Query 021992
Match_columns 304
No_of_seqs 317 out of 1685
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 07:11:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021992.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021992hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2738 Putative methionine am 100.0 1.4E-68 3E-73 480.6 20.2 237 68-304 69-312 (369)
2 PLN03158 methionine aminopepti 100.0 3.9E-59 8.5E-64 448.4 19.5 237 68-304 90-333 (396)
3 COG0024 Map Methionine aminope 100.0 3.7E-48 7.9E-53 350.0 16.7 196 109-304 4-203 (255)
4 PRK12318 methionine aminopepti 100.0 5.3E-46 1.2E-50 345.9 18.0 197 108-304 41-240 (291)
5 PRK12897 methionine aminopepti 100.0 4.6E-46 9.9E-51 338.9 16.3 197 108-304 2-200 (248)
6 PRK07281 methionine aminopepti 100.0 6.2E-46 1.3E-50 344.2 15.3 197 108-304 2-231 (286)
7 TIGR00500 met_pdase_I methioni 100.0 1.3E-44 2.9E-49 328.6 16.8 196 109-304 2-199 (247)
8 PRK12896 methionine aminopepti 100.0 1.1E-43 2.4E-48 323.6 16.6 199 106-304 6-207 (255)
9 PRK05716 methionine aminopepti 100.0 1.8E-43 3.8E-48 321.8 16.5 197 108-304 3-201 (252)
10 PRK09795 aminopeptidase; Provi 100.0 9.1E-43 2E-47 333.3 13.8 194 104-304 121-320 (361)
11 COG0006 PepP Xaa-Pro aminopept 100.0 7.6E-42 1.7E-46 329.4 13.9 197 101-304 145-345 (384)
12 cd01086 MetAP1 Methionine Amin 100.0 3.6E-40 7.9E-45 297.6 16.0 189 116-304 1-191 (238)
13 cd01090 Creatinase Creatine am 100.0 5.6E-40 1.2E-44 295.6 15.5 189 116-304 1-194 (228)
14 TIGR02993 ectoine_eutD ectoine 100.0 3.4E-40 7.4E-45 318.7 13.4 196 101-304 149-353 (391)
15 PRK10879 proline aminopeptidas 100.0 4.2E-40 9.1E-45 322.1 13.6 194 104-304 167-380 (438)
16 PRK15173 peptidase; Provisiona 100.0 3.3E-40 7.2E-45 311.3 12.3 197 100-304 85-284 (323)
17 cd01087 Prolidase Prolidase. E 100.0 8.3E-40 1.8E-44 296.4 14.2 183 116-304 1-203 (243)
18 PRK14575 putative peptidase; P 100.0 8.8E-40 1.9E-44 317.3 13.1 198 99-304 167-367 (406)
19 PRK14576 putative endopeptidas 100.0 1.9E-39 4.1E-44 314.8 13.2 196 101-304 168-366 (405)
20 cd01092 APP-like Similar to Pr 100.0 1.5E-38 3.4E-43 280.2 15.6 182 116-304 1-183 (208)
21 TIGR00495 crvDNA_42K 42K curve 100.0 1.9E-37 4.2E-42 298.4 16.1 196 108-304 11-227 (389)
22 PF00557 Peptidase_M24: Metall 100.0 1.5E-37 3.2E-42 274.3 11.4 181 117-304 1-184 (207)
23 PRK13607 proline dipeptidase; 100.0 3.5E-37 7.6E-42 301.5 14.1 196 102-304 153-383 (443)
24 PTZ00053 methionine aminopepti 100.0 1.5E-36 3.1E-41 295.4 16.1 190 106-304 148-355 (470)
25 cd01085 APP X-Prolyl Aminopept 100.0 1.8E-36 3.8E-41 272.2 13.8 181 118-304 6-194 (224)
26 cd01066 APP_MetAP A family inc 100.0 1.2E-35 2.7E-40 258.9 15.2 181 116-304 1-182 (207)
27 PRK08671 methionine aminopepti 100.0 1.2E-35 2.5E-40 276.6 14.5 179 115-304 1-184 (291)
28 TIGR00501 met_pdase_II methion 100.0 3.2E-35 6.8E-40 274.2 15.5 181 113-304 2-187 (295)
29 cd01088 MetAP2 Methionine Amin 100.0 1.2E-34 2.5E-39 269.9 15.0 178 116-304 1-183 (291)
30 cd01091 CDC68-like Related to 100.0 2.1E-34 4.5E-39 261.8 12.9 186 116-304 1-202 (243)
31 cd01089 PA2G4-like Related to 100.0 4.6E-33 9.9E-38 250.5 15.4 186 116-304 1-198 (228)
32 KOG2414 Putative Xaa-Pro amino 100.0 4.4E-30 9.6E-35 240.3 9.4 193 103-304 221-432 (488)
33 KOG2737 Putative metallopeptid 100.0 1.9E-28 4.1E-33 227.4 10.3 199 102-304 177-410 (492)
34 KOG1189 Global transcriptional 99.9 1.8E-21 3.9E-26 193.1 11.0 208 91-304 118-340 (960)
35 KOG2413 Xaa-Pro aminopeptidase 99.7 2.7E-17 5.9E-22 161.3 10.7 196 104-304 301-511 (606)
36 KOG2776 Metallopeptidase [Gene 99.7 1.4E-16 3.1E-21 147.7 10.2 193 109-303 14-228 (398)
37 KOG2775 Metallopeptidase [Gene 99.7 2.5E-16 5.5E-21 143.1 9.8 185 111-304 80-282 (397)
38 COG5406 Nucleosome binding fac 99.6 1.5E-15 3.3E-20 148.8 9.6 205 97-304 157-381 (1001)
39 cd01066 APP_MetAP A family inc 97.3 0.0011 2.3E-08 57.3 8.3 102 117-220 102-204 (207)
40 cd01092 APP-like Similar to Pr 96.9 0.0046 1E-07 54.0 8.5 101 117-219 103-204 (208)
41 PRK05716 methionine aminopepti 96.8 0.0044 9.6E-08 56.1 7.9 100 118-220 119-240 (252)
42 PLN03158 methionine aminopepti 96.6 0.0044 9.5E-08 60.5 6.6 96 207-304 126-226 (396)
43 PRK15173 peptidase; Provisiona 96.6 0.0089 1.9E-07 56.7 8.5 103 117-219 202-305 (323)
44 TIGR00500 met_pdase_I methioni 96.6 0.0087 1.9E-07 54.2 8.1 85 118-205 117-205 (247)
45 cd01086 MetAP1 Methionine Amin 96.5 0.012 2.6E-07 52.8 8.4 87 118-205 109-197 (238)
46 PRK12897 methionine aminopepti 96.5 0.011 2.5E-07 53.6 8.0 100 118-220 118-239 (248)
47 PRK14575 putative peptidase; P 96.4 0.013 2.8E-07 57.3 8.3 103 118-220 286-389 (406)
48 PRK14576 putative endopeptidas 96.3 0.015 3.3E-07 56.8 8.3 103 117-219 284-387 (405)
49 PRK12896 methionine aminopepti 96.3 0.015 3.3E-07 52.7 7.6 92 211-304 3-99 (255)
50 cd01090 Creatinase Creatine am 96.2 0.021 4.5E-07 51.4 8.1 100 118-220 110-220 (228)
51 PRK12318 methionine aminopepti 96.2 0.02 4.4E-07 53.5 8.2 87 118-207 159-248 (291)
52 TIGR02993 ectoine_eutD ectoine 96.2 0.016 3.6E-07 56.3 7.9 98 118-219 271-373 (391)
53 PRK09795 aminopeptidase; Provi 96.1 0.025 5.4E-07 54.3 8.6 105 113-219 236-341 (361)
54 PRK08671 methionine aminopepti 96.1 0.048 1E-06 51.0 10.0 95 118-219 102-205 (291)
55 cd01088 MetAP2 Methionine Amin 96.0 0.051 1.1E-06 50.8 9.9 95 118-219 101-204 (291)
56 cd01091 CDC68-like Related to 95.9 0.018 3.9E-07 52.5 6.0 104 117-220 119-234 (243)
57 PRK07281 methionine aminopepti 95.9 0.028 6.1E-07 52.5 7.4 85 118-205 149-237 (286)
58 cd01087 Prolidase Prolidase. E 95.8 0.028 6E-07 50.7 7.1 102 118-219 104-234 (243)
59 PF00557 Peptidase_M24: Metall 95.8 0.026 5.7E-07 49.3 6.5 97 119-218 104-205 (207)
60 COG0024 Map Methionine aminope 95.4 0.043 9.4E-07 50.3 6.6 80 223-304 12-95 (255)
61 cd01089 PA2G4-like Related to 95.0 0.056 1.2E-06 48.5 6.1 99 117-220 120-220 (228)
62 TIGR00501 met_pdase_II methion 95.0 0.091 2E-06 49.2 7.6 93 119-218 106-207 (295)
63 TIGR00495 crvDNA_42K 42K curve 94.4 0.13 2.9E-06 50.1 7.5 102 117-218 138-248 (389)
64 KOG2738 Putative methionine am 93.8 0.16 3.5E-06 47.4 6.2 42 223-264 123-164 (369)
65 COG0006 PepP Xaa-Pro aminopept 93.5 0.24 5.2E-06 47.9 7.3 100 119-220 264-367 (384)
66 PRK10879 proline aminopeptidas 93.1 0.37 8.1E-06 47.6 8.1 101 119-219 284-410 (438)
67 PTZ00053 methionine aminopepti 92.6 0.42 9.1E-06 47.7 7.6 96 118-219 264-376 (470)
68 cd01085 APP X-Prolyl Aminopept 87.6 3 6.5E-05 37.3 8.2 96 120-219 114-215 (224)
69 PRK13607 proline dipeptidase; 87.2 2.1 4.5E-05 42.5 7.4 89 119-207 270-391 (443)
70 KOG2775 Metallopeptidase [Gene 77.1 4.4 9.4E-05 38.1 4.9 77 223-302 86-167 (397)
71 KOG1189 Global transcriptional 76.0 6 0.00013 41.5 5.9 98 119-220 259-368 (960)
72 cd01666 TGS_DRG_C TGS_DRG_C: 62.6 14 0.0003 27.5 4.0 52 137-199 21-73 (75)
73 PRK01490 tig trigger factor; P 59.8 30 0.00064 34.0 7.0 76 139-247 130-209 (435)
74 COG5406 Nucleosome binding fac 55.2 27 0.00058 36.2 5.8 72 128-203 309-385 (1001)
75 TIGR00115 tig trigger factor. 55.0 41 0.00089 32.7 7.1 76 139-246 118-197 (408)
76 PF00254 FKBP_C: FKBP-type pep 52.2 18 0.00038 27.1 3.2 51 188-247 2-59 (94)
77 PF03477 ATP-cone: ATP cone do 40.4 28 0.00061 26.0 2.7 37 123-159 38-74 (90)
78 TIGR03516 ppisom_GldI peptidyl 37.0 1.9E+02 0.0042 24.8 7.7 55 186-249 81-141 (177)
79 cd04938 TGS_Obg-like TGS_Obg-l 36.5 39 0.00083 25.0 2.8 47 137-199 28-74 (76)
80 COG0544 Tig FKBP-type peptidyl 28.5 1E+02 0.0023 30.6 5.2 45 140-208 131-175 (441)
81 KOG2872 Uroporphyrinogen decar 27.6 1.1E+02 0.0023 29.0 4.7 103 144-279 234-340 (359)
82 PF05184 SapB_1: Saposin-like 27.2 48 0.001 20.5 1.7 34 122-155 3-36 (39)
83 PF02829 3H: 3H domain; Inter 25.7 1.2E+02 0.0026 23.7 4.1 67 197-265 23-96 (98)
84 KOG2611 Neurochondrin/leucine- 25.6 41 0.00088 34.0 1.7 66 194-259 584-659 (698)
85 PRK05728 DNA polymerase III su 24.7 4E+02 0.0086 21.9 8.2 99 118-226 14-117 (142)
86 PRK06646 DNA polymerase III su 24.1 4.4E+02 0.0095 22.2 8.6 40 117-157 13-52 (154)
87 cd01669 TGS_Ygr210_C TGS_Ygr21 21.9 1.4E+02 0.003 22.0 3.6 48 137-199 27-74 (76)
88 PF10415 FumaraseC_C: Fumarase 20.3 91 0.002 21.6 2.2 34 118-151 10-48 (55)
89 PF12631 GTPase_Cys_C: Catalyt 20.3 1.8E+02 0.0039 21.0 3.9 42 221-262 10-51 (73)
No 1
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-68 Score=480.60 Aligned_cols=237 Identities=60% Similarity=1.042 Sum_probs=226.0
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCC-CCcccchhhhHHHHhhhhhHHHHHHhcCccccCCcC
Q 021992 68 PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKP----IGIVS-GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGIT 142 (304)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~vp~~i~~p~y~~~~~~----~~~~~-~R~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvT 142 (304)
.+.|+++||||++||+|.||+||++|+|+.+|.+ +.... ...|++++||+.||+||+++++++++|..+++||+|
T Consensus 69 ~~~~~g~Lr~~pvsprr~VP~hI~rPdya~~g~s~se~~~~~s~~i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~PgvT 148 (369)
T KOG2738|consen 69 KFRFTGPLRPGPVSPRRPVPDHIPRPDYADSGVSLSEQPEISSNEIKILDPEGIEGMRKACRLAREVLDYAATLVRPGVT 148 (369)
T ss_pred cccccCCccccCCCCCCcCCccCCCCchhhcCCcccccccccccceeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCcc
Confidence 3889999999999999999999999999999653 22222 457899999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCCCCCCCCCCeeEEeEEEEeccccCCCcceEEeccCC
Q 021992 143 TDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD 222 (304)
Q Consensus 143 e~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~ 222 (304)
++|||+++|++++++|+|||||||++||+++|+|+|+++|||+||.|+|++||||+||++++++|||+|+++||+||+++
T Consensus 149 TdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvNiDVtvY~~GyHGDlneTffvG~Vd 228 (369)
T KOG2738|consen 149 TDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYHGDLNETFFVGNVD 228 (369)
T ss_pred HHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCCcCcCCCCCEEeEEEEEEeccccCccccceEeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCcceeeeecccccccccccCceEEeeccC--cccccccc
Q 021992 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYSNY--PELYRSSI 300 (304)
Q Consensus 223 ~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~~~~~~~~GHgIG~~~hE~P~i~~~~~~--~~vLe~GM 300 (304)
++.++|++++++|++.||+.+|||+++.+|++.|++++.++||++++.|+|||||..||..|+|+||.+| ..++.+||
T Consensus 229 e~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sVVr~ycGHGig~~FH~~PnipHya~n~a~GvM~~G~ 308 (369)
T KOG2738|consen 229 EKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSVVRSYCGHGIGRVFHCAPNIPHYAKNKAPGVMKPGQ 308 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCceeehhhhccccccccccCCCchhhcccCCcceeecCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999875 46899999
Q ss_pred eeeC
Q 021992 301 LFLV 304 (304)
Q Consensus 301 Vf~V 304 (304)
+|++
T Consensus 309 tFTI 312 (369)
T KOG2738|consen 309 TFTI 312 (369)
T ss_pred eEEe
Confidence 9985
No 2
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=3.9e-59 Score=448.43 Aligned_cols=237 Identities=47% Similarity=0.856 Sum_probs=226.7
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCcccchhhhHHHHhhhhhHHHHHHhcCccccCCcC
Q 021992 68 PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPI-----GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGIT 142 (304)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~vp~~i~~p~y~~~~~~~-----~~~~~R~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvT 142 (304)
.|+|+++||||++||++.||+||++|+|+.++.+. .+...|.|||++||+.||+|+++++++++.+.+.++||+|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~p~~i~~p~y~~~~~~~~~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvT 169 (396)
T PLN03158 90 DFDWTGPLRPYPISPRRVVPDHIPKPDWALDGTPKIEPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVT 169 (396)
T ss_pred CCCCCcccccCCCCCCCCCCccCCCCccccCCCCccccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Confidence 38899999999999999999999999999886532 3567899999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCCCCCCCCCCeeEEeEEEEeccccCCCcceEEeccCC
Q 021992 143 TDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD 222 (304)
Q Consensus 143 e~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~ 222 (304)
|.||+++++++++++|++|++++|.+||+++|+|.|+++|||+|++++|++||+|++|++++++||++|++|||++|+++
T Consensus 170 e~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~~i~Hgip~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~VG~~~ 249 (396)
T PLN03158 170 TDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFVGNVD 249 (396)
T ss_pred HHHHHHHHHHHHHHcCCccccccccCCCceeeecccccccCCCCCCccCCCCCEEEEEEeEEECCEEEeEEeEEEcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCcceeeeecccccccccccCceEEeeccCc--ccccccc
Q 021992 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYSNYP--ELYRSSI 300 (304)
Q Consensus 223 ~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~~~~~~~~GHgIG~~~hE~P~i~~~~~~~--~vLe~GM 300 (304)
++++++++++++|++++++++|||++++||++++++++++.||+++++++|||||+.+||.|.|.|+.++. .+|++||
T Consensus 250 ~e~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~~~~~~~G~~~v~~~~GHGIG~~~He~P~i~~~~~~~~~~~l~~GM 329 (396)
T PLN03158 250 EASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGLSVVKSYCGHGIGELFHCAPNIPHYARNKAVGVMKAGQ 329 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCCCccCCccCCccccccCCCCCCCcccCCCCCCEecCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999998876544 7999999
Q ss_pred eeeC
Q 021992 301 LFLV 304 (304)
Q Consensus 301 Vf~V 304 (304)
||+|
T Consensus 330 VfTI 333 (396)
T PLN03158 330 VFTI 333 (396)
T ss_pred EEEE
Confidence 9986
No 3
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.7e-48 Score=350.04 Aligned_cols=196 Identities=40% Similarity=0.758 Sum_probs=187.5
Q ss_pred cccchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCC-
Q 021992 109 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD- 187 (304)
Q Consensus 109 ~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~- 187 (304)
.+|+++||+.||+||+|++++++.+.+.++||+|+.||+..+++++.++|++|++++|.+||.++|+|.|+++|||+|+
T Consensus 4 ~ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~v~HgiP~d 83 (255)
T COG0024 4 SIKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEVVAHGIPGD 83 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhheeeecCCCC
Confidence 4899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCeeEEeEEEEeccccCCCcceEEeccCC-HHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCcc
Q 021992 188 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD-DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYG 266 (304)
Q Consensus 188 ~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~-~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~~ 266 (304)
+++|++||+|+||+|+.++||++|.++||.||+.+ +..++|.+++++|++++|+.+|||++++||+++|+++++++||.
T Consensus 84 ~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~~~G~~ 163 (255)
T COG0024 84 KKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAESRGFS 163 (255)
T ss_pred CcccCCCCEEEEEEEEEECCeeeeEEEEEECCCCChHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCE
Confidence 67899999999999999999999999999999766 57777999999999999999999999999999999999999999
Q ss_pred eeeeecccccccccccCceEEeeccC--cccccccceeeC
Q 021992 267 VVRQFVGHGIGRVFHADPVVLHYSNY--PELYRSSILFLV 304 (304)
Q Consensus 267 ~~~~~~GHgIG~~~hE~P~i~~~~~~--~~vLe~GMVf~V 304 (304)
+++.|+|||||..+||.|.|+||.++ ...|++||||++
T Consensus 164 vVr~~~GHgig~~~He~p~ip~y~~~~~~~~l~~Gmv~aI 203 (255)
T COG0024 164 VVRNLTGHGIGRELHEEPSIPNYGKDGTGVRLKEGMVFAI 203 (255)
T ss_pred EeecccCCccCcccCCCCeeccccCCCCCcccCCCCEEEE
Confidence 99999999999999999999997543 369999999985
No 4
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=5.3e-46 Score=345.90 Aligned_cols=197 Identities=37% Similarity=0.717 Sum_probs=186.1
Q ss_pred CcccchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCC--CCCccccccccceeecCC
Q 021992 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYG--GFPKSVCTSVNECICHGI 185 (304)
Q Consensus 108 R~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~--gfp~~v~sg~n~~~~Hg~ 185 (304)
+.|||++||++||+|+++++++++++.+.++||+||.||++++++.+.++|+.++.++|. +|+.++|+|.|+.++|+.
T Consensus 41 i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~~g~n~~~~H~~ 120 (291)
T PRK12318 41 IIIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTICTSLNEVICHGI 120 (291)
T ss_pred eEECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceEeeccceeecCC
Confidence 369999999999999999999999999999999999999999999999999988877774 599999999999999999
Q ss_pred CCCCCCCCCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCc
Q 021992 186 PDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY 265 (304)
Q Consensus 186 p~~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~ 265 (304)
|++++|++||+|++|+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||++++++++++.||
T Consensus 121 p~~~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~ 200 (291)
T PRK12318 121 PNDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGF 200 (291)
T ss_pred CCCCccCCCCEEEEEEeEEECcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeecccccccccccCceEEee-ccCcccccccceeeC
Q 021992 266 GVVRQFVGHGIGRVFHADPVVLHY-SNYPELYRSSILFLV 304 (304)
Q Consensus 266 ~~~~~~~GHgIG~~~hE~P~i~~~-~~~~~vLe~GMVf~V 304 (304)
....+++|||||+.+||.|.|.++ .+++.+|++||||+|
T Consensus 201 ~~~~~~~GHgIGl~~hE~P~i~~~~~~~~~~L~~GMV~~i 240 (291)
T PRK12318 201 SVVDQFVGHGVGIKFHENPYVPHHRNSSKIPLAPGMIFTI 240 (291)
T ss_pred ccCCCcccCCcCccccCCCcccCcCCCCCCEeCCCCEEEE
Confidence 977889999999999999998654 345689999999986
No 5
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=4.6e-46 Score=338.93 Aligned_cols=197 Identities=32% Similarity=0.595 Sum_probs=187.1
Q ss_pred CcccchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCC
Q 021992 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD 187 (304)
Q Consensus 108 R~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~ 187 (304)
..|||++||++||+|+++++++++++.+.++||+||.||++.+++.+.++|+.....+|.+|+.++|+|+|+..+|+.|+
T Consensus 2 ~~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~~~~H~~p~ 81 (248)
T PRK12897 2 ITIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDEMCHAFPA 81 (248)
T ss_pred ceeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCCEeecCCCC
Confidence 47999999999999999999999999999999999999999999999999998765667789999999999999999999
Q ss_pred CCCCCCCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCcce
Q 021992 188 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV 267 (304)
Q Consensus 188 ~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~~~ 267 (304)
+++|++||+|++|+++.++||++|++|||++|+++++++++|++++++++++++++|||++++||++++++++++.||..
T Consensus 82 ~~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~ 161 (248)
T PRK12897 82 DVPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSV 161 (248)
T ss_pred CcccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eeeecccccccccccCceEEee--ccCcccccccceeeC
Q 021992 268 VRQFVGHGIGRVFHADPVVLHY--SNYPELYRSSILFLV 304 (304)
Q Consensus 268 ~~~~~GHgIG~~~hE~P~i~~~--~~~~~vLe~GMVf~V 304 (304)
..+++|||||+.+||.|.+.++ .+++.+|++||||+|
T Consensus 162 ~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~l~~Gmv~ti 200 (248)
T PRK12897 162 ARDFTGHGIGKEIHEEPAIFHFGKQGQGPELQEGMVITI 200 (248)
T ss_pred CCCeEECccCCcccCCCccCCCCCCCCCCCcCCCCEEEE
Confidence 8899999999999999998653 356789999999985
No 6
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=6.2e-46 Score=344.24 Aligned_cols=197 Identities=27% Similarity=0.522 Sum_probs=186.4
Q ss_pred CcccchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCC----CCCCccccccccceeec
Q 021992 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGY----GGFPKSVCTSVNECICH 183 (304)
Q Consensus 108 R~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y----~gfp~~v~sg~n~~~~H 183 (304)
..+||++||++||+|+++++++++++.+.++||+||.||++.+++.+.+.|+.++.+++ .+||+++|+|.|+.++|
T Consensus 2 ~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~H 81 (286)
T PRK07281 2 ITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVAH 81 (286)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEeccccccC
Confidence 57999999999999999999999999999999999999999999999999998877765 35999999999999999
Q ss_pred CCCCCCCCCCCCeeEEeEEE---------------------------EeccccCCCcceEEeccCCHHHHHHHHHhHHHH
Q 021992 184 GIPDSRALEDGDTINIDVTV---------------------------YLNGYHGDTSATFFCGDVDDEARNLVKVTKDCL 236 (304)
Q Consensus 184 g~p~~r~L~~GDiV~iDvg~---------------------------~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~ 236 (304)
+.|++++|++||+|++|+++ .|+||++|++|||++|+++++++++++++++|+
T Consensus 82 ~~p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~~~~~~~~l~~~~~ea~ 161 (286)
T PRK07281 82 AFPRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGTPSDEVKNLMDVTKEAM 161 (286)
T ss_pred CCCCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999997 489999999999999999999999999999999
Q ss_pred HHhhhhcCCCchhhHhhhhHHHhhhhcCcceeeeecccccccccccCceEEee--ccCcccccccceeeC
Q 021992 237 HKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHY--SNYPELYRSSILFLV 304 (304)
Q Consensus 237 ~~ai~~~rPG~~~~dI~~ai~~~~~~~G~~~~~~~~GHgIG~~~hE~P~i~~~--~~~~~vLe~GMVf~V 304 (304)
+++++++|||++++||++++++++++.||+.+.+++|||||+.+||.|.+.++ ++++.+|++||||+|
T Consensus 162 ~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~~~~~~GHGIGl~~hE~P~i~~~~~~~~~~~Le~GMV~ti 231 (286)
T PRK07281 162 YRGIEQAVVGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTI 231 (286)
T ss_pred HHHHHHhcCCCcHHHHHHHHHHHHHHcCCccCCCeeeeeCCCccCCCCcCCCcccCCCCCEECCCCEEEE
Confidence 99999999999999999999999999999988899999999999999998654 467889999999986
No 7
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=1.3e-44 Score=328.55 Aligned_cols=196 Identities=44% Similarity=0.768 Sum_probs=186.5
Q ss_pred cccchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCCC
Q 021992 109 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDS 188 (304)
Q Consensus 109 ~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~ 188 (304)
.|||++||++||+|+++++++++.+.+.++||+||.||++.+++.+.++|+.+...++.+||.++++|.|+.++|+.|++
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~H~~~~~ 81 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDK 81 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEeccccEEEecCCCC
Confidence 69999999999999999999999999999999999999999999999999988767777899899999999999999999
Q ss_pred CCCCCCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCccee
Q 021992 189 RALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVV 268 (304)
Q Consensus 189 r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~~~~ 268 (304)
++|++||+|++|+++.|+||++|++|||++|+++++++++++++.++++++++.+|||++++||++++++++++.||...
T Consensus 82 ~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~ 161 (247)
T TIGR00500 82 KVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV 161 (247)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred eeecccccccccccCceEEee--ccCcccccccceeeC
Q 021992 269 RQFVGHGIGRVFHADPVVLHY--SNYPELYRSSILFLV 304 (304)
Q Consensus 269 ~~~~GHgIG~~~hE~P~i~~~--~~~~~vLe~GMVf~V 304 (304)
.+++|||||+.+||.|.+..+ .+++.+|++||||+|
T Consensus 162 ~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~i 199 (247)
T TIGR00500 162 REYCGHGIGRKFHEEPQIPNYGKKFTNVRLKEGMVFTI 199 (247)
T ss_pred cCccCCccCcccCCCCccCCcCcCCCCCEecCCCEEEE
Confidence 789999999999999987544 356899999999986
No 8
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.1e-43 Score=323.58 Aligned_cols=199 Identities=43% Similarity=0.775 Sum_probs=187.3
Q ss_pred CCCcccchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCC
Q 021992 106 SGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI 185 (304)
Q Consensus 106 ~~R~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~ 185 (304)
+.+.|||++||++||+|+++++++++.+.+.++||+||.||++.+++.+.++|+.+++..+.+||..+|+|.|+..+|+.
T Consensus 6 ~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~h~~ 85 (255)
T PRK12896 6 RGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEEVAHGI 85 (255)
T ss_pred CceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCCeeEecC
Confidence 44679999999999999999999999999999999999999999999999999998877778899999999999999999
Q ss_pred CCCCCCCCCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCc
Q 021992 186 PDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY 265 (304)
Q Consensus 186 p~~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~ 265 (304)
|++++|++||+|++|+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||++++++++++.||
T Consensus 86 p~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G~ 165 (255)
T PRK12896 86 PGPRVIKDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGY 165 (255)
T ss_pred CCCccCCCCCEEEEEEeEEECcEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeecccccccccccCceEEe-e--ccCcccccccceeeC
Q 021992 266 GVVRQFVGHGIGRVFHADPVVLH-Y--SNYPELYRSSILFLV 304 (304)
Q Consensus 266 ~~~~~~~GHgIG~~~hE~P~i~~-~--~~~~~vLe~GMVf~V 304 (304)
....+++|||||+.+||.|.+.. + ++++.+|++||||+|
T Consensus 166 ~~~~~~~GHgiG~~~he~p~~~~~~~~~~~~~~le~GmV~~i 207 (255)
T PRK12896 166 SVVRDLTGHGVGRSLHEEPSVILTYTDPLPNRLLRPGMTLAV 207 (255)
T ss_pred EeccCcccCCcCcccccCCCccccCCCCCCCCEecCCcEEEE
Confidence 87789999999999999995432 2 456889999999985
No 9
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=1.8e-43 Score=321.75 Aligned_cols=197 Identities=47% Similarity=0.847 Sum_probs=186.8
Q ss_pred CcccchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCC
Q 021992 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD 187 (304)
Q Consensus 108 R~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~ 187 (304)
..|||++||++||+|+++++++++.+.+.++||+||.||++++.+.+.++|+.+.+.++.+|+..+++|.|+..+|+.|+
T Consensus 3 ~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~~~ 82 (252)
T PRK05716 3 ITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIPS 82 (252)
T ss_pred eeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCCCC
Confidence 47999999999999999999999999999999999999999999999999998776667778889999999999999999
Q ss_pred CCCCCCCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCcce
Q 021992 188 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV 267 (304)
Q Consensus 188 ~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~~~ 267 (304)
+++|++||+|.+|+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||++++++++++.|+..
T Consensus 83 ~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~ 162 (252)
T PRK05716 83 DKVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSV 162 (252)
T ss_pred CcccCCCCEEEEEEEEEECCEEEEeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eeeecccccccccccCceEEee--ccCcccccccceeeC
Q 021992 268 VRQFVGHGIGRVFHADPVVLHY--SNYPELYRSSILFLV 304 (304)
Q Consensus 268 ~~~~~GHgIG~~~hE~P~i~~~--~~~~~vLe~GMVf~V 304 (304)
..+++|||||+.+||.|.+.++ ++++.+||+||||+|
T Consensus 163 ~~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gmv~~v 201 (252)
T PRK05716 163 VREYCGHGIGRKFHEEPQIPHYGAPGDGPVLKEGMVFTI 201 (252)
T ss_pred ecCccccccCCccCCCCccCcCCCCCCCCEecCCCEEEE
Confidence 7889999999999999988553 467899999999986
No 10
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=9.1e-43 Score=333.29 Aligned_cols=194 Identities=20% Similarity=0.329 Sum_probs=181.5
Q ss_pred CCCCCcccchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeec
Q 021992 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (304)
Q Consensus 104 ~~~~R~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~H 183 (304)
+..+|+|||++||++||+|+++++++++.+.+.++||+||.||++.++..+.++|+.+ .+|+++|++|.|...+|
T Consensus 121 ~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~G~~~-----~~f~~iv~sG~~~~~ph 195 (361)
T PRK09795 121 PDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEK-----ASFDTIVASGWRGALPH 195 (361)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHCCCCc-----CCCCeEEEEeccccccC
Confidence 5788999999999999999999999999999999999999999999999999999876 35889999999999999
Q ss_pred CCCCCCCCCCCCeeEEeEEEEeccccCCCcceEEecc--CCHH---HHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHH
Q 021992 184 GIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGD--VDDE---ARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQD 258 (304)
Q Consensus 184 g~p~~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~--~~~e---~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~ 258 (304)
+.|++++|++||+|++|+|+.|+||++|++|||++|. ++++ ++++|+.+.++++++++++|||++++||++++++
T Consensus 196 ~~~~~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~ 275 (361)
T PRK09795 196 GKASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARR 275 (361)
T ss_pred CCCCCceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999963 2333 7899999999999999999999999999999999
Q ss_pred hhhhcCcce-eeeecccccccccccCceEEeeccCcccccccceeeC
Q 021992 259 HADRYNYGV-VRQFVGHGIGRVFHADPVVLHYSNYPELYRSSILFLV 304 (304)
Q Consensus 259 ~~~~~G~~~-~~~~~GHgIG~~~hE~P~i~~~~~~~~vLe~GMVf~V 304 (304)
++++.||+. +.|++|||||+++||.|.+. ++++.+|++||||+|
T Consensus 276 ~~~~~g~~~~~~h~~GHgiGl~~he~p~i~--~~~~~~l~~gmv~~i 320 (361)
T PRK09795 276 VITEAGYGDYFGHNTGHAIGIEVHEDPRFS--PRDTTTLQPGMLLTV 320 (361)
T ss_pred HHHHcCCCccCCCCCCccCCccccCCCCcC--CCCCCCcCCCCEEEE
Confidence 999999986 57889999999999999885 678999999999986
No 11
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.6e-42 Score=329.35 Aligned_cols=197 Identities=24% Similarity=0.370 Sum_probs=185.6
Q ss_pred CCCCCCCCcccchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccce
Q 021992 101 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC 180 (304)
Q Consensus 101 ~~~~~~~R~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~ 180 (304)
...+.++|+|||++||+.||+|+++++.++..+.+.++||+||.||.++++..+.+.|+.. .+|+++|++|.|.+
T Consensus 145 ~~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~G~~~-----~sf~~iv~~G~n~a 219 (384)
T COG0006 145 SDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKGGAEG-----PSFDTIVASGENAA 219 (384)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCc-----cCcCcEEecccccc
Confidence 3346789999999999999999999999999999999999999999999999999999764 24899999999999
Q ss_pred eecCCCCCCCCCCCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhh
Q 021992 181 ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA 260 (304)
Q Consensus 181 ~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~ 260 (304)
++|+.|+++.+++||+|+||+|+.|+|||+|+||||.+|+++++++++|+.+.++++++++++|||++++||+.++++++
T Consensus 220 ~pH~~~~~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G~~~~~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i 299 (384)
T COG0006 220 LPHYTPSDRKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVL 299 (384)
T ss_pred CcCCCCCcccccCCCEEEEEeeeEECCccccceeEEecCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCcce-eeeecccccc--cccccCce-EEeeccCcccccccceeeC
Q 021992 261 DRYNYGV-VRQFVGHGIG--RVFHADPV-VLHYSNYPELYRSSILFLV 304 (304)
Q Consensus 261 ~~~G~~~-~~~~~GHgIG--~~~hE~P~-i~~~~~~~~vLe~GMVf~V 304 (304)
.+.||.. +.|.+|||+| +++||.|. +. ++++.+|+|||||++
T Consensus 300 ~~~g~~~~~~h~~GHgvG~~l~vhE~p~~~~--~~~~~~L~~GMv~t~ 345 (384)
T COG0006 300 EKAGYGLYFLHGTGHGVGFVLDVHEHPQYLS--PGSDTTLEPGMVFSI 345 (384)
T ss_pred HhcCCcccccCCccccCCCCcccCcCccccC--CCCCccccCCcEEEe
Confidence 9999876 5677999999 99999994 53 678999999999985
No 12
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=3.6e-40 Score=297.55 Aligned_cols=189 Identities=49% Similarity=0.907 Sum_probs=179.2
Q ss_pred hHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCCCCCCCCCC
Q 021992 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (304)
Q Consensus 116 Ie~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GD 195 (304)
|++||+|+++++++++++.+.++||+||.||++.+.+.+.++|+.+..+++.+|+..+++|.|+..+|+.|++++|++||
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~Gd 80 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGD 80 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCCCCCcccCCCC
Confidence 68999999999999999999999999999999999999999999887777888998899999999999999999999999
Q ss_pred eeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCcceeeeecccc
Q 021992 196 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHG 275 (304)
Q Consensus 196 iV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~~~~~~~~GHg 275 (304)
+|.+|+++.++||++|++|||++|+++++++++++.+.++++++++++|||++++||++++++++++.|+....+++|||
T Consensus 81 ~v~id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~~~~~GHg 160 (238)
T cd01086 81 IVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREFGGHG 160 (238)
T ss_pred EEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcceecCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998778899999
Q ss_pred cccccccCceEEe--eccCcccccccceeeC
Q 021992 276 IGRVFHADPVVLH--YSNYPELYRSSILFLV 304 (304)
Q Consensus 276 IG~~~hE~P~i~~--~~~~~~vLe~GMVf~V 304 (304)
||+.+||.|.+.. .++++.+|++||||+|
T Consensus 161 iG~~~~e~p~~~~~~~~~~~~~le~Gmv~~i 191 (238)
T cd01086 161 IGRKFHEEPQIPNYGRPGTGPKLKPGMVFTI 191 (238)
T ss_pred CCCccccCCCcCCccCCCCCCEecCCCEEEE
Confidence 9999999998752 2467899999999985
No 13
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=5.6e-40 Score=295.62 Aligned_cols=189 Identities=15% Similarity=0.175 Sum_probs=169.4
Q ss_pred hHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCC-CCCCCCCccccccccceeecCCCCCCCCCCC
Q 021992 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSP-LGYGGFPKSVCTSVNECICHGIPDSRALEDG 194 (304)
Q Consensus 116 Ie~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~-l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~G 194 (304)
|++||+|+++++++++++.+.++||+||.||++.+++.+.+.|+...+ ..+.++.+++++|.|+..+|+.|++++|++|
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~~r~l~~G 80 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINTDGAHNPVTNRKVQRG 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccccccCCCCCCcccCCC
Confidence 689999999999999999999999999999999999999999875322 1222333578999999999999999999999
Q ss_pred CeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCcce-eeeecc
Q 021992 195 DTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVG 273 (304)
Q Consensus 195 DiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~~~-~~~~~G 273 (304)
|+|++|+++.++||++|++|||++|+++++++++++++.+|++++++++|||++++||+++++++++++||.. ..+.+|
T Consensus 81 D~v~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~~~~G 160 (228)
T cd01090 81 DILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRTFGYG 160 (228)
T ss_pred CEEEEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999986 356699
Q ss_pred cccccccccCce---EEeeccCcccccccceeeC
Q 021992 274 HGIGRVFHADPV---VLHYSNYPELYRSSILFLV 304 (304)
Q Consensus 274 HgIG~~~hE~P~---i~~~~~~~~vLe~GMVf~V 304 (304)
||||+.+||+|. +....+++.+|++||||++
T Consensus 161 HgiGl~~he~~~~~g~~~~~~~~~~Le~GMV~~i 194 (228)
T cd01090 161 HSFGVLSHYYGREAGLELREDIDTVLEPGMVVSM 194 (228)
T ss_pred cccccccccCCCccccccCCCCCCccCCCCEEEE
Confidence 999999999873 1122467899999999985
No 14
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=3.4e-40 Score=318.75 Aligned_cols=196 Identities=15% Similarity=0.199 Sum_probs=174.7
Q ss_pred CCCCCCCCcccchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHh----CCCCCCCCCCCCCCcccccc
Q 021992 101 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIID----NGAYPSPLGYGGFPKSVCTS 176 (304)
Q Consensus 101 ~~~~~~~R~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~----~G~~ps~l~y~gfp~~v~sg 176 (304)
.+.+.++|+|||++||++||+|+++++++++.+.+.++||+||.||++.+.+.... .|+. +..|.+++++|
T Consensus 149 ~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~~~~g~~-----~~~~~~iv~sG 223 (391)
T TIGR02993 149 TALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIRGVDGFGGD-----YPAIVPLLPSG 223 (391)
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhcccCcCCC-----cCCcccccccC
Confidence 34567899999999999999999999999999999999999999999988655332 1221 12356678899
Q ss_pred ccceeecCCCCCCCCCCCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhH
Q 021992 177 VNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (304)
Q Consensus 177 ~n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai 256 (304)
.|...+|+.|++++|++||+|++|+++.|+||++|++|||++|+++++++++|+++.++++++++++|||++++||++++
T Consensus 224 ~~~a~pH~~~~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG~p~~~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~ 303 (391)
T TIGR02993 224 ADASAPHLTWDDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFLGKPTQAFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAF 303 (391)
T ss_pred ccccCCCCCCCCCcccCCCEEEEEeeeecccCccceeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhcCcceeeeeccccccccccc-----CceEEeeccCcccccccceeeC
Q 021992 257 QDHADRYNYGVVRQFVGHGIGRVFHA-----DPVVLHYSNYPELYRSSILFLV 304 (304)
Q Consensus 257 ~~~~~~~G~~~~~~~~GHgIG~~~hE-----~P~i~~~~~~~~vLe~GMVf~V 304 (304)
+++++++||.. .|++|||||+.+|+ .|.+. ++++.+|++||||+|
T Consensus 304 ~~~~~~~G~~~-~h~~GhgiGl~~~~~~~e~~~~l~--~~~~~~L~~GMv~tv 353 (391)
T TIGR02993 304 FAVLKKYGIHK-DSRTGYPIGLSYPPDWGERTMSLR--PGDNTVLKPGMTFHF 353 (391)
T ss_pred HHHHHHcCCcc-CCCceeeeccCcCCCCCCcccccc--CCCCceecCCCEEEE
Confidence 99999999974 58899999999874 34553 578899999999986
No 15
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=4.2e-40 Score=322.13 Aligned_cols=194 Identities=19% Similarity=0.293 Sum_probs=177.0
Q ss_pred CCCCCcccchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeec
Q 021992 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (304)
Q Consensus 104 ~~~~R~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~H 183 (304)
+.++|+|||++||++||+|++++.+++.++++.++||+||.||++.+...+.++|+.. .+|+++|++|.|.+++|
T Consensus 167 l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~~~-----~~~~~iv~~G~na~~~H 241 (438)
T PRK10879 167 VHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGARY-----PSYNTIVGSGENGCILH 241 (438)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCC-----CCCCcEEEEcCcccccc
Confidence 4568999999999999999999999999999999999999999999999999999864 24888999999999999
Q ss_pred CCCCCCCCCCCCeeEEeEEEEeccccCCCcceEEe-ccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhh-
Q 021992 184 GIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHAD- 261 (304)
Q Consensus 184 g~p~~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~v-G~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~- 261 (304)
+.|++++|++||+|++|+|+.++||++|+||||++ |+++++++++|++++++++++++++|||+++++|++++.+++.
T Consensus 242 ~~~~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~ 321 (438)
T PRK10879 242 YTENESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVS 321 (438)
T ss_pred CCCCccccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 8999999999999999999999999999999999999886653
Q ss_pred -----------------hcCcce-eeeecccccccccccCceEEeeccCcccccccceeeC
Q 021992 262 -----------------RYNYGV-VRQFVGHGIGRVFHADPVVLHYSNYPELYRSSILFLV 304 (304)
Q Consensus 262 -----------------~~G~~~-~~~~~GHgIG~~~hE~P~i~~~~~~~~vLe~GMVf~V 304 (304)
+.++.. +.|.+||+||+++||.|.+. .+++.+|++||||+|
T Consensus 322 ~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~~~--~~~~~~L~~GmV~tv 380 (438)
T PRK10879 322 GLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGVYG--QDRSRILEPGMVLTV 380 (438)
T ss_pred HHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCCcC--CCCCCcCCCCCEEEE
Confidence 334433 57889999999999999763 456789999999986
No 16
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=3.3e-40 Score=311.31 Aligned_cols=197 Identities=19% Similarity=0.310 Sum_probs=176.5
Q ss_pred CCCCCCCCCcccchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc
Q 021992 100 KPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE 179 (304)
Q Consensus 100 ~~~~~~~~R~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~ 179 (304)
..+.+.++|.|||++||+.||+|+++++++++.+.+.++||+||.||++.++..+.+.|... +..| .++.+|.+
T Consensus 85 ~~~~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~~G~tE~el~a~~~~~~~~~g~~~----~~~~-~~i~~G~~- 158 (323)
T PRK15173 85 SSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETH----FSRF-HLISVGAD- 158 (323)
T ss_pred hHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC----CCCC-cEEEECCC-
Confidence 34456789999999999999999999999999999999999999999999988888776533 1123 35666766
Q ss_pred eeecCCCCCCCCCCCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHh
Q 021992 180 CICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDH 259 (304)
Q Consensus 180 ~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~ 259 (304)
..+|+.|+++++++||+|++|+++.|+||++|++|||++|+++++++++|+++.++++++++++|||++++||+++++++
T Consensus 159 ~~~h~~~~~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~ 238 (323)
T PRK15173 159 FSPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEV 238 (323)
T ss_pred CccCCCCCCCccCCCCEEEEEeCccCCCEeeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCcce-eeeeccccccc--ccccCceEEeeccCcccccccceeeC
Q 021992 260 ADRYNYGV-VRQFVGHGIGR--VFHADPVVLHYSNYPELYRSSILFLV 304 (304)
Q Consensus 260 ~~~~G~~~-~~~~~GHgIG~--~~hE~P~i~~~~~~~~vLe~GMVf~V 304 (304)
+++.|+.. ..+++|||||+ .+||+|.+. .+++.+|++||||+|
T Consensus 239 ~~~~G~~~~~~~~~GHGiG~~lg~~E~P~i~--~~~~~~Le~GMV~ti 284 (323)
T PRK15173 239 IKKSGLPNYNRGHLGHGNGVFLGLEESPFVS--THATESFTSGMVLSL 284 (323)
T ss_pred HHHcCCccccCCCCCCcCCCCCCcCCCCCCC--CCCCCccCCCCEEEE
Confidence 99999974 56889999996 889999985 367899999999986
No 17
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=8.3e-40 Score=296.41 Aligned_cols=183 Identities=24% Similarity=0.342 Sum_probs=169.1
Q ss_pred hHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCCCCCCCCCC
Q 021992 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (304)
Q Consensus 116 Ie~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GD 195 (304)
|++||+|+++++++++++.+.++||+||.||++.+++.+.+.|+.+ .|+.++++|.|...+|+.|++++|++||
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~~------~~~~~v~~g~~~~~~H~~~~~~~l~~Gd 74 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARL------AYSYIVAAGSNAAILHYVHNDQPLKDGD 74 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCCc------CCCCeEEECCCccccCCCcCCCcCCCCC
Confidence 6899999999999999999999999999999999999999999883 3788999999999999999999999999
Q ss_pred eeEEeEEEEeccccCCCcceEEe-ccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCc---------
Q 021992 196 TINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY--------- 265 (304)
Q Consensus 196 iV~iDvg~~~~GY~aD~sRT~~v-G~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~--------- 265 (304)
+|++|+++.|+||++|++|||++ |+++++++++++++.++++++++++|||++++||++++++++++.|+
T Consensus 75 ~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~ 154 (243)
T cd01087 75 LVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDV 154 (243)
T ss_pred EEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCch
Confidence 99999999999999999999999 69999999999999999999999999999999999999999987643
Q ss_pred ----------ceeeeecccccccccccCceEEeeccCcccccccceeeC
Q 021992 266 ----------GVVRQFVGHGIGRVFHADPVVLHYSNYPELYRSSILFLV 304 (304)
Q Consensus 266 ----------~~~~~~~GHgIG~~~hE~P~i~~~~~~~~vLe~GMVf~V 304 (304)
..+.|.+|||||+++||.|.+...++++.+|++||||+|
T Consensus 155 ~~~~~~~~~~~~~~h~~GhgiGl~~~e~p~~~~~~~~~~~l~~GMv~~i 203 (243)
T cd01087 155 DEIVESGAYAKFFPHGLGHYLGLDVHDVGGYLRYLRRARPLEPGMVITI 203 (243)
T ss_pred HhhhhhhhhhhhcCCCCccccCcccccCccccccCCCCCCCCCCCEEEE
Confidence 235677999999999999977323578899999999986
No 18
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=8.8e-40 Score=317.25 Aligned_cols=198 Identities=19% Similarity=0.297 Sum_probs=178.3
Q ss_pred CCCCCCCCCCcccchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc
Q 021992 99 QKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVN 178 (304)
Q Consensus 99 ~~~~~~~~~R~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n 178 (304)
+..+.+.++|+|||++||++||+|+++++++++.+.+.++||+||.||++.+++.+.+.|.... ..| .++.+|.+
T Consensus 167 d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~----~~~-~~v~~G~~ 241 (406)
T PRK14575 167 DSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHF----SRF-HLISVGAD 241 (406)
T ss_pred EcHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcC----CcC-ceEEECCC
Confidence 3444567899999999999999999999999999999999999999999999988888776431 112 45667776
Q ss_pred ceeecCCCCCCCCCCCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHH
Q 021992 179 ECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQD 258 (304)
Q Consensus 179 ~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~ 258 (304)
..+|+.|+++++++||+|++|+++.++||++|++|||++|+++++++++|+++.++++++++++|||++++||++++++
T Consensus 242 -~~~h~~~~~~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG~~~~~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~ 320 (406)
T PRK14575 242 -FSPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTME 320 (406)
T ss_pred -cccCCCCCCCcCCCCCEEEEEeceEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 5689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCcce-eeeeccccccc--ccccCceEEeeccCcccccccceeeC
Q 021992 259 HADRYNYGV-VRQFVGHGIGR--VFHADPVVLHYSNYPELYRSSILFLV 304 (304)
Q Consensus 259 ~~~~~G~~~-~~~~~GHgIG~--~~hE~P~i~~~~~~~~vLe~GMVf~V 304 (304)
++++.||.. ..+++|||+|. .+||.|++. .+++.+|++||||+|
T Consensus 321 ~~~~~G~~~~~~~~~GHGiG~~lg~~e~P~i~--~~~~~~Le~GMv~ti 367 (406)
T PRK14575 321 VIKKSGLPNYNRGHLGHGNGVFLGLEESPFVS--THATESFTSGMVLSL 367 (406)
T ss_pred HHHHcCCccccCCCCCCcccCCCCCccCCCCC--CCCCCCcCCCCEEEE
Confidence 999999974 46889999995 899999986 367899999999985
No 19
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=1.9e-39 Score=314.80 Aligned_cols=196 Identities=19% Similarity=0.262 Sum_probs=178.3
Q ss_pred CCCCCCCCcccchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccce
Q 021992 101 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC 180 (304)
Q Consensus 101 ~~~~~~~R~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~ 180 (304)
.+.+.++|+|||++||++||+|++++++++..+.+.++||+||.||++.++..+.+.|... +..| ..|++|.| .
T Consensus 168 ~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~----~~~~-~~v~~G~~-~ 241 (405)
T PRK14576 168 TALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMSFPETN----FSRF-NLISVGDN-F 241 (405)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCc----CCCC-CEEEECCc-c
Confidence 3346789999999999999999999999999999999999999999999999999887531 1123 56788887 5
Q ss_pred eecCCCCCCCCCCCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhh
Q 021992 181 ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA 260 (304)
Q Consensus 181 ~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~ 260 (304)
.+|+.|+++++++||+|++|+++.++||++|++|||++|+++++++++|+++.++++++++++|||++++||++++++++
T Consensus 242 ~~h~~~~~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~ 321 (405)
T PRK14576 242 SPKIIADTTPAKVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVI 321 (405)
T ss_pred cCCCCCCCcccCCCCEEEEEeceeECCEEeeeeEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCcce-eeeecccccc--cccccCceEEeeccCcccccccceeeC
Q 021992 261 DRYNYGV-VRQFVGHGIG--RVFHADPVVLHYSNYPELYRSSILFLV 304 (304)
Q Consensus 261 ~~~G~~~-~~~~~GHgIG--~~~hE~P~i~~~~~~~~vLe~GMVf~V 304 (304)
++.||.. ..+++|||+| +.+||+|.+. ++++.+|++||||+|
T Consensus 322 ~~~G~~~~~~~~~GHgiG~~l~~~e~P~i~--~~~~~~Le~GMv~~v 366 (405)
T PRK14576 322 KTSGLPHYNRGHLGHGDGVFLGLEEVPFVS--TQATETFCPGMVLSL 366 (405)
T ss_pred HHcCCccccCCCCCCCCCCCCCcCcCCCcC--CCCCCccCCCCEEEE
Confidence 9999974 4578999999 7899999874 567899999999986
No 20
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=1.5e-38 Score=280.16 Aligned_cols=182 Identities=26% Similarity=0.495 Sum_probs=172.0
Q ss_pred hHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCCCCCCCCCC
Q 021992 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (304)
Q Consensus 116 Ie~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GD 195 (304)
|++||+|++++++++.++.+.++||+||.||++.+++.+.++|+++ .+|+++|++|.|+..+|+.|++++|++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~-----~~~~~~v~~g~~~~~~h~~~~~~~l~~gd 75 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEG-----PSFDTIVASGPNSALPHGVPSDRKIEEGD 75 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC-----CCCCcEEEECccccccCCCCCCcCcCCCC
Confidence 6899999999999999999999999999999999999999999874 25899999999999999999999999999
Q ss_pred eeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCcce-eeeeccc
Q 021992 196 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVGH 274 (304)
Q Consensus 196 iV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~~~-~~~~~GH 274 (304)
+|++|+++.++||++|++|||++|+++++++++++.+.++++.+++++|||++++||+++++++++++|+.. +.|.+||
T Consensus 76 ~v~id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh 155 (208)
T cd01092 76 LVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGH 155 (208)
T ss_pred EEEEEeeeeECCEeccceeEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999864 4677999
Q ss_pred ccccccccCceEEeeccCcccccccceeeC
Q 021992 275 GIGRVFHADPVVLHYSNYPELYRSSILFLV 304 (304)
Q Consensus 275 gIG~~~hE~P~i~~~~~~~~vLe~GMVf~V 304 (304)
+||+.+||.|.|. ++++.+|++||||+|
T Consensus 156 ~iG~~~~e~p~i~--~~~~~~l~~gmv~~i 183 (208)
T cd01092 156 GVGLEVHEAPYIS--PGSDDVLEEGMVFTI 183 (208)
T ss_pred ccCcccCcCCCcC--CCCCCCcCCCCEEEE
Confidence 9999999999874 578899999999985
No 21
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=100.00 E-value=1.9e-37 Score=298.41 Aligned_cols=196 Identities=19% Similarity=0.326 Sum_probs=174.8
Q ss_pred CcccchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCC----CCCCCCccccccccceeec
Q 021992 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPL----GYGGFPKSVCTSVNECICH 183 (304)
Q Consensus 108 R~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l----~y~gfp~~v~sg~n~~~~H 183 (304)
-.+|+++||++||+|++|++++++.+.+.++||+|+.||+..+++++.+.++. ... ++.+|+...|+++|+++||
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~-~~~~~~~~~~g~afpt~vSvN~~v~H 89 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAK-IFKKEKEMEKGIAFPTCISVNNCVGH 89 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhh-hhcccccccCCCCCCeEEecCCeeeC
Confidence 36999999999999999999999999999999999999999999999887653 221 2345555577889999999
Q ss_pred CCC--C--CCCCCCCCeeEEeEEEEeccccCCCcceEEecc-----CCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhh
Q 021992 184 GIP--D--SRALEDGDTINIDVTVYLNGYHGDTSATFFCGD-----VDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGK 254 (304)
Q Consensus 184 g~p--~--~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~-----~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ 254 (304)
++| + ++.|++||+|+||+|++++||++|++|||++|+ ++++++++++++++|++++++.+|||++++||++
T Consensus 90 ~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ 169 (389)
T TIGR00495 90 FSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQVTE 169 (389)
T ss_pred CCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHH
Confidence 999 2 489999999999999999999999999999995 5678999999999999999999999999999999
Q ss_pred hHHHhhhhcCcceeeeeccccccccccc-CceE-Eeecc------CcccccccceeeC
Q 021992 255 TIQDHADRYNYGVVRQFVGHGIGRVFHA-DPVV-LHYSN------YPELYRSSILFLV 304 (304)
Q Consensus 255 ai~~~~~~~G~~~~~~~~GHgIG~~~hE-~P~i-~~~~~------~~~vLe~GMVf~V 304 (304)
+++++++++||.++.+++|||||..+|+ .|.| .++.. ++..|++||||+|
T Consensus 170 ai~~v~~~~G~~~v~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aI 227 (389)
T TIGR00495 170 AINKVAHSYGCTPVEGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAV 227 (389)
T ss_pred HHHHHHHHcCCeecCCceeecccceeccCCCeeeecCCccccCCCCCCEecCCCEEEE
Confidence 9999999999999999999999999998 8886 44321 3578999999985
No 22
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=1.5e-37 Score=274.35 Aligned_cols=181 Identities=28% Similarity=0.498 Sum_probs=165.4
Q ss_pred HHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHH-HHhCCCCCCCCCCCCCCccccccccceeecCCCCCCCCCCCC
Q 021992 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQM-IIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (304)
Q Consensus 117 e~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~-i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GD 195 (304)
|+||+|+++++++++++.+.++||+||.||++.+.+. +.++|... .+|+.++++|.|...+|+.|++++|++||
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~-----~~~~~~~~~g~~~~~~~~~~~~~~l~~gd 75 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEE-----PAFPPIVGSGPNTDLPHYTPTDRRLQEGD 75 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTE-----ESSESEEEECCCCGETTTBCCSSBESTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCc-----ccCCceEecCCcceecceeccceeeecCC
Confidence 6899999999999999999999999999999999998 67777543 34788999999999999999999999999
Q ss_pred eeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCc-ceeeeeccc
Q 021992 196 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY-GVVRQFVGH 274 (304)
Q Consensus 196 iV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~-~~~~~~~GH 274 (304)
+|.+|+++.++||++|++||+++| ++++++++++.++++++.+++.+|||++++||++++.+.++++|| ..+.+.+||
T Consensus 76 ~v~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~~~~GH 154 (207)
T PF00557_consen 76 IVIIDFGPRYDGYHADIARTFVVG-PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGLEEPYPHGLGH 154 (207)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESS-SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTEGEEBTSSSEE
T ss_pred cceeeccceeeeeEeeeeeEEEEe-ecccccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhcccceeeecccc
Confidence 999999999999999999999999 999999999999999999999999999999999999999999999 557889999
Q ss_pred ccccccccC-ceEEeeccCcccccccceeeC
Q 021992 275 GIGRVFHAD-PVVLHYSNYPELYRSSILFLV 304 (304)
Q Consensus 275 gIG~~~hE~-P~i~~~~~~~~vLe~GMVf~V 304 (304)
|||+.+||. |+|.. .+++.+|++||||+|
T Consensus 155 ~iG~~~~~~~P~i~~-~~~~~~l~~gmv~~i 184 (207)
T PF00557_consen 155 GIGLEFHEPGPNIAR-PGDDTVLEPGMVFAI 184 (207)
T ss_dssp EESSSSSEEEEEESS-TTTSSB--TTBEEEE
T ss_pred cccccccccceeeec-ccccceecCCCceeE
Confidence 999999997 99742 568999999999985
No 23
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=3.5e-37 Score=301.53 Aligned_cols=196 Identities=15% Similarity=0.218 Sum_probs=166.6
Q ss_pred CCCCCCCcccchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCcccccccccee
Q 021992 102 IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECI 181 (304)
Q Consensus 102 ~~~~~~R~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~ 181 (304)
+.+.++|+|||++||++||+|+++++++++.+++.++||+||.||+..+.... ..++.. .+|+++|++|.|+.+
T Consensus 153 ~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~-~~~~~~-----~~y~~iva~G~naa~ 226 (443)
T PRK13607 153 DYLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTAT-GQRDND-----VPYGNIVALNEHAAV 226 (443)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh-CCCCcC-----CCCCcEEEecCcceE
Confidence 34568899999999999999999999999999999999999999998654332 222221 258899999999999
Q ss_pred ecCCCCCC-CCCCCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhh
Q 021992 182 CHGIPDSR-ALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA 260 (304)
Q Consensus 182 ~Hg~p~~r-~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~ 260 (304)
+|+.|+++ ++++||+|++|+|+.++||++|+||||+ |+++++++++|+++.+|++++++++|||++++||+.++.+++
T Consensus 227 ~H~~~~~~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i 305 (443)
T PRK13607 227 LHYTKLDHQAPAEMRSFLIDAGAEYNGYAADITRTYA-AKEDNDFAALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRI 305 (443)
T ss_pred ecCCccCCCCCCCCCEEEEEeeEEECCEEecceEEEe-cCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHH
Confidence 99999875 6899999999999999999999999999 888999999999999999999999999999999999998766
Q ss_pred h----hcCcc----------------eeeeecccccccccccCceEE--------------eeccCcccccccceeeC
Q 021992 261 D----RYNYG----------------VVRQFVGHGIGRVFHADPVVL--------------HYSNYPELYRSSILFLV 304 (304)
Q Consensus 261 ~----~~G~~----------------~~~~~~GHgIG~~~hE~P~i~--------------~~~~~~~vLe~GMVf~V 304 (304)
. +.|+. .+.|.+||+||+++||.+.+. .+-.++.+|++||||+|
T Consensus 306 ~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~Tv 383 (443)
T PRK13607 306 AKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAGFMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTI 383 (443)
T ss_pred HHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCCCcccccccccccccccccccccCCcCCCCcEEEE
Confidence 3 34333 257889999999999985331 11135689999999986
No 24
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=100.00 E-value=1.5e-36 Score=295.36 Aligned_cols=190 Identities=24% Similarity=0.325 Sum_probs=168.2
Q ss_pred CCCcccchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhC----CCCCCCCCCCCCCcccccccccee
Q 021992 106 SGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDN----GAYPSPLGYGGFPKSVCTSVNECI 181 (304)
Q Consensus 106 ~~R~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~----G~~ps~l~y~gfp~~v~sg~n~~~ 181 (304)
+.+..+|++||+.||+|++|++++++.+.+.++||+|+.||+..++..+.+. |+.. ..+||+ |+|.|++.
T Consensus 148 ~~~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~----g~aFPt--~vS~N~~a 221 (470)
T PTZ00053 148 RELEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKC----GWAFPT--GCSLNHCA 221 (470)
T ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcc----cCCCCc--eeecCccc
Confidence 3445689999999999999999999999999999999999999888866543 5432 246887 56799999
Q ss_pred ecCCCC---CCCCCCCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHH
Q 021992 182 CHGIPD---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQD 258 (304)
Q Consensus 182 ~Hg~p~---~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~ 258 (304)
+|++|+ +++|++||+|.||+|++++||++|++|||++| ++++++++++++|++++|++++||++++||++++++
T Consensus 222 aH~tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg---~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqe 298 (470)
T PTZ00053 222 AHYTPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN---PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQE 298 (470)
T ss_pred cCCCCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 999995 78999999999999999999999999999997 688999999999999999999999999999999999
Q ss_pred hhhhcCcc---------eeeeeccccccc-ccccCceEEee-ccCcccccccceeeC
Q 021992 259 HADRYNYG---------VVRQFVGHGIGR-VFHADPVVLHY-SNYPELYRSSILFLV 304 (304)
Q Consensus 259 ~~~~~G~~---------~~~~~~GHgIG~-~~hE~P~i~~~-~~~~~vLe~GMVf~V 304 (304)
+++++||+ .+.|++|||||+ .+|+.|.+++. .++..+|++||||+|
T Consensus 299 vies~G~e~~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP~v~~~~~~~LeeGmVfaI 355 (470)
T PTZ00053 299 VIESYEVEIKGKTYPIKSIRNLNGHSIGPYIIHGGKSVPIVKGGENTRMEEGELFAI 355 (470)
T ss_pred HHHHcCCcccCcccccccccCCcccCCCCccccCCCcCCeeCCCCCCEecCCCEEEE
Confidence 99999974 368999999998 89997666554 467889999999986
No 25
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=1.8e-36 Score=272.24 Aligned_cols=181 Identities=15% Similarity=0.123 Sum_probs=161.6
Q ss_pred HHHhhhhhHHHHHHhcCccccCC--cCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCC---CCCCC
Q 021992 118 CMRVSGRLAAQVLEYAGTLVKPG--ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRALE 192 (304)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~i~pG--vTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~---~r~L~ 192 (304)
.||.+..+ .++++.+.+.++|| +||.||++.+++++...|.++. .+|+++||+|+|+.++|+.|+ +++|+
T Consensus 6 ~~~~~~~~-~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~----~~f~~~v~~g~n~~~~H~~p~~~~~r~l~ 80 (224)
T cd01085 6 HIRDGVAL-VEFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVG----LSFDTISGFGPNGAIVHYSPTEESNRKIS 80 (224)
T ss_pred HHHHHHHH-HHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcC----CCcceEEEecCccCcCCCCcCcccCcccC
Confidence 45665555 59999999999999 9999999999988877765432 258999999999999999999 99999
Q ss_pred CCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhc-CCCchhhHhhhhHHHhhhhcCcceeeee
Q 021992 193 DGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVC-APGMEYKKIGKTIQDHADRYNYGVVRQF 271 (304)
Q Consensus 193 ~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~-rPG~~~~dI~~ai~~~~~~~G~~~~~~~ 271 (304)
+||+|++|+++.++||++|++|||++|+++++++++++.+.+++.++++.+ +||+++++|++++++.+.+.|+. +.|+
T Consensus 81 ~GD~V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~-~~h~ 159 (224)
T cd01085 81 PDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLD-YGHG 159 (224)
T ss_pred CCCEEEEEeCccCCCcccccEEeecCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCC-CCCC
Confidence 999999999999999999999999999999999999999999999999988 59999999999999999999986 5688
Q ss_pred cccccc--cccccCceEEeeccCcccccccceeeC
Q 021992 272 VGHGIG--RVFHADPVVLHYSNYPELYRSSILFLV 304 (304)
Q Consensus 272 ~GHgIG--~~~hE~P~i~~~~~~~~vLe~GMVf~V 304 (304)
+||||| +.+||.|.+....+++.+|++||||+|
T Consensus 160 ~GHgIG~~l~~hE~P~i~~~~~~~~~L~~Gmvfti 194 (224)
T cd01085 160 TGHGVGSFLNVHEGPQSISPAPNNVPLKAGMILSN 194 (224)
T ss_pred CCCCCCCCCcCCCCCCcCCcCCCCCCcCCCCEEEE
Confidence 999999 588999987412467899999999986
No 26
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=1.2e-35 Score=258.92 Aligned_cols=181 Identities=26% Similarity=0.487 Sum_probs=169.9
Q ss_pred hHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCCCCCCCCCC
Q 021992 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (304)
Q Consensus 116 Ie~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GD 195 (304)
|+.||+|+++++++++.+.+.++||+||.||.+.+++.+.++|+++ .|+..+.+|.|...+|+.|+++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~------~~~~~v~~g~~~~~~h~~~~~~~i~~gd 74 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGGYP------AGPTIVGSGARTALPHYRPDDRRLQEGD 74 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcEEEECccccCcCCCCCCCCcCCCC
Confidence 5789999999999999999999999999999999999999999943 3677888888888999999999999999
Q ss_pred eeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCc-ceeeeeccc
Q 021992 196 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY-GVVRQFVGH 274 (304)
Q Consensus 196 iV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~-~~~~~~~GH 274 (304)
+|++|+++.++||++|++|||++|+++++++++++.+.++++.+++.+|||+++.||++++.+++++.|+ ....+++||
T Consensus 75 ~v~~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~~Gh 154 (207)
T cd01066 75 LVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHRTGH 154 (207)
T ss_pred EEEEEeceeECCCccceeceeEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 456888999
Q ss_pred ccccccccCceEEeeccCcccccccceeeC
Q 021992 275 GIGRVFHADPVVLHYSNYPELYRSSILFLV 304 (304)
Q Consensus 275 gIG~~~hE~P~i~~~~~~~~vLe~GMVf~V 304 (304)
+||+.+||.|.+. .+++.+|++||||+|
T Consensus 155 ~iG~~~~e~~~~~--~~~~~~l~~gmv~~i 182 (207)
T cd01066 155 GIGLEIHEPPVLK--AGDDTVLEPGMVFAV 182 (207)
T ss_pred ccCcccCCCCCcC--CCCCCCcCCCCEEEE
Confidence 9999999999853 567899999999985
No 27
>PRK08671 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.2e-35 Score=276.63 Aligned_cols=179 Identities=30% Similarity=0.549 Sum_probs=165.1
Q ss_pred hhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCC---CCCC
Q 021992 115 GIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRAL 191 (304)
Q Consensus 115 EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~---~r~L 191 (304)
+|++||+|++|++++++.+.+.++||+|+.||++.+++.+.+.|+.++ ||..| +.|+..+|+.|. +++|
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~~~a------fp~~v--s~n~~~~H~~p~~~d~~~l 72 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGAKPA------FPCNI--SINEVAAHYTPSPGDERVF 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCccC------CCCEE--eeCCCccCCCCCCCCCccc
Confidence 589999999999999999999999999999999999999999998764 77554 567788999986 6899
Q ss_pred CCCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCcceeeee
Q 021992 192 EDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQF 271 (304)
Q Consensus 192 ~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~~~~~~~ 271 (304)
++||+|++|+|+.++||++|++||+++| ++++++++++.+|++++++.+|||++++||+++++++++++||..+.++
T Consensus 73 ~~GDvV~iD~G~~~dGY~aD~arT~~vG---~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~~~~ 149 (291)
T PRK08671 73 PEGDVVKLDLGAHVDGYIADTAVTVDLG---GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPIRNL 149 (291)
T ss_pred CCCCEEEEEEeEEECCEEEEEEEEEEeC---hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCcccCCC
Confidence 9999999999999999999999999998 4788999999999999999999999999999999999999999988899
Q ss_pred ccccccc-ccccCceEEee-ccCcccccccceeeC
Q 021992 272 VGHGIGR-VFHADPVVLHY-SNYPELYRSSILFLV 304 (304)
Q Consensus 272 ~GHgIG~-~~hE~P~i~~~-~~~~~vLe~GMVf~V 304 (304)
+|||||+ .+||.|.|++. ..++.+|++||||+|
T Consensus 150 ~GHgiG~~~~he~p~ip~~~~~~~~~le~GmV~aI 184 (291)
T PRK08671 150 TGHGLERYELHAGPSIPNYDEGGGVKLEEGDVYAI 184 (291)
T ss_pred cccCcCCCcccCCCccCccCCCCCceeCCCCEEEE
Confidence 9999997 89999988653 457899999999986
No 28
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=100.00 E-value=3.2e-35 Score=274.16 Aligned_cols=181 Identities=28% Similarity=0.444 Sum_probs=165.1
Q ss_pred hhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCC---CC
Q 021992 113 EKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SR 189 (304)
Q Consensus 113 ~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~---~r 189 (304)
-+||++||+|+++++++++.+.+.++||+|+.||++.+++.+.+.|+.++ ||+.+ +.|++.+|+.|. ++
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~a------Fp~~v--s~n~~~~H~~p~~~d~~ 73 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEPA------FPCNI--SINECAAHFTPKAGDKT 73 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCC------CCcce--ecCCEeeCCCCCCCcCc
Confidence 37899999999999999999999999999999999999999999999864 88765 478999999985 67
Q ss_pred CCCCCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCcceee
Q 021992 190 ALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVR 269 (304)
Q Consensus 190 ~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~~~~~ 269 (304)
.|++||+|++|+|+.++||++|++|||++|+ ..+++++++.+|++++++++|||++++||+++++++++++||..+.
T Consensus 74 ~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~---~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i~ 150 (295)
T TIGR00501 74 VFKDGDVVKLDLGAHVDGYIADTAITVDLGD---QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPIS 150 (295)
T ss_pred cCCCCCEEEEEEeEEECCEEEEEEEEEEeCc---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeeec
Confidence 8999999999999999999999999999985 3689999999999999999999999999999999999999999888
Q ss_pred eeccccccc-ccccCceEEee-ccCcccccccceeeC
Q 021992 270 QFVGHGIGR-VFHADPVVLHY-SNYPELYRSSILFLV 304 (304)
Q Consensus 270 ~~~GHgIG~-~~hE~P~i~~~-~~~~~vLe~GMVf~V 304 (304)
+++|||+|. ..|+.+.++.. ..++.+|++||||+|
T Consensus 151 ~~~GHgig~~~~h~g~~ip~i~~~~~~~le~GmV~aI 187 (295)
T TIGR00501 151 NLTGHSMAPYRLHGGKSIPNVKERDTTKLEEGDVVAI 187 (295)
T ss_pred CCCCcceecccccCCCccCeecCCCCCEeCCCCEEEE
Confidence 999999995 78887655433 356789999999985
No 29
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=1.2e-34 Score=269.90 Aligned_cols=178 Identities=29% Similarity=0.518 Sum_probs=163.7
Q ss_pred hHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCC---CCCCC
Q 021992 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRALE 192 (304)
Q Consensus 116 Ie~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~---~r~L~ 192 (304)
+++||+|+++++++++++.+.++||+||.||++.+++.+.+.|+.++ ||. ++|.|+..+|+.|+ +++|+
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~a------fp~--~is~n~~~~H~~p~~~d~~~l~ 72 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGPA------FPV--NLSINECAAHYTPNAGDDTVLK 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC------CCc--eeccCCEeeCCCCCCCCCcccC
Confidence 47899999999999999999999999999999999999999998764 774 46889999999986 48999
Q ss_pred CCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCcceeeeec
Q 021992 193 DGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFV 272 (304)
Q Consensus 193 ~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~~~~~~~~ 272 (304)
+||+|++|+|+.++||++|++|||.+|+ +++++++++++|++++++++|||++++||+++++++++++||..+.+++
T Consensus 73 ~GDvV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~~~~~~~ 149 (291)
T cd01088 73 EGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPIRNLT 149 (291)
T ss_pred CCCEEEEEEEEEECCEEEEEEEEEecCh---hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCEEeecCC
Confidence 9999999999999999999999999985 7889999999999999999999999999999999999999999888999
Q ss_pred cccccc-ccccCceEEee-ccCcccccccceeeC
Q 021992 273 GHGIGR-VFHADPVVLHY-SNYPELYRSSILFLV 304 (304)
Q Consensus 273 GHgIG~-~~hE~P~i~~~-~~~~~vLe~GMVf~V 304 (304)
|||||. .+|+.|.|+.. ..++.+|++||||+|
T Consensus 150 GHgig~~~~h~~~~ip~~~~~~~~~le~gmV~aI 183 (291)
T cd01088 150 GHSIERYRLHAGKSIPNVKGGEGTRLEEGDVYAI 183 (291)
T ss_pred ccCccCccccCCCccCccCCCCCCEeCCCCEEEE
Confidence 999995 78998877554 346889999999986
No 30
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=2.1e-34 Score=261.77 Aligned_cols=186 Identities=14% Similarity=0.231 Sum_probs=165.0
Q ss_pred hHHHHhhhhhHHHHHHhcCc-----cccCC--cCchHHHHHHHHHHHhCCCC-----CCCCCCCCCCccccccccc-eee
Q 021992 116 IECMRVSGRLAAQVLEYAGT-----LVKPG--ITTDEIDKAVHQMIIDNGAY-----PSPLGYGGFPKSVCTSVNE-CIC 182 (304)
Q Consensus 116 Ie~mR~A~~ia~~~l~~a~~-----~i~pG--vTe~EI~~~v~~~i~~~G~~-----ps~l~y~gfp~~v~sg~n~-~~~ 182 (304)
++.+|+|++++..+|..... .|.+| +|+.+|+..++..+.+.+.. +..+. ..|+++|++|.|. ..+
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~~~~~-~~y~~iv~sG~~~~~l~ 79 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDPEQLD-WCYPPIIQSGGNYDLLK 79 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCHHHcC-cccCCeEeECcCcccCC
Confidence 46899999999999976555 79999 99999999999999988754 21122 3599999999999 899
Q ss_pred cCCCCCCCCCCCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhh
Q 021992 183 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADR 262 (304)
Q Consensus 183 Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~ 262 (304)
|+.++++.++.||+|++|+|++|+|||+|++|||++| ++++++++|+++.++++++++++|||++++||++++.+++++
T Consensus 80 h~~~s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~ 158 (243)
T cd01091 80 SSSSSDKLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKK 158 (243)
T ss_pred CCCCCccccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999997 799999999999999999999999999999999999999999
Q ss_pred cCcce---eeeecccccccccccCceEEeeccCcccccccceeeC
Q 021992 263 YNYGV---VRQFVGHGIGRVFHADPVVLHYSNYPELYRSSILFLV 304 (304)
Q Consensus 263 ~G~~~---~~~~~GHgIG~~~hE~P~i~~~~~~~~vLe~GMVf~V 304 (304)
.|.+. +.|.+|||||+++||.|.+. .++++.+|++||||+|
T Consensus 159 ~~~~~~~~~~~~~GHgiGle~hE~~~~l-~~~~~~~L~~GMvf~v 202 (243)
T cd01091 159 KKPELEPNFTKNLGFGIGLEFRESSLII-NAKNDRKLKKGMVFNL 202 (243)
T ss_pred hChhHHHhCcCCcccccCcccccCcccc-CCCCCCCcCCCCEEEE
Confidence 87543 45669999999999988653 3567899999999986
No 31
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=4.6e-33 Score=250.49 Aligned_cols=186 Identities=23% Similarity=0.409 Sum_probs=153.5
Q ss_pred hHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCC--CCC-CCCCCCCCccccccccceeecCCC----CC
Q 021992 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA--YPS-PLGYGGFPKSVCTSVNECICHGIP----DS 188 (304)
Q Consensus 116 Ie~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~--~ps-~l~y~gfp~~v~sg~n~~~~Hg~p----~~ 188 (304)
+++||+|++|++++++.+.+.++||+||.||+..+++.+.+... ++. ..++.+++...|++.|+..+|+.| ++
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~~n~~~~H~~p~~~~~~ 80 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPLKSDAT 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEeccCceeecCCCCCCCCC
Confidence 46899999999999999999999999999999888877776322 222 122233333334557999999996 78
Q ss_pred CCCCCCCeeEEeEEEEeccccCCCcceEEeccCCH-----HHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhc
Q 021992 189 RALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDD-----EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRY 263 (304)
Q Consensus 189 r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~-----e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~ 263 (304)
++|++||+|++|+|+.|+||++|++|||++|++++ +++++++++.++++++++++|||++++||+++++++++++
T Consensus 81 ~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~ 160 (228)
T cd01089 81 YTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDY 160 (228)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHc
Confidence 89999999999999999999999999999998875 8999999999999999999999999999999999999999
Q ss_pred CcceeeeecccccccccccCceEEeeccCcccccccceeeC
Q 021992 264 NYGVVRQFVGHGIGRVFHADPVVLHYSNYPELYRSSILFLV 304 (304)
Q Consensus 264 G~~~~~~~~GHgIG~~~hE~P~i~~~~~~~~vLe~GMVf~V 304 (304)
||.++..+.||++|..++-.|.- ..-..+|++||||++
T Consensus 161 G~~~~~~~~~h~~g~~~~~~~~~---~~~~~~l~~gmvf~~ 198 (228)
T cd01089 161 GCTPVEGVLSHQLKRVVSSGEGK---AKLVECVKHGLLFPY 198 (228)
T ss_pred CCEEecCccccCcCceEecCCCC---ccchhhccCCccccc
Confidence 99888888877777733222210 012678999999985
No 32
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.96 E-value=4.4e-30 Score=240.32 Aligned_cols=193 Identities=18% Similarity=0.240 Sum_probs=177.1
Q ss_pred CCCCCCcccchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceee
Q 021992 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 182 (304)
Q Consensus 103 ~~~~~R~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~ 182 (304)
.+.++|.||||.|+++||+||.|+.+++-..+-.-+++..|..|+++++..+...|+.-. .||+.|+.|.|....
T Consensus 221 li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~rGad~~-----AYpPVVAgG~na~tI 295 (488)
T KOG2414|consen 221 LIERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRRGADRL-----AYPPVVAGGKNANTI 295 (488)
T ss_pred HHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeecCcccc-----ccCCeeecCcccceE
Confidence 356889999999999999999999999999988899999999999999999999999763 599999999999999
Q ss_pred cCCCCCCCCCCCCeeEEeEEEEeccccCCCcceEEe-ccCCHHHHHHHHHhHHHHHHhhhhcCC--CchhhHhhhhHHHh
Q 021992 183 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAP--GMEYKKIGKTIQDH 259 (304)
Q Consensus 183 Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~v-G~~~~e~~~l~~~~~~a~~~ai~~~rP--G~~~~dI~~ai~~~ 259 (304)
|+.-++..+.++|.|++|.|+.++||++|+||||.+ |+.++.|++||+++...++..|+.|+| |.++.+|+....+.
T Consensus 296 HY~~Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~~~s~~L 375 (488)
T KOG2414|consen 296 HYVRNNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFERSNEL 375 (488)
T ss_pred EEeecccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 999999999999999999999999999 99999999877665
Q ss_pred hhh----cCc------------ceeeeecccccccccccCceEEeeccCcccccccceeeC
Q 021992 260 ADR----YNY------------GVVRQFVGHGIGRVFHADPVVLHYSNYPELYRSSILFLV 304 (304)
Q Consensus 260 ~~~----~G~------------~~~~~~~GHgIG~~~hE~P~i~~~~~~~~vLe~GMVf~V 304 (304)
+.+ .|. ..++|++||-+|+++|+-|.+. .+..|+|||||+|
T Consensus 376 l~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLGmDVHD~p~v~----r~~pL~pg~ViTI 432 (488)
T KOG2414|consen 376 LGQELKELGIRKTDREEMIQAEKLCPHHVGHYLGMDVHDCPTVS----RDIPLQPGMVITI 432 (488)
T ss_pred HHHHHHHhCcccchHHHHHhhhhcCCcccchhcCcccccCCCCC----CCccCCCCceEEe
Confidence 543 342 2367999999999999999884 6789999999986
No 33
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=99.95 E-value=1.9e-28 Score=227.38 Aligned_cols=199 Identities=14% Similarity=0.199 Sum_probs=171.8
Q ss_pred CCCCCCCcccchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCcccccccccee
Q 021992 102 IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECI 181 (304)
Q Consensus 102 ~~~~~~R~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~ 181 (304)
|++.+.|.|||+.||+.||.|++|++++..++++.++||+.|.++...+......+|+-.+ .+|..++|+|.|..+
T Consensus 177 p~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh----~sYtcIc~sG~ns~v 252 (492)
T KOG2737|consen 177 PILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRH----LSYTCICASGDNSAV 252 (492)
T ss_pred HHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCccc----cccceeeecCCCcce
Confidence 4677899999999999999999999999999999999999999999999998888876433 358889999999999
Q ss_pred ecC----CCCCCCCCCCCeeEEeEEEEeccccCCCcceEEe-ccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhH
Q 021992 182 CHG----IPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (304)
Q Consensus 182 ~Hg----~p~~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~v-G~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai 256 (304)
.|+ .|+++.+++||.+++|+|+.|++|.+|+|++|.. |+.+++|+.+|+++.++..++++++|||+...|++...
T Consensus 253 LHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~KpGv~W~Dmh~La 332 (492)
T KOG2737|consen 253 LHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKPGVWWVDMHKLA 332 (492)
T ss_pred eeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCccccHHHHH
Confidence 997 8999999999999999999999999999999999 99999999999999999999999999999999998766
Q ss_pred HHhhh----hcCc---------------ceeeeecccccccccccCceEE-eec----------cCcccccccceeeC
Q 021992 257 QDHAD----RYNY---------------GVVRQFVGHGIGRVFHADPVVL-HYS----------NYPELYRSSILFLV 304 (304)
Q Consensus 257 ~~~~~----~~G~---------------~~~~~~~GHgIG~~~hE~P~i~-~~~----------~~~~vLe~GMVf~V 304 (304)
.+++- +.|. ...+|.+||-+|+++|+-.--+ .+. .-...|++|||++|
T Consensus 333 ~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lGlDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e~MviTv 410 (492)
T KOG2737|consen 333 EKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLGLDVHDVGGYPEGVERPDEPGLRSLRTARHLKEGMVITV 410 (492)
T ss_pred HHHHHHHHHhcCceeccHHHHHHhccCeeeccccccccccccccccCCCCCCCCCCCcchhhhhhhhhhhhcCcEEEe
Confidence 66543 3332 1257889999999999732111 111 13467999999986
No 34
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=99.85 E-value=1.8e-21 Score=193.10 Aligned_cols=208 Identities=16% Similarity=0.273 Sum_probs=171.5
Q ss_pred CCCCCCCCCCCCCCCCCCcccchhhhHHHHhhhhhHHHHHHhc-----CccccCC--cCchHHHHHHHHHHHhCC----C
Q 021992 91 PRPPYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYA-----GTLVKPG--ITTDEIDKAVHQMIIDNG----A 159 (304)
Q Consensus 91 ~~p~y~~~~~~~~~~~~R~vKs~~EIe~mR~A~~ia~~~l~~a-----~~~i~pG--vTe~EI~~~v~~~i~~~G----~ 159 (304)
..-.|...++.-.+..+.+||++.||+.+|+|+.++..+|... .+.|..| +|...+...++..+.+.. .
T Consensus 118 ~~~~fn~vDis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l 197 (960)
T KOG1189|consen 118 EAGGFNKVDISLGLSKLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGL 197 (960)
T ss_pred hhcCCceeehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCccc
Confidence 3345555666666888999999999999999999999999833 3345454 688888888888886653 3
Q ss_pred CCCCCCCCCCCcccccccccee-ecCCCCCCCCCCCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHH
Q 021992 160 YPSPLGYGGFPKSVCTSVNECI-CHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHK 238 (304)
Q Consensus 160 ~ps~l~y~gfp~~v~sg~n~~~-~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ 238 (304)
.|..+. .-||+++.+|.+... .....+++.| + +|+..+|++|++||++++|||++ .|+.++++.|+..+.++++
T Consensus 198 ~~~~~d-~cY~PIiqSGg~ydlk~sa~s~~~~L--~-~I~cs~G~RynsYCSNv~RT~Li-dpssemq~nY~fLl~aqe~ 272 (960)
T KOG1189|consen 198 DPDLLD-MCYPPIIQSGGKYDLKPSAVSDDNHL--H-VILCSLGIRYNSYCSNVSRTYLI-DPSSEMQENYEFLLAAQEE 272 (960)
T ss_pred Cccccc-cccChhhhcCCccccccccccccccc--c-eEEeeccchhhhhhccccceeee-cchHHHHHHHHHHHHHHHH
Confidence 332233 248999999988654 3345677778 4 99999999999999999999999 5799999999999999999
Q ss_pred hhhhcCCCchhhHhhhhHHHhhhhcCcceeeee---cccccccccccCceEEeeccCcccccccceeeC
Q 021992 239 AISVCAPGMEYKKIGKTIQDHADRYNYGVVRQF---VGHGIGRVFHADPVVLHYSNYPELYRSSILFLV 304 (304)
Q Consensus 239 ai~~~rPG~~~~dI~~ai~~~~~~~G~~~~~~~---~GHgIG~~~hE~P~i~~~~~~~~vLe~GMVf~V 304 (304)
+++.||||+..++||.++.+++++.+...+..| +|.|||++|.|.-++.+ ..|+.+|++||||.|
T Consensus 273 il~~lrpG~ki~dVY~~~l~~v~k~~Pel~~~~~k~lG~~iGlEFREssl~in-aKnd~~lk~gmvFni 340 (960)
T KOG1189|consen 273 ILKLLRPGTKIGDVYEKALDYVEKNKPELVPNFTKNLGFGIGLEFRESSLVIN-AKNDRVLKKGMVFNI 340 (960)
T ss_pred HHHhhcCCCchhHHHHHHHHHHHhcCcchhhhhhhhcccccceeeeccccccc-ccchhhhccCcEEEE
Confidence 999999999999999999999999998876555 89999999999887744 578899999999975
No 35
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.71 E-value=2.7e-17 Score=161.30 Aligned_cols=196 Identities=14% Similarity=0.170 Sum_probs=161.9
Q ss_pred CCCCCcccchhhhHHHHhhhhhHHHHHHhc----CccccCC--cCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccc-c
Q 021992 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYA----GTLVKPG--ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCT-S 176 (304)
Q Consensus 104 ~~~~R~vKs~~EIe~mR~A~~ia~~~l~~a----~~~i~pG--vTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~s-g 176 (304)
+..++++|+++|++.||.|----..++-+. .+.+.-| +||.+++..++++=.++..+-. ..|+++.++ |
T Consensus 301 i~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmg----lSFeTIS~s~G 376 (606)
T KOG2413|consen 301 ISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMG----LSFETISSSVG 376 (606)
T ss_pred HHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccC----cCcceeeccCC
Confidence 445678999999999998765444444443 3335566 8999999999988777665532 359999866 9
Q ss_pred ccceeecCCCC---CCCCCCCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCC-CchhhHh
Q 021992 177 VNECICHGIPD---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAP-GMEYKKI 252 (304)
Q Consensus 177 ~n~~~~Hg~p~---~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rP-G~~~~dI 252 (304)
+|.++.|+.|. ++.+-+..+.++|-|+.|.-=.+|+|||+.+|+|++++++.|..+....-+...+.-| |+....+
T Consensus 377 ~NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~yT~VLkGhi~la~~vFP~~t~g~~l 456 (606)
T KOG2413|consen 377 PNGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAYTLVLKGHIALARAVFPKGTKGSVL 456 (606)
T ss_pred CCceeeecCCCccccceecCceEEEEccCcccccCccceeEEEecCCCCHHHHHHHHHHHHhhhHhhhcccCCCCCcchh
Confidence 99999999986 4589999999999999988778999999999999999999999999999888887765 7788888
Q ss_pred hhhHHHhhhhcCcceeeeeccccccc--ccccCceEEeec--cCcccccccceeeC
Q 021992 253 GKTIQDHADRYNYGVVRQFVGHGIGR--VFHADPVVLHYS--NYPELYRSSILFLV 304 (304)
Q Consensus 253 ~~ai~~~~~~~G~~~~~~~~GHgIG~--~~hE~P~i~~~~--~~~~vLe~GMVf~V 304 (304)
+..++..+.+.|.. +.|-+|||||- .+||+|....+. ++...|+.||+++.
T Consensus 457 D~laR~~LW~~gLD-y~HgTGHGVG~fLnVhE~P~~is~r~~~~~~~l~ag~~~s~ 511 (606)
T KOG2413|consen 457 DALARSALWKAGLD-YGHGTGHGVGSFLNVHEGPIGIGYRPYSSNFPLQAGMVFSI 511 (606)
T ss_pred HHHHHHHHHhhccc-cCCCCCcccccceEeccCCceeeeeecCCCchhcCceEecc
Confidence 88899999999986 67889999998 779999765554 67888999999973
No 36
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.68 E-value=1.4e-16 Score=147.74 Aligned_cols=193 Identities=19% Similarity=0.374 Sum_probs=153.2
Q ss_pred cccchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCC--CCCC-CCCC--CCCCccccccccceeec
Q 021992 109 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNG--AYPS-PLGY--GGFPKSVCTSVNECICH 183 (304)
Q Consensus 109 ~vKs~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G--~~ps-~l~y--~gfp~~v~sg~n~~~~H 183 (304)
.+-++..+.++|.|++|+..+|..+.+.+.||.+..||+.....++.+.- .|-. -..+ -.||+ |+++|+++||
T Consensus 14 tia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT--~Isvnncv~h 91 (398)
T KOG2776|consen 14 TIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPT--SISVNNCVCH 91 (398)
T ss_pred ccccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccc--eecccceeec
Confidence 56788899999999999999999999999999999999999888876542 2322 1111 23665 5679999999
Q ss_pred CCCC----CCCCCCCCeeEEeEEEEeccccCCCcceEEeccC-----CHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhh
Q 021992 184 GIPD----SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDV-----DDEARNLVKVTKDCLHKAISVCAPGMEYKKIGK 254 (304)
Q Consensus 184 g~p~----~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~-----~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ 254 (304)
+.|- +..|++||+|.||+|+++|||.+.++.|++|+.+ +....+++.++..|.+++++.++||.+-.+|.+
T Consensus 92 ~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~~~~vtG~kADvI~AAh~A~eaa~rllkpgn~n~~vT~ 171 (398)
T KOG2776|consen 92 FSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAPDTPVTGRKADVIAAAHLAAEAALRLLKPGNTNTQVTR 171 (398)
T ss_pred cCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEeccCCCCcccCchhHHHHHHHHHHHHHHHHhCCCCCCchhhH
Confidence 9872 6789999999999999999999999999999853 467889999999999999999999999999999
Q ss_pred hHHHhhhhcCcceeeeeccccccccc-ccCceEEeec-------cCcccccccceee
Q 021992 255 TIQDHADRYNYGVVRQFVGHGIGRVF-HADPVVLHYS-------NYPELYRSSILFL 303 (304)
Q Consensus 255 ai~~~~~~~G~~~~~~~~GHgIG~~~-hE~P~i~~~~-------~~~~vLe~GMVf~ 303 (304)
++.+.+.++++..+....-|-.=..+ ...+.|.-.+ .+++.++++.|+.
T Consensus 172 ~i~k~aas~~c~pVegmlshql~~~~idGeKtIi~n~sdqq~~~~e~~~fe~~Evya 228 (398)
T KOG2776|consen 172 AIVKTAASYGCKPVEGMLSHQLKQHVIDGEKTIIQNPSDQQKKEHEKTEFEEHEVYA 228 (398)
T ss_pred HHHHHHHHhCCcccccchhHHHHhhhhcCCceEecCcchhhhccccccccccceeEE
Confidence 99999999998876666666554433 2334443222 1345566666553
No 37
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=99.67 E-value=2.5e-16 Score=143.06 Aligned_cols=185 Identities=22% Similarity=0.368 Sum_probs=155.1
Q ss_pred cchhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHH----hCCCCCCCCCCCCCCccccccccceeecCCC
Q 021992 111 HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII----DNGAYPSPLGYGGFPKSVCTSVNECICHGIP 186 (304)
Q Consensus 111 Ks~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~----~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p 186 (304)
-..+...-+|+|+++.+++-.++...|+||||..||++.++...+ +.|.... -+||+. .|.|.+..|+.|
T Consensus 80 ~~~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~aG----i~FPtG--~SlN~cAAHyTp 153 (397)
T KOG2775|consen 80 TESDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNAG----IGFPTG--CSLNHCAAHYTP 153 (397)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccccc----ccCCCc--ccccchhhhcCC
Confidence 345667889999999999999999999999999999999876543 4443322 468876 468999999998
Q ss_pred C---CCCCCCCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhc
Q 021992 187 D---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRY 263 (304)
Q Consensus 187 ~---~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~ 263 (304)
+ ..+|+.+|+..||+|.+.+|-.-|++.|+.+ ++....|..+++++...+|+...-.++.+||+++|+++++.+
T Consensus 154 NaGd~tVLqydDV~KiDfGthi~GrIiDsAFTv~F---~p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiqEVmeSy 230 (397)
T KOG2775|consen 154 NAGDKTVLKYDDVMKIDFGTHIDGRIIDSAFTVAF---NPKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQEVMESY 230 (397)
T ss_pred CCCCceeeeecceEEEeccccccCeEeeeeeEEee---CccccHHHHHHHHHHhhhhhhcCceeeehhhhHHHHHHhhhe
Confidence 5 4689999999999999999999999999987 667888999999999999999999999999999999999997
Q ss_pred Ccc-------e--eeeeccccccc-ccccCceEEee-ccCcccccccceeeC
Q 021992 264 NYG-------V--VRQFVGHGIGR-VFHADPVVLHY-SNYPELYRSSILFLV 304 (304)
Q Consensus 264 G~~-------~--~~~~~GHgIG~-~~hE~P~i~~~-~~~~~vLe~GMVf~V 304 (304)
-.+ + ++++.||+|+. .+|..-.|+.- ..+++.+|+|.+|.|
T Consensus 231 EvEi~Gk~~~VKpIrnLnGHSI~~yrIH~gksVPiVkgge~trmee~e~yAI 282 (397)
T KOG2775|consen 231 EVEINGKTYQVKPIRNLNGHSIAQYRIHGGKSVPIVKGGEQTRMEEGEIYAI 282 (397)
T ss_pred EEEeCCceecceeccccCCCcccceEeecCcccceecCCcceeecCCeeEEE
Confidence 533 2 67889999998 56776555432 467889999998864
No 38
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.61 E-value=1.5e-15 Score=148.83 Aligned_cols=205 Identities=16% Similarity=0.190 Sum_probs=157.0
Q ss_pred CCCCCCCCCCCCcccchhhhHHHHhhhhhHHHHHHhcCccc---cCC---cCchHHHHHHHHHHHhCCC------CCCCC
Q 021992 97 NSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLV---KPG---ITTDEIDKAVHQMIIDNGA------YPSPL 164 (304)
Q Consensus 97 ~~~~~~~~~~~R~vKs~~EIe~mR~A~~ia~~~l~~a~~~i---~pG---vTe~EI~~~v~~~i~~~G~------~ps~l 164 (304)
..++.-.+.++-.+|+.+||+.+|.+++.....|....+.+ .-| +|...+...+...+-+-.. .-+.+
T Consensus 157 ~~DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l~~~ 236 (1001)
T COG5406 157 ASDVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKLGDI 236 (1001)
T ss_pred hhhhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCcccccc
Confidence 33444456788899999999999999999999998543332 222 4666666666554422211 00011
Q ss_pred CC----CCCCcccccccccee-ecCCCCCCCCCCCCeeEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHh
Q 021992 165 GY----GGFPKSVCTSVNECI-CHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKA 239 (304)
Q Consensus 165 ~y----~gfp~~v~sg~n~~~-~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~a 239 (304)
++ +-|.+++.+|..--+ +..+.+++.+ -||.|...+|.+|+|||++++||+++ +|+.|+++-|+.++.++...
T Consensus 237 ~~d~lew~ytpiiqsg~~~Dl~psa~s~~~~l-~gd~vl~s~GiRYn~YCSn~~RT~l~-dp~~e~~~Ny~fl~~lQk~i 314 (1001)
T COG5406 237 DLDQLEWCYTPIIQSGGSIDLTPSAFSFPMEL-TGDVVLLSIGIRYNGYCSNMSRTILT-DPDSEQQKNYEFLYMLQKYI 314 (1001)
T ss_pred chhhhhhhcchhhccCceeecccccccCchhh-cCceEEEEeeeeeccccccccceEEe-CCchHhhhhHHHHHHHHHHH
Confidence 11 237788888865332 3334445555 48999999999999999999999999 58999999999999999999
Q ss_pred hhhcCCCchhhHhhhhHHHhhhhcCcceeeee---cccccccccccCceEEeeccCcccccccceeeC
Q 021992 240 ISVCAPGMEYKKIGKTIQDHADRYNYGVVRQF---VGHGIGRVFHADPVVLHYSNYPELYRSSILFLV 304 (304)
Q Consensus 240 i~~~rPG~~~~dI~~ai~~~~~~~G~~~~~~~---~GHgIG~~~hE~P~i~~~~~~~~vLe~GMVf~V 304 (304)
+..||||...++||..+.+++.+.|....++| +|-+||+++.+.-.+.+ ..+..+|+.||+|.+
T Consensus 315 ~~~~rpG~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~igiefR~s~~~~n-vkn~r~lq~g~~fni 381 (1001)
T COG5406 315 LGLVRPGTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIGIEFRSSQKPFN-VKNGRVLQAGCIFNI 381 (1001)
T ss_pred HhhcCCCCCchhHHHHHHHHHHhcCCccCchHhhhhhhhcccccccccccee-ccCCceeccccEEEE
Confidence 99999999999999999999999998877777 79999999988776654 356699999999974
No 39
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=97.32 E-value=0.0011 Score=57.26 Aligned_cols=102 Identities=20% Similarity=0.229 Sum_probs=74.0
Q ss_pred HHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCCCCCCCCCCe
Q 021992 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDT 196 (304)
Q Consensus 117 e~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDi 196 (304)
+.++++.+.+.++++.+.+.++||++..||..++.+.+.++|........ ....+.....+...-....+.+|++|.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~--~Gh~iG~~~~e~~~~~~~~~~~l~~gmv 179 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHR--TGHGIGLEIHEPPVLKAGDDTVLEPGMV 179 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCC--CccccCcccCCCCCcCCCCCCCcCCCCE
Confidence 57889999999999999999999999999999999999999874211111 1112222221111111124678999999
Q ss_pred eEEeEEEEec-cccCCCcceEEecc
Q 021992 197 INIDVTVYLN-GYHGDTSATFFCGD 220 (304)
Q Consensus 197 V~iDvg~~~~-GY~aD~sRT~~vG~ 220 (304)
+.++.+.... ++..-+..|++|.+
T Consensus 180 ~~iep~~~~~~~~g~~~ed~v~vt~ 204 (207)
T cd01066 180 FAVEPGLYLPGGGGVRIEDTVLVTE 204 (207)
T ss_pred EEECCEEEECCCcEEEeeeEEEEeC
Confidence 9999999877 57788888888853
No 40
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=96.92 E-value=0.0046 Score=54.00 Aligned_cols=101 Identities=22% Similarity=0.264 Sum_probs=68.6
Q ss_pred HHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCCCCCCCCCCe
Q 021992 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDT 196 (304)
Q Consensus 117 e~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDi 196 (304)
+.+|++.+.+.++++.+.+.++||++..||.+.+++.+.++|..+......|+ .+.....+...-...++++|++|.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh--~iG~~~~e~p~i~~~~~~~l~~gmv 180 (208)
T cd01092 103 DELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGH--GVGLEVHEAPYISPGSDDVLEEGMV 180 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCcc--ccCcccCcCCCcCCCCCCCcCCCCE
Confidence 46678899999999999999999999999999999999999874321111111 1111111110001124688999999
Q ss_pred eEEeEEEEecccc-CCCcceEEec
Q 021992 197 INIDVTVYLNGYH-GDTSATFFCG 219 (304)
Q Consensus 197 V~iDvg~~~~GY~-aD~sRT~~vG 219 (304)
+.|+.+.+..|+. .-+..|++|.
T Consensus 181 ~~iep~~~~~~~~g~~~ed~v~vt 204 (208)
T cd01092 181 FTIEPGIYIPGKGGVRIEDDVLVT 204 (208)
T ss_pred EEECCeEEecCCCEEEeeeEEEEC
Confidence 9999998775553 3356777763
No 41
>PRK05716 methionine aminopeptidase; Validated
Probab=96.84 E-value=0.0044 Score=56.14 Aligned_cols=100 Identities=18% Similarity=0.191 Sum_probs=69.0
Q ss_pred HHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccce--eecC-C-CCCCCCCC
Q 021992 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHG-I-PDSRALED 193 (304)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~--~~Hg-~-p~~r~L~~ 193 (304)
..|++.+.+.++.+.+.+.++||++-.||.+++++.+.++|..+. .++.|+. +.....+. +.++ . .++.+|++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~~-~~~~GHg--iG~~~~e~p~~~~~~~~~~~~~le~ 195 (252)
T PRK05716 119 EDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSVV-REYCGHG--IGRKFHEEPQIPHYGAPGDGPVLKE 195 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeee-cCccccc--cCCccCCCCccCcCCCCCCCCEecC
Confidence 456777888888888899999999999999999999999987652 2222322 22222211 1111 1 34678999
Q ss_pred CCeeEEeEEEEe------------------ccccCCCcceEEecc
Q 021992 194 GDTINIDVTVYL------------------NGYHGDTSATFFCGD 220 (304)
Q Consensus 194 GDiV~iDvg~~~------------------~GY~aD~sRT~~vG~ 220 (304)
|.++.|+.+.+. +++..-+..|++|.+
T Consensus 196 Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~ 240 (252)
T PRK05716 196 GMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTE 240 (252)
T ss_pred CCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcC
Confidence 999999988764 234455677888853
No 42
>PLN03158 methionine aminopeptidase; Provisional
Probab=96.63 E-value=0.0044 Score=60.47 Aligned_cols=96 Identities=10% Similarity=0.090 Sum_probs=66.0
Q ss_pred cccCCCcceEEeccCC--HHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCc-ceeeeecccc--cccccc
Q 021992 207 GYHGDTSATFFCGDVD--DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY-GVVRQFVGHG--IGRVFH 281 (304)
Q Consensus 207 GY~aD~sRT~~vG~~~--~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~-~~~~~~~GHg--IG~~~h 281 (304)
..+.++.++..+..+. +..+++.+.+.++++++.++++||++-.||..++++.+.++|. ....++.+.. +....
T Consensus 126 ~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~- 204 (396)
T PLN03158 126 EPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSV- 204 (396)
T ss_pred ccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeecc-
Confidence 3456778888887655 5677888999999999999999999999999999999877763 2111111111 11111
Q ss_pred cCceEEeeccCcccccccceeeC
Q 021992 282 ADPVVLHYSNYPELYRSSILFLV 304 (304)
Q Consensus 282 E~P~i~~~~~~~~vLe~GMVf~V 304 (304)
...+.|+..++.+|++|+++.|
T Consensus 205 -N~~i~Hgip~~r~L~~GDiV~i 226 (396)
T PLN03158 205 -NEVICHGIPDARKLEDGDIVNV 226 (396)
T ss_pred -cccccCCCCCCccCCCCCEEEE
Confidence 1234454446788999998764
No 43
>PRK15173 peptidase; Provisional
Probab=96.62 E-value=0.0089 Score=56.68 Aligned_cols=103 Identities=14% Similarity=0.122 Sum_probs=70.3
Q ss_pred HHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCCCCCCCCCCe
Q 021992 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDT 196 (304)
Q Consensus 117 e~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDi 196 (304)
+..|++.+++.++.+.+.+.++||++-.||...+.+.+.+.|.......+.|+...+..|.++.-.-...++.+|++|.+
T Consensus 202 ~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~E~P~i~~~~~~~Le~GMV 281 (323)
T PRK15173 202 EITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEESPFVSTHATESFTSGMV 281 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCcCCCCCCcCCCCCCCCCCCCccCCCCE
Confidence 34577888999999999999999999999999999999998864322122122111112333321111124678999999
Q ss_pred eEEeEEEEecccc-CCCcceEEec
Q 021992 197 INIDVTVYLNGYH-GDTSATFFCG 219 (304)
Q Consensus 197 V~iDvg~~~~GY~-aD~sRT~~vG 219 (304)
+.|..+.+..|.. .-+..|++|.
T Consensus 282 ~tiEPgiy~~g~ggvriEDtvlVT 305 (323)
T PRK15173 282 LSLETPYYGYNLGSIMIEDMILIN 305 (323)
T ss_pred EEECCEEEcCCCcEEEEeeEEEEc
Confidence 9999988754432 4577888884
No 44
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=96.61 E-value=0.0087 Score=54.15 Aligned_cols=85 Identities=20% Similarity=0.119 Sum_probs=60.0
Q ss_pred HHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccce--eecC--CCCCCCCCC
Q 021992 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHG--IPDSRALED 193 (304)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~--~~Hg--~p~~r~L~~ 193 (304)
..|++.+++.++++.+.+.++||+|-.||..++.+.+.+.|..+. ..+.|+ .+.....+. +..+ ..++.+|++
T Consensus 117 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~-~~~~GH--giG~~~~e~p~i~~~~~~~~~~~l~~ 193 (247)
T TIGR00500 117 EAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV-REYCGH--GIGRKFHEEPQIPNYGKKFTNVRLKE 193 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-cCccCC--ccCcccCCCCccCCcCcCCCCCEecC
Confidence 356777788888888889999999999999999999999987552 222222 222222221 1211 124678999
Q ss_pred CCeeEEeEEEEe
Q 021992 194 GDTINIDVTVYL 205 (304)
Q Consensus 194 GDiV~iDvg~~~ 205 (304)
|.++.|+.+.+.
T Consensus 194 gmv~~iEp~i~~ 205 (247)
T TIGR00500 194 GMVFTIEPMVNT 205 (247)
T ss_pred CCEEEEeeEEEc
Confidence 999999988765
No 45
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.52 E-value=0.012 Score=52.79 Aligned_cols=87 Identities=21% Similarity=0.204 Sum_probs=60.1
Q ss_pred HHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceee-cCCC-CCCCCCCCC
Q 021992 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC-HGIP-DSRALEDGD 195 (304)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~-Hg~p-~~r~L~~GD 195 (304)
.+|++.+.+.++.+.+.+.++||++-.|+.+++++.+.+.|.... ..+.|+...+.......+. +..+ ++.+|++|.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~-~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gm 187 (238)
T cd01086 109 EAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVV-REFGGHGIGRKFHEEPQIPNYGRPGTGPKLKPGM 187 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCccee-cCccccCCCCccccCCCcCCccCCCCCCEecCCC
Confidence 456788888888889999999999999999999999999987542 2222222211111111111 2223 368899999
Q ss_pred eeEEeEEEEe
Q 021992 196 TINIDVTVYL 205 (304)
Q Consensus 196 iV~iDvg~~~ 205 (304)
++.++.+.++
T Consensus 188 v~~iep~i~~ 197 (238)
T cd01086 188 VFTIEPMINL 197 (238)
T ss_pred EEEEeeEEEC
Confidence 9999998875
No 46
>PRK12897 methionine aminopeptidase; Reviewed
Probab=96.48 E-value=0.011 Score=53.62 Aligned_cols=100 Identities=17% Similarity=0.159 Sum_probs=68.9
Q ss_pred HHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccce--eecCC--CCCCCCCC
Q 021992 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHGI--PDSRALED 193 (304)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~--~~Hg~--p~~r~L~~ 193 (304)
..|++.+++.++++.+.+.++||++..|++.++.+.+.+.|.... .++.|+ .|....++. +.+.. .+..+|++
T Consensus 118 ~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~~-~~~~GH--giGl~~hE~P~i~~~~~~~~~~~l~~ 194 (248)
T PRK12897 118 EAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSVA-RDFTGH--GIGKEIHEEPAIFHFGKQGQGPELQE 194 (248)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCccC-CCeEEC--ccCCcccCCCccCCCCCCCCCCCcCC
Confidence 356677888889999999999999999999999999999986532 222222 232332221 12211 23468999
Q ss_pred CCeeEEeEEEEe-----------------cc-ccCCCcceEEecc
Q 021992 194 GDTINIDVTVYL-----------------NG-YHGDTSATFFCGD 220 (304)
Q Consensus 194 GDiV~iDvg~~~-----------------~G-Y~aD~sRT~~vG~ 220 (304)
|.++.+.-+.+. +| +..-+..|++|.+
T Consensus 195 Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~ 239 (248)
T PRK12897 195 GMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITK 239 (248)
T ss_pred CCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeC
Confidence 999999988872 34 4557778888753
No 47
>PRK14575 putative peptidase; Provisional
Probab=96.39 E-value=0.013 Score=57.29 Aligned_cols=103 Identities=13% Similarity=0.112 Sum_probs=69.6
Q ss_pred HHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCCCCCCCCCCee
Q 021992 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTI 197 (304)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDiV 197 (304)
..|++.+++.++.+.+.+.++||+|-.||++.+.+.+.+.|.......+.|+......|.++.-.-..-++.+|++|.++
T Consensus 286 ~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~e~P~i~~~~~~~Le~GMv~ 365 (406)
T PRK14575 286 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEESPFVSTHATESFTSGMVL 365 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCcccCCCCCccCCCCCCCCCCCcCCCCEE
Confidence 45677888889999999999999999999999999999988643221111111111123332110011245789999999
Q ss_pred EEeEEEEecccc-CCCcceEEecc
Q 021992 198 NIDVTVYLNGYH-GDTSATFFCGD 220 (304)
Q Consensus 198 ~iDvg~~~~GY~-aD~sRT~~vG~ 220 (304)
.+..+.+..|.. .-+..|++|.+
T Consensus 366 tiEpgiy~~g~gGvriEDtvlVT~ 389 (406)
T PRK14575 366 SLETPYYGYNLGSIMIEDMILINK 389 (406)
T ss_pred EECCeeecCCCcEEEEEeEEEEcC
Confidence 999998865533 46788888843
No 48
>PRK14576 putative endopeptidase; Provisional
Probab=96.31 E-value=0.015 Score=56.80 Aligned_cols=103 Identities=13% Similarity=0.064 Sum_probs=69.6
Q ss_pred HHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCCCCCCCCCCe
Q 021992 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDT 196 (304)
Q Consensus 117 e~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDi 196 (304)
+..+++.+++.++.+.+.+.++||++-.||+.++.+.+.+.|.........|+......|..+.-.....++.+|++|.+
T Consensus 284 ~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHgiG~~l~~~e~P~i~~~~~~~Le~GMv 363 (405)
T PRK14576 284 KLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHYNRGHLGHGDGVFLGLEEVPFVSTQATETFCPGMV 363 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCCCCCCCCcCcCCCcCCCCCCccCCCCE
Confidence 34677888899999999999999999999999999999999864322222222211113333321111124678999999
Q ss_pred eEEeEEEEecc-ccCCCcceEEec
Q 021992 197 INIDVTVYLNG-YHGDTSATFFCG 219 (304)
Q Consensus 197 V~iDvg~~~~G-Y~aD~sRT~~vG 219 (304)
+.++.+.+..| .-.-+..|++|.
T Consensus 364 ~~vEp~~y~~g~ggvriEDtvlVT 387 (405)
T PRK14576 364 LSLETPYYGIGVGSIMLEDMILIT 387 (405)
T ss_pred EEECCceeecCCCEEEEeeEEEEC
Confidence 99997766544 223367888884
No 49
>PRK12896 methionine aminopeptidase; Reviewed
Probab=96.28 E-value=0.015 Score=52.75 Aligned_cols=92 Identities=12% Similarity=0.151 Sum_probs=62.1
Q ss_pred CCcceEEeccCCH--HHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCcceeee-ecccc--cccccccCce
Q 021992 211 DTSATFFCGDVDD--EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQ-FVGHG--IGRVFHADPV 285 (304)
Q Consensus 211 D~sRT~~vG~~~~--e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~~~~~~-~~GHg--IG~~~hE~P~ 285 (304)
.-.|++.+-++.+ ..+++.+.+.+++.++++.++||++-.||...+...+.+.|...... ..+.. +.... ...
T Consensus 3 ~~~~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~--n~~ 80 (255)
T PRK12896 3 QEGRGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISV--NEE 80 (255)
T ss_pred CcCCceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecC--CCe
Confidence 3468888855443 56788888889999999999999999999999999999988752110 11111 11111 122
Q ss_pred EEeeccCcccccccceeeC
Q 021992 286 VLHYSNYPELYRSSILFLV 304 (304)
Q Consensus 286 i~~~~~~~~vLe~GMVf~V 304 (304)
+.|+..++.+|++|.++.|
T Consensus 81 ~~h~~p~~~~l~~Gd~v~i 99 (255)
T PRK12896 81 VAHGIPGPRVIKDGDLVNI 99 (255)
T ss_pred eEecCCCCccCCCCCEEEE
Confidence 3455456688999988753
No 50
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=96.23 E-value=0.021 Score=51.39 Aligned_cols=100 Identities=15% Similarity=0.127 Sum_probs=69.4
Q ss_pred HHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecC------CCCCCCC
Q 021992 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG------IPDSRAL 191 (304)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg------~p~~r~L 191 (304)
..|++.+++.++++.+.+.++||++-.||++++.+.+.++|...... .++...+....++. .|+ ..++.+|
T Consensus 110 ~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~--~~~GHgiGl~~he~-~~~~g~~~~~~~~~~L 186 (228)
T cd01090 110 AHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRT--FGYGHSFGVLSHYY-GREAGLELREDIDTVL 186 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccc--cccCcccccccccC-CCccccccCCCCCCcc
Confidence 46788889999999999999999999999999999999998654211 11222232222222 111 1235889
Q ss_pred CCCCeeEEeEEEEec----cc-cCCCcceEEecc
Q 021992 192 EDGDTINIDVTVYLN----GY-HGDTSATFFCGD 220 (304)
Q Consensus 192 ~~GDiV~iDvg~~~~----GY-~aD~sRT~~vG~ 220 (304)
++|.++.++-+.++. |. -.-+..|++|.+
T Consensus 187 e~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~ 220 (228)
T cd01090 187 EPGMVVSMEPMIMLPEGQPGAGGYREHDILVINE 220 (228)
T ss_pred CCCCEEEECCEEeecccCCCCcEEEeeeEEEECC
Confidence 999999999998863 22 223678888853
No 51
>PRK12318 methionine aminopeptidase; Provisional
Probab=96.21 E-value=0.02 Score=53.49 Aligned_cols=87 Identities=18% Similarity=0.191 Sum_probs=61.1
Q ss_pred HHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccce--eecCCC-CCCCCCCC
Q 021992 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHGIP-DSRALEDG 194 (304)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~--~~Hg~p-~~r~L~~G 194 (304)
.+|+..+++.++++.+.+.++||++..||+.++.+.+.++|.... ..+.|+ .|....++. +.+..+ ++.+|++|
T Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~~~-~~~~GH--gIGl~~hE~P~i~~~~~~~~~~L~~G 235 (291)
T PRK12318 159 IKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFSVV-DQFVGH--GVGIKFHENPYVPHHRNSSKIPLAPG 235 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccC-CCcccC--CcCccccCCCcccCcCCCCCCEeCCC
Confidence 457788889999999999999999999999999999999887532 112222 222222221 112112 34679999
Q ss_pred CeeEEeEEEEecc
Q 021992 195 DTINIDVTVYLNG 207 (304)
Q Consensus 195 DiV~iDvg~~~~G 207 (304)
.++.|.-+.+..+
T Consensus 236 MV~~iEP~i~~~~ 248 (291)
T PRK12318 236 MIFTIEPMINVGK 248 (291)
T ss_pred CEEEECCEEEcCC
Confidence 9999998887654
No 52
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=96.21 E-value=0.016 Score=56.26 Aligned_cols=98 Identities=16% Similarity=0.227 Sum_probs=71.1
Q ss_pred HHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCcccccccccee----ecCCC-CCCCCC
Q 021992 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECI----CHGIP-DSRALE 192 (304)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~----~Hg~p-~~r~L~ 192 (304)
.++++.+++.++.+.+.+.++||+|-.||++++.+.+.++|.... ...|++.. .+..... +.-.+ ++.+|+
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~~--h~~GhgiG--l~~~~~~~e~~~~l~~~~~~~L~ 346 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHKD--SRTGYPIG--LSYPPDWGERTMSLRPGDNTVLK 346 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccC--CCceeeec--cCcCCCCCCccccccCCCCceec
Confidence 467788899999999999999999999999999999999886531 12233221 1111000 00012 357899
Q ss_pred CCCeeEEeEEEEeccccCCCcceEEec
Q 021992 193 DGDTINIDVTVYLNGYHGDTSATFFCG 219 (304)
Q Consensus 193 ~GDiV~iDvg~~~~GY~aD~sRT~~vG 219 (304)
+|-++.+.-+.+..|+..-+..|++|.
T Consensus 347 ~GMv~tvEpgiy~~~~Gvried~v~VT 373 (391)
T TIGR02993 347 PGMTFHFMTGLWMEDWGLEITESILIT 373 (391)
T ss_pred CCCEEEEcceeEeCCCCeEEeeEEEEC
Confidence 999999999999888766778889884
No 53
>PRK09795 aminopeptidase; Provisional
Probab=96.12 E-value=0.025 Score=54.32 Aligned_cols=105 Identities=15% Similarity=0.150 Sum_probs=72.9
Q ss_pred hhhhHHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCCCCCCC
Q 021992 113 EKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALE 192 (304)
Q Consensus 113 ~~EIe~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~ 192 (304)
+++-+.++++.+++.++.+.+.+.++||++-.||++.+.+.+.+.|........ ....|....++.-.....++.+|+
T Consensus 236 ~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~~~~~h~--~GHgiGl~~he~p~i~~~~~~~l~ 313 (361)
T PRK09795 236 SAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFGHN--TGHAIGIEVHEDPRFSPRDTTTLQ 313 (361)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCccCCCC--CCccCCccccCCCCcCCCCCCCcC
Confidence 444456888999999999999999999999999999999999998864321111 112222222221111112468899
Q ss_pred CCCeeEEeEEEEecccc-CCCcceEEec
Q 021992 193 DGDTINIDVTVYLNGYH-GDTSATFFCG 219 (304)
Q Consensus 193 ~GDiV~iDvg~~~~GY~-aD~sRT~~vG 219 (304)
+|.++.|+.+.+..|+. .-+..|++|.
T Consensus 314 ~gmv~~iEpgiy~~~~~gvriEd~v~vt 341 (361)
T PRK09795 314 PGMLLTVEPGIYLPGQGGVRIEDVVLVT 341 (361)
T ss_pred CCCEEEECCEEEeCCCCEEEEeeEEEEC
Confidence 99999999999876643 3457788874
No 54
>PRK08671 methionine aminopeptidase; Provisional
Probab=96.07 E-value=0.048 Score=50.97 Aligned_cols=95 Identities=20% Similarity=0.194 Sum_probs=69.3
Q ss_pred HHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecC--------CCCCC
Q 021992 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG--------IPDSR 189 (304)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg--------~p~~r 189 (304)
..+++.+.+.++++.+.+.++||++..||.+.+++.+.+.|..+. .+..|+. .|.+ ..|. ..++.
T Consensus 102 ~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~-~~~~GHg----iG~~--~~he~p~ip~~~~~~~~ 174 (291)
T PRK08671 102 KYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPI-RNLTGHG----LERY--ELHAGPSIPNYDEGGGV 174 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccc-CCCcccC----cCCC--cccCCCccCccCCCCCc
Confidence 456788888889999999999999999999999999999998663 2222211 1111 1121 12467
Q ss_pred CCCCCCeeEEeEEEE-eccccCCCcceEEec
Q 021992 190 ALEDGDTINIDVTVY-LNGYHGDTSATFFCG 219 (304)
Q Consensus 190 ~L~~GDiV~iDvg~~-~~GY~aD~sRT~~vG 219 (304)
+|++|+++.|+..+. -.|+..|-.+|-+..
T Consensus 175 ~le~GmV~aIEp~~t~G~G~v~~~~~~~iy~ 205 (291)
T PRK08671 175 KLEEGDVYAIEPFATDGEGKVVEGPEVEIYS 205 (291)
T ss_pred eeCCCCEEEEcceEECCCCeEecCCceEEEe
Confidence 899999999998765 467777877777664
No 55
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.01 E-value=0.051 Score=50.77 Aligned_cols=95 Identities=21% Similarity=0.173 Sum_probs=68.8
Q ss_pred HHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecC--------CCCCC
Q 021992 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG--------IPDSR 189 (304)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg--------~p~~r 189 (304)
..++..+.+.++++.+.+.++||++-.||.+.+++.+.++|..+. .++.|+. .|.+ ..|+ ..++.
T Consensus 101 ~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~~~-~~~~GHg----ig~~--~~h~~~~ip~~~~~~~~ 173 (291)
T cd01088 101 KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPI-RNLTGHS----IERY--RLHAGKSIPNVKGGEGT 173 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCEEe-ecCCccC----ccCc--cccCCCccCccCCCCCC
Confidence 456778889999999999999999999999999999999998762 2222221 1211 1121 12467
Q ss_pred CCCCCCeeEEeEEEE-eccccCCCcceEEec
Q 021992 190 ALEDGDTINIDVTVY-LNGYHGDTSATFFCG 219 (304)
Q Consensus 190 ~L~~GDiV~iDvg~~-~~GY~aD~sRT~~vG 219 (304)
+|++|+++.|+.... -.|+..+-.+|-...
T Consensus 174 ~le~gmV~aIEp~~s~G~G~v~~~~~~~iy~ 204 (291)
T cd01088 174 RLEEGDVYAIEPFATTGKGYVHDGPECSIYM 204 (291)
T ss_pred EeCCCCEEEEceeEECCCCeeecCCceEEEE
Confidence 899999999998765 467777766666664
No 56
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=95.87 E-value=0.018 Score=52.46 Aligned_cols=104 Identities=14% Similarity=0.100 Sum_probs=69.0
Q ss_pred HHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeec-CCCCCCCCCCCC
Q 021992 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH-GIPDSRALEDGD 195 (304)
Q Consensus 117 e~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~H-g~p~~r~L~~GD 195 (304)
+..|++.+++.++.+++.+.++||++-.||...+.+.+.+.+..-...-.++....|....++.... ..-++++|++|.
T Consensus 119 ~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~~~~~~~~~~~~GHgiGle~hE~~~~l~~~~~~~L~~GM 198 (243)
T cd01091 119 SEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKKPELEPNFTKNLGFGIGLEFRESSLIINAKNDRKLKKGM 198 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhChhHHHhCcCCcccccCcccccCccccCCCCCCCcCCCC
Confidence 4567788899999999999999999999999999999988752111000011111222222221111 112468899999
Q ss_pred eeEEeEEEE-ec----------cccCCCcceEEecc
Q 021992 196 TINIDVTVY-LN----------GYHGDTSATFFCGD 220 (304)
Q Consensus 196 iV~iDvg~~-~~----------GY~aD~sRT~~vG~ 220 (304)
++.+..|.+ +. .|-.-++.|++|.+
T Consensus 199 vf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt~ 234 (243)
T cd01091 199 VFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVTE 234 (243)
T ss_pred EEEEeCCcccccCccccCccCCeeEEEEEEEEEEcC
Confidence 999999986 32 45666888888853
No 57
>PRK07281 methionine aminopeptidase; Reviewed
Probab=95.85 E-value=0.028 Score=52.47 Aligned_cols=85 Identities=12% Similarity=0.076 Sum_probs=60.0
Q ss_pred HHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccce--eecC-CC-CCCCCCC
Q 021992 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHG-IP-DSRALED 193 (304)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~--~~Hg-~p-~~r~L~~ 193 (304)
..|++.+++.++++.+.+.++||++-.||++++.+.+.++|... ..++.|+ .|....++. +.+. .+ ++.+|++
T Consensus 149 ~~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~-~~~~~GH--GIGl~~hE~P~i~~~~~~~~~~~Le~ 225 (286)
T PRK07281 149 EVKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRGYGV-VRDLVGH--GVGPTMHEEPMVPNYGTAGRGLRLRE 225 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-CCCeeee--eCCCccCCCCcCCCcccCCCCCEECC
Confidence 46788999999999999999999999999999999998887643 1122222 222222221 1221 12 3568999
Q ss_pred CCeeEEeEEEEe
Q 021992 194 GDTINIDVTVYL 205 (304)
Q Consensus 194 GDiV~iDvg~~~ 205 (304)
|.++.|.-+.+.
T Consensus 226 GMV~tiEPgiy~ 237 (286)
T PRK07281 226 GMVLTIEPMINT 237 (286)
T ss_pred CCEEEECCeeEc
Confidence 999999999875
No 58
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=95.84 E-value=0.028 Score=50.72 Aligned_cols=102 Identities=16% Similarity=0.125 Sum_probs=66.8
Q ss_pred HHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCC----CCC------------CCCCCCCCCcccccccccee
Q 021992 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNG----AYP------------SPLGYGGFPKSVCTSVNECI 181 (304)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G----~~p------------s~l~y~gfp~~v~sg~n~~~ 181 (304)
..++..+.+.++++.+.+.++||++-.||.+++.+.+.+++ ..+ ..+..+++...+.....+..
T Consensus 104 ~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e~p 183 (243)
T cd01087 104 EQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHYLGLDVHDVG 183 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCCCCccccCcccccCc
Confidence 46677888889999999999999999999999988887653 211 01100112222222222221
Q ss_pred ec--CCCCCCCCCCCCeeEEeEEEEecc-----------ccCCCcceEEec
Q 021992 182 CH--GIPDSRALEDGDTINIDVTVYLNG-----------YHGDTSATFFCG 219 (304)
Q Consensus 182 ~H--g~p~~r~L~~GDiV~iDvg~~~~G-----------Y~aD~sRT~~vG 219 (304)
.. ...++.+|++|-++.+..+.+..| +..-+..|++|.
T Consensus 184 ~~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~Vt 234 (243)
T cd01087 184 GYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLVT 234 (243)
T ss_pred cccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEEc
Confidence 11 112467899999999999998765 455567788874
No 59
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=95.78 E-value=0.026 Score=49.33 Aligned_cols=97 Identities=24% Similarity=0.314 Sum_probs=62.9
Q ss_pred HHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCC-CCCCCCCCCCccccccccceeecC--CCCCCCCCCCC
Q 021992 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAY-PSPLGYGGFPKSVCTSVNECICHG--IPDSRALEDGD 195 (304)
Q Consensus 119 mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~-ps~l~y~gfp~~v~sg~n~~~~Hg--~p~~r~L~~GD 195 (304)
.+++.+.+.++++.+++.++||+|..||.+++.+.+.++|.. +.+. .+..++.....+..+.- .-++.+|++|-
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~~---~~GH~iG~~~~~~~P~i~~~~~~~~l~~gm 180 (207)
T PF00557_consen 104 QRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGLEEPYPH---GLGHGIGLEFHEPGPNIARPGDDTVLEPGM 180 (207)
T ss_dssp HHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTEGEEBTS---SSEEEESSSSSEEEEEESSTTTSSB--TTB
T ss_pred ccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhcccceeee---cccccccccccccceeeecccccceecCCC
Confidence 777888888889999999999999999999999999999862 2111 12222222222111221 12578999999
Q ss_pred eeEEeEEEE-eccc-cCCCcceEEe
Q 021992 196 TINIDVTVY-LNGY-HGDTSATFFC 218 (304)
Q Consensus 196 iV~iDvg~~-~~GY-~aD~sRT~~v 218 (304)
++.++.+.. ..|. ..-+..|++|
T Consensus 181 v~~iep~~~~~~~~~g~~~ed~v~V 205 (207)
T PF00557_consen 181 VFAIEPGLYFIPGWGGVRFEDTVLV 205 (207)
T ss_dssp EEEEEEEEEEETTSEEEEEBEEEEE
T ss_pred ceeEeeeEEccCCCcEEEEEEEEEE
Confidence 999999876 4444 4445555554
No 60
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=95.38 E-value=0.043 Score=50.32 Aligned_cols=80 Identities=13% Similarity=0.177 Sum_probs=55.4
Q ss_pred HHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCcce-eeeecc--cccccccccCceEEee-ccCcccccc
Q 021992 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVG--HGIGRVFHADPVVLHY-SNYPELYRS 298 (304)
Q Consensus 223 ~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~~~-~~~~~G--HgIG~~~hE~P~i~~~-~~~~~vLe~ 298 (304)
+..+++-+.+.++++.+.+.++||++..||.+.+++++++.|.-. ..++-| -.+.+.+.| .+.|+ ++++.+|++
T Consensus 12 ek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe--~v~HgiP~d~~vlk~ 89 (255)
T COG0024 12 EKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNE--VVAHGIPGDKKVLKE 89 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhh--eeeecCCCCCcccCC
Confidence 356777788889999999999999999999999999999865432 111112 333333333 23333 347889999
Q ss_pred cceeeC
Q 021992 299 SILFLV 304 (304)
Q Consensus 299 GMVf~V 304 (304)
|.++.|
T Consensus 90 GDiv~I 95 (255)
T COG0024 90 GDIVKI 95 (255)
T ss_pred CCEEEE
Confidence 988764
No 61
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=95.00 E-value=0.056 Score=48.46 Aligned_cols=99 Identities=18% Similarity=0.143 Sum_probs=71.1
Q ss_pred HHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCC-CCCCCCccccccccceeecCCCCCCCCCCCC
Q 021992 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPL-GYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (304)
Q Consensus 117 e~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l-~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GD 195 (304)
...+++.+.+.++++.+.+.++||++-.||+.++.+.+.+.|+.+-.- ..+++...+.++.+.. .-...|++|.
T Consensus 120 ~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~G~~~~~~~~~h~~g~~~~~~~~~~-----~~~~~l~~gm 194 (228)
T cd01089 120 GKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDYGCTPVEGVLSHQLKRVVSSGEGKA-----KLVECVKHGL 194 (228)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCEEecCccccCcCceEecCCCCc-----cchhhccCCc
Confidence 467788889999999999999999999999999999999999532110 0011111222222111 0146799999
Q ss_pred eeEEeEEEEecc-ccCCCcceEEecc
Q 021992 196 TINIDVTVYLNG-YHGDTSATFFCGD 220 (304)
Q Consensus 196 iV~iDvg~~~~G-Y~aD~sRT~~vG~ 220 (304)
++.+.......| +..-+.-|++|.+
T Consensus 195 vf~~ep~~~~~g~~~~~~~~Tv~vt~ 220 (228)
T cd01089 195 LFPYPVLYEKEGEVVAQFKLTVLLTP 220 (228)
T ss_pred ccccceeEccCCCeEEEEEEEEEEcC
Confidence 999999998766 6778889999853
No 62
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=94.97 E-value=0.091 Score=49.22 Aligned_cols=93 Identities=25% Similarity=0.307 Sum_probs=67.8
Q ss_pred HHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecC--------CCCCCC
Q 021992 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG--------IPDSRA 190 (304)
Q Consensus 119 mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg--------~p~~r~ 190 (304)
.++..+.+.++++.+.+.++||++-.||.+++++.+.++|..+. .++.|+. + |. ...|+ ..++.+
T Consensus 106 ~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i-~~~~GHg--i--g~--~~~h~g~~ip~i~~~~~~~ 178 (295)
T TIGR00501 106 YDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPI-SNLTGHS--M--AP--YRLHGGKSIPNVKERDTTK 178 (295)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeee-cCCCCcc--e--ec--ccccCCCccCeecCCCCCE
Confidence 47788888899999999999999999999999999999998762 2332222 1 10 11222 123578
Q ss_pred CCCCCeeEEeEEEE-eccccCCCcceEEe
Q 021992 191 LEDGDTINIDVTVY-LNGYHGDTSATFFC 218 (304)
Q Consensus 191 L~~GDiV~iDvg~~-~~GY~aD~sRT~~v 218 (304)
|++|+++.|+.... -.|+..|..+|-+.
T Consensus 179 le~GmV~aIEP~~~~G~G~v~~~~~~~iy 207 (295)
T TIGR00501 179 LEEGDVVAIEPFATDGVGYVTDGGEVSIY 207 (295)
T ss_pred eCCCCEEEEceeEECCcCeEecCCCeEEE
Confidence 99999999998665 36787777766554
No 63
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=94.43 E-value=0.13 Score=50.07 Aligned_cols=102 Identities=21% Similarity=0.198 Sum_probs=67.2
Q ss_pred HHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCC-CCCCCCCccccccccceeecCCC------CCC
Q 021992 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSP-LGYGGFPKSVCTSVNECICHGIP------DSR 189 (304)
Q Consensus 117 e~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~-l~y~gfp~~v~sg~n~~~~Hg~p------~~r 189 (304)
...+++...+..+++.+.+.++||++-.||..++++.+.++|+.+.. +..+++...+--|....+.+..+ ++.
T Consensus 138 ~~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ai~~v~~~~G~~~v~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~ 217 (389)
T TIGR00495 138 GRKADVIAAAHLAAEAALRLVKPGNTNTQVTEAINKVAHSYGCTPVEGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTA 217 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCeecCCceeecccceeccCCCeeeecCCccccCCCCCC
Confidence 34566777888899999999999999999999999999999986531 11122222222222222334322 245
Q ss_pred CCCCCCeeEEeEEEE-eccccCCCc-ceEEe
Q 021992 190 ALEDGDTINIDVTVY-LNGYHGDTS-ATFFC 218 (304)
Q Consensus 190 ~L~~GDiV~iDvg~~-~~GY~aD~s-RT~~v 218 (304)
.+++|++..||..+. -.|+.-+.. ||-+.
T Consensus 218 ~le~gev~aIEp~vs~G~g~v~~~~~~~tiy 248 (389)
T TIGR00495 218 EFEENEVYAVDILVSTGEGKAKDADQRTTIY 248 (389)
T ss_pred EecCCCEEEEeeeecCCCceEEECCCeeEEE
Confidence 799999999999886 355555444 34433
No 64
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=93.81 E-value=0.16 Score=47.38 Aligned_cols=42 Identities=14% Similarity=0.363 Sum_probs=37.4
Q ss_pred HHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcC
Q 021992 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYN 264 (304)
Q Consensus 223 ~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G 264 (304)
+.+|+..+.++++++.|-.++|||++-.||++++.+.+-+.|
T Consensus 123 e~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg 164 (369)
T KOG2738|consen 123 EGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERG 164 (369)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcC
Confidence 345677788899999999999999999999999999988876
No 65
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=93.48 E-value=0.24 Score=47.88 Aligned_cols=100 Identities=24% Similarity=0.240 Sum_probs=70.6
Q ss_pred HHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCcccc--ccccceeecCCC-CCCCCCCCC
Q 021992 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNECICHGIP-DSRALEDGD 195 (304)
Q Consensus 119 mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~--sg~n~~~~Hg~p-~~r~L~~GD 195 (304)
.|+..+++.++.+++.+.++||+|-.|+++++.+.+.+.|...... +++...+. ..+.+.-..-.+ ++.+|++|-
T Consensus 264 ~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~~~--h~~GHgvG~~l~vhE~p~~~~~~~~~~L~~GM 341 (384)
T COG0006 264 QREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLYFL--HGTGHGVGFVLDVHEHPQYLSPGSDTTLEPGM 341 (384)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCccccc--CCccccCCCCcccCcCccccCCCCCccccCCc
Confidence 4577889999999999999999999999999999999976533211 12222222 222221101112 467899999
Q ss_pred eeEEeEEEEe-ccccCCCcceEEecc
Q 021992 196 TINIDVTVYL-NGYHGDTSATFFCGD 220 (304)
Q Consensus 196 iV~iDvg~~~-~GY~aD~sRT~~vG~ 220 (304)
++.++-+.++ +.+-.-+..+++|.+
T Consensus 342 v~t~Epg~y~~g~~GirIEd~vlVte 367 (384)
T COG0006 342 VFSIEPGIYIPGGGGVRIEDTVLVTE 367 (384)
T ss_pred EEEeccccccCCCceEEEEEEEEEcC
Confidence 9999999775 557778889999864
No 66
>PRK10879 proline aminopeptidase P II; Provisional
Probab=93.08 E-value=0.37 Score=47.65 Aligned_cols=101 Identities=19% Similarity=0.230 Sum_probs=63.2
Q ss_pred HHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHH----hCCCCCCC-------CCC-CCCCccc----cccccceee
Q 021992 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII----DNGAYPSP-------LGY-GGFPKSV----CTSVNECIC 182 (304)
Q Consensus 119 mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~----~~G~~ps~-------l~y-~gfp~~v----~sg~n~~~~ 182 (304)
.|+..+++.++.+.+.+.++||++-.+|..++.+.+. +.|..+.. -++ ..|+..+ ...+++.-.
T Consensus 284 q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~ 363 (438)
T PRK10879 284 QREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGV 363 (438)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCC
Confidence 4677788888888999999999999999988876543 33432210 000 0122222 222222111
Q ss_pred cCCCCCCCCCCCCeeEEeEEEEec----------cccCCCcceEEec
Q 021992 183 HGIPDSRALEDGDTINIDVTVYLN----------GYHGDTSATFFCG 219 (304)
Q Consensus 183 Hg~p~~r~L~~GDiV~iDvg~~~~----------GY~aD~sRT~~vG 219 (304)
....++++|++|-++.|.-+.+.. |+..-+..|++|.
T Consensus 364 ~~~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT 410 (438)
T PRK10879 364 YGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVIT 410 (438)
T ss_pred cCCCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEEC
Confidence 111246799999999999999863 4555678888884
No 67
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=92.63 E-value=0.42 Score=47.67 Aligned_cols=96 Identities=15% Similarity=0.177 Sum_probs=67.8
Q ss_pred HHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCC---CC----C-CCCCCCCccccccccceeecC---CC
Q 021992 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAY---PS----P-LGYGGFPKSVCTSVNECICHG---IP 186 (304)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~---ps----~-l~y~gfp~~v~sg~n~~~~Hg---~p 186 (304)
..++..+++.++++.+++.++||++-.||++++++.+.++|.. .. + .+..|. . .|. ...|+ +|
T Consensus 264 ~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevies~G~e~~Gk~f~~k~I~nltGH--g--IG~--y~iHe~k~iP 337 (470)
T PTZ00053 264 KYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIESYEVEIKGKTYPIKSIRNLNGH--S--IGP--YIIHGGKSVP 337 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCcccccccccCCccc--C--CCC--ccccCCCcCC
Confidence 4677888889999999999999999999999999999999863 00 0 111111 1 111 12333 22
Q ss_pred -----CCCCCCCCCeeEEeEEEE-eccccCCCcceEEec
Q 021992 187 -----DSRALEDGDTINIDVTVY-LNGYHGDTSATFFCG 219 (304)
Q Consensus 187 -----~~r~L~~GDiV~iDvg~~-~~GY~aD~sRT~~vG 219 (304)
+..+|++|+++.|+..+. -.||..|-.++-...
T Consensus 338 ~v~~~~~~~LeeGmVfaIEPf~stG~G~v~~~~~~siY~ 376 (470)
T PTZ00053 338 IVKGGENTRMEEGELFAIETFASTGRGYVNEDLECSHYM 376 (470)
T ss_pred eeCCCCCCEecCCCEEEEcceeeCCCCeEecCCCceeee
Confidence 356899999999998776 578888866666553
No 68
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=87.64 E-value=3 Score=37.32 Aligned_cols=96 Identities=17% Similarity=0.121 Sum_probs=59.1
Q ss_pred HhhhhhHHHHHHhcCccc-cCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCcccc--ccccce--eecCCCCCCCCCCC
Q 021992 120 RVSGRLAAQVLEYAGTLV-KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNEC--ICHGIPDSRALEDG 194 (304)
Q Consensus 120 R~A~~ia~~~l~~a~~~i-~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~--sg~n~~--~~Hg~p~~r~L~~G 194 (304)
|++..++.++...+.+.+ +||++-.+|++.+.+.+.+.|.+.. ...|+ .|. ...++. +.+...++++|++|
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~~~--h~~GH--gIG~~l~~hE~P~i~~~~~~~~~L~~G 189 (224)
T cd01085 114 KRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDYG--HGTGH--GVGSFLNVHEGPQSISPAPNNVPLKAG 189 (224)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCCCC--CCCCC--CCCCCCcCCCCCCcCCcCCCCCCcCCC
Confidence 334444455555555555 5899999999999999988876310 01111 222 122221 11111245789999
Q ss_pred CeeEEeEEEEecc-ccCCCcceEEec
Q 021992 195 DTINIDVTVYLNG-YHGDTSATFFCG 219 (304)
Q Consensus 195 DiV~iDvg~~~~G-Y~aD~sRT~~vG 219 (304)
.++.|.-+.+..| +..-+..|++|.
T Consensus 190 mvftiEP~iy~~g~~gvried~v~Vt 215 (224)
T cd01085 190 MILSNEPGYYKEGKYGIRIENLVLVV 215 (224)
T ss_pred CEEEECCEeEeCCCeEEEeeEEEEEe
Confidence 9999999998654 445577888874
No 69
>PRK13607 proline dipeptidase; Provisional
Probab=87.19 E-value=2.1 Score=42.51 Aligned_cols=89 Identities=18% Similarity=0.191 Sum_probs=56.5
Q ss_pred HHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHH----HhCCCCCC-------CCCC--CCCCcc----cccccccee
Q 021992 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMI----IDNGAYPS-------PLGY--GGFPKS----VCTSVNECI 181 (304)
Q Consensus 119 mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i----~~~G~~ps-------~l~y--~gfp~~----v~sg~n~~~ 181 (304)
.++..+++.++.+++.+.++||++-.||..++++.+ .+.|.... .-++ ..|+.. +...+++.-
T Consensus 270 ~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~ 349 (443)
T PRK13607 270 FAALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVA 349 (443)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCC
Confidence 346788889999999999999999999998887655 44444321 0000 012222 222233221
Q ss_pred ec----------------CCCCCCCCCCCCeeEEeEEEEecc
Q 021992 182 CH----------------GIPDSRALEDGDTINIDVTVYLNG 207 (304)
Q Consensus 182 ~H----------------g~p~~r~L~~GDiV~iDvg~~~~G 207 (304)
.+ ..-++++|++|.++.|.-|+++.+
T Consensus 350 ~~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEPGiY~~~ 391 (443)
T PRK13607 350 GFMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEPGLYFID 391 (443)
T ss_pred CcccccccccccccccccccccCCcCCCCcEEEECCeeeeCh
Confidence 00 011357899999999999998865
No 70
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=77.15 E-value=4.4 Score=38.14 Aligned_cols=77 Identities=14% Similarity=0.208 Sum_probs=50.5
Q ss_pred HHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhh----hcCcceeeeeccccccccc-ccCceEEeeccCccccc
Q 021992 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHAD----RYNYGVVRQFVGHGIGRVF-HADPVVLHYSNYPELYR 297 (304)
Q Consensus 223 ~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~----~~G~~~~~~~~GHgIG~~~-hE~P~i~~~~~~~~vLe 297 (304)
.+.++..++-+.+...+.+.+|||++.-||.+.++...+ +.|.. ..+|...|... |..-.....+++.++|+
T Consensus 86 ~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~---aGi~FPtG~SlN~cAAHyTpNaGd~tVLq 162 (397)
T KOG2775|consen 86 QDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLN---AGIGFPTGCSLNHCAAHYTPNAGDKTVLK 162 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccc---ccccCCCcccccchhhhcCCCCCCceeee
Confidence 456777888888889999999999999999888776555 45543 23444455433 22221111245678888
Q ss_pred cccee
Q 021992 298 SSILF 302 (304)
Q Consensus 298 ~GMVf 302 (304)
.+.|.
T Consensus 163 ydDV~ 167 (397)
T KOG2775|consen 163 YDDVM 167 (397)
T ss_pred ecceE
Confidence 77765
No 71
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=76.04 E-value=6 Score=41.52 Aligned_cols=98 Identities=19% Similarity=0.247 Sum_probs=68.9
Q ss_pred HHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc----c-eeecCCCCCCCCCC
Q 021992 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVN----E-CICHGIPDSRALED 193 (304)
Q Consensus 119 mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n----~-~~~Hg~p~~r~L~~ 193 (304)
|.++...--.+-+++.+.++||.+-.+|...+...+.+.+-.-. ..|.+.+.+|.- + .+.-+.-++++|++
T Consensus 259 mq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~Pel~----~~~~k~lG~~iGlEFREssl~inaKnd~~lk~ 334 (960)
T KOG1189|consen 259 MQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKPELV----PNFTKNLGFGIGLEFRESSLVINAKNDRVLKK 334 (960)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCcchh----hhhhhhcccccceeeecccccccccchhhhcc
Confidence 56676777777778888999999999999999999988864322 123443332221 1 11112346799999
Q ss_pred CCeeEEeEEEE-------eccccCCCcceEEecc
Q 021992 194 GDTINIDVTVY-------LNGYHGDTSATFFCGD 220 (304)
Q Consensus 194 GDiV~iDvg~~-------~~GY~aD~sRT~~vG~ 220 (304)
|.+.+|.+|.. -+-|.--++-|++||+
T Consensus 335 gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv~e 368 (960)
T KOG1189|consen 335 GMVFNISLGFSNLTNPESKNSYALLLSDTVLVGE 368 (960)
T ss_pred CcEEEEeeccccccCcccccchhhhccceeeecC
Confidence 99999999873 2457777899999985
No 72
>cd01666 TGS_DRG_C TGS_DRG_C: DRG (developmentally regulated GTP-binding protein) represents a family of GTP-binding proteins that includes two members, DRG1 and DRG2. DRG1 and DRG2 have a C-terminal TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) with a predominantly beta-sheet structure. The function of TGS is unknown but its presence in two types of regulatory proteins (the DRG GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=62.57 E-value=14 Score=27.45 Aligned_cols=52 Identities=17% Similarity=0.304 Sum_probs=32.2
Q ss_pred ccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccc-eeecCCCCCCCCCCCCeeEE
Q 021992 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE-CICHGIPDSRALEDGDTINI 199 (304)
Q Consensus 137 i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~-~~~Hg~p~~r~L~~GDiV~i 199 (304)
++.|.|-.+++..+|..+.+.=.+. +-.|... ....-.+-+.+|++||+|.|
T Consensus 21 L~~GaTV~D~a~~iH~di~~~f~~A-----------~v~g~s~~~~gq~Vgl~~~L~d~DvVeI 73 (75)
T cd01666 21 LRRGSTVEDVCNKIHKDLVKQFKYA-----------LVWGSSVKHSPQRVGLDHVLEDEDVVQI 73 (75)
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCee-----------EEeccCCcCCCeECCCCCEecCCCEEEE
Confidence 4668999999999997776542221 1111110 01123466789999999986
No 73
>PRK01490 tig trigger factor; Provisional
Probab=59.83 E-value=30 Score=34.03 Aligned_cols=76 Identities=16% Similarity=0.228 Sum_probs=49.2
Q ss_pred CCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCCCCCCCCCCeeEEeEEEEeccccCCC----cc
Q 021992 139 PGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDT----SA 214 (304)
Q Consensus 139 pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~----sR 214 (304)
.-+|+.+|+..+.+....++-+. +.+++++.||.|.+|+....+|-.-+. ..
T Consensus 130 ~~vtde~vd~~i~~l~~~~a~~~------------------------~~~~~~~~gD~V~vd~~~~~~g~~~~~~~~~~~ 185 (435)
T PRK01490 130 VEVTDEDVDEELERLRKQFATLV------------------------PVERPAENGDRVTIDFVGSIDGEEFEGGKAEDF 185 (435)
T ss_pred CCCCHHHHHHHHHHHHHhCCccc------------------------cccccCCCCCEEEEEEEEEECCEECcCCCCCce
Confidence 45789999999988777664431 223678999999999999887744332 25
Q ss_pred eEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCc
Q 021992 215 TFFCGDVDDEARNLVKVTKDCLHKAISVCAPGM 247 (304)
Q Consensus 215 T~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~ 247 (304)
+|.+|.. ......+.++--+++|-
T Consensus 186 ~~~lg~~---------~~~~~fee~L~G~k~Ge 209 (435)
T PRK01490 186 SLELGSG---------RFIPGFEEQLVGMKAGE 209 (435)
T ss_pred EEEEcCC---------CcchhHHHHhCCCCCCC
Confidence 6666641 12234445555566663
No 74
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=55.24 E-value=27 Score=36.25 Aligned_cols=72 Identities=24% Similarity=0.321 Sum_probs=47.4
Q ss_pred HHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccc--cccc---eeecCCCCCCCCCCCCeeEEeEE
Q 021992 128 QVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCT--SVNE---CICHGIPDSRALEDGDTINIDVT 202 (304)
Q Consensus 128 ~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~s--g~n~---~~~Hg~p~~r~L~~GDiV~iDvg 202 (304)
..-+++...++||.+-.+|...+...+.+.|-+-.| .|-..|.+ |... ..+...-++|+||.|++.+|.+|
T Consensus 309 ~lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~p----nF~~nvG~~igiefR~s~~~~nvkn~r~lq~g~~fnis~g 384 (1001)
T COG5406 309 MLQKYILGLVRPGTDSGIIYSEAEKYISSNGPELGP----NFIYNVGLMIGIEFRSSQKPFNVKNGRVLQAGCIFNISLG 384 (1001)
T ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHhcCCccCc----hHhhhhhhhccccccccccceeccCCceeccccEEEEeec
Confidence 333455568899999999999999999988764322 23333322 2211 12223346799999999999985
Q ss_pred E
Q 021992 203 V 203 (304)
Q Consensus 203 ~ 203 (304)
.
T Consensus 385 f 385 (1001)
T COG5406 385 F 385 (1001)
T ss_pred c
Confidence 4
No 75
>TIGR00115 tig trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.
Probab=55.05 E-value=41 Score=32.68 Aligned_cols=76 Identities=17% Similarity=0.276 Sum_probs=49.5
Q ss_pred CCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCCCCCCCCCCeeEEeEEEEeccccCCCc----c
Q 021992 139 PGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTS----A 214 (304)
Q Consensus 139 pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~s----R 214 (304)
.-+|+.+|+..+.....+++.+.. .++++++.||.|.+|+....+|=.-+.+ .
T Consensus 118 ~~vtde~vd~~i~~l~~~~a~~~~-----------------------~~~~~~~~gD~V~v~~~~~~dg~~~~~~~~~~~ 174 (408)
T TIGR00115 118 VEVTDEDVDEELEKLREQNATLVP-----------------------VERRAAEKGDRVTIDFEGFIDGEAFEGGKAENF 174 (408)
T ss_pred CCCCHHHHHHHHHHHHHhCCcccc-----------------------ccccccCCCCEEEEEEEEEECCEECcCCCCCCe
Confidence 357999999999988877654320 1235789999999999988776554433 3
Q ss_pred eEEeccCCHHHHHHHHHhHHHHHHhhhhcCCC
Q 021992 215 TFFCGDVDDEARNLVKVTKDCLHKAISVCAPG 246 (304)
Q Consensus 215 T~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG 246 (304)
+|.+|.. .....++.++.-++.|
T Consensus 175 ~~~lg~~---------~~~~~~ee~L~G~k~G 197 (408)
T TIGR00115 175 SLELGSG---------QFIPGFEEQLVGMKAG 197 (408)
T ss_pred EEEECCC---------CcchhHHHHhCCCCCC
Confidence 6666631 1223444555556666
No 76
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=52.19 E-value=18 Score=27.15 Aligned_cols=51 Identities=29% Similarity=0.290 Sum_probs=36.3
Q ss_pred CCCCCCCCeeEEeEEEEe-ccccCCCc------ceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCc
Q 021992 188 SRALEDGDTINIDVTVYL-NGYHGDTS------ATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGM 247 (304)
Q Consensus 188 ~r~L~~GDiV~iDvg~~~-~GY~aD~s------RT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~ 247 (304)
++..+.||.|.+++..+. +|-.-|.+ .+|.+|. .....+++.++..+++|-
T Consensus 2 ~~~~~~gd~V~i~y~~~~~~g~~~~~~~~~~~~~~~~~g~---------~~~i~g~e~al~~m~~Ge 59 (94)
T PF00254_consen 2 PRTPKEGDTVTIHYTGRLEDGKVFDSSYQEGEPFEFRLGS---------GQVIPGLEEALIGMKVGE 59 (94)
T ss_dssp SSSBSTTSEEEEEEEEEETTSEEEEETTTTTSEEEEETTS---------SSSSHHHHHHHTTSBTTE
T ss_pred CccCCCCCEEEEEEEEEECCCcEEEEeeecCcceeeeecc---------CccccchhhhcccccCCC
Confidence 356889999999999987 66555555 5565664 124557788888888885
No 77
>PF03477 ATP-cone: ATP cone domain; InterPro: IPR005144 The ATP-cone is an evolutionarily mobile, ATP-binding regulatory domain which is found in a variety of proteins including ribonucleotide reductases, phosphoglycerate kinases and transcriptional regulators []. In ribonucleotide reductase protein R1 (P28903 from SWISSPROT) from Escherichia coli this domain is located at the N terminus, and is composed mostly of helices []. It forms part of the allosteric effector region and contains the general allosteric activity site in a cleft located at the tip of the N-terminal region []. This site binds either ATP (activating) or dATP (inhibitory), with the base bound in a hydrophobic pocket and the phosphates bound to basic residues. Substrate binding to this site is thought to affect enzyme activity by altering the relative positions of the two subunits of ribonucleotide reductase.; PDB: 2XO4_A 1RLR_A 7R1R_B 5R1R_A 2XO5_B 2XAW_A 2R1R_C 2XAY_B 2X0X_C 2XAZ_A ....
Probab=40.40 E-value=28 Score=25.98 Aligned_cols=37 Identities=24% Similarity=0.310 Sum_probs=25.1
Q ss_pred hhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCC
Q 021992 123 GRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA 159 (304)
Q Consensus 123 ~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~ 159 (304)
..|+.++...+.+....++|+.||...+...+.+.|.
T Consensus 38 ~~i~~~V~~~l~~~~~~~is~~eI~~~v~~~L~~~~~ 74 (90)
T PF03477_consen 38 EEIASEVENKLYDSGKEEISTEEIQDIVENALMEEGF 74 (90)
T ss_dssp HHHHHHHHTC-ST----TEEHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHHhccCCCeeHHHHHHHHHHHHHcCCh
Confidence 3455566666555555599999999999999998764
No 78
>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.
Probab=37.02 E-value=1.9e+02 Score=24.85 Aligned_cols=55 Identities=15% Similarity=0.167 Sum_probs=37.5
Q ss_pred CCCCCCCCCCeeEEeEEEE-eccccCCCcc-----eEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCchh
Q 021992 186 PDSRALEDGDTINIDVTVY-LNGYHGDTSA-----TFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEY 249 (304)
Q Consensus 186 p~~r~L~~GDiV~iDvg~~-~~GY~aD~sR-----T~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~~~ 249 (304)
.+....+.||.|.+++... .+|-.-|-++ +|.+|. .....+++.++..+++|-+.
T Consensus 81 g~g~~p~~gd~V~v~Y~~~~~dG~v~~ss~~~~P~~f~vg~---------~~vi~Gl~e~L~~Mk~Ge~~ 141 (177)
T TIGR03516 81 GEGTTPEFGDLVTFEYDIRALDGDVIYSEEELGPQTYKVDQ---------QDLFSGLRDGLKLMKEGETA 141 (177)
T ss_pred CCCCcCCCCCEEEEEEEEEeCCCCEEEeCCCCCCEEEEeCC---------cchhHHHHHHHcCCCCCCEE
Confidence 3445568999999999776 5665545443 556653 23567788888889998543
No 79
>cd04938 TGS_Obg-like TGS_Obg-like: The C-terminal TGS domain of Obg-like GTPases such as those present in DRG (developmentally regulated GTP-binding protein), and GTP-binding proteins Ygr210 and YchF. The TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=36.51 E-value=39 Score=25.01 Aligned_cols=47 Identities=17% Similarity=0.150 Sum_probs=30.3
Q ss_pred ccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCCCCCCCCCCeeEE
Q 021992 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 199 (304)
Q Consensus 137 i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDiV~i 199 (304)
++.|.|-.|++..+|.-+.+.-.+. +-.+ ......+..|++||+|.|
T Consensus 28 l~~g~tv~d~a~~IH~d~~~~F~~A-----------~v~~-----~~~vg~d~~l~d~DVv~i 74 (76)
T cd04938 28 VKKGTTVGDVARKIHGDLEKGFIEA-----------VGGR-----RRLEGKDVILGKNDILKF 74 (76)
T ss_pred EcCCCCHHHHHHHHhHHHHhccEEE-----------EEcc-----CEEECCCEEecCCCEEEE
Confidence 4668899999999997665432211 1111 122345678999999987
No 80
>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
Probab=28.52 E-value=1e+02 Score=30.63 Aligned_cols=45 Identities=22% Similarity=0.395 Sum_probs=30.7
Q ss_pred CcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCCCCCCCCCCeeEEeEEEEeccc
Q 021992 140 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGY 208 (304)
Q Consensus 140 GvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY 208 (304)
-+|+.||+..+......+..+ .|.++.++.||.|.||+.+..+|=
T Consensus 131 ev~d~dvd~~L~~l~~~~a~~------------------------~~~e~~a~~gD~v~IDf~g~iDg~ 175 (441)
T COG0544 131 EVTDEDVDEELEKLRKRFATL------------------------EPVEGAAENGDRVTIDFEGSVDGE 175 (441)
T ss_pred ccCHHHHHHHHHHHHHhcCcc------------------------cccccccccCCEEEEEEEEEEcCe
Confidence 357788888877655544322 122222899999999999988775
No 81
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=27.55 E-value=1.1e+02 Score=28.98 Aligned_cols=103 Identities=18% Similarity=0.251 Sum_probs=53.2
Q ss_pred hHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCCCCCCCC-CCeeEEeEEEEe-ccccCCCcceEEeccC
Q 021992 144 DEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALED-GDTINIDVTVYL-NGYHGDTSATFFCGDV 221 (304)
Q Consensus 144 ~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~-GDiV~iDvg~~~-~GY~aD~sRT~~vG~~ 221 (304)
.+|..++.+.+.+.+..+.|+ ++-...+ ++ .-++.-+. =|+|-+|+++.- ++-..--.|.-+-|+.
T Consensus 234 ~~I~~~Vk~rl~~~~~~~vPm-------i~fakG~----g~-~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNl 301 (359)
T KOG2872|consen 234 RQIAEAVKKRLPELGLAPVPM-------ILFAKGS----GG-ALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNL 301 (359)
T ss_pred HHHHHHHHHhhhhhcCCCCce-------EEEEcCc----ch-HHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCC
Confidence 467777777777777766443 2211111 00 00111112 288889988752 2322222222223665
Q ss_pred CHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhhcCcceeeee--cccccccc
Q 021992 222 DDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQF--VGHGIGRV 279 (304)
Q Consensus 222 ~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~~G~~~~~~~--~GHgIG~~ 279 (304)
+|..- | -+-.+|.+.+.+++++.|-. ++. +||||=..
T Consensus 302 DP~~l--y-----------------~s~e~it~~v~~mv~~fG~~--ryI~NLGHGi~p~ 340 (359)
T KOG2872|consen 302 DPGVL--Y-----------------GSKEEITQLVKQMVKDFGKS--RYIANLGHGITPG 340 (359)
T ss_pred ChHHh--c-----------------CCHHHHHHHHHHHHHHhCcc--ceEEecCCCCCCC
Confidence 55331 1 12345667788888888854 333 79987553
No 82
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=27.22 E-value=48 Score=20.51 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=28.7
Q ss_pred hhhhHHHHHHhcCccccCCcCchHHHHHHHHHHH
Q 021992 122 SGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII 155 (304)
Q Consensus 122 A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~ 155 (304)
.|.+...++..+.+.+....|+.+|...+++.+.
T Consensus 3 ~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~ 36 (39)
T PF05184_consen 3 ECDICKFVVKEIEKLLKNNKTEEEIKKALEKACN 36 (39)
T ss_dssp HHHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHh
Confidence 3667788888888889999999999999988764
No 83
>PF02829 3H: 3H domain; InterPro: IPR004173 The 3H domain is named after its three highly conserved histidine residues. The 3H domain appears to be a small molecule-binding domain, based on its occurrence with other domains []. Several proteins carrying this domain are transcriptional regulators from the biotin repressor family. The transcription regulator TM1602 from Thermotoga maritima is a DNA-binding protein thought to belong to a family of de novo NAD synthesis pathway regulators. TM1602 has an N-terminal DNA-binding domain and a C-terminal 3H regulatory domain. The N-terminal domain appears to bind to the NAD promoter region and repress the de novo NAD biosynthesis operon, while the C-terminal 3H domain may bind to nicotinamide, nicotinic acid, or other substrate/products []. The 3H domain has a 2-layer alpha/beta sandwich fold.; GO: 0005488 binding; PDB: 1J5Y_A.
Probab=25.73 E-value=1.2e+02 Score=23.67 Aligned_cols=67 Identities=12% Similarity=0.164 Sum_probs=48.3
Q ss_pred eEEeEEEEeccccCCCcceEEeccCCHHHHHHHHHhHHHHHHhhhhcCCCc-------hhhHhhhhHHHhhhhcCc
Q 021992 197 INIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGM-------EYKKIGKTIQDHADRYNY 265 (304)
Q Consensus 197 V~iDvg~~~~GY~aD~sRT~~vG~~~~e~~~l~~~~~~a~~~ai~~~rPG~-------~~~dI~~ai~~~~~~~G~ 265 (304)
..+|+.+...+|- .+++.+-+-. ..+.++.++...+.....+..+--|+ +-.+..+.|.+.+++.||
T Consensus 23 ~V~DV~veHp~YG-~i~~~L~i~s-r~Dv~~Fi~~l~~~~~~~Ls~LT~GvH~HtI~a~~~e~l~~I~~~L~~~G~ 96 (98)
T PF02829_consen 23 RVLDVIVEHPVYG-EITGNLNISS-RRDVDKFIEKLEKSKAKPLSSLTGGVHYHTIEAPDEEDLDKIEEALKKKGF 96 (98)
T ss_dssp EEEEEEEEETTTE-EEEEEEEE-S-HHHHHHHHHHHHH--S--STTGGGGEEEEEEEESSHHHHHHHHHHHHHTT-
T ss_pred EEEEEEEeCCCCc-EEEEEEecCC-HHHHHHHHHHHhccCCcchHHhcCCEeeEEEEECCHHHHHHHHHHHHHCCC
Confidence 3458999999887 9999998853 56677777777777777777777774 456788899999999987
No 84
>KOG2611 consensus Neurochondrin/leucine-rich protein (Neurochondrin) [Function unknown]
Probab=25.57 E-value=41 Score=33.99 Aligned_cols=66 Identities=18% Similarity=0.217 Sum_probs=41.4
Q ss_pred CCeeEEeEEEEeccccCCCcceEEecc--------CCHHHHH--HHHHhHHHHHHhhhhcCCCchhhHhhhhHHHh
Q 021992 194 GDTINIDVTVYLNGYHGDTSATFFCGD--------VDDEARN--LVKVTKDCLHKAISVCAPGMEYKKIGKTIQDH 259 (304)
Q Consensus 194 GDiV~iDvg~~~~GY~aD~sRT~~vG~--------~~~e~~~--l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~ 259 (304)
+|.-.+-+++.|.|||+|++.-|+.|- .-|+... +-...-+..-..+..++||.--.++-.+-+++
T Consensus 584 nD~taLvvS~aYkG~WsDLsELWFLGMQt~~G~lPLvPWLs~~AL~S~W~e~ivk~L~kVk~~tl~~nv~sAYe~~ 659 (698)
T KOG2611|consen 584 NDPTALVVSIAYKGYWSDLSELWFLGMQTMCGVLPLVPWLSEFALESGWAEGIVKTLKKVKIGTLPANVKSAYEDF 659 (698)
T ss_pred CCCceEEeehhhhhhhhhHHHHHHHhHHHHcCcccchhhhcHHHHhcccHHHHHHHHhcCCCCCcCHHHHHHHHHH
Confidence 677777799999999999999999872 1122211 11222344445567788886555554444443
No 85
>PRK05728 DNA polymerase III subunit chi; Validated
Probab=24.74 E-value=4e+02 Score=21.92 Aligned_cols=99 Identities=10% Similarity=0.045 Sum_probs=52.7
Q ss_pred HHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCcccccccc----ceeecCCCCCCCCCC
Q 021992 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVN----ECICHGIPDSRALED 193 (304)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n----~~~~Hg~p~~r~L~~ 193 (304)
..+.+|+++++++..-...+.-.-+ .+....+.+.+....... |-+....|.. ..+.=+. ++..-..
T Consensus 14 ~~~~~c~L~~ka~~~g~rv~I~~~d-~~~a~~lD~~LW~~~~~s-------FlPH~~~~~~~~~~~PV~l~~-~~~~~~~ 84 (142)
T PRK05728 14 LEALLCELAEKALRAGWRVLVQCED-EEQAEALDEALWTFRDES-------FLPHGLAGEGPAAGQPVLLTW-PGKRNAN 84 (142)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEcCC-HHHHHHHHHHhcCCCCCc-------CCCCCcCCCCCCCCCCEEEEc-CCCCCCC
Confidence 6788999999999875555443333 456777888887553321 2111111111 0111110 1111223
Q ss_pred CCeeEEeEEEEeccccCCCcceEEe-ccCCHHHH
Q 021992 194 GDTINIDVTVYLNGYHGDTSATFFC-GDVDDEAR 226 (304)
Q Consensus 194 GDiV~iDvg~~~~GY~aD~sRT~~v-G~~~~e~~ 226 (304)
++-++|.+....-.+.+...|.+-+ |. +++.+
T Consensus 85 ~~~~LinL~~~~p~~~~~F~Rvieiv~~-d~~~~ 117 (142)
T PRK05728 85 HRDLLINLDGAVPAFAAAFERVVDFVGY-DEAAK 117 (142)
T ss_pred CCcEEEECCCCCcchhhcccEEEEEeCC-CHHHH
Confidence 4555666666666677788887665 43 44444
No 86
>PRK06646 DNA polymerase III subunit chi; Provisional
Probab=24.12 E-value=4.4e+02 Score=22.21 Aligned_cols=40 Identities=5% Similarity=-0.105 Sum_probs=27.6
Q ss_pred HHHHhhhhhHHHHHHhcCccccCCcCchHHHHHHHHHHHhC
Q 021992 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDN 157 (304)
Q Consensus 117 e~mR~A~~ia~~~l~~a~~~i~pGvTe~EI~~~v~~~i~~~ 157 (304)
...+.+|+++++++..-.+.+--.-++ +....+.+.+-..
T Consensus 13 ~~~~~acrL~~Ka~~~G~rv~I~~~d~-~~~~~LD~~LWtf 52 (154)
T PRK06646 13 LLLKSILLLIEKCYYSDLKSVILTADA-DQQEMLNKNLWTY 52 (154)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEcCCH-HHHHHHHHHhcCC
Confidence 357889999999999865554444333 5666777777654
No 87
>cd01669 TGS_Ygr210_C TGS_Ygr210_C: The C-terminal TGS domain of Ygr210 GTP-binding protein which is a member of Obg-like family of GTPases, and present in archaea. Several Obg-like family members possess a C-terminal RNA-binding domain, the TGS domain, which is also present in threonyl-tRNA synthetase and in bacterial guanosine polyphosphatase SpoT. TGS is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=21.95 E-value=1.4e+02 Score=22.05 Aligned_cols=48 Identities=23% Similarity=0.338 Sum_probs=30.5
Q ss_pred ccCCcCchHHHHHHHHHHHhCCCCCCCCCCCCCCccccccccceeecCCCCCCCCCCCCeeEE
Q 021992 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 199 (304)
Q Consensus 137 i~pGvTe~EI~~~v~~~i~~~G~~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDiV~i 199 (304)
++.|.|-.|.+..+|..+.+. |-..+.. .| ..-.+-+.+|++||+|.|
T Consensus 27 l~~GaTv~D~A~~IHtdi~~~-----------f~~Ai~~-k~---~~~vg~~~~L~dgDvV~I 74 (76)
T cd01669 27 LPKGSTARDLAYAIHTDIGDG-----------FLHAIDA-RT---GRRVGEDYELKHRDVIKI 74 (76)
T ss_pred ECCCCCHHHHHHHHHHHHHhc-----------ceeeEEe-eC---CEEeCCCcEecCCCEEEE
Confidence 466899999999999777543 1100100 11 223356778999999986
No 88
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=20.30 E-value=91 Score=21.56 Aligned_cols=34 Identities=18% Similarity=0.389 Sum_probs=22.9
Q ss_pred HHHhhhhhHHHHHHhcCcc----ccCC-cCchHHHHHHH
Q 021992 118 CMRVSGRLAAQVLEYAGTL----VKPG-ITTDEIDKAVH 151 (304)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~----i~pG-vTe~EI~~~v~ 151 (304)
.+.+|+++|.++++.-... ++-| +|+.|+++.++
T Consensus 10 GYe~aa~iAk~A~~~g~svre~v~~~g~lt~ee~d~ll~ 48 (55)
T PF10415_consen 10 GYEKAAEIAKEALAEGRSVREVVLEEGLLTEEELDELLD 48 (55)
T ss_dssp HHHHHHHHHHHHHHHT--HHHHHHHTTSS-HHHHHHHTS
T ss_pred ccHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcC
Confidence 5788999999988754322 3456 78899888764
No 89
>PF12631 GTPase_Cys_C: Catalytic cysteine-containing C-terminus of GTPase, MnmE; PDB: 1XZQ_A 1XZP_A 2GJ8_D 3GEH_A 3GEI_B 3GEE_A.
Probab=20.30 E-value=1.8e+02 Score=20.98 Aligned_cols=42 Identities=12% Similarity=0.323 Sum_probs=30.2
Q ss_pred CCHHHHHHHHHhHHHHHHhhhhcCCCchhhHhhhhHHHhhhh
Q 021992 221 VDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADR 262 (304)
Q Consensus 221 ~~~e~~~l~~~~~~a~~~ai~~~rPG~~~~dI~~ai~~~~~~ 262 (304)
.+.+++.+.+.+.+.++.+++.++.|.+.-=+...++...+.
T Consensus 10 ~~~Rq~~~L~~a~~~l~~a~~~l~~~~~~dl~a~~L~~A~~~ 51 (73)
T PF12631_consen 10 TNARQRQLLEQALEHLEDALEALENGLPLDLVAEDLREALES 51 (73)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999887655444444444443
Done!