Query 021989
Match_columns 304
No_of_seqs 208 out of 1680
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 07:10:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021989.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021989hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2738 Putative methionine am 100.0 2E-67 4.4E-72 472.7 20.9 237 68-304 56-297 (369)
2 PLN03158 methionine aminopepti 100.0 1.6E-55 3.5E-60 423.2 27.4 228 76-303 85-317 (396)
3 COG0024 Map Methionine aminope 100.0 7.8E-45 1.7E-49 328.2 20.4 183 122-304 4-188 (255)
4 PRK12318 methionine aminopepti 100.0 8.9E-42 1.9E-46 317.4 24.0 182 122-303 42-225 (291)
5 PRK12897 methionine aminopepti 100.0 8.3E-42 1.8E-46 310.8 22.1 182 121-302 2-183 (248)
6 PRK07281 methionine aminopepti 100.0 1.2E-41 2.6E-46 315.4 23.2 182 121-302 2-214 (286)
7 TIGR00500 met_pdase_I methioni 100.0 2.2E-40 4.8E-45 300.7 22.2 181 122-302 2-182 (247)
8 PRK12896 methionine aminopepti 100.0 2.5E-39 5.3E-44 294.9 21.8 182 119-300 6-187 (255)
9 PRK05716 methionine aminopepti 100.0 5.5E-39 1.2E-43 292.1 21.8 182 121-302 3-184 (252)
10 PRK09795 aminopeptidase; Provi 100.0 5.1E-38 1.1E-42 300.4 21.4 180 117-301 121-306 (361)
11 COG0006 PepP Xaa-Pro aminopept 100.0 6.2E-38 1.3E-42 302.1 19.5 185 111-300 142-330 (384)
12 cd01086 MetAP1 Methionine Amin 100.0 5.2E-36 1.1E-40 270.4 20.9 172 129-300 1-172 (238)
13 PRK10879 proline aminopeptidas 100.0 3.7E-36 8.1E-41 294.2 19.4 184 112-300 162-365 (438)
14 PRK15173 peptidase; Provisiona 100.0 9.5E-36 2E-40 280.9 20.7 185 111-301 83-270 (323)
15 PRK14575 putative peptidase; P 100.0 1.6E-35 3.4E-40 287.4 20.5 186 110-301 165-353 (406)
16 TIGR02993 ectoine_eutD ectoine 100.0 9.6E-36 2.1E-40 287.6 18.5 183 111-295 146-328 (391)
17 cd01090 Creatinase Creatine am 100.0 3.8E-35 8.1E-40 264.1 20.3 169 129-297 1-171 (228)
18 cd01087 Prolidase Prolidase. E 100.0 6.3E-35 1.4E-39 264.4 19.3 165 129-299 1-185 (243)
19 PRK14576 putative endopeptidas 100.0 8.2E-35 1.8E-39 282.3 20.8 185 111-301 165-352 (405)
20 cd01092 APP-like Similar to Pr 100.0 3.5E-34 7.6E-39 252.3 20.9 168 129-301 1-169 (208)
21 TIGR00495 crvDNA_42K 42K curve 100.0 5.6E-34 1.2E-38 274.3 21.1 181 121-302 11-206 (389)
22 PF00557 Peptidase_M24: Metall 100.0 1.6E-33 3.5E-38 248.5 17.4 165 130-300 1-168 (207)
23 PRK13607 proline dipeptidase; 100.0 1.1E-33 2.4E-38 276.7 17.3 179 113-298 151-350 (443)
24 PTZ00053 methionine aminopepti 100.0 2E-32 4.3E-37 266.3 22.3 174 120-302 149-339 (470)
25 cd01066 APP_MetAP A family inc 100.0 7.5E-32 1.6E-36 235.0 19.7 165 129-299 1-166 (207)
26 cd01085 APP X-Prolyl Aminopept 100.0 1.2E-31 2.6E-36 240.8 19.9 165 130-300 5-177 (224)
27 PRK08671 methionine aminopepti 100.0 1.2E-31 2.5E-36 249.7 20.5 164 128-302 1-168 (291)
28 TIGR00501 met_pdase_II methion 100.0 2.4E-31 5.2E-36 247.9 19.6 165 126-301 2-170 (295)
29 cd01088 MetAP2 Methionine Amin 100.0 1.2E-30 2.6E-35 242.9 18.9 163 129-302 1-167 (291)
30 cd01091 CDC68-like Related to 100.0 2.5E-30 5.5E-35 234.8 18.1 173 129-303 1-189 (243)
31 cd01089 PA2G4-like Related to 100.0 6.9E-30 1.5E-34 229.7 19.1 163 129-291 1-175 (228)
32 KOG2414 Putative Xaa-Pro amino 100.0 2.6E-28 5.6E-33 228.3 13.9 182 116-302 221-421 (488)
33 KOG2737 Putative metallopeptid 99.9 3.4E-27 7.4E-32 218.9 13.9 178 115-296 177-378 (492)
34 KOG1189 Global transcriptional 99.8 7.1E-19 1.5E-23 174.7 14.8 199 101-304 115-328 (960)
35 KOG2413 Xaa-Pro aminopeptidase 99.7 1.7E-16 3.6E-21 155.7 13.5 185 114-303 298-495 (606)
36 KOG2776 Metallopeptidase [Gene 99.6 5.1E-15 1.1E-19 137.4 14.2 165 121-287 13-191 (398)
37 KOG2775 Metallopeptidase [Gene 99.5 1.6E-13 3.5E-18 124.8 13.1 168 124-300 80-264 (397)
38 COG5406 Nucleosome binding fac 99.5 1.4E-13 3E-18 135.2 11.0 192 110-304 157-369 (1001)
39 cd01066 APP_MetAP A family inc 97.4 0.0029 6.4E-08 54.5 11.8 102 130-233 102-204 (207)
40 PRK05716 methionine aminopepti 97.2 0.0046 1E-07 56.0 11.2 102 131-233 119-240 (252)
41 cd01092 APP-like Similar to Pr 97.1 0.0065 1.4E-07 53.0 11.5 99 130-232 103-204 (208)
42 TIGR00500 met_pdase_I methioni 97.0 0.0092 2E-07 54.0 11.7 100 131-233 117-238 (247)
43 cd01086 MetAP1 Methionine Amin 96.9 0.013 2.9E-07 52.5 11.9 102 131-233 109-230 (238)
44 PRK15173 peptidase; Provisiona 96.9 0.012 2.5E-07 55.9 11.6 102 130-232 202-305 (323)
45 PRK12897 methionine aminopepti 96.8 0.012 2.5E-07 53.5 10.5 100 131-233 118-239 (248)
46 PRK14575 putative peptidase; P 96.7 0.016 3.6E-07 56.6 11.6 101 131-233 286-389 (406)
47 PRK14576 putative endopeptidas 96.7 0.02 4.4E-07 55.9 11.8 103 130-233 284-388 (405)
48 PRK08671 methionine aminopepti 96.6 0.037 7.9E-07 51.7 12.7 101 131-232 102-205 (291)
49 PRK12896 methionine aminopepti 96.6 0.029 6.2E-07 50.9 11.6 101 132-233 125-246 (255)
50 cd01088 MetAP2 Methionine Amin 96.6 0.038 8.3E-07 51.6 12.3 97 131-232 101-204 (291)
51 cd01091 CDC68-like Related to 96.6 0.027 5.8E-07 51.3 10.9 100 130-233 119-234 (243)
52 PRK12318 methionine aminopepti 96.5 0.026 5.7E-07 52.7 11.1 86 131-219 159-247 (291)
53 cd01090 Creatinase Creatine am 96.5 0.039 8.5E-07 49.6 11.5 100 131-233 110-220 (228)
54 PRK07281 methionine aminopepti 96.5 0.027 5.8E-07 52.6 10.5 85 131-218 149-237 (286)
55 TIGR02993 ectoine_eutD ectoine 96.4 0.028 6E-07 54.7 10.8 99 131-233 271-374 (391)
56 PRK09795 aminopeptidase; Provi 96.3 0.063 1.4E-06 51.5 12.3 104 126-232 236-341 (361)
57 cd01089 PA2G4-like Related to 96.2 0.053 1.2E-06 48.6 10.5 98 130-233 120-220 (228)
58 PLN03158 methionine aminopepti 96.2 0.058 1.3E-06 52.6 11.4 85 132-217 252-338 (396)
59 cd01087 Prolidase Prolidase. E 95.9 0.091 2E-06 47.3 10.8 102 131-233 104-235 (243)
60 PF00557 Peptidase_M24: Metall 95.9 0.038 8.2E-07 48.3 8.1 95 132-231 104-205 (207)
61 TIGR00501 met_pdase_II methion 95.8 0.076 1.6E-06 49.7 10.2 98 132-231 106-207 (295)
62 TIGR00495 crvDNA_42K 42K curve 95.4 0.14 3E-06 50.0 10.6 100 131-231 139-248 (389)
63 COG0024 Map Methionine aminope 95.2 0.14 3.1E-06 47.0 9.3 88 130-218 120-209 (255)
64 COG0006 PepP Xaa-Pro aminopept 95.1 0.28 6.1E-06 47.4 11.6 97 132-233 264-367 (384)
65 PTZ00053 methionine aminopepti 94.3 0.4 8.8E-06 47.8 10.7 95 131-231 264-375 (470)
66 KOG2738 Putative methionine am 93.6 0.2 4.2E-06 46.8 6.5 43 237-279 124-166 (369)
67 PRK10879 proline aminopeptidas 93.0 1.1 2.5E-05 44.2 11.4 101 132-232 284-410 (438)
68 cd01085 APP X-Prolyl Aminopept 91.1 4.4 9.6E-05 36.2 12.0 98 133-232 114-215 (224)
69 PRK13607 proline dipeptidase; 86.0 7.9 0.00017 38.4 10.8 35 133-167 271-305 (443)
70 KOG1189 Global transcriptional 72.0 16 0.00035 38.5 7.9 100 132-235 259-370 (960)
71 cd01666 TGS_DRG_C TGS_DRG_C: 59.9 33 0.00072 25.3 5.7 52 150-212 21-73 (75)
72 PF05184 SapB_1: Saposin-like 52.6 29 0.00062 21.6 3.8 34 135-168 3-36 (39)
73 PF00254 FKBP_C: FKBP-type pep 50.9 22 0.00047 26.6 3.5 51 201-260 2-59 (94)
74 TIGR00115 tig trigger factor. 47.3 53 0.0012 31.9 6.5 58 153-233 119-180 (408)
75 PRK01490 tig trigger factor; P 47.3 60 0.0013 31.9 6.9 56 153-232 131-190 (435)
76 COG5406 Nucleosome binding fac 44.1 81 0.0018 32.9 7.2 71 141-215 309-384 (1001)
77 cd04938 TGS_Obg-like TGS_Obg-l 39.7 49 0.0011 24.4 3.8 47 150-212 28-74 (76)
78 PF03477 ATP-cone: ATP cone do 36.3 25 0.00054 26.2 1.8 36 137-172 39-74 (90)
79 PF02829 3H: 3H domain; Inter 32.3 86 0.0019 24.5 4.3 69 209-279 22-97 (98)
80 COG4001 Predicted metal-bindin 31.7 1.2E+02 0.0026 23.3 4.8 39 132-172 54-92 (102)
81 PF04363 DUF496: Protein of un 31.7 1.4E+02 0.0031 22.9 5.2 39 130-169 26-64 (95)
82 PF13798 PCYCGC: Protein of un 31.7 1E+02 0.0022 26.3 4.9 43 134-176 112-154 (158)
83 KOG2776 Metallopeptidase [Gene 31.6 2.3E+02 0.0049 27.6 7.7 83 134-218 144-235 (398)
84 PF12631 GTPase_Cys_C: Catalyt 31.3 1.2E+02 0.0026 21.9 4.8 42 234-275 10-51 (73)
85 PF10415 FumaraseC_C: Fumarase 27.7 61 0.0013 22.4 2.4 35 131-165 10-49 (55)
86 KOG2775 Metallopeptidase [Gene 27.5 1.7E+02 0.0036 27.9 5.9 44 236-279 86-133 (397)
87 KOG2737 Putative metallopeptid 27.1 1.6E+02 0.0035 28.9 5.9 30 140-169 309-338 (492)
88 PF06135 DUF965: Bacterial pro 26.5 74 0.0016 23.9 2.8 41 261-304 16-56 (79)
89 COG0544 Tig FKBP-type peptidyl 25.0 1.3E+02 0.0028 30.0 5.1 45 153-221 131-175 (441)
90 PRK05423 hypothetical protein; 24.4 1.1E+02 0.0023 23.9 3.4 28 142-169 44-71 (104)
91 PRK05473 hypothetical protein; 23.1 93 0.002 23.7 2.8 40 262-304 20-59 (86)
92 PRK00464 nrdR transcriptional 21.9 2.4E+02 0.0051 23.9 5.4 40 135-174 84-123 (154)
93 PF09506 Salt_tol_Pase: Glucos 21.3 3.4E+02 0.0073 26.3 6.8 126 125-251 98-279 (381)
94 TIGR02399 salt_tol_Pase glucos 21.1 3.3E+02 0.0072 26.4 6.7 127 125-252 104-285 (389)
95 TIGR03516 ppisom_GldI peptidyl 20.3 2.1E+02 0.0045 24.7 4.9 54 200-262 82-141 (177)
96 cd01669 TGS_Ygr210_C TGS_Ygr21 20.1 2.6E+02 0.0056 20.6 4.7 48 150-212 27-74 (76)
No 1
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2e-67 Score=472.65 Aligned_cols=237 Identities=62% Similarity=1.031 Sum_probs=224.3
Q ss_pred HHHHHhhhhccCCCCCCCCCCccccCCCCccCCCCCCCCCcccCCCC----CCCCc-ccccCCHHHHHHHHHHHHHHHHH
Q 021989 68 MRIRRERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSL----PDLSP-EYQIHDSESIAKMRAACELAARV 142 (304)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~l~~g~~s~~~~vp~~i~~p~y~~~~~~----~~l~~-~R~vKs~~EIe~mR~A~~ia~~~ 142 (304)
+.+...+++++++.|.|+++||||++||+++||++|++|+|++.+.+ +.... ...+++++||+.||+||++++++
T Consensus 56 ~~~~~~g~~~p~p~~~~~g~Lr~~pvsprr~VP~hI~rPdya~~g~s~se~~~~~s~~i~i~~~e~ie~mR~ac~Larev 135 (369)
T KOG2738|consen 56 LRIRKEGQYNPWPKFRFTGPLRPGPVSPRRPVPDHIPRPDYADSGVSLSEQPEISSNEIKILDPEGIEGMRKACRLAREV 135 (369)
T ss_pred hhhhhhccCCCCccccccCCccccCCCCCCcCCccCCCCchhhcCCcccccccccccceeccCHHHHHHHHHHHHHHHHH
Confidence 34455667888999999999999999999999999999999987443 22222 35689999999999999999999
Q ss_pred HHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCEEEEEeecccCcEE
Q 021989 143 LDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYH 222 (304)
Q Consensus 143 l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~~r~l~~GDiv~iD~~~~~~GY~ 222 (304)
++++..+++||||++|||+++|++++++|+|||+|||++||+++|+|+|+++|||+||.|+|++||||+||++++++|||
T Consensus 136 Ld~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvNiDVtvY~~GyH 215 (369)
T KOG2738|consen 136 LDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYH 215 (369)
T ss_pred HHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCCcCcCCCCCEEeEEEEEEecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCccCcceeeecCCCCccCCCcCCC
Q 021989 223 GDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHN 302 (304)
Q Consensus 223 ~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~ 302 (304)
+|+++||+||+++++.++|+++++||++.||++||||++|++|++.|++++.++||++++.|+|||||..||..|+|+||
T Consensus 216 GDlneTffvG~Vde~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sVVr~ycGHGig~~FH~~PnipHy 295 (369)
T KOG2738|consen 216 GDLNETFFVGNVDEKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSVVRSYCGHGIGRVFHCAPNIPHY 295 (369)
T ss_pred CccccceEeeccCHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCceeehhhhccccccccccCCCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC
Q 021989 303 RK 304 (304)
Q Consensus 303 ~n 304 (304)
.|
T Consensus 296 a~ 297 (369)
T KOG2738|consen 296 AK 297 (369)
T ss_pred cc
Confidence 86
No 2
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.6e-55 Score=423.17 Aligned_cols=228 Identities=50% Similarity=0.880 Sum_probs=218.1
Q ss_pred hccCCCCCCCCCCccccCCCCccCCCCCCCCCcccCCCC-----CCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhc
Q 021989 76 LQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSL-----PDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLV 150 (304)
Q Consensus 76 ~~~~~~~~~~~~l~~g~~s~~~~vp~~i~~p~y~~~~~~-----~~l~~~R~vKs~~EIe~mR~A~~ia~~~l~~~~~~i 150 (304)
+..++.|+|+++||||++||.+.||++|++|+|+..+.+ ..+.+.|.|||++||+.||+|+++++++++++.+.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~p~y~~~~~~~~~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~i 164 (396)
T PLN03158 85 TSKLPDFDWTGPLRPYPISPRRVVPDHIPKPDWALDGTPKIEPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAI 164 (396)
T ss_pred cCCCCCCCCCcccccCCCCCCCCCCccCCCCccccCCCCccccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 456777999999999999999999999999999986433 235567999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCEEEEEeecccCcEEeceeeeEE
Q 021989 151 RPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFL 230 (304)
Q Consensus 151 ~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~ 230 (304)
+||+||.||++++++.++++|++|++++|.+||+++|+|.|+.+||++|++++|++||+|+||++++++||++|++|||+
T Consensus 165 rpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~~i~Hgip~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~ 244 (396)
T PLN03158 165 KPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFF 244 (396)
T ss_pred cCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeecccccccCCCCCCccCCCCCEEEEEEeEEECCEEEeEEeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCccCcceeeecCCCCccCCCcCCCC
Q 021989 231 CGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNR 303 (304)
Q Consensus 231 vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~~ 303 (304)
+|++++++++++++++++++++|+++|||++++||+++++++++++||+++++++|||||+.+||.|.|+||.
T Consensus 245 VG~~~~e~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~~~~~~~G~~~v~~~~GHGIG~~~He~P~i~~~~ 317 (396)
T PLN03158 245 VGNVDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGLSVVKSYCGHGIGELFHCAPNIPHYA 317 (396)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCCCccCCccCCccccccCCCCCCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999874
No 3
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=7.8e-45 Score=328.16 Aligned_cols=183 Identities=47% Similarity=0.784 Sum_probs=176.9
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCC-
Q 021989 122 QIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPD- 200 (304)
Q Consensus 122 ~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~- 200 (304)
.+|+++||+.||+||+|++++++++.+.++||+|+.||+..++++++++|++|++++|.+||..+|+|.|+++|||+|+
T Consensus 4 ~ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~v~HgiP~d 83 (255)
T COG0024 4 SIKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEVVAHGIPGD 83 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhheeeecCCCC
Confidence 3899999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCCCCCCEEEEEeecccCcEEeceeeeEEccCCC-HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCC
Q 021989 201 SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVS-DGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFG 279 (304)
Q Consensus 201 ~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~-~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~ 279 (304)
+++|++||+|+||+|+.++||++|.++||.+|+.+ +..++|.+++++|++++|+.+|||+++.||+++|+++++++||.
T Consensus 84 ~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~~~G~~ 163 (255)
T COG0024 84 KKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAESRGFS 163 (255)
T ss_pred CcccCCCCEEEEEEEEEECCeeeeEEEEEECCCCChHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCE
Confidence 68899999999999999999999999999999766 47777999999999999999999999999999999999999999
Q ss_pred ccCcceeeecCCCCccCCCcCCCCC
Q 021989 280 VVERFVGHGVGKVFHSEPIIYHNRK 304 (304)
Q Consensus 280 ~~~~~~GHgIG~~~he~P~i~~~~n 304 (304)
+++.|+|||||..+||.|+|+||.+
T Consensus 164 vVr~~~GHgig~~~He~p~ip~y~~ 188 (255)
T COG0024 164 VVRNLTGHGIGRELHEEPSIPNYGK 188 (255)
T ss_pred EeecccCCccCcccCCCCeeccccC
Confidence 9999999999999999999999864
No 4
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=8.9e-42 Score=317.41 Aligned_cols=182 Identities=46% Similarity=0.842 Sum_probs=174.7
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCC--CCCCeeeecCCCCcccCCC
Q 021989 122 QIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYG--GFPKSVCTSVNECMCHGIP 199 (304)
Q Consensus 122 ~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~--gfp~~v~sg~n~~~~H~~p 199 (304)
+|||++||+.||+|+++++++++++.+.++||+||.||++.+++.+.+.|+.|+.++|. +||.++|+|.|+.++|+.|
T Consensus 42 ~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~~g~n~~~~H~~p 121 (291)
T PRK12318 42 IIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTICTSLNEVICHGIP 121 (291)
T ss_pred EECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceEeeccceeecCCC
Confidence 59999999999999999999999999999999999999999999999999988877775 5999999999999999999
Q ss_pred CCCCCCCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCC
Q 021989 200 DSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFG 279 (304)
Q Consensus 200 ~~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~ 279 (304)
++++|++||+|++|+++.++||++|++|||++|+++++++++|+.+.++++++++.+|||++++||++++++++++.||.
T Consensus 122 ~~~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~ 201 (291)
T PRK12318 122 NDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFS 201 (291)
T ss_pred CCCccCCCCEEEEEEeEEECcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcceeeecCCCCccCCCcCCCC
Q 021989 280 VVERFVGHGVGKVFHSEPIIYHNR 303 (304)
Q Consensus 280 ~~~~~~GHgIG~~~he~P~i~~~~ 303 (304)
...+++|||||+++||.|.|++++
T Consensus 202 ~~~~~~GHgIGl~~hE~P~i~~~~ 225 (291)
T PRK12318 202 VVDQFVGHGVGIKFHENPYVPHHR 225 (291)
T ss_pred cCCCcccCCcCccccCCCcccCcC
Confidence 878899999999999999997753
No 5
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=8.3e-42 Score=310.80 Aligned_cols=182 Identities=37% Similarity=0.623 Sum_probs=175.3
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCC
Q 021989 121 YQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPD 200 (304)
Q Consensus 121 R~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~ 200 (304)
..|||++||+.||+|+++++++++++.+.++||+||.||++.++..+.++|+.....+|.+||.++|+|.|+..+|+.|+
T Consensus 2 ~~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~~~~H~~p~ 81 (248)
T PRK12897 2 ITIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDEMCHAFPA 81 (248)
T ss_pred ceeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCCEeecCCCC
Confidence 36999999999999999999999999999999999999999999999999998766667889999999999999999999
Q ss_pred CCCCCCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCc
Q 021989 201 SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGV 280 (304)
Q Consensus 201 ~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~ 280 (304)
+++|++||+|++|+++.++||++|++|||++|+++++++++|++++++++++++++|||++++||+.++++++++.||..
T Consensus 82 ~~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~ 161 (248)
T PRK12897 82 DVPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSV 161 (248)
T ss_pred CcccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCcceeeecCCCCccCCCcCCC
Q 021989 281 VERFVGHGVGKVFHSEPIIYHN 302 (304)
Q Consensus 281 ~~~~~GHgIG~~~he~P~i~~~ 302 (304)
.++++|||||+++||.|.+.++
T Consensus 162 ~~~~~GHgiGl~~hE~P~i~~~ 183 (248)
T PRK12897 162 ARDFTGHGIGKEIHEEPAIFHF 183 (248)
T ss_pred CCCeEECccCCcccCCCccCCC
Confidence 8899999999999999999764
No 6
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.2e-41 Score=315.42 Aligned_cols=182 Identities=29% Similarity=0.529 Sum_probs=174.1
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCC----CCCCCeeeecCCCCccc
Q 021989 121 YQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGY----GGFPKSVCTSVNECMCH 196 (304)
Q Consensus 121 R~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y----~gfp~~v~sg~n~~~~H 196 (304)
..+||++||+.||+|+++++++++++.+.++||+||.||++.++..+.+.|+.|..+++ .+||+++|+|.|+.++|
T Consensus 2 ~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~H 81 (286)
T PRK07281 2 ITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVAH 81 (286)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEeccccccC
Confidence 46999999999999999999999999999999999999999999999999999887765 45999999999999999
Q ss_pred CCCCCCCCCCCCEEEEEeec---------------------------ccCcEEeceeeeEEccCCCHHHHHHHHHHHHHH
Q 021989 197 GIPDSRQLQDGDIINIDVTV---------------------------YLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECL 249 (304)
Q Consensus 197 ~~p~~r~l~~GDiv~iD~~~---------------------------~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~ 249 (304)
+.|++++|++||+|+||+++ .++||++|++|||++|+++++++++++++++++
T Consensus 82 ~~p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~~~~~~~~l~~~~~ea~ 161 (286)
T PRK07281 82 AFPRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGTPSDEVKNLMDVTKEAM 161 (286)
T ss_pred CCCCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999997 489999999999999999999999999999999
Q ss_pred HHHHHHccCCCcHHHHHHHHHHHHHHcCCCccCcceeeecCCCCccCCCcCCC
Q 021989 250 EKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHN 302 (304)
Q Consensus 250 ~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~ 302 (304)
+++++.+|||++++||++++++++++.||..+.+++|||||+++||.|+|+++
T Consensus 162 ~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~~~~~~GHGIGl~~hE~P~i~~~ 214 (286)
T PRK07281 162 YRGIEQAVVGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNY 214 (286)
T ss_pred HHHHHHhcCCCcHHHHHHHHHHHHHHcCCccCCCeeeeeCCCccCCCCcCCCc
Confidence 99999999999999999999999999999988899999999999999999764
No 7
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=2.2e-40 Score=300.71 Aligned_cols=181 Identities=48% Similarity=0.793 Sum_probs=174.9
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCCC
Q 021989 122 QIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDS 201 (304)
Q Consensus 122 ~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~~ 201 (304)
.|||++||+.||+|+++++++++++.+.++||+||.||++.++..+.++|+.+...+|.+||.++++|.|+.++|+.|++
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~H~~~~~ 81 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDK 81 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEeccccEEEecCCCC
Confidence 58999999999999999999999999999999999999999999999999998777788899999999999999999999
Q ss_pred CCCCCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCcc
Q 021989 202 RQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVV 281 (304)
Q Consensus 202 r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~ 281 (304)
++|++||+|++|+++.++||++|++|||++|+++++++++|+.++++++++++.+|||+++.||++++++++++.||...
T Consensus 82 ~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~ 161 (247)
T TIGR00500 82 KVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV 161 (247)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CcceeeecCCCCccCCCcCCC
Q 021989 282 ERFVGHGVGKVFHSEPIIYHN 302 (304)
Q Consensus 282 ~~~~GHgIG~~~he~P~i~~~ 302 (304)
.+++|||||+.+||.|.++++
T Consensus 162 ~~~~GHgiG~~~~e~p~i~~~ 182 (247)
T TIGR00500 162 REYCGHGIGRKFHEEPQIPNY 182 (247)
T ss_pred cCccCCccCcccCCCCccCCc
Confidence 889999999999999988764
No 8
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=2.5e-39 Score=294.88 Aligned_cols=182 Identities=45% Similarity=0.783 Sum_probs=174.6
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCC
Q 021989 119 PEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGI 198 (304)
Q Consensus 119 ~~R~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~ 198 (304)
+.+.|||++||+.||+|+++++++++++.+.++||+||.||++.+.+.+.+.|+.+++..+.+||.++|+|.|+..+|+.
T Consensus 6 ~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~h~~ 85 (255)
T PRK12896 6 RGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEEVAHGI 85 (255)
T ss_pred CceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCCeeEecC
Confidence 44679999999999999999999999999999999999999999999999999998887788899999999999999999
Q ss_pred CCCCCCCCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCC
Q 021989 199 PDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGF 278 (304)
Q Consensus 199 p~~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~ 278 (304)
|++++|++||+|++|+++.++||++|++|||++|+++++++++++.++++++++++.+|||++++||++++++++++.||
T Consensus 86 p~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G~ 165 (255)
T PRK12896 86 PGPRVIKDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGY 165 (255)
T ss_pred CCCccCCCCCEEEEEEeEEECcEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcceeeecCCCCccCCCcC
Q 021989 279 GVVERFVGHGVGKVFHSEPIIY 300 (304)
Q Consensus 279 ~~~~~~~GHgIG~~~he~P~i~ 300 (304)
....+++|||||+.+||.|.+.
T Consensus 166 ~~~~~~~GHgiG~~~he~p~~~ 187 (255)
T PRK12896 166 SVVRDLTGHGVGRSLHEEPSVI 187 (255)
T ss_pred EeccCcccCCcCcccccCCCcc
Confidence 8778999999999999999543
No 9
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=5.5e-39 Score=292.13 Aligned_cols=182 Identities=53% Similarity=0.865 Sum_probs=174.7
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCC
Q 021989 121 YQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPD 200 (304)
Q Consensus 121 R~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~ 200 (304)
..|||++||+.||+|+++++++++++.+.++||+||.||++.+.+.+.+.|+.+.+.++.+|+.++++|.|+..+|+.|+
T Consensus 3 ~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~~~ 82 (252)
T PRK05716 3 ITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIPS 82 (252)
T ss_pred eeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCCCC
Confidence 46999999999999999999999999999999999999999999999999998877677789999999999999999999
Q ss_pred CCCCCCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCc
Q 021989 201 SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGV 280 (304)
Q Consensus 201 ~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~ 280 (304)
+++|++||+|.+|+++.++||++|++|||++|+++++++++++.++++++++++++|||++++||++++++++++.|+..
T Consensus 83 ~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~ 162 (252)
T PRK05716 83 DKVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSV 162 (252)
T ss_pred CcccCCCCEEEEEEEEEECCEEEEeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCcceeeecCCCCccCCCcCCC
Q 021989 281 VERFVGHGVGKVFHSEPIIYHN 302 (304)
Q Consensus 281 ~~~~~GHgIG~~~he~P~i~~~ 302 (304)
.++++|||||+.+||.|.++++
T Consensus 163 ~~~~~GHgiG~~~~e~p~~~~~ 184 (252)
T PRK05716 163 VREYCGHGIGRKFHEEPQIPHY 184 (252)
T ss_pred ecCccccccCCccCCCCccCcC
Confidence 7889999999999999998764
No 10
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=5.1e-38 Score=300.41 Aligned_cols=180 Identities=20% Similarity=0.372 Sum_probs=168.6
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCccc
Q 021989 117 LSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCH 196 (304)
Q Consensus 117 l~~~R~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H 196 (304)
+.++|+|||++||+.||+|+++++++++.+.+.++||+||.||++.++..+.++|+.+. +|+++|++|.|...+|
T Consensus 121 ~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~G~~~~-----~f~~iv~sG~~~~~ph 195 (361)
T PRK09795 121 PDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEKA-----SFDTIVASGWRGALPH 195 (361)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHCCCCcC-----CCCeEEEEeccccccC
Confidence 67889999999999999999999999999999999999999999999999999998763 5899999999999999
Q ss_pred CCCCCCCCCCCCEEEEEeecccCcEEeceeeeEEccC--CCHH---HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHH
Q 021989 197 GIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGN--VSDG---LKRLVKVTEECLEKGIAVCKDGASFKKIGKRISE 271 (304)
Q Consensus 197 ~~p~~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~--~~~e---~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~ 271 (304)
+.|++++|++||+|++|+++.|+||++|++|||++|. ++++ ++++|+.++++++++++++|||++++||++++++
T Consensus 196 ~~~~~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~ 275 (361)
T PRK09795 196 GKASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARR 275 (361)
T ss_pred CCCCCceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999963 3333 7899999999999999999999999999999999
Q ss_pred HHHHcCCCc-cCcceeeecCCCCccCCCcCC
Q 021989 272 HAEKYGFGV-VERFVGHGVGKVFHSEPIIYH 301 (304)
Q Consensus 272 ~~~~~G~~~-~~~~~GHgIG~~~he~P~i~~ 301 (304)
++++.||.. +.|++|||||+++||.|.|..
T Consensus 276 ~~~~~g~~~~~~h~~GHgiGl~~he~p~i~~ 306 (361)
T PRK09795 276 VITEAGYGDYFGHNTGHAIGIEVHEDPRFSP 306 (361)
T ss_pred HHHHcCCCccCCCCCCccCCccccCCCCcCC
Confidence 999999985 468899999999999998853
No 11
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.2e-38 Score=302.08 Aligned_cols=185 Identities=30% Similarity=0.428 Sum_probs=174.0
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecC
Q 021989 111 STSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSV 190 (304)
Q Consensus 111 ~~~~~~l~~~R~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~ 190 (304)
.+....+.++|++||++||+.||+|+++++.++.++++.++||+||.||.+.++..+.+.|+... +|+++|++|.
T Consensus 142 ~~~~~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~G~~~~-----sf~~iv~~G~ 216 (384)
T COG0006 142 VDASDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKGGAEGP-----SFDTIVASGE 216 (384)
T ss_pred eccHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCcc-----CcCcEEeccc
Confidence 44556677899999999999999999999999999999999999999999999999999997642 4999999999
Q ss_pred CCCcccCCCCCCCCCCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHH
Q 021989 191 NECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRIS 270 (304)
Q Consensus 191 n~~~~H~~p~~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~ 270 (304)
|.+++|+.|+++.+++||+|+||+|+.|+|||+|+||||++|+++++++++|+.++++++++++++|||+++++|+.+++
T Consensus 217 n~a~pH~~~~~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G~~~~~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar 296 (384)
T COG0006 217 NAALPHYTPSDRKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAAR 296 (384)
T ss_pred cccCcCCCCCcccccCCCEEEEEeeeEECCccccceeEEecCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCc-cCcceeeecC--CCCccCCC-cC
Q 021989 271 EHAEKYGFGV-VERFVGHGVG--KVFHSEPI-IY 300 (304)
Q Consensus 271 ~~~~~~G~~~-~~~~~GHgIG--~~~he~P~-i~ 300 (304)
+++.+.||.. +.|.+|||+| +++||.|. +.
T Consensus 297 ~~i~~~g~~~~~~h~~GHgvG~~l~vhE~p~~~~ 330 (384)
T COG0006 297 QVLEKAGYGLYFLHGTGHGVGFVLDVHEHPQYLS 330 (384)
T ss_pred HHHHhcCCcccccCCccccCCCCcccCcCccccC
Confidence 9999988885 4667999999 99999994 44
No 12
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=5.2e-36 Score=270.37 Aligned_cols=172 Identities=56% Similarity=0.957 Sum_probs=166.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCC
Q 021989 129 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGD 208 (304)
Q Consensus 129 Ie~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~~r~l~~GD 208 (304)
|+.||+|+++++++++++.+.++||+||.||++.+.+.+.++|+.+.+.++.+|+..+++|.|+.++|+.|++++|++||
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~Gd 80 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGD 80 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCCCCCcccCCCC
Confidence 68999999999999999999999999999999999999999999988888888999999999999999999999999999
Q ss_pred EEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCccCcceeee
Q 021989 209 IINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHG 288 (304)
Q Consensus 209 iv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~GHg 288 (304)
+|.+|+++.++||++|++|||++|+++++++++++.+.++++++++++|||++++||++++++++++.|+....+++|||
T Consensus 81 ~v~id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~~~~~GHg 160 (238)
T cd01086 81 IVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREFGGHG 160 (238)
T ss_pred EEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcceecCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998777899999
Q ss_pred cCCCCccCCCcC
Q 021989 289 VGKVFHSEPIIY 300 (304)
Q Consensus 289 IG~~~he~P~i~ 300 (304)
||+.+||.|.+.
T Consensus 161 iG~~~~e~p~~~ 172 (238)
T cd01086 161 IGRKFHEEPQIP 172 (238)
T ss_pred CCCccccCCCcC
Confidence 999999999876
No 13
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=3.7e-36 Score=294.18 Aligned_cols=184 Identities=21% Similarity=0.313 Sum_probs=166.6
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCC
Q 021989 112 TSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVN 191 (304)
Q Consensus 112 ~~~~~l~~~R~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n 191 (304)
+..+.+.++|+|||++||+.||+|+++++.+++++++.++||+||.||++.+...+.++|+.. .+|+++|++|.|
T Consensus 162 d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~~~-----~~~~~iv~~G~n 236 (438)
T PRK10879 162 DWRPWVHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGARY-----PSYNTIVGSGEN 236 (438)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCC-----CCCCcEEEEcCc
Confidence 334556678999999999999999999999999999999999999999999999999999753 248899999999
Q ss_pred CCcccCCCCCCCCCCCCEEEEEeecccCcEEeceeeeEEc-cCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHH
Q 021989 192 ECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLC-GNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRIS 270 (304)
Q Consensus 192 ~~~~H~~p~~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~v-G~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~ 270 (304)
.+++|+.|++++|++||+|++|+|+.++||++|+||||++ |+++++++++|+.++++++++++++|||+++++|++++.
T Consensus 237 a~~~H~~~~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~ 316 (438)
T PRK10879 237 GCILHYTENESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLYRPGTSIREVTGEVV 316 (438)
T ss_pred cccccCCCCccccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 899999999999999999999999999999999999988
Q ss_pred HHHH------------------HcCCCc-cCcceeeecCCCCccCCCcC
Q 021989 271 EHAE------------------KYGFGV-VERFVGHGVGKVFHSEPIIY 300 (304)
Q Consensus 271 ~~~~------------------~~G~~~-~~~~~GHgIG~~~he~P~i~ 300 (304)
+++. +.++.. +.|.+||+||+++||.|.+.
T Consensus 317 ~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~~~ 365 (438)
T PRK10879 317 RIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGVYG 365 (438)
T ss_pred HHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCCcC
Confidence 6643 334432 46779999999999998763
No 14
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=9.5e-36 Score=280.89 Aligned_cols=185 Identities=20% Similarity=0.327 Sum_probs=166.9
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecC
Q 021989 111 STSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSV 190 (304)
Q Consensus 111 ~~~~~~l~~~R~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~ 190 (304)
.+..+.+.++|+|||++||+.||+|+++++++++++.+.++||+||.||++.++..+.+.|... +..| .++.+|.
T Consensus 83 ~d~~~~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~~G~tE~el~a~~~~~~~~~g~~~----~~~~-~~i~~G~ 157 (323)
T PRK15173 83 VDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETH----FSRF-HLISVGA 157 (323)
T ss_pred EEhHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC----CCCC-cEEEECC
Confidence 4455667899999999999999999999999999999999999999999999988888876532 1123 4666777
Q ss_pred CCCcccCCCCCCCCCCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHH
Q 021989 191 NECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRIS 270 (304)
Q Consensus 191 n~~~~H~~p~~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~ 270 (304)
+ ..+|+.|+++++++||+|++|+++.++||++|++|||++|+++++++++|+.++++++++++++|||++++||+++++
T Consensus 158 ~-~~~h~~~~~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~ 236 (323)
T PRK15173 158 D-FSPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTM 236 (323)
T ss_pred C-CccCCCCCCCccCCCCEEEEEeCccCCCEeeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 6 568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCc-cCcceeeecCC--CCccCCCcCC
Q 021989 271 EHAEKYGFGV-VERFVGHGVGK--VFHSEPIIYH 301 (304)
Q Consensus 271 ~~~~~~G~~~-~~~~~GHgIG~--~~he~P~i~~ 301 (304)
+++++.||.. ..+++|||||. .+||.|++..
T Consensus 237 ~~~~~~G~~~~~~~~~GHGiG~~lg~~E~P~i~~ 270 (323)
T PRK15173 237 EVIKKSGLPNYNRGHLGHGNGVFLGLEESPFVST 270 (323)
T ss_pred HHHHHcCCccccCCCCCCcCCCCCCcCCCCCCCC
Confidence 9999999974 46789999996 8999999864
No 15
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=1.6e-35 Score=287.43 Aligned_cols=186 Identities=19% Similarity=0.282 Sum_probs=168.5
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeec
Q 021989 110 SSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTS 189 (304)
Q Consensus 110 ~~~~~~~l~~~R~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg 189 (304)
..+..+.+.++|+|||++||+.||+|+++++++++++.+.++||+||.||++.++..+.+.|.... . +..++.+|
T Consensus 165 ~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~----~-~~~~v~~G 239 (406)
T PRK14575 165 FVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHF----S-RFHLISVG 239 (406)
T ss_pred EEEcHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcC----C-cCceEEEC
Confidence 345556678899999999999999999999999999999999999999999999998888776431 1 22467777
Q ss_pred CCCCcccCCCCCCCCCCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHH
Q 021989 190 VNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRI 269 (304)
Q Consensus 190 ~n~~~~H~~p~~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i 269 (304)
.+ ..+|+.|+++++++||+|++|+++.++||++|++|||++|+++++++++|+.++++++++++++|||++++||++++
T Consensus 240 ~~-~~~h~~~~~~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG~~~~~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~ 318 (406)
T PRK14575 240 AD-FSPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDST 318 (406)
T ss_pred CC-cccCCCCCCCcCCCCCEEEEEeceEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 77 67899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCc-cCcceeeecC--CCCccCCCcCC
Q 021989 270 SEHAEKYGFGV-VERFVGHGVG--KVFHSEPIIYH 301 (304)
Q Consensus 270 ~~~~~~~G~~~-~~~~~GHgIG--~~~he~P~i~~ 301 (304)
++++++.||.. ..+++||||| +.+||.|++.+
T Consensus 319 ~~~~~~~G~~~~~~~~~GHGiG~~lg~~e~P~i~~ 353 (406)
T PRK14575 319 MEVIKKSGLPNYNRGHLGHGNGVFLGLEESPFVST 353 (406)
T ss_pred HHHHHHcCCccccCCCCCCcccCCCCCccCCCCCC
Confidence 99999999984 4578999999 48999999875
No 16
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=9.6e-36 Score=287.62 Aligned_cols=183 Identities=15% Similarity=0.201 Sum_probs=161.9
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecC
Q 021989 111 STSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSV 190 (304)
Q Consensus 111 ~~~~~~l~~~R~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~ 190 (304)
.+..+.+.++|+|||++||++||+|+++++++++++.+.++||+||.||++.+.....+ +.......|.+|.+++.+|.
T Consensus 146 ~d~~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~-~~~~~g~~~~~~~~iv~sG~ 224 (391)
T TIGR02993 146 VDATALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIR-GVDGFGGDYPAIVPLLPSGA 224 (391)
T ss_pred EehHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhh-cccCcCCCcCCcccccccCc
Confidence 44556678899999999999999999999999999999999999999999988655432 11000001234667788999
Q ss_pred CCCcccCCCCCCCCCCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHH
Q 021989 191 NECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRIS 270 (304)
Q Consensus 191 n~~~~H~~p~~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~ 270 (304)
|...+|+.|++++|++||+|++|+++.|+||++|++|||++|+++++++++|+.++++++++++++|||++++||+++++
T Consensus 225 ~~a~pH~~~~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG~p~~~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~ 304 (391)
T TIGR02993 225 DASAPHLTWDDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFLGKPTQAFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFF 304 (391)
T ss_pred cccCCCCCCCCCcccCCCEEEEEeeeecccCccceeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCccCcceeeecCCCCcc
Q 021989 271 EHAEKYGFGVVERFVGHGVGKVFHS 295 (304)
Q Consensus 271 ~~~~~~G~~~~~~~~GHgIG~~~he 295 (304)
++++++||.. .|++|||||+++|+
T Consensus 305 ~~~~~~G~~~-~h~~GhgiGl~~~~ 328 (391)
T TIGR02993 305 AVLKKYGIHK-DSRTGYPIGLSYPP 328 (391)
T ss_pred HHHHHcCCcc-CCCceeeeccCcCC
Confidence 9999999974 68899999999874
No 17
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=3.8e-35 Score=264.12 Aligned_cols=169 Identities=22% Similarity=0.232 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCC-CCCCCCCCeeeecCCCCcccCCCCCCCCCCC
Q 021989 129 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSP-LGYGGFPKSVCTSVNECMCHGIPDSRQLQDG 207 (304)
Q Consensus 129 Ie~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~-l~y~gfp~~v~sg~n~~~~H~~p~~r~l~~G 207 (304)
|+.||+|+++++++++++.+.++||+||.||++.+.+.+.+.|+...+ ..|.++.+++++|.|+..+|+.|++++|++|
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~~r~l~~G 80 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINTDGAHNPVTNRKVQRG 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccccccCCCCCCcccCCC
Confidence 689999999999999999999999999999999999999999875321 2233344678999999999999999999999
Q ss_pred CEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCcc-Cccee
Q 021989 208 DIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVV-ERFVG 286 (304)
Q Consensus 208 Div~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~-~~~~G 286 (304)
|+|++|+++.++||++|++|||++|+++++++++++++.++++++++.+|||++++||++++++++++.||... .+.+|
T Consensus 81 D~v~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~~~~G 160 (228)
T cd01090 81 DILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRTFGYG 160 (228)
T ss_pred CEEEEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999864 55699
Q ss_pred eecCCCCccCC
Q 021989 287 HGVGKVFHSEP 297 (304)
Q Consensus 287 HgIG~~~he~P 297 (304)
||||+.+||.|
T Consensus 161 HgiGl~~he~~ 171 (228)
T cd01090 161 HSFGVLSHYYG 171 (228)
T ss_pred cccccccccCC
Confidence 99999999987
No 18
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=6.3e-35 Score=264.36 Aligned_cols=165 Identities=25% Similarity=0.360 Sum_probs=154.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCC
Q 021989 129 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGD 208 (304)
Q Consensus 129 Ie~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~~r~l~~GD 208 (304)
|++||+|+++++++++++.+.++||+||.||++.++..+.+.|+++ .|+.+|++|.|..++|+.|++++|++||
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~~------~~~~~v~~g~~~~~~H~~~~~~~l~~Gd 74 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARL------AYSYIVAAGSNAAILHYVHNDQPLKDGD 74 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCCc------CCCCeEEECCCccccCCCcCCCcCCCCC
Confidence 6899999999999999999999999999999999999999999873 3788999999999999999999999999
Q ss_pred EEEEEeecccCcEEeceeeeEEc-cCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCC---------
Q 021989 209 IINIDVTVYLNGYHGDTSKTFLC-GNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGF--------- 278 (304)
Q Consensus 209 iv~iD~~~~~~GY~~D~sRT~~v-G~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~--------- 278 (304)
+|++|+++.++||++|++|||++ |+++++++++++.++++++++++++|||++++||++++++++++.|+
T Consensus 75 ~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~ 154 (243)
T cd01087 75 LVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDV 154 (243)
T ss_pred EEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCch
Confidence 99999999999999999999999 69999999999999999999999999999999999999999987633
Q ss_pred ----------CccCcceeeecCCCCccCCCc
Q 021989 279 ----------GVVERFVGHGVGKVFHSEPII 299 (304)
Q Consensus 279 ----------~~~~~~~GHgIG~~~he~P~i 299 (304)
..+.|.+|||||+++||.|.+
T Consensus 155 ~~~~~~~~~~~~~~h~~GhgiGl~~~e~p~~ 185 (243)
T cd01087 155 DEIVESGAYAKFFPHGLGHYLGLDVHDVGGY 185 (243)
T ss_pred HhhhhhhhhhhhcCCCCccccCcccccCccc
Confidence 224567999999999999976
No 19
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=8.2e-35 Score=282.28 Aligned_cols=185 Identities=18% Similarity=0.241 Sum_probs=168.1
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecC
Q 021989 111 STSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSV 190 (304)
Q Consensus 111 ~~~~~~l~~~R~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~ 190 (304)
.+..+.+.++|+|||++||+.||+|++++++++.++.+.++||+||.||++.++..+.+.|... +. +..+|++|.
T Consensus 165 vd~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~----~~-~~~~v~~G~ 239 (405)
T PRK14576 165 VDSTALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMSFPETN----FS-RFNLISVGD 239 (405)
T ss_pred EEcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCc----CC-CCCEEEECC
Confidence 4445567889999999999999999999999999999999999999999999999999887531 11 225788888
Q ss_pred CCCcccCCCCCCCCCCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHH
Q 021989 191 NECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRIS 270 (304)
Q Consensus 191 n~~~~H~~p~~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~ 270 (304)
| ..+|+.|+++++++||+|++|+++.++||++|++|||++|+++++++++|+++.++++++++++|||++++||+++++
T Consensus 240 ~-~~~h~~~~~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~ 318 (405)
T PRK14576 240 N-FSPKIIADTTPAKVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTM 318 (405)
T ss_pred c-ccCCCCCCCcccCCCCEEEEEeceeECCEEeeeeEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 8 678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCc-cCcceeeecC--CCCccCCCcCC
Q 021989 271 EHAEKYGFGV-VERFVGHGVG--KVFHSEPIIYH 301 (304)
Q Consensus 271 ~~~~~~G~~~-~~~~~GHgIG--~~~he~P~i~~ 301 (304)
+++++.||.. ..+++||||| +.+||.|.+..
T Consensus 319 ~~~~~~G~~~~~~~~~GHgiG~~l~~~e~P~i~~ 352 (405)
T PRK14576 319 AVIKTSGLPHYNRGHLGHGDGVFLGLEEVPFVST 352 (405)
T ss_pred HHHHHcCCccccCCCCCCCCCCCCCcCcCCCcCC
Confidence 9999999974 4578999999 89999998753
No 20
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=3.5e-34 Score=252.32 Aligned_cols=168 Identities=27% Similarity=0.502 Sum_probs=159.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCC
Q 021989 129 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGD 208 (304)
Q Consensus 129 Ie~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~~r~l~~GD 208 (304)
|++||+|+++++.++.++.+.++||+||.||++.++..+.++|+++. +|+++|++|.|...+|+.|++++|++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~~-----~~~~~v~~g~~~~~~h~~~~~~~l~~gd 75 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEGP-----SFDTIVASGPNSALPHGVPSDRKIEEGD 75 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCC-----CCCcEEEECccccccCCCCCCcCcCCCC
Confidence 68999999999999999999999999999999999999999998742 4899999999999999999999999999
Q ss_pred EEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCc-cCcceee
Q 021989 209 IINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGV-VERFVGH 287 (304)
Q Consensus 209 iv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~-~~~~~GH 287 (304)
+|++|+++.++||++|++|||++|+++++++++++.+.++++++++.+|||++++||+++++++++++|+.. +.+.+||
T Consensus 76 ~v~id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh 155 (208)
T cd01092 76 LVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGH 155 (208)
T ss_pred EEEEEeeeeECCEeccceeEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999864 3567999
Q ss_pred ecCCCCccCCCcCC
Q 021989 288 GVGKVFHSEPIIYH 301 (304)
Q Consensus 288 gIG~~~he~P~i~~ 301 (304)
+||+.+||.|+|..
T Consensus 156 ~iG~~~~e~p~i~~ 169 (208)
T cd01092 156 GVGLEVHEAPYISP 169 (208)
T ss_pred ccCcccCcCCCcCC
Confidence 99999999998754
No 21
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=100.00 E-value=5.6e-34 Score=274.28 Aligned_cols=181 Identities=24% Similarity=0.384 Sum_probs=164.1
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCC----CCCCCCCeeeecCCCCccc
Q 021989 121 YQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPL----GYGGFPKSVCTSVNECMCH 196 (304)
Q Consensus 121 R~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l----~y~gfp~~v~sg~n~~~~H 196 (304)
-.+|+++||+.||+|++|++++++.+.+.++||+|+.||+..+++.+.+.++. ... ++.+|+..+|+|.|+++||
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~-~~~~~~~~~~g~afpt~vSvN~~v~H 89 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAK-IFKKEKEMEKGIAFPTCISVNNCVGH 89 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhh-hhcccccccCCCCCCeEEecCCeeeC
Confidence 46999999999999999999999999999999999999999999999987653 221 2445555567789999999
Q ss_pred CCC--C--CCCCCCCCEEEEEeecccCcEEeceeeeEEccC-----CCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHH
Q 021989 197 GIP--D--SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGN-----VSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGK 267 (304)
Q Consensus 197 ~~p--~--~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~-----~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~ 267 (304)
++| + +++|++||+|+||+|+.++||++|++|||++|+ ++++++++++++++|++++|+.+|||+++.||++
T Consensus 90 ~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ 169 (389)
T TIGR00495 90 FSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQVTE 169 (389)
T ss_pred CCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHH
Confidence 999 2 489999999999999999999999999999995 5678999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCccCcceeeecCCCCcc-CCCc-CCC
Q 021989 268 RISEHAEKYGFGVVERFVGHGVGKVFHS-EPII-YHN 302 (304)
Q Consensus 268 ~i~~~~~~~G~~~~~~~~GHgIG~~~he-~P~i-~~~ 302 (304)
+++++++++||.++++++|||||..+|+ .|.| +++
T Consensus 170 ai~~v~~~~G~~~v~~~~gH~igr~~~~g~~~Ii~~~ 206 (389)
T TIGR00495 170 AINKVAHSYGCTPVEGMLSHQLKQHVIDGEKVIISNP 206 (389)
T ss_pred HHHHHHHHcCCeecCCceeecccceeccCCCeeeecC
Confidence 9999999999999999999999999998 8885 554
No 22
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=1.6e-33 Score=248.54 Aligned_cols=165 Identities=32% Similarity=0.499 Sum_probs=153.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHH-HHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCC
Q 021989 130 AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQM-IIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGD 208 (304)
Q Consensus 130 e~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~-~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~~r~l~~GD 208 (304)
|+||+|+++++++++++++.++||+||.||.+.+.+. +.+.|... .+|++++++|.|..++|+.|++++|++||
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~-----~~~~~~~~~g~~~~~~~~~~~~~~l~~gd 75 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEE-----PAFPPIVGSGPNTDLPHYTPTDRRLQEGD 75 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTE-----ESSESEEEECCCCGETTTBCCSSBESTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCc-----ccCCceEecCCcceecceeccceeeecCC
Confidence 6899999999999999999999999999999999998 56667433 24889999999999999999999999999
Q ss_pred EEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCC-CccCcceee
Q 021989 209 IINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGF-GVVERFVGH 287 (304)
Q Consensus 209 iv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~-~~~~~~~GH 287 (304)
+|.+|+++.++||++|++|||++| ++++++++++.++++++.+++.+|||++++||++++.+.++++|| ..+.+.+||
T Consensus 76 ~v~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~~~~GH 154 (207)
T PF00557_consen 76 IVIIDFGPRYDGYHADIARTFVVG-PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGLEEPYPHGLGH 154 (207)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESS-SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTEGEEBTSSSEE
T ss_pred cceeeccceeeeeEeeeeeEEEEe-ecccccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhcccceeeecccc
Confidence 999999999999999999999999 999999999999999999999999999999999999999999999 456788999
Q ss_pred ecCCCCccC-CCcC
Q 021989 288 GVGKVFHSE-PIIY 300 (304)
Q Consensus 288 gIG~~~he~-P~i~ 300 (304)
|||+.+||. |+|.
T Consensus 155 ~iG~~~~~~~P~i~ 168 (207)
T PF00557_consen 155 GIGLEFHEPGPNIA 168 (207)
T ss_dssp EESSSSSEEEEEES
T ss_pred cccccccccceeee
Confidence 999999997 9986
No 23
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=1.1e-33 Score=276.71 Aligned_cols=179 Identities=19% Similarity=0.186 Sum_probs=155.1
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCC
Q 021989 113 SLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNE 192 (304)
Q Consensus 113 ~~~~l~~~R~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~ 192 (304)
+.+.+.++|+|||++||+.||+|+++++++++++++.++||+||.||++.+... .+..+. ..+|+++|++|.|.
T Consensus 151 l~~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~---~~~~~~---~~~y~~iva~G~na 224 (443)
T PRK13607 151 VLDYLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTA---TGQRDN---DVPYGNIVALNEHA 224 (443)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH---hCCCCc---CCCCCcEEEecCcc
Confidence 344567889999999999999999999999999999999999999999765433 222221 13589999999999
Q ss_pred CcccCCCCCC-CCCCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHH
Q 021989 193 CMCHGIPDSR-QLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISE 271 (304)
Q Consensus 193 ~~~H~~p~~r-~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~ 271 (304)
+++|+.++++ .+++||+|++|+|+.++||++|+||||+ |+++++++++|++++++++++++.+|||+++.||+.++++
T Consensus 225 a~~H~~~~~~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~ 303 (443)
T PRK13607 225 AVLHYTKLDHQAPAEMRSFLIDAGAEYNGYAADITRTYA-AKEDNDFAALIKDVNKEQLALIATMKPGVSYVDLHIQMHQ 303 (443)
T ss_pred eEecCCccCCCCCCCCCEEEEEeeEEECCEEecceEEEe-cCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHH
Confidence 9999999874 6899999999999999999999999999 8889999999999999999999999999999999998876
Q ss_pred HH----HHcCCC----------------ccCcceeeecCCCCccCCC
Q 021989 272 HA----EKYGFG----------------VVERFVGHGVGKVFHSEPI 298 (304)
Q Consensus 272 ~~----~~~G~~----------------~~~~~~GHgIG~~~he~P~ 298 (304)
++ .+.|+. .+.|.+||+||+++||.+.
T Consensus 304 ~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~ 350 (443)
T PRK13607 304 RIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAG 350 (443)
T ss_pred HHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCCC
Confidence 66 445544 2467799999999999854
No 24
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=100.00 E-value=2e-32 Score=266.32 Aligned_cols=174 Identities=23% Similarity=0.317 Sum_probs=156.6
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHc----CCCCCCCCCCCCCCeeeecCCCCcc
Q 021989 120 EYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEA----GAYPSPLGYGGFPKSVCTSVNECMC 195 (304)
Q Consensus 120 ~R~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~----G~~ps~l~y~gfp~~v~sg~n~~~~ 195 (304)
.+..+|++||+.||+|++|++++++.+.+.++||+|+.||+..++..+++. |+.. ..+||+ ++|.|++.+
T Consensus 149 ~~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~----g~aFPt--~vS~N~~aa 222 (470)
T PTZ00053 149 ELEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKC----GWAFPT--GCSLNHCAA 222 (470)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcc----cCCCCc--eeecCcccc
Confidence 445689999999999999999999999999999999999999888876654 5432 246888 457999999
Q ss_pred cCCCC---CCCCCCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHH
Q 021989 196 HGIPD---SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEH 272 (304)
Q Consensus 196 H~~p~---~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~ 272 (304)
|++|+ +++|++||+|.||+|+.++||++|++|||++| ++++++++++++|++++|++++||+++.||+++++++
T Consensus 223 H~tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg---~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqev 299 (470)
T PTZ00053 223 HYTPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN---PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEV 299 (470)
T ss_pred CCCCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 99995 68999999999999999999999999999987 6889999999999999999999999999999999999
Q ss_pred HHHcCCC---------ccCcceeeecCC-CCccCCCcCCC
Q 021989 273 AEKYGFG---------VVERFVGHGVGK-VFHSEPIIYHN 302 (304)
Q Consensus 273 ~~~~G~~---------~~~~~~GHgIG~-~~he~P~i~~~ 302 (304)
++++||. .+++++|||||+ .+|+.|.|+++
T Consensus 300 ies~G~e~~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP~v 339 (470)
T PTZ00053 300 IESYEVEIKGKTYPIKSIRNLNGHSIGPYIIHGGKSVPIV 339 (470)
T ss_pred HHHcCCcccCcccccccccCCcccCCCCccccCCCcCCee
Confidence 9999974 358999999998 89998887764
No 25
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=7.5e-32 Score=235.01 Aligned_cols=165 Identities=32% Similarity=0.560 Sum_probs=156.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCC
Q 021989 129 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGD 208 (304)
Q Consensus 129 Ie~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~~r~l~~GD 208 (304)
|+.||+|+++++++++.+.+.++||+||.||.+.+++.+.++|+++ .|+.++.+|.|..++|+.|+++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~------~~~~~v~~g~~~~~~h~~~~~~~i~~gd 74 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGGYP------AGPTIVGSGARTALPHYRPDDRRLQEGD 74 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcEEEECccccCcCCCCCCCCcCCCC
Confidence 5789999999999999999999999999999999999999999843 3778888998889999999999999999
Q ss_pred EEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCC-CccCcceee
Q 021989 209 IINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGF-GVVERFVGH 287 (304)
Q Consensus 209 iv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~-~~~~~~~GH 287 (304)
+|++|+++.++||++|++|||++|+++++++++++.+.++++.+++.+|||+++.||++++.+++++.|+ ....+++||
T Consensus 75 ~v~~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~~Gh 154 (207)
T cd01066 75 LVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHRTGH 154 (207)
T ss_pred EEEEEeceeECCCccceeceeEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 456788999
Q ss_pred ecCCCCccCCCc
Q 021989 288 GVGKVFHSEPII 299 (304)
Q Consensus 288 gIG~~~he~P~i 299 (304)
+||+.+||.|.+
T Consensus 155 ~iG~~~~e~~~~ 166 (207)
T cd01066 155 GIGLEIHEPPVL 166 (207)
T ss_pred ccCcccCCCCCc
Confidence 999999999974
No 26
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=1.2e-31 Score=240.76 Aligned_cols=165 Identities=18% Similarity=0.137 Sum_probs=149.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCC--CcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCC---CCCC
Q 021989 130 AKMRAACELAARVLDAAGKLVRPS--VTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPD---SRQL 204 (304)
Q Consensus 130 e~mR~A~~ia~~~l~~~~~~i~pG--vTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~---~r~l 204 (304)
+.||.+..+ .++++.+.+.++|| +||.||++.+++++.+.|.++. .+|+++||+|.|++++|+.|+ +++|
T Consensus 5 ~~~~~~~~~-~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~----~~f~~~v~~g~n~~~~H~~p~~~~~r~l 79 (224)
T cd01085 5 AHIRDGVAL-VEFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVG----LSFDTISGFGPNGAIVHYSPTEESNRKI 79 (224)
T ss_pred HHHHHHHHH-HHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcC----CCcceEEEecCccCcCCCCcCcccCccc
Confidence 356666666 59999999999999 9999999999988887765432 248999999999999999998 9999
Q ss_pred CCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHcc-CCCcHHHHHHHHHHHHHHcCCCccCc
Q 021989 205 QDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCK-DGASFKKIGKRISEHAEKYGFGVVER 283 (304)
Q Consensus 205 ~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~k-PG~~~~dI~~~i~~~~~~~G~~~~~~ 283 (304)
++||+|++|+++.++||++|++|||++|+++++++++++.+++++.++++.++ ||++..+|++++++.+.+.|+. +.|
T Consensus 80 ~~GD~V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~-~~h 158 (224)
T cd01085 80 SPDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLD-YGH 158 (224)
T ss_pred CCCCEEEEEeCccCCCcccccEEeecCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCC-CCC
Confidence 99999999999999999999999999999999999999999999999999884 9999999999999999999986 578
Q ss_pred ceeeecC--CCCccCCCcC
Q 021989 284 FVGHGVG--KVFHSEPIIY 300 (304)
Q Consensus 284 ~~GHgIG--~~~he~P~i~ 300 (304)
++||||| +++||.|.++
T Consensus 159 ~~GHgIG~~l~~hE~P~i~ 177 (224)
T cd01085 159 GTGHGVGSFLNVHEGPQSI 177 (224)
T ss_pred CCCCCCCCCCcCCCCCCcC
Confidence 8999999 6889999885
No 27
>PRK08671 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.2e-31 Score=249.67 Aligned_cols=164 Identities=33% Similarity=0.579 Sum_probs=153.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCC---CCCC
Q 021989 128 SIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPD---SRQL 204 (304)
Q Consensus 128 EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~---~r~l 204 (304)
+|++||+|+++++++++.+.+.++||+||.||++.+++.+.+.|+.++ ||+.| +.|+..+|+.|. +++|
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~~~a------fp~~v--s~n~~~~H~~p~~~d~~~l 72 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGAKPA------FPCNI--SINEVAAHYTPSPGDERVF 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCccC------CCCEE--eeCCCccCCCCCCCCCccc
Confidence 589999999999999999999999999999999999999999998764 78665 467788999985 6889
Q ss_pred CCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCccCcc
Q 021989 205 QDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERF 284 (304)
Q Consensus 205 ~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~ 284 (304)
++||+|++|+|+.++||++|++|||++| +++++++++++++++++++.+|||+++.||+++++++++++||..+.++
T Consensus 73 ~~GDvV~iD~G~~~dGY~aD~arT~~vG---~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~~~~ 149 (291)
T PRK08671 73 PEGDVVKLDLGAHVDGYIADTAVTVDLG---GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPIRNL 149 (291)
T ss_pred CCCCEEEEEEeEEECCEEEEEEEEEEeC---hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCcccCCC
Confidence 9999999999999999999999999998 4788999999999999999999999999999999999999999988899
Q ss_pred eeeecCC-CCccCCCcCCC
Q 021989 285 VGHGVGK-VFHSEPIIYHN 302 (304)
Q Consensus 285 ~GHgIG~-~~he~P~i~~~ 302 (304)
+|||||+ .+||.|.|++.
T Consensus 150 ~GHgiG~~~~he~p~ip~~ 168 (291)
T PRK08671 150 TGHGLERYELHAGPSIPNY 168 (291)
T ss_pred cccCcCCCcccCCCccCcc
Confidence 9999997 89999998764
No 28
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=99.98 E-value=2.4e-31 Score=247.94 Aligned_cols=165 Identities=30% Similarity=0.485 Sum_probs=153.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCC---CC
Q 021989 126 SESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPD---SR 202 (304)
Q Consensus 126 ~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~---~r 202 (304)
-+||++||+|+++++++++.+.+.++||+|+.||++.++..+.+.|+.++ ||+++ +.|++.+|+.|. ++
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~a------Fp~~v--s~n~~~~H~~p~~~d~~ 73 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEPA------FPCNI--SINECAAHFTPKAGDKT 73 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCC------CCcce--ecCCEeeCCCCCCCcCc
Confidence 47999999999999999999999999999999999999999999999863 88875 478999999985 67
Q ss_pred CCCCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCccC
Q 021989 203 QLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVE 282 (304)
Q Consensus 203 ~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~ 282 (304)
+|++||+|+||+|+.++||++|++|||++|+ ..+++++++++|++++++.+|||+++.||+++++++++++||..+.
T Consensus 74 ~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~---~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i~ 150 (295)
T TIGR00501 74 VFKDGDVVKLDLGAHVDGYIADTAITVDLGD---QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPIS 150 (295)
T ss_pred cCCCCCEEEEEEeEEECCEEEEEEEEEEeCc---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeeec
Confidence 8999999999999999999999999999985 3689999999999999999999999999999999999999999888
Q ss_pred cceeeecCC-CCccCCCcCC
Q 021989 283 RFVGHGVGK-VFHSEPIIYH 301 (304)
Q Consensus 283 ~~~GHgIG~-~~he~P~i~~ 301 (304)
+++|||||. ..|+.|.|++
T Consensus 151 ~~~GHgig~~~~h~g~~ip~ 170 (295)
T TIGR00501 151 NLTGHSMAPYRLHGGKSIPN 170 (295)
T ss_pred CCCCcceecccccCCCccCe
Confidence 999999995 8898876654
No 29
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.97 E-value=1.2e-30 Score=242.89 Aligned_cols=163 Identities=30% Similarity=0.493 Sum_probs=151.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCC---CCCCC
Q 021989 129 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPD---SRQLQ 205 (304)
Q Consensus 129 Ie~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~---~r~l~ 205 (304)
++.||+|+++++++++++.+.++||+||.||++.+++.+.+.|+.++ ||. ++|.|+..+|+.|. +++|+
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~a------fp~--~is~n~~~~H~~p~~~d~~~l~ 72 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGPA------FPV--NLSINECAAHYTPNAGDDTVLK 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC------CCc--eeccCCEeeCCCCCCCCCcccC
Confidence 36899999999999999999999999999999999999999998764 775 46899999999985 48999
Q ss_pred CCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCccCcce
Q 021989 206 DGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFV 285 (304)
Q Consensus 206 ~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~ 285 (304)
+||+|.+|+|+.++||++|++|||.+|+ ++++++++++++++++++.+|||+++.||+++++++++++||..+.+++
T Consensus 73 ~GDvV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~~~~~~~ 149 (291)
T cd01088 73 EGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPIRNLT 149 (291)
T ss_pred CCCEEEEEEEEEECCEEEEEEEEEecCh---hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCEEeecCC
Confidence 9999999999999999999999999985 7889999999999999999999999999999999999999999888999
Q ss_pred eeecCC-CCccCCCcCCC
Q 021989 286 GHGVGK-VFHSEPIIYHN 302 (304)
Q Consensus 286 GHgIG~-~~he~P~i~~~ 302 (304)
|||||. .+|+.|.|+..
T Consensus 150 GHgig~~~~h~~~~ip~~ 167 (291)
T cd01088 150 GHSIERYRLHAGKSIPNV 167 (291)
T ss_pred ccCccCccccCCCccCcc
Confidence 999995 89999887764
No 30
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=99.97 E-value=2.5e-30 Score=234.83 Aligned_cols=173 Identities=16% Similarity=0.241 Sum_probs=153.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH-----hcCCC--CcHHHHHHHHHHHHHHcCCC-----CCCCCCCCCCCeeeecCCC-Ccc
Q 021989 129 IAKMRAACELAARVLDAAGK-----LVRPS--VTTNEIDKAVHQMIIEAGAY-----PSPLGYGGFPKSVCTSVNE-CMC 195 (304)
Q Consensus 129 Ie~mR~A~~ia~~~l~~~~~-----~i~pG--vTe~eI~~~~~~~~~~~G~~-----ps~l~y~gfp~~v~sg~n~-~~~ 195 (304)
++.||+|++++..+|..... .|.+| +|+.+|+..++..+.+.+.. |..+. ..|+++|++|.|. ..+
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~~~~~-~~y~~iv~sG~~~~~l~ 79 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDPEQLD-WCYPPIIQSGGNYDLLK 79 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCHHHcC-cccCCeEeECcCcccCC
Confidence 46899999999999976555 89999 99999999999999988754 22222 3599999999999 899
Q ss_pred cCCCCCCCCCCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHH
Q 021989 196 HGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEK 275 (304)
Q Consensus 196 H~~p~~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~ 275 (304)
|+.++++.++.|++|++|+|++|+|||+|++|||++| ++++++++|+.++++++++++.+|||++++||++++.+++++
T Consensus 80 h~~~s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~ 158 (243)
T cd01091 80 SSSSSDKLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKK 158 (243)
T ss_pred CCCCCccccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999997 799999999999999999999999999999999999999999
Q ss_pred cCCCcc---CcceeeecCCCCccCCCcCCCC
Q 021989 276 YGFGVV---ERFVGHGVGKVFHSEPIIYHNR 303 (304)
Q Consensus 276 ~G~~~~---~~~~GHgIG~~~he~P~i~~~~ 303 (304)
.|+... .+.+|||||+++||.|.++..+
T Consensus 159 ~~~~~~~~~~~~~GHgiGle~hE~~~~l~~~ 189 (243)
T cd01091 159 KKPELEPNFTKNLGFGIGLEFRESSLIINAK 189 (243)
T ss_pred hChhHHHhCcCCcccccCcccccCccccCCC
Confidence 875543 4559999999999998765543
No 31
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=99.97 E-value=6.9e-30 Score=229.72 Aligned_cols=163 Identities=24% Similarity=0.427 Sum_probs=140.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcC--CCCC-CCCCCCCCCeeeecCCCCcccCCC----CC
Q 021989 129 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAG--AYPS-PLGYGGFPKSVCTSVNECMCHGIP----DS 201 (304)
Q Consensus 129 Ie~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G--~~ps-~l~y~gfp~~v~sg~n~~~~H~~p----~~ 201 (304)
+++||+|++|++++++++.+.++||+||.||+..+++.+.+.. .++. ..++.+++...+++.|+..+|+.| ++
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~~n~~~~H~~p~~~~~~ 80 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPLKSDAT 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEeccCceeecCCCCCCCCC
Confidence 3689999999999999999999999999999988888887742 2222 122333333334457999999996 68
Q ss_pred CCCCCCCEEEEEeecccCcEEeceeeeEEccCCCH-----HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHc
Q 021989 202 RQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSD-----GLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKY 276 (304)
Q Consensus 202 r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~-----e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~ 276 (304)
++|++||+|++|+++.++||++|++|||++|++++ ++++++++++++++++++.+|||++++||+++++++++++
T Consensus 81 ~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~ 160 (228)
T cd01089 81 YTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDY 160 (228)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHc
Confidence 89999999999999999999999999999998875 8999999999999999999999999999999999999999
Q ss_pred CCCccCcceeeecCC
Q 021989 277 GFGVVERFVGHGVGK 291 (304)
Q Consensus 277 G~~~~~~~~GHgIG~ 291 (304)
||.++..++||++|.
T Consensus 161 G~~~~~~~~~h~~g~ 175 (228)
T cd01089 161 GCTPVEGVLSHQLKR 175 (228)
T ss_pred CCEEecCccccCcCc
Confidence 998878887776665
No 32
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.95 E-value=2.6e-28 Score=228.33 Aligned_cols=182 Identities=22% Similarity=0.328 Sum_probs=167.0
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcc
Q 021989 116 DLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMC 195 (304)
Q Consensus 116 ~l~~~R~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~ 195 (304)
.+.++|.+||+.|++.||+||.|+.+++-..+-.-|+...|..+.+.++..++.+|++- ..||+.|+.|.|....
T Consensus 221 li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~rGad~-----~AYpPVVAgG~na~tI 295 (488)
T KOG2414|consen 221 LIERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRRGADR-----LAYPPVVAGGKNANTI 295 (488)
T ss_pred HHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeecCccc-----cccCCeeecCcccceE
Confidence 45678999999999999999999999999999999999999999999999999999975 3699999999999999
Q ss_pred cCCCCCCCCCCCCEEEEEeecccCcEEeceeeeEEc-cCCCHHHHHHHHHHHHHHHHHHHHccC--CCcHHHHHHHHHHH
Q 021989 196 HGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLC-GNVSDGLKRLVKVTEECLEKGIAVCKD--GASFKKIGKRISEH 272 (304)
Q Consensus 196 H~~p~~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~v-G~~~~e~~~l~~~~~ea~~~~i~~~kP--G~~~~dI~~~i~~~ 272 (304)
||.-++..|+++|+|++|.|+.++||++|+||||++ |+.++.|++||+++++.++.-|..|+| |.++.+|+....+.
T Consensus 296 HY~~Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~~~s~~L 375 (488)
T KOG2414|consen 296 HYVRNNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFERSNEL 375 (488)
T ss_pred EEeecccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 999999999999999999999999999 99999999877655
Q ss_pred HH----HcCCC------------ccCcceeeecCCCCccCCCcCCC
Q 021989 273 AE----KYGFG------------VVERFVGHGVGKVFHSEPIIYHN 302 (304)
Q Consensus 273 ~~----~~G~~------------~~~~~~GHgIG~~~he~P~i~~~ 302 (304)
+. +-|.. .++|.+||-+|+++|+.|-++.+
T Consensus 376 l~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLGmDVHD~p~v~r~ 421 (488)
T KOG2414|consen 376 LGQELKELGIRKTDREEMIQAEKLCPHHVGHYLGMDVHDCPTVSRD 421 (488)
T ss_pred HHHHHHHhCcccchHHHHHhhhhcCCcccchhcCcccccCCCCCCC
Confidence 54 34432 35788999999999999998765
No 33
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=99.95 E-value=3.4e-27 Score=218.92 Aligned_cols=178 Identities=19% Similarity=0.226 Sum_probs=160.5
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCc
Q 021989 115 PDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECM 194 (304)
Q Consensus 115 ~~l~~~R~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~ 194 (304)
|.+.+.|.|||+.||+.||.|++|+++++.++++.++||+.|.++...+.......|.--+ .+|..|.|+|.|..+
T Consensus 177 p~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh----~sYtcIc~sG~ns~v 252 (492)
T KOG2737|consen 177 PILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRH----LSYTCICASGDNSAV 252 (492)
T ss_pred HHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCccc----cccceeeecCCCcce
Confidence 5678899999999999999999999999999999999999999999999999998876322 258889999999999
Q ss_pred ccC----CCCCCCCCCCCEEEEEeecccCcEEeceeeeEEc-cCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHH
Q 021989 195 CHG----IPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLC-GNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRI 269 (304)
Q Consensus 195 ~H~----~p~~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~v-G~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i 269 (304)
.|| .|+++.+++||.+++|+|+.|.+|.+|+|++|+. |+.+++|+.+|++++++..++++.+|||+...|++...
T Consensus 253 LHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~KpGv~W~Dmh~La 332 (492)
T KOG2737|consen 253 LHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKPGVWWVDMHKLA 332 (492)
T ss_pred eeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCccccHHHHH
Confidence 998 8999999999999999999999999999999999 99999999999999999999999999999999998766
Q ss_pred HHHHH----HcCC---------------CccCcceeeecCCCCccC
Q 021989 270 SEHAE----KYGF---------------GVVERFVGHGVGKVFHSE 296 (304)
Q Consensus 270 ~~~~~----~~G~---------------~~~~~~~GHgIG~~~he~ 296 (304)
.+++- +.|. ..++|-+||-+|+++|+.
T Consensus 333 ~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lGlDvHDv 378 (492)
T KOG2737|consen 333 EKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLGLDVHDV 378 (492)
T ss_pred HHHHHHHHHhcCceeccHHHHHHhccCeeecccccccccccccccc
Confidence 55443 3332 235778999999999985
No 34
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=99.80 E-value=7.1e-19 Score=174.73 Aligned_cols=199 Identities=17% Similarity=0.292 Sum_probs=165.6
Q ss_pred CCCCCCCcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHH-----HHhcCCC--CcHHHHHHHHHHHHHHc---
Q 021989 101 DHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAA-----GKLVRPS--VTTNEIDKAVHQMIIEA--- 170 (304)
Q Consensus 101 ~~i~~p~y~~~~~~~~l~~~R~vKs~~EIe~mR~A~~ia~~~l~~~-----~~~i~pG--vTe~eI~~~~~~~~~~~--- 170 (304)
+.+....|...++...+..+-.||++.||+.+|+|+.++..+|... ...|..+ ||...+...+...+.+.
T Consensus 115 ~~l~~~~fn~vDis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s 194 (960)
T KOG1189|consen 115 KRLEAGGFNKVDISLGLSKLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYS 194 (960)
T ss_pred HHhhhcCCceeehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccC
Confidence 3344456666777777888899999999999999999999999843 3345544 78888888888777665
Q ss_pred -CCCCCCCCCCCCCCeeeecCCCCc-ccCCCCCCCCCCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHH
Q 021989 171 -GAYPSPLGYGGFPKSVCTSVNECM-CHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEEC 248 (304)
Q Consensus 171 -G~~ps~l~y~gfp~~v~sg~n~~~-~H~~p~~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea 248 (304)
|..|..+. +.||+|+.+|.+-.. +-...+++.| + +|+..+|++|++||++++|||++ .|+.++++.|+..+.+
T Consensus 195 ~~l~~~~~d-~cY~PIiqSGg~ydlk~sa~s~~~~L--~-~I~cs~G~RynsYCSNv~RT~Li-dpssemq~nY~fLl~a 269 (960)
T KOG1189|consen 195 PGLDPDLLD-MCYPPIIQSGGKYDLKPSAVSDDNHL--H-VILCSLGIRYNSYCSNVSRTYLI-DPSSEMQENYEFLLAA 269 (960)
T ss_pred cccCccccc-cccChhhhcCCccccccccccccccc--c-eEEeeccchhhhhhccccceeee-cchHHHHHHHHHHHHH
Confidence 44444344 459999999988754 3345567777 3 99999999999999999999999 5899999999999999
Q ss_pred HHHHHHHccCCCcHHHHHHHHHHHHHHcCCCccCcc---eeeecCCCCccCCCcCCCCC
Q 021989 249 LEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERF---VGHGVGKVFHSEPIIYHNRK 304 (304)
Q Consensus 249 ~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~---~GHgIG~~~he~P~i~~~~n 304 (304)
+++++..||||+..++||+++.+++++.+...+..| +|.|||++|+|.-++.+.+|
T Consensus 270 qe~il~~lrpG~ki~dVY~~~l~~v~k~~Pel~~~~~k~lG~~iGlEFREssl~inaKn 328 (960)
T KOG1189|consen 270 QEEILKLLRPGTKIGDVYEKALDYVEKNKPELVPNFTKNLGFGIGLEFRESSLVINAKN 328 (960)
T ss_pred HHHHHHhhcCCCchhHHHHHHHHHHHhcCcchhhhhhhhcccccceeeecccccccccc
Confidence 999999999999999999999999999998877666 89999999999999988776
No 35
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.70 E-value=1.7e-16 Score=155.71 Aligned_cols=185 Identities=16% Similarity=0.114 Sum_probs=156.2
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHh----cCCC--CcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeee
Q 021989 114 LPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKL----VRPS--VTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVC 187 (304)
Q Consensus 114 ~~~l~~~R~vKs~~EIe~mR~A~~ia~~~l~~~~~~----i~pG--vTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~ 187 (304)
.+.+..++.+|..+|++.||.+----..|+-+.+.. +.-| +||.+++..++++-.++..+-. -+|++|..
T Consensus 298 ~Spi~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmg----lSFeTIS~ 373 (606)
T KOG2413|consen 298 PSPISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMG----LSFETISS 373 (606)
T ss_pred cCHHHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccC----cCcceeec
Confidence 445566789999999999998765555555554444 4456 8999999999998887765433 25999996
Q ss_pred e-cCCCCcccCCCC---CCCCCCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccC-CCcH
Q 021989 188 T-SVNECMCHGIPD---SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKD-GASF 262 (304)
Q Consensus 188 s-g~n~~~~H~~p~---~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kP-G~~~ 262 (304)
+ |.|.++.||.|. ++.+-+..+.++|-|+.|..=..|+|||+.+|+|++++++.|..++...-+..++.-| |+..
T Consensus 374 s~G~NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~yT~VLkGhi~la~~vFP~~t~g 453 (606)
T KOG2413|consen 374 SVGPNGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAYTLVLKGHIALARAVFPKGTKG 453 (606)
T ss_pred cCCCCceeeecCCCccccceecCceEEEEccCcccccCccceeEEEecCCCCHHHHHHHHHHHHhhhHhhhcccCCCCCc
Confidence 6 999999999985 4589999999999999987788999999999999999999999999999999988887 7888
Q ss_pred HHHHHHHHHHHHHcCCCccCcceeeecCC--CCccCCCcCCCC
Q 021989 263 KKIGKRISEHAEKYGFGVVERFVGHGVGK--VFHSEPIIYHNR 303 (304)
Q Consensus 263 ~dI~~~i~~~~~~~G~~~~~~~~GHgIG~--~~he~P~i~~~~ 303 (304)
..++..++..+.+.|.. +.|-+|||||- .+||.|....++
T Consensus 454 ~~lD~laR~~LW~~gLD-y~HgTGHGVG~fLnVhE~P~~is~r 495 (606)
T KOG2413|consen 454 SVLDALARSALWKAGLD-YGHGTGHGVGSFLNVHEGPIGIGYR 495 (606)
T ss_pred chhHHHHHHHHHhhccc-cCCCCCcccccceEeccCCceeeee
Confidence 88889999999999987 68889999997 899999876554
No 36
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.63 E-value=5.1e-15 Score=137.35 Aligned_cols=165 Identities=27% Similarity=0.480 Sum_probs=139.5
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHc-C-CCCC-CCCCCC--CCCeeeecCCCCcc
Q 021989 121 YQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEA-G-AYPS-PLGYGG--FPKSVCTSVNECMC 195 (304)
Q Consensus 121 R~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~-G-~~ps-~l~y~g--fp~~v~sg~n~~~~ 195 (304)
..+-++.-...+|-|++|+..++..+.+++.||.+..||...-..++.+. | .|-. --.+.| ||+ |+++|+++|
T Consensus 13 ~tia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT--~Isvnncv~ 90 (398)
T KOG2776|consen 13 KTIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPT--SISVNNCVC 90 (398)
T ss_pred cccccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccc--eecccceee
Confidence 45678889999999999999999999999999999999998888887765 2 2222 111122 555 567999999
Q ss_pred cCCC---C-CCCCCCCCEEEEEeecccCcEEeceeeeEEccCC-----CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHH
Q 021989 196 HGIP---D-SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNV-----SDGLKRLVKVTEECLEKGIAVCKDGASFKKIG 266 (304)
Q Consensus 196 H~~p---~-~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~-----~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~ 266 (304)
|+.| + +..|++||+|.||+|+..+||.+-++.|++|+.+ .....+++.++..|.++++..++||.+--+|-
T Consensus 91 h~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~~~~vtG~kADvI~AAh~A~eaa~rllkpgn~n~~vT 170 (398)
T KOG2776|consen 91 HFSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAPDTPVTGRKADVIAAAHLAAEAALRLLKPGNTNTQVT 170 (398)
T ss_pred ccCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEeccCCCCcccCchhHHHHHHHHHHHHHHHHhCCCCCCchhh
Confidence 9988 2 6789999999999999999999999999999854 35778999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCccCcceee
Q 021989 267 KRISEHAEKYGFGVVERFVGH 287 (304)
Q Consensus 267 ~~i~~~~~~~G~~~~~~~~GH 287 (304)
++|.+.+..+++..+....-|
T Consensus 171 ~~i~k~aas~~c~pVegmlsh 191 (398)
T KOG2776|consen 171 RAIVKTAASYGCKPVEGMLSH 191 (398)
T ss_pred HHHHHHHHHhCCcccccchhH
Confidence 999999999999876554444
No 37
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=99.52 E-value=1.6e-13 Score=124.81 Aligned_cols=168 Identities=23% Similarity=0.371 Sum_probs=140.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHH----HcCCCCCCCCCCCCCCeeeecCCCCcccCCC
Q 021989 124 HDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMII----EAGAYPSPLGYGGFPKSVCTSVNECMCHGIP 199 (304)
Q Consensus 124 Ks~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~----~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p 199 (304)
-..+...-+|+|+++.+++-.++...|+||||--||...++...+ +.|.... -+||+. .|.|.|..|+.|
T Consensus 80 ~~~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~aG----i~FPtG--~SlN~cAAHyTp 153 (397)
T KOG2775|consen 80 TESDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNAG----IGFPTG--CSLNHCAAHYTP 153 (397)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccccc----ccCCCc--ccccchhhhcCC
Confidence 345567789999999999999999999999999999998887554 3343322 258876 578999999998
Q ss_pred C---CCCCCCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHc
Q 021989 200 D---SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKY 276 (304)
Q Consensus 200 ~---~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~ 276 (304)
+ ..+|+.+|++.||+|...+|-..|.+-|+.+ ++....|+.+++++...+|+...-.+++.||+++|+++++.+
T Consensus 154 NaGd~tVLqydDV~KiDfGthi~GrIiDsAFTv~F---~p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiqEVmeSy 230 (397)
T KOG2775|consen 154 NAGDKTVLKYDDVMKIDFGTHIDGRIIDSAFTVAF---NPKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQEVMESY 230 (397)
T ss_pred CCCCceeeeecceEEEeccccccCeEeeeeeEEee---CccccHHHHHHHHHHhhhhhhcCceeeehhhhHHHHHHhhhe
Confidence 4 4789999999999999999999999999997 456778999999999999999999999999999999999987
Q ss_pred CCCc---------cCcceeeecCC-CCccCCCcC
Q 021989 277 GFGV---------VERFVGHGVGK-VFHSEPIIY 300 (304)
Q Consensus 277 G~~~---------~~~~~GHgIG~-~~he~P~i~ 300 (304)
-..+ ++.+.||.|+. -+|..-.||
T Consensus 231 EvEi~Gk~~~VKpIrnLnGHSI~~yrIH~gksVP 264 (397)
T KOG2775|consen 231 EVEINGKTYQVKPIRNLNGHSIAQYRIHGGKSVP 264 (397)
T ss_pred EEEeCCceecceeccccCCCcccceEeecCcccc
Confidence 4432 57789999997 455554444
No 38
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.49 E-value=1.4e-13 Score=135.22 Aligned_cols=192 Identities=16% Similarity=0.194 Sum_probs=146.9
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHhcC----CC--CcHHHHHHHHHHHHHHcCC-----------
Q 021989 110 SSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVR----PS--VTTNEIDKAVHQMIIEAGA----------- 172 (304)
Q Consensus 110 ~~~~~~~l~~~R~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~----pG--vTe~eI~~~~~~~~~~~G~----------- 172 (304)
..|++..+.++-.+|+++||+.+|.+.+.....|+...+.+. .+ +|...+...+...+-+.-.
T Consensus 157 ~~DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l~~~ 236 (1001)
T COG5406 157 ASDVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKLGDI 236 (1001)
T ss_pred hhhhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCcccccc
Confidence 355666677788999999999999999999999985443322 22 4555555444443322111
Q ss_pred CCCCCCCCCCCCeeeecCCCC-cccCCCCCCCCCCCCEEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHH
Q 021989 173 YPSPLGYGGFPKSVCTSVNEC-MCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEK 251 (304)
Q Consensus 173 ~ps~l~y~gfp~~v~sg~n~~-~~H~~p~~r~l~~GDiv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ 251 (304)
.-..+.| .|.+|+.+|..-- .+-....+..+ .||+|...+|.+|+|||++++||+++ +|+.++++-|+.++.+++.
T Consensus 237 ~~d~lew-~ytpiiqsg~~~Dl~psa~s~~~~l-~gd~vl~s~GiRYn~YCSn~~RT~l~-dp~~e~~~Ny~fl~~lQk~ 313 (1001)
T COG5406 237 DLDQLEW-CYTPIIQSGGSIDLTPSAFSFPMEL-TGDVVLLSIGIRYNGYCSNMSRTILT-DPDSEQQKNYEFLYMLQKY 313 (1001)
T ss_pred chhhhhh-hcchhhccCceeecccccccCchhh-cCceEEEEeeeeeccccccccceEEe-CCchHhhhhHHHHHHHHHH
Confidence 1111222 3778888876543 23333445555 48899999999999999999999999 5899999999999999999
Q ss_pred HHHHccCCCcHHHHHHHHHHHHHHcCCCccCcc---eeeecCCCCccCCCcCCCCC
Q 021989 252 GIAVCKDGASFKKIGKRISEHAEKYGFGVVERF---VGHGVGKVFHSEPIIYHNRK 304 (304)
Q Consensus 252 ~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~---~GHgIG~~~he~P~i~~~~n 304 (304)
.+..||||+..++||..+.+++.+.|....+.| +|-+||++|++.-.+.+-+|
T Consensus 314 i~~~~rpG~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~igiefR~s~~~~nvkn 369 (1001)
T COG5406 314 ILGLVRPGTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIGIEFRSSQKPFNVKN 369 (1001)
T ss_pred HHhhcCCCCCchhHHHHHHHHHHhcCCccCchHhhhhhhhccccccccccceeccC
Confidence 999999999999999999999999999887777 89999999999877766554
No 39
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=97.37 E-value=0.0029 Score=54.45 Aligned_cols=102 Identities=24% Similarity=0.277 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCE
Q 021989 130 AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDI 209 (304)
Q Consensus 130 e~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~~r~l~~GDi 209 (304)
+.+|++.+.+.++++.+.+.++||++..||...+.+.+.+.|.........|+ .+-....+...-....+.+|++|.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~~Gh--~iG~~~~e~~~~~~~~~~~l~~gmv 179 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHRTGH--GIGLEIHEPPVLKAGDDTVLEPGMV 179 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCCCcc--ccCcccCCCCCcCCCCCCCcCCCCE
Confidence 57888999999999999999999999999999999999999874211111111 1111111111001124678999999
Q ss_pred EEEEeecccC-cEEeceeeeEEccC
Q 021989 210 INIDVTVYLN-GYHGDTSKTFLCGN 233 (304)
Q Consensus 210 v~iD~~~~~~-GY~~D~sRT~~vG~ 233 (304)
+.++.+.+.. ++..-+..|+++.+
T Consensus 180 ~~iep~~~~~~~~g~~~ed~v~vt~ 204 (207)
T cd01066 180 FAVEPGLYLPGGGGVRIEDTVLVTE 204 (207)
T ss_pred EEECCEEEECCCcEEEeeeEEEEeC
Confidence 9999998876 58888999998853
No 40
>PRK05716 methionine aminopeptidase; Validated
Probab=97.17 E-value=0.0046 Score=56.01 Aligned_cols=102 Identities=16% Similarity=0.184 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccC-C-CCCCCCCCCC
Q 021989 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHG-I-PDSRQLQDGD 208 (304)
Q Consensus 131 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~-~-p~~r~l~~GD 208 (304)
..|++.+.+.++.+++.+.++||++-.||..++++.+.+.|..+. ..+.|+.-.+..-..-.+.++ . .++.+|++|.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~~-~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gm 197 (252)
T PRK05716 119 EDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSVV-REYCGHGIGRKFHEEPQIPHYGAPGDGPVLKEGM 197 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeee-cCccccccCCccCCCCccCcCCCCCCCCEecCCC
Confidence 457778888899999999999999999999999999999987652 223232221111111111222 1 2467899999
Q ss_pred EEEEEeeccc------------------CcEEeceeeeEEccC
Q 021989 209 IINIDVTVYL------------------NGYHGDTSKTFLCGN 233 (304)
Q Consensus 209 iv~iD~~~~~------------------~GY~~D~sRT~~vG~ 233 (304)
++.|+-+.+. +++..-+..|++|.+
T Consensus 198 v~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~ 240 (252)
T PRK05716 198 VFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTE 240 (252)
T ss_pred EEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcC
Confidence 9999987653 346667788888854
No 41
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=97.14 E-value=0.0065 Score=53.03 Aligned_cols=99 Identities=24% Similarity=0.296 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCC-CcccCCC-CCCCCCCC
Q 021989 130 AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNE-CMCHGIP-DSRQLQDG 207 (304)
Q Consensus 130 e~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~-~~~H~~p-~~r~l~~G 207 (304)
+.+|++.+.+.++++.+.+.++||++..||.+.+++.+.+.|..+......|+. +|.+. -.+...+ ++++|++|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh~----iG~~~~e~p~i~~~~~~~l~~g 178 (208)
T cd01092 103 DELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGHG----VGLEVHEAPYISPGSDDVLEEG 178 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCccc----cCcccCcCCCcCCCCCCCcCCC
Confidence 466788999999999999999999999999999999999999743211111111 12110 0011112 46889999
Q ss_pred CEEEEEeecccCcE-EeceeeeEEcc
Q 021989 208 DIINIDVTVYLNGY-HGDTSKTFLCG 232 (304)
Q Consensus 208 Div~iD~~~~~~GY-~~D~sRT~~vG 232 (304)
.++.|+.+.+..|+ -.-+..|+++.
T Consensus 179 mv~~iep~~~~~~~~g~~~ed~v~vt 204 (208)
T cd01092 179 MVFTIEPGIYIPGKGGVRIEDDVLVT 204 (208)
T ss_pred CEEEECCeEEecCCCEEEeeeEEEEC
Confidence 99999988765433 44467888874
No 42
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=97.03 E-value=0.0092 Score=53.97 Aligned_cols=100 Identities=16% Similarity=0.153 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCC--CcccCC--CCCCCCCC
Q 021989 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNE--CMCHGI--PDSRQLQD 206 (304)
Q Consensus 131 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~--~~~H~~--p~~r~l~~ 206 (304)
..|++.+.+.++++++.+.++||+|-.||..++.+.+.+.|..+. ..+.|+ .+.....+ .++.+. .++.+|++
T Consensus 117 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~-~~~~GH--giG~~~~e~p~i~~~~~~~~~~~l~~ 193 (247)
T TIGR00500 117 EAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV-REYCGH--GIGRKFHEEPQIPNYGKKFTNVRLKE 193 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-cCccCC--ccCcccCCCCccCCcCcCCCCCEecC
Confidence 356778888899999999999999999999999999999987652 122222 12111111 122221 23688999
Q ss_pred CCEEEEEeeccc------------------CcEEeceeeeEEccC
Q 021989 207 GDIINIDVTVYL------------------NGYHGDTSKTFLCGN 233 (304)
Q Consensus 207 GDiv~iD~~~~~------------------~GY~~D~sRT~~vG~ 233 (304)
|.++.|+-+.+. +++..-+..|++|.+
T Consensus 194 gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~ 238 (247)
T TIGR00500 194 GMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITD 238 (247)
T ss_pred CCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcC
Confidence 999999987654 345666788888853
No 43
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.94 E-value=0.013 Score=52.52 Aligned_cols=102 Identities=17% Similarity=0.221 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcc-cCCC-CCCCCCCCC
Q 021989 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMC-HGIP-DSRQLQDGD 208 (304)
Q Consensus 131 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~-H~~p-~~r~l~~GD 208 (304)
.+|++.+.+.++.+++.+.++||++-.||.+++++.+.+.|... ...+.|+.-.+.......+. +..+ ++.+|++|.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~-~~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gm 187 (238)
T cd01086 109 EAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSV-VREFGGHGIGRKFHEEPQIPNYGRPGTGPKLKPGM 187 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcce-ecCccccCCCCccccCCCcCCccCCCCCCEecCCC
Confidence 45678888899999999999999999999999999999998754 22232222111111111111 2223 368899999
Q ss_pred EEEEEeeccc------------------CcEEeceeeeEEccC
Q 021989 209 IINIDVTVYL------------------NGYHGDTSKTFLCGN 233 (304)
Q Consensus 209 iv~iD~~~~~------------------~GY~~D~sRT~~vG~ 233 (304)
++.++-+.+. +.+..-+..|++|.+
T Consensus 188 v~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~Vte 230 (238)
T cd01086 188 VFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITE 230 (238)
T ss_pred EEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEEEcC
Confidence 9999988764 234555677888853
No 44
>PRK15173 peptidase; Provisional
Probab=96.90 E-value=0.012 Score=55.88 Aligned_cols=102 Identities=13% Similarity=0.107 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCC-CCCCCCCCCC
Q 021989 130 AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGI-PDSRQLQDGD 208 (304)
Q Consensus 130 e~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~-p~~r~l~~GD 208 (304)
+..|++.+++.++.+++.+.++||++-.||...+.+.+.+.|.......+.|+.-.+..|..+. +... .++.+|++|.
T Consensus 202 ~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~E~-P~i~~~~~~~Le~GM 280 (323)
T PRK15173 202 EITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEES-PFVSTHATESFTSGM 280 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCcCCCCCCcCCC-CCCCCCCCCccCCCC
Confidence 3457788899999999999999999999999999999999986432212112211111233321 1111 2467899999
Q ss_pred EEEEEeecccCc-EEeceeeeEEcc
Q 021989 209 IINIDVTVYLNG-YHGDTSKTFLCG 232 (304)
Q Consensus 209 iv~iD~~~~~~G-Y~~D~sRT~~vG 232 (304)
++.|+-+.+..| +-.-+..|++|.
T Consensus 281 V~tiEPgiy~~g~ggvriEDtvlVT 305 (323)
T PRK15173 281 VLSLETPYYGYNLGSIMIEDMILIN 305 (323)
T ss_pred EEEECCEEEcCCCcEEEEeeEEEEc
Confidence 999999876433 335678999884
No 45
>PRK12897 methionine aminopeptidase; Reviewed
Probab=96.81 E-value=0.012 Score=53.55 Aligned_cols=100 Identities=16% Similarity=0.204 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCC--CcccCC-C-CCCCCCC
Q 021989 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNE--CMCHGI-P-DSRQLQD 206 (304)
Q Consensus 131 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~--~~~H~~-p-~~r~l~~ 206 (304)
..|++.+++.++++.+.+.++||++..|++.++.+.+.+.|.... .++.|+. |-.+..+ .+.++. + +..+|++
T Consensus 118 ~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~~-~~~~GHg--iGl~~hE~P~i~~~~~~~~~~~l~~ 194 (248)
T PRK12897 118 EAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSVA-RDFTGHG--IGKEIHEEPAIFHFGKQGQGPELQE 194 (248)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCccC-CCeEECc--cCCcccCCCccCCCCCCCCCCCcCC
Confidence 356777888999999999999999999999999999999986532 2222221 1112111 222221 2 3468999
Q ss_pred CCEEEEEeecc-----------------cCc-EEeceeeeEEccC
Q 021989 207 GDIINIDVTVY-----------------LNG-YHGDTSKTFLCGN 233 (304)
Q Consensus 207 GDiv~iD~~~~-----------------~~G-Y~~D~sRT~~vG~ 233 (304)
|.++.+.-+.+ .+| +..-+..|++|.+
T Consensus 195 Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~ 239 (248)
T PRK12897 195 GMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITK 239 (248)
T ss_pred CCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeC
Confidence 99999998876 244 6677888888853
No 46
>PRK14575 putative peptidase; Provisional
Probab=96.75 E-value=0.016 Score=56.57 Aligned_cols=101 Identities=13% Similarity=0.140 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCC--CcccCCCCCCCCCCCC
Q 021989 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNE--CMCHGIPDSRQLQDGD 208 (304)
Q Consensus 131 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~--~~~H~~p~~r~l~~GD 208 (304)
..|++.+++.++.+++.+.++||++-.||++++.+.+.+.|.......+.|+......|..+ .+.+ -++.+|++|.
T Consensus 286 ~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~e~P~i~~--~~~~~Le~GM 363 (406)
T PRK14575 286 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEESPFVST--HATESFTSGM 363 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCcccCCCCCccCCCCCC--CCCCCcCCCC
Confidence 45677888899999999999999999999999999999988643221111111111122222 1111 2457899999
Q ss_pred EEEEEeecccCc-EEeceeeeEEccC
Q 021989 209 IINIDVTVYLNG-YHGDTSKTFLCGN 233 (304)
Q Consensus 209 iv~iD~~~~~~G-Y~~D~sRT~~vG~ 233 (304)
++.++-+.+..| +-.-+..|++|.+
T Consensus 364 v~tiEpgiy~~g~gGvriEDtvlVT~ 389 (406)
T PRK14575 364 VLSLETPYYGYNLGSIMIEDMILINK 389 (406)
T ss_pred EEEECCeeecCCCcEEEEEeEEEEcC
Confidence 999998877544 3456889999853
No 47
>PRK14576 putative endopeptidase; Provisional
Probab=96.69 E-value=0.02 Score=55.90 Aligned_cols=103 Identities=13% Similarity=0.082 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCC-CCCCCCCCC
Q 021989 130 AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIP-DSRQLQDGD 208 (304)
Q Consensus 130 e~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p-~~r~l~~GD 208 (304)
+..+++.+++.++.+++++.+|||++-.||+.++.+.+.+.|.......+.|+.-....|..+. +...+ ++.+|++|.
T Consensus 284 ~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHgiG~~l~~~e~-P~i~~~~~~~Le~GM 362 (405)
T PRK14576 284 KLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHYNRGHLGHGDGVFLGLEEV-PFVSTQATETFCPGM 362 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCCCCCCCCcCcC-CCcCCCCCCccCCCC
Confidence 3467788888999999999999999999999999999999986432222222211111233321 22222 467899999
Q ss_pred EEEEEeecccCc-EEeceeeeEEccC
Q 021989 209 IINIDVTVYLNG-YHGDTSKTFLCGN 233 (304)
Q Consensus 209 iv~iD~~~~~~G-Y~~D~sRT~~vG~ 233 (304)
++.++.+.+..| .-.-+..|++|.+
T Consensus 363 v~~vEp~~y~~g~ggvriEDtvlVTe 388 (405)
T PRK14576 363 VLSLETPYYGIGVGSIMLEDMILITD 388 (405)
T ss_pred EEEECCceeecCCCEEEEeeEEEECC
Confidence 999997655433 2344788998843
No 48
>PRK08671 methionine aminopeptidase; Provisional
Probab=96.64 E-value=0.037 Score=51.72 Aligned_cols=101 Identities=20% Similarity=0.221 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCee-eecCCCCcccC-CCCCCCCCCCC
Q 021989 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSV-CTSVNECMCHG-IPDSRQLQDGD 208 (304)
Q Consensus 131 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v-~sg~n~~~~H~-~p~~r~l~~GD 208 (304)
..+++.+.+.++++.+.+.++||++..||.+.+.+.+.+.|..+. .+..|+.-.. ..-..-.++.. ..++.+|++|+
T Consensus 102 ~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~-~~~~GHgiG~~~~he~p~ip~~~~~~~~~le~Gm 180 (291)
T PRK08671 102 KYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPI-RNLTGHGLERYELHAGPSIPNYDEGGGVKLEEGD 180 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccc-CCCcccCcCCCcccCCCccCccCCCCCceeCCCC
Confidence 456788888899999999999999999999999999999998663 2222221100 00000011211 12467899999
Q ss_pred EEEEEeecc-cCcEEeceeeeEEcc
Q 021989 209 IINIDVTVY-LNGYHGDTSKTFLCG 232 (304)
Q Consensus 209 iv~iD~~~~-~~GY~~D~sRT~~vG 232 (304)
++.|+.... -.|+..|..+|-+..
T Consensus 181 V~aIEp~~t~G~G~v~~~~~~~iy~ 205 (291)
T PRK08671 181 VYAIEPFATDGEGKVVEGPEVEIYS 205 (291)
T ss_pred EEEEcceEECCCCeEecCCceEEEe
Confidence 999998764 478888888887764
No 49
>PRK12896 methionine aminopeptidase; Reviewed
Probab=96.62 E-value=0.029 Score=50.89 Aligned_cols=101 Identities=16% Similarity=0.163 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCC-CcccC-CC-CCCCCCCCC
Q 021989 132 MRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNE-CMCHG-IP-DSRQLQDGD 208 (304)
Q Consensus 132 mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~-~~~H~-~p-~~r~l~~GD 208 (304)
.+++.+.+.++++++.+.++||++-.||...+.+.+.+.|.... .++.|+.-.+...... .+.++ .+ ++.+|++|.
T Consensus 125 ~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G~~~~-~~~~GHgiG~~~he~p~~~~~~~~~~~~~~le~Gm 203 (255)
T PRK12896 125 AEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGYSVV-RDLTGHGVGRSLHEEPSVILTYTDPLPNRLLRPGM 203 (255)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-cCcccCCcCcccccCCCccccCCCCCCCCEecCCc
Confidence 56677888889999999999999999999999999999986431 2222222111111110 11111 13 367899999
Q ss_pred EEEEEeecc------------------cCcEEeceeeeEEccC
Q 021989 209 IINIDVTVY------------------LNGYHGDTSKTFLCGN 233 (304)
Q Consensus 209 iv~iD~~~~------------------~~GY~~D~sRT~~vG~ 233 (304)
++.|+-+.+ .+.+..-+..|++|.+
T Consensus 204 V~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~vt~ 246 (255)
T PRK12896 204 TLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVVTR 246 (255)
T ss_pred EEEEeceEEcCCCceEEcCCCCEEEecCCCeEEEEEEEEEEcC
Confidence 999997664 2455666889998854
No 50
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.56 E-value=0.038 Score=51.57 Aligned_cols=97 Identities=24% Similarity=0.257 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCC-----CCcccC-CCCCCCC
Q 021989 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVN-----ECMCHG-IPDSRQL 204 (304)
Q Consensus 131 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n-----~~~~H~-~p~~r~l 204 (304)
..++..+.+.++++++.+.++||++-.||.+++.+.+.+.|..|. .++.|+. .|.+ -.++.. ..++.+|
T Consensus 101 ~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~~~-~~~~GHg----ig~~~~h~~~~ip~~~~~~~~~l 175 (291)
T cd01088 101 KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPI-RNLTGHS----IERYRLHAGKSIPNVKGGEGTRL 175 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCEEe-ecCCccC----ccCccccCCCccCccCCCCCCEe
Confidence 556788899999999999999999999999999999999998763 2222221 1211 011111 1246789
Q ss_pred CCCCEEEEEeecc-cCcEEeceeeeEEcc
Q 021989 205 QDGDIINIDVTVY-LNGYHGDTSKTFLCG 232 (304)
Q Consensus 205 ~~GDiv~iD~~~~-~~GY~~D~sRT~~vG 232 (304)
++|+++.||.... -.|+..+-.+|-+..
T Consensus 176 e~gmV~aIEp~~s~G~G~v~~~~~~~iy~ 204 (291)
T cd01088 176 EEGDVYAIEPFATTGKGYVHDGPECSIYM 204 (291)
T ss_pred CCCCEEEEceeEECCCCeeecCCceEEEE
Confidence 9999999998764 467877777776664
No 51
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=96.56 E-value=0.027 Score=51.28 Aligned_cols=100 Identities=15% Similarity=0.185 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCe----eeecCCCCcccCCC-CCCCC
Q 021989 130 AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKS----VCTSVNECMCHGIP-DSRQL 204 (304)
Q Consensus 130 e~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~----v~sg~n~~~~H~~p-~~r~l 204 (304)
+..|++.+++.++.+++.+.++||++-.||...+.+.+.+.+..-. . .|+.. |-....+....-.+ ++++|
T Consensus 119 ~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~~~~~--~--~~~~~~GHgiGle~hE~~~~l~~~~~~~L 194 (243)
T cd01091 119 SEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKKPELE--P--NFTKNLGFGIGLEFRESSLIINAKNDRKL 194 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhChhHH--H--hCcCCcccccCcccccCccccCCCCCCCc
Confidence 4567788999999999999999999999999999999988752111 0 12211 11222221111112 46889
Q ss_pred CCCCEEEEEeecc-c----------CcEEeceeeeEEccC
Q 021989 205 QDGDIINIDVTVY-L----------NGYHGDTSKTFLCGN 233 (304)
Q Consensus 205 ~~GDiv~iD~~~~-~----------~GY~~D~sRT~~vG~ 233 (304)
++|.++.+..+.+ . +.|-.-++.|++|.+
T Consensus 195 ~~GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt~ 234 (243)
T cd01091 195 KKGMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVTE 234 (243)
T ss_pred CCCCEEEEeCCcccccCccccCccCCeeEEEEEEEEEEcC
Confidence 9999999999986 3 257888999999954
No 52
>PRK12318 methionine aminopeptidase; Provisional
Probab=96.55 E-value=0.026 Score=52.72 Aligned_cols=86 Identities=19% Similarity=0.252 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCC--CcccCCC-CCCCCCCC
Q 021989 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNE--CMCHGIP-DSRQLQDG 207 (304)
Q Consensus 131 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~--~~~H~~p-~~r~l~~G 207 (304)
..|++..++.++++.+.+.++||++..||+.++.+.+.+.|.... ..+.|+. |-....+ .+.+..+ ++.+|++|
T Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~~~-~~~~GHg--IGl~~hE~P~i~~~~~~~~~~L~~G 235 (291)
T PRK12318 159 IKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFSVV-DQFVGHG--VGIKFHENPYVPHHRNSSKIPLAPG 235 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccC-CCcccCC--cCccccCCCcccCcCCCCCCEeCCC
Confidence 457788899999999999999999999999999999999986532 1222222 1122222 1222222 34689999
Q ss_pred CEEEEEeecccC
Q 021989 208 DIINIDVTVYLN 219 (304)
Q Consensus 208 Div~iD~~~~~~ 219 (304)
.++.|+-+.+..
T Consensus 236 MV~~iEP~i~~~ 247 (291)
T PRK12318 236 MIFTIEPMINVG 247 (291)
T ss_pred CEEEECCEEEcC
Confidence 999999776643
No 53
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=96.50 E-value=0.039 Score=49.59 Aligned_cols=100 Identities=13% Similarity=0.130 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccC-----C-CCCCCC
Q 021989 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHG-----I-PDSRQL 204 (304)
Q Consensus 131 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~-----~-p~~r~l 204 (304)
..|++.+++.++++++.+.++||++-.||++++.+.+.+.|...... +++...+-....+. +|. . .++.+|
T Consensus 110 ~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~--~~~GHgiGl~~he~-~~~~g~~~~~~~~~~L 186 (228)
T cd01090 110 AHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRT--FGYGHSFGVLSHYY-GREAGLELREDIDTVL 186 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccc--cccCcccccccccC-CCccccccCCCCCCcc
Confidence 36788889999999999999999999999999999999998654211 11111221112221 111 1 135889
Q ss_pred CCCCEEEEEeecccC----c-EEeceeeeEEccC
Q 021989 205 QDGDIINIDVTVYLN----G-YHGDTSKTFLCGN 233 (304)
Q Consensus 205 ~~GDiv~iD~~~~~~----G-Y~~D~sRT~~vG~ 233 (304)
++|.++.++-+.+.. | .-.-+..|++|.+
T Consensus 187 e~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~ 220 (228)
T cd01090 187 EPGMVVSMEPMIMLPEGQPGAGGYREHDILVINE 220 (228)
T ss_pred CCCCEEEECCEEeecccCCCCcEEEeeeEEEECC
Confidence 999999999887652 2 2333788988854
No 54
>PRK07281 methionine aminopeptidase; Reviewed
Probab=96.46 E-value=0.027 Score=52.59 Aligned_cols=85 Identities=9% Similarity=0.112 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCC--CcccC-CC-CCCCCCC
Q 021989 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNE--CMCHG-IP-DSRQLQD 206 (304)
Q Consensus 131 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~--~~~H~-~p-~~r~l~~ 206 (304)
..|++.+++.++++++.+.++||++-.||+.++.+.+.+.|... ...+.|+.-. ....+ .++++ .+ .+.+|++
T Consensus 149 ~~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~-~~~~~GHGIG--l~~hE~P~i~~~~~~~~~~~Le~ 225 (286)
T PRK07281 149 EVKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRGYGV-VRDLVGHGVG--PTMHEEPMVPNYGTAGRGLRLRE 225 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-CCCeeeeeCC--CccCCCCcCCCcccCCCCCEECC
Confidence 35788999999999999999999999999999999999887643 2222222111 11111 12222 12 3568999
Q ss_pred CCEEEEEeeccc
Q 021989 207 GDIINIDVTVYL 218 (304)
Q Consensus 207 GDiv~iD~~~~~ 218 (304)
|.++.|.-+.+.
T Consensus 226 GMV~tiEPgiy~ 237 (286)
T PRK07281 226 GMVLTIEPMINT 237 (286)
T ss_pred CCEEEECCeeEc
Confidence 999999988764
No 55
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=96.43 E-value=0.028 Score=54.66 Aligned_cols=99 Identities=15% Similarity=0.221 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCC----cccCCC-CCCCCC
Q 021989 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNEC----MCHGIP-DSRQLQ 205 (304)
Q Consensus 131 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~----~~H~~p-~~r~l~ 205 (304)
.+|++.+++.++.+++++.++||+|-.||++++.+.+.+.|.... ...|++-.+ +.... .+.-.+ ++.+|+
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~~--h~~GhgiGl--~~~~~~~e~~~~l~~~~~~~L~ 346 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHKD--SRTGYPIGL--SYPPDWGERTMSLRPGDNTVLK 346 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccC--CCceeeecc--CcCCCCCCccccccCCCCceec
Confidence 466788899999999999999999999999999999999886531 122332111 11100 011122 357899
Q ss_pred CCCEEEEEeecccCcEEeceeeeEEccC
Q 021989 206 DGDIINIDVTVYLNGYHGDTSKTFLCGN 233 (304)
Q Consensus 206 ~GDiv~iD~~~~~~GY~~D~sRT~~vG~ 233 (304)
+|.++.++-+.+..|+..-+.-|++|.+
T Consensus 347 ~GMv~tvEpgiy~~~~Gvried~v~VT~ 374 (391)
T TIGR02993 347 PGMTFHFMTGLWMEDWGLEITESILITE 374 (391)
T ss_pred CCCEEEEcceeEeCCCCeEEeeEEEECC
Confidence 9999999999987777667888999853
No 56
>PRK09795 aminopeptidase; Provisional
Probab=96.28 E-value=0.063 Score=51.47 Aligned_cols=104 Identities=23% Similarity=0.259 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCC-CCCCC
Q 021989 126 SESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIP-DSRQL 204 (304)
Q Consensus 126 ~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p-~~r~l 204 (304)
+++-+.++++.+++.++.+++.+.++||++-.||++++.+.+.+.|.........|+ .|-....+ .+.-.+ ++.+|
T Consensus 236 ~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~~~~~h~~GH--giGl~~he-~p~i~~~~~~~l 312 (361)
T PRK09795 236 SAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFGHNTGH--AIGIEVHE-DPRFSPRDTTTL 312 (361)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCccCCCCCCc--cCCccccC-CCCcCCCCCCCc
Confidence 445456888999999999999999999999999999999999998864321111111 11111111 111122 46889
Q ss_pred CCCCEEEEEeecccCcE-EeceeeeEEcc
Q 021989 205 QDGDIINIDVTVYLNGY-HGDTSKTFLCG 232 (304)
Q Consensus 205 ~~GDiv~iD~~~~~~GY-~~D~sRT~~vG 232 (304)
++|.++.|+-+.+..|. -.-+.-|++|.
T Consensus 313 ~~gmv~~iEpgiy~~~~~gvriEd~v~vt 341 (361)
T PRK09795 313 QPGMLLTVEPGIYLPGQGGVRIEDVVLVT 341 (361)
T ss_pred CCCCEEEECCEEEeCCCCEEEEeeEEEEC
Confidence 99999999998876543 35567888884
No 57
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=96.18 E-value=0.053 Score=48.58 Aligned_cols=98 Identities=20% Similarity=0.258 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCC--CCCCCeeeecCCCCcccCCCCCCCCCCC
Q 021989 130 AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGY--GGFPKSVCTSVNECMCHGIPDSRQLQDG 207 (304)
Q Consensus 130 e~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y--~gfp~~v~sg~n~~~~H~~p~~r~l~~G 207 (304)
...+++.+.+.++++++.+.++||++-.||+.++.+.+.+.|..+.. +| +++...+.++.+... -...|++|
T Consensus 120 ~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~G~~~~~-~~~~h~~g~~~~~~~~~~~-----~~~~l~~g 193 (228)
T cd01089 120 GKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDYGCTPVE-GVLSHQLKRVVSSGEGKAK-----LVECVKHG 193 (228)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCEEec-CccccCcCceEecCCCCcc-----chhhccCC
Confidence 46778888999999999999999999999999999999999953211 01 111122222221110 15679999
Q ss_pred CEEEEEeecccCc-EEeceeeeEEccC
Q 021989 208 DIINIDVTVYLNG-YHGDTSKTFLCGN 233 (304)
Q Consensus 208 Div~iD~~~~~~G-Y~~D~sRT~~vG~ 233 (304)
.++.++......| +..-+.-|+++.+
T Consensus 194 mvf~~ep~~~~~g~~~~~~~~Tv~vt~ 220 (228)
T cd01089 194 LLFPYPVLYEKEGEVVAQFKLTVLLTP 220 (228)
T ss_pred cccccceeEccCCCeEEEEEEEEEEcC
Confidence 9999999988655 7889999999954
No 58
>PLN03158 methionine aminopeptidase; Provisional
Probab=96.17 E-value=0.058 Score=52.64 Aligned_cols=85 Identities=15% Similarity=0.207 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCC--CCCCCCCCE
Q 021989 132 MRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPD--SRQLQDGDI 209 (304)
Q Consensus 132 mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~--~r~l~~GDi 209 (304)
.|++.+.+.++++++.+.++||++-.||..++.+.+.+.|... ...|.|+.-....-..-.++|+..+ ..+|++|.+
T Consensus 252 ~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~~~~~~~G~~~-v~~~~GHGIG~~~He~P~i~~~~~~~~~~~l~~GMV 330 (396)
T PLN03158 252 SRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGLSV-VKSYCGHGIGELFHCAPNIPHYARNKAVGVMKAGQV 330 (396)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCCCc-cCCccCCccccccCCCCCCCcccCCCCCCEecCCcE
Confidence 4677888899999999999999999999999999999988643 1222222111111111134554322 368999999
Q ss_pred EEEEeecc
Q 021989 210 INIDVTVY 217 (304)
Q Consensus 210 v~iD~~~~ 217 (304)
+.|+-+.+
T Consensus 331 fTIEP~i~ 338 (396)
T PLN03158 331 FTIEPMIN 338 (396)
T ss_pred EEECCeec
Confidence 99997765
No 59
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=95.91 E-value=0.091 Score=47.33 Aligned_cols=102 Identities=18% Similarity=0.195 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcC----CCCC----------CCCC--CCCCCeeeecCCCCc
Q 021989 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAG----AYPS----------PLGY--GGFPKSVCTSVNECM 194 (304)
Q Consensus 131 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G----~~ps----------~l~y--~gfp~~v~sg~n~~~ 194 (304)
..++..+.+.++++.+.+.++||++-.||.+++.+.+.+.+ ..+. ...| +++-..+-....+ .
T Consensus 104 ~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e-~ 182 (243)
T cd01087 104 EQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHYLGLDVHD-V 182 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCCCCccccCccccc-C
Confidence 45677888899999999999999999999999999887653 2110 0011 1111111111121 1
Q ss_pred ccC--CC-CCCCCCCCCEEEEEeecccCc-----------EEeceeeeEEccC
Q 021989 195 CHG--IP-DSRQLQDGDIINIDVTVYLNG-----------YHGDTSKTFLCGN 233 (304)
Q Consensus 195 ~H~--~p-~~r~l~~GDiv~iD~~~~~~G-----------Y~~D~sRT~~vG~ 233 (304)
+.. .+ ++.+|++|.++.+.-+.+..+ +-.-+..|++|.+
T Consensus 183 p~~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~Vt~ 235 (243)
T cd01087 183 GGYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLVTE 235 (243)
T ss_pred ccccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEEcC
Confidence 211 22 468899999999999887553 6677888998843
No 60
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=95.91 E-value=0.038 Score=48.30 Aligned_cols=95 Identities=27% Similarity=0.327 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCC-CCCCCCCCCCCCeeeecCCC--CcccC--CCCCCCCCC
Q 021989 132 MRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGA-YPSPLGYGGFPKSVCTSVNE--CMCHG--IPDSRQLQD 206 (304)
Q Consensus 132 mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~-~ps~l~y~gfp~~v~sg~n~--~~~H~--~p~~r~l~~ 206 (304)
.|++.+.+.++++.+++.++||+|-.||.+++.+.+.+.|. .+.+.. +. -..|... ..+.- .-++.+|++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~~~---~G--H~iG~~~~~~~P~i~~~~~~~~l~~ 178 (207)
T PF00557_consen 104 QRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGLEEPYPHG---LG--HGIGLEFHEPGPNIARPGDDTVLEP 178 (207)
T ss_dssp HHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTEGEEBTSS---SE--EEESSSSSEEEEEESSTTTSSB--T
T ss_pred ccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhcccceeeec---cc--ccccccccccceeeecccccceecC
Confidence 78888888999999999999999999999999999999986 221111 11 1233211 11221 125789999
Q ss_pred CCEEEEEeecc-cCcE-EeceeeeEEc
Q 021989 207 GDIINIDVTVY-LNGY-HGDTSKTFLC 231 (304)
Q Consensus 207 GDiv~iD~~~~-~~GY-~~D~sRT~~v 231 (304)
|.++.++.+.. ..|. -.-+..|++|
T Consensus 179 gmv~~iep~~~~~~~~~g~~~ed~v~V 205 (207)
T PF00557_consen 179 GMVFAIEPGLYFIPGWGGVRFEDTVLV 205 (207)
T ss_dssp TBEEEEEEEEEEETTSEEEEEBEEEEE
T ss_pred CCceeEeeeEEccCCCcEEEEEEEEEE
Confidence 99999999765 3232 5666666665
No 61
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=95.84 E-value=0.076 Score=49.73 Aligned_cols=98 Identities=22% Similarity=0.282 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCe--eeecCCCCcccCC-CCCCCCCCCC
Q 021989 132 MRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKS--VCTSVNECMCHGI-PDSRQLQDGD 208 (304)
Q Consensus 132 mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~--v~sg~n~~~~H~~-p~~r~l~~GD 208 (304)
.++..+.+.++++++.+.++||++-.||++++.+.+.+.|..+. .++.|+.-. ..-+ .-.++... .++.+|++|+
T Consensus 106 ~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i-~~~~GHgig~~~~h~-g~~ip~i~~~~~~~le~Gm 183 (295)
T TIGR00501 106 YDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPI-SNLTGHSMAPYRLHG-GKSIPNVKERDTTKLEEGD 183 (295)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeee-cCCCCcceecccccC-CCccCeecCCCCCEeCCCC
Confidence 47788888999999999999999999999999999999998763 333333210 0000 00112211 2457899999
Q ss_pred EEEEEeecc-cCcEEeceeeeEEc
Q 021989 209 IINIDVTVY-LNGYHGDTSKTFLC 231 (304)
Q Consensus 209 iv~iD~~~~-~~GY~~D~sRT~~v 231 (304)
++.|+.... -.|+..|..+|-+.
T Consensus 184 V~aIEP~~~~G~G~v~~~~~~~iy 207 (295)
T TIGR00501 184 VVAIEPFATDGVGYVTDGGEVSIY 207 (295)
T ss_pred EEEEceeEECCcCeEecCCCeEEE
Confidence 999998654 46888777766554
No 62
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=95.41 E-value=0.14 Score=49.95 Aligned_cols=100 Identities=18% Similarity=0.298 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCC--CCCCCeeeecCCCCcccCCC------CCC
Q 021989 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGY--GGFPKSVCTSVNECMCHGIP------DSR 202 (304)
Q Consensus 131 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y--~gfp~~v~sg~n~~~~H~~p------~~r 202 (304)
..+++...+..+++.+.+.++||++-.||..++.+.+.+.|..+.. ++ +++...+--|....++++.+ ++.
T Consensus 139 ~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ai~~v~~~~G~~~v~-~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~ 217 (389)
T TIGR00495 139 RKADVIAAAHLAAEAALRLVKPGNTNTQVTEAINKVAHSYGCTPVE-GMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTA 217 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCeecC-CceeecccceeccCCCeeeecCCccccCCCCCC
Confidence 4566778888999999999999999999999999999999976532 22 12222221122222344322 245
Q ss_pred CCCCCCEEEEEeecc-cCcEEecee-eeEEc
Q 021989 203 QLQDGDIINIDVTVY-LNGYHGDTS-KTFLC 231 (304)
Q Consensus 203 ~l~~GDiv~iD~~~~-~~GY~~D~s-RT~~v 231 (304)
.+++|+++.||..+. -.|+.-+.. ||-+.
T Consensus 218 ~le~gev~aIEp~vs~G~g~v~~~~~~~tiy 248 (389)
T TIGR00495 218 EFEENEVYAVDILVSTGEGKAKDADQRTTIY 248 (389)
T ss_pred EecCCCEEEEeeeecCCCceEEECCCeeEEE
Confidence 799999999999875 455555554 44443
No 63
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=95.20 E-value=0.14 Score=46.95 Aligned_cols=88 Identities=14% Similarity=0.126 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCC-C-CCCCCCC
Q 021989 130 AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIP-D-SRQLQDG 207 (304)
Q Consensus 130 e~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p-~-~r~l~~G 207 (304)
+..++.++.+.++|..+.+.++||.+..||.+++.+.+..+|..+- -+|.|..-.-..=..-.++|+.. . ..+|++|
T Consensus 120 ~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~~~G~~vV-r~~~GHgig~~~He~p~ip~y~~~~~~~~l~~G 198 (255)
T COG0024 120 EDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAESRGFSVV-RNLTGHGIGRELHEEPSIPNYGKDGTGVRLKEG 198 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCEEe-ecccCCccCcccCCCCeeccccCCCCCcccCCC
Confidence 4567788999999999999999999999999999999999886542 23333211111222235566432 2 2589999
Q ss_pred CEEEEEeeccc
Q 021989 208 DIINIDVTVYL 218 (304)
Q Consensus 208 Div~iD~~~~~ 218 (304)
+++.|+--+.-
T Consensus 199 mv~aIEPmi~~ 209 (255)
T COG0024 199 MVFAIEPMINT 209 (255)
T ss_pred CEEEEeeEEEc
Confidence 99999866543
No 64
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=95.07 E-value=0.28 Score=47.40 Aligned_cols=97 Identities=26% Similarity=0.272 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCC------CCCCCC
Q 021989 132 MRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIP------DSRQLQ 205 (304)
Q Consensus 132 mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p------~~r~l~ 205 (304)
.|+...++.++.+++.++++||+|-.||+++..+.+.+.|...... +++.-. .| ...-.|-.| .+.+|+
T Consensus 264 ~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~~~--h~~GHg--vG-~~l~vhE~p~~~~~~~~~~L~ 338 (384)
T COG0006 264 QREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLYFL--HGTGHG--VG-FVLDVHEHPQYLSPGSDTTLE 338 (384)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCccccc--CCcccc--CC-CCcccCcCccccCCCCCcccc
Confidence 3577889999999999999999999999999999999976433211 111111 11 001122222 468899
Q ss_pred CCCEEEEEeecc-cCcEEeceeeeEEccC
Q 021989 206 DGDIINIDVTVY-LNGYHGDTSKTFLCGN 233 (304)
Q Consensus 206 ~GDiv~iD~~~~-~~GY~~D~sRT~~vG~ 233 (304)
+|-++.++-+.+ .+.+-.-+..+++|.+
T Consensus 339 ~GMv~t~Epg~y~~g~~GirIEd~vlVte 367 (384)
T COG0006 339 PGMVFSIEPGIYIPGGGGVRIEDTVLVTE 367 (384)
T ss_pred CCcEEEeccccccCCCceEEEEEEEEEcC
Confidence 999999999977 4668889999999965
No 65
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=94.31 E-value=0.4 Score=47.75 Aligned_cols=95 Identities=16% Similarity=0.248 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCC----C----CCCCCCCCCCeeeecCCCCcccC---CC
Q 021989 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAY----P----SPLGYGGFPKSVCTSVNECMCHG---IP 199 (304)
Q Consensus 131 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~----p----s~l~y~gfp~~v~sg~n~~~~H~---~p 199 (304)
..+...+++.+|++++.+.++||++-.||++++.+.+.+.|.. . ...+..|+ .+|. ...|. +|
T Consensus 264 ~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevies~G~e~~Gk~f~~k~I~nltGH----gIG~--y~iHe~k~iP 337 (470)
T PTZ00053 264 KYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIESYEVEIKGKTYPIKSIRNLNGH----SIGP--YIIHGGKSVP 337 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCcccccccccCCccc----CCCC--ccccCCCcCC
Confidence 4677888899999999999999999999999999999999853 0 00111111 0111 12332 22
Q ss_pred -----CCCCCCCCCEEEEEeecc-cCcEEeceeeeEEc
Q 021989 200 -----DSRQLQDGDIINIDVTVY-LNGYHGDTSKTFLC 231 (304)
Q Consensus 200 -----~~r~l~~GDiv~iD~~~~-~~GY~~D~sRT~~v 231 (304)
+..+|++|+++.|+..+. -.||..|-.+|-+.
T Consensus 338 ~v~~~~~~~LeeGmVfaIEPf~stG~G~v~~~~~~siY 375 (470)
T PTZ00053 338 IVKGGENTRMEEGELFAIETFASTGRGYVNEDLECSHY 375 (470)
T ss_pred eeCCCCCCEecCCCEEEEcceeeCCCCeEecCCCceee
Confidence 356899999999998765 58888886666555
No 66
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=93.65 E-value=0.2 Score=46.78 Aligned_cols=43 Identities=14% Similarity=0.346 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCC
Q 021989 237 GLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFG 279 (304)
Q Consensus 237 e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~ 279 (304)
.++++.+.++++++.|-..+|||+|-.||+++++++.-+.|.-
T Consensus 124 ~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~Y 166 (369)
T KOG2738|consen 124 GMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAY 166 (369)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCc
Confidence 4678888899999999999999999999999999999887653
No 67
>PRK10879 proline aminopeptidase P II; Provisional
Probab=93.03 E-value=1.1 Score=44.18 Aligned_cols=101 Identities=15% Similarity=0.230 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHH----HcCCCCCC-------CCCC-CCCCee--eecCCC-Cccc
Q 021989 132 MRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMII----EAGAYPSP-------LGYG-GFPKSV--CTSVNE-CMCH 196 (304)
Q Consensus 132 mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~----~~G~~ps~-------l~y~-gfp~~v--~sg~n~-~~~H 196 (304)
.|++.+++.++.+++.+.++||++-.+|..++.+.+. +.|.-+.. .+|. .|+..+ ..|.+- -.++
T Consensus 284 q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~ 363 (438)
T PRK10879 284 QREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGV 363 (438)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCC
Confidence 4677788888999999999999999999988876543 33432210 0000 022221 112110 1112
Q ss_pred CCC-CCCCCCCCCEEEEEeeccc----------CcEEeceeeeEEcc
Q 021989 197 GIP-DSRQLQDGDIINIDVTVYL----------NGYHGDTSKTFLCG 232 (304)
Q Consensus 197 ~~p-~~r~l~~GDiv~iD~~~~~----------~GY~~D~sRT~~vG 232 (304)
..+ ++++|++|.++.|+-+.+. .|+..-+..|++|.
T Consensus 364 ~~~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT 410 (438)
T PRK10879 364 YGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVIT 410 (438)
T ss_pred cCCCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEEC
Confidence 212 3579999999999998874 25667788999885
No 68
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=91.13 E-value=4.4 Score=36.24 Aligned_cols=98 Identities=17% Similarity=0.130 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHHhc-CCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCC--cccCCCCCCCCCCCCE
Q 021989 133 RAACELAARVLDAAGKLV-RPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNEC--MCHGIPDSRQLQDGDI 209 (304)
Q Consensus 133 R~A~~ia~~~l~~~~~~i-~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~--~~H~~p~~r~l~~GDi 209 (304)
|++..++.++.+++.+.+ +||++-.+|++.+.+.+.+.|.+-. ...|+.--......+. +.+...++++|++|.+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~~~--h~~GHgIG~~l~~hE~P~i~~~~~~~~~L~~Gmv 191 (224)
T cd01085 114 KRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDYG--HGTGHGVGSFLNVHEGPQSISPAPNNVPLKAGMI 191 (224)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCCCC--CCCCCCCCCCCcCCCCCCcCCcCCCCCCcCCCCE
Confidence 344455556666666666 5999999999999999988885310 0011111100111221 1101124578999999
Q ss_pred EEEEeecccC-cEEeceeeeEEcc
Q 021989 210 INIDVTVYLN-GYHGDTSKTFLCG 232 (304)
Q Consensus 210 v~iD~~~~~~-GY~~D~sRT~~vG 232 (304)
+.|+-+.+.. .+..-+..|++|.
T Consensus 192 ftiEP~iy~~g~~gvried~v~Vt 215 (224)
T cd01085 192 LSNEPGYYKEGKYGIRIENLVLVV 215 (224)
T ss_pred EEECCEeEeCCCeEEEeeEEEEEe
Confidence 9999998854 4556788899884
No 69
>PRK13607 proline dipeptidase; Provisional
Probab=86.04 E-value=7.9 Score=38.42 Aligned_cols=35 Identities=20% Similarity=0.154 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH
Q 021989 133 RAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMI 167 (304)
Q Consensus 133 R~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~ 167 (304)
++..+++.++.+++.+.++||++-.||..+.++.+
T Consensus 271 ~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i 305 (443)
T PRK13607 271 AALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRI 305 (443)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHH
Confidence 46788899999999999999999999998887655
No 70
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=71.97 E-value=16 Score=38.45 Aligned_cols=100 Identities=21% Similarity=0.291 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecC----CC-CcccCCCCCCCCCC
Q 021989 132 MRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSV----NE-CMCHGIPDSRQLQD 206 (304)
Q Consensus 132 mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~----n~-~~~H~~p~~r~l~~ 206 (304)
|.++...--.+.+++..+++||.+-.+|...+...+.+.+-+-.+ .|.+.+.+|. ++ ...-..-++++|+.
T Consensus 259 mq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~Pel~~----~~~k~lG~~iGlEFREssl~inaKnd~~lk~ 334 (960)
T KOG1189|consen 259 MQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKPELVP----NFTKNLGFGIGLEFRESSLVINAKNDRVLKK 334 (960)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCcchhh----hhhhhcccccceeeecccccccccchhhhcc
Confidence 556777777888888999999999999999999999988643211 1333322211 11 11112235799999
Q ss_pred CCEEEEEeecc-------cCcEEeceeeeEEccCCC
Q 021989 207 GDIINIDVTVY-------LNGYHGDTSKTFLCGNVS 235 (304)
Q Consensus 207 GDiv~iD~~~~-------~~GY~~D~sRT~~vG~~~ 235 (304)
|++.+|.+|.. .+-|.--++-|+.+|+-+
T Consensus 335 gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv~e~~ 370 (960)
T KOG1189|consen 335 GMVFNISLGFSNLTNPESKNSYALLLSDTVLVGEDP 370 (960)
T ss_pred CcEEEEeeccccccCcccccchhhhccceeeecCCC
Confidence 99999999852 355888899999998633
No 71
>cd01666 TGS_DRG_C TGS_DRG_C: DRG (developmentally regulated GTP-binding protein) represents a family of GTP-binding proteins that includes two members, DRG1 and DRG2. DRG1 and DRG2 have a C-terminal TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) with a predominantly beta-sheet structure. The function of TGS is unknown but its presence in two types of regulatory proteins (the DRG GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=59.94 E-value=33 Score=25.35 Aligned_cols=52 Identities=15% Similarity=0.275 Sum_probs=33.6
Q ss_pred cCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCC-CcccCCCCCCCCCCCCEEEE
Q 021989 150 VRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNE-CMCHGIPDSRQLQDGDIINI 212 (304)
Q Consensus 150 i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~-~~~H~~p~~r~l~~GDiv~i 212 (304)
++.|-|-.++...+|..+.+.=.+ .+..|... ....-.+-+.+|++||+|.|
T Consensus 21 L~~GaTV~D~a~~iH~di~~~f~~-----------A~v~g~s~~~~gq~Vgl~~~L~d~DvVeI 73 (75)
T cd01666 21 LRRGSTVEDVCNKIHKDLVKQFKY-----------ALVWGSSVKHSPQRVGLDHVLEDEDVVQI 73 (75)
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCe-----------eEEeccCCcCCCeECCCCCEecCCCEEEE
Confidence 567889999999999777653221 22222221 12233467899999999986
No 72
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=52.58 E-value=29 Score=21.57 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHH
Q 021989 135 ACELAARVLDAAGKLVRPSVTTNEIDKAVHQMII 168 (304)
Q Consensus 135 A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~ 168 (304)
.|.++..++..+.+.++...|+.+|...+++.+.
T Consensus 3 ~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~ 36 (39)
T PF05184_consen 3 ECDICKFVVKEIEKLLKNNKTEEEIKKALEKACN 36 (39)
T ss_dssp HHHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHh
Confidence 4788899999999999999999999999988763
No 73
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=50.86 E-value=22 Score=26.62 Aligned_cols=51 Identities=29% Similarity=0.298 Sum_probs=37.7
Q ss_pred CCCCCCCCEEEEEeeccc-CcEEecee------eeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCC
Q 021989 201 SRQLQDGDIINIDVTVYL-NGYHGDTS------KTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGA 260 (304)
Q Consensus 201 ~r~l~~GDiv~iD~~~~~-~GY~~D~s------RT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~ 260 (304)
++..++||.|.|++.++. +|-.-|-+ .+|.+|.- ....+++.++..+++|-
T Consensus 2 ~~~~~~gd~V~i~y~~~~~~g~~~~~~~~~~~~~~~~~g~~---------~~i~g~e~al~~m~~Ge 59 (94)
T PF00254_consen 2 PRTPKEGDTVTIHYTGRLEDGKVFDSSYQEGEPFEFRLGSG---------QVIPGLEEALIGMKVGE 59 (94)
T ss_dssp SSSBSTTSEEEEEEEEEETTSEEEEETTTTTSEEEEETTSS---------SSSHHHHHHHTTSBTTE
T ss_pred CccCCCCCEEEEEEEEEECCCcEEEEeeecCcceeeeeccC---------ccccchhhhcccccCCC
Confidence 466899999999999875 88777777 67777741 13346677788888874
No 74
>TIGR00115 tig trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.
Probab=47.30 E-value=53 Score=31.88 Aligned_cols=58 Identities=17% Similarity=0.339 Sum_probs=41.9
Q ss_pred CCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCEEEEEeecccCcEEecee----ee
Q 021989 153 SVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTS----KT 228 (304)
Q Consensus 153 GvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~~r~l~~GDiv~iD~~~~~~GY~~D~s----RT 228 (304)
-+|+.+|+..+.....+++.+-. .++++++.||.|.+|+....+|=..+-+ .+
T Consensus 119 ~vtde~vd~~i~~l~~~~a~~~~-----------------------~~~~~~~~gD~V~v~~~~~~dg~~~~~~~~~~~~ 175 (408)
T TIGR00115 119 EVTDEDVDEELEKLREQNATLVP-----------------------VERRAAEKGDRVTIDFEGFIDGEAFEGGKAENFS 175 (408)
T ss_pred CCCHHHHHHHHHHHHHhCCcccc-----------------------ccccccCCCCEEEEEEEEEECCEECcCCCCCCeE
Confidence 57999999999999888764310 1235789999999999987676554433 36
Q ss_pred EEccC
Q 021989 229 FLCGN 233 (304)
Q Consensus 229 ~~vG~ 233 (304)
|.+|.
T Consensus 176 ~~lg~ 180 (408)
T TIGR00115 176 LELGS 180 (408)
T ss_pred EEECC
Confidence 67774
No 75
>PRK01490 tig trigger factor; Provisional
Probab=47.29 E-value=60 Score=31.86 Aligned_cols=56 Identities=20% Similarity=0.337 Sum_probs=39.6
Q ss_pred CCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCEEEEEeecccCcEEece----eee
Q 021989 153 SVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDT----SKT 228 (304)
Q Consensus 153 GvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~~r~l~~GDiv~iD~~~~~~GY~~D~----sRT 228 (304)
-+|+.+|+..+......++-+- +.+++++.||.|.+|+....+|-.-+- ..+
T Consensus 131 ~vtde~vd~~i~~l~~~~a~~~------------------------~~~~~~~~gD~V~vd~~~~~~g~~~~~~~~~~~~ 186 (435)
T PRK01490 131 EVTDEDVDEELERLRKQFATLV------------------------PVERPAENGDRVTIDFVGSIDGEEFEGGKAEDFS 186 (435)
T ss_pred CCCHHHHHHHHHHHHHhCCccc------------------------cccccCCCCCEEEEEEEEEECCEECcCCCCCceE
Confidence 4799999999998887765321 234678999999999988776644322 245
Q ss_pred EEcc
Q 021989 229 FLCG 232 (304)
Q Consensus 229 ~~vG 232 (304)
|.+|
T Consensus 187 ~~lg 190 (435)
T PRK01490 187 LELG 190 (435)
T ss_pred EEEc
Confidence 5666
No 76
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=44.14 E-value=81 Score=32.87 Aligned_cols=71 Identities=24% Similarity=0.261 Sum_probs=46.6
Q ss_pred HHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeee--ecCCC---CcccCCCCCCCCCCCCEEEEEee
Q 021989 141 RVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVC--TSVNE---CMCHGIPDSRQLQDGDIINIDVT 215 (304)
Q Consensus 141 ~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~--sg~n~---~~~H~~p~~r~l~~GDiv~iD~~ 215 (304)
..-......++||.+-.+|...+..++...|-+-.+ .|-..|. +|... ..+...-++|+||.|++++|.+|
T Consensus 309 ~lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~p----nF~~nvG~~igiefR~s~~~~nvkn~r~lq~g~~fnis~g 384 (1001)
T COG5406 309 MLQKYILGLVRPGTDSGIIYSEAEKYISSNGPELGP----NFIYNVGLMIGIEFRSSQKPFNVKNGRVLQAGCIFNISLG 384 (1001)
T ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHhcCCccCc----hHhhhhhhhccccccccccceeccCCceeccccEEEEeec
Confidence 334455668999999999999999999998754221 1222221 22111 12233346799999999999985
No 77
>cd04938 TGS_Obg-like TGS_Obg-like: The C-terminal TGS domain of Obg-like GTPases such as those present in DRG (developmentally regulated GTP-binding protein), and GTP-binding proteins Ygr210 and YchF. The TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=39.72 E-value=49 Score=24.45 Aligned_cols=47 Identities=15% Similarity=0.144 Sum_probs=31.2
Q ss_pred cCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCEEEE
Q 021989 150 VRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINI 212 (304)
Q Consensus 150 i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~~r~l~~GDiv~i 212 (304)
++.|.|-.|++..+|..+.+.=.+ .+-.+ ......+..|++||+|.|
T Consensus 28 l~~g~tv~d~a~~IH~d~~~~F~~-----------A~v~~-----~~~vg~d~~l~d~DVv~i 74 (76)
T cd04938 28 VKKGTTVGDVARKIHGDLEKGFIE-----------AVGGR-----RRLEGKDVILGKNDILKF 74 (76)
T ss_pred EcCCCCHHHHHHHHhHHHHhccEE-----------EEEcc-----CEEECCCEEecCCCEEEE
Confidence 566889999999999876653222 11122 222345788999999987
No 78
>PF03477 ATP-cone: ATP cone domain; InterPro: IPR005144 The ATP-cone is an evolutionarily mobile, ATP-binding regulatory domain which is found in a variety of proteins including ribonucleotide reductases, phosphoglycerate kinases and transcriptional regulators []. In ribonucleotide reductase protein R1 (P28903 from SWISSPROT) from Escherichia coli this domain is located at the N terminus, and is composed mostly of helices []. It forms part of the allosteric effector region and contains the general allosteric activity site in a cleft located at the tip of the N-terminal region []. This site binds either ATP (activating) or dATP (inhibitory), with the base bound in a hydrophobic pocket and the phosphates bound to basic residues. Substrate binding to this site is thought to affect enzyme activity by altering the relative positions of the two subunits of ribonucleotide reductase.; PDB: 2XO4_A 1RLR_A 7R1R_B 5R1R_A 2XO5_B 2XAW_A 2R1R_C 2XAY_B 2X0X_C 2XAZ_A ....
Probab=36.32 E-value=25 Score=26.25 Aligned_cols=36 Identities=25% Similarity=0.355 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCC
Q 021989 137 ELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGA 172 (304)
Q Consensus 137 ~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~ 172 (304)
.++..+.....+....++|+.||...+...+.+.|.
T Consensus 39 ~i~~~V~~~l~~~~~~~is~~eI~~~v~~~L~~~~~ 74 (90)
T PF03477_consen 39 EIASEVENKLYDSGKEEISTEEIQDIVENALMEEGF 74 (90)
T ss_dssp HHHHHHHTC-ST----TEEHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHhccCCCeeHHHHHHHHHHHHHcCCh
Confidence 344455444444444499999999999999997764
No 79
>PF02829 3H: 3H domain; InterPro: IPR004173 The 3H domain is named after its three highly conserved histidine residues. The 3H domain appears to be a small molecule-binding domain, based on its occurrence with other domains []. Several proteins carrying this domain are transcriptional regulators from the biotin repressor family. The transcription regulator TM1602 from Thermotoga maritima is a DNA-binding protein thought to belong to a family of de novo NAD synthesis pathway regulators. TM1602 has an N-terminal DNA-binding domain and a C-terminal 3H regulatory domain. The N-terminal domain appears to bind to the NAD promoter region and repress the de novo NAD biosynthesis operon, while the C-terminal 3H domain may bind to nicotinamide, nicotinic acid, or other substrate/products []. The 3H domain has a 2-layer alpha/beta sandwich fold.; GO: 0005488 binding; PDB: 1J5Y_A.
Probab=32.25 E-value=86 Score=24.48 Aligned_cols=69 Identities=17% Similarity=0.165 Sum_probs=50.7
Q ss_pred EEEEEeecccCcEEeceeeeEEccCCCHHHHHHHHHHHHHHHHHHHHccCCC-------cHHHHHHHHHHHHHHcCCC
Q 021989 209 IINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGA-------SFKKIGKRISEHAEKYGFG 279 (304)
Q Consensus 209 iv~iD~~~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~-------~~~dI~~~i~~~~~~~G~~ 279 (304)
-..+|+.+...+|- .+++.+.+- -..+.++.++...+.....+..+--|+ +-.+..+.|.+.+++.||-
T Consensus 22 g~V~DV~veHp~YG-~i~~~L~i~-sr~Dv~~Fi~~l~~~~~~~Ls~LT~GvH~HtI~a~~~e~l~~I~~~L~~~G~L 97 (98)
T PF02829_consen 22 GRVLDVIVEHPVYG-EITGNLNIS-SRRDVDKFIEKLEKSKAKPLSSLTGGVHYHTIEAPDEEDLDKIEEALKKKGFL 97 (98)
T ss_dssp -EEEEEEEEETTTE-EEEEEEEE--SHHHHHHHHHHHHH--S--STTGGGGEEEEEEEESSHHHHHHHHHHHHHTT-B
T ss_pred CEEEEEEEeCCCCc-EEEEEEecC-CHHHHHHHHHHHhccCCcchHHhcCCEeeEEEEECCHHHHHHHHHHHHHCCCc
Confidence 44568998888886 999999995 467777888888888777888887773 5677888999999999984
No 80
>COG4001 Predicted metal-binding protein [General function prediction only]
Probab=31.68 E-value=1.2e+02 Score=23.35 Aligned_cols=39 Identities=15% Similarity=0.366 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCC
Q 021989 132 MRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGA 172 (304)
Q Consensus 132 mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~ 172 (304)
.|.++++...+++....+. ||.|++|.+.++..-..+|.
T Consensus 54 Cra~a~ivkkive~garAf--gVdee~iRE~~~d~ywrrGl 92 (102)
T COG4001 54 CRALASIVKKIVERGARAF--GVDEEDIREQMHDQYWRRGL 92 (102)
T ss_pred HHHHHHHHHHHHHhcchhc--CCCHHHHHHHHHHHHHHHHH
Confidence 3555555555555554443 89999999999998888874
No 81
>PF04363 DUF496: Protein of unknown function (DUF496); InterPro: IPR007458 Members of this family are uncharacterised proteins.
Probab=31.67 E-value=1.4e+02 Score=22.88 Aligned_cols=39 Identities=18% Similarity=0.346 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHH
Q 021989 130 AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIE 169 (304)
Q Consensus 130 e~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~ 169 (304)
..+|.-.+-..- ++...+.|+|+||..||.+++..+--+
T Consensus 26 kKIRDNqKRV~L-LdNL~~YI~~~Ms~edi~~II~nMr~D 64 (95)
T PF04363_consen 26 KKIRDNQKRVLL-LDNLSDYIKPDMSIEDIRAIIENMRSD 64 (95)
T ss_pred HHHhhhHHHHHH-HHHHHHHccCCCCHHHHHHHHHHHHhH
Confidence 356666655544 788899999999999999988876543
No 82
>PF13798 PCYCGC: Protein of unknown function with PCYCGC motif
Probab=31.65 E-value=1e+02 Score=26.26 Aligned_cols=43 Identities=19% Similarity=0.307 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCC
Q 021989 134 AACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSP 176 (304)
Q Consensus 134 ~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~ 176 (304)
..|.++-.+...++.+.+.|.+..||+..+.+.-.+-++.|.|
T Consensus 112 ~~C~vCl~ia~~a~~~~~~Gks~~eIR~~ID~kYk~g~~~pTp 154 (158)
T PF13798_consen 112 TRCGVCLDIAVQAVQMYQEGKSPKEIRQYIDEKYKEGYAKPTP 154 (158)
T ss_pred cccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCCC
Confidence 3478888888888999999999999999999999988888864
No 83
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=31.55 E-value=2.3e+02 Score=27.58 Aligned_cols=83 Identities=16% Similarity=0.216 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCC---------CCCCCeeeecCCCCcccCCCCCCCC
Q 021989 134 AACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGY---------GGFPKSVCTSVNECMCHGIPDSRQL 204 (304)
Q Consensus 134 ~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y---------~gfp~~v~sg~n~~~~H~~p~~r~l 204 (304)
.+.+.|-.+++++.++++||-+-+.|.+.+.+...+.++.|..-+. .|=++++......-.-+ -..-.+
T Consensus 144 DvI~AAh~A~eaa~rllkpgn~n~~vT~~i~k~aas~~c~pVegmlshql~~~~idGeKtIi~n~sdqq~~~--~e~~~f 221 (398)
T KOG2776|consen 144 DVIAAAHLAAEAALRLLKPGNTNTQVTRAIVKTAASYGCKPVEGMLSHQLKQHVIDGEKTIIQNPSDQQKKE--HEKTEF 221 (398)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHhCCcccccchhHHHHhhhhcCCceEecCcchhhhcc--cccccc
Confidence 3445667788889999999999999999999999999887742110 11122222111110000 012356
Q ss_pred CCCCEEEEEeeccc
Q 021989 205 QDGDIINIDVTVYL 218 (304)
Q Consensus 205 ~~GDiv~iD~~~~~ 218 (304)
++.+..-+|+.+..
T Consensus 222 e~~Evya~Di~~st 235 (398)
T KOG2776|consen 222 EEHEVYAIDILVST 235 (398)
T ss_pred ccceeEEEEEEEec
Confidence 77888888887654
No 84
>PF12631 GTPase_Cys_C: Catalytic cysteine-containing C-terminus of GTPase, MnmE; PDB: 1XZQ_A 1XZP_A 2GJ8_D 3GEH_A 3GEI_B 3GEE_A.
Probab=31.32 E-value=1.2e+02 Score=21.90 Aligned_cols=42 Identities=17% Similarity=0.317 Sum_probs=31.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHH
Q 021989 234 VSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEK 275 (304)
Q Consensus 234 ~~~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~~~~~ 275 (304)
.+.+++.+.+.+.+.++.+++.++.|.+..=+..-++..++.
T Consensus 10 ~~~Rq~~~L~~a~~~l~~a~~~l~~~~~~dl~a~~L~~A~~~ 51 (73)
T PF12631_consen 10 TNARQRQLLEQALEHLEDALEALENGLPLDLVAEDLREALES 51 (73)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999997766666555555444
No 85
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=27.68 E-value=61 Score=22.43 Aligned_cols=35 Identities=20% Similarity=0.354 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHH---HHh-cCCC-CcHHHHHHHHHH
Q 021989 131 KMRAACELAARVLDAA---GKL-VRPS-VTTNEIDKAVHQ 165 (304)
Q Consensus 131 ~mR~A~~ia~~~l~~~---~~~-i~pG-vTe~eI~~~~~~ 165 (304)
.+.+|++++.++++.- .+. ++.| +|++|++..++-
T Consensus 10 GYe~aa~iAk~A~~~g~svre~v~~~g~lt~ee~d~ll~p 49 (55)
T PF10415_consen 10 GYEKAAEIAKEALAEGRSVREVVLEEGLLTEEELDELLDP 49 (55)
T ss_dssp HHHHHHHHHHHHHHHT--HHHHHHHTTSS-HHHHHHHTSH
T ss_pred ccHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcCH
Confidence 4678889998888752 332 3356 799999987653
No 86
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=27.45 E-value=1.7e+02 Score=27.88 Aligned_cols=44 Identities=16% Similarity=0.238 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHH----HHHHcCCC
Q 021989 236 DGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISE----HAEKYGFG 279 (304)
Q Consensus 236 ~e~~~l~~~~~ea~~~~i~~~kPG~~~~dI~~~i~~----~~~~~G~~ 279 (304)
.+.++..++-+++....-+.+|||.+.-||-+.+++ .+.+.|..
T Consensus 86 ~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~ 133 (397)
T KOG2775|consen 86 QDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLN 133 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccc
Confidence 356777788888888999999999999999877754 55556554
No 87
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=27.13 E-value=1.6e+02 Score=28.93 Aligned_cols=30 Identities=17% Similarity=0.275 Sum_probs=22.2
Q ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHHH
Q 021989 140 ARVLDAAGKLVRPSVTTNEIDKAVHQMIIE 169 (304)
Q Consensus 140 ~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~ 169 (304)
-.+-.++++.++||+...++....++.+.+
T Consensus 309 Lda~navm~a~KpGv~W~Dmh~La~kvlle 338 (492)
T KOG2737|consen 309 LDASNAVMEAMKPGVWWVDMHKLAEKVLLE 338 (492)
T ss_pred HHHHHHHHHhcCCCCccccHHHHHHHHHHH
Confidence 344456788899999999988877765543
No 88
>PF06135 DUF965: Bacterial protein of unknown function (DUF965); InterPro: IPR009309 This family consists of several hypothetical bacterial proteins. The function of the family is unknown.
Probab=26.51 E-value=74 Score=23.89 Aligned_cols=41 Identities=17% Similarity=0.295 Sum_probs=27.0
Q ss_pred cHHHHHHHHHHHHHHcCCCccCcceeeecCCCCccCCCcCCCCC
Q 021989 261 SFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRK 304 (304)
Q Consensus 261 ~~~dI~~~i~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~~n 304 (304)
..+++-..+-+.+++.||.++..++|.-+- -++-+|..|.|
T Consensus 16 ~~~~iL~~Vy~AL~EKGYnPinQivGYllS---GDPaYItsh~n 56 (79)
T PF06135_consen 16 EIREILKQVYAALEEKGYNPINQIVGYLLS---GDPAYITSHNN 56 (79)
T ss_pred hHHHHHHHHHHHHHHcCCChHHHHHhheec---CCCccccCccc
Confidence 445566667777889999988888777542 34445665544
No 89
>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
Probab=24.95 E-value=1.3e+02 Score=29.96 Aligned_cols=45 Identities=20% Similarity=0.353 Sum_probs=30.7
Q ss_pred CCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCEEEEEeecccCcE
Q 021989 153 SVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGY 221 (304)
Q Consensus 153 GvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~~r~l~~GDiv~iD~~~~~~GY 221 (304)
-+|+.||+..+.....+...+ .|.++.++.||.|.||+.+..+|-
T Consensus 131 ev~d~dvd~~L~~l~~~~a~~------------------------~~~e~~a~~gD~v~IDf~g~iDg~ 175 (441)
T COG0544 131 EVTDEDVDEELEKLRKRFATL------------------------EPVEGAAENGDRVTIDFEGSVDGE 175 (441)
T ss_pred ccCHHHHHHHHHHHHHhcCcc------------------------cccccccccCCEEEEEEEEEEcCe
Confidence 368888888888776664432 122222899999999998755443
No 90
>PRK05423 hypothetical protein; Provisional
Probab=24.45 E-value=1.1e+02 Score=23.91 Aligned_cols=28 Identities=21% Similarity=0.475 Sum_probs=23.2
Q ss_pred HHHHHHHhcCCCCcHHHHHHHHHHHHHH
Q 021989 142 VLDAAGKLVRPSVTTNEIDKAVHQMIIE 169 (304)
Q Consensus 142 ~l~~~~~~i~pGvTe~eI~~~~~~~~~~ 169 (304)
-++...+.|+|+||..||.+++..+--+
T Consensus 44 LLdNL~~YIk~~Ms~e~i~~II~nMr~D 71 (104)
T PRK05423 44 LLDNLSDYIKPGMSIEEIQGIIANMKSD 71 (104)
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHhh
Confidence 4567888899999999999998876544
No 91
>PRK05473 hypothetical protein; Provisional
Probab=23.13 E-value=93 Score=23.74 Aligned_cols=40 Identities=15% Similarity=0.270 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHcCCCccCcceeeecCCCCccCCCcCCCCC
Q 021989 262 FKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRK 304 (304)
Q Consensus 262 ~~dI~~~i~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~~n 304 (304)
.+++-..+-+.+++.||.++..++|.-+- -++-+|..|.|
T Consensus 20 v~eiL~~Vy~AL~EKGYNPinQiVGYllS---GDPaYItsh~n 59 (86)
T PRK05473 20 VREILTTVYDALEEKGYNPINQIVGYLLS---GDPAYIPRHND 59 (86)
T ss_pred HHHHHHHHHHHHHHcCCChHHHHHhhhcc---CCCCccCCccc
Confidence 34455556667788999987777777542 34445666554
No 92
>PRK00464 nrdR transcriptional regulator NrdR; Validated
Probab=21.93 E-value=2.4e+02 Score=23.92 Aligned_cols=40 Identities=13% Similarity=0.067 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCC
Q 021989 135 ACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYP 174 (304)
Q Consensus 135 A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~p 174 (304)
+..+++.+...+.......++..||...+.+.|.+.|-..
T Consensus 84 ~~~i~~~V~~~l~~~~~~~IsveEIqDiVE~~L~~~~~~a 123 (154)
T PRK00464 84 IEAAVSRIERQLRASGEREVPSKEIGELVMEELKKLDEVA 123 (154)
T ss_pred HHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHhcCCEE
Confidence 3345555655555555568999999999999999998643
No 93
>PF09506 Salt_tol_Pase: Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase); InterPro: IPR012765 Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=21.33 E-value=3.4e+02 Score=26.25 Aligned_cols=126 Identities=17% Similarity=0.286 Sum_probs=88.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCC----CCe---------------
Q 021989 125 DSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGF----PKS--------------- 185 (304)
Q Consensus 125 s~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gf----p~~--------------- 185 (304)
|+.||+.+-++-..-...+......+-|..++.||...++..+.+.-..|+. |+.++ +.-
T Consensus 98 s~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~sVldt~~SPTi-NlN~lf~~~~~d~~~~~~LQ~~~~~lM 176 (381)
T PF09506_consen 98 SDAELAFLAAVPERMEALLKEFLPAILPELSQEEIEKLIEASVLDTRVSPTI-NLNSLFDLVPDDVERQQQLQQMMQELM 176 (381)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCcc-chHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999999999999999998877752 22111 100
Q ss_pred -------eeec-CCCCcccCCCCCC----------CCCCCCEEEEEeec-------------ccCcEEeceeeeEEcc--
Q 021989 186 -------VCTS-VNECMCHGIPDSR----------QLQDGDIINIDVTV-------------YLNGYHGDTSKTFLCG-- 232 (304)
Q Consensus 186 -------v~sg-~n~~~~H~~p~~r----------~l~~GDiv~iD~~~-------------~~~GY~~D~sRT~~vG-- 232 (304)
-+-| .|....|+.|+-. +-..||+=.-|+-- -.+-|..+-|-++++|
T Consensus 177 ~~Ll~~A~~~GL~~SFFlH~aPNLGrd~~G~E~lk~A~~~d~GTTDiQfml~GaiKEaGlL~LlN~~i~~rtG~~PlG~~ 256 (381)
T PF09506_consen 177 NELLEKAEAQGLENSFFLHYAPNLGRDANGREILKPATAGDVGTTDIQFMLRGAIKEAGLLVLLNRYIAQRTGKAPLGED 256 (381)
T ss_pred HHHHHHHHhCCcccceEEEeCCCCCCCCCcceeecccccCCCCchhhhhhhhhhhhhcchhHHHHHHHHhhcCCCCccCc
Confidence 1223 4567788887522 23446666666532 2355666666666666
Q ss_pred ----CCCHHHHHHHHHHHHHHHH
Q 021989 233 ----NVSDGLKRLVKVTEECLEK 251 (304)
Q Consensus 233 ----~~~~e~~~l~~~~~ea~~~ 251 (304)
+.+.....+++-+.+....
T Consensus 257 FNvR~AP~~h~~Ll~L~~~~i~~ 279 (381)
T PF09506_consen 257 FNVRQAPKSHQELLDLCKENIPP 279 (381)
T ss_pred cccccCchhHHHHHHHHHhhCCH
Confidence 3677788888888776654
No 94
>TIGR02399 salt_tol_Pase glucosylglycerol 3-phosphatase. Proteins in this family are glucosylglycerol-phosphate phosphatase, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=21.07 E-value=3.3e+02 Score=26.36 Aligned_cols=127 Identities=17% Similarity=0.266 Sum_probs=88.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCC----CC----------------
Q 021989 125 DSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGF----PK---------------- 184 (304)
Q Consensus 125 s~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gf----p~---------------- 184 (304)
|+.||+.+-++-..-...+......+-|..++.||...++..+.+.-..|+. |+.++ +.
T Consensus 104 s~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~aVldt~~SPTi-NlN~lf~~v~~d~~~~~~LQ~~~~~lM 182 (389)
T TIGR02399 104 SKEEVDFLAAVPDLMRPSLEQIVKKIFPNLVQEEIQTHASKSVLDTRFSPTI-NLNSLFDLVKDDSEIRKILQKSFEDLM 182 (389)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCcc-chHHHHHHccchHHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999999999999999988877752 22110 00
Q ss_pred ------eeeec-CCCCcccCCCCC---------CCCCCCCEEEEEeec-------------ccCcEEeceeeeEEcc---
Q 021989 185 ------SVCTS-VNECMCHGIPDS---------RQLQDGDIINIDVTV-------------YLNGYHGDTSKTFLCG--- 232 (304)
Q Consensus 185 ------~v~sg-~n~~~~H~~p~~---------r~l~~GDiv~iD~~~-------------~~~GY~~D~sRT~~vG--- 232 (304)
.-+-| .|....|+.|+- ++-..||+=.-|+-- -.+-|..+=|-++++|
T Consensus 183 ~~Ll~~A~~~GL~~SFFlH~aPNLG~d~G~E~lk~A~~~d~GTTDiQfml~GaiKEaGlL~LlN~~i~~rtG~~PlG~~F 262 (389)
T TIGR02399 183 NELMYKAKTQGLENSFFLHIAPNLGSDNGNEIIKLASKGDIGTTDIQFMLKGAVKEAGVLFLLNKFIYDSTGIAPLGRNF 262 (389)
T ss_pred HHHHHHHHhCCcccceEEEeCCcCCCccccEeecccCCCCCCchhhHHHhcchhhhhhHHHHHHHHHHhccCCCCCCCCC
Confidence 01223 456778887741 234457776666542 2345555555556665
Q ss_pred ---CCCHHHHHHHHHHHHHHHHH
Q 021989 233 ---NVSDGLKRLVKVTEECLEKG 252 (304)
Q Consensus 233 ---~~~~e~~~l~~~~~ea~~~~ 252 (304)
+.+.....+++-+.+.....
T Consensus 263 NvR~AP~~h~~Ll~L~~~~i~~~ 285 (389)
T TIGR02399 263 NFRDAPKSHQELLNLCKKHIKPE 285 (389)
T ss_pred ccccCCccHHHHHHHHHhcCCHH
Confidence 46777888888877766543
No 95
>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.
Probab=20.28 E-value=2.1e+02 Score=24.69 Aligned_cols=54 Identities=17% Similarity=0.294 Sum_probs=37.6
Q ss_pred CCCCCCCCCEEEEEeecc-cCcEEeceee-----eEEccCCCHHHHHHHHHHHHHHHHHHHHccCCCcH
Q 021989 200 DSRQLQDGDIINIDVTVY-LNGYHGDTSK-----TFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASF 262 (304)
Q Consensus 200 ~~r~l~~GDiv~iD~~~~-~~GY~~D~sR-----T~~vG~~~~e~~~l~~~~~ea~~~~i~~~kPG~~~ 262 (304)
+....++||.|.+++... .+|-..|-++ +|.+|. ..+...++.++..+++|-+.
T Consensus 82 ~g~~p~~gd~V~v~Y~~~~~dG~v~~ss~~~~P~~f~vg~---------~~vi~Gl~e~L~~Mk~Ge~~ 141 (177)
T TIGR03516 82 EGTTPEFGDLVTFEYDIRALDGDVIYSEEELGPQTYKVDQ---------QDLFSGLRDGLKLMKEGETA 141 (177)
T ss_pred CCCcCCCCCEEEEEEEEEeCCCCEEEeCCCCCCEEEEeCC---------cchhHHHHHHHcCCCCCCEE
Confidence 334568999999999776 5676655553 566664 12456677888889999654
No 96
>cd01669 TGS_Ygr210_C TGS_Ygr210_C: The C-terminal TGS domain of Ygr210 GTP-binding protein which is a member of Obg-like family of GTPases, and present in archaea. Several Obg-like family members possess a C-terminal RNA-binding domain, the TGS domain, which is also present in threonyl-tRNA synthetase and in bacterial guanosine polyphosphatase SpoT. TGS is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=20.07 E-value=2.6e+02 Score=20.55 Aligned_cols=48 Identities=19% Similarity=0.324 Sum_probs=31.0
Q ss_pred cCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCEEEE
Q 021989 150 VRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINI 212 (304)
Q Consensus 150 i~pGvTe~eI~~~~~~~~~~~G~~ps~l~y~gfp~~v~sg~n~~~~H~~p~~r~l~~GDiv~i 212 (304)
++.|-|-.|.+..+|..+.+. |-..+-. .| ....+-+.+|++||+|.|
T Consensus 27 l~~GaTv~D~A~~IHtdi~~~-----------f~~Ai~~-k~---~~~vg~~~~L~dgDvV~I 74 (76)
T cd01669 27 LPKGSTARDLAYAIHTDIGDG-----------FLHAIDA-RT---GRRVGEDYELKHRDVIKI 74 (76)
T ss_pred ECCCCCHHHHHHHHHHHHHhc-----------ceeeEEe-eC---CEEeCCCcEecCCCEEEE
Confidence 566889999999999777542 1111101 11 233456889999999976
Done!