BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021981
(304 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FFK1|SYP31_ARATH Syntaxin-31 OS=Arabidopsis thaliana GN=SYP31 PE=1 SV=1
Length = 336
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/340 (61%), Positives = 240/340 (70%), Gaps = 40/340 (11%)
Query: 1 MASPYRDRTAEFRSLSQTLKKIGGATTAVDQPNNSFVSPKPPNPASSRSEFNKKASRIGL 60
M S +RDRT E SLSQTLKKIG A +V Q + S K +P S EFNKKASRIGL
Sbjct: 1 MGSTFRDRTVELHSLSQTLKKIG-AIPSVHQDEDDPASSKRSSPGS---EFNKKASRIGL 56
Query: 61 GIHEASQKIARLAKY----------------------------------LQTLQNLEIVE 86
GI E SQKI RLAK LQTLQN+E+ +
Sbjct: 57 GIKETSQKITRLAKLAKQSTIFNDRTVEIQELTVLIRNDITGLNMALSDLQTLQNMELAD 116
Query: 87 GNYSQDRVVHSTTVCDDLKSKLMGATKELQDVLTTRTENIKAHESRKQIFSANALRDSPF 146
GNYSQD+V H T VCDDLK++LMGATK+LQDVLTTR+EN+KAHE+RKQ+FS DSP
Sbjct: 117 GNYSQDQVGHYTAVCDDLKTRLMGATKQLQDVLTTRSENMKAHENRKQLFSTKNAVDSPP 176
Query: 147 RQHAQPVTEPPPWSSPVNASESSQPSALPP--GGVQVGNQLRRRPAVDNAPSHHMEMSML 204
+ +A+ V EPPPWSS N + Q LPP G G+QLRRR A++NAPS MEMS+L
Sbjct: 177 QNNAKSVPEPPPWSSSSNPFGNLQQPLLPPLNTGAPPGSQLRRRSAIENAPSQQMEMSLL 236
Query: 205 QQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANV 264
QQ VP+QENYSQSRAVALH+VES ITEL GIF LATMV QQGELAIRIDDNMDESL NV
Sbjct: 237 QQTVPKQENYSQSRAVALHSVESRITELSGIFPQLATMVTQQGELAIRIDDNMDESLVNV 296
Query: 265 EGARNALLRHLNQISSNRWLMIKIFAVIIFFLTVFMFFVA 304
EGAR+ALL+HL +ISSNRWLM+KIFAVII FL VF+FFVA
Sbjct: 297 EGARSALLQHLTRISSNRWLMMKIFAVIILFLIVFLFFVA 336
>sp|Q9LK09|SYP32_ARATH Syntaxin-32 OS=Arabidopsis thaliana GN=SYP32 PE=2 SV=1
Length = 347
Score = 235 bits (599), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 158/352 (44%), Positives = 204/352 (57%), Gaps = 62/352 (17%)
Query: 3 SPYRDRTAEFRSLSQTLKK-IGGATTAVDQP--NNSFVSPKPPNPASSRSEFNKKASRIG 59
S YRDR+ EF + +TL++ I A A + P NN + + + +SEFNK+AS IG
Sbjct: 8 SSYRDRSDEFFKIVETLRRSIAPAPAANNVPYGNNRNDGARREDLIN-KSEFNKRASHIG 66
Query: 60 LGIHEASQKIARLAKY----------LQTLQNLEIV------------------------ 85
L I++ SQK+++LAK Q +Q L +V
Sbjct: 67 LAINQTSQKLSKLAKLAKRTSVFDDPTQEIQELTVVIKQEISALNSALVDLQLFRSSQND 126
Query: 86 EGNYSQDR--VVHSTTVCDDLKSKLMGATKELQDVLTTRTENIKAHESRKQIFSANALRD 143
EGN S+DR HS TV DDLK +LM TKE +DVLT RTEN+K HESR+Q+FS+NA ++
Sbjct: 127 EGNNSRDRDKSTHSATVVDDLKYRLMDTTKEFKDVLTMRTENMKVHESRRQLFSSNASKE 186
Query: 144 S--PF-RQH------AQPVTEPPPWSSPVNASESSQPSALP--PGGVQVGNQLRRRPAVD 192
S PF RQ A + P PW+ N S SS +P PG + L++
Sbjct: 187 STNPFVRQRPLAAKAAASESVPLPWA---NGSSSSSSQLVPWKPGEGESSPLLQQSQQQQ 243
Query: 193 NAPSHHMEMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIR 252
M VP Q+ Y Q RA ALH VESTI EL IFT LATMV+QQGE+AIR
Sbjct: 244 QQQQQQM--------VPLQDTYMQGRAEALHTVESTIHELSSIFTQLATMVSQQGEIAIR 295
Query: 253 IDDNMDESLANVEGARNALLRHLNQISSNRWLMIKIFAVIIFFLTVFMFFVA 304
ID NM+++LANVEGA++ L R+LN ISSNRWLM+KIF V+I FL +F+FFVA
Sbjct: 296 IDQNMEDTLANVEGAQSQLARYLNSISSNRWLMMKIFFVLIAFLMIFLFFVA 347
>sp|O13644|SED5_SCHPO Integral membrane protein sed5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=sed5 PE=3 SV=1
Length = 309
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 161/329 (48%), Gaps = 56/329 (17%)
Query: 5 YRDRTAEFRSLSQTLKKIGGATTAVDQPNNSFVSPKPPNPASSRSEFNKKASRIGLGIHE 64
++DRTAEF++ + TTA N V P +SEF + A +I I++
Sbjct: 3 FQDRTAEFQACVTKTRSRLRTTTA-----NQAVGG-PDQTKHQKSEFTRIAQKIANQINQ 56
Query: 65 ASQKIARLAKYL---------------------QTLQNL--------EIVEGNYSQDRVV 95
+K+ +L++ Q+L +L ++V+GN ++ +
Sbjct: 57 TGEKLQKLSQLAKRKTLFDDRPVEIQELTFQIKQSLSSLNSDIASLQQVVKGNRNKPAQM 116
Query: 96 --HSTTVCDDLKSKLMGATKELQDVLTTRTENIKAHESRKQIFSANALRDSPFRQHAQPV 153
HS V L++ L + +D+L RT+N+KA ++R + F A++ +A P+
Sbjct: 117 NQHSENVVVSLQNSLANTSMTFKDILEIRTQNMKASQNRTEKFVASS------SMNANPL 170
Query: 154 TEPPPWSSPVNASESSQPSALPPG-GVQVGNQLRRRPAVDNAPSHHMEMSMLQQVVPRQE 212
SP +P A + +G D A + + +M++L+ + +
Sbjct: 171 INSGNSISPFADYNDPKPEANEDYLSLNLG---------DGANTRYEQMALLE---SQTD 218
Query: 213 NYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALL 272
YSQ R ++ N+ESTITELGGIF+ LA MV++Q E RID + D+ ++N+ A+ ++
Sbjct: 219 TYSQQRMSSIQNIESTITELGGIFSQLAQMVSEQRETVQRIDMHTDDIVSNIGSAQREIV 278
Query: 273 RHLNQISSNRWLMIKIFAVIIFFLTVFMF 301
+ ++SSNR L+ KIF ++I F +++
Sbjct: 279 KFYERMSSNRALLFKIFGIVIIFFLLWVL 307
>sp|Q20797|STX3_CAEEL Putative syntaxin-3 OS=Caenorhabditis elegans GN=syn-3 PE=3 SV=1
Length = 413
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 146/316 (46%), Gaps = 59/316 (18%)
Query: 4 PYRDRTAEFRSLSQTLKKIGGATTAVDQPNNSFVSPKPPNPASSRS-EFNKKASRIGLGI 62
P RDRT+EFR+ +++ + A + P+P + S S +FN+ A RIG +
Sbjct: 108 PSRDRTSEFRATAKSYEMKAAANG---------IRPQPKHEMLSESVQFNQLAKRIGKEL 158
Query: 63 HEASQKIARLAKYLQTLQNLE----------IVE---------------------GNYSQ 91
+ K+ +LA+Y + E IV+ GN
Sbjct: 159 SQTCAKMEKLAEYAKKKSCYEERSQIDHLSSIVKSDITGLNKQIGQLQEFSKRRAGNMKN 218
Query: 92 DRVVHSTTVCDDLKSKLMGATKELQDVLTTRTENIKAHESRKQIFSANALRDSPFRQHAQ 151
H V L+SKL K+ Q VL TE +KA ++R+ FS+ A
Sbjct: 219 QNSGHIQLVVVGLQSKLANVGKDYQSVLEISTETMKAEKNRRDKFSSGA----------- 267
Query: 152 PVTEPPPWSSPVNASESSQPSALPPGGVQVGNQLRRRPAVDNAPSHHMEMSMLQQVVPRQ 211
P P ++S ++ S L Q G+ A+D +M+ Q
Sbjct: 268 ----AVPMGLPSSSSGANVRSKLLQDDEQHGSS---SIALDMGALSNMQSQQTMQQRDSS 320
Query: 212 ENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNAL 271
Y+Q+R+ + +E +I+ELG IF+ LA++V++QGE+ RID N++++ N++ A + L
Sbjct: 321 LEYAQARSNTMATIEGSISELGQIFSQLASLVSEQGEMITRIDSNVEDTALNIDMAHSEL 380
Query: 272 LRHLNQISSNRWLMIK 287
+R+L IS NRWLMI+
Sbjct: 381 VRYLQNISKNRWLMIQ 396
>sp|Q08DB5|STX5_BOVIN Syntaxin-5 OS=Bos taurus GN=STX5 PE=2 SV=1
Length = 355
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 144/307 (46%), Gaps = 51/307 (16%)
Query: 6 RDRTAEFRSLSQTLK-KIGG------ATTAVDQPN--------------NSFVS-PKPPN 43
RDRT EF S ++L+ + G A AV Q + N+F K
Sbjct: 58 RDRTQEFLSACKSLQSRQNGIQANKPALRAVRQRSEFTLMAKRIGKDLSNTFAKLEKLTI 117
Query: 44 PASSRSEFNKKASRIGLGIHEASQKIARLAKYLQTLQNLEIVEGNYSQDRV-VHSTTVCD 102
A +S F+ KA I + Q I L K + LQ+ +G+ S + HS T+
Sbjct: 118 LAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVV 177
Query: 103 DLKSKLMGATKELQDVLTTRTENIKAHESRKQIFSANALRDSPFRQHAQPVTEPPPWSSP 162
L+SKL + + + VL RTEN+K SR++ FS PV+ P
Sbjct: 178 SLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSRA------------PVSALPLA--- 222
Query: 163 VNASESSQPSALPPGGVQVGNQLRRRP--AVDNAPSHHMEMSMLQQVVPRQENYSQSRAV 220
P+ L G V +G + R A+D S S Q++ Q++Y QSRA
Sbjct: 223 --------PNHLGGGAVVLGAESRASGDVAIDMMDSR---TSQQLQLIDEQDSYIQSRAD 271
Query: 221 ALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISS 280
+ N+ESTI ELG IF LA MV +Q E RID+N+ + +VE A + +L++ ++S
Sbjct: 272 TMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTS 331
Query: 281 NRWLMIK 287
NRWLM+K
Sbjct: 332 NRWLMVK 338
>sp|Q13190|STX5_HUMAN Syntaxin-5 OS=Homo sapiens GN=STX5 PE=1 SV=2
Length = 355
Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 144/307 (46%), Gaps = 51/307 (16%)
Query: 6 RDRTAEFRSLSQTLK-KIGGATT------AVDQPN--------------NSFVS-PKPPN 43
RDRT EF S ++L+ + G T AV Q + N+F K
Sbjct: 58 RDRTQEFLSACKSLQTRQNGIQTNKPALRAVRQRSEFTLMAKRIGKDLSNTFAKLEKLTI 117
Query: 44 PASSRSEFNKKASRIGLGIHEASQKIARLAKYLQTLQNLEIVEGNYSQDRV-VHSTTVCD 102
A +S F+ KA I + Q I L K + LQ+ +G+ S + HS T+
Sbjct: 118 LAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVV 177
Query: 103 DLKSKLMGATKELQDVLTTRTENIKAHESRKQIFSANALRDSPFRQHAQPVTEPPPWSSP 162
L+SKL + + + VL RTEN+K SR++ FS PV+ P
Sbjct: 178 SLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSRA------------PVSALPLA--- 222
Query: 163 VNASESSQPSALPPGGVQVG--NQLRRRPAVDNAPSHHMEMSMLQQVVPRQENYSQSRAV 220
P+ L G V +G + + A+D S S Q++ Q++Y QSRA
Sbjct: 223 --------PNHLGGGAVVLGAESHASKDVAIDMMDSR---TSQQLQLIDEQDSYIQSRAD 271
Query: 221 ALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISS 280
+ N+ESTI ELG IF LA MV +Q E RID+N+ + +VE A + +L++ ++S
Sbjct: 272 TMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTS 331
Query: 281 NRWLMIK 287
NRWLM+K
Sbjct: 332 NRWLMVK 338
>sp|Q08851|STX5_RAT Syntaxin-5 OS=Rattus norvegicus GN=Stx5 PE=1 SV=2
Length = 355
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 124/247 (50%), Gaps = 31/247 (12%)
Query: 45 ASSRSEFNKKASRIGLGIHEASQKIARLAKYLQTLQNLEIVEGNYSQDRV-VHSTTVCDD 103
A +S F+ KA I + Q I L K + LQ+ +G+ S + HS T+
Sbjct: 119 AKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVS 178
Query: 104 LKSKLMGATKELQDVLTTRTENIKAHESRKQIFSANALRDSPFRQHAQPVTEPPPWSSPV 163
L+SKL + + + VL RTEN+K +R++ FS PV+ P
Sbjct: 179 LQSKLASMSNDFKSVLEVRTENLKQQRNRREQFSR------------APVSALPLA---- 222
Query: 164 NASESSQPSALPPGGVQVGNQLR--RRPAVDNA-PSHHMEMSMLQQVVPRQENYSQSRAV 220
P+ L G + +G + R R A+D P ++ Q++ Q++Y QSRA
Sbjct: 223 -------PNNLGGGPIVLGGESRASRDVAIDMMDPRTSQQL----QLIDEQDSYIQSRAD 271
Query: 221 ALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISS 280
+ N+ESTI ELG IF LA MV +Q E RID+N+ + +VE A + +L++ ++S
Sbjct: 272 TMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTS 331
Query: 281 NRWLMIK 287
NRWLM+K
Sbjct: 332 NRWLMVK 338
>sp|Q8K1E0|STX5_MOUSE Syntaxin-5 OS=Mus musculus GN=Stx5 PE=1 SV=3
Length = 355
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 124/247 (50%), Gaps = 31/247 (12%)
Query: 45 ASSRSEFNKKASRIGLGIHEASQKIARLAKYLQTLQNLEIVEGNYSQDRV-VHSTTVCDD 103
A +S F+ KA I + Q I L K + LQ+ +G+ S + HS T+
Sbjct: 119 AKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVS 178
Query: 104 LKSKLMGATKELQDVLTTRTENIKAHESRKQIFSANALRDSPFRQHAQPVTEPPPWSSPV 163
L+SKL + + + VL RTEN+K +R++ FS PV+ P
Sbjct: 179 LQSKLASMSNDFKSVLEVRTENLKQQRNRREQFSR------------APVSALPLA---- 222
Query: 164 NASESSQPSALPPGGVQVGNQLR--RRPAVDNA-PSHHMEMSMLQQVVPRQENYSQSRAV 220
P+ L G + +G + R R A+D P ++ Q++ Q++Y QSRA
Sbjct: 223 -------PNNLGGGPIILGAESRASRDVAIDMMDPRTSQQL----QLIDEQDSYIQSRAD 271
Query: 221 ALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISS 280
+ N+ESTI ELG IF LA MV +Q E RID+N+ + +VE A + +L++ ++S
Sbjct: 272 TMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTS 331
Query: 281 NRWLMIK 287
NRWLM+K
Sbjct: 332 NRWLMVK 338
>sp|Q24509|STX5_DROME Syntaxin-5 OS=Drosophila melanogaster GN=Syx5 PE=2 SV=2
Length = 467
Score = 104 bits (260), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 141/316 (44%), Gaps = 58/316 (18%)
Query: 6 RDRTAEFRSLSQTLKKIGGATTAVDQPNNSFVSPKPPNPASSRSEFNKKASRIGLGIHEA 65
RDRT EF + ++L+ T AV+ P+ S SEF A IG I
Sbjct: 161 RDRTGEFANAIRSLQA-RNITRAVN-----IRDPRKAKQVQSYSEFMMVARFIGKNIAST 214
Query: 66 SQKIARLA-----KYL-----QTLQNLE-IVEGNY-------------SQDR-------- 93
K+ +L K L Q +Q L I++G+ S+D+
Sbjct: 215 YAKLEKLTMLAKKKSLFDDRPQEIQELTYIIKGDLNALNQQIARLQDISKDQRRHTNGKH 274
Query: 94 -VVHSTTVCDDLKSKLMGATKELQDVLTTRTENIKAHESRKQIFSANALRDSPFRQHAQP 152
V HS+ + L+SKL + + + +L RTEN+K ++R+ FS P A
Sbjct: 275 LVSHSSNMVLALQSKLASMSTDFKQILEVRTENLKQQKTRRDQFS-----QGPGPLAAHT 329
Query: 153 VTEPPPWSSPVNASESSQPSALPPGGVQVGNQLRRRPAVDNAPSHHMEMSMLQQVVPRQE 212
V+ + SE +Q ++ G + D P + M + +
Sbjct: 330 VSPSTAKQGSLLLSEENQAVSIDMG------------SSDTTPLLSTQTQMA--IYDDSD 375
Query: 213 NYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALL 272
NY Q RA + N+ESTI ELGGIF LA MV +Q E+ RID N+ ++ N+E A +L
Sbjct: 376 NYVQQRAETMQNIESTIVELGGIFQQLAHMVKEQEEIVERIDTNVADAELNIEAAHGEIL 435
Query: 273 RHLNQISSNRWLMIKI 288
++ +S NRWLMIKI
Sbjct: 436 KYFQSVSKNRWLMIKI 451
>sp|Q01590|SED5_YEAST Integral membrane protein SED5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SED5 PE=1 SV=1
Length = 340
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%)
Query: 214 YSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLR 273
Y Q R A+ +ESTI E+G +F LA+MV +QGE+ RID N+D+ N+ GA+ LL+
Sbjct: 251 YLQERNRAVETIESTIQEVGNLFQQLASMVQEQGEVIQRIDANVDDIDLNISGAQRELLK 310
Query: 274 HLNQISSNRWLMIK 287
+ ++I SNRWL K
Sbjct: 311 YFDRIKSNRWLAAK 324
>sp|P32854|PEP12_YEAST Syntaxin PEP12 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PEP12 PE=1 SV=2
Length = 288
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 211 QENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNA 270
Q+N + R + N+E ITEL +F L ++V QQG L I+ N+ + N + A +
Sbjct: 194 QQNLIEQRDQEISNIERGITELNEVFKDLGSVVQQQGVLVDNIEANIYTTSDNTQLASDE 253
Query: 271 LLRHLN-QISSNRW 283
L + + Q ++RW
Sbjct: 254 LRKAMRYQKRTSRW 267
>sp|Q08850|STX4_RAT Syntaxin-4 OS=Rattus norvegicus GN=Stx4 PE=1 SV=1
Length = 298
Score = 38.9 bits (89), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 206 QVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVE 265
QV + N +R + +E TI EL IFT LAT V QGE+ RI+ N+ S VE
Sbjct: 194 QVTRQALNEISARHSEIQQLERTIRELHEIFTFLATEVEMQGEMINRIEKNILSSADYVE 253
Query: 266 -GARNALLRHLNQISSNRWLMIKIFAVIIFFLTVFMFFV 303
G + + NQ + + K+ I +TV + V
Sbjct: 254 RGQEHVKIALENQKKARKK---KVMIAICVSVTVLILAV 289
>sp|Q9P6P1|TLG2_SCHPO t-SNARE affecting a late Golgi compartment protein 2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tlg2 PE=3 SV=1
Length = 301
Score = 38.9 bits (89), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 202 SMLQQVVPRQENYSQSRAV----ALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNM 257
S +QQV +E +A+ A+ + I EL +F L +V +QG L RID N+
Sbjct: 192 STIQQVALMEEQGEDEQAIRHERAVAKIAEGIIELAQMFQDLQVLVIEQGALVDRIDFNI 251
Query: 258 DESLANVEGARNALLR-HLNQISSNRWLMIKIFAVIIFFLTVFM 300
+++ + + A L++ +Q ++ R I ++I L V +
Sbjct: 252 EQTQVHAKSAEKELIKAESHQKNTGRLRFICFLILLIVALIVIL 295
>sp|Q12846|STX4_HUMAN Syntaxin-4 OS=Homo sapiens GN=STX4 PE=1 SV=2
Length = 297
Score = 37.7 bits (86), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 206 QVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVE 265
QV + N +R + +E +I EL IFT LAT V QGE+ RI+ N+ S VE
Sbjct: 194 QVTRQALNEISARHSEIQQLERSIRELHDIFTFLATEVEMQGEMINRIEKNILSSADYVE 253
Query: 266 GARNALLRHL-NQISSNRWLMIKIFAVIIFFLTVFMFFV 303
+ + L NQ + + K+ I +TV + V
Sbjct: 254 RGQEHVKTALENQKKARKK---KVLIAICVSITVVLLAV 289
>sp|P70452|STX4_MOUSE Syntaxin-4 OS=Mus musculus GN=Stx4 PE=1 SV=1
Length = 298
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 206 QVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVE 265
QV + N +R + +E +I EL IFT LAT V QGE+ RI+ N+ S VE
Sbjct: 194 QVTRQALNEISARHSEIQQLERSIRELHEIFTFLATEVEMQGEMINRIEKNILSSADYVE 253
Query: 266 -GARNALLRHLNQISSNRWLMIKIFAVIIFFLTVFMFFV 303
G + + NQ + + K+ I +TV + V
Sbjct: 254 RGQEHVKIALENQKKARKK---KVMIAICVSVTVLILAV 289
>sp|P61265|STX1B_RAT Syntaxin-1B OS=Rattus norvegicus GN=Stx1b PE=1 SV=1
Length = 288
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 200 EMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDE 259
++ M Q+ + N ++R + +E++I EL +F +A +V QGE+ RI+ N++
Sbjct: 179 DIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEH 238
Query: 260 SLANVEGARNALLRHLNQISSNRW--LMIKIFAVII 293
S+ VE A + + + S R +MI I V++
Sbjct: 239 SVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVL 274
>sp|P61264|STX1B_MOUSE Syntaxin-1B OS=Mus musculus GN=Stx1b PE=1 SV=1
Length = 288
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 200 EMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDE 259
++ M Q+ + N ++R + +E++I EL +F +A +V QGE+ RI+ N++
Sbjct: 179 DIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEH 238
Query: 260 SLANVEGARNALLRHLNQISSNRW--LMIKIFAVII 293
S+ VE A + + + S R +MI I V++
Sbjct: 239 SVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVL 274
>sp|P61266|STX1B_HUMAN Syntaxin-1B OS=Homo sapiens GN=STX1B PE=1 SV=1
Length = 288
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 200 EMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDE 259
++ M Q+ + N ++R + +E++I EL +F +A +V QGE+ RI+ N++
Sbjct: 179 DIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEH 238
Query: 260 SLANVEGARNALLRHLNQISSNRW--LMIKIFAVII 293
S+ VE A + + + S R +MI I V++
Sbjct: 239 SVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVL 274
>sp|P61268|STX1B_SHEEP Syntaxin-1B OS=Ovis aries GN=STX1B PE=2 SV=1
Length = 288
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 200 EMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDE 259
++ M Q+ + N ++R + +E++I EL +F +A +V QGE+ RI+ N++
Sbjct: 179 DIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEH 238
Query: 260 SLANVEGARNALLRHLNQISSNRW--LMIKIFAVII 293
S+ VE A + + + S R +MI I V++
Sbjct: 239 SVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVL 274
>sp|P61267|STX1B_BOVIN Syntaxin-1B OS=Bos taurus GN=STX1B PE=1 SV=1
Length = 288
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 200 EMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDE 259
++ M Q+ + N ++R + +E++I EL +F +A +V QGE+ RI+ N++
Sbjct: 179 DIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEH 238
Query: 260 SLANVEGARNALLRHLNQISSNRW--LMIKIFAVII 293
S+ VE A + + + S R +MI I V++
Sbjct: 239 SVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVL 274
>sp|Q12241|VAM3_YEAST Syntaxin VAM3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=VAM3 PE=1 SV=1
Length = 283
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 216 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLR 273
Q R+ + + + + E+ IF L ++V +QGE ID+N+ N++ A L R
Sbjct: 194 QERSQQIGRIHTAVQEVNAIFHQLGSLVKEQGEQVTTIDENISHLHDNMQNANKQLTR 251
>sp|O65359|SYP41_ARATH Syntaxin-41 OS=Arabidopsis thaliana GN=SYP41 PE=1 SV=1
Length = 322
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 186 RRRPAVDNAPSHHMEMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQ 245
R RP D+ E M + + + E S R + V ++ +L I L+ +V
Sbjct: 202 RYRPEEDDFGDMLNEHQMSK--IKKSEEVSVEREKEIQQVVESVNDLAQIMKDLSALVID 259
Query: 246 QGELAIRIDDNMDESLANVEGARNAL------LRHLNQISSNRWLMIKIFAVIIFFLTVF 299
QG + RID N++ VE L RH + L+I F +++ +
Sbjct: 260 QGTIVDRIDYNIENVATTVEDGLKQLQKAERTQRHGGMVKCASVLVILCFIMLLLLILKE 319
Query: 300 MFF 302
+F
Sbjct: 320 IFL 322
>sp|Q3SWZ3|STX4_BOVIN Syntaxin-4 OS=Bos taurus GN=STX4 PE=2 SV=1
Length = 297
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 206 QVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVE 265
QV + N +R + +E +I EL IFT LAT V QGE+ RI+ N+ S VE
Sbjct: 194 QVTRQALNEISARHSEIQQLERSIRELHEIFTFLATEVEMQGEMINRIEKNILSSADYVE 253
Query: 266 -GARNALLRHLNQISSNRWLMIKIFAVIIFFLT 297
G + + NQ + + K+F I +T
Sbjct: 254 RGQEHVKVALENQKKARKK---KVFIAICLSIT 283
>sp|Q9ZPV9|SY112_ARATH Syntaxin-112 OS=Arabidopsis thaliana GN=SYP112 PE=2 SV=2
Length = 305
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 12/100 (12%)
Query: 206 QVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLAN-- 263
+V P + ++ R A+++++ ++ L +F +A +V QG+ RIDD ++ ++AN
Sbjct: 204 EVKPEMDLKTKERHEAVNDIKRSLNRLHQVFLDMAVLVETQGD---RIDD-IEANVANAG 259
Query: 264 --VEGARNALLRHLNQI--SSNRW-LMIKIFAVIIFFLTV 298
V G N+L + NQ+ + W L + I V+I + V
Sbjct: 260 SFVSGGTNSLY-YANQMKKKTKSWVLWVSILGVLILLVCV 298
>sp|O70439|STX7_MOUSE Syntaxin-7 OS=Mus musculus GN=Stx7 PE=1 SV=3
Length = 261
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 11/106 (10%)
Query: 206 QVVPRQENYSQSRAVALHNVESTITELGG-------IFTHLATMVAQQGELAIRIDDNMD 258
QV + E ++ +H ES+I +L IF L M+ +QG++ I+ N++
Sbjct: 152 QVQVQDEEITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDMIDSIEANVE 211
Query: 259 ESLANVEGARNALLRHLNQISSNRWLMIKIFAVIIFFLTVFMFFVA 304
+ +V+ A L R + +R K +IIF L V + +
Sbjct: 212 SAEVHVQQANQQLSRAADYQRKSR----KTLCIIIFILVVRIVIIC 253
>sp|Q39233|SYP21_ARATH Syntaxin-21 OS=Arabidopsis thaliana GN=SYP21 PE=1 SV=1
Length = 279
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
Query: 196 SHHMEMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDD 255
S E+ L + E + R + +E I ++ G+F LA MV QG + I
Sbjct: 170 SRRQEVVFLDNEITFNEAIIEEREQGIREIEDQIRDVNGMFKDLALMVNHQGNIVDDISS 229
Query: 256 NMDESLANVEGARNALLRHLNQISSNR---WLMIKIFA 290
N+D S A A L + SN L+I IF
Sbjct: 230 NLDNSHAATTQATVQLRKAAKTQRSNSSLTCLLILIFG 267
>sp|Q20024|STX1_CAEEL Putative syntaxin-1 OS=Caenorhabditis elegans GN=syn-1 PE=3 SV=3
Length = 306
Score = 36.2 bits (82), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 13/94 (13%)
Query: 216 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMD-------ESLANVEGAR 268
+SRA L N+E + EL +F L MV QGE+ I ++++ ++ NVE AR
Sbjct: 208 KSRADELKNLERQMGELAQMFHDLHIMVVSQGEMVDSIVNSVENATEYAKQARGNVEEAR 267
Query: 269 NALLRHLNQISSNRWLMIKIFAVIIFFLTVFMFF 302
N Q + + + I II L + +F
Sbjct: 268 NL------QKRARKMKVCIIIGSIIAVLILILFI 295
>sp|P32856|STX2_HUMAN Syntaxin-2 OS=Homo sapiens GN=STX2 PE=1 SV=3
Length = 288
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 206 QVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVE 265
Q+ + N +SR + +E++I EL +F +A V QGE+ I+ N+ + VE
Sbjct: 185 QITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMINNIERNVMNATDYVE 244
Query: 266 GARNAL---LRHLNQISSNRWLMIKIFAVIIFFLTVFM 300
A+ +++ ++ +W++I + V++ + + +
Sbjct: 245 HAKEETKKAIKYQSKARRKKWIIIAVSVVLVAIIALII 282
>sp|P32850|STX1A_BOVIN Syntaxin-1A OS=Bos taurus GN=STX1A PE=1 SV=1
Length = 288
Score = 35.8 bits (81), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 216 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHL 275
++R + +E++I EL +F +A +V QGE+ RI+ N++ S+ VE A + + +
Sbjct: 196 ETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHSVDYVERAVSDTKKAV 255
Query: 276 NQISSNRW--LMIKIFAVIIFFLTVFMF 301
S R +MI I V++ + F
Sbjct: 256 KYQSKARRKKIMIVICCVVLGIVIASTF 283
>sp|O16000|STX1A_CAEEL Syntaxin-1A homolog OS=Caenorhabditis elegans GN=unc-64 PE=1 SV=1
Length = 291
Score = 35.4 bits (80), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 221 ALHN----VESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLN 276
A HN +ES+I EL +F +A +V QGE+ RI+ N++ + V+ A + +
Sbjct: 198 ARHNDIMKLESSIRELHDMFMDMAMLVESQGEMVDRIEYNVEHAKEFVDRAVADTKKAVQ 257
Query: 277 QISSNRWLMIKIF---AVIIFFLTVFMFFVA 304
S R I I ++I L +F+ F A
Sbjct: 258 YQSKARRKKICILVTGVILITGLIIFILFYA 288
>sp|O35526|STX1A_MOUSE Syntaxin-1A OS=Mus musculus GN=Stx1a PE=1 SV=3
Length = 288
Score = 35.4 bits (80), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 216 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHL 275
++R + +E++I EL +F +A +V QGE+ RI+ N++ ++ VE A + + +
Sbjct: 196 ETRHSEIIKLETSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAV 255
Query: 276 NQISSNRW--LMIKIFAVII 293
S R +MI I VI+
Sbjct: 256 KYQSKARRKKIMIIICCVIL 275
>sp|Q16623|STX1A_HUMAN Syntaxin-1A OS=Homo sapiens GN=STX1A PE=1 SV=1
Length = 288
Score = 35.0 bits (79), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 216 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHL 275
++R + +E++I EL +F +A +V QGE+ RI+ N++ ++ VE A + + +
Sbjct: 196 ETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAV 255
Query: 276 NQISSNRW--LMIKIFAVII 293
S R +MI I VI+
Sbjct: 256 KYQSKARRKKIMIIICCVIL 275
>sp|P32851|STX1A_RAT Syntaxin-1A OS=Rattus norvegicus GN=Stx1a PE=1 SV=1
Length = 288
Score = 34.7 bits (78), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 216 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHL 275
++R + +E++I EL +F +A +V QGE+ RI+ N++ ++ VE A + + +
Sbjct: 196 ETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAV 255
Query: 276 NQISSNRW--LMIKIFAVII 293
S R +MI I VI+
Sbjct: 256 KYQSKARRKKIMIIICCVIL 275
>sp|Q9SUJ1|SYP43_ARATH Syntaxin-43 OS=Arabidopsis thaliana GN=SYP43 PE=2 SV=2
Length = 331
Score = 34.7 bits (78), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 40/96 (41%)
Query: 208 VPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGA 267
+ + E S R + V +++EL I L+ +V QG + RID N+ + V+
Sbjct: 231 IKKSEEISIEREKEIQQVVESVSELAQIMKDLSALVIDQGTIVDRIDYNIQNVASTVDDG 290
Query: 268 RNALLRHLNQISSNRWLMIKIFAVIIFFLTVFMFFV 303
L + +M VI+ F+ + + +
Sbjct: 291 LKQLQKAERTQRQGGMVMCASVLVILCFIMLVLLIL 326
>sp|Q5R4L2|STX1A_PONAB Syntaxin-1A OS=Pongo abelii GN=STX1A PE=2 SV=1
Length = 288
Score = 34.7 bits (78), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 216 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHL 275
++R + +E++I EL +F +A +V QGE+ RI+ N++ ++ VE A + + +
Sbjct: 196 ETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAV 255
Query: 276 NQISSNRW--LMIKIFAVI 292
S R +MI I VI
Sbjct: 256 KYQSKARRKKIMIIICCVI 274
>sp|Q54CS2|CUL4_DICDI Cullin-4 OS=Dictyostelium discoideum GN=culD PE=3 SV=1
Length = 802
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 12/157 (7%)
Query: 5 YRDRTAEFRSLSQTLKKIGGATTAVDQPNNSFVSPKPPNPASSRSEFNKKASRIG---LG 61
Y+DR R LSQ+ K T A+ + F++ K PA + F ++G +
Sbjct: 377 YKDRLD--RILSQSFSKNELLTYALKESFEYFINTKQNKPAELVARFIDSKLKVGGKRMS 434
Query: 62 IHEASQKIARLAKYLQTLQNLEIVEGNYSQD----RVVHSTTVCDDLKSKLMGATKELQD 117
E + + + +Q ++ E Y QD ++ +T D KS + E
Sbjct: 435 EEELETVLNKSLILFRYIQGKDVFEAFYKQDLSKRLLLDKSTSIDAEKSMISKLKTECGT 494
Query: 118 VLTTRTENI-KAHESRKQIFSANALRDSPFRQHAQPV 153
T + E + K E I N+ RDSP Q+ + +
Sbjct: 495 TFTAKLEEMFKDIELSNDIM--NSFRDSPMTQNFKSI 529
>sp|Q24547|STX1A_DROME Syntaxin-1A OS=Drosophila melanogaster GN=Syx1A PE=1 SV=1
Length = 291
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 216 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHL 275
++R + +E++I EL +F +A +V QGE+ RI+ +++ ++ V+ A + L
Sbjct: 199 EARHQDIMKLETSIKELHDMFMDMAMLVESQGEMIDRIEYHVEHAMDYVQTATQDTKKAL 258
Query: 276 NQISSNRWLMIKIFAVIIFFLTVFMFFVA 304
S R I +I+ LTV A
Sbjct: 259 KYQSKARRKKI----MILICLTVLGILAA 283
>sp|Q8BVI5|STX16_MOUSE Syntaxin-16 OS=Mus musculus GN=Stx16 PE=1 SV=3
Length = 326
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 216 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNAL 271
+ R + + +I++L IF L M+ +QG + RID N+++S E L
Sbjct: 235 EEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCVKTEDGLKQL 290
>sp|Q16932|STX_APLCA Syntaxin OS=Aplysia californica PE=2 SV=1
Length = 290
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 209 PRQENYSQSRAVALHN----VESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANV 264
+Q N + + A HN +E++I +L +F +A +V QGE+ RI+ N+++++ +
Sbjct: 187 TQQANETLADIEARHNDIMKLETSIRDLHDMFMDMAMLVESQGEMIDRIEYNVEQAVDYI 246
Query: 265 EGAR 268
E A+
Sbjct: 247 ETAK 250
>sp|Q54X86|STX7B_DICDI Probable syntaxin-7B OS=Dictyostelium discoideum GN=syn7B PE=3 SV=1
Length = 286
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 239 LATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISSNRWLMIKIFAVIIFFLTV 298
+A MV +QGE+ ++DDN+ + VE A L + SS R MI ++ L
Sbjct: 212 IAVMVGEQGEMLEKVDDNVTNADVAVEDAVVELEKAYVYKSSYRKKMIIFVICLLVTLVA 271
Query: 299 FMFFVA 304
F+A
Sbjct: 272 VGIFLA 277
>sp|O14662|STX16_HUMAN Syntaxin-16 OS=Homo sapiens GN=STX16 PE=1 SV=3
Length = 325
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 216 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNAL 271
+ R + + +I++L IF L M+ +QG + RID N+++S E L
Sbjct: 234 EEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQL 289
>sp|Q08144|TLG2_YEAST T-SNARE affecting a late Golgi compartment protein 2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TLG2 PE=1 SV=1
Length = 397
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 212 ENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNAL 271
E Y + R + + + E+ IF + +V QG + RID N++ ++ ++ A
Sbjct: 244 EAYLRERDEEITQLARGVLEVSTIFREMQDLVVDQGTIVDRIDYNLENTVVELKSAD--- 300
Query: 272 LRHLNQIS--SNRWLMIKIFAVIIFFLTVFMFFV 303
+ LN+ + R K+ ++ + FFV
Sbjct: 301 -KELNKATHYQKRTQKCKVILLLTLCVIALFFFV 333
>sp|P50279|STX2_RAT Syntaxin-2 OS=Rattus norvegicus GN=Stx2 PE=2 SV=2
Length = 290
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 206 QVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVE 265
Q+ + N +SR + +E++I EL +F +A V QGE+ I+ N+ S+ VE
Sbjct: 187 QITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMVNNIERNVVNSVDYVE 246
Query: 266 GAR 268
A+
Sbjct: 247 HAK 249
>sp|Q00262|STX2_MOUSE Syntaxin-2 OS=Mus musculus GN=Stx2 PE=1 SV=1
Length = 289
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 206 QVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVE 265
Q+ + N +SR + +E++I EL +F +A V QGE+ I+ N+ S+ VE
Sbjct: 186 QITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMVNNIERNVVNSVDYVE 245
Query: 266 GAR 268
A+
Sbjct: 246 HAK 248
>sp|P39926|SSO2_YEAST Protein SSO2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SSO2 PE=1 SV=2
Length = 295
Score = 31.6 bits (70), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 216 QSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVE---GARNALL 272
Q+R L +E T+ EL +F + +V +Q E ID N++++ +VE G N +
Sbjct: 198 QARHQELLKLEKTMAELTQLFNDMEELVIEQQENVDVIDKNVEDAQQDVEQGVGHTNKAV 257
Query: 273 RHLNQISSNRWLMIKIFAVIIF 294
+ + N+ + I IIF
Sbjct: 258 KSARKARKNKIRCL-IICFIIF 278
>sp|A8WVD0|STX1A_CAEBR Syntaxin-1A OS=Caenorhabditis briggsae GN=unc-64 PE=3 SV=1
Length = 293
Score = 31.6 bits (70), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Query: 221 ALHN----VESTITELGGIFTHLATMVAQQGELAIRIDDNMD 258
A HN +ES+I EL +F +A +V QGE+ RI+ N++
Sbjct: 200 ARHNDIMKLESSIRELHDMFMDMAMLVESQGEMVDRIEYNVE 241
>sp|Q47BK8|ISPH_DECAR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Dechloromonas
aromatica (strain RCB) GN=ispH PE=3 SV=1
Length = 306
Score = 31.6 bits (70), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 89 YSQDRVVHSTTVCDDLKSKLMGATKELQDVLTTRTENIKAHESRKQI 135
Y + VVH+ VCDDL++K +EL +V T AH K +
Sbjct: 34 YVRHEVVHNKFVCDDLRAKGAVFVEELDEVPAGSTVIFSAHGVSKAV 80
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.128 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,012,085
Number of Sequences: 539616
Number of extensions: 4009397
Number of successful extensions: 17383
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 17287
Number of HSP's gapped (non-prelim): 168
length of query: 304
length of database: 191,569,459
effective HSP length: 117
effective length of query: 187
effective length of database: 128,434,387
effective search space: 24017230369
effective search space used: 24017230369
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)