BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021995
(304 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q07511|FDH_SOLTU Formate dehydrogenase, mitochondrial OS=Solanum tuberosum GN=FDH1
PE=1 SV=2
Length = 381
Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust.
Identities = 217/243 (89%), Positives = 231/243 (95%)
Query: 62 GLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVG 121
GLTVAEVTGSN VSVAEDELMRILILVRNFLPGHHQVI+GEWNVA +A+RAYDLEGKTVG
Sbjct: 139 GLTVAEVTGSNTVSVAEDELMRILILVRNFLPGHHQVINGEWNVAAIAHRAYDLEGKTVG 198
Query: 122 TVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNT 181
TVG GRIG+LLLQRLKPFNCNLLYHDR+KMD +LE + GAKFEEDLD ML KCDIVV+NT
Sbjct: 199 TVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDSELENQIGAKFEEDLDKMLSKCDIVVINT 258
Query: 182 PLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 241
PLTEKT+GMFDK+RIAK+KKGVLIVNNARGAIMDTQAVVDAC+SGHIAGYSGDVW PQPA
Sbjct: 259 PLTEKTKGMFDKERIAKLKKGVLIVNNARGAIMDTQAVVDACNSGHIAGYSGDVWYPQPA 318
Query: 242 PKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAP 301
PKDHPWRYMPNQAMTPH+SGTTIDAQLRYAAG KDMLDRYFKGEDFP +NYIVK GELAP
Sbjct: 319 PKDHPWRYMPNQAMTPHISGTTIDAQLRYAAGTKDMLDRYFKGEDFPAENYIVKDGELAP 378
Query: 302 QYR 304
QYR
Sbjct: 379 QYR 381
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Query: 1 MAMKRVASSAINAFASSGFLRSSSRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNFLAAA 59
MAM RVAS+A A S SS F+R AS G KKIVGVFYK NEYA MNPNFL A
Sbjct: 1 MAMSRVASTAARAITSP----SSLVFTRELQASPGPKKIVGVFYKANEYAEMNPNFLGCA 56
Query: 60 AAGLTVAE 67
L + E
Sbjct: 57 ENALGIRE 64
>sp|Q9SXP2|FDH1_ORYSJ Formate dehydrogenase 1, mitochondrial OS=Oryza sativa subsp.
japonica GN=Os06g0486800 PE=1 SV=2
Length = 376
Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust.
Identities = 211/243 (86%), Positives = 230/243 (94%)
Query: 62 GLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVG 121
GLTVAEVTGSN VSVAEDELMRILIL+RNFLPG+ QV+ GEWNVAG+AYRAYDLEGKTVG
Sbjct: 134 GLTVAEVTGSNTVSVAEDELMRILILLRNFLPGYQQVVHGEWNVAGIAYRAYDLEGKTVG 193
Query: 122 TVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNT 181
TVG GRIG+LLLQRLKPFNCNLLYHDR+K+DP+LEKE GAK+EEDLD MLPKCD++V+NT
Sbjct: 194 TVGAGRIGRLLLQRLKPFNCNLLYHDRLKIDPELEKEIGAKYEEDLDAMLPKCDVIVINT 253
Query: 182 PLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 241
PLTEKTRGMF+K+RIAKMKKGV+IVNNARGAIMDTQAV DACSSG +AGY GDVW PQPA
Sbjct: 254 PLTEKTRGMFNKERIAKMKKGVIIVNNARGAIMDTQAVADACSSGQVAGYGGDVWFPQPA 313
Query: 242 PKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAP 301
PKDHPWRYMPN AMTPH+SGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVK G+LA
Sbjct: 314 PKDHPWRYMPNHAMTPHISGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKEGQLAS 373
Query: 302 QYR 304
QY+
Sbjct: 374 QYQ 376
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 15 ASSGFLRSSSRFSRH-YASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAE 67
A++G L + SR + S+GSKKIVGVFYKG EYA NPNF+ L + E
Sbjct: 6 AAAGHLLGRALGSRAAHTSAGSKKIVGVFYKGGEYADKNPNFVGCVEGALGIRE 59
>sp|Q67U69|FDH2_ORYSJ Formate dehydrogenase 2, mitochondrial OS=Oryza sativa subsp.
japonica GN=Os06g0486900 PE=2 SV=1
Length = 378
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 206/243 (84%), Positives = 228/243 (93%)
Query: 62 GLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVG 121
GLTVAE+TGSN VSVAED+LMRIL+L+RNFLPGHHQ+++GEWNVAG+A+R YDLEGKTVG
Sbjct: 136 GLTVAEITGSNTVSVAEDQLMRILLLLRNFLPGHHQIVNGEWNVAGIAHRTYDLEGKTVG 195
Query: 122 TVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNT 181
TVG GRIG+LLLQRLKPFNCNL+YHDRVK+DP+LEKE GAK+EEDLD MLPKCD+VV+N
Sbjct: 196 TVGAGRIGRLLLQRLKPFNCNLMYHDRVKIDPELEKEIGAKYEEDLDAMLPKCDVVVINM 255
Query: 182 PLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 241
PLTEKTRGMF+K+RIAKMKKGV IVNNARGAIMDTQAV DAC+SGH+AGY GDVW PQPA
Sbjct: 256 PLTEKTRGMFNKERIAKMKKGVTIVNNARGAIMDTQAVADACASGHVAGYGGDVWFPQPA 315
Query: 242 PKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAP 301
PKDHPWRYMPN AMTPH SGTTID QLRYAAGVKDMLDRYFKGEDFP QNYIVKAG+LA
Sbjct: 316 PKDHPWRYMPNHAMTPHCSGTTIDGQLRYAAGVKDMLDRYFKGEDFPAQNYIVKAGQLAS 375
Query: 302 QYR 304
QY+
Sbjct: 376 QYQ 378
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 1 MAMKRVASSAINAFASSGFLRSSSRFSRHYASSGSKKIVGVFYKGNEYASMNPNFLAAAA 60
MAM R S+A + L S++ + S+GSKK+VGVFYKG EYA NPNF+
Sbjct: 1 MAMWRAPSAAGQLLGRA--LASTAAQT----SAGSKKVVGVFYKGGEYADKNPNFVGCVD 54
Query: 61 AGLTV 65
+ L +
Sbjct: 55 SALGI 59
>sp|Q9ZRI8|FDH_HORVU Formate dehydrogenase, mitochondrial OS=Hordeum vulgare PE=2 SV=1
Length = 377
Score = 457 bits (1175), Expect = e-128, Method: Compositional matrix adjust.
Identities = 208/243 (85%), Positives = 229/243 (94%)
Query: 62 GLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVG 121
GLTVA VTGSN VSVAEDELMRILIL+RNFLPG+ QV+ GEWNVAG+A+RAYDLEGKTVG
Sbjct: 135 GLTVARVTGSNTVSVAEDELMRILILLRNFLPGYQQVVKGEWNVAGIAHRAYDLEGKTVG 194
Query: 122 TVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNT 181
TVG GR G+LLLQRLKPFNCNLLYHDR++++P+LEKE GAKFEEDLD MLPKCD+VV+NT
Sbjct: 195 TVGAGRYGRLLLQRLKPFNCNLLYHDRLQINPELEKEIGAKFEEDLDAMLPKCDVVVINT 254
Query: 182 PLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 241
PLTEKTRGMF+K++IAKMKKGV+IVNNARGAIMDTQAV DACSSGHIAGY GDVW PQPA
Sbjct: 255 PLTEKTRGMFNKEKIAKMKKGVIIVNNARGAIMDTQAVADACSSGHIAGYGGDVWFPQPA 314
Query: 242 PKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAP 301
PKDHPWRYMPN AMTPH+SGTTIDAQLRYAAGVKDMLDRYFKGE+FPV+NYIVK GELA
Sbjct: 315 PKDHPWRYMPNHAMTPHISGTTIDAQLRYAAGVKDMLDRYFKGEEFPVENYIVKEGELAS 374
Query: 302 QYR 304
QY+
Sbjct: 375 QYK 377
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 30 YASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTV 65
+ S+GSKKIVGVFY+ EYA NPNF+ L +
Sbjct: 23 HTSAGSKKIVGVFYQAGEYADKNPNFVGCVEGALGI 58
>sp|Q9S7E4|FDH_ARATH Formate dehydrogenase, mitochondrial OS=Arabidopsis thaliana
GN=FDH1 PE=1 SV=1
Length = 384
Score = 447 bits (1151), Expect = e-125, Method: Compositional matrix adjust.
Identities = 205/243 (84%), Positives = 226/243 (93%)
Query: 62 GLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVG 121
GLTVAEVTGSNVVSVAEDELMRILIL+RNF+PG++QV+ GEWNVAG+AYRAYDLEGKT+G
Sbjct: 142 GLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIG 201
Query: 122 TVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNT 181
TVG GRIGKLLLQRLKPF CNLLYHDR++M P+LEKETGAKF EDL+ MLPKCD++V+N
Sbjct: 202 TVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINM 261
Query: 182 PLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA 241
PLTEKTRGMF+K+ I K+KKGVLIVNNARGAIM+ QAVVDA SGHI GYSGDVW+PQPA
Sbjct: 262 PLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPA 321
Query: 242 PKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAP 301
PKDHPWRYMPNQAMTPH SGTTIDAQLRYAAG KDML+RYFKGEDFP +NYIVK GELAP
Sbjct: 322 PKDHPWRYMPNQAMTPHTSGTTIDAQLRYAAGTKDMLERYFKGEDFPTENYIVKDGELAP 381
Query: 302 QYR 304
QYR
Sbjct: 382 QYR 384
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 39/65 (60%)
Query: 1 MAMKRVASSAINAFASSGFLRSSSRFSRHYASSGSKKIVGVFYKGNEYASMNPNFLAAAA 60
MAM++ A + I A +SS +R + +S SKKIVGVFYK NEYA+ NPNFL
Sbjct: 1 MAMRQAAKATIRACSSSSSSGYFARRQFNASSGDSKKIVGVFYKANEYATKNPNFLGCVE 60
Query: 61 AGLTV 65
L +
Sbjct: 61 NALGI 65
>sp|Q03134|FDH_EMENI Probable formate dehydrogenase OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=aciA
PE=2 SV=3
Length = 365
Score = 280 bits (715), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 138/249 (55%), Positives = 180/249 (72%), Gaps = 7/249 (2%)
Query: 61 AGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTV 120
G+TVAEVTGSNVVSVAE +M IL+LVRNF+P H Q+ +G+WNVA VA +DLE K V
Sbjct: 109 GGITVAEVTGSNVVSVAEHVVMTILLLVRNFVPAHDQIRNGDWNVAAVAKNEFDLENKVV 168
Query: 121 GTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVV 179
GTVG GRIG+ +L+RLKPF+C LLY+D + P++EKE GA+ + L+ M+ +CD+V +
Sbjct: 169 GTVGVGRIGERVLRRLKPFDCKELLYYDYQPLRPEVEKEIGARRVDSLEEMVSQCDVVTI 228
Query: 180 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQ 239
N PL EKTRG+F+K+ I+KMK G +VN ARGAI+ + V +A SGH+ GY GDVW PQ
Sbjct: 229 NCPLHEKTRGLFNKELISKMKPGSWLVNTARGAIVVKEDVAEALKSGHLRGYGGDVWFPQ 288
Query: 240 PAPKDHPWRYMPN-----QAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE-DFPVQNYI 293
PAPK+HP RY + A PH+SGT+IDAQ+RYA G K +LD YF G D+ Q+ I
Sbjct: 289 PAPKEHPLRYAEHPWGGGNATVPHMSGTSIDAQIRYANGTKAILDSYFSGRFDYQPQDLI 348
Query: 294 VKAGELAPQ 302
V G+ A +
Sbjct: 349 VHGGDYATK 357
>sp|Q07103|FDH_NEUCR Formate dehydrogenase OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fdh
PE=2 SV=1
Length = 375
Score = 253 bits (645), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/249 (54%), Positives = 176/249 (70%), Gaps = 7/249 (2%)
Query: 61 AGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTV 120
G+TVAEVTGSNVVSVAE LM IL+LVRNF+P H Q+ G W+VA A +DLEGK V
Sbjct: 109 GGITVAEVTGSNVVSVAEHVLMTILVLVRNFVPAHEQIQEGRWDVAEAAKNEFDLEGKVV 168
Query: 121 GTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVV 179
GTVG GRIG+ +L+RLKPF+C LLY+D + + E E G + DL+ ML +CD+V +
Sbjct: 169 GTVGVGRIGERVLRRLKPFDCKELLYYDYQPLSAEKEAEIGCRRVADLEEMLAQCDVVTI 228
Query: 180 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQ 239
N PL EKT+G+F+K+ I+KMKKG +VN ARGAI+ + V +A SGH+ GY GDVW PQ
Sbjct: 229 NCPLHEKTQGLFNKELISKMKKGSWLVNTARGAIVVKEDVAEALKSGHLRGYGGDVWFPQ 288
Query: 240 PAPKDHPWRYMPN-----QAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE-DFPVQNYI 293
PAP+DHP RY N AM PH+SGT++DAQ RYAAG K +++ Y G+ D+ ++ I
Sbjct: 289 PAPQDHPLRYAKNPFGGGNAMVPHMSGTSLDAQKRYAAGTKAIIESYLSGKHDYRPEDLI 348
Query: 294 VKAGELAPQ 302
V G+ A +
Sbjct: 349 VYGGDYATK 357
>sp|O13437|FDH_CANBO Formate dehydrogenase OS=Candida boidinii GN=FDH1 PE=1 SV=1
Length = 364
Score = 251 bits (642), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 128/269 (47%), Positives = 182/269 (67%), Gaps = 9/269 (3%)
Query: 37 KIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHH 96
K+V V G+++ ++ ++ ++V EVTGSNVVSVAE +M +L+LVRNF+P H
Sbjct: 86 KLVVVAGVGSDHIDLD--YINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHE 143
Query: 97 QVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQL 155
Q+I+ +W VA +A AYD+EGKT+ T+G GRIG +L+RL PFN LLY+D + +
Sbjct: 144 QIINHDWEVAAIAKDAYDIEGKTIATIGAGRIGYRVLERLLPFNPKELLYYDYQALPKEA 203
Query: 156 EKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMD 215
E++ GA+ E+++ ++ + DIV VN PL T+G+ +K+ ++K KKG +VN ARGAI
Sbjct: 204 EEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICV 263
Query: 216 TQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQ-----AMTPHVSGTTIDAQLRY 270
+ V A SG + GY GDVW PQPAPKDHPWR M N+ AMTPH SGTT+DAQ RY
Sbjct: 264 AEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYSGTTLDAQTRY 323
Query: 271 AAGVKDMLDRYFKGE-DFPVQNYIVKAGE 298
A G K++L+ +F G+ D+ Q+ I+ GE
Sbjct: 324 AEGTKNILESFFTGKFDYRPQDIILLNGE 352
>sp|P33160|FDH_PSESR Formate dehydrogenase OS=Pseudomonas sp. (strain 101) PE=1 SV=3
Length = 401
Score = 239 bits (609), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/238 (49%), Positives = 151/238 (63%)
Query: 63 LTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGT 122
+TVAEVT N +SVAE +M IL LVRN+LP H G WN+A AYDLE VGT
Sbjct: 138 VTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGT 197
Query: 123 VGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTP 182
V GRIG +L+RL PF+ +L Y DR ++ +EKE + + M P CD+V +N P
Sbjct: 198 VAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCP 257
Query: 183 LTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAP 242
L +T M + + + K+G IVN ARG + D AV A SG +AGY+GDVW PQPAP
Sbjct: 258 LHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAP 317
Query: 243 KDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELA 300
KDHPWR MP MTPH+SGTT+ AQ RYAAG +++L+ +F+G + IV+ G LA
Sbjct: 318 KDHPWRTMPYNGMTPHISGTTLTAQARYAAGTREILECFFEGRPIRDEYLIVQGGALA 375
>sp|P33677|FDH_PICAN Formate dehydrogenase OS=Pichia angusta GN=FMDH PE=3 SV=2
Length = 362
Score = 236 bits (603), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/255 (45%), Positives = 169/255 (66%), Gaps = 7/255 (2%)
Query: 51 MNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAY 110
++ +++ + ++V EVTGSNVVSVAE +M +L+LVRNF+P H Q+ISG WNVA +A
Sbjct: 98 IDLDYINQSGRDISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIISGGWNVAEIAK 157
Query: 111 RAYDLEGKTVGTVGCGRIGKLLLQRLKPFN-CNLLYHDRVKMDPQLEKETGAKFEEDLDT 169
++D+EGK + T+G GRIG +L+RL FN LLY+D + + E++ GA+ D+
Sbjct: 158 DSFDIEGKVIATIGAGRIGYRVLERLVAFNPKELLYYDYQSLSKEAEEKVGARRVHDIKE 217
Query: 170 MLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229
++ + DIV +N PL ++G+ + + + KKG +VN ARGAI + V A SG +
Sbjct: 218 LVAQADIVTINCPLHAGSKGLVNAELLKHFKKGAWLVNTARGAICVAEDVAAAVKSGQLR 277
Query: 230 GYSGDVWNPQPAPKDHPWRYMPNQ-----AMTPHVSGTTIDAQLRYAAGVKDMLDRYFKG 284
GY GDVW PQPAPKDHPWR M N+ AMTPH SG+ IDAQ+RYA G K++L+ +F
Sbjct: 278 GYGGDVWFPQPAPKDHPWRSMANKYGAGNAMTPHYSGSVIDAQVRYAQGTKNILESFFTQ 337
Query: 285 E-DFPVQNYIVKAGE 298
+ D+ Q+ I+ G+
Sbjct: 338 KFDYRPQDIILLNGK 352
>sp|C8ZHD6|FDH2_YEAS8 Formate dehydrogenase 2 OS=Saccharomyces cerevisiae (strain Lalvin
EC1118 / Prise de mousse) GN=FDH2 PE=2 SV=1
Length = 376
Score = 233 bits (594), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/265 (48%), Positives = 169/265 (63%), Gaps = 19/265 (7%)
Query: 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLE 116
AA +TV EVTGSNVVSVAE + IL+L+RN+ GH Q I+GEW++AGVA YDLE
Sbjct: 106 AANERKITVTEVTGSNVVSVAEHVMATILVLIRNYNGGHQQAINGEWDIAGVAKNEYDLE 165
Query: 117 GKTVGTVGCGRIGKLLLQRLKPFN-CNLLYHD----------RVKMDPQLEKETGAKFE- 164
K + TVG GRIG +L+RL FN LLY+D R+ +L G +
Sbjct: 166 DKIISTVGAGRIGYRVLERLVAFNPKKLLYYDYQELPAEAINRLNEASKLFNGRGDIVQR 225
Query: 165 -EDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDAC 223
E L+ M+ + D+V +N PL + +RG+F+K I+ MK G +VN ARGAI + V +A
Sbjct: 226 VEKLEDMVAQSDVVTINCPLHKDSRGLFNKKLISHMKDGAYLVNTARGAICVAEDVAEAV 285
Query: 224 SSGHIAGYSGDVWNPQPAPKDHPWRYMPNQ-----AMTPHVSGTTIDAQLRYAAGVKDML 278
SG +AGY GDVW+ QPAPKDHPWR M N+ AMT H+SGT++DAQ RYA GVK++L
Sbjct: 286 KSGKLAGYGGDVWDKQPAPKDHPWRTMDNKDHVGNAMTVHISGTSLDAQKRYAQGVKNIL 345
Query: 279 DRYF-KGEDFPVQNYIVKAGELAPQ 302
+ YF K D+ Q+ IV+ G A +
Sbjct: 346 NSYFSKKFDYRPQDIIVQNGSYATR 370
>sp|A6ZN46|FDH2_YEAS7 Formate dehydrogenase 2 OS=Saccharomyces cerevisiae (strain YJM789)
GN=FDH1 PE=2 SV=1
Length = 376
Score = 233 bits (594), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/265 (48%), Positives = 169/265 (63%), Gaps = 19/265 (7%)
Query: 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLE 116
AA +TV EVTGSNVVSVAE + IL+L+RN+ GH Q I+GEW++AGVA YDLE
Sbjct: 106 AANERKITVTEVTGSNVVSVAEHVMATILVLIRNYNGGHQQAINGEWDIAGVAKNEYDLE 165
Query: 117 GKTVGTVGCGRIGKLLLQRLKPFN-CNLLYHD----------RVKMDPQLEKETGAKFE- 164
K + TVG GRIG +L+RL FN LLY+D R+ +L G +
Sbjct: 166 DKIISTVGAGRIGYRVLERLVAFNPKKLLYYDYQELPAEAINRLNEASKLFNGRGDIVQR 225
Query: 165 -EDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDAC 223
E L+ M+ + D+V +N PL + +RG+F+K I+ MK G +VN ARGAI + V +A
Sbjct: 226 VEKLEDMVAQSDVVTINCPLHKDSRGLFNKKLISHMKDGAYLVNTARGAICVAEDVAEAV 285
Query: 224 SSGHIAGYSGDVWNPQPAPKDHPWRYMPNQ-----AMTPHVSGTTIDAQLRYAAGVKDML 278
SG +AGY GDVW+ QPAPKDHPWR M N+ AMT H+SGT++DAQ RYA GVK++L
Sbjct: 286 KSGKLAGYGGDVWDKQPAPKDHPWRTMDNKDHVGNAMTVHISGTSLDAQKRYAQGVKNIL 345
Query: 279 DRYF-KGEDFPVQNYIVKAGELAPQ 302
+ YF K D+ Q+ IV+ G A +
Sbjct: 346 NSYFSKKFDYRPQDIIVQNGSYATR 370
>sp|Q08911|FDH1_YEAST Formate dehydrogenase 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=FDH1 PE=2 SV=1
Length = 376
Score = 233 bits (594), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/265 (48%), Positives = 169/265 (63%), Gaps = 19/265 (7%)
Query: 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLE 116
AA +TV EVTGSNVVSVAE + IL+L+RN+ GH Q I+GEW++AGVA YDLE
Sbjct: 106 AANERKITVTEVTGSNVVSVAEHVMATILVLIRNYNGGHQQAINGEWDIAGVAKNEYDLE 165
Query: 117 GKTVGTVGCGRIGKLLLQRLKPFN-CNLLYHD----------RVKMDPQLEKETGAKFE- 164
K + TVG GRIG +L+RL FN LLY+D R+ +L G +
Sbjct: 166 DKIISTVGAGRIGYRVLERLVAFNPKKLLYYDYQELPAEAINRLNEASKLFNGRGDIVQR 225
Query: 165 -EDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDAC 223
E L+ M+ + D+V +N PL + +RG+F+K I+ MK G +VN ARGAI + V +A
Sbjct: 226 VEKLEDMVAQSDVVTINCPLHKDSRGLFNKKLISHMKDGAYLVNTARGAICVAEDVAEAV 285
Query: 224 SSGHIAGYSGDVWNPQPAPKDHPWRYMPNQ-----AMTPHVSGTTIDAQLRYAAGVKDML 278
SG +AGY GDVW+ QPAPKDHPWR M N+ AMT H+SGT++DAQ RYA GVK++L
Sbjct: 286 KSGKLAGYGGDVWDKQPAPKDHPWRTMDNKDHVGNAMTVHISGTSLDAQKRYAQGVKNIL 345
Query: 279 DRYF-KGEDFPVQNYIVKAGELAPQ 302
+ YF K D+ Q+ IV+ G A +
Sbjct: 346 NSYFSKKFDYRPQDIIVQNGSYATR 370
>sp|P0CF35|FDH2_YEAST Putative formate dehydrogenase 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=FDH2 PE=5 SV=1
Length = 236
Score = 169 bits (427), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 128/209 (61%), Gaps = 19/209 (9%)
Query: 113 YDLEGKTVGTVGCGRIGKLLLQRLKPFN-CNLLYHD----------RVKMDPQLEKETGA 161
YDLE K + TVG GRIG +L+RL FN LLY+D R+ +L G
Sbjct: 22 YDLEDKIISTVGAGRIGYRVLERLVAFNPKKLLYYDYQELPAEAINRLNEASKLFNGRGD 81
Query: 162 KFE--EDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAV 219
+ E L+ M+ + D+V +N PL + +RG+F+K I+ MK G +VN ARGAI + V
Sbjct: 82 IVQRVEKLEDMVAQSDVVTINCPLHKDSRGLFNKKLISHMKDGAYLVNTARGAICVAEDV 141
Query: 220 VDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQ-----AMTPHVSGTTIDAQLRYAAGV 274
+A SG +AGY GDVW+ QPAPKDHPWR M N+ AMT H+SGT++ AQ RYA GV
Sbjct: 142 AEAVKSGKLAGYGGDVWDKQPAPKDHPWRTMDNKDHVGNAMTVHISGTSLHAQKRYAQGV 201
Query: 275 KDMLDRYF-KGEDFPVQNYIVKAGELAPQ 302
K++L+ YF K D+ Q+ IV+ G A +
Sbjct: 202 KNILNSYFSKKFDYRPQDIIVQNGSYATR 230
>sp|P35136|SERA_BACSU D-3-phosphoglycerate dehydrogenase OS=Bacillus subtilis (strain
168) GN=serA PE=3 SV=3
Length = 525
Score = 137 bits (346), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 145/279 (51%), Gaps = 18/279 (6%)
Query: 19 FLRSSSRFSRH-YASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVA 77
+RS+++ + + S KIVG G + N + A G+ V N +S A
Sbjct: 45 LVRSATKVTEDLFNKMTSLKIVGRAGVGVD----NIDIDEATKHGVIVINAPNGNTISTA 100
Query: 78 EDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK 137
E I L+R+ + V S EWN AY +L GKT+G VG GRIG + QR +
Sbjct: 101 EHTFAMISSLMRHIPQANISVKSREWN--RTAYVGSELYGKTLGIVGLGRIGSEIAQRAR 158
Query: 138 PFNCNLLYHDRVKMDPQLEKETGAKF---EEDLDTMLPKCDIVVVNTPLTEKTRGMFDKD 194
F + DP L +E K + +L DI+ V+TPLT++T+G+ +K+
Sbjct: 159 AFGMTVHV-----FDPFLTEERAKKIGVNSRTFEEVLESADIITVHTPLTKETKGLLNKE 213
Query: 195 RIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQA 254
IAK KKGV ++N ARG I+D A+++A +GH+AG + DV+ +P P D+ P
Sbjct: 214 TIAKTKKGVRLINCARGGIIDEAALLEALENGHVAGAALDVFEVEP-PVDNKLVDHPLVI 272
Query: 255 MTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYI 293
TPH+ +T +AQL AA V + + ++ KG PV + I
Sbjct: 273 ATPHLGASTKEAQLNVAAQVSEEVLQFAKG--LPVMSAI 309
>sp|A1RYE4|GYAR_THEPD Glyoxylate reductase OS=Thermofilum pendens (strain Hrk 5) GN=gyaR
PE=3 SV=1
Length = 339
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 128/235 (54%), Gaps = 7/235 (2%)
Query: 58 AAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAY--RAYDL 115
A G+ V G +VAE + IL + R + + +G+W+ Y +L
Sbjct: 88 ATKRGIYVTHTPGVLTDAVAEFTVGLILAVTRRIVEADKIIRTGQWDKPWNPYFLTGPEL 147
Query: 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEE--DLDTMLPK 173
+GKT+G VG GRIG +RL F+ +LY+D ++ + + ET E DLDT+L K
Sbjct: 148 KGKTIGLVGLGRIGVATAKRLSSFDVKILYYD---IERRWDVETVIPNMEFTDLDTLLEK 204
Query: 174 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSG 233
DIV ++ PLT++T + +++R+ KMKK ++N ARG ++DT+A+V A G IAG +
Sbjct: 205 SDIVSIHVPLTKETYHLINEERLRKMKKTAYLINTARGPVVDTEALVKALKEGWIAGAAL 264
Query: 234 DVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFP 288
DV+ +P P +HP N + PH++ TI+A+ R A L KGE P
Sbjct: 265 DVFEQEPLPPNHPLTKFDNVVLAPHIASATIEARQRMAELAARNLIAVLKGEMPP 319
>sp|Q58424|SERA_METJA D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=serA PE=3 SV=1
Length = 524
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 141/272 (51%), Gaps = 17/272 (6%)
Query: 19 FLRSSSRFSRHYASSGSK-KIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVA 77
+RS ++ +R K K++G G + N + AA G+ V ++ +SVA
Sbjct: 46 VVRSGTKVTRDVIEKAEKLKVIGRAGVGVD----NIDVEAATEKGIIVVNAPDASSISVA 101
Query: 78 EDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK 137
E + +L RN + GEW+ ++ +L GKT+G +G GRIG+ +++R K
Sbjct: 102 ELTMGLMLAAARNIPQATASLKRGEWDRK--RFKGIELYGKTLGVIGLGRIGQQVVKRAK 159
Query: 138 PFNCNLLYHDRVKMDPQLEKET----GAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 193
F N++ +D P + KE G + +D++ + + D + ++ PLT KTR + +
Sbjct: 160 AFGMNIIGYD-----PYIPKEVAESMGVELVDDINELCKRADFITLHVPLTPKTRHIIGR 214
Query: 194 DRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQ 253
++IA MKK +IVN ARG ++D +A+ +A G I + DV+ +P PKD+P + N
Sbjct: 215 EQIALMKKNAIIVNCARGGLIDEKALYEALKEGKIRAAALDVFEEEP-PKDNPLLTLDNV 273
Query: 254 AMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 285
TPH +T +AQ V + + + +GE
Sbjct: 274 IGTPHQGASTEEAQKAAGTIVAEQIKKVLRGE 305
>sp|O29445|SERA_ARCFU D-3-phosphoglycerate dehydrogenase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=serA PE=3 SV=1
Length = 527
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 123/242 (50%), Gaps = 6/242 (2%)
Query: 52 NPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYR 111
N + AA G+ V G N +S AE + +L R V G+W +
Sbjct: 76 NIDINAATQRGIVVVNAPGGNTISTAEHAIALMLAAARKIPQADRSVKEGKWERK--KFM 133
Query: 112 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTML 171
+L GKT G +G GR+G + +R K N+L +D + + ++ G K D DT+L
Sbjct: 134 GIELRGKTAGVIGLGRVGFEVAKRCKALEMNVLAYDPF-VSKERAEQIGVKLV-DFDTLL 191
Query: 172 PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGY 231
D++ V+ P T++T G+ K + KMK GV++VN ARG I+D A+ +A +G +A
Sbjct: 192 ASSDVITVHVPRTKETIGLIGKGQFEKMKDGVIVVNAARGGIVDEAALYEAIKAGKVAAA 251
Query: 232 SGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQN 291
+ DV+ +P D+P + N TPH++ +T +AQL + + + KG PV+N
Sbjct: 252 ALDVYEKEPPSPDNPLLKLDNVVTTPHIAASTREAQLNVGMIIAEDIVNMAKG--LPVRN 309
Query: 292 YI 293
+
Sbjct: 310 AV 311
>sp|Q8U3Y2|GYAR_PYRFU Glyoxylate reductase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=gyaR PE=3 SV=1
Length = 336
Score = 127 bits (320), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 119/210 (56%), Gaps = 8/210 (3%)
Query: 84 ILILVRNFLPGHHQVISGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKP 138
+L R+ + G V SGEW G+A+ Y+L GKT+G VG GRIG+ + +R K
Sbjct: 112 LLATARHVVKGDKFVRSGEWKRKGIAWHPKWFLGYELYGKTIGIVGFGRIGQAIARRAKG 171
Query: 139 FNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAK 198
FN +LY+ R + Q EKE GA++ L+ +L + D V++ PLT++T M +++R+
Sbjct: 172 FNMRILYYSRTR-KSQAEKELGAEYR-PLEEVLKESDFVILAVPLTKETMYMINEERLKL 229
Query: 199 MKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPH 258
MK ++VN ARG ++DT+A++ A G IAG DV+ +P + + + N +TPH
Sbjct: 230 MKPTAILVNIARGKVVDTKALIKALKEGWIAGAGLDVFEEEPYYNEELFS-LDNVVLTPH 288
Query: 259 VSGTTIDAQLRYAAGVKDMLDRYFKGEDFP 288
+ T +A+ A V L + +GE P
Sbjct: 289 IGSATFEAREAMAELVARNLIAFKRGEIPP 318
>sp|P53839|GOR1_YEAST Glyoxylate reductase 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GOR1 PE=1 SV=1
Length = 350
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 122/225 (54%), Gaps = 9/225 (4%)
Query: 20 LRSSSRFSRHYASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAED 79
++++ RF A + +V V + G Y ++ + VA V + A+
Sbjct: 65 VKNTGRFDEELALALPSSVVAVCHTGAGYDQIDVEPFKKRH--IQVANVPDLVSNATADT 122
Query: 80 ELMRILILVRNFLPGHHQVISGEWNVAGVAYRA---YDLEGKTVGTVGCGRIGKLLLQRL 136
+ +L +RNF G+ ++I G W AG A + YD EGKTVG +G GRIG+ +L+RL
Sbjct: 123 HVFLLLGALRNFGIGNRRLIEGNWPEAGPACGSPFGYDPEGKTVGILGLGRIGRCILERL 182
Query: 137 KPFNC-NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 195
KPF N +YH+R ++ E+E G ++ + L + DIV VN PL T + + +
Sbjct: 183 KPFGFENFIYHNRHQLPS--EEEHGCEYV-GFEEFLKRSDIVSVNVPLNHNTHHLINAET 239
Query: 196 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP 240
I KMK GV+IVN ARGA++D QA+ DA SG I DV+ +P
Sbjct: 240 IEKMKDGVVIVNTARGAVIDEQAMTDALRSGKIRSAGLDVFEYEP 284
>sp|O27051|SERA_METTH D-3-phosphoglycerate dehydrogenase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=serA PE=3 SV=1
Length = 525
Score = 124 bits (312), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 132/270 (48%), Gaps = 16/270 (5%)
Query: 19 FLRSSSRFSRHYASSGSK-KIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVA 77
+RS ++ +R + + KI+ G + N + AA G+ V S ++VA
Sbjct: 48 VVRSRTKVTREVIEAAPRLKIIARAGVGVD----NVDVKAATDRGIMVINAPESTSITVA 103
Query: 78 EDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK 137
E + +L L R V G+W + +L GKT+G +G GRIG ++ R K
Sbjct: 104 EHSIGLMLALARKIAIADRSVKEGKWEKN--RFMGIELNGKTLGIIGMGRIGSQVVVRTK 161
Query: 138 PFNCNLLYHDRVKMDPQLEKETGAKF---EEDLDTMLPKCDIVVVNTPLTEKTRGMFDKD 194
F +++ +D P + KE + DL+T+L + DIV ++ PLT +TR + +D
Sbjct: 162 AFGMDIMVYD-----PYISKEAAEEMGVTVTDLETLLRESDIVTIHVPLTPETRHLISED 216
Query: 195 RIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQA 254
MK IVN ARG I+D A+ A G IAG + DV+ +P P+ P + N
Sbjct: 217 EFKLMKDTAFIVNCARGGIIDEDALYRALKDGEIAGAALDVFEEEP-PEGSPLLELENVV 275
Query: 255 MTPHVSGTTIDAQLRYAAGVKDMLDRYFKG 284
+TPH+ +T +AQ A V + + F+G
Sbjct: 276 LTPHIGASTSEAQRDAAIIVANEIKTVFQG 305
>sp|B6YWH0|GYAR_THEON Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1)
GN=gyaR PE=3 SV=1
Length = 334
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 130/248 (52%), Gaps = 10/248 (4%)
Query: 48 YASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILV--RNFLPGHHQVISGEWNV 105
YA N A + V +V++ A ++ +L+L R + V SGEW
Sbjct: 74 YAVGYDNIDIEEATKMGVYITNTPDVLTNATADMAWVLLLATARRLIEADKFVRSGEWKK 133
Query: 106 AGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG 160
GVA+ YD+ G+T+G VG GRIG+ + +R K F +LY+ R + P++EKE G
Sbjct: 134 RGVAWHPLMFLGYDVYGRTIGIVGFGRIGQAIARRAKGFGMRILYNSRTR-KPEVEKELG 192
Query: 161 AKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVV 220
A+F LD +L + D VV+ PLT++T M +++R+ MK ++VN ARG ++DT+A+V
Sbjct: 193 AEFM-PLDELLKESDFVVLVVPLTKETYHMINEERLKLMKPTAILVNIARGKVVDTEALV 251
Query: 221 DACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDR 280
A G IAG DV+ +P + + + N + PH+ T A+ A V L
Sbjct: 252 KALREGWIAGAGLDVFEEEPYYHEELFS-LDNVVLAPHIGSATYGAREGMAELVARNLIA 310
Query: 281 YFKGEDFP 288
+ GE P
Sbjct: 311 FKNGEVPP 318
>sp|B7LTG7|GHRB_ESCF3 Glyoxylate/hydroxypyruvate reductase B OS=Escherichia fergusonii
(strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=ghrB
PE=3 SV=1
Length = 324
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 110/212 (51%), Gaps = 4/212 (1%)
Query: 75 SVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLL 133
+VA+ + IL R + +V +GEW + G + D+ KT+G VG GRIG L
Sbjct: 102 TVADTLMALILATSRRVVEVAERVKAGEWTASIGPDWFGSDVHHKTLGIVGMGRIGMALA 161
Query: 134 QRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192
QR FN +LY+ R + PQ E+ A++ DLDT+L + D V + PLTE+T +F
Sbjct: 162 QRAHFGFNMPILYNAR-RQHPQAEERFNARYC-DLDTLLQEADFVCLILPLTEETHHLFG 219
Query: 193 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPN 252
++ AKMK + +N RG ++D +A++ A G I DV+ +P P D P MPN
Sbjct: 220 AEQFAKMKSSAIFINAGRGPVVDEKALISALQKGEIHAAGLDVFEREPLPVDSPLLAMPN 279
Query: 253 QAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKG 284
PH+ T + + AA D L +G
Sbjct: 280 VVALPHIGSATHETRYNMAACAVDNLIAALQG 311
>sp|B1L765|GYAR_KORCO Glyoxylate reductase OS=Korarchaeum cryptofilum (strain OPF8)
GN=gyaR PE=3 SV=1
Length = 332
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 127/248 (51%), Gaps = 6/248 (2%)
Query: 52 NPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA--GVA 109
N + A G+ V G + A+ ++ R + V G+W VA +
Sbjct: 80 NIDVKEATKRGIYVTNTPGVLTETTADFAFALLMAAARRVVEADRYVREGKWKVAWHPMM 139
Query: 110 YRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDT 169
YD+ G+T+G VG GRIG + +R K F +LY+D ++ + EKE G ++ L+
Sbjct: 140 MLGYDVYGRTLGIVGMGRIGAAVARRAKGFGMRILYYDSIRRE-DFEKELGVEYV-PLEK 197
Query: 170 MLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229
+L + D V ++ PLTE+T M ++++ +MK+ ++VN +RG ++D +A+ A G IA
Sbjct: 198 LLEESDFVSLHVPLTEETYHMIGEEQLRRMKRTAILVNTSRGKVVDQKALYKALKEGWIA 257
Query: 230 GYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFP- 288
G DV+ +P P D P + N + PH + + + + R A V + L + +GE P
Sbjct: 258 GAGLDVFEQEPIPPDDPLLKLENVVLAPHAASASHETRSRMAEMVAENLIAFKRGEIPPN 317
Query: 289 -VQNYIVK 295
V +VK
Sbjct: 318 LVNQEVVK 325
>sp|Q9YAW4|GYAR_AERPE Glyoxylate reductase OS=Aeropyrum pernix (strain ATCC 700893 / DSM
11879 / JCM 9820 / NBRC 100138 / K1) GN=gyaR PE=3 SV=2
Length = 335
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 124/251 (49%), Gaps = 9/251 (3%)
Query: 52 NPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYR 111
N + A G+ V G + AE IL R + H V GEW +
Sbjct: 81 NIDVECATRLGIYVTNTPGVLTEATAEFTWALILAAARRVVEADHFVRWGEWWRLRTGWH 140
Query: 112 -----AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEED 166
+L GKT+G +G GRIG + + K F ++YH R + ++EKE GA++
Sbjct: 141 PMMMLGVELRGKTLGILGMGRIGSRVAEIGKAFGMRIIYHSRSR-KREIEKELGAEYR-S 198
Query: 167 LDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 226
L+ +L + DI+ ++ PLT++TR + + + MKK ++VN RGAI+DT A+V A G
Sbjct: 199 LEDLLRESDILSIHLPLTDETRHLIGESELKLMKKTAILVNTGRGAIVDTGALVKALREG 258
Query: 227 HIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGED 286
IA + DV+ +P +HP N + PH + T + +LR A + L + +G+
Sbjct: 259 WIAAAALDVFEEEPLNPNHPLTAFKNVVLAPHAASATRETRLRMAMMAAENLVAFAQGKV 318
Query: 287 FP--VQNYIVK 295
P V +VK
Sbjct: 319 PPNLVNREVVK 329
>sp|Q5JEZ2|GYAR_PYRKO Glyoxylate reductase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=gyaR PE=3 SV=1
Length = 333
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 120/219 (54%), Gaps = 10/219 (4%)
Query: 84 ILILVRNFLPGHHQVISGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKP 138
+L R + H SGEW G+A+ YD+ GKT+G VG GRIG+ + +R +
Sbjct: 112 LLATARRLIEADHFTRSGEWKRRGIAWHPRWFLGYDVYGKTIGIVGFGRIGQAVARRARG 171
Query: 139 FNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAK 198
F +LY+ R + P+ EKE GA+F L+ +L + D VV+ PLT++T+ M +++R+
Sbjct: 172 FGMRILYYSRSR-KPEAEKELGAEFR-SLEDLLRESDFVVLAVPLTKETQYMINEERLRL 229
Query: 199 MKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPH 258
MKK ++VN ARG ++DT+A++ A G IAG DV+ +P + + + N + PH
Sbjct: 230 MKKTAILVNIARGKVVDTKALMKALKEGWIAGAGLDVYEEEPYYNEELFS-LKNVVLAPH 288
Query: 259 VSGTTIDAQLRYAAGVKDMLDRYFKGEDFP--VQNYIVK 295
+ T A+ A V L + GE P V +VK
Sbjct: 289 IGSATYGAREGMAELVARNLIAFKNGEVPPTLVNKEVVK 327
>sp|Q9C4M5|GYAR_THELI Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1
Length = 331
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 110/196 (56%), Gaps = 8/196 (4%)
Query: 98 VISGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMD 152
V SGEW + V + Y L+GKT+G VG GRIG+ L +R K F ++Y+ R +
Sbjct: 126 VRSGEWKKSEVGWHPLMFLGYGLKGKTLGIVGFGRIGQALAKRAKGFGMKIIYYSRTR-K 184
Query: 153 PQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGA 212
P+ E+E GA++ D +T+L + D + ++ PLT++T M + + MK +++N +RGA
Sbjct: 185 PEAEEEIGAEYV-DFETLLKESDFISLHVPLTKETYHMIGEKELKLMKPNAILINTSRGA 243
Query: 213 IMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAA 272
++DT A++ A G IAG DV+ +P + ++ + N + PH+ T +A+ A
Sbjct: 244 VVDTNALIKALKEGWIAGAGLDVFEEEPYYNEELFK-LKNVVLAPHIGSATHEAREGMAE 302
Query: 273 GVKDMLDRYFKGEDFP 288
V L + KGE P
Sbjct: 303 LVAKNLIAFAKGEIPP 318
>sp|P43885|SERA_HAEIN D-3-phosphoglycerate dehydrogenase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=serA PE=3
SV=1
Length = 410
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 126/253 (49%), Gaps = 15/253 (5%)
Query: 20 LRSSSRFSRHYASSGSKKI-VGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAE 78
LRS + + + K I VG F G +N AA A G+ V SN SVAE
Sbjct: 60 LRSRTHLTAEMIEAAPKLIAVGCFCIGTNQVDLN----AAKARGIPVFNAPFSNTRSVAE 115
Query: 79 DELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKP 138
L IL+L+RN + +V G WN + A ++++ GK +G +G G IG L +
Sbjct: 116 LVLGEILLLMRNVPQANAEVHRGVWNKS--ATGSHEVRGKKLGIIGYGHIGSQLSIIAES 173
Query: 139 FNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAK 198
++ ++D P AK L+ +L CD+V ++ P T+ + + RIA+
Sbjct: 174 LGMDVYFYDIENKLPL----GNAKQVRSLEELLSSCDVVSLHVPELPSTKNLMNVARIAQ 229
Query: 199 MKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDH----PWRYMPNQA 254
+K+G +++N ARG ++D A+ A G + G + DV+ +PA + P R N
Sbjct: 230 LKQGAILINAARGTVVDIDALAQALKDGKLQGAAIDVFPVEPASINEEFISPLREFDNVI 289
Query: 255 MTPHVSGTTIDAQ 267
+TPH+ G+T +AQ
Sbjct: 290 LTPHIGGSTAEAQ 302
>sp|A8ARD9|GHRB_CITK8 Glyoxylate/hydroxypyruvate reductase B OS=Citrobacter koseri
(strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=ghrB
PE=3 SV=1
Length = 324
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 108/213 (50%), Gaps = 4/213 (1%)
Query: 75 SVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLL 133
+VA+ + +L R + +V GEW + G + D+ KT+G VG GRIG L
Sbjct: 102 TVADTVMALVLSTARRVVEVAERVKVGEWTKSIGPDWFGTDVHHKTLGIVGMGRIGLALA 161
Query: 134 QRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192
QR FN +LY+ R + P+ E+ A++ DLDT+L D V + PLTE+T +F
Sbjct: 162 QRAHFGFNMPILYNAR-RHHPEAEERFNARYC-DLDTLLQAADFVCLILPLTEETHHLFG 219
Query: 193 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPN 252
+ AKMK + +N RG ++D A++ A SG I DV+ +P P D P +PN
Sbjct: 220 AAQFAKMKSSAIFINAGRGPVVDETALIAALQSGEIHAAGLDVFEQEPLPVDSPLLSLPN 279
Query: 253 QAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 285
PH+ T + + AA D L +G+
Sbjct: 280 VVALPHIGSATHETRYNMAACAVDNLIDALQGK 312
>sp|B5XMZ4|GHRB_KLEP3 Glyoxylate/hydroxypyruvate reductase B OS=Klebsiella pneumoniae
(strain 342) GN=ghrB PE=3 SV=1
Length = 323
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 4/212 (1%)
Query: 75 SVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLL 133
+VA+ + +L R + +V +GEW + G + D+ KT+G VG GRIG L
Sbjct: 102 TVADTVMALVLSTARRVVEVAERVKAGEWTKSIGPDWFGSDVHHKTLGIVGMGRIGMALA 161
Query: 134 QRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192
QR F +LY+ R + PQ E+ A++ DLDT+L + D V + PL+E+T +F
Sbjct: 162 QRAHFGFGMPILYNAR-RQHPQAEERFNARYC-DLDTLLQEADFVCLILPLSEETHHLFG 219
Query: 193 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPN 252
+ + AKMK + +N RG ++D QA++ A +G I DV+ +P KD P +PN
Sbjct: 220 QAQFAKMKSSAIFINAGRGPVVDEQALIAALQAGEIHAAGLDVFEHEPLAKDSPLLTLPN 279
Query: 253 QAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKG 284
PH+ T + + AA D L G
Sbjct: 280 VVALPHIGSATHETRYNMAACAVDNLIDALNG 311
>sp|A6TFG7|GHRB_KLEP7 Glyoxylate/hydroxypyruvate reductase B OS=Klebsiella pneumoniae
subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
GN=ghrB PE=3 SV=1
Length = 323
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 4/212 (1%)
Query: 75 SVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLL 133
+VA+ + +L R + +V +GEW + G + D+ KT+G VG GRIG L
Sbjct: 102 TVADTVMALVLSTARRVVEVAERVKAGEWTKSIGPDWFGTDVHHKTLGIVGMGRIGMALA 161
Query: 134 QRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192
QR F +LY+ R + PQ E+ A++ DLDT+L + D V + PL+E+T +F
Sbjct: 162 QRAHFGFGMPILYNAR-RQHPQAEERFNARYC-DLDTLLQEADFVCLILPLSEETHHLFG 219
Query: 193 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPN 252
+ + AKMK + +N RG ++D QA++ A +G I DV+ +P KD P +PN
Sbjct: 220 QAQFAKMKSSAIFINAGRGPVVDEQALIAALQNGEIHAAGLDVFEHEPLAKDSPLLSLPN 279
Query: 253 QAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKG 284
PH+ T + + AA D L G
Sbjct: 280 VVALPHIGSATHETRYNMAACAVDNLIDALNG 311
>sp|P0A544|SERA_MYCTU D-3-phosphoglycerate dehydrogenase OS=Mycobacterium tuberculosis
GN=serA PE=1 SV=1
Length = 528
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 98/180 (54%), Gaps = 3/180 (1%)
Query: 109 AYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLD 168
++ ++ GKTVG VG GRIG+L+ QR+ F ++ +D + P + G + LD
Sbjct: 133 SFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDP-YVSPARAAQLGIELLS-LD 190
Query: 169 TMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHI 228
+L + D + V+ P T +T G+ DK+ +AK K GV+IVN ARG ++D A+ DA + GH+
Sbjct: 191 DLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHV 250
Query: 229 AGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFP 288
DV+ +P D P + +TPH+ +T +AQ R V + + GE P
Sbjct: 251 RAAGLDVFATEPC-TDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEFVP 309
>sp|P0A545|SERA_MYCBO D-3-phosphoglycerate dehydrogenase OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=serA PE=3 SV=1
Length = 528
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 98/180 (54%), Gaps = 3/180 (1%)
Query: 109 AYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLD 168
++ ++ GKTVG VG GRIG+L+ QR+ F ++ +D + P + G + LD
Sbjct: 133 SFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDP-YVSPARAAQLGIELLS-LD 190
Query: 169 TMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHI 228
+L + D + V+ P T +T G+ DK+ +AK K GV+IVN ARG ++D A+ DA + GH+
Sbjct: 191 DLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHV 250
Query: 229 AGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFP 288
DV+ +P D P + +TPH+ +T +AQ R V + + GE P
Sbjct: 251 RAAGLDVFATEPC-TDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEFVP 309
>sp|O43175|SERA_HUMAN D-3-phosphoglycerate dehydrogenase OS=Homo sapiens GN=PHGDH PE=1
SV=4
Length = 533
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 130/270 (48%), Gaps = 10/270 (3%)
Query: 19 FLRSSSRFSRHYASSGSK-KIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVA 77
+RS+++ + ++ K ++VG G + N + AA G+ V N +S A
Sbjct: 52 IVRSATKVTADVINAAEKLQVVGRAGTGVD----NVDLEAATRKGILVMNTPNGNSLSAA 107
Query: 78 EDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK 137
E I+ L R + G+W + +L GKT+G +G GRIG+ + R++
Sbjct: 108 ELTCGMIMCLARQIPQATASMKDGKWERK--KFMGTELNGKTLGILGLGRIGREVATRMQ 165
Query: 138 PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIA 197
F + +D + + P++ G + + L+ + P CD + V+TPL T G+ + + A
Sbjct: 166 SFGMKTIGYDPI-ISPEVSASFGVQ-QLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFA 223
Query: 198 KMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTP 257
+ KKGV +VN ARG I+D A++ A SG AG + DV+ +P P+D N P
Sbjct: 224 QCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP-PRDRALVDHENVISCP 282
Query: 258 HVSGTTIDAQLRYAAGVKDMLDRYFKGEDF 287
H+ +T +AQ R + KG+
Sbjct: 283 HLGASTKEAQSRCGEEIAVQFVDMVKGKSL 312
>sp|A5A6P1|SERA_PANTR D-3-phosphoglycerate dehydrogenase OS=Pan troglodytes GN=PHGDH PE=2
SV=1
Length = 533
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 130/270 (48%), Gaps = 10/270 (3%)
Query: 19 FLRSSSRFSRHYASSGSK-KIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVA 77
+RS+++ + ++ K ++VG G + N + AA G+ V N +S A
Sbjct: 52 IVRSATKVTADVINAAEKLQVVGRAGTGVD----NVDLEAATRKGILVMNTPNGNSLSAA 107
Query: 78 EDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK 137
E I+ L R + G+W + +L GKT+G +G GRIG+ + R++
Sbjct: 108 ELTCGMIMCLARQIPQATASMKDGKWERK--KFMGTELNGKTLGILGLGRIGREVATRMQ 165
Query: 138 PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIA 197
F + +D + + P++ G + + L+ + P CD + V+TPL T G+ + + A
Sbjct: 166 SFGMKTIGYDPI-ISPEVSASFGVQ-QLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFA 223
Query: 198 KMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTP 257
+ KKGV +VN ARG I+D A++ A SG AG + DV+ +P P+D N P
Sbjct: 224 QCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP-PRDRALVDHENVISCP 282
Query: 258 HVSGTTIDAQLRYAAGVKDMLDRYFKGEDF 287
H+ +T +AQ R + KG+
Sbjct: 283 HLGASTKEAQSRCGEEIAVQFVDMVKGKSL 312
>sp|Q60HD7|SERA_MACFA D-3-phosphoglycerate dehydrogenase OS=Macaca fascicularis GN=PHGDH
PE=2 SV=4
Length = 533
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 130/270 (48%), Gaps = 10/270 (3%)
Query: 19 FLRSSSRFSRHYASSGSK-KIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVA 77
+RS+++ + ++ K ++VG G + N + AA G+ V N +S A
Sbjct: 52 IVRSATKVTADVINAAEKLQVVGRAGTGVD----NVDLEAATRKGVLVMNTPNGNSLSAA 107
Query: 78 EDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK 137
E I+ L R + G+W + +L GKT+G +G GRIG+ + R++
Sbjct: 108 ELTCGMIMCLARQIPQATASMKDGKWERK--KFMGTELNGKTLGILGLGRIGREVATRMQ 165
Query: 138 PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIA 197
F + +D + + P++ G + + L+ + P CD + V+TPL T G+ + + A
Sbjct: 166 SFGMKTIGYDPI-ISPEVSASFGVQ-QLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFA 223
Query: 198 KMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTP 257
+ KKGV +VN ARG I+D A++ A SG AG + DV+ +P P+D N P
Sbjct: 224 QCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP-PRDRALVDHENVISCP 282
Query: 258 HVSGTTIDAQLRYAAGVKDMLDRYFKGEDF 287
H+ +T +AQ R + KG+
Sbjct: 283 HLGASTKEAQSRCGEEIAVQFVDMVKGKSL 312
>sp|Q61753|SERA_MOUSE D-3-phosphoglycerate dehydrogenase OS=Mus musculus GN=Phgdh PE=1
SV=3
Length = 533
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 127/273 (46%), Gaps = 16/273 (5%)
Query: 19 FLRSSSRFSRHYASSGSK-KIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVA 77
+RS+++ + ++ K ++VG G + N + AA G+ V N +S A
Sbjct: 52 IVRSATKVTADVINAAEKLQVVGRAGTGVD----NVDLEAATRKGILVMNTPNGNSLSAA 107
Query: 78 EDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK 137
E I+ L R + G+W+ + +L GKT+G +G GRIG+ + R++
Sbjct: 108 ELTCGMIMCLARQIPQATASMKDGKWDRK--KFMGTELNGKTLGILGLGRIGREVATRMQ 165
Query: 138 PFNCNLLYHDRVKMDPQLEKETGAKF---EEDLDTMLPKCDIVVVNTPLTEKTRGMFDKD 194
F V DP + E A F + L+ + P CD + V+TPL T G+ +
Sbjct: 166 SFG-----MKTVGYDPIISPEVAASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDS 220
Query: 195 RIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQA 254
A+ KKGV +VN ARG I+D A++ A SG AG + DV+ +P P+D N
Sbjct: 221 TFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP-PRDRALVDHENVI 279
Query: 255 MTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDF 287
PH+ +T +AQ R + KG+
Sbjct: 280 SCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSL 312
>sp|O08651|SERA_RAT D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus GN=Phgdh
PE=1 SV=3
Length = 533
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 127/273 (46%), Gaps = 16/273 (5%)
Query: 19 FLRSSSRFSRHYASSGSK-KIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVA 77
+RS+++ + ++ K ++VG G + N + AA G+ V N +S A
Sbjct: 52 IVRSATKVTADVINAAEKLQVVGRAGTGVD----NVDLEAATRKGVLVMNTPNGNSLSAA 107
Query: 78 EDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK 137
E ++ L R + G+W+ + +L GKT+G +G GRIG+ + R++
Sbjct: 108 ELTCGMLMCLARQIPQATASMKDGKWDRK--KFMGTELNGKTLGILGLGRIGREVAARMQ 165
Query: 138 PFNCNLLYHDRVKMDPQLEKETGAKF---EEDLDTMLPKCDIVVVNTPLTEKTRGMFDKD 194
F V DP + E A F + L+ + P CD + V+TPL T G+ +
Sbjct: 166 AFG-----MKTVGYDPIISPEVAASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDS 220
Query: 195 RIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQA 254
A+ KKGV +VN ARG I+D A++ A SG AG + DV+ +P P+D N
Sbjct: 221 TFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP-PRDRALVDHENVI 279
Query: 255 MTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDF 287
PH+ +T +AQ R + KG+
Sbjct: 280 SCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSL 312
>sp|O33116|SERA_MYCLE D-3-phosphoglycerate dehydrogenase OS=Mycobacterium leprae (strain
TN) GN=serA PE=3 SV=1
Length = 528
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
Query: 109 AYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDL- 167
++ ++ GKTVG VG GRIG+L+ R+ F +++ +D P + A+ +L
Sbjct: 133 SFSGTEIFGKTVGVVGLGRIGQLVAARIAAFGAHVIAYD-----PYVAPARAAQLGIELM 187
Query: 168 --DTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 225
D +L + D + V+ P T +T G+ DK+ +AK K GV+IVN ARG ++D A+ DA S
Sbjct: 188 SFDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEVALADAVRS 247
Query: 226 GHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 285
GH+ DV+ +P D P + +TPH+ +T +AQ R V + + GE
Sbjct: 248 GHVRAAGLDVFATEPC-TDSPLFELSQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGE 306
Query: 286 DFP 288
P
Sbjct: 307 FVP 309
>sp|Q5EAD2|SERA_BOVIN D-3-phosphoglycerate dehydrogenase OS=Bos taurus GN=PHGDH PE=2 SV=3
Length = 533
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 10/268 (3%)
Query: 19 FLRSSSRFSRHYASSGSK-KIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVA 77
+RS+++ + ++ K ++VG G + N + AA G+ V N +S A
Sbjct: 52 IVRSATKVTSDIINAAEKLQVVGRAGTGVD----NVDLEAATRKGILVMNTPNGNSLSAA 107
Query: 78 EDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK 137
E I+ L R + G+W + +L GK +G +G GRIG+ + R++
Sbjct: 108 ELTCGMIMCLARQIPQAAASMKDGKWERK--KFMGTELNGKVLGILGLGRIGREVATRMQ 165
Query: 138 PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIA 197
F + +D + + P++ G + + L+ + P CD + V+TPL T G+ + A
Sbjct: 166 SFGMKTIGYDPI-ISPEVSASFGVQ-QLPLEQIWPLCDFITVHTPLLPSTTGLLNDSTFA 223
Query: 198 KMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTP 257
+ KKGV +VN ARG I+D A++ A SG AG + DV+ +P P+D N P
Sbjct: 224 QCKKGVCVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP-PRDRALVNHENVISCP 282
Query: 258 HVSGTTIDAQLRYAAGVKDMLDRYFKGE 285
H+ +T +AQ R + KG+
Sbjct: 283 HLGASTKEAQSRCGEEIALQFVDMVKGK 310
>sp|A7MKR1|GHRB_CROS8 Glyoxylate/hydroxypyruvate reductase B OS=Cronobacter sakazakii
(strain ATCC BAA-894) GN=ghrB PE=3 SV=1
Length = 324
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 107/213 (50%), Gaps = 4/213 (1%)
Query: 75 SVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLL 133
+VA+ + +L R L +V +GEW + G + D+ KT+G VG GRIG L
Sbjct: 102 TVADTLMTLVLTTARRALEVAERVKAGEWTGSIGPDWFGCDVHHKTLGIVGMGRIGLALA 161
Query: 134 QRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192
QR FN +LY+ R + + E+ A++ DLDT+L + D V V PLT++T M
Sbjct: 162 QRAHFGFNMPILYNAR-RHHSEAEERFNARYC-DLDTLLAESDFVCVILPLTDETHHMIG 219
Query: 193 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPN 252
++ KMKK + +N RG ++D A++ A SG I DV+ +P KD P M N
Sbjct: 220 AEQFRKMKKSAIFINAGRGPVVDENALIAALQSGEIHAAGLDVFEQEPLSKDSPLLTMKN 279
Query: 253 QAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 285
PH+ T + + AA D L G+
Sbjct: 280 VVALPHIGSATHETRYNMAACAVDNLINALNGD 312
>sp|Q9P7P8|DDH1_SCHPO 2-hydroxyacid dehydrogenase homolog 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC186.07c PE=3 SV=1
Length = 332
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 19/229 (8%)
Query: 52 NPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYR 111
N + AAA G+TV V + +VAE + +L L R + +V ++N+ G+
Sbjct: 81 NVDLKAAADNGITVVRVPAYSPYAVAEYTIGLLLSLNRKIHRAYVRVREDDFNLNGLL-- 138
Query: 112 AYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTM 170
+DL GKT+G +G GRIG L+ + LK F C +L HD +K + +LEK G +F E + +
Sbjct: 139 GHDLHGKTIGLLGTGRIGGLVAKCLKLGFGCEVLAHD-IKPNKELEK-FGIQFVEQQE-V 195
Query: 171 LPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAG 230
L K D + ++ PLT T + D+ +A MKKGV I+N +RG ++DT+A+V A SG + G
Sbjct: 196 LAKADFLCLHCPLTPDTEHLVDEKLLASMKKGVKIINTSRGGLVDTKALVKAIESGQVGG 255
Query: 231 YSGDVWNPQ----------PAPKDHPWRYM---PNQAMTPHVSGTTIDA 266
+ DV+ + KD ++ + PN +T H + T +A
Sbjct: 256 CAMDVYEGERRLFYRDLSNEVIKDTTFQQLANFPNVLVTSHQAFFTAEA 304
>sp|P87228|SERA_SCHPO Putative D-3-phosphoglycerate dehydrogenase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC364.07 PE=1 SV=1
Length = 466
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 132/276 (47%), Gaps = 23/276 (8%)
Query: 20 LRSSSRFSRHYASSGSKKIV-GVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAE 78
+RS +R +R + IV G F G ++ AA G+ V +N SVAE
Sbjct: 103 IRSKTRLTRRVLEAADSLIVIGCFCIGTNQVDLD----FAAERGIAVFNSPYANSRSVAE 158
Query: 79 DELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKP 138
+ I+ L R ++ GEWN V+ +++ GKT+G +G G IG L +
Sbjct: 159 LVIGYIISLARQVGDRSLELHRGEWN--KVSSGCWEIRGKTLGIIGYGHIGSQLSVLAEA 216
Query: 139 FNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAK 198
+++Y+D + + P AK L +L + D V ++ P + +T+ M A
Sbjct: 217 MGLHVVYYDILPIMPL----GSAKQLSSLPELLHRADFVSLHVPASPETKNMISSKEFAA 272
Query: 199 MKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA--PKD------HPW--- 247
MK+G ++N +RG ++D A+VDA SG IAG + DV+ +PA KD + W
Sbjct: 273 MKEGSYLINASRGTVVDIPALVDASKSGKIAGAAIDVYPSEPAGNGKDKFVDSLNSWTSE 332
Query: 248 -RYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYF 282
+ N +TPH+ G+T +AQ V + L RY
Sbjct: 333 LTHCKNIILTPHIGGSTEEAQYNIGIEVSEALTRYI 368
>sp|A4W577|GHRB_ENT38 Glyoxylate/hydroxypyruvate reductase B OS=Enterobacter sp. (strain
638) GN=ghrB PE=3 SV=1
Length = 324
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 107/212 (50%), Gaps = 4/212 (1%)
Query: 75 SVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLL 133
+VA+ + +L R + +V +GEW + G + D+ GKT+G VG GRIG L
Sbjct: 102 TVADTLMALVLSTARRVVEVAERVKAGEWTKSIGPDWFGVDVHGKTLGIVGMGRIGLALA 161
Query: 134 QRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192
QR FN +LY+ R + + E+ A++ E L+T+L + D V + PLT++T +
Sbjct: 162 QRAHFGFNMPILYNAR-RHHSEAEERFEARYCE-LETLLQEADYVCLILPLTDETHHLIG 219
Query: 193 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPN 252
K KMKK + +N RG ++D +A+++A G I DV+ +P P D P M N
Sbjct: 220 KAEFEKMKKSAIFINAGRGPVVDEKALIEALQKGEIHAAGLDVFEQEPLPVDSPLLTMSN 279
Query: 253 QAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKG 284
PH+ T + + AA D L G
Sbjct: 280 VVSLPHIGSATHETRYNMAATAVDNLINALNG 311
>sp|Q83PR3|GHRB_SHIFL Glyoxylate/hydroxypyruvate reductase B OS=Shigella flexneri GN=ghrB
PE=3 SV=4
Length = 324
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 108/213 (50%), Gaps = 4/213 (1%)
Query: 75 SVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLL 133
+VA+ + +L R + +V +GEW + G + D+ KT+G VG GRIG L
Sbjct: 102 TVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALA 161
Query: 134 QRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192
QR+ FN +LY+ R + + E+ A++ DLDT+L + D V + PLT++T +F
Sbjct: 162 QRVHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFG 219
Query: 193 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPN 252
++ AKMK + +N RG ++D A++ A G I DV+ +P D P M N
Sbjct: 220 AEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMAN 279
Query: 253 QAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 285
PH+ T + + AA D L +G+
Sbjct: 280 VVAVPHIGSATHETRYGMAACAVDNLIDALQGK 312
>sp|B5EX58|GHRB_SALA4 Glyoxylate/hydroxypyruvate reductase B OS=Salmonella agona (strain
SL483) GN=ghrB PE=3 SV=1
Length = 324
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 105/213 (49%), Gaps = 4/213 (1%)
Query: 75 SVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLL 133
+VA+ + +L R + +V +GEW + G A+ D+ KT+G VG GRIG L
Sbjct: 102 TVADTVMALMLTTARRVVDVAERVKAGEWTESIGPAWFGIDVHHKTLGIVGMGRIGMALA 161
Query: 134 QRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192
QR F +LYH R + + E A++ DLDT+L + D V V PLT +TR +F
Sbjct: 162 QRAHFGFTMPVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTAETRHLFG 219
Query: 193 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPN 252
+ A+MK + +N RG ++D A++ A +G I DV+ +P D P M N
Sbjct: 220 ATQFARMKSSAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSN 279
Query: 253 QAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 285
PH+ T + + A D L +G+
Sbjct: 280 VVAVPHIGSATHETRYNMMACAVDNLIDALQGK 312
>sp|O04130|SERA_ARATH D-3-phosphoglycerate dehydrogenase, chloroplastic OS=Arabidopsis
thaliana GN=At1g17745 PE=1 SV=2
Length = 624
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 16/272 (5%)
Query: 19 FLRSSSRFSRHY--ASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSV 76
+RS ++ +R A+ G K+VG G + N + AA G V +N V+
Sbjct: 127 IVRSGTKVTREVFEAAKGRLKVVGRAGVGID----NVDLQAATEHGCLVVNAPTANTVAA 182
Query: 77 AEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRL 136
AE + + + RN + +G+W + Y L GKT+ +G G++G + +R
Sbjct: 183 AEHGIALLASMARNVAQADASIKAGKWERS--KYVGVSLVGKTLAVMGFGKVGTEVARRA 240
Query: 137 KPFNCNLLYHDRVKMDPQLEKETGAKFEEDL---DTMLPKCDIVVVNTPLTEKTRGMFDK 193
K ++ HD P + DL D + D V ++ PLT T+ +F+
Sbjct: 241 KGLGMTVISHD-----PYAPADRARALGVDLVSFDQAISTADFVSLHMPLTPATKKVFND 295
Query: 194 DRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQ 253
+ +KMKKGV ++N ARG ++D A+V A +G +A + DV+ +P KD N
Sbjct: 296 ETFSKMKKGVRLINVARGGVIDEDALVRALDAGIVAQAALDVFCEEPPSKDSRLIQHENV 355
Query: 254 AMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 285
+TPH+ +T +AQ A + + + KGE
Sbjct: 356 TVTPHLGASTKEAQEGVAIEIAEAVAGALKGE 387
>sp|B1LJB3|GHRB_ECOSM Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=ghrB PE=3 SV=1
Length = 324
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 108/213 (50%), Gaps = 4/213 (1%)
Query: 75 SVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLL 133
+VA+ + +L R + +V +GEW + G + D+ KT+G VG GRIG L
Sbjct: 102 TVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALA 161
Query: 134 QRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192
QR + FN +LY+ R + + E+ A++ DLDT+L + D V + PLT++T +F
Sbjct: 162 QRAQFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFG 219
Query: 193 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPN 252
++ AKMK + +N RG ++D A++ A G I DV+ +P D P M N
Sbjct: 220 AEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMAN 279
Query: 253 QAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 285
PH+ T + + AA D L +G+
Sbjct: 280 VVAVPHIGSATHETRYGMAACAVDNLIDALQGK 312
>sp|B4TZ41|GHRB_SALSV Glyoxylate/hydroxypyruvate reductase B OS=Salmonella schwarzengrund
(strain CVM19633) GN=ghrB PE=3 SV=1
Length = 324
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 105/213 (49%), Gaps = 4/213 (1%)
Query: 75 SVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLL 133
+VA+ + +L R + +V +GEW + G A+ D+ KT+G VG GRIG L
Sbjct: 102 TVADTVMALMLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALA 161
Query: 134 QRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192
QR F +LYH R + + E A++ DLDT+L + D V V PLT +TR +F
Sbjct: 162 QRAHFGFTMPVLYHAR-RRHQEAEDRFNARYC-DLDTLLQEADFVCVILPLTAETRHLFG 219
Query: 193 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPN 252
+ A+MK + +N RG ++D A++ A +G I DV+ +P D P M N
Sbjct: 220 ATQFARMKSSAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSN 279
Query: 253 QAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 285
PH+ T + + A D L +G+
Sbjct: 280 VVAVPHIGSATHETRYNMMACAVDNLIDALQGK 312
>sp|B1IZP1|GHRB_ECOLC Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain
ATCC 8739 / DSM 1576 / Crooks) GN=ghrB PE=3 SV=1
Length = 324
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 4/213 (1%)
Query: 75 SVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLL 133
+VA+ + +L R + +V +GEW + G + D+ KT+G VG GRIG L
Sbjct: 102 TVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALA 161
Query: 134 QRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192
QR FN +LY+ R + + E+ A++ DLDT+L + D V + PLT++T +F
Sbjct: 162 QRAHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFG 219
Query: 193 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPN 252
++ AKMK + +N RG ++D A++ A G I DV+ +P D P M N
Sbjct: 220 AEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMAN 279
Query: 253 QAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE 285
PH+ T + + AA D L +G+
Sbjct: 280 VVAVPHIGSATYETRYGMAACAVDNLIDALQGK 312
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,186,014
Number of Sequences: 539616
Number of extensions: 4689649
Number of successful extensions: 12593
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 11740
Number of HSP's gapped (non-prelim): 443
length of query: 304
length of database: 191,569,459
effective HSP length: 117
effective length of query: 187
effective length of database: 128,434,387
effective search space: 24017230369
effective search space used: 24017230369
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)