Query 021985
Match_columns 304
No_of_seqs 127 out of 620
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 12:16:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021985.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021985hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4frf_A Inositol polyphosphate 100.0 5E-80 1.7E-84 572.8 17.6 270 7-285 3-274 (275)
2 2iew_A Inositol polyphosphate 100.0 2.7E-72 9.4E-77 538.3 17.2 260 2-283 7-362 (363)
3 2aqx_A Predicted: inositol 1,4 100.0 5.6E-67 1.9E-71 485.9 12.3 224 4-279 15-289 (289)
4 1w2f_A Inositol-trisphosphate 100.0 2.9E-66 1E-70 478.9 12.3 223 5-279 2-276 (276)
5 2a98_A Inositol 1,4,5-trisphos 100.0 1.7E-62 5.7E-67 450.2 14.5 209 25-279 1-259 (259)
6 2ybx_A Phosphatidylinositol-5- 87.6 0.44 1.5E-05 45.7 4.3 75 24-105 127-205 (394)
7 2gk9_A Phosphatidylinositol-4- 87.5 0.47 1.6E-05 45.4 4.5 73 24-103 116-192 (392)
8 3owt_C Regulatory protein SIR3 63.6 2.3 7.8E-05 24.2 0.8 12 240-251 3-14 (27)
9 3aon_B V-type sodium ATPase su 17.9 28 0.00096 27.1 0.2 31 130-175 13-43 (115)
10 2d00_A V-type ATP synthase sub 15.4 29 0.001 26.7 -0.3 30 131-175 15-44 (109)
No 1
>4frf_A Inositol polyphosphate multikinase alpha; ATP grAsp, inositol phosphate kinase, transferase; 2.90A {Arabidopsis thaliana}
Probab=100.00 E-value=5e-80 Score=572.83 Aligned_cols=270 Identities=59% Similarity=1.073 Sum_probs=200.0
Q ss_pred ccccCCCCCCCCCCcccCCCceeEeeccCCCCCcHHHHHHHHHhcCCCCccccccccccceEEEEeecCCCCCCcCeEEe
Q 021985 7 HQVAGHKAGKGKLGPLVDDSGCFYKPYQCDDRGSKEVAFYTSFSSNTKIPAHIRRFFPVFYGTKLVEASDGSGLSPHIVL 86 (304)
Q Consensus 7 ~QvaGH~~~~~~~g~l~~~~g~i~Kp~~~~~r~~~E~~FY~~l~~~~~~~~~L~~f~P~y~G~~~~~~~~~~~~~~~I~L 86 (304)
||++||. |+|++++|+|+||+++++||++|++||++++.+++.+..|++|||+|+|++.++..+ ...||+|
T Consensus 3 ~~~~Gh~------G~l~~~~G~v~KP~~~~~rg~~E~~FYe~l~~~~~~~~~L~~fvP~y~G~~~~~~~~---~~~~i~L 73 (275)
T 4frf_A 3 HMKDGKP------GPLVDDKGRFFKPLQGDSRGEIEVKFYESFSSNTEVPEHIHRYFPVYHGTQAVEGSD---GAAMMVL 73 (275)
T ss_dssp ---------------------------------CCHHHHHHHHHHCTTSCHHHHTTSCCBCCC-------------CCCB
T ss_pred CCCCCCC------CceECCCCcEEeecCCCCcchHHHHHHHHHhhCCCchHHHHhhCcCCceeEEecCCC---CccEEEE
Confidence 6778876 799999999999999999999999999999887766678999999999999876543 3569999
Q ss_pred cccccCCCCCcEEEeeecceecCCCCCHHHHHHHhhhcccCCcceecEEEeeeeeeecCCCcccccchhhhcccChHHHH
Q 021985 87 QDLVSNRNNPSIMDIKIGARTWYPQASDDYIERCFQKDRETTTSLLGFRISGLQIYENKESGFWKPVKKLVQAFNVEDVQ 166 (304)
Q Consensus 87 edLt~gf~~PcVlDiKmG~rt~~~~as~eK~~r~~~k~~~tTs~~lGfRi~Gm~v~~~~~~~~~~~~K~~Gr~lt~e~~~ 166 (304)
||||+||++|||||||||+|||+|+||+||++|+.+|++.|||++||||||||++|+.+++.|++.+|+|||+++.+++.
T Consensus 74 EdLt~gf~~PcVlDiKmG~Rt~~~~as~eK~~~~~~k~~~tTs~sLGfRi~Gm~vy~~~~~~~~~~dK~~Gr~l~~~~~~ 153 (275)
T 4frf_A 74 ENLLAEYTKPSVMDVKMGSRTWYPDASEEYIQKCLKKDTGTTTVSSGFRISGFEVYDHKESSFWKPERKLLRGLDVDGAR 153 (275)
T ss_dssp CCGGGGCSSEEEEEEEECSSSCCTTSCHHHHHHHHHHHTTSHHHHSSEEEEEEEEEETTTTEEECCCHHHHHTCCHHHHH
T ss_pred eecccccCCCceeEeeeecEEcCCCCCHHHHHHHHHhcccccccccceEEEEEEEecCCCCcceecchhHhccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCCCCCCCCCCCccccCChhHHHHHHHHHHHHHHhCCeeEEeeeeeEEEEecCcccCC--CCCCCceE
Q 021985 167 LVLRKFVSSNSPTDSNSVPDCSFAPSVYGGSSGILAQLLELKEWFEDQTIYNLNSCSVLMVYEKESLLKG--TSPGAEIK 244 (304)
Q Consensus 167 ~~l~~Ff~~~~~~~~~~~~~~~~~~~v~~~i~~~l~~L~~l~~~~~~q~~~rf~sSSLLivYD~~~~~~~--~~~~v~Vr 244 (304)
++|.+||+++.......++++.+...++..++.+|+||++|++||++|..||||||||||||||+....+ .+..++||
T Consensus 154 ~~l~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~l~~~~e~~~~~rfysSSLL~vYD~~~~~~~~~~~~~~~vr 233 (275)
T 4frf_A 154 LTLRKFVSSNSLSDTGSKPDSAFASSVYGGSHGILTQLLELKTWFENQTLYHFNSCSILMVYENESILKGNDDDARPQVK 233 (275)
T ss_dssp HHHHHTTCSCCC------CCCCCHHHHTSSTTSHHHHHHHHHHHHHHCCSEECCSEEEEEEEECCC-------CCCCEEE
T ss_pred HHHHHHhcCCccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHhcCceEEEecceeeEecCcccccccCCCCcccEE
Confidence 9999999987655433334444444454446779999999999999999999999999999999875432 23679999
Q ss_pred EEecCCCcCCCCCCCchHHHHHHHHHHHHHHHHcCCcccCC
Q 021985 245 LVDFAHVIEGTGIIDHNFLGGLCSLIKIISEILTGPDEHTN 285 (304)
Q Consensus 245 lIDFAh~~~~~~~~D~g~l~GL~nLi~il~~i~~~~~~~~~ 285 (304)
||||||+++.++.+|+|||+||+|||++|++|+++..++.+
T Consensus 234 mIDFAh~~~~~~~~D~gyl~GL~nLi~~l~~il~~~~~~~~ 274 (275)
T 4frf_A 234 LVDFAHVLDGNGVIDHNFLGGLCSFINFIREILQSPDESAD 274 (275)
T ss_dssp EECCTTCEECCSCCCHHHHHHHHHHHHHHHHHC--------
T ss_pred EEECCCCCCCCCCCCccHHHHHHHHHHHHHHHHhccccCCC
Confidence 99999999988889999999999999999999999887654
No 2
>2iew_A Inositol polyphosphate multikinase; ATP-grAsp fold related, transferase; 2.00A {Saccharomyces cerevisiae} PDB: 2if8_A*
Probab=100.00 E-value=2.7e-72 Score=538.33 Aligned_cols=260 Identities=25% Similarity=0.363 Sum_probs=198.6
Q ss_pred CCCCCccccCCCCCCCCCCcccC-CCceeEeeccCCCCCcHHHHHHHHHhcCC--------CCccccccccccceEEEEe
Q 021985 2 LKVPDHQVAGHKAGKGKLGPLVD-DSGCFYKPYQCDDRGSKEVAFYTSFSSNT--------KIPAHIRRFFPVFYGTKLV 72 (304)
Q Consensus 2 l~~~~~QvaGH~~~~~~~g~l~~-~~g~i~Kp~~~~~r~~~E~~FY~~l~~~~--------~~~~~L~~f~P~y~G~~~~ 72 (304)
|+||.||||||. |+|++ ++++|+||++ .+|++||+.++... +.+..|++|||+|+|++.+
T Consensus 7 l~~f~hQVaGH~------g~l~~~dg~~i~Kp~~-----~~E~~FYe~l~~~~~~~~~~~~~~~~~L~~fvP~y~G~~~~ 75 (363)
T 2iew_A 7 YRVLEHKAAGHD------GTLTDGDGLLIFKPAF-----PQELEFYKAIQVRDVSRRKSSADGDAPLCSWMPTYLGVLNE 75 (363)
T ss_dssp -------------------------CCEEEEECC-----HHHHHHHHHHC------------CCCCGGGGSCCEEEEEEC
T ss_pred CcCccccccCCc------ceeEcCCCCEEeCcCC-----hHHHHHHHHHhhhcccccccccccchhHHhhCcccceeEec
Confidence 899999999997 67877 4669999998 89999999997521 1234799999999999987
Q ss_pred ecCCC---------------------------C-CCcCeEEecccccCCCCCcEEEeeecceecCCCCCHHHHHHHhhhc
Q 021985 73 EASDG---------------------------S-GLSPHIVLQDLVSNRNNPSIMDIKIGARTWYPQASDDYIERCFQKD 124 (304)
Q Consensus 73 ~~~~~---------------------------~-~~~~~I~LedLt~gf~~PcVlDiKmG~rt~~~~as~eK~~r~~~k~ 124 (304)
..... . +...||+|||||+||++|||||||||+|||+++||++|++|+.+|+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~LEdLt~gf~~PcVlDiKmG~Rt~~~~As~eK~~r~~~k~ 155 (363)
T 2iew_A 76 GAKIEQSGDAALLKIDERLSDSTDNLDSIPVKSEKSKQYLVLENLLYGFSKPNILDIKLGKTLYDSKASLEKRERMKRVS 155 (363)
T ss_dssp -----------------------------------CCEEEEEECTTTTCSSEEEEEEEECSCCCCTTCCHHHHHHHHHHH
T ss_pred ccccccccchhhcccccccccCccchhcccccCCCCccEEEechhhcCCCCceEEEEEEcCEECCCCCCHHHHHHHHHHh
Confidence 63210 0 1357999999999999999999999999999999999999999999
Q ss_pred ccCCcceecEEEeeeeeeecC---------------CCcccccchhhhcccChHHHHHHHHHhccCCCCCCCCCCCCCCC
Q 021985 125 RETTTSLLGFRISGLQIYENK---------------ESGFWKPVKKLVQAFNVEDVQLVLRKFVSSNSPTDSNSVPDCSF 189 (304)
Q Consensus 125 ~~tTs~~lGfRi~Gm~v~~~~---------------~~~~~~~~K~~Gr~lt~e~~~~~l~~Ff~~~~~~~~~~~~~~~~ 189 (304)
+.|||++||||||||++|+.. ++.|++++|+|||+++.++|.++|.+||+.+... ..+
T Consensus 156 ~~tTs~sLGfRI~Gmkv~~~~~~~~~~~~~~~~~~~~~~y~~~dK~~Gr~lt~~~~~~~l~~Ff~~~~~~-------~~~ 228 (363)
T 2iew_A 156 ETTTSGSLGFRICGMKIQKNPSVLNQLSLEYYEEEADSDYIFINKLYGRSRTDQNVSDAIELYFNNPHLS-------DAR 228 (363)
T ss_dssp HHSHHHHHSEEEEEEEEECCHHHHHHSCGGGEECCSSCSEEEECHHHHHHCCTTTHHHHHHHHHCCTTSC-------HHH
T ss_pred ccCCccccCEEEEEEEecCCCcccccccccccccccCCceeeechHhCccCCHHHHHHHHHHHhCCCCCc-------HHH
Confidence 999999999999999999983 6789999999999999999999999999764321 112
Q ss_pred CccccCChhHHHHHHHHHHHHHHhCCeeEEeeeeeEEEEecCccc---------------C----------CC-------
Q 021985 190 APSVYGGSSGILAQLLELKEWFEDQTIYNLNSCSVLMVYEKESLL---------------K----------GT------- 237 (304)
Q Consensus 190 ~~~v~~~i~~~l~~L~~l~~~~~~q~~~rf~sSSLLivYD~~~~~---------------~----------~~------- 237 (304)
+..| ++.+|+||++|++||+++. ||||||||||||||+... . .+
T Consensus 229 ~~~~---~~~~l~~L~~L~~~le~~~-~rfysSSLL~vYD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (363)
T 2iew_A 229 KHQL---KKTFLKRLQLFYNTMLEEE-VRMISSSLLFIYEGDPERWELLNDVDKLMRDDFIDDDDDDDDNDDDDDDDAEG 304 (363)
T ss_dssp HHHH---HHHHHHHHHHHHHHHHHCC-EEESSEEEEEEEECCHHHHHHTTTCCCSSCCCSCC------------------
T ss_pred HHHH---HHHHHHHHHHHHHHHHhCC-eEEEeeeEEEEEeCCcccccccccccccccccccccccccccccccccccccc
Confidence 2334 3579999999999999987 999999999999998310 0 00
Q ss_pred -----------CCCCceEEEecCCCcCCCC-CCCchHHHHHHHHHHHHHHHHcCCccc
Q 021985 238 -----------SPGAEIKLVDFAHVIEGTG-IIDHNFLGGLCSLIKIISEILTGPDEH 283 (304)
Q Consensus 238 -----------~~~v~VrlIDFAh~~~~~~-~~D~g~l~GL~nLi~il~~i~~~~~~~ 283 (304)
...|+||||||||+++..+ .+|+|||+||+|||++|++|++.-|++
T Consensus 305 ~~~~~~~~~~~~~~~~vrmIDFAH~~~~~~~g~D~g~l~GL~nLi~il~~i~~~~~~~ 362 (363)
T 2iew_A 305 SSEGPKDKKTTGSLSSMSLIDFAHSEITPGKGYDENVIEGVETLLDIFMKFLEHHHHH 362 (363)
T ss_dssp ------------CCEEEEEECCTTEEECTTSCCCHHHHHHHHHHHHHHHHHTTTCC--
T ss_pred cccccccccCCCCcceEEEEeCCCcccCCCCCCCccHHHHHHHHHHHHHHHHHHhccC
Confidence 1368999999999985332 499999999999999999999887765
No 3
>2aqx_A Predicted: inositol 1,4,5-trisphosphate 3-kinase; IP3K, ITPKB, IP3-3K, IP3-3KB, IP3, calmodu binding, transferase; HET: ATP; 2.50A {Mus musculus}
Probab=100.00 E-value=5.6e-67 Score=485.94 Aligned_cols=224 Identities=24% Similarity=0.427 Sum_probs=196.3
Q ss_pred CCCccccCCCCCCCCCCcc-cCCCceeEeeccCCCCCcHHHHHHHHHhcCCCCccccccccccceEEEEeecCCCCCCcC
Q 021985 4 VPDHQVAGHKAGKGKLGPL-VDDSGCFYKPYQCDDRGSKEVAFYTSFSSNTKIPAHIRRFFPVFYGTKLVEASDGSGLSP 82 (304)
Q Consensus 4 ~~~~QvaGH~~~~~~~g~l-~~~~g~i~Kp~~~~~r~~~E~~FY~~l~~~~~~~~~L~~f~P~y~G~~~~~~~~~~~~~~ 82 (304)
+.+||||||.+ .+ ..++|+|+||++ .+|++||+.++.+ .|++|+|+|+|+++.++ ..
T Consensus 15 ~~~~QvaGH~g------~~~~~~~G~i~Kp~~-----~~E~~fYe~l~~~-----~L~~fvP~y~G~~~~~~------~~ 72 (289)
T 2aqx_A 15 YPWIQLAGHAG------SFKAAANGRILKKHC-----ESEQRCLDRLMAD-----VLRPFVPAYHGDVVKDG------ER 72 (289)
T ss_dssp EECCCCSSCTT------SEEECSTTEEEEECC-----HHHHHHHHHHTTS-----TTGGGSCCEEEEEEETT------EE
T ss_pred CCcEEeeCCCC------cceECCCCEEEeeCc-----HHHHHHHHHHhhh-----hhHHhCchheEeeccCC------ce
Confidence 56899999994 55 456899999998 8999999999764 69999999999998754 36
Q ss_pred eEEecccccCCCCCcEEEeeecceecCCC-------------------------C--CHHHHHHHhhh-------cccCC
Q 021985 83 HIVLQDLVSNRNNPSIMDIKIGARTWYPQ-------------------------A--SDDYIERCFQK-------DRETT 128 (304)
Q Consensus 83 ~I~LedLt~gf~~PcVlDiKmG~rt~~~~-------------------------a--s~eK~~r~~~k-------~~~tT 128 (304)
||+|||||+||++|||||||||+|||+++ | ++||++++..| +..||
T Consensus 73 ~i~LEDLt~gf~~PcVmDiKmG~Rt~~~~e~~kA~~~p~~r~d~y~Kmi~~dp~apt~eek~~~~~~K~rym~~r~~~tT 152 (289)
T 2aqx_A 73 YNQMDDLLADFDSPCVMDCKMGVRTYLEEELTKARKKPSLRKDMYQKMVEVDPEAPTEEEKAQRAVTKPRYMQWRETISS 152 (289)
T ss_dssp EEEEECTTTTCSSCEEEEEEESSCSSCHHHHHHHTTSCCCBHHHHHHHHHHCTTCSCHHHHHHTCBCHHHHHHHHTTSSS
T ss_pred EEEehhhhcCCCCceEEEEeEeeeEcCcccchhhhccchhhhhhhhhhhccCccCCccHHHHHHHHhhhhhhhcccccCC
Confidence 99999999999999999999999999987 2 67788777666 67899
Q ss_pred cceecEEEeeeeeeecCCCcccccchhhhcccChHHHHHHHHHhccCCCCCCCCCCCCCCCCccccCChhHHHHHHHHHH
Q 021985 129 TSLLGFRISGLQIYENKESGFWKPVKKLVQAFNVEDVQLVLRKFVSSNSPTDSNSVPDCSFAPSVYGGSSGILAQLLELK 208 (304)
Q Consensus 129 s~~lGfRi~Gm~v~~~~~~~~~~~~K~~Gr~lt~e~~~~~l~~Ff~~~~~~~~~~~~~~~~~~~v~~~i~~~l~~L~~l~ 208 (304)
|+++|||||||++|+.+ .+|+|||.++.+++.++|..||+.+. .+ ++.+|+||++|+
T Consensus 153 s~~LGfRI~G~kv~~~~------~~K~~gr~~t~e~~~~~l~~F~~~~~--------------~i---~~~~l~~L~~l~ 209 (289)
T 2aqx_A 153 TATLGFRIEGIKKEDGS------VNRDFKKTKTREQVTEAFREFTKGNQ--------------NI---LIAYRDRLKAIR 209 (289)
T ss_dssp HHHHSEEEEEEECTTSC------EECCCTTCCSHHHHHHHHHHHHTTCH--------------HH---HHHHHHHHHHHH
T ss_pred cccCCEEEEEEEecCCC------CCCcccccCCHHHHHHHHHHHhcCcH--------------HH---HHHHHHHHHHHH
Confidence 99999999999999865 68999999999999999999998642 12 367999999999
Q ss_pred HHHHhCCeeE---EeeeeeEEEEecCcccCCCCCCCceEEEecCCCcCC-------------CCCCCchHHHHHHHHHHH
Q 021985 209 EWFEDQTIYN---LNSCSVLMVYEKESLLKGTSPGAEIKLVDFAHVIEG-------------TGIIDHNFLGGLCSLIKI 272 (304)
Q Consensus 209 ~~~~~q~~~r---f~sSSLLivYD~~~~~~~~~~~v~VrlIDFAh~~~~-------------~~~~D~g~l~GL~nLi~i 272 (304)
+||+++..|+ |||||||||||++. .++||||||||+++. ++.+|+|||+||+|||++
T Consensus 210 ~~~e~~~~f~~~~f~sSSLL~vYD~~~-------~~~v~mIDFAh~~~~~~~~~~~h~~~~~~g~~D~gyL~GL~nLi~i 282 (289)
T 2aqx_A 210 ATLEISPFFKCHEVIGSSLLFIHDKKE-------QAKVWMIDFGKTTPLPEGQTLQHDVPWQEGNREDGYLSGLDNLIDI 282 (289)
T ss_dssp HHHTTCHHHHTEEECSCEEEEEECTTC-------CEEEEEECCTTEEECSTTCCCCSSSCCCTTSCCCCHHHHHHHHHHH
T ss_pred HHHHhCccccccEEEeeeEEEEEeCCC-------cCcEEEEECCceeEcCCCccccCCCCccCCCCCchHHHHHHHHHHH
Confidence 9999998766 99999999999974 599999999999752 135899999999999999
Q ss_pred HHHHHcC
Q 021985 273 ISEILTG 279 (304)
Q Consensus 273 l~~i~~~ 279 (304)
|++|+++
T Consensus 283 l~~i~~~ 289 (289)
T 2aqx_A 283 LTEMSQG 289 (289)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9999864
No 4
>1w2f_A Inositol-trisphosphate 3-kinase A; inositol phosphate kinase, transferase, calmodulin-binding; 1.8A {Homo sapiens} SCOP: d.143.1.3 PDB: 1tzd_A* 1w2d_A* 1w2c_A*
Probab=100.00 E-value=2.9e-66 Score=478.95 Aligned_cols=223 Identities=24% Similarity=0.394 Sum_probs=192.4
Q ss_pred CCccccCCCCCCCCCCcccC--CCceeEeeccCCCCCcHHHHHHHHHhcCCCCccccccccccceEEEEeecCCCCCCcC
Q 021985 5 PDHQVAGHKAGKGKLGPLVD--DSGCFYKPYQCDDRGSKEVAFYTSFSSNTKIPAHIRRFFPVFYGTKLVEASDGSGLSP 82 (304)
Q Consensus 5 ~~~QvaGH~~~~~~~g~l~~--~~g~i~Kp~~~~~r~~~E~~FY~~l~~~~~~~~~L~~f~P~y~G~~~~~~~~~~~~~~ 82 (304)
.+||||||. |++++ ++|+|+||++ .+|++||+.++.+ .|++|+|+|+|+++.++ ..
T Consensus 2 ~~~QvaGH~------g~l~~~~~~g~i~Kp~~-----~~E~~fY~~l~~~-----~L~~fvP~y~G~~~~~~------~~ 59 (276)
T 1w2f_A 2 SWVQLAGHT------GSFKAAGTSGLILKRCS-----EPERYCLARLMAD-----ALRGCVPAFHGVVERDG------ES 59 (276)
T ss_dssp CHHHHTTCC------SCCEECSSTTEEEEECC-----HHHHHHHHHHHTS-----GGGGGSCCEEEEEEETT------EE
T ss_pred CCeEEeCCC------CceeecCCCCEEEeeCC-----HHHHHHHHHhhhh-----hHHHhChhhheeeccCC------ce
Confidence 479999999 57777 5899999998 8999999999764 79999999999988754 46
Q ss_pred eEEecccccCCCCCcEEEeeecceecCCCCC---------------------------HHHHHHHhhh-------cccCC
Q 021985 83 HIVLQDLVSNRNNPSIMDIKIGARTWYPQAS---------------------------DDYIERCFQK-------DRETT 128 (304)
Q Consensus 83 ~I~LedLt~gf~~PcVlDiKmG~rt~~~~as---------------------------~eK~~r~~~k-------~~~tT 128 (304)
||+|||||+||++|||||||||+|||+++++ +||++++..| +..||
T Consensus 60 ~i~LEdLt~gf~~PcVmDiKmG~rt~~~~~~~ka~~~p~~R~~ly~km~~~dp~apt~ee~~~~~~~K~rym~~r~~~tt 139 (276)
T 1w2f_A 60 YLQLQDLLDGFDGPCVLDCKMGVRTYLEEELTKARERPKLRKDMYKKMLAVDPEAPTEEEHAQRAVTKPRYMQWREGISS 139 (276)
T ss_dssp EEEEECTTTTCSSCEEEEEEESSCCSCHHHHHHHHHSCCEEHHHHHHHHHHCTTSSCHHHHHHTCEEHHHHHHHHHHHSS
T ss_pred EEEechHhcCCCCceEEEEEEeeeecCchhhhhhccchhhhhhhhhhhhccCcCCCcHHHHHHHHHhhhhhhhhhhcccc
Confidence 9999999999999999999999999998731 3444544444 45899
Q ss_pred cceecEEEeeeeeeecCCCcccccchhhhcccChHHHHHHHHHhccCCCCCCCCCCCCCCCCccccCChhHHHHHHHHHH
Q 021985 129 TSLLGFRISGLQIYENKESGFWKPVKKLVQAFNVEDVQLVLRKFVSSNSPTDSNSVPDCSFAPSVYGGSSGILAQLLELK 208 (304)
Q Consensus 129 s~~lGfRi~Gm~v~~~~~~~~~~~~K~~Gr~lt~e~~~~~l~~Ff~~~~~~~~~~~~~~~~~~~v~~~i~~~l~~L~~l~ 208 (304)
|+++|||||||++|+.. .+|+|||+++.+++.++|..||+.+. .+ ++.+|+||++|+
T Consensus 140 s~~lGfRi~G~k~~~~~------~~K~~gr~~s~~~~~~~l~~F~~~~~--------------~i---~~~~l~~L~~l~ 196 (276)
T 1w2f_A 140 STTLGFRIEGIKKADGS------CSTDFKTTRSREQVLRVFEEFVQGDE--------------EV---LRRYLNRLQQIR 196 (276)
T ss_dssp HHHHSEEEEEEECTTSC------EECCCTTCCSHHHHHHHHHHHHTTCH--------------HH---HHHHHHHHHHHH
T ss_pred cccCCEEEEEEEccCCc------ccchhcccCCHHHHHHHHHHHhcCCH--------------HH---HHHHHHHHHHHH
Confidence 99999999999999864 58999999999999999999998642 12 467999999999
Q ss_pred HHHHhCCee---EEeeeeeEEEEecCcccCCCCCCCceEEEecCCCcCCC-------------CCCCchHHHHHHHHHHH
Q 021985 209 EWFEDQTIY---NLNSCSVLMVYEKESLLKGTSPGAEIKLVDFAHVIEGT-------------GIIDHNFLGGLCSLIKI 272 (304)
Q Consensus 209 ~~~~~q~~~---rf~sSSLLivYD~~~~~~~~~~~v~VrlIDFAh~~~~~-------------~~~D~g~l~GL~nLi~i 272 (304)
+||+++..| +|||||||||||++. .++||||||||+++.. +.+|+|||+||+|||++
T Consensus 197 ~~~e~~~~~~~~~f~sSSLL~vYD~~~-------~~~v~mIDFAh~~~~~~~~~~~h~~~~~~~~~D~gyL~GL~nLi~i 269 (276)
T 1w2f_A 197 DTLEVSEFFRRHEVIGSSLLFVHDHCH-------RAGVWLIDFGKTTPLPDGQILDHRRPWEEGNREDGYLLGLDNLIGI 269 (276)
T ss_dssp HHHTTCHHHHTEEEESCEEEEEECTTC-------CEEEEEECCTEEEECSTTCCCCSCSCCCTTSCCCCHHHHHHHHHHH
T ss_pred HHHHhCccccccccccceEEEEEeCCC-------cCcEEEEECCceEEcCCCccccCCCCccCCCCCccHHHHHHHHHHH
Confidence 999999876 599999999999975 5899999999997421 35799999999999999
Q ss_pred HHHHHcC
Q 021985 273 ISEILTG 279 (304)
Q Consensus 273 l~~i~~~ 279 (304)
|++|+++
T Consensus 270 l~~i~~~ 276 (276)
T 1w2f_A 270 LASLAER 276 (276)
T ss_dssp HHHHHTC
T ss_pred HHHHhhC
Confidence 9999863
No 5
>2a98_A Inositol 1,4,5-trisphosphate 3-kinase C; structural genomics, structural genomics consortium, SGC, transferase; HET: I3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-62 Score=450.16 Aligned_cols=209 Identities=25% Similarity=0.427 Sum_probs=185.1
Q ss_pred CCceeEeeccCCCCCcHHHHHHHHHhcCCCCccccccccccceEEEEeecCCCCCCcCeEEecccccCCCCCcEEEeeec
Q 021985 25 DSGCFYKPYQCDDRGSKEVAFYTSFSSNTKIPAHIRRFFPVFYGTKLVEASDGSGLSPHIVLQDLVSNRNNPSIMDIKIG 104 (304)
Q Consensus 25 ~~g~i~Kp~~~~~r~~~E~~FY~~l~~~~~~~~~L~~f~P~y~G~~~~~~~~~~~~~~~I~LedLt~gf~~PcVlDiKmG 104 (304)
++|+|+||++ .+|++||+.++.+ .|++|+|+|+|+++.++ ..||+|||||+||++|||||||||
T Consensus 1 ~~g~i~K~~~-----~~E~~fY~~l~~~-----~L~~fvP~y~G~~~~~~------~~~i~LEdLt~g~~~PcVmDiKmG 64 (259)
T 2a98_A 1 EDGRILKRFC-----QCEQRSLEQLMKD-----PLRPFVPAYYGMVLQDG------QTFNQMEDLLADFEGPSIMDCKMG 64 (259)
T ss_dssp CCSEEEEECC-----HHHHHHHHHHTTS-----TTGGGSCCEEEEEEETT------EEEEEEECTTTTCSSCEEEEEEES
T ss_pred CCCEEeccCC-----HHHHHHHHHhhhh-----hHHHhCcCceEEEEECC------ceEEEeehHhcCCCCceEEEEEEe
Confidence 4799999998 8999999999753 69999999999998653 369999999999999999999999
Q ss_pred ceecCCCC---------------------------CHHHHHHHhhhc-------ccCCcceecEEEeeeeeeecCCCccc
Q 021985 105 ARTWYPQA---------------------------SDDYIERCFQKD-------RETTTSLLGFRISGLQIYENKESGFW 150 (304)
Q Consensus 105 ~rt~~~~a---------------------------s~eK~~r~~~k~-------~~tTs~~lGfRi~Gm~v~~~~~~~~~ 150 (304)
+|||++++ ++||++++..|+ ..|||+++|||||||++|+..
T Consensus 65 ~Rt~~~~~~~~~~~~~~~r~d~y~Kmv~~dp~apt~eek~~~~~~K~rym~~re~~tTs~~lGfRI~G~k~~~~~----- 139 (259)
T 2a98_A 65 SRTYLEEELVKARERPRPRKDMYEKMVAVDPGAPTPEEHAQGAVTKPRYMQWRETMSSTSTLGFRIEGIKKADGT----- 139 (259)
T ss_dssp SCCSCGGGTSSTTTSCCCBHHHHHHHHTTCTTCSCHHHHHHTCBCHHHHHHHHHHHSTHHHHSEEEEEEECTTSC-----
T ss_pred eeecCchhhhhhcccchhhhhhhhhhhccCCCCCchHHHHHHHHHHhhhhhhhcccCccccCCEEEEeEEccCCC-----
Confidence 99998763 377888888888 589999999999999999864
Q ss_pred ccchhhhcccChHHHHHHHHHhccCCCCCCCCCCCCCCCCccccCChhHHHHHHHHHHHHHHhCCee---EEeeeeeEEE
Q 021985 151 KPVKKLVQAFNVEDVQLVLRKFVSSNSPTDSNSVPDCSFAPSVYGGSSGILAQLLELKEWFEDQTIY---NLNSCSVLMV 227 (304)
Q Consensus 151 ~~~K~~Gr~lt~e~~~~~l~~Ff~~~~~~~~~~~~~~~~~~~v~~~i~~~l~~L~~l~~~~~~q~~~---rf~sSSLLiv 227 (304)
.+|+|||+++.+++.++|..||+.+.. + ++.+|+||++|++||+.+..| ||||||||||
T Consensus 140 -~~K~~gr~~~~~~~~~~l~~F~~~~~~--------------~---~~~~l~~L~~l~~~~e~~~~f~~~rf~sSSLL~v 201 (259)
T 2a98_A 140 -CNTNFKKTQALEQVTKVLEDFVDGDHV--------------I---LQKYVACLEELREALEISPFFKTHEVVGSSLLFV 201 (259)
T ss_dssp -EECCCTTCCSHHHHHHHHHHHHTTCHH--------------H---HHHHHHHHHHHHHHHHHCHHHHTEEECSCEEEEE
T ss_pred -CCchhhhcCCHHHHHHHHHHHhcCCHH--------------H---HHHHHHHHHHHHHHHHhCcCccceEEEeeeEEEE
Confidence 689999999999999999999986522 2 367999999999999999987 9999999999
Q ss_pred EecCcccCCCCCCCceEEEecCCCcCC-------------CCCCCchHHHHHHHHHHHHHHHHcC
Q 021985 228 YEKESLLKGTSPGAEIKLVDFAHVIEG-------------TGIIDHNFLGGLCSLIKIISEILTG 279 (304)
Q Consensus 228 YD~~~~~~~~~~~v~VrlIDFAh~~~~-------------~~~~D~g~l~GL~nLi~il~~i~~~ 279 (304)
||++. .++||||||||+++. ++.+|+|||+||+|||++|++|+++
T Consensus 202 YD~~~-------~~~v~lIDFAh~~~~~~~~~~dh~~p~~~~~~D~gyL~GL~nLi~il~~i~~~ 259 (259)
T 2a98_A 202 HDHTG-------LAKVWMIDFGKTVALPDHQTLSHRLPWAEGNREDGYLWGLDNMICLLQGLAQS 259 (259)
T ss_dssp ECTTS-------CEEEEEECCTTEEECSTTCCCCSSSCCCTTTCCCCHHHHHHHHHHHHHHHHTC
T ss_pred EeCCC-------cCcEEEEECCceeecCCCccccCCCCcccCCCCccHHHHHHHHHHHHHHHhhC
Confidence 99974 699999999999742 2468999999999999999999864
No 6
>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A
Probab=87.59 E-value=0.44 Score=45.65 Aligned_cols=75 Identities=21% Similarity=0.196 Sum_probs=52.1
Q ss_pred CCCceeEeeccCCCCCcHHHHHHHHHhcCC-C-C-ccccccccccceEEEEeecCCCCCCcCeEEecccccCC-CCCcEE
Q 021985 24 DDSGCFYKPYQCDDRGSKEVAFYTSFSSNT-K-I-PAHIRRFFPVFYGTKLVEASDGSGLSPHIVLQDLVSNR-NNPSIM 99 (304)
Q Consensus 24 ~~~g~i~Kp~~~~~r~~~E~~FY~~l~~~~-~-~-~~~L~~f~P~y~G~~~~~~~~~~~~~~~I~LedLt~gf-~~PcVl 99 (304)
.++.+|+|-++ ..|..|...+.... . + ...-.-++|+|+|...+... .....||+||||.++- .-..+-
T Consensus 127 ~D~rfiIKti~-----~~E~~~l~~~lp~Y~~~~~~~~~~TLL~k~~Gly~v~~~--~~~~~fvVM~Nlf~~~~~i~~~y 199 (394)
T 2ybx_A 127 YDKRYIIKTIT-----SEDVAEMHNILKKYHQYIVECHGITLLPQFLGMYRLNVD--GVEIYVIVTRNVFSHRLSVYRKY 199 (394)
T ss_dssp TTSSEEEEEEC-----HHHHHHHHHHHHHHHHHHHHTTTCCSSCCEEEEEEEEET--TEEEEEEEEECSSCSSSCCSEEE
T ss_pred CCCcEEEEeeC-----HHHHHHHHHHHHHHHHHHHhcCCCcChhhhcEEEEEEEC--CeEEEEEEEecCCCCCcceeeee
Confidence 35669999998 89999988865421 0 0 00124679999999887542 1235689999999874 445789
Q ss_pred Eeeecc
Q 021985 100 DIKIGA 105 (304)
Q Consensus 100 DiKmG~ 105 (304)
|||=-+
T Consensus 200 DLKGS~ 205 (394)
T 2ybx_A 200 DLKGST 205 (394)
T ss_dssp EECCSS
T ss_pred eecccc
Confidence 998444
No 7
>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens}
Probab=87.54 E-value=0.47 Score=45.36 Aligned_cols=73 Identities=26% Similarity=0.253 Sum_probs=50.2
Q ss_pred CCCceeEeeccCCCCCcHHHHHHHHHhcCC-C-C-ccccccccccceEEEEeecCCCCCCcCeEEecccccCC-CCCcEE
Q 021985 24 DDSGCFYKPYQCDDRGSKEVAFYTSFSSNT-K-I-PAHIRRFFPVFYGTKLVEASDGSGLSPHIVLQDLVSNR-NNPSIM 99 (304)
Q Consensus 24 ~~~g~i~Kp~~~~~r~~~E~~FY~~l~~~~-~-~-~~~L~~f~P~y~G~~~~~~~~~~~~~~~I~LedLt~gf-~~PcVl 99 (304)
.++.+|+|-++ ..|..|...+.... . + ...-..++|+|+|...+... .....||+||||.++- .-.-+-
T Consensus 116 ~D~rfiIKti~-----~~E~~~l~~~lp~Y~~~~~~~~~~TLL~k~~Gly~v~~~--~~~~~~vVM~Nlf~~~~~i~~~y 188 (392)
T 2gk9_A 116 YDRTLVIKEVS-----SEDIADMHSNLSNYHQYIVKCHGNTLLPQFLGMYRVSVD--NEDSYMLVMRNMFSHRLPVHRKY 188 (392)
T ss_dssp TTSSEEEEECC-----HHHHHHHHHHHHHHHHHHHHTTSCSSSCCEEEEEECCBS--SCCCEEEEEECSSCSSSCCSCCC
T ss_pred CCCcEEEEeeC-----HHHHHHHHHHHHHHHHHHHhhCCCcchhhhceEEEEEEC--CeEEEEEEEecCCCCCcceeeee
Confidence 35669999998 89999988865421 0 0 00124679999999987542 2235689999998874 334577
Q ss_pred Eeee
Q 021985 100 DIKI 103 (304)
Q Consensus 100 DiKm 103 (304)
|||=
T Consensus 189 DLKG 192 (392)
T 2gk9_A 189 DLKG 192 (392)
T ss_dssp EECC
T ss_pred eecc
Confidence 8873
No 8
>3owt_C Regulatory protein SIR3; RCT domain, protein binding; 2.00A {Saccharomyces cerevisiae}
Probab=63.58 E-value=2.3 Score=24.16 Aligned_cols=12 Identities=33% Similarity=0.672 Sum_probs=9.2
Q ss_pred CCceEEEecCCC
Q 021985 240 GAEIKLVDFAHV 251 (304)
Q Consensus 240 ~v~VrlIDFAh~ 251 (304)
+-..+|||||..
T Consensus 3 kgnakmidfatl 14 (27)
T 3owt_C 3 KGNAKMIDFATL 14 (27)
T ss_pred CCcceeeehHHH
Confidence 346899999964
No 9
>3aon_B V-type sodium ATPase subunit G; V-ATPase, coiled-coil, alpha/beta fold, hydrol Na(+)-ATPase, NTPA3-NTPB3, NTPC, central AXIS; HET: MSE; 2.00A {Enterococcus hirae}
Probab=17.90 E-value=28 Score=27.14 Aligned_cols=31 Identities=13% Similarity=0.368 Sum_probs=23.3
Q ss_pred ceecEEEeeeeeeecCCCcccccchhhhcccChHHHHHHHHHhccC
Q 021985 130 SLLGFRISGLQIYENKESGFWKPVKKLVQAFNVEDVQLVLRKFVSS 175 (304)
Q Consensus 130 ~~lGfRi~Gm~v~~~~~~~~~~~~K~~Gr~lt~e~~~~~l~~Ff~~ 175 (304)
..+|||+.|+.+|-.. +.+++.++|+++...
T Consensus 13 tv~GFrLaGie~~~v~---------------~~ee~~~~~~~l~~~ 43 (115)
T 3aon_B 13 SVSPFRLFGFDVQHGT---------------TKTEIRKTIDEMAKN 43 (115)
T ss_dssp HHGGGGGGTCEEECCC---------------SHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCeEEEeC---------------CHHHHHHHHHHHHhc
Confidence 3689999999876432 457888888888764
No 10
>2d00_A V-type ATP synthase subunit F; V-ATPase, CHEY, FRET, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.149.1.1 PDB: 3a5c_H* 3a5d_H 3j0j_H*
Probab=15.36 E-value=29 Score=26.68 Aligned_cols=30 Identities=33% Similarity=0.597 Sum_probs=23.3
Q ss_pred eecEEEeeeeeeecCCCcccccchhhhcccChHHHHHHHHHhccC
Q 021985 131 LLGFRISGLQIYENKESGFWKPVKKLVQAFNVEDVQLVLRKFVSS 175 (304)
Q Consensus 131 ~lGfRi~Gm~v~~~~~~~~~~~~K~~Gr~lt~e~~~~~l~~Ff~~ 175 (304)
-+|||+.|+.+|-.. +.+++.++|+++...
T Consensus 15 v~GFrLaGi~~~~v~---------------~~ee~~~~~~~l~~~ 44 (109)
T 2d00_A 15 AQGFRLAGLEGYGAS---------------SAEEAQSLLETLVER 44 (109)
T ss_dssp HHHHHHTTSEEEECS---------------SHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEeC---------------CHHHHHHHHHHHhhC
Confidence 589999999876432 557888999998864
Done!