999999987655443 2 3
Q ss_pred Ccc---eeEEEEecC
Q 021980 117 PDQ---VTGVALLNS 128 (304)
Q Consensus 117 p~~---v~~lvli~~ 128 (304)
||. +.+.++..+
T Consensus 97 peL~~~l~Gaa~gg~ 111 (290)
T PF03583_consen 97 PELNRDLVGAAAGGP 111 (290)
T ss_pred cccccceeEEeccCC
Confidence 554 455555443
No 158
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.85 E-value=9.3e-05 Score=64.70 Aligned_cols=78 Identities=17% Similarity=0.222 Sum_probs=52.2
Q ss_pred hHHhchHHHhc-cC----cE--EEecCCCCCCCCcchhhhchhhHHHHHHHHHHH---hcCCCeEEEEechhHHHHHHHH
Q 021980 44 HWRYNIPELAK-RY----KV--YAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKE---IVKEPAVLVGNSLGGFAALVAA 113 (304)
Q Consensus 44 ~~~~~~~~l~~-~~----~v--i~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~lvGhS~Gg~va~~~a 113 (304)
.|..+++.|.+ +| .+ .-+|+|= +.. ....+...+.+.++. ...+|++||||||||.++..+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~------~~~--~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL------SPA--ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh------chh--hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHH
Confidence 78889998865 22 22 3378772 111 122333445444443 3467999999999999999998
Q ss_pred hcCCc------ceeEEEEecCC
Q 021980 114 VGLPD------QVTGVALLNSA 129 (304)
Q Consensus 114 ~~~p~------~v~~lvli~~~ 129 (304)
...+. .|+++|.++++
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTP 159 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCC
Confidence 87643 59999999864
No 159
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.79 E-value=8.8e-05 Score=62.06 Aligned_cols=86 Identities=13% Similarity=0.152 Sum_probs=50.9
Q ss_pred CCcEEEEcccCCChh--hHHh--chHHHhccCcEEEecCCCCCCC-----CcchhhhchhhHHHHHHHHHHHhcCCCeEE
Q 021980 29 GSPVVLIHGFGASAF--HWRY--NIPELAKRYKVYAVDLLGFGWS-----EKAIIEYDAMVWKDQIVDFLKEIVKEPAVL 99 (304)
Q Consensus 29 g~~iv~lHG~~~~~~--~~~~--~~~~l~~~~~vi~~D~~G~G~S-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l 99 (304)
+..+||+||+..+-. .++. +.....-...+|.+.+|.-|.- |+...+++...+..-+..+.+....++++|
T Consensus 116 k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~i 195 (377)
T COG4782 116 KTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIYL 195 (377)
T ss_pred CeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEEE
Confidence 456899999866432 2322 2222233477899999988853 222223333222222223333334678999
Q ss_pred EEechhHHHHHHHHh
Q 021980 100 VGNSLGGFAALVAAV 114 (304)
Q Consensus 100 vGhS~Gg~va~~~a~ 114 (304)
++||||..+.++...
T Consensus 196 lAHSMGtwl~~e~Lr 210 (377)
T COG4782 196 LAHSMGTWLLMEALR 210 (377)
T ss_pred EEecchHHHHHHHHH
Confidence 999999999887664
No 160
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.75 E-value=0.00064 Score=60.94 Aligned_cols=115 Identities=18% Similarity=0.139 Sum_probs=74.9
Q ss_pred EEcCeeEEEEe---c--CCCCcEEEEcccCCChh---hH--HhchH---HH-hccCcEEEecCCCCCCCCcchhhhch--
Q 021980 15 TWRGHKIHYVV---Q--GEGSPVVLIHGFGASAF---HW--RYNIP---EL-AKRYKVYAVDLLGFGWSEKAIIEYDA-- 78 (304)
Q Consensus 15 ~~~g~~~~y~~---~--g~g~~iv~lHG~~~~~~---~~--~~~~~---~l-~~~~~vi~~D~~G~G~S~~~~~~~~~-- 78 (304)
+-||++++-.. . |+.|+++..+-++-... .+ ....+ .+ +.+|.||..|.||.|.|+.....+..
T Consensus 26 MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~~E 105 (563)
T COG2936 26 MRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESSRE 105 (563)
T ss_pred ecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceecccc
Confidence 56899988543 3 34466666773333222 11 12233 23 56799999999999999875332222
Q ss_pred hhHHHHHHHHHHHhc--CCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCC
Q 021980 79 MVWKDQIVDFLKEIV--KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 79 ~~~~~~l~~~~~~~~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~ 129 (304)
..-.-++++.+.+.. ..+|-.+|-|++|.-.+.+|+..|..+++++-.++.
T Consensus 106 ~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~ 158 (563)
T COG2936 106 AEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGL 158 (563)
T ss_pred ccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccc
Confidence 111235566666643 358999999999999999999888888877766543
No 161
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.59 E-value=0.00031 Score=62.67 Aligned_cols=100 Identities=21% Similarity=0.204 Sum_probs=59.0
Q ss_pred CcEEEEcccCCChhh-H--HhchHHHhcc--CcEEEecCCCCCCCCcch-------hhhchhhHHHHHHHHHHHhc----
Q 021980 30 SPVVLIHGFGASAFH-W--RYNIPELAKR--YKVYAVDLLGFGWSEKAI-------IEYDAMVWKDQIVDFLKEIV---- 93 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~-~--~~~~~~l~~~--~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~l~~~~~~~~---- 93 (304)
.||+|.-|.-++... | ...+-.|++. --+|++++|-+|.|.+-. .-.+.++-.+|+..|++.+.
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~ 108 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYN 108 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhc
Confidence 445554454333322 2 1233445554 468999999999996421 12344455567777775543
Q ss_pred ---CCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCC
Q 021980 94 ---KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 94 ---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~ 129 (304)
..|++++|-|.||++|..+-.+||+.|.+.+.-+++
T Consensus 109 ~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSap 147 (434)
T PF05577_consen 109 TAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAP 147 (434)
T ss_dssp TGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--
T ss_pred CCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccce
Confidence 137999999999999999999999999998876653
No 162
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=97.58 E-value=0.00019 Score=60.57 Aligned_cols=87 Identities=25% Similarity=0.301 Sum_probs=57.1
Q ss_pred cEEEEcccCCChhhHHhchHHHhc-cCcEEEecCCCC--CCCCcchh-------------hhchhhHHHHHHHH------
Q 021980 31 PVVLIHGFGASAFHWRYNIPELAK-RYKVYAVDLLGF--GWSEKAII-------------EYDAMVWKDQIVDF------ 88 (304)
Q Consensus 31 ~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~--G~S~~~~~-------------~~~~~~~~~~l~~~------ 88 (304)
.||+=||.|.+-..+..+.+.+++ +|-|.++|+||- |..+.... ..+.....+.+.+.
T Consensus 73 lvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l 152 (365)
T COG4188 73 LVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPAL 152 (365)
T ss_pred eEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCccc
Confidence 355569999999999999999965 699999999994 44332110 11111222222222
Q ss_pred HHHhcCCCeEEEEechhHHHHHHHHhcCC
Q 021980 89 LKEIVKEPAVLVGNSLGGFAALVAAVGLP 117 (304)
Q Consensus 89 ~~~~~~~~~~lvGhS~Gg~va~~~a~~~p 117 (304)
-.+++..++-++|||+||.-+++.+....
T Consensus 153 ~~~ld~~~Vgv~GhS~GG~T~m~laGA~~ 181 (365)
T COG4188 153 AGRLDPQRVGVLGHSFGGYTAMELAGAEL 181 (365)
T ss_pred ccccCccceEEEecccccHHHHHhccccc
Confidence 11223468999999999999999886543
No 163
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.56 E-value=0.0022 Score=57.68 Aligned_cols=95 Identities=15% Similarity=0.122 Sum_probs=62.5
Q ss_pred CcEEEEcccCCCh-----hhHHhchH--HH-hccCcEEEecCCCCCCCCcc--------hhhhchhhHHHHHHHHHHHh-
Q 021980 30 SPVVLIHGFGASA-----FHWRYNIP--EL-AKRYKVYAVDLLGFGWSEKA--------IIEYDAMVWKDQIVDFLKEI- 92 (304)
Q Consensus 30 ~~iv~lHG~~~~~-----~~~~~~~~--~l-~~~~~vi~~D~~G~G~S~~~--------~~~~~~~~~~~~l~~~~~~~- 92 (304)
|+++++-|.++-. ..|...+. .| +.+|-|+.+|-||....... ...-+.++.++-+.-+.+..
T Consensus 643 ptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~g 722 (867)
T KOG2281|consen 643 PTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTG 722 (867)
T ss_pred ceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcC
Confidence 5788898877632 33322222 23 35799999999997654321 11223444444444444444
Q ss_pred --cCCCeEEEEechhHHHHHHHHhcCCcceeEEE
Q 021980 93 --VKEPAVLVGNSLGGFAALVAAVGLPDQVTGVA 124 (304)
Q Consensus 93 --~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 124 (304)
+.+++.+-|+|.||.+++....++|+-++..|
T Consensus 723 fidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAI 756 (867)
T KOG2281|consen 723 FIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAI 756 (867)
T ss_pred cccchheeEeccccccHHHHHHhhcCcceeeEEe
Confidence 34689999999999999999999998776555
No 164
>PLN02606 palmitoyl-protein thioesterase
Probab=97.54 E-value=0.00096 Score=55.15 Aligned_cols=99 Identities=21% Similarity=0.195 Sum_probs=60.3
Q ss_pred CCCcEEEEcccC--CChhhHHhchHHHh--ccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHh--cCCCeEEEE
Q 021980 28 EGSPVVLIHGFG--ASAFHWRYNIPELA--KRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI--VKEPAVLVG 101 (304)
Q Consensus 28 ~g~~iv~lHG~~--~~~~~~~~~~~~l~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~lvG 101 (304)
...|+|+.||+| +++..+..+.+.+. ...-+..+. .|-+..+ .. -......++.+.+.+... ..+-+++||
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~-s~-~~~~~~Qv~~vce~l~~~~~L~~G~naIG 101 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQD-SL-FMPLRQQASIACEKIKQMKELSEGYNIVA 101 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCccc-cc-ccCHHHHHHHHHHHHhcchhhcCceEEEE
Confidence 346999999999 55556777766664 233333332 2322211 00 012222233333333331 123599999
Q ss_pred echhHHHHHHHHhcCCc--ceeEEEEecCC
Q 021980 102 NSLGGFAALVAAVGLPD--QVTGVALLNSA 129 (304)
Q Consensus 102 hS~Gg~va~~~a~~~p~--~v~~lvli~~~ 129 (304)
+|-||.++-.++.+.|+ .|+.+|.+++.
T Consensus 102 fSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 102 ESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred EcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 99999999999999987 49999998763
No 165
>COG3150 Predicted esterase [General function prediction only]
Probab=97.46 E-value=0.00041 Score=51.51 Aligned_cols=89 Identities=20% Similarity=0.304 Sum_probs=59.2
Q ss_pred EEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEechhHHHHHH
Q 021980 32 VVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAALV 111 (304)
Q Consensus 32 iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~Gg~va~~ 111 (304)
||.||||-+|..+.+.+.-. +.+..|.|-.+-|.+.. ..+....++.+.+.+...+.....|+|-|+||..|..
T Consensus 2 ilYlHGFnSSP~shka~l~~-----q~~~~~~~~i~y~~p~l-~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~ 75 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLL-----QFIDEDVRDIEYSTPHL-PHDPQQALKELEKAVQELGDESPLIVGSSLGGYYATW 75 (191)
T ss_pred eEEEecCCCCcccHHHHHHH-----HHHhccccceeeecCCC-CCCHHHHHHHHHHHHHHcCCCCceEEeecchHHHHHH
Confidence 78999998888877654321 12333344444443322 2344455678888888887777899999999999999
Q ss_pred HHhcCCcceeEEEEecCC
Q 021980 112 AAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 112 ~a~~~p~~v~~lvli~~~ 129 (304)
++.++- +++ |++||+
T Consensus 76 l~~~~G--ira-v~~NPa 90 (191)
T COG3150 76 LGFLCG--IRA-VVFNPA 90 (191)
T ss_pred HHHHhC--Chh-hhcCCC
Confidence 998764 333 445654
No 166
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.45 E-value=0.0057 Score=52.56 Aligned_cols=62 Identities=16% Similarity=0.217 Sum_probs=49.1
Q ss_pred hccCCCceEEEecCCCCCCCcHHHHHHHHhCCCce-EEEe-CCCCCCCccChHHHHHHHHHHHhccC
Q 021980 232 LSKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTT-LVNF-QAGHCPHDEVPELVNKALMDWLSTVK 296 (304)
Q Consensus 232 l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~-~~~~-~~GH~~~~e~p~~~~~~i~~fl~~~~ 296 (304)
..++++|.++|.|..|.+..+.....+-..+|+.+ +..+ +++|..-. ..+.+.+..|+....
T Consensus 258 ~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~~ 321 (367)
T PF10142_consen 258 RDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNRIQ 321 (367)
T ss_pred HHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHHHH
Confidence 35679999999999999999999988888888754 4555 79998665 566677888886643
No 167
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.40 E-value=0.0017 Score=53.82 Aligned_cols=99 Identities=14% Similarity=0.121 Sum_probs=58.9
Q ss_pred CCCcEEEEcccCCChhh--HHhchHHHhc--cCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHh--cCCCeEEEE
Q 021980 28 EGSPVVLIHGFGASAFH--WRYNIPELAK--RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI--VKEPAVLVG 101 (304)
Q Consensus 28 ~g~~iv~lHG~~~~~~~--~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~lvG 101 (304)
...|+|+.||+|.+... ...+.+.+.+ +..+.++.. |.+.....-......++.+.+.+... ..+-+++||
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~s~~~~~~~Qve~vce~l~~~~~l~~G~naIG 100 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGDSWLMPLTQQAEIACEKVKQMKELSQGYNIVG 100 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCccccceeCHHHHHHHHHHHHhhchhhhCcEEEEE
Confidence 35689999999886653 3333333322 234444432 33211111112222334444444331 124599999
Q ss_pred echhHHHHHHHHhcCCc--ceeEEEEecCC
Q 021980 102 NSLGGFAALVAAVGLPD--QVTGVALLNSA 129 (304)
Q Consensus 102 hS~Gg~va~~~a~~~p~--~v~~lvli~~~ 129 (304)
+|-||.++-.++.+.|+ .|+.+|.+++.
T Consensus 101 fSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 101 RSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred EccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 99999999999999987 49999998863
No 168
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.37 E-value=0.026 Score=46.02 Aligned_cols=60 Identities=22% Similarity=0.323 Sum_probs=45.8
Q ss_pred ccCCCceEEEecCCCCCCCcHHHHHHHHhCC--C--ceEEEe-CCCCCCCc-cChHHHHHHHHHHH
Q 021980 233 SKLSCPLLLLWGDLDPWVGSAKATRIKEFYP--N--TTLVNF-QAGHCPHD-EVPELVNKALMDWL 292 (304)
Q Consensus 233 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~--~--~~~~~~-~~GH~~~~-e~p~~~~~~i~~fl 292 (304)
....+|-|+|+++.|.+++.+..++..+... + .+...+ +++|..|+ ++|++..+.+.+|+
T Consensus 175 ~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 175 SPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 3456899999999999999987776654432 2 334445 57898764 79999999999985
No 169
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.33 E-value=0.00061 Score=51.37 Aligned_cols=48 Identities=23% Similarity=0.304 Sum_probs=33.9
Q ss_pred HHHHHHHHHh----cCCCeEEEEechhHHHHHHHHhcCCc----ceeEEEEecCCC
Q 021980 83 DQIVDFLKEI----VKEPAVLVGNSLGGFAALVAAVGLPD----QVTGVALLNSAG 130 (304)
Q Consensus 83 ~~l~~~~~~~----~~~~~~lvGhS~Gg~va~~~a~~~p~----~v~~lvli~~~~ 130 (304)
+.+.+.++.. ...+++++|||+||.+|..++...+. ....++..+++.
T Consensus 12 ~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 12 NLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 4444444443 45789999999999999999887654 566677776543
No 170
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.26 E-value=0.00072 Score=61.39 Aligned_cols=100 Identities=17% Similarity=0.124 Sum_probs=58.1
Q ss_pred CCcEEEEcccCC---ChhhHHhchHHHh-c-c-CcEEEecCC----CCCCCCcc--hhhhchhh---HHHHHHHHHHHhc
Q 021980 29 GSPVVLIHGFGA---SAFHWRYNIPELA-K-R-YKVYAVDLL----GFGWSEKA--IIEYDAMV---WKDQIVDFLKEIV 93 (304)
Q Consensus 29 g~~iv~lHG~~~---~~~~~~~~~~~l~-~-~-~~vi~~D~~----G~G~S~~~--~~~~~~~~---~~~~l~~~~~~~~ 93 (304)
.|+||++||.+. +...+ ....+. . . +-|+.+++| |+..+... ..+....+ ..+.+.+.++..+
T Consensus 95 ~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fg 172 (493)
T cd00312 95 LPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFG 172 (493)
T ss_pred CCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhC
Confidence 467899999532 22222 122332 2 2 788889988 33333211 11111111 1233334445544
Q ss_pred --CCCeEEEEechhHHHHHHHHhc--CCcceeEEEEecCCC
Q 021980 94 --KEPAVLVGNSLGGFAALVAAVG--LPDQVTGVALLNSAG 130 (304)
Q Consensus 94 --~~~~~lvGhS~Gg~va~~~a~~--~p~~v~~lvli~~~~ 130 (304)
.++++|+|+|.||..+..++.. .+..++++|+.++..
T Consensus 173 gd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 173 GDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred CCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 4589999999999998888776 355788888887644
No 171
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.24 E-value=0.0018 Score=53.14 Aligned_cols=100 Identities=20% Similarity=0.132 Sum_probs=50.9
Q ss_pred CCcEEEEcccCCCh---hhHHhchHHHh---ccCcEEEecCCCCCCCCcchhh--hchhhHHHHHHHHHHHhc--CCCeE
Q 021980 29 GSPVVLIHGFGASA---FHWRYNIPELA---KRYKVYAVDLLGFGWSEKAIIE--YDAMVWKDQIVDFLKEIV--KEPAV 98 (304)
Q Consensus 29 g~~iv~lHG~~~~~---~~~~~~~~~l~---~~~~vi~~D~~G~G~S~~~~~~--~~~~~~~~~l~~~~~~~~--~~~~~ 98 (304)
-.|||+.||+|.+. ..+..+...+. .+.-|..++. |-+.++..... .......+.+.+.+.... .+-++
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~~ 83 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGFN 83 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-EE
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhccee
Confidence 35899999998754 24555444443 3455666664 33322111111 122233344444444321 25699
Q ss_pred EEEechhHHHHHHHHhcCCc-ceeEEEEecCC
Q 021980 99 LVGNSLGGFAALVAAVGLPD-QVTGVALLNSA 129 (304)
Q Consensus 99 lvGhS~Gg~va~~~a~~~p~-~v~~lvli~~~ 129 (304)
++|+|-||.+.-.++.+.|+ .|+.+|.++++
T Consensus 84 ~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 84 AIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp EEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred eeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 99999999999999998875 59999998863
No 172
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.16 E-value=0.0081 Score=50.86 Aligned_cols=99 Identities=15% Similarity=0.117 Sum_probs=60.8
Q ss_pred cEEEEcccCCChh---hHHhchHHHhc-cCcEEEecCCC--CCCCC--------------cchhh-------------hc
Q 021980 31 PVVLIHGFGASAF---HWRYNIPELAK-RYKVYAVDLLG--FGWSE--------------KAIIE-------------YD 77 (304)
Q Consensus 31 ~iv~lHG~~~~~~---~~~~~~~~l~~-~~~vi~~D~~G--~G~S~--------------~~~~~-------------~~ 77 (304)
.+|+|||.+.+.. .-..+-..|.+ +|..+++.+|. ...+. ..... -.
T Consensus 89 ~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 168 (310)
T PF12048_consen 89 AVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEA 168 (310)
T ss_pred EEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhHH
Confidence 6899999888653 22344445554 59999988887 11000 00000 00
Q ss_pred h----hhHHH---HHHHHHHHhcCCCeEEEEechhHHHHHHHHhcCCc-ceeEEEEecCC
Q 021980 78 A----MVWKD---QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPD-QVTGVALLNSA 129 (304)
Q Consensus 78 ~----~~~~~---~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lvli~~~ 129 (304)
. ..... .+.+++...+.++++||||+.|+..+..|....+. .+.++|+|++.
T Consensus 169 ~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 169 REAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 1 11112 22333334445669999999999999999987654 58999999863
No 173
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.11 E-value=0.0048 Score=49.69 Aligned_cols=94 Identities=23% Similarity=0.255 Sum_probs=60.8
Q ss_pred CcEEEEcccCCChhh--HHhchHHHhc--cCcEEEecCCCCC--CCCcchhhhchhhHHHHHHHHHHHh--cCCCeEEEE
Q 021980 30 SPVVLIHGFGASAFH--WRYNIPELAK--RYKVYAVDLLGFG--WSEKAIIEYDAMVWKDQIVDFLKEI--VKEPAVLVG 101 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~--~~~~~~~l~~--~~~vi~~D~~G~G--~S~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~lvG 101 (304)
.|+|++||++.+... ...+.+.+.+ +..|+++| -|-| .|.- ....+.++.+.+.+... ..+-++++|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~le-ig~g~~~s~l----~pl~~Qv~~~ce~v~~m~~lsqGynivg 98 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLE-IGDGIKDSSL----MPLWEQVDVACEKVKQMPELSQGYNIVG 98 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEE-ecCCcchhhh----ccHHHHHHHHHHHHhcchhccCceEEEE
Confidence 689999999887766 6666666655 36788887 3444 2211 11112223333333321 134699999
Q ss_pred echhHHHHHHHHhcCCc-ceeEEEEecC
Q 021980 102 NSLGGFAALVAAVGLPD-QVTGVALLNS 128 (304)
Q Consensus 102 hS~Gg~va~~~a~~~p~-~v~~lvli~~ 128 (304)
.|-||.++-.++...++ .|..+|.+++
T Consensus 99 ~SQGglv~Raliq~cd~ppV~n~ISL~g 126 (296)
T KOG2541|consen 99 YSQGGLVARALIQFCDNPPVKNFISLGG 126 (296)
T ss_pred EccccHHHHHHHHhCCCCCcceeEeccC
Confidence 99999999998886554 4778888765
No 174
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.08 E-value=0.001 Score=49.21 Aligned_cols=33 Identities=30% Similarity=0.470 Sum_probs=24.3
Q ss_pred HHHHHHHHHhcCCCeEEEEechhHHHHHHHHhc
Q 021980 83 DQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVG 115 (304)
Q Consensus 83 ~~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~ 115 (304)
+.+.+.+++....++++.|||+||.+|..++..
T Consensus 52 ~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 52 DALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 444444444444579999999999999988875
No 175
>COG0627 Predicted esterase [General function prediction only]
Probab=97.05 E-value=0.002 Score=54.39 Aligned_cols=34 Identities=26% Similarity=0.521 Sum_probs=31.0
Q ss_pred CeEEEEechhHHHHHHHHhcCCcceeEEEEecCC
Q 021980 96 PAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 96 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~ 129 (304)
+-.++||||||.=|+.+|+++|+++..+...++.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~ 186 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGI 186 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceecccccc
Confidence 6789999999999999999999999999887654
No 176
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.04 E-value=0.0018 Score=51.97 Aligned_cols=38 Identities=26% Similarity=0.315 Sum_probs=31.5
Q ss_pred CCCeEEEEechhHHHHHHHHhcC----CcceeEEEEecCCCC
Q 021980 94 KEPAVLVGNSLGGFAALVAAVGL----PDQVTGVALLNSAGQ 131 (304)
Q Consensus 94 ~~~~~lvGhS~Gg~va~~~a~~~----p~~v~~lvli~~~~~ 131 (304)
.+++++.|||.||.+|...|... .++|.++...++++.
T Consensus 83 ~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 83 PGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred CCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 34699999999999999999874 468899998887653
No 177
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=96.99 E-value=0.0013 Score=46.36 Aligned_cols=36 Identities=22% Similarity=0.390 Sum_probs=23.7
Q ss_pred EEEEcCeeEEEEecC----CCCcEEEEcccCCChhhHHhc
Q 021980 13 FWTWRGHKIHYVVQG----EGSPVVLIHGFGASAFHWRYN 48 (304)
Q Consensus 13 ~~~~~g~~~~y~~~g----~g~~iv~lHG~~~~~~~~~~~ 48 (304)
.++++|.+|||.-.- +..||||+|||++|-..|..+
T Consensus 72 ~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 72 KTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp EEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHH
T ss_pred eEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhh
Confidence 456999999997643 246999999999998777554
No 178
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.86 E-value=0.008 Score=51.54 Aligned_cols=102 Identities=16% Similarity=0.067 Sum_probs=58.3
Q ss_pred CcEEEEcccCCChhhHHhchH-------HHhccCcEEEecCCCCCCCCc-chhhhchhhHHHHHHHHHHHhcCCCeEEEE
Q 021980 30 SPVVLIHGFGASAFHWRYNIP-------ELAKRYKVYAVDLLGFGWSEK-AIIEYDAMVWKDQIVDFLKEIVKEPAVLVG 101 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~~~~~~~-------~l~~~~~vi~~D~~G~G~S~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~lvG 101 (304)
|.|+++||.|-.-.....++. .|. +..+++.|+--...-+. ........+.++-...+++..+.++++|+|
T Consensus 123 pVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~LmG 201 (374)
T PF10340_consen 123 PVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNKNIILMG 201 (374)
T ss_pred cEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCCeEEEEe
Confidence 567889997654433333322 233 45888888764430000 111112222222333344455678999999
Q ss_pred echhHHHHHHHHhc--CC---cceeEEEEecCCCCC
Q 021980 102 NSLGGFAALVAAVG--LP---DQVTGVALLNSAGQF 132 (304)
Q Consensus 102 hS~Gg~va~~~a~~--~p---~~v~~lvli~~~~~~ 132 (304)
-|.||.+++.+... .+ -.-+++|+|+|....
T Consensus 202 DSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 202 DSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred cCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 99999998887652 11 124689999986543
No 179
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=96.82 E-value=0.0015 Score=53.67 Aligned_cols=39 Identities=28% Similarity=0.279 Sum_probs=32.2
Q ss_pred CcEEEEcccCCChhhHHhchHHHhc-cCcEEEecCCCCCC
Q 021980 30 SPVVLIHGFGASAFHWRYNIPELAK-RYKVYAVDLLGFGW 68 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~ 68 (304)
|.+||-||++++...|....-.|+. +|-|.++++|-+-.
T Consensus 119 PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA 158 (399)
T KOG3847|consen 119 PVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSA 158 (399)
T ss_pred cEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcc
Confidence 4577889999999999888877765 59999999987753
No 180
>KOG3101 consensus Esterase D [General function prediction only]
Probab=96.55 E-value=0.0017 Score=50.28 Aligned_cols=99 Identities=17% Similarity=0.218 Sum_probs=59.2
Q ss_pred CcEEEEcccCCChhhHHh--chHHHh--ccCcEEEecCCCCC-----CCCcc-----------------hhhhchhhHH-
Q 021980 30 SPVVLIHGFGASAFHWRY--NIPELA--KRYKVYAVDLLGFG-----WSEKA-----------------IIEYDAMVWK- 82 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~~~~--~~~~l~--~~~~vi~~D~~G~G-----~S~~~-----------------~~~~~~~~~~- 82 (304)
|++.+|-|+.+....+-. -....+ .+..||++|---.| .++.. ...|.+.+++
T Consensus 45 P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv~ 124 (283)
T KOG3101|consen 45 PVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYVV 124 (283)
T ss_pred ceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHHH
Confidence 556679999888776532 222222 24778889844333 22110 1123333322
Q ss_pred HHHHHHHHH----hcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecC
Q 021980 83 DQIVDFLKE----IVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNS 128 (304)
Q Consensus 83 ~~l~~~~~~----~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~ 128 (304)
..+.+.+.. ++..++.|.||||||.=|+..+.+.|++.+++-...|
T Consensus 125 kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAP 174 (283)
T KOG3101|consen 125 KELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAP 174 (283)
T ss_pred HHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccc
Confidence 233333331 1234689999999999999999999998888766554
No 181
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.52 E-value=0.16 Score=40.10 Aligned_cols=93 Identities=19% Similarity=0.191 Sum_probs=59.2
Q ss_pred CcEEEEcccCCChhhH---HhchHHHh-ccCcEEEecCC----CCCCCCcchhhhchhhHHHHHHHHHHHhcC----CCe
Q 021980 30 SPVVLIHGFGASAFHW---RYNIPELA-KRYKVYAVDLL----GFGWSEKAIIEYDAMVWKDQIVDFLKEIVK----EPA 97 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~~---~~~~~~l~-~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~----~~~ 97 (304)
.-+||+-|++..-... ..+...|. ..|.+|-+.++ |+|-+.-. +-++++..+++++.. .++
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk-------~D~edl~~l~~Hi~~~~fSt~v 109 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLK-------DDVEDLKCLLEHIQLCGFSTDV 109 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccccccccccc-------ccHHHHHHHHHHhhccCcccce
Confidence 3578888877654433 33444554 45888887765 45544322 223677777776643 379
Q ss_pred EEEEechhHHHHHHHHh--cCCcceeEEEEecCC
Q 021980 98 VLVGNSLGGFAALVAAV--GLPDQVTGVALLNSA 129 (304)
Q Consensus 98 ~lvGhS~Gg~va~~~a~--~~p~~v~~lvli~~~ 129 (304)
+|+|||-|.-=.+.|.. ..|..+.+.|+..|.
T Consensus 110 VL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApV 143 (299)
T KOG4840|consen 110 VLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPV 143 (299)
T ss_pred EEEecCccchHHHHHHHhccchHHHHHHHHhCcc
Confidence 99999999987777763 346666666665553
No 182
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.51 E-value=0.005 Score=49.89 Aligned_cols=36 Identities=31% Similarity=0.546 Sum_probs=32.7
Q ss_pred CCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCC
Q 021980 94 KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 94 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~ 129 (304)
.++-.++|||+||.+++.....+|+.+....+++|.
T Consensus 136 ~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 136 SERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred cccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 356899999999999999999999999999998864
No 183
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.48 E-value=0.014 Score=51.35 Aligned_cols=101 Identities=19% Similarity=0.122 Sum_probs=55.8
Q ss_pred CcEEEEccc---CCChhhHHhchHHHhcc--CcEEEecCC----------CCCCCCcchhhhchhh---HHHHHHHHHHH
Q 021980 30 SPVVLIHGF---GASAFHWRYNIPELAKR--YKVYAVDLL----------GFGWSEKAIIEYDAMV---WKDQIVDFLKE 91 (304)
Q Consensus 30 ~~iv~lHG~---~~~~~~~~~~~~~l~~~--~~vi~~D~~----------G~G~S~~~~~~~~~~~---~~~~l~~~~~~ 91 (304)
|++|+|||. ++++..-..--..|+++ +=||.+++| ..+..+....+....+ -.+.+.+-|++
T Consensus 95 PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe~ 174 (491)
T COG2272 95 PVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIEA 174 (491)
T ss_pred cEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHHHHH
Confidence 789999984 33333322233456544 445555544 2221111111111111 11345566777
Q ss_pred hcC--CCeEEEEechhHHHHHHHHhc--CCcceeEEEEecCCC
Q 021980 92 IVK--EPAVLVGNSLGGFAALVAAVG--LPDQVTGVALLNSAG 130 (304)
Q Consensus 92 ~~~--~~~~lvGhS~Gg~va~~~a~~--~p~~v~~lvli~~~~ 130 (304)
.+. ++|.|+|+|-||+.++.+.+- ....++++|+.++..
T Consensus 175 FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 175 FGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAA 217 (491)
T ss_pred hCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCC
Confidence 764 579999999999877666553 345677777776543
No 184
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.42 E-value=0.024 Score=48.63 Aligned_cols=96 Identities=18% Similarity=0.181 Sum_probs=61.9
Q ss_pred CcEEEEcccCCChhhHHh-------chHHHhccCcEEEecCCCCCCCCcch-------h--h-hchhhHHHHHHHHHHHh
Q 021980 30 SPVVLIHGFGASAFHWRY-------NIPELAKRYKVYAVDLLGFGWSEKAI-------I--E-YDAMVWKDQIVDFLKEI 92 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~~~~-------~~~~l~~~~~vi~~D~~G~G~S~~~~-------~--~-~~~~~~~~~l~~~~~~~ 92 (304)
-||+|--|.-++-+.+.. +++.+ +--+|-.++|=+|.|-+-. . . .+.++-.+|..+++..+
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~--~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~l 158 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPEL--KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFL 158 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhh--CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHH
Confidence 679998887665544432 23333 2357889999999885311 0 1 12222223444445444
Q ss_pred c------CCCeEEEEechhHHHHHHHHhcCCcceeEEEEec
Q 021980 93 V------KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLN 127 (304)
Q Consensus 93 ~------~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~ 127 (304)
. ..+++.+|-|.|||++..+-.+||..+.+...-+
T Consensus 159 K~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaS 199 (492)
T KOG2183|consen 159 KRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAAS 199 (492)
T ss_pred hhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhcc
Confidence 3 2489999999999999999999998877655433
No 185
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.39 E-value=0.0057 Score=49.49 Aligned_cols=23 Identities=35% Similarity=0.496 Sum_probs=19.7
Q ss_pred CCCeEEEEechhHHHHHHHHhcC
Q 021980 94 KEPAVLVGNSLGGFAALVAAVGL 116 (304)
Q Consensus 94 ~~~~~lvGhS~Gg~va~~~a~~~ 116 (304)
..++++.|||+||.+|..++...
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHH
Confidence 45799999999999999888753
No 186
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.25 E-value=0.01 Score=53.52 Aligned_cols=82 Identities=18% Similarity=0.155 Sum_probs=48.7
Q ss_pred hhHHhchHHHhc-cC-----cEEEecCCCCCCCCcchhhhchhhHHHHHHHHHH---Hhc-CCCeEEEEechhHHHHHHH
Q 021980 43 FHWRYNIPELAK-RY-----KVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLK---EIV-KEPAVLVGNSLGGFAALVA 112 (304)
Q Consensus 43 ~~~~~~~~~l~~-~~-----~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~---~~~-~~~~~lvGhS~Gg~va~~~ 112 (304)
..|..+++.|.+ +| ....+|+| .|..... ....+-..+.++++ .++ .+|++|+||||||.+++.+
T Consensus 156 ~vw~kLIe~L~~iGY~~~nL~gAPYDWR---ls~~~le--~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyF 230 (642)
T PLN02517 156 FVWAVLIANLARIGYEEKNMYMAAYDWR---LSFQNTE--VRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHF 230 (642)
T ss_pred eeHHHHHHHHHHcCCCCCceeecccccc---cCccchh--hhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHH
Confidence 357888888864 34 34446666 2211110 11122233333333 334 5799999999999999997
Q ss_pred HhcC---------------CcceeEEEEecCC
Q 021980 113 AVGL---------------PDQVTGVALLNSA 129 (304)
Q Consensus 113 a~~~---------------p~~v~~lvli~~~ 129 (304)
...- -..|+++|.|+++
T Consensus 231 L~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 231 MKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred HHhccccccccCCcchHHHHHHHHHheecccc
Confidence 6531 1357888888763
No 187
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.23 E-value=0.047 Score=42.57 Aligned_cols=102 Identities=26% Similarity=0.339 Sum_probs=57.1
Q ss_pred CCCcEEEEcccCC-ChhhHHh------------chHHH----hccCcEEEecCCCC---CCCCcchhhh--chhhHHHHH
Q 021980 28 EGSPVVLIHGFGA-SAFHWRY------------NIPEL----AKRYKVYAVDLLGF---GWSEKAIIEY--DAMVWKDQI 85 (304)
Q Consensus 28 ~g~~iv~lHG~~~-~~~~~~~------------~~~~l----~~~~~vi~~D~~G~---G~S~~~~~~~--~~~~~~~~l 85 (304)
+.+-+|++||.|- ....|.. ++|.. +.+|.|++..---+ -.+...+..+ +....+..+
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yv 179 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYV 179 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHH
Confidence 3456899999765 2334532 23333 45688888753211 1111111111 111111221
Q ss_pred H-HHHHHhcCCCeEEEEechhHHHHHHHHhcCCc--ceeEEEEecCC
Q 021980 86 V-DFLKEIVKEPAVLVGNSLGGFAALVAAVGLPD--QVTGVALLNSA 129 (304)
Q Consensus 86 ~-~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lvli~~~ 129 (304)
- .++.-...+.+.++.||.||...+.+..++|+ +|.++.+.+++
T Consensus 180 w~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 180 WKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 1 12233345679999999999999999999875 67777776653
No 188
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.22 E-value=0.011 Score=51.54 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=29.2
Q ss_pred cCCCeEEEEechhHHHHHHHHhcCCc--------ceeEEEEecC
Q 021980 93 VKEPAVLVGNSLGGFAALVAAVGLPD--------QVTGVALLNS 128 (304)
Q Consensus 93 ~~~~~~lvGhS~Gg~va~~~a~~~p~--------~v~~lvli~~ 128 (304)
+.+|++||+||||+.+...+...+++ .|++++.+++
T Consensus 180 G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~ 223 (473)
T KOG2369|consen 180 GGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGA 223 (473)
T ss_pred CCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCc
Confidence 34899999999999999999998876 3666666553
No 189
>PLN02162 triacylglycerol lipase
Probab=96.14 E-value=0.015 Score=51.02 Aligned_cols=32 Identities=28% Similarity=0.300 Sum_probs=23.9
Q ss_pred HHHHHHHHHhcCCCeEEEEechhHHHHHHHHh
Q 021980 83 DQIVDFLKEIVKEPAVLVGNSLGGFAALVAAV 114 (304)
Q Consensus 83 ~~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~ 114 (304)
+.+.+++.+....++++.|||+||.+|..+|.
T Consensus 266 ~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 266 QMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 44455555544568999999999999998765
No 190
>PLN00413 triacylglycerol lipase
Probab=96.02 E-value=0.018 Score=50.63 Aligned_cols=33 Identities=21% Similarity=0.363 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhcCCCeEEEEechhHHHHHHHHh
Q 021980 82 KDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAV 114 (304)
Q Consensus 82 ~~~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~ 114 (304)
.+.+.++++.....++++.|||+||.+|...|.
T Consensus 271 ~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 271 LRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 356666666655668999999999999998874
No 191
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=95.97 E-value=0.033 Score=45.98 Aligned_cols=34 Identities=32% Similarity=0.508 Sum_probs=30.1
Q ss_pred CeEEEEechhHHHHHHHHhcCCcceeEEEEecCC
Q 021980 96 PAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 96 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~ 129 (304)
.-+|+|.|+||.+++..+.+||+++-.++..++.
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps 211 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGS 211 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchhhceeeccCCc
Confidence 4579999999999999999999999988877653
No 192
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=95.82 E-value=0.063 Score=46.42 Aligned_cols=30 Identities=33% Similarity=0.470 Sum_probs=27.8
Q ss_pred CeEEEEechhHHHHHHHHhcCCcceeEEEE
Q 021980 96 PAVLVGNSLGGFAALVAAVGLPDQVTGVAL 125 (304)
Q Consensus 96 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl 125 (304)
|++++|+|.||.+|...|.-.|-.+.+++=
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iD 214 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVID 214 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEe
Confidence 899999999999999999999999988774
No 193
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=95.82 E-value=0.031 Score=42.91 Aligned_cols=50 Identities=26% Similarity=0.284 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhc-----CCCeEEEEechhHHHHHHHHhcCCcceeEEEEecCCC
Q 021980 81 WKDQIVDFLKEIV-----KEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNSAG 130 (304)
Q Consensus 81 ~~~~l~~~~~~~~-----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~~ 130 (304)
-+..|.+|++.+. .....++|||+|+.++-..+...+-.+..+|++++++
T Consensus 90 ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 90 GAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 3456677766553 2368999999999988877777677899999998765
No 194
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.79 E-value=0.0097 Score=50.95 Aligned_cols=80 Identities=23% Similarity=0.288 Sum_probs=48.6
Q ss_pred cEEEEcccCC-ChhhHHhchHHHhccCcEEEecCCCCCCCC-c--chhhhchhhHHHHHHHHHHHhcCCCeEEEEechhH
Q 021980 31 PVVLIHGFGA-SAFHWRYNIPELAKRYKVYAVDLLGFGWSE-K--AIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGG 106 (304)
Q Consensus 31 ~iv~lHG~~~-~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~-~--~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~Gg 106 (304)
-+||.||+-+ +...|...+......+--..+..+|+-+.- . .-..+--...++++.+.+....++++..+|||+||
T Consensus 82 LvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvghSLGG 161 (405)
T KOG4372|consen 82 LVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVGHSLGG 161 (405)
T ss_pred EEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeeeeecCC
Confidence 4778899855 777888887777654322244445553221 1 10111122345666666655567899999999999
Q ss_pred HHHH
Q 021980 107 FAAL 110 (304)
Q Consensus 107 ~va~ 110 (304)
.++-
T Consensus 162 Lvar 165 (405)
T KOG4372|consen 162 LVAR 165 (405)
T ss_pred eeee
Confidence 7753
No 195
>PLN02454 triacylglycerol lipase
Probab=95.74 E-value=0.018 Score=50.04 Aligned_cols=19 Identities=47% Similarity=0.555 Sum_probs=17.2
Q ss_pred eEEEEechhHHHHHHHHhc
Q 021980 97 AVLVGNSLGGFAALVAAVG 115 (304)
Q Consensus 97 ~~lvGhS~Gg~va~~~a~~ 115 (304)
+++.||||||.+|...|..
T Consensus 230 I~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 230 IVLTGHSLGASLATLAAFD 248 (414)
T ss_pred EEEEecCHHHHHHHHHHHH
Confidence 8999999999999998853
No 196
>PLN02209 serine carboxypeptidase
Probab=95.72 E-value=0.074 Score=47.31 Aligned_cols=58 Identities=21% Similarity=0.266 Sum_probs=45.4
Q ss_pred CCceEEEecCCCCCCCcHHHHHHHHhC------------------------CC-ceEEEe-CCCCCCCccChHHHHHHHH
Q 021980 236 SCPLLLLWGDLDPWVGSAKATRIKEFY------------------------PN-TTLVNF-QAGHCPHDEVPELVNKALM 289 (304)
Q Consensus 236 ~~P~lii~G~~D~~~~~~~~~~~~~~~------------------------~~-~~~~~~-~~GH~~~~e~p~~~~~~i~ 289 (304)
.+++|+..|+.|.+++.-..+.+.+.+ .+ .++..+ +|||+++ .+|++..+++.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 479999999999999887666655443 12 445556 7999996 69999999999
Q ss_pred HHHhc
Q 021980 290 DWLST 294 (304)
Q Consensus 290 ~fl~~ 294 (304)
+|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
No 197
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.71 E-value=0.06 Score=47.43 Aligned_cols=100 Identities=17% Similarity=0.234 Sum_probs=67.9
Q ss_pred CCcEEEEcccCCChhhHH----hchHHHhcc--CcEEEecCCCCCCCCcch-------hhhchhhHHHHHHHHHHHhcC-
Q 021980 29 GSPVVLIHGFGASAFHWR----YNIPELAKR--YKVYAVDLLGFGWSEKAI-------IEYDAMVWKDQIVDFLKEIVK- 94 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~~~----~~~~~l~~~--~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~l~~~~~~~~~- 94 (304)
||.-|||=|=+.-...|- ...-.++++ -.|+..++|=+|.|.+.. .-.+..+...|+.++|++++.
T Consensus 86 gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k 165 (514)
T KOG2182|consen 86 GPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAK 165 (514)
T ss_pred CceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhh
Confidence 455556655343333341 122233333 579999999999884321 123444555788888887753
Q ss_pred ------CCeEEEEechhHHHHHHHHhcCCcceeEEEEecC
Q 021980 95 ------EPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNS 128 (304)
Q Consensus 95 ------~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~ 128 (304)
.|++..|-|+-|.++..+-.++||.+.+-|.-++
T Consensus 166 ~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSa 205 (514)
T KOG2182|consen 166 FNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSA 205 (514)
T ss_pred cCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccc
Confidence 2799999999999999999999999988876543
No 198
>PLN02571 triacylglycerol lipase
Probab=95.60 E-value=0.019 Score=49.88 Aligned_cols=33 Identities=24% Similarity=0.403 Sum_probs=23.0
Q ss_pred HHHHHHHHHhcCC--CeEEEEechhHHHHHHHHhc
Q 021980 83 DQIVDFLKEIVKE--PAVLVGNSLGGFAALVAAVG 115 (304)
Q Consensus 83 ~~l~~~~~~~~~~--~~~lvGhS~Gg~va~~~a~~ 115 (304)
+++.++++..... ++++.||||||.+|...|..
T Consensus 212 ~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 212 NEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 3444444443332 58999999999999998864
No 199
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.50 E-value=0.039 Score=43.37 Aligned_cols=70 Identities=13% Similarity=0.100 Sum_probs=42.0
Q ss_pred hchHHHhccCcEEEecCCCCCCC-----Ccch----hhhchhhHHHHHHHHHHHhcC-CCeEEEEechhHHHHHHHHhcC
Q 021980 47 YNIPELAKRYKVYAVDLLGFGWS-----EKAI----IEYDAMVWKDQIVDFLKEIVK-EPAVLVGNSLGGFAALVAAVGL 116 (304)
Q Consensus 47 ~~~~~l~~~~~vi~~D~~G~G~S-----~~~~----~~~~~~~~~~~l~~~~~~~~~-~~~~lvGhS~Gg~va~~~a~~~ 116 (304)
.+...+....+|++|=+|=.... .... ......+..+....+++..+. .+|||+|||-|+++...+...+
T Consensus 37 ~qas~F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 37 NQASAFNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHhhhhhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 34445666688999877644321 1111 111112222344455666654 4899999999999999988764
No 200
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=95.45 E-value=0.068 Score=49.04 Aligned_cols=100 Identities=17% Similarity=0.138 Sum_probs=50.0
Q ss_pred CcEEEEcccCC---Ch--hhHHhchHHH-hccCcEEEecCC----CCCCCCcc--h-hhhchhhHH---HHHHHHHHHhc
Q 021980 30 SPVVLIHGFGA---SA--FHWRYNIPEL-AKRYKVYAVDLL----GFGWSEKA--I-IEYDAMVWK---DQIVDFLKEIV 93 (304)
Q Consensus 30 ~~iv~lHG~~~---~~--~~~~~~~~~l-~~~~~vi~~D~~----G~G~S~~~--~-~~~~~~~~~---~~l~~~~~~~~ 93 (304)
|++|++||.+. ++ ..+... ..+ .++.=||.+.+| |+-.+... . .++...+.. +.|.+-|...+
T Consensus 126 PV~v~ihGG~f~~G~~~~~~~~~~-~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FG 204 (535)
T PF00135_consen 126 PVMVWIHGGGFMFGSGSFPPYDGA-SLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFG 204 (535)
T ss_dssp EEEEEE--STTTSSCTTSGGGHTH-HHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGT
T ss_pred ceEEEeecccccCCCccccccccc-ccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcc
Confidence 67889998422 22 223222 222 345667777776 22122111 1 222222211 22333344444
Q ss_pred C--CCeEEEEechhHHHHHHHHhc--CCcceeEEEEecCCC
Q 021980 94 K--EPAVLVGNSLGGFAALVAAVG--LPDQVTGVALLNSAG 130 (304)
Q Consensus 94 ~--~~~~lvGhS~Gg~va~~~a~~--~p~~v~~lvli~~~~ 130 (304)
. ++|+|.|||-||..+...... ....++++|+.++..
T Consensus 205 GDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 205 GDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred cCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 3 579999999999776665554 246899999988643
No 201
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=95.37 E-value=1 Score=41.46 Aligned_cols=34 Identities=26% Similarity=0.337 Sum_probs=30.7
Q ss_pred CCeEEEEechhHHHHHHHHhcCCcceeEEEEecC
Q 021980 95 EPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNS 128 (304)
Q Consensus 95 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~ 128 (304)
+.++++|-|.||++.-..+...|++++++|+--|
T Consensus 527 ~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VP 560 (682)
T COG1770 527 DRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVP 560 (682)
T ss_pred cceEEeccCchhHHHHHHHhhChhhhhheeecCC
Confidence 4799999999999999999999999999987544
No 202
>PLN02408 phospholipase A1
Probab=95.35 E-value=0.028 Score=48.17 Aligned_cols=32 Identities=28% Similarity=0.395 Sum_probs=22.4
Q ss_pred HHHHHHHHhcCC--CeEEEEechhHHHHHHHHhc
Q 021980 84 QIVDFLKEIVKE--PAVLVGNSLGGFAALVAAVG 115 (304)
Q Consensus 84 ~l~~~~~~~~~~--~~~lvGhS~Gg~va~~~a~~ 115 (304)
.+.++++..... .+++.|||+||.+|...|..
T Consensus 187 eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 187 EIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 334444443333 48999999999999988864
No 203
>PLN02934 triacylglycerol lipase
Probab=95.22 E-value=0.028 Score=49.88 Aligned_cols=32 Identities=31% Similarity=0.462 Sum_probs=25.1
Q ss_pred HHHHHHHHHhcCCCeEEEEechhHHHHHHHHh
Q 021980 83 DQIVDFLKEIVKEPAVLVGNSLGGFAALVAAV 114 (304)
Q Consensus 83 ~~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~ 114 (304)
+.+.+++++....++++.|||+||.+|..+|.
T Consensus 309 ~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 309 SKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 45556666555568999999999999999874
No 204
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.14 E-value=0.086 Score=51.39 Aligned_cols=94 Identities=17% Similarity=0.223 Sum_probs=62.6
Q ss_pred CCCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCC-cchhhhchhhHHHHHHHHHHHhcC-CCeEEEEechh
Q 021980 28 EGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSE-KAIIEYDAMVWKDQIVDFLKEIVK-EPAVLVGNSLG 105 (304)
Q Consensus 28 ~g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~-~~~~~~~~~~~~~~l~~~~~~~~~-~~~~lvGhS~G 105 (304)
.+||+.|+|..-+.......++..| ..|.||.-. .....-+.+..+....+.+.++.. .|+.|+|.|+|
T Consensus 2122 e~~~~Ffv~pIEG~tt~l~~la~rl---------e~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GYSyG 2192 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTTALESLASRL---------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGYSYG 2192 (2376)
T ss_pred cCCceEEEeccccchHHHHHHHhhc---------CCcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeeccchh
Confidence 4789999998877765555554443 236666432 222223455566666666677654 58999999999
Q ss_pred HHHHHHHHhcC--CcceeEEEEecCCC
Q 021980 106 GFAALVAAVGL--PDQVTGVALLNSAG 130 (304)
Q Consensus 106 g~va~~~a~~~--p~~v~~lvli~~~~ 130 (304)
+.++..+|... .+....++++++.+
T Consensus 2193 ~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2193 ACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred HHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 99999999753 33455688888654
No 205
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.06 E-value=0.95 Score=33.84 Aligned_cols=79 Identities=19% Similarity=0.268 Sum_probs=50.5
Q ss_pred cEEEEcccCCChhhHHhchHHHhccCc-EEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEechhHHHH
Q 021980 31 PVVLIHGFGASAFHWRYNIPELAKRYK-VYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAA 109 (304)
Q Consensus 31 ~iv~lHG~~~~~~~~~~~~~~l~~~~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~Gg~va 109 (304)
-||..-||+..+.....++ +.+++. ++++|+...- -+++. . ..+.+.||++|||--||
T Consensus 13 LIvyFaGwgtpps~v~HLi--lpeN~dl~lcYDY~dl~------ldfDf-------s------Ay~hirlvAwSMGVwvA 71 (214)
T COG2830 13 LIVYFAGWGTPPSAVNHLI--LPENHDLLLCYDYQDLN------LDFDF-------S------AYRHIRLVAWSMGVWVA 71 (214)
T ss_pred EEEEEecCCCCHHHHhhcc--CCCCCcEEEEeehhhcC------cccch-------h------hhhhhhhhhhhHHHHHH
Confidence 5777889999876655542 234454 5778876321 11111 1 11346789999999999
Q ss_pred HHHHhcCCcceeEEEEecCCCCC
Q 021980 110 LVAAVGLPDQVTGVALLNSAGQF 132 (304)
Q Consensus 110 ~~~a~~~p~~v~~lvli~~~~~~ 132 (304)
-.+....+ +++.+.|++++..
T Consensus 72 eR~lqg~~--lksatAiNGTgLp 92 (214)
T COG2830 72 ERVLQGIR--LKSATAINGTGLP 92 (214)
T ss_pred HHHHhhcc--ccceeeecCCCCC
Confidence 88887664 6777778876643
No 206
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=95.04 E-value=0.14 Score=45.60 Aligned_cols=59 Identities=20% Similarity=0.190 Sum_probs=45.2
Q ss_pred CCceEEEecCCCCCCCcHHHHHHHHhCC------------------------C-ceEEEe-CCCCCCCccChHHHHHHHH
Q 021980 236 SCPLLLLWGDLDPWVGSAKATRIKEFYP------------------------N-TTLVNF-QAGHCPHDEVPELVNKALM 289 (304)
Q Consensus 236 ~~P~lii~G~~D~~~~~~~~~~~~~~~~------------------------~-~~~~~~-~~GH~~~~e~p~~~~~~i~ 289 (304)
..++||..|+.|.+++.-..+.+.+.+. + .+++++ +|||+++ .+|+...+++.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 4799999999999998776665543321 1 345556 7999996 69999999999
Q ss_pred HHHhcc
Q 021980 290 DWLSTV 295 (304)
Q Consensus 290 ~fl~~~ 295 (304)
+|+...
T Consensus 426 ~Fi~~~ 431 (433)
T PLN03016 426 RWISGQ 431 (433)
T ss_pred HHHcCC
Confidence 999653
No 207
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.92 E-value=0.07 Score=40.13 Aligned_cols=110 Identities=18% Similarity=0.225 Sum_probs=65.0
Q ss_pred CeeEEEEecCC-CCcEEEEcccCCChhhHHh--chHHHh----cc-CcEEEecCCCCCCCC--cchhhhchhhHHHHHHH
Q 021980 18 GHKIHYVVQGE-GSPVVLIHGFGASAFHWRY--NIPELA----KR-YKVYAVDLLGFGWSE--KAIIEYDAMVWKDQIVD 87 (304)
Q Consensus 18 g~~~~y~~~g~-g~~iv~lHG~~~~~~~~~~--~~~~l~----~~-~~vi~~D~~G~G~S~--~~~~~~~~~~~~~~l~~ 87 (304)
+..|.+...|. |.|||+..-.+++...|.. .+..|+ ++ .+.+++|-...- |- ......+-....+....
T Consensus 14 ~RdMel~ryGHaG~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~gldsE-Sf~a~h~~~adr~~rH~Ayer 92 (227)
T COG4947 14 NRDMELNRYGHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLSGLDSE-SFLATHKNAADRAERHRAYER 92 (227)
T ss_pred cchhhhhhccCCCCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEecccchH-hHhhhcCCHHHHHHHHHHHHH
Confidence 56677777784 6788888776666655543 334443 32 566776532110 00 00000000001112222
Q ss_pred H-HHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEEEecC
Q 021980 88 F-LKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVALLNS 128 (304)
Q Consensus 88 ~-~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~ 128 (304)
. +++......++-|-||||.-|..+.-++|+.+.++|.+++
T Consensus 93 Yv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSG 134 (227)
T COG4947 93 YVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSG 134 (227)
T ss_pred HHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecc
Confidence 2 3444445677889999999999999999999999998864
No 208
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.89 E-value=0.058 Score=41.76 Aligned_cols=47 Identities=23% Similarity=0.343 Sum_probs=33.9
Q ss_pred HHHHHHHHHhcCCCeEEEEechhHHHHHHHHhc------CCcceeEEEEecCC
Q 021980 83 DQIVDFLKEIVKEPAVLVGNSLGGFAALVAAVG------LPDQVTGVALLNSA 129 (304)
Q Consensus 83 ~~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~------~p~~v~~lvli~~~ 129 (304)
+.+.+....-...+++|+|+|.|++|+..++.. ..++|.++++++.+
T Consensus 69 ~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP 121 (179)
T PF01083_consen 69 RLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDP 121 (179)
T ss_dssp HHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-T
T ss_pred HHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCC
Confidence 333333333334589999999999999998876 35789999998754
No 209
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=94.84 E-value=0.087 Score=43.90 Aligned_cols=64 Identities=25% Similarity=0.298 Sum_probs=46.5
Q ss_pred hccCC-CceEEEecCCCCCCCcHHHHHHHHhCCC--ceEEEe-CCCCCCCccChH---HHHHHHHHHHhcc
Q 021980 232 LSKLS-CPLLLLWGDLDPWVGSAKATRIKEFYPN--TTLVNF-QAGHCPHDEVPE---LVNKALMDWLSTV 295 (304)
Q Consensus 232 l~~i~-~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~-~~GH~~~~e~p~---~~~~~i~~fl~~~ 295 (304)
+..+. +|+|+++|+.|..+|...++.+.+.... .+...+ +++|......+. +..+.+.+|+.+.
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 34455 7999999999999999888877766655 344444 688987764444 5677788887653
No 210
>PLN02324 triacylglycerol lipase
Probab=94.79 E-value=0.049 Score=47.39 Aligned_cols=32 Identities=22% Similarity=0.412 Sum_probs=22.1
Q ss_pred HHHHHHHHhcCC--CeEEEEechhHHHHHHHHhc
Q 021980 84 QIVDFLKEIVKE--PAVLVGNSLGGFAALVAAVG 115 (304)
Q Consensus 84 ~l~~~~~~~~~~--~~~lvGhS~Gg~va~~~a~~ 115 (304)
.|.++++..... .+++.|||+||.+|...|..
T Consensus 202 eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 202 ELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 344444443332 58999999999999988853
No 211
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=94.66 E-value=0.21 Score=40.32 Aligned_cols=76 Identities=24% Similarity=0.267 Sum_probs=46.8
Q ss_pred hhHHhchHHHhc-cCcEEEecCCCCCCCCcchhhhchhhHHHH-------HHHHHHH-hcC----CCeEEEEechhHHHH
Q 021980 43 FHWRYNIPELAK-RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQ-------IVDFLKE-IVK----EPAVLVGNSLGGFAA 109 (304)
Q Consensus 43 ~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~-------l~~~~~~-~~~----~~~~lvGhS~Gg~va 109 (304)
-.|+.+++.|++ +|.|+|.-+.- | ++....|+. +.+.+.. .+. -|++-+|||||+-+-
T Consensus 34 itYr~lLe~La~~Gy~ViAtPy~~-t--------fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklh 104 (250)
T PF07082_consen 34 ITYRYLLERLADRGYAVIATPYVV-T--------FDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLH 104 (250)
T ss_pred HHHHHHHHHHHhCCcEEEEEecCC-C--------CcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHH
Confidence 468999999864 69999975531 1 111111211 1122222 111 267889999999998
Q ss_pred HHHHhcCCcceeEEEEec
Q 021980 110 LVAAVGLPDQVTGVALLN 127 (304)
Q Consensus 110 ~~~a~~~p~~v~~lvli~ 127 (304)
+.+...++...++.++++
T Consensus 105 lLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 105 LLIGSLFDVERAGNILIS 122 (250)
T ss_pred HHHhhhccCcccceEEEe
Confidence 888887765556667765
No 212
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=94.59 E-value=0.057 Score=46.06 Aligned_cols=37 Identities=30% Similarity=0.460 Sum_probs=28.0
Q ss_pred cCCCeEEEEechhHHHHHHHHhcCCc-----ceeEEEEecCC
Q 021980 93 VKEPAVLVGNSLGGFAALVAAVGLPD-----QVTGVALLNSA 129 (304)
Q Consensus 93 ~~~~~~lvGhS~Gg~va~~~a~~~p~-----~v~~lvli~~~ 129 (304)
+..|++|+|||+|+.+.+.......+ .|+.+++++++
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gap 259 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAP 259 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCC
Confidence 34589999999999998876654333 48889988753
No 213
>PLN02310 triacylglycerol lipase
Probab=94.59 E-value=0.056 Score=46.97 Aligned_cols=20 Identities=40% Similarity=0.552 Sum_probs=17.5
Q ss_pred CeEEEEechhHHHHHHHHhc
Q 021980 96 PAVLVGNSLGGFAALVAAVG 115 (304)
Q Consensus 96 ~~~lvGhS~Gg~va~~~a~~ 115 (304)
++++.|||+||.+|...|..
T Consensus 210 sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 210 SLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred eEEEEcccHHHHHHHHHHHH
Confidence 68999999999999888853
No 214
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.39 E-value=0.17 Score=43.18 Aligned_cols=59 Identities=20% Similarity=0.190 Sum_probs=44.9
Q ss_pred CCceEEEecCCCCCCCcHHHHHHHHhCC------------------------C-ceEEEe-CCCCCCCccChHHHHHHHH
Q 021980 236 SCPLLLLWGDLDPWVGSAKATRIKEFYP------------------------N-TTLVNF-QAGHCPHDEVPELVNKALM 289 (304)
Q Consensus 236 ~~P~lii~G~~D~~~~~~~~~~~~~~~~------------------------~-~~~~~~-~~GH~~~~e~p~~~~~~i~ 289 (304)
.+++||..|+.|.+++.-..+.+.+.+. + ..+.++ +|||+++ .+|+...+++.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4799999999998888766655543321 2 345555 7999996 69999999999
Q ss_pred HHHhcc
Q 021980 290 DWLSTV 295 (304)
Q Consensus 290 ~fl~~~ 295 (304)
+|+...
T Consensus 312 ~fi~~~ 317 (319)
T PLN02213 312 RWISGQ 317 (319)
T ss_pred HHHcCC
Confidence 999653
No 215
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=94.34 E-value=0.051 Score=33.89 Aligned_cols=34 Identities=29% Similarity=0.391 Sum_probs=18.4
Q ss_pred cEEEEcCeeEEEEec--C--------CCCcEEEEcccCCChhhH
Q 021980 12 NFWTWRGHKIHYVVQ--G--------EGSPVVLIHGFGASAFHW 45 (304)
Q Consensus 12 ~~~~~~g~~~~y~~~--g--------~g~~iv~lHG~~~~~~~~ 45 (304)
.-.|-||.-+...+. + .++||+|.||+.+++..|
T Consensus 16 ~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 16 EVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp EEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred EEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 445677877665432 1 246788999999999988
No 216
>PLN02802 triacylglycerol lipase
Probab=94.23 E-value=0.072 Score=47.41 Aligned_cols=32 Identities=22% Similarity=0.308 Sum_probs=22.1
Q ss_pred HHHHHHHHhcC--CCeEEEEechhHHHHHHHHhc
Q 021980 84 QIVDFLKEIVK--EPAVLVGNSLGGFAALVAAVG 115 (304)
Q Consensus 84 ~l~~~~~~~~~--~~~~lvGhS~Gg~va~~~a~~ 115 (304)
.+.++++.... ..+++.|||+||.+|...|..
T Consensus 317 eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 317 EVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 33444444332 258999999999999987764
No 217
>PLN02753 triacylglycerol lipase
Probab=93.92 E-value=0.089 Score=47.03 Aligned_cols=20 Identities=35% Similarity=0.529 Sum_probs=17.8
Q ss_pred CCeEEEEechhHHHHHHHHh
Q 021980 95 EPAVLVGNSLGGFAALVAAV 114 (304)
Q Consensus 95 ~~~~lvGhS~Gg~va~~~a~ 114 (304)
.++++.|||+||.+|...|.
T Consensus 312 ~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 312 LSITVTGHSLGGALAILSAY 331 (531)
T ss_pred ceEEEEccCHHHHHHHHHHH
Confidence 37899999999999999885
No 218
>PLN03037 lipase class 3 family protein; Provisional
Probab=93.74 E-value=0.1 Score=46.66 Aligned_cols=19 Identities=42% Similarity=0.613 Sum_probs=17.1
Q ss_pred CeEEEEechhHHHHHHHHh
Q 021980 96 PAVLVGNSLGGFAALVAAV 114 (304)
Q Consensus 96 ~~~lvGhS~Gg~va~~~a~ 114 (304)
++++.|||+||.+|...|.
T Consensus 319 SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 319 SLTITGHSLGGALALLNAY 337 (525)
T ss_pred eEEEeccCHHHHHHHHHHH
Confidence 5899999999999988875
No 219
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=93.59 E-value=0.77 Score=41.77 Aligned_cols=113 Identities=17% Similarity=0.096 Sum_probs=67.3
Q ss_pred EEEcCeeEEEEecC------CCCcEEEEcc-cCCChh-hHHhchHH-HhccCcEEEecCCCCCCCCcc--------hhhh
Q 021980 14 WTWRGHKIHYVVQG------EGSPVVLIHG-FGASAF-HWRYNIPE-LAKRYKVYAVDLLGFGWSEKA--------IIEY 76 (304)
Q Consensus 14 ~~~~g~~~~y~~~g------~g~~iv~lHG-~~~~~~-~~~~~~~~-l~~~~~vi~~D~~G~G~S~~~--------~~~~ 76 (304)
.+-||++|.|...+ ++|++|.--| |.-+.. .|..+... |.++..-+.-..||=|.=... ..+.
T Consensus 400 tSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~ 479 (648)
T COG1505 400 TSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQN 479 (648)
T ss_pred EcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchh
Confidence 46889999997764 2456665544 222221 23333333 456666777889997743211 1111
Q ss_pred chhhHHHHHHHHHHHhcC---CCeEEEEechhHHHHHHHHhcCCcceeEEEEec
Q 021980 77 DAMVWKDQIVDFLKEIVK---EPAVLVGNSLGGFAALVAAVGLPDQVTGVALLN 127 (304)
Q Consensus 77 ~~~~~~~~l~~~~~~~~~---~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~ 127 (304)
..+++++-..++++. ++ +++-+-|-|=||.+.-....++||.+.++|+--
T Consensus 480 vfdDf~AVaedLi~r-gitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~ev 532 (648)
T COG1505 480 VFDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEV 532 (648)
T ss_pred hhHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceEEEeeeccChhhhCceeecc
Confidence 222233222233322 33 357899999999998888889999999888643
No 220
>PLN02719 triacylglycerol lipase
Probab=93.56 E-value=0.11 Score=46.30 Aligned_cols=19 Identities=37% Similarity=0.588 Sum_probs=17.3
Q ss_pred CeEEEEechhHHHHHHHHh
Q 021980 96 PAVLVGNSLGGFAALVAAV 114 (304)
Q Consensus 96 ~~~lvGhS~Gg~va~~~a~ 114 (304)
++++.|||+||.+|...|.
T Consensus 299 sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 299 SITVTGHSLGGALAVLSAY 317 (518)
T ss_pred eEEEecCcHHHHHHHHHHH
Confidence 6899999999999999875
No 221
>PLN02209 serine carboxypeptidase
Probab=93.52 E-value=0.28 Score=43.71 Aligned_cols=117 Identities=19% Similarity=0.241 Sum_probs=67.7
Q ss_pred cEEEEc---CeeEEEEecC------CCCcEEEEcccCCChhhHHhch---H-------------H-------HhccCcEE
Q 021980 12 NFWTWR---GHKIHYVVQG------EGSPVVLIHGFGASAFHWRYNI---P-------------E-------LAKRYKVY 59 (304)
Q Consensus 12 ~~~~~~---g~~~~y~~~g------~g~~iv~lHG~~~~~~~~~~~~---~-------------~-------l~~~~~vi 59 (304)
.|.+++ +..++|.-.. +.|.+++|-|.++++..+-... | . +.+...++
T Consensus 42 Gy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anll 121 (437)
T PLN02209 42 GYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANII 121 (437)
T ss_pred EEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEE
Confidence 466665 4567765432 1356778999888776552211 0 1 12236789
Q ss_pred Eec-CCCCCCCCcchh-h-hchhhHHHHHHHHHHHh-------cCCCeEEEEechhHHHHHHHHhc----C------Ccc
Q 021980 60 AVD-LLGFGWSEKAII-E-YDAMVWKDQIVDFLKEI-------VKEPAVLVGNSLGGFAALVAAVG----L------PDQ 119 (304)
Q Consensus 60 ~~D-~~G~G~S~~~~~-~-~~~~~~~~~l~~~~~~~-------~~~~~~lvGhS~Gg~va~~~a~~----~------p~~ 119 (304)
-+| ..|.|.|..... . .+.+..++++.+++... ...+++|.|.|+||..+-.+|.. . +=.
T Consensus 122 fiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~in 201 (437)
T PLN02209 122 FLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPIN 201 (437)
T ss_pred EecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCcee
Confidence 999 778898853211 1 11122345555555432 23589999999999765555542 1 124
Q ss_pred eeEEEEecC
Q 021980 120 VTGVALLNS 128 (304)
Q Consensus 120 v~~lvli~~ 128 (304)
++++++.++
T Consensus 202 l~Gi~igng 210 (437)
T PLN02209 202 LQGYVLGNP 210 (437)
T ss_pred eeeEEecCc
Confidence 667777665
No 222
>PLN02847 triacylglycerol lipase
Probab=93.50 E-value=0.096 Score=47.51 Aligned_cols=21 Identities=33% Similarity=0.297 Sum_probs=18.4
Q ss_pred CCeEEEEechhHHHHHHHHhc
Q 021980 95 EPAVLVGNSLGGFAALVAAVG 115 (304)
Q Consensus 95 ~~~~lvGhS~Gg~va~~~a~~ 115 (304)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 478999999999999988764
No 223
>PLN02761 lipase class 3 family protein
Probab=93.38 E-value=0.13 Score=46.02 Aligned_cols=19 Identities=42% Similarity=0.539 Sum_probs=17.1
Q ss_pred CeEEEEechhHHHHHHHHh
Q 021980 96 PAVLVGNSLGGFAALVAAV 114 (304)
Q Consensus 96 ~~~lvGhS~Gg~va~~~a~ 114 (304)
++++.|||+||.+|...|.
T Consensus 295 sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 295 SITVTGHSLGASLALVSAY 313 (527)
T ss_pred eEEEeccchHHHHHHHHHH
Confidence 5899999999999998774
No 224
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=93.37 E-value=0.35 Score=43.05 Aligned_cols=117 Identities=19% Similarity=0.223 Sum_probs=66.7
Q ss_pred cEEEEc---CeeEEEEecC------CCCcEEEEcccCCChhhH---HhchH-------------HH-------hccCcEE
Q 021980 12 NFWTWR---GHKIHYVVQG------EGSPVVLIHGFGASAFHW---RYNIP-------------EL-------AKRYKVY 59 (304)
Q Consensus 12 ~~~~~~---g~~~~y~~~g------~g~~iv~lHG~~~~~~~~---~~~~~-------------~l-------~~~~~vi 59 (304)
.|.+++ +..++|.-.. +.|.|+++-|.++++..+ ...-| .+ .+...++
T Consensus 40 Gy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anll 119 (433)
T PLN03016 40 GYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANII 119 (433)
T ss_pred EEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEE
Confidence 466775 4667765432 135677899987766532 21111 11 2336899
Q ss_pred Eec-CCCCCCCCcchh-hhc-hhhHHHHHHHHHHHh-------cCCCeEEEEechhHHHHHHHHhc----C------Ccc
Q 021980 60 AVD-LLGFGWSEKAII-EYD-AMVWKDQIVDFLKEI-------VKEPAVLVGNSLGGFAALVAAVG----L------PDQ 119 (304)
Q Consensus 60 ~~D-~~G~G~S~~~~~-~~~-~~~~~~~l~~~~~~~-------~~~~~~lvGhS~Gg~va~~~a~~----~------p~~ 119 (304)
.+| ..|.|-|..... ... ....++++.+++... ...+++|.|.|.||..+-.+|.. . +-.
T Consensus 120 fiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~in 199 (433)
T PLN03016 120 FLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPIN 199 (433)
T ss_pred EecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCccc
Confidence 999 779998853211 111 112234444444332 24589999999999765555542 1 225
Q ss_pred eeEEEEecC
Q 021980 120 VTGVALLNS 128 (304)
Q Consensus 120 v~~lvli~~ 128 (304)
++++++-++
T Consensus 200 LkGi~iGNg 208 (433)
T PLN03016 200 LQGYMLGNP 208 (433)
T ss_pred ceeeEecCC
Confidence 667777665
No 225
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=93.32 E-value=0.28 Score=42.27 Aligned_cols=73 Identities=22% Similarity=0.210 Sum_probs=49.0
Q ss_pred EEEEcccCCChhhHHhchHHHhc-cCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHH----hcCCCeEEEEechhH
Q 021980 32 VVLIHGFGASAFHWRYNIPELAK-RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKE----IVKEPAVLVGNSLGG 106 (304)
Q Consensus 32 iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~lvGhS~Gg 106 (304)
.||.-|=|+....=+.+...|++ ++.||-+|-.=|=+|.+.+. ..++|+...++. -+.+++.|+|+|+|+
T Consensus 263 av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtPe-----~~a~Dl~r~i~~y~~~w~~~~~~liGySfGA 337 (456)
T COG3946 263 AVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSERTPE-----QIAADLSRLIRFYARRWGAKRVLLIGYSFGA 337 (456)
T ss_pred EEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccCCHH-----HHHHHHHHHHHHHHHhhCcceEEEEeecccc
Confidence 45666655544444556677754 59999999766777765432 345565555544 456799999999998
Q ss_pred HHH
Q 021980 107 FAA 109 (304)
Q Consensus 107 ~va 109 (304)
=+-
T Consensus 338 Dvl 340 (456)
T COG3946 338 DVL 340 (456)
T ss_pred hhh
Confidence 554
No 226
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=93.27 E-value=0.4 Score=42.64 Aligned_cols=100 Identities=19% Similarity=0.176 Sum_probs=59.3
Q ss_pred CCcEEEEcccCCChhhHHhchH--------H-----------HhccCcEEEec-CCCCCCCCc--chhh-------hchh
Q 021980 29 GSPVVLIHGFGASAFHWRYNIP--------E-----------LAKRYKVYAVD-LLGFGWSEK--AIIE-------YDAM 79 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~~~~~~~--------~-----------l~~~~~vi~~D-~~G~G~S~~--~~~~-------~~~~ 79 (304)
.|.++++.|.++++..|-.+.+ . +.+.-.+|-+| .-|-|-|.. +... .+..
T Consensus 101 rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~~ 180 (498)
T COG2939 101 RPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDVY 180 (498)
T ss_pred CceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchhHH
Confidence 3567889999888877644311 0 11123688999 778898863 1111 1222
Q ss_pred hHHHHHHHHHHHhcC--CCeEEEEechhHHHHHHHHhcCCc---ceeEEEEecC
Q 021980 80 VWKDQIVDFLKEIVK--EPAVLVGNSLGGFAALVAAVGLPD---QVTGVALLNS 128 (304)
Q Consensus 80 ~~~~~l~~~~~~~~~--~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lvli~~ 128 (304)
.+.+.+.+.+.+... .+.+|+|-|+||.-+..+|...-+ ..++++.+.+
T Consensus 181 ~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlss 234 (498)
T COG2939 181 SFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSS 234 (498)
T ss_pred HHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeee
Confidence 222333333444433 489999999999988888875433 2445555543
No 227
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=91.63 E-value=0.54 Score=40.13 Aligned_cols=72 Identities=22% Similarity=0.311 Sum_probs=43.4
Q ss_pred cEEEecCC-CCCCCCcch-hhh-chhhHHHHHHHHHHHh-------cCCCeEEEEechhHHHHHHHHhc----C------
Q 021980 57 KVYAVDLL-GFGWSEKAI-IEY-DAMVWKDQIVDFLKEI-------VKEPAVLVGNSLGGFAALVAAVG----L------ 116 (304)
Q Consensus 57 ~vi~~D~~-G~G~S~~~~-~~~-~~~~~~~~l~~~~~~~-------~~~~~~lvGhS~Gg~va~~~a~~----~------ 116 (304)
.++.+|.| |-|-|.... ..+ +....++++..++... ...+++|.|-|.||..+-.+|.. .
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 58899988 889885321 111 1112335555554432 24589999999999766555542 1
Q ss_pred CcceeEEEEecC
Q 021980 117 PDQVTGVALLNS 128 (304)
Q Consensus 117 p~~v~~lvli~~ 128 (304)
+=.++++++-++
T Consensus 83 ~inLkGi~IGNg 94 (319)
T PLN02213 83 PINLQGYMLGNP 94 (319)
T ss_pred ceeeeEEEeCCC
Confidence 124667777554
No 228
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=91.58 E-value=0.6 Score=41.60 Aligned_cols=60 Identities=20% Similarity=0.145 Sum_probs=45.1
Q ss_pred CCceEEEecCCCCCCCcHHHHHHHHhC-------------------------CCceEEEe-CCCCCCCccChHHHHHHHH
Q 021980 236 SCPLLLLWGDLDPWVGSAKATRIKEFY-------------------------PNTTLVNF-QAGHCPHDEVPELVNKALM 289 (304)
Q Consensus 236 ~~P~lii~G~~D~~~~~~~~~~~~~~~-------------------------~~~~~~~~-~~GH~~~~e~p~~~~~~i~ 289 (304)
..+++|..|+.|.++|.-..+.+-+.. .+..+.++ +|||++..++|+..-.++.
T Consensus 363 ~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~ 442 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQ 442 (454)
T ss_pred ceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHH
Confidence 379999999999999876555432111 11223556 7999999999999999999
Q ss_pred HHHhcc
Q 021980 290 DWLSTV 295 (304)
Q Consensus 290 ~fl~~~ 295 (304)
.||...
T Consensus 443 ~fl~g~ 448 (454)
T KOG1282|consen 443 RFLNGQ 448 (454)
T ss_pred HHHcCC
Confidence 999754
No 229
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=91.48 E-value=0.29 Score=42.06 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhcCCCeEEEEechhHHHHHHHHh
Q 021980 81 WKDQIVDFLKEIVKEPAVLVGNSLGGFAALVAAV 114 (304)
Q Consensus 81 ~~~~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~ 114 (304)
+.+.+..+++....-.+.+-|||+||.+|...|.
T Consensus 157 ~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~ 190 (336)
T KOG4569|consen 157 LDAELRRLIELYPNYSIWVTGHSLGGALASLAAL 190 (336)
T ss_pred HHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHH
Confidence 3355555555555557899999999999988775
No 230
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=91.43 E-value=0.19 Score=45.86 Aligned_cols=32 Identities=22% Similarity=0.221 Sum_probs=28.9
Q ss_pred CCeEEEEechhHHHHHHHHhcCCcceeEEEEe
Q 021980 95 EPAVLVGNSLGGFAALVAAVGLPDQVTGVALL 126 (304)
Q Consensus 95 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvli 126 (304)
.+..+.|.|-||.++...+.++|+++.++|+-
T Consensus 549 ~kL~i~G~SaGGlLvga~iN~rPdLF~avia~ 580 (712)
T KOG2237|consen 549 SKLAIEGGSAGGLLVGACINQRPDLFGAVIAK 580 (712)
T ss_pred cceeEecccCccchhHHHhccCchHhhhhhhc
Confidence 47899999999999999999999999988864
No 231
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.58 E-value=0.45 Score=43.11 Aligned_cols=32 Identities=25% Similarity=0.481 Sum_probs=21.2
Q ss_pred HHHHHHHHHhcC---CCeEEEEechhHHHHHHHHh
Q 021980 83 DQIVDFLKEIVK---EPAVLVGNSLGGFAALVAAV 114 (304)
Q Consensus 83 ~~l~~~~~~~~~---~~~~lvGhS~Gg~va~~~a~ 114 (304)
+.+.+.+.+.++ .+++.+||||||.++=.+..
T Consensus 511 ~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLl 545 (697)
T KOG2029|consen 511 NELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLL 545 (697)
T ss_pred HHHHHHHHHhccCCCCceEEEecccchHHHHHHHH
Confidence 344444444433 47999999999988765544
No 232
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=89.84 E-value=2.6 Score=37.69 Aligned_cols=117 Identities=18% Similarity=0.157 Sum_probs=66.6
Q ss_pred cEEEEc---CeeEEEEecCC------CCcEEEEcccCCChhhHHhchHH-------------------HhccCcEEEecC
Q 021980 12 NFWTWR---GHKIHYVVQGE------GSPVVLIHGFGASAFHWRYNIPE-------------------LAKRYKVYAVDL 63 (304)
Q Consensus 12 ~~~~~~---g~~~~y~~~g~------g~~iv~lHG~~~~~~~~~~~~~~-------------------l~~~~~vi~~D~ 63 (304)
.|++++ +..++|.-... .|.||+|-|.++.+..- -.... +.+.-.++-+|.
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~ 125 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQ 125 (454)
T ss_pred ceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEec
Confidence 578877 78899864331 34567799987755321 11111 112235788885
Q ss_pred C-CCCCCCcch---hhhchhhHHHHHHHHHHHh-------cCCCeEEEEechhHHHHHHHH----hcC------CcceeE
Q 021980 64 L-GFGWSEKAI---IEYDAMVWKDQIVDFLKEI-------VKEPAVLVGNSLGGFAALVAA----VGL------PDQVTG 122 (304)
Q Consensus 64 ~-G~G~S~~~~---~~~~~~~~~~~l~~~~~~~-------~~~~~~lvGhS~Gg~va~~~a----~~~------p~~v~~ 122 (304)
| |-|.|-... ...+-...|++..+++... ...++.|.|-|.+|...-.+| ... +-.+++
T Consensus 126 PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG 205 (454)
T KOG1282|consen 126 PVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKG 205 (454)
T ss_pred CCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceE
Confidence 5 778774321 1122333455655555432 346899999999996544444 332 235677
Q ss_pred EEEecCC
Q 021980 123 VALLNSA 129 (304)
Q Consensus 123 lvli~~~ 129 (304)
+++=++.
T Consensus 206 ~~IGNg~ 212 (454)
T KOG1282|consen 206 YAIGNGL 212 (454)
T ss_pred EEecCcc
Confidence 7775553
No 233
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=87.89 E-value=1.9 Score=34.70 Aligned_cols=33 Identities=18% Similarity=0.211 Sum_probs=23.0
Q ss_pred HHHHHHHHHh--cCCCeEEEEechhHHHHHHHHhc
Q 021980 83 DQIVDFLKEI--VKEPAVLVGNSLGGFAALVAAVG 115 (304)
Q Consensus 83 ~~l~~~~~~~--~~~~~~lvGhS~Gg~va~~~a~~ 115 (304)
+.+.+.+... ..++++++|+|.|+.++...+.+
T Consensus 34 ~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 34 ANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred HHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 3444444331 34689999999999998887764
No 234
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=87.83 E-value=5.9 Score=34.11 Aligned_cols=66 Identities=14% Similarity=0.179 Sum_probs=51.3
Q ss_pred ccCCCceEEEecCCCCCCCcHHHHHHHHhCCCceE-EEe-CCCCCCCccChHHHHHHHHHHHhccCCCCcc
Q 021980 233 SKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTL-VNF-QAGHCPHDEVPELVNKALMDWLSTVKPQASL 301 (304)
Q Consensus 233 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~-~~~-~~GH~~~~e~p~~~~~~i~~fl~~~~~~~~~ 301 (304)
.++..|-.++-|..|.+..+..+...-...|+.+. ..+ +..|.. .++.+.+.+..|+.+-.-.+++
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~---~n~~i~esl~~flnrfq~~~~L 393 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNL---INQFIKESLEPFLNRFQMYPKL 393 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchh---hHHHHHHHHHHHHHHHhcCCCC
Confidence 56789999999999999999999988899998765 344 577864 4677778888888765555544
No 235
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=87.10 E-value=2.2 Score=39.38 Aligned_cols=44 Identities=11% Similarity=0.117 Sum_probs=29.6
Q ss_pred HHHHHHhc--CCCeEEEEechhHHHHHHHHhc--CCcceeEEEEecCC
Q 021980 86 VDFLKEIV--KEPAVLVGNSLGGFAALVAAVG--LPDQVTGVALLNSA 129 (304)
Q Consensus 86 ~~~~~~~~--~~~~~lvGhS~Gg~va~~~a~~--~p~~v~~lvli~~~ 129 (304)
.+-|...+ .++++|+|||.||..+..+... ...++.+.|..++.
T Consensus 184 ~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 184 KDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred HHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 34444444 4679999999999988776653 23556666766554
No 236
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=85.89 E-value=3.2 Score=37.07 Aligned_cols=104 Identities=19% Similarity=0.187 Sum_probs=61.5
Q ss_pred cEEEEcCee-EEEEecCC-CCc-EEEEcccCC-ChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHH
Q 021980 12 NFWTWRGHK-IHYVVQGE-GSP-VVLIHGFGA-SAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVD 87 (304)
Q Consensus 12 ~~~~~~g~~-~~y~~~g~-g~~-iv~lHG~~~-~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~ 87 (304)
++..-.+.. ++|-..|+ +|| .|..-|+-. -+..--.+...|..=| ++.=|.|=-|.+-....+.......+-+.+
T Consensus 269 r~~D~~reEi~yYFnPGD~KPPL~VYFSGyR~aEGFEgy~MMk~Lg~Pf-LL~~DpRleGGaFYlGs~eyE~~I~~~I~~ 347 (511)
T TIGR03712 269 RLVDSKRQEFIYYFNPGDFKPPLNVYFSGYRPAEGFEGYFMMKRLGAPF-LLIGDPRLEGGAFYLGSDEYEQGIINVIQE 347 (511)
T ss_pred eEecCCCCeeEEecCCcCCCCCeEEeeccCcccCcchhHHHHHhcCCCe-EEeeccccccceeeeCcHHHHHHHHHHHHH
Confidence 444434444 44556676 566 567888733 2221123334442212 455588877776432111112334466677
Q ss_pred HHHHhcCC--CeEEEEechhHHHHHHHHhcC
Q 021980 88 FLKEIVKE--PAVLVGNSLGGFAALVAAVGL 116 (304)
Q Consensus 88 ~~~~~~~~--~~~lvGhS~Gg~va~~~a~~~ 116 (304)
.++.++-+ +.+|-|-|||..-|+.|++..
T Consensus 348 ~L~~LgF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 348 KLDYLGFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred HHHHhCCCHHHeeeccccccchhhhhhcccC
Confidence 77888764 689999999999999999874
No 237
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=84.34 E-value=2.1 Score=37.39 Aligned_cols=98 Identities=18% Similarity=0.177 Sum_probs=67.6
Q ss_pred CCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhh---chhhHHHHHHHHHHHh---cCCCeEEEEe
Q 021980 29 GSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEY---DAMVWKDQIVDFLKEI---VKEPAVLVGN 102 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~---~~~~~~~~l~~~~~~~---~~~~~~lvGh 102 (304)
.|+|+..-|.+.+..-.+.-...|- +-+-+.+++|=+|.|.+.+.++ ++.+-|+|....++++ -.++.+=-|-
T Consensus 63 rPtV~~T~GY~~~~~p~r~Ept~Ll-d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWISTG~ 141 (448)
T PF05576_consen 63 RPTVLYTEGYNVSTSPRRSEPTQLL-DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWISTGG 141 (448)
T ss_pred CCeEEEecCcccccCccccchhHhh-ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCceecCc
Confidence 4666677787776543332222232 2345788999999997654433 4455556666555544 4578999999
Q ss_pred chhHHHHHHHHhcCCcceeEEEEec
Q 021980 103 SLGGFAALVAAVGLPDQVTGVALLN 127 (304)
Q Consensus 103 S~Gg~va~~~a~~~p~~v~~lvli~ 127 (304)
|=|||-++.+-.-||+.|.+.|.--
T Consensus 142 SKGGmTa~y~rrFyP~DVD~tVaYV 166 (448)
T PF05576_consen 142 SKGGMTAVYYRRFYPDDVDGTVAYV 166 (448)
T ss_pred CCCceeEEEEeeeCCCCCCeeeeee
Confidence 9999999999999999999877643
No 238
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=84.15 E-value=24 Score=29.59 Aligned_cols=98 Identities=15% Similarity=0.199 Sum_probs=64.8
Q ss_pred cEEEEccc-CCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEechh----
Q 021980 31 PVVLIHGF-GASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLG---- 105 (304)
Q Consensus 31 ~iv~lHG~-~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~G---- 105 (304)
.+|.+--+ |..+..-+..++.|-....|+.-|+-.--.-+-....++..+|.+.+.+++..++.+ .++++-.--
T Consensus 105 kvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~vPv 183 (415)
T COG4553 105 KVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQPTVPV 183 (415)
T ss_pred eEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEecCCchH
Confidence 34444444 444555677778887778899988875433222334678889999999999998876 455544322
Q ss_pred -HHHHHHHHhcCCcceeEEEEecCC
Q 021980 106 -GFAALVAAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 106 -g~va~~~a~~~p~~v~~lvli~~~ 129 (304)
+.+++.-+...|..-+++++++++
T Consensus 184 LAAisLM~~~~~p~~PssMtlmGgP 208 (415)
T COG4553 184 LAAISLMEEDGDPNVPSSMTLMGGP 208 (415)
T ss_pred HHHHHHHHhcCCCCCCceeeeecCc
Confidence 334444455678888899998764
No 239
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=81.78 E-value=14 Score=25.39 Aligned_cols=81 Identities=16% Similarity=0.201 Sum_probs=47.5
Q ss_pred HHhchHHHhcc-CcEEEecCCCCCCCCcchhhhchh-hHHHHHHHHHHHhcCCCeEEEEechh--HHHHHHHHhcCCcce
Q 021980 45 WRYNIPELAKR-YKVYAVDLLGFGWSEKAIIEYDAM-VWKDQIVDFLKEIVKEPAVLVGNSLG--GFAALVAAVGLPDQV 120 (304)
Q Consensus 45 ~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~lvGhS~G--g~va~~~a~~~p~~v 120 (304)
|..+.+.+..+ +-.=.+.++.+|.+-......... .=...+.++++.....+++|||-|=- --+-..+|.++|++|
T Consensus 13 y~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~i 92 (100)
T PF09949_consen 13 YPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGRI 92 (100)
T ss_pred HHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCCE
Confidence 44455555433 544456666666553221111111 11245666677777789999997722 245667888999999
Q ss_pred eEEEE
Q 021980 121 TGVAL 125 (304)
Q Consensus 121 ~~lvl 125 (304)
.++.+
T Consensus 93 ~ai~I 97 (100)
T PF09949_consen 93 LAIYI 97 (100)
T ss_pred EEEEE
Confidence 98764
No 240
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=79.27 E-value=2.4 Score=34.98 Aligned_cols=23 Identities=30% Similarity=0.433 Sum_probs=19.9
Q ss_pred CCCeEEEEechhHHHHHHHHhcC
Q 021980 94 KEPAVLVGNSLGGFAALVAAVGL 116 (304)
Q Consensus 94 ~~~~~lvGhS~Gg~va~~~a~~~ 116 (304)
..++.|-|||+||.+|..+...+
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 275 DARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CceEEEeccccchHHHHHhcccc
Confidence 45789999999999999988775
No 241
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=79.27 E-value=2.4 Score=34.98 Aligned_cols=23 Identities=30% Similarity=0.433 Sum_probs=19.9
Q ss_pred CCCeEEEEechhHHHHHHHHhcC
Q 021980 94 KEPAVLVGNSLGGFAALVAAVGL 116 (304)
Q Consensus 94 ~~~~~lvGhS~Gg~va~~~a~~~ 116 (304)
..++.|-|||+||.+|..+...+
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 275 DARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CceEEEeccccchHHHHHhcccc
Confidence 45789999999999999988775
No 242
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=78.13 E-value=18 Score=32.89 Aligned_cols=81 Identities=21% Similarity=0.279 Sum_probs=52.9
Q ss_pred chHHHhccCcEEEecCCCCCCCCc---chhhhch---hhHH-------HHH-HHHHHHh---cCCCeEEEEechhHHHHH
Q 021980 48 NIPELAKRYKVYAVDLLGFGWSEK---AIIEYDA---MVWK-------DQI-VDFLKEI---VKEPAVLVGNSLGGFAAL 110 (304)
Q Consensus 48 ~~~~l~~~~~vi~~D~~G~G~S~~---~~~~~~~---~~~~-------~~l-~~~~~~~---~~~~~~lvGhS~Gg~va~ 110 (304)
+...+.++|.++.-| -||..+.. .....+. .+|+ ..+ .++++.. ..+.-+..|.|-||.-++
T Consensus 52 ~~~~~~~G~A~~~TD-~Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 52 MATALARGYATASTD-SGHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred cchhhhcCeEEEEec-CCCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 456778899999999 57766532 1011111 1111 111 1222232 234568999999999999
Q ss_pred HHHhcCCcceeEEEEecCC
Q 021980 111 VAAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 111 ~~a~~~p~~v~~lvli~~~ 129 (304)
..|.+||+...+++.-.|+
T Consensus 131 ~~AQryP~dfDGIlAgaPA 149 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPA 149 (474)
T ss_pred HHHHhChhhcCeEEeCCch
Confidence 9999999999999987764
No 243
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=77.41 E-value=4 Score=34.60 Aligned_cols=33 Identities=21% Similarity=0.257 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCCCeEEEEechhHHHHHHHHhcC
Q 021980 84 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGL 116 (304)
Q Consensus 84 ~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~ 116 (304)
-+.+.+++.++..-.++|-|+|+.+|..||..+
T Consensus 32 GvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 455666777887778999999999999999864
No 244
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=77.26 E-value=3.6 Score=34.89 Aligned_cols=34 Identities=26% Similarity=0.353 Sum_probs=28.6
Q ss_pred HHHHHHHHhcCCCeEEEEechhHHHHHHHHhcCC
Q 021980 84 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLP 117 (304)
Q Consensus 84 ~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p 117 (304)
-+.+.+++.++..-.|.|-|+|+.+|..+|..+.
T Consensus 28 GVl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 28 GVLKALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 4566677888888899999999999999998653
No 245
>PRK10279 hypothetical protein; Provisional
Probab=76.45 E-value=3.9 Score=34.53 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=28.1
Q ss_pred HHHHHHHHhcCCCeEEEEechhHHHHHHHHhcCCc
Q 021980 84 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPD 118 (304)
Q Consensus 84 ~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~ 118 (304)
-+.+.+++.++..-.++|-|+|+.+|..||....+
T Consensus 22 GVL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~~ 56 (300)
T PRK10279 22 GVINALKKVGIEIDIVAGCSIGSLVGAAYACDRLS 56 (300)
T ss_pred HHHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCChH
Confidence 34566677788878999999999999999976543
No 246
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=74.75 E-value=6.1 Score=30.21 Aligned_cols=33 Identities=24% Similarity=0.290 Sum_probs=26.2
Q ss_pred HHHHHHHHhcCCCeEEEEechhHHHHHHHHhcC
Q 021980 84 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGL 116 (304)
Q Consensus 84 ~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~ 116 (304)
-+.+.+.+.++..-.++|-|.|+.+|..++...
T Consensus 15 Gvl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 15 GVAKALRERGPLIDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 445556666777779999999999999999764
No 247
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=74.29 E-value=5.5 Score=33.06 Aligned_cols=33 Identities=24% Similarity=0.229 Sum_probs=26.6
Q ss_pred HHHHHHHHhcCCCeEEEEechhHHHHHHHHhcC
Q 021980 84 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGL 116 (304)
Q Consensus 84 ~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~ 116 (304)
-+.+.+++.++..=.+.|-|+|+.++..||..+
T Consensus 27 GVL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 27 GILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 445566777777668999999999999999764
No 248
>PRK12467 peptide synthase; Provisional
Probab=74.15 E-value=12 Score=43.42 Aligned_cols=96 Identities=18% Similarity=0.062 Sum_probs=60.7
Q ss_pred CcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhc-CCCeEEEEechhHHH
Q 021980 30 SPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIV-KEPAVLVGNSLGGFA 108 (304)
Q Consensus 30 ~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~lvGhS~Gg~v 108 (304)
+.+++.|...+....+..+...+..+..++.+..++.-.-... ..+....+....+++.... ..++.+.|+|+||.+
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~~~~~~~l~~~~~~~d~~~--~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~~~ 3770 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEGDRHVLGLTCRHLLDDGWQ--DTSLQAMAVQYADYILWQQAKGPYGLLGWSLGGTL 3770 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCCCCcEEEEeccccccccCC--ccchHHHHHHHHHHHHHhccCCCeeeeeeecchHH
Confidence 4488899887777777777777777778888876654211111 1122223344444444433 357999999999999
Q ss_pred HHHHHhc---CCcceeEEEEec
Q 021980 109 ALVAAVG---LPDQVTGVALLN 127 (304)
Q Consensus 109 a~~~a~~---~p~~v~~lvli~ 127 (304)
+..++.. .-+.+.-+.+++
T Consensus 3771 a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3771 ARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred HHHHHHHHHHcCCceeEEEEEe
Confidence 9988864 344555555553
No 249
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=73.73 E-value=6 Score=30.83 Aligned_cols=33 Identities=24% Similarity=0.267 Sum_probs=25.2
Q ss_pred HHHHHHHHhcCCCeEEEEechhHHHHHHHHhcC
Q 021980 84 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGL 116 (304)
Q Consensus 84 ~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~ 116 (304)
-+.+.+++.++..=.++|-|.||.+|..++..+
T Consensus 16 Gvl~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 16 GALKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 344455556666678999999999999999754
No 250
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=73.49 E-value=4.3 Score=36.39 Aligned_cols=28 Identities=25% Similarity=0.395 Sum_probs=24.1
Q ss_pred EEEeCCCCCCCccChHHHHHHHHHHHhc
Q 021980 267 LVNFQAGHCPHDEVPELVNKALMDWLST 294 (304)
Q Consensus 267 ~~~~~~GH~~~~e~p~~~~~~i~~fl~~ 294 (304)
+.++++|||+..++|+...+.+..|+.-
T Consensus 463 ~r~y~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 463 LRIYEAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred EEEecCcceeecCChHHHHHHHHHHHhh
Confidence 4455899999999999999999999854
No 251
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=73.30 E-value=9.1 Score=34.49 Aligned_cols=39 Identities=23% Similarity=0.245 Sum_probs=28.8
Q ss_pred hcCCCeEEEEechhHHHHHHHHhc-----CCcceeEEEEecCCC
Q 021980 92 IVKEPAVLVGNSLGGFAALVAAVG-----LPDQVTGVALLNSAG 130 (304)
Q Consensus 92 ~~~~~~~lvGhS~Gg~va~~~a~~-----~p~~v~~lvli~~~~ 130 (304)
.+..|+.|||+|+|+.+.+..... .-+.|..+++++++.
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv 487 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPV 487 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCc
Confidence 356799999999999998865542 234678888887643
No 252
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=73.05 E-value=62 Score=28.05 Aligned_cols=62 Identities=18% Similarity=0.269 Sum_probs=45.1
Q ss_pred CCceEEEecCCCCCCCcHHHHHHHHhC--CCceEE--Ee-CCCCCCCc-cChHHHHHHHHHHHhccCC
Q 021980 236 SCPLLLLWGDLDPWVGSAKATRIKEFY--PNTTLV--NF-QAGHCPHD-EVPELVNKALMDWLSTVKP 297 (304)
Q Consensus 236 ~~P~lii~G~~D~~~~~~~~~~~~~~~--~~~~~~--~~-~~GH~~~~-e~p~~~~~~i~~fl~~~~~ 297 (304)
..+.+.+.++.|.++|....+++.+.. .+..+. -+ ++-|..|. ..|..+.....+|+.....
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVIS 292 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhccc
Confidence 568888889999999998888774332 333333 33 56787665 5899999999999976443
No 253
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=71.89 E-value=7.4 Score=31.23 Aligned_cols=33 Identities=27% Similarity=0.402 Sum_probs=25.4
Q ss_pred HHHHHHHHhcCCCeEEEEechhHHHHHHHHhcC
Q 021980 84 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGL 116 (304)
Q Consensus 84 ~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~ 116 (304)
-+.+.+++.+++.-.++|-|.|+.+|..+|...
T Consensus 17 GvL~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 17 GFLAALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 344455556677678999999999999999754
No 254
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=70.85 E-value=5.6 Score=33.42 Aligned_cols=29 Identities=31% Similarity=0.377 Sum_probs=22.7
Q ss_pred HHHHHHhcCCCeEEEEechhHHHHHHHHh
Q 021980 86 VDFLKEIVKEPAVLVGNSLGGFAALVAAV 114 (304)
Q Consensus 86 ~~~~~~~~~~~~~lvGhS~Gg~va~~~a~ 114 (304)
.+.+...++++-.++|||+|-..|+..+.
T Consensus 73 ~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 73 ARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 34456678889999999999988877664
No 255
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=70.67 E-value=3.1 Score=35.48 Aligned_cols=29 Identities=41% Similarity=0.686 Sum_probs=22.1
Q ss_pred HHHHHHHhcCCCeEEEEechhHHHHHHHH
Q 021980 85 IVDFLKEIVKEPAVLVGNSLGGFAALVAA 113 (304)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~Gg~va~~~a 113 (304)
+.+++...++++-.++|||+|=..|+..+
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHC
Confidence 34556677888999999999977766554
No 256
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=69.13 E-value=6.6 Score=33.01 Aligned_cols=29 Identities=31% Similarity=0.439 Sum_probs=22.6
Q ss_pred HHHHHHhcCCCeEEEEechhHHHHHHHHh
Q 021980 86 VDFLKEIVKEPAVLVGNSLGGFAALVAAV 114 (304)
Q Consensus 86 ~~~~~~~~~~~~~lvGhS~Gg~va~~~a~ 114 (304)
.+.+...++++..++|||+|=..|+..+.
T Consensus 67 ~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 67 WRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 34456667889999999999988777664
No 257
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=66.26 E-value=9.9 Score=29.14 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=24.6
Q ss_pred HHHHHHHhcCCCeEEEEechhHHHHHHHHhcCC
Q 021980 85 IVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLP 117 (304)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p 117 (304)
+.+.+++.++..-.++|-|.|+.+|..++...+
T Consensus 18 vl~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 18 VLRALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 344455556665689999999999999997643
No 258
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=66.01 E-value=7.8 Score=32.39 Aligned_cols=29 Identities=45% Similarity=0.478 Sum_probs=22.1
Q ss_pred HHHHHhc-CCCeEEEEechhHHHHHHHHhc
Q 021980 87 DFLKEIV-KEPAVLVGNSLGGFAALVAAVG 115 (304)
Q Consensus 87 ~~~~~~~-~~~~~lvGhS~Gg~va~~~a~~ 115 (304)
+.+...+ +.+-.++|||+|=..|+..+..
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 3345556 8899999999999888777654
No 259
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=65.89 E-value=14 Score=29.42 Aligned_cols=34 Identities=29% Similarity=0.475 Sum_probs=26.4
Q ss_pred HHHHHHHHhcCCCeEEEEechhHHHHHHHHhcCC
Q 021980 84 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLP 117 (304)
Q Consensus 84 ~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p 117 (304)
-+.+.+.+.+...-.++|.|.|+.+|..+|...+
T Consensus 15 Gvl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 15 GVLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 3445556666665689999999999999998765
No 260
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=63.65 E-value=30 Score=29.61 Aligned_cols=123 Identities=19% Similarity=0.156 Sum_probs=64.0
Q ss_pred CCCCCCccEEEEcCeeEEEEecCC-------CCcEEEEcccCCChh--hHHhchHHHhccCcEEEecCCCCCCCC----c
Q 021980 5 PFKPEGYNFWTWRGHKIHYVVQGE-------GSPVVLIHGFGASAF--HWRYNIPELAKRYKVYAVDLLGFGWSE----K 71 (304)
Q Consensus 5 ~~~~~~~~~~~~~g~~~~y~~~g~-------g~~iv~lHG~~~~~~--~~~~~~~~l~~~~~vi~~D~~G~G~S~----~ 71 (304)
|...-..||-...+-..||...|+ +++=+|+||.|..+. .--..+..-....+|+..|.-+.=--+ .
T Consensus 180 pna~~l~Qf~np~Np~~hy~ttg~EI~~q~~g~vDi~V~gaGTGGTitgvGRylke~~~~~kVv~vdp~~S~~~~~~~~g 259 (362)
T KOG1252|consen 180 PNAYILDQFHNPGNPLAHYETTGPEIWRQLDGKVDIFVAGAGTGGTITGVGRYLKEQNPNIKVVGVDPQESIVLSGGKPG 259 (362)
T ss_pred CChHHHHHhcCCCCcccccccccHHHHHHhcCCCCEEEeccCCCceeechhHHHHHhCCCCEEEEeCCCcceeccCCCCC
Confidence 333333467777777799998774 677778887554332 111122222345777777643321000 0
Q ss_pred c-------------hhhhc---hhhHH----HHHHHHHHHhcCCCeEEEEechhHHHHHH-HHhcCCcceeEEEEec
Q 021980 72 A-------------IIEYD---AMVWK----DQIVDFLKEIVKEPAVLVGNSLGGFAALV-AAVGLPDQVTGVALLN 127 (304)
Q Consensus 72 ~-------------~~~~~---~~~~~----~~l~~~~~~~~~~~~~lvGhS~Gg~va~~-~a~~~p~~v~~lvli~ 127 (304)
+ +...+ ...++ ++.......+..+.-+++|-|-|+.++.. ..++.|+...+++++-
T Consensus 260 ~~~~~I~GIGyg~~p~~ld~~~vd~~~~~~~d~A~~~Ar~La~eeGll~G~SSGan~~aAl~~a~~~en~~kliV~~ 336 (362)
T KOG1252|consen 260 PTFHKIQGIGYGFIPTTLDTKLVDEVLKVSSDEAIEMARRLALEEGLLVGISSGANVAAALKLAKRPENAGKLIVVT 336 (362)
T ss_pred CCccceeccccCcCccccchHHHHHHHHhCCHHHHHHHHHHHHhhCeeecccchHHHHHHHHHHhccccCCcEEEEE
Confidence 0 00011 11111 22223334455677899999999865433 3345566666666654
No 261
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=62.77 E-value=1.2e+02 Score=27.48 Aligned_cols=116 Identities=16% Similarity=0.118 Sum_probs=72.4
Q ss_pred CCccEEEEcCeeEEEEecC---CCCcEEEEcccCCC------hhhHHhchHHHh--ccCcEEEecCCCCCCCCcchhhhc
Q 021980 9 EGYNFWTWRGHKIHYVVQG---EGSPVVLIHGFGAS------AFHWRYNIPELA--KRYKVYAVDLLGFGWSEKAIIEYD 77 (304)
Q Consensus 9 ~~~~~~~~~g~~~~y~~~g---~g~~iv~lHG~~~~------~~~~~~~~~~l~--~~~~vi~~D~~G~G~S~~~~~~~~ 77 (304)
++.+++++.|-+++|...- .+-|||-+.---.. ...|+..+..+. ...+-+++=++|-+.- .-..
T Consensus 314 AG~~Tt~iSGSTI~~~~~~LPlkNiPVl~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~Alal~g~~~~----~f~~ 389 (473)
T PF06277_consen 314 AGSHTTEISGSTITYTEDILPLKNIPVLKPSLEEEEESFEELAEAIREALEWFDLEGEDQPVALALPGKPNP----SFAE 389 (473)
T ss_pred ccceEEEEeeeeEEecCCcCccCCCcEEeeccchhhcchHHHHHHHHHHHHhhcccCCCCcEEEEeCCCCCC----CHHH
Confidence 4568899999999998432 25577766532211 123444333332 2356666667765422 1224
Q ss_pred hhhHHHHHHHHHHHhcC--CC-eEEEEechhHHHHHHHHhcCCcceeEEEEecCC
Q 021980 78 AMVWKDQIVDFLKEIVK--EP-AVLVGNSLGGFAALVAAVGLPDQVTGVALLNSA 129 (304)
Q Consensus 78 ~~~~~~~l~~~~~~~~~--~~-~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~~~ 129 (304)
...+++.+.+.++.... .| ++++-.+||-.+++.+..+.+.. ..+|+++..
T Consensus 390 iq~lA~~i~~~~~~~~~~~~Plivv~e~D~aKvLGq~l~~~l~~~-~~licID~I 443 (473)
T PF06277_consen 390 IQELAEAIAEGMAELINPDQPLIVVVEQDMAKVLGQTLQALLPKK-RPLICIDQI 443 (473)
T ss_pred HHHHHHHHHHHHHhhccCCCCEEEEECchHHHHHHHHHHHhcCCC-CCEEEEeeE
Confidence 55677777777776543 24 56778899999999999876633 468888753
No 262
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=62.52 E-value=44 Score=28.00 Aligned_cols=44 Identities=23% Similarity=0.382 Sum_probs=22.8
Q ss_pred EEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEechhHHH
Q 021980 58 VYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFA 108 (304)
Q Consensus 58 vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~Gg~v 108 (304)
-|.+| ||.|.++....++.. ...+..+ . .....+++|+|==+++
T Consensus 181 ~IilD-PGiGF~k~~~~n~~l---l~~l~~l-~--~lg~Pilvg~SRKsfi 224 (282)
T PRK11613 181 KLLLD-PGFGFGKNLSHNYQL---LARLAEF-H--HFNLPLLVGMSRKSMI 224 (282)
T ss_pred hEEEe-CCCCcCCCHHHHHHH---HHHHHHH-H--hCCCCEEEEecccHHH
Confidence 67888 588876543222211 1222222 1 2355689999944333
No 263
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=62.08 E-value=16 Score=27.31 Aligned_cols=49 Identities=18% Similarity=0.225 Sum_probs=29.9
Q ss_pred chHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCC-eEEEEechhH
Q 021980 48 NIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEP-AVLVGNSLGG 106 (304)
Q Consensus 48 ~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~lvGhS~Gg 106 (304)
+.+++.++-.|++.|.+|=-.| .+.+|+.+.++ ...+ .. .++||-|.|=
T Consensus 60 il~~i~~~~~vi~Ld~~Gk~~s--------Se~fA~~l~~~-~~~G-~~i~f~IGG~~Gl 109 (155)
T COG1576 60 ILAAIPKGSYVVLLDIRGKALS--------SEEFADFLERL-RDDG-RDISFLIGGADGL 109 (155)
T ss_pred HHHhcCCCCeEEEEecCCCcCC--------hHHHHHHHHHH-HhcC-CeEEEEEeCcccC
Confidence 4556667788999999984333 33344444333 2234 44 5788988883
No 264
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=61.58 E-value=9 Score=34.14 Aligned_cols=38 Identities=18% Similarity=0.307 Sum_probs=28.5
Q ss_pred HHHHHHHHhcCCCeEEEEechhHHHHHHHHhcCCccee
Q 021980 84 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVT 121 (304)
Q Consensus 84 ~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 121 (304)
-+.+.+.+.++.+=++.|-|.|+.+|..++...++.+.
T Consensus 90 GVLkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel~ 127 (421)
T cd07230 90 GVLKALFEANLLPRIISGSSAGSIVAAILCTHTDEEIP 127 (421)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHH
Confidence 34455555566677899999999999999987666543
No 265
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=60.77 E-value=9.7 Score=33.43 Aligned_cols=40 Identities=18% Similarity=0.221 Sum_probs=30.0
Q ss_pred HHHHHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEEE
Q 021980 85 IVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGVA 124 (304)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 124 (304)
+.+.+.+.++.+=++.|-|.|+.+|..+|...++.+..+.
T Consensus 101 v~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 101 VVKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 3445566677777899999999999999997665554443
No 266
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=60.05 E-value=20 Score=30.58 Aligned_cols=19 Identities=37% Similarity=0.490 Sum_probs=16.8
Q ss_pred EEEEechhHHHHHHHHhcC
Q 021980 98 VLVGNSLGGFAALVAAVGL 116 (304)
Q Consensus 98 ~lvGhS~Gg~va~~~a~~~ 116 (304)
.+.|.|+||.+|..++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 6889999999999999754
No 267
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=57.43 E-value=27 Score=26.60 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=24.1
Q ss_pred HHHHHHHHhcCCCeEEEEechhHHHHHHHHhcC
Q 021980 84 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGL 116 (304)
Q Consensus 84 ~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~ 116 (304)
-+.+.+++.+...-.++|-|.|+.+|..++...
T Consensus 17 Gvl~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 17 GVLKALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 344445555555558999999999999998653
No 268
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=56.74 E-value=7.7 Score=32.90 Aligned_cols=34 Identities=26% Similarity=0.337 Sum_probs=25.7
Q ss_pred HHHHHHHHhcCCCeEEEEechhHHHHHHHHhcCC
Q 021980 84 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLP 117 (304)
Q Consensus 84 ~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p 117 (304)
-+.+.+.+.++.+-++.|-|.|+.+|..++...+
T Consensus 85 GVlkaL~e~gl~p~~i~GsSaGAivaa~~~~~t~ 118 (323)
T cd07231 85 GVVRTLVEHQLLPRVIAGSSVGSIVCAIIATRTD 118 (323)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCH
Confidence 3445555667777789999999999999987543
No 269
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=56.40 E-value=48 Score=26.30 Aligned_cols=57 Identities=12% Similarity=0.208 Sum_probs=40.4
Q ss_pred CCceEEEecCCCCCCCcHHHHHHHHhCCCceEEEeCCCCCCCccChHHHHHHHHHHH
Q 021980 236 SCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLVNFQAGHCPHDEVPELVNKALMDWL 292 (304)
Q Consensus 236 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl 292 (304)
..|.+++.|..+...+.+..+.+.++..+.-++.++..++.-...-+.+.+.+..-+
T Consensus 53 ~yP~ly~~g~~~~~~s~~e~~~Lr~Yl~~GGfl~~D~~~~~~~~~~~~~r~~~~~v~ 109 (207)
T PF13709_consen 53 FYPFLYWPGHGDFPLSDEEIANLRRYLENGGFLLFDDRDCGSAGFDASFRRLMKRVF 109 (207)
T ss_pred hCCEEEEeCCCCCCCCHHHHHHHHHHHHcCCEEEEECCCcccccccHHHHHHHHHhc
Confidence 679999999999988888899999999888888886554322222333444444444
No 270
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=55.32 E-value=31 Score=27.26 Aligned_cols=63 Identities=21% Similarity=0.169 Sum_probs=41.5
Q ss_pred CcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEech----hHHHHHHHHhcCC-cceeEEEEe
Q 021980 56 YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSL----GGFAALVAAVGLP-DQVTGVALL 126 (304)
Q Consensus 56 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~----Gg~va~~~a~~~p-~~v~~lvli 126 (304)
-+|+..|.++.. .++.+.+++.+.+++++.+ -.++|+|+|. |..++-.+|.+.- ..+..++-+
T Consensus 78 d~V~~~~~~~~~-------~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 78 DRAILVSDRAFA-------GADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred CEEEEEeccccc-------CCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 356766655432 3455667788888877766 4689999998 7788888887632 234444433
No 271
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=54.80 E-value=16 Score=33.70 Aligned_cols=30 Identities=20% Similarity=0.229 Sum_probs=23.9
Q ss_pred HHH-HHhcCCCeEEEEechhHHHHHHHHhcC
Q 021980 87 DFL-KEIVKEPAVLVGNSLGGFAALVAAVGL 116 (304)
Q Consensus 87 ~~~-~~~~~~~~~lvGhS~Gg~va~~~a~~~ 116 (304)
+.+ +..+++|-.++|||+|=..|+..|.-.
T Consensus 256 ~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 256 QLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 444 467889999999999998888877654
No 272
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=54.76 E-value=13 Score=32.95 Aligned_cols=40 Identities=20% Similarity=0.273 Sum_probs=29.6
Q ss_pred HHHHHHHHhcCCCeEEEEechhHHHHHHHHhcCCcceeEE
Q 021980 84 QIVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPDQVTGV 123 (304)
Q Consensus 84 ~l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 123 (304)
-+.+.+.+.++.+=+++|-|.|+.+|..++...++.+..+
T Consensus 84 GVlkaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 84 GVVKALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 3444555556667789999999999999998766655444
No 273
>COG0218 Predicted GTPase [General function prediction only]
Probab=54.05 E-value=25 Score=27.61 Aligned_cols=22 Identities=18% Similarity=0.323 Sum_probs=15.5
Q ss_pred ccCCCceEEEecCCCCCCCcHH
Q 021980 233 SKLSCPLLLLWGDLDPWVGSAK 254 (304)
Q Consensus 233 ~~i~~P~lii~G~~D~~~~~~~ 254 (304)
....+|++++.-+-|.+-..+.
T Consensus 132 ~~~~i~~~vv~tK~DKi~~~~~ 153 (200)
T COG0218 132 LELGIPVIVVLTKADKLKKSER 153 (200)
T ss_pred HHcCCCeEEEEEccccCChhHH
Confidence 4456788888888888765433
No 274
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=53.52 E-value=10 Score=27.32 Aligned_cols=25 Identities=28% Similarity=0.541 Sum_probs=16.7
Q ss_pred CCCcEEE-EcccCCChhhH--HhchHHH
Q 021980 28 EGSPVVL-IHGFGASAFHW--RYNIPEL 52 (304)
Q Consensus 28 ~g~~iv~-lHG~~~~~~~~--~~~~~~l 52 (304)
+.+|+|| +||+++.+-.| +.+++.|
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~liA~~l 77 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSRLIAEHL 77 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHHHHHHHH
Confidence 4556665 89999998776 3344443
No 275
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=53.07 E-value=32 Score=28.37 Aligned_cols=35 Identities=23% Similarity=0.289 Sum_probs=25.7
Q ss_pred HHHHHHHHhcCCCe-EEEEechhHHHHHHHHhcCCc
Q 021980 84 QIVDFLKEIVKEPA-VLVGNSLGGFAALVAAVGLPD 118 (304)
Q Consensus 84 ~l~~~~~~~~~~~~-~lvGhS~Gg~va~~~a~~~p~ 118 (304)
-+.+.+.+.++.++ .++|-|.||.+|..++...++
T Consensus 15 Gvl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 15 GVLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 34445555556534 899999999999999987654
No 276
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=52.30 E-value=17 Score=27.36 Aligned_cols=49 Identities=12% Similarity=0.245 Sum_probs=28.3
Q ss_pred chHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcC-CCeEEEEechh
Q 021980 48 NIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVK-EPAVLVGNSLG 105 (304)
Q Consensus 48 ~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~lvGhS~G 105 (304)
+...+.++-.+|+.|-.|- .++...+++.+.+.... +. +=+++||-|.|
T Consensus 60 il~~i~~~~~~i~Ld~~Gk--------~~sS~~fA~~l~~~~~~-g~~~i~F~IGG~~G 109 (155)
T PF02590_consen 60 ILKKIPPNDYVILLDERGK--------QLSSEEFAKKLERWMNQ-GKSDIVFIIGGADG 109 (155)
T ss_dssp HHCTSHTTSEEEEE-TTSE--------E--HHHHHHHHHHHHHT-TS-EEEEEE-BTTB
T ss_pred HHhhccCCCEEEEEcCCCc--------cCChHHHHHHHHHHHhc-CCceEEEEEecCCC
Confidence 3444456678999998873 34445556666555433 33 23689999998
No 277
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=51.88 E-value=28 Score=28.20 Aligned_cols=34 Identities=32% Similarity=0.391 Sum_probs=25.2
Q ss_pred HHHHHHHHhcCC--CeEEEEechhHHHHHHHHhcCC
Q 021980 84 QIVDFLKEIVKE--PAVLVGNSLGGFAALVAAVGLP 117 (304)
Q Consensus 84 ~l~~~~~~~~~~--~~~lvGhS~Gg~va~~~a~~~p 117 (304)
-+.+.+.+.++. .-.++|-|.|+.+|..|+...+
T Consensus 16 GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 16 GVLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 445555555655 3479999999999999998654
No 278
>COG3933 Transcriptional antiterminator [Transcription]
Probab=51.74 E-value=74 Score=28.44 Aligned_cols=73 Identities=14% Similarity=0.203 Sum_probs=48.5
Q ss_pred CCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEechhHHH
Q 021980 29 GSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFA 108 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~Gg~v 108 (304)
-..||..||....+ +...++..|-..--+.++|+|= +.+.....+.+.+.+++.+..+=.++=-+||+..
T Consensus 109 v~vIiiAHG~sTAS-SmaevanrLL~~~~~~aiDMPL---------dvsp~~vle~l~e~~k~~~~~~GlllLVDMGSL~ 178 (470)
T COG3933 109 VKVIIIAHGYSTAS-SMAEVANRLLGEEIFIAIDMPL---------DVSPSDVLEKLKEYLKERDYRSGLLLLVDMGSLT 178 (470)
T ss_pred eeEEEEecCcchHH-HHHHHHHHHhhccceeeecCCC---------cCCHHHHHHHHHHHHHhcCccCceEEEEecchHH
Confidence 35688899986644 3456666665556789999981 2233345577788888877766445555999865
Q ss_pred HHH
Q 021980 109 ALV 111 (304)
Q Consensus 109 a~~ 111 (304)
.+.
T Consensus 179 ~f~ 181 (470)
T COG3933 179 SFG 181 (470)
T ss_pred HHH
Confidence 544
No 279
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=48.40 E-value=33 Score=28.01 Aligned_cols=34 Identities=24% Similarity=0.357 Sum_probs=24.3
Q ss_pred HHHHHHHHhcCC--C--eEEEEechhHHHHHHHHhcCC
Q 021980 84 QIVDFLKEIVKE--P--AVLVGNSLGGFAALVAAVGLP 117 (304)
Q Consensus 84 ~l~~~~~~~~~~--~--~~lvGhS~Gg~va~~~a~~~p 117 (304)
-+.+.+.+.++. + -.++|-|.|+.+|..++...+
T Consensus 16 GVl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 16 GVASALREHAPRLLQNARRIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred HHHHHHHHcCcccccCCCEEEEEcHHHHHHHHHHhCCC
Confidence 344455555543 2 389999999999999998754
No 280
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=48.19 E-value=35 Score=25.76 Aligned_cols=48 Identities=19% Similarity=0.322 Sum_probs=27.6
Q ss_pred hHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcC-CCeEEEEechh
Q 021980 49 IPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVK-EPAVLVGNSLG 105 (304)
Q Consensus 49 ~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~lvGhS~G 105 (304)
.+.+.++-.+|+.|-+|-- .+...+++.+.+.... +. +-+++||-+.|
T Consensus 61 l~~l~~~~~~i~LDe~Gk~--------~sS~~fA~~l~~~~~~-g~~~i~F~IGGa~G 109 (157)
T PRK00103 61 LAALPKGARVIALDERGKQ--------LSSEEFAQELERWRDD-GRSDVAFVIGGADG 109 (157)
T ss_pred HhhCCCCCEEEEEcCCCCc--------CCHHHHHHHHHHHHhc-CCccEEEEEcCccc
Confidence 3344445568999988742 3344455555544222 22 33578888877
No 281
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=46.94 E-value=55 Score=30.37 Aligned_cols=34 Identities=15% Similarity=0.391 Sum_probs=26.0
Q ss_pred CCCeEEEEe------chhHHHHHHHHhcCCcceeEEEEecC
Q 021980 94 KEPAVLVGN------SLGGFAALVAAVGLPDQVTGVALLNS 128 (304)
Q Consensus 94 ~~~~~lvGh------S~Gg~va~~~a~~~p~~v~~lvli~~ 128 (304)
.++|+++|| +.|+.+|+..-+.--++ .+.++++|
T Consensus 337 ~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp 376 (655)
T COG3887 337 SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDP 376 (655)
T ss_pred cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECc
Confidence 679999999 68999998876654444 56677775
No 282
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=46.78 E-value=13 Score=32.09 Aligned_cols=55 Identities=24% Similarity=0.227 Sum_probs=41.6
Q ss_pred hhhccCCCceEEEecCCCCCCCcH-HHHHHHHhCCCc--eEEEe-CCCCCCCccChHHH
Q 021980 230 SVLSKLSCPLLLLWGDLDPWVGSA-KATRIKEFYPNT--TLVNF-QAGHCPHDEVPELV 284 (304)
Q Consensus 230 ~~l~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~--~~~~~-~~GH~~~~e~p~~~ 284 (304)
..+.+++.|++++.|..|...|.. ........+++. .+..+ ++.|+-..|-.++.
T Consensus 245 tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 245 TGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred ccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 345788999999999999987765 345567778877 33444 68999988877774
No 283
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=46.55 E-value=37 Score=26.42 Aligned_cols=14 Identities=29% Similarity=0.479 Sum_probs=11.4
Q ss_pred cEEEecCCCCCCCCc
Q 021980 57 KVYAVDLLGFGWSEK 71 (304)
Q Consensus 57 ~vi~~D~~G~G~S~~ 71 (304)
++|++| ||||.+++
T Consensus 1 k~I~iD-pGHGg~d~ 14 (189)
T TIGR02883 1 KIIVID-PGHGGIDG 14 (189)
T ss_pred CEEEEe-CCCCCCCC
Confidence 378888 99998875
No 284
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=45.84 E-value=30 Score=29.24 Aligned_cols=34 Identities=26% Similarity=0.292 Sum_probs=24.8
Q ss_pred HHHHHHHhcCCCeEEEEechhHHHHHHHHhcCCc
Q 021980 85 IVDFLKEIVKEPAVLVGNSLGGFAALVAAVGLPD 118 (304)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~ 118 (304)
+.+.+.+.++.+-++.|-|.|+.+|..++....+
T Consensus 87 vl~aL~e~~l~~~~i~GtSaGAi~aa~~~~~~~~ 120 (298)
T cd07206 87 VVKALWEQDLLPRVISGSSAGAIVAALLGTHTDE 120 (298)
T ss_pred HHHHHHHcCCCCCEEEEEcHHHHHHHHHHcCCcH
Confidence 3344444556666899999999999999976443
No 285
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=44.56 E-value=45 Score=28.03 Aligned_cols=16 Identities=25% Similarity=0.355 Sum_probs=13.1
Q ss_pred CcEEEecCCCCCCCCcc
Q 021980 56 YKVYAVDLLGFGWSEKA 72 (304)
Q Consensus 56 ~~vi~~D~~G~G~S~~~ 72 (304)
-.+|++| ||||..|+.
T Consensus 56 ~~~IvID-pGHGG~DpG 71 (287)
T PRK10319 56 KRVVMLD-PGHGGIDTG 71 (287)
T ss_pred CeEEEEE-CCCCCCCCC
Confidence 4689999 999988753
No 286
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=44.15 E-value=31 Score=30.50 Aligned_cols=61 Identities=15% Similarity=0.311 Sum_probs=37.8
Q ss_pred hhccCCCceEEEecCCCCCCCcHHHHHHHHhCCCceEEEe-CCCCCCC-----ccChHHHHHHHHHHHh
Q 021980 231 VLSKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLVNF-QAGHCPH-----DEVPELVNKALMDWLS 293 (304)
Q Consensus 231 ~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~-~~GH~~~-----~e~p~~~~~~i~~fl~ 293 (304)
.++.=.--+|+|+|++|++.-. .-.+.+...++.+.+. ++.|... .++.++....|++|-.
T Consensus 346 Wvr~~~~rmlFVYG~nDPW~A~--~f~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 346 WVRNNGPRMLFVYGENDPWSAE--PFRLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred HHHhCCCeEEEEeCCCCCcccC--ccccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 3444456799999999998632 2223333445666666 4668654 3455566777888874
No 287
>COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism]
Probab=43.42 E-value=2.2e+02 Score=24.63 Aligned_cols=114 Identities=20% Similarity=0.298 Sum_probs=68.4
Q ss_pred CCccEEEEcCeeEEEEecC---CCCcEE-EEcc--cCCChhhHHhchHHH--hccCcEEEecCCCCCCCCcchhhhchhh
Q 021980 9 EGYNFWTWRGHKIHYVVQG---EGSPVV-LIHG--FGASAFHWRYNIPEL--AKRYKVYAVDLLGFGWSEKAIIEYDAMV 80 (304)
Q Consensus 9 ~~~~~~~~~g~~~~y~~~g---~g~~iv-~lHG--~~~~~~~~~~~~~~l--~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 80 (304)
++.++.++.|-+|.|.+.- .+-|+. |+.- --.-...|+.-...| .++..-++.-++|- .+........
T Consensus 317 AG~hT~eiSGSTItytdvilPlkNiPv~km~kqde~~~~~e~~~qkL~wf~~de~~~~~alal~ge----n~~~y~~v~~ 392 (473)
T COG4819 317 AGAHTLEISGSTITYTDVILPLKNIPVAKMIKQDETFDLVEAWQQKLIWFDLDEKTDAYALALPGE----NPVRYAAVLT 392 (473)
T ss_pred cccceEEeeccEEEEeeeEeeccCCchhhcCccchhhHHHHHHHHHHhhhccCcCcceEEEEcccC----CChhHHHHHH
Confidence 4557778888888887652 223333 2221 111123454433333 34566777777763 2322223455
Q ss_pred HHHHHHHHHHHhcC-CC-eEEEEechhHHHHHHHHhcCCcceeEEEEec
Q 021980 81 WKDQIVDFLKEIVK-EP-AVLVGNSLGGFAALVAAVGLPDQVTGVALLN 127 (304)
Q Consensus 81 ~~~~l~~~~~~~~~-~~-~~lvGhS~Gg~va~~~a~~~p~~v~~lvli~ 127 (304)
+++.+.+++...-. .| +++.+|+||-.+++.+-.+.|..+- +++++
T Consensus 393 va~ai~~~~k~~s~~hplivv~~~D~gKaLGq~l~~~l~~~~p-liciD 440 (473)
T COG4819 393 VANAIVDFVKRFSNPHPLIVVAEQDFGKALGQLLRPQLPGQLP-LICID 440 (473)
T ss_pred HHHHHHHHHHhcCCCCcEEEEEhhHHHHHHHHHhcccCCCCcc-EEEEe
Confidence 77888888887533 45 4677899999999999988885543 44444
No 288
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=42.79 E-value=47 Score=27.15 Aligned_cols=33 Identities=27% Similarity=0.309 Sum_probs=22.8
Q ss_pred HHHHHHHhcC--CCeEEEEechhHHHHHHHHhcCC
Q 021980 85 IVDFLKEIVK--EPAVLVGNSLGGFAALVAAVGLP 117 (304)
Q Consensus 85 l~~~~~~~~~--~~~~lvGhS~Gg~va~~~a~~~p 117 (304)
+.+.+.+.+. ..-.+.|-|.|+.+|..++...+
T Consensus 18 Vl~aL~e~g~~~~~d~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 18 VAVCLKKYAPHLLLNKISGASAGALAACCLLCDLP 52 (245)
T ss_pred HHHHHHHhCcccCCCeEEEEcHHHHHHHHHHhCCc
Confidence 3444545442 22349999999999999998654
No 289
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=41.78 E-value=51 Score=27.10 Aligned_cols=21 Identities=29% Similarity=0.551 Sum_probs=18.3
Q ss_pred eEEEEechhHHHHHHHHhcCC
Q 021980 97 AVLVGNSLGGFAALVAAVGLP 117 (304)
Q Consensus 97 ~~lvGhS~Gg~va~~~a~~~p 117 (304)
-.++|-|.|+.+|..|+...+
T Consensus 34 ~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCCC
Confidence 479999999999999998655
No 290
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=40.26 E-value=51 Score=27.06 Aligned_cols=21 Identities=24% Similarity=0.347 Sum_probs=18.2
Q ss_pred eEEEEechhHHHHHHHHhcCC
Q 021980 97 AVLVGNSLGGFAALVAAVGLP 117 (304)
Q Consensus 97 ~~lvGhS~Gg~va~~~a~~~p 117 (304)
-.++|-|.|+.+|..|+...+
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 38 RKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCCC
Confidence 468999999999999998654
No 291
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=38.86 E-value=20 Score=27.07 Aligned_cols=47 Identities=23% Similarity=0.296 Sum_probs=24.6
Q ss_pred ecCCCCCCCCc---chhhhchhhHHHHH----HHHHHHhc----CCCeEEEEechhHH
Q 021980 61 VDLLGFGWSEK---AIIEYDAMVWKDQI----VDFLKEIV----KEPAVLVGNSLGGF 107 (304)
Q Consensus 61 ~D~~G~G~S~~---~~~~~~~~~~~~~l----~~~~~~~~----~~~~~lvGhS~Gg~ 107 (304)
+-+-|||+... ....++...+++.+ ..+-+... +++++|+|-||+..
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 44568987721 22345666667666 33333332 35788999888864
No 292
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=36.93 E-value=1.3e+02 Score=25.13 Aligned_cols=55 Identities=18% Similarity=0.260 Sum_probs=38.4
Q ss_pred ccCCCceEEEecCCCCCCCcHHHHHHHHhCCCceEEEeC--CCC-CCCccChHHHHHHHHHHHh
Q 021980 233 SKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLVNFQ--AGH-CPHDEVPELVNKALMDWLS 293 (304)
Q Consensus 233 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~--~GH-~~~~e~p~~~~~~i~~fl~ 293 (304)
....+|+.++.|++ ...++..+.+|..+++.+. -|+ ...--.|++..+.|++=.+
T Consensus 144 g~~gVPV~lVsGDd------~~~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~aa~ 201 (270)
T cd08769 144 GEFGVPVVLVAGDS------ELEKEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELREAVK 201 (270)
T ss_pred hhcCCCEEEEecCH------HHHHHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHHHHHH
Confidence 56789999999975 3345667778999998884 353 3444567777766666554
No 293
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=36.71 E-value=18 Score=29.89 Aligned_cols=15 Identities=27% Similarity=0.470 Sum_probs=12.2
Q ss_pred cCCCeEEEEechhHH
Q 021980 93 VKEPAVLVGNSLGGF 107 (304)
Q Consensus 93 ~~~~~~lvGhS~Gg~ 107 (304)
..+.++++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 346899999999964
No 294
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=36.58 E-value=2.2e+02 Score=25.04 Aligned_cols=85 Identities=19% Similarity=0.240 Sum_probs=52.5
Q ss_pred CcEEEEcccCC-------ChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEe
Q 021980 30 SPVVLIHGFGA-------SAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGN 102 (304)
Q Consensus 30 ~~iv~lHG~~~-------~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGh 102 (304)
..||+|||... +...|..+++.+.++-.+-.+|..=.|.-+.-.. + +.-+..++. ..+-.++..
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~Glee--D----a~~lR~~a~---~~~~~lva~ 242 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEE--D----AYALRLFAE---VGPELLVAS 242 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHH--H----HHHHHHHHH---hCCcEEEEe
Confidence 36999997533 4467999999888777777888654443333110 1 112222222 223378888
Q ss_pred chhHHHHHHHHhcCCcceeEEEEecC
Q 021980 103 SLGGFAALVAAVGLPDQVTGVALLNS 128 (304)
Q Consensus 103 S~Gg~va~~~a~~~p~~v~~lvli~~ 128 (304)
|+.-..+ .|-|||-++.+++.
T Consensus 243 S~SKnfg-----LYgERVGa~~vva~ 263 (396)
T COG1448 243 SFSKNFG-----LYGERVGALSVVAE 263 (396)
T ss_pred hhhhhhh-----hhhhccceeEEEeC
Confidence 8775444 36788988888864
No 295
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=36.36 E-value=56 Score=26.73 Aligned_cols=30 Identities=23% Similarity=0.186 Sum_probs=21.5
Q ss_pred HHHHHHHhcCC---Ce-EEEEechhHHHHHHHHh
Q 021980 85 IVDFLKEIVKE---PA-VLVGNSLGGFAALVAAV 114 (304)
Q Consensus 85 l~~~~~~~~~~---~~-~lvGhS~Gg~va~~~a~ 114 (304)
+.+.+.+.++. ++ .++|-|.|+.+|..++.
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 17 AAKALLRHGKKLLKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHcCchhhccCCEEEEECHHHHHHHHHhc
Confidence 34444444443 34 79999999999999984
No 296
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=35.36 E-value=72 Score=27.21 Aligned_cols=45 Identities=18% Similarity=0.236 Sum_probs=32.1
Q ss_pred HHHHHHHHhcCCCeEEEEechh--HHHHHHHHhcCCcceeEEEEecC
Q 021980 84 QIVDFLKEIVKEPAVLVGNSLG--GFAALVAAVGLPDQVTGVALLNS 128 (304)
Q Consensus 84 ~l~~~~~~~~~~~~~lvGhS~G--g~va~~~a~~~p~~v~~lvli~~ 128 (304)
.+...+..+...+++|+|-|== =-+=..++.++|++|.++.+=+-
T Consensus 267 ~l~nil~~~p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRdv 313 (373)
T COG4850 267 SLRNILRRYPDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRDV 313 (373)
T ss_pred HHHHHHHhCCCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeeec
Confidence 4444667777889999997711 13445677899999999887553
No 297
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=34.57 E-value=22 Score=29.98 Aligned_cols=18 Identities=28% Similarity=0.667 Sum_probs=14.0
Q ss_pred CCCcEEE-EcccCCChhhH
Q 021980 28 EGSPVVL-IHGFGASAFHW 45 (304)
Q Consensus 28 ~g~~iv~-lHG~~~~~~~~ 45 (304)
+.+|+|+ +|||++++..|
T Consensus 107 p~KPLvLSfHG~tGTGKN~ 125 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNY 125 (344)
T ss_pred CCCCeEEEecCCCCCchhH
Confidence 4567776 89999988765
No 298
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=33.93 E-value=1.1e+02 Score=22.89 Aligned_cols=29 Identities=24% Similarity=0.172 Sum_probs=21.1
Q ss_pred HHHHHHHhcC--CCeEEEEechhHHHHHHHH
Q 021980 85 IVDFLKEIVK--EPAVLVGNSLGGFAALVAA 113 (304)
Q Consensus 85 l~~~~~~~~~--~~~~lvGhS~Gg~va~~~a 113 (304)
+.+.+.+.+. ..-.+.|.|.|+.++..++
T Consensus 16 vl~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 16 VLSALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 3344444444 4458899999999999999
No 299
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=32.78 E-value=89 Score=24.59 Aligned_cols=62 Identities=16% Similarity=0.214 Sum_probs=41.7
Q ss_pred ccC-CCceEEEecCCCCCCCcHH---HHHHHHhCCCc-eEEEe--CCCCCCCcc---ChHHHHHHHHHHHhc
Q 021980 233 SKL-SCPLLLLWGDLDPWVGSAK---ATRIKEFYPNT-TLVNF--QAGHCPHDE---VPELVNKALMDWLST 294 (304)
Q Consensus 233 ~~i-~~P~lii~G~~D~~~~~~~---~~~~~~~~~~~-~~~~~--~~GH~~~~e---~p~~~~~~i~~fl~~ 294 (304)
+.| +++.|-|-|+.|.++.... +..+...+|.. +...+ ++||+-..- --+++.-.|.+|+.+
T Consensus 130 ~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 130 AAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred HHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 345 4577779999999988653 44555556654 33333 589975543 456788888898864
No 300
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=31.97 E-value=60 Score=27.51 Aligned_cols=17 Identities=24% Similarity=0.417 Sum_probs=15.4
Q ss_pred EEEEechhHHHHHHHHh
Q 021980 98 VLVGNSLGGFAALVAAV 114 (304)
Q Consensus 98 ~lvGhS~Gg~va~~~a~ 114 (304)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 58899999999999986
No 301
>cd06143 PAN2_exo DEDDh 3'-5' exonuclease domain of the eukaryotic exoribonuclease PAN2. PAN2 is the catalytic subunit of poly(A) nuclease (PAN), a Pab1p-dependent 3'-5' exoribonuclease which plays an important role in the posttranscriptional maturation of pre-mRNAs. PAN catalyzes the deadenylation of poly(A) tails, which are initially synthesized to default lengths of 70 to 90, to mRNA-specific lengths of 55 to 71. Pab1p and PAN also play a role in the export and decay of mRNA. PAN2 contains a DEDDh-type DnaQ-like 3'-5' exonuclease domain with three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis.
Probab=31.77 E-value=52 Score=25.31 Aligned_cols=23 Identities=22% Similarity=0.260 Sum_probs=15.0
Q ss_pred HHHHHHHHhcCCCeEEEEechhH
Q 021980 84 QIVDFLKEIVKEPAVLVGNSLGG 106 (304)
Q Consensus 84 ~l~~~~~~~~~~~~~lvGhS~Gg 106 (304)
++.+.+..+..+..+|||||+--
T Consensus 90 ~v~~~l~~li~~~tILVGHsL~n 112 (174)
T cd06143 90 SAYLKLRLLVDLGCIFVGHGLAK 112 (174)
T ss_pred HHHHHHHHHcCCCCEEEeccchh
Confidence 33444444444567999999875
No 302
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=31.31 E-value=60 Score=19.97 Aligned_cols=36 Identities=17% Similarity=0.192 Sum_probs=27.4
Q ss_pred HhCCCceEEEeCCCCCCCccChHHHHHHHHHHHhcc
Q 021980 260 EFYPNTTLVNFQAGHCPHDEVPELVNKALMDWLSTV 295 (304)
Q Consensus 260 ~~~~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~ 295 (304)
+..|+..+...++-+++-.|.++++.+.+.+|-.+.
T Consensus 23 e~~PDTvItL~~G~k~vV~Es~~eVi~ki~~y~~~i 58 (60)
T PF06289_consen 23 EETPDTVITLTNGKKYVVKESVEEVIEKIIEYRRKI 58 (60)
T ss_pred EEcCCeEEEEeCCCEEEEECCHHHHHHHHHHHHHhc
Confidence 346775554446777888999999999999998654
No 303
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=30.83 E-value=68 Score=27.33 Aligned_cols=22 Identities=41% Similarity=0.599 Sum_probs=17.4
Q ss_pred cCCCeEEEEechhHHHHHHHHh
Q 021980 93 VKEPAVLVGNSLGGFAALVAAV 114 (304)
Q Consensus 93 ~~~~~~lvGhS~Gg~va~~~a~ 114 (304)
+.++..+.|||+|=+-|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4677899999999877766664
No 304
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=29.68 E-value=1.3e+02 Score=23.53 Aligned_cols=60 Identities=22% Similarity=0.314 Sum_probs=33.4
Q ss_pred CCcEEEEcccCCChhhH---HhchHHHhc---cCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHh
Q 021980 29 GSPVVLIHGFGASAFHW---RYNIPELAK---RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI 92 (304)
Q Consensus 29 g~~iv~lHG~~~~~~~~---~~~~~~l~~---~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~ 92 (304)
.+|++++||.....-.. ..+...|.+ ...++.+.--|||....... ..+.+.+.+++++.
T Consensus 144 ~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~----~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 144 KPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENR----RDWYERILDFFDKY 209 (213)
T ss_dssp GSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHH----HHHHHHHHHHHHHH
T ss_pred CCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhH----HHHHHHHHHHHHHH
Confidence 57999999975543222 223344432 35667776777866653321 13446677777654
No 305
>COG0860 AmiC N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]
Probab=28.07 E-value=1.2e+02 Score=24.49 Aligned_cols=37 Identities=19% Similarity=0.190 Sum_probs=21.8
Q ss_pred CcEEEecCCCCCCCCcchhh---hc----hhhHHHHHHHHHHHhc
Q 021980 56 YKVYAVDLLGFGWSEKAIIE---YD----AMVWKDQIVDFLKEIV 93 (304)
Q Consensus 56 ~~vi~~D~~G~G~S~~~~~~---~~----~~~~~~~l~~~~~~~~ 93 (304)
-.+|++| ||||..|..... .. ....+..+.+.+.+.+
T Consensus 42 ~~~I~ID-pGHGG~D~GAig~~g~~EKdvtL~ia~~l~~~L~~~g 85 (231)
T COG0860 42 GKTIVID-PGHGGKDPGAIGPNGTLEKDVTLDIAKRLRDLLRAEG 85 (231)
T ss_pred CeEEEEc-CCCCCCCCCccCCCCCccceeHHHHHHHHHHHHHhCC
Confidence 4688899 999998753221 11 1234455566666555
No 306
>cd08770 DAP_dppA_3 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=27.89 E-value=2e+02 Score=23.82 Aligned_cols=56 Identities=23% Similarity=0.322 Sum_probs=39.3
Q ss_pred ccCCCceEEEecCCCCCCCcHHHHHHHHhCCCceEEEeC--CCCCCCccChHHHHHHHHHHHhc
Q 021980 233 SKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLVNFQ--AGHCPHDEVPELVNKALMDWLST 294 (304)
Q Consensus 233 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~--~GH~~~~e~p~~~~~~i~~fl~~ 294 (304)
....+|+.++.|++- ..++..+..|..+.+.+. -|....--.|++..+.|++=.++
T Consensus 144 g~~gVPV~lvsGD~~------~~~ea~~~~P~~~tv~vK~~~g~aa~~~~p~~a~~~I~~~~~~ 201 (263)
T cd08770 144 AYLGVPVVFVSGDAG------LCAEAKELNPNIVTVPVKEGFGGATISIHPGLACKEIRKGVKK 201 (263)
T ss_pred hhcCCCEEEEecCHH------HHHHHHHhCCCceEEEeeeeeccccccCCHHHHHHHHHHHHHH
Confidence 567899999999642 234456778999988884 25444445788888888776644
No 307
>cd08663 DAP_dppA_1 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=27.76 E-value=2.2e+02 Score=23.70 Aligned_cols=55 Identities=18% Similarity=0.269 Sum_probs=38.8
Q ss_pred ccCCCceEEEecCCCCCCCcHHHHHHHHhCCCceEEEeC--CC-CCCCccChHHHHHHHHHHHh
Q 021980 233 SKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLVNFQ--AG-HCPHDEVPELVNKALMDWLS 293 (304)
Q Consensus 233 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~--~G-H~~~~e~p~~~~~~i~~fl~ 293 (304)
....+|+.++.|++ ...++..+..|..+.+.++ -| +..---.|++..+.|++=.+
T Consensus 144 g~~gVPV~lVsGDd------~~~~ea~~~~p~i~tv~vK~~~gr~aa~~~~p~~a~~~I~~~a~ 201 (266)
T cd08663 144 GEYGVPVVLVTGDD------AACAEARELGPGVETVAVKEAIGRFAARCLPPAEARALIREAAA 201 (266)
T ss_pred hhcCCCEEEEecCH------HHHHHHHhhCCCcEEEEEecccCCCccccCCHHHHHHHHHHHHH
Confidence 56789999999964 2234456689999998884 25 44445568888777777664
No 308
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=27.31 E-value=79 Score=30.56 Aligned_cols=20 Identities=30% Similarity=0.496 Sum_probs=17.1
Q ss_pred CCeEEEEechhHHHHHHHHh
Q 021980 95 EPAVLVGNSLGGFAALVAAV 114 (304)
Q Consensus 95 ~~~~lvGhS~Gg~va~~~a~ 114 (304)
.--++.|.|+||.+|..+|.
T Consensus 66 ~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 66 RVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCceEEeeCHHHHHHHHHHc
Confidence 33489999999999999996
No 309
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=26.66 E-value=63 Score=27.99 Aligned_cols=18 Identities=33% Similarity=0.464 Sum_probs=16.0
Q ss_pred EEEEechhHHHHHHHHhc
Q 021980 98 VLVGNSLGGFAALVAAVG 115 (304)
Q Consensus 98 ~lvGhS~Gg~va~~~a~~ 115 (304)
.+.|.|.||.+|..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 688999999999999864
No 310
>PRK10431 N-acetylmuramoyl-l-alanine amidase II; Provisional
Probab=26.46 E-value=85 Score=28.30 Aligned_cols=15 Identities=27% Similarity=0.481 Sum_probs=12.3
Q ss_pred cEEEecCCCCCCCCcc
Q 021980 57 KVYAVDLLGFGWSEKA 72 (304)
Q Consensus 57 ~vi~~D~~G~G~S~~~ 72 (304)
-+|++| ||||..|+.
T Consensus 192 ~vIvID-pGHGG~DpG 206 (445)
T PRK10431 192 VIIAID-AGHGGQDPG 206 (445)
T ss_pred eEEEEe-CCCCCCCCC
Confidence 379999 999998753
No 311
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=26.26 E-value=85 Score=23.69 Aligned_cols=21 Identities=33% Similarity=0.487 Sum_probs=17.0
Q ss_pred CeEEEEechhHHHHHHHHhcC
Q 021980 96 PAVLVGNSLGGFAALVAAVGL 116 (304)
Q Consensus 96 ~~~lvGhS~Gg~va~~~a~~~ 116 (304)
.-.+.|-|.||.+|..++...
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC-
T ss_pred ccEEEEcChhhhhHHHHHhCC
Confidence 348999999999998888763
No 312
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=26.05 E-value=1.4e+02 Score=24.96 Aligned_cols=19 Identities=37% Similarity=0.578 Sum_probs=16.9
Q ss_pred EEEEechhHHHHHHHHhcC
Q 021980 98 VLVGNSLGGFAALVAAVGL 116 (304)
Q Consensus 98 ~lvGhS~Gg~va~~~a~~~ 116 (304)
.++|-|.||.+|..++..+
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 7889999999999998754
No 313
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=25.54 E-value=1.1e+02 Score=28.59 Aligned_cols=21 Identities=38% Similarity=0.537 Sum_probs=16.0
Q ss_pred CCCeEEEEechhHHHHHHHHh
Q 021980 94 KEPAVLVGNSLGGFAALVAAV 114 (304)
Q Consensus 94 ~~~~~lvGhS~Gg~va~~~a~ 114 (304)
.++++++|-|.||.+.+..|.
T Consensus 468 gEriv~aGDSAGgNL~~~VaL 488 (880)
T KOG4388|consen 468 GERIVLAGDSAGGNLCFTVAL 488 (880)
T ss_pred cceEEEeccCCCcceeehhHH
Confidence 368999999999986554443
No 314
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=25.42 E-value=1.2e+02 Score=22.85 Aligned_cols=48 Identities=15% Similarity=0.331 Sum_probs=26.9
Q ss_pred chHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEechh
Q 021980 48 NIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLG 105 (304)
Q Consensus 48 ~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~G 105 (304)
+...+. .-.||+.|-+|-- ++...+++.+.+.... +.+-+++||-+.|
T Consensus 59 il~~~~-~~~~i~LDe~Gk~--------~sS~~fA~~l~~~~~~-g~~i~FvIGGa~G 106 (153)
T TIGR00246 59 ILAAIG-KAHVVTLDIPGKP--------WTTPQLADTLEKWKTD-GRDVTLLIGGPEG 106 (153)
T ss_pred HHHhCC-CCeEEEEcCCCCc--------CCHHHHHHHHHHHhcc-CCeEEEEEcCCCc
Confidence 334444 3468889988742 3344455555554322 2233578888877
No 315
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=25.40 E-value=79 Score=17.70 Aligned_cols=33 Identities=21% Similarity=0.533 Sum_probs=20.5
Q ss_pred cCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEE
Q 021980 55 RYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLV 100 (304)
Q Consensus 55 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lv 100 (304)
+.+|..+|+-||+. .+++.++++.+..++++++
T Consensus 6 ~a~v~~~~fSgHad-------------~~~L~~~i~~~~p~~vilV 38 (43)
T PF07521_consen 6 RARVEQIDFSGHAD-------------REELLEFIEQLNPRKVILV 38 (43)
T ss_dssp -SEEEESGCSSS-B-------------HHHHHHHHHHHCSSEEEEE
T ss_pred EEEEEEEeecCCCC-------------HHHHHHHHHhcCCCEEEEe
Confidence 35677777766641 1577788888866555554
No 316
>cd00281 DAP_dppA Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacterized
Probab=24.60 E-value=2.8e+02 Score=23.12 Aligned_cols=55 Identities=16% Similarity=0.261 Sum_probs=37.9
Q ss_pred ccCCCceEEEecCCCCCCCcHHHHHHHHhCCCceEEEeC--CCC-CCCccChHHHHHHHHHHHh
Q 021980 233 SKLSCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLVNFQ--AGH-CPHDEVPELVNKALMDWLS 293 (304)
Q Consensus 233 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~--~GH-~~~~e~p~~~~~~i~~fl~ 293 (304)
....+|+.++.|++- ..++..+.+|..+.+.+. -|+ ..---.|++..+.|++=.+
T Consensus 143 g~~gVPV~lvsGDd~------~~~ea~~~~P~~~tv~vK~~~gr~aa~~~~p~~a~~~I~~~a~ 200 (265)
T cd00281 143 GYYGVPVVMVAGDAE------VCKEAKAYDAQVETVVTKKGMGRFSVKAPSPQKVLRAIREGTE 200 (265)
T ss_pred hhcCCCEEEEecCHH------HHHHHHHhCCCceEEEEeeeeCCCccccCCHHHHHHHHHHHHH
Confidence 567899999999642 234456778999998884 354 3444567777777776653
No 317
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=23.57 E-value=62 Score=24.13 Aligned_cols=22 Identities=23% Similarity=0.542 Sum_probs=15.0
Q ss_pred HHHHHhcCCCeEEEEechhHHH
Q 021980 87 DFLKEIVKEPAVLVGNSLGGFA 108 (304)
Q Consensus 87 ~~~~~~~~~~~~lvGhS~Gg~v 108 (304)
+.+.....+-.+++|.|.|+++
T Consensus 60 ~~i~~~~~~G~vi~G~SAGA~i 81 (154)
T PF03575_consen 60 EAIREAYRKGGVIIGTSAGAMI 81 (154)
T ss_dssp HHHHHHHHTTSEEEEETHHHHC
T ss_pred HHHHHHHHCCCEEEEEChHHhh
Confidence 3344433344789999999977
No 318
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=23.00 E-value=1.3e+02 Score=22.77 Aligned_cols=52 Identities=23% Similarity=0.237 Sum_probs=32.6
Q ss_pred cEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEec-hhHHHHHHHHhcC
Q 021980 57 KVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNS-LGGFAALVAAVGL 116 (304)
Q Consensus 57 ~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS-~Gg~va~~~a~~~ 116 (304)
+|+.+|.+.. ..++.+.+++.+.+.+++.+ -.++|+|+| .|.-++-.+|.+.
T Consensus 54 ~v~~~~~~~~-------~~~~~~~~a~al~~~i~~~~-p~~Vl~~~t~~g~~la~rlAa~L 106 (168)
T cd01715 54 KVLVAEDPAL-------AHYLAEPYAPALVALAKKEK-PSHILAGATSFGKDLAPRVAAKL 106 (168)
T ss_pred EEEEecChhh-------cccChHHHHHHHHHHHHhcC-CCEEEECCCccccchHHHHHHHh
Confidence 5666654422 23455566777878777654 467888876 5556777777653
No 319
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.91 E-value=1.5e+02 Score=24.24 Aligned_cols=18 Identities=44% Similarity=0.719 Sum_probs=16.3
Q ss_pred EEEEechhHHHHHHHHhc
Q 021980 98 VLVGNSLGGFAALVAAVG 115 (304)
Q Consensus 98 ~lvGhS~Gg~va~~~a~~ 115 (304)
.++|-|-||.+|..++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 688999999999999876
No 320
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=22.55 E-value=1.6e+02 Score=20.46 Aligned_cols=67 Identities=19% Similarity=0.184 Sum_probs=37.6
Q ss_pred CCCcEEEEcccCCChhhHHhchHHHhccCcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhc----CCCeEEEEec
Q 021980 28 EGSPVVLIHGFGASAFHWRYNIPELAKRYKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIV----KEPAVLVGNS 103 (304)
Q Consensus 28 ~g~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~lvGhS 103 (304)
..|.|+|---+......-+.++..+...+.|+=+|...+|. ++.+.+..+. .-.++|-|.+
T Consensus 13 ~~~VVifSKs~C~~c~~~k~ll~~~~v~~~vvELD~~~~g~---------------eiq~~l~~~tg~~tvP~vFI~Gk~ 77 (104)
T KOG1752|consen 13 ENPVVIFSKSSCPYCHRAKELLSDLGVNPKVVELDEDEDGS---------------EIQKALKKLTGQRTVPNVFIGGKF 77 (104)
T ss_pred cCCEEEEECCcCchHHHHHHHHHhCCCCCEEEEccCCCCcH---------------HHHHHHHHhcCCCCCCEEEECCEE
Confidence 35666776644444433444444445557888888775542 2223333333 2346777899
Q ss_pred hhHHHH
Q 021980 104 LGGFAA 109 (304)
Q Consensus 104 ~Gg~va 109 (304)
.||.--
T Consensus 78 iGG~~d 83 (104)
T KOG1752|consen 78 IGGASD 83 (104)
T ss_pred EcCHHH
Confidence 998643
No 321
>PF01520 Amidase_3: N-acetylmuramoyl-L-alanine amidase; InterPro: IPR002508 The cell wall envelope of Gram-positive bacteria is a macromolecular, exoskeletal organelle that is assembled and turned over at designated sites. The cell wall also functions as a surface organelle that allows Gram-positive pathogens to interact with their environment, in particular the tissues of the infected host. All of these functions require that surface proteins and enzymes be properly targeted to the cell wall envelope. Two basic mechanisms, cell wall sorting and targeting, have been identified. Cell well sorting is the covalent attachment of surface proteins to the peptidoglycan via a C-terminal sorting signal that contains a consensus LPXTG sequence. More than 100 proteins that possess cell wall-sorting signals, including the M proteins of Streptococcus pyogenes, protein A of Staphylococcus aureus, and several internalins of Listeria monocytogenes, have been identified. Cell wall targeting involves the noncovalent attachment of proteins to the cell surface via specialised binding domains. Several of these wall-binding domains appear to interact with secondary wall polymers that are associated with the peptidoglycan, for example teichoic acids and polysaccharides. Proteins that are targeted to the cell surface include muralytic enzymes such as autolysins, lysostaphin, and phage lytic enzymes. Other examples for targeted proteins are the surface S-layer proteins of bacilli and clostridia, as well as virulence factors required for the pathogenesis of L. monocytogenes (internalin B) and Streptococcus pneumoniae (PspA) infections []. Autolysin 3.5.1.28 from EC hydrolyses the link between N-acetylmuramoyl residues and L-amino acid residues in certain bacterial cell wall glycopeptides.; GO: 0008745 N-acetylmuramoyl-L-alanine amidase activity, 0009253 peptidoglycan catabolic process; PDB: 3QAY_A 3CZX_A 1JWQ_A 1XOV_A 3NE8_A.
Probab=22.51 E-value=75 Score=24.08 Aligned_cols=12 Identities=25% Similarity=0.473 Sum_probs=8.4
Q ss_pred EEecCCCCCCCCc
Q 021980 59 YAVDLLGFGWSEK 71 (304)
Q Consensus 59 i~~D~~G~G~S~~ 71 (304)
|++| ||||..++
T Consensus 1 I~id-pGHgg~d~ 12 (175)
T PF01520_consen 1 IVID-PGHGGNDP 12 (175)
T ss_dssp EEEE-EEEBTTBT
T ss_pred CEEE-CCCCCCCC
Confidence 4566 89987754
No 322
>PRK13753 dihydropteroate synthase; Provisional
Probab=22.50 E-value=1.5e+02 Score=24.86 Aligned_cols=47 Identities=17% Similarity=0.171 Sum_probs=25.1
Q ss_pred EEEecCCCCCC--CCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEechhHHHHH
Q 021980 58 VYAVDLLGFGW--SEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNSLGGFAAL 110 (304)
Q Consensus 58 vi~~D~~G~G~--S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS~Gg~va~ 110 (304)
=|.+| ||.|. +.....++. ....+.++... ..-.+|+|+|==++++-
T Consensus 169 ~IilD-PGiGF~k~k~~~~n~~---ll~~l~~l~~~--~g~PvLvg~SRKsfig~ 217 (279)
T PRK13753 169 RLILD-PGMGFFLSPAPETSLH---VLSNLQKLKSA--LGLPLLVSVSRKSFLGA 217 (279)
T ss_pred hEEEe-CCCCCCCCCChHHHHH---HHHhHHHHHHh--CCCceEEEccHhHHHHH
Confidence 47888 89987 433222221 11222222111 35568999997666653
No 323
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=22.31 E-value=1.7e+02 Score=24.61 Aligned_cols=48 Identities=21% Similarity=0.278 Sum_probs=29.9
Q ss_pred HHHHHHHHHhcC---CCeEEEEechhHHHHHHH---HhcCCcceeEEEEecCCC
Q 021980 83 DQIVDFLKEIVK---EPAVLVGNSLGGFAALVA---AVGLPDQVTGVALLNSAG 130 (304)
Q Consensus 83 ~~l~~~~~~~~~---~~~~lvGhS~Gg~va~~~---a~~~p~~v~~lvli~~~~ 130 (304)
+.+.+.+..+.. -+++|.|.|+|+.-+... ....-+++.+.+.++++.
T Consensus 94 ~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 94 EAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred HHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 444444455432 268999999998654442 223346788888887643
No 324
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=22.24 E-value=4.4e+02 Score=22.00 Aligned_cols=57 Identities=16% Similarity=0.211 Sum_probs=40.0
Q ss_pred CCceEEEecCCCCCCCcHHHHHHHHhCCCceEEEe-CCCCCCCccChHHH----HHHHHHHHhcc
Q 021980 236 SCPLLLLWGDLDPWVGSAKATRIKEFYPNTTLVNF-QAGHCPHDEVPELV----NKALMDWLSTV 295 (304)
Q Consensus 236 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~-~~GH~~~~e~p~~~----~~~i~~fl~~~ 295 (304)
+.|+.++= ..+-......++.+..|+..++.+ |..++|.-+.+++. .-.+.+||.+.
T Consensus 5 ~~~IgvFD---SGVGGLsVlrei~~~LP~e~~iY~~D~a~~PYG~ks~e~I~~~~~~i~~~l~~~ 66 (269)
T COG0796 5 QPPIGVFD---SGVGGLSVLREIRRQLPDEDIIYVGDTARFPYGEKSEEEIRERTLEIVDFLLER 66 (269)
T ss_pred CCeEEEEE---CCCCcHHHHHHHHHHCCCCcEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 45777772 244446778899999999999888 89999997766643 33455555443
No 325
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=22.20 E-value=1.2e+02 Score=25.93 Aligned_cols=60 Identities=23% Similarity=0.238 Sum_probs=40.1
Q ss_pred CcEEEecC-CCCCCCCcc---hhhhchhhHHHHHHHHHHHhc-------CCCeEEEEechhHHHHHHHHhc
Q 021980 56 YKVYAVDL-LGFGWSEKA---IIEYDAMVWKDQIVDFLKEIV-------KEPAVLVGNSLGGFAALVAAVG 115 (304)
Q Consensus 56 ~~vi~~D~-~G~G~S~~~---~~~~~~~~~~~~l~~~~~~~~-------~~~~~lvGhS~Gg~va~~~a~~ 115 (304)
-.++-+|- -|.|.|.-. ....+....+.|+.++++.+- -.|++|+-.|.||-.|..++..
T Consensus 72 adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~ 142 (414)
T KOG1283|consen 72 ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALE 142 (414)
T ss_pred ccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhh
Confidence 45677775 488877422 122234456677777776542 2489999999999998888764
No 326
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=22.07 E-value=18 Score=30.66 Aligned_cols=63 Identities=25% Similarity=0.342 Sum_probs=38.6
Q ss_pred CcEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHh---cCCCeEEEEechhHHHHHHHHhcCCcceeEE
Q 021980 56 YKVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEI---VKEPAVLVGNSLGGFAALVAAVGLPDQVTGV 123 (304)
Q Consensus 56 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 123 (304)
+++..+++.|||.+. ...........- +++..+ ++.|. .+|+|+|-...+-.+....+.+.+.
T Consensus 120 ~~~~~~~l~GHsmGG-~~~~m~~t~~~p---~~~~rliv~D~sP~-~~~~~~~e~~e~i~~m~~~d~~~~~ 185 (315)
T KOG2382|consen 120 TRLDPVVLLGHSMGG-VKVAMAETLKKP---DLIERLIVEDISPG-GVGRSYGEYRELIKAMIQLDLSIGV 185 (315)
T ss_pred cccCCceecccCcch-HHHHHHHHHhcC---cccceeEEEecCCc-cCCcccchHHHHHHHHHhccccccc
Confidence 478999999999886 211111110000 112222 22344 8999999999999998887766544
No 327
>cd01985 ETF The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=22.04 E-value=1.4e+02 Score=22.86 Aligned_cols=51 Identities=22% Similarity=0.225 Sum_probs=32.7
Q ss_pred cEEEecCCCCCCCCcchhhhchhhHHHHHHHHHHHhcCCCeEEEEec-hhHHHHHHHHhc
Q 021980 57 KVYAVDLLGFGWSEKAIIEYDAMVWKDQIVDFLKEIVKEPAVLVGNS-LGGFAALVAAVG 115 (304)
Q Consensus 57 ~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvGhS-~Gg~va~~~a~~ 115 (304)
+++..+-+.. ..++.+.+++.+.+++++.+ -.++|+|++ .|+.++-.+|.+
T Consensus 62 ~v~~~~~~~~-------~~~~~~~~a~~l~~~i~~~~-p~~Vl~g~t~~g~~la~rlA~~ 113 (181)
T cd01985 62 KVLLVEDPAL-------AGYDPEATAKALAALIKKEK-PDLILAGATSIGKQLAPRVAAL 113 (181)
T ss_pred EEEEEecCcc-------cCCChHHHHHHHHHHHHHhC-CCEEEECCcccccCHHHHHHHH
Confidence 5777665432 23445566777777777654 457888865 566777777765
No 328
>PRK11071 esterase YqiA; Provisional
Probab=21.88 E-value=3.8e+02 Score=20.68 Aligned_cols=53 Identities=15% Similarity=0.087 Sum_probs=31.9
Q ss_pred ceEEEecCCCCCCCcH---HHHHHHHhCCCceEEEeC-CCCCCCccChHHHHHHHHHHHhccC
Q 021980 238 PLLLLWGDLDPWVGSA---KATRIKEFYPNTTLVNFQ-AGHCPHDEVPELVNKALMDWLSTVK 296 (304)
Q Consensus 238 P~lii~G~~D~~~~~~---~~~~~~~~~~~~~~~~~~-~GH~~~~e~p~~~~~~i~~fl~~~~ 296 (304)
|++++||-.-..-..+ ....+.+..++.+++..+ .|| |+...+.+.+++++..
T Consensus 3 ~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~------~~~~~~~l~~l~~~~~ 59 (190)
T PRK11071 3 TLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPY------PADAAELLESLVLEHG 59 (190)
T ss_pred eEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCC------HHHHHHHHHHHHHHcC
Confidence 6899999654332222 112333444566666655 465 6778888888887643
No 329
>PF05973 Gp49: Phage derived protein Gp49-like (DUF891); InterPro: IPR009241 This entry consists of several hypothetical viral and bacterial proteins some are annotated as addiction module killer proteins.
Probab=21.68 E-value=96 Score=20.58 Aligned_cols=23 Identities=35% Similarity=0.566 Sum_probs=15.6
Q ss_pred cCeeEEEEecCCCCcEEEEcccCC
Q 021980 17 RGHKIHYVVQGEGSPVVLIHGFGA 40 (304)
Q Consensus 17 ~g~~~~y~~~g~g~~iv~lHG~~~ 40 (304)
+..++.|...++ ..+|++||+.=
T Consensus 51 ~~~Ri~y~~~~~-~~ivll~~f~K 73 (91)
T PF05973_consen 51 NIYRILYFFDGG-DIIVLLHGFIK 73 (91)
T ss_pred CcceEEEEEcCc-cEEEEEEEEEe
Confidence 356777775544 37899999743
No 330
>PF00809 Pterin_bind: Pterin binding enzyme This Prosite entry is a subset of the Pfam family; InterPro: IPR000489 The ~250-residue pterin-binding domain has been shown to adopt a (beta/alpha)8 barrel fold, which has the overall shape of a distorted cylinder. It has eight alpha-helices stacked around the outside of an inner cylinder of parallel beta-strands. The pterin ring binds at the bottom of the (beta/alpha;)8 barrel in a polar cup-like region that is relatively solvent exposed and fairly negatively charged. The pterin ring is partially buried within the (beta/alpha)8 barrel. The pterin binding residues are highly conserved and include aspartate and asparagine residues located at the C terminus of the beta-strands of the barrel, which are predicted to form hydrogen bonds with the nitrogen and oxygen atoms of the pterin ring [, , ]. Some proteins known to contain a pterin-binding domain are listed below: Prokaryotic and eukaryotic B12-dependent methionine synthase (MetH) (2.1.1.13 from EC), a large, modular protein that catalyzes the transfer of a methyl group from methyltetrahydrofolate (CH3-H4folate) to Hcy to form methionine, using cobalamin as an intermediate methyl carrier. Prokaryotic and eukaryotic dihydropteroate synthase (DHPS) (2.5.1.15 from EC). It catalyzes the condensation of para-aminobenzoic acid (pABA) with 7,8- dihydropterin-pyrophosphate (DHPPP), eliminating pyrophosphate to form 7,8- dihydropteroate which is subsequently converted to tetrahydrofolate. Moorella thermoacetica 5-methyltetrahydrofolate corrinoid/iron sulphur protein methyltransferase (MeTr). It transfers the N5-methyl group from CH3-H4folate to a cob(I)amide centre in another protein, the corrinoid iron sulphur protein. ; GO: 0042558 pteridine-containing compound metabolic process; PDB: 2VP8_B 2BMB_A 2Y5S_B 2Y5J_A 3BOF_B 1Q7Q_B 1Q85_B 1Q7Z_A 1Q7M_A 1Q8A_B ....
Probab=21.41 E-value=1.9e+02 Score=22.93 Aligned_cols=13 Identities=23% Similarity=0.547 Sum_probs=8.1
Q ss_pred cEEEecCCCCCCCC
Q 021980 57 KVYAVDLLGFGWSE 70 (304)
Q Consensus 57 ~vi~~D~~G~G~S~ 70 (304)
.=+.+| ||.|.+.
T Consensus 164 ~~Ii~D-Pgigf~~ 176 (210)
T PF00809_consen 164 ERIILD-PGIGFGK 176 (210)
T ss_dssp GGEEEE-TTTTSST
T ss_pred HHEeec-cccCcCC
Confidence 446677 6777643
No 331
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=21.18 E-value=97 Score=29.01 Aligned_cols=33 Identities=30% Similarity=0.224 Sum_probs=25.2
Q ss_pred EEEEechhHHHHHHHHhcC-CcceeEEEEecCCC
Q 021980 98 VLVGNSLGGFAALVAAVGL-PDQVTGVALLNSAG 130 (304)
Q Consensus 98 ~lvGhS~Gg~va~~~a~~~-p~~v~~lvli~~~~ 130 (304)
|--+-|=||..++..|.+. ...|.+++..+|..
T Consensus 288 IAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v 321 (690)
T PF10605_consen 288 IASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNV 321 (690)
T ss_pred EEEeecCccHHHHhHhhcccCCceeeEEecCCcc
Confidence 4446788999998888875 45799999888743
No 332
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=21.14 E-value=1e+02 Score=26.65 Aligned_cols=19 Identities=47% Similarity=0.529 Sum_probs=14.7
Q ss_pred eEEEEechhHHHHHHHHhc
Q 021980 97 AVLVGNSLGGFAALVAAVG 115 (304)
Q Consensus 97 ~~lvGhS~Gg~va~~~a~~ 115 (304)
-.++|||+|=..|+..+..
T Consensus 126 ~~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAGA 144 (343)
T ss_pred CeeeeccHHHHHHHHHhCC
Confidence 3679999999887776643
No 333
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=20.53 E-value=1.6e+02 Score=25.89 Aligned_cols=18 Identities=28% Similarity=0.447 Sum_probs=16.5
Q ss_pred EEEEechhHHHHHHHHhc
Q 021980 98 VLVGNSLGGFAALVAAVG 115 (304)
Q Consensus 98 ~lvGhS~Gg~va~~~a~~ 115 (304)
.++|-|.|+.+|..++..
T Consensus 47 ~IaGtSAGALvAAl~asG 64 (382)
T cd07219 47 RVAGTSAGSVIAALVVCG 64 (382)
T ss_pred eEEEEcHHHHHHHHHHhC
Confidence 699999999999999876
No 334
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=20.22 E-value=98 Score=18.10 Aligned_cols=26 Identities=12% Similarity=0.354 Sum_probs=20.8
Q ss_pred hchhhHHHHHHHHHHHhcCCCeEEEE
Q 021980 76 YDAMVWKDQIVDFLKEIVKEPAVLVG 101 (304)
Q Consensus 76 ~~~~~~~~~l~~~~~~~~~~~~~lvG 101 (304)
+..+.|-.|+...|..+.+.++.++|
T Consensus 6 w~PqSWM~DLrS~I~~~~I~ql~ipG 31 (51)
T PF03490_consen 6 WHPQSWMSDLRSSIGEMAITQLFIPG 31 (51)
T ss_pred cCcHHHHHHHHHHHhcceeeeEEecc
Confidence 34456778999999988888888887
Done!