Query 021993
Match_columns 304
No_of_seqs 180 out of 583
Neff 4.0
Searched_HMMs 46136
Date Fri Mar 29 07:12:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021993.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021993hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02425 probable fructose-bis 100.0 4E-128 9E-133 926.1 27.4 299 1-304 1-299 (390)
2 PLN02227 fructose-bisphosphate 100.0 2E-127 4E-132 922.4 26.3 303 1-304 1-308 (399)
3 PLN02455 fructose-bisphosphate 100.0 3E-123 7E-128 885.7 26.3 260 44-304 4-264 (358)
4 KOG1557 Fructose-biphosphate a 100.0 2E-123 3E-128 875.9 23.2 259 46-304 10-269 (363)
5 cd00948 FBP_aldolase_I_a Fruct 100.0 1E-121 3E-126 868.9 25.7 255 50-304 2-257 (330)
6 PTZ00019 fructose-bisphosphate 100.0 3E-121 5E-126 872.7 26.0 258 47-304 2-262 (355)
7 PF00274 Glycolytic: Fructose- 100.0 1E-110 3E-115 802.2 17.8 254 51-304 1-255 (348)
8 cd00344 FBP_aldolase_I Fructos 100.0 7E-109 2E-113 784.2 23.9 255 50-304 2-258 (328)
9 COG3588 Fructose-1,6-bisphosph 100.0 4.8E-97 1E-101 693.6 17.2 254 50-304 3-258 (332)
10 PRK05377 fructose-1,6-bisphosp 100.0 2.7E-72 5.9E-77 525.2 17.7 205 61-275 11-231 (296)
11 cd00949 FBP_aldolase_I_bact Fr 100.0 2.5E-67 5.5E-72 491.1 17.1 200 61-270 8-223 (292)
12 PRK04161 tagatose 1,6-diphosph 93.9 1.7 3.7E-05 43.0 13.8 202 57-286 12-233 (329)
13 PRK12399 tagatose 1,6-diphosph 93.7 2.1 4.6E-05 42.3 14.0 198 58-285 11-230 (324)
14 TIGR01232 lacD tagatose 1,6-di 93.5 1 2.2E-05 44.5 11.5 202 57-286 11-232 (325)
15 PRK12858 tagatose 1,6-diphosph 77.5 53 0.0011 32.5 12.8 179 62-268 17-208 (340)
16 cd07941 DRE_TIM_LeuA3 Desulfob 47.2 97 0.0021 29.1 7.9 82 194-297 113-195 (273)
17 PF15608 PELOTA_1: PELOTA RNA 43.5 21 0.00046 29.9 2.6 36 245-298 23-58 (100)
18 PF01261 AP_endonuc_2: Xylose 39.8 1.7E+02 0.0036 24.5 7.5 80 163-242 70-153 (213)
19 PF11285 DUF3086: Protein of u 39.2 29 0.00062 33.8 3.1 49 91-147 204-255 (283)
20 smart00832 C8 C8 domain. This 33.5 33 0.00071 26.6 2.1 17 202-218 49-65 (76)
21 PF08742 C8: C8 domain; Inter 32.8 35 0.00075 25.5 2.1 19 201-219 46-64 (74)
22 cd06287 PBP1_LacI_like_8 Ligan 31.0 3.9E+02 0.0086 24.0 13.9 167 106-293 54-246 (269)
23 PRK11303 DNA-binding transcrip 30.8 4.1E+02 0.009 24.1 12.0 166 106-293 115-306 (328)
24 PF10058 DUF2296: Predicted in 29.0 7 0.00015 29.0 -2.2 20 207-226 20-43 (54)
25 cd00532 MGS-like MGS-like doma 24.6 1E+02 0.0023 24.9 3.7 39 47-89 9-47 (112)
26 cd00550 ArsA_ATPase Oxyanion-t 22.9 6E+02 0.013 23.4 9.3 94 160-273 104-204 (254)
27 cd06274 PBP1_FruR Ligand bindi 22.7 5.1E+02 0.011 22.5 9.6 165 107-294 54-247 (264)
28 cd00635 PLPDE_III_YBL036c_like 22.5 4.1E+02 0.009 23.7 7.4 86 138-234 117-204 (222)
29 PRK02228 V-type ATP synthase s 22.0 1.7E+02 0.0038 23.7 4.5 76 75-171 12-94 (100)
30 COG2861 Uncharacterized protei 20.4 3.4E+02 0.0073 26.4 6.6 56 190-260 184-239 (250)
No 1
>PLN02425 probable fructose-bisphosphate aldolase
Probab=100.00 E-value=4.1e-128 Score=926.13 Aligned_cols=299 Identities=92% Similarity=1.387 Sum_probs=290.4
Q ss_pred CchhhhhhhcccccccccccccccccCCCCccccccccccccccccchHHHHHHHHHHhcCCCCceEeecCCCcchHHHh
Q 021993 1 MAWASFAKLNAASSQWIGQQSFTQRTGSSSSTRFATRRVSVPIRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRL 80 (304)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eL~~tA~~i~a~GKGIlA~DES~gt~~Krl 80 (304)
||.+|++|+++.++.|+.+|++.+.+.|.. +.+++++.+..+|++||.+||++|++|||||||+|||+|||+|||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~eL~~tA~~i~apGKGIlA~DES~gT~~Krl 75 (390)
T PLN02425 1 MASASFVKLNAASSTWIGQRSFGQRSSSSS-----TRRVSFRIRAGSYSDELVQTAKSVASPGRGILAIDESNATCGKRL 75 (390)
T ss_pred CccchhccCCcccchhhcCcccccCCCccc-----ccccccccccHHHHHHHHHHHHHHhCCCCceEeeccccCchhHHH
Confidence 788999999999999999999999776443 445677777788999999999999999999999999999999999
Q ss_pred hhcCCCCchhhhhhhhhhhccCCCCCCceeEEeeccccccccccCCcchHHHHHhCCccceeecCCCcccCCCCCCCCcc
Q 021993 81 ASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWC 160 (304)
Q Consensus 81 ~~iGvente~nrr~yR~ll~ttp~~~~~IsGvILfeETl~q~~~dG~~~~~~L~~kGIvPGIKVDkGl~~l~g~~ge~~t 160 (304)
++|||||||+|||+||++|||+|+|++||||||||||||||+++||+||+|+|+++|||||||||||++|++|.++|++|
T Consensus 76 ~~iGVente~nrr~yR~lLfttp~~~~~IsGvILFeETl~q~~~dG~p~~d~L~~~GIVPGIKVDkGl~~l~G~~~e~~t 155 (390)
T PLN02425 76 ASIGLDNTETNRQAYRQLLLTTPGLGEYISGAILFEETLYQSTTDGKKFVDCLRDQNIVPGIKVDKGLVPLPGSNNESWC 155 (390)
T ss_pred HHcCCCCchhhhHHHHhhhccCcchhhceEEEEcchHhccccccCCcCHHHHHHHCCceeeEEecCCCCcCCCCCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHhhcCCccccceeeeecCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCCCCHHHHHHHH
Q 021993 161 QGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVA 240 (304)
Q Consensus 161 ~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~Ps~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~dg~h~ie~c~~Vt 240 (304)
||||||++||++||++|||||||||||+|++.||+.+|++|||.|||||+|||++||||||||||||||||||++|++||
T Consensus 156 ~GLDgL~~R~~~y~~~GarFAKWRsViki~~~Ps~~aI~~na~~LArYA~icQ~~GLVPIVEPEVlidGdH~ie~c~~Vt 235 (390)
T PLN02425 156 QGLDGLASRSAEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVA 235 (390)
T ss_pred CChHHHHHHHHHHHHcCCceeehheeeccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCceecceecCCCCcCHHHHHHHH
Confidence 99999999999999999999999999999888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCcccccccccccccCCCCCCCCCCChHHHHHHHHHHhccCCCCCCCCccC
Q 021993 241 EKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMV 304 (304)
Q Consensus 241 e~vL~~vf~aL~~~~V~LEG~lLKpnMV~pG~~~~~~~~~eeVA~~Tv~~L~rtvP~avpGI~F 304 (304)
|+||++||++|++|||+|||+|||||||+||++|+.+++||+||++||++|+||||+|||||+|
T Consensus 236 e~VL~~vf~aL~~~~V~lEG~LLKPnMV~pG~~~~~~~s~e~VA~~Tv~~l~rtVP~AVPGI~F 299 (390)
T PLN02425 236 EKVWSEVFFYLAQNNVLFEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLRRRVPPAVPGIMF 299 (390)
T ss_pred HHHHHHHHHHHHHcCceeecceecccccccCCcCCCCCCHHHHHHHHHHHHHhcCCCCCCccee
Confidence 9999999999999999999999999999999999999999999999999999999999999999
No 2
>PLN02227 fructose-bisphosphate aldolase I
Probab=100.00 E-value=2e-127 Score=922.39 Aligned_cols=303 Identities=72% Similarity=1.150 Sum_probs=286.0
Q ss_pred Cchh--hhhhhccccccccccccccc--ccCCCCcccccccccccccc-ccchHHHHHHHHHHhcCCCCceEeecCCCcc
Q 021993 1 MAWA--SFAKLNAASSQWIGQQSFTQ--RTGSSSSTRFATRRVSVPIR-AGAYTEELVKTAKTIASPGRGILAIDESNAT 75 (304)
Q Consensus 1 ~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~eL~~tA~~i~a~GKGIlA~DES~gt 75 (304)
||++ +.+|.+|..+.|+.||+++. +|. .+.-++++.++++..+ ..+|++||.+||++|++|||||||+|||+||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~eL~~tA~~ivapGKGIlAaDES~gT 79 (399)
T PLN02227 1 MASSTATMLKASPVKSDWVKGQSLLLRQPSS-VSAIRSHVAPSALTVRAASAYADELVKTAKTIASPGHGIMAMDESNAT 79 (399)
T ss_pred CCcccccccCCCcchhhhhcccceeecCCCc-ceeeeecccCccceEeecHHHHHHHHHHHHHHhCCCCceeeeccCcCh
Confidence 4444 55677788999999999655 332 2223556777777666 5679999999999999999999999999999
Q ss_pred hHHHhhhcCCCCchhhhhhhhhhhccCCCCCCceeEEeeccccccccccCCcchHHHHHhCCccceeecCCCcccCCCCC
Q 021993 76 CGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSN 155 (304)
Q Consensus 76 ~~Krl~~iGvente~nrr~yR~ll~ttp~~~~~IsGvILfeETl~q~~~dG~~~~~~L~~kGIvPGIKVDkGl~~l~g~~ 155 (304)
|+|||++|||||||+|||+||++|||+|+|++||||||||||||||+++||+||+|+||++|||||||||||++|++|++
T Consensus 80 ~gKRl~~iGVenteenRr~yR~lLfttp~~~~~IsGvILFeETl~Q~~~dG~pf~d~L~~~GIVPGIKVDKGl~~l~g~~ 159 (399)
T PLN02227 80 CGKRLASIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSY 159 (399)
T ss_pred hHHHHHHcCCCCchHHHHHHHHhcccCcchhcceEEEEcchhhccCcCcCCcCHHHHHHHCCCeeeEEcCCCcccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCChhHHHHHHHHHhhcCCccccceeeeecCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCCCCHHH
Q 021993 156 NESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIER 235 (304)
Q Consensus 156 ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~Ps~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~dg~h~ie~ 235 (304)
+|++|||||||++||++||++|||||||||||+|++.||+.+|++|||.|||||+|||++||||||||||||||||||++
T Consensus 160 ~e~~tqGLDgL~~R~~~Y~~~GarFAKWRsVikI~~~PS~~aI~~na~~LArYA~icQ~~GLVPIVEPEVliDGdH~ie~ 239 (399)
T PLN02227 160 DESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEIMLDGEHGIDR 239 (399)
T ss_pred CCccCCChHHHHHHHHHHHHcCCceeehheeeccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCceecceecCCCCcCHHH
Confidence 99999999999999999999999999999999998889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccccccccccccCCCCCCCCCCChHHHHHHHHHHhccCCCCCCCCccC
Q 021993 236 TLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMV 304 (304)
Q Consensus 236 c~~Vte~vL~~vf~aL~~~~V~LEG~lLKpnMV~pG~~~~~~~~~eeVA~~Tv~~L~rtvP~avpGI~F 304 (304)
|++|||+||++||++|++|||||||+|||||||+||++|+.+++|||||++||++|+||||+|||||+|
T Consensus 240 c~~Vte~VL~~vfkaL~~h~V~lEG~LLKPnMV~pG~~~~~~~s~e~VA~~Tv~~L~rtVP~AVPGI~F 308 (399)
T PLN02227 240 TYDVAEKVWAEVFFYLAQNNVMFEGILLKPSMVTPGAEATDRATPEQVASYTLKLLRNRIPPAVPGIMF 308 (399)
T ss_pred HHHHHHHHHHHHHHHHHHcCceeecceeccceeccCccCCCcCCHHHHHHHHHHHHHhcCCCCCCeeee
Confidence 999999999999999999999999999999999999999999999999999999999999999999999
No 3
>PLN02455 fructose-bisphosphate aldolase
Probab=100.00 E-value=3.2e-123 Score=885.68 Aligned_cols=260 Identities=60% Similarity=0.969 Sum_probs=255.1
Q ss_pred cccchHHHHHHHHHHhcCCCCceEeecCCCcchHHHhhhcCCCCchhhhhhhhhhhccCCCCCCceeEEeeccccccccc
Q 021993 44 RAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQST 123 (304)
Q Consensus 44 ~~~~~~~eL~~tA~~i~a~GKGIlA~DES~gt~~Krl~~iGvente~nrr~yR~ll~ttp~~~~~IsGvILfeETl~q~~ 123 (304)
+..++++||.+||++|++|||||||+|||+|||+|||++|||||||+|||+||++|||+|+|++||||||||||||||++
T Consensus 4 ~~~~~~~eL~~tA~~iva~GKGiLAADES~gT~gKRl~~iGVente~nRr~yR~lLfttp~~~~~IsGvILfeETl~Q~~ 83 (358)
T PLN02455 4 FVGKYADELIKNAKYIATPGKGILAADESTGTIGKRLASINVENVESNRQALRELLFTAPGALQYLSGVILFEETLYQKT 83 (358)
T ss_pred ccHHHHHHHHHHHHHHhCCCCeeEEeccCCCchhhHHHhcCCCCchHHHHHHHHhhccCCcccccEEEEEcchHhccccc
Confidence 34679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcchHHHHHhCCccceeecCCCcccCCCCCCCCccCChhHHHHHHHHHhhcCCccccceeeeecC-CCCCHHHHHHHH
Q 021993 124 TDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIP-CGPSALAVKEAA 202 (304)
Q Consensus 124 ~dG~~~~~~L~~kGIvPGIKVDkGl~~l~g~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~-~~Ps~~aI~~na 202 (304)
+||+||+|+|+++|||||||||||++|++|++||++|||||||++||++||++|||||||||||+|. +.||..||.+||
T Consensus 84 ~dG~p~~~~L~~~GIvPGIKVDkGl~~l~g~~ge~~t~GLDgL~~R~~~y~~~GarFAKWRsVikI~~~~PS~~ai~~na 163 (358)
T PLN02455 84 SDGKPFVDVLKENGVLPGIKVDKGTVELAGTNGETTTQGLDGLGARCAKYYEAGARFAKWRAVLKIGPTEPSELAIQENA 163 (358)
T ss_pred cCCcCHHHHHHHCCCeeeEEecCCccccCCCCCCccCcchHHHHHHHHHHHhcCCceeeceeeeecCCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999995 459999999999
Q ss_pred HHHHHHHHHHHhCCceeeecceecCCCCCCHHHHHHHHHHHHHHHHHHHHhCCcccccccccccccCCCCCCCCCCChHH
Q 021993 203 WGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPET 282 (304)
Q Consensus 203 ~~LAryAaicQ~~GLVPIVEPEVl~dg~h~ie~c~~Vte~vL~~vf~aL~~~~V~LEG~lLKpnMV~pG~~~~~~~~~ee 282 (304)
+.|||||+|||++||||||||||||||||||++|++|||+||++||++|++|||+|||+|||||||+||++|+.+ ||||
T Consensus 164 ~~LArYA~icQ~~GlVPIVEPEvL~dGdH~i~~c~~Vte~Vl~~vf~aL~~~~V~lEG~LLKPnMV~pG~~~~~~-s~e~ 242 (358)
T PLN02455 164 QGLARYAIICQENGLVPIVEPEILVDGSHDIKKCAAVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSDSPKV-SPEV 242 (358)
T ss_pred HHHHHHHHHHHHcCCCceecccccCCCCCCHHHHHHHHHHHHHHHHHHHHHcCcccccceeccccccCCcccCcC-CHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999766 9999
Q ss_pred HHHHHHHHhccCCCCCCCCccC
Q 021993 283 IAKYTLTMLKRRVPPAVPGIMV 304 (304)
Q Consensus 283 VA~~Tv~~L~rtvP~avpGI~F 304 (304)
||++||++|+||||+|||||+|
T Consensus 243 vA~~Tv~~l~rtVP~avpGI~F 264 (358)
T PLN02455 243 IAEYTVRALQRTVPPAVPGIVF 264 (358)
T ss_pred HHHHHHHHHHhhCCccCCccee
Confidence 9999999999999999999999
No 4
>KOG1557 consensus Fructose-biphosphate aldolase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-123 Score=875.92 Aligned_cols=259 Identities=66% Similarity=1.003 Sum_probs=255.8
Q ss_pred cchHHHHHHHHHHhcCCCCceEeecCCCcchHHHhhhcCCCCchhhhhhhhhhhccCCCCCCceeEEeeccccccccccC
Q 021993 46 GAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTD 125 (304)
Q Consensus 46 ~~~~~eL~~tA~~i~a~GKGIlA~DES~gt~~Krl~~iGvente~nrr~yR~ll~ttp~~~~~IsGvILfeETl~q~~~d 125 (304)
..+.+||.+||++|++|||||||+|||+|||+|||++|||||||+|||+|||+|||+|++++||||||||||||||+++|
T Consensus 10 ~~~~~EL~~~A~~I~~pGkGILAaDES~~T~gkRl~sIgveNtE~NRr~yRelLfttpg~~~~IsGvILfeETlyQkt~d 89 (363)
T KOG1557|consen 10 KAQKDELIKIAKKIVTPGKGILAADESTGTIGKRLASIGVENTEENRRAYRELLFTTPGLNQYISGVILFEETLYQKTDD 89 (363)
T ss_pred HHHHHHHHHHHHHhcCCCCceEeecCCcchHHHHHHhcCCcccHHHHHHHHHHhhcCCChhhccceEEeeeehheeeCCC
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHHhCCccceeecCCCcccCCCCCCCCccCChhHHHHHHHHHhhcCCccccceeeeecC-CCCCHHHHHHHHHH
Q 021993 126 GKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIP-CGPSALAVKEAAWG 204 (304)
Q Consensus 126 G~~~~~~L~~kGIvPGIKVDkGl~~l~g~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~-~~Ps~~aI~~na~~ 204 (304)
|+||+|+|+++|||||||||||++||+|++||++|||||||.+||++||++||+|||||||++|. ++||.++|.|||+.
T Consensus 90 Gkpf~~~L~~~givpGIKvDKG~vplaGt~~E~ttqGLD~L~~Rca~y~k~Ga~FAKWR~vlki~~~~PS~lai~EnA~~ 169 (363)
T KOG1557|consen 90 GKPFVDLLKEKGIVPGIKVDKGLVPLAGTNGETTTQGLDGLAERCAQYYKDGARFAKWRAVLKIGDGTPSALAIKENANG 169 (363)
T ss_pred CCCHHHHHHhcCCccceEecCCcccccccCCcceeechhhHHHHHHHHHHcCCchhheeEEEEecCCCchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999996 56999999999999
Q ss_pred HHHHHHHHHhCCceeeecceecCCCCCCHHHHHHHHHHHHHHHHHHHHhCCcccccccccccccCCCCCCCCCCChHHHH
Q 021993 205 LARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIA 284 (304)
Q Consensus 205 LAryAaicQ~~GLVPIVEPEVl~dg~h~ie~c~~Vte~vL~~vf~aL~~~~V~LEG~lLKpnMV~pG~~~~~~~~~eeVA 284 (304)
|||||+|||+||||||||||||.||||||+||++|||+||++||++|++|||||||+||||||||||++|+.|++||+||
T Consensus 170 LARYA~IcQ~nGLVPIVEPEil~dGdHdi~r~~~VtE~Vla~vykaL~~hhV~lEGtLLKPnMVTpG~~s~~K~tpe~iA 249 (363)
T KOG1557|consen 170 LARYASICQQNGLVPIVEPEILPDGDHDIKRCQYVTEKVLAAVYKALNDHHVYLEGTLLKPNMVTPGAESTEKYTPEQIA 249 (363)
T ss_pred HHHHHHHHhhcCcccccccccccCCcccHHHHHHHHHHHHHHHHHHhhhcceeeeceecccccccCCccccccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCCCCCccC
Q 021993 285 KYTLTMLKRRVPPAVPGIMV 304 (304)
Q Consensus 285 ~~Tv~~L~rtvP~avpGI~F 304 (304)
.+||++|+||||+|||||+|
T Consensus 250 ~~TvtaLrrtVP~AVPGI~F 269 (363)
T KOG1557|consen 250 LATVTALRRTVPAAVPGIVF 269 (363)
T ss_pred HHHHHHHHhcCCCCCceEEE
Confidence 99999999999999999998
No 5
>cd00948 FBP_aldolase_I_a Fructose-1,6-bisphosphate aldolase. The enzyme catalyzes the cleavage of fructose 1,6-bisphosphate to glyceraldehyde 3-phosphate and dihydroxyacetone phosphate (DHAP). This family includes proteins found in vertebrates, plants, and bacterial plant pathogens. Mutations in the aldolase genes in humans cause hemolytic anemia and hereditary fructose intolerance. The enzyme is a member of the class I aldolase family, which utilizes covalent catalysis through a Schiff base formed between a lysine residue of the enzyme and ketose substrates.
Probab=100.00 E-value=1.3e-121 Score=868.94 Aligned_cols=255 Identities=69% Similarity=1.083 Sum_probs=252.6
Q ss_pred HHHHHHHHHhcCCCCceEeecCCCcchHHHhhhcCCCCchhhhhhhhhhhccCCCCCCceeEEeeccccccccccCCcch
Q 021993 50 EELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKF 129 (304)
Q Consensus 50 ~eL~~tA~~i~a~GKGIlA~DES~gt~~Krl~~iGvente~nrr~yR~ll~ttp~~~~~IsGvILfeETl~q~~~dG~~~ 129 (304)
+||.+||++|++|||||||+|||+|||+|||++|||||||+|||+||++|||+|+|++||||||||||||||+++||+||
T Consensus 2 ~eL~~tA~~iv~~GKGilAADES~gT~~Krl~~iGvente~nrr~yR~llft~p~~~~~IsGvILfeeTl~q~~~dG~p~ 81 (330)
T cd00948 2 EELIKTAKAIVAPGKGILAADESTGTIGKRFASIGVENTEENRRAYRELLFTTPGLGQYISGVILFEETLYQKTDDGKPF 81 (330)
T ss_pred hHHHHHHHHHhCCCCeEEEecCCCCchHHHHHHcCCCCchHHHHHHHHhhccCCCccccEEEEECChhhccccccCCcCh
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCccceeecCCCcccCCCCCCCCccCChhHHHHHHHHHhhcCCccccceeeeecCCC-CCHHHHHHHHHHHHHH
Q 021993 130 VDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCG-PSALAVKEAAWGLARY 208 (304)
Q Consensus 130 ~~~L~~kGIvPGIKVDkGl~~l~g~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~-Ps~~aI~~na~~LAry 208 (304)
+|+|+++|||||||||||++|++|+++|++|||||+|++||++||++|||||||||||+|++. ||..+|.+|++.||||
T Consensus 82 ~~~L~~~GIvPgIKVDkGl~~l~g~~~e~~t~GLD~L~~R~~~y~~~GarFAKwRsVi~i~~~~PS~~~I~~na~~Lary 161 (330)
T cd00948 82 VDILKEKGIVPGIKVDKGLVPLAGTDGETTTQGLDGLAERCAKYYKQGARFAKWRAVLKIGNGTPSELAIKENAHGLARY 161 (330)
T ss_pred HHHHHHCCCeeeEEeCCCccccCCCCCCccCcChHHHHHHHHHHhhcCCcceeeheeeeccCCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999755 9999999999999999
Q ss_pred HHHHHhCCceeeecceecCCCCCCHHHHHHHHHHHHHHHHHHHHhCCcccccccccccccCCCCCCCCCCChHHHHHHHH
Q 021993 209 AAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTL 288 (304)
Q Consensus 209 AaicQ~~GLVPIVEPEVl~dg~h~ie~c~~Vte~vL~~vf~aL~~~~V~LEG~lLKpnMV~pG~~~~~~~~~eeVA~~Tv 288 (304)
|+|||++||||||||||||||||||++|++|||+||++||++|++|||+|||+|||||||+||++|+.+++|||||++||
T Consensus 162 A~icq~~GLVPIVEPEVl~dG~H~i~~c~~vte~Vl~~vf~aL~~~~V~lEG~lLKPnMV~pG~~~~~~~~~e~vA~~Tv 241 (330)
T cd00948 162 AAICQENGLVPIVEPEVLMDGDHDIERCQEVTEKVLAAVYKALNDHHVLLEGTLLKPNMVTPGADCKKKASPEEVAEYTV 241 (330)
T ss_pred HHHHHHcCCCceecccccCCCCCCHHHHHHHHHHHHHHHHHHHHHcCcccccceeccccccCCCcCCCcCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCCCccC
Q 021993 289 TMLKRRVPPAVPGIMV 304 (304)
Q Consensus 289 ~~L~rtvP~avpGI~F 304 (304)
++|+||||+|||||+|
T Consensus 242 ~~l~rtvP~avpGI~F 257 (330)
T cd00948 242 RALRRTVPAAVPGIVF 257 (330)
T ss_pred HHHHhcCCccCCeeee
Confidence 9999999999999999
No 6
>PTZ00019 fructose-bisphosphate aldolase; Provisional
Probab=100.00 E-value=2.5e-121 Score=872.75 Aligned_cols=258 Identities=62% Similarity=1.009 Sum_probs=254.9
Q ss_pred chHHHHHHHHHHhcCCCCceEeecCCCcchHHHhhhcCCCCchhhhhhhhhhhccCCCCCCceeEEeeccccccccccCC
Q 021993 47 AYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDG 126 (304)
Q Consensus 47 ~~~~eL~~tA~~i~a~GKGIlA~DES~gt~~Krl~~iGvente~nrr~yR~ll~ttp~~~~~IsGvILfeETl~q~~~dG 126 (304)
++++||.+||++|++|||||||+|||+|||+|||++|||||||+|||+||++|||||+|++||||||||||||||+++||
T Consensus 2 ~~~~eL~~tA~~i~~~GKGilAADES~gT~~Krl~~iGvente~nrr~~R~llfttp~~~~~IsGvILfeETl~q~~~dG 81 (355)
T PTZ00019 2 EYAKELAETAKKIAAPGKGILAADESTGTIKKRFDPIGLENTEENRRAYRELLFTTEGLEQYISGVILFEETVYQKAPSG 81 (355)
T ss_pred cHHHHHHHHHHHHhCCCCeEEEeccCCCchhHHHHHcCCCCchHHHHHHHHhhccCcchhhceEEEEcchHhccccccCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHhCCccceeecCCCcccCCCCCCCCccCChhHHHHHHHHHhhcCCccccceeeeecC--CC-CCHHHHHHHHH
Q 021993 127 KKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIP--CG-PSALAVKEAAW 203 (304)
Q Consensus 127 ~~~~~~L~~kGIvPGIKVDkGl~~l~g~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~--~~-Ps~~aI~~na~ 203 (304)
+||+|+|+++|||||||||||++|++|+++|++|||||+|++||++||++|||||||||||+|+ +. ||..||.+|++
T Consensus 82 ~p~~~~L~~~GIvPgIKVDkGl~~l~G~~~e~~t~GLD~L~~R~~~y~~~GarFAKwRsVi~i~~~~g~PS~~aI~~na~ 161 (355)
T PTZ00019 82 KTFVELLKEKGIVPGIKVDKGLVTLPGTDGETSTQGLDGLAERAKKYYKAGARFAKWRAVLKIDPAKGKPSELAIQENAW 161 (355)
T ss_pred CChHHHHHHCCCeeeEEcCCCccCCCCCCCCccCcChHHHHHHHHHHHhcCCceeeeeeeeeecCCCCCCcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999996 44 99999999999
Q ss_pred HHHHHHHHHHhCCceeeecceecCCCCCCHHHHHHHHHHHHHHHHHHHHhCCcccccccccccccCCCCCCCCCCChHHH
Q 021993 204 GLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETI 283 (304)
Q Consensus 204 ~LAryAaicQ~~GLVPIVEPEVl~dg~h~ie~c~~Vte~vL~~vf~aL~~~~V~LEG~lLKpnMV~pG~~~~~~~~~eeV 283 (304)
.|||||+|||++||||||||||||||||||++|++|||+||++||++|++|||+|||+|||||||+||++|+.+++||+|
T Consensus 162 ~LaryA~icq~~GLVPIVEPEVlidG~H~i~~c~~vte~Vl~~v~~aL~~~~V~lEG~lLKPnMV~pG~~~~~~~s~e~v 241 (355)
T PTZ00019 162 TLARYAAICQENGLVPIVEPEILIDGSHSIEVCQKVTEKVLAEVFKALNDHGVLLEGCLLKPNMVTPGSDCGVKATPQEV 241 (355)
T ss_pred HHHHHHHHHHHcCCCceecccccCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeecCceeccccccCCCcCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCCCCCccC
Q 021993 284 AKYTLTMLKRRVPPAVPGIMV 304 (304)
Q Consensus 284 A~~Tv~~L~rtvP~avpGI~F 304 (304)
|++||++|+||||+|||||+|
T Consensus 242 A~~Tv~~l~rtVP~avPGI~F 262 (355)
T PTZ00019 242 AFYTVRTLSRTVPPALPGVMF 262 (355)
T ss_pred HHHHHHHHHhcCCccCCeeee
Confidence 999999999999999999999
No 7
>PF00274 Glycolytic: Fructose-bisphosphate aldolase class-I; InterPro: IPR000741 Fructose-bisphosphate aldolase (4.1.2.13 from EC) [, ] is a glycolytic enzyme that catalyses the reversible aldol cleavage or condensation of fructose-1,6-bisphosphate into dihydroxyacetone-phosphate and glyceraldehyde 3-phosphate. There are two classes of fructose-bisphosphate aldolases with different catalytic mechanisms: class I enzymes [] do not require a metal ion, and are characterised by the formation of a Schiff base intermediate between a highly conserved active site lysine and a substrate carbonyl group, while the class II enzymes require an active-site divalent metal ion. This entry represents the class I enzymes. In vertebrates, three forms of this enzyme are found: aldolase A is expressed in muscle, aldolase B in liver, kidney, stomach and intestine, and aldolase C in brain, heart and ovary. The different isozymes have different catalytic functions: aldolases A and C are mainly involved in glycolysis, while aldolase B is involved in both glycolysis and gluconeogenesis. Defects in aldolase B result in hereditary fructose intolerance.; GO: 0004332 fructose-bisphosphate aldolase activity, 0006096 glycolysis; PDB: 1EX5_B 6ALD_D 2QUU_B 3DFN_B 1ADO_B 3DFO_A 1ZAL_A 1J4E_C 3DFP_A 1ZAJ_B ....
Probab=100.00 E-value=1.4e-110 Score=802.18 Aligned_cols=254 Identities=63% Similarity=0.982 Sum_probs=232.6
Q ss_pred HHHHHHHHhcCCCCceEeecCCCcchHHHhhhcCCCCchhhhhhhhhhhccCCCCCCceeEEeeccccccccccCCcchH
Q 021993 51 ELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFV 130 (304)
Q Consensus 51 eL~~tA~~i~a~GKGIlA~DES~gt~~Krl~~iGvente~nrr~yR~ll~ttp~~~~~IsGvILfeETl~q~~~dG~~~~ 130 (304)
||.+||++|++|||||||+|||+|||+|||++|||||||+|||+||++|||||++++||||||||||||+|+++||+||+
T Consensus 1 eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gie~te~~r~~yR~~l~tt~~~~~~IsGvILfeeTl~q~~~~G~~~~ 80 (348)
T PF00274_consen 1 ELRATARAIVAPGKGILAADESGGTIPKRLAAYGIENTEENRRAYRELLFTTPGLSEYISGVILFEETLYQKTADGKPFP 80 (348)
T ss_dssp HHHHHHHHHTGTT-EEEEE---HHHHHHHHHHTTS-CGHHHHHHHHHHHHTSGGGGGTEEEEEE-HHHHTSBETTSSBHH
T ss_pred ChHHHHHHHhCCCCcEEEecCCCccHHHHHHHcCCCCchhhHHHHHHhhhcccccccceEEEEcccchhhccccCCCChH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCccceeecCCCcccCCCCCCCCccCChhHHHHHHHHHhhcCCccccceeeeec-CCCCCHHHHHHHHHHHHHHH
Q 021993 131 DCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSI-PCGPSALAVKEAAWGLARYA 209 (304)
Q Consensus 131 ~~L~~kGIvPGIKVDkGl~~l~g~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i-~~~Ps~~aI~~na~~LAryA 209 (304)
++|+++|||||||||||+.|++|+++|++|+|||+|++||++||++||||||||+||+| .+.||..+|.+|++.|||||
T Consensus 81 ~~L~~~GIvpgIKVDkGl~~l~~~~~ek~t~GLD~L~~R~~~y~~~GarFaKwRsVi~i~~~~ps~~~I~~na~~laryA 160 (348)
T PF00274_consen 81 DYLKEKGIVPGIKVDKGLVPLPGGVQEKPTQGLDGLLERCAEYYAFGARFAKWRSVIKIGDGTPSEAAIKANAHQLARYA 160 (348)
T ss_dssp HHHHHTT-EEEEE---EEEEETTSSSEEEEETTTTHHHHHHHHHHTTEEEEEEEEEEESBTTBS-HHHHHHHHHHHHHHH
T ss_pred HHHHhcCceeeEeccCceeccccCCCceeCCCcchHHHHHHHHhhhcccceeeeeeeecCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 56799999999999999999
Q ss_pred HHHHhCCceeeecceecCCCCCCHHHHHHHHHHHHHHHHHHHHhCCcccccccccccccCCCCCCCCCCChHHHHHHHHH
Q 021993 210 AISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLT 289 (304)
Q Consensus 210 aicQ~~GLVPIVEPEVl~dg~h~ie~c~~Vte~vL~~vf~aL~~~~V~LEG~lLKpnMV~pG~~~~~~~~~eeVA~~Tv~ 289 (304)
+|||++||||||||||+|||+|++++|++||++||++||++|++|+|+|||+|||||||+||.+|+.+++|+|||++||+
T Consensus 161 ~icq~~GLVPIVEPEVli~g~h~~~~~~~vt~~vl~~v~~~l~~~~V~Leg~llKpnmv~pG~~~~~~~~~~~vA~~T~~ 240 (348)
T PF00274_consen 161 AICQEAGLVPIVEPEVLIDGDHDIERCAEVTEAVLAAVFKALNDHGVMLEGTLLKPNMVTPGKDHPKKASPEEVAEATVR 240 (348)
T ss_dssp HHHHHTT-EEEEEEEEESSSSTHHHHHHHHHHHHHHHHHHHHHHTTEEGGGEEEEEB-S---TTSSS---HHHHHHHHHH
T ss_pred HHHHhccCccccccccccCCCchHHHHHHHHHHHHHHHHHhhccCEEEeccccccccceeecccCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCCccC
Q 021993 290 MLKRRVPPAVPGIMV 304 (304)
Q Consensus 290 ~L~rtvP~avpGI~F 304 (304)
+|+|+||++||||+|
T Consensus 241 ~l~~~vP~aVpgIvF 255 (348)
T PF00274_consen 241 ALRRTVPAAVPGIVF 255 (348)
T ss_dssp HHHHHSBTTSSEEEE
T ss_pred HHHHhcccccceeEe
Confidence 999999999999998
No 8
>cd00344 FBP_aldolase_I Fructose-bisphosphate aldolase class I. Fructose-1,6-bisphosphate aldolase is an enzyme of the glycolytic and gluconeogenic pathways found in vertebrates, plants, and bacteria. The enzyme catalyzes the cleavage of fructose 1,6-bisphosphate to glyceraldehyde 3-phosphate and dihydroxyacetone phosphate (DHAP). Mutations in the aldolase genes in humans cause hemolytic anemia and hereditary fructose intolerance. The enzyme is a member of the class I aldolase family, which utilizes covalent catalysis through a Schiff base formed between a lysine residue of the enzyme and ketose substrates. Although structurally similar, the class II aldolases use a different mechanism and are believed to have an independent evolutionary origin.
Probab=100.00 E-value=7.3e-109 Score=784.18 Aligned_cols=255 Identities=55% Similarity=0.821 Sum_probs=251.9
Q ss_pred HHHHHHHHHhcCCCCceEeecCCCcchHHHhhhcCCCCchhhhhhhhhhhccC-CCCCCceeEEeeccccccccccCCcc
Q 021993 50 EELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTT-PGLGDYISGAILFEETLYQSTTDGKK 128 (304)
Q Consensus 50 ~eL~~tA~~i~a~GKGIlA~DES~gt~~Krl~~iGvente~nrr~yR~ll~tt-p~~~~~IsGvILfeETl~q~~~dG~~ 128 (304)
+||.+||++|++|||||||+|||+||++|||..+|+||||+|||+||++|||+ |++++||||||||||||||++.||.|
T Consensus 2 ~eL~~~a~~~~~~GKGilAAdEssgt~~kR~~~i~~enteenrr~~r~ll~~~~~~i~~~IsGvILfeeTl~q~~~~g~~ 81 (328)
T cd00344 2 KELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPRIGGVILFHETLYQKADDGRP 81 (328)
T ss_pred hHHHHHHHHhcCCCCeeEEeccCCCcccchhhhCCCCCchhhHHHHHHHHhccCchhhccEEEEEechhhccccCCCCcc
Confidence 69999999999999999999999999999999999999999999999999995 79999999999999999999999999
Q ss_pred hHHHHHhCCccceeecCCCcccCCCCCCCCccCChhHHHHHHHHHhhcCCccccceeeeecCCC-CCHHHHHHHHHHHHH
Q 021993 129 FVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCG-PSALAVKEAAWGLAR 207 (304)
Q Consensus 129 ~~~~L~~kGIvPGIKVDkGl~~l~g~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~-Ps~~aI~~na~~LAr 207 (304)
|+++|+++|||||||||||++|++|.++|++|+|||+|++||++||++|||||||||||+|++. ||..+|.+|++.|||
T Consensus 82 ~~~ll~~~GIvPgIKVDkGl~~l~g~~~ek~t~GLD~L~~R~~~y~~~GarfaKwRsVi~i~~~~Ps~~~I~~na~~lar 161 (328)
T cd00344 82 FPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLAR 161 (328)
T ss_pred HHHHHHhCCCeeeEEecCCcccCCCCCCCccCCChHHHHHHHHHHhhcCCceeeeeeeeecCCCCCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999765 999999999999999
Q ss_pred HHHHHHhCCceeeecceecCCCCCCHHHHHHHHHHHHHHHHHHHHhCCcccccccccccccCCCCCCCCCCChHHHHHHH
Q 021993 208 YAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYT 287 (304)
Q Consensus 208 yAaicQ~~GLVPIVEPEVl~dg~h~ie~c~~Vte~vL~~vf~aL~~~~V~LEG~lLKpnMV~pG~~~~~~~~~eeVA~~T 287 (304)
||++||++||||||||||||||+|+|++|++||++||.++|++|++|+|+|||+|||||||+||++|+.+++||+||.+|
T Consensus 162 yA~~cq~~GLVPIVEPEVlidg~h~i~~~~~vt~~vl~~~~~~L~~~~V~leg~lLKpnmv~~G~~~~~~~~~~~va~~t 241 (328)
T cd00344 162 YASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKFSHEEIAMAT 241 (328)
T ss_pred HHHHHHHCCCCceecceeCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCcccCeEEEccccccCccCCCcCCHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCccC
Q 021993 288 LTMLKRRVPPAVPGIMV 304 (304)
Q Consensus 288 v~~L~rtvP~avpGI~F 304 (304)
|.+|+|+||++||||+|
T Consensus 242 ~~~l~~~vP~aVpgVvf 258 (328)
T cd00344 242 VTALRRTVPPAVTGVTF 258 (328)
T ss_pred HHHHHhhCCCcCCeEEe
Confidence 99999999999999998
No 9
>COG3588 Fructose-1,6-bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.8e-97 Score=693.58 Aligned_cols=254 Identities=47% Similarity=0.694 Sum_probs=249.1
Q ss_pred HHHHHHHHHhcCCCCceEeecCCCcchHHHhhhcCCCCchhhhhhhhhhhccCCCC-CCceeEEeeccccccccccCCcc
Q 021993 50 EELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGL-GDYISGAILFEETLYQSTTDGKK 128 (304)
Q Consensus 50 ~eL~~tA~~i~a~GKGIlA~DES~gt~~Krl~~iGvente~nrr~yR~ll~ttp~~-~~~IsGvILfeETl~q~~~dG~~ 128 (304)
++|.+||.+++++|||++|+|||+||++|||++|||||||+|||.||++||+||+| ++||+|||||||||+|+.++|.|
T Consensus 3 erl~~~a~~~v~nGKG~iAADeS~gt~~krf~~~Gie~te~srrd~Re~l~~s~~~~~~yI~GaILfeeTm~q~~~~g~p 82 (332)
T COG3588 3 ERLNDTALKKVANGKGFIAADESGGTTPKRFDSYGIEETEYSRRDMRERLFTSPDFMEDYILGAILFEETMDQKADGGYP 82 (332)
T ss_pred cchhHHHHHHHhcCCceEeecCCCCchhhHHHHcCCCCchhhhHHHHHHHhcCcccchhhhhheehhHHHHHHhhcCCCC
Confidence 57999999999999999999999999999999999999999999999999999977 99999999999999999999999
Q ss_pred hHHHHHhCCccceeecCCCcccCCCCCCCCccCChhHHHHHHHHHhhcCCccccceeeeecCCC-CCHHHHHHHHHHHHH
Q 021993 129 FVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCG-PSALAVKEAAWGLAR 207 (304)
Q Consensus 129 ~~~~L~~kGIvPGIKVDkGl~~l~g~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~-Ps~~aI~~na~~LAr 207 (304)
++++++++|||||||||||+.|++|.++|++|+|||+|++||++||++|+||||||+||+|.+. ||..+|.+|++.|||
T Consensus 83 ~~~l~~~kgivPgiKvDkGl~~~~g~~~ek~t~gLd~L~~R~~~~~~~GarfaKwRsvI~~~~~~ps~~~I~~nv~~la~ 162 (332)
T COG3588 83 ADYLWKEKGIVPGIKVDKGLKPLAGVQLEKPTEGLDGLLKRAKEYHIFGARFAKWRSVIKIADGIPSWGGIKANVHQLAE 162 (332)
T ss_pred HHHHHHhcCCCcceeecCCcccccCCccccCCcCHHHHHHHHHHhhhccchHHHHHHHHHhccCCCccchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999755 999999999999999
Q ss_pred HHHHHHhCCceeeecceecCCCCCCHHHHHHHHHHHHHHHHHHHHhCCcccccccccccccCCCCCCCCCCChHHHHHHH
Q 021993 208 YAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYT 287 (304)
Q Consensus 208 yAaicQ~~GLVPIVEPEVl~dg~h~ie~c~~Vte~vL~~vf~aL~~~~V~LEG~lLKpnMV~pG~~~~~~~~~eeVA~~T 287 (304)
||++||++||||||||||+|||+||+++|++||+.+|+.+|++|++..|+|+|++||||||++|+.|..+ ||++||+.|
T Consensus 163 yAa~cq~aGlVPIVEPEV~mdg~~d~~~~eeVtk~~L~k~~~~L~~~~vvm~g~~lk~smv~~g~~~~~~-s~~~vae~t 241 (332)
T COG3588 163 YAALCQAAGLVPIVEPEVDIDGDHDKARSEEVTKAELRKLLNALNEERVVMLGLILKTSMVISGKKSREA-SPDEVAEDT 241 (332)
T ss_pred HHHHHHHCCCcccccceeeccCcccHHHHHHHHHHHHHHHHHHhhhhHhHhhcccccchhcccccccccc-chHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999766 999999999
Q ss_pred HHHhccCCCCCCCCccC
Q 021993 288 LTMLKRRVPPAVPGIMV 304 (304)
Q Consensus 288 v~~L~rtvP~avpGI~F 304 (304)
+.+|+.|||.+||||+|
T Consensus 242 l~~~~~tvP~~vpgIvf 258 (332)
T COG3588 242 LYSLLSTVPAVVPGIVF 258 (332)
T ss_pred HHHHHhcCCcccceeEE
Confidence 99999999999999998
No 10
>PRK05377 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=100.00 E-value=2.7e-72 Score=525.18 Aligned_cols=205 Identities=27% Similarity=0.372 Sum_probs=188.1
Q ss_pred CCCCceE-eecCCCcchHHHhhhcCCCCchhhh--------hhhhhhhccCCCC-CCceeEEeeccccccccccCCcchH
Q 021993 61 SPGRGIL-AIDESNATCGKRLASIGLDNTETNR--------QAYRQLLLTTPGL-GDYISGAILFEETLYQSTTDGKKFV 130 (304)
Q Consensus 61 a~GKGIl-A~DES~gt~~Krl~~iGvente~nr--------r~yR~ll~ttp~~-~~~IsGvILfeETl~q~~~dG~~~~ 130 (304)
+|||||+ |+|||+|||||||+.|||||||+|| |+||++|||||+| ++|||||||||||||| ++||+||+
T Consensus 11 ~~GKG~lAAlDeS~GT~~Krl~~~GVente~n~~~eM~~li~~~R~~l~tsp~f~~~~I~GaILFEeTl~q-~~dG~p~~ 89 (296)
T PRK05377 11 KNGKGFIAALDQSGGSTPKALKLYGVEEDAYSNEEEMFDLVHEMRTRIITSPAFTGDKILGAILFEQTMDR-EIEGKPTA 89 (296)
T ss_pred cCCCceEEehhccCCchHHHHHHcCCCCcccccchhHHHHHHHHhhccccCccccccceEEEEcchHhhcC-ccCCcCHH
Confidence 4599977 6999999999999999999999996 9999999999996 9999999999999999 89999999
Q ss_pred HHHHh-CCccceeecCCCcccCCCCCC---CCccCChhHHHHHHHHHhhcCCccccceeeeecCCCCCHHHHHHHHHHHH
Q 021993 131 DCLRE-EKIVPGIKVDKGLVPLPGSNN---ESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLA 206 (304)
Q Consensus 131 ~~L~~-kGIvPGIKVDkGl~~l~g~~g---e~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~Ps~~aI~~na~~LA 206 (304)
++||+ +|||||||||||++|++ +| |++|||||+|++||++|+ ++||||||||+|+ +..+|.+|++.||
T Consensus 90 d~L~e~kGIVPgIKVDKGl~~l~--~gvql~k~~~GLD~Ll~R~~~y~---~~GaKwRsViki~---~~~~I~~na~qla 161 (296)
T PRK05377 90 DYLWEKKGVVPFLKVDKGLAEEA--NGVQLMKPIPNLDDLLDRAVEKG---IFGTKMRSVIKEA---NEQGIAAVVAQQF 161 (296)
T ss_pred HHHHhcCCcceEEEecCCcccCC--CCccccccCCCHHHHHHHHHHhC---CCccceeeeecCC---CHHHHHHHHHHHH
Confidence 99998 99999999999999998 57 678999999999999994 6679999999996 4899999999999
Q ss_pred HHHHHHHhCCceeeecceecCCCCCCHHHHHHHHHHHHHHHHHHHH-hCCccccccccc-ccccCCCCCCC
Q 021993 207 RYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLA-ENNVVLEGILLK-PSMVTPGAEHK 275 (304)
Q Consensus 207 ryAaicQ~~GLVPIVEPEVl~dg~h~ie~c~~Vte~vL~~vf~aL~-~~~V~LEG~lLK-pnMV~pG~~~~ 275 (304)
|||++||++||||||||||+|||. |-+.|.++..+.+.+.++.|. ++.|.|..+|.. +|...+=.++|
T Consensus 162 ryA~~~q~~GLVPIVEPEVli~~~-~k~~~e~~l~~~i~~~l~~l~~~~~vmlkltlp~~~~~Y~~l~~hp 231 (296)
T PRK05377 162 EVAKQILAAGLVPIIEPEVDINSP-DKAEAEAILKAEILKQLDALPEDQQVMLKLTIPTEANLYKELIDHP 231 (296)
T ss_pred HHHHHHHHcCCCceECCeECCCCc-CHHHHHHHHHHHHHHHHhhCCCCCeEEEEEecCCCCCcchhhccCC
Confidence 999999999999999999999999 888999999999999999998 588999999875 45555444443
No 11
>cd00949 FBP_aldolase_I_bact Fructose-1.6-bisphosphate aldolase found in gram +/- bacteria. The enzyme catalyzes the cleavage of fructose 1,6-bisphosphate to glyceraldehyde 3-phosphate and dihydroxyacetone phosphate (DHAP). The enzyme is member of the class I aldolase family, which utilizes covalent catalysis through a Schiff base formed between a lysine residue of the enzyme and ketose substrates.
Probab=100.00 E-value=2.5e-67 Score=491.06 Aligned_cols=200 Identities=32% Similarity=0.420 Sum_probs=172.5
Q ss_pred CCCCceE-eecCCCcchHHHhhhcCCCCc-----hhhh---hhhhhhhccCCCC-CCceeEEeeccccccccccCCcchH
Q 021993 61 SPGRGIL-AIDESNATCGKRLASIGLDNT-----ETNR---QAYRQLLLTTPGL-GDYISGAILFEETLYQSTTDGKKFV 130 (304)
Q Consensus 61 a~GKGIl-A~DES~gt~~Krl~~iGvent-----e~nr---r~yR~ll~ttp~~-~~~IsGvILfeETl~q~~~dG~~~~ 130 (304)
.+||||+ |+|||+|||||||++|||||| |+|| |+||++|||||+| ++||||||||||||+|+ +||+||+
T Consensus 8 ~~GKGilAAlDES~GT~~Krl~~iGVent~y~~eee~r~~ih~~R~~lftsp~f~~~~IsGaILFEeTl~q~-~dG~p~~ 86 (292)
T cd00949 8 KSGKGFIAALDQSGGSTPKALAAYGIEEDAYSNEEEMFDLVHEMRTRIITSPAFDGDKILGAILFEQTMDRE-IEGKPTA 86 (292)
T ss_pred cCCCceEEehhccCCchHHHHHHcCCCCCCCCChHHHHHHHHHHhhccccCccccccceEEEEccHHhhcCc-cCCcCHH
Confidence 4599977 999999999999999999999 8888 5999999999996 99999999999999987 8999999
Q ss_pred HHHHhCC-ccceeecCCCcccCCCCCCCC---ccCChhHHHHHHHHHhhcCCccccceeeeecCCCCCHHHHHHHHHHHH
Q 021993 131 DCLREEK-IVPGIKVDKGLVPLPGSNNES---WCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLA 206 (304)
Q Consensus 131 ~~L~~kG-IvPGIKVDkGl~~l~g~~ge~---~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~Ps~~aI~~na~~LA 206 (304)
++||++| ||||||||||++|++ +||+ +|+|||+|++||++|+ ++||||||||+|++.||+.+|++|||.|
T Consensus 87 d~L~e~ggIVPgIKVDKGl~~la--~Ge~lmk~~~GLD~Ll~R~~~~~---~~GaKwRsVIki~~~~~i~aiv~qq~~l- 160 (292)
T cd00949 87 DYLWEKKQIVPFLKVDKGLAEEK--NGVQLMKPIPNLDELLMRAKEKG---VFGTKMRSVIKEANPKGIAAVVDQQFEL- 160 (292)
T ss_pred HHHHhcCCeeeEEEecCCcccCC--CCcccCcCCccHHHHHHHHHHhC---CCCcceeeEeecCCcchHHHHHHHHHHH-
Confidence 9999875 999999999999998 6888 7889999999999985 6669999999999999999999999998
Q ss_pred HHHHHHHhCCceeeecceecCCCCCCHHHHHHHHHHHHHHHHHHHH-hCCcccccccc-cccccCC
Q 021993 207 RYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLA-ENNVVLEGILL-KPSMVTP 270 (304)
Q Consensus 207 ryAaicQ~~GLVPIVEPEVl~dg~h~ie~c~~Vte~vL~~vf~aL~-~~~V~LEG~lL-KpnMV~p 270 (304)
|++||++||||||||||+||.++ =+.|.++....+..-.+.|. ++.|.|.=+|- ++|+..+
T Consensus 161 --A~~cq~~GLVPIVEPEVli~~~~-k~~~e~~l~~~i~~~l~~l~~~~~vmlkltlp~~~~~y~~ 223 (292)
T cd00949 161 --AKQILSHGLVPIIEPEVDIHSAD-KAKCEAILKAEILKHLDKLPEGQQVMLKLTLPTEANFYSE 223 (292)
T ss_pred --HHHHHHcCCCceECceECCCCcc-HHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCCcChhHH
Confidence 67799999999999999999764 44566666666666666664 36677754442 3444433
No 12
>PRK04161 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=93.90 E-value=1.7 Score=43.04 Aligned_cols=202 Identities=14% Similarity=0.134 Sum_probs=115.3
Q ss_pred HHhcCCCCc---eEeecCCCcchHHHhhhcC-CCCchhhhhhhhhhhccCCCCCCceeEEeeccccccccccCCcchHHH
Q 021993 57 KTIASPGRG---ILAIDESNATCGKRLASIG-LDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDC 132 (304)
Q Consensus 57 ~~i~a~GKG---IlA~DES~gt~~Krl~~iG-vente~nrr~yR~ll~ttp~~~~~IsGvILfeETl~q~~~dG~~~~~~ 132 (304)
++|.. .+| +||+||- |++-|-|+..+ -+.+.+.=..+-.++ +..|..|-|++ |.|.-+. -|=...
T Consensus 12 ~~ls~-~~G~i~aLAiDQR-gslkkm~a~~~~~~~~~~~i~~fK~lv--s~~Ltp~ASaI-LlDpeyg------lpa~~~ 80 (329)
T PRK04161 12 EKVSN-SQGIISALAFDQR-GALKRMMAAHQEGEATVTQIETLKVLV--SEELTPYASSI-LLDPEYG------LPATKV 80 (329)
T ss_pred HHhcC-CCCCEEEEEecch-HHHHHHHHhcCCCCCcHHHHHHHHHHH--HHHhhhhccee-eeccccC------ccchhc
Confidence 34544 566 8999998 57888888876 333334445566555 44677787774 5554442 111222
Q ss_pred H-HhCCccceeecCCCcccCCCCCCCCccCChhHHHH--HHHHHhhcCCccccceeeeecCCCCCHHHHHH-HHHHHHHH
Q 021993 133 L-REEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLAS--RSTEYYKQGARFAKWRTVVSIPCGPSALAVKE-AAWGLARY 208 (304)
Q Consensus 133 L-~~kGIvPGIKVDkGl~~l~g~~ge~~t~GLD~L~~--R~~~y~~~Ga~FaKWRsVi~i~~~Ps~~aI~~-na~~LAry 208 (304)
+ .+.|.+-.. +-.|. +++...-|++|++ -.++.+++|+.+.|-=--+..+..| +|.+ +..-+-|.
T Consensus 81 ~~~~~GLllay-------EktGy-D~~~~gRl~~ll~~ws~~rike~GadavK~Llyy~pD~~~---ein~~k~a~verv 149 (329)
T PRK04161 81 RANQTGLLLAY-------EKTGY-DATTTSRLPDCLVEWSVKRLKEAGADAVKFLLYYDVDGDE---EINDQKQAYIERI 149 (329)
T ss_pred cCCCCceEEee-------cccCc-ccCCCCccccccchhhHHHHHHhCCCeEEEEEEECCCCCH---HHHHHHHHHHHHH
Confidence 2 234444331 11121 2333334666653 3445567899998865544444444 3433 44456778
Q ss_pred HHHHHhCCceeeecceec---CCCCCCHHHHHHHHHHHHHHHHHHHHh--CCcccccccccc------cccCCCCCC-CC
Q 021993 209 AAISQDNGLVPIVEPEIL---LDGDHPIERTLEVAEKVWSEVFFYLAE--NNVVLEGILLKP------SMVTPGAEH-KE 276 (304)
Q Consensus 209 AaicQ~~GLVPIVEPEVl---~dg~h~ie~c~~Vte~vL~~vf~aL~~--~~V~LEG~lLKp------nMV~pG~~~-~~ 276 (304)
.+-|.++||-=++||=+- ++..++.+.+..--++|+.. .+.+.+ .||++ ||- |+| -|... ..
T Consensus 150 g~eC~a~dipf~lE~l~Yd~~~~d~~~~eyak~kP~~V~~a-mkefs~~~~gvDV----lKvEvPvn~~~v-eG~~~g~~ 223 (329)
T PRK04161 150 GSECTAEDIPFFLELLTYDERISDNNSAAYAKLKPHKVNGA-MKVFSDKRFGVDV----LKVEVPVNMAYV-EGFTEGEV 223 (329)
T ss_pred HHHHHHCCCCeEEEEeccCCcccccccHHHHhhChHHHHHH-HHHhccCCCCCcE----EEEecccccccc-cccCcccc
Confidence 888999999999998663 23344555544435666664 588885 77765 775 334 23222 34
Q ss_pred CCChHHHHHH
Q 021993 277 KASPETIAKY 286 (304)
Q Consensus 277 ~~~~eeVA~~ 286 (304)
.+|-+|.+.+
T Consensus 224 ~yt~~eA~~~ 233 (329)
T PRK04161 224 VYSQEEAIKA 233 (329)
T ss_pred cccHHHHHHH
Confidence 5677776443
No 13
>PRK12399 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=93.67 E-value=2.1 Score=42.30 Aligned_cols=198 Identities=16% Similarity=0.179 Sum_probs=112.9
Q ss_pred HhcCCCCc---eEeecCCCcchHHHhhhcCCCC-chhhhhhhhhhhccCCCCCCceeEEeeccccccccccCCcchHHHH
Q 021993 58 TIASPGRG---ILAIDESNATCGKRLASIGLDN-TETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCL 133 (304)
Q Consensus 58 ~i~a~GKG---IlA~DES~gt~~Krl~~iGven-te~nrr~yR~ll~ttp~~~~~IsGvILfeETl~q~~~dG~~~~~~L 133 (304)
+|.. .+| +||+||- |++-|-|+..+-+. +.+.=..+-.++ +..|..|-|++.| |.-+ |-|-.+.+
T Consensus 11 ~ls~-~~G~i~aLA~DQR-gslkkm~a~~~~~~~~~~~i~~fK~lv--s~~Ltp~ASaILl-Dpey------glpa~~~~ 79 (324)
T PRK12399 11 KLSN-ENGIISALAFDQR-GALKRMMAQHQTEEPTVAQIEELKVLV--SEELTPYASSILL-DPEY------GLPASKAR 79 (324)
T ss_pred HhcC-CCCCEEEEEeccH-HHHHHHHHhccCCCCCHHHHHHHHHHH--HHHhccccceeee-cccc------Cchhhccc
Confidence 4444 556 8999998 57888898886332 444445566665 3456678887555 4433 22222223
Q ss_pred -HhCCccceeecCCCcccCCCCCCCCccCC-hhHHHH--HHHHHhhcCCccccceeeeecCCCCCHHHHHHH-HHHHHHH
Q 021993 134 -REEKIVPGIKVDKGLVPLPGSNNESWCQG-LDGLAS--RSTEYYKQGARFAKWRTVVSIPCGPSALAVKEA-AWGLARY 208 (304)
Q Consensus 134 -~~kGIvPGIKVDkGl~~l~g~~ge~~t~G-LD~L~~--R~~~y~~~Ga~FaKWRsVi~i~~~Ps~~aI~~n-a~~LAry 208 (304)
++.|.+-.. +-.|. +..++| |++|.. -.++.+++|+.+.|-=--+..+..| +|.++ ..-+-|.
T Consensus 80 ~~~~GLllay-------EktGy--D~~~~gRl~~ll~~wS~~rike~GadavK~Llyy~pD~~~---~in~~k~a~verv 147 (324)
T PRK12399 80 DEDAGLLLAY-------EKTGY--DATTTGRLPDCLDDWSAKRIKEEGADAVKFLLYYDVDEPD---EINEQKKAYIERI 147 (324)
T ss_pred CcCCceEEEe-------hhhCC--ccCCCCCcccccchhhHHHHHHhCCCeEEEEEEECCCCCH---HHHHHHHHHHHHH
Confidence 334444431 11121 233444 555543 2234456899988865444443333 34443 4456778
Q ss_pred HHHHHhCCceeeecceecC---CCCCCHHHHHHH-HHHHHHHHHHHHHh--CCcccccccccc----c--ccCCCCCC-C
Q 021993 209 AAISQDNGLVPIVEPEILL---DGDHPIERTLEV-AEKVWSEVFFYLAE--NNVVLEGILLKP----S--MVTPGAEH-K 275 (304)
Q Consensus 209 AaicQ~~GLVPIVEPEVl~---dg~h~ie~c~~V-te~vL~~vf~aL~~--~~V~LEG~lLKp----n--MV~pG~~~-~ 275 (304)
.+-|.++||-=++||=+-- +..++.+- +++ -++|+. -.+.+.+ .||++ ||- | +| -|... .
T Consensus 148 g~eC~a~dipf~lE~ltY~~~~~d~~~~~y-ak~kP~~V~~-a~kefs~~~~gvDV----lKvEvPvn~~~v-eG~~~~e 220 (324)
T PRK12399 148 GSECVAEDIPFFLEILTYDEKIADNGSVEY-AKVKPHKVNE-AMKVFSKPRFGVDV----LKVEVPVNMKYV-EGFAEGE 220 (324)
T ss_pred HHHHHHCCCCeEEEEeeccCcccccccHHH-HhhChHHHHH-HHHHhccCCCCCcE----EEEecccccccc-cccCccc
Confidence 8889999999999997743 23445544 555 566655 5788866 77765 775 3 34 34322 3
Q ss_pred CCCChHHHHH
Q 021993 276 EKASPETIAK 285 (304)
Q Consensus 276 ~~~~~eeVA~ 285 (304)
..+|-+|.+.
T Consensus 221 ~~yt~~eA~~ 230 (324)
T PRK12399 221 VVYTKEEAAQ 230 (324)
T ss_pred ccccHHHHHH
Confidence 3557666554
No 14
>TIGR01232 lacD tagatose 1,6-diphosphate aldolase. This family consists of Gram-positive proteins. Tagatose 1,6-diphosphate aldolase is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation.
Probab=93.49 E-value=1 Score=44.47 Aligned_cols=202 Identities=17% Similarity=0.175 Sum_probs=115.7
Q ss_pred HHhcCCCCc---eEeecCCCcchHHHhhhcCCCC-chhhhhhhhhhhccCCCCCCceeEEeeccccccccccCCcchHHH
Q 021993 57 KTIASPGRG---ILAIDESNATCGKRLASIGLDN-TETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDC 132 (304)
Q Consensus 57 ~~i~a~GKG---IlA~DES~gt~~Krl~~iGven-te~nrr~yR~ll~ttp~~~~~IsGvILfeETl~q~~~dG~~~~~~ 132 (304)
++|.. .+| +||+||- |++-|-|+..+-+. +.+.=..+-.++ +..|..|-|++.|-+| + |-|-.+.
T Consensus 11 ~~ls~-~~G~i~aLAiDQR-gslkkm~a~~~~~~~~~~~i~~fK~lv--s~~LtpyASaILlDpe-y------glpa~~~ 79 (325)
T TIGR01232 11 EQLSN-NEGIISALAFDQR-GALKRLMAKHQTEEPTVAQIEQLKVLV--AEELTQYASSILLDPE-Y------GLPASDA 79 (325)
T ss_pred HHhcC-CCCCEEEEEecch-HHHHHHHHhcCCCCCcHHHHHHHHHHH--HHHhccccceEeEccc-c------Ccchhhc
Confidence 34444 556 8999998 57888888886332 434445556555 4456778888555444 3 2222233
Q ss_pred H-HhCCccceeecCCCcccCCCCCCCCccCChhHHHHH--HHHHhhcCCccccceeeeecCCCCCHHHHHH-HHHHHHHH
Q 021993 133 L-REEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASR--STEYYKQGARFAKWRTVVSIPCGPSALAVKE-AAWGLARY 208 (304)
Q Consensus 133 L-~~kGIvPGIKVDkGl~~l~g~~ge~~t~GLD~L~~R--~~~y~~~Ga~FaKWRsVi~i~~~Ps~~aI~~-na~~LAry 208 (304)
+ ++.|.+-. .|| .|. +++...-|++|+.- .++.+++|+.+.|-=--+..+..| .|.+ +..-+-|.
T Consensus 80 ~~~~~GLlla--yEk-----tGy-d~~~~gRl~~ll~~~s~~rike~GadavK~Llyy~pD~~~---ein~~k~a~verv 148 (325)
T TIGR01232 80 RNKDCGLLLA--YEK-----TGY-DVNAKGRLPDCLVEWSAKRLKEQGANAVKFLLYYDVDDAE---EINIQKKAYIERI 148 (325)
T ss_pred cCcCCceEEE--eHh-----hCC-cCCCCCcCccccccccHHHHHHhCCCeEEEEEEeCCCCCh---HHHHHHHHHHHHH
Confidence 3 34555544 222 221 22222245655333 345566899988865444444334 3333 44556788
Q ss_pred HHHHHhCCceeeecceec---CCCCCCHHHHHHH-HHHHHHHHHHHHHh--CCcccccccccccccCC-----CCCC-CC
Q 021993 209 AAISQDNGLVPIVEPEIL---LDGDHPIERTLEV-AEKVWSEVFFYLAE--NNVVLEGILLKPSMVTP-----GAEH-KE 276 (304)
Q Consensus 209 AaicQ~~GLVPIVEPEVl---~dg~h~ie~c~~V-te~vL~~vf~aL~~--~~V~LEG~lLKpnMV~p-----G~~~-~~ 276 (304)
.+-|.++||-=++||=+- +...++.+- +++ -++|+. -.+.+.+ .||++ ||--|=.. |... ..
T Consensus 149 g~ec~a~dipf~lE~ltYd~~~~~~~~~~y-ak~kP~~V~~-a~kefs~~~~gvDV----lKvEvPvn~~~veG~~~~e~ 222 (325)
T TIGR01232 149 GSECVAEDIPFFLEVLTYDDNIPDNGSVEF-AKVKPRKVNE-AMKLFSEPRFNVDV----LKVEVPVNVKYVEGFAEGEV 222 (325)
T ss_pred HHHHHHCCCCeEEEEeccCCCCCCCCcHHH-HHhChHHHHH-HHHHhccCCCCCcE----EEEecccccccccccCcccc
Confidence 889999999999998765 223445554 344 556655 5788888 78875 77554333 3222 23
Q ss_pred CCChHHHHHH
Q 021993 277 KASPETIAKY 286 (304)
Q Consensus 277 ~~~~eeVA~~ 286 (304)
.+|-+|.+.+
T Consensus 223 ~yt~~eA~~~ 232 (325)
T TIGR01232 223 VYTKEEAAQH 232 (325)
T ss_pred cccHHHHHHH
Confidence 4566665443
No 15
>PRK12858 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=77.50 E-value=53 Score=32.53 Aligned_cols=179 Identities=17% Similarity=0.103 Sum_probs=90.5
Q ss_pred CCCc-eEeecCCCcchHHHhhhc-CCCCchhhhhhhhhhhccCCCCCCceeEEeeccccccccccCCcchHHHHHhCCcc
Q 021993 62 PGRG-ILAIDESNATCGKRLASI-GLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIV 139 (304)
Q Consensus 62 ~GKG-IlA~DES~gt~~Krl~~i-Gvente~nrr~yR~ll~ttp~~~~~IsGvILfeETl~q~~~dG~~~~~~L~~kGIv 139 (304)
+|+= ++|+|+ -|.+.|-++.. |-+-+.+.=..+.+++.. .+..+.+|++|.. ++..... .....+.|++
T Consensus 17 ~G~~~~lAiDH-rG~l~~m~~~~~~~~~~~~~l~~~K~lv~~--~l~~~asaILld~-~yG~~a~-----~~~~~~~GLi 87 (340)
T PRK12858 17 RGVIAAAAMDQ-RGSLKKMLAKARGDEASYTDLVDFKLAVSE--ALTPYASAILLDP-EYGLPAA-----KVRDPNCGLL 87 (340)
T ss_pred CCCEEEEecCC-ccHHHHHHHhccccCcchhhHHHHHHHHHH--HHhhCCCEEEEcc-ccChhhh-----cccCCCCCeE
Confidence 4555 999999 67888777652 112222222455555533 3344567766654 3321110 1111456666
Q ss_pred ceeecCCCcccCCCCCCCCccCC-hhHH-----HHHHHHHhhcCCccccceeeeecCCCCCHHHHH-HHHHHHHHHHHHH
Q 021993 140 PGIKVDKGLVPLPGSNNESWCQG-LDGL-----ASRSTEYYKQGARFAKWRTVVSIPCGPSALAVK-EAAWGLARYAAIS 212 (304)
Q Consensus 140 PGIKVDkGl~~l~g~~ge~~t~G-LD~L-----~~R~~~y~~~Ga~FaKWRsVi~i~~~Ps~~aI~-~na~~LAryAaic 212 (304)
-. +|+ .|. +.+ +.| ++++ .+++ .++||..-|--..+.... ..+|. +|...|+|-..-|
T Consensus 88 l~--~e~-----tg~-d~t-~~gr~~~~~~~~sve~a---~~~GAdAVk~lv~~~~d~---~~~~~~~~~~~l~rv~~ec 152 (340)
T PRK12858 88 LS--YEK-----TGY-DAT-APGRLPDLLDNWSVRRI---KEAGADAVKLLLYYRPDE---DDAINDRKHAFVERVGAEC 152 (340)
T ss_pred EE--ecc-----ccc-ccC-CCCCCccccccccHHHH---HHcCCCEEEEEEEeCCCc---chHHHHHHHHHHHHHHHHH
Confidence 55 443 110 011 111 2222 2444 457888666543333211 22333 3444789999999
Q ss_pred HhCCceeeecceecCCCCCCHH--HHHHHHHHHHHHHHHHHH--hCCccccccccccccc
Q 021993 213 QDNGLVPIVEPEILLDGDHPIE--RTLEVAEKVWSEVFFYLA--ENNVVLEGILLKPSMV 268 (304)
Q Consensus 213 Q~~GLVPIVEPEVl~dg~h~ie--~c~~Vte~vL~~vf~aL~--~~~V~LEG~lLKpnMV 268 (304)
++.|+-=++||=+...|..+-+ +-+++.-..+....+.+. +.|++ +||-.+-
T Consensus 153 ~~~giPlllE~l~y~~~~~~~~~~~~a~~~p~~V~~a~r~~~~~elGaD----vlKve~p 208 (340)
T PRK12858 153 RANDIPFFLEPLTYDGKGSDKKAEEFAKVKPEKVIKTMEEFSKPRYGVD----VLKVEVP 208 (340)
T ss_pred HHcCCceEEEEeccCCCccccccccccccCHHHHHHHHHHHhhhccCCe----EEEeeCC
Confidence 9999988997544444322111 112233334455667777 48885 4676543
No 16
>cd07941 DRE_TIM_LeuA3 Desulfobacterium autotrophicum LeuA3 and related proteins, N-terminal catalytic TIM barrel domain. Desulfobacterium autotrophicum LeuA3 is sequence-similar to alpha-isopropylmalate synthase (LeuA) but its exact function is unknown. Members of this family have an N-terminal TIM barrel domain that belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of in
Probab=47.25 E-value=97 Score=29.11 Aligned_cols=82 Identities=18% Similarity=0.237 Sum_probs=53.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCC-CCCHHHHHHHHHHHHHHHHHHHHhCCcccccccccccccCCCC
Q 021993 194 SALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDG-DHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGA 272 (304)
Q Consensus 194 s~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~dg-~h~ie~c~~Vte~vL~~vf~aL~~~~V~LEG~lLKpnMV~pG~ 272 (304)
+.....++...+.+| +.+.|+-..+-+|-++|+ .|+.+...++.+++ .+.|+.- +.= .
T Consensus 113 ~~~~~~~~~~~~i~~---ak~~G~~v~~~~~~~~d~~~~~~~~~~~~~~~~--------~~~g~~~---------i~l-~ 171 (273)
T cd07941 113 TLEENLAMIRDSVAY---LKSHGREVIFDAEHFFDGYKANPEYALATLKAA--------AEAGADW---------LVL-C 171 (273)
T ss_pred CHHHHHHHHHHHHHH---HHHcCCeEEEeEEeccccCCCCHHHHHHHHHHH--------HhCCCCE---------EEE-e
Confidence 444556666677777 578998777778888887 77777766655554 3334321 111 2
Q ss_pred CCCCCCChHHHHHHHHHHhccCCCC
Q 021993 273 EHKEKASPETIAKYTLTMLKRRVPP 297 (304)
Q Consensus 273 ~~~~~~~~eeVA~~Tv~~L~rtvP~ 297 (304)
|.....+|++|+.. ++.|++.+|-
T Consensus 172 DT~G~~~P~~v~~l-v~~l~~~~~~ 195 (273)
T cd07941 172 DTNGGTLPHEIAEI-VKEVRERLPG 195 (273)
T ss_pred cCCCCCCHHHHHHH-HHHHHHhCCC
Confidence 44557899998765 5777777763
No 17
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=43.52 E-value=21 Score=29.86 Aligned_cols=36 Identities=31% Similarity=0.366 Sum_probs=22.5
Q ss_pred HHHHHHHHhCCcccccccccccccCCCCCCCCCCChHHHHHHHHHHhccCCCCC
Q 021993 245 SEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPA 298 (304)
Q Consensus 245 ~~vf~aL~~~~V~LEG~lLKpnMV~pG~~~~~~~~~eeVA~~Tv~~L~rtvP~a 298 (304)
..|=.-..++||.= .|+|.|| |+++| ++|.|.||--
T Consensus 23 ~~v~~i~~~~gI~d------iN~IKPG-----------IgEaT-RvLLRRvP~~ 58 (100)
T PF15608_consen 23 AEVERIAERYGISD------INLIKPG-----------IGEAT-RVLLRRVPWK 58 (100)
T ss_pred HHHHHHHHHhCCCC------cccccCC-----------hhHHH-HHHHhcCCCE
Confidence 33333344555543 7999999 66666 6666778843
No 18
>PF01261 AP_endonuc_2: Xylose isomerase-like TIM barrel; InterPro: IPR012307 This TIM alpha/beta barrel structure is found in xylose isomerase (P19148 from SWISSPROT) and in endonuclease IV (P12638 from SWISSPROT, 3.1.21.2 from EC). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae []. ; PDB: 3KWS_B 3DX5_A 3CQH_B 3CQI_A 3CQK_A 3CQJ_B 2G0W_B 1DXI_A 2ZDS_D 3TVA_B ....
Probab=39.78 E-value=1.7e+02 Score=24.52 Aligned_cols=80 Identities=18% Similarity=0.148 Sum_probs=41.8
Q ss_pred hhHHHHHHHHHhhcCCccccceeee-ec-CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCCCC--HHHHHH
Q 021993 163 LDGLASRSTEYYKQGARFAKWRTVV-SI-PCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHP--IERTLE 238 (304)
Q Consensus 163 LD~L~~R~~~y~~~Ga~FaKWRsVi-~i-~~~Ps~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~dg~h~--ie~c~~ 238 (304)
++.+.+.+...+.+|++.-..-+.- .. ...............|.+.+.++.+.|+...+||.--...+.. ++...+
T Consensus 70 ~~~~~~~i~~a~~lg~~~i~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~ 149 (213)
T PF01261_consen 70 LEYLKKAIDLAKRLGAKYIVVHSGRYPSGPEDDTEENWERLAENLRELAEIAEEYGVRIALENHPGPFSETPFSVEEIYR 149 (213)
T ss_dssp HHHHHHHHHHHHHHTBSEEEEECTTESSSTTSSHHHHHHHHHHHHHHHHHHHHHHTSEEEEE-SSSSSSSEESSHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCceeecCcccccccCCCHHHHHHHHHHHHHHHHhhhhhhcceEEEecccCccccchhhHHHHHH
Confidence 5555555555555676542222110 01 1123334555555566666666889999999999765543222 245444
Q ss_pred HHHH
Q 021993 239 VAEK 242 (304)
Q Consensus 239 Vte~ 242 (304)
+-++
T Consensus 150 ~l~~ 153 (213)
T PF01261_consen 150 LLEE 153 (213)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 4443
No 19
>PF11285 DUF3086: Protein of unknown function (DUF3086); InterPro: IPR021437 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=39.23 E-value=29 Score=33.85 Aligned_cols=49 Identities=33% Similarity=0.495 Sum_probs=34.7
Q ss_pred hhhhhhhhh-ccCCCCCCceeEEeeccc--cccccccCCcchHHHHHhCCccceeecCCC
Q 021993 91 NRQAYRQLL-LTTPGLGDYISGAILFEE--TLYQSTTDGKKFVDCLREEKIVPGIKVDKG 147 (304)
Q Consensus 91 nrr~yR~ll-~ttp~~~~~IsGvILfeE--Tl~q~~~dG~~~~~~L~~kGIvPGIKVDkG 147 (304)
.||-.-+.| ++-++|+-. +|++|||. -|-|| +|.|.++|-+|.|=+|..
T Consensus 204 WRRGLQDcLGi~R~DFGP~-~GivLFE~~daL~qr-------ADRL~~~~~lPlIiID~a 255 (283)
T PF11285_consen 204 WRRGLQDCLGISREDFGPN-SGIVLFERPDALIQR-------ADRLEERGELPLIIIDAA 255 (283)
T ss_pred HHHHHHHhhCCCccccCCC-cceEEeeCcHHHHHH-------HHHHHhcCCCCEEEEccc
Confidence 444444544 334667543 79999984 56666 588999999999999854
No 20
>smart00832 C8 C8 domain. This domain contains 8 conserved cysteine residues, but this family only contains 7 of them to overlaps with other domains. It is found in disease-related proteins including von Willebrand factor, Alpha tectorin, Zonadhesin and Mucin.
Probab=33.51 E-value=33 Score=26.55 Aligned_cols=17 Identities=35% Similarity=0.474 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHhCCce
Q 021993 202 AWGLARYAAISQDNGLV 218 (304)
Q Consensus 202 a~~LAryAaicQ~~GLV 218 (304)
...|+.||..|++.|+.
T Consensus 49 C~al~aYa~aC~~~Gv~ 65 (76)
T smart00832 49 CDALAAYAAACAEAGVC 65 (76)
T ss_pred CHHHHHHHHHHHHCcCc
Confidence 67899999999999964
No 21
>PF08742 C8: C8 domain; InterPro: IPR014853 The proteins in this entry contained a domain rich in positionally conserved cysteine residues. Most proteins contains 7 or 8 cysteine residues. The domain is found in disease-related proteins including von Willebrand factor, Alpha tectorin, Zonadhesin and Mucin. It is often found on proteins containing IPR001846 from INTERPRO and IPR002919 from INTERPRO.
Probab=32.82 E-value=35 Score=25.53 Aligned_cols=19 Identities=26% Similarity=0.295 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHhCCcee
Q 021993 201 AAWGLARYAAISQDNGLVP 219 (304)
Q Consensus 201 na~~LAryAaicQ~~GLVP 219 (304)
-...|+.||+.|+..|+.+
T Consensus 46 ~C~~l~~Ya~~C~~~g~~~ 64 (74)
T PF08742_consen 46 LCEALSAYARECQRAGICV 64 (74)
T ss_pred hhHHHHHHHHHHHHCcCCC
Confidence 3678999999999999864
No 22
>cd06287 PBP1_LacI_like_8 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=30.96 E-value=3.9e+02 Score=23.96 Aligned_cols=167 Identities=17% Similarity=0.131 Sum_probs=87.7
Q ss_pred CCceeEEeeccccccccccCCcchHHHHHhCCccceeecCCCcccCCCCCCCCccCChhHHHHHHHHHhhcCCcccccee
Q 021993 106 GDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRT 185 (304)
Q Consensus 106 ~~~IsGvILfeETl~q~~~dG~~~~~~L~~kGIvPGIKVDkGl~~l~g~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRs 185 (304)
...+-|+|++..... .+..+.|.+.+ +|.|=+|.-...-.+.+- -.+..-++-..-+....+.|. |.
T Consensus 54 ~~~vdgiIi~~~~~~------~~~~~~l~~~~-iPvV~i~~~~~~~~~~~~-V~~d~~~~~~~a~~~L~~~G~-----~~ 120 (269)
T cd06287 54 ALDIDGAILVEPMAD------DPQVARLRQRG-IPVVSIGRPPGDRTDVPY-VDLQSAATARMLLEHLRAQGA-----RQ 120 (269)
T ss_pred ccCcCeEEEecCCCC------CHHHHHHHHcC-CCEEEeCCCCCCCCCCCe-EeeCcHHHHHHHHHHHHHcCC-----Cc
Confidence 457999999853321 12334555554 588878764320111110 112222332333334445564 34
Q ss_pred eeecCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCCCCHHHHHHHHHHHHH-----------------HHH
Q 021993 186 VVSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWS-----------------EVF 248 (304)
Q Consensus 186 Vi~i~~~Ps~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~dg~h~ie~c~~Vte~vL~-----------------~vf 248 (304)
+.-+.+.+..... ...+.-|-..|.++|+-+.+ +.+.++.+.+...+.+++.|. .++
T Consensus 121 I~~i~~~~~~~~~---~~R~~gf~~a~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d~~A~gvl 194 (269)
T cd06287 121 IALIVGSARRNSY---LEAEAAYRAFAAEHGMPPVV---LRVDEAGGEEAGYAACAQLLAQHPDLDALCVPVDAFAVGAV 194 (269)
T ss_pred EEEEeCCcccccH---HHHHHHHHHHHHHcCCCcce---eEecCCCChHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHH
Confidence 5445322211111 22344466668899975421 223455666666666666553 477
Q ss_pred HHHHhCCcccccc---------cccccccCCCCCCCCCCChHHHHHHHHHHhcc
Q 021993 249 FYLAENNVVLEGI---------LLKPSMVTPGAEHKEKASPETIAKYTLTMLKR 293 (304)
Q Consensus 249 ~aL~~~~V~LEG~---------lLKpnMV~pG~~~~~~~~~eeVA~~Tv~~L~r 293 (304)
++|+++|+.+..- .. -.+..|...+ -...+++++...++.|.+
T Consensus 195 ~al~~~gl~vP~dvsvig~~d~~~-~~~~~p~ltt-i~~~~~~~g~~A~~~l~~ 246 (269)
T cd06287 195 RAATELGRAVPDQLRVVTRYDGLR-ARTSEPPLTA-VDLHLDEVAEQAVDLLFA 246 (269)
T ss_pred HHHHHcCCCCCCceEEEeccCchh-hccCCCCccc-ccCCHHHHHHHHHHHHHH
Confidence 8899988754321 11 2344555443 566789999999887753
No 23
>PRK11303 DNA-binding transcriptional regulator FruR; Provisional
Probab=30.81 E-value=4.1e+02 Score=24.15 Aligned_cols=166 Identities=16% Similarity=0.061 Sum_probs=87.7
Q ss_pred CCceeEEeeccccccccccCCcchHHHHHhCCccceeecCCCcccCCCCCCCCccCChhHHHHHHHH-HhhcCCccccce
Q 021993 106 GDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTE-YYKQGARFAKWR 184 (304)
Q Consensus 106 ~~~IsGvILfeETl~q~~~dG~~~~~~L~~kGIvPGIKVDkGl~~l~g~~ge~~t~GLD~L~~R~~~-y~~~Ga~FaKWR 184 (304)
+..+-|+|++...- +..++.+.|.+.| +|-+=+|....+. +.+.. .+..-. -..++++ +.+.|. |
T Consensus 115 ~~~vdgiIi~~~~~-----~~~~~~~~l~~~~-iPvV~v~~~~~~~-~~~~V-~~d~~~-~~~~a~~~L~~~G~-----r 180 (328)
T PRK11303 115 QRQVDALIVSTSLP-----PEHPFYQRLQNDG-LPIIALDRALDRE-HFTSV-VSDDQD-DAEMLAESLLKFPA-----E 180 (328)
T ss_pred HcCCCEEEEcCCCC-----CChHHHHHHHhcC-CCEEEECCCCCCC-CCCEE-EeCCHH-HHHHHHHHHHHCCC-----C
Confidence 45688999864211 1123455666667 5888888754221 11110 122222 2333433 444562 4
Q ss_pred eeeecCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCCCCHHHHHHHHHHHHH-----------------HH
Q 021993 185 TVVSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWS-----------------EV 247 (304)
Q Consensus 185 sVi~i~~~Ps~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~dg~h~ie~c~~Vte~vL~-----------------~v 247 (304)
.+.-+.+.+....- ..-..-|...|+++|+.+ ++...++.+.+...+..++.|. .+
T Consensus 181 ~I~~i~~~~~~~~~---~~R~~Gf~~al~~~g~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d~~A~g~ 253 (328)
T PRK11303 181 SILLLGALPELSVS---FEREQGFRQALKDDPREV----HYLYANSFEREAGAQLFEKWLETHPMPDALFTTSYTLLQGV 253 (328)
T ss_pred eEEEEeCccccccH---HHHHHHHHHHHHHcCCCc----eEEEeCCCChHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHH
Confidence 45545433321111 123344666789999832 3334556666666655555542 57
Q ss_pred HHHHHhCCcccccccc--------cccccCCCCCCCCCCChHHHHHHHHHHhcc
Q 021993 248 FFYLAENNVVLEGILL--------KPSMVTPGAEHKEKASPETIAKYTLTMLKR 293 (304)
Q Consensus 248 f~aL~~~~V~LEG~lL--------KpnMV~pG~~~~~~~~~eeVA~~Tv~~L~r 293 (304)
+++|.++|+.+.+-+- =-+++.|+..+ -...+++++...++.|.+
T Consensus 254 ~~al~~~g~~vP~disv~gfd~~~~~~~~~p~ltt-v~~~~~~~g~~a~~~l~~ 306 (328)
T PRK11303 254 LDVLLERPGELPSDLAIATFGDNELLDFLPCPVNA-VAQQHRLIAERALELALA 306 (328)
T ss_pred HHHHHHcCCCCCCceEEEEeCChHHHhccCCCceE-EecCHHHHHHHHHHHHHH
Confidence 8899998875432220 12334555443 456789999999888753
No 24
>PF10058 DUF2296: Predicted integral membrane metal-binding protein (DUF2296); InterPro: IPR019273 This domain, found mainly in the eukaryotic lunapark proteins, has no known function [].
Probab=28.97 E-value=7 Score=29.04 Aligned_cols=20 Identities=50% Similarity=0.669 Sum_probs=15.7
Q ss_pred HHHHHHHh----CCceeeecceec
Q 021993 207 RYAAISQD----NGLVPIVEPEIL 226 (304)
Q Consensus 207 ryAaicQ~----~GLVPIVEPEVl 226 (304)
|||.||+. ||++|..|+|-+
T Consensus 20 r~aLIC~~C~~hNGla~~~~~~~i 43 (54)
T PF10058_consen 20 RYALICSKCFSHNGLAPKEEFEEI 43 (54)
T ss_pred ceeEECcccchhhcccccccCCce
Confidence 78888876 899997777643
No 25
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=24.59 E-value=1e+02 Score=24.91 Aligned_cols=39 Identities=23% Similarity=0.275 Sum_probs=32.7
Q ss_pred chHHHHHHHHHHhcCCCCceEeecCCCcchHHHhhhcCCCCch
Q 021993 47 AYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTE 89 (304)
Q Consensus 47 ~~~~eL~~tA~~i~a~GKGIlA~DES~gt~~Krl~~iGvente 89 (304)
..++++...|+++...|-.|.| ++.+.+.|+..|++-+.
T Consensus 9 ~~K~~~~~~a~~l~~~G~~i~A----T~gTa~~L~~~Gi~~~~ 47 (112)
T cd00532 9 HVKAMLVDLAPKLSSDGFPLFA----TGGTSRVLADAGIPVRA 47 (112)
T ss_pred ccHHHHHHHHHHHHHCCCEEEE----CcHHHHHHHHcCCceEE
Confidence 4678999999999988777887 57799999999988544
No 26
>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA). This ATPase is involved in transport of arsenite, antimonite or other oxyanions across biological membranes in all three kingdoms of life. ArsA contains a highly conserved AAA motif present in the AAA+ ATPase superfamily associated with a variety of cellular activities. To form a functional ATP-driven pump, ArsA interacts with the permease ArsB, which is a channel-forming integral membrane protein. One of the most interesting features of ArsA is the allosteric activation by its transport substrates. A divalent cation, typically Mg2+, is required for its enzymatic activity.
Probab=22.94 E-value=6e+02 Score=23.40 Aligned_cols=94 Identities=14% Similarity=0.226 Sum_probs=55.0
Q ss_pred cCChhHHH--HHHHHHhhcCCccccceeeeecCCCCCHHHH--HHHHHHHHHHHHHHH---hCCceeeecceecCCCCCC
Q 021993 160 CQGLDGLA--SRSTEYYKQGARFAKWRTVVSIPCGPSALAV--KEAAWGLARYAAISQ---DNGLVPIVEPEILLDGDHP 232 (304)
Q Consensus 160 t~GLD~L~--~R~~~y~~~Ga~FaKWRsVi~i~~~Ps~~aI--~~na~~LAryAaicQ---~~GLVPIVEPEVl~dg~h~ 232 (304)
.+|+|+++ ++..++.+.+ +| .+|-++..|+-..+ ..-...+.+-.++.+ ..+++-++.||-+
T Consensus 104 ~Pg~~e~l~~~~~~~~l~~~----~y-D~VVvDtpPtg~tlrlL~lp~~l~~~~~~l~d~~~~~~vlV~~p~~~------ 172 (254)
T cd00550 104 SPGIEEIAAFDEFSRYIDEA----EY-DVVVFDTAPTGHTLRLLSLPTVLSWAREILSDPERTSFRLVCIPEKM------ 172 (254)
T ss_pred CCCHHHHHHHHHHHHHHhcC----CC-CEEEECCCCcHHHHHHHHhHHHHHHHHHHhcCCcceEEEEEeCCChh------
Confidence 37888875 4555665443 45 34555666754332 222223322111122 2478999999864
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCcccccccccccccCCCCC
Q 021993 233 IERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAE 273 (304)
Q Consensus 233 ie~c~~Vte~vL~~vf~aL~~~~V~LEG~lLKpnMV~pG~~ 273 (304)
+.+-....++.|+.+|+...|.++ |||.|...
T Consensus 173 -------~~~e~~r~~~~L~~~g~~v~gvV~--N~v~~~~~ 204 (254)
T cd00550 173 -------SLYETERAIQELAKYGIDVDAVIV--NQLLPEDV 204 (254)
T ss_pred -------HHHHHHHHHHHHHHCCCCCCEEEE--ecCccccc
Confidence 222244567888899999888886 68888544
No 27
>cd06274 PBP1_FruR Ligand binding domain of DNA transcription repressor specific for fructose (FruR) and its close homologs. Ligand binding domain of DNA transcription repressor specific for fructose (FruR) and its close homologs, all of which are a member of the LacI-GalR family of bacterial transcription regulators. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to members of the type I periplasmic binding protein superfamily. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor
Probab=22.66 E-value=5.1e+02 Score=22.49 Aligned_cols=165 Identities=14% Similarity=0.090 Sum_probs=89.0
Q ss_pred CceeEEeeccccccccccCCcchHHHHHhCCccceeecCCCcccCCCCCCCCccCChhHHH--HHHHHHh-hcCCccccc
Q 021993 107 DYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLA--SRSTEYY-KQGARFAKW 183 (304)
Q Consensus 107 ~~IsGvILfeETl~q~~~dG~~~~~~L~~kGIvPGIKVDkGl~~l~g~~ge~~t~GLD~L~--~R~~~y~-~~Ga~FaKW 183 (304)
..+.|+|++.... +.. ....+.++| +|-+=+|....... -..-+.|+.. ..+++|- +.|.
T Consensus 54 ~~vdgiii~~~~~-----~~~-~~~~~~~~~-ipvV~~~~~~~~~~-----~~~V~~d~~~~g~~~~~~l~~~g~----- 116 (264)
T cd06274 54 RQVDALIVAGSLP-----PDD-PYYLCQKAG-LPVVALDRPGDPSR-----FPSVVSDNRDGAAELTRELLAAPP----- 116 (264)
T ss_pred cCCCEEEEcCCCC-----chH-HHHHHHhcC-CCEEEecCccCCCC-----CCEEEEccHHHHHHHHHHHHHCCC-----
Confidence 5689999876432 111 145567778 48888888753211 1222344432 2333333 3442
Q ss_pred eeeeecCCCCCHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCCCCHHHHHHHHHHHHH------------------
Q 021993 184 RTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWS------------------ 245 (304)
Q Consensus 184 RsVi~i~~~Ps~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~dg~h~ie~c~~Vte~vL~------------------ 245 (304)
|.+.-+.+.+..... .....-|-..|+++|+ | ++++....++.+.+......++.|.
T Consensus 117 ~~i~~i~~~~~~~~~---~~R~~gf~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ai~~~~d~~A~ 191 (264)
T cd06274 117 EEVLFLGGLPELSPS---RERLAGFRQALADAGL-P-VQPDWIYAEGYSPESGYQLMAELLARLGRLPRALFTTSYTLLE 191 (264)
T ss_pred CcEEEEeCCCcccch---HHHHHHHHHHHHHcCC-C-CCcceeecCCCChHHHHHHHHHHHccCCCCCcEEEEcChHHHH
Confidence 344445444432221 2234556667999996 2 2344444555566655554444432
Q ss_pred HHHHHHHhCCcccccccc--------cccccCCCCCCCCCCChHHHHHHHHHHhccC
Q 021993 246 EVFFYLAENNVVLEGILL--------KPSMVTPGAEHKEKASPETIAKYTLTMLKRR 294 (304)
Q Consensus 246 ~vf~aL~~~~V~LEG~lL--------KpnMV~pG~~~~~~~~~eeVA~~Tv~~L~rt 294 (304)
.+.++|+++|+...+-+- --.+..|+.. +-...+++++...++.|.+.
T Consensus 192 g~~~al~~~g~~ip~dv~v~g~d~~~~~~~~~~~lt-ti~~~~~~~g~~a~~~l~~~ 247 (264)
T cd06274 192 GVLRFLRERPGLAPSDLRIATFDDHPLLDFLPFPVH-SVPQDHEALAEAAFELALAA 247 (264)
T ss_pred HHHHHHHHcCCCCCcceEEEEeCCHHHHHhcCCCce-EEeCCHHHHHHHHHHHHHHH
Confidence 456788888875432110 1234445544 35677899999999888664
No 28
>cd00635 PLPDE_III_YBL036c_like Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins. This family contains mostly uncharacterized proteins, widely distributed among eukaryotes, bacteria and archaea, that bear similarity to the yeast hypothetical protein YBL036c, which is homologous to a Pseudomonas aeruginosa gene that is co-transcribed with a known proline biosynthetic gene. YBL036c is a single domain monomeric protein with a typical TIM barrel fold. It binds the PLP cofactor and has been shown to exhibit amino acid racemase activity. The YBL036c structure is similar to the N-terminal domain of the fold type III PLP-dependent enzymes, bacterial alanine racemase and eukaryotic ornithine decarboxylase, which are two-domain dimeric proteins. The lack of a second domain in YBL036c may explain limited D- to L-alanine racemase or non-specific racemase activity.
Probab=22.49 E-value=4.1e+02 Score=23.73 Aligned_cols=86 Identities=14% Similarity=0.094 Sum_probs=50.9
Q ss_pred ccceeecCCCcccCCCCCCCCccCChhHHHHHHHHHhhcCCccccceeeeec-CCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 021993 138 IVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSI-PCGPSALAVKEAAWGLARYAAISQDNG 216 (304)
Q Consensus 138 IvPGIKVDkGl~~l~g~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i-~~~Ps~~aI~~na~~LAryAaicQ~~G 216 (304)
+-..||||+|..+ +.-|..+ +.+..+.+++..+ ..-+.+.+... ++........++...+...+..+++.|
T Consensus 117 ~~v~lkvdtG~~~--~R~G~~~-~~~~~~~~~i~~~-----~~l~~~Gi~sh~s~~~~~~~~~~~~~~~~~~~~~l~~~~ 188 (222)
T cd00635 117 LDVLVQVNIGGEE--SKSGVAP-EELEELLEEIAAL-----PNLRIRGLMTIAPLTEDPEEVRPYFRELRELRDELGAKG 188 (222)
T ss_pred CcEEEEEecCCCC--CCCCCCH-HHHHHHHHHHHcC-----CCCcEEEEEEECCCCCChHHHHHHHHHHHHHHHHHHHhc
Confidence 4458999999532 2224433 2244555554332 22344555554 334455567777888888888788775
Q ss_pred -ceeeecceecCCCCCCHH
Q 021993 217 -LVPIVEPEILLDGDHPIE 234 (304)
Q Consensus 217 -LVPIVEPEVl~dg~h~ie 234 (304)
+-+ ++|.+-|..|.+
T Consensus 189 g~~~---~~is~G~t~~~~ 204 (222)
T cd00635 189 GVNL---KELSMGMSGDFE 204 (222)
T ss_pred CCCC---CEEECcccHhHH
Confidence 522 677888777775
No 29
>PRK02228 V-type ATP synthase subunit F; Provisional
Probab=22.03 E-value=1.7e+02 Score=23.69 Aligned_cols=76 Identities=26% Similarity=0.356 Sum_probs=45.8
Q ss_pred chHHHhhhcC----CCCchhhhhhhhhhhccCCCCCCceeEEeeccccccccccCCcchHHHH---HhCCccceeecCCC
Q 021993 75 TCGKRLASIG----LDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCL---REEKIVPGIKVDKG 147 (304)
Q Consensus 75 t~~Krl~~iG----vente~nrr~yR~ll~ttp~~~~~IsGvILfeETl~q~~~dG~~~~~~L---~~kGIvPGIKVDkG 147 (304)
.++-||..++ +++.++-+..+++++ ..+ =-|+|+-.|.+++.- ++.+ .++...|=|
T Consensus 12 v~GFrLaGi~~~~~~~~~ee~~~~l~~l~-~~~-----d~gII~Ite~~~~~i------~e~i~~~~~~~~~P~i----- 74 (100)
T PRK02228 12 TTGFRLAGIRKVYEVPDDEKLDEAVEEVL-EDD-----DVGILVMHDDDLEKL------PRRLRRTLEESVEPTV----- 74 (100)
T ss_pred HHHHHHcCCceEEeeCCHHHHHHHHHHHh-hCC-----CEEEEEEehhHhHhh------HHHHHHHHhcCCCCEE-----
Confidence 3556666554 233356677777764 222 269999999998653 4444 346666554
Q ss_pred cccCCCCCCCCccCChhHHHHHHH
Q 021993 148 LVPLPGSNNESWCQGLDGLASRST 171 (304)
Q Consensus 148 l~~l~g~~ge~~t~GLD~L~~R~~ 171 (304)
.++||..|. ..++.+.+|+-
T Consensus 75 -i~IP~~~~~---~~i~~~v~raI 94 (100)
T PRK02228 75 -VTLGGGGGS---GGLREKIKRAI 94 (100)
T ss_pred -EEECCCccc---hHHHHHHHHHh
Confidence 556664443 45777777764
No 30
>COG2861 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.43 E-value=3.4e+02 Score=26.38 Aligned_cols=56 Identities=14% Similarity=0.023 Sum_probs=42.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCCCCHHHHHHHHHHHHHHHHHHHHhCCccccc
Q 021993 190 PCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEG 260 (304)
Q Consensus 190 ~~~Ps~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~dg~h~ie~c~~Vte~vL~~vf~aL~~~~V~LEG 260 (304)
+++-+..+|..|-+.+.+|| +++|-+=- | . +....|-+||+.-+..|...||.|-+
T Consensus 184 D~e~~~~~V~kql~~~~~~A---rk~G~ai~------I--G----h~~~~Tv~vl~~~~~~l~~~gIelV~ 239 (250)
T COG2861 184 DDEDTEAAVLKQLDAAEKLA---RKNGSAIG------I--G----HPHKNTVAVLQQWLDELPARGIELVP 239 (250)
T ss_pred cCcCCHHHHHHHHHHHHHHH---HhcCceEE------e--c----CCchhHHHHHHHHHHhCCCCCeEEec
Confidence 56677899999999999996 78887521 1 2 23567888999999999988887744
Done!