BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021982
(304 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 355 bits (912), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 169/300 (56%), Positives = 229/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 62 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 113
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAP
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 355 bits (912), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 169/300 (56%), Positives = 229/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 61 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 112
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAP
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 355 bits (912), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 169/300 (56%), Positives = 229/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 62 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 113
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAP
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 355 bits (912), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 169/300 (56%), Positives = 229/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 62 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 113
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAP
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 355 bits (911), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 169/300 (56%), Positives = 229/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 63 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 114
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAP
Sbjct: 115 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 173
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 355 bits (911), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 169/300 (56%), Positives = 229/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 69 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 120
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAP
Sbjct: 121 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 179
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 239
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 240 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 299
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 355 bits (911), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 169/300 (56%), Positives = 229/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 69 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 120
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAP
Sbjct: 121 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 179
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 239
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 240 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 299
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 355 bits (910), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 169/300 (56%), Positives = 229/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 66 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 117
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAP
Sbjct: 118 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 176
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 236
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 237 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 296
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 355 bits (910), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 169/300 (56%), Positives = 229/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++D DLKK++ + TG IP+ +KS ++QL
Sbjct: 65 -PNIVKLLDVIHTENK-----LYLVFEHVDQDLKKFMDASALTG--IPLPLIKSYLFQLL 116
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 354 bits (909), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 229/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 62 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 113
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G++FCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAP
Sbjct: 114 QGLSFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 354 bits (908), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 228/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 63 -PNIVKLLDVIHTENK-----LYLVFEFLSMDLKKFMDASALTG--IPLPLIKSYLFQLL 114
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 115 QGLAFCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 354 bits (908), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 228/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 65 -PNIVKLLDVIHTENK-----LYLVFEFLSMDLKKFMDASALTG--IPLPLIKSYLFQLL 116
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 117 QGLAFCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 353 bits (907), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 228/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 62 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 113
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 353 bits (907), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 228/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VAL K RL + EGVP T +RE+S+L+ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 62 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 113
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAP
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 353 bits (907), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 228/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VAL K RL + EGVP T +RE+S+L+ L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 61 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 112
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAP
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 353 bits (907), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 228/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 62 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 113
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 353 bits (907), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 228/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 61 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 112
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 171
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 353 bits (906), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 228/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 62 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 113
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 353 bits (906), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 228/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 63 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 114
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 115 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 353 bits (906), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 228/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 65 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 116
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 353 bits (906), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 228/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 64 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 115
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 234
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 235 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 353 bits (906), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 228/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 64 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 115
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 234
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 235 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 353 bits (906), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 228/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 63 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 114
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 115 QGLAFCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 353 bits (905), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 228/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 66 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 117
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 118 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 176
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 236
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 237 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 296
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 353 bits (905), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 168/299 (56%), Positives = 228/299 (76%), Gaps = 10/299 (3%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH- 60
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +
Sbjct: 61 PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQ 113
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAPE
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS 243
+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 232
Query: 244 LMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 233 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 353 bits (905), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 228/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 61 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 112
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 171
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 353 bits (905), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 228/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 65 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 116
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 353 bits (905), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 228/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 63 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 114
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 115 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 353 bits (905), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 228/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 64 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 115
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 116 QGLAFCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 234
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 235 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 352 bits (904), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 167/297 (56%), Positives = 226/297 (76%), Gaps = 10/297 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL
Sbjct: 62 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 113
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDD 298
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 352 bits (903), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 228/300 (76%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLK ++ + TG IP+ +KS ++QL
Sbjct: 61 -PNIVKLLDVIHTENK-----LYLVFEHVHQDLKTFMDASALTG--IPLPLIKSYLFQLL 112
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAP
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 352 bits (903), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 167/300 (55%), Positives = 227/300 (75%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLK ++ + TG IP+ +KS ++QL
Sbjct: 64 -PNIVKLLDVIHTENK-----LYLVFEFLSMDLKDFMDASALTG--IPLPLIKSYLFQLL 115
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 234
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 235 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 352 bits (903), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 167/300 (55%), Positives = 227/300 (75%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLK ++ + TG IP+ +KS ++QL
Sbjct: 65 -PNIVKLLDVIHTENK-----LYLVFEFLSMDLKDFMDASALTG--IPLPLIKSYLFQLL 116
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 351 bits (900), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 167/300 (55%), Positives = 227/300 (75%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLK ++ + TG IP+ +KS ++QL
Sbjct: 62 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKDFMDASALTG--IPLPLIKSYLFQLL 113
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 114 QGLAFCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 351 bits (900), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 167/300 (55%), Positives = 227/300 (75%), Gaps = 10/300 (3%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ F+K+EK+GEGTYG VY+AR K TG++VALKK RL + EGVP T +RE+S+L+ L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+L+DV +NK LYLVFE++ DLK ++ + TG IP+ +KS ++QL
Sbjct: 65 -PNIVKLLDVIHTENK-----LYLVFEFLHQDLKTFMDASALTG--IPLPLIKSYLFQLL 116
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+AFCH H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAP
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+LLG +YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 301
S+ ++ +P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 300 bits (768), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 151/301 (50%), Positives = 212/301 (70%), Gaps = 13/301 (4%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
+M+ ++KLEKVGEGTYG VY+A++ + G+IVALK+ RL +DEG+P T +RE+S+L+ L
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
P++V L+DV + L LVFE+M+ DLKK + +TG + + +K +YQL
Sbjct: 78 H-PNIVSLIDVIHSER-----CLTLVFEFMEKDLKKVLDE-NKTG--LQDSQIKIYLYQL 128
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
+GVA CH H ILHRDLKP NLL++ LK+AD GLARAF +P++ YTHE++TLWYRA
Sbjct: 129 LRGVAHCHQHRILHRDLKPQNLLINSDG-ALKLADFGLARAFGIPVRSYTHEVVTLWYRA 187
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
P+VL+GS YST+VD+WS+ CIFAE++T LFPG ++ QL IF +LGTPN + WP V
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQV 247
Query: 242 SSLMNWHE--YPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
L W + + + + ++ +P ++G+DLL ML +DP+KRISA+ AM HPYF DL
Sbjct: 248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307
Query: 300 D 300
D
Sbjct: 308 D 308
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 300 bits (768), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 151/301 (50%), Positives = 212/301 (70%), Gaps = 13/301 (4%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
+M+ ++KLEKVGEGTYG VY+A++ + G+IVALK+ RL +DEG+P T +RE+S+L+ L
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
P++V L+DV + L LVFE+M+ DLKK + +TG + + +K +YQL
Sbjct: 78 H-PNIVSLIDVIHSER-----CLTLVFEFMEKDLKKVLDE-NKTG--LQDSQIKIYLYQL 128
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
+GVA CH H ILHRDLKP NLL++ LK+AD GLARAF +P++ YTHE++TLWYRA
Sbjct: 129 LRGVAHCHQHRILHRDLKPQNLLINSDG-ALKLADFGLARAFGIPVRSYTHEVVTLWYRA 187
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
P+VL+GS YST+VD+WS+ CIFAE++T LFPG ++ QL IF +LGTPN + WP V
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQV 247
Query: 242 SSLMNWHE--YPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
L W + + + + ++ +P ++G+DLL ML +DP+KRISA+ AM HPYF DL
Sbjct: 248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307
Query: 300 D 300
D
Sbjct: 308 D 308
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 298 bits (763), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 151/297 (50%), Positives = 208/297 (70%), Gaps = 12/297 (4%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ + LEK+GEGTYG VY+A+ G+ ALKK RL ++DEG+P TT+RE+SIL+ L +
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKEL-K 58
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
++V+L DV + + L LVFE++D DLKK + E++ T KS + QL
Sbjct: 59 HSNIVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESV---TAKSFLLQLL 110
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
G+A+CH +LHRDLKP NLL++R+ LKIAD GLARAF +P++KYTHEI+TLWYRAP
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEIVTLWYRAP 169
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
+VL+GS YST +D+WSV CIFAE+V T LFPG SE QL+ IFR+LGTPN K WP V+
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVT 229
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDD 298
L + + + P + + LD+ G+DLL +ML+ DP++RI+AK+A+EH YF +
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 298 bits (762), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/297 (50%), Positives = 208/297 (70%), Gaps = 12/297 (4%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ + LEK+GEGTYG VY+A+ G+ ALKK RL ++DEG+P TT+RE+SIL+ L +
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKEL-K 58
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
++V+L DV + + L LVFE++D DLKK + E++ T KS + QL
Sbjct: 59 HSNIVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESV---TAKSFLLQLL 110
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
G+A+CH +LHRDLKP NLL++R+ LKIAD GLARAF +P++KYTHE++TLWYRAP
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVVTLWYRAP 169
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
+VL+GS YST +D+WSV CIFAE+V T LFPG SE QL+ IFR+LGTPN K WP V+
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVT 229
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDD 298
L + + + P + + LD+ G+DLL +ML+ DP++RI+AK+A+EH YF +
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 296 bits (758), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/297 (50%), Positives = 207/297 (69%), Gaps = 12/297 (4%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ + LEK+GEGTYG VY+A+ G+ ALKK RL ++DEG+P TT+RE+SIL+ L +
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKEL-K 58
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
++V+L DV + + L LVFE++D DLKK + E++ T KS + QL
Sbjct: 59 HSNIVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESV---TAKSFLLQLL 110
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
G+A+CH +LHRDLKP NLL++R+ LKIAD GLARAF +P++KYTHE++TLWYRAP
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVVTLWYRAP 169
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
+VL+GS YST +D+WSV CIFAE+V LFPG SE QL+ IFR+LGTPN K WP V+
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVT 229
Query: 243 SLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDD 298
L + + + P + + LD+ G+DLL +ML+ DP++RI+AK+A+EH YF +
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 294 bits (753), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 148/299 (49%), Positives = 201/299 (67%), Gaps = 12/299 (4%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M +EKLEK+GEGTYG V++A+ + T +IVALK+ RL +DDEGVP + LRE+ +L+ L +
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-K 59
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
++VRL DV K L LVFE+ D DLKKY F ++ VKS ++QL
Sbjct: 60 HKNIVRLHDVLHSDKK-----LTLVFEFCDQDLKKY---FDSCNGDLDPEIVKSFLFQLL 111
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
KG+ FCH +LHRDLKP NLL++R LK+AD GLARAF +P++ Y+ E++TLWYR P
Sbjct: 112 KGLGFCHSRNVLHRDLKPQNLLINRNG-ELKLADFGLARAFGIPVRCYSAEVVTLWYRPP 170
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKT-ALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
+VL G+ YST++DMWS CIFAEL LFPG+ QL IFRLLGTP E+ WP +
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSM 230
Query: 242 SSLMNWHEYPQWNP-QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+ L ++ YP + SL VP L+ G DLL+ +L+ +P +RISA++A++HPYF D
Sbjct: 231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 292 bits (747), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/299 (49%), Positives = 201/299 (67%), Gaps = 12/299 (4%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M +EKLEK+GEGTYG V++A+ + T +IVALK+ RL +DDEGVP + LRE+ +L+ L +
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-K 59
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
++VRL DV K L LVFE+ D DLKKY F ++ VKS ++QL
Sbjct: 60 HKNIVRLHDVLHSDKK-----LTLVFEFCDQDLKKY---FDSCNGDLDPEIVKSFLFQLL 111
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
KG+ FCH +LHRDLKP NLL++R LK+A+ GLARAF +P++ Y+ E++TLWYR P
Sbjct: 112 KGLGFCHSRNVLHRDLKPQNLLINRNG-ELKLANFGLARAFGIPVRCYSAEVVTLWYRPP 170
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTK-TALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
+VL G+ YST++DMWS CIFAEL LFPG+ QL IFRLLGTP E+ WP +
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSM 230
Query: 242 SSLMNWHEYPQWNP-QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+ L ++ YP + SL VP L+ G DLL+ +L+ +P +RISA++A++HPYF D
Sbjct: 231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 285 bits (730), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 150/306 (49%), Positives = 212/306 (69%), Gaps = 18/306 (5%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
+D + ++ K+GEGTYG+VY+A + T + VA+K+ RL ++EGVP T +REVS+L+ L
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH 92
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+++ L V ++ L+L+FEY + DLKKY+ ++ + +KS +YQL
Sbjct: 93 R-NIIELKSVIHHNHR-----LHLIFEYAENDLKKYM----DKNPDVSMRVIKSFLYQLI 142
Query: 123 KGVAFCHGHGILHRDLKPHNLLMD----RKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
GV FCH LHRDLKP NLL+ +T LKI D GLARAF +PI+++THEI+TLW
Sbjct: 143 NGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLW 202
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
YR PE+LLGS HYST+VD+WS+ACI+AE++ KT LFPGDSE+ QL IF +LG P++ W
Sbjct: 203 YRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTW 262
Query: 239 PGVSSLMNWHE-YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
PGV++L +W + +P++ ++L + LD +GLDLL ML+ DP KRISAK A+EHPYF
Sbjct: 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322
Query: 297 --DDLD 300
+D D
Sbjct: 323 SHNDFD 328
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 277 bits (708), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 140/296 (47%), Positives = 200/296 (67%), Gaps = 13/296 (4%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ + KL+K+GEGTY VY+ + K T +VALK+ RL E +EG P T +REVS+L+ L +
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRL-EHEEGAPCTAIREVSLLKDL-K 58
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
++V L D+ + L LVFEY+D DLK+Y+ G I ++ VK ++QL
Sbjct: 59 HANIVTLHDIIHTEKS-----LTLVFEYLDKDLKQYLDD---CGNIINMHNVKLFLFQLL 110
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+A+CH +LHRDLKP NLL++ + LK+AD GLARA ++P K Y +E++TLWYR P
Sbjct: 111 RGLAYCHRQKVLHRDLKPQNLLINERG-ELKLADFGLARAKSIPTKTYDNEVVTLWYRPP 169
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
++LLGST YST +DMW V CIF E+ T LFPG + +QL IFR+LGTP E+ WPG+
Sbjct: 170 DILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGIL 229
Query: 243 SLMNW--HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
S + + YP++ ++L + P LD DG DLL ++LQ++ RISA+ AM+HP+F
Sbjct: 230 SNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 265 bits (678), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/300 (46%), Positives = 200/300 (66%), Gaps = 18/300 (6%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
F++LEK+G GTY VY+ K TG VALK+ +L + +EG P T +RE+S+++ L + +
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKL-DSEEGTPSTAIREISLMKELKHE-N 64
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYI--RSFRQTGENIPVNTVKSLMYQLCK 123
+VRL DV +NK L LVFE+MD DLKKY+ R+ T + +N VK +QL +
Sbjct: 65 IVRLYDVIHTENK-----LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
G+AFCH + ILHRDLKP NLL++++ LK+ D GLARAF +P+ ++ E++TLWYRAP+
Sbjct: 120 GLAFCHENKILHRDLKPQNLLINKRGQ-LKLGDFGLARAFGIPVNTFSSEVVTLWYRAPD 178
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS 243
VL+GS YST++D+WS CI AE++T LFPG ++ +QL IF ++GTPNE +WP V+
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK 238
Query: 244 LMNWHEYPQWNP-----QSLA--TAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
L ++ Q P Q L T P LD + +D L +LQ +P R+SAK+A+ HP+F
Sbjct: 239 LPKYNPNIQQRPPRDLRQVLQPHTKEP-LDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 243 bits (620), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 194/301 (64%), Gaps = 9/301 (2%)
Query: 6 FEKLEKVGEGTYGKVYRARE-KATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS--R 62
+E + ++GEG YGKV++AR+ K G+ VALK+ R+ +EG+P +T+REV++LR L
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P+VVRL DV + T L LVFE++D DL Y+ + G +P T+K +M+QL
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG--VPTETIKDMMFQLL 130
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+ F H H ++HRDLKP N+L+ + +K+AD GLAR ++ + T ++TLWYRAP
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVT-SSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRAP 188
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
EVLL S+ Y+T VD+WSV CIFAE+ + LF G S++ QL I ++G P E+ WP
Sbjct: 189 EVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 243 SLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKT 302
+L + + Q + V ++D+ G DLL + L ++P+KRISA A+ HPYF DL++
Sbjct: 248 ALPR-QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC 306
Query: 303 R 303
+
Sbjct: 307 K 307
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 243 bits (620), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 194/301 (64%), Gaps = 9/301 (2%)
Query: 6 FEKLEKVGEGTYGKVYRARE-KATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS--R 62
+E + ++GEG YGKV++AR+ K G+ VALK+ R+ +EG+P +T+REV++LR L
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P+VVRL DV + T L LVFE++D DL Y+ + G +P T+K +M+QL
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG--VPTETIKDMMFQLL 130
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+ F H H ++HRDLKP N+L+ + +K+AD GLAR ++ + T ++TLWYRAP
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVT-SSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRAP 188
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
EVLL S+ Y+T VD+WSV CIFAE+ + LF G S++ QL I ++G P E+ WP
Sbjct: 189 EVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 243 SLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKT 302
+L + + Q + V ++D+ G DLL + L ++P+KRISA A+ HPYF DL++
Sbjct: 248 ALPR-QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC 306
Query: 303 R 303
+
Sbjct: 307 K 307
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 238 bits (608), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/298 (43%), Positives = 185/298 (62%), Gaps = 8/298 (2%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
M +E + ++G G YG VY+AR+ +G VALK R+ +EG+P +T+REV++LR L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 61 S--RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
P+VVRLMDV + + LVFE++D DL+ Y+ G +P T+K LM
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDLM 118
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
Q +G+ F H + I+HRDLKP N+L+ T+K+AD GLAR ++ + + ++TLW
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSGG-TVKLADFGLARIYSYQMALFP-VVVTLW 176
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
YRAPEVLL ST Y+T VDMWSV CIFAE+ + LF G+SE QL IF L+G P E W
Sbjct: 177 YRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P SL +P P+ + + VP +++ G LL +ML ++P KRISA +A++H Y
Sbjct: 236 PRDVSLPRG-AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 238 bits (606), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 130/298 (43%), Positives = 184/298 (61%), Gaps = 8/298 (2%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
M +E + ++G G YG VY+AR+ +G VALK R+ +EG+P +T+REV++LR L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 61 S--RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
P+VVRLMDV + + LVFE++D DL+ Y+ G +P T+K LM
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDLM 118
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
Q +G+ F H + I+HRDLKP N+L+ T+K+AD GLAR ++ + ++TLW
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSGG-TVKLADFGLARIYSYQMA-LAPVVVTLW 176
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
YRAPEVLL ST Y+T VDMWSV CIFAE+ + LF G+SE QL IF L+G P E W
Sbjct: 177 YRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P SL +P P+ + + VP +++ G LL +ML ++P KRISA +A++H Y
Sbjct: 236 PRDVSLPRG-AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 238 bits (606), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 189/294 (64%), Gaps = 9/294 (3%)
Query: 6 FEKLEKVGEGTYGKVYRARE-KATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS--R 62
+E + ++GEG YGKV++AR+ K G+ VALK+ R+ +EG+P +T+REV++LR L
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P+VVRL DV + T L LVFE++D DL Y+ + G +P T+K +M+QL
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG--VPTETIKDMMFQLL 130
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+ F H H ++HRDLKP N+L+ + +K+AD GLAR ++ + T ++TLWYRAP
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVT-SSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRAP 188
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
EVLL S+ Y+T VD+WSV CIFAE+ + LF G S++ QL I ++G P E+ WP
Sbjct: 189 EVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 243 SLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
+L + + Q + V ++D+ G DLL + L ++P+KRISA A+ HPYF
Sbjct: 248 ALPR-QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 237 bits (604), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 130/298 (43%), Positives = 184/298 (61%), Gaps = 8/298 (2%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
M +E + ++G G YG VY+AR+ +G VALK R+ +EG+P +T+REV++LR L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 61 S--RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
P+VVRLMDV + + LVFE++D DL+ Y+ G +P T+K LM
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDLM 118
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
Q +G+ F H + I+HRDLKP N+L+ T+K+AD GLAR ++ + ++TLW
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSGG-TVKLADFGLARIYSYQMA-LDPVVVTLW 176
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
YRAPEVLL ST Y+T VDMWSV CIFAE+ + LF G+SE QL IF L+G P E W
Sbjct: 177 YRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P SL +P P+ + + VP +++ G LL +ML ++P KRISA +A++H Y
Sbjct: 236 PRDVSLPRG-AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 227 bits (578), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 130/301 (43%), Positives = 183/301 (60%), Gaps = 11/301 (3%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEG---VPPTTLREVSIL 57
M +E + ++G G YG VY+AR+ +G VALK R+ G +P +T+REV++L
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 58 RMLS--RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVK 115
R L P+VVRLMDV + + LVFE++D DL+ Y+ G +P T+K
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIK 123
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
LM Q +G+ F H + I+HRDLKP N+L+ T+K+AD GLAR ++ + T ++
Sbjct: 124 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG-TVKLADFGLARIYSYQMA-LTPVVV 181
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
TLWYRAPEVLL ST Y+T VDMWSV CIFAE+ + LF G+SE QL IF L+G P E
Sbjct: 182 TLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240
Query: 236 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
WP SL +P P+ + + VP +++ G LL +ML ++P KRISA +A++H Y
Sbjct: 241 DDWPRDVSLPRG-AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 299
Query: 296 F 296
Sbjct: 300 L 300
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 219 bits (557), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 181/296 (61%), Gaps = 13/296 (4%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRL---HEDDEGVPPTTLREVSILRMLSR 62
+EKL+ +GEG + VY+AR+K T +IVA+KK +L E +G+ T LRE+ +L+ LS
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P+++ L+D ++ + LVF++M+TDL+ I+ + + +K+ M
Sbjct: 72 -PNIIGLLDAFGHKSN-----ISLVFDFMETDLEVIIKD---NSLVLTPSHIKAYMLMTL 122
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+G+ + H H ILHRDLKP+NLL+D + LK+AD GLA++F P + Y H+++T WYRAP
Sbjct: 123 QGLEYLHQHWILHRDLKPNNLLLDENGV-LKLADFGLAKSFGSPNRAYXHQVVTRWYRAP 181
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
E+L G+ Y VDMW+V CI AEL+ + PGDS+L QL IF LGTP E+ WP +
Sbjct: 182 ELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC 241
Query: 243 SLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDD 298
SL ++ + + L D LDL++ + ++P RI+A +A++ YF +
Sbjct: 242 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 297
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 181/301 (60%), Gaps = 13/301 (4%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
+M+ +EK+ K+GEG+YG V++ R + TG+IVA+KK EDD + LRE+ +L+ L
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL- 59
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
+ P++V L++V + + + L+LVFEY D + + +++ +P + VKS+ +Q
Sbjct: 60 KHPNLVNLLEVFRRKRR-----LHLVFEYCDHTVLHELDRYQR---GVPEHLVKSITWQT 111
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
+ V FCH H +HRD+KP N+L+ + ++ +K+ D G AR T P Y E+ T WYR+
Sbjct: 112 LQAVNFCHKHNCIHRDVKPENILITKHSV-IKLCDFGFARLLTGPSDYYDDEVATRWYRS 170
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG--TPNEKVWP 239
PE+L+G T Y VD+W++ C+FAEL++ L+PG S++ QL I + LG P +
Sbjct: 171 PELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVF 230
Query: 240 GVSSLMNWHEYPQ-WNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDD 298
+ + + P + + L PN+ L LL+ L DP++R++ ++ + HPYF++
Sbjct: 231 STNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFEN 290
Query: 299 L 299
+
Sbjct: 291 I 291
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 190 bits (482), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 177/302 (58%), Gaps = 16/302 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+EKL K+G+GT+G+V++AR + TG+ VALKK + + EG P T LRE+ IL++L + +
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE-N 78
Query: 66 VVRLMDV---KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
VV L+++ K + +YLVF++ + DL + + ++ +K +M L
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLL 135
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIK----KYTHEILTLW 178
G+ + H + ILHRD+K N+L+ R + LK+AD GLARAF+L +Y + ++TLW
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGV-LKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
YR PE+LLG Y +D+W CI AE+ T++ + G++E QL I +L G+ +VW
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 239 PGVSS--LMNWHEYPQWNPQSLATAVPNLDKD--GLDLLEQMLQYDPSKRISAKKAMEHP 294
P V + L E + + + + +D LDL++++L DP++RI + A+ H
Sbjct: 255 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 314
Query: 295 YF 296
+F
Sbjct: 315 FF 316
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 177/302 (58%), Gaps = 16/302 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+EKL K+G+GT+G+V++AR + TG+ VALKK + + EG P T LRE+ IL++L + +
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE-N 78
Query: 66 VVRLMDV---KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
VV L+++ K + +YLVF++ + DL + + ++ +K +M L
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLL 135
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIK----KYTHEILTLW 178
G+ + H + ILHRD+K N+L+ R + LK+AD GLARAF+L +Y + ++TLW
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGV-LKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
YR PE+LLG Y +D+W CI AE+ T++ + G++E QL I +L G+ +VW
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 239 PGVSS--LMNWHEYPQWNPQSLATAVPNLDKD--GLDLLEQMLQYDPSKRISAKKAMEHP 294
P V + L E + + + + +D LDL++++L DP++RI + A+ H
Sbjct: 255 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 314
Query: 295 YF 296
+F
Sbjct: 315 FF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 177/302 (58%), Gaps = 16/302 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+EKL K+G+GT+G+V++AR + TG+ VALKK + + EG P T LRE+ IL++L + +
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE-N 77
Query: 66 VVRLMDV---KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
VV L+++ K + +YLVF++ + DL + + ++ +K +M L
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLL 134
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIK----KYTHEILTLW 178
G+ + H + ILHRD+K N+L+ R + LK+AD GLARAF+L +Y + ++TLW
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGV-LKLADFGLARAFSLAKNSQPNRYXNRVVTLW 193
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
YR PE+LLG Y +D+W CI AE+ T++ + G++E QL I +L G+ +VW
Sbjct: 194 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 253
Query: 239 PGVSS--LMNWHEYPQWNPQSLATAVPNLDKD--GLDLLEQMLQYDPSKRISAKKAMEHP 294
P V + L E + + + + +D LDL++++L DP++RI + A+ H
Sbjct: 254 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 313
Query: 295 YF 296
+F
Sbjct: 314 FF 315
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 177/302 (58%), Gaps = 16/302 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+EKL K+G+GT+G+V++AR + TG+ VALKK + + EG P T LRE+ IL++L + +
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE-N 78
Query: 66 VVRLMDV---KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
VV L+++ K + +YLVF++ + DL + + ++ +K +M L
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLL 135
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIK----KYTHEILTLW 178
G+ + H + ILHRD+K N+L+ R + LK+AD GLARAF+L +Y + ++TLW
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGV-LKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
YR PE+LLG Y +D+W CI AE+ T++ + G++E QL I +L G+ +VW
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 239 PGVSS--LMNWHEYPQWNPQSLATAVPNLDKD--GLDLLEQMLQYDPSKRISAKKAMEHP 294
P V + L E + + + + +D LDL++++L DP++RI + A+ H
Sbjct: 255 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 314
Query: 295 YF 296
+F
Sbjct: 315 FF 316
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 187 bits (474), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 118/337 (35%), Positives = 188/337 (55%), Gaps = 55/337 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ +E ++K+G+G YG V+++ ++ TG++VA+KK + T RE+ IL LS
Sbjct: 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS 66
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENI--PVNTVKSLMY 119
++V L++V + N +YLVF+YM+TDL IR+ NI PV+ + ++Y
Sbjct: 67 GHENIVNLLNVLRADNDRD---VYLVFDYMETDLHAVIRA------NILEPVHK-QYVVY 116
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI----- 174
QL K + + H G+LHRD+KP N+L++ + +K+AD GL+R+F + I++ T+ I
Sbjct: 117 QLIKVIKYLHSGGLLHRDMKPSNILLNAECH-VKVADFGLSRSF-VNIRRVTNNIPLSIN 174
Query: 175 -----------------LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGD 217
T WYRAPE+LLGST Y+ +DMWS+ CI E++ +FPG
Sbjct: 175 ENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234
Query: 218 SELQQLLHIFRLLGTP-NEKVWP--------GVSSLMNWHEYPQWNPQSLATAVPNL--- 265
S + QL I ++ P NE V + SL E Q N + + T NL
Sbjct: 235 STMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLK 294
Query: 266 -------DKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
+++ LDLL+++LQ++P+KRISA A++HP+
Sbjct: 295 INPKADCNEEALDLLDKLLQFNPNKRISANDALKHPF 331
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 162/297 (54%), Gaps = 13/297 (4%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ +E L VGEG+YG V + R K TG+IVA+KK +DD+ V +RE+ +L+ L R
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-R 82
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
++V L++V + + + YLVFE++D + + F + V+ ++Q+
Sbjct: 83 HENLVNLLEVCKKKKR-----WYLVFEFVDHTILDDLELFPN---GLDYQVVQKYLFQII 134
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
G+ FCH H I+HRD+KP N+L+ ++ +K+ D G AR P + Y E+ T WYRAP
Sbjct: 135 NGIGFCHSHNIIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAP 193
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT--PNEKVWPG 240
E+L+G Y AVD+W++ C+ E+ LFPGDS++ QL HI LG P +
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFN 253
Query: 241 VSSLMNWHEYPQWNPQS-LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
+ + P+ + L P L + +DL ++ L DP KR + + H +F
Sbjct: 254 KNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFF 310
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 164/303 (54%), Gaps = 14/303 (4%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V D +E +E +G G YG V AR + TG+ VA+KK D TLRE+ IL+
Sbjct: 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFK 111
Query: 62 RDPHVVRLMDVKQGQNKEGR-TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
D +++ + D+ + G +Y+V + M++DL + I S + + + V+ +YQ
Sbjct: 112 HD-NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS----SQPLTLEHVRYFLYQ 166
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKY----THEILT 176
L +G+ + H ++HRDLKP NLL++ + LKI D G+AR ++ T + T
Sbjct: 167 LLRGLKYMHSAQVIHRDLKPSNLLVN-ENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEK 236
WYRAPE++L Y+ A+D+WSV CIF E++ + LFPG + + QL I +LGTP+
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 285
Query: 237 VWPGVSS---LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
V V + P P T P D+ L LL +ML+++PS RISA A+ H
Sbjct: 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345
Query: 294 PYF 296
P+
Sbjct: 346 PFL 348
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 164/303 (54%), Gaps = 14/303 (4%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V D +E +E +G G YG V AR + TG+ VA+KK D TLRE+ IL+
Sbjct: 53 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFK 112
Query: 62 RDPHVVRLMDVKQGQNKEGR-TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
D +++ + D+ + G +Y+V + M++DL + I S + + + V+ +YQ
Sbjct: 113 HD-NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS----SQPLTLEHVRYFLYQ 167
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKY----THEILT 176
L +G+ + H ++HRDLKP NLL++ + LKI D G+AR ++ T + T
Sbjct: 168 LLRGLKYMHSAQVIHRDLKPSNLLVN-ENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEK 236
WYRAPE++L Y+ A+D+WSV CIF E++ + LFPG + + QL I +LGTP+
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 286
Query: 237 VWPGVSS---LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
V V + P P T P D+ L LL +ML+++PS RISA A+ H
Sbjct: 287 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 346
Query: 294 PYF 296
P+
Sbjct: 347 PFL 349
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 181 bits (459), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 160/299 (53%), Gaps = 22/299 (7%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD 71
+GEG YG V A K TG+IVA+KK D TLRE+ IL+ + +++ + +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHE-NIITIFN 76
Query: 72 VKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGH 131
+++ + E +Y++ E M TDL + I + + ++I + +YQ + V HG
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI-----QYFIYQTLRAVKVLHGS 131
Query: 132 GILHRDLKPHNLLMDRKTMTLKIADLGLARAF----------TLPIKKYTHEILTLWYRA 181
++HRDLKP NLL++ LK+ D GLAR T T + T WYRA
Sbjct: 132 NVIHRDLKPSNLLIN-SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRA 190
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PEV+L S YS A+D+WS CI AEL + +FPG QLL IF ++GTP+
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRC 250
Query: 242 SSLMNWHEY----PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
EY P + L P ++ G+DLL++ML +DP+KRI+AK+A+EHPY
Sbjct: 251 IESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 180 bits (457), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 160/299 (53%), Gaps = 22/299 (7%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD 71
+GEG YG V A K TG+IVA+KK D TLRE+ IL+ + +++ + +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHE-NIITIFN 76
Query: 72 VKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGH 131
+++ + E +Y++ E M TDL + I + + ++I + +YQ + V HG
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI-----QYFIYQTLRAVKVLHGS 131
Query: 132 GILHRDLKPHNLLMDRKTMTLKIADLGLARAF----------TLPIKKYTHEILTLWYRA 181
++HRDLKP NLL++ LK+ D GLAR T T + T WYRA
Sbjct: 132 NVIHRDLKPSNLLIN-SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRA 190
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PEV+L S YS A+D+WS CI AEL + +FPG QLL IF ++GTP+
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRC 250
Query: 242 SSLMNWHEY----PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
EY P + L P ++ G+DLL++ML +DP+KRI+AK+A+EHPY
Sbjct: 251 IESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 172/297 (57%), Gaps = 11/297 (3%)
Query: 5 AFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
A+ + +G G++G V++A+ + + VA+KK + + RE+ I+R++ + P
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKN------RELQIMRIV-KHP 92
Query: 65 HVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
+VV L +K+ L LV EY+ + + R + + + +P+ +K MYQL +
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+A+ H GI HRD+KP NLL+D + LK+ D G A+ + + I + +YRAPE
Sbjct: 153 SLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL-IAGEPNVSXICSRYYRAPE 211
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS 243
++ G+T+Y+T +D+WS C+ AEL+ LFPG+S + QL+ I ++LGTP+ + ++
Sbjct: 212 LIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP 271
Query: 244 LMNWHEYPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
H++PQ P + P D +DL+ ++L+Y PS R++A +A+ HP+FD+L
Sbjct: 272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 162/298 (54%), Gaps = 22/298 (7%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD 71
+GEG YG V A K TG+IVA+KK D TLRE+ IL+ + +++ + +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHE-NIITIFN 76
Query: 72 VKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGH 131
+++ + E +Y++ E M TDL + I + + ++I + +YQ + V HG
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI-----QYFIYQTLRAVKVLHGS 131
Query: 132 GILHRDLKPHNLLMDRKTMTLKIADLGLARAF-------TLPIKKYT---HEILTLWYRA 181
++HRDLKP NLL++ LK+ D GLAR + P + + + T WYRA
Sbjct: 132 NVIHRDLKPSNLLIN-SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRA 190
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PEV+L S YS A+D+WS CI AEL + +FPG QLL IF ++GTP+
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRC 250
Query: 242 SSLMNWHEY----PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
EY P + L P ++ G+DLL++ML +DP+KRI+AK+A+EHPY
Sbjct: 251 IESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 177 bits (448), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 168/300 (56%), Gaps = 18/300 (6%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ +L+ +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEH-QTYCQRTLREIQIL-LRFRHEN 102
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
V+ + D+ + E +Y+V + M+TDL K ++S + + ++I +YQ+ +G+
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY-----FLYQILRGL 157
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 158 KYIHSANVLHRDLKPSNLLIN-TTCDLKICDFGLAR-IADPEHDHTGFLTEXVATRWYRA 215
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 242 SSLMNWHEYPQWNPQSLATA----VPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+ M Y Q P A P D LDLL++ML ++P+KRI+ ++A+ HPY +
Sbjct: 276 IN-MKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLE 334
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 173 bits (439), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LRFRHEN 82
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 137
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 138 KYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRA 195
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 173 bits (439), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LRFRHEN 84
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 139
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 140 KYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRA 197
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 257
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 316
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 173 bits (439), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LRFRHEN 90
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 145
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 146 KYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRA 203
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 204 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 263
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 264 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 322
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 173 bits (439), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LRFRHEN 82
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 137
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 138 KYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRA 195
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 162/298 (54%), Gaps = 16/298 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LAFRHEN 84
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 139
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 140 KYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRA 197
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 257
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LRFRHEN 102
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 157
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 158 KYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRA 215
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 276 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 334
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LRFRHEN 82
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 137
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 138 KYIHSANVLHRDLKPSNLLLN-TTXDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRA 195
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXI 255
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LRFRHEN 82
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 137
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 138 KYIHSANVLHRDLKPSNLLLN-TTXDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRA 195
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 174/347 (50%), Gaps = 61/347 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD 71
+G G+YG VY A +K T K VA+KK +D LRE++IL L D +++RL D
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD-YIIRLYD 92
Query: 72 VKQGQNKEGRTVLYLVFEYMDTDLKKYIRS-FRQTGENIPVNTVKSLMYQLCKGVAFCHG 130
+ + LY+V E D+DLKK ++ T E+I K+++Y L G F H
Sbjct: 93 LIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHI-----KTILYNLLLGENFIHE 147
Query: 131 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP----------------------IK 168
GI+HRDLKP N L+++ ++K+ D GLAR K
Sbjct: 148 SGIIHRDLKPANCLLNQDC-SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKK 206
Query: 169 KYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELV-----------TKTALFPGD 217
+ T ++T WYRAPE++L +Y+ ++D+WS CIFAEL+ + LFPG
Sbjct: 207 QLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGS 266
Query: 218 SEL-----------------QQLLHIFRLLGTPNEKVWPGVSS---LMNWHEYPQWNPQS 257
S QL IF ++GTP E ++ + +P P +
Sbjct: 267 SCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPIN 326
Query: 258 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKTRL 304
L P++ DG++LLE ML+++P+KRI+ +A++HPY D+ K +L
Sbjct: 327 LKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKL 373
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LRFRHEN 86
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 141
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 142 KYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLXEXVATRWYRA 199
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LRFRHEN 87
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 142
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 143 KYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLXEXVATRWYRA 200
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 260
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 261 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 319
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LRFRHEN 82
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 137
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 138 KYIHSANVLHRDLKPSNLLLN-TTXDLKIXDFGLARVAD-PDHDHTGFLTEYVATRWYRA 195
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXI 255
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 172 bits (437), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYXQRTLREIKIL-LRFRHEN 86
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 141
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 142 KYIHSANVLHRDLKPSNLLLN-TTXDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRA 199
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LRFRHEN 87
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 142
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 143 KYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRA 200
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 260
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 261 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 319
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LRFRHEN 88
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 143
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 144 KYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRA 201
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 202 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 261
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 262 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 320
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LRFRHEN 79
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 134
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 135 KYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRA 192
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 193 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 252
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 253 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 311
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LRFRHEN 86
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 141
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 142 KYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRA 199
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LRFRHEN 80
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 135
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 136 KYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRA 193
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 253
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 254 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 312
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LRFRHEN 86
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 141
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 142 KYIHSANVLHRDLKPSNLLLN-TTXDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRA 199
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 162/299 (54%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LRFRHEN 86
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K ++ + ++I +YQ+ +G+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICY-----FLYQILRGL 141
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 142 KYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRA 199
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 162/299 (54%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LRFRHEN 80
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 135
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 136 KYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRA 193
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P ++ +
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCI 253
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 254 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 312
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA++K E + TLRE+ IL + R +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEH-QTYCQRTLREIKIL-LRFRHEN 86
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 141
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 142 KYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRA 199
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 171 bits (434), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 172/325 (52%), Gaps = 48/325 (14%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD 71
+G G++G V + +GK ALKK L + P RE+ I+++L ++++L+D
Sbjct: 15 LGTGSFGIVCEVFDIESGKRFALKKV-LQD-----PRYKNRELDIMKVLDHV-NIIKLVD 67
Query: 72 V------------------------KQGQNKEGRTV---------LYLVFEYMDTDLKKY 98
G N ++V L ++ EY+ L K
Sbjct: 68 YFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKV 127
Query: 99 IRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLG 158
++SF ++G +IP+N + +YQL + V F H GI HRD+KP NLL++ K TLK+ D G
Sbjct: 128 LKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFG 187
Query: 159 LARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 218
A+ +P + I + +YRAPE++LG+T Y+ ++D+WS+ C+F EL+ LF G++
Sbjct: 188 SAKKL-IPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGET 246
Query: 219 ELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS----LATAVPNLDKDGLDLLE 274
+ QL+ I +++GTP ++ ++ +P + L P+L +DLLE
Sbjct: 247 SIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSL---AIDLLE 303
Query: 275 QMLQYDPSKRISAKKAMEHPYFDDL 299
Q+L+Y+P RI+ +AM HP+FD L
Sbjct: 304 QILRYEPDLRINPYEAMAHPFFDHL 328
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 171 bits (434), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 167/304 (54%), Gaps = 28/304 (9%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LAFRHEN 84
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 139
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 140 KYIHSANVLHRDLKPSNLLLN-TTSDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRA 197
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN-EKVWPG 240
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+ E + G
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCG 257
Query: 241 VS--------SLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME 292
++ SL + ++ P WN PN D LDLL++ML ++P KRI ++A+
Sbjct: 258 INLKARNYLLSLPHKNKVP-WN-----RLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 311
Query: 293 HPYF 296
HPY
Sbjct: 312 HPYL 315
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 171 bits (432), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 160/299 (53%), Gaps = 16/299 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L +GEG YG V A + VA+KK E + TLRE+ IL + R +
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKIL-LRFRHEN 102
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++ + D+ + E +YLV M DL K +++ + ++I +YQ+ +G+
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICY-----FLYQILRGL 157
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRA 181
+ H +LHRDLKP NLL++ T LKI D GLAR P +T + T WYRA
Sbjct: 158 KYIHSANVLHRDLKPSNLLLN-TTXDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRA 215
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE++L S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ +
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 242 SSLMNWH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+L + P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 276 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 334
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 161/291 (55%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHC-NIVRLRY 80
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 81 FFYSSGEKKD-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ ++ I + +YRAPE++ G+T
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGAT 198
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 258
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 259 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 161/291 (55%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHC-NIVRLRY 80
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 81 FFYSSGEKKD-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ ++ I + +YRAPE++ G+T
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGAT 198
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 258
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 259 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 161/291 (55%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHC-NIVRLRY 108
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 109 FFYSSGEKKD-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ ++ I + +YRAPE++ G+T
Sbjct: 168 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGAT 226
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +
Sbjct: 227 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 286
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 287 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 337
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 163/305 (53%), Gaps = 14/305 (4%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + L+ VG G YG V A + TG VA+KK E RE+ +L+ +
Sbjct: 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM- 81
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
R +V+ L+DV + + T YLV +M TDL K ++ E + + ++ L+YQ
Sbjct: 82 RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH-----EKLGEDRIQFLVYQ 136
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ KG+ + H GI+HRDLKP NL ++ + LKI D GLAR + ++T WYR
Sbjct: 137 MLKGLRYIHAAGIIHRDLKPGNLAVN-EDCELKILDFGLARQAD---SEMXGXVVTRWYR 192
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APEV+L Y+ VD+WSV CI AE++T LF G L QL I ++ GTP +
Sbjct: 193 APEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 252
Query: 241 VSS--LMNWHE-YPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+ S N+ + P+ + A+ + N ++LLE+ML D +R++A +A+ HPYF+
Sbjct: 253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312
Query: 298 DLDKT 302
L T
Sbjct: 313 SLHDT 317
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 161/291 (55%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHC-NIVRLRY 93
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 94 FFYSSGEKKD-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ ++ I + +YRAPE++ G+T
Sbjct: 153 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGAT 211
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +
Sbjct: 212 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 271
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 272 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 322
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 161/291 (55%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHC-NIVRLRY 85
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 86 FFYSSGEKKD-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ ++ I + +YRAPE++ G+T
Sbjct: 145 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGAT 203
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +
Sbjct: 204 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 263
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 264 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 314
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 161/291 (55%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHC-NIVRLRY 116
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 117 FFYSSGEKKD-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 175
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ ++ I + +YRAPE++ G+T
Sbjct: 176 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGAT 234
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +
Sbjct: 235 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 294
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 295 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 345
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 161/291 (55%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHC-NIVRLRY 114
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 115 FFYSSGEKKD-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ ++ I + +YRAPE++ G+T
Sbjct: 174 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGAT 232
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +
Sbjct: 233 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 292
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 293 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 343
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 160/291 (54%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHC-NIVRLRY 92
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 93 FFYSSGEKKD-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T
Sbjct: 152 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGAT 210
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +
Sbjct: 211 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 270
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 271 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 321
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 160/291 (54%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHC-NIVRLRY 80
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 81 FFYSSGEKKD-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGAT 198
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 258
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 259 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 161/291 (55%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHC-NIVRLRY 159
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 160 FFYSSGEKKD-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ ++ I + +YRAPE++ G+T
Sbjct: 219 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGAT 277
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +
Sbjct: 278 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 337
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 338 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 388
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 160/291 (54%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHC-NIVRLRY 80
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 81 FFYSSGEKKD-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGAT 198
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 258
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 259 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 161/291 (55%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHC-NIVRLRY 118
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 119 FFYSSGEKKD-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ ++ I + +YRAPE++ G+T
Sbjct: 178 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGAT 236
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +
Sbjct: 237 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 296
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 297 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 347
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 159/291 (54%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHC-NIVRLRY 80
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 81 FFYSSGEKKD-EVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGAT 198
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFA 258
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 259 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 160/291 (54%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHC-NIVRLRY 81
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 82 FFYSSGEKKD-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 140
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T
Sbjct: 141 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGAT 199
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +
Sbjct: 200 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 259
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 260 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 310
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 160/291 (54%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHC-NIVRLRY 80
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 81 FFYSSGEKKD-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ ++ I + +YRAPE++ G+T
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGAT 198
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFA 258
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 259 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 160/291 (54%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHC-NIVRLRY 84
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 85 FFYSSGEKKD-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T
Sbjct: 144 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGAT 202
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +
Sbjct: 203 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 262
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 263 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 313
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 167 bits (424), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 160/291 (54%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHC-NIVRLRY 99
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 100 FFYSSGEKKD-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T
Sbjct: 159 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGAT 217
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +
Sbjct: 218 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 277
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 278 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 328
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 167 bits (424), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 160/291 (54%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHC-NIVRLRY 88
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 89 FFYSSGEKKD-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T
Sbjct: 148 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGAT 206
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +
Sbjct: 207 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 266
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 267 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 317
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 167 bits (424), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 160/291 (54%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHC-NIVRLRY 92
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 93 FFYSSGEKKD-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T
Sbjct: 152 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGAT 210
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +
Sbjct: 211 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 270
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 271 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 321
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 167 bits (424), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 160/291 (54%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHC-NIVRLRY 114
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 115 FFYSSGEKKD-EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T
Sbjct: 174 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGAT 232
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +
Sbjct: 233 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 292
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 293 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 343
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 167 bits (422), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 160/291 (54%), Gaps = 12/291 (4%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL-- 69
+G G++G VY+A+ +G++VA+KK + + RE+ I+R L ++VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHC-NIVRLRY 80
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H
Sbjct: 81 FFYSSGEKKD-VVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
GI HRD+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGAT 198
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y++++D+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 258
Query: 250 YPQWNPQSLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+PQ P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 259 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 167 bits (422), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 161/302 (53%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L + HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 75
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 76 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDH-----VQFLIYQ 129
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 185
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 245
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 246 ISSESARNYIQSLAQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 302
Query: 295 YF 296
YF
Sbjct: 303 YF 304
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 161/302 (53%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++S + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ + LKI D GL R + Y + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDS-ELKILDFGLCRHTDDEMTGY---VATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLAQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 161/302 (53%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 26 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 85
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 86 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 139
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ + LKI D GLAR + Y + T WYR
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDS-ELKILDFGLARHTDDEMTGY---VATRWYR 195
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 255
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 256 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 312
Query: 295 YF 296
YF
Sbjct: 313 YF 314
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 75
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 76 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 129
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 185
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 245
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 246 ISSESARNYIQSLAQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 302
Query: 295 YF 296
YF
Sbjct: 303 YF 304
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 161/302 (53%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 22 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 81
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 82 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 135
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ + LKI D GLAR + Y + T WYR
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDS-ELKILDFGLARHTDDEMTGY---VATRWYR 191
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 251
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 252 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 308
Query: 295 YF 296
YF
Sbjct: 309 YF 310
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 86
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 87 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 140
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTADEMTGY---VATRWYR 196
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 257 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313
Query: 295 YF 296
YF
Sbjct: 314 YF 315
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 86
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 87 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 140
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTADEMTGY---VATRWYR 196
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 257 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313
Query: 295 YF 296
YF
Sbjct: 314 YF 315
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 26 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 85
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 86 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 139
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 195
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 255
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 256 ISSESARNYIQSLAQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 312
Query: 295 YF 296
YF
Sbjct: 313 YF 314
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 40 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 99
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 100 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 153
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 209
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 269
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 270 ISSESARNYIQSLAQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 326
Query: 295 YF 296
YF
Sbjct: 327 YF 328
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 30 VPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 89
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 90 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 143
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 144 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 199
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 200 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 259
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 260 ISSESARNYIQSLAQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 316
Query: 295 YF 296
YF
Sbjct: 317 YF 318
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 86
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 87 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 140
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTADEMTGY---VATRWYR 196
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 257 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313
Query: 295 YF 296
YF
Sbjct: 314 YF 315
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 39 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 98
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 99 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 152
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 208
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 268
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 269 ISSESARNYIQSLAQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 325
Query: 295 YF 296
YF
Sbjct: 326 YF 327
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 175/359 (48%), Gaps = 62/359 (17%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V D +E +G G+YG VY A +K K VA+KK +D LRE++IL L
Sbjct: 26 VPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLK 85
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
D +++RL D+ ++ LY+V E D+DLKK ++ E VK+++Y L
Sbjct: 86 SD-YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQ----HVKTILYNL 140
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT----LPI---------- 167
G F H GI+HRDLKP N L+++ ++KI D GLAR + I
Sbjct: 141 LLGEKFIHESGIIHRDLKPANCLLNQDC-SVKICDFGLARTINSDKDIHIVNDLEEKEEN 199
Query: 168 -----------KKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELV-------- 208
K+ T ++T WYRAPE++L +Y+ ++D+WS CIFAEL+
Sbjct: 200 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHIN 259
Query: 209 ---TKTALFPGDSEL-----------------QQLLHIFRLLGTPNEKVWPGVSS---LM 245
+ LFPG S QL IF ++GTP E+ ++ +
Sbjct: 260 NPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIK 319
Query: 246 NWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKTRL 304
+P + L+ ++ K+G+DLLE ML+++ KRI+ KA+ HPY D+ K L
Sbjct: 320 YIKLFPTRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKENL 378
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 167/312 (53%), Gaps = 27/312 (8%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS- 61
MD F+ G+GT+G V +EK+TG VA+KK + +D P RE+ I++ L+
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKK--VIQD----PRFRNRELQIMQDLAV 75
Query: 62 -RDPHVVRLMDVKQGQNKEGRTVLYL--VFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
P++V+L + R +YL V EY+ L + R++ + P +K +
Sbjct: 76 LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFL 135
Query: 119 YQLCKGVAFCH--GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT 176
+QL + + H + HRD+KPHN+L++ TLK+ D G A+ + P + I +
Sbjct: 136 FQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS-PSEPNVAYICS 194
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEK 236
+YRAPE++ G+ HY+TAVD+WSV CIFAE++ +F GD+ QL I R+LG P+ +
Sbjct: 195 RYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSRE 254
Query: 237 VWPGVS------SLMNWHEYPQWN---PQSLATAVPNLDKDGLDLLEQMLQYDPSKRISA 287
V ++ L N P N SL A K+ DLL +LQY P +R+
Sbjct: 255 VLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDA-----KEAYDLLSALLQYLPEERMKP 309
Query: 288 KKAMEHPYFDDL 299
+A+ HPYFD+L
Sbjct: 310 YEALCHPYFDEL 321
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 86
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 87 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 140
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 196
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 257 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313
Query: 295 YF 296
YF
Sbjct: 314 YF 315
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 25 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 84
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 85 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 138
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 194
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 254
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 255 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 311
Query: 295 YF 296
YF
Sbjct: 312 YF 313
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 25 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 84
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 85 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 138
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 194
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 254
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 255 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 311
Query: 295 YF 296
YF
Sbjct: 312 YF 313
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 19 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 78
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 79 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 132
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 133 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 188
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 189 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 248
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 249 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 305
Query: 295 YF 296
YF
Sbjct: 306 YF 307
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 22 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 81
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 82 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 135
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 191
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 251
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 252 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 308
Query: 295 YF 296
YF
Sbjct: 309 YF 310
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 22 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 81
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 82 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 135
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 191
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 251
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 252 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 308
Query: 295 YF 296
YF
Sbjct: 309 YF 310
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + T + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTD---DEMTGXVATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 40 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 99
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 100 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 153
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 209
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 269
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 270 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 326
Query: 295 YF 296
YF
Sbjct: 327 YF 328
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 18 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 77
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 78 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 131
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 132 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 187
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 247
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 248 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 304
Query: 295 YF 296
YF
Sbjct: 305 YF 306
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 161/302 (53%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 25 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 84
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 85 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 138
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ + LKI D GLAR + Y + T WYR
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVN-EDXELKILDFGLARHTDDEMTGY---VATRWYR 194
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 254
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 255 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 311
Query: 295 YF 296
YF
Sbjct: 312 YF 313
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 43 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 102
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 103 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 156
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 212
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 272
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 273 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 329
Query: 295 YF 296
YF
Sbjct: 330 YF 331
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 156/299 (52%), Gaps = 14/299 (4%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V + + +G +A+KK T RE+ +L+ +
Sbjct: 49 VPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMK 108
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV + E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 109 HE-NVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 162
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 163 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 218
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV--- 237
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL GTP V
Sbjct: 219 APEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISR 278
Query: 238 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P + + PQ ++ A + +DLLE+ML D KRI+A +A+ HPYF
Sbjct: 279 MPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYF 337
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 43 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 102
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 103 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 156
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMXGY---VATRWYR 212
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 272
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 273 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 329
Query: 295 YF 296
YF
Sbjct: 330 YF 331
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 17 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 76
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 77 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 130
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 186
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 187 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 246
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 247 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 303
Query: 295 YF 296
YF
Sbjct: 304 YF 305
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 32 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 91
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 92 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 145
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 201
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 261
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 262 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 318
Query: 295 YF 296
YF
Sbjct: 319 YF 320
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 17 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 76
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 77 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 130
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 186
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 187 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 246
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 247 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 303
Query: 295 YF 296
YF
Sbjct: 304 YF 305
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 32 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 91
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 92 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 145
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 201
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 261
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 262 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 318
Query: 295 YF 296
YF
Sbjct: 319 YF 320
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 26 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 85
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 86 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 139
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 195
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 255
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 256 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 312
Query: 295 YF 296
YF
Sbjct: 313 YF 314
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 161/302 (53%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ + LKI D GLAR + Y + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVN-EDXELKILDFGLARHTDDEMTGY---VATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 22 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 81
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 82 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 135
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 191
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 251
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 252 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 308
Query: 295 YF 296
YF
Sbjct: 309 YF 310
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 26 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 85
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 86 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 139
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 195
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 255
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 256 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 312
Query: 295 YF 296
YF
Sbjct: 313 YF 314
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 161/302 (53%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 31 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 90
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 91 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 144
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ + LKI D GLAR + Y + T WYR
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVN-EDXELKILDFGLARHTDDEMTGY---VATRWYR 200
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 201 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 260
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 261 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 317
Query: 295 YF 296
YF
Sbjct: 318 YF 319
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 31 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 90
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 91 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 144
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 200
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 201 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 260
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 261 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 317
Query: 295 YF 296
YF
Sbjct: 318 YF 319
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 32 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMK 91
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 92 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 145
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 201
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 261
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 262 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 318
Query: 295 YF 296
YF
Sbjct: 319 YF 320
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 75
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 76 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 129
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 185
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 245
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 246 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 302
Query: 295 YF 296
YF
Sbjct: 303 YF 304
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 75
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 76 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 129
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + + + T WYR
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMAGF---VATRWYR 185
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 245
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 246 ISSESARNYIQSLAQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 302
Query: 295 YF 296
YF
Sbjct: 303 YF 304
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 39 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 98
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 99 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 152
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYR 208
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 268
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 269 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 325
Query: 295 YF 296
YF
Sbjct: 326 YF 327
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 164 bits (415), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + + + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMAGF---VATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLAQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 164 bits (415), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 161/302 (53%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L +G G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 25 VPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 84
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 85 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 138
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ + LKI D GLAR + Y + T WYR
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVN-EDXELKILDFGLARHTDDEMTGY---VATRWYR 194
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 254
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 255 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 311
Query: 295 YF 296
YF
Sbjct: 312 YF 313
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 164 bits (415), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + + + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTDDEMAGF---VATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 164 bits (415), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDAGLARHTDDEMTGY---VATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 164 bits (414), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDYGLARHTDDEMTGY---VATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 164 bits (414), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 150/290 (51%), Gaps = 15/290 (5%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD 71
VG G YG V A +K +G+ VA+KK E RE+ +L+ + + +V+ L+D
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE-NVIGLLD 108
Query: 72 V-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 130
V + YLV +M TDL+K + G ++ L+YQ+ KG+ + H
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIM------GMEFSEEKIQYLVYQMLKGLKYIHS 162
Query: 131 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTH 190
G++HRDLKP NL ++ LKI D GLAR + Y ++T WYRAPEV+L H
Sbjct: 163 AGVVHRDLKPGNLAVNEDC-ELKILDFGLARHADAEMTGY---VVTRWYRAPEVILSWMH 218
Query: 191 YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV---SSLMNW 247
Y+ VD+WSV CI AE++T LF G L QL I ++ G P + + ++
Sbjct: 219 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI 278
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
PQ + P DLLE+ML+ D KR++A +A+ HP+F+
Sbjct: 279 QSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 163 bits (413), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDRGLARHTDDEMTGY---VATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 150/290 (51%), Gaps = 15/290 (5%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD 71
VG G YG V A +K +G+ VA+KK E RE+ +L+ + + +V+ L+D
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE-NVIGLLD 90
Query: 72 V-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 130
V + YLV +M TDL+K + G ++ L+YQ+ KG+ + H
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIM------GLKFSEEKIQYLVYQMLKGLKYIHS 144
Query: 131 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTH 190
G++HRDLKP NL ++ LKI D GLAR + Y ++T WYRAPEV+L H
Sbjct: 145 AGVVHRDLKPGNLAVNEDC-ELKILDFGLARHADAEMTGY---VVTRWYRAPEVILSWMH 200
Query: 191 YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV---SSLMNW 247
Y+ VD+WSV CI AE++T LF G L QL I ++ G P + + ++
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI 260
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
PQ + P DLLE+ML+ D KR++A +A+ HP+F+
Sbjct: 261 QSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 159/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 40 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 99
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 100 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 153
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + + T WYR
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTD---DEMXGXVATRWYR 209
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 269
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 270 ISSESARNYIQSLAQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 326
Query: 295 YF 296
YF
Sbjct: 327 YF 328
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D GLAR + Y + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDGGLARHTDDEMTGY---VATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/364 (31%), Positives = 179/364 (49%), Gaps = 77/364 (21%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKT-RLHEDDEGVPPTTLREVSILRML 60
+ D +E +G G+YG V A +K ++VA+KK R+ ED LRE++IL L
Sbjct: 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCK-RILREIAILNRL 109
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNT----VKS 116
+ D HVV+++D+ ++ E LY+V E D+D KK R+ PV +K+
Sbjct: 110 NHD-HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRT--------PVYLTELHIKT 160
Query: 117 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--------TLPI- 167
L+Y L GV + H GILHRDLKP N L++ + ++K+ D GLAR LPI
Sbjct: 161 LLYNLLVGVKYVHSAGILHRDLKPANCLVN-QDCSVKVCDFGLARTVDYPENGNSQLPIS 219
Query: 168 ------------------KKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
++ T ++T WYRAPE++L +Y+ A+D+WS+ CIFAEL+
Sbjct: 220 PREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
Query: 210 -----------KTALFPGDS--------------------ELQQLLHIFRLLGTPNEKVW 238
+ LFPG S QL IF +LGTP+E+
Sbjct: 280 MIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDI 339
Query: 239 PGVS---SLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
+ + +P+ LA P D + LL++ML ++P+KRI+ + + HP+
Sbjct: 340 EALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPF 399
Query: 296 FDDL 299
F ++
Sbjct: 400 FKEV 403
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/328 (35%), Positives = 174/328 (53%), Gaps = 41/328 (12%)
Query: 2 VMDAFE-KLEKVGEGTYGKVYRAREKATGKIV--ALKKTRLHEDDEGVPPTTLREVSILR 58
V D FE + KVG GTYG VY+A+ K ALK+ + G+ + RE+++LR
Sbjct: 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTGISMSACREIALLR 73
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGEN-----IPVNT 113
L + P+V+ L V ++L+F+Y + DL I+ R + N +P
Sbjct: 74 EL-KHPNVISLQKVFLSHADRK---VWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGM 129
Query: 114 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM---DRKTMTLKIADLGLARAFTLPIKKY 170
VKSL+YQ+ G+ + H + +LHRDLKP N+L+ + +KIAD+G AR F P+K
Sbjct: 130 VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL 189
Query: 171 TH---EILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE-------- 219
++T WYRAPE+LLG+ HY+ A+D+W++ CIFAEL+T +F E
Sbjct: 190 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPY 249
Query: 220 -LQQLLHIFRLLGTPNEKVW------PGVSSLMNWHEYPQWNPQSLATAVP----NLDKD 268
QL IF ++G P +K W P S+LM + SL + D
Sbjct: 250 HHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSK 309
Query: 269 GLDLLEQMLQYDPSKRISAKKAMEHPYF 296
LL+++L DP KRI++++AM+ PYF
Sbjct: 310 AFHLLQKLLTMDPIKRITSEQAMQDPYF 337
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 159/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI GLAR + Y + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILGFGLARHTDDEMTGY---VATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 159/302 (52%), Gaps = 20/302 (6%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + ++ L VG G YG V A + TG VA+KK T RE+ +L+ +
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 62 RDPHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +V+ L+DV ++ E +YLV M DL ++ + T ++ V+ L+YQ
Sbjct: 80 HE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G+ + H I+HRDLKP NL ++ LKI D LAR + Y + T WYR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFYLARHTDDEMTGY---VATRWYR 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE++L HY+ VD+WSV CI AEL+T LFPG + QL I RL+GTP ++
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 249
Query: 241 VSS------LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
+SS + + + P+ N A + +DLLE+ML D KRI+A +A+ H
Sbjct: 250 ISSESARNYIQSLTQMPKMN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 295 YF 296
YF
Sbjct: 307 YF 308
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 157 bits (397), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 158/296 (53%), Gaps = 16/296 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L VG G YG V A + + VA+KK T RE+ +L+ L + +
Sbjct: 30 LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE-N 88
Query: 66 VVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+ L+DV + E + +YLV M DL ++S + E+ V+ L+YQL +G
Sbjct: 89 VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEH-----VQFLVYQLLRG 143
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
+ + H GI+HRDLKP N+ ++ + L+I D GLAR + Y + T WYRAPE+
Sbjct: 144 LKYIHSAGIIHRDLKPSNVAVNEDS-ELRILDFGLARQADEEMTGY---VATRWYRAPEI 199
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSL 244
+L HY+ VD+WSV CI AEL+ ALFPG + QL I ++GTP+ +V +SS
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISS- 258
Query: 245 MNWHEYPQWNP----QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
+ Y Q P + L++ + +DLL +ML D +R+SA +A+ H YF
Sbjct: 259 EHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 157/296 (53%), Gaps = 16/296 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L VG G YG V A + + VA+KK T RE+ +L+ L + +
Sbjct: 30 LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE-N 88
Query: 66 VVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+ L+DV + E + +YLV M DL ++ + E+ V+ L+YQL +G
Sbjct: 89 VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEH-----VQFLVYQLLRG 143
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
+ + H GI+HRDLKP N+ ++ + L+I D GLAR + Y + T WYRAPE+
Sbjct: 144 LKYIHSAGIIHRDLKPSNVAVNEDS-ELRILDFGLARQADEEMTGY---VATRWYRAPEI 199
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSL 244
+L HY+ VD+WSV CI AEL+ ALFPG + QL I ++GTP+ +V +SS
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISS- 258
Query: 245 MNWHEYPQWNP----QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
+ Y Q P + L++ + +DLL +ML D +R+SA +A+ H YF
Sbjct: 259 EHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 157/296 (53%), Gaps = 16/296 (5%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L VG G YG V A + + VA+KK T RE+ +L+ L + +
Sbjct: 22 LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE-N 80
Query: 66 VVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+ L+DV + E + +YLV M DL ++ + E+ V+ L+YQL +G
Sbjct: 81 VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEH-----VQFLVYQLLRG 135
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
+ + H GI+HRDLKP N+ ++ + L+I D GLAR + Y + T WYRAPE+
Sbjct: 136 LKYIHSAGIIHRDLKPSNVAVN-EDCELRILDFGLARQADEEMTGY---VATRWYRAPEI 191
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSL 244
+L HY+ VD+WSV CI AEL+ ALFPG + QL I ++GTP+ +V +SS
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISS- 250
Query: 245 MNWHEYPQWNP----QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
+ Y Q P + L++ + +DLL +ML D +R+SA +A+ H YF
Sbjct: 251 EHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 306
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 154 bits (388), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 164/311 (52%), Gaps = 34/311 (10%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ L+ +G G G V+ A + K VA+KK L D + V LRE+ I+R L D +
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVL-TDPQSVK-HALREIKIIRRLDHD-N 69
Query: 66 VVRLMDV-----KQGQNKEGR----TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKS 116
+V++ ++ Q + G +Y+V EYM+TDL + E+ +
Sbjct: 70 IVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEH-----ARL 124
Query: 117 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--- 173
MYQL +G+ + H +LHRDLKP NL ++ + + LKI D GLAR Y+H+
Sbjct: 125 FMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD---PHYSHKGHL 181
Query: 174 ---ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLL 230
++T WYR+P +LL +Y+ A+DMW+ CIFAE++T LF G EL+Q+ I +
Sbjct: 182 SEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESI 241
Query: 231 GTPNEKVWPGVSSLM-----NWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRI 285
+E+ + S++ N P + L +P + ++ +D LEQ+L + P R+
Sbjct: 242 PVVHEEDRQELLSVIPVYIRNDMTEPH---KPLTQLLPGISREAVDFLEQILTFSPMDRL 298
Query: 286 SAKKAMEHPYF 296
+A++A+ HPY
Sbjct: 299 TAEEALSHPYM 309
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 162/309 (52%), Gaps = 37/309 (11%)
Query: 4 DAFEKLEKVGEGTYGKVYRA-----REKATGKIVA-LKKTRLHEDDEGVPPTTLREVSIL 57
D ++ + K+G G Y +V+ A EK KI+ +KK ++ RE+ IL
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIK-----------REIKIL 85
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
L P+++ L D+ + + RT LVFE+++ F+Q + + ++
Sbjct: 86 ENLRGGPNIITLADIVK--DPVSRTPA-LVFEHVNNT------DFKQLYQTLTDYDIRFY 136
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 177
MY++ K + +CH GI+HRD+KPHN+++D + L++ D GLA F P ++Y + +
Sbjct: 137 MYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASR 195
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTP--- 233
+++ PE+L+ Y ++DMWS+ C+ A ++ K F G QL+ I ++LGT
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 234 ------NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISA 287
N ++ P + ++ H +W + + + LD L+++L+YD R++A
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 288 KKAMEHPYF 296
++AMEHPYF
Sbjct: 316 REAMEHPYF 324
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 25/311 (8%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +YLV E MD +L + I+ + + L+YQ
Sbjct: 82 HK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM------ELDHERMSYLLYQ 134
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 135 MLXGIKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDFGLARTAGTSFM-MTPYVVTRYYR 192
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E+V LFPG + Q + LGTP +K
Sbjct: 193 APEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 237 VWPGVSSLMNWH------EYPQWNPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRIS 286
+ P V + + +P+ P SL A +K DLL +ML DP+KRIS
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 287 AKKAMEHPYFD 297
A++HPY +
Sbjct: 312 VDDALQHPYIN 322
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 25/311 (8%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +YLV E MD +L + I+ + + L+YQ
Sbjct: 82 HK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM------ELDHERMSYLLYQ 134
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 135 MLXGIKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDFGLARTAGTSFM-MTPYVVTRYYR 192
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E+V LFPG + Q + LGTP +K
Sbjct: 193 APEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 237 VWPGVSSLMNWH------EYPQWNPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRIS 286
+ P V + + +P+ P SL A +K DLL +ML DP+KRIS
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 287 AKKAMEHPYFD 297
A++HPY +
Sbjct: 312 VDDALQHPYIN 322
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 140 bits (353), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 25/311 (8%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 74
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +YLV E MD +L + I+ + + L+YQ
Sbjct: 75 HK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM------ELDHERMSYLLYQ 127
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 128 MLXGIKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDFGLARTAGTSFM-MTPYVVTRYYR 185
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E+V LFPG + Q + LGTP +K
Sbjct: 186 APEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244
Query: 237 VWPGVSSLMNWH------EYPQWNPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRIS 286
+ P V + + +P+ P SL A +K DLL +ML DP+KRIS
Sbjct: 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 304
Query: 287 AKKAMEHPYFD 297
A++HPY +
Sbjct: 305 VDDALQHPYIN 315
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 25/311 (8%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +YLV E MD +L + I+ + + L+YQ
Sbjct: 82 HK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM------ELDHERMSYLLYQ 134
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDFGLARTAGTSFM-MTPYVVTRYYR 192
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E+V LFPG + Q + LGTP +K
Sbjct: 193 APEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 237 VWPGVSSLMNWH------EYPQWNPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRIS 286
+ P V + + +P+ P SL A +K DLL +ML DP+KRIS
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 287 AKKAMEHPYFD 297
A++HPY +
Sbjct: 312 VDDALQHPYIN 322
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 25/311 (8%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 119
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +YLV E MD +L + I+ + + L+YQ
Sbjct: 120 HK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM------ELDHERMSYLLYQ 172
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 173 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYR 230
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E+V LFPG + Q + LGTP +K
Sbjct: 231 APEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289
Query: 237 VWPGVSSLMNWH------EYPQWNPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRIS 286
+ P V + + +P+ P SL A +K DLL +ML DP+KRIS
Sbjct: 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 349
Query: 287 AKKAMEHPYFD 297
A++HPY +
Sbjct: 350 VDDALQHPYIN 360
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 25/311 (8%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 21 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 80
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +YLV E MD +L + I+ + + L+YQ
Sbjct: 81 HK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM------ELDHERMSYLLYQ 133
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 134 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYR 191
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E+V LFPG + Q + LGTP +K
Sbjct: 192 APEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 250
Query: 237 VWPGVSSLMNWH------EYPQWNPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRIS 286
+ P V + + +P+ P SL A +K DLL +ML DP+KRIS
Sbjct: 251 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 310
Query: 287 AKKAMEHPYFD 297
A++HPY +
Sbjct: 311 VDDALQHPYIN 321
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 25/311 (8%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +YLV E MD +L + I+ + + L+YQ
Sbjct: 82 HK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM------ELDHERMSYLLYQ 134
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYR 192
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E+V LFPG + Q + LGTP +K
Sbjct: 193 APEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 237 VWPGVSSLMNWH------EYPQWNPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRIS 286
+ P V + + +P+ P SL A +K DLL +ML DP+KRIS
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 287 AKKAMEHPYFD 297
A++HPY +
Sbjct: 312 VDDALQHPYIN 322
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 25/311 (8%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +YLV E MD +L + I+ + + L+YQ
Sbjct: 82 HK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM------ELDHERMSYLLYQ 134
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYR 192
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E+V LFPG + Q + LGTP +K
Sbjct: 193 APEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 237 VWPGVSSLMNWH------EYPQWNPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRIS 286
+ P V + + +P+ P SL A +K DLL +ML DP+KRIS
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 287 AKKAMEHPYFD 297
A++HPY +
Sbjct: 312 VDDALQHPYIN 322
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 25/311 (8%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +YLV E MD +L + I+ + + L+YQ
Sbjct: 83 HK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM------ELDHERMSYLLYQ 135
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYR 193
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E+V LFPG + Q + LGTP +K
Sbjct: 194 APEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 252
Query: 237 VWPGVSSLMNWH------EYPQWNPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRIS 286
+ P V + + +P+ P SL A +K DLL +ML DP+KRIS
Sbjct: 253 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 312
Query: 287 AKKAMEHPYFD 297
A++HPY +
Sbjct: 313 VDDALQHPYIN 323
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 25/311 (8%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +YLV E MD +L + I+ + + L+YQ
Sbjct: 83 HK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM------ELDHERMSYLLYQ 135
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYR 193
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E+V LFPG + Q + LGTP +K
Sbjct: 194 APEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 252
Query: 237 VWPGVSSLMNWH------EYPQWNPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRIS 286
+ P V + + +P+ P SL A +K DLL +ML DP+KRIS
Sbjct: 253 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 312
Query: 287 AKKAMEHPYFD 297
A++HPY +
Sbjct: 313 VDDALQHPYIN 323
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 25/311 (8%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +YLV E MD +L + I+ + + L+YQ
Sbjct: 76 HK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM------ELDHERMSYLLYQ 128
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 129 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYR 186
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E+V LFPG + Q + LGTP +K
Sbjct: 187 APEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 245
Query: 237 VWPGVSSLMNWH------EYPQWNPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRIS 286
+ P V + + +P+ P SL A +K DLL +ML DP+KRIS
Sbjct: 246 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 305
Query: 287 AKKAMEHPYFD 297
A++HPY +
Sbjct: 306 VDDALQHPYIN 316
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 25/311 (8%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +YLV E MD +L + I+ + + L+YQ
Sbjct: 76 HK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM------ELDHERMSYLLYQ 128
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 129 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYR 186
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E+V LFPG + Q + LGTP +K
Sbjct: 187 APEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 245
Query: 237 VWPGVSSLMNWH------EYPQWNPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRIS 286
+ P V + + +P+ P SL A +K DLL +ML DP+KRIS
Sbjct: 246 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 305
Query: 287 AKKAMEHPYFD 297
A++HPY +
Sbjct: 306 VDDALQHPYIN 316
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 25/311 (8%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 119
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +YLV E MD +L + I+ + + L+YQ
Sbjct: 120 HK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM------ELDHERMSYLLYQ 172
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 173 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYR 230
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E+V LFPG + Q + LGTP +K
Sbjct: 231 APEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289
Query: 237 VWPGVSSLMNWH------EYPQWNPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRIS 286
+ P V + + +P+ P SL A +K DLL +ML DP+KRIS
Sbjct: 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 349
Query: 287 AKKAMEHPYFD 297
A++HPY +
Sbjct: 350 VDDALQHPYIN 360
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 25/311 (8%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +YLV E MD +L + I+ + + L+YQ
Sbjct: 82 HK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM------ELDHERMSYLLYQ 134
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDFGLARTAGTSFM-MTPYVVTRYYR 192
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E+V LFPG + Q + LGTP +K
Sbjct: 193 APEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 237 VWPGVSSLMNWH------EYPQWNPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRIS 286
+ P V + + +P+ P SL A +K DLL +ML DP+KRIS
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 287 AKKAMEHPYFD 297
A++HPY +
Sbjct: 312 VDDALQHPYIN 322
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 25/311 (8%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 74
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +YLV E MD +L + I+ + + L+YQ
Sbjct: 75 HK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM------ELDHERMSYLLYQ 127
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 128 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYR 185
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E+V LFPG + Q + LGTP +K
Sbjct: 186 APEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244
Query: 237 VWPGVSSLMNWH------EYPQWNPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRIS 286
+ P V + + +P+ P SL A +K DLL +ML DP+KRIS
Sbjct: 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 304
Query: 287 AKKAMEHPYFD 297
A++HPY +
Sbjct: 305 VDDALQHPYIN 315
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 137 bits (344), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 155/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D +E + KVG G Y +V+ + K + RE+ IL+ L
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 86
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P++V+L+D+ + Q+ + + L+FEY++ F+ + ++ +Y+L K
Sbjct: 87 PNIVKLLDIVRDQHSKTPS---LIFEYVNN------TDFKVLYPTLTDYDIRYYIYELLK 137
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P K+Y + + +++ PE
Sbjct: 138 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPE 196
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW---- 238
+L+ Y ++DMWS+ C+FA ++ K F G QL+ I ++LGT V+
Sbjct: 197 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKY 256
Query: 239 -----PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
P + +L+ H W A + + +D L+++L+YD +R++A +AM H
Sbjct: 257 RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 316
Query: 294 PYF 296
PYF
Sbjct: 317 PYF 319
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 137 bits (344), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 155/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D +E + KVG G Y +V+ + K + RE+ IL+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 85
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P++V+L+D+ + Q+ + + L+FEY++ F+ + ++ +Y+L K
Sbjct: 86 PNIVKLLDIVRDQHSKTPS---LIFEYVNN------TDFKVLYPTLTDYDIRYYIYELLK 136
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P K+Y + + +++ PE
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPE 195
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW---- 238
+L+ Y ++DMWS+ C+FA ++ K F G QL+ I ++LGT V+
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKY 255
Query: 239 -----PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
P + +L+ H W A + + +D L+++L+YD +R++A +AM H
Sbjct: 256 RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 294 PYF 296
PYF
Sbjct: 316 PYF 318
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 155/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D +E + KVG G Y +V+ + K + RE+ IL+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 85
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P++V+L+D+ + Q+ + + L+FEY++ F+ + ++ +Y+L K
Sbjct: 86 PNIVKLLDIVRDQHSKTPS---LIFEYVNN------TDFKVLYPTLTDYDIRYYIYELLK 136
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P K+Y + + +++ PE
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPE 195
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW---- 238
+L+ Y ++DMWS+ C+FA ++ K F G QL+ I ++LGT V+
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKY 255
Query: 239 -----PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
P + +L+ H W A + + +D L+++L+YD +R++A +AM H
Sbjct: 256 RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 294 PYF 296
PYF
Sbjct: 316 PYF 318
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 155/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D +E + KVG G Y +V+ + K + RE+ IL+ L
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 86
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P++V+L+D+ + Q+ + + L+FEY++ F+ + ++ +Y+L K
Sbjct: 87 PNIVKLLDIVRDQHSKTPS---LIFEYVNN------TDFKVLYPTLTDYDIRYYIYELLK 137
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P K+Y + + +++ PE
Sbjct: 138 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPE 196
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW---- 238
+L+ Y ++DMWS+ C+FA ++ K F G QL+ I ++LGT V+
Sbjct: 197 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKY 256
Query: 239 -----PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
P + +L+ H W A + + +D L+++L+YD +R++A +AM H
Sbjct: 257 RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 316
Query: 294 PYF 296
PYF
Sbjct: 317 PYF 319
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 155/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D +E + KVG G Y +V+ + K + RE+ IL+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P++V+L+D+ + Q+ + + L+FEY++ F+ + ++ +Y+L K
Sbjct: 86 PNIVKLLDIVRDQHSKTPS---LIFEYVNN------TDFKVLYPTLTDYDIRYYIYELLK 136
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P K+Y + + +++ PE
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPE 195
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW---- 238
+L+ Y ++DMWS+ C+FA ++ K F G QL+ I ++LGT V+
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKY 255
Query: 239 -----PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
P + +L+ H W A + + +D L+++L+YD +R++A +AM H
Sbjct: 256 RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 294 PYF 296
PYF
Sbjct: 316 PYF 318
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 155/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D +E + KVG G Y +V+ + K + RE+ IL+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P++V+L+D+ + Q+ + + L+FEY++ F+ + ++ +Y+L K
Sbjct: 86 PNIVKLLDIVRDQHSKTPS---LIFEYVNN------TDFKVLYPTLTDYDIRYYIYELLK 136
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P K+Y + + +++ PE
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPE 195
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW---- 238
+L+ Y ++DMWS+ C+FA ++ K F G QL+ I ++LGT V+
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKY 255
Query: 239 -----PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
P + +L+ H W A + + +D L+++L+YD +R++A +AM H
Sbjct: 256 RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 294 PYF 296
PYF
Sbjct: 316 PYF 318
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 155/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D +E + KVG G Y +V+ + K + RE+ IL+ L
Sbjct: 33 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 87
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P++V+L+D+ + Q+ + + L+FEY++ F+ + ++ +Y+L K
Sbjct: 88 PNIVKLLDIVRDQHSKTPS---LIFEYVNN------TDFKVLYPTLTDYDIRYYIYELLK 138
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P K+Y + + +++ PE
Sbjct: 139 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPE 197
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW---- 238
+L+ Y ++DMWS+ C+FA ++ K F G QL+ I ++LGT V+
Sbjct: 198 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKY 257
Query: 239 -----PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
P + +L+ H W A + + +D L+++L+YD +R++A +AM H
Sbjct: 258 RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 317
Query: 294 PYF 296
PYF
Sbjct: 318 PYF 320
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 155/313 (49%), Gaps = 29/313 (9%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +Y+V E MD +L + I+ + + L+YQ
Sbjct: 82 HK-NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM------ELDHERMSYLLYQ 134
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T E++T +YR
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFM-MTPEVVTRYYR 192
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E++ LFPG + Q + LGTP +K
Sbjct: 193 APEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 251
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNL------------DKDGLDLLEQMLQYDPSKR 284
+ P V + + P++ S P++ DLL +ML D SKR
Sbjct: 252 LQPTVRTYV--ENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKR 309
Query: 285 ISAKKAMEHPYFD 297
IS +A++HPY +
Sbjct: 310 ISVDEALQHPYIN 322
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 155/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D +E + KVG G Y +V+ + K + RE+ IL+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P++V+L+D+ + Q+ + + L+FEY++ F+ + ++ +Y+L K
Sbjct: 86 PNIVKLLDIVRDQHSKTPS---LIFEYVNN------TDFKVLYPTLTDYDIRYYIYELLK 136
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P K+Y + + +++ PE
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPE 195
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW---- 238
+L+ Y ++DMWS+ C+FA ++ K F G QL+ I ++LGT V+
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKY 255
Query: 239 -----PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
P + +L+ H W A + + +D L+++L+YD +R++A +AM H
Sbjct: 256 RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 294 PYF 296
PYF
Sbjct: 316 PYF 318
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 152/314 (48%), Gaps = 33/314 (10%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ +++L+ +G G G V A + G VA+KK ++ RE+ +L+ ++
Sbjct: 20 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN 79
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +YLV E MD +L + I + + L+YQ
Sbjct: 80 HK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM------ELDHERMSYLLYQ 132
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR + T ++T +YR
Sbjct: 133 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTASTNFM-MTPYVVTRYYR 190
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP------- 233
APEV+LG Y VD+WSV CI ELV + +F G + Q + LGTP
Sbjct: 191 APEVILG-MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAA 249
Query: 234 ----------NEKVWPGVSSLMNWHE-YPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPS 282
N +PG++ + E +P W S + DLL +ML DP
Sbjct: 250 LQPTVRNYVENRPAYPGIA----FEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPD 305
Query: 283 KRISAKKAMEHPYF 296
KRIS +A+ HPY
Sbjct: 306 KRISVDEALRHPYI 319
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 148/302 (49%), Gaps = 22/302 (7%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK---------TRLHEDDEGVPPTTLREVSILRMLSR 62
+ G+YG V A + G VA+K+ T D + LRE+ +L
Sbjct: 30 ISSGSYGAVC-AGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P+++ L D+ + LYLV E M TDL + I R I ++ MY +
Sbjct: 89 -PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIV---ISPQHIQYFMYHIL 144
Query: 123 KGVAFCHGHGILHRDLKPHNLLM-DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
G+ H G++HRDL P N+L+ D +T I D LAR T K TH + WYRA
Sbjct: 145 LGLHVLHEAGVVHRDLHPGNILLADNNDIT--ICDFNLAREDTADANK-THYVTHRWYRA 201
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP--NEKVWP 239
PE+++ ++ VDMWS C+ AE+ + ALF G + QL I ++GTP + V
Sbjct: 202 PELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMF 261
Query: 240 GVSSLMNWHEYPQWNPQSLA--TAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
S ++ N + A VP D LDL+ +ML+++P +RIS ++A+ HPYF+
Sbjct: 262 SSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321
Query: 298 DL 299
L
Sbjct: 322 SL 323
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 148/302 (49%), Gaps = 22/302 (7%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK---------TRLHEDDEGVPPTTLREVSILRMLSR 62
+ G+YG V A + G VA+K+ T D + LRE+ +L
Sbjct: 30 ISSGSYGAVC-AGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P+++ L D+ + LYLV E M TDL + I R I ++ MY +
Sbjct: 89 -PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIV---ISPQHIQYFMYHIL 144
Query: 123 KGVAFCHGHGILHRDLKPHNLLM-DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
G+ H G++HRDL P N+L+ D +T I D LAR T K TH + WYRA
Sbjct: 145 LGLHVLHEAGVVHRDLHPGNILLADNNDIT--ICDFNLAREDTADANK-THYVTHRWYRA 201
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP--NEKVWP 239
PE+++ ++ VDMWS C+ AE+ + ALF G + QL I ++GTP + V
Sbjct: 202 PELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMF 261
Query: 240 GVSSLMNWHEYPQWNPQSLA--TAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
S ++ N + A VP D LDL+ +ML+++P +RIS ++A+ HPYF+
Sbjct: 262 SSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321
Query: 298 DL 299
L
Sbjct: 322 SL 323
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 156/313 (49%), Gaps = 29/313 (9%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ ++++++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +Y+V E MD +L + I+ + + L+YQ
Sbjct: 82 HK-NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM------ELDHERMSYLLYQ 134
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSFM-MTPYVVTRYYR 192
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E++ LFPG + Q + LGTP+ +K
Sbjct: 193 APEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNL------------DKDGLDLLEQMLQYDPSKR 284
+ P V + + P++ S P++ DLL +ML D SKR
Sbjct: 252 LQPTVRTYV--ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 285 ISAKKAMEHPYFD 297
IS +A++HPY +
Sbjct: 310 ISVDEALQHPYIN 322
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 155/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D +E + KVG G Y +V+ + K + RE+ IL+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLMGG 85
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P++V+L+D+ + Q+ + + L+FEY++ F+ + ++ +Y+L K
Sbjct: 86 PNIVKLLDIVRDQHSKTPS---LIFEYVNN------TDFKVLYPTLTDYDIRYYIYELLK 136
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P K+Y + + +++ PE
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPE 195
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW---- 238
+L+ Y ++DMWS+ C+FA ++ K F G QL+ I ++LGT V+
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKY 255
Query: 239 -----PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
P + +L+ H W A + + +D L+++L+YD +R++A +AM H
Sbjct: 256 RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 294 PYF 296
PYF
Sbjct: 316 PYF 318
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 156/313 (49%), Gaps = 29/313 (9%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ ++++++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +Y+V E MD +L + I+ + + L+YQ
Sbjct: 82 HK-NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM------ELDHERMSYLLYQ 134
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSFM-MTPYVVTRYYR 192
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E++ LFPG + Q + LGTP+ +K
Sbjct: 193 APEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNL------------DKDGLDLLEQMLQYDPSKR 284
+ P V + + P++ S P++ DLL +ML D SKR
Sbjct: 252 LQPTVRTYV--ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 285 ISAKKAMEHPYFD 297
IS +A++HPY +
Sbjct: 310 ISVDEALQHPYIN 322
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 151/310 (48%), Gaps = 25/310 (8%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ +++L+ +G G G V A + G VA+KK ++ RE+ +L+ ++
Sbjct: 22 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN 81
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +YLV E MD +L + I + + L+YQ
Sbjct: 82 HK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM------ELDHERMSYLLYQ 134
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTACTNFM-MTPYVVTRYYR 192
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APEV+LG Y+ VD+WSV CI ELV +F G + Q + LGTP+ +
Sbjct: 193 APEVILG-MGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAA 251
Query: 241 VS-SLMNWHE-------------YPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
+ ++ N+ E +P W S + DLL +ML DP KRIS
Sbjct: 252 LQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRIS 311
Query: 287 AKKAMEHPYF 296
+A+ HPY
Sbjct: 312 VDEALRHPYI 321
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 155/313 (49%), Gaps = 29/313 (9%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +Y+V E MD +L + I+ + + L+YQ
Sbjct: 82 HK-NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM------ELDHERMSYLLYQ 134
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSFM-MTPYVVTRYYR 192
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E++ LFPG + Q + LGTP+ +K
Sbjct: 193 APEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNL------------DKDGLDLLEQMLQYDPSKR 284
+ P V + + P++ S P++ DLL +ML D SKR
Sbjct: 252 LQPTVRTYV--ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 285 ISAKKAMEHPYFD 297
IS +A++HPY +
Sbjct: 310 ISVDEALQHPYIN 322
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 158/303 (52%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D ++ + K+G G Y +V+ A + VA+K + RE+ IL L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKP-----VKKKKIKREIKILENLRGG 91
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P+++ L D+ + + RT LVFE+++ F+Q + + ++ MY++ K
Sbjct: 92 PNIITLADIVK--DPVSRTPA-LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILK 142
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+L+D + L++ D GLA F P ++Y + + +++ PE
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 201
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTP--------- 233
+L+ Y ++DMWS+ C+ A ++ K F G QL+ I ++LGT
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 261
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
N ++ P + ++ H +W + + + LD L+++L+YD R++A++AMEH
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 294 PYF 296
PYF
Sbjct: 322 PYF 324
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 155/313 (49%), Gaps = 29/313 (9%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +Y+V E MD +L + I+ + + L+YQ
Sbjct: 82 HK-NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM------ELDHERMSYLLYQ 134
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYR 192
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E++ LFPG + Q + LGTP+ +K
Sbjct: 193 APEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNL------------DKDGLDLLEQMLQYDPSKR 284
+ P V + + P++ S P++ DLL +ML D SKR
Sbjct: 252 LQPTVRTYV--ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 285 ISAKKAMEHPYFD 297
IS +A++HPY +
Sbjct: 310 ISVDEALQHPYIN 322
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 154/303 (50%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D +E + KVG G Y +V+ + K + RE+ IL+ L
Sbjct: 52 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 106
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P++V+L+D+ + Q+ + + L+FEY++ F+ + ++ +Y+L K
Sbjct: 107 PNIVKLLDIVRDQHSKTPS---LIFEYVNN------TDFKVLYPTLTDYDIRYYIYELLK 157
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P K+Y + + +++ PE
Sbjct: 158 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPE 216
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW---- 238
+L+ Y ++DMWS+ C+FA ++ K F G QL+ I ++LGT +
Sbjct: 217 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKY 276
Query: 239 -----PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
P + +L+ H W A + + +D L+++L+YD +R++A +AM H
Sbjct: 277 RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 336
Query: 294 PYF 296
PYF
Sbjct: 337 PYF 339
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 155/313 (49%), Gaps = 29/313 (9%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +Y+V E MD +L + I+ + + L+YQ
Sbjct: 82 HK-NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM------ELDHERMSYLLYQ 134
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYR 192
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E++ LFPG + Q + LGTP+ +K
Sbjct: 193 APEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNL------------DKDGLDLLEQMLQYDPSKR 284
+ P V + + P++ S P++ DLL +ML D SKR
Sbjct: 252 LQPTVRTYV--ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 285 ISAKKAMEHPYFD 297
IS +A++HPY +
Sbjct: 310 ISVDEALQHPYIN 322
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 154/313 (49%), Gaps = 29/313 (9%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +Y+V E MD +L + I+ + + L+YQ
Sbjct: 82 HK-NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM------ELDHERMSYLLYQ 134
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR E++T +YR
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFM-MEPEVVTRYYR 192
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E+V LFPG + Q + LGTP +K
Sbjct: 193 APEVILG-MGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNL------------DKDGLDLLEQMLQYDPSKR 284
+ P V + + P++ S P++ DLL +ML D SKR
Sbjct: 252 LQPTVRTYV--ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 285 ISAKKAMEHPYFD 297
IS +A++HPY +
Sbjct: 310 ISVDEALQHPYIN 322
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 154/313 (49%), Gaps = 29/313 (9%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +Y+V E MD +L + I+ + + L+YQ
Sbjct: 82 HK-NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM------ELDHERMSYLLYQ 134
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR E++T +YR
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFM-MEPEVVTRYYR 192
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E+V LFPG + Q + LGTP +K
Sbjct: 193 APEVILG-MGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKK 251
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNL------------DKDGLDLLEQMLQYDPSKR 284
+ P V + + P++ S P++ DLL +ML D SKR
Sbjct: 252 LQPTVRNYV--ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 285 ISAKKAMEHPYFD 297
IS +A++HPY +
Sbjct: 310 ISVDEALQHPYIN 322
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 134 bits (336), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 154/313 (49%), Gaps = 29/313 (9%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +Y+V E MD +L + I+ + + L+YQ
Sbjct: 83 HK-NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM------ELDHERMSYLLYQ 135
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYR 193
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E++ LFPG + Q + LGTP +K
Sbjct: 194 APEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 252
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNL------------DKDGLDLLEQMLQYDPSKR 284
+ P V + + P++ S P++ DLL +ML D SKR
Sbjct: 253 LQPTVRTYV--ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 310
Query: 285 ISAKKAMEHPYFD 297
IS +A++HPY +
Sbjct: 311 ISVDEALQHPYIN 323
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 133 bits (335), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 154/313 (49%), Gaps = 29/313 (9%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +Y+V E MD +L + I+ + + L+YQ
Sbjct: 82 HK-NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM------ELDHERMSYLLYQ 134
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYR 192
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E++ LFPG + Q + LGTP +K
Sbjct: 193 APEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 251
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNL------------DKDGLDLLEQMLQYDPSKR 284
+ P V + + P++ S P++ DLL +ML D SKR
Sbjct: 252 LQPTVRTYV--ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 285 ISAKKAMEHPYFD 297
IS +A++HPY +
Sbjct: 310 ISVDEALQHPYIN 322
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 154/313 (49%), Gaps = 29/313 (9%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 27 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 86
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +Y+V E MD +L + I+ + + L+YQ
Sbjct: 87 HK-NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM------ELDHERMSYLLYQ 139
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 140 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYR 197
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E+V LFPG + Q + LGTP +K
Sbjct: 198 APEVILG-MGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 256
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNL------------DKDGLDLLEQMLQYDPSKR 284
+ P V + + P++ S P++ DLL +ML D SKR
Sbjct: 257 LQPTVRTYV--ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 314
Query: 285 ISAKKAMEHPYFD 297
IS +A++HPY +
Sbjct: 315 ISVDEALQHPYIN 327
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 154/313 (49%), Gaps = 29/313 (9%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +Y+V E MD +L + I+ + + L+YQ
Sbjct: 76 HK-NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM------ELDHERMSYLLYQ 128
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 129 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYR 186
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E+V LFPG + Q + LGTP +K
Sbjct: 187 APEVILG-MGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 245
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNL------------DKDGLDLLEQMLQYDPSKR 284
+ P V + + P++ S P++ DLL +ML D SKR
Sbjct: 246 LQPTVRTYV--ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 303
Query: 285 ISAKKAMEHPYFD 297
IS +A++HPY +
Sbjct: 304 ISVDEALQHPYIN 316
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 159/306 (51%), Gaps = 31/306 (10%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D ++ + K+G G Y +V+ A I ++ + REV IL L
Sbjct: 38 DDYQLVRKLGRGKYSEVFEAI-----NITNNERVVVKILKPVKKKKIKREVKILENLRGG 92
Query: 64 PHVVRLMD-VKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
++++L+D VK +K LVFEY++ F+Q + + ++ MY+L
Sbjct: 93 TNIIKLIDTVKDPVSKTPA----LVFEYINN------TDFKQLYQILTDFDIRFYMYELL 142
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
K + +CH GI+HRD+KPHN+++D + L++ D GLA F P ++Y + + +++ P
Sbjct: 143 KALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGP 201
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW--- 238
E+L+ Y ++DMWS+ C+ A ++ + F G QL+ I ++LGT E+++
Sbjct: 202 ELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT--EELYGYL 259
Query: 239 --------PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKA 290
P + ++ H +W + + + LDLL+++L+YD +R++AK+A
Sbjct: 260 KKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEA 319
Query: 291 MEHPYF 296
MEHPYF
Sbjct: 320 MEHPYF 325
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 159/306 (51%), Gaps = 31/306 (10%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D ++ + K+G G Y +V+ A I ++ + REV IL L
Sbjct: 43 DDYQLVRKLGRGKYSEVFEAI-----NITNNERVVVKILKPVKKKKIKREVKILENLRGG 97
Query: 64 PHVVRLMD-VKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
++++L+D VK +K LVFEY++ F+Q + + ++ MY+L
Sbjct: 98 TNIIKLIDTVKDPVSKTPA----LVFEYINN------TDFKQLYQILTDFDIRFYMYELL 147
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
K + +CH GI+HRD+KPHN+++D + L++ D GLA F P ++Y + + +++ P
Sbjct: 148 KALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGP 206
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW--- 238
E+L+ Y ++DMWS+ C+ A ++ + F G QL+ I ++LGT E+++
Sbjct: 207 ELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT--EELYGYL 264
Query: 239 --------PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKA 290
P + ++ H +W + + + LDLL+++L+YD +R++AK+A
Sbjct: 265 KKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEA 324
Query: 291 MEHPYF 296
MEHPYF
Sbjct: 325 MEHPYF 330
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 155/313 (49%), Gaps = 29/313 (9%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ ++++++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +Y+V E MD +L + I+ + + L+YQ
Sbjct: 82 HK-NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM------ELDHERMSYLLYQ 134
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSFM-MTPYVVTRYYR 192
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV I E++ LFPG + Q + LGTP+ +K
Sbjct: 193 APEVILG-MGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNL------------DKDGLDLLEQMLQYDPSKR 284
+ P V + + P++ S P++ DLL +ML D SKR
Sbjct: 252 LQPTVRTYV--ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 285 ISAKKAMEHPYFD 297
IS +A++HPY +
Sbjct: 310 ISVDEALQHPYIN 322
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 155/313 (49%), Gaps = 29/313 (9%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ ++++++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +Y+V E MD +L + I+ + + L+YQ
Sbjct: 82 HK-NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM------ELDHERMSYLLYQ 134
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR T ++T +YR
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSFM-MTPYVVTRYYR 192
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV I E++ LFPG + Q + LGTP+ +K
Sbjct: 193 APEVILG-MGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNL------------DKDGLDLLEQMLQYDPSKR 284
+ P V + + P++ S P++ DLL +ML D SKR
Sbjct: 252 LQPTVRTYV--ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 285 ISAKKAMEHPYFD 297
IS +A++HPY +
Sbjct: 310 ISVDEALQHPYIN 322
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 153/313 (48%), Gaps = 29/313 (9%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V+ ++ L+ +G G G V A + + VA+KK ++ RE+ +++ ++
Sbjct: 24 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 83
Query: 62 RDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+++ L++V Q E +Y+V E MD +L + I+ + + L+YQ
Sbjct: 84 HK-NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM------ELDHERMSYLLYQ 136
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ G+ H GI+HRDLKP N+++ + TLKI D GLAR ++T +YR
Sbjct: 137 MLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMVPF-VVTRYYR 194
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN----EK 236
APEV+LG Y VD+WSV CI E++ LFPG + Q + LGTP +K
Sbjct: 195 APEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 253
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNL------------DKDGLDLLEQMLQYDPSKR 284
+ P V + + P++ S P++ DLL +ML D SKR
Sbjct: 254 LQPTVRTYV--ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 311
Query: 285 ISAKKAMEHPYFD 297
IS +A++HPY +
Sbjct: 312 ISVDEALQHPYIN 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 157/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D ++ + K+G G Y +V+ A + V +K + RE+ IL L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENLRGG 91
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P+++ L D+ + + RT LVFE+++ F+Q + + ++ MY++ K
Sbjct: 92 PNIITLADIVK--DPVSRTPA-LVFEHVNN------TDFKQLRQTLTDYDIRFYMYEILK 142
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P ++Y + + +++ PE
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 201
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTP--------- 233
+L+ Y ++DMWS+ C+ A ++ K F G QL+ I ++LGT
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 261
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
N ++ P + ++ H +W + + + LD L+++L+YD R++A++AMEH
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 294 PYF 296
PYF
Sbjct: 322 PYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 157/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D ++ + K+G G Y +V+ A + V +K + RE+ IL L
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENLRGG 89
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P+++ L D+ + + RT LVFE+++ F+Q + + ++ MY++ K
Sbjct: 90 PNIITLADIVK--DPVSRTPA-LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILK 140
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P ++Y + + +++ PE
Sbjct: 141 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 199
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTP--------- 233
+L+ Y ++DMWS+ C+ A ++ K F G QL+ I ++LGT
Sbjct: 200 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 259
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
N ++ P + ++ H +W + + + LD L+++L+YD R++A++AMEH
Sbjct: 260 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319
Query: 294 PYF 296
PYF
Sbjct: 320 PYF 322
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 157/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D ++ + K+G G Y +V+ A + V +K + RE+ IL L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENLRGG 91
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P+++ L D+ + + RT LVFE+++ F+Q + + ++ MY++ K
Sbjct: 92 PNIITLADIVK--DPVSRTPA-LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILK 142
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P ++Y + + +++ PE
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 201
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTP--------- 233
+L+ Y ++DMWS+ C+ A ++ K F G QL+ I ++LGT
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 261
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
N ++ P + ++ H +W + + + LD L+++L+YD R++A++AMEH
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 294 PYF 296
PYF
Sbjct: 322 PYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 157/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D ++ + K+G G Y +V+ A + V +K + RE+ IL L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENLRGG 91
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P+++ L D+ + + RT LVFE+++ F+Q + + ++ MY++ K
Sbjct: 92 PNIITLADIVK--DPVSRTPA-LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILK 142
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P ++Y + + +++ PE
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 201
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTP--------- 233
+L+ Y ++DMWS+ C+ A ++ K F G QL+ I ++LGT
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 261
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
N ++ P + ++ H +W + + + LD L+++L+YD R++A++AMEH
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 294 PYF 296
PYF
Sbjct: 322 PYF 324
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 157/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D ++ + K+G G Y +V+ A + V +K + RE+ IL L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENLRGG 91
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P+++ L D+ + + RT LVFE+++ F+Q + + ++ MY++ K
Sbjct: 92 PNIITLADIVK--DPVSRTPA-LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILK 142
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P ++Y + + +++ PE
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 201
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTP--------- 233
+L+ Y ++DMWS+ C+ A ++ K F G QL+ I ++LGT
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 261
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
N ++ P + ++ H +W + + + LD L+++L+YD R++A++AMEH
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 294 PYF 296
PYF
Sbjct: 322 PYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 157/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D ++ + K+G G Y +V+ A + V +K + RE+ IL L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENLRGG 91
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P+++ L D+ + + RT LVFE+++ F+Q + + ++ MY++ K
Sbjct: 92 PNIITLADIVK--DPVSRTPA-LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILK 142
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P ++Y + + +++ PE
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 201
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTP--------- 233
+L+ Y ++DMWS+ C+ A ++ K F G QL+ I ++LGT
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 261
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
N ++ P + ++ H +W + + + LD L+++L+YD R++A++AMEH
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 294 PYF 296
PYF
Sbjct: 322 PYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 157/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D ++ + K+G G Y +V+ A + V +K + RE+ IL L
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENLRGG 90
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P+++ L D+ + + RT LVFE+++ F+Q + + ++ MY++ K
Sbjct: 91 PNIITLADIVK--DPVSRTPA-LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILK 141
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P ++Y + + +++ PE
Sbjct: 142 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 200
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTP--------- 233
+L+ Y ++DMWS+ C+ A ++ K F G QL+ I ++LGT
Sbjct: 201 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 260
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
N ++ P + ++ H +W + + + LD L+++L+YD R++A++AMEH
Sbjct: 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320
Query: 294 PYF 296
PYF
Sbjct: 321 PYF 323
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 157/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D ++ + K+G G Y +V+ A + V +K + RE+ IL L
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENLRGG 90
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P+++ L D+ + + RT LVFE+++ F+Q + + ++ MY++ K
Sbjct: 91 PNIITLADIVK--DPVSRTPA-LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILK 141
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P ++Y + + +++ PE
Sbjct: 142 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 200
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTP--------- 233
+L+ Y ++DMWS+ C+ A ++ K F G QL+ I ++LGT
Sbjct: 201 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 260
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
N ++ P + ++ H +W + + + LD L+++L+YD R++A++AMEH
Sbjct: 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320
Query: 294 PYF 296
PYF
Sbjct: 321 PYF 323
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 157/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D ++ + K+G G Y +V+ A + V +K + RE+ IL L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENLRGG 91
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P+++ L D+ + + RT LVFE+++ F+Q + + ++ MY++ K
Sbjct: 92 PNIITLADIVK--DPVSRTPA-LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILK 142
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P ++Y + + +++ PE
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 201
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTP--------- 233
+L+ Y ++DMWS+ C+ A ++ K F G QL+ I ++LGT
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 261
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
N ++ P + ++ H +W + + + LD L+++L+YD R++A++AMEH
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 294 PYF 296
PYF
Sbjct: 322 PYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 157/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D ++ + K+G G Y +V+ A + V +K + RE+ IL L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENLRGG 91
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P+++ L D+ + + RT LVFE+++ F+Q + + ++ MY++ K
Sbjct: 92 PNIITLADIVK--DPVSRTPA-LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILK 142
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P ++Y + + +++ PE
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 201
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTP--------- 233
+L+ Y ++DMWS+ C+ A ++ K F G QL+ I ++LGT
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 261
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
N ++ P + ++ H +W + + + LD L+++L+YD R++A++AMEH
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 294 PYF 296
PYF
Sbjct: 322 PYF 324
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 157/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D ++ + K+G G Y +V+ A + V +K + RE+ IL L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENLRGG 91
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P+++ L D+ + + RT LVFE+++ F+Q + + ++ MY++ K
Sbjct: 92 PNIITLADIVK--DPVSRTPA-LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILK 142
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P ++Y + + +++ PE
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPE 201
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTP--------- 233
+L+ Y ++DMWS+ C+ A ++ K F G QL+ I ++LGT
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 261
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
N ++ P + ++ H +W + + + LD L+++L+YD R++A++AMEH
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 294 PYF 296
PYF
Sbjct: 322 PYF 324
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 157/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D ++ + K+G G Y +V+ A + V +K + RE+ IL L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENLRGG 91
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P+++ L D+ + + RT LVFE+++ F+Q + + ++ MY++ K
Sbjct: 92 PNIITLADIVK--DPVSRTPA-LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILK 142
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P ++Y + + +++ PE
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 201
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTP--------- 233
+L+ Y ++DMWS+ C+ A ++ K F G QL+ I ++LGT
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 261
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
N ++ P + ++ H +W + + + LD L+++L+YD R++A++AMEH
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 294 PYF 296
PYF
Sbjct: 322 PYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 157/303 (51%), Gaps = 25/303 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D ++ + K+G G Y +V+ A + V +K + RE+ IL L
Sbjct: 42 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK-----PVKKKKIKREIKILENLRGG 96
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P+++ L D+ + + RT LVFE+++ F+Q + + ++ MY++ K
Sbjct: 97 PNIITLADIVK--DPVSRTPA-LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILK 147
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ +CH GI+HRD+KPHN+++D + L++ D GLA F P ++Y + + +++ PE
Sbjct: 148 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 206
Query: 184 VLLGSTHYSTAVDMWSVACIFAELV-TKTALFPGDSELQQLLHIFRLLGTP--------- 233
+L+ Y ++DMWS+ C+ A ++ K F G QL+ I ++LGT
Sbjct: 207 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 266
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
N ++ P + ++ H +W + + + LD L+++L+YD R++A++AMEH
Sbjct: 267 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 326
Query: 294 PYF 296
PYF
Sbjct: 327 PYF 329
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 147/299 (49%), Gaps = 44/299 (14%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+++++K+G G YG+V R+K T A+K R L EV++L++L P+
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH-PN 97
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFE-YMDTDLKKYIRSFRQTGENIPVNTVKS--LMYQLC 122
+++L D E + YLV E Y +L F + + N V + ++ Q+
Sbjct: 98 IMKLYDFF-----EDKRNYYLVMECYKGGEL------FDEIIHRMKFNEVDAAVIIKQVL 146
Query: 123 KGVAFCHGHGILHRDLKPHNLLMD--RKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
GV + H H I+HRDLKP NLL++ K +KI D GL+ F KK + T +Y
Sbjct: 147 SGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ-KKMKERLGTAYYI 205
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APEVL Y D+WS+ I L+ F G ++ Q++L KV G
Sbjct: 206 APEVL--RKKYDEKCDVWSIGVILFILLAGYPPFGGQTD-QEILR----------KVEKG 252
Query: 241 VSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+ + P+W N+ + DL++QMLQ+D +RISA++A+EHP+ ++
Sbjct: 253 KYTF----DSPEW---------KNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 158/328 (48%), Gaps = 51/328 (15%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+E L+ +G+G++G+V +A + + VALK R +++ E+ IL L +
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVR---NEKRFHRQAAEEIRILEHLRKQDK 155
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
+ + +N R + + FE + +L + I+ + G ++P+ V+ + + + +
Sbjct: 156 DNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPL--VRKFAHSILQCL 213
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMT-LKIADLGLARAFTLPIKKYTHE-----ILTLWY 179
H + I+H DLKP N+L+ ++ + +K+ D G + Y H+ I + +Y
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--------CYEHQRVYTXIQSRFY 265
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWP 239
RAPEV+LG+ Y +DMWS+ CI AEL+T L PG+ E QL + LLG P++K+
Sbjct: 266 RAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLD 324
Query: 240 GVSSLMNW---HEYPQWN-------------------------PQS--LATAVPNLDKD- 268
N+ YP++ P+S A+ D
Sbjct: 325 ASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPL 384
Query: 269 GLDLLEQMLQYDPSKRISAKKAMEHPYF 296
LD L+Q L++DP+ R++ +A+ HP+
Sbjct: 385 FLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 158/328 (48%), Gaps = 51/328 (15%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+E L+ +G+G++G+V +A + + VALK R +++ E+ IL L +
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVR---NEKRFHRQAAEEIRILEHLRKQDK 155
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
+ + +N R + + FE + +L + I+ + G ++P+ V+ + + + +
Sbjct: 156 DNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPL--VRKFAHSILQCL 213
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMT-LKIADLGLARAFTLPIKKYTHE-----ILTLWY 179
H + I+H DLKP N+L+ ++ + +K+ D G + Y H+ I + +Y
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--------CYEHQRVYTXIQSRFY 265
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWP 239
RAPEV+LG+ Y +DMWS+ CI AEL+T L PG+ E QL + LLG P++K+
Sbjct: 266 RAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLD 324
Query: 240 GVSSLMNW---HEYPQWN-------------------------PQS--LATAVPNLDKD- 268
N+ YP++ P+S A+ D
Sbjct: 325 ASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPL 384
Query: 269 GLDLLEQMLQYDPSKRISAKKAMEHPYF 296
LD L+Q L++DP+ R++ +A+ HP+
Sbjct: 385 FLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 155/323 (47%), Gaps = 41/323 (12%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+E L+ +G+G +G+V +A + + VALK R +++ E+ IL L +
Sbjct: 99 YEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVR---NEKRFHRQAAEEIRILEHLRKQDK 155
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
+ + +N R + + FE + +L + I+ + G ++P+ V+ + + + +
Sbjct: 156 DNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPL--VRKFAHSILQCL 213
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMT-LKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
H + I+H DLKP N+L+ ++ + +K+ D G + ++ I + +YRAPEV
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG---SSCYEHQRVYXXIQSRFYRAPEV 270
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSL 244
+LG+ Y +DMWS+ CI AEL+T L PG+ E QL + LLG P +K+
Sbjct: 271 ILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASKRA 329
Query: 245 MNW---HEYPQWN-------------------------PQS--LATAVPNLDKD-GLDLL 273
N+ YP++ P+S A+ D LD L
Sbjct: 330 KNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFL 389
Query: 274 EQMLQYDPSKRISAKKAMEHPYF 296
+Q L++DP+ R++ +A+ HP+
Sbjct: 390 KQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 137/287 (47%), Gaps = 40/287 (13%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD 71
+G+G++G+V + +++ T + A+K T LREV +L+ L P++++L +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH-PNIMKLFE 88
Query: 72 VKQGQNKEGRTVLYLVFE-YMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 130
+ E + Y+V E Y +L I ++ E+ +K Q+ G+ + H
Sbjct: 89 IL-----EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK----QVFSGITYMHK 139
Query: 131 HGILHRDLKPHNLLMD--RKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGS 188
H I+HRDLKP N+L++ K +KI D GL+ F K I T +Y APEVL G+
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPEVLRGT 198
Query: 189 THYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH 248
Y D+WS I L++ T F G +E L ++V G +
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL-----------KRVETGKYAF---- 241
Query: 249 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
+ PQW + D DL+ +ML + PS RI+A + +EHP+
Sbjct: 242 DLPQWR---------TISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 137/287 (47%), Gaps = 40/287 (13%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD 71
+G+G++G+V + +++ T + A+K T LREV +L+ L P++++L +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH-PNIMKLFE 88
Query: 72 VKQGQNKEGRTVLYLVFE-YMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 130
+ E + Y+V E Y +L I ++ E+ +K Q+ G+ + H
Sbjct: 89 IL-----EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK----QVFSGITYMHK 139
Query: 131 HGILHRDLKPHNLLMD--RKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGS 188
H I+HRDLKP N+L++ K +KI D GL+ F K I T +Y APEVL G+
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPEVLRGT 198
Query: 189 THYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH 248
Y D+WS I L++ T F G +E L ++V G +
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL-----------KRVETGKYAF---- 241
Query: 249 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
+ PQW + D DL+ +ML + PS RI+A + +EHP+
Sbjct: 242 DLPQWR---------TISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 137/287 (47%), Gaps = 40/287 (13%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD 71
+G+G++G+V + +++ T + A+K T LREV +L+ L P++++L +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH-PNIMKLFE 88
Query: 72 VKQGQNKEGRTVLYLVFE-YMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 130
+ E + Y+V E Y +L I ++ E+ +K Q+ G+ + H
Sbjct: 89 IL-----EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK----QVFSGITYMHK 139
Query: 131 HGILHRDLKPHNLLMD--RKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGS 188
H I+HRDLKP N+L++ K +KI D GL+ F K I T +Y APEVL G+
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPEVLRGT 198
Query: 189 THYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH 248
Y D+WS I L++ T F G +E L ++V G +
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL-----------KRVETGKYAF---- 241
Query: 249 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
+ PQW + D DL+ +ML + PS RI+A + +EHP+
Sbjct: 242 DLPQWR---------TISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 158/339 (46%), Gaps = 58/339 (17%)
Query: 6 FEKLEKVGEGTYGKVYRARE-KATGKIVALKKTRLHEDDEGVPPTTLREVSILRML-SRD 63
+E ++ +GEG +GKV + KA G+ VA+K + + + E+ +L L + D
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK---NVDRYCEAARSEIQVLEHLNTTD 72
Query: 64 PH-VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRS-----FRQTGENIPVNTVKSL 117
P+ R + + + G + +VFE + +I+ FR ++ ++ +
Sbjct: 73 PNSTFRCVQMLEWFEHHGH--ICIVFELLGLSTYDFIKENGFLPFR-------LDHIRKM 123
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLM---------------DRKTMT---LKIADLGL 159
YQ+CK V F H + + H DLKP N+L D +T+ +K+ D G
Sbjct: 124 AYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGS 183
Query: 160 ARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 219
A T + ++ + T YRAPEV+L + +S D+WS+ CI E +FP
Sbjct: 184 A---TYDDEHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239
Query: 220 LQQLLHIFRLLG-TPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPN----------LDKD 268
+ L + R+LG P + H+ W+ S A + L +D
Sbjct: 240 KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQD 299
Query: 269 G-----LDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKT 302
DL+++ML+YDP+KRI+ ++A++HP+FD L K+
Sbjct: 300 VEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKS 338
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 152/309 (49%), Gaps = 49/309 (15%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATG-----KIVALKKTRLHEDDEGVPPTTLREVSILR 58
D ++ +G+G++G+V ++K TG K+++ ++ + D E + LREV +L+
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL----LREVQLLK 81
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFE-YMDTDLKKYIRSFRQTGENIPVNTVKSL 117
L P++++L + E + YLV E Y +L I S ++ E V+ + +
Sbjct: 82 QLDH-PNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISRKRFSE---VDAAR-I 131
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEIL 175
+ Q+ G+ + H + I+HRDLKP NLL++ K+ ++I D GL+ F KK +I
Sbjct: 132 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIG 190
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
T +Y APEVL G+ Y D+WS I L++ F G +E L +
Sbjct: 191 TAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDIL-----------K 237
Query: 236 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
KV G + E PQW S + DL+ +ML Y PS RISA+ A++H +
Sbjct: 238 KVEKGKYTF----ELPQWKKVSESAK---------DLIRKMLTYVPSMRISARDALDHEW 284
Query: 296 FDDLDKTRL 304
K ++
Sbjct: 285 IQTYTKEQI 293
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 152/309 (49%), Gaps = 49/309 (15%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATG-----KIVALKKTRLHEDDEGVPPTTLREVSILR 58
D ++ +G+G++G+V ++K TG K+++ ++ + D E + LREV +L+
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL----LREVQLLK 104
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFE-YMDTDLKKYIRSFRQTGENIPVNTVKSL 117
L P++++L + E + YLV E Y +L I S ++ E V+ + +
Sbjct: 105 QLDH-PNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISRKRFSE---VDAAR-I 154
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEIL 175
+ Q+ G+ + H + I+HRDLKP NLL++ K+ ++I D GL+ F KK +I
Sbjct: 155 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIG 213
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
T +Y APEVL G+ Y D+WS I L++ F G +E L +
Sbjct: 214 TAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDIL-----------K 260
Query: 236 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
KV G + E PQW S + DL+ +ML Y PS RISA+ A++H +
Sbjct: 261 KVEKGKYTF----ELPQWKKVSESAK---------DLIRKMLTYVPSMRISARDALDHEW 307
Query: 296 FDDLDKTRL 304
K ++
Sbjct: 308 IQTYTKEQI 316
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 152/309 (49%), Gaps = 49/309 (15%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATG-----KIVALKKTRLHEDDEGVPPTTLREVSILR 58
D ++ +G+G++G+V ++K TG K+++ ++ + D E + LREV +L+
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL----LREVQLLK 105
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFE-YMDTDLKKYIRSFRQTGENIPVNTVKSL 117
L P++++L + E + YLV E Y +L I S ++ E V+ + +
Sbjct: 106 QLDH-PNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISRKRFSE---VDAAR-I 155
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEIL 175
+ Q+ G+ + H + I+HRDLKP NLL++ K+ ++I D GL+ F KK +I
Sbjct: 156 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIG 214
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
T +Y APEVL G+ Y D+WS I L++ F G +E L +
Sbjct: 215 TAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDIL-----------K 261
Query: 236 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
KV G + E PQW S + DL+ +ML Y PS RISA+ A++H +
Sbjct: 262 KVEKGKYTF----ELPQWKKVSESAK---------DLIRKMLTYVPSMRISARDALDHEW 308
Query: 296 FDDLDKTRL 304
K ++
Sbjct: 309 IQTYTKEQI 317
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 149/300 (49%), Gaps = 49/300 (16%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATG-----KIVALKKTRLHEDDEGVPPTTLREVSILR 58
D ++ +G+G++G+V ++K TG K+++ ++ + D E + LREV +L+
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL----LREVQLLK 87
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFE-YMDTDLKKYIRSFRQTGENIPVNTVKSL 117
L P++++L + E + YLV E Y +L I S ++ E V+ + +
Sbjct: 88 QLDH-PNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISRKRFSE---VDAAR-I 137
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEIL 175
+ Q+ G+ + H + I+HRDLKP NLL++ K+ ++I D GL+ F KK +I
Sbjct: 138 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIG 196
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
T +Y APEVL G+ Y D+WS I L++ F G +E L +
Sbjct: 197 TAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDIL-----------K 243
Query: 236 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
KV G + E PQW S + DL+ +ML Y PS RISA+ A++H +
Sbjct: 244 KVEKGKYTF----ELPQWKKVSESAK---------DLIRKMLTYVPSMRISARDALDHEW 290
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 141/299 (47%), Gaps = 49/299 (16%)
Query: 12 VGEGTYGKVYRAREKATG-----KIVALKKTRLH-EDDEGVPPTTLREVSILRMLSRDPH 65
+G G V R +ATG KI+ + RL E E V T RE ILR ++ PH
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNT--VKSLMYQLCK 123
++ L+D + E + ++LVF DL + F E + ++ +S+M L +
Sbjct: 162 IITLID-----SYESSSFMFLVF-----DLMRKGELFDYLTEKVALSEKETRSIMRSLLE 211
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
V+F H + I+HRDLKP N+L+D M ++++D G + P +K T Y APE
Sbjct: 212 AVSFLHANNIVHRDLKPENILLD-DNMQIRLSDFGFS-CHLEPGEKLRELCGTPGYLAPE 269
Query: 184 VL---LGSTH--YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
+L + TH Y VD+W+ I L+ + F ++ L I E +
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIM-------EGQY 322
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
S P+W+ +S DL+ ++LQ DP R++A++A++HP+F+
Sbjct: 323 QFSS--------PEWDDRSSTVK---------DLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 157/339 (46%), Gaps = 58/339 (17%)
Query: 6 FEKLEKVGEGTYGKVYRARE-KATGKIVALKKTRLHEDDEGVPPTTLREVSILRML-SRD 63
+E ++ +GEG +GKV + KA G+ VA+K + + + E+ +L L + D
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK---NVDRYCEAARSEIQVLEHLNTTD 72
Query: 64 PH-VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRS-----FRQTGENIPVNTVKSL 117
P+ R + + + G + +VFE + +I+ FR ++ ++ +
Sbjct: 73 PNSTFRCVQMLEWFEHHGH--ICIVFELLGLSTYDFIKENGFLPFR-------LDHIRKM 123
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLM---------------DRKTMT---LKIADLGL 159
YQ+CK V F H + + H DLKP N+L D +T+ +K+ D G
Sbjct: 124 AYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGS 183
Query: 160 ARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 219
A T + ++ + YRAPEV+L + +S D+WS+ CI E +FP
Sbjct: 184 A---TYDDEHHSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239
Query: 220 LQQLLHIFRLLG-TPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPN----------LDKD 268
+ L + R+LG P + H+ W+ S A + L +D
Sbjct: 240 KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQD 299
Query: 269 G-----LDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKT 302
DL+++ML+YDP+KRI+ ++A++HP+FD L K+
Sbjct: 300 VEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKS 338
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 151/312 (48%), Gaps = 49/312 (15%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATG-----KIVALKKTRLHEDDEGVPPTTLREVS 55
+ D ++ +G+G++G+V ++K TG K+++ ++ + D E + LREV
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL----LREVQ 78
Query: 56 ILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFE-YMDTDLKKYIRSFRQTGENIPVNTV 114
+L+ L P++ +L + E + YLV E Y +L I S ++ E V+
Sbjct: 79 LLKQLDH-PNIXKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISRKRFSE---VDAA 129
Query: 115 KSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTH 172
+ ++ Q+ G+ + H + I+HRDLKP NLL++ K+ ++I D GL+ F KK
Sbjct: 130 R-IIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKXKD 187
Query: 173 EILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT 232
+I T +Y APEVL G+ Y D+WS I L++ F G +E L
Sbjct: 188 KIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDIL--------- 236
Query: 233 PNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME 292
+KV G + E PQW S + DL+ + L Y PS RISA+ A++
Sbjct: 237 --KKVEKGKYTF----ELPQWKKVSESAK---------DLIRKXLTYVPSXRISARDALD 281
Query: 293 HPYFDDLDKTRL 304
H + K ++
Sbjct: 282 HEWIQTYTKEQI 293
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 148/326 (45%), Gaps = 46/326 (14%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP---- 64
+ K+G G + V+ A++ VA+K R D+ E+ +L+ ++
Sbjct: 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVR---GDKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 65 ------HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
H+++L+D + G V+ +VFE + +L I+ + G IP+ VK +
Sbjct: 81 DSMGANHILKLLDHFNHKGPNGVHVV-MVFEVLGENLLALIKKYEHRG--IPLIYVKQIS 137
Query: 119 YQLCKGVAFCHGH-GILHRDLKPHNLLMD-----RKTMTLKIADLGLARAFTLPIKKYTH 172
QL G+ + H GI+H D+KP N+LM+ + +KIADLG A + + YT+
Sbjct: 138 KQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD---EHYTN 194
Query: 173 EILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS------ELQQLLHI 226
I T YR+PEVLLG+ + D+WS AC+ EL+T LF D + + I
Sbjct: 195 SIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253
Query: 227 FRLLGT-PNEKVWPGVSS---------LMNWHEYPQWNPQSLATAVPNLDKDGL----DL 272
LLG P+ + G + L N + W + + T KD D
Sbjct: 254 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDF 313
Query: 273 LEQMLQYDPSKRISAKKAMEHPYFDD 298
L MLQ DP KR A + HP+ D
Sbjct: 314 LSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 148/326 (45%), Gaps = 46/326 (14%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP---- 64
+ K+G G + V+ A++ VA+K R D+ E+ +L+ ++
Sbjct: 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVR---GDKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 65 ------HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
H+++L+D + G V+ +VFE + +L I+ + G IP+ VK +
Sbjct: 81 DSMGANHILKLLDHFNHKGPNGVHVV-MVFEVLGENLLALIKKYEHRG--IPLIYVKQIS 137
Query: 119 YQLCKGVAFCHGH-GILHRDLKPHNLLMD-----RKTMTLKIADLGLARAFTLPIKKYTH 172
QL G+ + H GI+H D+KP N+LM+ + +KIADLG A + + YT+
Sbjct: 138 KQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD---EHYTN 194
Query: 173 EILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS------ELQQLLHI 226
I T YR+PEVLLG+ + D+WS AC+ EL+T LF D + + I
Sbjct: 195 SIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253
Query: 227 FRLLGT-PNEKVWPGVSS---------LMNWHEYPQWNPQSLATAVPNLDKDGL----DL 272
LLG P+ + G + L N + W + + T KD D
Sbjct: 254 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDF 313
Query: 273 LEQMLQYDPSKRISAKKAMEHPYFDD 298
L MLQ DP KR A + HP+ D
Sbjct: 314 LSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 148/333 (44%), Gaps = 48/333 (14%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
MD +E +G+G++G+V +A ++ + VA+K + ++ + EV +L ++++
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIK---IIKNKKAFLNQAQIEVRLLELMNK 109
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
++ V ++ R L LVFE + +L +R+ G + +N + Q+C
Sbjct: 110 HDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRG--VSLNLTRKFAQQMC 167
Query: 123 KGVAFCHGH--GILHRDLKPHNLLM-DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY 179
+ F I+H DLKP N+L+ + K +KI D G + ++ I + +Y
Sbjct: 168 TALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLG---QRIYQXIQSRFY 224
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWP 239
R+PEVLLG Y A+DMWS+ CI E+ T LF G +E+ Q+ I +LG P +
Sbjct: 225 RSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD 283
Query: 240 GVSSLMNWHEY---PQWNPQ---------------------SLATAVPNLDKDG------ 269
+ E WN + + T P + G
Sbjct: 284 QAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTV 343
Query: 270 ------LDLLEQMLQYDPSKRISAKKAMEHPYF 296
DL+ +ML YDP RI A++H +F
Sbjct: 344 ADYLKFKDLILRMLDYDPKTRIQPYYALQHSFF 376
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 148/333 (44%), Gaps = 48/333 (14%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
MD +E +G+G++G+V +A ++ + VA+K + ++ + EV +L ++++
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIK---IIKNKKAFLNQAQIEVRLLELMNK 109
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
++ V ++ R L LVFE + +L +R+ G + +N + Q+C
Sbjct: 110 HDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRG--VSLNLTRKFAQQMC 167
Query: 123 KGVAFCHGH--GILHRDLKPHNLLM-DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY 179
+ F I+H DLKP N+L+ + K +KI D G + ++ I + +Y
Sbjct: 168 TALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG---QRIYQXIQSRFY 224
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWP 239
R+PEVLLG Y A+DMWS+ CI E+ T LF G +E+ Q+ I +LG P +
Sbjct: 225 RSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD 283
Query: 240 GVSSLMNWHEY---PQWNPQ---------------------SLATAVPNLDKDG------ 269
+ E WN + + T P + G
Sbjct: 284 QAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTV 343
Query: 270 ------LDLLEQMLQYDPSKRISAKKAMEHPYF 296
DL+ +ML YDP RI A++H +F
Sbjct: 344 ADYLKFKDLILRMLDYDPKTRIQPYYALQHSFF 376
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 139/295 (47%), Gaps = 47/295 (15%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALK----KTRLHEDDEGVPPTTLREVSILRMLS 61
++ ++ +GEG++GKV A TG+ VALK K D +G RE+S LR+L
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG---RIEREISYLRLL- 70
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
R PH+++L DV + +++ + +V EY +L YI + E + Q+
Sbjct: 71 RHPHIIKLYDVIKSKDE-----IIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQI 121
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
V +CH H I+HRDLKP NLL+D + + +KIAD GL+ T T + Y A
Sbjct: 122 ISAVEYCHRHKIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKT-SCGSPNYAA 179
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PEV+ G + VD+WS I ++ + P D E +L + + GV
Sbjct: 180 PEVISGKLYAGPEVDVWSCGVILYVMLCRR--LPFDDESIPVLF---------KNISNGV 228
Query: 242 SSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
+L P+ L+ L+++ML +P RIS + M+ +F
Sbjct: 229 YTL----------PKFLSPGAAG-------LIKRMLIVNPLNRISIHEIMQDDWF 266
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 139/295 (47%), Gaps = 47/295 (15%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALK----KTRLHEDDEGVPPTTLREVSILRMLS 61
++ ++ +GEG++GKV A TG+ VALK K D +G RE+S LR+L
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG---RIEREISYLRLL- 71
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
R PH+++L DV + +++ + +V EY +L YI + E + Q+
Sbjct: 72 RHPHIIKLYDVIKSKDE-----IIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQI 122
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
V +CH H I+HRDLKP NLL+D + + +KIAD GL+ T T + Y A
Sbjct: 123 ISAVEYCHRHKIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKT-SCGSPNYAA 180
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PEV+ G + VD+WS I ++ + P D E +L + + GV
Sbjct: 181 PEVISGKLYAGPEVDVWSCGVILYVMLCRR--LPFDDESIPVLF---------KNISNGV 229
Query: 242 SSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
+L P+ L+ L+++ML +P RIS + M+ +F
Sbjct: 230 YTL----------PKFLSPGAAG-------LIKRMLIVNPLNRISIHEIMQDDWF 267
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 139/295 (47%), Gaps = 47/295 (15%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALK----KTRLHEDDEGVPPTTLREVSILRMLS 61
++ ++ +GEG++GKV A TG+ VALK K D +G RE+S LR+L
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG---RIEREISYLRLL- 65
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
R PH+++L DV + +++ + +V EY +L YI + E + Q+
Sbjct: 66 RHPHIIKLYDVIKSKDE-----IIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQI 116
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
V +CH H I+HRDLKP NLL+D + + +KIAD GL+ T T + Y A
Sbjct: 117 ISAVEYCHRHKIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKT-SCGSPNYAA 174
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PEV+ G + VD+WS I ++ + P D E +L + + GV
Sbjct: 175 PEVISGKLYAGPEVDVWSCGVILYVMLCRR--LPFDDESIPVLF---------KNISNGV 223
Query: 242 SSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
+L P+ L+ L+++ML +P RIS + M+ +F
Sbjct: 224 YTL----------PKFLSPGAAG-------LIKRMLIVNPLNRISIHEIMQDDWF 261
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 148/333 (44%), Gaps = 48/333 (14%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
MD +E +G+G++G+V +A ++ + VA+K + ++ + EV +L ++++
Sbjct: 34 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIK---IIKNKKAFLNQAQIEVRLLELMNK 90
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
++ V ++ R L LVFE + +L +R+ G + +N + Q+C
Sbjct: 91 HDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRG--VSLNLTRKFAQQMC 148
Query: 123 KGVAFCHGH--GILHRDLKPHNLLM-DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY 179
+ F I+H DLKP N+L+ + K +KI D G + ++ I + +Y
Sbjct: 149 TALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG---QRIYQXIQSRFY 205
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWP 239
R+PEVLLG Y A+DMWS+ CI E+ T LF G +E+ Q+ I +LG P +
Sbjct: 206 RSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD 264
Query: 240 GVSSLMNWHEY---PQWNPQ---------------------SLATAVPNLDKDG------ 269
+ E WN + + T P + G
Sbjct: 265 QAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTV 324
Query: 270 ------LDLLEQMLQYDPSKRISAKKAMEHPYF 296
DL+ +ML YDP RI A++H +F
Sbjct: 325 ADYLKFKDLILRMLDYDPKTRIQPYYALQHSFF 357
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 139/295 (47%), Gaps = 47/295 (15%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALK----KTRLHEDDEGVPPTTLREVSILRMLS 61
++ ++ +GEG++GKV A TG+ VALK K D +G RE+S LR+L
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG---RIEREISYLRLL- 61
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
R PH+++L DV + +++ + +V EY +L YI + E + Q+
Sbjct: 62 RHPHIIKLYDVIKSKDE-----IIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQI 112
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
V +CH H I+HRDLKP NLL+D + + +KIAD GL+ T T + Y A
Sbjct: 113 ISAVEYCHRHKIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKT-SCGSPNYAA 170
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PEV+ G + VD+WS I ++ + P D E +L + + GV
Sbjct: 171 PEVISGKLYAGPEVDVWSCGVILYVMLCRR--LPFDDESIPVLF---------KNISNGV 219
Query: 242 SSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
+L P+ L+ L+++ML +P RIS + M+ +F
Sbjct: 220 YTL----------PKFLSPGAAG-------LIKRMLIVNPLNRISIHEIMQDDWF 257
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 143/301 (47%), Gaps = 49/301 (16%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT-----LREVSILR 58
D +++++K+G G YG+V ++K TG A+K + V T+ L EV++L+
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIK----KSSVTTTSNSGALLDEVAVLK 59
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFE-YMDTDLKKYIRSFRQTGENIPVNTVKSL 117
L P++++L + E + YLV E Y +L I RQ + +
Sbjct: 60 QLDH-PNIMKLYEFF-----EDKRNYYLVMEVYRGGELFDEI-ILRQKFSEVDAAVI--- 109
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEIL 175
M Q+ G + H H I+HRDLKP NLL++ K+ +KI D GL+ F + K +
Sbjct: 110 MKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKERLG 168
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
T +Y APEVL Y D+WS I L+ F G ++ Q++L +
Sbjct: 169 TAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQTD-QEIL----------K 215
Query: 236 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
+V G S + P W S + L++ ML Y+PSKRISA++A+ HP+
Sbjct: 216 RVEKGKFSF----DPPDWTQVS---------DEAKQLVKLMLTYEPSKRISAEEALNHPW 262
Query: 296 F 296
Sbjct: 263 I 263
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 143/301 (47%), Gaps = 49/301 (16%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT-----LREVSILR 58
D +++++K+G G YG+V ++K TG A+K + V T+ L EV++L+
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIK----KSSVTTTSNSGALLDEVAVLK 76
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFE-YMDTDLKKYIRSFRQTGENIPVNTVKSL 117
L P++++L + E + YLV E Y +L I RQ + +
Sbjct: 77 QLDH-PNIMKLYEFF-----EDKRNYYLVMEVYRGGELFDEI-ILRQKFSEVDAAVI--- 126
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEIL 175
M Q+ G + H H I+HRDLKP NLL++ K+ +KI D GL+ F + K +
Sbjct: 127 MKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKERLG 185
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
T +Y APEVL Y D+WS I L+ F G ++ Q++L +
Sbjct: 186 TAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQTD-QEIL----------K 232
Query: 236 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
+V G S + P W + + L++ ML Y+PSKRISA++A+ HP+
Sbjct: 233 RVEKGKFSF----DPPDWT---------QVSDEAKQLVKLMLTYEPSKRISAEEALNHPW 279
Query: 296 F 296
Sbjct: 280 I 280
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 136/300 (45%), Gaps = 53/300 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
+G+G++ VYRA TG VA+K K +++ G+ EV I L + P ++
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK--AGMVQRVQNEVKIHCQL-KHPSILE 75
Query: 69 LMDVKQGQNKEGRTVLYLVFEY-----MDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
L + + N +YLV E M+ LK ++ F + N + M+Q+
Sbjct: 76 LYNYFEDSN-----YVYLVLEMCHNGEMNRYLKNRVKPFSE-------NEARHFMHQIIT 123
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
G+ + H HGILHRDL NLL+ R M +KIAD GLA +P +K+ T Y +PE
Sbjct: 124 GMLYLHSHGILHRDLTLSNLLLTR-NMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPE 182
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS 243
+ S H D+WS+ C+F L+ F D+ + T N+ V
Sbjct: 183 IATRSAH-GLESDVWSLGCMFYTLLIGRPPFDTDT----------VKNTLNKVVLAD--- 228
Query: 244 LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKTR 303
+E P + L + DL+ Q+L+ +P+ R+S ++HP+ T+
Sbjct: 229 ----YEMPSF-----------LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTK 273
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 135/296 (45%), Gaps = 56/296 (18%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
+ +G GT+GKV + + TG VA+K + ++ D V RE+ L++ R PH+
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLD--VVGKIRREIQNLKLF-RHPHI 78
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++L V + +++V EY+ +L YI + E + L Q+ GV
Sbjct: 79 IKLYQVISTPSD-----IFMVMEYVSGGELFDYICKNGRLDEK----ESRRLFQQILSGV 129
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-----TLWYR 180
+CH H ++HRDLKP N+L+D M KIAD GL+ + E L + Y
Sbjct: 130 DYCHRHMVVHRDLKPENVLLD-AHMNAKIADFGLSNMMS------DGEFLRXSCGSPNYA 182
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APEV+ G + VD+WS I L+ T F D H+ L +K+ G
Sbjct: 183 APEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD-------HVPTLF----KKICDG 231
Query: 241 VSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
+ + PQ L +V + LL+ MLQ DP KR + K EH +F
Sbjct: 232 IF----------YTPQYLNPSV-------ISLLKHMLQVDPMKRATIKDIREHEWF 270
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 145/304 (47%), Gaps = 51/304 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK--------KTRLHEDDEGVP---PTT 50
+ +++ K+ K+G G YG+V +EK A+K K R +D++ +
Sbjct: 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEI 93
Query: 51 LREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENI 109
E+S+L+ L P++++L DV E + YLV E+ + +L + I + + E
Sbjct: 94 YNEISLLKSLDH-PNIIKLFDVF-----EDKKYFYLVTEFYEGGELFEQIINRHKFDECD 147
Query: 110 PVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPI 167
N +M Q+ G+ + H H I+HRD+KP N+L++ K + +KI D GL+ F+
Sbjct: 148 AAN----IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY 203
Query: 168 KKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIF 227
K + T +Y APEVL Y+ D+WS I L+ F G ++ Q ++
Sbjct: 204 -KLRDRLGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQND-QDII--- 256
Query: 228 RLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISA 287
+KV G + ++ W N+ + +L++ ML YD +KR +A
Sbjct: 257 -------KKVEKGKY----YFDFNDW---------KNISDEAKELIKLMLTYDYNKRCTA 296
Query: 288 KKAM 291
++A+
Sbjct: 297 EEAL 300
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 135/304 (44%), Gaps = 38/304 (12%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHE--DDEGVPPTTL-REVSILRML 60
D +E E +G+G + V R + TG+ A+K + + G+ L RE SI ML
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY 119
+ PH+V L++ +LY+VFE+MD DL I G M
Sbjct: 84 -KHPHIVELLETYSSDG-----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLMDRK--TMTLKIADLGLARAFTLPIKKYTHEILTL 177
Q+ + + +CH + I+HRD+KP N+L+ K + +K+ D G+A + T
Sbjct: 138 QILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTP 197
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 237
+ APEV + Y VD+W I L++ F G E +F + K+
Sbjct: 198 HFMAPEV-VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFEGIIKGKYKM 251
Query: 238 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
P QW+ ++ + DL+ +ML DP++RI+ +A+ HP+
Sbjct: 252 NP-----------RQWS---------HISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
Query: 298 DLDK 301
+ D+
Sbjct: 292 ERDR 295
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 113/218 (51%), Gaps = 27/218 (12%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTL----REVSILRMLS 61
L+ +G+G + KV AR TG+ VA+K KT+L+ PT+L REV I+++L+
Sbjct: 17 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-------PTSLQKLFREVRIMKILN 69
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQ 120
P++V+L +V E LYL+ EY ++ Y+ + + E +S Q
Sbjct: 70 H-PNIVKLFEVI-----ETEKTLYLIMEYASGGEVFDYLVAHGRMKEK----EARSKFRQ 119
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ V +CH I+HRDLK NLL+D M +KIAD G + FT+ K T + Y
Sbjct: 120 IVSAVQYCHQKRIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTVGGKLDTF-CGSPPYA 177
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 218
APE+ G + VD+WS+ I LV+ + F G +
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 143/294 (48%), Gaps = 41/294 (13%)
Query: 8 KLEKVGEGTYGKVYRAREKATGKIVALK--KTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
K E +G G +G+V++ E ATG +A K KTR +D E V E+S++ L +
Sbjct: 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVK----NEISVMNQLDH-AN 147
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
+++L D + +N + LV EY+D + + R ++ ++T+ M Q+C+G+
Sbjct: 148 LIQLYDAFESKND-----IVLVMEYVDGG-ELFDRIIDESYNLTELDTI-LFMKQICEGI 200
Query: 126 AFCHGHGILHRDLKPHNLL-MDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
H ILH DLKP N+L ++R +KI D GLAR + P +K T + APEV
Sbjct: 201 RHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYK-PREKLKVNFGTPEFLAPEV 259
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSL 244
+ S DMWSV I L++ + F GD++ + L +I
Sbjct: 260 -VNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILAC--------------- 303
Query: 245 MNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDD 298
+W+ + ++ ++ + + ++L + S RISA +A++HP+ D
Sbjct: 304 -------RWDLED--EEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSD 348
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 136/296 (45%), Gaps = 55/296 (18%)
Query: 10 EKVGEGTYGKV-----YRAREKATGKIVA---LKKTRLHEDDEGVPPTTLREVSILRMLS 61
E +GEG++GKV Y+ ++K K ++ LKK+ +H E RE+S L++L
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVE-------REISYLKLL- 66
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
R PH+++L DV T + +V EY +L YI ++ E+ + Q+
Sbjct: 67 RHPHIIKLYDVITTP-----TDIVMVIEYAGGELFDYIVEKKRMTED----EGRRFFQQI 117
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
+ +CH H I+HRDLKP NLL+D + +KIAD GL+ T T + Y A
Sbjct: 118 ICAIEYCHRHKIVHRDLKPENLLLD-DNLNVKIADFGLSNIMTDGNFLKT-SCGSPNYAA 175
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PEV+ G + VD+WS C V P D E PN ++ V
Sbjct: 176 PEVINGKLYAGPEVDVWS--CGIVLYVMLVGRLPFDDEF-----------IPN--LFKKV 220
Query: 242 SSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+S + + P + L L+ +M+ DP +RI+ ++ P+F+
Sbjct: 221 NSCV--YVMPDF-----------LSPGAQSLIRRMIVADPMQRITIQEIRRDPWFN 263
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 141/304 (46%), Gaps = 48/304 (15%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTR----LHEDDEGVPPTTLREVSILR 58
++ FE + +G+G++GKV+ A K T + A+K + L +DD T+ E +L
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD---VECTMVEKRVLS 73
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSL 117
+ P + + Q + L+ V EY++ DL +I Q+ ++
Sbjct: 74 LAWEHPFLTHMFCTFQTKEN-----LFFVMEYLNGGDLMYHI----QSCHKFDLSRATFY 124
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 177
++ G+ F H GI++RDLK N+L+D K +KIAD G+ + L K T
Sbjct: 125 AAEIILGLQFLHSKGIVYRDLKLDNILLD-KDGHIKIADFGMCKENMLGDAKTNEFCGTP 183
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 237
Y APE+LLG Y+ +VD WS + E++ + F G E ++L H R
Sbjct: 184 DYIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDE-EELFHSIR--------- 232
Query: 238 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAM-EHPYF 296
M+ YP+W L+K+ DLL ++ +P KR+ + + +HP F
Sbjct: 233 -------MDNPFYPRW-----------LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLF 274
Query: 297 DDLD 300
+++
Sbjct: 275 REIN 278
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 139/300 (46%), Gaps = 45/300 (15%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRL-HEDDEGVPPTTLREVSILRML 60
V+D ++ E++G G +G V+R E+ATG A K HE D+ T +E+ + +L
Sbjct: 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK---ETVRKEIQTMSVL 211
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTD--LKKYIRSFRQTGENIPVNTVKSLM 118
R P +V L D + N+ + +++E+M +K + E+ V M
Sbjct: 212 -RHPTLVNLHDAFEDDNE-----MVMIYEFMSGGELFEKVADEHNKMSEDEAV----EYM 261
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLM-DRKTMTLKIADLGLARAFTLPIKKYTHEILTL 177
Q+CKG+ H + +H DLKP N++ +++ LK+ D GL A P + T
Sbjct: 262 RQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT-AHLDPKQSVKVTTGTA 320
Query: 178 WYRAPEVLLGS-THYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEK 236
+ APEV G Y T DMWSV + L++ + F G+++ + L ++
Sbjct: 321 EFAAPEVAEGKPVGYYT--DMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC------- 371
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
WN +A + +DG D + ++L DP+ R++ +A+EHP+
Sbjct: 372 ---------------DWNMDD--SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 111/218 (50%), Gaps = 27/218 (12%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTL----REVSILRMLS 61
L+ +G+G + KV AR TG+ VA+K KT+L+ PT+L REV I+++L+
Sbjct: 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-------PTSLQKLFREVRIMKILN 72
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQ 120
P++V+L +V E LYL+ EY ++ Y+ + + E +S Q
Sbjct: 73 H-PNIVKLFEVI-----ETEKTLYLIMEYASGGEVFDYLVAHGRMKEK----EARSKFRQ 122
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ V +CH I+HRDLK NLL+D M +KIAD G + FT+ K Y
Sbjct: 123 IVSAVQYCHQKRIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTVG-GKLDAFCGAPPYA 180
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 218
APE+ G + VD+WS+ I LV+ + F G +
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 139/300 (46%), Gaps = 45/300 (15%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRL-HEDDEGVPPTTLREVSILRML 60
V+D ++ E++G G +G V+R E+ATG A K HE D+ T +E+ + +L
Sbjct: 49 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK---ETVRKEIQTMSVL 105
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTD--LKKYIRSFRQTGENIPVNTVKSLM 118
R P +V L D + N+ + +++E+M +K + E+ V M
Sbjct: 106 -RHPTLVNLHDAFEDDNE-----MVMIYEFMSGGELFEKVADEHNKMSEDEAV----EYM 155
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLM-DRKTMTLKIADLGLARAFTLPIKKYTHEILTL 177
Q+CKG+ H + +H DLKP N++ +++ LK+ D GL A P + T
Sbjct: 156 RQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT-AHLDPKQSVKVTTGTA 214
Query: 178 WYRAPEVLLGS-THYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEK 236
+ APEV G Y T DMWSV + L++ + F G+++ + L ++
Sbjct: 215 EFAAPEVAEGKPVGYYT--DMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC------- 265
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
WN +A + +DG D + ++L DP+ R++ +A+EHP+
Sbjct: 266 ---------------DWNMDD--SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 111/215 (51%), Gaps = 27/215 (12%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTL----REVSILRMLSRDP 64
+G+G + KV AR TG+ VA+K KT+L+ PT+L REV I+++L+ P
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLN-------PTSLQKLFREVRIMKILNH-P 74
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
++V+L +V E LYLV EY ++ Y+ + + E ++ Q+
Sbjct: 75 NIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEK----EARAKFRQIVS 125
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
V +CH I+HRDLK NLL+D M +KIAD G + FT+ K T + Y APE
Sbjct: 126 AVQYCHQKYIVHRDLKAENLLLD-GDMNIKIADFGFSNEFTVGNKLDTF-CGSPPYAAPE 183
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 218
+ G + VD+WS+ I LV+ + F G +
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
L+ +G+G + KV AR TGK VA+K + + REV I+++L+ P++V+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH-PNIVK 77
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAF 127
L +V E LYLV EY ++ Y+ + + E ++ Q+ V +
Sbjct: 78 LFEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEK----EARAKFRQIVSAVQY 128
Query: 128 CHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLG 187
CH I+HRDLK NLL+D M +KIAD G + FT K T + Y APE+ G
Sbjct: 129 CHQKFIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQG 186
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDS 218
+ VD+WS+ I LV+ + F G +
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
L+ +G+G + KV AR TGK VA+K + + REV I+++L+ P++V+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH-PNIVK 77
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAF 127
L +V E LYLV EY ++ Y+ + + E ++ Q+ V +
Sbjct: 78 LFEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEK----EARAKFRQIVSAVQY 128
Query: 128 CHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLG 187
CH I+HRDLK NLL+D M +KIAD G + FT K T + Y APE+ G
Sbjct: 129 CHQKFIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQG 186
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDS 218
+ VD+WS+ I LV+ + F G +
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 134/302 (44%), Gaps = 52/302 (17%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ +E E +G G + KV A TG++VA+K K L D P E+ L+
Sbjct: 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSD----LPRIKTEIEALK 63
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSL 117
L R H+ +L V + NK +++V EY +L YI S + E + +
Sbjct: 64 NL-RHQHICQLYHVLETANK-----IFMVLEYCPGGELFDYIISQDRLSEE----ETRVV 113
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-- 175
Q+ VA+ H G HRDLKP NLL D + LK+ D GL A K Y +
Sbjct: 114 FRQIVSAVAYVHSQGYAHRDLKPENLLFD-EYHKLKLIDFGLC-AKPKGNKDYHLQTCCG 171
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
+L Y APE++ G ++ + D+WS+ + L+ F D+ + I R
Sbjct: 172 SLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMR------- 224
Query: 236 KVWPGVSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
++ P+W +P S+ LL+QMLQ DP KRIS K + HP
Sbjct: 225 ----------GKYDVPKWLSPSSIL------------LLQQMLQVDPKKRISMKNLLNHP 262
Query: 295 YF 296
+
Sbjct: 263 WI 264
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 134/304 (44%), Gaps = 38/304 (12%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHE--DDEGVPPTTL-REVSILRML 60
D +E E +G+G + V R + TG+ A+K + + G+ L RE SI ML
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY 119
+ PH+V L++ +LY+VFE+MD DL I G M
Sbjct: 86 -KHPHIVELLETYSSDG-----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 139
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLMDRK--TMTLKIADLGLARAFTLPIKKYTHEILTL 177
Q+ + + +CH + I+HRD+KPH +L+ K + +K+ G+A + T
Sbjct: 140 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP 199
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 237
+ APEV + Y VD+W I L++ F G E +F + K+
Sbjct: 200 HFMAPEV-VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFEGIIKGKYKM 253
Query: 238 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
P QW+ ++ + DL+ +ML DP++RI+ +A+ HP+
Sbjct: 254 NP-----------RQWS---------HISESAKDLVRRMLMLDPAERITVYEALNHPWLK 293
Query: 298 DLDK 301
+ D+
Sbjct: 294 ERDR 297
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 136/293 (46%), Gaps = 41/293 (13%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
+ F+ LEK+GEG+YG VY+A K TG+IVA+K+ + D + + ++E+SI++
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEI----IKEISIMQQCD-S 83
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
PHVV+ + T L++V EY I R + + + + +++ K
Sbjct: 84 PHVVKYYG-----SYFKNTDLWIVMEYCGAGSVSDIIRLR--NKTLTEDEIATILQSTLK 136
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
G+ + H +HRD+K N+L++ + K+AD G+A T + K I T ++ APE
Sbjct: 137 GLEYLHFMRKIHRDIKAGNILLNTEGHA-KLADFGVAGQLTDXMAKRNXVIGTPFWMAPE 195
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS 243
V + Y+ D+WS+ E+ P +++ + IF + P
Sbjct: 196 V-IQEIGYNCVADIWSLGITAIEMAEGK---PPYADIHPMRAIFMIPTNP---------- 241
Query: 244 LMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P + P L D D ++Q L P +R +A + ++HP+
Sbjct: 242 -----------PPTFRK--PELWSDNFTDFVKQCLVKSPEQRATATQLLQHPF 281
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 134/296 (45%), Gaps = 56/296 (18%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
+ +G GT+GKV + TG VA+K + ++ D V RE+ L++ R PH+
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLD--VVGKIKREIQNLKLF-RHPHI 73
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++L V T ++V EY+ +L YI + E + L Q+ V
Sbjct: 74 IKLYQVISTP-----TDFFMVMEYVSGGELFDYICKHGRVEEM----EARRLFQQILSAV 124
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-----TLWYR 180
+CH H ++HRDLKP N+L+D M KIAD GL+ + E L + Y
Sbjct: 125 DYCHRHMVVHRDLKPENVLLD-AHMNAKIADFGLSNMMS------DGEFLRDSCGSPNYA 177
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APEV+ G + VD+WS I L+ T P D E H+ L +K+ G
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCGT--LPFDDE-----HVPTLF----KKIRGG 226
Query: 241 VSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
V + P++ +S+AT LL MLQ DP KR + K EH +F
Sbjct: 227 VFYI------PEYLNRSVAT-----------LLMHMLQVDPLKRATIKDIREHEWF 265
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 10/214 (4%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHE-DDEGVPPTTLREVSILRMLSRDP 64
F +K+G G + +VYRA G VALKK ++ + D ++E+ +L+ L+ P
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH-P 92
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
+V++ N+ L +V E D DL + I+ F++ IP TV QLC
Sbjct: 93 NVIKYYASFIEDNE-----LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS 147
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ H ++HRD+KP N+ + T +K+ DLGL R F+ + T +Y +PE
Sbjct: 148 ALEHMHSRRVMHRDIKPANVFI-TATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 206
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVTKTALFPGD 217
+ Y+ D+WS+ C+ E+ + F GD
Sbjct: 207 -RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 239
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 106/223 (47%), Gaps = 15/223 (6%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+E L +G G+YG+ + R K+ GKI+ K+ E + EV++LR L + P+
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPN 66
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
+VR D + T LY+V EY + DL I + + + V +M QL
Sbjct: 67 IVRYYDRIIDRTN---TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 125 VAFCH-----GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY 179
+ CH GH +LHRDLKP N+ +D K +K+ D GLAR + T +Y
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKAFVGTPYY 182
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQ 222
+PE + Y+ D+WS+ C+ EL AL P + Q
Sbjct: 183 MSPEQ-MNRMSYNEKSDIWSLGCLLYELC---ALMPPFTAFSQ 221
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 134/304 (44%), Gaps = 38/304 (12%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHE--DDEGVPPTTL-REVSILRML 60
D +E E +G+G + V R + TG+ A+K + + G+ L RE SI ML
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY 119
+ PH+V L++ +LY+VFE+MD DL I G M
Sbjct: 84 -KHPHIVELLETYSSDG-----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLMDRK--TMTLKIADLGLARAFTLPIKKYTHEILTL 177
Q+ + + +CH + I+HRD+KPH +L+ K + +K+ G+A + T
Sbjct: 138 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP 197
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 237
+ APEV + Y VD+W I L++ F G E +F + K+
Sbjct: 198 HFMAPEV-VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFEGIIKGKYKM 251
Query: 238 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
P QW+ ++ + DL+ +ML DP++RI+ +A+ HP+
Sbjct: 252 NPR-----------QWS---------HISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
Query: 298 DLDK 301
+ D+
Sbjct: 292 ERDR 295
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 134/296 (45%), Gaps = 56/296 (18%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
+ +G GT+GKV + TG VA+K + ++ D V RE+ L++ R PH+
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLD--VVGKIKREIQNLKLF-RHPHI 73
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
++L V T ++V EY+ +L YI + E + L Q+ V
Sbjct: 74 IKLYQVISTP-----TDFFMVMEYVSGGELFDYICKHGRVEEM----EARRLFQQILSAV 124
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-----TLWYR 180
+CH H ++HRDLKP N+L+D M KIAD GL+ + E L + Y
Sbjct: 125 DYCHRHMVVHRDLKPENVLLD-AHMNAKIADFGLSNMMS------DGEFLRTSCGSPNYA 177
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APEV+ G + VD+WS I L+ T P D E H+ L +K+ G
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCGT--LPFDDE-----HVPTLF----KKIRGG 226
Query: 241 VSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
V + P++ +S+AT LL MLQ DP KR + K EH +F
Sbjct: 227 VFYI------PEYLNRSVAT-----------LLMHMLQVDPLKRATIKDIREHEWF 265
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 106/223 (47%), Gaps = 15/223 (6%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+E L +G G+YG+ + R K+ GKI+ K+ E + EV++LR L + P+
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPN 66
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
+VR D + T LY+V EY + DL I + + + V +M QL
Sbjct: 67 IVRYYDRIIDRTN---TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 125 VAFCH-----GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY 179
+ CH GH +LHRDLKP N+ +D K +K+ D GLAR + T +Y
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKTFVGTPYY 182
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQ 222
+PE + Y+ D+WS+ C+ EL AL P + Q
Sbjct: 183 MSPEQ-MNRMSYNEKSDIWSLGCLLYELC---ALMPPFTAFSQ 221
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
L+ +G+G + KV AR TGK VA++ + + REV I+++L+ P++V+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNH-PNIVK 77
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAF 127
L +V E LYLV EY ++ Y+ + + E ++ Q+ V +
Sbjct: 78 LFEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEK----EARAKFRQIVSAVQY 128
Query: 128 CHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLG 187
CH I+HRDLK NLL+D M +KIAD G + FT K T + Y APE+ G
Sbjct: 129 CHQKFIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQG 186
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDS 218
+ VD+WS+ I LV+ + F G +
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 133/304 (43%), Gaps = 58/304 (19%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSIL 57
+D F+ + +G+G +G VY AREK I+ALK K++L + EGV RE+ I
Sbjct: 11 FTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL--EKEGVEHQLRREIEIQ 68
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEY-----MDTDLKKYIRSFRQTGENIPVN 112
L R P+++R+ + + + +YL+ E+ + +L+K+ R Q
Sbjct: 69 SHL-RHPNILRMYNYFHDRKR-----IYLMLEFAPRGELYKELQKHGRFDEQRS------ 116
Query: 113 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTH 172
+ M +L + +CH ++HRD+KP NLLM K LKIAD G + P +
Sbjct: 117 --ATFMEELADALHYCHERKVIHRDIKPENLLMGYKG-ELKIADFGW--SVHAPSLRRRX 171
Query: 173 EILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL-LG 231
TL Y PE++ G TH VD+W + E + F S + I + L
Sbjct: 172 MCGTLDYLPPEMIEGKTH-DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK 230
Query: 232 TPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAM 291
P P L DL+ ++L+Y P +R+ K M
Sbjct: 231 FP-----------------------------PFLSDGSKDLISKLLRYHPPQRLPLKGVM 261
Query: 292 EHPY 295
EHP+
Sbjct: 262 EHPW 265
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
L+ +G+G + KV AR TGK VA++ + + REV I+++L+ P++V+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNH-PNIVK 77
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAF 127
L +V E LYLV EY ++ Y+ + + E ++ Q+ V +
Sbjct: 78 LFEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEK----EARAKFRQIVSAVQY 128
Query: 128 CHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLG 187
CH I+HRDLK NLL+D M +KIAD G + FT K + Y APE+ G
Sbjct: 129 CHQKFIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTFG-NKLDEFCGSPPYAAPELFQG 186
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDS 218
+ VD+WS+ I LV+ + F G +
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 136/295 (46%), Gaps = 48/295 (16%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTR----LHEDDEGVPPTTLREVSILRMLSRDPHVV 67
+G+G++GKV+ A K T + A+K + L +DD T+ E +L + P +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD---VECTMVEKRVLSLAWEHPFLT 81
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
+ Q + L+ V EY++ DL +I Q+ ++ ++ G+
Sbjct: 82 HMFCTFQTKEN-----LFFVMEYLNGGDLMYHI----QSCHKFDLSRATFYAAEIILGLQ 132
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLL 186
F H GI++RDLK N+L+D K +KIAD G+ + L K T Y APE+LL
Sbjct: 133 FLHSKGIVYRDLKLDNILLD-KDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILL 191
Query: 187 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 246
G Y+ +VD WS + E++ + F G E ++L H R M+
Sbjct: 192 GQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDE-EELFHSIR----------------MD 233
Query: 247 WHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAM-EHPYFDDLD 300
YP+W L+K+ DLL ++ +P KR+ + + +HP F +++
Sbjct: 234 NPFYPRW-----------LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 277
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 13/211 (6%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
L+ +G+G + KV AR TGK VA+K + + REV I+++L+ P++V+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH-PNIVK 77
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAF 127
L +V E LYLV EY ++ Y+ + + E ++ Q+ V +
Sbjct: 78 LFEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEK----EARAKFRQIVSAVQY 128
Query: 128 CHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLG 187
CH I+HRDLK NLL+D M +KIAD G + FT K Y APE+ G
Sbjct: 129 CHQKFIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTFG-NKLDAFCGAPPYAAPELFQG 186
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDS 218
+ VD+WS+ I LV+ + F G +
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
L+ +G+G + KV AR TGK VA+K + + REV I+++L+ P++V+
Sbjct: 12 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH-PNIVK 70
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAF 127
L +V E LYLV EY ++ Y+ + E ++ Q+ V +
Sbjct: 71 LFEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGWMKEK----EARAKFRQIVSAVQY 121
Query: 128 CHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLG 187
CH I+HRDLK NLL+D M +KIAD G + FT K T + Y APE+ G
Sbjct: 122 CHQKFIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQG 179
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDS 218
+ VD+WS+ I LV+ + F G +
Sbjct: 180 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 210
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 106/223 (47%), Gaps = 15/223 (6%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+E L +G G+YG+ + R K+ GKI+ K+ E + EV++LR L + P+
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPN 66
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
+VR D + T LY+V EY + DL I + + + V +M QL
Sbjct: 67 IVRYYDRIIDRTN---TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 125 VAFCH-----GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY 179
+ CH GH +LHRDLKP N+ +D K +K+ D GLAR + T +Y
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDEDFAKEFVGTPYY 182
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQ 222
+PE + Y+ D+WS+ C+ EL AL P + Q
Sbjct: 183 MSPEQ-MNRMSYNEKSDIWSLGCLLYELC---ALMPPFTAFSQ 221
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 151/341 (44%), Gaps = 66/341 (19%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRARE-KATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
+ + +E + +GEGT+G+V + + + G VALK + + E E+++L +
Sbjct: 31 LQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIK---NVEKYKEAARLEINVLEKI 87
Query: 61 S-RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKY----IRSFRQTGEN----IPV 111
+ +DP NK ++ F+Y + + +F +N P+
Sbjct: 88 NEKDP-----------DNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 136
Query: 112 NTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM------------------DRKTMTLK 153
+ V+ + +QLC+ V F H + + H DLKP N+L K+ ++
Sbjct: 137 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVR 196
Query: 154 IADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL 213
+ D G A T + ++ + T YRAPEV+L +S D+WS+ CI E L
Sbjct: 197 VVDFGSA---TFDHEHHSTIVSTRHYRAPEVIL-ELGWSQPCDVWSIGCIIFEYYVGFTL 252
Query: 214 FPGDSELQQLLHIFRLLG---------TPNEKVWPGVSSLMNWHE------YPQWNPQSL 258
F + L + R+LG T +K + ++W E Y + N + L
Sbjct: 253 FQTHDNREHLAMMERILGPIPSRMIRKTRKQKYF--YRGRLDWDENTSAGRYVRENCKPL 310
Query: 259 A---TAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
T+ DL+E ML+Y+P+KR++ +A++HP+F
Sbjct: 311 RRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFF 351
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 152/337 (45%), Gaps = 52/337 (15%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKI-VALKKTRLHEDDEGVPPTTLR-EVSILRM 59
+ + +E + +GEGT+GKV + A GK VALK R + G R E+++L+
Sbjct: 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIR----NVGKYREAARLEINVLKK 72
Query: 60 LSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY 119
+ + + V + + FE + + ++++ + P+ V+ + Y
Sbjct: 73 IKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKE--NNFQPYPLPHVRHMAY 130
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLM------------------DRKTMTLKIADLGLAR 161
QLC + F H + + H DLKP N+L K ++++AD G A
Sbjct: 131 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA- 189
Query: 162 AFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T + +T + T YR PEV+L ++ D+WS+ CI E LF +
Sbjct: 190 --TFDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246
Query: 222 QLLHIFRLLG---------TPNEK-------VWPGVSSLMNWHEYPQWNPQSLATAV--P 263
L+ + ++LG T +K VW SS Y + N + L + +
Sbjct: 247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDG---RYVKENCKPLKSYMLQD 303
Query: 264 NLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+L+ L DL+ +ML++DP++RI+ +A+ HP+F L
Sbjct: 304 SLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 340
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 152/337 (45%), Gaps = 52/337 (15%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKI-VALKKTRLHEDDEGVPPTTLR-EVSILRM 59
+ + +E + +GEGT+GKV + A GK VALK R + G R E+++L+
Sbjct: 26 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIR----NVGKYREAARLEINVLKK 81
Query: 60 LSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY 119
+ + + V + + FE + + ++++ + P+ V+ + Y
Sbjct: 82 IKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKE--NNFQPYPLPHVRHMAY 139
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLM------------------DRKTMTLKIADLGLAR 161
QLC + F H + + H DLKP N+L K ++++AD G A
Sbjct: 140 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA- 198
Query: 162 AFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T + +T + T YR PEV+L ++ D+WS+ CI E LF +
Sbjct: 199 --TFDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 255
Query: 222 QLLHIFRLLG---------TPNEK-------VWPGVSSLMNWHEYPQWNPQSLATAV--P 263
L+ + ++LG T +K VW SS Y + N + L + +
Sbjct: 256 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGR---YVKENCKPLKSYMLQD 312
Query: 264 NLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+L+ L DL+ +ML++DP++RI+ +A+ HP+F L
Sbjct: 313 SLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 349
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 132/304 (43%), Gaps = 58/304 (19%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSIL 57
+D F+ +G+G +G VY AREK I+ALK K++L + EGV RE+ I
Sbjct: 12 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL--EKEGVEHQLRREIEIQ 69
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEY-----MDTDLKKYIRSFRQTGENIPVN 112
L R P+++R+ + + + +YL+ E+ + +L+K+ R Q
Sbjct: 70 SHL-RHPNILRMYNYFHDRKR-----IYLMLEFAPRGELYKELQKHGRFDEQRS------ 117
Query: 113 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTH 172
+ M +L + +CH ++HRD+KP NLLM K LKIAD G + P +
Sbjct: 118 --ATFMEELADALHYCHERKVIHRDIKPENLLMGYKG-ELKIADFGW--SVHAPSLRRRX 172
Query: 173 EILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL-LG 231
TL Y PE++ G TH VD+W + E + F S + I + L
Sbjct: 173 MCGTLDYLPPEMIEGKTH-DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK 231
Query: 232 TPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAM 291
P P L DL+ ++L+Y P +R+ K M
Sbjct: 232 FP-----------------------------PFLSDGSKDLISKLLRYHPPQRLPLKGVM 262
Query: 292 EHPY 295
EHP+
Sbjct: 263 EHPW 266
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 152/337 (45%), Gaps = 52/337 (15%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKI-VALKKTRLHEDDEGVPPTTLR-EVSILRM 59
+ + +E + +GEGT+GKV + A GK VALK R + G R E+++L+
Sbjct: 49 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIR----NVGKYREAARLEINVLKK 104
Query: 60 LSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY 119
+ + + V + + FE + + ++++ + P+ V+ + Y
Sbjct: 105 IKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKE--NNFQPYPLPHVRHMAY 162
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLM------------------DRKTMTLKIADLGLAR 161
QLC + F H + + H DLKP N+L K ++++AD G A
Sbjct: 163 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA- 221
Query: 162 AFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T + +T + T YR PEV+L ++ D+WS+ CI E LF +
Sbjct: 222 --TFDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 278
Query: 222 QLLHIFRLLG---------TPNEK-------VWPGVSSLMNWHEYPQWNPQSLATAV--P 263
L+ + ++LG T +K VW SS Y + N + L + +
Sbjct: 279 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDG---RYVKENCKPLKSYMLQD 335
Query: 264 NLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
+L+ L DL+ +ML++DP++RI+ +A+ HP+F L
Sbjct: 336 SLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 372
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 132/304 (43%), Gaps = 58/304 (19%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSIL 57
+D F+ +G+G +G VY AREK I+ALK K++L + EGV RE+ I
Sbjct: 11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL--EKEGVEHQLRREIEIQ 68
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEY-----MDTDLKKYIRSFRQTGENIPVN 112
L R P+++R+ + + + +YL+ E+ + +L+K+ R Q
Sbjct: 69 SHL-RHPNILRMYNYFHDRKR-----IYLMLEFAPRGELYKELQKHGRFDEQRS------ 116
Query: 113 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTH 172
+ M +L + +CH ++HRD+KP NLLM K LKIAD G + P +
Sbjct: 117 --ATFMEELADALHYCHERKVIHRDIKPENLLMGYKG-ELKIADFGW--SVHAPSLRRRX 171
Query: 173 EILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL-LG 231
TL Y PE++ G TH VD+W + E + F S + I + L
Sbjct: 172 MCGTLDYLPPEMIEGKTH-DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK 230
Query: 232 TPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAM 291
P P L DL+ ++L+Y P +R+ K M
Sbjct: 231 FP-----------------------------PFLSDGSKDLISKLLRYHPPQRLPLKGVM 261
Query: 292 EHPY 295
EHP+
Sbjct: 262 EHPW 265
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 64 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 114
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + T TL
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRTELCGTLD 171
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 172 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 224
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 225 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 132/287 (45%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG YG+V A + T + VA+K + + P +E+ I +ML+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + R G +P + +QL
Sbjct: 64 E-NVVKFY----GHRREG-NIQYLFLEYCSGG-ELFDRIEPDIG--MPEPDAQRFFHQLM 114
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P++
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC--- 214
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
EY W ++ +D L LL ++L +PS RI+
Sbjct: 215 -------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 132/287 (45%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG YG+V A + T + VA+K + + P +E+ I +ML+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + R G +P + +QL
Sbjct: 64 E-NVVKFY----GHRREG-NIQYLFLEYCSGG-ELFDRIEPDIG--MPEPDAQRFFHQLM 114
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P++
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC--- 214
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
EY W ++ +D L LL ++L +PS RI+
Sbjct: 215 -------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG YG+V A + T + VA+K + + P +E+ I +ML+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + + R G +P + +QL
Sbjct: 64 E-NVVKFY----GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLM 114
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P++
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC--- 214
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
EY W ++ +D L LL ++L +PS RI+
Sbjct: 215 -------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 132/287 (45%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG YG+V A + T + VA+K + + P +E+ I +ML+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + R G +P + +QL
Sbjct: 64 E-NVVKFY----GHRREG-NIQYLFLEYCSGG-ELFDRIEPDIG--MPEPDAQRFFHQLM 114
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P++
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC--- 214
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
EY W ++ +D L LL ++L +PS RI+
Sbjct: 215 -------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 132/287 (45%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG YG+V A + T + VA+K + + P +E+ I +ML+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 64
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + R G +P + +QL
Sbjct: 65 E-NVVKFY----GHRREG-NIQYLFLEYCSGG-ELFDRIEPDIG--MPEPDAQRFFHQLM 115
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P++
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC--- 215
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
EY W ++ +D L LL ++L +PS RI+
Sbjct: 216 -------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 80
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 81 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 131
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + T TL
Sbjct: 132 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLD 188
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 189 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 241
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 242 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 276
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 132/287 (45%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG YG+V A + T + VA+K + + P +E+ I +ML+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + R G +P + +QL
Sbjct: 64 E-NVVKFY----GHRREG-NIQYLFLEYCSGG-ELFDRIEPDIG--MPEPDAQRFFHQLM 114
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P++
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC--- 214
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
EY W ++ +D L LL ++L +PS RI+
Sbjct: 215 -------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 135/299 (45%), Gaps = 50/299 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 68
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSL 117
L R P+++RL T +YL+ EY ++ K ++ + E +
Sbjct: 69 HL-RHPNILRLYGYFHDA-----TRVYLILEYAPRGEVYKELQKLSKFDEQ----RTATY 118
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 177
+ +L +++CH ++HRD+KP NLL+ LKIAD G + P + T TL
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTL 175
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 237
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 176 DYLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 229
Query: 238 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 230 ------------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 133/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 68
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 69 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 119
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + T TL
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLD 176
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE + G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 177 YLPPEXIEGRXH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 229
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 230 -----------------------FPDFVTEGARDLISRLLKHNPSQRPXLREVLEHPW 264
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 48/299 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 89
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 90 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 140
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + T TL
Sbjct: 141 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLD 197
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 198 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 250
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 296
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 251 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 64
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 65 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 115
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + T TL
Sbjct: 116 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRTDLCGTLD 172
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 173 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 225
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 226 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 132/287 (45%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG YG+V A + T + VA+K + + P +E+ I +ML+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 64
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + R G +P + +QL
Sbjct: 65 E-NVVKFY----GHRREG-NIQYLFLEYCSGG-ELFDRIEPDIG--MPEPDAQRFFHQLM 115
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P++
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC--- 215
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
EY W ++ +D L LL ++L +PS RI+
Sbjct: 216 -------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG YG+V A + T + VA+K + + P +E+ I +ML+
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 62
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + + R G +P + +QL
Sbjct: 63 E-NVVKFY----GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLM 113
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 114 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYV 172
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P++
Sbjct: 173 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC--- 213
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
EY W ++ +D L LL ++L +PS RI+
Sbjct: 214 -------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 253
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 132/287 (45%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG YG+V A + T + VA+K + + P +E+ I +ML+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + R G +P + +QL
Sbjct: 64 E-NVVKFY----GHRREG-NIQYLFLEYCSGG-ELFDRIEPDIG--MPEPDAQRFFHQLM 114
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P++
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC--- 214
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
EY W ++ +D L LL ++L +PS RI+
Sbjct: 215 -------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG YG+V A + T + VA+K + + P +E+ I +ML+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + + R G +P + +QL
Sbjct: 64 E-NVVKFY----GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLM 114
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P++
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC--- 214
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
EY W ++ +D L LL ++L +PS RI+
Sbjct: 215 -------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 68
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 69 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 119
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + T TL
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRTDLCGTLD 176
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 177 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 229
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 230 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG YG+V A + T + VA+K + + P +E+ I +ML+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNH 64
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + + R G +P + +QL
Sbjct: 65 E-NVVKFY----GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLM 115
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMXGTLPYV 174
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P++
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC--- 215
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
EY W ++ +D L LL ++L +PS RI+
Sbjct: 216 -------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG YG+V A + T + VA+K + + P +E+ I +ML+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNH 63
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + + R G +P + +QL
Sbjct: 64 E-NVVKFY----GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLM 114
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P++
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC--- 214
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
EY W ++ +D L LL ++L +PS RI+
Sbjct: 215 -------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 64 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 114
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + T TL
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRTDLCGTLD 171
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 172 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 224
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 225 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 64 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 114
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + T TL
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLD 171
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 172 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 224
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 225 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 64 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 114
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + T TL
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRTDLCGTLD 171
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 172 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 224
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 225 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG YG+V A + T + VA+K + + P +E+ I +ML+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 64
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + + R G +P + +QL
Sbjct: 65 E-NVVKFY----GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLM 115
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P++
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC--- 215
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
EY W ++ +D L LL ++L +PS RI+
Sbjct: 216 -------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 135/298 (45%), Gaps = 41/298 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK--KTRLHEDDEGVPPTTLREVSILRM 59
V D ++ LE++G G +G V+R EKATG++ K T D T E+SI+
Sbjct: 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY----TVKNEISIMNQ 104
Query: 60 LSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY 119
L P ++ L D E + + L+ E++ + + V + M
Sbjct: 105 LHH-PKLINLHDAF-----EDKYEMVLILEFLSGG--ELFDRIAAEDYKMSEAEVINYMR 156
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLMD-RKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
Q C+G+ H H I+H D+KP N++ + +K ++KI D GLA P + T
Sbjct: 157 QACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN-PDEIVKVTTATAE 215
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
+ APE+ + DMW++ + L++ + F G+ +L+ L ++ R
Sbjct: 216 FAAPEI-VDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC--------- 265
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
+W +++ + ++ P + D ++ +LQ +P KR++ A+EHP+
Sbjct: 266 -------DW----EFDEDAFSSVSP----EAKDFIKNLLQKEPRKRLTVHDALEHPWL 308
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG YG+V A + T + VA+K + + P +E+ I +ML+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 64
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + + R G +P + +QL
Sbjct: 65 E-NVVKFY----GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLM 115
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P++
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC--- 215
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
EY W ++ +D L LL ++L +PS RI+
Sbjct: 216 -------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 132/287 (45%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG YG+V A + T + VA+K + + P +E+ I +ML+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + + R G +P + +QL
Sbjct: 64 E-NVVKFY----GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLM 114
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------------PS 211
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
S EY W ++ +D L LL ++L +PS RI+
Sbjct: 212 DSX----QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG YG+V A + T + VA+K + + P +E+ I +ML+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 64
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + + R G +P + +QL
Sbjct: 65 E-NVVKFY----GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLM 115
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P++
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC--- 215
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
EY W ++ +D L LL ++L +PS RI+
Sbjct: 216 -------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG YG+V A + T + VA+K + + P +E+ I +ML+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + + R G +P + +QL
Sbjct: 64 E-NVVKFY----GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLM 114
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P++
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC--- 214
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
EY W ++ +D L LL ++L +PS RI+
Sbjct: 215 -------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 101/211 (47%), Gaps = 13/211 (6%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
L+ +G+G + KV AR TGK VA+K + + REV I ++L+ P++V+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNH-PNIVK 77
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAF 127
L +V E LYLV EY ++ Y+ + + E ++ Q+ V +
Sbjct: 78 LFEVI-----ETEKTLYLVXEYASGGEVFDYLVAHGRXKEK----EARAKFRQIVSAVQY 128
Query: 128 CHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLG 187
CH I+HRDLK NLL+D +KIAD G + FT K Y APE+ G
Sbjct: 129 CHQKFIVHRDLKAENLLLD-ADXNIKIADFGFSNEFTFG-NKLDAFCGAPPYAAPELFQG 186
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDS 218
+ VD+WS+ I LV+ + F G +
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG YG+V A + T + VA+K + + P +E+ I +ML+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNH 63
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + + R G +P + +QL
Sbjct: 64 E-NVVKFY----GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLM 114
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P++
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC--- 214
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
EY W ++ +D L LL ++L +PS RI+
Sbjct: 215 -------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG YG+V A + T + VA+K + + P +E+ I +ML+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 64
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + + R G +P + +QL
Sbjct: 65 E-NVVKFY----GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLM 115
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P++
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC--- 215
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
EY W ++ +D L LL ++L +PS RI+
Sbjct: 216 -------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 68
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 69 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 119
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + T TL
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLD 176
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 177 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 229
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 230 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 66
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 67 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 117
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + T TL
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLD 174
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 175 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 227
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 228 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 64 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 114
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + T TL
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRTXLCGTLD 171
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 172 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 224
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 225 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 66
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 67 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 117
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + T TL
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLD 174
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 175 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 227
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 228 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 67
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 68 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 118
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + T TL
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLD 175
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 176 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 228
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 229 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 263
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 62
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 63 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 113
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + T TL
Sbjct: 114 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLD 170
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 171 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 223
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 224 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 137/305 (44%), Gaps = 62/305 (20%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D FE ++G G VYR ++K T K ALK + D + V E+ +L LS
Sbjct: 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIV----RTEIGVLLRLSH- 107
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVF--EYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
P++++L ++ + E VL LV E D ++K S R + + Q+
Sbjct: 108 PNIIKLKEIFETPT-EISLVLELVTGGELFDRIVEKGYYSERDAADAVK---------QI 157
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEIL---- 175
+ VA+ H +GI+HRDLKP NLL LKIAD GL+ K H++L
Sbjct: 158 LEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLS-------KIVEHQVLMKTV 210
Query: 176 --TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 233
T Y APE+L G Y VDMWSV I L+ F + Q +FR
Sbjct: 211 CGTPGYCAPEILRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERGDQ---FMFR----- 261
Query: 234 NEKVWPGVSSLMNWHEY---PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKA 290
++N Y P W+ SL + DL+ +++ DP KR++ +A
Sbjct: 262 ---------RILNCEYYFISPWWDEVSL---------NAKDLVRKLIVLDPKKRLTTFQA 303
Query: 291 MEHPY 295
++HP+
Sbjct: 304 LQHPW 308
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 131/297 (44%), Gaps = 40/297 (13%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLR-EVSILRMLSR 62
D F K+G G +G V+ E+++G +K +++D VP + E+ +L+ L
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKT--INKDRSQVPMEQIEAEIEVLKSLDH 79
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQL 121
P+++++ +V + + +Y+V E + +L + I S + G+ + V LM Q+
Sbjct: 80 -PNIIKIFEVFEDYHN-----MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEILTLWY 179
+A+ H ++H+DLKP N+L + +KI D GLA F + T+ T Y
Sbjct: 134 MNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD-EHSTNAAGTALY 192
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWP 239
APEV + D+WS + L+T F G
Sbjct: 193 MAPEVFKRDVTFK--CDIWSAGVVMYFLLTGCLPFTG----------------------- 227
Query: 240 GVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
+SL + + + A L +DLL+QML DP +R SA + + H +F
Sbjct: 228 --TSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWF 282
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 131/287 (45%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG YG+V A + T + VA+K + + P +E+ I ML+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINAMLNH 64
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + R G +P + +QL
Sbjct: 65 E-NVVKFY----GHRREG-NIQYLFLEYCSGG-ELFDRIEPDIG--MPEPDAQRFFHQLM 115
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P++
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC--- 215
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
EY W ++ +D L LL ++L +PS RI+
Sbjct: 216 -------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 64
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 65 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 115
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + T TL
Sbjct: 116 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SCHAPSSRRTTLSGTLD 172
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 173 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 225
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 226 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 130/299 (43%), Gaps = 35/299 (11%)
Query: 2 VMDAFEKLEKV-GEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
V D ++ ++V G G GKV + TG+ ALK L++ P +EV
Sbjct: 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALK--LLYDS-----PKARQEVDHHWQA 78
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
S PH+V ++DV + + G+ L ++ E M+ + + R + + +M
Sbjct: 79 SGGPHIVCILDVYENMH-HGKRCLLIIMECMEGG-ELFSRIQERGDQAFTEREAAEIMRD 136
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+ + F H H I HRD+KP NLL K LK+ D G A+ T T +
Sbjct: 137 IGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ--NALQTPCYTPY 194
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y APEV LG Y + DMWS+ I L+ F ++ + +
Sbjct: 195 YVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT---------------GQAIS 238
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
PG+ + +Y NP+ + +D L+ +L+ DP++R++ + M HP+ +
Sbjct: 239 PGMKRRIRLGQYGFPNPE-----WSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWIN 292
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 130/299 (43%), Gaps = 35/299 (11%)
Query: 2 VMDAFEKLEKV-GEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
V D ++ ++V G G GKV + TG+ ALK L++ P +EV
Sbjct: 7 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALK--LLYDS-----PKARQEVDHHWQA 59
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
S PH+V ++DV + + G+ L ++ E M+ + + R + + +M
Sbjct: 60 SGGPHIVCILDVYENMH-HGKRCLLIIMECMEGG-ELFSRIQERGDQAFTEREAAEIMRD 117
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+ + F H H I HRD+KP NLL K LK+ D G A+ T T +
Sbjct: 118 IGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ--NALQTPCYTPY 175
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y APEV LG Y + DMWS+ I L+ F ++ + +
Sbjct: 176 YVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT---------------GQAIS 219
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
PG+ + +Y NP+ + +D L+ +L+ DP++R++ + M HP+ +
Sbjct: 220 PGMKRRIRLGQYGFPNPE-----WSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWIN 273
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 50/307 (16%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRL-------HEDDEGVPPTTLREVSI 56
+ +E E +G G V R K T K A+K + E+ + + TL+EV I
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 57 LRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNT--V 114
LR +S P++++L D E T +LVF DL K F E + ++
Sbjct: 64 LRKVSGHPNIIQLKD-----TYETNTFFFLVF-----DLMKKGELFDYLTEKVTLSEKET 113
Query: 115 KSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI 174
+ +M L + + H I+HRDLKP N+L+D M +K+ D G + P +K
Sbjct: 114 RKIMRALLEVICALHKLNIVHRDLKPENILLD-DDMNIKLTDFGFSCQLD-PGEKLREVC 171
Query: 175 LTLWYRAPEVLLGSTH-----YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL 229
T Y APE++ S + Y VDMWS I L+ + F +Q+L + R+
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF---WHRKQML-MLRM 227
Query: 230 LGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKK 289
+ + N + P+W+ S DL+ + L P KR +A++
Sbjct: 228 IMSGNYQFGS-----------PEWDDYSDTVK---------DLVSRFLVVQPQKRYTAEE 267
Query: 290 AMEHPYF 296
A+ HP+F
Sbjct: 268 ALAHPFF 274
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 133/299 (44%), Gaps = 48/299 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 89
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 90 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 140
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + TL
Sbjct: 141 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRDDLCGTLD 197
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 198 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 250
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 296
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 251 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 50/307 (16%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRL-------HEDDEGVPPTTLREVSI 56
+ +E E +G G V R K T K A+K + E+ + + TL+EV I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 57 LRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNT--V 114
LR +S P++++L D E T +LVF DL K F E + ++
Sbjct: 77 LRKVSGHPNIIQLKD-----TYETNTFFFLVF-----DLMKKGELFDYLTEKVTLSEKET 126
Query: 115 KSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI 174
+ +M L + + H I+HRDLKP N+L+D M +K+ D G + P +K
Sbjct: 127 RKIMRALLEVICALHKLNIVHRDLKPENILLD-DDMNIKLTDFGFSCQLD-PGEKLREVC 184
Query: 175 LTLWYRAPEVLLGSTH-----YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL 229
T Y APE++ S + Y VDMWS I L+ + F +Q+L + R+
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF---WHRKQML-MLRM 240
Query: 230 LGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKK 289
+ + N + P+W+ S DL+ + L P KR +A++
Sbjct: 241 IMSGNYQFGS-----------PEWDDYSDTVK---------DLVSRFLVVQPQKRYTAEE 280
Query: 290 AMEHPYF 296
A+ HP+F
Sbjct: 281 ALAHPFF 287
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 133/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 65
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 66 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 116
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + TL
Sbjct: 117 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRXXLCGTLD 173
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 174 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 226
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 227 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 134/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 66
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 67 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 117
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIA+ G + P + T TL
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIANFGW--SVHAPSSRRTTLCGTLD 174
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 175 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 227
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 228 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 134/299 (44%), Gaps = 50/299 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 68
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSL 117
L R P+++RL T +YL+ EY ++ K ++ + E +
Sbjct: 69 HL-RHPNILRLYGYFHDA-----TRVYLILEYAPRGEVYKELQKLSKFDEQ----RTATY 118
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 177
+ +L +++CH ++HRD+KP NLL+ LKIAD G + P + TL
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRXXLXGTL 175
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 237
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 176 DYLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 229
Query: 238 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 230 ------------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 133/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 66
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 67 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 117
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + TL
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRAALCGTLD 174
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 175 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 227
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 228 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 134/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 65
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 66 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 116
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIA+ G + P + T TL
Sbjct: 117 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIANFGW--SVHAPSSRRTTLCGTLD 173
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 174 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 226
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 227 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 133/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK I+ALK K +L + GV REV I
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 60
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 61 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 111
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + T TL
Sbjct: 112 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLD 168
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 169 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 221
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 222 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 50/307 (16%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRL-------HEDDEGVPPTTLREVSI 56
+ +E E +G G V R K T K A+K + E+ + + TL+EV I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 57 LRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNT--V 114
LR +S P++++L D E T +LVF DL K F E + ++
Sbjct: 77 LRKVSGHPNIIQLKD-----TYETNTFFFLVF-----DLMKKGELFDYLTEKVTLSEKET 126
Query: 115 KSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI 174
+ +M L + + H I+HRDLKP N+L+D M +K+ D G + P +K
Sbjct: 127 RKIMRALLEVICALHKLNIVHRDLKPENILLD-DDMNIKLTDFGFSCQLD-PGEKLRSVC 184
Query: 175 LTLWYRAPEVLLGSTH-----YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL 229
T Y APE++ S + Y VDMWS I L+ + F +Q+L + R+
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF---WHRKQML-MLRM 240
Query: 230 LGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKK 289
+ + N + P+W+ S DL+ + L P KR +A++
Sbjct: 241 IMSGNYQFGS-----------PEWDDYSDTVK---------DLVSRFLVVQPQKRYTAEE 280
Query: 290 AMEHPYF 296
A+ HP+F
Sbjct: 281 ALAHPFF 287
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 133/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 64 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 114
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + TL
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRAALCGTLD 171
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 172 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 224
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 225 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 133/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 64 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 114
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + TL
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRXXLCGTLD 171
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 172 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 224
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 225 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 133/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 66
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 67 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 117
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + TL
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRXXLCGTLD 174
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 175 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 227
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 228 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 143/303 (47%), Gaps = 52/303 (17%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATG-----KIVALKK--TRLHEDDEGVPPTTLREVSI 56
D ++ E++G+G + V R + TG KI+ KK R H+ E RE I
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE-------REARI 56
Query: 57 LRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
R+L + P++VRL D ++EG YLVF+ + +L + I + E + ++
Sbjct: 57 CRLL-KHPNIVRLHD---SISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ 110
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHE 173
Q+ + V CH +GI+HRDLKP NLL+ K+ +K+AD GLA + +
Sbjct: 111 ----QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGF 166
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 233
T Y +PEVL Y VDMW+ I L+ F D + +L
Sbjct: 167 AGTPGYLSPEVLRKDP-YGKPVDMWACGVILYILLVGYPPF-WDEDQHRLY--------- 215
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
+++ G + P+W+ T P + DL+ +ML +P+KRI+A +A++H
Sbjct: 216 -QQIKAGAYDFPS----PEWD-----TVTP----EAKDLINKMLTINPAKRITASEALKH 261
Query: 294 PYF 296
P+
Sbjct: 262 PWI 264
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 133/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 64
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 65 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 115
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + TL
Sbjct: 116 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRDTLCGTLD 172
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 173 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 225
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 226 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 133/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 66
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 67 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 117
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + TL
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRDDLCGTLD 174
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ + I R+ T
Sbjct: 175 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 227
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 228 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 143/303 (47%), Gaps = 52/303 (17%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATG-----KIVALKK--TRLHEDDEGVPPTTLREVSI 56
D ++ E++G+G + V R + TG KI+ KK R H+ E RE I
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE-------REARI 56
Query: 57 LRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
R+L + P++VRL D ++EG YLVF+ + +L + I + E + ++
Sbjct: 57 CRLL-KHPNIVRLHD---SISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ 110
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHE 173
Q+ + V CH +GI+HRDLKP NLL+ K+ +K+AD GLA + +
Sbjct: 111 ----QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGF 166
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 233
T Y +PEVL Y VDMW+ I L+ F D + +L
Sbjct: 167 AGTPGYLSPEVLRKDP-YGKPVDMWACGVILYILLVGYPPF-WDEDQHRLY--------- 215
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
+++ G + P+W+ T P + DL+ +ML +P+KRI+A +A++H
Sbjct: 216 -QQIKAGAYDFPS----PEWD-----TVTP----EAKDLINKMLTINPAKRITASEALKH 261
Query: 294 PYF 296
P+
Sbjct: 262 PWI 264
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 137/302 (45%), Gaps = 42/302 (13%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSI 56
MV D +E E++G G + V + R+K TGK A +KK RL GV + REV+I
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 57 LRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKS 116
LR + R P+++ L D+ E +T + L+ E + + F E++ +
Sbjct: 62 LREI-RHPNIITLHDI-----FENKTDVVLILELVSGG---ELFDFLAEKESLTEDEATQ 112
Query: 117 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTM---TLKIADLGLARAFTLPIKKYTHE 173
+ Q+ GV + H I H DLKP N+++ K + +K+ D G+A ++ +
Sbjct: 113 FLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG-NEFKNI 171
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 233
T + APE+ + DMWS+ I L++ + F G+++ + L +I +
Sbjct: 172 FGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF 230
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
+E+ + S L D + ++L DP +R++ +++EH
Sbjct: 231 DEEYFSNTSELAK------------------------DFIRRLLVKDPKRRMTIAQSLEH 266
Query: 294 PY 295
+
Sbjct: 267 SW 268
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ FE +G+G +G VY AREK + I+ALK K +L + GV REV I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ + T + +
Sbjct: 64 HL-RHPNILRLYGYFHDS-----TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYI 114
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + TL
Sbjct: 115 TELANALSYCHSKKVIHRDIKPENLLLG-SAGELKIADFGW--SVHAPSSRRAALCGTLD 171
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F ++ I R+ T
Sbjct: 172 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFT------ 224
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 225 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 130/284 (45%), Gaps = 51/284 (17%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
FE++ +G+G +G+V +AR + A+KK R E+ T L EV +L L+ +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK---LSTILSEVMLLASLNHQ-Y 63
Query: 66 VVRLMD--------VKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKS 116
VVR VK + ++ L++ EY + L I S N +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS---ENLNQQRDEYWR 120
Query: 117 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKK----- 169
L Q+ + +++ H GI+HRDLKP N+ +D ++ +KI D GLA+ +L I K
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 170 -------YTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELV-------------- 208
T I T Y A EVL G+ HY+ +DM+S+ IF E++
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILK 239
Query: 209 ---TKTALFP---GDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 246
+ + FP D++++ I RLL + PG +L+N
Sbjct: 240 KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 130/284 (45%), Gaps = 51/284 (17%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
FE++ +G+G +G+V +AR + A+KK R E+ T L EV +L L+ +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK---LSTILSEVMLLASLNHQ-Y 63
Query: 66 VVRLMD--------VKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKS 116
VVR VK + ++ L++ EY + L I S N +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHS---ENLNQQRDEYWR 120
Query: 117 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKK----- 169
L Q+ + +++ H GI+HRDLKP N+ +D ++ +KI D GLA+ +L I K
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 170 -------YTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELV-------------- 208
T I T Y A EVL G+ HY+ +DM+S+ IF E++
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILK 239
Query: 209 ---TKTALFP---GDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 246
+ + FP D++++ I RLL + PG +L+N
Sbjct: 240 KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 136/302 (45%), Gaps = 42/302 (13%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSI 56
MV D +E E++G G + V + R+K TGK A +KK RL GV + REV+I
Sbjct: 23 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNI 82
Query: 57 LRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKS 116
LR + R P+++ L D+ E +T + L+ E + + F E++ +
Sbjct: 83 LREI-RHPNIITLHDI-----FENKTDVVLILELVSGG---ELFDFLAEKESLTEDEATQ 133
Query: 117 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTM---TLKIADLGLARAFTLPIKKYTHE 173
+ Q+ GV + H I H DLKP N+++ K + +K+ D G+A ++ +
Sbjct: 134 FLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG-NEFKNI 192
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 233
T + APE+ + DMWS+ I L++ + F G+++ + L +I +
Sbjct: 193 FGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF 251
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
+E+ + S L D + ++L DP +R+ +++EH
Sbjct: 252 DEEYFSNTSELAK------------------------DFIRRLLVKDPKRRMXIAQSLEH 287
Query: 294 PY 295
+
Sbjct: 288 SW 289
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 131/287 (45%), Gaps = 40/287 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ ++ ++ +GEG G+V A + T + VA+K + + P +E+ I +ML+
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +VV+ G +EG + YL EY + + R G +P + +QL
Sbjct: 64 E-NVVKFY----GHRREG-NIQYLFLEYCSGG-ELFDRIEPDIG--MPEPDAQRFFHQLM 114
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYR 180
GV + HG GI HRD+KP NLL+D + LKI+D GLA F ++ + TL Y
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APE+L ++ VD+WS + TA+ G+ Q P++
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC--- 214
Query: 241 VSSLMNWHEYPQW-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
EY W ++ +D L LL ++L +PS RI+
Sbjct: 215 -------QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 130/297 (43%), Gaps = 36/297 (12%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
++G G + V + K+TG+ A K + + L E+++L + P V+ L
Sbjct: 36 ELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 130
+V E + + L+ EY + + + E + N V L+ Q+ +GV + H
Sbjct: 96 EVY-----ENTSEIILILEYAAGG-EIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ 149
Query: 131 HGILHRDLKPHNLLMDR--KTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLG 187
+ I+H DLKP N+L+ +KI D G++R + EI+ T Y APE+ L
Sbjct: 150 NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE--LREIMGTPEYLAPEI-LN 206
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+TA DMW++ I L+T T+ F G+ + L+I ++ +E+ + VS L
Sbjct: 207 YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQL--- 263
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKTRL 304
D ++ +L +P KR +A+ + H + D L
Sbjct: 264 ---------------------ATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENL 299
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 42/302 (13%)
Query: 2 VMDAFEKLEKV-GEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
++D ++ +V G G GKV + K T + ALK + +D P REV +
Sbjct: 13 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK---MLQD----CPKARREVELHWRA 65
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
S+ PH+VR++DV + GR L +V E +D + + R + + +M
Sbjct: 66 SQCPHIVRIVDVYENLYA-GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKS 123
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+ + + + H I HRD+KP NLL R LK+ D G A+ T T T +
Sbjct: 124 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTEPCYTPY 182
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y APEV LG Y + DMWS+ I L+ F + L +
Sbjct: 183 YVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL---------------AIS 226
Query: 239 PGVSSLMNWHEY----PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
PG+ + + +Y P+W+ S + L+ +L+ +P++R++ + M HP
Sbjct: 227 PGMKTRIRMGQYEFPNPEWSEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHP 277
Query: 295 YF 296
+
Sbjct: 278 WI 279
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 133/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ F+ +G+G +G VY ARE+ + I+ALK KT+L + GV REV I
Sbjct: 10 TLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQL--EKAGVEHQLRREVEIQS 67
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ T + +
Sbjct: 68 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSRFDEQRTA-TYI 118
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + T TL
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLLG-SNGELKIADFGW--SVHAPSSRRTTLCGTLD 175
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F + + I R+ T
Sbjct: 176 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT------ 228
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++ S+R++ + +EHP+
Sbjct: 229 -----------------------FPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 42/302 (13%)
Query: 2 VMDAFEKLEKV-GEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
++D ++ +V G G GKV + K T + ALK + +D P REV +
Sbjct: 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK---MLQD----CPKARREVELHWRA 67
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
S+ PH+VR++DV + GR L +V E +D + + R + + +M
Sbjct: 68 SQCPHIVRIVDVYENLYA-GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKS 125
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+ + + + H I HRD+KP NLL R LK+ D G A+ T T T +
Sbjct: 126 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPY 184
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y APEV LG Y + DMWS+ I L+ F + L +
Sbjct: 185 YVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL---------------AIS 228
Query: 239 PGVSSLMNWHEY----PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
PG+ + + +Y P+W+ S + L+ +L+ +P++R++ + M HP
Sbjct: 229 PGMKTRIRMGQYEFPNPEWSEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHP 279
Query: 295 YF 296
+
Sbjct: 280 WI 281
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 11/225 (4%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M+ + +L+K+GEG++GK + G+ +K+ + + REV++L + +
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-K 81
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
P++V+ + + E LY+V +Y + DL K I + Q G + + Q+
Sbjct: 82 HPNIVQYRE-----SFEENGSLYIVMDYCEGGDLFKRINA--QKGVLFQEDQILDWFVQI 134
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
C + H ILHRD+K N+ + K T+++ D G+AR ++ I T +Y +
Sbjct: 135 CLALKHVHDRKILHRDIKSQNIFLT-KDGTVQLGDFGIARVLNSTVELARACIGTPYYLS 193
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHI 226
PE+ + Y+ D+W++ C+ EL T F S +L I
Sbjct: 194 PEI-CENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI 237
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 42/302 (13%)
Query: 2 VMDAFEKLEKV-GEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
++D ++ +V G G GKV + K T + ALK + +D P REV +
Sbjct: 19 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK---MLQD----CPKARREVELHWRA 71
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
S+ PH+VR++DV + GR L +V E +D + + R + + +M
Sbjct: 72 SQCPHIVRIVDVYENLYA-GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKS 129
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+ + + + H I HRD+KP NLL R LK+ D G A+ T T T +
Sbjct: 130 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPY 188
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y APEV LG Y + DMWS+ I L+ F + L +
Sbjct: 189 YVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL---------------AIS 232
Query: 239 PGVSSLMNWHEY----PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
PG+ + + +Y P+W+ S + L+ +L+ +P++R++ + M HP
Sbjct: 233 PGMKTRIRMGQYEFPNPEWSEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHP 283
Query: 295 YF 296
+
Sbjct: 284 WI 285
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 42/302 (13%)
Query: 2 VMDAFEKLEKV-GEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
++D ++ +V G G GKV + K T + ALK + +D P REV +
Sbjct: 21 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK---MLQD----CPKARREVELHWRA 73
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
S+ PH+VR++DV + GR L +V E +D + + R + + +M
Sbjct: 74 SQCPHIVRIVDVYENLYA-GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKS 131
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+ + + + H I HRD+KP NLL R LK+ D G A+ T T T +
Sbjct: 132 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPY 190
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y APEV LG Y + DMWS+ I L+ F + L +
Sbjct: 191 YVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL---------------AIS 234
Query: 239 PGVSSLMNWHEY----PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
PG+ + + +Y P+W+ S + L+ +L+ +P++R++ + M HP
Sbjct: 235 PGMKTRIRMGQYEFPNPEWSEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHP 285
Query: 295 YF 296
+
Sbjct: 286 WI 287
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 42/302 (13%)
Query: 2 VMDAFEKLEKV-GEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
++D ++ +V G G GKV + K T + ALK + +D P REV +
Sbjct: 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK---MLQD----CPKARREVELHWRA 111
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
S+ PH+VR++DV + GR L +V E +D + + R + + +M
Sbjct: 112 SQCPHIVRIVDVYENLYA-GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKS 169
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+ + + + H I HRD+KP NLL R LK+ D G A+ T T T +
Sbjct: 170 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPY 228
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y APEV LG Y + DMWS+ I L+ F + L +
Sbjct: 229 YVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL---------------AIS 272
Query: 239 PGVSSLMNWHEY----PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
PG+ + + +Y P+W+ S + L+ +L+ +P++R++ + M HP
Sbjct: 273 PGMKTRIRMGQYEFPNPEWSEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHP 323
Query: 295 YF 296
+
Sbjct: 324 WI 325
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 42/302 (13%)
Query: 2 VMDAFEKLEKV-GEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
++D ++ +V G G GKV + K T + ALK + +D P REV +
Sbjct: 20 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK---MLQDC----PKARREVELHWRA 72
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
S+ PH+VR++DV + GR L +V E +D + + R + + +M
Sbjct: 73 SQCPHIVRIVDVYENLYA-GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKS 130
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+ + + + H I HRD+KP NLL R LK+ D G A+ T T T +
Sbjct: 131 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPY 189
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y APEV LG Y + DMWS+ I L+ F + L +
Sbjct: 190 YVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL---------------AIS 233
Query: 239 PGVSSLMNWHEY----PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
PG+ + + +Y P+W+ S + L+ +L+ +P++R++ + M HP
Sbjct: 234 PGMKTRIRMGQYEFPNPEWSEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHP 284
Query: 295 YF 296
+
Sbjct: 285 WI 286
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 42/302 (13%)
Query: 2 VMDAFEKLEKV-GEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
++D ++ +V G G GKV + K T + ALK + +D P REV +
Sbjct: 13 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK---MLQD----CPKARREVELHWRA 65
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
S+ PH+VR++DV + GR L +V E +D + + R + + +M
Sbjct: 66 SQCPHIVRIVDVYENLYA-GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKS 123
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+ + + + H I HRD+KP NLL R LK+ D G A+ T T T +
Sbjct: 124 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPY 182
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y APEV LG Y + DMWS+ I L+ F + L +
Sbjct: 183 YVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL---------------AIS 226
Query: 239 PGVSSLMNWHEY----PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
PG+ + + +Y P+W+ S + L+ +L+ +P++R++ + M HP
Sbjct: 227 PGMKTRIRMGQYEFPNPEWSEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHP 277
Query: 295 YF 296
+
Sbjct: 278 WI 279
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 42/302 (13%)
Query: 2 VMDAFEKLEKV-GEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
++D ++ +V G G GKV + K T + ALK + +D P REV +
Sbjct: 14 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK---MLQD----CPKARREVELHWRA 66
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
S+ PH+VR++DV + GR L +V E +D + + R + + +M
Sbjct: 67 SQCPHIVRIVDVYENLYA-GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKS 124
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+ + + + H I HRD+KP NLL R LK+ D G A+ T T T +
Sbjct: 125 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPY 183
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y APEV LG Y + DMWS+ I L+ F + L +
Sbjct: 184 YVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL---------------AIS 227
Query: 239 PGVSSLMNWHEY----PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
PG+ + + +Y P+W+ S + L+ +L+ +P++R++ + M HP
Sbjct: 228 PGMKTRIRMGQYEFPNPEWSEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHP 278
Query: 295 YF 296
+
Sbjct: 279 WI 280
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 42/302 (13%)
Query: 2 VMDAFEKLEKV-GEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
++D ++ +V G G GKV + K T + ALK + +D P REV +
Sbjct: 65 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK---MLQD----CPKARREVELHWRA 117
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
S+ PH+VR++DV + GR L +V E +D + + R + + +M
Sbjct: 118 SQCPHIVRIVDVYENLYA-GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKS 175
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+ + + + H I HRD+KP NLL R LK+ D G A+ T T T +
Sbjct: 176 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPY 234
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y APEV LG Y + DMWS+ I L+ F + L +
Sbjct: 235 YVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL---------------AIS 278
Query: 239 PGVSSLMNWHEY----PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
PG+ + + +Y P+W+ S + L+ +L+ +P++R++ + M HP
Sbjct: 279 PGMKTRIRMGQYEFPNPEWSEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHP 329
Query: 295 YF 296
+
Sbjct: 330 WI 331
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 42/302 (13%)
Query: 2 VMDAFEKLEKV-GEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
++D ++ +V G G GKV + K T + ALK + +D P REV +
Sbjct: 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK---MLQD----CPKARREVELHWRA 67
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
S+ PH+VR++DV + GR L +V E +D + + R + + +M
Sbjct: 68 SQCPHIVRIVDVYENLYA-GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKS 125
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+ + + + H I HRD+KP NLL R LK+ D G A+ T T T +
Sbjct: 126 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPY 184
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y APEV LG Y + DMWS+ I L+ F + L +
Sbjct: 185 YVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA---------------IS 228
Query: 239 PGVSSLMNWHEY----PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
PG+ + + +Y P+W+ S + L+ +L+ +P++R++ + M HP
Sbjct: 229 PGMKTRIRMGQYEFPNPEWSEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHP 279
Query: 295 YF 296
+
Sbjct: 280 WI 281
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 42/302 (13%)
Query: 2 VMDAFEKLEKV-GEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
++D ++ +V G G GKV + K T + ALK + +D P REV +
Sbjct: 29 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK---MLQD----CPKARREVELHWRA 81
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
S+ PH+VR++DV + GR L +V E +D + + R + + +M
Sbjct: 82 SQCPHIVRIVDVYENLYA-GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKS 139
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+ + + + H I HRD+KP NLL R LK+ D G A+ T T T +
Sbjct: 140 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPY 198
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y APEV LG Y + DMWS+ I L+ F + L +
Sbjct: 199 YVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL---------------AIS 242
Query: 239 PGVSSLMNWHEY----PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
PG+ + + +Y P+W+ S + L+ +L+ +P++R++ + M HP
Sbjct: 243 PGMKTRIRMGQYEFPNPEWSEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHP 293
Query: 295 YF 296
+
Sbjct: 294 WI 295
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 135/301 (44%), Gaps = 42/301 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D +E E++G G + V + R+K TGK A +KK RL GV + REV+IL
Sbjct: 10 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 69
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
R + R P+++ L D+ E +T + L+ E + + F E++ +
Sbjct: 70 REI-RHPNIITLHDIF-----ENKTDVVLILELVSGG---ELFDFLAEKESLTEDEATQF 120
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTM---TLKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N+++ K + +K+ D G+A ++ +
Sbjct: 121 LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG-NEFKNIF 179
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F G+++ + L +I + +
Sbjct: 180 GTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD 238
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
E+ + S L D + ++L DP +R+ +++EH
Sbjct: 239 EEYFSNTSELAK------------------------DFIRRLLVKDPKRRMXIAQSLEHS 274
Query: 295 Y 295
+
Sbjct: 275 W 275
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 134/292 (45%), Gaps = 44/292 (15%)
Query: 12 VGEGTYGKVYRAREKAT--GKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL 69
+GEG+YGKV + T + V + K + +E+ +LR L R +V++L
Sbjct: 13 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQL 71
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
+DV + K+ +Y+V EY +++ + S + + PV QL G+ + H
Sbjct: 72 VDVLYNEEKQK---MYMVMEYCVCGMQEMLDSVPE--KRFPVCQAHGYFCQLIDGLEYLH 126
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARA---FTLPIKKYTHEILTLWYRAPEVLL 186
GI+H+D+KP NLL+ TLKI+ LG+A A F T + + ++ PE+
Sbjct: 127 SQGIVHKDIKPGNLLLTTGG-TLKISALGVAEALHPFAADDTCRTSQ-GSPAFQPPEIAN 184
Query: 187 GSTHYST-AVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLM 245
G +S VD+WS + T F GD +I++L E + G
Sbjct: 185 GLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD-------NIYKLF----ENIGKG----- 228
Query: 246 NWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 296
+ A+P L DLL+ ML+Y+P+KR S ++ +H +F
Sbjct: 229 -------------SYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWF 267
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 137/301 (45%), Gaps = 42/301 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D ++ E++G G + V + REK+TG A +KK R GV + REVSIL
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ + + P+V+ L +V E +T + L+ E + + F E++
Sbjct: 69 KEI-QHPNVITLHEVY-----ENKTDVILILELV---AGGELFDFLAEKESLTEEEATEF 119
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N +L+DR +KI D GLA ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF 178
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F GD++ + L ++
Sbjct: 179 GTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
S +N+ ++ + A A D + ++L DP KR++ + +++HP
Sbjct: 230 --------SAVNYEFEDEYFSNTSALAK--------DFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 295 Y 295
+
Sbjct: 274 W 274
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 137/301 (45%), Gaps = 42/301 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D ++ E++G G + V + REK+TG A +KK R GV + REVSIL
Sbjct: 9 VDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ + + P+V+ L +V E +T + L+ E + + F E++
Sbjct: 69 KEI-QHPNVITLHEVY-----ENKTDVILILELV---AGGELFDFLAEKESLTEEEATEF 119
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N +L+DR +KI D GLA ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF 178
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F GD++ + L ++
Sbjct: 179 GTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
S +N+ ++ + A A D + ++L DP KR++ + +++HP
Sbjct: 230 --------SAVNYEFEDEYFSNTSALAK--------DFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 295 Y 295
+
Sbjct: 274 W 274
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 136/301 (45%), Gaps = 42/301 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D ++ E++G G + V + REK+TG A +KK R GV + REVSIL
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ + P+V+ L +V E +T + L+ E + + F E++
Sbjct: 69 KEIQH-PNVITLHEVY-----ENKTDVILILELV---AGGELFDFLAEKESLTEEEATEF 119
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N +L+DR +KI D GLA ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF 178
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F GD++ + L ++
Sbjct: 179 GTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
S +N+ ++ + A A D + ++L DP KR++ + +++HP
Sbjct: 230 --------SAVNYEFEDEYFSNTSALAK--------DFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 295 Y 295
+
Sbjct: 274 W 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 137/301 (45%), Gaps = 42/301 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D ++ E++G G + V + REK+TG A +KK R GV + REVSIL
Sbjct: 8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 67
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ + + P+V+ L +V E +T + L+ E + + F E++
Sbjct: 68 KEI-QHPNVITLHEVY-----ENKTDVILILELV---AGGELFDFLAEKESLTEEEATEF 118
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N +L+DR +KI D GLA ++ +
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF 177
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F GD++ + L ++
Sbjct: 178 GTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 228
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
S +N+ ++ + A A D + ++L DP KR++ + +++HP
Sbjct: 229 --------SAVNYEFEDEYFSNTSALAK--------DFIRRLLVKDPKKRMTIQDSLQHP 272
Query: 295 Y 295
+
Sbjct: 273 W 273
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 136/301 (45%), Gaps = 42/301 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D ++ E++G G + V + REK+TG A +KK R GV + REVSIL
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ + P+V+ L +V E +T + L+ E + + F E++
Sbjct: 69 KEIQH-PNVITLHEVY-----ENKTDVILILELV---AGGELFDFLAEKESLTEEEATEF 119
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N +L+DR +KI D GLA ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF 178
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F GD++ + L ++
Sbjct: 179 GTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
S +N+ ++ + A A D + ++L DP KR++ + +++HP
Sbjct: 230 --------SAVNYEFEDEYFSNTSALAK--------DFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 295 Y 295
+
Sbjct: 274 W 274
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 136/301 (45%), Gaps = 42/301 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D ++ E++G G + V + REK+TG A +KK R GV + REVSIL
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ + P+V+ L +V E +T + L+ E + + F E++
Sbjct: 69 KEIQH-PNVITLHEVY-----ENKTDVILILELV---AGGELFDFLAEKESLTEEEATEF 119
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N +L+DR +KI D GLA ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF 178
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F GD++ + L ++
Sbjct: 179 GTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
S +N+ ++ + A A D + ++L DP KR++ + +++HP
Sbjct: 230 --------SAVNYEFEDEYFSNTSALAK--------DFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 295 Y 295
+
Sbjct: 274 W 274
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 137/301 (45%), Gaps = 42/301 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D ++ E++G G + V + REK+TG A +KK R GV + REVSIL
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ + + P+V+ L +V E +T + L+ E + + F E++
Sbjct: 69 KEI-QHPNVITLHEVY-----ENKTDVILILELV---AGGELFDFLAEKESLTEEEATEF 119
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N +L+DR +KI D GLA ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF 178
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F GD++ + L ++
Sbjct: 179 GTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
S +N+ ++ + A A D + ++L DP KR++ + +++HP
Sbjct: 230 --------SAVNYEFEDEYFSNTSALAK--------DFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 295 Y 295
+
Sbjct: 274 W 274
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 137/301 (45%), Gaps = 42/301 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D ++ E++G G + V + REK+TG A +KK R GV + REVSIL
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ + + P+V+ L +V E +T + L+ E + + F E++
Sbjct: 69 KEI-QHPNVITLHEVY-----ENKTDVILILELV---AGGELFDFLAEKESLTEEEATEF 119
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N +L+DR +KI D GLA ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF 178
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F GD++ + L ++
Sbjct: 179 GTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
S +N+ ++ + A A D + ++L DP KR++ + +++HP
Sbjct: 230 --------SAVNYEFEDEYFSNTSALAK--------DFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 295 Y 295
+
Sbjct: 274 W 274
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 137/301 (45%), Gaps = 42/301 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D ++ E++G G + V + REK+TG A +KK R GV + REVSIL
Sbjct: 9 VDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ + + P+V+ L +V E +T + L+ E + + F E++
Sbjct: 69 KEI-QHPNVITLHEVY-----ENKTDVILILELV---AGGELFDFLAEKESLTEEEATEF 119
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N +L+DR +KI D GLA ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF 178
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F GD++ + L ++
Sbjct: 179 GTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
S +N+ ++ + A A D + ++L DP KR++ + +++HP
Sbjct: 230 --------SAVNYEFEDEYFSNTSALAK--------DFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 295 Y 295
+
Sbjct: 274 W 274
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 137/301 (45%), Gaps = 42/301 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D ++ E++G G + V + REK+TG A +KK R GV + REVSIL
Sbjct: 8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 67
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ + + P+V+ L +V E +T + L+ E + + F E++
Sbjct: 68 KEI-QHPNVITLHEVY-----ENKTDVILILELV---AGGELFDFLAEKESLTEEEATEF 118
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N +L+DR +KI D GLA ++ +
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF 177
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F GD++ + L ++
Sbjct: 178 GTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 228
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
S +N+ ++ + A A D + ++L DP KR++ + +++HP
Sbjct: 229 --------SAVNYEFEDEYFSNTSALAK--------DFIRRLLVKDPKKRMTIQDSLQHP 272
Query: 295 Y 295
+
Sbjct: 273 W 273
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 137/301 (45%), Gaps = 42/301 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D ++ E++G G + V + REK+TG A +KK R GV + REVSIL
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ + + P+V+ L +V E +T + L+ E + + F E++
Sbjct: 69 KEI-QHPNVITLHEVY-----ENKTDVILILELVAGG---ELFDFLAEKESLTEEEATEF 119
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N +L+DR +KI D GLA ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF 178
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F GD++ + L ++
Sbjct: 179 GTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
S +N+ ++ + A A D + ++L DP KR++ + +++HP
Sbjct: 230 --------SAVNYEFEDEYFSNTSALAK--------DFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 295 Y 295
+
Sbjct: 274 W 274
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 132/298 (44%), Gaps = 48/298 (16%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
++ F+ +G+G +G VY ARE+ + I+ALK KT+L + GV REV I
Sbjct: 10 TLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQL--EKAGVEHQLRREVEIQS 67
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L R P+++RL T +YL+ EY L R ++ T + +
Sbjct: 68 HL-RHPNILRLYGYFHDA-----TRVYLILEY--APLGTVYRELQKLSRFDEQRTA-TYI 118
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L +++CH ++HRD+KP NLL+ LKIAD G + P + TL
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLLG-SNGELKIADFGW--SVHAPSSRRDTLCGTLD 175
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y PE++ G H VD+WS+ + E + F + + I R+ T
Sbjct: 176 YLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT------ 228
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +G DL+ ++L+++ S+R++ + +EHP+
Sbjct: 229 -----------------------FPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 137/301 (45%), Gaps = 42/301 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D ++ E++G G + V + REK+TG A +KK R GV + REVSIL
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ + + P+V+ L +V E +T + L+ E + + F E++
Sbjct: 69 KEI-QHPNVITLHEVY-----ENKTDVILILELV---AGGELFDFLAEKESLTEEEATEF 119
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N +L+DR +KI D GLA ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF 178
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F GD++ + L ++
Sbjct: 179 GTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
S +N+ ++ + A A D + ++L DP KR++ + +++HP
Sbjct: 230 --------SAVNYEFEDEYFSNTSALAK--------DFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 295 Y 295
+
Sbjct: 274 W 274
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 137/301 (45%), Gaps = 42/301 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D ++ E++G G + V + REK+TG A +KK R GV + REVSIL
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ + + P+V+ L +V E +T + L+ E + + F E++
Sbjct: 69 KEI-QHPNVITLHEVY-----ENKTDVILILELVAGG---ELFDFLAEKESLTEEEATEF 119
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N +L+DR +KI D GLA ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF 178
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F GD++ + L ++
Sbjct: 179 GTPAFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
S +N+ ++ + A A D + ++L DP KR++ + +++HP
Sbjct: 230 --------SAVNYEFEDEYFSNTSALAK--------DFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 295 Y 295
+
Sbjct: 274 W 274
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 138/312 (44%), Gaps = 51/312 (16%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTLREVSILRM 59
+D FE + +G+G++GKV AR K TG + A LKK + +DD+ T+ E IL +
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDD--VECTMTEKRILSL 79
Query: 60 LSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLM 118
P + +L Q ++ L+ V E+++ DL +I+ R+ E +
Sbjct: 80 ARNHPFLTQLFCCFQTPDR-----LFFVMEFVNGGDLMFHIQKSRRFDE----ARARFYA 130
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
++ + F H GI++RDLK N+L+D + K+AD G+ + T
Sbjct: 131 AEIISALMFLHDKGIIYRDLKLDNVLLDHEGHC-KLADFGMCKEGICNGVTTATFCGTPD 189
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y APE+ L Y AVD W++ + E++ A F ++E I N++V
Sbjct: 190 YIAPEI-LQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL------NDEVV 242
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISA------KKAME 292
YP W L +D +L+ + +P+ R+ + +
Sbjct: 243 -----------YPTW-----------LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280
Query: 293 HPYFDDLDKTRL 304
HP+F ++D +L
Sbjct: 281 HPFFKEIDWAQL 292
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 138/308 (44%), Gaps = 56/308 (18%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK-----KTRLHEDDEGVPPTTLR-EVSILRMLSRDPH 65
+G G G+V A E+ T K VA+K K + E P + E+ IL+ L+ P
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH-PC 76
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTD--LKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
++++ + ++ Y+V E M+ K + + R + T K YQ+
Sbjct: 77 IIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKR-----LKEATCKLYFYQMLL 125
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEILTLW--- 178
V + H +GI+HRDLKP N+L+ + +KI D G ++ I T + TL
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-----ILGETSLMRTLCGTP 180
Query: 179 -YRAPEVL--LGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
Y APEVL +G+ Y+ AVD WS+ I L + +P SE + + + + +
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSEHRTQVSLKDQITSGKY 237
Query: 236 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
P V W E + + LDL++++L DP R + ++A+ HP+
Sbjct: 238 NFIPEV-----WAE---------------VSEKALDLVKKLLVVDPKARFTTEEALRHPW 277
Query: 296 FDDLDKTR 303
D D R
Sbjct: 278 LQDEDMKR 285
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 138/308 (44%), Gaps = 56/308 (18%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK-----KTRLHEDDEGVPPTTLR-EVSILRMLSRDPH 65
+G G G+V A E+ T K VA+K K + E P + E+ IL+ L+ P
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH-PC 75
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTD--LKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
++++ + ++ Y+V E M+ K + + R + T K YQ+
Sbjct: 76 IIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKR-----LKEATCKLYFYQMLL 124
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEILTLW--- 178
V + H +GI+HRDLKP N+L+ + +KI D G ++ I T + TL
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-----ILGETSLMRTLCGTP 179
Query: 179 -YRAPEVL--LGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
Y APEVL +G+ Y+ AVD WS+ I L + +P SE + + + + +
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSEHRTQVSLKDQITSGKY 236
Query: 236 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
P V W E + + LDL++++L DP R + ++A+ HP+
Sbjct: 237 NFIPEV-----WAE---------------VSEKALDLVKKLLVVDPKARFTTEEALRHPW 276
Query: 296 FDDLDKTR 303
D D R
Sbjct: 277 LQDEDMKR 284
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 138/308 (44%), Gaps = 56/308 (18%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK-----KTRLHEDDEGVPPTTLR-EVSILRMLSRDPH 65
+G G G+V A E+ T K VA+K K + E P + E+ IL+ L+ P
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH-PC 76
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTD--LKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
++++ + ++ Y+V E M+ K + + R + T K YQ+
Sbjct: 77 IIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKR-----LKEATCKLYFYQMLL 125
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEILTLW--- 178
V + H +GI+HRDLKP N+L+ + +KI D G ++ I T + TL
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-----ILGETSLMRTLCGTP 180
Query: 179 -YRAPEVL--LGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
Y APEVL +G+ Y+ AVD WS+ I L + +P SE + + + + +
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSEHRTQVSLKDQITSGKY 237
Query: 236 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
P V W E + + LDL++++L DP R + ++A+ HP+
Sbjct: 238 NFIPEV-----WAE---------------VSEKALDLVKKLLVVDPKARFTTEEALRHPW 277
Query: 296 FDDLDKTR 303
D D R
Sbjct: 278 LQDEDMKR 285
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 138/308 (44%), Gaps = 56/308 (18%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK-----KTRLHEDDEGVPPTTLR-EVSILRMLSRDPH 65
+G G G+V A E+ T K VA+K K + E P + E+ IL+ L+ P
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH-PC 76
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTD--LKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
++++ + ++ Y+V E M+ K + + R + T K YQ+
Sbjct: 77 IIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKR-----LKEATCKLYFYQMLL 125
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEILTLW--- 178
V + H +GI+HRDLKP N+L+ + +KI D G ++ I T + TL
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-----ILGETSLMRTLCGTP 180
Query: 179 -YRAPEVL--LGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
Y APEVL +G+ Y+ AVD WS+ I L + +P SE + + + + +
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSEHRTQVSLKDQITSGKY 237
Query: 236 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
P V W E + + LDL++++L DP R + ++A+ HP+
Sbjct: 238 NFIPEV-----WAE---------------VSEKALDLVKKLLVVDPKARFTTEEALRHPW 277
Query: 296 FDDLDKTR 303
D D R
Sbjct: 278 LQDEDMKR 285
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 138/308 (44%), Gaps = 56/308 (18%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK-----KTRLHEDDEGVPPTTLR-EVSILRMLSRDPH 65
+G G G+V A E+ T K VA+K K + E P + E+ IL+ L+ P
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH-PC 82
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTD--LKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
++++ + ++ Y+V E M+ K + + R + T K YQ+
Sbjct: 83 IIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKR-----LKEATCKLYFYQMLL 131
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEILTLW--- 178
V + H +GI+HRDLKP N+L+ + +KI D G ++ I T + TL
Sbjct: 132 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-----ILGETSLMRTLCGTP 186
Query: 179 -YRAPEVL--LGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
Y APEVL +G+ Y+ AVD WS+ I L + +P SE + + + + +
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSEHRTQVSLKDQITSGKY 243
Query: 236 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
P V W E + + LDL++++L DP R + ++A+ HP+
Sbjct: 244 NFIPEV-----WAE---------------VSEKALDLVKKLLVVDPKARFTTEEALRHPW 283
Query: 296 FDDLDKTR 303
D D R
Sbjct: 284 LQDEDMKR 291
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ V ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 96
Query: 71 DVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y + +L KYIR E + ++ + + H
Sbjct: 97 FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 147
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K+ T Y +PE+L
Sbjct: 148 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+ ++ D+W++ CI +LV F +E I +L EK +P
Sbjct: 207 KSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----- 260
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 261 -----------------------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 295
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 152/366 (41%), Gaps = 84/366 (22%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR--- 62
+ + K+G G + V+ + + VA+K + + T L E+ +L+ +
Sbjct: 33 YHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVK---SAQHYTETALDEIKLLKCVRESDP 89
Query: 63 -DPH---VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
DP+ VV+L+D + G V +VFE + L K+I + + +PV VKS++
Sbjct: 90 SDPNKDMVVQLIDDFKISGMNGIHVC-MVFEVLGHHLLKWI--IKSNYQGLPVRCVKSII 146
Query: 119 YQLCKGVAFCHGHG-ILHRDLKPHNLLM-------------------------------- 145
Q+ +G+ + H I+H D+KP N+LM
Sbjct: 147 RQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVST 206
Query: 146 --------------DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHY 191
+ + +KIADLG A K +T +I T YR+ EVL+G+ Y
Sbjct: 207 APAADLLVNPLDPRNADKIRVKIADLGNA---CWVHKHFTEDIQTRQYRSIEVLIGAG-Y 262
Query: 192 STAVDMWSVACIFAELVTKTALFPGDS------ELQQLLHIFRLLGT-PNEKVWPGVSSL 244
ST D+WS AC+ EL T LF S + + HI LLG+ P G S
Sbjct: 263 STPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSR 322
Query: 245 MNWH------EYPQWNPQSLATAV------PNLDKDGL-DLLEQMLQYDPSKRISAKKAM 291
++ + P SL + P+ D D L ML+ P KR SA + +
Sbjct: 323 EFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECL 382
Query: 292 EHPYFD 297
HP+ +
Sbjct: 383 RHPWLN 388
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ V ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 75
Query: 71 DVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y + +L KYIR E + ++ + + H
Sbjct: 76 FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 126
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K+ T Y +PE+L
Sbjct: 127 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 185
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+ ++ D+W++ CI +LV F +E I +L EK +P
Sbjct: 186 KSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----- 239
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 240 -----------------------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 274
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ V ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 74
Query: 71 DVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y + +L KYIR E + ++ + + H
Sbjct: 75 FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 125
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K+ T Y +PE+L
Sbjct: 126 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 184
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+ ++ D+W++ CI +LV F +E I +L EK +P
Sbjct: 185 KSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----- 238
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 239 -----------------------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 273
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 137/301 (45%), Gaps = 42/301 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D ++ E++G G + V + REK+TG A +KK R GV + REVSIL
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ + + P+V+ L +V E +T + L+ E + + F E++
Sbjct: 69 KEI-QHPNVITLHEVY-----ENKTDVILIGELV---AGGELFDFLAEKESLTEEEATEF 119
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N +L+DR +KI D GLA ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF 178
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F GD++ + L ++
Sbjct: 179 GTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
S +N+ ++ + A A D + ++L DP KR++ + +++HP
Sbjct: 230 --------SAVNYEFEDEYFSNTSALAK--------DFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 295 Y 295
+
Sbjct: 274 W 274
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ V ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 95
Query: 71 DVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y + +L KYIR E + ++ + + H
Sbjct: 96 FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 146
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K+ T Y +PE+L
Sbjct: 147 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+ ++ D+W++ CI +LV F +E I +L EK +P
Sbjct: 206 KSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----- 259
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 260 -----------------------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 294
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ V ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 98
Query: 71 DVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y + +L KYIR E + ++ + + H
Sbjct: 99 FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 149
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K+ T Y +PE+L
Sbjct: 150 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+ ++ D+W++ CI +LV F +E I +L EK +P
Sbjct: 209 KSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----- 262
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 263 -----------------------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 297
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ V ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 98
Query: 71 DVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y + +L KYIR E + ++ + + H
Sbjct: 99 FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 149
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K+ T Y +PE+L
Sbjct: 150 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+ ++ D+W++ CI +LV F +E I +L EK +P
Sbjct: 209 KSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----- 262
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 263 -----------------------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 297
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ V ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 80
Query: 71 DVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y + +L KYIR E + ++ + + H
Sbjct: 81 FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 131
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K+ T Y +PE+L
Sbjct: 132 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+ ++ D+W++ CI +LV F +E I +L EK +P
Sbjct: 191 KSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----- 244
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 245 -----------------------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 279
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ V ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 73
Query: 71 DVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y + +L KYIR E + ++ + + H
Sbjct: 74 FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 124
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K+ T Y +PE+L
Sbjct: 125 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 183
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+ ++ D+W++ CI +LV F +E I +L EK +P
Sbjct: 184 KSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----- 237
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 238 -----------------------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 272
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ V ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 76
Query: 71 DVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y + +L KYIR E + ++ + + H
Sbjct: 77 FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 127
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K+ T Y +PE+L
Sbjct: 128 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 186
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+ ++ D+W++ CI +LV F +E I +L EK +P
Sbjct: 187 KSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----- 240
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 241 -----------------------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 275
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 125/299 (41%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ V ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 98
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y L KYIR E + ++ + + H
Sbjct: 99 FTFQDDEK-----LYFGLSYAKNGCLLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 149
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIK--KYTHEILTLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K + + T Y +PE LL
Sbjct: 150 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE-LLT 207
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
S + D+W++ CI +LV F +E I +L EK +P
Sbjct: 208 EKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----- 262
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 263 -----------------------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 297
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ V ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 99
Query: 71 DVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y + +L KYIR E + ++ + + H
Sbjct: 100 FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 150
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K+ T Y +PE+L
Sbjct: 151 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+ ++ D+W++ CI +LV F +E I +L EK +P
Sbjct: 210 KSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----- 263
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 264 -----------------------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 298
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ V ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 103
Query: 71 DVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y + +L KYIR E + ++ + + H
Sbjct: 104 FCFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 154
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K+ T Y +PE+L
Sbjct: 155 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+ ++ D+W++ CI +LV F +E I +L EK +P
Sbjct: 214 KSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----- 267
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 268 -----------------------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 302
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ V ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 95
Query: 71 DVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y + +L KYIR E + ++ + + H
Sbjct: 96 FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 146
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIK--KYTHEILTLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K + + T Y +PE+L
Sbjct: 147 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+ ++ D+W++ CI +LV F +E I +L EK +P
Sbjct: 206 KSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----- 259
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 260 -----------------------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 294
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ V ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 96
Query: 71 DVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y + +L KYIR E + ++ + + H
Sbjct: 97 FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 147
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K+ T Y +PE+L
Sbjct: 148 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+ ++ D+W++ CI +LV F +E I +L EK +P
Sbjct: 207 KSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----- 260
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 261 -----------------------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 295
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ V ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 99
Query: 71 DVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y + +L KYIR E + ++ + + H
Sbjct: 100 FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 150
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIK--KYTHEILTLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K + + T Y +PE+L
Sbjct: 151 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+ ++ D+W++ CI +LV F +E I +L EK +P
Sbjct: 210 KSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----- 263
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 264 -----------------------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 298
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ V ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 96
Query: 71 DVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y + +L KYIR E + ++ + + H
Sbjct: 97 FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 147
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K+ T Y +PE+L
Sbjct: 148 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+ ++ D+W++ CI +LV F +E I +L EK +P
Sbjct: 207 KSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----- 260
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 261 -----------------------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 295
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ V ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 98
Query: 71 DVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y + +L KYIR E + ++ + + H
Sbjct: 99 FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 149
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K+ T Y +PE+L
Sbjct: 150 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+ ++ D+W++ CI +LV F +E I +L EK +P
Sbjct: 209 KSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----- 262
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 263 -----------------------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 297
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ V ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 98
Query: 71 DVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y + +L KYIR E + ++ + + H
Sbjct: 99 FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 149
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K+ T Y +PE+L
Sbjct: 150 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+ ++ D+W++ CI +LV F +E I +L EK +P
Sbjct: 209 KSAXKSS-DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKAR----- 262
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 263 -----------------------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 297
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 130/306 (42%), Gaps = 56/306 (18%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
+ D ++ + +G G + +V A +K T K+VA+K E EG + E+++L +
Sbjct: 16 IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIK-CIAKEALEGKEGSMENEIAVLHKI- 73
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVF------EYMDTDLKKYIRSFRQTGENIPVNTVK 115
+ P++V L D+ + LYL+ E D ++K + R
Sbjct: 74 KHPNIVALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASR-------- 120
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLM-----DRKTMTLKIADLGLARAFTLPIKKY 170
L++Q+ V + H GI+HRDLKP NLL D K M I+D GL++ P
Sbjct: 121 -LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM---ISDFGLSK-MEDPGSVL 175
Query: 171 THEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLL 230
+ T Y APEV L YS AVD WS+ I L+ F +++ + I +
Sbjct: 176 STACGTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
Query: 231 GTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKA 290
+ W +S D + +++ DP KR + ++A
Sbjct: 235 YEFDSPYWDDISDSAK------------------------DFIRHLMEKDPEKRFTCEQA 270
Query: 291 MEHPYF 296
++HP+
Sbjct: 271 LQHPWI 276
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ V ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 98
Query: 71 DVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y + +L KYIR E + ++ + + H
Sbjct: 99 FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 149
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K+ T Y +PE+L
Sbjct: 150 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+ ++ D+W++ CI +LV F +E I +L EK +P
Sbjct: 209 KSACKSS-DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKAR----- 262
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 263 -----------------------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 297
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 130/306 (42%), Gaps = 56/306 (18%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
+ D ++ + +G G + +V A +K T K+VA+K E EG + E+++L +
Sbjct: 16 IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIK-CIAKEALEGKEGSMENEIAVLHKI- 73
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVF------EYMDTDLKKYIRSFRQTGENIPVNTVK 115
+ P++V L D+ + LYL+ E D ++K + R
Sbjct: 74 KHPNIVALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASR-------- 120
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLM-----DRKTMTLKIADLGLARAFTLPIKKY 170
L++Q+ V + H GI+HRDLKP NLL D K M I+D GL++ P
Sbjct: 121 -LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM---ISDFGLSK-MEDPGSVL 175
Query: 171 THEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLL 230
+ T Y APEV L YS AVD WS+ I L+ F +++ + I +
Sbjct: 176 STACGTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
Query: 231 GTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKA 290
+ W +S D + +++ DP KR + ++A
Sbjct: 235 YEFDSPYWDDISDSAK------------------------DFIRHLMEKDPEKRFTCEQA 270
Query: 291 MEHPYF 296
++HP+
Sbjct: 271 LQHPWI 276
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 140/301 (46%), Gaps = 52/301 (17%)
Query: 6 FEKLEKVGEGTYGKVYR-----AREKATGKIVALKK--TRLHEDDEGVPPTTLREVSILR 58
++ E++G+G + V R A ++ KI+ KK R H+ E RE I R
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLE-------REARICR 76
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSL 117
+L + P++VRL D ++EG YL+F+ + +L + I + E + ++
Sbjct: 77 LL-KHPNIVRLHD---SISEEGHH--YLIFDLVTGGELFEDIVAREYYSEADASHCIQ-- 128
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDR--KTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + V CH G++HRDLKP NLL+ K +K+AD GLA + +
Sbjct: 129 --QILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAG 186
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
T Y +PEVL Y VD+W+ I L+ F D + +L +
Sbjct: 187 TPGYLSPEVLRKDP-YGKPVDLWACGVILYILLVGYPPF-WDEDQHRLY----------Q 234
Query: 236 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
++ G + P+W+ T P + DL+ +ML +PSKRI+A +A++HP+
Sbjct: 235 QIKAGAYDFPS----PEWD-----TVTP----EAKDLINKMLTINPSKRITAAEALKHPW 281
Query: 296 F 296
Sbjct: 282 I 282
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 130/306 (42%), Gaps = 56/306 (18%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
+ D ++ + +G G + +V A +K T K+VA+K E EG + E+++L +
Sbjct: 16 IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIK-CIAKEALEGKEGSMENEIAVLHKI- 73
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVF------EYMDTDLKKYIRSFRQTGENIPVNTVK 115
+ P++V L D+ + LYL+ E D ++K + R
Sbjct: 74 KHPNIVALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASR-------- 120
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLM-----DRKTMTLKIADLGLARAFTLPIKKY 170
L++Q+ V + H GI+HRDLKP NLL D K M I+D GL++ P
Sbjct: 121 -LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM---ISDFGLSK-MEDPGSVL 175
Query: 171 THEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLL 230
+ T Y APEV L YS AVD WS+ I L+ F +++ + I +
Sbjct: 176 STACGTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
Query: 231 GTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKA 290
+ W +S D + +++ DP KR + ++A
Sbjct: 235 YEFDSPYWDDISD------------------------SAKDFIRHLMEKDPEKRFTCEQA 270
Query: 291 MEHPYF 296
++HP+
Sbjct: 271 LQHPWI 276
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 131/310 (42%), Gaps = 57/310 (18%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D +E E +G G+Y R KAT A+K + D PT E+ IL +
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PT--EEIEILLRYGQH 75
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYM------DTDLKKYIRSFRQTGENIPVNTVKSL 117
P+++ L DV +G+ V Y+V E M D L++ S R+ ++
Sbjct: 76 PNIITLKDVYD----DGKYV-YVVTELMKGGELLDKILRQKFFSEREA---------SAV 121
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT---MTLKIADLGLARAFTLPIKKYTHEI 174
++ + K V + H G++HRDLKP N+L ++ +++I D G A+
Sbjct: 122 LFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPC 181
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APEV L Y A D+WS+ + ++T F + TP
Sbjct: 182 YTANFVAPEV-LERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD-----------DTPE 229
Query: 235 E---KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAM 291
E ++ G SL + WN ++ DL+ +ML DP +R++A +
Sbjct: 230 EILARIGSGKFSLSGGY----WN---------SVSDTAKDLVSKMLHVDPHQRLTAALVL 276
Query: 292 EHPYFDDLDK 301
HP+ D+
Sbjct: 277 RHPWIVHWDQ 286
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 138/308 (44%), Gaps = 56/308 (18%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK-----KTRLHEDDEGVPPTTLR-EVSILRMLSRDPH 65
+G G G+V A E+ T K VA++ K + E P + E+ IL+ L+ P
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH-PC 215
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTD--LKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
++++ + ++ Y+V E M+ K + + R + T K YQ+
Sbjct: 216 IIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKR-----LKEATCKLYFYQMLL 264
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEILTLW--- 178
V + H +GI+HRDLKP N+L+ + +KI D G ++ I T + TL
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-----ILGETSLMRTLCGTP 319
Query: 179 -YRAPEVL--LGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
Y APEVL +G+ Y+ AVD WS+ I L + +P SE + + + + +
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSEHRTQVSLKDQITSGKY 376
Query: 236 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
P V W E + + LDL++++L DP R + ++A+ HP+
Sbjct: 377 NFIPEV-----WAE---------------VSEKALDLVKKLLVVDPKARFTTEEALRHPW 416
Query: 296 FDDLDKTR 303
D D R
Sbjct: 417 LQDEDMKR 424
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 138/308 (44%), Gaps = 56/308 (18%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK-----KTRLHEDDEGVPPTTLR-EVSILRMLSRDPH 65
+G G G+V A E+ T K VA++ K + E P + E+ IL+ L+ P
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH-PC 201
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTD--LKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
++++ + ++ Y+V E M+ K + + R + T K YQ+
Sbjct: 202 IIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKR-----LKEATCKLYFYQMLL 250
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEILTLW--- 178
V + H +GI+HRDLKP N+L+ + +KI D G ++ I T + TL
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-----ILGETSLMRTLCGTP 305
Query: 179 -YRAPEVL--LGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
Y APEVL +G+ Y+ AVD WS+ I L + +P SE + + + + +
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSEHRTQVSLKDQITSGKY 362
Query: 236 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
P V W E + + LDL++++L DP R + ++A+ HP+
Sbjct: 363 NFIPEV-----WAE---------------VSEKALDLVKKLLVVDPKARFTTEEALRHPW 402
Query: 296 FDDLDKTR 303
D D R
Sbjct: 403 LQDEDMKR 410
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 31/226 (13%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
FE++ +G+G +G+V +AR + A+KK R E+ T L EV +L L+ +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK---LSTILSEVXLLASLNHQ-Y 63
Query: 66 VVRLMD--------VKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKS 116
VVR VK + ++ L++ EY + L I S N +
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHS---ENLNQQRDEYWR 120
Query: 117 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKK----- 169
L Q+ + +++ H GI+HR+LKP N+ +D ++ +KI D GLA+ +L I K
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 170 -------YTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELV 208
T I T Y A EVL G+ HY+ +D +S+ IF E +
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 130/299 (43%), Gaps = 62/299 (20%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTL-------REVSILRMLSRDP 64
+G G++G+V KI K TR+ + +P + +E+ I++ L P
Sbjct: 34 IGRGSWGEV---------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDH-P 83
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYI---RSFRQTGENIPVNTVKSLMYQ 120
+++RL + E T +YLV E +L + + R FR++ +M
Sbjct: 84 NIIRLY-----ETFEDNTDIYLVMELCTGGELFERVVHKRVFRES-------DAARIMKD 131
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+ VA+CH + HRDLKP N L D LK+ D GLA F P K ++ T +
Sbjct: 132 VLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK-PGKMMRTKVGTPY 190
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y +P+VL G Y D WS + L+ F ++ + +L I T EK W
Sbjct: 191 YVSPQVLEG--LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDW 248
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
VS PQ+ + L+ ++L P +RI++ +A+EH +F+
Sbjct: 249 LNVS------------PQAES------------LIRRLLTKSPKQRITSLQALEHEWFE 283
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 130/299 (43%), Gaps = 62/299 (20%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTL-------REVSILRMLSRDP 64
+G G++G+V KI K TR+ + +P + +E+ I++ L P
Sbjct: 17 IGRGSWGEV---------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDH-P 66
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYI---RSFRQTGENIPVNTVKSLMYQ 120
+++RL + E T +YLV E +L + + R FR++ +M
Sbjct: 67 NIIRLY-----ETFEDNTDIYLVMELCTGGELFERVVHKRVFRES-------DAARIMKD 114
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+ VA+CH + HRDLKP N L D LK+ D GLA F P K ++ T +
Sbjct: 115 VLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK-PGKMMRTKVGTPY 173
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y +P+VL G Y D WS + L+ F ++ + +L I T EK W
Sbjct: 174 YVSPQVLEG--LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDW 231
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
VS PQ+ + L+ ++L P +RI++ +A+EH +F+
Sbjct: 232 LNVS------------PQAES------------LIRRLLTKSPKQRITSLQALEHEWFE 266
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 139/302 (46%), Gaps = 52/302 (17%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATG-----KIVALKK--TRLHEDDEGVPPTTLREVSI 56
D ++ E +G+G + V R + TG KI+ KK R H+ E RE I
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLE-------REARI 56
Query: 57 LRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
R+L + ++VRL D ++EG YLVF+ + +L + I + E + ++
Sbjct: 57 CRLL-KHSNIVRLHD---SISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ 110
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHE 173
Q+ + V CH G++HRDLKP NLL+ K +K+AD GLA + +
Sbjct: 111 ----QILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGF 166
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 233
T Y +PEVL Y VD+W+ I L+ F D + +L
Sbjct: 167 AGTPGYLSPEVLRKEA-YGKPVDIWACGVILYILLVGYPPF-WDEDQHKLY--------- 215
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
+++ G + P+W+ T P + +L+ QML +P+KRI+A +A++H
Sbjct: 216 -QQIKAGAYDFPS----PEWD-----TVTP----EAKNLINQMLTINPAKRITAHEALKH 261
Query: 294 PY 295
P+
Sbjct: 262 PW 263
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 137/306 (44%), Gaps = 42/306 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D ++ E++G G + V + REK+TG A +KK + GV + REVSIL
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSIL 69
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
R + P+++ L DV E RT + L+ E + + F E++ S
Sbjct: 70 RQVLH-PNIITLHDVY-----ENRTDVVLILELVSGG---ELFDFLAQKESLSEEEATSF 120
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMT---LKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N+++ K + +K+ D GLA + ++ +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKNIF 179
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F GD++ + L +I + +
Sbjct: 180 GTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD 238
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
E+ + S L D + ++L + KR++ ++A+ HP
Sbjct: 239 EEFFSQTSELAK------------------------DFIRKLLVKETRKRLTIQEALRHP 274
Query: 295 YFDDLD 300
+ +D
Sbjct: 275 WITPVD 280
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 134/299 (44%), Gaps = 48/299 (16%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSIL 57
+D FE +G+G +G VY AREK + IVALK K+++ + EGV RE+ I
Sbjct: 20 FTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQI--EKEGVEHQLRREIEIQ 77
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKS 116
L P+++RL + + + +YL+ EY +L K + Q +
Sbjct: 78 AHLHH-PNILRLYNYFYDRRR-----IYLILEYAPRGELYKEL----QKSCTFDEQRTAT 127
Query: 117 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT 176
+M +L + +CHG ++HRD+KP NLL+ LKIAD G + P + T
Sbjct: 128 IMEELADALMYCHGKKVIHRDIKPENLLLG-LKGELKIADFGW--SVHAPSLRRKTMCGT 184
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEK 236
L Y PE++ G H + VD+W + + EL+ F S NE
Sbjct: 185 LDYLPPEMIEGRMH-NEKVDLWCIGVLCYELLVGNPPFESASH--------------NET 229
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
V + + P S+ T DL+ ++L+++PS+R+ + HP+
Sbjct: 230 YRRIVKVDLKF-------PASVPTG-------AQDLISKLLRHNPSERLPLAQVSAHPW 274
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 131/303 (43%), Gaps = 54/303 (17%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKA-----TGKIVALKK--TRLHEDDEGVPPTTLREVSI 56
D ++ E++G+G + V R +K KI+ KK R H+ E RE I
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLE-------REARI 83
Query: 57 LRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQ--TGENIPVNTV 114
R+L + P++VRL D ++EG F Y+ DL F E
Sbjct: 84 CRLL-KHPNIVRLHD---SISEEG-------FHYLVFDLVTGGELFEDIVAREYYSEADA 132
Query: 115 KSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTH 172
++Q+ + V H H I+HRDLKP NLL+ K +K+AD GLA + +
Sbjct: 133 SHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG 192
Query: 173 EILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT 232
T Y +PEVL Y VD+W+ I L+ F + +
Sbjct: 193 FAGTPGYLSPEVLRKDP-YGKPVDIWACGVILYILLVGYPPFWDEDQ------------- 238
Query: 233 PNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME 292
K++ + + P+W+ T P + +L+ QML +P+KRI+A +A++
Sbjct: 239 --HKLYQQIKAGAYDFPSPEWD-----TVTP----EAKNLINQMLTINPAKRITADQALK 287
Query: 293 HPY 295
HP+
Sbjct: 288 HPW 290
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 126/299 (42%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 96
Query: 71 DVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y + +L KYIR E + ++ + + H
Sbjct: 97 FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 147
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K+ T Y +PE+L
Sbjct: 148 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+ ++ D+W++ CI +LV F +E I +L EK +P
Sbjct: 207 KSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----- 260
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 261 -----------------------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 295
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLR---EVSILRMLSR 62
+E E++G G +G V R + TG+ VA+K+ R E P R E+ I++ L+
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCR----QELSPKNRERWCLEIQIMKKLNH 72
Query: 63 DPHVVRLMDVKQGQNKEGRTVL-YLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQ 120
P+VV +V G K L L EY + DL+KY+ F + +++L+
Sbjct: 73 -PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCC-GLKEGPIRTLLSD 130
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTL--KIADLGLARAFTLPIKKYTHEILTLW 178
+ + + H + I+HRDLKP N+++ L KI DLG A+ + T + TL
Sbjct: 131 ISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG-ELCTEFVGTLQ 189
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
Y APE LL Y+ VD WS + E +T
Sbjct: 190 YLAPE-LLEQKKYTVTVDYWSFGTLAFECIT 219
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLR---EVSILRMLSR 62
+E E++G G +G V R + TG+ VA+K+ R E P R E+ I++ L+
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCR----QELSPKNRERWCLEIQIMKKLNH 71
Query: 63 DPHVVRLMDVKQGQNKEGRTVL-YLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQ 120
P+VV +V G K L L EY + DL+KY+ F + +++L+
Sbjct: 72 -PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCC-GLKEGPIRTLLSD 129
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTL--KIADLGLARAFTLPIKKYTHEILTLW 178
+ + + H + I+HRDLKP N+++ L KI DLG A+ + T + TL
Sbjct: 130 ISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG-ELCTEFVGTLQ 188
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
Y APE LL Y+ VD WS + E +T
Sbjct: 189 YLAPE-LLEQKKYTVTVDYWSFGTLAFECIT 218
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 131/309 (42%), Gaps = 62/309 (20%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILR 58
+ D ++ + +G G + +V A +K T K+VA+K K L EG + E+++L
Sbjct: 16 IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL----EGKEGSMENEIAVLH 71
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVF------EYMDTDLKKYIRSFRQTGENIPVN 112
+ + P++V L D+ + LYL+ E D ++K + R
Sbjct: 72 KI-KHPNIVALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASR----- 120
Query: 113 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM-----DRKTMTLKIADLGLARAFTLPI 167
L++Q+ V + H GI+HRDLKP NLL D K M I+D GL++ P
Sbjct: 121 ----LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM---ISDFGLSK-MEDPG 172
Query: 168 KKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIF 227
+ T Y APEV L YS AVD WS+ I L+ F +++ + I
Sbjct: 173 SVLSTACGTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
Query: 228 RLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISA 287
+ + W +S D + +++ DP KR +
Sbjct: 232 KAEYEFDSPYWDDISDSAK------------------------DFIRHLMEKDPEKRFTC 267
Query: 288 KKAMEHPYF 296
++A++HP+
Sbjct: 268 EQALQHPWI 276
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 129/299 (43%), Gaps = 52/299 (17%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKK-TRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+GEG++ V ARE AT + A+K + H E P RE ++ L P V+L
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLY 101
Query: 71 DVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
Q K LY Y + +L KYIR E + ++ + + H
Sbjct: 102 FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 152
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLG 187
G GI+HRDLKP N+L++ + M ++I D G A+ + K+ T Y +PE+L
Sbjct: 153 GKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 188 STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW 247
+ ++ D+W++ CI +LV F +E I +L
Sbjct: 212 KSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------E 253
Query: 248 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 299
+++P A P DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 254 YDFP-------AAFFPK----ARDLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 300
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 129/308 (41%), Gaps = 53/308 (17%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D + E +G G+Y + R KAT A+K + D E+ IL +
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPS------EEIEILLRYGQH 80
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYM------DTDLKKYIRSFRQTGENIPVNTVKSL 117
P+++ L DV +G+ V YLV E M D L++ S R+ +
Sbjct: 81 PNIITLKDVYD----DGKHV-YLVTELMRGGELLDKILRQKFFSERE---------ASFV 126
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMT---LKIADLGLARAFTLPIKKYTHEI 174
++ + K V + H G++HRDLKP N+L ++ L+I D G A+
Sbjct: 127 LHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACI-FAELVTKTALFPGDSELQQLLHIFRLLGTP 233
T + APEVL Y D+WS+ + + L T G S+ + I +G+
Sbjct: 187 YTANFVAPEVL-KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE--EILTRIGSG 243
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
+ G NW+ + + DL+ +ML DP +R++AK+ ++H
Sbjct: 244 KFTLSGG-----NWN---------------TVSETAKDLVSKMLHVDPHQRLTAKQVLQH 283
Query: 294 PYFDDLDK 301
P+ DK
Sbjct: 284 PWVTQKDK 291
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 130/311 (41%), Gaps = 59/311 (18%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D + E +G G+Y + R KAT A+K + D E+ IL +
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPS------EEIEILLRYGQH 80
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYM------DTDLKKYIRSFRQTGENIPVNTVKSL 117
P+++ L DV +G+ V YLV E M D L++ S R+ +
Sbjct: 81 PNIITLKDVYD----DGKHV-YLVTELMRGGELLDKILRQKFFSERE---------ASFV 126
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMT---LKIADLGLARAFTLPIKKYTHEI 174
++ + K V + H G++HRDLKP N+L ++ L+I D G A+
Sbjct: 127 LHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACI-FAELVTKTALFPGDSELQQLLHIFRLLGTP 233
T + APEVL Y D+WS+ + + L T G S+ TP
Sbjct: 187 YTANFVAPEVL-KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSD------------TP 233
Query: 234 NE---KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKA 290
E ++ G +L + WN + + DL+ +ML DP +R++AK+
Sbjct: 234 EEILTRIGSGKFTLSGGN----WN---------TVSETAKDLVSKMLHVDPHQRLTAKQV 280
Query: 291 MEHPYFDDLDK 301
++HP+ DK
Sbjct: 281 LQHPWVTQKDK 291
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 129/287 (44%), Gaps = 41/287 (14%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+GEG+ G V AREK +G+ VA+K L + EV I+R V
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR--ELLFNEVVIMRDYQHFNVVEMYK 109
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G+ L+++ E++ L + R E I ++ + + +A+ H
Sbjct: 110 SYLVGEE------LWVLMEFLQGGALTDIVSQVRLNEEQI-----ATVCEAVLQALAYLH 158
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
G++HRD+K ++L+ +K++D G + + K + T ++ APEV+ +
Sbjct: 159 AQGVIHRDIKSDSILLTLDG-RVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVI-SRS 216
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 249
Y+T VD+WS+ + E+V + DS +Q + RL +P K L N H+
Sbjct: 217 LYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK---RLRDSPPPK-------LKNSHK 266
Query: 250 YPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P L D LE+ML DP +R +A++ ++HP+
Sbjct: 267 VS-----------PVLR----DFLERMLVRDPQERATAQELLDHPFL 298
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 137/295 (46%), Gaps = 47/295 (15%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ + EK+G+G G VY A + ATG+ VA+++ L + + + E+ ++R +++P+
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRE-NKNPN 78
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMD----TDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
+V +D ++ L++V EY+ TD+ + G+ + ++ +
Sbjct: 79 IVNYLDSYLVGDE-----LWVVMEYLAGGSLTDV--VTETCMDEGQ------IAAVCREC 125
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
+ + F H + ++HRD+K N+L+ ++K+ D G T K + + T ++ A
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSXMVGTPYWMA 184
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PEV+ Y VD+WS+ + E++ + ++ L+ L++ GTP +
Sbjct: 185 PEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTPELQ----- 237
Query: 242 SSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
NP+ L+ D L + L+ D KR SAK+ ++H +
Sbjct: 238 ------------NPEKLSAIF-------RDFLNRCLEMDVEKRGSAKELLQHQFL 273
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 137/295 (46%), Gaps = 47/295 (15%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ + EK+G+G G VY A + ATG+ VA+++ L + + + E+ ++R +++P+
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRE-NKNPN 79
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMD----TDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
+V +D ++ L++V EY+ TD+ + G+ + ++ +
Sbjct: 80 IVNYLDSYLVGDE-----LWVVMEYLAGGSLTDV--VTETCMDEGQ------IAAVCREC 126
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
+ + F H + ++HRD+K N+L+ ++K+ D G T K + + T ++ A
Sbjct: 127 LQALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSXMVGTPYWMA 185
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PEV+ Y VD+WS+ + E++ + ++ L+ L++ GTP +
Sbjct: 186 PEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTPELQ----- 238
Query: 242 SSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
NP+ L+ D L + L+ D KR SAK+ ++H +
Sbjct: 239 ------------NPEKLSAIF-------RDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 136/295 (46%), Gaps = 47/295 (15%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ + EK+G+G G VY A + ATG+ VA+++ L + + + E+ ++R +++P+
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRE-NKNPN 78
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMD----TDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
+V +D ++ L++V EY+ TD+ + G+ + ++ +
Sbjct: 79 IVNYLDSYLVGDE-----LWVVMEYLAGGSLTDV--VTETCMDEGQ------IAAVCREC 125
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
+ + F H + ++HRD+K N+L+ ++K+ D G T K + + T ++ A
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSEMVGTPYWMA 184
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PEV+ Y VD+WS+ + E++ + ++ L+ L++ GTP +
Sbjct: 185 PEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTPELQ----- 237
Query: 242 SSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
NP+ L+ D L + L D KR SAK+ ++H +
Sbjct: 238 ------------NPEKLSAIF-------RDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 130/303 (42%), Gaps = 58/303 (19%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILRMLSR 62
FE E +G G + +V A EKATGK+ A+K K L +G + E+++LR +
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL----KGKESSIENEIAVLRKIKH 79
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVF------EYMDTDLKKYIRSFRQTGENIPVNTVKS 116
+ ++V L D+ + N LYLV E D ++K + + +
Sbjct: 80 E-NIVALEDIYESPNH-----LYLVMQLVSGGELFDRIVEKGFYTEKDAS---------T 124
Query: 117 LMYQLCKGVAFCHGHGILHRDLKPHNLL---MDRKTMTLKIADLGLARAFTLPIKKYTHE 173
L+ Q+ V + H GI+HRDLKP NLL D ++ + I+D GL++ +
Sbjct: 125 LIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIM-ISDFGLSK-MEGKGDVMSTA 182
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 233
T Y APEV L YS AVD WS+ I L+ F +++ + I +
Sbjct: 183 CGTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEF 241
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
+ W +S D + +++ DP+KR + ++A H
Sbjct: 242 DSPYWDDISD------------------------SAKDFIRNLMEKDPNKRYTCEQAARH 277
Query: 294 PYF 296
P+
Sbjct: 278 PWI 280
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 137/304 (45%), Gaps = 55/304 (18%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATG-----KIVALKKTRLHEDDEGVPPTTLREVSILR 58
D ++ E++G+G + V R K TG KI+ KK + + RE I R
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-----LEREARICR 83
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYI--RSFRQTGENIPVNTVK 115
L + P++VRL D Q + + YLVF+ + +L + I R F +
Sbjct: 84 KL-QHPNIVRLHDSIQEE-----SFHYLVFDLVTGGELFEDIVAREFYSEAD------AS 131
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHE 173
+ Q+ + +A+CH +GI+HR+LKP NLL+ K +K+AD GL A + + H
Sbjct: 132 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL--AIEVNDSEAWHG 189
Query: 174 IL-TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT 232
T Y +PEVL YS VD+W+ I L+ F + +
Sbjct: 190 FAGTPGYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQ------------- 235
Query: 233 PNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME 292
+++ + + + P+W+ T P + L++ ML +P KRI+A +A++
Sbjct: 236 --HRLYAQIKAGAYDYPSPEWD-----TVTP----EAKSLIDSMLTVNPKKRITADQALK 284
Query: 293 HPYF 296
P+
Sbjct: 285 VPWI 288
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 135/305 (44%), Gaps = 54/305 (17%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLR-EVSILRML 60
+ F +E +G G + +V+ +++ TGK+ ALK + ++L E+++L+ +
Sbjct: 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIK---KSPAFRDSSLENEIAVLKKI 63
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVF------EYMDTDLKKYIRSFRQTGENIPVNTV 114
+ ++V L D+ E T YLV E D L++ + + +
Sbjct: 64 KHE-NIVTLEDIY-----ESTTHYYLVMQLVSGGELFDRILERGVYTEKDAS-------- 109
Query: 115 KSLMYQLCKGVAFCHGHGILHRDLKPHNL--LMDRKTMTLKIADLGLARAFTLPIKKYTH 172
++ Q+ V + H +GI+HRDLKP NL L + + I D GL++ I +
Sbjct: 110 -LVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI--MST 166
Query: 173 EILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT 232
T Y APEV L YS AVD WS+ I L+ F ++E +
Sbjct: 167 ACGTPGYVAPEV-LAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLF--------- 216
Query: 233 PNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME 292
EK+ G E P W+ ++ + D + +L+ DP++R + +KA+
Sbjct: 217 --EKIKEGYYEF----ESPFWD---------DISESAKDFICHLLEKDPNERYTCEKALS 261
Query: 293 HPYFD 297
HP+ D
Sbjct: 262 HPWID 266
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 137/309 (44%), Gaps = 42/309 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D ++ E++G G + V + REK+TG A +KK + GV + REVSIL
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
R + +V+ L DV E RT + L+ E + + F E++ S
Sbjct: 70 RQVLHH-NVITLHDVY-----ENRTDVVLILELVSGG---ELFDFLAQKESLSEEEATSF 120
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMT---LKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N+++ K + +K+ D GLA + ++ +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKNIF 179
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F GD++ + L +I + +
Sbjct: 180 GTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD 238
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
E+ + S L D + ++L + KR++ ++A+ HP
Sbjct: 239 EEFFSHTSELAK------------------------DFIRKLLVKETRKRLTIQEALRHP 274
Query: 295 YFDDLDKTR 303
+ +D +
Sbjct: 275 WITPVDNQQ 283
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 137/309 (44%), Gaps = 42/309 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D ++ E++G G + V + REK+TG A +KK + GV + REVSIL
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
R + +V+ L DV E RT + L+ E + + F E++ S
Sbjct: 70 RQVLHH-NVITLHDVY-----ENRTDVVLILELVSGG---ELFDFLAQKESLSEEEATSF 120
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMT---LKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N+++ K + +K+ D GLA + ++ +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKNIF 179
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F GD++ + L +I + +
Sbjct: 180 GTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD 238
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
E+ + S L D + ++L + KR++ ++A+ HP
Sbjct: 239 EEFFSQTSELAK------------------------DFIRKLLVKETRKRLTIQEALRHP 274
Query: 295 YFDDLDKTR 303
+ +D +
Sbjct: 275 WITPVDNQQ 283
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 137/309 (44%), Gaps = 42/309 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D ++ E++G G + V + REK+TG A +KK + GV + REVSIL
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
R + +V+ L DV E RT + L+ E + + F E++ S
Sbjct: 70 RQVLHH-NVITLHDVY-----ENRTDVVLILELVSGG---ELFDFLAQKESLSEEEATSF 120
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMT---LKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N+++ K + +K+ D GLA + ++ +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKNIF 179
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F GD++ + L +I + +
Sbjct: 180 GTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD 238
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
E+ + S L D + ++L + KR++ ++A+ HP
Sbjct: 239 EEFFSHTSELAK------------------------DFIRKLLVKETRKRLTIQEALRHP 274
Query: 295 YFDDLDKTR 303
+ +D +
Sbjct: 275 WITPVDNQQ 283
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 137/304 (45%), Gaps = 55/304 (18%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATG-----KIVALKKTRLHEDDEGVPPTTLREVSILR 58
D ++ E++G+G + V R K TG KI+ KK + + RE I R
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-----LEREARICR 59
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYI--RSFRQTGENIPVNTVK 115
L + P++VRL D Q + + YLVF+ + +L + I R F +
Sbjct: 60 KL-QHPNIVRLHDSIQEE-----SFHYLVFDLVTGGELFEDIVAREFYSEAD------AS 107
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHE 173
+ Q+ + +A+CH +GI+HR+LKP NLL+ K +K+AD GL A + + H
Sbjct: 108 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL--AIEVNDSEAWHG 165
Query: 174 IL-TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT 232
T Y +PEVL YS VD+W+ I L+ F + +
Sbjct: 166 FAGTPGYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQ------------- 211
Query: 233 PNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME 292
+++ + + + P+W+ T P + L++ ML +P KRI+A +A++
Sbjct: 212 --HRLYAQIKAGAYDYPSPEWD-----TVTP----EAKSLIDSMLTVNPKKRITADQALK 260
Query: 293 HPYF 296
P+
Sbjct: 261 VPWI 264
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 136/295 (46%), Gaps = 47/295 (15%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ + EK+G+G G VY A + ATG+ VA+++ L + + + E+ ++R +++P+
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRE-NKNPN 78
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMD----TDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
+V +D ++ L++V EY+ TD+ + G+ + ++ +
Sbjct: 79 IVNYLDSYLVGDE-----LWVVMEYLAGGSLTDV--VTETCMDEGQ------IAAVCREC 125
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
+ + F H + ++HRD+K N+L+ ++K+ D G T K + + T ++ A
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSTMVGTPYWMA 184
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PEV+ Y VD+WS+ + E++ + ++ L+ L++ GTP +
Sbjct: 185 PEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTPELQ----- 237
Query: 242 SSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
NP+ L+ D L + L D KR SAK+ ++H +
Sbjct: 238 ------------NPEKLSAIF-------RDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 137/309 (44%), Gaps = 42/309 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D ++ E++G G + V + REK+TG A +KK + GV + REVSIL
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
R + +V+ L DV E RT + L+ E + + F E++ S
Sbjct: 70 RQVLHH-NVITLHDVY-----ENRTDVVLILELVSGG---ELFDFLAQKESLSEEEATSF 120
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMT---LKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N+++ K + +K+ D GLA + ++ +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKNIF 179
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F GD++ + L +I + +
Sbjct: 180 GTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD 238
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
E+ + S L D + ++L + KR++ ++A+ HP
Sbjct: 239 EEFFSQTSELAK------------------------DFIRKLLVKETRKRLTIQEALRHP 274
Query: 295 YFDDLDKTR 303
+ +D +
Sbjct: 275 WITPVDNQQ 283
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 137/304 (45%), Gaps = 55/304 (18%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATG-----KIVALKKTRLHEDDEGVPPTTLREVSILR 58
D ++ E++G+G + V R K TG KI+ KK + + RE I R
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-----LEREARICR 60
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYI--RSFRQTGENIPVNTVK 115
L + P++VRL D Q + + YLVF+ + +L + I R F +
Sbjct: 61 KL-QHPNIVRLHDSIQEE-----SFHYLVFDLVTGGELFEDIVAREFYSEAD------AS 108
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHE 173
+ Q+ + +A+CH +GI+HR+LKP NLL+ K +K+AD GL A + + H
Sbjct: 109 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL--AIEVNDSEAWHG 166
Query: 174 IL-TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT 232
T Y +PEVL YS VD+W+ I L+ F + +
Sbjct: 167 FAGTPGYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQ------------- 212
Query: 233 PNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME 292
+++ + + + P+W+ T P + L++ ML +P KRI+A +A++
Sbjct: 213 --HRLYAQIKAGAYDYPSPEWD-----TVTP----EAKSLIDSMLTVNPKKRITADQALK 261
Query: 293 HPYF 296
P+
Sbjct: 262 VPWI 265
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 137/309 (44%), Gaps = 42/309 (13%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTL-REVSIL 57
V D ++ E++G G + V + REK+TG A +KK + GV + REVSIL
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
R + +V+ L DV E RT + L+ E + + F E++ S
Sbjct: 70 RQVLHH-NVITLHDVY-----ENRTDVVLILELVSGG---ELFDFLAQKESLSEEEATSF 120
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMT---LKIADLGLARAFTLPIKKYTHEI 174
+ Q+ GV + H I H DLKP N+++ K + +K+ D GLA + ++ +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKNIF 179
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
T + APE+ + DMWS+ I L++ + F GD++ + L +I + +
Sbjct: 180 GTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD 238
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
E+ + S L D + ++L + KR++ ++A+ HP
Sbjct: 239 EEFFSHTSELAK------------------------DFIRKLLVKETRKRLTIQEALRHP 274
Query: 295 YFDDLDKTR 303
+ +D +
Sbjct: 275 WITPVDNQQ 283
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 126/305 (41%), Gaps = 47/305 (15%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D +E E +G G+Y R KAT A+K + D PT E+ IL +
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRD----PT--EEIEILLRYGQH 75
Query: 64 PHVVRLMDV-KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P+++ L DV G+ T L E +D L++ S R+ ++++ +
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREA---------SAVLFTIT 126
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKT---MTLKIADLGLARAFTLPIKKYTHEILTLWY 179
K V + H G++HRDLKP N+L ++ +++I D G A+ T +
Sbjct: 127 KTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANF 186
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE---K 236
APEV L Y A D+WS+ + +T F + TP E +
Sbjct: 187 VAPEV-LERQGYDAACDIWSLGVLLYTXLTGYTPFANGPD-----------DTPEEILAR 234
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
+ G SL + WN ++ DL+ + L DP +R++A + HP+
Sbjct: 235 IGSGKFSLSGGY----WN---------SVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
Query: 297 DDLDK 301
D+
Sbjct: 282 VHWDQ 286
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 137/304 (45%), Gaps = 55/304 (18%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATG-----KIVALKKTRLHEDDEGVPPTTLREVSILR 58
D ++ E++G+G + V R K TG KI+ KK + + RE I R
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-----LEREARICR 60
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYI--RSFRQTGENIPVNTVK 115
L + P++VRL D Q + + YLVF+ + +L + I R F +
Sbjct: 61 KL-QHPNIVRLHDSIQEE-----SFHYLVFDLVTGGELFEDIVAREFYSEAD------AS 108
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHE 173
+ Q+ + +A+CH +GI+HR+LKP NLL+ K +K+AD GL A + + H
Sbjct: 109 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL--AIEVNDSEAWHG 166
Query: 174 IL-TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT 232
T Y +PEVL YS VD+W+ I L+ F + +
Sbjct: 167 FAGTPGYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQ------------- 212
Query: 233 PNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME 292
+++ + + + P+W+ T P + L++ ML +P KRI+A +A++
Sbjct: 213 --HRLYAQIKAGAYDYPSPEWD-----TVTP----EAKSLIDSMLTVNPKKRITADQALK 261
Query: 293 HPYF 296
P+
Sbjct: 262 VPWI 265
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 140/304 (46%), Gaps = 52/304 (17%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGK-----IVALKK--TRLHEDDEGVPPTTLREVSI 56
+ ++ E++G+G + V R + G+ I+ KK R H+ E RE I
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE-------REARI 63
Query: 57 LRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
R+L + P++VRL D ++EG YL+F+ + +L + I + E + ++
Sbjct: 64 CRLL-KHPNIVRLHD---SISEEGHH--YLIFDLVTGGELFEDIVAREYYSEADASHCIQ 117
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDR--KTMTLKIADLGLARAFTLPIKKYTHE 173
Q+ + V CH G++HR+LKP NLL+ K +K+AD GLA + +
Sbjct: 118 ----QILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGF 173
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 233
T Y +PEVL Y VD+W+ I L+ F D + +L
Sbjct: 174 AGTPGYLSPEVLRKDP-YGKPVDLWACGVILYILLVGYPPF-WDEDQHRLY--------- 222
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
+++ G + P+W+ T P + DL+ +ML +PSKRI+A +A++H
Sbjct: 223 -QQIKAGAYDFPS----PEWD-----TVTP----EAKDLINKMLTINPSKRITAAEALKH 268
Query: 294 PYFD 297
P+
Sbjct: 269 PWIS 272
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 135/292 (46%), Gaps = 48/292 (16%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL 69
E +G G +G V+R E ++ K K ++ D+ + +E+SIL ++R +++ L
Sbjct: 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVK---KEISILN-IARHRNILHL 66
Query: 70 MDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFC 128
++ E L ++FE++ D+ + I + + + + S ++Q+C+ + F
Sbjct: 67 -----HESFESMEELVMIFEFISGLDIFERINT---SAFELNEREIVSYVHQVCEALQFL 118
Query: 129 HGHGILHRDLKPHNLLMD-RKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLG 187
H H I H D++P N++ R++ T+KI + G AR P + L + APE
Sbjct: 119 HSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK-PGDNF-----RLLFTAPEYYAP 172
Query: 188 STH----YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS 243
H STA DMWS+ + L++ F ++ Q + +I T +E+ + +S
Sbjct: 173 EVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISI 232
Query: 244 LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
+ +D ++++L + R++A +A++HP+
Sbjct: 233 ------------------------EAMDFVDRLLVKERKSRMTASEALQHPW 260
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 137/295 (46%), Gaps = 47/295 (15%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+ + EK+G+G G VY A + ATG+ VA+++ L + + + E+ ++R +++P+
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRE-NKNPN 79
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMD----TDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
+V +D ++ L++V EY+ TD+ + G+ + ++ +
Sbjct: 80 IVNYLDSYLVGDE-----LWVVMEYLAGGSLTDV--VTETCMDEGQ------IAAVCREC 126
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
+ + F H + ++HR++K N+L+ ++K+ D G T K + + T ++ A
Sbjct: 127 LQALEFLHSNQVIHRNIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSTMVGTPYWMA 185
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PEV+ Y VD+WS+ + E++ + ++ L+ L++ GTP +
Sbjct: 186 PEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTPELQ----- 238
Query: 242 SSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
NP+ L+ D L + L+ D KR SAK+ ++H +
Sbjct: 239 ------------NPEKLSAIF-------RDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 141/309 (45%), Gaps = 53/309 (17%)
Query: 4 DAFEKLEKVGEGTYGKVYRARE---KATGKIVALK--KTRLHEDDEGVPPTTLREVSILR 58
+ FE L +G+G YGKV++ R+ TGKI A+K K + + T E +IL
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
+ + P +V L+ Q K LYL+ EY+ + + G + +T +
Sbjct: 77 EV-KHPFIVDLIYAFQTGGK-----LYLILEYLSGG--ELFMQLEREGIFME-DTACFYL 127
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TL 177
++ + H GI++RDLKP N++++ + +K+ D GL + ++ TH T+
Sbjct: 128 AEISMALGHLHQKGIIYRDLKPENIMLNHQGH-VKLTDFGLCKE-SIHDGTVTHXFCGTI 185
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL-LGTPNEK 236
Y APE+L+ S H + AVD WS+ + +++T F G++ + + I + L P
Sbjct: 186 EYMAPEILMRSGH-NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP--- 241
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKKAM 291
P L ++ DLL+++L+ + + R+ A +
Sbjct: 242 --------------------------PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQ 275
Query: 292 EHPYFDDLD 300
HP+F ++
Sbjct: 276 AHPFFRHIN 284
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 141/309 (45%), Gaps = 53/309 (17%)
Query: 4 DAFEKLEKVGEGTYGKVYRARE---KATGKIVALK--KTRLHEDDEGVPPTTLREVSILR 58
+ FE L +G+G YGKV++ R+ TGKI A+K K + + T E +IL
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
+ + P +V L+ Q K LYL+ EY+ + + G + +T +
Sbjct: 77 EV-KHPFIVDLIYAFQTGGK-----LYLILEYLSGG--ELFMQLEREGIFME-DTACFYL 127
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TL 177
++ + H GI++RDLKP N++++ + +K+ D GL + ++ TH T+
Sbjct: 128 AEISMALGHLHQKGIIYRDLKPENIMLNHQGH-VKLTDFGLCKE-SIHDGTVTHTFCGTI 185
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL-LGTPNEK 236
Y APE+L+ S H + AVD WS+ + +++T F G++ + + I + L P
Sbjct: 186 EYMAPEILMRSGH-NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP--- 241
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKKAM 291
P L ++ DLL+++L+ + + R+ A +
Sbjct: 242 --------------------------PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQ 275
Query: 292 EHPYFDDLD 300
HP+F ++
Sbjct: 276 AHPFFRHIN 284
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 45/261 (17%)
Query: 52 REVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYI--RSFRQTGENI 109
REV +LR P+V+R ++ R Y+ E L++Y+ + F G
Sbjct: 66 REVQLLRESDEHPNVIRYFCTEKD-----RQFQYIAIELCAATLQEYVEQKDFAHLGLE- 119
Query: 110 PVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKI----ADLGLARAFTL 165
P+ +L+ Q G+A H I+HRDLKPHN+L+ KI +D GL + +
Sbjct: 120 PI----TLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175
Query: 166 PIKKYTHEIL---TLWYRAPEVLLGST--HYSTAVDMWSVACIFAELVTKTALFPGDSEL 220
++ T + APE+L + + VD++S C+F ++++ + P L
Sbjct: 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGS-HPFGKSL 234
Query: 221 QQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYD 280
Q+ +I G SL H P+ + +A +L+E+M+ D
Sbjct: 235 QRQANILL-----------GACSLDCLH--PEKHEDVIAR----------ELIEKMIAMD 271
Query: 281 PSKRISAKKAMEHPYFDDLDK 301
P KR SAK ++HP+F L+K
Sbjct: 272 PQKRPSAKHVLKHPFFWSLEK 292
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 29/214 (13%)
Query: 9 LEKVGEGTYGKVYRAR----EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
L+++G+G +G V R + TG++VA+KK + H +E + RE+ IL+ L D
Sbjct: 19 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFE-REIEILKSLQHD- 75
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QL 121
++V+ V GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+
Sbjct: 76 NIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQI 127
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------ 175
CKG+ + +HRDL N+L++ + +KI D GL + LP K ++
Sbjct: 128 CKGMEYLGTKRYIHRDLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESP 184
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
WY APE L S +S A D+WS + EL T
Sbjct: 185 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 216
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 29/214 (13%)
Query: 9 LEKVGEGTYGKVYRAR----EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
L+++G+G +G V R + TG++VA+KK + H +E + RE+ IL+ L D
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFE-REIEILKSLQHD- 70
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QL 121
++V+ V GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+
Sbjct: 71 NIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQI 122
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------ 175
CKG+ + +HRDL N+L++ + +KI D GL + LP K ++
Sbjct: 123 CKGMEYLGTKRYIHRDLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESP 179
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
WY APE L S +S A D+WS + EL T
Sbjct: 180 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 211
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 29/214 (13%)
Query: 9 LEKVGEGTYGKVYRAR----EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
L+++G+G +G V R + TG++VA+KK + H +E + RE+ IL+ L D
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFE-REIEILKSLQHD- 102
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QL 121
++V+ V GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+
Sbjct: 103 NIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQI 154
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------ 175
CKG+ + +HRDL N+L++ + +KI D GL + LP K ++
Sbjct: 155 CKGMEYLGTKRYIHRDLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESP 211
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
WY APE L S +S A D+WS + EL T
Sbjct: 212 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 243
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 29/214 (13%)
Query: 9 LEKVGEGTYGKVYRAR----EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
L+++G+G +G V R + TG++VA+KK + H +E + RE+ IL+ L D
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFE-REIEILKSLQHD- 69
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QL 121
++V+ V GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+
Sbjct: 70 NIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQI 121
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------ 175
CKG+ + +HRDL N+L++ + +KI D GL + LP K ++
Sbjct: 122 CKGMEYLGTKRYIHRDLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESP 178
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
WY APE L S +S A D+WS + EL T
Sbjct: 179 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 29/214 (13%)
Query: 9 LEKVGEGTYGKVYRAR----EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
L+++G+G +G V R + TG++VA+KK + H +E + RE+ IL+ L D
Sbjct: 22 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFE-REIEILKSLQHD- 78
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QL 121
++V+ V GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+
Sbjct: 79 NIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQI 130
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------ 175
CKG+ + +HRDL N+L++ + +KI D GL + LP K ++
Sbjct: 131 CKGMEYLGTKRYIHRDLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESP 187
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
WY APE L S +S A D+WS + EL T
Sbjct: 188 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 29/214 (13%)
Query: 9 LEKVGEGTYGKVYRAR----EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
L+++G+G +G V R + TG++VA+KK + H +E + RE+ IL+ L D
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFE-REIEILKSLQHD- 71
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QL 121
++V+ V GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+
Sbjct: 72 NIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQI 123
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------ 175
CKG+ + +HRDL N+L++ + +KI D GL + LP K ++
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESP 180
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
WY APE L S +S A D+WS + EL T
Sbjct: 181 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 29/214 (13%)
Query: 9 LEKVGEGTYGKVYRAR----EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
L+++G+G +G V R + TG++VA+KK + H +E + RE+ IL+ L D
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFE-REIEILKSLQHD- 74
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QL 121
++V+ V GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+
Sbjct: 75 NIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQI 126
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------ 175
CKG+ + +HRDL N+L++ + +KI D GL + LP K ++
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESP 183
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
WY APE L S +S A D+WS + EL T
Sbjct: 184 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 29/214 (13%)
Query: 9 LEKVGEGTYGKVYRAR----EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
L+++G+G +G V R + TG++VA+KK + H +E + RE+ IL+ L D
Sbjct: 20 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFE-REIEILKSLQHD- 76
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QL 121
++V+ V GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+
Sbjct: 77 NIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQI 128
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------ 175
CKG+ + +HRDL N+L++ + +KI D GL + LP K ++
Sbjct: 129 CKGMEYLGTKRYIHRDLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESP 185
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
WY APE L S +S A D+WS + EL T
Sbjct: 186 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 29/214 (13%)
Query: 9 LEKVGEGTYGKVYRAR----EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
L+++G+G +G V R + TG++VA+KK + H +E + RE+ IL+ L D
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFE-REIEILKSLQHD- 71
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QL 121
++V+ V GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+
Sbjct: 72 NIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQI 123
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------ 175
CKG+ + +HRDL N+L++ + +KI D GL + LP K ++
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESP 180
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
WY APE L S +S A D+WS + EL T
Sbjct: 181 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 29/214 (13%)
Query: 9 LEKVGEGTYGKVYRAR----EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
L+++G+G +G V R + TG++VA+KK + H +E + RE+ IL+ L D
Sbjct: 21 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFE-REIEILKSLQHD- 77
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QL 121
++V+ V GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+
Sbjct: 78 NIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQI 129
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------ 175
CKG+ + +HRDL N+L++ + +KI D GL + LP K ++
Sbjct: 130 CKGMEYLGTKRYIHRDLATRNILVENEN-RVKIGDFGLTK--VLPQDKEXXKVKEPGESP 186
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
WY APE L S +S A D+WS + EL T
Sbjct: 187 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 218
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 29/214 (13%)
Query: 9 LEKVGEGTYGKVYRAR----EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
L+++G+G +G V R + TG++VA+KK + H +E + RE+ IL+ L D
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFE-REIEILKSLQHD- 89
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QL 121
++V+ V GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+
Sbjct: 90 NIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQI 141
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------ 175
CKG+ + +HRDL N+L++ + +KI D GL + LP K ++
Sbjct: 142 CKGMEYLGTKRYIHRDLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESP 198
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
WY APE L S +S A D+WS + EL T
Sbjct: 199 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 230
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 138/307 (44%), Gaps = 56/307 (18%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD 71
+G G+ G V + G+ VA+K+ + D L E+ +L P+V+R
Sbjct: 41 LGYGSSGTVV-FQGSFQGRPVAVKRMLIDFCD-----IALMEIKLLTESDDHPNVIRYY- 93
Query: 72 VKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPV----NTVKSLMYQLCKGVAF 127
++ LY+ E + +L+ + S + EN+ + N + SL+ Q+ GVA
Sbjct: 94 ----CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI-SLLRQIASGVAH 148
Query: 128 CHGHGILHRDLKPHNLLM--------DRKT----MTLKIADLGLARAFTLPIKKYTHEIL 175
H I+HRDLKP N+L+ D++T + + I+D GL + + +
Sbjct: 149 LHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 176 ----TLWYRAPEVLLGST--HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL 229
T +RAPE+L ST + ++D++S+ C+F +++K GD ++
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE------- 261
Query: 230 LGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKK 289
+ G+ SL E + +SL + DL+ QM+ +DP KR +A K
Sbjct: 262 -----SNIIRGIFSL---DEMKCLHDRSLIA-------EATDLISQMIDHDPLKRPTAMK 306
Query: 290 AMEHPYF 296
+ HP F
Sbjct: 307 VLRHPLF 313
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 29/214 (13%)
Query: 9 LEKVGEGTYGKVYRAR----EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
L+++G+G +G V R + TG++VA+KK + H +E + RE+ IL+ L D
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFE-REIEILKSLQHD- 89
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QL 121
++V+ V GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+
Sbjct: 90 NIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQI 141
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------ 175
CKG+ + +HRDL N+L++ + +KI D GL + LP K ++
Sbjct: 142 CKGMEYLGTKRYIHRDLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESP 198
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
WY APE L S +S A D+WS + EL T
Sbjct: 199 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 230
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 138/307 (44%), Gaps = 56/307 (18%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD 71
+G G+ G V + G+ VA+K+ + D L E+ +L P+V+R
Sbjct: 41 LGYGSSGTVV-FQGSFQGRPVAVKRMLIDFCD-----IALMEIKLLTESDDHPNVIRYY- 93
Query: 72 VKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPV----NTVKSLMYQLCKGVAF 127
++ LY+ E + +L+ + S + EN+ + N + SL+ Q+ GVA
Sbjct: 94 ----CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI-SLLRQIASGVAH 148
Query: 128 CHGHGILHRDLKPHNLLM--------DRKT----MTLKIADLGLARAFTLPIKKYTHEIL 175
H I+HRDLKP N+L+ D++T + + I+D GL + + +
Sbjct: 149 LHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 176 ----TLWYRAPEVLLGST--HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL 229
T +RAPE+L ST + ++D++S+ C+F +++K GD ++
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE------- 261
Query: 230 LGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKK 289
+ G+ SL E + +SL + DL+ QM+ +DP KR +A K
Sbjct: 262 -----SNIIRGIFSL---DEMKCLHDRSLIA-------EATDLISQMIDHDPLKRPTAMK 306
Query: 290 AMEHPYF 296
+ HP F
Sbjct: 307 VLRHPLF 313
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 154/376 (40%), Gaps = 102/376 (27%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML-SRDP 64
+ + K+G G + V+ + + K VA+K + E T L E+ +L+ + + DP
Sbjct: 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK---SAEHYTETALDEIRLLKSVRNSDP 95
Query: 65 H------VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
+ VV+L+D + G T + +VFE + L K+I + + +P+ VK ++
Sbjct: 96 NDPNREMVVQLLDDFKISGVNG-THICMVFEVLGHHLLKWI--IKSNYQGLPLPCVKKII 152
Query: 119 YQLCKGVAFCHGHG-ILHRDLKPHNLLM-------------------------------- 145
Q+ +G+ + H I+H D+KP N+L+
Sbjct: 153 QQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVST 212
Query: 146 ----------------DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
+ + + +KIADLG A K +T +I T YR+ EVL+GS
Sbjct: 213 APATAGNFLVNPLEPKNAEKLKVKIADLGNACWVH---KHFTEDIQTRQYRSLEVLIGSG 269
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDS------ELQQLLHIFRLLG-TPNEKVWPG-- 240
Y+T D+WS AC+ EL T LF S + + I LLG P + + G
Sbjct: 270 -YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKY 328
Query: 241 -------------VSSLMNWH------EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDP 281
++ L W E +W+ + A D L ML+ P
Sbjct: 329 SKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFT--------DFLLPMLELIP 380
Query: 282 SKRISAKKAMEHPYFD 297
KR +A + + HP+ +
Sbjct: 381 EKRATAAECLRHPWLN 396
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 29/214 (13%)
Query: 9 LEKVGEGTYGKVYRAR----EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
L+++G+G +G V R + TG++VA+KK + H +E + RE+ IL+ L D
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFE-REIEILKSLQHD- 71
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QL 121
++V+ V GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+
Sbjct: 72 NIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQI 123
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------ 175
CKG+ + +HRDL N+L++ + +KI D GL + LP K ++
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENEN-RVKIGDFGLTKV--LPQDKEFFKVKEPGESP 180
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
WY APE L S +S A D+WS + EL T
Sbjct: 181 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 212
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 12/220 (5%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
+F++L ++G G+YG+V++ R K G++ A+K++ L EV + +
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P VRL Q E +LYL E L+++ ++ G ++P V +
Sbjct: 117 PCCVRLE-----QAWEEGGILYLQTELCGPSLQQHCEAW---GASLPEAQVWGYLRDTLL 168
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+A H G++H D+KP N+ + + K+ D GL E Y APE
Sbjct: 169 ALAHLHSQGLVHLDVKPANIFLGPRGRC-KLGDFGLLVELGTAGAGEVQEG-DPRYMAPE 226
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQL 223
+L GS Y TA D++S+ E+ L G QQL
Sbjct: 227 LLQGS--YGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 154/376 (40%), Gaps = 102/376 (27%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML-SRDP 64
+ + K+G G + V+ + + K VA+K + E T L E+ +L+ + + DP
Sbjct: 23 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK---SAEHYTETALDEIRLLKSVRNSDP 79
Query: 65 H------VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
+ VV+L+D + G T + +VFE + L K+I + + +P+ VK ++
Sbjct: 80 NDPNREMVVQLLDDFKISGVNG-THICMVFEVLGHHLLKWI--IKSNYQGLPLPCVKKII 136
Query: 119 YQLCKGVAFCHGHG-ILHRDLKPHNLLM-------------------------------- 145
Q+ +G+ + H I+H D+KP N+L+
Sbjct: 137 QQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVST 196
Query: 146 ----------------DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 189
+ + + +KIADLG A K +T +I T YR+ EVL+GS
Sbjct: 197 APATAGNFLVNPLEPKNAEKLKVKIADLGNACWVH---KHFTEDIQTRQYRSLEVLIGSG 253
Query: 190 HYSTAVDMWSVACIFAELVTKTALFPGDS------ELQQLLHIFRLLG-TPNEKVWPG-- 240
Y+T D+WS AC+ EL T LF S + + I LLG P + + G
Sbjct: 254 -YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKY 312
Query: 241 -------------VSSLMNWH------EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDP 281
++ L W E +W+ + A D L ML+ P
Sbjct: 313 SKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFT--------DFLLPMLELIP 364
Query: 282 SKRISAKKAMEHPYFD 297
KR +A + + HP+ +
Sbjct: 365 EKRATAAECLRHPWLN 380
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 133/307 (43%), Gaps = 44/307 (14%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
FE +E VG GTYG+VY+ R TG++ A+K + D+E +E+++L+ S +
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE---EEIKQEINMLKKYSHHRN 82
Query: 66 VVRLMDVKQGQNKEG-RTVLYLVFEYMD----TDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ +N G L+LV E+ TDL K + G + + + +
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK-----GNTLKEEWIAYICRE 137
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ +G++ H H ++HRD+K N+L+ + +K+ D G++ + + I T ++
Sbjct: 138 ILRGLSHLHQHKVIHRDIKGQNVLL-TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWM 196
Query: 181 APEVLLGSTH----YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEK 236
APEV+ + Y D+WS+ E+ P ++ + +F + P +
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGA---PPLCDMHPMRALFLIPRNPAPR 253
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
+ + +W+ K +E L + S+R + ++ M+HP+
Sbjct: 254 L-----------KSKKWS------------KKFQSFIESCLVKNHSQRPATEQLMKHPFI 290
Query: 297 DDLDKTR 303
D R
Sbjct: 291 RDQPNER 297
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 31/229 (13%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
++ + ++ ++K+G G VY A + VA+K +PP E L+
Sbjct: 8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIF-------IPPREKEET--LKRF 58
Query: 61 SRDPH---------VVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIP 110
R+ H +V ++DV + + YLV EY++ L +YI S +
Sbjct: 59 EREVHNSSQLSHQNIVSMIDVDEEDD-----CYYLVMEYIEGPTLSEYIESHGP----LS 109
Query: 111 VNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKK 169
V+T + Q+ G+ H I+HRD+KP N+L+D TLKI D G+A+A + + +
Sbjct: 110 VDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNK-TLKIFDFGIAKALSETSLTQ 168
Query: 170 YTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 218
H + T+ Y +PE G D++S+ + E++ F G++
Sbjct: 169 TNHVLGTVQYFSPEQAKGEA-TDECTDIYSIGIVLYEMLVGEPPFNGET 216
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 138/311 (44%), Gaps = 60/311 (19%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD 71
+G G+ G V + G+ VA+K+ + D L E+ +L P+V+R
Sbjct: 23 LGYGSSGTVV-FQGSFQGRPVAVKRMLIDFCD-----IALMEIKLLTESDDHPNVIRYY- 75
Query: 72 VKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPV----NTVKSLMYQLCKGVAF 127
++ LY+ E + +L+ + S + EN+ + N + SL+ Q+ GVA
Sbjct: 76 ----CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI-SLLRQIASGVAH 130
Query: 128 CHGHGILHRDLKPHNLLM--------DRKT----MTLKIADLGLARAFTLPIKKYTHEIL 175
H I+HRDLKP N+L+ D++T + + I+D GL + + +
Sbjct: 131 LHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLN 190
Query: 176 ----TLWYRAPEVLLGSTHYST------AVDMWSVACIFAELVTKTALFPGDSELQQLLH 225
T +RAPE+L S + T ++D++S+ C+F +++K GD ++
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--- 247
Query: 226 IFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRI 285
+ G+ SL E + +SL + DL+ QM+ +DP KR
Sbjct: 248 ---------SNIIRGIFSL---DEMKCLHDRSLIA-------EATDLISQMIDHDPLKRP 288
Query: 286 SAKKAMEHPYF 296
+A K + HP F
Sbjct: 289 TAMKVLRHPLF 299
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 126/299 (42%), Gaps = 46/299 (15%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D +E ++ +G G +G R+K + ++VA+K E E + RE+ R L R
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI---ERGEKIAANVKREIINHRSL-RH 74
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++VR +V T L +V EY +L + I + + E+ + QL
Sbjct: 75 PNIVRFKEVILTP-----THLAIVMEYASGGELFERICNAGRFSED----EARFFFQQLI 125
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMT-LKIADLGLARAFTLPIKKYTHEILTLWYRA 181
GV++CH + HRDLK N L+D LKI D G +++ L + + + T Y A
Sbjct: 126 SGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS-TVGTPAYIA 184
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLH-IFRLLGTPNEKVWPG 240
PEVLL + D+WS ++ F E + I R+L
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL---------- 234
Query: 241 VSSLMNWHEYPQWNPQSLATAVPN---LDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
++ A+P+ + + L+ ++ DP+KRIS + H +F
Sbjct: 235 ----------------NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 17/225 (7%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTL----REVSILRM 59
D +E E +G G +V+ AR+ + VA+K R D P+ RE
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRA---DLARDPSFYLRFRREAQNAAA 68
Query: 60 LSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY 119
L+ P +V + D + + G + Y+V EY+D + I G P ++ ++
Sbjct: 69 LNH-PAIVAVYDTGEAETPAG-PLPYIVMEYVDGVTLRDI--VHTEGPMTPKRAIE-VIA 123
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT---LPIKKYTHEILT 176
C+ + F H +GI+HRD+KP N+L+ T +K+ D G+ARA + + I T
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANILIS-ATNAVKVVDFGIARAIADSGNSVXQTAAVIGT 182
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
Y +PE G + D++S+ C+ E++T F GDS +
Sbjct: 183 AQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 125/298 (41%), Gaps = 34/298 (11%)
Query: 2 VMDAFEKLEKV-GEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
++D ++ +V G G GKV + K T + ALK + P REV +
Sbjct: 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQ-------DCPKARREVELHWRA 111
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
S+ PH+VR++DV + GR L +V E +D + + R + + +
Sbjct: 112 SQCPHIVRIVDVYENLYA-GRKCLLIVXECLDGG-ELFSRIQDRGDQAFTEREASEIXKS 169
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+ + + + H I HRD+KP NLL R LK+ D G A+ T T T +
Sbjct: 170 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPY 228
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y APEV LG Y + D WS+ I L+ F + L +
Sbjct: 229 YVAPEV-LGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGL---------------AIS 272
Query: 239 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
PG + + +Y NP+ + ++ L+ +L+ +P++R + + HP+
Sbjct: 273 PGXKTRIRXGQYEFPNPE-----WSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWI 325
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 138/311 (44%), Gaps = 60/311 (19%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD 71
+G G+ G V + G+ VA+K+ + D L E+ +L P+V+R
Sbjct: 23 LGYGSSGTVV-FQGSFQGRPVAVKRMLIDFCD-----IALMEIKLLTESDDHPNVIRYY- 75
Query: 72 VKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPV----NTVKSLMYQLCKGVAF 127
++ LY+ E + +L+ + S + EN+ + N + SL+ Q+ GVA
Sbjct: 76 ----CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI-SLLRQIASGVAH 130
Query: 128 CHGHGILHRDLKPHNLLM--------DRKT----MTLKIADLGLARAFTLPIKKYTHEIL 175
H I+HRDLKP N+L+ D++T + + I+D GL + + +
Sbjct: 131 LHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 190
Query: 176 ----TLWYRAPEVLLGSTHYST------AVDMWSVACIFAELVTKTALFPGDSELQQLLH 225
T +RAPE+L S + T ++D++S+ C+F +++K GD ++
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--- 247
Query: 226 IFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRI 285
+ G+ SL E + +SL + DL+ QM+ +DP KR
Sbjct: 248 ---------SNIIRGIFSL---DEMKCLHDRSLIA-------EATDLISQMIDHDPLKRP 288
Query: 286 SAKKAMEHPYF 296
+A K + HP F
Sbjct: 289 TAMKVLRHPLF 299
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 29/214 (13%)
Query: 9 LEKVGEGTYGKVYRAR----EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
L+++G+G +G V R + TG++VA+KK + H +E + RE+ IL+ L D
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFE-REIEILKSLQHD- 74
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QL 121
++V+ V GR L L+ EY+ L+ Y+++ + ++ +K L Y Q+
Sbjct: 75 NIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQAHAER-----IDHIKLLQYTSQI 126
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------ 175
CKG+ + +HRDL N+L++ + +KI D GL + LP K ++
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENEN-RVKIGDFGLTK--VLPQDKEXXKVKEPGESP 183
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
WY APE L S +S A D+WS + EL T
Sbjct: 184 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 215
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 118/277 (42%), Gaps = 35/277 (12%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD 71
+GEG++ + K + + A+K + + T +E++ L++ P++V+L +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKII-----SKRMEANTQKEITALKLCEGHPNIVKLHE 73
Query: 72 VKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 130
V Q +LV E ++ +L + I+ + E +M +L V+ H
Sbjct: 74 VFHDQ-----LHTFLVMELLNGGELFERIKKKKHFSET----EASYIMRKLVSAVSHMHD 124
Query: 131 HGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGS 188
G++HRDLKP NLL + + +KI D G AR + TL Y APE LL
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPE-LLNQ 183
Query: 189 THYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH 248
Y + D+WS+ I +++ F H L T ++ +
Sbjct: 184 NGYDESCDLWSLGVILYTMLSGQVPFQS--------HDRSLTCTSAVEIMKKIKKGDFSF 235
Query: 249 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRI 285
E W N+ ++ DL++ +L DP+KR+
Sbjct: 236 EGEAWK---------NVSQEAKDLIQGLLTVDPNKRL 263
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 134/293 (45%), Gaps = 44/293 (15%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
F KLEK+G+G++G+V++ + T K+VA+K L E ++ + +E+++L P+
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI-EDIQQEITVLSQCD-SPY 81
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVN--TVKSLMYQLCK 123
V + K L+++ EY+ S E P++ + +++ ++ K
Sbjct: 82 VTKYYGSYLKDTK-----LWIIMEYLGGG------SALDLLEPGPLDETQIATILREILK 130
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
G+ + H +HRD+K N+L+ +K+AD G+A T K + T ++ APE
Sbjct: 131 GLDYLHSEKKIHRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE 189
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS 243
V+ S Y + D+WS+ EL P SEL + +F +
Sbjct: 190 VIKQSA-YDSKADIWSLGITAIELARGE---PPHSELHPMKVLFLI-------------- 231
Query: 244 LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P+ NP +L N K + +E L +PS R +AK+ ++H +
Sbjct: 232 -------PKNNPPTLEG---NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 274
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 140/310 (45%), Gaps = 45/310 (14%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKA---TGKIVALKKTRLHEDDEGVPPT--TLREVSIL 57
++ FE L+ +G G YGKV+ R+ + TGK+ A+K + + T T E +L
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 112
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ + P +V L Q + K L+L+ +Y++ + + E + V+
Sbjct: 113 EHIRQSPFLVTLHYAFQTETK-----LHLILDYINGG---ELFTHLSQRERFTEHEVQIY 164
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-T 176
+ ++ + H GI++RD+K N+L+D + + D GL++ F + ++ T
Sbjct: 165 VGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVV-LTDFGLSKEFVADETERAYDFCGT 223
Query: 177 LWYRAPEVLLGS-THYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
+ Y AP+++ G + + AVD WS+ + EL+T + F D E I R +
Sbjct: 224 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI----- 278
Query: 236 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKKA 290
L + YPQ +LA DL++++L DP KR+ A +
Sbjct: 279 --------LKSEPPYPQ-EMSALAK----------DLIQRLLMKDPKKRLGCGPRDADEI 319
Query: 291 MEHPYFDDLD 300
EH +F ++
Sbjct: 320 KEHLFFQKIN 329
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 134/293 (45%), Gaps = 44/293 (15%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
F KLEK+G+G++G+V++ + T K+VA+K L E ++ + +E+++L P+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCD-SPY 66
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVN--TVKSLMYQLCK 123
V + K L+++ EY+ S E P++ + +++ ++ K
Sbjct: 67 VTKYYGSYLKDTK-----LWIIMEYLGGG------SALDLLEPGPLDETQIATILREILK 115
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
G+ + H +HRD+K N+L+ +K+AD G+A T K + T ++ APE
Sbjct: 116 GLDYLHSEKKIHRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE 174
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS 243
V+ S Y + D+WS+ EL P SEL + +F +
Sbjct: 175 VIKQSA-YDSKADIWSLGITAIELARGE---PPHSELHPMKVLFLI-------------- 216
Query: 244 LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P+ NP +L N K + +E L +PS R +AK+ ++H +
Sbjct: 217 -------PKNNPPTLEG---NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 109/214 (50%), Gaps = 29/214 (13%)
Query: 9 LEKVGEGTYGKVYRAR----EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
L+++G+G +G V R + TG++VA+KK + H +E + RE+ IL+ L D
Sbjct: 16 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFE-REIEILKSLQHD- 72
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QL 121
++V+ V GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+
Sbjct: 73 NIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQI 124
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------ 175
CKG+ + +HR+L N+L++ + +KI D GL + LP K +++
Sbjct: 125 CKGMEYLGTKRYIHRNLATRNILVENEN-RVKIGDFGLTKV--LPQDKEYYKVKEPGESP 181
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
WY APE L S +S A D+WS + EL T
Sbjct: 182 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 213
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 123/286 (43%), Gaps = 39/286 (13%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+GEG+ G V A EK TGK VA+KK L + EV I+R D V
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR--ELLFNEVVIMRDYHHDNVVDMYS 109
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 130
G L++V E+++ I + + E + ++ + + +++ H
Sbjct: 110 SYLVGDE------LWVVMEFLEGGALTDIVTHTRMNE----EQIATVCLSVLRALSYLHN 159
Query: 131 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTH 190
G++HRD+K ++L+ +K++D G + + K + T ++ APEV +
Sbjct: 160 QGVIHRDIKSDSILLTSDG-RIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEV-ISRLP 217
Query: 191 YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY 250
Y T VD+WS+ + E++ + + LQ + I L P K VSS++
Sbjct: 218 YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSL-PPRVKDLHKVSSVLR---- 272
Query: 251 PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
L+ ML +PS+R +A++ + HP+
Sbjct: 273 --------------------GFLDLMLVREPSQRATAQELLGHPFL 298
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 134/293 (45%), Gaps = 44/293 (15%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
F KLEK+G+G++G+V++ + T K+VA+K L E ++ + +E+++L P+
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCD-SPY 86
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVN--TVKSLMYQLCK 123
V + K L+++ EY+ S E P++ + +++ ++ K
Sbjct: 87 VTKYYGSYLKDTK-----LWIIMEYLGGG------SALDLLEPGPLDETQIATILREILK 135
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
G+ + H +HRD+K N+L+ +K+AD G+A T K + T ++ APE
Sbjct: 136 GLDYLHSEKKIHRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 194
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS 243
V+ S Y + D+WS+ EL P SEL + +F +
Sbjct: 195 VIKQSA-YDSKADIWSLGITAIELARGE---PPHSELHPMKVLFLI-------------- 236
Query: 244 LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P+ NP +L N K + +E L +PS R +AK+ ++H +
Sbjct: 237 -------PKNNPPTLEG---NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 279
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 134/314 (42%), Gaps = 52/314 (16%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
FE ++ +G G +G V+ A+ K A+K+ RL + E +REV L L P
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRL-PNRELAREKVMREVKALAKLEH-PG 64
Query: 66 VVRLMDV-------KQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
+VR + ++ Q + LY+ + + K + R T E + +
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT---------LPIKK 169
Q+ + V F H G++HRDLKP N+ + +K+ D GL A P+
Sbjct: 125 LQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV-VKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 170 Y---THEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHI 226
Y T ++ T Y +PE + G++ YS VD++S+ I EL L+P ++++++
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFEL-----LYPFSTQMERV--- 234
Query: 227 FRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
R L +P + + EY +++ ML P +R
Sbjct: 235 -RTLTDVRNLKFPPLFTQKYPCEYV--------------------MVQDMLSPSPMERPE 273
Query: 287 AKKAMEHPYFDDLD 300
A +E+ F+DLD
Sbjct: 274 AINIIENAVFEDLD 287
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 134/293 (45%), Gaps = 44/293 (15%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
F KLEK+G+G++G+V++ + T K+VA+K L E ++ + +E+++L P+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCD-SPY 66
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVN--TVKSLMYQLCK 123
V + K L+++ EY+ S E P++ + +++ ++ K
Sbjct: 67 VTKYYGSYLKDTK-----LWIIMEYLGGG------SALDLLEPGPLDETQIATILREILK 115
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
G+ + H +HRD+K N+L+ +K+AD G+A T K + T ++ APE
Sbjct: 116 GLDYLHSEKKIHRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 174
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS 243
V+ S Y + D+WS+ EL P SEL + +F +
Sbjct: 175 VIKQSA-YDSKADIWSLGITAIELARGE---PPHSELHPMKVLFLI-------------- 216
Query: 244 LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P+ NP +L N K + +E L +PS R +AK+ ++H +
Sbjct: 217 -------PKNNPPTLEG---NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTL----REVSILRM 59
D +E E +G G +V+ AR+ + VA+K R D P+ RE
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRA---DLARDPSFYLRFRREAQNAAA 68
Query: 60 LSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY 119
L+ P +V + D + + G + Y+V EY+D + I G P ++ ++
Sbjct: 69 LNH-PAIVAVYDTGEAETPAG-PLPYIVMEYVDGVTLRDI--VHTEGPMTPKRAIE-VIA 123
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILT 176
C+ + F H +GI+HRD+KP N+++ T +K+ D G+ARA T I T
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 218
Y +PE G + D++S+ C+ E++T F GDS
Sbjct: 183 AQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 17/225 (7%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTL----REVSILRM 59
D +E E +G G +V+ AR+ + VA+K R D P+ RE
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRA---DLARDPSFYLRFRREAQNAAA 68
Query: 60 LSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY 119
L+ P +V + D + + G + Y+V EY+D + I G P ++ ++
Sbjct: 69 LNH-PAIVAVYDTGEAETPAG-PLPYIVMEYVDGVTLRDI--VHTEGPMTPKRAIE-VIA 123
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILT 176
C+ + F H +GI+HRD+KP N+++ T +K+ D G+ARA T I T
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
Y +PE G + D++S+ C+ E++T F GDS +
Sbjct: 183 AQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 126/299 (42%), Gaps = 46/299 (15%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D +E ++ +G G +G R+K + ++VA+K E E + RE+ R L R
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI---ERGEKIDENVKREIINHRSL-RH 73
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++VR +V T L +V EY +L + I + + E+ + QL
Sbjct: 74 PNIVRFKEVILTP-----THLAIVMEYASGGELFERICNAGRFSED----EARFFFQQLI 124
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMT-LKIADLGLARAFTLPIKKYTHEILTLWYRA 181
GV++CH + HRDLK N L+D LKI D G +++ L + + + T Y A
Sbjct: 125 SGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS-TVGTPAYIA 183
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLH-IFRLLGTPNEKVWPG 240
PEVLL + D+WS ++ F E + I R+L
Sbjct: 184 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL---------- 233
Query: 241 VSSLMNWHEYPQWNPQSLATAVPN---LDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
++ A+P+ + + L+ ++ DP+KRIS + H +F
Sbjct: 234 ----------------NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 276
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 108/214 (50%), Gaps = 29/214 (13%)
Query: 9 LEKVGEGTYGKVYRAR----EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
L ++G+G +G V R + TG++VA+KK + H +E + RE+ IL+ L D
Sbjct: 18 LRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFE-REIEILKSLQHD- 74
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QL 121
++V+ V GR L L+ E++ L++Y++ ++ ++ +K L Y Q+
Sbjct: 75 NIVKYKGVCYSA---GRRNLKLIMEFLPYGSLREYLQKHKER-----IDHIKLLQYTSQI 126
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------ 175
CKG+ + +HRDL N+L++ + +KI D GL + LP K ++
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESP 183
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
WY APE L S +S A D+WS + EL T
Sbjct: 184 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 215
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + TG A+K D + V TL E IL
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EYM D+ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYMPGGDMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +K+AD G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IKVADFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 149/358 (41%), Gaps = 79/358 (22%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREK---ATGKIVALKKTRLHEDDEGVPPTT--LREVSILR 58
+ F+ +K+GEGT+ VY A + + +ALK + PT+ +R + L+
Sbjct: 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKH---------LIPTSHPIRIAAELQ 71
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM 118
L+ +M VK K V+ + Y++ + SF ++ V+ M
Sbjct: 72 CLTVAGGQDNVMGVKYCFRKNDHVVIAM--PYLEHE------SFLDILNSLSFQEVREYM 123
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA---FTLPIKKYTHE-- 173
L K + H GI+HRD+KP N L +R+ + D GLA+ + + K+
Sbjct: 124 LNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEA 183
Query: 174 -----------------------ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT- 209
T +RAPEVL + +TA+DMWS IF L++
Sbjct: 184 QQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG 243
Query: 210 KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS---SLMNWHEYPQWNPQSLA------- 259
+ + +L L I + G+ E + + S++ E P + + L
Sbjct: 244 RYPFYKASDDLTALAQIMTIRGS-RETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMD 302
Query: 260 TAVPNLDKD-----------------GLDLLEQMLQYDPSKRISAKKAMEHPYFDDLD 300
++ P L D DLL+++L +P+ RI+A++A+ HP+F D+
Sbjct: 303 SSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS 360
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + TG A+K D + V TL E IL
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EYM D+ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYMPGGDMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +K+AD G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IKVADFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 17/225 (7%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTL----REVSILRM 59
D +E E +G G +V+ AR+ + VA+K R D P+ RE
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRA---DLARDPSFYLRFRREAQNAAA 68
Query: 60 LSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY 119
L+ P +V + D + + G + Y+V EY+D + I G P ++ ++
Sbjct: 69 LNH-PAIVAVYDTGEAETPAG-PLPYIVMEYVDGVTLRDI--VHTEGPMTPKRAIE-VIA 123
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILT 176
C+ + F H +GI+HRD+KP N+++ T +K+ D G+ARA T I T
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
Y +PE G + D++S+ C+ E++T F GDS +
Sbjct: 183 AQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 134/306 (43%), Gaps = 44/306 (14%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALK--KTRLHEDDEGVPPTTLREVSILRMLS 61
+ +E + ++G+G +GKVY+A+ K TG + A K +T+ E+ E + E+ IL
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDY----IVEIEILATCD 66
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
P++V+L+ K L+++ E+ I G P ++ + Q+
Sbjct: 67 H-PYIVKLLGAYYHDGK-----LWIMIEFCPGGAVDAIMLELDRGLTEP--QIQVVCRQM 118
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
+ + F H I+HRDLK N+LM + +++AD G++ ++K I T ++ A
Sbjct: 119 LEALNFLHSKRIIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSFIGTPYWMA 177
Query: 182 PEVLLGSTH----YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 237
PEV++ T Y D+WS+ E+ + P EL + + ++ +
Sbjct: 178 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQ---IEPPHHELNPMRVLLKIAKS----- 229
Query: 238 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+P +L T + D L+ L +P R SA + +EHP+
Sbjct: 230 ----------------DPPTLLTP-SKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVS 272
Query: 298 DLDKTR 303
+ +
Sbjct: 273 SITSNK 278
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 134/306 (43%), Gaps = 44/306 (14%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALK--KTRLHEDDEGVPPTTLREVSILRMLS 61
+ +E + ++G+G +GKVY+A+ K TG + A K +T+ E+ E + E+ IL
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDY----IVEIEILATCD 74
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
P++V+L+ K L+++ E+ I G P ++ + Q+
Sbjct: 75 H-PYIVKLLGAYYHDGK-----LWIMIEFCPGGAVDAIMLELDRGLTEP--QIQVVCRQM 126
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
+ + F H I+HRDLK N+LM + +++AD G++ ++K I T ++ A
Sbjct: 127 LEALNFLHSKRIIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSFIGTPYWMA 185
Query: 182 PEVLLGSTH----YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 237
PEV++ T Y D+WS+ E+ + P EL + + ++ +
Sbjct: 186 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQ---IEPPHHELNPMRVLLKIAKS----- 237
Query: 238 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
+P +L T + D L+ L +P R SA + +EHP+
Sbjct: 238 ----------------DPPTLLTP-SKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVS 280
Query: 298 DLDKTR 303
+ +
Sbjct: 281 SITSNK 286
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 19/226 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTL----REVSILRM 59
D +E E +G G +V+ AR+ + VA+K R D P+ RE
Sbjct: 29 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRA---DLARDPSFYLRFRREAQNAAA 85
Query: 60 LSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLM 118
L+ P +V + D + + G + Y+V EY+D L+ + + G P ++ ++
Sbjct: 86 LNH-PAIVAVYDTGEAETPAG-PLPYIVMEYVDGVTLRDIVHT---EGPMTPKRAIE-VI 139
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE---IL 175
C+ + F H +GI+HRD+KP N+++ T +K+ D G+ARA T I
Sbjct: 140 ADACQALNFSHQNGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSVTQTAAVIG 198
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y +PE G + D++S+ C+ E++T F GDS +
Sbjct: 199 TAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 243
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 44/309 (14%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-TLREVSILRMLSR 62
+ F + +G+G +G+V + +ATGK+ A KK + L E IL ++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQL 121
VV L E + L LV M+ DLK +I Q G P ++
Sbjct: 244 R-FVVSL-----AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEI 295
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
C G+ H I++RDLKP N+L+D ++I+DLGLA + + T+ Y A
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGH-IRISDLGLA-VHVPEGQTIKGRVGTVGYMA 353
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PEV + + Y+ + D W++ C+ E++ G S QQ R E+V V
Sbjct: 354 PEV-VKNERYTFSPDWWALGCLLYEMIA------GQSPFQQ-----RKKKIKREEVERLV 401
Query: 242 SSLMNWHEYPQ-WNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRI-----SAKKAMEHPY 295
+ EY + ++PQ+ + L Q+L DP++R+ SA++ EHP
Sbjct: 402 KEVP--EEYSERFSPQARS------------LCSQLLCKDPAERLGCRGGSAREVKEHPL 447
Query: 296 FDDLDKTRL 304
F L+ RL
Sbjct: 448 FKKLNFKRL 456
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 21/220 (9%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTLREVSILRMLSR 62
F L +G+G++GKV A K T ++ A LKK + +DD+ T+ E +L +L +
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDD--VECTMVEKRVLALLDK 78
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMY-- 119
P + +L Q ++ LY V EY++ DL +I+ Q G+ +++ Y
Sbjct: 79 PPFLTQLHSCFQTVDR-----LYFVMEYVNGGDLMYHIQ---QVGK---FKEPQAVFYAA 127
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY 179
++ G+ F H GI++RDLK N+++D + +KIAD G+ + + T Y
Sbjct: 128 EISIGLFFLHKRGIIYRDLKLDNVMLDSEG-HIKIADFGMCKEHMMDGVTTREFCGTPDY 186
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 219
APE+ + Y +VD W+ + E++ F G+ E
Sbjct: 187 IAPEI-IAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE 225
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 44/309 (14%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-TLREVSILRMLSR 62
+ F + +G+G +G+V + +ATGK+ A KK + L E IL ++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQL 121
VV L E + L LV M+ DLK +I Q G P ++
Sbjct: 244 R-FVVSL-----AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEI 295
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
C G+ H I++RDLKP N+L+D ++I+DLGLA + + T+ Y A
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGH-IRISDLGLA-VHVPEGQTIKGRVGTVGYMA 353
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PEV + + Y+ + D W++ C+ E++ G S QQ R E+V V
Sbjct: 354 PEV-VKNERYTFSPDWWALGCLLYEMIA------GQSPFQQ-----RKKKIKREEVERLV 401
Query: 242 SSLMNWHEYPQ-WNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRI-----SAKKAMEHPY 295
+ EY + ++PQ+ + L Q+L DP++R+ SA++ EHP
Sbjct: 402 KEVP--EEYSERFSPQARS------------LCSQLLCKDPAERLGCRGGSAREVKEHPL 447
Query: 296 FDDLDKTRL 304
F L+ RL
Sbjct: 448 FKKLNFKRL 456
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 128/299 (42%), Gaps = 43/299 (14%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D FEK+ ++G G G V++ K +G ++A K L E + +RE+ +L +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECN-S 66
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P++V + + ++ +D LKK R Q + + +K L Y K
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 126
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAP 182
H I+HRD+KP N+L++ + +K+ D G++ I + +E + T Y +P
Sbjct: 127 -------HKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQL---IDEMANEFVGTRSYMSP 175
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG-TPNEKVWPGV 241
E L G THYS D+WS+ E+ P + IF LL NE
Sbjct: 176 ERLQG-THYSVQSDIWSMGLSLVEMAVGRYPRPP-------MAIFELLDYIVNEP----- 222
Query: 242 SSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLD 300
P L +AV +L+ D + + L +P++R K+ M H + D
Sbjct: 223 -------------PPKLPSAVFSLEFQ--DFVNKCLIKNPAERADLKQLMVHAFIKRSD 266
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALK--KTRLHEDDEGVPPTTLREVSILRMLSRD 63
F+ L +G G+Y KV R K T +I A+K K L DDE + E + S
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDI-DWVQTEKHVFEQASNH 65
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P +V L Q +++ L+ V EY++ DL +++ R+ +P + ++
Sbjct: 66 PFLVGLHSCFQTESR-----LFFVIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEIS 116
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+ + H GI++RDLK N+L+D + +K+ D G+ + P + T Y AP
Sbjct: 117 LALNYLHERGIIYRDLKLDNVLLDSEG-HIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAP 175
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALF 214
E+L G Y +VD W++ + E++ + F
Sbjct: 176 EILRGED-YGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALK--KTRLHEDDEGVPPTTLREVSILRMLSRD 63
F+ L +G G+Y KV R K T +I A+K K L DDE + E + S
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDI-DWVQTEKHVFEQASNH 69
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P +V L Q +++ L+ V EY++ DL +++ R+ +P + ++
Sbjct: 70 PFLVGLHSCFQTESR-----LFFVIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEIS 120
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+ + H GI++RDLK N+L+D + +K+ D G+ + P + T Y AP
Sbjct: 121 LALNYLHERGIIYRDLKLDNVLLDSEG-HIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAP 179
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALF 214
E+L G Y +VD W++ + E++ + F
Sbjct: 180 EILRGED-YGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 100/218 (45%), Gaps = 32/218 (14%)
Query: 6 FEKLEKVGEGTYGKV----YRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSIL 57
+K+ +GEG +GKV Y TG++VA+K + EG P RE+ IL
Sbjct: 11 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-----EGCGPQLRSGWQREIEIL 65
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
R L + H+V+ + Q G + LV EY+ + S R V + L
Sbjct: 66 RTLYHE-HIVKYKGCCEDQ---GEKSVQLVMEYVP------LGSLRDYLPRHCVGLAQLL 115
Query: 118 MY--QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKY----T 171
++ Q+C+G+A+ H +HR L N+L+D + +KI D GLA+A + Y
Sbjct: 116 LFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRL-VKIGDFGLAKAVPEGHEYYRVRED 174
Query: 172 HEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ WY APE L Y A D+WS EL+T
Sbjct: 175 GDSPVFWY-APECLKECKFY-YASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 100/218 (45%), Gaps = 32/218 (14%)
Query: 6 FEKLEKVGEGTYGKV----YRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSIL 57
+K+ +GEG +GKV Y TG++VA+K + EG P RE+ IL
Sbjct: 10 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-----EGCGPQLRSGWQREIEIL 64
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
R L + H+V+ + Q G + LV EY+ + S R V + L
Sbjct: 65 RTLYHE-HIVKYKGCCEDQ---GEKSVQLVMEYVP------LGSLRDYLPRHCVGLAQLL 114
Query: 118 MY--QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKY----T 171
++ Q+C+G+A+ H +HR L N+L+D + +KI D GLA+A + Y
Sbjct: 115 LFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRL-VKIGDFGLAKAVPEGHEYYRVRED 173
Query: 172 HEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ WY APE L Y A D+WS EL+T
Sbjct: 174 GDSPVFWY-APECLKECKFY-YASDVWSFGVTLYELLT 209
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 115/249 (46%), Gaps = 22/249 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D FEK+ ++G G G V++ K +G ++A K L E + +RE+ +L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECN-S 63
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P++V + + ++ +D LKK R Q + + +K L Y K
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAP 182
H I+HRD+KP N+L++ + +K+ D G++ I + + T Y +P
Sbjct: 124 -------HKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQL---IDSMANSFVGTRSYMSP 172
Query: 183 EVLLGSTHYSTAVDMWSVACIFAEL-VTKTALFPGDS--ELQQLLHIFRLL----GTPNE 235
E L G THYS D+WS+ E+ V + + P D+ + + + IF LL P
Sbjct: 173 ERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPP 231
Query: 236 KVWPGVSSL 244
K+ GV SL
Sbjct: 232 KLPSGVFSL 240
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 128/303 (42%), Gaps = 49/303 (16%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D E + ++G G YG V + R +G+I+A+K+ R T+ R+L
Sbjct: 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIR----------ATVNSQEQKRLLMDL 100
Query: 64 PHVVRLMDVK------QGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+R +D +EG +++ E MDT L K+ + G+ IP + + +
Sbjct: 101 DISMRTVDCPFTVTFYGALFREGD--VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKI 158
Query: 118 MYQLCKGVAFCHGH-GILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT 176
+ K + H ++HRD+KP N+L++ +K+ D G++ + K T +
Sbjct: 159 AVSIVKALEHLHSKLSVIHRDVKPSNVLIN-ALGQVKMCDFGISGYLVDSVAK-TIDAGC 216
Query: 177 LWYRAPEVL---LGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 233
Y APE + L YS D+WS+ EL FP DS GTP
Sbjct: 217 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELA--ILRFPYDS-----------WGTP 263
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 293
++ L E P +PQ A + +D Q L+ + +R + + M+H
Sbjct: 264 FQQ-------LKQVVEEP--SPQLPAD---KFSAEFVDFTSQCLKKNSKERPTYPELMQH 311
Query: 294 PYF 296
P+F
Sbjct: 312 PFF 314
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALK--KTRLHEDDEGVPPTTLREVSILRMLSRD 63
F+ L +G G+Y KV R K T +I A+K K L DDE + E + S
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQT-EKHVFEQASNH 80
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P +V L Q +++ L+ V EY++ DL +++ R+ +P + ++
Sbjct: 81 PFLVGLHSCFQTESR-----LFFVIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEIS 131
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+ + H GI++RDLK N+L+D + +K+ D G+ + P + T Y AP
Sbjct: 132 LALNYLHERGIIYRDLKLDNVLLDSEG-HIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAP 190
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALF 214
E+L G Y +VD W++ + E++ + F
Sbjct: 191 EILRGED-YGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 125/299 (41%), Gaps = 46/299 (15%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D +E ++ +G G +G R+K ++VA+K E E + RE+ R L R
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYI---ERGEKIDENVKREIINHRSL-RH 74
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++VR +V T L +V EY +L + I + + E+ + QL
Sbjct: 75 PNIVRFKEVILTP-----THLAIVMEYASGGELFERICNAGRFSED----EARFFFQQLI 125
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMT-LKIADLGLARAFTLPIKKYTHEILTLWYRA 181
GV++ H + HRDLK N L+D LKIAD G ++A L + + + T Y A
Sbjct: 126 SGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKS-AVGTPAYIA 184
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLH-IFRLLGTPNEKVWPG 240
PEVLL + D+WS ++ F E + I R+L
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL---------- 234
Query: 241 VSSLMNWHEYPQWNPQSLATAVPN---LDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
++ A+P+ + + L+ ++ DP+KRIS + H +F
Sbjct: 235 ----------------NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT--TLREVSILRMLSRDPHVV 67
E +G G +GKVYRA G VA+K R H+ DE + T +R+ + L + + P+++
Sbjct: 13 EIIGIGGFGKVYRAF--WIGDEVAVKAAR-HDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAF 127
L V + L LV E+ + S G+ IP + + + Q+ +G+ +
Sbjct: 70 ALRGVCLKEPN-----LCLVMEFARGGPLNRVLS----GKRIPPDILVNWAVQIARGMNY 120
Query: 128 CHGHGI---LHRDLKPHNLLM-------DRKTMTLKIADLGLARAFTLPIKKYTHEILTL 177
H I +HRDLK N+L+ D LKI D GLAR + K
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYA- 179
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPG 216
+ APEV+ S +S D+WS + EL+T F G
Sbjct: 180 -WMAPEVIRASM-FSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 111/244 (45%), Gaps = 30/244 (12%)
Query: 9 LEKVGEGTYGKVYRAREKA----TGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
+ ++G+G +G V R TG +VA+K+ + D+ RE+ IL+ L D
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR--DFQREIQILKALHSD- 71
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY--QLC 122
+V+ V G GR L LV EY+ + +R F Q ++ + L+Y Q+C
Sbjct: 72 FIVKYRGVSYG---PGRQSLRLVMEYLPSGC---LRDFLQR-HRARLDASRLLLYSSQIC 124
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLW 178
KG+ + +HRDL N+L++ + +KIAD GLA+ L Y + W
Sbjct: 125 KGMEYLGSRRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPIFW 183
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y APE L + +S D+WS + EL T D R++G+ E+
Sbjct: 184 Y-APESLSDNI-FSRQSDVWSFGVVLYELFTYC-----DKSCSPSAEFLRMMGS--ERDV 234
Query: 239 PGVS 242
P +S
Sbjct: 235 PALS 238
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 126/298 (42%), Gaps = 37/298 (12%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D FEK+ ++G G G V++ K +G ++A K L E + +RE+ +L +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECN-S 82
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P++V + + ++ +D LKK R Q + + +K L Y K
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 142
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
H I+HRD+KP N+L++ + +K+ D G++ + + T Y +PE
Sbjct: 143 -------HKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMANSF--VGTRSYMSPE 192
Query: 184 VLLGSTHYSTAVDMWSVACIFAEL-VTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
L G THYS D+WS+ E+ V + + G + + ++ P K+ GV
Sbjct: 193 RLQG-THYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVF 251
Query: 243 SLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLD 300
SL E+ D + + L +P++R K+ M H + D
Sbjct: 252 SL----EFQ-------------------DFVNKCLIKNPAERADLKQLMVHAFIKRSD 286
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 134/328 (40%), Gaps = 64/328 (19%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR--DPHVVRL 69
+G+G+YG V A E T I A+K ++ + P R + +R++ + P++ RL
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 70 MDVKQGQ------------------------NKEGRTVLYLVF-------EYMDTDLKKY 98
+V + + + G+ + +V E + +
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 99 IRSFRQTGENIPVNT-VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMD-RKTMTLKIAD 156
I FR++ + + + ++M Q+ + + H GI HRD+KP N L K+ +K+ D
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVD 213
Query: 157 LGLARAF-TLPIKKY---THEILTLWYRAPEVLLGSTH-YSTAVDMWSVACIFAELVTKT 211
GL++ F L +Y T + T ++ APEVL + Y D WS + L+
Sbjct: 214 FGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGA 273
Query: 212 ALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLD 271
FPG ++ + + N+K+ E P +N L D
Sbjct: 274 VPFPGVNDADTISQVL------NKKL---------CFENPNYNV---------LSPLARD 309
Query: 272 LLEQMLQYDPSKRISAKKAMEHPYFDDL 299
LL +L + +R A +A++HP+
Sbjct: 310 LLSNLLNRNVDERFDAMRALQHPWISQF 337
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 125/299 (41%), Gaps = 46/299 (15%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D +E ++ +G G +G R+K + ++VA+K E E + RE+ R L R
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI---ERGEKIDENVKREIINHRSL-RH 74
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++VR +V T L +V EY +L + I + + E+ + QL
Sbjct: 75 PNIVRFKEVILTP-----THLAIVMEYASGGELFERICNAGRFSED----EARFFFQQLI 125
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMT-LKIADLGLARAFTLPIKKYTHEILTLWYRA 181
GV++CH + HRDLK N L+D LKI G +++ L + + + T Y A
Sbjct: 126 SGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKS-TVGTPAYIA 184
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLH-IFRLLGTPNEKVWPG 240
PEVLL + D+WS ++ F E + I R+L
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL---------- 234
Query: 241 VSSLMNWHEYPQWNPQSLATAVPN---LDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
++ A+P+ + + L+ ++ DP+KRIS + H +F
Sbjct: 235 ----------------NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 134/298 (44%), Gaps = 36/298 (12%)
Query: 6 FEKLEKVGEGTYGKV----YRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
+++ +GEG +GKV Y TG+ VA+K + + +E+ ILR L
Sbjct: 11 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLK-KEIEILRNLY 69
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMY- 119
+ ++ K ++G + L+ E++ + LK+Y+ + +N + L Y
Sbjct: 70 HE----NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-----INLKQQLKYA 120
Query: 120 -QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEI 174
Q+CKG+ + +HRDL N+L++ + +KI D GL +A + T +
Sbjct: 121 VQICKGMDYLGSRQYVHRDLAARNVLVESEHQ-VKIGDFGLTKAIETDKEXXTVKDDRDS 179
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
WY APE L+ S Y A D+WS EL+T DS+ + +++G +
Sbjct: 180 PVFWY-APECLMQSKFY-IASDVWSFGVTLHELLTYC-----DSDSSPMALFLKMIGPTH 232
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME 292
++ V+ L+N + + P PN + L+ + ++ PS R S + +E
Sbjct: 233 GQM--TVTRLVNTLKEGKRLP-----CPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 283
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 106/229 (46%), Gaps = 23/229 (10%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM- 70
+ EG + VY A++ +G+ ALK RL ++E ++EV ++ LS P++V+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALK--RLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 71 --DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFC 128
+ + ++ G+ L+ E L ++++ G + +TV + YQ C+ V
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGP-LSCDTVLKIFYQTCRAVQHM 152
Query: 129 HGHG--ILHRDLKPHNLLMDRKTMTLKIADLGLARAFT------------LPIKKYTHEI 174
H I+HRDLK NLL+ + T+K+ D G A + +++
Sbjct: 153 HRQKPPIIHRDLKVENLLLSNQG-TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRN 211
Query: 175 LTLWYRAPEVLLGSTHYSTA--VDMWSVACIFAELVTKTALFPGDSELQ 221
T YR PE++ +++ D+W++ CI L + F ++L+
Sbjct: 212 TTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR 260
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 134/298 (44%), Gaps = 36/298 (12%)
Query: 6 FEKLEKVGEGTYGKV----YRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
+++ +GEG +GKV Y TG+ VA+K + + +E+ ILR L
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLK-KEIEILRNLY 81
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMY- 119
+ ++ K ++G + L+ E++ + LK+Y+ + +N + L Y
Sbjct: 82 HE----NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-----INLKQQLKYA 132
Query: 120 -QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEI 174
Q+CKG+ + +HRDL N+L++ + +KI D GL +A + T +
Sbjct: 133 VQICKGMDYLGSRQYVHRDLAARNVLVESEHQ-VKIGDFGLTKAIETDKEXXTVKDDRDS 191
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
WY APE L+ S Y A D+WS EL+T DS+ + +++G +
Sbjct: 192 PVFWY-APECLMQSKFY-IASDVWSFGVTLHELLTYC-----DSDSSPMALFLKMIGPTH 244
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME 292
++ V+ L+N + + P PN + L+ + ++ PS R S + +E
Sbjct: 245 GQM--TVTRLVNTLKEGKRLP-----CPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALK--KTRLHEDDEGVPPTTLREVSILRMLSRD 63
F+ L +G G+Y KV R K T +I A++ K L DDE + E + S
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQT-EKHVFEQASNH 112
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P +V L Q +++ L+ V EY++ DL +++ R+ +P + ++
Sbjct: 113 PFLVGLHSCFQTESR-----LFFVIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEIS 163
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+ + H GI++RDLK N+L+D + +K+ D G+ + P + T Y AP
Sbjct: 164 LALNYLHERGIIYRDLKLDNVLLDSEG-HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAP 222
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALF 214
E+L G Y +VD W++ + E++ + F
Sbjct: 223 EILRGED-YGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 21/209 (10%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDPH 65
E++G G +G+V+ R +A +VA+K R E +PP L+E IL+ S P+
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCR-----ETLPPDLKAKFLQEARILKQYSH-PN 173
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
+VRL+ V + +Y+V E + ++ R G + V T+ ++ G+
Sbjct: 174 IVRLIGVCTQKQP-----IYIVMELVQGG--DFLTFLRTEGARLRVKTLLQMVGDAAAGM 226
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI--LTLWYRAPE 183
+ +HRDL N L+ K + LKI+D G++R + + + + + + APE
Sbjct: 227 EYLESKCCIHRDLAARNCLVTEKNV-LKISDFGMSREEADGVXAASGGLRQVPVKWTAPE 285
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVTKTA 212
L YS+ D+WS + E + A
Sbjct: 286 A-LNYGRYSSESDVWSFGILLWETFSLGA 313
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 16/234 (6%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D FEK+ ++G G G V++ K +G ++A K L E + +RE+ +L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECN-S 63
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P++V + + ++ +D LKK R Q + + +K L Y K
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAP 182
H I+HRD+KP N+L++ + +K+ D G++ I + + T Y +P
Sbjct: 124 -------HKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQL---IDSMANSFVGTRSYMSP 172
Query: 183 EVLLGSTHYSTAVDMWSVACIFAEL-VTKTALFPGDSELQQLLHIFRLLGTPNE 235
E L G THYS D+WS+ E+ V + + P D++ +L+ ++ G E
Sbjct: 173 ERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 9 LEKVGEGTYGKVYRAREKA----TGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
+ ++G+G +G V R TG +VA+K+ + D+ RE+ IL+ L D
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR--DFQREIQILKALHSD- 72
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY--QLC 122
+V+ V G GR L LV EY+ + +R F Q ++ + L+Y Q+C
Sbjct: 73 FIVKYRGVSYG---PGRQSLRLVMEYLPSGC---LRDFLQR-HRARLDASRLLLYSSQIC 125
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLW 178
KG+ + +HRDL N+L++ + +KIAD GLA+ L Y + W
Sbjct: 126 KGMEYLGSRRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPIFW 184
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
Y APE L + +S D+WS + EL T
Sbjct: 185 Y-APESLSDNI-FSRQSDVWSFGVVLYELFT 213
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 135/316 (42%), Gaps = 35/316 (11%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D FEK+ ++G G G V++ K +G ++A K L E + +RE+ +L +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECN-S 125
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P++V + + ++ +D LKK R Q + + +K L Y K
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 185
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAP 182
H I+HRD+KP N+L++ + +K+ D G++ I + + T Y +P
Sbjct: 186 -------HKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQL---IDSMANSFVGTRSYMSP 234
Query: 183 EVLLGSTHYSTAVDMWSVACIFAEL-VTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
E L G THYS D+WS+ E+ V + + P D++ +L+ ++ G E
Sbjct: 235 ERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPR 293
Query: 242 SSLMNWHEYPQWN-----------------PQSLATAVPNLDKDGLDLLEQMLQYDPSKR 284
+ Y + P L +AV +L+ D + + L +P++R
Sbjct: 294 TPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQ--DFVNKCLIKNPAER 351
Query: 285 ISAKKAMEHPYFDDLD 300
K+ M H + D
Sbjct: 352 ADLKQLMVHAFIKRSD 367
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 16/234 (6%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D FEK+ ++G G G V++ K +G ++A K L E + +RE+ +L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECN-S 63
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P++V + + ++ +D LKK R Q + + +K L Y K
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAP 182
H I+HRD+KP N+L++ + +K+ D G++ I + + T Y +P
Sbjct: 124 -------HKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQL---IDSMANSFVGTRSYMSP 172
Query: 183 EVLLGSTHYSTAVDMWSVACIFAEL-VTKTALFPGDSELQQLLHIFRLLGTPNE 235
E L G THYS D+WS+ E+ V + + P D++ +L+ ++ G E
Sbjct: 173 ERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 110/244 (45%), Gaps = 30/244 (12%)
Query: 9 LEKVGEGTYGKVYRAREKA----TGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
+ ++G+G +G V R TG +VA+K+ + D+ RE+ IL+ L D
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR--DFQREIQILKALHSD- 84
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY--QLC 122
+V+ V G GR L LV EY+ + +R F Q ++ + L+Y Q+C
Sbjct: 85 FIVKYRGVSYG---PGRQSLRLVMEYLPSGC---LRDFLQR-HRARLDASRLLLYSSQIC 137
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLW 178
KG+ + +HRDL N+L++ + +KIAD GLA+ L Y + W
Sbjct: 138 KGMEYLGSRRCVHRDLAARNILVESEA-HVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 196
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y APE L + +S D+WS + EL T D R++G E+
Sbjct: 197 Y-APESLSDNI-FSRQSDVWSFGVVLYELFTYC-----DKSCSPSAEFLRMMGC--ERDV 247
Query: 239 PGVS 242
P +S
Sbjct: 248 PALS 251
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 16/234 (6%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D FEK+ ++G G G V++ K +G ++A K L E + +RE+ +L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECN-S 63
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P++V + + ++ +D LKK R Q + + +K L Y K
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAP 182
H I+HRD+KP N+L++ + +K+ D G++ I + + T Y +P
Sbjct: 124 -------HKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQL---IDSMANSFVGTRSYMSP 172
Query: 183 EVLLGSTHYSTAVDMWSVACIFAEL-VTKTALFPGDSELQQLLHIFRLLGTPNE 235
E L G THYS D+WS+ E+ V + + P D++ +L+ ++ G E
Sbjct: 173 ERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 16/234 (6%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D FEK+ ++G G G V++ K +G ++A K L E + +RE+ +L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECN-S 63
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P++V + + ++ +D LKK R Q + + +K L Y K
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAP 182
H I+HRD+KP N+L++ + +K+ D G++ I + + T Y +P
Sbjct: 124 -------HKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQL---IDSMANSFVGTRSYMSP 172
Query: 183 EVLLGSTHYSTAVDMWSVACIFAEL-VTKTALFPGDSELQQLLHIFRLLGTPNE 235
E L G THYS D+WS+ E+ V + + P D++ +L+ ++ G E
Sbjct: 173 ERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 28/221 (12%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL 69
E +G+G +G+ + + TG+++ +K+ L DE T L+EV ++R L P+V++
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKE--LIRFDEETQRTFLKEVKVMRCLEH-PNVLKF 72
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFC 128
+ V + L + EY+ L+ I+S P + S + G+A+
Sbjct: 73 IGVLYKDKR-----LNFITEYIKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYL 124
Query: 129 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLA-------------RAFTLPIKKYTHEIL 175
H I+HRDL HN L+ R+ + +AD GLA R+ P +K + ++
Sbjct: 125 HSMNIIHRDLNSHNCLV-RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFP 215
++ APE++ G + Y VD++S + E++ + P
Sbjct: 184 GNPYWMAPEMINGRS-YDEKVDVFSFGIVLCEIIGRVNADP 223
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 25/248 (10%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVP-PTTLREVSILRMLSRDP 64
F L ++G G++G VY AR+ ++VA+KK ++EV L+ L R P
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHP 114
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
+ ++ ++ +LV EY + ++ + + + V + +G
Sbjct: 115 NTIQYRGCYLREH-----TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAV---THGALQG 166
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
+A+ H H ++HRD+K N+L+ + +K+ D G A + P + + T ++ APEV
Sbjct: 167 LAYLHSHNMIHRDVKAGNILLSEPGL-VKLGDFGSA-SIMAPANXF---VGTPYWMAPEV 221
Query: 185 LLG--STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
+L Y VD+WS+ EL + + + L HI + NE P +
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-----NES--PALQ 274
Query: 243 SLMNWHEY 250
S +W EY
Sbjct: 275 S-GHWSEY 281
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 16/223 (7%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
M + +E ++ +G G +G+V R K+T K+ A+K E + E +
Sbjct: 71 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 130
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMY 119
+ P VV+L Q LY+V EYM DL + ++ ++P +
Sbjct: 131 ANSPWVVQLFYAFQDDR-----YLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTA 180
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP-IKKYTHEILTLW 178
++ + H G +HRD+KP N+L+D K+ LK+AD G + + + T
Sbjct: 181 EVVLALDAIHSMGFIHRDVKPDNMLLD-KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 239
Query: 179 YRAPEVLL---GSTHYSTAVDMWSVACIFAELVTKTALFPGDS 218
Y +PEVL G +Y D WSV E++ F DS
Sbjct: 240 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 282
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML----- 60
F+++E +G G +G+V++A+ + GK +++ + + + L ++ + ++
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGC 73
Query: 61 ----------SRDPHVVRLMDVKQGQN--KEGRTVLYLVFEYMDTD-LKKYIRSFRQTGE 107
S D D + +N + L++ E+ D L+++I R GE
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GE 131
Query: 108 NIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPI 167
+ L Q+ KGV + H ++HRDLKP N+ + T +KI D GL +
Sbjct: 132 KLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDG 190
Query: 168 KKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELV 208
K+ T TL Y +PE + S Y VD++++ I AEL+
Sbjct: 191 KR-TRSKGTLRYMSPE-QISSQDYGKEVDLYALGLILAELL 229
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 16/223 (7%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
M + +E ++ +G G +G+V R K+T K+ A+K E + E +
Sbjct: 66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 125
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMY 119
+ P VV+L Q LY+V EYM DL + ++ ++P +
Sbjct: 126 ANSPWVVQLFYAFQDDR-----YLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTA 175
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP-IKKYTHEILTLW 178
++ + H G +HRD+KP N+L+D K+ LK+AD G + + + T
Sbjct: 176 EVVLALDAIHSMGFIHRDVKPDNMLLD-KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 234
Query: 179 YRAPEVLL---GSTHYSTAVDMWSVACIFAELVTKTALFPGDS 218
Y +PEVL G +Y D WSV E++ F DS
Sbjct: 235 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 277
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 124/299 (41%), Gaps = 46/299 (15%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D +E ++ +G G +G R+K + ++VA+K E E + RE+ R L R
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI---ERGEKIDENVKREIINHRSL-RH 74
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++VR +V T L +V EY +L + I + + E+ + QL
Sbjct: 75 PNIVRFKEVILTP-----THLAIVMEYASGGELFERICNAGRFSED----EARFFFQQLI 125
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMT-LKIADLGLARAFTLPIKKYTHEILTLWYRA 181
GV++CH + HRDLK N L+D LKI G +++ L + + T Y A
Sbjct: 126 SGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLH-SQPKDTVGTPAYIA 184
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLH-IFRLLGTPNEKVWPG 240
PEVLL + D+WS ++ F E + I R+L
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL---------- 234
Query: 241 VSSLMNWHEYPQWNPQSLATAVPN---LDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
++ A+P+ + + L+ ++ DP+KRIS + H +F
Sbjct: 235 ----------------NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 20/213 (9%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDD---EGVPPTTLREVSILRM--- 59
F+++E +G G +G+V++A+ + GK +K+ + + + E L V+I+
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGC 72
Query: 60 ---LSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVK 115
DP + ++ L++ E+ D L+++I R GE +
Sbjct: 73 WDGFDYDPETS-----SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLAL 125
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
L Q+ KGV + H +++RDLKP N+ + T +KI D GL + K+ +
Sbjct: 126 ELFEQITKGVDYIHSKKLINRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRXRSK-G 183
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELV 208
TL Y +PE + S Y VD++++ I AEL+
Sbjct: 184 TLRYMSPE-QISSQDYGKEVDLYALGLILAELL 215
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 126/297 (42%), Gaps = 37/297 (12%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D E + ++G G YG V + R +G+I+A+K+ R + + L ++ I
Sbjct: 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE-QKRLLMDLDISMRTVDC 65
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P V +EG +++ E MDT L K+ + G+ IP + + + + K
Sbjct: 66 PFTVTFYG---ALFREGD--VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVK 120
Query: 124 GVAFCHGH-GILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+ H ++HRD+KP N+L++ +K+ D G++ + K + Y AP
Sbjct: 121 ALEHLHSKLSVIHRDVKPSNVLIN-ALGQVKMCDFGISGYLVDDVAKDI-DAGCKPYMAP 178
Query: 183 EVL---LGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWP 239
E + L YS D+WS+ EL FP DS GTP ++
Sbjct: 179 ERINPELNQKGYSVKSDIWSLGITMIELA--ILRFPYDS-----------WGTPFQQ--- 222
Query: 240 GVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
L E P +PQ A + +D Q L+ + +R + + M+HP+F
Sbjct: 223 ----LKQVVEEP--SPQLPAD---KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 16/223 (7%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
M + +E ++ +G G +G+V R K+T K+ A+K E + E +
Sbjct: 71 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 130
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMY 119
+ P VV+L Q LY+V EYM DL + ++ ++P +
Sbjct: 131 ANSPWVVQLFYAFQDDR-----YLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTA 180
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP-IKKYTHEILTLW 178
++ + H G +HRD+KP N+L+D K+ LK+AD G + + + T
Sbjct: 181 EVVLALDAIHSMGFIHRDVKPDNMLLD-KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 239
Query: 179 YRAPEVLL---GSTHYSTAVDMWSVACIFAELVTKTALFPGDS 218
Y +PEVL G +Y D WSV E++ F DS
Sbjct: 240 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 282
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 16/234 (6%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D FEK+ ++G G G V++ K +G ++A K L E + +RE+ +L +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECN-S 90
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P++V + + ++ +D LKK R Q + + +K L Y K
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 150
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAP 182
H I+HRD+KP N+L++ + +K+ D G++ I + + T Y +P
Sbjct: 151 -------HKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQL---IDSMANSFVGTRSYMSP 199
Query: 183 EVLLGSTHYSTAVDMWSVACIFAEL-VTKTALFPGDSELQQLLHIFRLLGTPNE 235
E L G THYS D+WS+ E+ V + + P D++ +L+ ++ G E
Sbjct: 200 ERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 252
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 110/248 (44%), Gaps = 25/248 (10%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVP-PTTLREVSILRMLSRDP 64
F L ++G G++G VY AR+ ++VA+KK ++EV L+ L R P
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHP 75
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
+ ++ ++ +LV EY + ++ + + + V + +G
Sbjct: 76 NTIQYRGCYLREH-----TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAV---THGALQG 127
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
+A+ H H ++HRD+K N+L+ + +K+ D G A + P + + T ++ APEV
Sbjct: 128 LAYLHSHNMIHRDVKAGNILLSEPGL-VKLGDFGSA-SIMAPANXF---VGTPYWMAPEV 182
Query: 185 LLG--STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 242
+L Y VD+WS+ EL + + + L HI NE P +
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI-----AQNES--PALQ 235
Query: 243 SLMNWHEY 250
S +W EY
Sbjct: 236 S-GHWSEY 242
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + TG A+K D + V TL E IL
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +K+AD G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IKVADFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 17/225 (7%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTL----REVSILRM 59
D +E E +G G +V+ AR+ + VA+K R D P+ RE
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRA---DLARDPSFYLRFRREAQNAAA 68
Query: 60 LSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY 119
L+ P +V + + + G + Y+V EY+D + I G P ++ ++
Sbjct: 69 LNH-PAIVAVYATGEAETPAG-PLPYIVMEYVDGVTLRDI--VHTEGPMTPKRAIE-VIA 123
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILT 176
C+ + F H +GI+HRD+KP N+++ T +K+ D G+ARA T I T
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
Y +PE G + D++S+ C+ E++T F GDS +
Sbjct: 183 AQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 21/209 (10%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDPH 65
E++G G +G+V+ R +A +VA+K R E +PP L+E IL+ S P+
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCR-----ETLPPDLKAKFLQEARILKQYSH-PN 173
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
+VRL+ V + +Y+V E + ++ R G + V T+ ++ G+
Sbjct: 174 IVRLIGVCTQKQP-----IYIVMELVQGG--DFLTFLRTEGARLRVKTLLQMVGDAAAGM 226
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI--LTLWYRAPE 183
+ +HRDL N L+ K + LKI+D G++R + + + + + + APE
Sbjct: 227 EYLESKCCIHRDLAARNCLVTEKNV-LKISDFGMSREEADGVYAASGGLRQVPVKWTAPE 285
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVTKTA 212
L YS+ D+WS + E + A
Sbjct: 286 A-LNYGRYSSESDVWSFGILLWETFSLGA 313
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 28/216 (12%)
Query: 6 FEKLEKVGEGTYGKV----YRAREKATGKIVALKKTRLHEDDEGVPPTT--LREVSILRM 59
+K+ +GEG +GKV Y TG++VA+K + D G + +E+ ILR
Sbjct: 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKA---DAGPQHRSGWKQEIDILRT 89
Query: 60 LSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY 119
L + H+++ K G L LV EY+ + S R + + L++
Sbjct: 90 LYHE-HIIK---YKGCCEDAGAASLQLVMEYVP------LGSLRDYLPRHSIGLAQLLLF 139
Query: 120 --QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKY----THE 173
Q+C+G+A+ H +HRDL N+L+D + +KI D GLA+A + Y +
Sbjct: 140 AQQICEGMAYLHAQHYIHRDLAARNVLLDNDRL-VKIGDFGLAKAVPEGHEXYRVREDGD 198
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
WY APE L Y A D+WS EL+T
Sbjct: 199 SPVFWY-APECLKEYKFY-YASDVWSFGVTLYELLT 232
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 114/237 (48%), Gaps = 23/237 (9%)
Query: 6 FEKLEKVGEGTYGKVYRAREKA---TGKIVA---LKKTRLHEDDEGVPPTTLREVSILRM 59
FE L+ +G+G++GKV+ R+ +G + A LKK L D T E IL
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDR---VRTKMERDILAD 86
Query: 60 LSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLM 118
++ P VV+L Q + K LYL+ +++ DL + R ++ VK +
Sbjct: 87 VNH-PFVVKLHYAFQTEGK-----LYLILDFLRGGDL--FTRLSKEV--MFTEEDVKFYL 136
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+L G+ H GI++RDLKP N+L+D + +K+ D GL++ KK T+
Sbjct: 137 AELALGLDHLHSLGIIYRDLKPENILLDEEGH-IKLTDFGLSKEAIDHEKKAYSFCGTVE 195
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL-LGTPN 234
Y APEV+ H S + D WS + E++T + F G + + I + LG P
Sbjct: 196 YMAPEVVNRQGH-SHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ 251
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 9 LEKVGEGTYGKVYRAREKA----TGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
+ ++G+G +G V R TG +VA+K+ + D+ RE+ IL+ L D
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR--DFQREIQILKALHSD- 68
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY--QLC 122
+V+ V G GR L LV EY+ + +R F Q ++ + L+Y Q+C
Sbjct: 69 FIVKYRGVSYG---PGRPELRLVMEYLPSGC---LRDFLQR-HRARLDASRLLLYSSQIC 121
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTL----PIKKYTHEILTLW 178
KG+ + +HRDL N+L++ + +KIAD GLA+ L + + + W
Sbjct: 122 KGMEYLGSRRCVHRDLAARNILVESEA-HVKIADFGLAKLLPLDKDXXVVREPGQSPIFW 180
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
Y APE L +S D+WS + EL T
Sbjct: 181 Y-APES-LSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 138/292 (47%), Gaps = 44/292 (15%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
F KLE++G+G++G+V++ + T ++VA+K L E ++ + +E+++L +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSS-Y 82
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVN--TVKSLMYQLCK 123
V + G +G + L+++ EY+ + G P + + +++ ++ K
Sbjct: 83 VTKYY----GSYLKG-SKLWIIMEYLGGG---SALDLLRAG---PFDEFQIATMLKEILK 131
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
G+ + H +HRD+K N+L+ + +K+AD G+A T K + T ++ APE
Sbjct: 132 GLDYLHSEKKIHRDIKAANVLLSEQG-DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 190
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS 243
V+ S Y + D+WS+ EL P +S++ + +F +
Sbjct: 191 VIQQSA-YDSKADIWSLGITAIELAKGE---PPNSDMHPMRVLFLI-------------- 232
Query: 244 LMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
P+ NP +L V + K + ++ L DPS R +AK+ ++H +
Sbjct: 233 -------PKNNPPTL---VGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKF 274
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDP 64
L ++G+G++G VY + K A + + +E L E S+++ +
Sbjct: 19 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH- 77
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIP------VNTVKSLM 118
HVVRL+ G +G+ L ++ DLK Y+RS R EN P + + +
Sbjct: 78 HVVRLL----GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 133
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILT 176
++ G+A+ + +HRDL N ++ T+KI D G+ R T +K +L
Sbjct: 134 AEIADGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIXETDXXRKGGKGLLP 192
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ + APE L ++T+ DMWS + E+ +
Sbjct: 193 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITS 224
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDP 64
L ++G+G++G VY + K A + + +E L E S+++ +
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH- 80
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIP------VNTVKSLM 118
HVVRL+ G +G+ L ++ DLK Y+RS R EN P + + +
Sbjct: 81 HVVRLL----GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILT 176
++ G+A+ + +HRDL N ++ T+KI D G+ R T +K +L
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ + APE L ++T+ DMWS + E+ +
Sbjct: 196 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDP 64
L ++G+G++G VY + K A + + +E L E S+++ +
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH- 80
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIP------VNTVKSLM 118
HVVRL+ G +G+ L ++ DLK Y+RS R EN P + + +
Sbjct: 81 HVVRLL----GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILT 176
++ G+A+ + +HRDL N ++ T+KI D G+ R T +K +L
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ + APE L ++T+ DMWS + E+ +
Sbjct: 196 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDP 64
L ++G+G++G VY + K A + + +E L E S+++ +
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH- 80
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIP------VNTVKSLM 118
HVVRL+ G +G+ L ++ DLK Y+RS R EN P + + +
Sbjct: 81 HVVRLL----GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILT 176
++ G+A+ + +HRDL N ++ T+KI D G+ R T +K +L
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIYETAYYRKGGKGLLP 195
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ + APE L ++T+ DMWS + E+ +
Sbjct: 196 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 112/224 (50%), Gaps = 22/224 (9%)
Query: 84 LYLVFEYMDTD-LKKYIRSFRQTGEN----IPVNTVKSLMYQLCKGVAFCHGH-GILHRD 137
+Y+++EYM+ D + K+ F +N IP+ +K ++ + ++ H I HRD
Sbjct: 118 VYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRD 177
Query: 138 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTA-VD 196
+KP N+LMD K +K++D G + + KK T + PE + Y+ A VD
Sbjct: 178 VKPSNILMD-KNGRVKLSDFGESEY--MVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVD 234
Query: 197 MWSVA-CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP 255
+WS+ C++ + P ++ L+ +F + T N + +P N YP N
Sbjct: 235 IWSLGICLYVMFYN---VVPFSLKI-SLVELFNNIRTKNIE-YPLDR---NHFLYPLTNK 286
Query: 256 QSLATAVPN-LDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDD 298
+S T N L + +D L+ L+ +P++RI+++ A++H + D
Sbjct: 287 KS--TCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLAD 328
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + K TG A+K D + V TL E IL
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 88
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 89 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFSE----PHAR 137
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 138 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 192
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 193 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 238
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 37/231 (16%)
Query: 12 VGEGTYGKVYRA----------REKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
+GEG +G+V A +E T + LK ED + + E+ +++M+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDL----VSEMEMMKMIG 98
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------EN 108
+ +++ L+ ++G LY++ EY +L++Y+R+ R G E
Sbjct: 99 KHKNIINLLG---ACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 109 IPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP-- 166
+ + S YQL +G+ + +HRDL N+L+ + +KIAD GLAR
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDY 212
Query: 167 IKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG 216
KK T+ L + + APE L Y+ D+WS + E+ T + +PG
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + K TG A+K D + V TL E IL
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 96
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 97 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFSE----PHAR 145
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 200
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDP 64
L ++G+G++G VY + K A + + +E L E S+++ +
Sbjct: 21 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH- 79
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIP------VNTVKSLM 118
HVVRL+ V +G+ L ++ DLK Y+RS R EN P + + +
Sbjct: 80 HVVRLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 135
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILT 176
++ G+A+ + +HRDL N ++ T+KI D G+ R T +K +L
Sbjct: 136 AEIADGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIYETDYYRKGGKGLLP 194
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ + APE L ++T+ DMWS + E+ +
Sbjct: 195 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITS 226
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALK--KTRLHEDDEGVPPTTLREVSILRMLS 61
D +E + ++G+G +GKVY+A+ K T + A K T+ E+ E + E+ IL
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY----MVEIDILASCD 92
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
P++V+L+D +N + + +D + + R ++ ++ + Q
Sbjct: 93 H-PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTES-------QIQVVCKQT 144
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
+ + H + I+HRDLK N+L +K+AD G++ T I++ I T ++ A
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRTIQRRDSFIGTPYWMA 203
Query: 182 PEVLLGSTH----YSTAVDMWSVACIFAELV 208
PEV++ T Y D+WS+ E+
Sbjct: 204 PEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D ++ ++ +G G +G R+K T ++VA+K E + RE+ R L R
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYI---ERGAAIDENVQREIINHRSL-RH 75
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++VR +V T L ++ EY +L + I + + E+ + QL
Sbjct: 76 PNIVRFKEVILTP-----THLAIIMEYASGGELYERICNAGRFSED----EARFFFQQLL 126
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMT-LKIADLGLARAFTLPIKKYTHEILTLWYRA 181
GV++CH I HRDLK N L+D LKI D G +++ L + + + T Y A
Sbjct: 127 SGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS-TVGTPAYIA 185
Query: 182 PEVLLGSTHYSTAVDMWSVA 201
PEVLL + D+WS
Sbjct: 186 PEVLLRQEYDGKIADVWSCG 205
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + K TG A+K D + V TL E IL
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 116
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 117 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFSE----PHAR 165
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 166 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 220
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 221 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 124/294 (42%), Gaps = 37/294 (12%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
L ++G G YG V + K +G+I+A+K+ R DE L ++ ++ S P++V+
Sbjct: 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIR-STVDEKEQKQLLMDLDVVMRSSDCPYIVQ 85
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGEN-IPVNTVKSLMYQLCKGVAF 127
+EG ++ E M T K+ + ++ IP + + K +
Sbjct: 86 FYG---ALFREGDC--WICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNH 140
Query: 128 CHGH-GILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLL 186
+ I+HRD+KP N+L+DR + +K+ D G++ I K T + Y APE +
Sbjct: 141 LKENLKIIHRDIKPSNILLDR-SGNIKLCDFGISGQLVDSIAK-TRDAGCRPYMAPERID 198
Query: 187 GSTH---YSTAVDMWSVACIFAELVTKTALFPG-DSELQQLLHIFRLLGTPNEKVWPGVS 242
S Y D+WS+ EL T +P +S QL + + G P
Sbjct: 199 PSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK--GDP--------- 247
Query: 243 SLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
PQ + P+ ++ + L D SKR K+ ++HP+
Sbjct: 248 --------PQLSNSEEREFSPSF----INFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + K TG A+K D + V TL E IL
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 96
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 97 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFSE----PHAR 145
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 200
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 124/303 (40%), Gaps = 40/303 (13%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-TLREVSILRMLSRDPHVVR 68
E +GEG Y KV A GK A+K + E G + REV L + +++
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVK---IIEKQAGHSRSRVFREVETLYQCQGNKNILE 75
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAF 127
L++ E T YLVFE + + +I+ + E V+ + L F
Sbjct: 76 LIEFF-----EDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAAL----DF 126
Query: 128 CHGHGILHRDLKPHNLLMD--RKTMTLKIADLGLARAFTL-----PIK--KYTHEILTLW 178
H GI HRDLKP N+L + K +KI D L L PI + T +
Sbjct: 127 LHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAE 186
Query: 179 YRAPEVLL----GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 234
Y APEV+ +T Y D+WS+ + +++ F G +
Sbjct: 187 YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQ 246
Query: 235 EKVWPGVSSLMNWHEYP--QWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME 292
K++ + +E+P W ++ + DL+ ++L D +R+SA + ++
Sbjct: 247 NKLFESIQE--GKYEFPDKDW---------AHISSEAKDLISKLLVRDAKQRLSAAQVLQ 295
Query: 293 HPY 295
HP+
Sbjct: 296 HPW 298
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 28/216 (12%)
Query: 6 FEKLEKVGEGTYGKV----YRAREKATGKIVALKKTRLHEDDEGVPPTT--LREVSILRM 59
+K+ +GEG +GKV Y TG++VA+K + D G + +E+ ILR
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKA---DCGPQHRSGWKQEIDILRT 72
Query: 60 LSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY 119
L + H+++ + Q G L LV EY+ + S R + + L++
Sbjct: 73 LYHE-HIIKYKGCCEDQ---GEKSLQLVMEYVP------LGSLRDYLPRHSIGLAQLLLF 122
Query: 120 --QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKY----THE 173
Q+C+G+A+ H +HR+L N+L+D + +KI D GLA+A + Y +
Sbjct: 123 AQQICEGMAYLHAQHYIHRNLAARNVLLDNDRL-VKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
WY APE L Y A D+WS EL+T
Sbjct: 182 SPVFWY-APECLKEYKFY-YASDVWSFGVTLYELLT 215
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALK--KTRLHEDDEGVPPTTLREVSILRMLS 61
D +E + ++G+G +GKVY+A+ K T + A K T+ E+ E + E+ IL
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY----MVEIDILASCD 92
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
P++V+L+D +N + + +D + + R ++ ++ + Q
Sbjct: 93 H-PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTES-------QIQVVCKQT 144
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
+ + H + I+HRDLK N+L +K+AD G++ T I++ I T ++ A
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRXIQRRDSFIGTPYWMA 203
Query: 182 PEVLLGSTH----YSTAVDMWSVACIFAELV 208
PEV++ T Y D+WS+ E+
Sbjct: 204 PEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 17/223 (7%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTLREVSIL 57
M + F L +G+G++GKV + K T ++ A LKK + +DD+ T+ E +L
Sbjct: 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDD--VECTMVEKRVL 74
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKS 116
+ + P + +L Q ++ LY V EY++ DL +I+ + E V
Sbjct: 75 ALPGKPPFLTQLHSCFQTMDR-----LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAA- 128
Query: 117 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT 176
++ G+ F GI++RDLK N+++D + +KIAD G+ + T
Sbjct: 129 ---EIAIGLFFLQSKGIIYRDLKLDNVMLDSEG-HIKIADFGMCKENIWDGVTTKXFCGT 184
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 219
Y APE+ + Y +VD W+ + E++ A F G+ E
Sbjct: 185 PDYIAPEI-IAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 226
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + K TG A+K D + V TL E IL
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 96
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY ++ ++R + E +
Sbjct: 97 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYAPGGEMFSHLRRIGRFSE----PHAR 145
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NL++D++ +K+ D G A+ +K T +
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKR----VKGRTWXLC 200
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 133/307 (43%), Gaps = 58/307 (18%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR-DP 64
+ L+++G G KV++ + +I A+K L E D + E++ L L +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
++RL D + +Y+V E + DL +++ + +I KS + +
Sbjct: 89 KIIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEA 139
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF---TLPIKKYTHEILTLWYRA 181
V H HGI+H DLKP N L+ LK+ D G+A T + K + ++ T+ Y
Sbjct: 140 VHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDS-QVGTVNYMP 196
Query: 182 PEVL--LGSTHYS--------TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG 231
PE + + S+ + D+WS+ CI + G + QQ+++ L
Sbjct: 197 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY------GKTPFQQIINQISKLH 250
Query: 232 T---PNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAK 288
PN ++ E+P +P +KD D+L+ L+ DP +RIS
Sbjct: 251 AIIDPNHEI-----------EFPD---------IP--EKDLQDVLKCCLKRDPKQRISIP 288
Query: 289 KAMEHPY 295
+ + HPY
Sbjct: 289 ELLAHPY 295
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 122/302 (40%), Gaps = 63/302 (20%)
Query: 2 VMDAFEKLEKV-GEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
++D ++ +V G G GKV + K T + ALK + +D P REV +
Sbjct: 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK---MLQD----CPKARREVELHWRA 67
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
S+ PH+VR++DV + GR L +V E +D + + R + + +M
Sbjct: 68 SQCPHIVRIVDVYENLYA-GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKS 125
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLW 178
+ + + + H I HRD+KP NLL R LK+ D G A+ T
Sbjct: 126 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-------------- 171
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVW 238
Y + DMWS+ I L+ F + L +
Sbjct: 172 ---------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL---------------AIS 207
Query: 239 PGVSSLMNWHEY----PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 294
PG+ + + +Y P+W+ S + L+ +L+ +P++R++ + M HP
Sbjct: 208 PGMKTRIRMGQYEFPNPEWSEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHP 258
Query: 295 YF 296
+
Sbjct: 259 WI 260
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDP 64
L ++G+G++G VY + K A + + +E L E S+++ +
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH- 80
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIP------VNTVKSLM 118
HVVRL+ G +G+ L ++ DLK Y+RS R EN P + + +
Sbjct: 81 HVVRLL----GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILT 176
++ G+A+ + +HRDL N ++ T+KI D G+ R T +K +L
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIYETDYYRKGGKGLLP 195
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ + APE L ++T+ DMWS + E+ +
Sbjct: 196 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + K TG A+K D + V TL E IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEYSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 28/216 (12%)
Query: 6 FEKLEKVGEGTYGKV----YRAREKATGKIVALKKTRLHEDDEGVPPTT--LREVSILRM 59
+K+ +GEG +GKV Y TG++VA+K + D G + +E+ ILR
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKA---DCGPQHRSGWKQEIDILRT 72
Query: 60 LSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY 119
L + H+++ + Q G L LV EY+ + S R + + L++
Sbjct: 73 LYHE-HIIKYKGCCEDQ---GEKSLQLVMEYVP------LGSLRDYLPRHSIGLAQLLLF 122
Query: 120 --QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKY----THE 173
Q+C+G+A+ H +HR+L N+L+D + +KI D GLA+A + Y +
Sbjct: 123 AQQICEGMAYLHSQHYIHRNLAARNVLLDNDRL-VKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
WY APE L Y A D+WS EL+T
Sbjct: 182 SPVFWY-APECLKEYKFY-YASDVWSFGVTLYELLT 215
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALK--KTRLHEDDEGVPPTTLREVSILRMLS 61
D +E + ++G+G +GKVY+A+ K T + A K T+ E+ E + E+ IL
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY----MVEIDILASCD 92
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
P++V+L+D +N + + +D + + R ++ ++ + Q
Sbjct: 93 H-PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTES-------QIQVVCKQT 144
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
+ + H + I+HRDLK N+L +K+AD G++ T I++ I T ++ A
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRXIQRRDXFIGTPYWMA 203
Query: 182 PEVLLGSTH----YSTAVDMWSVACIFAELV 208
PEV++ T Y D+WS+ E+
Sbjct: 204 PEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + K TG A+K D + V TL E IL
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 96
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 97 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFSE----PHAR 145
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 200
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + K TG A+K D + V TL E IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEYSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + K TG A+K D + V TL E IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEYSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 107/227 (47%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE++ +G G++G+V + K TG A+K D + V TL E I
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIQ 96
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY ++ ++R + E +
Sbjct: 97 QAVNF-PFLVKLEFSFKDNSN------LYMVLEYAPGGEMFSHLRRIGRFSE----PHAR 145
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +K+AD G A+ +K T +
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IKVADFGFAKR----VKGRTWXLC 200
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 133/307 (43%), Gaps = 58/307 (18%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR-DP 64
+ L+++G G KV++ + +I A+K L E D + E++ L L +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
++RL D + +Y+V E + DL +++ + +I KS + +
Sbjct: 117 KIIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEA 167
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF---TLPIKKYTHEILTLWYRA 181
V H HGI+H DLKP N L+ LK+ D G+A T + K + ++ T+ Y
Sbjct: 168 VHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDS-QVGTVNYMP 224
Query: 182 PEVL--LGSTHYS--------TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG 231
PE + + S+ + D+WS+ CI + G + QQ+++ L
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY------GKTPFQQIINQISKLH 278
Query: 232 T---PNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAK 288
PN ++ E+P +P +KD D+L+ L+ DP +RIS
Sbjct: 279 AIIDPNHEI-----------EFPD---------IP--EKDLQDVLKCCLKRDPKQRISIP 316
Query: 289 KAMEHPY 295
+ + HPY
Sbjct: 317 ELLAHPY 323
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 16/223 (7%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
M + ++ ++ +G G +G+V R KA+ K+ A+K E + E +
Sbjct: 72 MKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 131
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMY 119
+ P VV+L Q LY+V EYM DL + ++ ++P K
Sbjct: 132 ANSPWVVQLFCAFQDDK-----YLYMVMEYMPGGDLVNLMSNY-----DVPEKWAKFYTA 181
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLA-RAFTLPIKKYTHEILTLW 178
++ + H G++HRD+KP N+L+D K LK+AD G + + + T
Sbjct: 182 EVVLALDAIHSMGLIHRDVKPDNMLLD-KHGHLKLADFGTCMKMDETGMVHCDTAVGTPD 240
Query: 179 YRAPEVLL---GSTHYSTAVDMWSVACIFAELVTKTALFPGDS 218
Y +PEVL G +Y D WSV E++ F DS
Sbjct: 241 YISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS 283
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 31/228 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVAL------KKTRLHEDDEGVPPTTLREVSI 56
+D FE+++ +G G++G+V + TG A+ K +L E + TL E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEH-----TLNEKRI 94
Query: 57 LRMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTV 114
L+ ++ P +V+L K N LY+V EY ++ ++R + E
Sbjct: 95 LQAVNF-PFLVKLEFSFKDNSN------LYMVMEYAPGGEMFSHLRRIGRFSE----PHA 143
Query: 115 KSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI 174
+ Q+ + H +++RDLKP NL++D++ +K+ D GLA+ +K T +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGLAKR----VKGRTWXL 198
Query: 175 L-TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 133/307 (43%), Gaps = 58/307 (18%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR-DP 64
+ L+++G G KV++ + +I A+K L E D + E++ L L +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
++RL D + +Y+V E + DL +++ + +I KS + +
Sbjct: 117 KIIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEA 167
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF---TLPIKKYTHEILTLWYRA 181
V H HGI+H DLKP N L+ LK+ D G+A T + K + ++ T+ Y
Sbjct: 168 VHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDS-QVGTVNYMP 224
Query: 182 PEVL--LGSTHYS--------TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG 231
PE + + S+ + D+WS+ CI + G + QQ+++ L
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY------GKTPFQQIINQISKLH 278
Query: 232 T---PNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAK 288
PN ++ E+P +P +KD D+L+ L+ DP +RIS
Sbjct: 279 AIIDPNHEI-----------EFPD---------IP--EKDLQDVLKCCLKRDPKQRISIP 316
Query: 289 KAMEHPY 295
+ + HPY
Sbjct: 317 ELLAHPY 323
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 133/307 (43%), Gaps = 58/307 (18%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR-DP 64
+ L+++G G KV++ + +I A+K L E D + E++ L L +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
++RL D + +Y+V E + DL +++ + +I KS + +
Sbjct: 73 KIIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEA 123
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF---TLPIKKYTHEILTLWYRA 181
V H HGI+H DLKP N L+ LK+ D G+A T + K + ++ T+ Y
Sbjct: 124 VHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDS-QVGTVNYMP 180
Query: 182 PEVL--LGSTHYS--------TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG 231
PE + + S+ + D+WS+ CI + G + QQ+++ L
Sbjct: 181 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY------GKTPFQQIINQISKLH 234
Query: 232 T---PNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAK 288
PN ++ E+P +P +KD D+L+ L+ DP +RIS
Sbjct: 235 AIIDPNHEI-----------EFPD---------IP--EKDLQDVLKCCLKRDPKQRISIP 272
Query: 289 KAMEHPY 295
+ + HPY
Sbjct: 273 ELLAHPY 279
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + K TG A+K D + V TL E IL
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 88
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 89 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFXE----PHAR 137
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 138 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 192
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 193 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 238
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 133/307 (43%), Gaps = 58/307 (18%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR-DP 64
+ L+++G G KV++ + +I A+K L E D + E++ L L +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
++RL D + +Y+V E + DL +++ + +I KS + +
Sbjct: 70 KIIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEA 120
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF---TLPIKKYTHEILTLWYRA 181
V H HGI+H DLKP N L+ LK+ D G+A T + K + ++ T+ Y
Sbjct: 121 VHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDS-QVGTVNYMP 177
Query: 182 PEVL--LGSTHYS--------TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG 231
PE + + S+ + D+WS+ CI + G + QQ+++ L
Sbjct: 178 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY------GKTPFQQIINQISKLH 231
Query: 232 T---PNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAK 288
PN ++ E+P +P +KD D+L+ L+ DP +RIS
Sbjct: 232 AIIDPNHEI-----------EFPD---------IP--EKDLQDVLKCCLKRDPKQRISIP 269
Query: 289 KAMEHPY 295
+ + HPY
Sbjct: 270 ELLAHPY 276
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 29/227 (12%)
Query: 12 VGEGTYGKVYRAR----EKATGKIVALKKTRLHEDD--EGVPPTTLREVSILRMLSRDPH 65
+GEG +G+V A +K K ++ +DD E + E+ +++M+ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVN 112
++ L+ ++G LY++ EY +L++Y+R+ R G E +
Sbjct: 103 IINLLG---ACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 113 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTL--PIKKY 170
+ S YQL +G+ + +HRDL N+L+ + +KIAD GLAR KK
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDXXKKT 216
Query: 171 THEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG 216
T+ L + + APE L Y+ D+WS + E+ T + +PG
Sbjct: 217 TNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 29/227 (12%)
Query: 12 VGEGTYGKVYRAR----EKATGKIVALKKTRLHEDD--EGVPPTTLREVSILRMLSRDPH 65
+GEG +G+V A +K K ++ +DD E + E+ +++M+ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVN 112
++ L+ ++G LY++ EY +L++Y+R+ R G E +
Sbjct: 103 IINLLG---ACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 113 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTL--PIKKY 170
+ S YQL +G+ + +HRDL N+L+ + +KIAD GLAR KK
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDXXKKT 216
Query: 171 THEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG 216
T+ L + + APE L Y+ D+WS + E+ T + +PG
Sbjct: 217 TNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 133/307 (43%), Gaps = 58/307 (18%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR-DP 64
+ L+++G G KV++ + +I A+K L E D + E++ L L +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
++RL D + +Y+V E + DL +++ + +I KS + +
Sbjct: 69 KIIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEA 119
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF---TLPIKKYTHEILTLWYRA 181
V H HGI+H DLKP N L+ LK+ D G+A T + K + ++ T+ Y
Sbjct: 120 VHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDS-QVGTVNYMP 176
Query: 182 PEVL--LGSTHYS--------TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG 231
PE + + S+ + D+WS+ CI + G + QQ+++ L
Sbjct: 177 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY------GKTPFQQIINQISKLH 230
Query: 232 T---PNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAK 288
PN ++ E+P +P +KD D+L+ L+ DP +RIS
Sbjct: 231 AIIDPNHEI-----------EFPD---------IP--EKDLQDVLKCCLKRDPKQRISIP 268
Query: 289 KAMEHPY 295
+ + HPY
Sbjct: 269 ELLAHPY 275
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDPHV 66
++G+G++G VY K K + + +E L E S+++ + HV
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HV 75
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL--- 121
VRL+ G +G+ L ++ DLK Y+RS R EN PV SL M Q+
Sbjct: 76 VRLL----GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 131
Query: 122 -CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLW 178
G+A+ + + +HRDL N ++ + T+KI D G+ R T +K +L +
Sbjct: 132 IADGMAYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 190
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ +PE L ++T D+WS + E+ T
Sbjct: 191 WMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 220
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDPHV 66
++G+G++G VY K K + + +E L E S+++ + HV
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HV 84
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL--- 121
VRL+ G +G+ L ++ DLK Y+RS R EN PV SL M Q+
Sbjct: 85 VRLL----GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 140
Query: 122 -CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLW 178
G+A+ + + +HRDL N ++ + T+KI D G+ R T +K +L +
Sbjct: 141 IADGMAYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 199
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ +PE L ++T D+WS + E+ T
Sbjct: 200 WMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 229
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 17/223 (7%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTLREVSIL 57
M + F L +G+G++GKV + K T ++ A LKK + +DD+ T+ E +L
Sbjct: 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDD--VECTMVEKRVL 395
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKS 116
+ + P + +L Q ++ LY V EY++ DL +I+ + E V
Sbjct: 396 ALPGKPPFLTQLHSCFQTMDR-----LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAA- 449
Query: 117 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT 176
++ G+ F GI++RDLK N+++D + +KIAD G+ + T
Sbjct: 450 ---EIAIGLFFLQSKGIIYRDLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFCGT 505
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 219
Y APE+ + Y +VD W+ + E++ A F G+ E
Sbjct: 506 PDYIAPEI-IAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 547
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDPHV 66
++G+G++G VY K K + + +E L E S+++ + HV
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HV 90
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL--- 121
VRL+ G +G+ L ++ DLK Y+RS R EN PV SL M Q+
Sbjct: 91 VRLL----GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 146
Query: 122 -CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLW 178
G+A+ + + +HRDL N ++ + T+KI D G+ R T +K +L +
Sbjct: 147 IADGMAYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ +PE L ++T D+WS + E+ T
Sbjct: 206 WMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 31/228 (13%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVAL------KKTRLHEDDEGVPPTTLREVSI 56
+D FE+++ +G G++G+V + TG A+ K +L E + TL E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEH-----TLNEKRI 94
Query: 57 LRMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTV 114
L+ ++ P +V+L K N LY+V EY ++ ++R + E
Sbjct: 95 LQAVNF-PFLVKLEFSFKDNSN------LYMVMEYAPGGEMFSHLRRIGRFSE----PHA 143
Query: 115 KSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI 174
+ Q+ + H +++RDLKP NL++D++ +++ D GLA+ +K T +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IQVTDFGLAKR----VKGRTWXL 198
Query: 175 L-TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 129/306 (42%), Gaps = 56/306 (18%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR-DP 64
+ L+++G G KV++ + +I A+K L E D + E++ L L +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
++RL D + +Y+V E + DL +++ + +I KS + +
Sbjct: 89 KIIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEA 139
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT--HEILTLWYRAP 182
V H HGI+H DLKP N L+ LK+ D G+A ++ T+ Y P
Sbjct: 140 VHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPP 197
Query: 183 EVL--LGSTHYS--------TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT 232
E + + S+ + D+WS+ CI + G + QQ+++ L
Sbjct: 198 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY------GKTPFQQIINQISKLHA 251
Query: 233 ---PNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKK 289
PN ++ E+P +P +KD D+L+ L+ DP +RIS +
Sbjct: 252 IIDPNHEI-----------EFPD---------IP--EKDLQDVLKCCLKRDPKQRISIPE 289
Query: 290 AMEHPY 295
+ HPY
Sbjct: 290 LLAHPY 295
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 55/307 (17%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTR---LHEDDEGVPPTTLREVSIL 57
+ M+ F+ L+ +G+GT+GKV REKATG+ A+K R + DE T+ E +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVL 59
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ +R P + L Q ++ L V EY + F ++
Sbjct: 60 QN-TRHPFLTALKYAFQTHDR-----LCFVMEYANGG-----ELFFHLSRERVFTEERAR 108
Query: 118 MY--QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Y ++ + + H +++RD+K NL++D K +KI D GL +
Sbjct: 109 FYGAEIVSALEYLHSRDVVYRDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKXFCG 167
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPN 234
T Y APEV L Y AVD W + + E++ + + D E +F L+
Sbjct: 168 TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFELI---- 217
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKK 289
LM +P+ L + LL +L+ DP +R+ AK+
Sbjct: 218 ---------LMEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKE 257
Query: 290 AMEHPYF 296
MEH +F
Sbjct: 258 VMEHRFF 264
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 55/307 (17%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTR---LHEDDEGVPPTTLREVSIL 57
+ M+ F+ L+ +G+GT+GKV REKATG+ A+K R + DE T+ E +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVL 59
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ +R P + L Q ++ L V EY + F ++
Sbjct: 60 QN-TRHPFLTALKYAFQTHDR-----LCFVMEYANGG-----ELFFHLSRERVFTEERAR 108
Query: 118 MY--QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Y ++ + + H +++RD+K NL++D K +KI D GL +
Sbjct: 109 FYGAEIVSALEYLHSRDVVYRDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKXFCG 167
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPN 234
T Y APEV L Y AVD W + + E++ + + D E +F L+
Sbjct: 168 TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFELI---- 217
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKK 289
LM +P+ L + LL +L+ DP +R+ AK+
Sbjct: 218 ---------LMEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKE 257
Query: 290 AMEHPYF 296
MEH +F
Sbjct: 258 VMEHRFF 264
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 55/307 (17%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTR---LHEDDEGVPPTTLREVSIL 57
+ M+ F+ L+ +G+GT+GKV REKATG+ A+K R + DE T+ E +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVL 59
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ +R P + L Q ++ L V EY + F ++
Sbjct: 60 QN-TRHPFLTALKYAFQTHDR-----LCFVMEYANGG-----ELFFHLSRERVFTEERAR 108
Query: 118 MY--QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Y ++ + + H +++RD+K NL++D K +KI D GL +
Sbjct: 109 FYGAEIVSALEYLHSRDVVYRDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKXFCG 167
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPN 234
T Y APEV L Y AVD W + + E++ + + D E +F L+
Sbjct: 168 TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFELI---- 217
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKK 289
LM +P+ L + LL +L+ DP +R+ AK+
Sbjct: 218 ---------LMEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKE 257
Query: 290 AMEHPYF 296
MEH +F
Sbjct: 258 VMEHRFF 264
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 115/236 (48%), Gaps = 29/236 (12%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIV--ALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
+E++G G +G+V+ K+ +LK+ + P L E ++++ L +
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS------PDAFLAEANLMKQLQHQ-RL 80
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
VRL V + +Y++ EYM+ L ++++ +G + +N + + Q+ +G+
Sbjct: 81 VRLYAVVTQEP------IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 132
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAP 182
AF +HRDL+ N+L+ T++ KIAD GLAR + +YT + + AP
Sbjct: 133 AFIEERNYIHRDLRAANILVS-DTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAP 189
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLLGTPN 234
E + T ++ D+WS + E+VT + +PG + +Q L +R++ N
Sbjct: 190 EAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 244
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDP 64
L ++G+G++G VY + K A + + +E L E S+++ +
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH- 80
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIP------VNTVKSLM 118
HVVRL+ G +G+ L ++ DLK Y+RS R EN P + + +
Sbjct: 81 HVVRLL----GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILT 176
++ G+A+ + +HR+L N ++ T+KI D G+ R T +K +L
Sbjct: 137 AEIADGMAYLNAKKFVHRNLAARNCMVAHD-FTVKIGDFGMTRDIYETDYYRKGGKGLLP 195
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ + APE L ++T+ DMWS + E+ +
Sbjct: 196 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 115/236 (48%), Gaps = 29/236 (12%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIV--ALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
+E++G G +G+V+ K+ +LK+ + P L E ++++ L +
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS------PDAFLAEANLMKQLQHQ-RL 76
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
VRL V + +Y++ EYM+ L ++++ +G + +N + + Q+ +G+
Sbjct: 77 VRLYAVVTQEP------IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 128
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAP 182
AF +HRDL+ N+L+ T++ KIAD GLAR + +YT + + AP
Sbjct: 129 AFIEERNYIHRDLRAANILVS-DTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAP 185
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLLGTPN 234
E + T ++ D+WS + E+VT + +PG + +Q L +R++ N
Sbjct: 186 EAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 240
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 115/236 (48%), Gaps = 29/236 (12%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIV--ALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
+E++G G +G+V+ K+ +LK+ + P L E ++++ L +
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS------PDAFLAEANLMKQLQHQ-RL 70
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
VRL V + +Y++ EYM+ L ++++ +G + +N + + Q+ +G+
Sbjct: 71 VRLYAVVTQEP------IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 122
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAP 182
AF +HRDL+ N+L+ T++ KIAD GLAR + +YT + + AP
Sbjct: 123 AFIEERNYIHRDLRAANILVS-DTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAP 179
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLLGTPN 234
E + T ++ D+WS + E+VT + +PG + +Q L +R++ N
Sbjct: 180 EAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 115/236 (48%), Gaps = 29/236 (12%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIV--ALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
+E++G G +G+V+ K+ +LK+ + P L E ++++ L +
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS------PDAFLAEANLMKQLQHQ-RL 75
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
VRL V + +Y++ EYM+ L ++++ +G + +N + + Q+ +G+
Sbjct: 76 VRLYAVVTQEP------IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 127
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAP 182
AF +HRDL+ N+L+ T++ KIAD GLAR + +YT + + AP
Sbjct: 128 AFIEERNYIHRDLRAANILVS-DTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAP 184
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLLGTPN 234
E + T ++ D+WS + E+VT + +PG + +Q L +R++ N
Sbjct: 185 EAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 239
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 111/228 (48%), Gaps = 22/228 (9%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D FE++ ++G G G V + + + +G I+A K L E + +RE+ +L +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHL-EIKPAIRNQIIRELQVLHECN-S 73
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V + + + E+MD L + ++ ++ IP + + +
Sbjct: 74 PYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKEAKR----IPEEILGKVSIAVL 124
Query: 123 KGVAFC-HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYR 180
+G+A+ H I+HRD+KP N+L++ + +K+ D G++ I + + T Y
Sbjct: 125 RGLAYLREKHQIMHRDVKPSNILVNSRG-EIKLCDFGVSGQL---IDSMANSFVGTRSYM 180
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAEL-VTKTALFPGDSELQQLLHIF 227
APE L G THYS D+WS+ EL V + + P D+ ++L IF
Sbjct: 181 APERLQG-THYSVQSDIWSMGLSLVELAVGRYPIPPPDA--KELEAIF 225
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDP 64
L ++G+G++G VY + K A + + +E L E S+++ +
Sbjct: 23 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH- 81
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIP------VNTVKSLM 118
HVVRL+ V +G+ L ++ DLK Y+RS R EN P + + +
Sbjct: 82 HVVRLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 137
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILT 176
++ G+A+ + +HR+L N ++ T+KI D G+ R T +K +L
Sbjct: 138 AEIADGMAYLNAKKFVHRNLAARNCMVAHD-FTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ + APE L ++T+ DMWS + E+ +
Sbjct: 197 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITS 228
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 29/227 (12%)
Query: 12 VGEGTYGKVYRAR----EKATGKIVALKKTRLHEDD--EGVPPTTLREVSILRMLSRDPH 65
+GEG +G+V A +K K ++ +DD E + E+ +++M+ + +
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVN 112
++ L+ ++G LY++ EY +L++Y+R+ R G E +
Sbjct: 92 IINLLG---ACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 113 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKY 170
+ S YQL +G+ + +HRDL N+L+ + +KIAD GLAR KK
Sbjct: 147 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDYYKKT 205
Query: 171 THEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG 216
T+ L + + APE L Y+ D+WS + E+ T + +PG
Sbjct: 206 TNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 251
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDPHV 66
++G+G++G VY K K + + +E L E S+++ + HV
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HV 83
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL--- 121
VRL+ G +G+ L ++ DLK Y+RS R EN PV SL M Q+
Sbjct: 84 VRLL----GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 122 -CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLW 178
G+A+ + + +HRDL N ++ + T+KI D G+ R T +K +L +
Sbjct: 140 IADGMAYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ +PE L ++T D+WS + E+ T
Sbjct: 199 WMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 228
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 55/307 (17%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTR---LHEDDEGVPPTTLREVSIL 57
+ M+ F+ L+ +G+GT+GKV REKATG+ A+K R + DE T+ E +L
Sbjct: 7 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVL 64
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ +R P + L Q ++ L V EY + F ++
Sbjct: 65 QN-TRHPFLTALKYAFQTHDR-----LCFVMEYANGG-----ELFFHLSRERVFTEERAR 113
Query: 118 MY--QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Y ++ + + H +++RD+K NL++D K +KI D GL +
Sbjct: 114 FYGAEIVSALEYLHSRDVVYRDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKXFCG 172
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPN 234
T Y APEV L Y AVD W + + E++ + + D E +F L+
Sbjct: 173 TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFELI---- 222
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKK 289
LM +P+ L + LL +L+ DP +R+ AK+
Sbjct: 223 ---------LMEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKE 262
Query: 290 AMEHPYF 296
MEH +F
Sbjct: 263 VMEHRFF 269
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 28/268 (10%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGK-------IVALKKTRLHEDDEGVPPTTLREVSILR 58
FE L+ +G+G++GKV+ + K +G + LKK L D T E IL
Sbjct: 27 FELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRDR---VRTKMERDILV 82
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSL 117
++ P +V+L Q + K LYL+ +++ DL + R ++ VK
Sbjct: 83 EVNH-PFIVKLHYAFQTEGK-----LYLILDFLRGGDL--FTRLSKEV--MFTEEDVKFY 132
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 177
+ +L + H GI++RDLKP N+L+D + +K+ D GL++ KK T+
Sbjct: 133 LAELALALDHLHSLGIIYRDLKPENILLDEEG-HIKLTDFGLSKESIDHEKKAYSFCGTV 191
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL-LGTPNEK 236
Y APEV+ H +A D WS + E++T T F G + + I + LG P +
Sbjct: 192 EYMAPEVVNRRGHTQSA-DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP-QF 249
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPN 264
+ P SL+ + NP + A P+
Sbjct: 250 LSPEAQSLLRM--LFKRNPANRLGAGPD 275
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 126/259 (48%), Gaps = 33/259 (12%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIV--ALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
+E++G G +G+V+ K+ +LK+ + P L E ++++ L +
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS------PDAFLAEANLMKQLQHQ-RL 65
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
VRL V + +Y++ EYM+ L ++++ +G + +N + + Q+ +G+
Sbjct: 66 VRLYAVVTQEP------IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 117
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAP 182
AF +HRDL+ N+L+ T++ KIAD GLAR + +YT + + AP
Sbjct: 118 AFIEERNYIHRDLRAANILVS-DTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAP 174
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLLGTPN--EK 236
E + T ++ D+WS + E+VT + +PG + +Q L +R++ N E+
Sbjct: 175 EAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE 233
Query: 237 VWPGVSSLMNWHEYPQWNP 255
++ + + W E P+ P
Sbjct: 234 LYQLMR--LCWKERPEDRP 250
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 55/307 (17%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTR---LHEDDEGVPPTTLREVSIL 57
+ M+ F+ L+ +G+GT+GKV REKATG+ A+K R + DE T+ E +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVL 59
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ +R P + L Q ++ L V EY + F ++
Sbjct: 60 QN-TRHPFLTALKYAFQTHDR-----LCFVMEYANGG-----ELFFHLSRERVFTEERAR 108
Query: 118 MY--QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Y ++ + + H +++RD+K NL++D K +KI D GL +
Sbjct: 109 FYGAEIVSALEYLHSRDVVYRDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKTFCG 167
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPN 234
T Y APEV L Y AVD W + + E++ + + D E +F L+
Sbjct: 168 TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFELI---- 217
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKK 289
LM +P+ L + LL +L+ DP +R+ AK+
Sbjct: 218 ---------LMEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKE 257
Query: 290 AMEHPYF 296
MEH +F
Sbjct: 258 VMEHRFF 264
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 29/227 (12%)
Query: 12 VGEGTYGKVYRAR----EKATGKIVALKKTRLHEDD--EGVPPTTLREVSILRMLSRDPH 65
+GEG +G+V A +K K ++ +DD E + E+ +++M+ + +
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVN 112
++ L+ ++G LY++ EY +L++Y+R+ R G E +
Sbjct: 95 IINLLG---ACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 113 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKY 170
+ S YQL +G+ + +HRDL N+L+ + +KIAD GLAR KK
Sbjct: 150 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDYYKKT 208
Query: 171 THEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG 216
T+ L + + APE L Y+ D+WS + E+ T + +PG
Sbjct: 209 TNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 254
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 55/307 (17%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTR---LHEDDEGVPPTTLREVSIL 57
+ M+ F+ L+ +G+GT+GKV REKATG+ A+K R + DE T+ E +L
Sbjct: 5 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVL 62
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ +R P + L Q ++ L V EY + F ++
Sbjct: 63 QN-TRHPFLTALKYAFQTHDR-----LCFVMEYANGG-----ELFFHLSRERVFTEERAR 111
Query: 118 MY--QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Y ++ + + H +++RD+K NL++D K +KI D GL +
Sbjct: 112 FYGAEIVSALEYLHSRDVVYRDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKTFCG 170
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPN 234
T Y APEV L Y AVD W + + E++ + + D E +F L+
Sbjct: 171 TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFELI---- 220
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKK 289
LM +P+ L + LL +L+ DP +R+ AK+
Sbjct: 221 ---------LMEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKE 260
Query: 290 AMEHPYF 296
MEH +F
Sbjct: 261 VMEHRFF 267
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDPHV 66
++G+G++G VY K K + + +E L E S+++ + HV
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HV 77
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL--- 121
VRL+ V +G+ L ++ DLK Y+RS R EN PV SL M Q+
Sbjct: 78 VRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 122 -CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLW 178
G+A+ + + +HRDL N ++ + T+KI D G+ R T +K +L +
Sbjct: 134 IADGMAYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ +PE L ++T D+WS + E+ T
Sbjct: 193 WMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 222
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 37/231 (16%)
Query: 12 VGEGTYGKVYRA----------REKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
+GEG +G+V A +E T + LK +D + + E+ +++M+
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL----VSEMEMMKMIG 144
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------EN 108
+ +++ L+ ++G LY++ EY +L++Y+R+ R G E
Sbjct: 145 KHKNIINLLG---ACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 109 IPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP-- 166
+ + S YQL +G+ + +HRDL N+L+ + +KIAD GLAR
Sbjct: 200 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDY 258
Query: 167 IKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG 216
KK T+ L + + APE L Y+ D+WS + E+ T + +PG
Sbjct: 259 YKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 308
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDPHV 66
++G+G++G VY K K + + +E L E S+++ + HV
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HV 81
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL--- 121
VRL+ G +G+ L ++ DLK Y+RS R EN PV SL M Q+
Sbjct: 82 VRLL----GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 137
Query: 122 -CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLW 178
G+A+ + + +HRDL N ++ + T+KI D G+ R T +K +L +
Sbjct: 138 IADGMAYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ +PE L ++T D+WS + E+ T
Sbjct: 197 WMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 226
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 29/227 (12%)
Query: 12 VGEGTYGKVYRAR----EKATGKIVALKKTRLHEDD--EGVPPTTLREVSILRMLSRDPH 65
+GEG +G+V A +K K ++ +DD E + E+ +++M+ + +
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVN 112
++ L+ ++G LY++ EY +L++Y+R+ R G E +
Sbjct: 90 IINLLG---ACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 113 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKY 170
+ S YQL +G+ + +HRDL N+L+ + +KIAD GLAR KK
Sbjct: 145 DLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNV-MKIADFGLARDINNIDYYKKT 203
Query: 171 THEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG 216
T+ L + + APE L Y+ D+WS + E+ T + +PG
Sbjct: 204 TNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 249
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 55/307 (17%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTR---LHEDDEGVPPTTLREVSIL 57
+ M+ F+ L+ +G+GT+GKV REKATG+ A+K R + DE T+ E +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVL 59
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL 117
+ +R P + L Q ++ L V EY + F ++
Sbjct: 60 QN-TRHPFLTALKYAFQTHDR-----LCFVMEYANGG-----ELFFHLSRERVFTEERAR 108
Query: 118 MY--QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Y ++ + + H +++RD+K NL++D K +KI D GL +
Sbjct: 109 FYGAEIVSALEYLHSRDVVYRDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKTFCG 167
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPN 234
T Y APEV L Y AVD W + + E++ + + D E +F L+
Sbjct: 168 TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFELI---- 217
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKK 289
LM +P+ L + LL +L+ DP +R+ AK+
Sbjct: 218 ---------LMEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKE 257
Query: 290 AMEHPYF 296
MEH +F
Sbjct: 258 VMEHRFF 264
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDPHV 66
++G+G++G VY K K + + +E L E S+++ + HV
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HV 84
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL--- 121
VRL+ G +G+ L ++ DLK Y+RS R EN PV SL M Q+
Sbjct: 85 VRLL----GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 140
Query: 122 -CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLW 178
G+A+ + + +HRDL N ++ + T+KI D G+ R T +K +L +
Sbjct: 141 IADGMAYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 199
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ +PE L ++T D+WS + E+ T
Sbjct: 200 WMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 229
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 29/227 (12%)
Query: 12 VGEGTYGKVYRAR----EKATGKIVALKKTRLHEDD--EGVPPTTLREVSILRMLSRDPH 65
+GEG +G+V A +K K ++ +DD E + E+ +++M+ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVN 112
++ L+ ++G LY++ EY +L++Y+R+ R G E +
Sbjct: 103 IIHLLG---ACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 113 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKY 170
+ S YQL +G+ + +HRDL N+L+ + +KIAD GLAR KK
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDYYKKT 216
Query: 171 THEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG 216
T+ L + + APE L Y+ D+WS + E+ T + +PG
Sbjct: 217 TNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDPHV 66
++G+G++G VY K K + + +E L E S+++ + HV
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HV 83
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL--- 121
VRL+ G +G+ L ++ DLK Y+RS R EN PV SL M Q+
Sbjct: 84 VRLL----GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 122 -CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLW 178
G+A+ + + +HRDL N ++ + T+KI D G+ R T +K +L +
Sbjct: 140 IADGMAYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ +PE L ++T D+WS + E+ T
Sbjct: 199 WMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 228
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 35/220 (15%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALK----------KTRLHEDDEGVPPTTLREVS 55
F+ L +G G++G+V+ R + G+ A+K K H +DE + + +
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 56 ILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVK 115
I+RM D +Q ++++ +Y++ + S + + P K
Sbjct: 68 IIRMWGT------FQDAQQ---------IFMIMDYIEGGE---LFSLLRKSQRFPNPVAK 109
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
++C + + H I++RDLKP N+L+D K +KI D G A+ + T+ +
Sbjct: 110 FYAAEVCLALEYLHSKDIIYRDLKPENILLD-KNGHIKITDFGFAKY----VPDVTYXLC 164
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALF 214
T Y APEV + + Y+ ++D WS + E++ F
Sbjct: 165 GTPDYIAPEV-VSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 28/268 (10%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGK-------IVALKKTRLHEDDEGVPPTTLREVSILR 58
FE L+ +G+G++GKV+ + K +G + LKK L D T E IL
Sbjct: 26 FELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRDR---VRTKMERDILV 81
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSL 117
++ P +V+L Q + K LYL+ +++ DL + R ++ VK
Sbjct: 82 EVNH-PFIVKLHYAFQTEGK-----LYLILDFLRGGDL--FTRLSKEV--MFTEEDVKFY 131
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 177
+ +L + H GI++RDLKP N+L+D + +K+ D GL++ KK T+
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEG-HIKLTDFGLSKESIDHEKKAYSFCGTV 190
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL-LGTPNEK 236
Y APEV+ H +A D WS + E++T T F G + + I + LG P +
Sbjct: 191 EYMAPEVVNRRGHTQSA-DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP-QF 248
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPN 264
+ P SL+ + NP + A P+
Sbjct: 249 LSPEAQSLLRM--LFKRNPANRLGAGPD 274
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 28/268 (10%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGK-------IVALKKTRLHEDDEGVPPTTLREVSILR 58
FE L+ +G+G++GKV+ + K +G + LKK L D T E IL
Sbjct: 26 FELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRDR---VRTKMERDILV 81
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSL 117
++ P +V+L Q + K LYL+ +++ DL + R ++ VK
Sbjct: 82 EVNH-PFIVKLHYAFQTEGK-----LYLILDFLRGGDL--FTRLSKEV--MFTEEDVKFY 131
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 177
+ +L + H GI++RDLKP N+L+D + +K+ D GL++ KK T+
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEG-HIKLTDFGLSKESIDHEKKAYSFCGTV 190
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL-LGTPNEK 236
Y APEV+ H +A D WS + E++T T F G + + I + LG P +
Sbjct: 191 EYMAPEVVNRRGHTQSA-DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP-QF 248
Query: 237 VWPGVSSLMNWHEYPQWNPQSLATAVPN 264
+ P SL+ + NP + A P+
Sbjct: 249 LSPEAQSLLRM--LFKRNPANRLGAGPD 274
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 113/244 (46%), Gaps = 45/244 (18%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIV--ALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
+E++G G +G+V+ K+ +LK+ + P L E ++++ L +
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS------PDAFLAEANLMKQLQHQ-RL 78
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
VRL V + +Y++ EYM+ L ++++ +G + +N + + Q+ +G+
Sbjct: 79 VRLYAVVTQEP------IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 130
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEI 174
AF +HRDL+ N+L+ T++ KIAD GLAR PIK
Sbjct: 131 AFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIK------ 183
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLL 230
+ APE + T ++ D+WS + E+VT + +PG + +Q L +R++
Sbjct: 184 ----WTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 238
Query: 231 GTPN 234
N
Sbjct: 239 RPDN 242
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 113/244 (46%), Gaps = 45/244 (18%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIV--ALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
+E++G G +G+V+ K+ +LK+ + P L E ++++ L +
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS------PDAFLAEANLMKQLQHQ-RL 71
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
VRL V + +Y++ EYM+ L ++++ +G + +N + + Q+ +G+
Sbjct: 72 VRLYAVVTQEP------IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 123
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEI 174
AF +HRDL+ N+L+ T++ KIAD GLAR PIK
Sbjct: 124 AFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIK------ 176
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLL 230
+ APE + T ++ D+WS + E+VT + +PG + +Q L +R++
Sbjct: 177 ----WTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 231
Query: 231 GTPN 234
N
Sbjct: 232 RPDN 235
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 132/307 (42%), Gaps = 58/307 (18%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR-DP 64
+ L+++G G KV++ + +I A+K L E D + E++ L L +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
++RL D + +Y+V E + DL +++ + +I KS + +
Sbjct: 117 KIIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEA 167
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF---TLPIKKYTHEILTLWYRA 181
V H HGI+H DLKP N L+ LK+ D G+A T + K + ++ + Y
Sbjct: 168 VHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDS-QVGAVNYMP 224
Query: 182 PEVL--LGSTHYS--------TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG 231
PE + + S+ + D+WS+ CI + G + QQ+++ L
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY------GKTPFQQIINQISKLH 278
Query: 232 T---PNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAK 288
PN ++ E+P +P +KD D+L+ L+ DP +RIS
Sbjct: 279 AIIDPNHEI-----------EFPD---------IP--EKDLQDVLKCCLKRDPKQRISIP 316
Query: 289 KAMEHPY 295
+ + HPY
Sbjct: 317 ELLAHPY 323
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 113/244 (46%), Gaps = 45/244 (18%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIV--ALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
+E++G G +G+V+ K+ +LK+ + P L E ++++ L +
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS------PDAFLAEANLMKQLQHQ-RL 72
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
VRL V + +Y++ EYM+ L ++++ +G + +N + + Q+ +G+
Sbjct: 73 VRLYAVVTQEP------IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 124
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEI 174
AF +HRDL+ N+L+ T++ KIAD GLAR PIK
Sbjct: 125 AFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIK------ 177
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLL 230
+ APE + T ++ D+WS + E+VT + +PG + +Q L +R++
Sbjct: 178 ----WTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 232
Query: 231 GTPN 234
N
Sbjct: 233 RPDN 236
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 113/244 (46%), Gaps = 45/244 (18%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIV--ALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
+E++G G +G+V+ K+ +LK+ + P L E ++++ L +
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS------PDAFLAEANLMKQLQHQ-RL 70
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
VRL V + +Y++ EYM+ L ++++ +G + +N + + Q+ +G+
Sbjct: 71 VRLYAVVTQEP------IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 122
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEI 174
AF +HRDL+ N+L+ T++ KIAD GLAR PIK
Sbjct: 123 AFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIK------ 175
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLL 230
+ APE + T ++ D+WS + E+VT + +PG + +Q L +R++
Sbjct: 176 ----WTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 230
Query: 231 GTPN 234
N
Sbjct: 231 RPDN 234
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 18/205 (8%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL 69
EK+G G++G V+RA + G VA+K + LREV+I++ L R P++V
Sbjct: 43 EKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLF 99
Query: 70 MD-VKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTG--ENIPVNTVKSLMYQLCKGVA 126
M V Q N L +V EY+ R ++G E + S+ Y + KG+
Sbjct: 100 MGAVTQPPN------LSIVTEYLSRG--SLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 127 FCHGHG--ILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
+ H I+HRDLK NLL+D+K T+K+ D GL+R T + APEV
Sbjct: 152 YLHNRNPPIVHRDLKSPNLLVDKK-YTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEV 210
Query: 185 LLGSTHYSTAVDMWSVACIFAELVT 209
L + D++S I EL T
Sbjct: 211 LRDEPSNEKS-DVYSFGVILWELAT 234
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 113/244 (46%), Gaps = 45/244 (18%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIV--ALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
+E++G G +G+V+ K+ +LK+ + P L E ++++ L +
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS------PDAFLAEANLMKQLQHQ-RL 76
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
VRL V + +Y++ EYM+ L ++++ +G + +N + + Q+ +G+
Sbjct: 77 VRLYAVVTQEP------IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 128
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEI 174
AF +HRDL+ N+L+ T++ KIAD GLAR PIK
Sbjct: 129 AFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIK------ 181
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLL 230
+ APE + T ++ D+WS + E+VT + +PG + +Q L +R++
Sbjct: 182 ----WTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 236
Query: 231 GTPN 234
N
Sbjct: 237 RPDN 240
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + TG A+K D + V TL E IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 29/227 (12%)
Query: 12 VGEGTYGKVYRAR----EKATGKIVALKKTRLHEDD--EGVPPTTLREVSILRMLSRDPH 65
+GEG +G+V A +K K ++ +DD E + E+ +++M+ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVN 112
++ L+ ++G LY++ EY +L++Y+R+ R G E +
Sbjct: 103 IITLLG---ACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 113 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKY 170
+ S YQL +G+ + +HRDL N+L+ + +KIAD GLAR KK
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDYYKKT 216
Query: 171 THEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG 216
T+ L + + APE L Y+ D+WS + E+ T + +PG
Sbjct: 217 TNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + TG A+K D + V TL E IL
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 81
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 82 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFSE----PHAR 130
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 131 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWTLC 185
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 186 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 231
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 113/244 (46%), Gaps = 45/244 (18%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIV--ALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
+E++G G +G+V+ K+ +LK+ + P L E ++++ L +
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS------PDAFLAEANLMKQLQHQ-RL 79
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
VRL V + +Y++ EYM+ L ++++ +G + +N + + Q+ +G+
Sbjct: 80 VRLYAVVTQEP------IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 131
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEI 174
AF +HRDL+ N+L+ T++ KIAD GLAR PIK
Sbjct: 132 AFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIK------ 184
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLL 230
+ APE + T ++ D+WS + E+VT + +PG + +Q L +R++
Sbjct: 185 ----WTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 239
Query: 231 GTPN 234
N
Sbjct: 240 RPDN 243
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 113/244 (46%), Gaps = 45/244 (18%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIV--ALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
+E++G G +G+V+ K+ +LK+ + P L E ++++ L +
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS------PDAFLAEANLMKQLQHQ-RL 70
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
VRL V + +Y++ EYM+ L ++++ +G + +N + + Q+ +G+
Sbjct: 71 VRLYAVVTQEP------IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 122
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEI 174
AF +HRDL+ N+L+ T++ KIAD GLAR PIK
Sbjct: 123 AFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIK------ 175
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLL 230
+ APE + T ++ D+WS + E+VT + +PG + +Q L +R++
Sbjct: 176 ----WTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 230
Query: 231 GTPN 234
N
Sbjct: 231 RPDN 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + TG A+K D + V TL E IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDPHV 66
++G+G++G VY K K + + +E L E S+++ + HV
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HV 112
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL--- 121
VRL+ V +G+ L ++ DLK Y+RS R EN PV SL M Q+
Sbjct: 113 VRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 168
Query: 122 -CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLW 178
G+A+ + + +HRDL N ++ + T+KI D G+ R T +K +L +
Sbjct: 169 IADGMAYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 227
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ +PE L ++T D+WS + E+ T
Sbjct: 228 WMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 257
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 25/208 (12%)
Query: 11 KVGEGTYGKV----YRAREKATG-KIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
++G G +G V YR R+K I LK+ D E +RE I+ L +P+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE----EMMREAQIMHQLD-NPY 71
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
+VRL+ V Q + L LV E L K++ R E IPV+ V L++Q+ G
Sbjct: 72 IVRLIGVCQAE------ALMLVMEMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMG 122
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRA 181
+ + +HRDL N+L+ + KI+D GL++A YT W + A
Sbjct: 123 MKYLEEKNFVHRDLAARNVLLVNRHYA-KISDFGLSKALGADDSYYTARSAGKWPLKWYA 181
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVT 209
PE + +S+ D+WS E ++
Sbjct: 182 PEC-INFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + TG A+K D + V TL E IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + TG A+K D + V TL E IL
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 96
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 97 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFSE----PHAR 145
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 200
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + TG A+K D + V TL E IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + TG A+K D + V TL E IL
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 96
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 97 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFSE----PHAR 145
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWTLC 200
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D F++++ +G G++G+V + K +G A+K D + V TL E IL
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D F++++ +G G++G+V + K +G A+K D + V TL E IL
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + TG A+K D + V TL E IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYAPGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NL++D++ +K+ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 29/227 (12%)
Query: 12 VGEGTYGKVYRAR----EKATGKIVALKKTRLHEDD--EGVPPTTLREVSILRMLSRDPH 65
+GEG +G+V A +K K ++ +DD E + E+ +++M+ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVN 112
++ L+ ++G LY++ EY +L++Y+R+ R G E +
Sbjct: 103 IINLLG---ACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 113 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKY 170
+ S YQL +G+ + +HRDL N+L+ + ++IAD GLAR KK
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV-MRIADFGLARDINNIDYYKKT 216
Query: 171 THEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG 216
T+ L + + APE L Y+ D+WS + E+ T + +PG
Sbjct: 217 TNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D F++++ +G G++G+V + K +G A+K D + V TL E IL
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D F++++ +G G++G+V + K +G A+K D + V TL E IL
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFAE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D F++++ +G G++G+V + K +G A+K D + V TL E IL
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 116
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 117 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFSE----PHAR 165
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 166 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGATWTLC 220
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 221 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D F++++ +G G++G+V + K +G A+K D + V TL E IL
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 96
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 97 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFSE----PHAR 145
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 200
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D F++++ +G G++G+V + K +G A+K D + V TL E IL
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLA 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + TG A+K D + V TL E IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFXE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D F++++ +G G++G+V + K +G A+K D + V TL E IL
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D F++++ +G G++G+V + K +G A+K D + V TL E IL
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLX 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D F++++ +G G++G+V + K +G A+K D + V TL E IL
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQ 245
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + TG A+K D + V TL E IL
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 96
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 97 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFXE----PHAR 145
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 200
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + TG A+K D + V TL E IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVPGGEMFSHLRRIGRFXE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 132/294 (44%), Gaps = 48/294 (16%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
F KL+++G+G++G+VY+ + T ++VA+K L E ++ + +E+++L P+
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCD-SPY 78
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDT----DLKKYIRSFRQTGENIPVNTVKSLMYQL 121
+ R K L+++ EY+ DL K + + +++ ++
Sbjct: 79 ITRYFGSYLKSTK-----LWIIMEYLGGGSALDLLK--------PGPLEETYIATILREI 125
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
KG+ + H +HRD+K N+L+ + +K+AD G+A T K + T ++ A
Sbjct: 126 LKGLDYLHSERKIHRDIKAANVLLSEQG-DVKLADFGVAGQLTDTQIKRNXFVGTPFWMA 184
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PEV+ S Y D+WS+ EL P +S+L + +F +
Sbjct: 185 PEVIKQSA-YDFKADIWSLGITAIELAKGE---PPNSDLHPMRVLFLI------------ 228
Query: 242 SSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 295
P+ +P +L K + +E L DP R +AK+ ++H +
Sbjct: 229 ---------PKNSPPTLEG---QHSKPFKEFVEACLNKDPRFRPTAKELLKHKF 270
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D F++++ +G G++G+V + K +G A+K D + V TL E IL
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 82
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 83 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFSE----PHAR 131
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D + +++ D G A+ +K T +
Sbjct: 132 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGY-IQVTDFGFAKR----VKGRTWXLC 186
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 187 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 232
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 11 KVGEGTYGKVYRAR-----EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
++GEG +GKV+ A + +VA+K L E E RE +L ML H
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKA--LKEASESARQDFQREAELLTMLQHQ-H 104
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRS------FRQTGENIP-----VNT 113
+VR V EGR +L +VFEYM DL +++RS GE++ +
Sbjct: 105 IVRFFGV----CTEGRPLL-MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQ 159
Query: 114 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYT 171
+ ++ Q+ G+ + G +HRDL N L+ + + +KI D G++R T +
Sbjct: 160 LLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYSTDYYRVGG 218
Query: 172 HEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+L + + PE +L ++T D+WS + E+ T
Sbjct: 219 RTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIFT 255
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + TG A+K D + V TL E IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYAPGGEMFSHLRRIGRFXE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NL++D++ +K+ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 133/317 (41%), Gaps = 51/317 (16%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDE--GVPPTTLREVSILR 58
M D F +G G +G+V+ + KATGK+ A KK + G + + + +
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSL 117
+ SR +V L E +T L LV M+ D++ +I + + +N +++
Sbjct: 242 VHSR--FIVSL-----AYAFETKTDLCLVMTIMNGGDIRYHIYNVDE--DNPGFQEPRAI 292
Query: 118 MY--QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Y Q+ G+ H I++RDLKP N+L+D ++I+DLGLA K
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAG 351
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
T + APE+LLG Y +VD +++ E++ FR G E
Sbjct: 352 TPGFMAPELLLGE-EYDFSVDYFALGVTLYEMIAARG-------------PFRARG---E 394
Query: 236 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDK---DGLDLLEQMLQYDPSKRI-----SA 287
KV E + + L AV DK D E +LQ DP KR+ S
Sbjct: 395 KV-----------ENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSC 443
Query: 288 KKAMEHPYFDDLDKTRL 304
HP F D+ +L
Sbjct: 444 DGLRTHPLFRDISWRQL 460
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 131/312 (41%), Gaps = 51/312 (16%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDE--GVPPTTLREVSILR 58
M D F +G G +G+V+ + KATGK+ A KK + G + + + +
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSL 117
+ SR +V L E +T L LV M+ D++ +I + + +N +++
Sbjct: 242 VHSR--FIVSL-----AYAFETKTDLCLVMTIMNGGDIRYHIYNVDE--DNPGFQEPRAI 292
Query: 118 MY--QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Y Q+ G+ H I++RDLKP N+L+D ++I+DLGLA K
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAG 351
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
T + APE+LLG Y +VD +++ E++ FR G E
Sbjct: 352 TPGFMAPELLLGE-EYDFSVDYFALGVTLYEMIAARG-------------PFRARG---E 394
Query: 236 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDK---DGLDLLEQMLQYDPSKRI-----SA 287
KV E + + L AV DK D E +LQ DP KR+ S
Sbjct: 395 KV-----------ENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSC 443
Query: 288 KKAMEHPYFDDL 299
HP F D+
Sbjct: 444 DGLRTHPLFRDI 455
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D F++++ +G G++G+V + K +G A+K D + V TL E IL
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 90
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 91 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFXE----PHAR 139
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 140 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 194
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 195 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 240
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D F++++ +G G++G+V + K +G A+K D + V TL E IL
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFXE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D F++++ +G G++G+V + K +G A+K D + V TL E IL
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 116
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 117 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFXE----PHAR 165
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 166 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 220
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 221 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 29/227 (12%)
Query: 12 VGEGTYGKVYRAR----EKATGKIVALKKTRLHEDD--EGVPPTTLREVSILRMLSRDPH 65
+GEG +G+V A +K K ++ +DD E + E+ +++M+ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVN 112
++ L+ ++G LY++ EY +L++Y+R+ R G E +
Sbjct: 103 IINLLG---ACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 113 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKY 170
+ S YQL +G+ + +HRDL N+L+ + +KIAD GLAR K
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDYYKNT 216
Query: 171 THEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG 216
T+ L + + APE L Y+ D+WS + E+ T + +PG
Sbjct: 217 TNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDPHV 66
++G+G++G VY K K + + +E L E S+++ + HV
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HV 77
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL--- 121
VRL+ G +G+ L ++ DLK Y+RS R EN PV SL M Q+
Sbjct: 78 VRLL----GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 122 -CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLW 178
G+A+ + + +HRDL N + + T+KI D G+ R T +K +L +
Sbjct: 134 IADGMAYLNANKFVHRDLAARNCXV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ +PE L ++T D+WS + E+ T
Sbjct: 193 WMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 222
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 131/312 (41%), Gaps = 51/312 (16%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDE--GVPPTTLREVSILR 58
M D F +G G +G+V+ + KATGK+ A KK + G + + + +
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSL 117
+ SR +V L E +T L LV M+ D++ +I + + +N +++
Sbjct: 242 VHSR--FIVSL-----AYAFETKTDLCLVMTIMNGGDIRYHIYNVDE--DNPGFQEPRAI 292
Query: 118 MY--QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Y Q+ G+ H I++RDLKP N+L+D ++I+DLGLA K
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAG 351
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
T + APE+LLG Y +VD +++ E++ FR G E
Sbjct: 352 TPGFMAPELLLGE-EYDFSVDYFALGVTLYEMIAARG-------------PFRARG---E 394
Query: 236 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDK---DGLDLLEQMLQYDPSKRI-----SA 287
KV E + + L AV DK D E +LQ DP KR+ S
Sbjct: 395 KV-----------ENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSC 443
Query: 288 KKAMEHPYFDDL 299
HP F D+
Sbjct: 444 DGLRTHPLFRDI 455
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 131/312 (41%), Gaps = 51/312 (16%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDE--GVPPTTLREVSILR 58
M D F +G G +G+V+ + KATGK+ A KK + G + + + +
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSL 117
+ SR +V L E +T L LV M+ D++ +I + + +N +++
Sbjct: 242 VHSR--FIVSL-----AYAFETKTDLCLVMTIMNGGDIRYHIYNVDE--DNPGFQEPRAI 292
Query: 118 MY--QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Y Q+ G+ H I++RDLKP N+L+D ++I+DLGLA K
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAG 351
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 235
T + APE+LLG Y +VD +++ E++ FR G E
Sbjct: 352 TPGFMAPELLLGE-EYDFSVDYFALGVTLYEMIAARG-------------PFRARG---E 394
Query: 236 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDK---DGLDLLEQMLQYDPSKRI-----SA 287
KV E + + L AV DK D E +LQ DP KR+ S
Sbjct: 395 KV-----------ENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSC 443
Query: 288 KKAMEHPYFDDL 299
HP F D+
Sbjct: 444 DGLRTHPLFRDI 455
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 127/293 (43%), Gaps = 42/293 (14%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
++G G++ VY+ + T VA + + + + E L+ L + P++VR
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGL-QHPNIVRFY 91
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
D + K G+ + LV E + LK Y++ F+ + ++S Q+ KG+ F H
Sbjct: 92 DSWESTVK-GKKCIVLVTELXTSGTLKTYLKRFKVX----KIKVLRSWCRQILKGLQFLH 146
Query: 130 GHG--ILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLL 186
I+HRDLK N+ + T ++KI DLGLA TL + ++ T + APE
Sbjct: 147 TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA---TLKRASFAKAVIGTPEFXAPEXY- 202
Query: 187 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 246
Y +VD+++ E T + SE Q I+R +V GV
Sbjct: 203 -EEKYDESVDVYAFGXCXLEXATSEYPY---SECQNAAQIYR-------RVTSGV----- 246
Query: 247 WHEYPQWNPQSL-ATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDD 298
P S A+P + +++E ++ + +R S K + H +F +
Sbjct: 247 -------KPASFDKVAIPEVK----EIIEGCIRQNKDERYSIKDLLNHAFFQE 288
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D F++++ +G G++G+V + K +G A+K D + V TL E IL
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFXE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 11 KVGEGTYGKVYRAR-----EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
++GEG +GKV+ A + +VA+K L E E RE +L ML H
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKA--LKEASESARQDFQREAELLTMLQHQ-H 75
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRS------FRQTGENIP-----VNT 113
+VR G EGR +L +VFEYM DL +++RS GE++ +
Sbjct: 76 IVRFF----GVCTEGRPLL-MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQ 130
Query: 114 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYT 171
+ ++ Q+ G+ + G +HRDL N L+ + + +KI D G++R T +
Sbjct: 131 LLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYSTDYYRVGG 189
Query: 172 HEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+L + + PE +L ++T D+WS + E+ T
Sbjct: 190 RTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIFT 226
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDPHV 66
++G+G++G VY K K + + +E L E S+++ + HV
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HV 90
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL--- 121
VRL+ G +G+ L ++ DLK Y+RS R N PV SL M Q+
Sbjct: 91 VRLL----GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 146
Query: 122 -CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLW 178
G+A+ + + +HRDL N ++ + T+KI D G+ R T +K +L +
Sbjct: 147 IADGMAYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ +PE L ++T D+WS + E+ T
Sbjct: 206 WMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 235
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D F++++ +G G++G+V + K +G A+K D + V TL E IL
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFXE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 11 KVGEGTYGKVYRAR-----EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
++GEG +GKV+ A + +VA+K L E E RE +L ML H
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKA--LKEASESARQDFQREAELLTMLQHQ-H 81
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRS------FRQTGENIP-----VNT 113
+VR G EGR +L +VFEYM DL +++RS GE++ +
Sbjct: 82 IVRFF----GVCTEGRPLL-MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQ 136
Query: 114 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYT 171
+ ++ Q+ G+ + G +HRDL N L+ + + +KI D G++R T +
Sbjct: 137 LLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYSTDYYRVGG 195
Query: 172 HEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+L + + PE +L ++T D+WS + E+ T
Sbjct: 196 RTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIFT 232
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 130/286 (45%), Gaps = 39/286 (13%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+GEG+ G V A +++GK+VA+KK L + EV I+R + +VV +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHE-NVVEMY 94
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 130
+ ++ L++V E+++ I + + E + ++ + + ++ H
Sbjct: 95 NSYLVGDE-----LWVVMEFLEGGALTDIVTHTRMNE----EQIAAVCLAVLQALSVLHA 145
Query: 131 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTH 190
G++HRD+K ++L+ +K++D G + + + + T ++ APE L+
Sbjct: 146 QGVIHRDIKSDSILLTHDG-RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLP 203
Query: 191 YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY 250
Y VD+WS+ + E+V + + L+ + I + + P L N H+
Sbjct: 204 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-------RDNLPP---RLKNLHK- 252
Query: 251 PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P+L L+++L DP++R +A + ++HP+
Sbjct: 253 ----------VSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 284
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT--LREVSILRMLSRDPHVV 67
EK+G G++G V+RA + G VA+K L E D LREV+I++ L R P++V
Sbjct: 43 EKIGAGSFGTVHRA--EWHGSDVAVKI--LMEQDFHAERVNEFLREVAIMKRL-RHPNIV 97
Query: 68 RLMD-VKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTG--ENIPVNTVKSLMYQLCKG 124
M V Q N L +V EY+ R ++G E + S+ Y + KG
Sbjct: 98 LFMGAVTQPPN------LSIVTEYLSRG--SLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
Query: 125 VAFCHGHG--ILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+ + H I+HR+LK NLL+D+K T+K+ D GL+R T + AP
Sbjct: 150 MNYLHNRNPPIVHRNLKSPNLLVDKK-YTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAP 208
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVT 209
EVL + D++S I EL T
Sbjct: 209 EVLRDEPSNEKS-DVYSFGVILWELAT 234
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 130/286 (45%), Gaps = 39/286 (13%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+GEG+ G V A +++GK+VA+KK L + EV I+R + +VV +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHE-NVVEMY 92
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 130
+ ++ L++V E+++ I + + E + ++ + + ++ H
Sbjct: 93 NSYLVGDE-----LWVVMEFLEGGALTDIVTHTRMNE----EQIAAVCLAVLQALSVLHA 143
Query: 131 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTH 190
G++HRD+K ++L+ +K++D G + + + + T ++ APE L+
Sbjct: 144 QGVIHRDIKSDSILLTHDG-RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLP 201
Query: 191 YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY 250
Y VD+WS+ + E+V + + L+ + I + + P L N H+
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-------RDNLPP---RLKNLHK- 250
Query: 251 PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P+L L+++L DP++R +A + ++HP+
Sbjct: 251 ----------VSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 282
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 13/206 (6%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD 71
+G+GTYG VY R+ + +A+K+ + E D E+++ + L + ++V+ +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKE--IPERDSRYSQPLHEEIALHKHL-KHKNIVQYL- 85
Query: 72 VKQGQNKEGRTVLYLVFEYMDTDLKKYIRS-FRQTGENIPVNTVKSLMYQLCKGVAFCHG 130
G E + + + L +RS + +N T+ Q+ +G+ + H
Sbjct: 86 ---GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN--EQTIGFYTKQILEGLKYLHD 140
Query: 131 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVL-LGS 188
+ I+HRD+K N+L++ + LKI+D G ++ I T TL Y APE++ G
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGP 199
Query: 189 THYSTAVDMWSVACIFAELVTKTALF 214
Y A D+WS+ C E+ T F
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 130/286 (45%), Gaps = 39/286 (13%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+GEG+ G V A +++GK+VA+KK L + EV I+R + +VV +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHE-NVVEMY 137
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 130
+ ++ L++V E+++ I + + E + ++ + + ++ H
Sbjct: 138 NSYLVGDE-----LWVVMEFLEGGALTDIVTHTRMNE----EQIAAVCLAVLQALSVLHA 188
Query: 131 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTH 190
G++HRD+K ++L+ +K++D G + + + + T ++ APE L+
Sbjct: 189 QGVIHRDIKSDSILLTHDG-RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLP 246
Query: 191 YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY 250
Y VD+WS+ + E+V + + L+ + I + + P L N H+
Sbjct: 247 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-------RDNLPP---RLKNLHK- 295
Query: 251 PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P+L L+++L DP++R +A + ++HP+
Sbjct: 296 ----------VSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 130/286 (45%), Gaps = 39/286 (13%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+GEG+ G V A +++GK+VA+KK L + EV I+R + +VV +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHE-NVVEMY 87
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 130
+ ++ L++V E+++ I + + E + ++ + + ++ H
Sbjct: 88 NSYLVGDE-----LWVVMEFLEGGALTDIVTHTRMNE----EQIAAVCLAVLQALSVLHA 138
Query: 131 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTH 190
G++HRD+K ++L+ +K++D G + + + + T ++ APE L+
Sbjct: 139 QGVIHRDIKSDSILLTHDG-RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLP 196
Query: 191 YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY 250
Y VD+WS+ + E+V + + L+ + I + + P L N H+
Sbjct: 197 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-------RDNLPP---RLKNLHK- 245
Query: 251 PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P+L L+++L DP++R +A + ++HP+
Sbjct: 246 ----------VSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 277
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 130/286 (45%), Gaps = 39/286 (13%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+GEG+ G V A +++GK+VA+KK L + EV I+R + +VV +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHE-NVVEMY 83
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 130
+ ++ L++V E+++ I + + E + ++ + + ++ H
Sbjct: 84 NSYLVGDE-----LWVVMEFLEGGALTDIVTHTRMNE----EQIAAVCLAVLQALSVLHA 134
Query: 131 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTH 190
G++HRD+K ++L+ +K++D G + + + + T ++ APE L+
Sbjct: 135 QGVIHRDIKSDSILLTHDG-RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLP 192
Query: 191 YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY 250
Y VD+WS+ + E+V + + L+ + I + + P L N H+
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-------RDNLPP---RLKNLHK- 241
Query: 251 PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P+L L+++L DP++R +A + ++HP+
Sbjct: 242 ----------VSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 273
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 13/206 (6%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD 71
+G+GTYG VY R+ + +A+K+ + E D E+++ + L + ++V+ +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKE--IPERDSRYSQPLHEEIALHKHL-KHKNIVQYL- 71
Query: 72 VKQGQNKEGRTVLYLVFEYMDTDLKKYIRS-FRQTGENIPVNTVKSLMYQLCKGVAFCHG 130
G E + + + L +RS + +N T+ Q+ +G+ + H
Sbjct: 72 ---GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN--EQTIGFYTKQILEGLKYLHD 126
Query: 131 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVL-LGS 188
+ I+HRD+K N+L++ + LKI+D G ++ I T TL Y APE++ G
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGP 185
Query: 189 THYSTAVDMWSVACIFAELVTKTALF 214
Y A D+WS+ C E+ T F
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 115/236 (48%), Gaps = 29/236 (12%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIV--ALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
+E++G G +G+V+ K+ +LK+ + P L E ++++ L +
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS------PDAFLAEANLMKQLQHQ-RL 66
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
VRL V + +Y++ EYM+ L ++++ +G + +N + + Q+ +G+
Sbjct: 67 VRLYAVVTQEP------IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 118
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAP 182
AF +HR+L+ N+L+ T++ KIAD GLAR + +YT + + AP
Sbjct: 119 AFIEERNYIHRNLRAANILVS-DTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAP 175
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLLGTPN 234
E + T ++ D+WS + E+VT + +PG + +Q L +R++ N
Sbjct: 176 EAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 230
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + TG A+K D + V TL E IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYAPGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NL++D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT----LREVSILRMLSRDPHV 66
++G+G++G VY K K + + +E L E S+++ + HV
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH-HV 80
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL--- 121
VRL+ G +G+ L ++ DLK Y+RS R N PV SL M Q+
Sbjct: 81 VRLL----GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 136
Query: 122 -CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLW 178
G+A+ + + +HRDL N ++ + T+KI D G+ R T +K +L +
Sbjct: 137 IADGMAYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 195
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ +PE L ++T D+WS + E+ T
Sbjct: 196 WMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 225
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D F++++ +G G++G+V + K +G A+K D + V TL E IL
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + ++ F D +Q
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQ 245
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 130/286 (45%), Gaps = 39/286 (13%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+GEG+ G V A +++GK+VA+KK L + EV I+R + +VV +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE--LLFNEVVIMRDYQHE-NVVEMY 214
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 130
+ ++ L++V E+++ I + + E + ++ + + ++ H
Sbjct: 215 NSYLVGDE-----LWVVMEFLEGGALTDIVTHTRMNE----EQIAAVCLAVLQALSVLHA 265
Query: 131 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTH 190
G++HRD+K ++L+ +K++D G + + + + T ++ APE L+
Sbjct: 266 QGVIHRDIKSDSILLTHDG-RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLP 323
Query: 191 YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY 250
Y VD+WS+ + E+V + + L+ + I + + P L N H+
Sbjct: 324 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-------RDNLPP---RLKNLHK- 372
Query: 251 PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P+L L+++L DP++R +A + ++HP+
Sbjct: 373 ----------VSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 29/227 (12%)
Query: 12 VGEGTYGKVYRAR----EKATGKIVALKKTRLHEDD--EGVPPTTLREVSILRMLSRDPH 65
+GEG +G+V A +K K ++ +DD E + E+ +++M+ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVN 112
++ L+ ++G LY++ Y +L++Y+R+ R G E +
Sbjct: 103 IINLLG---ACTQDGP--LYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 113 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKY 170
+ S YQL +G+ + +HRDL N+L+ + +KIAD GLAR KK
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDYYKKT 216
Query: 171 THEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG 216
T+ L + + APE L Y+ D+WS + E+ T + +PG
Sbjct: 217 TNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + TG A+K D + V TL E IL
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 96
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P + +L K N LY+V EY ++ ++R + E +
Sbjct: 97 QAVNF-PFLTKLEFSFKDNSN------LYMVMEYAPGGEMFSHLRRIGRFSE----PHAR 145
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NL++D++ +K+ D G A+ +K T +
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKR----VKGRTWXLC 200
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 122/297 (41%), Gaps = 37/297 (12%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D E + ++G G YG V + R +G+I A+K+ R + + R + L + R
Sbjct: 34 DDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQ----EQKRLLXDLDISXRT 89
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
+ +EG +++ E DT L K+ + G+ IP + + + + K
Sbjct: 90 VDCPFTVTFYGALFREGD--VWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVK 147
Query: 124 GVAFCHGH-GILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+ H ++HRD+KP N+L++ +K D G++ + K + Y AP
Sbjct: 148 ALEHLHSKLSVIHRDVKPSNVLIN-ALGQVKXCDFGISGYLVDDVAKDI-DAGCKPYXAP 205
Query: 183 EVL---LGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWP 239
E + L YS D+WS+ EL FP DS GTP ++
Sbjct: 206 ERINPELNQKGYSVKSDIWSLGITXIELA--ILRFPYDS-----------WGTPFQQ--- 249
Query: 240 GVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
L E P +PQ A + +D Q L+ + +R + + +HP+F
Sbjct: 250 ----LKQVVEEP--SPQLPAD---KFSAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + TG A+K D + V TL E IL
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 96
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P + +L K N LY+V EY ++ ++R + E +
Sbjct: 97 QAVNF-PFLTKLEFSFKDNSN------LYMVMEYAPGGEMFSHLRRIGRFSE----PHAR 145
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NL++D++ +K+ D G A+ +K T +
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKR----VKGRTWXLC 200
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 22/226 (9%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 73
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMD--TDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
V+RL+D + + L+ E M+ DL +I E + +S +Q+
Sbjct: 74 GVIRLLDWFERPDS-----FVLILERMEPVQDLFDFITERGALQEEL----ARSFFWQVL 124
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAP 182
+ V CH G+LHRD+K N+L+D LK+ D G L YT T Y P
Sbjct: 125 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPP 182
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 228
E + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 228
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 25/208 (12%)
Query: 11 KVGEGTYGKV----YRAREKATG-KIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
++G G +G V YR R+K I LK+ D E + +RE I+ L +P+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEM----MREAQIMHQLD-NPY 397
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
+VRL+ V Q + L LV E L K++ R E IPV+ V L++Q+ G
Sbjct: 398 IVRLIGVCQAE------ALMLVMEMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMG 448
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRA 181
+ + +HR+L N+L+ + KI+D GL++A YT W + A
Sbjct: 449 MKYLEEKNFVHRNLAARNVLLVNRHYA-KISDFGLSKALGADDSYYTARSAGKWPLKWYA 507
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVT 209
PE + +S+ D+WS E ++
Sbjct: 508 PEC-INFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 132/307 (42%), Gaps = 54/307 (17%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTLREVSIL 57
+ M+ FE L+ +G+GT+GKV +EKATG+ A LKK + DE TL E +L
Sbjct: 148 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE--VAHTLTENRVL 205
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKS 116
+ SR P + L Q ++ L V EY + +L ++ R E + +
Sbjct: 206 QN-SRHPFLTALKYSFQTHDR-----LCFVMEYANGGELFFHLSRERVFSE----DRARF 255
Query: 117 LMYQLCKGVAFCHGH-GILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
++ + + H +++RDLK NL++D K +KI D GL +
Sbjct: 256 YGAEIVSALDYLHSEKNVVYRDLKLENLMLD-KDGHIKITDFGLCKEGIKDGATMKTFCG 314
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPN 234
T Y APEV L Y AVD W + + E++ + + D E +F L+
Sbjct: 315 TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELI---- 364
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKK 289
LM +P+ L + LL +L+ DP +R+ AK+
Sbjct: 365 ---------LMEEIRFPR-----------TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKE 404
Query: 290 AMEHPYF 296
M+H +F
Sbjct: 405 IMQHRFF 411
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 29/227 (12%)
Query: 12 VGEGTYGKVYRAR----EKATGKIVALKKTRLHEDD--EGVPPTTLREVSILRMLSRDPH 65
+GEG +G+V A +K K ++ +DD E + E+ +++M+ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVN 112
++ L+ ++G LY++ Y +L++Y+R+ R G E +
Sbjct: 103 IINLLG---ACTQDGP--LYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 113 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKY 170
+ S YQL +G+ + +HRDL N+L+ + +KIAD GLAR KK
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDYYKKT 216
Query: 171 THEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG 216
T+ L + + APE L Y+ D+WS + E+ T + +PG
Sbjct: 217 TNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 45/244 (18%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIV--ALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
+E++G G G+V+ K+ +LK+ + P L E ++++ L +
Sbjct: 18 VERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMS------PDAFLAEANLMKQLQHQ-RL 70
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
VRL V + +Y++ EYM+ L ++++ +G + +N + + Q+ +G+
Sbjct: 71 VRLYAVVTQEP------IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 122
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEI 174
AF +HRDL+ N+L+ T++ KIAD GLAR PIK
Sbjct: 123 AFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDAEXTAREGAKFPIK------ 175
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLL 230
+ APE + T ++ D+WS + E+VT + +PG + +Q L +R++
Sbjct: 176 ----WTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 230
Query: 231 GTPN 234
N
Sbjct: 231 RPDN 234
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 132/307 (42%), Gaps = 54/307 (17%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTLREVSIL 57
+ M+ FE L+ +G+GT+GKV +EKATG+ A LKK + DE TL E +L
Sbjct: 145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE--VAHTLTENRVL 202
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKS 116
+ SR P + L Q ++ L V EY + +L ++ R E + +
Sbjct: 203 QN-SRHPFLTALKYSFQTHDR-----LCFVMEYANGGELFFHLSRERVFSE----DRARF 252
Query: 117 LMYQLCKGVAFCHGH-GILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
++ + + H +++RDLK NL++D K +KI D GL +
Sbjct: 253 YGAEIVSALDYLHSEKNVVYRDLKLENLMLD-KDGHIKITDFGLCKEGIKDGATMKTFCG 311
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPN 234
T Y APEV L Y AVD W + + E++ + + D E +F L+
Sbjct: 312 TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELI---- 361
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKK 289
LM +P+ L + LL +L+ DP +R+ AK+
Sbjct: 362 ---------LMEEIRFPR-----------TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKE 401
Query: 290 AMEHPYF 296
M+H +F
Sbjct: 402 IMQHRFF 408
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 132/307 (42%), Gaps = 54/307 (17%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTLREVSIL 57
+ M+ FE L+ +G+GT+GKV +EKATG+ A LKK + DE TL E +L
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE--VAHTLTENRVL 62
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKS 116
+ SR P + L Q ++ L V EY + +L ++ R E + +
Sbjct: 63 QN-SRHPFLTALKYSFQTHDR-----LCFVMEYANGGELFFHLSRERVFSE----DRARF 112
Query: 117 LMYQLCKGVAFCHGH-GILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
++ + + H +++RDLK NL++D K +KI D GL +
Sbjct: 113 YGAEIVSALDYLHSEKNVVYRDLKLENLMLD-KDGHIKITDFGLCKEGIKDGATMKXFCG 171
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPN 234
T Y APEV L Y AVD W + + E++ + + D E +F L+
Sbjct: 172 TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELI---- 221
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKK 289
LM +P+ L + LL +L+ DP +R+ AK+
Sbjct: 222 ---------LMEEIRFPR-----------TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKE 261
Query: 290 AMEHPYF 296
M+H +F
Sbjct: 262 IMQHRFF 268
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 132/307 (42%), Gaps = 54/307 (17%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTLREVSIL 57
+ M+ FE L+ +G+GT+GKV +EKATG+ A LKK + DE TL E +L
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE--VAHTLTENRVL 63
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKS 116
+ SR P + L Q ++ L V EY + +L ++ R E + +
Sbjct: 64 QN-SRHPFLTALKYSFQTHDR-----LCFVMEYANGGELFFHLSRERVFSE----DRARF 113
Query: 117 LMYQLCKGVAFCHGH-GILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
++ + + H +++RDLK NL++D K +KI D GL +
Sbjct: 114 YGAEIVSALDYLHSEKNVVYRDLKLENLMLD-KDGHIKITDFGLCKEGIKDGATMKXFCG 172
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPN 234
T Y APEV L Y AVD W + + E++ + + D E +F L+
Sbjct: 173 TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELI---- 222
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKK 289
LM +P+ L + LL +L+ DP +R+ AK+
Sbjct: 223 ---------LMEEIRFPR-----------TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKE 262
Query: 290 AMEHPYF 296
M+H +F
Sbjct: 263 IMQHRFF 269
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 132/307 (42%), Gaps = 54/307 (17%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTLREVSIL 57
+ M+ FE L+ +G+GT+GKV +EKATG+ A LKK + DE TL E +L
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVA--HTLTENRVL 64
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKS 116
+ SR P + L Q ++ L V EY + +L ++ R E + +
Sbjct: 65 QN-SRHPFLTALKYSFQTHDR-----LCFVMEYANGGELFFHLSRERVFSE----DRARF 114
Query: 117 LMYQLCKGVAFCHGH-GILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
++ + + H +++RDLK NL++D K +KI D GL +
Sbjct: 115 YGAEIVSALDYLHSEKNVVYRDLKLENLMLD-KDGHIKITDFGLCKEGIKDGATMKXFCG 173
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPN 234
T Y APEV L Y AVD W + + E++ + + D E +F L+
Sbjct: 174 TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELI---- 223
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKK 289
LM +P+ L + LL +L+ DP +R+ AK+
Sbjct: 224 ---------LMEEIRFPR-----------TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKE 263
Query: 290 AMEHPYF 296
M+H +F
Sbjct: 264 IMQHRFF 270
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D F++++ +G G++G+V + K +G A+K D + V TL E IL
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NL++D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE+++ S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPEIII-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 93/226 (41%), Gaps = 20/226 (8%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
++K+GEG + V G ALK+ HE + RE + R+ + P+++R
Sbjct: 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQD--REEAQREADMHRLFNH-PNILR 90
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFC 128
L+ + L+ + L I + G + + + L+ +C+G+
Sbjct: 91 LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 129 HGHGILHRDLKPHNL---------LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY 179
H G HRDLKP N+ LMD +M + +R L ++ + + T+ Y
Sbjct: 151 HAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQ-ALTLQDWAAQRCTISY 209
Query: 180 RAPEVLLGSTH--YSTAVDMWSVACI-----FAELVTKTALFPGDS 218
RAPE+ +H D+WS+ C+ F E GDS
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS 255
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D FE+++ +G G++G+V + TG A+K D + V TL E IL
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 96
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P + +L K N LY+V EY ++ ++R + E +
Sbjct: 97 QAVNF-PFLTKLEFSFKDNSN------LYMVMEYAPGGEMFSHLRRIGRFXE----PHAR 145
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NL++D++ +K+ D G A+ +K T +
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKR----VKGRTWXLC 200
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 108/227 (47%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D F++++ +G G++G+V + K +G A+K D + V TL E IL
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T Y AP ++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEYLAPAIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 35/279 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAR--EKATG---KIVALKKTRLHEDDEGVPPTTLREVSIL 57
+ A +E++GE +GKVY+ A G + VA+K L + EG R ++L
Sbjct: 8 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKT--LKDKAEGPLREEFRHEAML 65
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYI--RS-FRQTGENIPVNT 113
R + P+VV L+ V L ++F Y DL +++ RS G T
Sbjct: 66 RARLQHPNVVCLLGVVTKDQP-----LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 114 VKS---------LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT 164
VKS L+ Q+ G+ + H ++H+DL N+L+ K + +KI+DLGL R
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDK-LNVKISDLGLFREVY 179
Query: 165 LP--IKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFP----GDS 218
K + +L + + APE ++ +S D+WS + E V L P +
Sbjct: 180 AADYYKLLGNSLLPIRWMAPEAIMYGK-FSIDSDIWSYGVVLWE-VFSYGLQPYCGYSNQ 237
Query: 219 ELQQLLHIFRLLGTPNE-KVWPGVSSLMNWHEYPQWNPQ 256
++ +++ ++L P++ W + W+E+P P+
Sbjct: 238 DVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPR 276
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 35/230 (15%)
Query: 12 VGEGTYGKVYRAR---------EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
+GEG +G+V A + T V + K+ E D + E+ +++M+ +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS---DLISEMEMMKMIGK 92
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------ENI 109
+++ L+ ++G LY++ EY +L++Y+++ R G E +
Sbjct: 93 HKNIINLLG---ACTQDGP--LYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 110 PVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPI 167
+ S YQ+ +G+ + +HRDL N+L+ + +KIAD GLAR
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV-MKIADFGLARDIHHIDXX 206
Query: 168 KKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG 216
KK T+ L + + APE L Y+ D+WS + E+ T + +PG
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG 255
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 25/207 (12%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVA--LKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
L+++G G +G V + K + +K+ + ED+ +E + LS P +
Sbjct: 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDE------FFQEAQTMMKLSH-PKL 65
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
V+ V + +Y+V EY+ L Y+RS G+ + + + + Y +C+G+
Sbjct: 66 VKFYGVCSKEYP-----IYIVTEYISNGCLLNYLRS---HGKGLEPSQLLEMCYDVCEGM 117
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAP 182
AF H +HRDL N L+DR + +K++D G+ R + L +Y + T + + AP
Sbjct: 118 AFLESHQFIHRDLAARNCLVDR-DLCVKVSDFGMTR-YVLD-DQYVSSVGTKFPVKWSAP 174
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVT 209
EV YS+ D+W+ + E+ +
Sbjct: 175 EV-FHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 35/279 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAR--EKATG---KIVALKKTRLHEDDEGVPPTTLREVSIL 57
+ A +E++GE +GKVY+ A G + VA+K L + EG R ++L
Sbjct: 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKT--LKDKAEGPLREEFRHEAML 82
Query: 58 RMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYI--RS-FRQTGENIPVNT 113
R + P+VV L+ V L ++F Y DL +++ RS G T
Sbjct: 83 RARLQHPNVVCLLGVVTKDQP-----LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 114 VKS---------LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT 164
VKS L+ Q+ G+ + H ++H+DL N+L+ K + +KI+DLGL R
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDK-LNVKISDLGLFREVY 196
Query: 165 LP--IKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFP----GDS 218
K + +L + + APE ++ +S D+WS + E V L P +
Sbjct: 197 AADYYKLLGNSLLPIRWMAPEAIMYGK-FSIDSDIWSYGVVLWE-VFSYGLQPYCGYSNQ 254
Query: 219 ELQQLLHIFRLLGTPNE-KVWPGVSSLMNWHEYPQWNPQ 256
++ +++ ++L P++ W + W+E+P P+
Sbjct: 255 DVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPR 293
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 108/227 (47%), Gaps = 29/227 (12%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPT-----TLREVSIL 57
+D F++++ +G G++G+V + K +G A+K D + V TL E IL
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL----DKQKVVKLKQIEHTLNEKRIL 95
Query: 58 RMLSRDPHVVRL-MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVK 115
+ ++ P +V+L K N LY+V EY+ ++ ++R + E +
Sbjct: 96 QAVNF-PFLVKLEFSFKDNSN------LYMVMEYVAGGEMFSHLRRIGRFSE----PHAR 144
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T +
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLC 199
Query: 176 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 221
T APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 200 GTPEALAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 136/313 (43%), Gaps = 54/313 (17%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSIL 57
+ M+ F +G G +G+VY R+ TGK+ A+K K R+ L E +L
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET--LALNERIML 242
Query: 58 RMLSRD--PHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTV 114
++S P +V + +K L + + M+ DL ++ E +
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDK-----LSFILDLMNGGDLHYHLSQHGVFSEA----DM 293
Query: 115 KSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTH-E 173
+ ++ G+ H +++RDLKP N+L+D ++I+DLGLA F+ KK H
Sbjct: 294 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG-HVRISDLGLACDFS---KKKPHAS 349
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 233
+ T Y APEVL Y ++ D +S+ C+ +L+ G S +Q
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR------GHSPFRQ----------- 392
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPN-LDKDGLDLLEQMLQYDPSKRI-----SA 287
+ HE + ++A +P+ + LLE +LQ D ++R+ A
Sbjct: 393 --------HKTKDKHEIDRMT-LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGA 443
Query: 288 KKAMEHPYFDDLD 300
++ E P+F LD
Sbjct: 444 QEVKESPFFRSLD 456
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 136/313 (43%), Gaps = 54/313 (17%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSIL 57
+ M+ F +G G +G+VY R+ TGK+ A+K K R+ L E +L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET--LALNERIML 243
Query: 58 RMLSRD--PHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTV 114
++S P +V + +K L + + M+ DL ++ E +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDK-----LSFILDLMNGGDLHYHLSQHGVFSEA----DM 294
Query: 115 KSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTH-E 173
+ ++ G+ H +++RDLKP N+L+D ++I+DLGLA F+ KK H
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG-HVRISDLGLACDFS---KKKPHAS 350
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 233
+ T Y APEVL Y ++ D +S+ C+ +L+ G S +Q
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR------GHSPFRQ----------- 393
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPN-LDKDGLDLLEQMLQYDPSKRI-----SA 287
+ HE + ++A +P+ + LLE +LQ D ++R+ A
Sbjct: 394 --------HKTKDKHEIDRMT-LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGA 444
Query: 288 KKAMEHPYFDDLD 300
++ E P+F LD
Sbjct: 445 QEVKESPFFRSLD 457
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 95/217 (43%), Gaps = 31/217 (14%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR--D 63
E E VG G +G V +A+ +A K VA+K+ + + + LR LSR
Sbjct: 11 IEVEEVVGRGAFGVVCKAKWRA--KDVAIKQIESESERKAF-------IVELRQLSRVNH 61
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM---YQ 120
P++V+L + LV EY + + + E +P T M Q
Sbjct: 62 PNIVKLYGA-------CLNPVCLVMEYAEGG---SLYNVLHGAEPLPYYTAAHAMSWCLQ 111
Query: 121 LCKGVAFCHG---HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 177
+GVA+ H ++HRDLKP NLL+ LKI D G A T+ +
Sbjct: 112 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNNKGSA 168
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALF 214
+ APEV GS +YS D++S I E++T+ F
Sbjct: 169 AWMAPEVFEGS-NYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 134/319 (42%), Gaps = 59/319 (18%)
Query: 4 DAFEKLEKV-GEGTYGKVYRAREKATGKIVALKKTRLHEDDEG-VPPTTLREVSILRMLS 61
D ++ E V GEG + +V T + A+K + E G + REV +L
Sbjct: 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVK---IIEKQPGHIRSRVFREVEMLYQCQ 68
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYI---RSFRQTGENIPVNTVKSL 117
+V+ L++ + +++ YLVFE M + +I R F + ++ V V S
Sbjct: 69 GHRNVLELIEFFEEEDR-----FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASA 123
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMD--RKTMTLKIADLGLARAFTL-----PIKKY 170
+ F H GI HRDLKP N+L + + +KI D GL L PI
Sbjct: 124 L-------DFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIS-- 174
Query: 171 THEILTLW----YRAPEVLLG----STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQ 222
T E+LT Y APEV+ ++ Y D+WS+ I L++ F G
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD- 233
Query: 223 LLHIFRLLGTPNEKVWPGVSSLM------NWHEYPQWNPQSLATAVPNLDKDGLDLLEQM 276
G + P +++ +E+P + ++ A DL+ ++
Sbjct: 234 -------CGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAK-------DLISKL 279
Query: 277 LQYDPSKRISAKKAMEHPY 295
L D +R+SA + ++HP+
Sbjct: 280 LVRDAKQRLSAAQVLQHPW 298
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 136/313 (43%), Gaps = 54/313 (17%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSIL 57
+ M+ F +G G +G+VY R+ TGK+ A+K K R+ L E +L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET--LALNERIML 243
Query: 58 RMLSRD--PHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTV 114
++S P +V + +K L + + M+ DL ++ E +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDK-----LSFILDLMNGGDLHYHLSQHGVFSEA----DM 294
Query: 115 KSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTH-E 173
+ ++ G+ H +++RDLKP N+L+D ++I+DLGLA F+ KK H
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG-HVRISDLGLACDFS---KKKPHAS 350
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 233
+ T Y APEVL Y ++ D +S+ C+ +L+ G S +Q
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR------GHSPFRQ----------- 393
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPN-LDKDGLDLLEQMLQYDPSKRI-----SA 287
+ HE + ++A +P+ + LLE +LQ D ++R+ A
Sbjct: 394 --------HKTKDKHEIDRMT-LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGA 444
Query: 288 KKAMEHPYFDDLD 300
++ E P+F LD
Sbjct: 445 QEVKESPFFRSLD 457
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 136/313 (43%), Gaps = 54/313 (17%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSIL 57
+ M+ F +G G +G+VY R+ TGK+ A+K K R+ L E +L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET--LALNERIML 243
Query: 58 RMLSRD--PHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTV 114
++S P +V + +K L + + M+ DL ++ E +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDK-----LSFILDLMNGGDLHYHLSQHGVFSEA----DM 294
Query: 115 KSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTH-E 173
+ ++ G+ H +++RDLKP N+L+D ++I+DLGLA F+ KK H
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG-HVRISDLGLACDFS---KKKPHAS 350
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 233
+ T Y APEVL Y ++ D +S+ C+ +L+ G S +Q
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR------GHSPFRQ----------- 393
Query: 234 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPN-LDKDGLDLLEQMLQYDPSKRI-----SA 287
+ HE + ++A +P+ + LLE +LQ D ++R+ A
Sbjct: 394 --------HKTKDKHEIDRMT-LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGA 444
Query: 288 KKAMEHPYFDDLD 300
++ E P+F LD
Sbjct: 445 QEVKESPFFRSLD 457
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 95/217 (43%), Gaps = 31/217 (14%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR--D 63
E E VG G +G V +A+ +A K VA+K+ + + + LR LSR
Sbjct: 10 IEVEEVVGRGAFGVVCKAKWRA--KDVAIKQIESESERKAF-------IVELRQLSRVNH 60
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM---YQ 120
P++V+L + LV EY + + + E +P T M Q
Sbjct: 61 PNIVKLYGA-------CLNPVCLVMEYAEGG---SLYNVLHGAEPLPYYTAAHAMSWCLQ 110
Query: 121 LCKGVAFCHG---HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 177
+GVA+ H ++HRDLKP NLL+ LKI D G A T+ +
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNNKGSA 167
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALF 214
+ APEV GS +YS D++S I E++T+ F
Sbjct: 168 AWMAPEVFEGS-NYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 142/343 (41%), Gaps = 60/343 (17%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRML 60
++ +AF + K+G+GT+G+V + K A+K R + + + E IL+ +
Sbjct: 32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVR---NIKKYTRSAKIEADILKKI 88
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLY----LVFEYMDTDLKKYIRSFRQTGENIPVNTVKS 116
++ + VK G+ + Y L+FE + L + I R + +K
Sbjct: 89 -QNDDINNNNIVKY----HGKFMYYDHMCLIFEPLGPSLYEIIT--RNNYNGFHIEDIKL 141
Query: 117 LMYQLCKGVAFCHGHGILHRDLKPHNLLMD------------------------RKTMTL 152
++ K + + + H DLKP N+L+D K+ +
Sbjct: 142 YCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGI 201
Query: 153 KIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTA 212
K+ D G A T + I T YRAPEV+L + + + DMWS C+ AEL T +
Sbjct: 202 KLIDFGCA---TFKSDYHGSIINTRQYRAPEVIL-NLGWDVSSDMWSFGCVLAELYTGSL 257
Query: 213 LFPGDSELQQLLHIFRLLG-TPNEKVWPGV----SSLMNWHEYPQWNPQSLAT--AVPNL 265
LF ++ L + ++ P ++ S +N E P++ ++ ++ ++
Sbjct: 258 LFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHV 317
Query: 266 DKD-----------GLDLLEQMLQYDPSKRISAKKAMEHPYFD 297
K D L +LQ DP+ R S + ++H + +
Sbjct: 318 KKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 69
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 70 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 122
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 123 VRHCHNXGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 180
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 228
+ ++ + +WS+ + ++V F D E+ + FR
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 224
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 12 VGEGTYGKVYRAR---------EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
+GEG +G+V A + T V + K+ E D + E+ +++M+ +
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS---DLISEMEMMKMIGK 84
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------ENI 109
+++ L+ ++G LY++ EY +L++Y+++ R G E +
Sbjct: 85 HKNIINLLG---ACTQDGP--LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 110 PVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPI 167
+ S YQ+ +G+ + +HRDL N+L+ + +KIAD GLAR
Sbjct: 140 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYY 198
Query: 168 KKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG--DSELQQLL 224
KK T+ L + + APE L Y+ D+WS + E+ T + +PG EL +LL
Sbjct: 199 KKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 257
Query: 225 HIFRLLGTPNEKVWPGVSSLMN-WHEYPQWNPQSLATAVPNLDK 267
+ P+ + + WH P P + V +LD+
Sbjct: 258 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP-TFKQLVEDLDR 300
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
+G+G + K Y + T ++ A K K+ L + + +T E++I + L +PHVV
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST--EIAIHKSLD-NPHVVG 90
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFC 128
+ + +Y+V E ++ + + + + + M Q +GV +
Sbjct: 91 FHGFFEDDD-----FVYVVLEICR---RRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 142
Query: 129 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGS 188
H + ++HRDLK NL ++ M +KI D GLA ++ T Y APEVL
Sbjct: 143 HNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKK 201
Query: 189 THYSTAVDMWSVACIFAELVTKTALF 214
H S VD+WS+ CI L+ F
Sbjct: 202 GH-SFEVDIWSLGCILYTLLVGKPPF 226
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 12 VGEGTYGKVYRAR---------EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
+GEG +G+V A + T V + K+ E D + E+ +++M+ +
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS---DLISEMEMMKMIGK 77
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------ENI 109
+++ L+ ++G LY++ EY +L++Y+++ R G E +
Sbjct: 78 HKNIINLLG---ACTQDGP--LYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 110 PVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPI 167
+ S YQ+ +G+ + +HRDL N+L+ + +KIAD GLAR
Sbjct: 133 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYY 191
Query: 168 KKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG--DSELQQLL 224
KK T+ L + + APE L Y+ D+WS + E+ T + +PG EL +LL
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 250
Query: 225 HIFRLLGTPNEKVWPGVSSLMN-WHEYPQWNPQSLATAVPNLDK 267
+ P+ + + WH P P + V +LD+
Sbjct: 251 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP-TFKQLVEDLDR 293
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 12 VGEGTYGKVYRAR---------EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
+GEG +G+V A + T V + K+ E D + E+ +++M+ +
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS---DLISEMEMMKMIGK 85
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------ENI 109
+++ L+ ++G LY++ EY +L++Y+++ R G E +
Sbjct: 86 HKNIINLLG---ACTQDGP--LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 110 PVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPI 167
+ S YQ+ +G+ + +HRDL N+L+ + +KIAD GLAR
Sbjct: 141 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYY 199
Query: 168 KKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG--DSELQQLL 224
KK T+ L + + APE L Y+ D+WS + E+ T + +PG EL +LL
Sbjct: 200 KKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 258
Query: 225 HIFRLLGTPNEKVWPGVSSLMN-WHEYPQWNPQSLATAVPNLDK 267
+ P+ + + WH P P + V +LD+
Sbjct: 259 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP-TFKQLVEDLDR 301
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 12 VGEGTYGKVYRA---REKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
+GEG +G V +E T VA+K +L + L E + ++ S P+V+R
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSH-PNVIR 100
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFR-QTG-ENIPVNTVKSLMYQLCKGV 125
L+ V + +G ++ +M DL Y+ R +TG ++IP+ T+ M + G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVL 185
+ LHRDL N ++ R MT+ +AD GL++ K Y+ + +YR +
Sbjct: 161 EYLSNRNFLHRDLAARNCML-RDDMTVCVADFGLSK------KIYSGD----YYRQGRIA 209
Query: 186 -----------LGSTHYSTAVDMWSVACIFAELVTKTAL-FPG 216
L Y++ D+W+ E+ T+ +PG
Sbjct: 210 KMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPG 252
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 12 VGEGTYGKVYRAR---------EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
+GEG +G+V A + T V + K+ E D + E+ +++M+ +
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS---DLISEMEMMKMIGK 81
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------ENI 109
+++ L+ ++G LY++ EY +L++Y+++ R G E +
Sbjct: 82 HKNIINLLG---ACTQDG--PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 110 PVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPI 167
+ S YQ+ +G+ + +HRDL N+L+ + +KIAD GLAR
Sbjct: 137 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYY 195
Query: 168 KKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG--DSELQQLL 224
KK T+ L + + APE L Y+ D+WS + E+ T + +PG EL +LL
Sbjct: 196 KKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 254
Query: 225 HIFRLLGTPNEKVWPGVSSLMN-WHEYPQWNPQSLATAVPNLDK 267
+ P+ + + WH P P + V +LD+
Sbjct: 255 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP-TFKQLVEDLDR 297
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 12 VGEGTYGKVYRAR---------EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
+GEG +G+V A + T V + K+ E D + E+ +++M+ +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS---DLISEMEMMKMIGK 92
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------ENI 109
+++ L+ ++G LY++ EY +L++Y+++ R G E +
Sbjct: 93 HKNIINLLG---ACTQDGP--LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 110 PVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPI 167
+ S YQ+ +G+ + +HRDL N+L+ + +KIAD GLAR
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYY 206
Query: 168 KKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG--DSELQQLL 224
KK T+ L + + APE L Y+ D+WS + E+ T + +PG EL +LL
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 265
Query: 225 HIFRLLGTPNEKVWPGVSSLMN-WHEYPQWNPQSLATAVPNLDK 267
+ P+ + + WH P P + V +LD+
Sbjct: 266 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP-TFKQLVEDLDR 308
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 12 VGEGTYGKVYRAR---------EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
+GEG +G+V A + T V + K+ E D + E+ +++M+ +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS---DLISEMEMMKMIGK 92
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------ENI 109
+++ L+ ++G LY++ EY +L++Y+++ R G E +
Sbjct: 93 HKNIINLLG---ACTQDGP--LYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 110 PVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPI 167
+ S YQ+ +G+ + +HRDL N+L+ + +KIAD GLAR
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYY 206
Query: 168 KKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG--DSELQQLL 224
KK T+ L + + APE L Y+ D+WS + E+ T + +PG EL +LL
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 265
Query: 225 HIFRLLGTPNEKVWPGVSSLMN-WHEYPQWNPQSLATAVPNLDK 267
+ P+ + + WH P P + V +LD+
Sbjct: 266 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP-TFKQLVEDLDR 308
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 89
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 90 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 142
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 200
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 228
+ ++ + +WS+ + ++V F D E+ + FR
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 244
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 111/249 (44%), Gaps = 43/249 (17%)
Query: 52 REVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPV 111
+E++IL+ L P+VV+L++V N++ LY+VFE ++ + + + E+
Sbjct: 85 QEIAILKKLDH-PNVVKLVEVLDDPNEDH---LYMVFELVNQGPVMEVPTLKPLSED--- 137
Query: 112 NTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT 171
+ L KG+ + H I+HRD+KP NLL+ +KIAD G++ F +
Sbjct: 138 -QARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDG-HIKIADFGVSNEFKGSDALLS 195
Query: 172 HEILTLWYRAPEVLLGS--THYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL 229
+ + T + APE L + A+D+W++ L+ F
Sbjct: 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVT--------------------LYCFVF 235
Query: 230 LGTP--NEKVWPGVSSLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 286
P +E++ S + + E+P P++ +D DL+ +ML +P RI
Sbjct: 236 GQCPFMDERIMCLHSKIKSQALEFPDQ---------PDIAEDLKDLITRMLDKNPESRIV 286
Query: 287 AKKAMEHPY 295
+ HP+
Sbjct: 287 VPEIKLHPW 295
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 88
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 89 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 141
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 142 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 199
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 228
+ ++ + +WS+ + ++V F D E+ + FR
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 243
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 88
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 89 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 141
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 142 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 199
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 228
+ ++ + +WS+ + ++V F D E+ + FR
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 243
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 89
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 90 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 142
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 200
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 228
+ ++ + +WS+ + ++V F D E+ + FR
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 244
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 89
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 90 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 142
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 200
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 228
+ ++ + +WS+ + ++V F D E+ + FR
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 244
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 74
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 75 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 127
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 185
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 228
+ ++ + +WS+ + ++V F D E+ + FR
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 229
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 73
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 74 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 126
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 184
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 228
+ ++ + +WS+ + ++V F D E+ + FR
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 228
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 74
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 75 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 127
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 185
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 228
+ ++ + +WS+ + ++V F D E+ + FR
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 229
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 40/239 (16%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
++ + ++++G G +G+V+ K VA+K + P + L E I++ L D
Sbjct: 9 ESLQLIKRLGNGQFGEVWMGTWNGNTK-VAIKTLK---PGTMSPESFLEEAQIMKKLKHD 64
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGEN--IPVNTVKSLMYQL 121
+V+L V + +Y+V EYM+ K + F + GE + + + + Q+
Sbjct: 65 -KLVQLYAVVSEEP------IYIVTEYMN---KGSLLDFLKDGEGRALKLPNLVDMAAQV 114
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-----------AFTLPIKKY 170
G+A+ +HRDL+ N+L+ + KIAD GLAR PIK
Sbjct: 115 AAGMAYIERMNYIHRDLRSANILVG-NGLICKIADFGLARLIEDNEXTARQGAKFPIK-- 171
Query: 171 THEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPGDSELQQLLHIFR 228
+ APE L ++ D+WS + ELVTK + +PG + + L + R
Sbjct: 172 --------WTAPEAAL-YGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER 221
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 129/307 (42%), Gaps = 50/307 (16%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILRM 59
D FE L +G+G++GKV ++ T K+ A+K K + E +E +E+ I++
Sbjct: 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEV--RNVFKELQIMQG 71
Query: 60 LSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY 119
L P +V L Q + +F +D L +R Q + TVK +
Sbjct: 72 LEH-PFLVNLWYSFQDEED--------MFMVVDLLLGGDLRYHLQQNVHFKEETVKLFIC 122
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIK-KYTHEILTLW 178
+L + + I+HRD+KP N+L+D + I D +A LP + + T T
Sbjct: 123 ELVMALDYLQNQRIIHRDMKPDNILLDEHG-HVHITDFNIAA--MLPRETQITTMAGTKP 179
Query: 179 YRAPEVLLG--STHYSTAVDMWSVACIFAELV--TKTALFPGDSELQQLLHIFRLLGTPN 234
Y APE+ YS AVD WS+ EL+ + + ++++H F
Sbjct: 180 YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTY 239
Query: 235 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH- 293
W ++ + LL+++L+ +P +R S +++
Sbjct: 240 PSAW---------------------------SQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272
Query: 294 PYFDDLD 300
PY +D++
Sbjct: 273 PYMNDIN 279
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 102/230 (44%), Gaps = 35/230 (15%)
Query: 12 VGEGTYGKVYRAR---------EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
+GEG +G+V A + T V + K+ E D + E+ +++M+ +
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS---DLISEMEMMKMIGK 133
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------ENI 109
+++ L+ LY++ EY +L++Y+++ R G E +
Sbjct: 134 HKNIINLLGACTQDGP-----LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 110 PVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPI 167
+ S YQ+ +G+ + +HRDL N+L+ + +KIAD GLAR
Sbjct: 189 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYY 247
Query: 168 KKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG 216
KK T+ L + + APE L Y+ D+WS + E+ T + +PG
Sbjct: 248 KKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG 296
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 108
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 109 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 161
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 162 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 219
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 228
+ ++ + +WS+ + ++V F D E+ + FR
Sbjct: 220 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 263
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 74
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 75 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 127
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 185
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 228
+ ++ + +WS+ + ++V F D E+ + FR
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 229
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
+G+G + K Y + T ++ A K K+ L + + +T E++I + L +PHVV
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST--EIAIHKSLD-NPHVVG 106
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFC 128
+ + +Y+V E ++ + + + + + M Q +GV +
Sbjct: 107 FHGFFEDDD-----FVYVVLEICR---RRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 129 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGS 188
H + ++HRDLK NL ++ M +KI D GLA ++ T Y APEVL
Sbjct: 159 HNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKK 217
Query: 189 THYSTAVDMWSVACIFAELVTKTALF 214
H S VD+WS+ CI L+ F
Sbjct: 218 GH-SFEVDIWSLGCILYTLLVGKPPF 242
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 96
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 97 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 149
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 150 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 207
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 228
+ ++ + +WS+ + ++V F D E+ + FR
Sbjct: 208 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 251
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 116
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 117 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 169
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 170 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 227
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 228
+ ++ + +WS+ + ++V F D E+ + FR
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 271
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 72
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 73 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 125
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 126 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 183
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 228
+ ++ + +WS+ + ++V F D E+ + FR
Sbjct: 184 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 227
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
+G+G + K Y + T ++ A K K+ L + + +T E++I + L +PHVV
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST--EIAIHKSLD-NPHVVG 106
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFC 128
+ + +Y+V E ++ + + + + + M Q +GV +
Sbjct: 107 FHGFFEDDD-----FVYVVLEICR---RRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 129 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGS 188
H + ++HRDLK NL ++ M +KI D GLA ++ T Y APEVL
Sbjct: 159 HNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKK 217
Query: 189 THYSTAVDMWSVACIFAELVTKTALF 214
H S VD+WS+ CI L+ F
Sbjct: 218 GH-SFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 116
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 117 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 169
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 170 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 227
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 228
+ ++ + +WS+ + ++V F D E+ + FR
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 271
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 121
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 122 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 174
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 175 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 232
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 228
+ ++ + +WS+ + ++V F D E+ + FR
Sbjct: 233 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 276
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 69
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 70 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 122
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 180
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 228
+ ++ + +WS+ + ++V F D E+ + FR
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 224
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 101
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 102 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 154
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 212
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 228
+ ++ + +WS+ + ++V F D E+ + FR
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 256
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 27/218 (12%)
Query: 1 MVMDAFEK--LEKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSI 56
MV+D E ++++G G +G V+ K I +K+ + EDD + E +
Sbjct: 22 MVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDD------FIEEAEV 75
Query: 57 LRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVK 115
+ LS P +V+L V Q + LVFE+M+ L Y+R+ R T+
Sbjct: 76 MMKLSH-PKLVQLYGVCLEQAP-----ICLVFEFMEHGCLSDYLRTQRGL---FAAETLL 126
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 175
+ +C+G+A+ ++HRDL N L+ + +K++D G+ R F L +YT
Sbjct: 127 GMCLDVCEGMAYLEEACVIHRDLAARNCLVG-ENQVIKVSDFGMTR-FVLD-DQYTSSTG 183
Query: 176 TLW---YRAPEVLLGSTHYSTAVDMWSVACIFAELVTK 210
T + + +PEV + YS+ D+WS + E+ ++
Sbjct: 184 TKFPVKWASPEV-FSFSRYSSKSDVWSFGVLMWEVFSE 220
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
+G+G + K Y + T ++ A K K+ L + + +T E++I + L +PHVV
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST--EIAIHKSLD-NPHVVG 106
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFC 128
+ + +Y+V E ++ + + + + + M Q +GV +
Sbjct: 107 FHGFFEDDD-----FVYVVLEICR---RRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 129 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGS 188
H + ++HRDLK NL ++ M +KI D GLA ++ T Y APEVL
Sbjct: 159 HNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKK 217
Query: 189 THYSTAVDMWSVACIFAELVTKTALF 214
H S VD+WS+ CI L+ F
Sbjct: 218 GH-SFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 18/216 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 102
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 103 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 155
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 213
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 220
+ ++ + +WS+ + ++V F D E+
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 12 VGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRL 69
+G+G +G VY ++A +I K+ + LRE ++R L+ P+V+ L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNH-PNVLAL 87
Query: 70 MDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFC 128
+ + EG + +++ YM DL ++IRS ++ N V + S Q+ +G+ +
Sbjct: 88 IGIML--PPEG--LPHVLLPYMCHGDLLQFIRSPQR---NPTVKDLISFGLQVARGMEYL 140
Query: 129 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT----LPIKKYTHEILTLWYRAPEV 184
+HRDL N ++D ++ T+K+AD GLAR ++++ H L + + A E
Sbjct: 141 AEQKFVHRDLAARNCMLD-ESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALES 199
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTA 212
L + ++T D+WS + EL+T+ A
Sbjct: 200 -LQTYRFTTKSDVWSFGVLLWELLTRGA 226
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 18/216 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 69
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 70 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 122
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 180
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 220
+ ++ + +WS+ + ++V F D E+
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 18/216 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 101
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 102 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 154
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 212
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 220
+ ++ + +WS+ + ++V F D E+
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 18/216 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 102
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 103 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 155
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 213
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 220
+ ++ + +WS+ + ++V F D E+
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 18/216 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 101
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 102 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 154
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 212
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 220
+ ++ + +WS+ + ++V F D E+
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 18/216 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 102
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 103 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 155
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 213
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 220
+ ++ + +WS+ + ++V F D E+
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 18/216 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 102
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 103 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 155
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 213
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 220
+ ++ + +WS+ + ++V F D E+
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 18/216 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALK---KTRLHEDDEGVPPTTLR---EVSILRMLSRD-P 64
+G G +G VY + VA+K K R+ D G P R EV +L+ +S
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI--SDWGELPNGTRVPMEVVLLKKVSSGFS 101
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
V+RL+D + + VL L DL +I E + +S +Q+ +
Sbjct: 102 GVIRLLDWFE---RPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEA 154
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEV 184
V CH G+LHRD+K N+L+D LK+ D G L YT T Y PE
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEW 212
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 220
+ ++ + +WS+ + ++V F D E+
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G+G +G+V+ T + VA+K + P L+E +++ L R +V+L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKL-RHEKLVQLY 76
Query: 71 DVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + +Y+V EYM+ L +++ +TG+ + + + + Q+ G+A+
Sbjct: 77 AVVSEEP------IYIVTEYMNKGSLLDFLKG--ETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEVLL 186
+HRDL+ N+L+ + + K+AD GLAR + +YT + + APE L
Sbjct: 129 RMNYVHRDLRAANILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL 185
Query: 187 GSTHYSTAVDMWSVACIFAELVTKTAL-FPG 216
++ D+WS + EL TK + +PG
Sbjct: 186 -YGRFTIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 8 KLEK-VGEGTYGKVYRAREKATGKIVA--LKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
KLEK +G G +G+V+ A K+ +K + + L E ++++ L D
Sbjct: 185 KLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE------AFLAEANVMKTLQHD- 237
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
+V+L V + +Y++ E+M L +++S G P+ + Q+ +
Sbjct: 238 KLVKLHAVVT------KEPIYIITEFMAKGSLLDFLKS--DEGSKQPLPKLIDFSAQIAE 289
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTLPIKKYTHEILTLWYRAP 182
G+AF +HRDL+ N+L+ ++ KIAD GLAR PIK + AP
Sbjct: 290 GMAFIEQRNYIHRDLRAANILVS-ASLVCKIADFGLARVGAKFPIK----------WTAP 338
Query: 183 EVL-LGSTHYSTAVDMWSVACIFAELVTKTAL-FPGDS 218
E + GS ++ D+WS + E+VT + +PG S
Sbjct: 339 EAINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPGMS 374
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 10 EKVGE-GTYGKVYRAREKATGKIVALK--KTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
E +GE G +GKVY+A+ K T + A K T+ E+ E + E+ IL P++
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY----MVEIDILASCDH-PNI 69
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
V+L+D +N + + +D + + R ++ ++ + Q +
Sbjct: 70 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTES-------QIQVVCKQTLDALN 122
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGL-ARAFTLPIKKYTHEILTLWYRAPEVL 185
+ H + I+HRDLK N+L +K+AD G+ A+ I++ I T ++ APEV+
Sbjct: 123 YLHDNKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVV 181
Query: 186 LGSTH----YSTAVDMWSVACIFAELV 208
+ T Y D+WS+ E+
Sbjct: 182 MCETSKDRPYDYKADVWSLGITLIEMA 208
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 35/230 (15%)
Query: 12 VGEGTYGKVYRAR---------EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
+GEG +G+V A + T V + K+ E D + E+ +++M+ +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS---DLISEMEMMKMIGK 92
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTG------------ENI 109
+++ L+ ++G LY++ EY +L++Y+++ G E +
Sbjct: 93 HKNIINLLG---ACTQDGP--LYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 110 PVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPI 167
+ S YQ+ +G+ + +HRDL N+L+ + +KIAD GLAR
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYY 206
Query: 168 KKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG 216
KK T+ L + + APE L Y+ D+WS + E+ T + +PG
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG 255
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 38/219 (17%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G+G +G+V+ T + VA+K + P L+E +++ L R +V+L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKL-RHEKLVQLY 76
Query: 71 DVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + +Y+V EYM+ L +++ +TG+ + + + + Q+ G+A+
Sbjct: 77 AVVSEEP------IYIVTEYMNKGSLLDFLKG--ETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEILTLW 178
+HRDL+ N+L+ + + K+AD GLAR PIK
Sbjct: 129 RMNYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEWTARQGAKFPIK---------- 177
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG 216
+ APE L ++ D+WS + EL TK + +PG
Sbjct: 178 WTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G+G +G+V+ T + VA+K + P L+E +++ L R +V+L
Sbjct: 18 KLGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKL-RHEKLVQLY 72
Query: 71 DVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + +Y+V EYM L +++ +TG+ + + + + Q+ G+A+
Sbjct: 73 AVVSEEP------IYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE 124
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEVLL 186
+HRDL+ N+L+ + + K+AD GLAR + +YT + + APE L
Sbjct: 125 RMNYVHRDLRAANILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL 181
Query: 187 GSTHYSTAVDMWSVACIFAELVTKTAL-FPG 216
++ D+WS + EL TK + +PG
Sbjct: 182 -YGRFTIKSDVWSFGILLTELTTKGRVPYPG 211
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 18/218 (8%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++ E L ++G GT G+V++ R + TG ++A+K+ R + E L ++ ++
Sbjct: 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKE-ENKRILMDLDVVLKSHD 82
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P++V+ T +++ E M T +K + R G IP + + +
Sbjct: 83 CPYIVQCFGTFITN-----TDVFIAMELMGTCAEKLKK--RMQGP-IPERILGKMTVAIV 134
Query: 123 KGVAFC-HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 181
K + + HG++HRD+KP N+L+D + +K+ D G++ + K Y A
Sbjct: 135 KALYYLKEKHGVIHRDVKPSNILLDERGQ-IKLCDFGISGRL-VDDKAKDRSAGCAAYMA 192
Query: 182 PEVL----LGSTHYSTAVDMWSVACIFAELVTKTALFP 215
PE + Y D+WS+ EL T FP
Sbjct: 193 PERIDPPDPTKPDYDIRADVWSLGISLVELA--TGQFP 228
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVA---LKKTRLHEDDEGVPPTTLREVSILRMLSR 62
+ + +G G +G V+ A +K K V +KK ++ ED P + + +LSR
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 63 DPH--VVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
H +++++D+ + Q LV E + L + R + P+ + + Q
Sbjct: 86 VEHANIIKVLDIFENQG-----FFQLVMEKHGSGLDLFAFIDRHPRLDEPLASY--IFRQ 138
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
L V + I+HRD+K N+++ + T+K+ D G A A+ K + T+ Y
Sbjct: 139 LVSAVGYLRLKDIIHRDIKDENIVI-AEDFTIKLIDFGSA-AYLERGKLFYTFCGTIEYC 196
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALF 214
APEVL+G+ + ++MWS+ LV + F
Sbjct: 197 APEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G+G +G+V+ T + VA+K + P L+E +++ L R +V+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKL-RHEKLVQLY 245
Query: 71 DVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + +Y+V EYM L +++ +TG+ + + + + Q+ G+A+
Sbjct: 246 AVVSEEP------IYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEVLL 186
+HRDL+ N+L+ + + K+AD GLAR + +YT + + APE L
Sbjct: 298 RMNYVHRDLRAANILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL 354
Query: 187 GSTHYSTAVDMWSVACIFAELVTKTAL-FPG 216
++ D+WS + EL TK + +PG
Sbjct: 355 YG-RFTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G+G +G+V+ T + VA+K + P L+E +++ L R +V+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKL-RHEKLVQLY 245
Query: 71 DVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + +Y+V EYM L +++ +TG+ + + + + Q+ G+A+
Sbjct: 246 AVVSEEP------IYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEVLL 186
+HRDL+ N+L+ + + K+AD GLAR + +YT + + APE L
Sbjct: 298 RMNYVHRDLRAANILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL 354
Query: 187 GSTHYSTAVDMWSVACIFAELVTKTAL-FPG 216
++ D+WS + EL TK + +PG
Sbjct: 355 YG-RFTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 133/319 (41%), Gaps = 59/319 (18%)
Query: 4 DAFEKLEKV-GEGTYGKVYRAREKATGKIVALKKTRLHEDDEG-VPPTTLREVSILRMLS 61
D ++ E V GEG + +V T + A+K + E G + REV +L
Sbjct: 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVK---IIEKQPGHIRSRVFREVEMLYQCQ 68
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYI---RSFRQTGENIPVNTVKSL 117
+V+ L++ + +++ YLVFE M + +I R F + ++ V V S
Sbjct: 69 GHRNVLELIEFFEEEDR-----FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASA 123
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMD--RKTMTLKIADLGLARAFTL-----PIKKY 170
+ F H GI HRDLKP N+L + + +KI D L L PI
Sbjct: 124 L-------DFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIS-- 174
Query: 171 THEILTLW----YRAPEVLLG----STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQ 222
T E+LT Y APEV+ ++ Y D+WS+ I L++ F G
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD- 233
Query: 223 LLHIFRLLGTPNEKVWPGVSSLM------NWHEYPQWNPQSLATAVPNLDKDGLDLLEQM 276
G + P +++ +E+P + ++ A DL+ ++
Sbjct: 234 -------CGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAK-------DLISKL 279
Query: 277 LQYDPSKRISAKKAMEHPY 295
L D +R+SA + ++HP+
Sbjct: 280 LVRDAKQRLSAAQVLQHPW 298
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G+G +G+V+ T + VA+K + P L+E +++ L R +V+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKL-RHEKLVQLY 245
Query: 71 DVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + +Y+V EYM L +++ +TG+ + + + + Q+ G+A+
Sbjct: 246 AVVSEEP------IYIVGEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEVLL 186
+HRDL+ N+L+ + + K+AD GLAR + +YT + + APE L
Sbjct: 298 RMNYVHRDLRAANILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL 354
Query: 187 GSTHYSTAVDMWSVACIFAELVTKTAL-FPG 216
++ D+WS + EL TK + +PG
Sbjct: 355 -YGRFTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD 71
+G G +GKVY+ + K VALK+ R E +G+ ++ R PH+V L+
Sbjct: 47 IGHGVFGKVYKGVLRDGAK-VALKR-RTPESSQGIEEFETEIETL--SFCRHPHLVSLIG 102
Query: 72 VKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVK-SLMYQLCKGVA--- 126
+N+ + L+++YM+ +LK+++ G ++P ++ ++C G A
Sbjct: 103 FCDERNE-----MILIYKYMENGNLKRHL-----YGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 127 -FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPE 183
+ H I+HRD+K N+L+D + KI D G+++ T + + ++ TL Y PE
Sbjct: 153 HYLHTRAIIHRDVKSINILLD-ENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPE 211
Query: 184 VLL------GSTHYSTAVDMWSVACIFAELV 208
+ S YS V ++ V C + +V
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 36/219 (16%)
Query: 12 VGEGTYGKVYRAREKATG--KIVALKKTRL------HEDDEGVPPTTLREVSILRMLSRD 63
+GEG +G+V +AR K G A+K+ + H D G E+ +L L
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG-------ELEVLCKLGHH 75
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFR------------QTGENIP 110
P+++ L+ E R LYL EY +L ++R R T +
Sbjct: 76 PNIINLLGA-----CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 130
Query: 111 VNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKY 170
+ + +G+ + +HRDL N+L+ + KIAD GL+R + +KK
Sbjct: 131 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA-KIADFGLSRGQEVYVKKT 189
Query: 171 THEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ W L + Y+T D+WS + E+V+
Sbjct: 190 MGRLPVRWMAIES--LNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 110/266 (41%), Gaps = 27/266 (10%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV-SILRMLSRDPHVVRLM 70
+G G +G+V A K + + EG + R + S L++L H + ++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM------------ 118
++ K G ++ +V +L Y+RS R E +P T + L
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN--EFVPYKTPEDLYKDFLTLEHLICY 153
Query: 119 -YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTL---PIKKYTHEI 174
+Q+ KG+ F +HRDL N+L+ K + +KI D GLAR ++K +
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIXKDPDXVRKGDARL 212
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRLL 230
W APE + Y+ D+WS + E+ + A +PG D E + L +
Sbjct: 213 PLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 270
Query: 231 GTPNEKVWPGVSSLMN-WHEYPQWNP 255
P+ ++++ WH P P
Sbjct: 271 RAPDYTTPEMYQTMLDCWHGEPSQRP 296
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 36/219 (16%)
Query: 12 VGEGTYGKVYRAREKATG--KIVALKKTRL------HEDDEGVPPTTLREVSILRMLSRD 63
+GEG +G+V +AR K G A+K+ + H D G E+ +L L
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG-------ELEVLCKLGHH 85
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFR------------QTGENIP 110
P+++ L+ E R LYL EY +L ++R R T +
Sbjct: 86 PNIINLLGA-----CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 140
Query: 111 VNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKY 170
+ + +G+ + +HRDL N+L+ + KIAD GL+R + +KK
Sbjct: 141 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA-KIADFGLSRGQEVYVKKT 199
Query: 171 THEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ W L + Y+T D+WS + E+V+
Sbjct: 200 MGRLPVRWMAIES--LNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMD 71
+G G +GKVY+ + K VALK+ R E +G+ ++ R PH+V L+
Sbjct: 47 IGHGVFGKVYKGVLRDGAK-VALKR-RTPESSQGIEEFETEIETL--SFCRHPHLVSLIG 102
Query: 72 VKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVK-SLMYQLCKGVA--- 126
+N+ + L+++YM+ +LK+++ G ++P ++ ++C G A
Sbjct: 103 FCDERNE-----MILIYKYMENGNLKRHL-----YGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 127 -FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPE 183
+ H I+HRD+K N+L+D + KI D G+++ T + + ++ TL Y PE
Sbjct: 153 HYLHTRAIIHRDVKSINILLD-ENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPE 211
Query: 184 VLL------GSTHYSTAVDMWSVACIFAELV 208
+ S YS V ++ V C + +V
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 26/213 (12%)
Query: 11 KVGEGTYGKVYRAREKATGKIV--ALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
K+G+G +G+V+ T ++ LK + P L+E +++ L R +V+
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS------PEAFLQEAQVMKKL-RHEKLVQ 326
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAF 127
L V + +Y+V EYM L +++ +TG+ + + + + Q+ G+A+
Sbjct: 327 LYAVVSEE------PIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAY 378
Query: 128 CHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEV 184
+HRDL+ N+L+ + + K+AD GLAR + +YT + + APE
Sbjct: 379 VERMNYVHRDLRAANILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEA 435
Query: 185 LLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG 216
L ++ D+WS + EL TK + +PG
Sbjct: 436 AL-YGRFTIKSDVWSFGILLTELTTKGRVPYPG 467
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 55/267 (20%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 80
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY---QLCKGVA 126
V + Y++ E+M +L Y+R + N V L+Y Q+ +
Sbjct: 81 GVCTREPP-----FYIIIEFMTYGNLLDYLRECNRQEVNAVV-----LLYMATQISSAME 130
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEIL 175
+ +HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 131 YLEKKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPIK------- 182
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFR 228
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R
Sbjct: 183 ---WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 238
Query: 229 LLGTPNEKVWPGVSSLMNWHEYPQWNP 255
G P EKV+ + + W QWNP
Sbjct: 239 PEGCP-EKVYELMRAC--W----QWNP 258
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G+G +G+V+ T + VA+K + P L+E +++ L R +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKL-RHEKLVQLY 79
Query: 71 DVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + +Y+V EYM L +++ + G+ + + + + Q+ G+A+
Sbjct: 80 AVVSEEP------IYIVIEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEVLL 186
+HRDL+ N+L+ + + K+AD GLAR + +YT + + APE L
Sbjct: 132 RMNYVHRDLRAANILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 187 GSTHYSTAVDMWSVACIFAELVTKTAL-FPG 216
++ D+WS + EL TK + +PG
Sbjct: 189 -YGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 49/264 (18%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 73
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + Y++ E+M +L Y+R + + + + + Q+ + +
Sbjct: 74 GVCTREPP-----FYIIIEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLE 126
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEILTLW 178
+HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 127 KKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTXTAHAGAKFPIK---------- 175
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG--DSELQQLLH----IFRLLG 231
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R G
Sbjct: 176 WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEG 234
Query: 232 TPNEKVWPGVSSLMNWHEYPQWNP 255
P EKV+ + + W QWNP
Sbjct: 235 CP-EKVYELMRAC--W----QWNP 251
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 55/267 (20%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 76
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY---QLCKGVA 126
V + Y++ E+M +L Y+R + N V L+Y Q+ +
Sbjct: 77 GVCTREPP-----FYIIIEFMTYGNLLDYLRECNRQEVNAVV-----LLYMATQISSAME 126
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEIL 175
+ +HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 127 YLEKKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTXTAHAGAKFPIK------- 178
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFR 228
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R
Sbjct: 179 ---WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 234
Query: 229 LLGTPNEKVWPGVSSLMNWHEYPQWNP 255
G P EKV+ + + W QWNP
Sbjct: 235 PEGCP-EKVYELMRAC--W----QWNP 254
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 25/208 (12%)
Query: 9 LEKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
++++G G +G V+ K I +++ + E+D + E ++ LS P +
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED------FIEEAEVMMKLSH-PKL 64
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
V+L V Q + LVFE+M+ L Y+R+ R T+ + +C+G+
Sbjct: 65 VQLYGVCLEQAP-----ICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGM 116
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAP 182
A+ ++HRDL N L+ + +K++D G+ R F L +YT T + + +P
Sbjct: 117 AYLEEASVIHRDLAARNCLVG-ENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFPVKWASP 173
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTK 210
EV + YS+ D+WS + E+ ++
Sbjct: 174 EV-FSFSRYSSKSDVWSFGVLMWEVFSE 200
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 49/264 (18%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 75
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + Y++ E+M +L Y+R + + + + + Q+ + +
Sbjct: 76 GVCTREPP-----FYIIIEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLE 128
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEILTLW 178
+HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 129 KKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPIK---------- 177
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFRLLG 231
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R G
Sbjct: 178 WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Query: 232 TPNEKVWPGVSSLMNWHEYPQWNP 255
P EKV+ + + W QWNP
Sbjct: 237 CP-EKVYELMRAC--W----QWNP 253
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G+G +G+V+ T + VA+K + P L+E +++ L R +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKL-RHEKLVQLY 79
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + +Y+V EYM L +++ + G+ + + + + Q+ G+A+
Sbjct: 80 AVVSEEP------IYIVMEYMSKGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEVLL 186
+HRDL+ N+L+ + + K+AD GLAR + +YT + + APE L
Sbjct: 132 RMNYVHRDLRAANILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 187 GSTHYSTAVDMWSVACIFAELVTKTAL-FPG 216
++ D+WS + EL TK + +PG
Sbjct: 189 -YGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 10 EKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVV 67
E +G G +G VY + KI K+ D G L E I++ S P+V+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH-PNVL 93
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
L+ + EG ++ V YM DL+ +IR+ N V + Q+ KG+
Sbjct: 94 SLLGI--CLRSEGSPLV--VLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMK 146
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF----TLPIKKYTHEILTLWYRAP 182
+ +HRDL N ++D K T+K+AD GLAR + T L + + A
Sbjct: 147 YLASKKFVHRDLAARNCMLDEK-FTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMAL 205
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTA 212
E L + ++T D+WS + EL+T+ A
Sbjct: 206 ES-LQTQKFTTKSDVWSFGVLLWELMTRGA 234
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 10 EKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVV 67
E +G G +G VY + KI K+ D G L E I++ S P+V+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH-PNVL 95
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
L+ + EG ++ V YM DL+ +IR+ N V + Q+ KG+
Sbjct: 96 SLLGI--CLRSEGSPLV--VLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMK 148
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT----LPIKKYTHEILTLWYRAP 182
F +HRDL N ++D K T+K+AD GLAR + T L + + A
Sbjct: 149 FLASKKFVHRDLAARNCMLDEK-FTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMAL 207
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTA 212
E L + ++T D+WS + EL+T+ A
Sbjct: 208 ES-LQTQKFTTKSDVWSFGVLLWELMTRGA 236
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 49/264 (18%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 75
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + Y++ E+M +L Y+R + + + + + Q+ + +
Sbjct: 76 GVCTREPP-----FYIIIEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLE 128
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEILTLW 178
+HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 129 KKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPIK---------- 177
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFRLLG 231
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R G
Sbjct: 178 WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Query: 232 TPNEKVWPGVSSLMNWHEYPQWNP 255
P EKV+ + + W QWNP
Sbjct: 237 CP-EKVYELMRAC--W----QWNP 253
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 29/220 (13%)
Query: 8 KLEK-VGEGTYGKVYRAREKATGKIVA--LKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
KLEK +G G +G+V+ A K+ +K + + L E ++++ L D
Sbjct: 18 KLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE------AFLAEANVMKTLQHD- 70
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
+V+L V + +Y++ E+M L +++S G P+ + Q+ +
Sbjct: 71 KLVKLHAVVT------KEPIYIITEFMAKGSLLDFLKS--DEGSKQPLPKLIDFSAQIAE 122
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYR 180
G+AF +HRDL+ N+L+ ++ KIAD GLAR + +YT + +
Sbjct: 123 GMAFIEQRNYIHRDLRAANILVS-ASLVCKIADFGLAR--VIEDNEYTAREGAKFPIKWT 179
Query: 181 APEVL-LGSTHYSTAVDMWSVACIFAELVTKTAL-FPGDS 218
APE + GS ++ D+WS + E+VT + +PG S
Sbjct: 180 APEAINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPGMS 217
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 38/219 (17%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G+G +G+V+ T + VA+K + P L+E +++ L R +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKL-RHEKLVQLY 79
Query: 71 DVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + +Y+V EYM L +++ + G+ + + + + Q+ G+A+
Sbjct: 80 AVVSEEP------IYIVIEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEILTLW 178
+HRDL+ N+L+ + + K+AD GLAR PIK
Sbjct: 132 RMNYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEXTARQGAKFPIK---------- 180
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG 216
+ APE L ++ D+WS + EL TK + +PG
Sbjct: 181 WTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G+G +G+V+ T + VA+K + P L+E +++ L R +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKL-RHEKLVQLY 79
Query: 71 DVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + +Y+V EYM L +++ + G+ + + + + Q+ G+A+
Sbjct: 80 AVVSEEP------IYIVCEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEVLL 186
+HRDL+ N+L+ + + K+AD GLAR + +YT + + APE L
Sbjct: 132 RMNYVHRDLRAANILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 187 GSTHYSTAVDMWSVACIFAELVTKTAL-FPG 216
++ D+WS + EL TK + +PG
Sbjct: 189 -YGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 55/267 (20%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 88
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY---QLCKGVA 126
V + Y++ E+M +L Y+R + N V L+Y Q+ +
Sbjct: 89 GVCTREPP-----FYIITEFMTYGNLLDYLRECNRQEVNAVV-----LLYMATQISSAME 138
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEIL 175
+ +HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 139 YLEKKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPIK------- 190
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFR 228
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R
Sbjct: 191 ---WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 246
Query: 229 LLGTPNEKVWPGVSSLMNWHEYPQWNP 255
G P EKV+ + + W QWNP
Sbjct: 247 PEGCP-EKVYELMRAC--W----QWNP 266
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 25/208 (12%)
Query: 9 LEKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
++++G G +G V+ K I +++ + E+D + E ++ LS P +
Sbjct: 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED------FIEEAEVMMKLSH-PKL 67
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
V+L V Q + LVFE+M+ L Y+R+ R T+ + +C+G+
Sbjct: 68 VQLYGVCLEQAP-----ICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGM 119
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAP 182
A+ ++HRDL N L+ + +K++D G+ R F L +YT T + + +P
Sbjct: 120 AYLEEACVIHRDLAARNCLVG-ENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFPVKWASP 176
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTK 210
EV + YS+ D+WS + E+ ++
Sbjct: 177 EV-FSFSRYSSKSDVWSFGVLMWEVFSE 203
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 55/267 (20%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 80
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY---QLCKGVA 126
V + Y++ E+M +L Y+R + N V L+Y Q+ +
Sbjct: 81 GVCTREPP-----FYIITEFMTYGNLLDYLRECNRQEVNAVV-----LLYMATQISSAME 130
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEIL 175
+ +HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 131 YLEKKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPIK------- 182
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFR 228
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R
Sbjct: 183 ---WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 238
Query: 229 LLGTPNEKVWPGVSSLMNWHEYPQWNP 255
G P EKV+ + + W QWNP
Sbjct: 239 PEGCP-EKVYELMRAC--W----QWNP 258
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 29/254 (11%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 73
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + Y++ E+M +L Y+R + + + + + Q+ + +
Sbjct: 74 GVCTREPP-----FYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLE 126
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTL-PIKKYTHEILTLWYRAPEVLLGS 188
+HRDL N L+ + +K+AD GL+R T + + + APE L
Sbjct: 127 KKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPES-LAY 184
Query: 189 THYSTAVDMWSVACIFAELVT-KTALFPG--DSELQQLLH----IFRLLGTPNEKVWPGV 241
+S D+W+ + E+ T + +PG S++ +LL + R G P EKV+ +
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCP-EKVYELM 243
Query: 242 SSLMNWHEYPQWNP 255
+ W QWNP
Sbjct: 244 RAC--W----QWNP 251
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G+G +G+V+ T + VA+K + P L+E +++ L R +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKL-RHEKLVQLY 79
Query: 71 DVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + +Y+V EYM L +++ + G+ + + + + Q+ G+A+
Sbjct: 80 AVVSEEP------IYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEVLL 186
+HRDL+ N+L+ + + K+AD GLAR + +YT + + APE L
Sbjct: 132 RMNYVHRDLRAANILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 187 GSTHYSTAVDMWSVACIFAELVTKTAL-FPG 216
++ D+WS + EL TK + +PG
Sbjct: 189 -YGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 55/267 (20%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 76
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY---QLCKGVA 126
V + Y++ E+M +L Y+R + N V L+Y Q+ +
Sbjct: 77 GVCTREPP-----FYIITEFMTYGNLLDYLRECNRQEVNAVV-----LLYMATQISSAME 126
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEIL 175
+ +HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 127 YLEKKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAPAGAKFPIK------- 178
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFR 228
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R
Sbjct: 179 ---WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 234
Query: 229 LLGTPNEKVWPGVSSLMNWHEYPQWNP 255
G P EKV+ + + W QWNP
Sbjct: 235 PEGCP-EKVYELMRAC--W----QWNP 254
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 19/211 (9%)
Query: 10 EKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVV 67
E +G G +G VY + KI K+ D G L E I++ S P+V+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH-PNVL 95
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
L+ + EG ++ V YM DL+ +IR+ N V + Q+ KG+
Sbjct: 96 SLLGI--CLRSEGSPLV--VLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMK 148
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-----AFTLPIKKYTHEILTLWYRA 181
F +HRDL N ++D K T+K+AD GLAR F K ++ W
Sbjct: 149 FLASKKFVHRDLAARNCMLDEK-FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 207
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTA 212
L + ++T D+WS + EL+T+ A
Sbjct: 208 ES--LQTQKFTTKSDVWSFGVLLWELMTRGA 236
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 19/211 (9%)
Query: 10 EKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVV 67
E +G G +G VY + KI K+ D G L E I++ S P+V+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH-PNVL 94
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
L+ + EG ++ V YM DL+ +IR+ N V + Q+ KG+
Sbjct: 95 SLLGI--CLRSEGSPLV--VLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMK 147
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-----AFTLPIKKYTHEILTLWYRA 181
F +HRDL N ++D K T+K+AD GLAR F K ++ W
Sbjct: 148 FLASKKFVHRDLAARNCMLDEK-FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTA 212
L + ++T D+WS + EL+T+ A
Sbjct: 207 ES--LQTQKFTTKSDVWSFGVLLWELMTRGA 235
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 55/267 (20%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 80
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY---QLCKGVA 126
V + Y++ E+M +L Y+R + N V L+Y Q+ +
Sbjct: 81 GVCTREPP-----FYIITEFMTYGNLLDYLRECNRQEVNAVV-----LLYMATQISSAME 130
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEIL 175
+ +HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 131 YLEKKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPIK------- 182
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFR 228
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R
Sbjct: 183 ---WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 238
Query: 229 LLGTPNEKVWPGVSSLMNWHEYPQWNP 255
G P EKV+ + + W QWNP
Sbjct: 239 PEGCP-EKVYELMRAC--W----QWNP 258
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G+G +G+V+ T + VA+K + P L+E +++ L R +V+L
Sbjct: 16 KLGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKL-RHEKLVQLY 70
Query: 71 DVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + +Y+V EYM L +++ + G+ + + + + Q+ G+A+
Sbjct: 71 AVVSEEP------IYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 122
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEVLL 186
+HRDL+ N+L+ + + K+AD GLAR + +YT + + APE L
Sbjct: 123 RMNYVHRDLRAANILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL 179
Query: 187 GSTHYSTAVDMWSVACIFAELVTKTAL-FPG 216
++ D+WS + EL TK + +PG
Sbjct: 180 -YGRFTIKSDVWSFGILLTELTTKGRVPYPG 209
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 55/267 (20%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 77
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY---QLCKGVA 126
V + Y++ E+M +L Y+R + N V L+Y Q+ +
Sbjct: 78 GVCTREPP-----FYIITEFMTYGNLLDYLRECNRQEVNAVV-----LLYMATQISSAME 127
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEIL 175
+ +HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 128 YLEKKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAPAGAKFPIK------- 179
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFR 228
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R
Sbjct: 180 ---WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 235
Query: 229 LLGTPNEKVWPGVSSLMNWHEYPQWNP 255
G P EKV+ + + W QWNP
Sbjct: 236 PEGCP-EKVYELMRAC--W----QWNP 255
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 55/267 (20%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 75
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY---QLCKGVA 126
V + Y++ E+M +L Y+R + N V L+Y Q+ +
Sbjct: 76 GVCTREPP-----FYIITEFMTYGNLLDYLRECNRQEVNAVV-----LLYMATQISSAME 125
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEIL 175
+ +HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 126 YLEKKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPIK------- 177
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFR 228
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R
Sbjct: 178 ---WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 233
Query: 229 LLGTPNEKVWPGVSSLMNWHEYPQWNP 255
G P EKV+ + + W QWNP
Sbjct: 234 PEGCP-EKVYELMRAC--W----QWNP 253
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 36/219 (16%)
Query: 12 VGEGTYGKVYRAREKATG--KIVALKKTRL------HEDDEGVPPTTLREVSILRMLSRD 63
+GEG +G+V +AR K G A+K+ + H D G E+ +L L
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG-------ELEVLCKLGHH 82
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFR------------QTGENIP 110
P+++ L+ E R LYL EY +L ++R R T +
Sbjct: 83 PNIINLLGA-----CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 137
Query: 111 VNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKY 170
+ + +G+ + +HR+L N+L+ + KIAD GL+R + +KK
Sbjct: 138 SQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVA-KIADFGLSRGQEVYVKKT 196
Query: 171 THEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ W L + Y+T D+WS + E+V+
Sbjct: 197 MGRLPVRWMAIES--LNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 25/208 (12%)
Query: 9 LEKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
++++G G +G V+ K I +++ + E+D + E ++ LS P +
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED------FIEEAEVMMKLSH-PKL 64
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
V+L V Q + LVFE+M+ L Y+R+ R T+ + +C+G+
Sbjct: 65 VQLYGVCLEQAP-----ICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGM 116
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAP 182
A+ ++HRDL N L+ + +K++D G+ R F L +YT T + + +P
Sbjct: 117 AYLEEACVIHRDLAARNCLVG-ENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFPVKWASP 173
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTK 210
EV + YS+ D+WS + E+ ++
Sbjct: 174 EV-FSFSRYSSKSDVWSFGVLMWEVFSE 200
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 19/211 (9%)
Query: 10 EKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVV 67
E +G G +G VY + KI K+ D G L E I++ S P+V+
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH-PNVL 99
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
L+ + EG ++ V YM DL+ +IR+ N V + Q+ KG+
Sbjct: 100 SLLGI--CLRSEGSPLV--VLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMK 152
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-----AFTLPIKKYTHEILTLWYRA 181
F +HRDL N ++D K T+K+AD GLAR F K ++ W
Sbjct: 153 FLASKKFVHRDLAARNCMLDEK-FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 211
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTA 212
L + ++T D+WS + EL+T+ A
Sbjct: 212 ES--LQTQKFTTKSDVWSFGVLLWELMTRGA 240
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 24/263 (9%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV-SILRMLSRDPHVVRLM 70
+G G +G+V A K + + EG + R + S L++L H + ++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVN-------TVKSLM---YQ 120
++ K G ++ +V +L Y+RS R E +P T++ L+ +Q
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN--EFVPYKDLYKDFLTLEHLIXYSFQ 152
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTLP--IKKYTHEILTL 177
+ KG+ F +HRDL N+L+ K + +KI D GLAR + P ++K +
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSEKNV-VKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRLLGTP 233
W APE + Y+ D+WS + E+ + A +PG D E + L + P
Sbjct: 212 WM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAP 269
Query: 234 NEKVWPGVSSLMN-WHEYPQWNP 255
+ ++++ WH P P
Sbjct: 270 DYTTPEMYQTMLDCWHGEPSQRP 292
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 10 EKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVV 67
E +G G +G VY + KI K+ D G L E I++ S P+V+
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH-PNVL 113
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
L+ + EG ++ V YM DL+ +IR+ N V + Q+ KG+
Sbjct: 114 SLLGI--CLRSEGSPLV--VLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMK 166
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF----TLPIKKYTHEILTLWYRAP 182
+ +HRDL N ++D K T+K+AD GLAR + T L + + A
Sbjct: 167 YLASKKFVHRDLAARNCMLDEK-FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 225
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTA 212
E L + ++T D+WS + EL+T+ A
Sbjct: 226 ES-LQTQKFTTKSDVWSFGVLLWELMTRGA 254
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G+G +G+V+ T + VA+K + P L+E +++ L R +V+L
Sbjct: 14 KLGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKL-RHEKLVQLY 68
Query: 71 DVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + +Y+V EYM L +++ + G+ + + + + Q+ G+A+
Sbjct: 69 AVVSEEP------IYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 120
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEVLL 186
+HRDL+ N+L+ + + K+AD GLAR + +YT + + APE L
Sbjct: 121 RMNYVHRDLRAANILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL 177
Query: 187 GSTHYSTAVDMWSVACIFAELVTKTAL-FPG 216
++ D+WS + EL TK + +PG
Sbjct: 178 -YGRFTIKSDVWSFGILLTELTTKGRVPYPG 207
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 19/211 (9%)
Query: 10 EKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVV 67
E +G G +G VY + KI K+ D G L E I++ S P+V+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH-PNVL 94
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
L+ + EG ++ V YM DL+ +IR+ N V + Q+ KG+
Sbjct: 95 SLLGI--CLRSEGSPLV--VLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMK 147
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-----AFTLPIKKYTHEILTLWYRA 181
F +HRDL N ++D K T+K+AD GLAR F K ++ W
Sbjct: 148 FLASKKFVHRDLAARNCMLDEK-FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTA 212
L + ++T D+WS + EL+T+ A
Sbjct: 207 ES--LQTQKFTTKSDVWSFGVLLWELMTRGA 235
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 55/267 (20%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 77
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY---QLCKGVA 126
V + Y++ E+M +L Y+R + N V L+Y Q+ +
Sbjct: 78 GVCTREPP-----FYIITEFMTYGNLLDYLRECNRQEVNAVV-----LLYMATQISSAME 127
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEIL 175
+ +HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 128 YLEKKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPIK------- 179
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFR 228
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R
Sbjct: 180 ---WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 235
Query: 229 LLGTPNEKVWPGVSSLMNWHEYPQWNP 255
G P EKV+ + + W QWNP
Sbjct: 236 PEGCP-EKVYELMRAC--W----QWNP 255
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 55/267 (20%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 79
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY---QLCKGVA 126
V + Y++ E+M +L Y+R + N V L+Y Q+ +
Sbjct: 80 GVCTREPP-----FYIITEFMTYGNLLDYLRECNRQEVNAVV-----LLYMATQISSAME 129
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEIL 175
+ +HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 130 YLEKKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPIK------- 181
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFR 228
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R
Sbjct: 182 ---WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 237
Query: 229 LLGTPNEKVWPGVSSLMNWHEYPQWNP 255
G P EKV+ + + W QWNP
Sbjct: 238 PEGCP-EKVYELMRAC--W----QWNP 257
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 19/211 (9%)
Query: 10 EKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVV 67
E +G G +G VY + KI K+ D G L E I++ S P+V+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH-PNVL 92
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
L+ + EG ++ V YM DL+ +IR+ N V + Q+ KG+
Sbjct: 93 SLLGI--CLRSEGSPLV--VLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMK 145
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-----AFTLPIKKYTHEILTLWYRA 181
F +HRDL N ++D K T+K+AD GLAR F K ++ W
Sbjct: 146 FLASKKFVHRDLAARNCMLDEK-FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 204
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTA 212
L + ++T D+WS + EL+T+ A
Sbjct: 205 ES--LQTQKFTTKSDVWSFGVLLWELMTRGA 233
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 10 EKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVV 67
E +G G +G VY + KI K+ D G L E I++ S P+V+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH-PNVL 92
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
L+ + EG ++ V YM DL+ +IR+ N V + Q+ KG+
Sbjct: 93 SLLGI--CLRSEGSPLV--VLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMK 145
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF----TLPIKKYTHEILTLWYRAP 182
+ +HRDL N ++D K T+K+AD GLAR + T L + + A
Sbjct: 146 YLASKKFVHRDLAARNCMLDEK-FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 204
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTA 212
E L + ++T D+WS + EL+T+ A
Sbjct: 205 ES-LQTQKFTTKSDVWSFGVLLWELMTRGA 233
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 10 EKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVV 67
E +G G +G VY + KI K+ D G L E I++ S P+V+
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH-PNVL 86
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
L+ + EG ++ V YM DL+ +IR+ N V + Q+ KG+
Sbjct: 87 SLLGI--CLRSEGSPLV--VLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMK 139
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF----TLPIKKYTHEILTLWYRAP 182
+ +HRDL N ++D K T+K+AD GLAR + T L + + A
Sbjct: 140 YLASKKFVHRDLAARNCMLDEK-FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 198
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTA 212
E L + ++T D+WS + EL+T+ A
Sbjct: 199 ES-LQTQKFTTKSDVWSFGVLLWELMTRGA 227
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 10 EKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVV 67
E +G G +G VY + KI K+ D G L E I++ S P+V+
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH-PNVL 112
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
L+ + EG ++ V YM DL+ +IR+ N V + Q+ KG+
Sbjct: 113 SLLGI--CLRSEGSPLV--VLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMK 165
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF----TLPIKKYTHEILTLWYRAP 182
+ +HRDL N ++D K T+K+AD GLAR + T L + + A
Sbjct: 166 YLASKKFVHRDLAARNCMLDEK-FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 224
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTA 212
E L + ++T D+WS + EL+T+ A
Sbjct: 225 ES-LQTQKFTTKSDVWSFGVLLWELMTRGA 253
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 55/267 (20%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 80
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY---QLCKGVA 126
V + Y++ E+M +L Y+R + N V L+Y Q+ +
Sbjct: 81 GVCTREPP-----FYIITEFMTYGNLLDYLRECNRQEVNAVV-----LLYMATQISSAME 130
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEIL 175
+ +HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 131 YLEKKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTXTAHAGAKFPIK------- 182
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFR 228
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R
Sbjct: 183 ---WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 238
Query: 229 LLGTPNEKVWPGVSSLMNWHEYPQWNP 255
G P EKV+ + + W QWNP
Sbjct: 239 PEGCP-EKVYELMRAC--W----QWNP 258
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 25/208 (12%)
Query: 9 LEKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
++++G G +G V+ K I +++ + E+D + E ++ LS P +
Sbjct: 10 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED------FIEEAEVMMKLSH-PKL 62
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
V+L V Q + LVFE+M+ L Y+R+ R T+ + +C+G+
Sbjct: 63 VQLYGVCLEQAP-----ICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGM 114
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAP 182
A+ ++HRDL N L+ + +K++D G+ R F L +YT T + + +P
Sbjct: 115 AYLEEACVIHRDLAARNCLVG-ENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFPVKWASP 171
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTK 210
EV + YS+ D+WS + E+ ++
Sbjct: 172 EV-FSFSRYSSKSDVWSFGVLMWEVFSE 198
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 10 EKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVV 67
E +G G +G VY + KI K+ D G L E I++ S P+V+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH-PNVL 93
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
L+ + EG ++ V YM DL+ +IR+ N V + Q+ KG+
Sbjct: 94 SLLGI--CLRSEGSPLV--VLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMK 146
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF----TLPIKKYTHEILTLWYRAP 182
+ +HRDL N ++D K T+K+AD GLAR + T L + + A
Sbjct: 147 YLASKKFVHRDLAARNCMLDEK-FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 205
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTA 212
E L + ++T D+WS + EL+T+ A
Sbjct: 206 ES-LQTQKFTTKSDVWSFGVLLWELMTRGA 234
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 16/208 (7%)
Query: 1 MVMDAFEKLEKVGEGTYGKVYRAREK-ATGKIVALKKTRLHEDDEGVPPTTLREVSILRM 59
+V +E + G G +Y A ++ G+ V LK +H D + E L
Sbjct: 77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGL-VHSGDAEAQAMAMAERQFLAE 135
Query: 60 LSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY 119
+ P +V++ + + ++ G V Y+V EY+ K R G+ +PV + +
Sbjct: 136 VVH-PSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK-----RSKGQKLPVAEAIAYLL 189
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY 179
++ +++ H G+++ DLKP N+++ + LK+ DLG I + + T +
Sbjct: 190 EILPALSYLHSIGLVYNDLKPENIMLTEE--QLKLIDLGAVSR----INSFGYLYGTPGF 243
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAEL 207
+APE++ T + A D+++V A L
Sbjct: 244 QAPEIV--RTGPTVATDIYTVGRTLAAL 269
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 55/267 (20%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 77
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY---QLCKGVA 126
V + Y++ E+M +L Y+R + N V L+Y Q+ +
Sbjct: 78 GVCTREPP-----FYIITEFMTYGNLLDYLRECNRQEVNAVV-----LLYMATQISSAME 127
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEIL 175
+ +HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 128 YLEKKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPIK------- 179
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFR 228
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R
Sbjct: 180 ---WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 235
Query: 229 LLGTPNEKVWPGVSSLMNWHEYPQWNP 255
G P EKV+ + + W QWNP
Sbjct: 236 PEGCP-EKVYELMRAC--W----QWNP 255
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 19/211 (9%)
Query: 10 EKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVV 67
E +G G +G VY + KI K+ D G L E I++ S P+V+
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH-PNVL 153
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
L+ + EG ++ V YM DL+ +IR+ N V + Q+ KG+
Sbjct: 154 SLLGI--CLRSEGSPLV--VLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMK 206
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-----AFTLPIKKYTHEILTLWYRA 181
F +HRDL N ++D K T+K+AD GLAR F K ++ W
Sbjct: 207 FLASKKFVHRDLAARNCMLDEK-FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 265
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTA 212
L + ++T D+WS + EL+T+ A
Sbjct: 266 ES--LQTQKFTTKSDVWSFGVLLWELMTRGA 294
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 10 EKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVV 67
E +G G +G VY + KI K+ D G L E I++ S P+V+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH-PNVL 94
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
L+ + EG ++ V YM DL+ +IR+ N V + Q+ KG+
Sbjct: 95 SLLGI--CLRSEGSPLV--VLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMK 147
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF----TLPIKKYTHEILTLWYRAP 182
+ +HRDL N ++D K T+K+AD GLAR + T L + + A
Sbjct: 148 YLASKKFVHRDLAARNCMLDEK-FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTA 212
E L + ++T D+WS + EL+T+ A
Sbjct: 207 ES-LQTQKFTTKSDVWSFGVLLWELMTRGA 235
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 29/220 (13%)
Query: 8 KLEK-VGEGTYGKVYRAREKATGKIVA--LKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
KLEK +G G +G+V+ A K+ +K + + L E ++++ L D
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE------AFLAEANVMKTLQHD- 243
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
+V+L V + +Y++ E+M L +++S G P+ + Q+ +
Sbjct: 244 KLVKLHAVVT------KEPIYIITEFMAKGSLLDFLKS--DEGSKQPLPKLIDFSAQIAE 295
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYR 180
G+AF +HRDL+ N+L+ ++ KIAD GLAR + +YT + +
Sbjct: 296 GMAFIEQRNYIHRDLRAANILVS-ASLVCKIADFGLAR--VIEDNEYTAREGAKFPIKWT 352
Query: 181 APEVL-LGSTHYSTAVDMWSVACIFAELVTKTAL-FPGDS 218
APE + GS ++ D+WS + E+VT + +PG S
Sbjct: 353 APEAINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPGMS 390
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 10 EKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVV 67
E +G G +G VY + KI K+ D G L E I++ S P+V+
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH-PNVL 91
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
L+ + EG ++ V YM DL+ +IR+ N V + Q+ KG+
Sbjct: 92 SLLGI--CLRSEGSPLV--VLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMK 144
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF----TLPIKKYTHEILTLWYRAP 182
+ +HRDL N ++D K T+K+AD GLAR + T L + + A
Sbjct: 145 YLASKKFVHRDLAARNCMLDEK-FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 203
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTA 212
E L + ++T D+WS + EL+T+ A
Sbjct: 204 ES-LQTQKFTTKSDVWSFGVLLWELMTRGA 232
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 119/268 (44%), Gaps = 55/268 (20%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 75
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY---QLCKGVA 126
V + Y++ E+M +L Y+R + N V L+Y Q+ +
Sbjct: 76 GVCTREPP-----FYIITEFMTYGNLLDYLRECNRQEVNAVV-----LLYMATQISSAME 125
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEIL 175
+ +HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 126 YLEKKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPIK------- 177
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFR 228
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R
Sbjct: 178 ---WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 233
Query: 229 LLGTPNEKVWPGVSSLMNWHEYPQWNPQ 256
G P EKV+ + + W QWNP
Sbjct: 234 PEGCP-EKVYELMRAC--W----QWNPS 254
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 24/263 (9%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV-SILRMLSRDPHVVRLM 70
+G G +G+V A K + + EG + R + S L++L H + ++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVN-------TVKSLM---YQ 120
++ K G ++ +V +L Y+RS R E +P T++ L+ +Q
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN--EFVPYKDLYKDFLTLEHLICYSFQ 152
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTLP--IKKYTHEILTL 177
+ KG+ F +HRDL N+L+ K + +KI D GLAR + P ++K +
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRLLGTP 233
W APE + Y+ D+WS + E+ + A +PG D E + L + P
Sbjct: 212 WM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 269
Query: 234 NEKVWPGVSSLMN-WHEYPQWNP 255
+ ++++ WH P P
Sbjct: 270 DYTTPEMYQTMLDCWHGEPSQRP 292
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 10 EKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVV 67
E +G G +G VY + KI K+ D G L E I++ S P+V+
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH-PNVL 89
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
L+ + EG ++ V YM DL+ +IR+ N V + Q+ KG+
Sbjct: 90 SLLGI--CLRSEGSPLV--VLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMK 142
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF----TLPIKKYTHEILTLWYRAP 182
+ +HRDL N ++D K T+K+AD GLAR + T L + + A
Sbjct: 143 YLASKKFVHRDLAARNCMLDEK-FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 201
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTA 212
E L + ++T D+WS + EL+T+ A
Sbjct: 202 ES-LQTQKFTTKSDVWSFGVLLWELMTRGA 230
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 49/264 (18%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 75
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + Y++ E+M +L Y+R + + + + + Q+ + +
Sbjct: 76 GVCTREPP-----FYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLE 128
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEILTLW 178
+HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 129 KKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPIK---------- 177
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFRLLG 231
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R G
Sbjct: 178 WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Query: 232 TPNEKVWPGVSSLMNWHEYPQWNP 255
P EKV+ + + W QWNP
Sbjct: 237 CP-EKVYELMRAC--W----QWNP 253
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 49/264 (18%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 80
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + Y++ E+M +L Y+R + + + + + Q+ + +
Sbjct: 81 GVCTREPP-----FYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLE 133
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEILTLW 178
+HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 134 KKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPIK---------- 182
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFRLLG 231
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R G
Sbjct: 183 WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 241
Query: 232 TPNEKVWPGVSSLMNWHEYPQWNP 255
P EKV+ + + W QWNP
Sbjct: 242 CP-EKVYELMRAC--W----QWNP 258
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 10 EKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVV 67
E +G G +G VY + KI K+ D G L E I++ S P+V+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH-PNVL 94
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
L+ + EG ++ V YM DL+ +IR+ N V + Q+ KG+
Sbjct: 95 SLLGI--CLRSEGSPLV--VLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMK 147
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF----TLPIKKYTHEILTLWYRAP 182
+ +HRDL N ++D K T+K+AD GLAR + T L + + A
Sbjct: 148 YLASKKFVHRDLAARNCMLDEK-FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTKTA 212
E L + ++T D+WS + EL+T+ A
Sbjct: 207 ES-LQTQKFTTKSDVWSFGVLLWELMTRGA 235
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G+G +G+V+ T + VA+K + P L+E +++ L R +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKL-RHEKLVQLY 79
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + +Y+V EYM L +++ + G+ + + + + Q+ G+A+
Sbjct: 80 AVVSEEP------IYIVTEYMSKGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEVLL 186
+HRDL+ N+L+ + + K+AD GLAR + +YT + + APE L
Sbjct: 132 RMNYVHRDLRAANILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 187 GSTHYSTAVDMWSVACIFAELVTKTAL-FPG 216
++ D+WS + EL TK + +PG
Sbjct: 189 -YGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 85/196 (43%), Gaps = 23/196 (11%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS 61
V + F K+G G++G++Y T + VA+K E+ + P L E I R+L
Sbjct: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK----LENVKTKHPQLLYESKIYRILQ 60
Query: 62 RDPHV--VRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY 119
+ VR V+ N LV + + L+ F + + TV L
Sbjct: 61 GGTGIPNVRWFGVEGDYN-------VLVMDLLGPSLEDL---FNFCSRKLSLKTVLMLAD 110
Query: 120 QLCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTL 177
Q+ V F H LHRD+KP N LM R+ + I D GLA+ + TH+ +
Sbjct: 111 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR---DTSTHQHIP- 166
Query: 178 WYRAPEVLLGSTHYST 193
YR + L G+ Y++
Sbjct: 167 -YRENKNLTGTARYAS 181
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D FE L+ +G G + +V + K TG++ A+K + + + RE + +
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEY-MDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+ +L Q +N LYLV EY + DL + F GE IP + + ++
Sbjct: 121 RWITQLHFAFQDEN-----YLYLVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIV 172
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLG 158
+ H G +HRD+KP N+L+DR +++AD G
Sbjct: 173 MAIDSVHRLGYVHRDIKPDNILLDR-CGHIRLADFG 207
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 110/267 (41%), Gaps = 28/267 (10%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV-SILRMLSRDPHVVRLM 70
+G G +G+V A K + + EG + R + S L++L H + ++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY----------- 119
++ K G ++ +V +L Y+RS R E +P +Y
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN--EFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 120 ---QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTLP--IKKYTHE 173
Q+ KG+ F +HRDL N+L+ K + +KI D GLAR + P ++K
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPDYVRKGDAR 211
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRL 229
+ W APE + Y+ D+WS + E+ + A +PG D E + L
Sbjct: 212 LPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 269
Query: 230 LGTPNEKVWPGVSSLMN-WHEYPQWNP 255
+ P+ ++++ WH P P
Sbjct: 270 MRAPDYTTPEMYQTMLDCWHGEPSQRP 296
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 49/264 (18%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 75
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + Y++ E+M +L Y+R + + + + + Q+ + +
Sbjct: 76 GVCTREPP-----FYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLE 128
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEILTLW 178
+HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 129 KKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPIK---------- 177
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFRLLG 231
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R G
Sbjct: 178 WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Query: 232 TPNEKVWPGVSSLMNWHEYPQWNP 255
P EKV+ + + W QWNP
Sbjct: 237 CP-EKVYELMRAC--W----QWNP 253
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G+G +G+V+ T + VA+K + P L+E +++ + R +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKI-RHEKLVQLY 79
Query: 71 DVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + +Y+V EYM L +++ + G+ + + + + Q+ G+A+
Sbjct: 80 AVVSEEP------IYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEVLL 186
+HRDL+ N+L+ + + K+AD GLAR + +YT + + APE L
Sbjct: 132 RMNYVHRDLRAANILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 187 GSTHYSTAVDMWSVACIFAELVTKTAL-FPG 216
++ D+WS + EL TK + +PG
Sbjct: 189 -YGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 110/267 (41%), Gaps = 28/267 (10%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV-SILRMLSRDPHVVRLM 70
+G G +G+V A K + + EG + R + S L++L H + ++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY----------- 119
++ K G ++ +V +L Y+RS R E +P +Y
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN--EFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 120 ---QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTLP--IKKYTHE 173
Q+ KG+ F +HRDL N+L+ K + +KI D GLAR + P ++K
Sbjct: 190 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPDYVRKGDAR 248
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRL 229
+ W APE + Y+ D+WS + E+ + A +PG D E + L
Sbjct: 249 LPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 306
Query: 230 LGTPNEKVWPGVSSLMN-WHEYPQWNP 255
+ P+ ++++ WH P P
Sbjct: 307 MRAPDYTTPEMYQTMLDCWHGEPSQRP 333
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 110/267 (41%), Gaps = 28/267 (10%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV-SILRMLSRDPHVVRLM 70
+G G +G+V A K + + EG + R + S L++L H + ++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY----------- 119
++ K G ++ +V +L Y+RS R E +P +Y
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN--EFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 120 ---QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTLP--IKKYTHE 173
Q+ KG+ F +HRDL N+L+ K + +KI D GLAR + P ++K
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPDXVRKGDAR 211
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRL 229
+ W APE + Y+ D+WS + E+ + A +PG D E + L
Sbjct: 212 LPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 269
Query: 230 LGTPNEKVWPGVSSLMN-WHEYPQWNP 255
+ P+ ++++ WH P P
Sbjct: 270 MRAPDYTTPEMYQTMLDCWHGEPSQRP 296
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 108/267 (40%), Gaps = 28/267 (10%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV-SILRMLSRDPHVVRLM 70
+G G +G+V A K + + EG + R + S L++L H + ++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY----------- 119
++ K G ++ +V +L Y+RS R E +P +Y
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN--EFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 120 ---QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTL---PIKKYTHE 173
Q+ KG+ F +HRDL N+L+ K + +KI D GLAR ++K
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIXKDPDXVRKGDAR 211
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRL 229
+ W APE + Y+ D+WS + E+ + A +PG D E + L
Sbjct: 212 LPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 269
Query: 230 LGTPNEKVWPGVSSLMN-WHEYPQWNP 255
+ P+ ++++ WH P P
Sbjct: 270 MRAPDYTTPEMYQTMLDCWHGEPSQRP 296
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 36/219 (16%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 94
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + Y+V EYM +L Y+R + E + + + Q+ + +
Sbjct: 95 GVCTLEPP-----FYIVTEYMPYGNLLDYLRECNR--EEVTAVVLLYMATQISSAMEYLE 147
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEILTLW 178
+HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 148 KKNFIHRDLAARNCLVGENHV-VKVADFGLSRLMTGDTYTAHAGAKFPIK---------- 196
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG 216
+ APE L +T +S D+W+ + E+ T + +PG
Sbjct: 197 WTAPESLAYNT-FSIKSDVWAFGVLLWEIATYGMSPYPG 234
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 108/267 (40%), Gaps = 28/267 (10%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV-SILRMLSRDPHVVRLM 70
+G G +G+V A K + + EG + R + S L++L H + ++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY----------- 119
++ K G ++ +V +L Y+RS R E +P +Y
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN--EFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 120 ---QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTL---PIKKYTHE 173
Q+ KG+ F +HRDL N+L+ K + +KI D GLAR ++K
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIXKDPDXVRKGDAR 202
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRL 229
+ W APE + Y+ D+WS + E+ + A +PG D E + L
Sbjct: 203 LPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 260
Query: 230 LGTPNEKVWPGVSSLMN-WHEYPQWNP 255
+ P+ ++++ WH P P
Sbjct: 261 MRAPDYTTPEMYQTMLDCWHGEPSQRP 287
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G+G +G+V+ T + VA+K + P L+E +++ L R +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKL-RHEKLVQLY 79
Query: 71 DVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + +Y+V EYM L +++ + G+ + + + + Q+ G+A+
Sbjct: 80 AVVSEEP------IYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEVLL 186
+HRDL N+L+ + + K+AD GLAR + +YT + + APE L
Sbjct: 132 RMNYVHRDLAAANILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 187 GSTHYSTAVDMWSVACIFAELVTKTAL-FPG 216
++ D+WS + EL TK + +PG
Sbjct: 189 -YGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 117/288 (40%), Gaps = 47/288 (16%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALK----KTRLHEDDEGVPPTTLREVSILRMLS 61
F L+ +G+G++GKV AR KA A+K K L + +E + E ++L
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEK---HIMSERNVLLKNV 96
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQ 120
+ P +V L Q +K LY V +Y++ +L +++ R E + +
Sbjct: 97 KHPFLVGLHFSFQTADK-----LYFVLDYINGGELFYHLQRERCFLEP----RARFYAAE 147
Query: 121 LCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYR 180
+ + + H I++RDLKP N+L+D + + + D GL + + T Y
Sbjct: 148 IASALGYLHSLNIVYRDLKPENILLDSQGHIV-LTDFGLCKENIEHNSTTSTFCGTPEYL 206
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPG 240
APEV L Y VD W + + E++ F + + +I
Sbjct: 207 APEV-LHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN------------ 253
Query: 241 VSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAK 288
P L PN+ LLE +LQ D +KR+ AK
Sbjct: 254 -------------KPLQLK---PNITNSARHLLEGLLQKDRTKRLGAK 285
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 110/267 (41%), Gaps = 28/267 (10%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV-SILRMLSRDPHVVRLM 70
+G G +G+V A K + + EG + R + S L++L H + ++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY----------- 119
++ K G ++ +V +L Y+RS R E +P +Y
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN--EFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 120 ---QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTLP--IKKYTHE 173
Q+ KG+ F +HRDL N+L+ K + +KI D GLAR + P ++K
Sbjct: 155 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPDYVRKGDAR 213
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRL 229
+ W APE + Y+ D+WS + E+ + A +PG D E + L
Sbjct: 214 LPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 271
Query: 230 LGTPNEKVWPGVSSLMN-WHEYPQWNP 255
+ P+ ++++ WH P P
Sbjct: 272 MRAPDYTTPEMYQTMLDCWHGEPSQRP 298
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G+G +G+V+ T + VA+K + P L+E +++ L R +V+L
Sbjct: 192 KLGQGCFGEVWMGTWNGTTR-VAIKTLK---PGNMSPEAFLQEAQVMKKL-RHEKLVQLY 246
Query: 71 DVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + +Y+V EYM L +++ + G+ + + + + Q+ G+A+
Sbjct: 247 AVVSEEP------IYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 298
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEVLL 186
+HRDL+ N+L+ + + K+AD GL R + +YT + + APE L
Sbjct: 299 RMNYVHRDLRAANILVG-ENLVCKVADFGLGR--LIEDNEYTARQGAKFPIKWTAPEAAL 355
Query: 187 GSTHYSTAVDMWSVACIFAELVTKTAL-FPG 216
++ D+WS + EL TK + +PG
Sbjct: 356 -YGRFTIKSDVWSFGILLTELTTKGRVPYPG 385
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 26/265 (9%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV-SILRMLSRDPHVVRLM 70
+G G +G+V A K + + EG + R + S L++L H + ++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVN---------TVKSLM--- 118
++ K G ++ +V +L Y+RS R E +P T++ L+
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN--EFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTL---PIKKYTHEIL 175
+Q+ KG+ F +HRDL N+L+ K + +KI D GLAR ++K +
Sbjct: 155 FQVAKGMEFLASRKXIHRDLAARNILLSEKNV-VKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRLLG 231
W APE + Y+ D+WS + E+ + A +PG D E + L +
Sbjct: 214 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 232 TPNEKVWPGVSSLMN-WHEYPQWNP 255
P+ ++++ WH P P
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRP 296
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 49/264 (18%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G +G+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 73
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + Y++ E+M +L Y+R + + + + + Q+ + +
Sbjct: 74 GVCTREPP-----FYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLE 126
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEILTLW 178
+HRDL N L+ + +K+AD GL+R T PIK
Sbjct: 127 KKNFIHRDLAARNCLVGENHL-VKVADFGLSRLMTGDTXTAHAGAKFPIK---------- 175
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG--DSELQQLLH----IFRLLG 231
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R G
Sbjct: 176 WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEG 234
Query: 232 TPNEKVWPGVSSLMNWHEYPQWNP 255
P EKV+ + + W QWNP
Sbjct: 235 CP-EKVYELMRAC--W----QWNP 251
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 134/358 (37%), Gaps = 97/358 (27%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
FE ++ +G G +G V+ A+ K A+K+ RL + E +REV L L P
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRL-PNRELAREKVMREVKALAKLEH-PG 65
Query: 66 VVRLMD----------------------------------------------------VK 73
+VR + V
Sbjct: 66 IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVG 125
Query: 74 QGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGI 133
Q Q + LY+ + + K + R + E+ + Q+ + V F H G+
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGL 185
Query: 134 LHRDLKPHNLLMDRKTMTLKIADLGLARAFT---------LPIKKY-TH--EILTLWYRA 181
+HRDLKP N+ + +K+ D GL A P+ Y TH ++ T Y +
Sbjct: 186 MHRDLKPSNIFFTMDDV-VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMS 244
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
PE + G+ +YS VD++S+ I EL+ F E +++ R L P
Sbjct: 245 PEQIHGN-NYSHKVDIFSLGLILFELLYS---FSTQMERVRIITDVRNLKFP-------- 292
Query: 242 SSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 299
L+ +YPQ + +++ ML P++R A +E+ F++L
Sbjct: 293 --LLFTQKYPQEHM----------------MVQDMLSPSPTERPEATDIIENAIFENL 332
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 38/219 (17%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G+G +G+V+ T + VA+K + P L+E +++ L R +V+L
Sbjct: 15 KLGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKL-RHEKLVQLY 69
Query: 71 DVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + + +V EYM L +++ +TG+ + + + + Q+ G+A+
Sbjct: 70 AVVSEEP------IXIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE 121
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEILTLW 178
+HRDL+ N+L+ + + K+AD GLAR PIK
Sbjct: 122 RMNYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEXTARQGAKFPIK---------- 170
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG 216
+ APE L ++ D+WS + EL TK + +PG
Sbjct: 171 WTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPG 208
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 11 KVGEGTYGKVYRAR----EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
++GEG +GKV+ A KI+ KT L + + RE +L L + H+
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKT-LKDASDNARKDFHREAELLTNLQHE-HI 77
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTG-----ENIPVNTVKSLMY- 119
V+ G EG L +VFEYM DL K++R+ N P +S M
Sbjct: 78 VKFY----GVCVEGDP-LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 120 ---QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEI 174
Q+ G+ + +HRDL N L+ + + +KI D G++R T + H +
Sbjct: 133 IAQQIAAGMVYLASQHFVHRDLATRNCLVG-ENLLVKIGDFGMSRDVYSTDYYRVGGHTM 191
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
L + + PE ++ ++T D+WS+ + E+ T
Sbjct: 192 LPIRWMPPESIM-YRKFTTESDVWSLGVVLWEIFT 225
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 39/242 (16%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRM-LS 61
+D + LE +G G YG VY+ + VA+K + E +I R+ L
Sbjct: 12 LDNLKLLELIGRGRYGAVYKG--SLDERPVAVKVFSFANRQ-----NFINEKNIYRVPLM 64
Query: 62 RDPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQ 120
++ R + + +GR LV EY + L KY+ V++ + L +
Sbjct: 65 EHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDW----VSSCR-LAHS 119
Query: 121 LCKGVAFCHGH---------GILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----LP 166
+ +G+A+ H I HRDL N+L+ + T I+D GL+ T P
Sbjct: 120 VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV-KNDGTCVISDFGLSMRLTGNRLVRP 178
Query: 167 IKK---YTHEILTLWYRAPEVLLGSTHYSTA------VDMWSVACIFAELVTK-TALFPG 216
++ E+ T+ Y APEVL G+ + VDM+++ I+ E+ + T LFPG
Sbjct: 179 GEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG 238
Query: 217 DS 218
+S
Sbjct: 239 ES 240
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 33/215 (15%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M + L+ +G+G +G V + G VA+K + ++ L E S++ L R
Sbjct: 11 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIK----NDATAQAFLAEASVMTQL-R 63
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
++V+L+ V E + LY+V EYM L Y+RS ++ + + + +
Sbjct: 64 HSNLVQLLGVIV----EEKGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDV 117
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-------LPIKKYTHEI 174
C+ + + G+ +HRDL N+L+ + K++D GL + + LP+K
Sbjct: 118 CEAMEYLEGNNFVHRDLAARNVLVSEDNVA-KVSDFGLTKEASSTQDTGKLPVK------ 170
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ APE L + +ST D+WS + E+ +
Sbjct: 171 ----WTAPEALREAA-FSTKSDVWSFGILLWEIYS 200
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKA-----TGKIVALKKTRLHEDDEGVPPTTLREVSILR 58
+ E + +GEG +G+V++AR +VA+K + E + RE +++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLK-EEASADMQADFQREAALMA 105
Query: 59 MLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFR-------------- 103
+P++V+L+ G G+ + L+FEYM DL +++RS
Sbjct: 106 EFD-NPNIVKLL----GVCAVGKPMC-LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLST 159
Query: 104 QTGENIPVNTVKSLMYQLC------KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADL 157
+ + P S QLC G+A+ +HRDL N L+ + M +KIAD
Sbjct: 160 RARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG-ENMVVKIADF 218
Query: 158 GLARAFTLP--IKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
GL+R K ++ + + + PE + Y+T D+W+ + E+ +
Sbjct: 219 GLSRNIYSADYYKADGNDAIPIRWMPPESIF-YNRYTTESDVWAYGVVLWEIFS 271
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 36/222 (16%)
Query: 11 KVGEGTYGKVYRA--------REKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
++GEG +GKV+ A ++K + ALK L + RE +L L
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKD-----FQREAELLTNLQH 76
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSF------------RQTGENI 109
+ H+V+ V + L +VFEYM DL K++R+ RQ +
Sbjct: 77 E-HIVKFYGVCGDGDP-----LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 130
Query: 110 PVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPI 167
++ + + Q+ G+ + +HRDL N L+ + +KI D G++R T
Sbjct: 131 GLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG-ANLLVKIGDFGMSRDVYSTDYY 189
Query: 168 KKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ H +L + + PE ++ ++T D+WS I E+ T
Sbjct: 190 RVGGHTMLPIRWMPPESIM-YRKFTTESDVWSFGVILWEIFT 230
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 109/267 (40%), Gaps = 28/267 (10%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV-SILRMLSRDPHVVRLM 70
+G G +G+V A K + + EG + R + S L++L H + ++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY----------- 119
++ K G ++ + +L Y+RS R E +P +Y
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN--EFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 120 ---QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTLP--IKKYTHE 173
Q+ KG+ F +HRDL N+L+ K + +KI D GLAR + P ++K
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPDYVRKGDAR 202
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRL 229
+ W APE + Y+ D+WS + E+ + A +PG D E + L
Sbjct: 203 LPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 260
Query: 230 LGTPNEKVWPGVSSLMN-WHEYPQWNP 255
+ P+ ++++ WH P P
Sbjct: 261 MRAPDYTTPEMYQTMLDCWHGEPSQRP 287
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 55/267 (20%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 279
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY---QLCKGVA 126
V + Y++ E+M +L Y+R + N V L+Y Q+ +
Sbjct: 280 GVCTRE-----PPFYIITEFMTYGNLLDYLRECNRQEVNAVV-----LLYMATQISSAME 329
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEIL 175
+ +HR+L N L+ + +K+AD GL+R T PIK
Sbjct: 330 YLEKKNFIHRNLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPIK------- 381
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFR 228
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R
Sbjct: 382 ---WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 437
Query: 229 LLGTPNEKVWPGVSSLMNWHEYPQWNP 255
G P EKV+ + + W QWNP
Sbjct: 438 PEGCP-EKVYELMRAC--W----QWNP 457
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 33/215 (15%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M + L+ +G+G +G V + G VA+K + ++ L E S++ L R
Sbjct: 20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIK----NDATAQAFLAEASVMTQL-R 72
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
++V+L+ G E + LY+V EYM L Y+RS ++ + + + +
Sbjct: 73 HSNLVQLL----GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDV 126
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-------LPIKKYTHEI 174
C+ + + G+ +HRDL N+L+ + K++D GL + + LP+K
Sbjct: 127 CEAMEYLEGNNFVHRDLAARNVLVSEDNVA-KVSDFGLTKEASSTQDTGKLPVK------ 179
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ APE L +ST D+WS + E+ +
Sbjct: 180 ----WTAPEALR-EKKFSTKSDVWSFGILLWEIYS 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 33/215 (15%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M + L+ +G+G +G V + G VA+K + ++ L E S++ L R
Sbjct: 5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIK----NDATAQAFLAEASVMTQL-R 57
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
++V+L+ G E + LY+V EYM L Y+RS ++ + + + +
Sbjct: 58 HSNLVQLL----GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDV 111
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-------LPIKKYTHEI 174
C+ + + G+ +HRDL N+L+ + K++D GL + + LP+K
Sbjct: 112 CEAMEYLEGNNFVHRDLAARNVLVSEDNVA-KVSDFGLTKEASSTQDTGKLPVK------ 164
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ APE L +ST D+WS + E+ +
Sbjct: 165 ----WTAPEALR-EKKFSTKSDVWSFGILLWEIYS 194
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 47/231 (20%)
Query: 12 VGEGTYGKVYRA-----REKATGKIVALKKTRLHEDDEGVPPTTLR----EVSILRMLSR 62
+GEG +GKV +A + +A VA+K + E P+ LR E ++L+ ++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-----ENASPSELRDLLSEFNVLKQVNH 85
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGEN------------- 108
PHV++L +++G L L+ EY L+ ++R R+ G
Sbjct: 86 -PHVIKLYGA---CSQDG--PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 109 -------IPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR 161
+ + + S +Q+ +G+ + ++HRDL N+L+ + +KI+D GL+R
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILV-AEGRKMKISDFGLSR 198
Query: 162 AF---TLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+K+ I W A E L Y+T D+WS + E+VT
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWM-AIESLFDHI-YTTQSDVWSFGVLLWEIVT 247
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 35/257 (13%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 321
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY---QLCKGVA 126
V + Y++ E+M +L Y+R + N V L+Y Q+ +
Sbjct: 322 GVCTRE-----PPFYIITEFMTYGNLLDYLRECNRQEVNAVV-----LLYMATQISSAME 371
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPI-KKYTHEILTLWYRAPEVL 185
+ +HR+L N L+ + +K+AD GL+R T + + + APE
Sbjct: 372 YLEKKNFIHRNLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES- 429
Query: 186 LGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFRLLGTPNEKVW 238
L +S D+W+ + E+ T + +PG S++ +LL + R G P EKV+
Sbjct: 430 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP-EKVY 488
Query: 239 PGVSSLMNWHEYPQWNP 255
+ + W QWNP
Sbjct: 489 ELMRAC--W----QWNP 499
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 109/267 (40%), Gaps = 28/267 (10%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV-SILRMLSRDPHVVRLM 70
+G G +G+V A K + + EG + R + S L++L H + ++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY----------- 119
++ K G ++ + +L Y+RS R E +P +Y
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN--EFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 120 ---QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTLP--IKKYTHE 173
Q+ KG+ F +HRDL N+L+ K + +KI D GLAR + P ++K
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPDYVRKGDAR 202
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRL 229
+ W APE + Y+ D+WS + E+ + A +PG D E + L
Sbjct: 203 LPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 260
Query: 230 LGTPNEKVWPGVSSLMN-WHEYPQWNP 255
+ P+ ++++ WH P P
Sbjct: 261 MRAPDYTTPEMYQTMLDCWHGEPSQRP 287
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 107/267 (40%), Gaps = 28/267 (10%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV-SILRMLSRDPHVVRLM 70
+G G +G+V A K + + EG + R + S L++L H + ++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY----------- 119
++ K G ++ + +L Y+RS R E +P +Y
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN--EFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 120 ---QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTL---PIKKYTHE 173
Q+ KG+ F +HRDL N+L+ K + +KI D GLAR ++K
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIXKDPDXVRKGDAR 202
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRL 229
+ W APE + Y+ D+WS + E+ + A +PG D E + L
Sbjct: 203 LPLKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 260
Query: 230 LGTPNEKVWPGVSSLMN-WHEYPQWNP 255
+ P+ ++++ WH P P
Sbjct: 261 MRAPDYTTPEMYQTMLDCWHGEPSQRP 287
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 76
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
PHV RL+ + + + L+ + M L Y+R + +NI + + Q+
Sbjct: 77 NPHVCRLLGICL------TSTVQLIMQLMPFGXLLDYVREHK---DNIGSQYLLNWCVQI 127
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWY 179
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 128 AKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 187 MALESILHRI-YTHQSDVWSYGVTVWELMT 215
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 75
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
PHV RL+ + + T L +D Y+R + +NI + + Q+
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGXLLD-----YVREHK---DNIGSQYLLNWCVQIA 127
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYR 180
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 187 ALESILHRI-YTHQSDVWSYGVTVWELMT 214
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 49/265 (18%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
K+G G YG+VY K VA+K L ED V L+E ++++ + + P++V+L+
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEV-EEFLKEAAVMKEI-KHPNLVQLL 282
Query: 71 DVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
V + Y++ E+M +L Y+R + + + + + Q+ + +
Sbjct: 283 GVCTRE-----PPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLE 335
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-----------LPIKKYTHEILTLW 178
+HR+L N L+ + +K+AD GL+R T PIK
Sbjct: 336 KKNFIHRNLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPIK---------- 384
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGD--SELQQLLH----IFRLLG 231
+ APE L +S D+W+ + E+ T + +PG S++ +LL + R G
Sbjct: 385 WTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 443
Query: 232 TPNEKVWPGVSSLMNWHEYPQWNPQ 256
P EKV+ + + W QWNP
Sbjct: 444 CP-EKVYELMRAC--W----QWNPS 461
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 75
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQL 121
PHV RL+ + + + L+ + M L Y+R + +NI + + Q+
Sbjct: 76 NPHVCRLLGICL------TSTVQLIMQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQI 126
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWY 179
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 127 AKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 186 MALESILHRI-YTHQSDVWSYGVTVWELMT 214
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 114 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 173
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 216
Query: 174 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 228
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 217 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 271
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 77
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQL 121
PHV RL+ + + + L+ + M L Y+R + +NI + + Q+
Sbjct: 78 NPHVCRLLGICL------TSTVQLIMQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQI 128
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWY 179
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 129 AKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 188 MALESILHRI-YTHQSDVWSYGVTVWELMT 216
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 76
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQL 121
PHV RL+ + + + L+ + M L Y+R + +NI + + Q+
Sbjct: 77 NPHVCRLLGICL------TSTVQLIMQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQI 127
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWY 179
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 128 AKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 187 MALESILHRI-YTHQSDVWSYGVTVWELMT 215
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 79
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQL 121
PHV RL+ + + + L+ + M L Y+R + +NI + + Q+
Sbjct: 80 NPHVCRLLGICL------TSTVQLIMQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQI 130
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWY 179
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 131 AKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 189
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 190 MALESILHRI-YTHQSDVWSYGVTVWELMT 218
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 78
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQL 121
PHV RL+ + + + L+ + M L Y+R + +NI + + Q+
Sbjct: 79 NPHVCRLLGICL------TSTVQLIMQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQI 129
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWY 179
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 130 AKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 189 MALESILHRI-YTHQSDVWSYGVTVWELMT 217
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 33/215 (15%)
Query: 3 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
M + L+ +G+G +G V + G VA+K + ++ L E S++ L R
Sbjct: 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIK----NDATAQAFLAEASVMTQL-R 244
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQL 121
++V+L+ G E + LY+V EYM L Y+RS ++ + + + +
Sbjct: 245 HSNLVQLL----GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDV 298
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-------LPIKKYTHEI 174
C+ + + G+ +HRDL N+L+ + K++D GL + + LP+K
Sbjct: 299 CEAMEYLEGNNFVHRDLAARNVLVSEDNVA-KVSDFGLTKEASSTQDTGKLPVK------ 351
Query: 175 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ APE L +ST D+WS + E+ +
Sbjct: 352 ----WTAPEALR-EKKFSTKSDVWSFGILLWEIYS 381
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 6/154 (3%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
F +LEK+G G +G V++ ++ G I A+K+++ LREV +L + H
Sbjct: 11 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 70
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
VVR + + + EY + L I + +K L+ Q+ +G
Sbjct: 71 VVRYFSAWAEDDH-----MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLG 158
+ + H ++H D+KP N+ + R ++ ++ G
Sbjct: 126 LRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEG 159
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 177
+ Q+ G + H + ++HRDLK NL ++ + + +KI D GLA ++ T
Sbjct: 123 LRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKTLCGTP 181
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 237
Y APEVL H S VD+WS+ CI L+ F + L I + NE
Sbjct: 182 NYIAPEVLSKKGH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK-----NEYS 235
Query: 238 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P NP + + L+++MLQ DP+ R + + + +F
Sbjct: 236 IPK-----------HINPVAAS------------LIQKMLQTDPTARPTINELLNDEFF 271
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 177
+ Q+ G + H + ++HRDLK NL ++ + + +KI D GLA ++ T
Sbjct: 127 LRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKTLCGTP 185
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 237
Y APEVL H S VD+WS+ CI L+ F + L I + NE
Sbjct: 186 NYIAPEVLSKKGH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK-----NEYS 239
Query: 238 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P NP + + L+++MLQ DP+ R + + + +F
Sbjct: 240 IPK-----------HINPVAAS------------LIQKMLQTDPTARPTINELLNDEFF 275
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 6/154 (3%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
F +LEK+G G +G V++ ++ G I A+K+++ LREV +L + H
Sbjct: 11 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 70
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
VVR + + + EY + L I + +K L+ Q+ +G
Sbjct: 71 VVRYFSAWAEDDH-----MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLG 158
+ + H ++H D+KP N+ + R ++ ++ G
Sbjct: 126 LRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEG 159
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 47/231 (20%)
Query: 12 VGEGTYGKVYRA-----REKATGKIVALKKTRLHEDDEGVPPTTLR----EVSILRMLSR 62
+GEG +GKV +A + +A VA+K + E P+ LR E ++L+ ++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-----ENASPSELRDLLSEFNVLKQVNH 85
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGEN------------- 108
PHV++L +++G L L+ EY L+ ++R R+ G
Sbjct: 86 -PHVIKLYGA---CSQDG--PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 109 -------IPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR 161
+ + + S +Q+ +G+ + ++HRDL N+L+ + +KI+D GL+R
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV-AEGRKMKISDFGLSR 198
Query: 162 AF---TLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+K+ I W A E L Y+T D+WS + E+VT
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWM-AIESLFDHI-YTTQSDVWSFGVLLWEIVT 247
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 6/154 (3%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
F +LEK+G G +G V++ ++ G I A+K+++ LREV +L + H
Sbjct: 13 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 72
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
VVR + + + EY + L I + +K L+ Q+ +G
Sbjct: 73 VVRYFSAWAEDDH-----MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLG 158
+ + H ++H D+KP N+ + R ++ ++ G
Sbjct: 128 LRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEG 161
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 177
+ Q+ G + H + ++HRDLK NL ++ + + +KI D GLA ++ T
Sbjct: 123 LRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKTLCGTP 181
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 237
Y APEVL H S VD+WS+ CI L+ F + L I + NE
Sbjct: 182 NYIAPEVLSKKGH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK-----NEYS 235
Query: 238 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P NP + + L+++MLQ DP+ R + + + +F
Sbjct: 236 IPK-----------HINPVAAS------------LIQKMLQTDPTARPTINELLNDEFF 271
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 6/154 (3%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
F +LEK+G G +G V++ ++ G I A+K+++ LREV +L + H
Sbjct: 9 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 68
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
VVR + + + EY + L I + +K L+ Q+ +G
Sbjct: 69 VVRYFSAWAEDDH-----MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 123
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLG 158
+ + H ++H D+KP N+ + R ++ ++ G
Sbjct: 124 LRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEG 157
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 37/226 (16%)
Query: 12 VGEGTYGKVYRAREKATGKI-----VALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
+G G +GKV A K VA+K + + D + E+ ++ L ++
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLK-EKADSSEREALMSELKMMTQLGSHENI 111
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQ----------------TGENI 109
V L+ +YL+FEY DL Y+RS R+ E++
Sbjct: 112 VNLLGACTLSGP-----IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 110 PVNTVKSLM---YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP 166
V T + L+ YQ+ KG+ F +HRDL N+L+ + +KI D GLAR +
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKV-VKICDFGLARD-IMS 224
Query: 167 IKKYT---HEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
Y + L + + APE L Y+ D+WS + E+ +
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGI-YTIKSDVWSYGILLWEIFS 269
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 9 LEKVGEGTYGKVYRAREKA-TGKIVALKKTRLHEDDEGVPPTT---LREVSILRMLSRDP 64
LEK+G+G++G V R A +GK V++ L D P +REV+ + L
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR- 75
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
+++RL V + T L + +D L+K+ F + T+ Q+ +G
Sbjct: 76 NLIRLYGVVLTPPMKMVTELAPLGSLLDR-LRKHQGHFL-------LGTLSRYAVQVAEG 127
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT---HEILTLWYRA 181
+ + +HRDL NLL+ + + +KI D GL RA Y H + + A
Sbjct: 128 MGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVT 209
PE L T +S A D W E+ T
Sbjct: 187 PESLKTRT-FSHASDTWMFGVTLWEMFT 213
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 94/224 (41%), Gaps = 19/224 (8%)
Query: 12 VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPP-----TTLREVSILRMLSRD--- 63
+G+G +G V+ A + T ++ K G P T EV++L +
Sbjct: 39 LGKGGFGTVF-AGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
P V+RL+D + Q EG +L L DL YI GE + Q+
Sbjct: 98 PGVIRLLDWFETQ--EG-FMLVLERPLPAQDLFDYITEKGPLGEG----PSRCFFGQVVA 150
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPE 183
+ CH G++HRD+K N+L+D + K+ D G L + YT T Y PE
Sbjct: 151 AIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG--SGALLHDEPYTDFDGTRVYSPPE 208
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE-LQQLLHI 226
+ +++ +WS+ + ++V F D E L+ LH
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHF 252
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 9 LEKVGEGTYGKVYRAREKA-TGKIVALKKTRLHEDDEGVPPTT---LREVSILRMLSRDP 64
LEK+G+G++G V R A +GK V++ L D P +REV+ + L
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR- 71
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
+++RL V + T L + +D L+K+ F + T+ Q+ +G
Sbjct: 72 NLIRLYGVVLTPPMKMVTELAPLGSLLDR-LRKHQGHFL-------LGTLSRYAVQVAEG 123
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT---HEILTLWYRA 181
+ + +HRDL NLL+ + + +KI D GL RA Y H + + A
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVT 209
PE L T +S A D W E+ T
Sbjct: 183 PESLKTRT-FSHASDTWMFGVTLWEMFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 9 LEKVGEGTYGKVYRAREKA-TGKIVALKKTRLHEDDEGVPPTT---LREVSILRMLSRDP 64
LEK+G+G++G V R A +GK V++ L D P +REV+ + L
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR- 81
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
+++RL V + T L + +D L+K+ F + T+ Q+ +G
Sbjct: 82 NLIRLYGVVLTPPMKMVTELAPLGSLLDR-LRKHQGHFL-------LGTLSRYAVQVAEG 133
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT---HEILTLWYRA 181
+ + +HRDL NLL+ + + +KI D GL RA Y H + + A
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 192
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVT 209
PE L T +S A D W E+ T
Sbjct: 193 PESLKTRT-FSHASDTWMFGVTLWEMFT 219
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 110/243 (45%), Gaps = 37/243 (15%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT-----LREVSILRMLSRD 63
++++G G +G+V+ + K VA+K + P T L E ++++ L D
Sbjct: 18 VKRLGAGQFGEVWMGYYNNSTK-VAVKTLK--------PGTMSVQAFLEEANLMKTLQHD 68
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+VRL V + +Y++ EYM L +++S G + + + Q+
Sbjct: 69 -KLVRLYAVVTREEP-----IYIITEYMAKGSLLDFLKS--DEGGKVLLPKLIDFSAQIA 120
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWY 179
+G+A+ +HRDL+ N+L+ M KIAD GLAR + +YT + +
Sbjct: 121 EGMAYIERKNYIHRDLRAANVLVSESLMC-KIADFGLAR--VIEDNEYTAREGAKFPIKW 177
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPGDSE------LQQLLHIFRLLGT 232
APE + ++ D+WS + E+VT + +PG + L Q + R+
Sbjct: 178 TAPEA-INFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENC 236
Query: 233 PNE 235
P+E
Sbjct: 237 PDE 239
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 177
+ Q+ G + H + ++HRDLK NL ++ + + +KI D GLA ++ T
Sbjct: 147 LRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKVLCGTP 205
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 237
Y APEVL H S VD+WS+ CI L+ F + L I + NE
Sbjct: 206 NYIAPEVLSKKGH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK-----NEYS 259
Query: 238 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P NP + + L+++MLQ DP+ R + + + +F
Sbjct: 260 IPK-----------HINPVAAS------------LIQKMLQTDPTARPTINELLNDEFF 295
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 177
+ Q+ G + H + ++HRDLK NL ++ + + +KI D GLA ++ T
Sbjct: 145 LRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKVLCGTP 203
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 237
Y APEVL H S VD+WS+ CI L+ F + L I + NE
Sbjct: 204 NYIAPEVLSKKGH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK-----NEYS 257
Query: 238 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P NP + + L+++MLQ DP+ R + + + +F
Sbjct: 258 IPK-----------HINPVAAS------------LIQKMLQTDPTARPTINELLNDEFF 293
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 100
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
PHV RL+ + + T L +D Y+R + +NI + + Q+
Sbjct: 101 NPHVCRLLGICLTSTVQLITQLMPFGCLLD-----YVREHK---DNIGSQYLLNWCVQIA 152
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYR 180
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 153 KGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 211
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 212 ALESILHRI-YTHQSDVWSYGVTVWELMT 239
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 47/231 (20%)
Query: 12 VGEGTYGKVYRA-----REKATGKIVALKKTRLHEDDEGVPPTTLR----EVSILRMLSR 62
+GEG +GKV +A + +A VA+K + E P+ LR E ++L+ ++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-----ENASPSELRDLLSEFNVLKQVNH 85
Query: 63 DPHVVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGEN------------- 108
PHV++L +++G L L+ EY L+ ++R R+ G
Sbjct: 86 -PHVIKLYGA---CSQDG--PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 109 -------IPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR 161
+ + + S +Q+ +G+ + ++HRDL N+L+ + +KI+D GL+R
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV-AEGRKMKISDFGLSR 198
Query: 162 AFTLP---IKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+K+ I W A E L Y+T D+WS + E+VT
Sbjct: 199 DVYEEDSYVKRSQGRIPVKWM-AIESLFDHI-YTTQSDVWSFGVLLWEIVT 247
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 9 LEKVGEGTYGKVYRAREKA-TGKIVALKKTRLHEDDEGVPPTT---LREVSILRMLSRDP 64
LEK+G+G++G V R A +GK V++ L D P +REV+ + L
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR- 75
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
+++RL V + T L + +D L+K+ F + T+ Q+ +G
Sbjct: 76 NLIRLYGVVLTPPMKMVTELAPLGSLLDR-LRKHQGHFL-------LGTLSRYAVQVAEG 127
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT---HEILTLWYRA 181
+ + +HRDL NLL+ + + +KI D GL RA Y H + + A
Sbjct: 128 MGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVT 209
PE L T +S A D W E+ T
Sbjct: 187 PESLKTRT-FSHASDTWMFGVTLWEMFT 213
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 77
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
PHV RL+ + + T L +D Y+R + +NI + + Q+
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPFGCLLD-----YVREHK---DNIGSQYLLNWCVQIA 129
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYR 180
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 189 ALESILHRI-YTHQSDVWSYGVTVWELMT 216
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 75
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
PHV RL+ + + T L +D Y+R + +NI + + Q+
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLD-----YVREHK---DNIGSQYLLNWCVQIA 127
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYR 180
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 187 ALESILHRI-YTHQSDVWSYGVTVWELMT 214
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 9 LEKVGEGTYGKVYRAREKA-TGKIVALKKTRLHEDDEGVPPTT---LREVSILRMLSRDP 64
LEK+G+G++G V R A +GK V++ L D P +REV+ + L
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR- 71
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
+++RL V + T L + +D L+K+ F + T+ Q+ +G
Sbjct: 72 NLIRLYGVVLTPPMKMVTELAPLGSLLDR-LRKHQGHFL-------LGTLSRYAVQVAEG 123
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT---HEILTLWYRA 181
+ + +HRDL NLL+ + + +KI D GL RA Y H + + A
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVT 209
PE L T +S A D W E+ T
Sbjct: 183 PESLKTRT-FSHASDTWMFGVTLWEMFT 209
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 78
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
PHV RL+ + + T L +D Y+R + +NI + + Q+
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLD-----YVREHK---DNIGSQYLLNWCVQIA 130
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYR 180
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 190 ALESILHRI-YTHQSDVWSYGVTVWELMT 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 81
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
PHV RL+ + + T L +D Y+R + +NI + + Q+
Sbjct: 82 NPHVCRLLGICLTSTVQLITQLMPFGCLLD-----YVREHK---DNIGSQYLLNWCVQIA 133
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYR 180
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 134 KGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 192
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 193 ALESILHRI-YTHQSDVWSYGVTVWELMT 220
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 25/208 (12%)
Query: 9 LEKVGEGTYGKVYRAR--EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHV 66
++++G G +G V+ K I +++ + E+D + E ++ LS P +
Sbjct: 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED------FIEEAEVMMKLSH-PKL 65
Query: 67 VRLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGV 125
V+L V Q + LV E+M+ L Y+R+ R T+ + +C+G+
Sbjct: 66 VQLYGVCLEQAP-----ICLVTEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGM 117
Query: 126 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAP 182
A+ ++HRDL N L+ + +K++D G+ R F L +YT T + + +P
Sbjct: 118 AYLEEACVIHRDLAARNCLVG-ENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFPVKWASP 174
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVTK 210
EV + YS+ D+WS + E+ ++
Sbjct: 175 EV-FSFSRYSSKSDVWSFGVLMWEVFSE 201
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 85
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
PHV RL+ + + T L +D Y+R + +NI + + Q+
Sbjct: 86 NPHVCRLLGICLTSTVQLITQLMPFGCLLD-----YVREHK---DNIGSQYLLNWCVQIA 137
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYR 180
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 138 KGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 196
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 197 ALESILHRI-YTHQSDVWSYGVTVWELMT 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 78
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
PHV RL+ + + T L +D Y+R + +NI + + Q+
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLD-----YVREHK---DNIGSQYLLNWCVQIA 130
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYR 180
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 190 ALESILHRI-YTHQSDVWSYGVTVWELMT 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 78
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
PHV RL+ + + T L +D Y+R + +NI + + Q+
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLD-----YVREHK---DNIGSQYLLNWCVQIA 130
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYR 180
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 190 ALESILHRI-YTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 82
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
PHV RL+ + + T L +D Y+R + +NI + + Q+
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLD-----YVREHK---DNIGSQYLLNWCVQIA 134
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYR 180
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 194 ALESILHRI-YTHQSDVWSYGVTVWELMT 221
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 118 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 177
+ Q+ G + H + ++HRDLK NL ++ + + +KI D GLA ++ T
Sbjct: 121 LRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKVLCGTP 179
Query: 178 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 237
Y APEVL H S VD+WS+ CI L+ F + L I + NE
Sbjct: 180 NYIAPEVLSKKGH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK-----NEYS 233
Query: 238 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 296
P NP + + L+++MLQ DP+ R + + + +F
Sbjct: 234 IPK-----------HINPVAAS------------LIQKMLQTDPTARPTINELLNDEFF 269
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 56/206 (27%)
Query: 112 NTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT 171
+T+ +++ ++ +G+ + H +G +HRD+K N+L+ +++IAD G++ AF T
Sbjct: 121 STIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG-SVQIADFGVS-AFLATGGDIT 178
Query: 172 HE------ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLH 225
+ T + APEV+ Y D+WS EL T A
Sbjct: 179 RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA------------- 225
Query: 226 IFRLLGTPNEKVWPGVSSLMNWHEYP---------QWNPQSLATAVPNLD------KDGL 270
+H+YP Q +P SL T V + + K
Sbjct: 226 --------------------PYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFR 265
Query: 271 DLLEQMLQYDPSKRISAKKAMEHPYF 296
++ LQ DP KR +A + + H +F
Sbjct: 266 KMISLCLQKDPEKRPTAAELLRHKFF 291
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 69
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
PHV RL+ + + T L +D Y+R + +NI + + Q+
Sbjct: 70 NPHVCRLLGICLTSTVQLITQLMPFGCLLD-----YVREHK---DNIGSQYLLNWCVQIA 121
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYR 180
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 122 KGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 181 ALESILHRI-YTHQSDVWSYGVTVWELMT 208
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+VG G++G+V+R ++K TG A+KK RL + E+ LS P +V L
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLE-------VFRVEELVACAGLS-SPRIVPLY 132
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 130
G +EG V + L + I+ Q G +P + + Q +G+ + H
Sbjct: 133 ----GAVREGPWVNIFMELLEGGSLGQLIK---QMG-CLPEDRALYYLGQALEGLEYLHT 184
Query: 131 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY-------RAPE 183
ILH D+K N+L+ + D G A L +LT Y APE
Sbjct: 185 RRILHGDVKADNVLLSSDGSRAALCDFG--HALCLQPDGLGKSLLTGDYIPGTETHMAPE 242
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVT 209
V++G VD+WS C+ ++
Sbjct: 243 VVMGKP-CDAKVDIWSSCCMMLHMLN 267
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 75
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
PHV RL+ + + T L +D Y+R + +NI + + Q+
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLD-----YVREHK---DNIGSQYLLNWCVQIA 127
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYR 180
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 187 ALESILHRI-YTHQSDVWSYGVTVWELMT 214
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 34/219 (15%)
Query: 12 VGEGTYGKVYRAR-EKATGKIVALKKTRLHEDDEGVPPTT--LREVSILRMLSRDPHVVR 68
+G+G +G V A+ ++ G V + L D LRE + ++ PHV +
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH-PHVAK 89
Query: 69 LMDVKQGQNKEGRT-VLYLVFEYMD-TDLKKYIRSFRQTGEN---IPVNTVKSLMYQLCK 123
L+ V +GR + ++ +M DL ++ + R GEN +P+ T+ M +
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASR-IGENPFNLPLQTLVRFMVDIAC 148
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR------------AFTLPIKKYT 171
G+ + +HRDL N ++ + MT+ +AD GL+R A LP+K
Sbjct: 149 GMEYLSSRNFIHRDLAARNCML-AEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 172 HEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTK 210
E L Y+ D+W+ E++T+
Sbjct: 208 LES-----------LADNLYTVHSDVWAFGVTMWEIMTR 235
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
+VG G++G+V+R ++K TG A+KK RL + E+ LS P +V L
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-------FRVEELVACAGLS-SPRIVPLY 116
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 130
G +EG V + L + I+ Q G +P + + Q +G+ + H
Sbjct: 117 ----GAVREGPWVNIFMELLEGGSLGQLIK---QMG-CLPEDRALYYLGQALEGLEYLHT 168
Query: 131 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY-------RAPE 183
ILH D+K N+L+ + D G A L +LT Y APE
Sbjct: 169 RRILHGDVKADNVLLSSDGSRAALCDFG--HALCLQPDGLGKSLLTGDYIPGTETHMAPE 226
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVT 209
V++G VD+WS C+ ++
Sbjct: 227 VVMGKP-CDAKVDIWSSCCMMLHMLN 251
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 89/214 (41%), Gaps = 26/214 (12%)
Query: 12 VGEGTYGKVYRAREKATGK-------IVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
+G G +GKV A GK V + K+ H D++ + E+ I+ L +
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK---EALMSELKIMSHLGQHE 102
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSF------RQTGENIPVNTVKSLM 118
++V L+ G G VL + DL ++R ++ G + + +
Sbjct: 103 NIVNLL----GACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 158
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF---TLPIKKYTHEIL 175
Q+ +G+AF +HRD+ N+L+ + KI D GLAR + I K +
Sbjct: 159 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIMNDSNYIVKGNARLP 217
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
W APE + Y+ D+WS + E+ +
Sbjct: 218 VKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFS 249
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 32/220 (14%)
Query: 12 VGEGTYGKVYRAREKATGK-------IVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
+G G +GKV A GK V + K+ H D++ + E+ I+ L +
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK---EALMSELKIMSHLGQHE 110
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVN---------TVK 115
++V L+ G G VL + DL ++R R G N + +
Sbjct: 111 NIVNLL----GACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSR 166
Query: 116 SLMY---QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF---TLPIKK 169
L++ Q+ +G+AF +HRD+ N+L+ + KI D GLAR + I K
Sbjct: 167 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIMNDSNYIVK 225
Query: 170 YTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ W APE + Y+ D+WS + E+ +
Sbjct: 226 GNARLPVKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFS 263
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 56/206 (27%)
Query: 112 NTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT 171
+T+ +++ ++ +G+ + H +G +HRD+K N+L+ +++IAD G++ AF T
Sbjct: 116 STIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG-SVQIADFGVS-AFLATGGDIT 173
Query: 172 HE------ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLH 225
+ T + APEV+ Y D+WS EL T A
Sbjct: 174 RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA------------- 220
Query: 226 IFRLLGTPNEKVWPGVSSLMNWHEYP---------QWNPQSLATAVPNLD------KDGL 270
+H+YP Q +P SL T V + + K
Sbjct: 221 --------------------PYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFR 260
Query: 271 DLLEQMLQYDPSKRISAKKAMEHPYF 296
++ LQ DP KR +A + + H +F
Sbjct: 261 KMISLCLQKDPEKRPTAAELLRHKFF 286
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 110/243 (45%), Gaps = 37/243 (15%)
Query: 9 LEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTT-----LREVSILRMLSRD 63
++K+G G +G+V+ + K VA+K + P T L E ++++ L D
Sbjct: 17 VKKLGAGQFGEVWMGYYNNSTK-VAVKTLK--------PGTMSVQAFLEEANLMKTLQHD 67
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+VRL V + +Y++ E+M L +++S G + + + Q+
Sbjct: 68 -KLVRLYAVVTKEEP-----IYIITEFMAKGSLLDFLKS--DEGGKVLLPKLIDFSAQIA 119
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWY 179
+G+A+ +HRDL+ N+L+ M KIAD GLAR + +YT + +
Sbjct: 120 EGMAYIERKNYIHRDLRAANVLVSESLMC-KIADFGLAR--VIEDNEYTAREGAKFPIKW 176
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPGD------SELQQLLHIFRLLGT 232
APE + ++ ++WS + E+VT + +PG S L Q + R+
Sbjct: 177 TAPEA-INFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENC 235
Query: 233 PNE 235
P+E
Sbjct: 236 PDE 238
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIMELREATSPKANKEILDEAYVMASVD 109
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
PHV RL+ + + T L +D Y+R + +NI + + Q+
Sbjct: 110 NPHVCRLLGICLTSTVQLITQLMPFGCLLD-----YVREHK---DNIGSQYLLNWCVQIA 161
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYR 180
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 162 KGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 220
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 221 ALESILHRI-YTHQSDVWSYGVTVWELMT 248
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 89/214 (41%), Gaps = 26/214 (12%)
Query: 12 VGEGTYGKVYRAREKATGK-------IVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
+G G +GKV A GK V + K+ H D++ + E+ I+ L +
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK---EALMSELKIMSHLGQHE 110
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSF------RQTGENIPVNTVKSLM 118
++V L+ G G VL + DL ++R ++ G + + +
Sbjct: 111 NIVNLL----GACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 166
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF---TLPIKKYTHEIL 175
Q+ +G+AF +HRD+ N+L+ + KI D GLAR + I K +
Sbjct: 167 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 176 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
W APE + Y+ D+WS + E+ +
Sbjct: 226 VKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFS 257
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 22/228 (9%)
Query: 20 VYRAREKATGKIVALK--KTRLHEDDEGVPPTTLREVSILRMLSR--DPHVVRLMDVKQG 75
VY A + +IVALK L D P R R R +PHVV + D +
Sbjct: 50 VYEAEDTVRERIVALKLXSETLSSD----PVFRTRXQREARTAGRLQEPHVVPIHDFGEI 105
Query: 76 QNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 134
+ LY+ ++ DL +R RQ G P V +++ Q+ + H G
Sbjct: 106 DGQ-----LYVDXRLINGVDLAAXLR--RQ-GPLAPPRAV-AIVRQIGSALDAAHAAGAT 156
Query: 135 HRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYTHEILTLWYRAPEVLLGSTHYST 193
HRD+KP N+L+ + D G+A A T + + + + TL+Y APE +H +
Sbjct: 157 HRDVKPENILVSADDFAY-LVDFGIASATTDEKLTQLGNTVGTLYYXAPE-RFSESHATY 214
Query: 194 AVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 241
D++++ C+ E +T + + GD HI + + P+ V PG+
Sbjct: 215 RADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPS-TVRPGI 261
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 88/218 (40%), Gaps = 30/218 (13%)
Query: 12 VGEGTYGKVYRAREKATGK-------IVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
+G G +GKV A GK V + K+ H D++ + E+ I+ L +
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK---EALMSELKIMSHLGQHE 110
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKS-------- 116
++V L+ G G VL + DL ++R + E P + +
Sbjct: 111 NIVNLL----GACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDL 166
Query: 117 --LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF---TLPIKKYT 171
Q+ +G+AF +HRD+ N+L+ + KI D GLAR + I K
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIMNDSNYIVKGN 225
Query: 172 HEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ W APE + Y+ D+WS + E+ +
Sbjct: 226 ARLPVKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFS 261
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 88/218 (40%), Gaps = 30/218 (13%)
Query: 12 VGEGTYGKVYRAREKATGK-------IVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
+G G +GKV A GK V + K+ H D++ + E+ I+ L +
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK---EALMSELKIMSHLGQHE 110
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKS-------- 116
++V L+ G G VL + DL ++R + E P + +
Sbjct: 111 NIVNLL----GACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDL 166
Query: 117 --LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF---TLPIKKYT 171
Q+ +G+AF +HRD+ N+L+ + KI D GLAR + I K
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIMNDSNYIVKGN 225
Query: 172 HEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
+ W APE + Y+ D+WS + E+ +
Sbjct: 226 ARLPVKW-MAPESIFDCV-YTVQSDVWSYGILLWEIFS 261
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 72
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
PHV RL+ + + T L +D Y+R + +NI + + Q+
Sbjct: 73 NPHVCRLLGICLTSTVQLITQLMPFGCLLD-----YVREHK---DNIGSQYLLNWCVQIA 124
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYR 180
+G+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 125 EGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 183
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 184 ALESILHRI-YTHQSDVWSYGVTVWELMT 211
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLM 70
++G G++G+V+R ++K TG A+KK RL + E+ LS P +V L
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVRLE-------VFRVEELVACAGLS-SPRIVPLY 130
Query: 71 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 130
G +EG V + L + I+ Q G +P + + Q +G+ + H
Sbjct: 131 ----GAVREGPWVNIFMELLEGGSLGQLIK---QMG-CLPEDRALYYLGQALEGLEYLHT 182
Query: 131 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY-------RAPE 183
ILH D+K N+L+ + D G A L +LT Y APE
Sbjct: 183 RRILHGDVKADNVLLSSDGSRAALCDFG--HALCLQPDGLGKSLLTGDYIPGTETHMAPE 240
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVT 209
V++G VD+WS C+ ++
Sbjct: 241 VVMGKP-CDAKVDIWSSCCMMLHMLN 265
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 77
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQL 121
PHV RL+ + + + L+ + M L Y+R + +NI + + Q+
Sbjct: 78 NPHVCRLLGICL------TSTVQLIMQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQI 128
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWY 179
KG+ + ++HRDL N+L+ + +KI D G A+ K+Y E + + +
Sbjct: 129 AKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 188 MALESILHRI-YTHQSDVWSYGVTVWELMT 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 77
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQL 121
PHV RL+ + + + L+ + M L Y+R + +NI + + Q+
Sbjct: 78 NPHVCRLLGICL------TSTVQLIMQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQI 128
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWY 179
KG+ + ++HRDL N+L+ + +KI D G A+ K+Y E + + +
Sbjct: 129 AKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 188 MALESILHRI-YTHQSDVWSYGVTVWELMT 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 79
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQL 121
PHV RL+ + + + L+ + M L Y+R + +NI + + Q+
Sbjct: 80 NPHVCRLLGICL------TSTVQLIMQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQI 130
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWY 179
KG+ + ++HRDL N+L+ + +KI D G A+ K+Y E + + +
Sbjct: 131 AKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 189
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 190 MALESILHRI-YTHQSDVWSYGVTVWELMT 218
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ + G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 82
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQL 121
PHV RL+ + + + L+ + M L Y+R + +NI + + Q+
Sbjct: 83 NPHVCRLLGICL------TSTVQLIMQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQI 133
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWY 179
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 134 AKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 193 MALESILHRI-YTHQSDVWSYGVTVWELMT 221
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 8 KLEKV-GEGTYGKVYRAREKATGK---IVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
K+E+V G G +G+V R K GK VA+K ++ E L E SI+
Sbjct: 46 KIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT-EKQRRDFLCEASIMGQFDH- 103
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLC 122
P+VV L +G G+ V+ +V E+M+ L ++R + G+ + V ++ +
Sbjct: 104 PNVVHL----EGVVTRGKPVM-IVIEFMENGALDAFLR--KHDGQFTVIQLV-GMLRGIA 155
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYT---HEILTLW 178
G+ + G +HRDL N+L++ + K++D GL+R P YT +I W
Sbjct: 156 AGMRYLADMGYVHRDLAARNILVN-SNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRW 214
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
APE + +++A D+WS + E+++
Sbjct: 215 -TAPEAIQ-YRKFTSASDVWSYGIVMWEVMS 243
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 9 LEKVGEGTYGKVYRAREKA-TGKIVALKKTRLHEDDEGVPPTT---LREVSILRMLSRDP 64
LEK+G+G++G V R A +GK V++ L D P +REV+ + L
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR- 81
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
+++RL V + T L + +D L+K+ F + T+ Q+ +G
Sbjct: 82 NLIRLYGVVLTPPMKMVTELAPLGSLLDR-LRKHQGHFL-------LGTLSRYAVQVAEG 133
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKK-----YTHEILTLWY 179
+ + +HRDL NLL+ + + +KI D GL RA LP H + +
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRA--LPQNDDHXVMQEHRKVPFAW 190
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
APE L T +S A D W E+ T
Sbjct: 191 CAPESLKTRT-FSHASDTWMFGVTLWEMFT 219
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 28/207 (13%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS-RDPHVVRL 69
++G G++G+V+R +K TG A+KK RL R ++ P +V L
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLE---------VFRAEELMACAGLTSPRIVPL 131
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G +EG V + L + ++ + G +P + + Q +G+ + H
Sbjct: 132 Y----GAVREGPWVNIFMELLEGGSLGQLVK---EQG-CLPEDRALYYLGQALEGLEYLH 183
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY-------RAP 182
ILH D+K N+L+ + D G A L ++LT Y AP
Sbjct: 184 SRRILHGDVKADNVLLSSDGSHAALCDFG--HAVCLQPDGLGKDLLTGDYIPGTETHMAP 241
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVT 209
EV+LG + VD+WS C+ ++
Sbjct: 242 EVVLGRS-CDAKVDVWSSCCMMLHMLN 267
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 101/233 (43%), Gaps = 41/233 (17%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKT-------RLHEDDEGVPPTTLREVSILRML-- 60
+++G G++G VY+ + + L T + +++ GV T R V+IL +
Sbjct: 18 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGY 76
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT--DLKKYIRSFRQTGENIPVNTVKSLM 118
S P + + +G + LY +T ++KK I RQT
Sbjct: 77 STKPQLAIVTQWCEGSS------LYHHLHASETKFEMKKLIDIARQT------------- 117
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT-- 176
+G+ + H I+HRDLK +N+ + T+KI D GLA + + E L+
Sbjct: 118 ---ARGMDYLHAKSIIHRDLKSNNIFLHEDN-TVKIGDFGLATVKSRWSGSHQFEQLSGS 173
Query: 177 -LWYRAPEV--LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHI 226
LW APEV + S YS D+++ + EL+T + + Q++ +
Sbjct: 174 ILWM-APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 225
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 75
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
PHV RL+ + + T L +D Y+R + +NI + + Q+
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLD-----YVREHK---DNIGSQYLLNWCVQIA 127
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYR 180
KG+ + ++HRDL N+L+ + +KI D G A+ K+Y E + + +
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 187 ALESILHRI-YTHQSDVWSYGVTVWELMT 214
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 10 EKVGEGTYGKVYRAR---EKATGKIVALKKTR-LHEDDEGVPPTTLREVSILRMLSRDPH 65
E +G+G +G+V+R + E+ KI + ++ R + E LR +IL ++ D
Sbjct: 48 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD-- 105
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGEN---IPVNTVKSLMYQL 121
++ T L+LV +Y + L Y+ + T E + ++T L +
Sbjct: 106 ---------NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 156
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLA-----RAFTLPIKKYTHEILT 176
+ V I HRDLK N+L+ +K T IADLGLA T+ I H + T
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILV-KKNGTCCIADLGLAVRHDSATDTIDIAP-NHRVGT 214
Query: 177 LWYRAPEVL---LGSTHYST--AVDMWSVACIFAELVTKTAL 213
Y APEVL + H+ + D++++ +F E+ + ++
Sbjct: 215 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI 256
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 9 LEKVGEGTYGKVYRAREKA-TGKIVALKKTRLHEDDEGVPPTT---LREVSILRMLSRDP 64
LEK+G+G++G V R A +GK V++ L D P +REV+ + L
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR- 71
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
+++RL V + T L + +D L+K+ F + T+ Q+ +G
Sbjct: 72 NLIRLYGVVLTPPMKMVTELAPLGSLLDR-LRKHQGHFL-------LGTLSRYAVQVAEG 123
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKK-----YTHEILTLWY 179
+ + +HRDL NLL+ + + +KI D GL RA LP H + +
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRA--LPQNDDHXVMQEHRKVPFAW 180
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
APE L T +S A D W E+ T
Sbjct: 181 CAPESLKTRT-FSHASDTWMFGVTLWEMFT 209
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 77
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
PHV RL+ + + T L +D Y+R + +NI + + Q+
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPFGCLLD-----YVREHK---DNIGSQYLLNWCVQIA 129
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYR 180
KG+ + ++HRDL N+L+ + +KI D G A+ K+Y E + + +
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 189 ALESILHRI-YTHQSDVWSYGVTVWELMT 216
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ + G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 75
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
PHV RL+ + + T L +D Y+R + +NI + + Q+
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLD-----YVREHK---DNIGSQYLLNWCVQIA 127
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYR 180
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 187 ALESILHRI-YTHQSDVWSYGVTVWELMT 214
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 10 EKVGEGTYGKVYRAR---EKATGKIVALKKTR-LHEDDEGVPPTTLREVSILRMLSRDPH 65
E +G+G +G+V+R + E+ KI + ++ R + E LR +IL ++ D
Sbjct: 9 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD-- 66
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGEN---IPVNTVKSLMYQL 121
++ T L+LV +Y + L Y+ + T E + ++T L +
Sbjct: 67 ---------NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 117
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLA-----RAFTLPIKKYTHEILT 176
+ V I HRDLK N+L+ +K T IADLGLA T+ I H + T
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILV-KKNGTCCIADLGLAVRHDSATDTIDIAP-NHRVGT 175
Query: 177 LWYRAPEVL---LGSTHYST--AVDMWSVACIFAELVTKTAL 213
Y APEVL + H+ + D++++ +F E+ + ++
Sbjct: 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI 217
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ + G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 82
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
PHV RL+ + + T L +D Y+R + +NI + + Q+
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLD-----YVREHK---DNIGSQYLLNWCVQIA 134
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYR 180
KG+ + ++HRDL N+L+ + +KI D GLA+ K+Y E + + +
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 194 ALESILHRI-YTHQSDVWSYGVTVWELMT 221
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 10 EKVGEGTYGKVYRAR---EKATGKIVALKKTR-LHEDDEGVPPTTLREVSILRMLSRDPH 65
E +G+G +G+V+R + E+ KI + ++ R + E LR +IL ++ D
Sbjct: 15 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD-- 72
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGEN---IPVNTVKSLMYQL 121
++ T L+LV +Y + L Y+ + T E + ++T L +
Sbjct: 73 ---------NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 123
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLA-----RAFTLPIKKYTHEILT 176
+ V I HRDLK N+L+ +K T IADLGLA T+ I H + T
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILV-KKNGTCCIADLGLAVRHDSATDTIDIAP-NHRVGT 181
Query: 177 LWYRAPEVL---LGSTHYST--AVDMWSVACIFAELVTKTAL 213
Y APEVL + H+ + D++++ +F E+ + ++
Sbjct: 182 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI 223
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 10 EKVGEGTYGKVYRAR---EKATGKIVALKKTR-LHEDDEGVPPTTLREVSILRMLSRDPH 65
E +G+G +G+V+R + E+ KI + ++ R + E LR +IL ++ D
Sbjct: 10 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD-- 67
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGEN---IPVNTVKSLMYQL 121
++ T L+LV +Y + L Y+ + T E + ++T L +
Sbjct: 68 ---------NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 118
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLA-----RAFTLPIKKYTHEILT 176
+ V I HRDLK N+L+ +K T IADLGLA T+ I H + T
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILV-KKNGTCCIADLGLAVRHDSATDTIDIAP-NHRVGT 176
Query: 177 LWYRAPEVL---LGSTHYST--AVDMWSVACIFAELVTKTAL 213
Y APEVL + H+ + D++++ +F E+ + ++
Sbjct: 177 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI 218
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREV--SILRMLSRD 63
F+K++ +G G +G VY+ G+ V + + E E P +E+ M S D
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVD 82
Query: 64 -PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
PHV RL+ + + T L +D Y+R + +NI + + Q+
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLD-----YVREHK---DNIGSQYLLNWCVQIA 134
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYR 180
KG+ + ++HRDL N+L+ + +KI D G A+ K+Y E + + +
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVT 209
A E +L Y+ D+WS EL+T
Sbjct: 194 ALESILHRI-YTHQSDVWSYGVTVWELMT 221
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 13/93 (13%)
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------T 176
G+ F H + +HRD+K N+L+D + T KI+D GLARA +K+ ++ T
Sbjct: 144 NGINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARA----SEKFAQTVMXSRIVGT 198
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
Y APE L G + D++S + E++T
Sbjct: 199 TAYMAPEALRGEI--TPKSDIYSFGVVLLEIIT 229
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 104/253 (41%), Gaps = 49/253 (19%)
Query: 12 VGEGTYGKVYRA-------REKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
+G G +GKV A + A V + K H + + E+ +L L
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER---EALMSELKVLSYLGNHM 103
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM------ 118
++V L+ G G L + DL ++R R+ I T ++M
Sbjct: 104 NIVNLL----GACTIGGPTLVITEYCCYGDLLNFLR--RKRDSFICSKTSPAIMEDDELA 157
Query: 119 ----------YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIK 168
YQ+ KG+AF +HRDL N+L+ +T KI D GLAR IK
Sbjct: 158 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT-KICDFGLAR----DIK 212
Query: 169 KYTHEI------LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG---DS 218
++ + L + + APE + Y+ D+WS EL + ++ +PG DS
Sbjct: 213 NDSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 271
Query: 219 ELQQLL-HIFRLL 230
+ +++ FR+L
Sbjct: 272 KFYKMIKEGFRML 284
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 13/93 (13%)
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------T 176
G+ F H + +HRD+K N+L+D + T KI+D GLARA +K+ ++ T
Sbjct: 144 NGINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARAS----EKFAQTVMXXRIVGT 198
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
Y APE L G + D++S + E++T
Sbjct: 199 TAYMAPEALRGEI--TPKSDIYSFGVVLLEIIT 229
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 16/216 (7%)
Query: 6 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
FE L+ +G G +G+V + K K+ A+K E + RE + +
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEY-MDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
+ L Q N LYLV +Y + DL + F + +P + + ++
Sbjct: 136 ITTLHYAFQDDNN-----LYLVMDYYVGGDLLTLLSKFE---DRLPEEMARFYLAEMVIA 187
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLA-RAFTLPIKKYTHEILTLWYRAPE 183
+ H +HRD+KP N+LMD +++AD G + + + + T Y +PE
Sbjct: 188 IDSVHQLHYVHRDIKPDNILMDMNGH-IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPE 246
Query: 184 VLL----GSTHYSTAVDMWSVA-CIFAELVTKTALF 214
+L G Y D WS+ C++ L +T +
Sbjct: 247 ILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY 282
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 13/93 (13%)
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------T 176
G+ F H + +HRD+K N+L+D + T KI+D GLARA +K+ ++ T
Sbjct: 138 NGINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARA----SEKFAQXVMXXRIVGT 192
Query: 177 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
Y APE L G + D++S + E++T
Sbjct: 193 TAYMAPEALRGEI--TPKSDIYSFGVVLLEIIT 223
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 10 EKVGEGTYGKVYRAR---EKATGKIVALKKTR-LHEDDEGVPPTTLREVSILRMLSRDPH 65
E +G+G +G+V+R + E+ KI + ++ R + E LR +IL ++ D
Sbjct: 35 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD-- 92
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGEN---IPVNTVKSLMYQL 121
++ T L+LV +Y + L Y+ + T E + ++T L +
Sbjct: 93 ---------NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 143
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLA-----RAFTLPIKKYTHEILT 176
+ V I HRDLK N+L+ +K T IADLGLA T+ I H + T
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILV-KKNGTCCIADLGLAVRHDSATDTIDIAP-NHRVGT 201
Query: 177 LWYRAPEVL---LGSTHYST--AVDMWSVACIFAELVTKTAL 213
Y APEVL + H+ + D++++ +F E+ + ++
Sbjct: 202 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI 243
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI- 174
S YQ+ KG+AF +HRDL N+L+ +T KI D GLAR IK ++ +
Sbjct: 167 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT-KICDFGLAR----DIKNDSNYVV 221
Query: 175 -----LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG---DSELQQLL- 224
L + + APE + Y+ D+WS EL + ++ +PG DS+ +++
Sbjct: 222 KGNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 280
Query: 225 HIFRLL 230
FR+L
Sbjct: 281 EGFRML 286
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI- 174
S YQ+ KG+AF +HRDL N+L+ +T KI D GLAR IK ++ +
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT-KICDFGLAR----DIKNDSNYVV 226
Query: 175 -----LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG---DSELQQLL- 224
L + + APE + Y+ D+WS EL + ++ +PG DS+ +++
Sbjct: 227 KGNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
Query: 225 HIFRLL 230
FR+L
Sbjct: 286 EGFRML 291
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 10 EKVGEGTYGKVYRAR---EKATGKIVALKKTR-LHEDDEGVPPTTLREVSILRMLSRDPH 65
E +G+G +G+V+R + E+ KI + ++ R + E LR +IL ++ D
Sbjct: 12 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD-- 69
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMD-TDLKKYIRSFRQTGEN---IPVNTVKSLMYQL 121
++ T L+LV +Y + L Y+ + T E + ++T L +
Sbjct: 70 ---------NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 120
Query: 122 CKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLA-----RAFTLPIKKYTHEILT 176
+ V I HRDLK N+L+ +K T IADLGLA T+ I H + T
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILV-KKNGTCCIADLGLAVRHDSATDTIDIAP-NHRVGT 178
Query: 177 LWYRAPEVL---LGSTHYST--AVDMWSVACIFAELVTKTAL 213
Y APEVL + H+ + D++++ +F E+ + ++
Sbjct: 179 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI 220
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 116 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI- 174
S YQ+ KG+AF +HRDL N+L+ +T KI D GLAR IK ++ +
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT-KICDFGLARH----IKNDSNYVV 226
Query: 175 -----LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG---DSELQQLL- 224
L + + APE + Y+ D+WS EL + ++ +PG DS+ +++
Sbjct: 227 KGNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
Query: 225 HIFRLL 230
FR+L
Sbjct: 286 EGFRML 291
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 104/253 (41%), Gaps = 49/253 (19%)
Query: 12 VGEGTYGKVYRA-------REKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDP 64
+G G +GKV A + A V + K H + + E+ +L L
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER---EALMSELKVLSYLGNHM 87
Query: 65 HVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM------ 118
++V L+ G G L + DL ++R R+ I T ++M
Sbjct: 88 NIVNLL----GACTIGGPTLVITEYCCYGDLLNFLR--RKRDSFICSKTSPAIMEDDELA 141
Query: 119 ----------YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIK 168
YQ+ KG+AF +HRDL N+L+ +T KI D GLAR IK
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT-KICDFGLAR----DIK 196
Query: 169 KYTHEI------LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG---DS 218
++ + L + + APE + Y+ D+WS EL + ++ +PG DS
Sbjct: 197 NDSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 255
Query: 219 ELQQLL-HIFRLL 230
+ +++ FR+L
Sbjct: 256 KFYKMIKEGFRML 268
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 101/233 (43%), Gaps = 41/233 (17%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKT-------RLHEDDEGVPPTTLREVSILRML-- 60
+++G G++G VY+ + + L T + +++ GV T R V+IL +
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGY 88
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT--DLKKYIRSFRQTGENIPVNTVKSLM 118
S P + + +G + LY +T ++KK I RQT
Sbjct: 89 STKPQLAIVTQWCEG------SSLYHHLHASETKFEMKKLIDIARQT------------- 129
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT-- 176
+G+ + H I+HRDLK +N+ + T+KI D GLA + + E L+
Sbjct: 130 ---ARGMDYLHAKSIIHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRWSGSHQFEQLSGS 185
Query: 177 -LWYRAPEV--LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHI 226
LW APEV + S YS D+++ + EL+T + + Q++ +
Sbjct: 186 ILWM-APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 25/208 (12%)
Query: 12 VGEGTYGKVYRAREKATGK------IVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+G G G+V R + G+ I ALK L E SI+ P+
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDF----LSEASIMGQFDH-PN 111
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
++RL +G GR + +V EYM+ L ++R+ G+ + + ++ + G
Sbjct: 112 IIRL----EGVVTRGRLAM-IVTEYMENGSLDTFLRT--HDGQ-FTIMQLVGMLRGVGAG 163
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRA 181
+ + G +HRDL N+L+D + K++D GL+R P YT + + + A
Sbjct: 164 MRYLSDLGYVHRDLAARNVLVD-SNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTA 222
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVT 209
PE + T +S+A D+WS + E++
Sbjct: 223 PEAIAFRT-FSSASDVWSFGVVMWEVLA 249
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 101/233 (43%), Gaps = 41/233 (17%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKT-------RLHEDDEGVPPTTLREVSILRML-- 60
+++G G++G VY+ + + L T + +++ GV T R V+IL +
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGY 88
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT--DLKKYIRSFRQTGENIPVNTVKSLM 118
S P + + +G + LY +T ++KK I RQT
Sbjct: 89 STAPQLAIVTQWCEG------SSLYHHLHASETKFEMKKLIDIARQT------------- 129
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT-- 176
+G+ + H I+HRDLK +N+ + T+KI D GLA + + E L+
Sbjct: 130 ---ARGMDYLHAKSIIHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRWSGSHQFEQLSGS 185
Query: 177 -LWYRAPEV--LLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHI 226
LW APEV + S YS D+++ + EL+T + + Q++ +
Sbjct: 186 ILWM-APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 28/207 (13%)
Query: 11 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLS-RDPHVVRL 69
++G G++G+V+R +K TG A+KK RL R ++ P +V L
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLE---------VFRAEELMACAGLTSPRIVPL 150
Query: 70 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 129
G +EG V + L + ++ + G +P + + Q +G+ + H
Sbjct: 151 Y----GAVREGPWVNIFMELLEGGSLGQLVK---EQG-CLPEDRALYYLGQALEGLEYLH 202
Query: 130 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY-------RAP 182
ILH D+K N+L+ + D G A L +LT Y AP
Sbjct: 203 SRRILHGDVKADNVLLSSDGSHAALCDFG--HAVCLQPDGLGKSLLTGDYIPGTETHMAP 260
Query: 183 EVLLGSTHYSTAVDMWSVACIFAELVT 209
EV+LG + VD+WS C+ ++
Sbjct: 261 EVVLGRS-CDAKVDVWSSCCMMLHMLN 286
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 27/209 (12%)
Query: 12 VGEGTYGKVYRAREKATGK---IVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
+G G +G+V R K GK VA+K ++ E L E SI+ P+++
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT-EKQRRDFLGEASIMGQFDH-PNIIH 87
Query: 69 LMDVKQGQNKEGRTVLYLVFEYM-----DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCK 123
L +G + + V+ +V EYM DT LKK F V + ++ +
Sbjct: 88 L----EGVVTKSKPVM-IVTEYMENGSLDTFLKKNDGQFT-------VIQLVGMLRGISA 135
Query: 124 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYR 180
G+ + G +HRDL N+L++ + K++D GL+R P YT + + +
Sbjct: 136 GMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 194
Query: 181 APEVLLGSTHYSTAVDMWSVACIFAELVT 209
APE + +++A D+WS + E+V+
Sbjct: 195 APEA-IAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 123 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA---FTLPIKKYTHEILTLWY 179
G+ F H + +HRD+K N+L+D + T KI+D GLARA F + + + T Y
Sbjct: 135 NGINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVXX-SRIVGTTAY 192
Query: 180 RAPEVLLGSTHYSTAVDMWSVACIFAELVT 209
APE L G + D++S + E++T
Sbjct: 193 XAPEALRGEI--TPKSDIYSFGVVLLEIIT 220
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 12 VGEGTYGKVYRAREKATGK---IVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
VG G +G+V R K K VA+K ++ E L E SI+ P+++R
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDH-PNIIR 110
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSF-RQTGENIPVNTVKSLMYQLCKGVAF 127
L +G + + V+ +V EYM+ + SF R+ V + ++ + G+ +
Sbjct: 111 L----EGVVTKSKPVM-IVTEYMENG---SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 128 CHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEV 184
G +HRDL N+L++ + K++D GLAR P YT + + + +PE
Sbjct: 163 LSDMGYVHRDLAARNILIN-SNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 185 LLGSTHYSTAVDMWSVACIFAELVT 209
+ +++A D+WS + E+++
Sbjct: 222 -IAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 107 ENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTL 165
E I + + S +Q+ +G+ F +HRDL N+L+ + +KI D GLAR +
Sbjct: 194 EPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNV-VKICDFGLARDIYKN 252
Query: 166 P--IKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG---DSE 219
P ++K + W APE + YST D+WS + E+ + + +PG D +
Sbjct: 253 PDYVRKGDTRLPLKWM-APESIFDKI-YSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDED 310
Query: 220 LQQLLHIFRLLGTPNEKVWPGVSSLM--NWHEYPQWNPQ 256
L + P E P + +M WH P+ P+
Sbjct: 311 FCSRLREGMRMRAP-EYSTPEIYQIMLDCWHRDPKERPR 348
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 42/245 (17%)
Query: 2 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILR-ML 60
+ + ++++G+G YG+V+ + + G+ VA+K E+ + RE I + +L
Sbjct: 35 IAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEE-----ASWFRETEIYQTVL 87
Query: 61 SRDPHVVRLM--DVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSL 117
R +++ + D+K T LYL+ +Y + L Y++S + ++ L
Sbjct: 88 MRHENILGFIAADIK---GTGSWTQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKL 139
Query: 118 MYQLCKGVAFCHGH----------GILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPI 167
Y G+ CH H I HRDLK N+L+ +K T IADLGLA F
Sbjct: 140 AYSSVSGL--CHLHTEIFSTQGKPAIAHRDLKSKNILV-KKNGTCCIADLGLAVKFISDT 196
Query: 168 KKY----THEILTLWYRAPEVL---LGSTHYSTAV--DMWSVACIFAELVTKTALFPGDS 218
+ + T Y PEVL L H+ + + DM+S I E V + + G
Sbjct: 197 NEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWE-VARRCVSGGIV 255
Query: 219 ELQQL 223
E QL
Sbjct: 256 EEYQL 260
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 12 VGEGTYGKVYRAREKATGK---IVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
VG G +G+V R K K VA+K ++ E L E SI+ P+++R
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDH-PNIIR 110
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSF-RQTGENIPVNTVKSLMYQLCKGVAF 127
L +G + + V+ +V EYM+ + SF R+ V + ++ + G+ +
Sbjct: 111 L----EGVVTKSKPVM-IVTEYMENG---SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 128 CHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEV 184
G +HRDL N+L++ + K++D GL+R P YT + + + +PE
Sbjct: 163 LSDMGFVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 185 LLGSTHYSTAVDMWSVACIFAELVT 209
+ +++A D+WS + E+++
Sbjct: 222 -IAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 22/233 (9%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKTRL--HEDDEGVPPTTLREVSILRMLSRDPHVV 67
+++G G +G V + + + + L +D + L E ++++ L +P++V
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIV 75
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
R++ + + ++ LV E + L KY++ R + + L++Q+ G+
Sbjct: 76 RMIGICEAES------WMLVMEMAELGPLNKYLQQNRHVKDK----NIIELVHQVSMGMK 125
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAPE 183
+ +HRDL N+L+ + KI+D GL++A Y + W + APE
Sbjct: 126 YLEESNFVHRDLAARNVLLVTQHYA-KISDFGLSKALRADENXYKAQTHGKWPVKWYAPE 184
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVT---KTALFPGDSELQQLLHIFRLLGTP 233
+ +S+ D+WS + E + K SE+ +L +G P
Sbjct: 185 C-INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 236
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 22/233 (9%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKTRLHE--DDEGVPPTTLREVSILRMLSRDPHVV 67
+++G G +G V + + + + L +D + L E ++++ L +P++V
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIV 91
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
R++ + + ++ LV E + L KY++ R + + L++Q+ G+
Sbjct: 92 RMIGICEAES------WMLVMEMAELGPLNKYLQQNRHVKDK----NIIELVHQVSMGMK 141
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAPE 183
+ +HRDL N+L+ + KI+D GL++A Y + W + APE
Sbjct: 142 YLEESNFVHRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 200
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVT---KTALFPGDSELQQLLHIFRLLGTP 233
+ +S+ D+WS + E + K SE+ +L +G P
Sbjct: 201 C-INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 252
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 22/233 (9%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKTRLHE--DDEGVPPTTLREVSILRMLSRDPHVV 67
+++G G +G V + + + + L +D + L E ++++ L +P++V
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIV 91
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
R++ + + ++ LV E + L KY++ R + + L++Q+ G+
Sbjct: 92 RMIGICEAES------WMLVMEMAELGPLNKYLQQNRHVKDK----NIIELVHQVSMGMK 141
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAPE 183
+ +HRDL N+L+ + KI+D GL++A Y + W + APE
Sbjct: 142 YLEESNFVHRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 200
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVT---KTALFPGDSELQQLLHIFRLLGTP 233
+ +S+ D+WS + E + K SE+ +L +G P
Sbjct: 201 C-INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 252
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 22/233 (9%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKTRLHE--DDEGVPPTTLREVSILRMLSRDPHVV 67
+++G G +G V + + + + L +D + L E ++++ L +P++V
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIV 75
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
R++ + + ++ LV E + L KY++ R + + L++Q+ G+
Sbjct: 76 RMIGICEAES------WMLVMEMAELGPLNKYLQQNRHVKDK----NIIELVHQVSMGMK 125
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAPE 183
+ +HRDL N+L+ + KI+D GL++A Y + W + APE
Sbjct: 126 YLEESNFVHRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 184
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVT---KTALFPGDSELQQLLHIFRLLGTP 233
+ +S+ D+WS + E + K SE+ +L +G P
Sbjct: 185 C-INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 236
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 22/233 (9%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKTRLHE--DDEGVPPTTLREVSILRMLSRDPHVV 67
+++G G +G V + + + + L +D + L E ++++ L +P++V
Sbjct: 11 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIV 69
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
R++ + + ++ LV E + L KY++ R + + L++Q+ G+
Sbjct: 70 RMIGICEAES------WMLVMEMAELGPLNKYLQQNRHVKDK----NIIELVHQVSMGMK 119
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAPE 183
+ +HRDL N+L+ + KI+D GL++A Y + W + APE
Sbjct: 120 YLEESNFVHRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 178
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVT---KTALFPGDSELQQLLHIFRLLGTP 233
+ +S+ D+WS + E + K SE+ +L +G P
Sbjct: 179 C-INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 230
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 12 VGEGTYGKVYRAREKATGK---IVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
VG G +G+V R K K VA+K ++ E L E SI+ P+++R
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDH-PNIIR 110
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSF-RQTGENIPVNTVKSLMYQLCKGVAF 127
L +G + + V+ +V EYM+ + SF R+ V + ++ + G+ +
Sbjct: 111 L----EGVVTKSKPVM-IVTEYMENG---SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 128 CHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEV 184
G +HRDL N+L++ + K++D GL+R P YT + + + +PE
Sbjct: 163 LSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 185 LLGSTHYSTAVDMWSVACIFAELVT 209
+ +++A D+WS + E+++
Sbjct: 222 -IAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 12 VGEGTYGKVYRAREKATGK---IVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
VG G +G+V R K K VA+K ++ E L E SI+ P+++R
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDH-PNIIR 110
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSF-RQTGENIPVNTVKSLMYQLCKGVAF 127
L +G + + V+ +V EYM+ + SF R+ V + ++ + G+ +
Sbjct: 111 L----EGVVTKSKPVM-IVTEYMENG---SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 128 CHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEV 184
G +HRDL N+L++ + K++D GL+R P YT + + + +PE
Sbjct: 163 LSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 185 LLGSTHYSTAVDMWSVACIFAELVT 209
+ +++A D+WS + E+++
Sbjct: 222 -IAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 12 VGEGTYGKVYRAREKATGK---IVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
VG G +G+V R K K VA+K ++ E L E SI+ P+++R
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDH-PNIIR 110
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSF-RQTGENIPVNTVKSLMYQLCKGVAF 127
L +G + + V+ +V EYM+ + SF R+ V + ++ + G+ +
Sbjct: 111 L----EGVVTKSKPVM-IVTEYMENG---SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 128 CHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEV 184
G +HRDL N+L++ + K++D GL+R P YT + + + +PE
Sbjct: 163 LSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 185 LLGSTHYSTAVDMWSVACIFAELVT 209
+ +++A D+WS + E+++
Sbjct: 222 -IAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 22/233 (9%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKTRLHE--DDEGVPPTTLREVSILRMLSRDPHVV 67
+++G G +G V + + + + L +D + L E ++++ L +P++V
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIV 71
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
R++ + + ++ LV E + L KY++ R + + L++Q+ G+
Sbjct: 72 RMIGICEAES------WMLVMEMAELGPLNKYLQQNRHVKDK----NIIELVHQVSMGMK 121
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAPE 183
+ +HRDL N+L+ + KI+D GL++A Y + W + APE
Sbjct: 122 YLEESNFVHRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 180
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVT---KTALFPGDSELQQLLHIFRLLGTP 233
+ +S+ D+WS + E + K SE+ +L +G P
Sbjct: 181 C-INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 232
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 12 VGEGTYGKVYRAREKATGK---IVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
VG G +G+V R K K VA+K ++ E L E SI+ P+++R
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDH-PNIIR 81
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSF-RQTGENIPVNTVKSLMYQLCKGVAF 127
L +G + + V+ +V EYM+ + SF R+ V + ++ + G+ +
Sbjct: 82 L----EGVVTKSKPVM-IVTEYMENG---SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 128 CHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEV 184
G +HRDL N+L++ + K++D GL+R P YT + + + +PE
Sbjct: 134 LSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 192
Query: 185 LLGSTHYSTAVDMWSVACIFAELVT 209
+ +++A D+WS + E+++
Sbjct: 193 -IAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 12 VGEGTYGKVYRAREKATGK---IVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
VG G +G+V R K K VA+K ++ E L E SI+ P+++R
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDH-PNIIR 110
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSF-RQTGENIPVNTVKSLMYQLCKGVAF 127
L +G + + V+ +V EYM+ + SF R+ V + ++ + G+ +
Sbjct: 111 L----EGVVTKSKPVM-IVTEYMENG---SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 128 CHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEV 184
G +HRDL N+L++ + K++D GL+R P YT + + + +PE
Sbjct: 163 LSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 185 LLGSTHYSTAVDMWSVACIFAELVT 209
+ +++A D+WS + E+++
Sbjct: 222 -IAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 22/233 (9%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKTRL--HEDDEGVPPTTLREVSILRMLSRDPHVV 67
+++G G +G V + + + + L +D + L E ++++ L +P++V
Sbjct: 31 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIV 89
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
R++ + + ++ LV E + L KY++ R + + L++Q+ G+
Sbjct: 90 RMIGICEAES------WMLVMEMAELGPLNKYLQQNRHVKDK----NIIELVHQVSMGMK 139
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAPE 183
+ +HRDL N+L+ + KI+D GL++A Y + W + APE
Sbjct: 140 YLEESNFVHRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 198
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVT---KTALFPGDSELQQLLHIFRLLGTP 233
+ +S+ D+WS + E + K SE+ +L +G P
Sbjct: 199 C-INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 250
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 12 VGEGTYGKVYRAREKATGK---IVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
VG G +G+V R K K VA+K ++ E L E SI+ P+++R
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDH-PNIIR 108
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSF-RQTGENIPVNTVKSLMYQLCKGVAF 127
L +G + + V+ +V EYM+ + SF R+ V + ++ + G+ +
Sbjct: 109 L----EGVVTKSKPVM-IVTEYMENG---SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 160
Query: 128 CHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEV 184
G +HRDL N+L++ + K++D GL+R P YT + + + +PE
Sbjct: 161 LSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 219
Query: 185 LLGSTHYSTAVDMWSVACIFAELVT 209
+ +++A D+WS + E+++
Sbjct: 220 -IAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 22/233 (9%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKTRL--HEDDEGVPPTTLREVSILRMLSRDPHVV 67
+++G G +G V + + + + L +D + L E ++++ L +P++V
Sbjct: 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIV 81
Query: 68 RLMDVKQGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVA 126
R++ + + ++ LV E + L KY++ R + + L++Q+ G+
Sbjct: 82 RMIGICEAES------WMLVMEMAELGPLNKYLQQNRHVKDK----NIIELVHQVSMGMK 131
Query: 127 FCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAPE 183
+ +HRDL N+L+ + KI+D GL++A Y + W + APE
Sbjct: 132 YLEESNFVHRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 190
Query: 184 VLLGSTHYSTAVDMWSVACIFAELVT---KTALFPGDSELQQLLHIFRLLGTP 233
+ +S+ D+WS + E + K SE+ +L +G P
Sbjct: 191 C-INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 242
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 32/165 (19%)
Query: 6 FEKLEK---VGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSR 62
FE+LE +G+G +G+VY R VA++ + D+E REV R +R
Sbjct: 32 FEQLEIGELIGKGRFGQVYHGRWHGE---VAIRLIDIERDNEDQLKAFKREVMAYRQ-TR 87
Query: 63 DPHVVRLMDVKQGQNK--------EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTV 114
+VV M +GRT+ +V R + VN
Sbjct: 88 HENVVLFMGACMSPPHLAIITSLCKGRTLYSVV---------------RDAKIVLDVNKT 132
Query: 115 KSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGL 159
+ + ++ KG+ + H GILH+DLK N+ D + I D GL
Sbjct: 133 RQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVV--ITDFGL 175
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 41/216 (18%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKT-------RLHEDDEGVPPTTLREVSILRML-- 60
+++G G++G VY+ + + L T + +++ GV T R V+IL +
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGY 72
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT--DLKKYIRSFRQTGENIPVNTVKSLM 118
S P + + +G + LY ++T ++ K I RQT +
Sbjct: 73 STKPQLAIVTQWCEGSS------LYHHLHIIETKFEMIKLIDIARQTAQ----------- 115
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT-- 176
G+ + H I+HRDLK +N+ + + +T+KI D GLA + + E L+
Sbjct: 116 -----GMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 169
Query: 177 -LWYRAPEV--LLGSTHYSTAVDMWSVACIFAELVT 209
LW APEV + YS D+++ + EL+T
Sbjct: 170 ILWM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 15/216 (6%)
Query: 4 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD 63
D F +G G +GKVY+ R A G +VA+K+ + E +G EV ++ M +
Sbjct: 38 DNFSNKNILGRGGFGKVYKGR-LADGTLVAVKRLK-EERXQGGELQFQTEVEMISM-AVH 94
Query: 64 PHVVRLMDVKQGQNKEGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLC 122
+++RL T LV+ YM + + +R ++ + + +
Sbjct: 95 RNLLRLRGFCMTP-----TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSA 149
Query: 123 KGVAFCHGH---GILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLW 178
+G+A+ H H I+HRD+K N+L+D + + + D GLA+ + T+
Sbjct: 150 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGTIG 208
Query: 179 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALF 214
+ APE L + S D++ + EL+T F
Sbjct: 209 HIAPEY-LSTGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 41/216 (18%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKT-------RLHEDDEGVPPTTLREVSILRML-- 60
+++G G++G VY+ + + L T + +++ GV T R V+IL +
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGY 77
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT--DLKKYIRSFRQTGENIPVNTVKSLM 118
S P + + +G + LY ++T ++ K I RQT +
Sbjct: 78 STKPQLAIVTQWCEGSS------LYHHLHIIETKFEMIKLIDIARQTAQ----------- 120
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT-- 176
G+ + H I+HRDLK +N+ + + +T+KI D GLA + + E L+
Sbjct: 121 -----GMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 174
Query: 177 -LWYRAPEV--LLGSTHYSTAVDMWSVACIFAELVT 209
LW APEV + YS D+++ + EL+T
Sbjct: 175 ILWM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 12 VGEGTYGKVYRAREKATGK------IVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPH 65
+G G G+V R + G+ I ALK L E SI+ P+
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDF----LSEASIMGQFDH-PN 111
Query: 66 VVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKG 124
++RL +G GR + +V EYM+ L ++R+ G+ + + ++ + G
Sbjct: 112 IIRL----EGVVTRGRLAM-IVTEYMENGSLDTFLRT--HDGQ-FTIMQLVGMLRGVGAG 163
Query: 125 VAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT---LPIKKYTHEILTLWYRA 181
+ + G +HRDL N+L+D + K++D GL+R T + + + A
Sbjct: 164 MRYLSDLGYVHRDLAARNVLVD-SNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTA 222
Query: 182 PEVLLGSTHYSTAVDMWSVACIFAELVT 209
PE + T +S+A D+WS + E++
Sbjct: 223 PEAIAFRT-FSSASDVWSFGVVMWEVLA 249
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 12 VGEGTYGKVYRAREKATGK---IVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVR 68
VG G +G+V R K K VA+K ++ E L E SI+ P+++R
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDH-PNIIR 98
Query: 69 LMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSF-RQTGENIPVNTVKSLMYQLCKGVAF 127
L +G + + V+ +V EYM+ + SF R+ V + ++ + G+ +
Sbjct: 99 L----EGVVTKSKPVM-IVTEYMENG---SLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 150
Query: 128 CHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEV 184
G +HRDL N+L++ + K++D GL+R P YT + + + +PE
Sbjct: 151 LSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 209
Query: 185 LLGSTHYSTAVDMWSVACIFAELVT 209
+ +++A D+WS + E+++
Sbjct: 210 -IAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 41/216 (18%)
Query: 10 EKVGEGTYGKVYRAREKATGKIVALKKT-------RLHEDDEGVPPTTLREVSILRML-- 60
+++G G++G VY+ + + L T + +++ GV T R V+IL +
Sbjct: 16 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGY 74
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT--DLKKYIRSFRQTGENIPVNTVKSLM 118
S P + + +G + LY ++T ++ K I RQT +
Sbjct: 75 STKPQLAIVTQWCEGSS------LYHHLHIIETKFEMIKLIDIARQTAQ----------- 117
Query: 119 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT-- 176
G+ + H I+HRDLK +N+ + + +T+KI D GLA + + E L+
Sbjct: 118 -----GMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 171
Query: 177 -LWYRAPEV--LLGSTHYSTAVDMWSVACIFAELVT 209
LW APEV + YS D+++ + EL+T
Sbjct: 172 ILWM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 206
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 39/234 (16%)
Query: 5 AFEKLEKVGEGTYGKVYRAR---EKATGKIVALK-KTRLHEDDEGVPPTTLREVSILRML 60
+ + LE G +G V++A+ + KI L+ K + E ++ ++L+ +
Sbjct: 16 SLQLLEIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFI 75
Query: 61 SRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMY 119
+ + K+G N E L+L+ + D L Y++ G I N + +
Sbjct: 76 AAE---------KRGSNLE--VELWLITAFHDKGSLTDYLK-----GNIITWNELCHVAE 119
Query: 120 QLCKGVAF-------CHGHG----ILHRDLKPHNLLMDRKTMTLKIADLGLARAFT--LP 166
+ +G+++ C G G I HRD K N+L+ + +T +AD GLA F P
Sbjct: 120 TMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLL-KSDLTAVLADFGLAVRFEPGKP 178
Query: 167 IKKYTHEILTLWYRAPEVLLGSTHYST----AVDMWSVACIFAELVTKTALFPG 216
++ T Y APEVL G+ ++ +DM+++ + ELV++ G
Sbjct: 179 PGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADG 232
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,406,089
Number of Sequences: 62578
Number of extensions: 395444
Number of successful extensions: 3998
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 255
Number of HSP's that attempted gapping in prelim test: 975
Number of HSP's gapped (non-prelim): 1210
length of query: 304
length of database: 14,973,337
effective HSP length: 98
effective length of query: 206
effective length of database: 8,840,693
effective search space: 1821182758
effective search space used: 1821182758
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)