Query 021995
Match_columns 304
No_of_seqs 310 out of 2350
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 12:25:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021995.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021995hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jtm_A Formate dehydrogenase, 100.0 4.6E-66 1.6E-70 486.9 27.9 277 24-304 74-351 (351)
2 3kb6_A D-lactate dehydrogenase 100.0 4.6E-65 1.6E-69 477.6 22.2 267 20-294 48-331 (334)
3 4g2n_A D-isomer specific 2-hyd 100.0 3.6E-63 1.2E-67 465.9 29.8 263 18-287 74-340 (345)
4 4hy3_A Phosphoglycerate oxidor 100.0 7.1E-62 2.4E-66 459.8 29.2 274 22-304 82-358 (365)
5 4e5n_A Thermostable phosphite 100.0 4.4E-62 1.5E-66 456.8 26.9 265 18-287 48-321 (330)
6 3gg9_A D-3-phosphoglycerate de 100.0 7.3E-62 2.5E-66 458.6 27.1 270 21-296 56-338 (352)
7 2j6i_A Formate dehydrogenase; 100.0 9.5E-62 3.3E-66 460.2 26.7 276 24-303 72-357 (364)
8 4dgs_A Dehydrogenase; structur 100.0 1E-61 3.5E-66 455.2 25.2 259 18-287 74-335 (340)
9 3evt_A Phosphoglycerate dehydr 100.0 6E-62 2.1E-66 454.4 22.1 270 18-297 43-314 (324)
10 2pi1_A D-lactate dehydrogenase 100.0 3.4E-62 1.2E-66 458.2 19.4 266 21-296 49-330 (334)
11 3k5p_A D-3-phosphoglycerate de 100.0 6.2E-61 2.1E-65 459.1 27.8 267 20-296 64-336 (416)
12 2nac_A NAD-dependent formate d 100.0 1.8E-60 6.3E-65 454.1 28.7 274 24-301 101-375 (393)
13 3hg7_A D-isomer specific 2-hyd 100.0 5.2E-61 1.8E-65 447.7 21.8 258 25-297 56-314 (324)
14 1sc6_A PGDH, D-3-phosphoglycer 100.0 2.2E-60 7.4E-65 456.0 25.8 264 20-293 53-322 (404)
15 2yq5_A D-isomer specific 2-hyd 100.0 2.2E-60 7.4E-65 446.7 19.4 259 20-287 51-327 (343)
16 1j4a_A D-LDH, D-lactate dehydr 100.0 4.2E-59 1.4E-63 437.5 23.4 262 21-293 53-330 (333)
17 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 1.2E-58 4E-63 434.2 25.6 258 21-287 74-332 (335)
18 3pp8_A Glyoxylate/hydroxypyruv 100.0 3.8E-59 1.3E-63 434.1 21.0 258 27-298 51-314 (315)
19 1wwk_A Phosphoglycerate dehydr 100.0 5.6E-58 1.9E-62 425.4 25.6 255 22-284 52-307 (307)
20 1dxy_A D-2-hydroxyisocaproate 100.0 1.1E-58 3.6E-63 434.7 19.7 263 21-295 51-330 (333)
21 1gdh_A D-glycerate dehydrogena 100.0 2.8E-57 9.5E-62 422.9 28.3 260 21-287 51-314 (320)
22 1mx3_A CTBP1, C-terminal bindi 100.0 3.7E-57 1.3E-61 425.9 29.3 270 20-294 69-346 (347)
23 1xdw_A NAD+-dependent (R)-2-hy 100.0 4.3E-58 1.5E-62 430.3 20.2 258 21-287 52-326 (331)
24 2ekl_A D-3-phosphoglycerate de 100.0 1.8E-57 6.2E-62 423.0 24.3 256 21-287 53-312 (313)
25 2cuk_A Glycerate dehydrogenase 100.0 7.2E-57 2.5E-61 418.5 27.2 255 21-287 50-306 (311)
26 3ba1_A HPPR, hydroxyphenylpyru 100.0 1.6E-56 5.6E-61 419.5 26.6 256 21-287 72-328 (333)
27 1qp8_A Formate dehydrogenase; 100.0 6.5E-57 2.2E-61 417.3 23.0 257 28-301 43-302 (303)
28 2w2k_A D-mandelate dehydrogena 100.0 2.8E-55 9.5E-60 413.8 26.4 266 23-295 66-339 (348)
29 2d0i_A Dehydrogenase; structur 100.0 3.2E-55 1.1E-59 411.1 25.2 267 18-294 45-318 (333)
30 2gcg_A Glyoxylate reductase/hy 100.0 1.6E-54 5.6E-59 405.9 28.2 266 21-293 60-328 (330)
31 2dbq_A Glyoxylate reductase; D 100.0 1.4E-54 4.8E-59 406.9 25.4 265 21-294 52-322 (334)
32 3gvx_A Glycerate dehydrogenase 100.0 1.6E-55 5.4E-60 405.1 17.9 238 32-286 46-284 (290)
33 3oet_A Erythronate-4-phosphate 100.0 7.6E-54 2.6E-58 405.9 18.0 236 20-286 46-285 (381)
34 1ygy_A PGDH, D-3-phosphoglycer 100.0 6.7E-52 2.3E-56 410.3 29.5 259 20-287 50-309 (529)
35 2o4c_A Erythronate-4-phosphate 100.0 2.1E-51 7E-56 389.9 21.6 237 20-287 43-283 (380)
36 1v8b_A Adenosylhomocysteinase; 100.0 6.4E-36 2.2E-40 290.4 5.5 225 34-287 192-426 (479)
37 3d64_A Adenosylhomocysteinase; 100.0 3.4E-36 1.2E-40 293.3 3.2 224 34-287 212-441 (494)
38 3d4o_A Dipicolinate synthase s 99.9 5.8E-25 2E-29 202.1 12.9 157 22-213 82-248 (293)
39 3ce6_A Adenosylhomocysteinase; 99.9 1.8E-25 6.1E-30 218.4 2.9 217 41-287 217-441 (494)
40 2vhw_A Alanine dehydrogenase; 99.9 1E-22 3.4E-27 193.5 14.6 219 13-265 63-307 (377)
41 2rir_A Dipicolinate synthase, 99.9 4.3E-22 1.5E-26 183.5 10.0 159 26-213 88-250 (300)
42 1gtm_A Glutamate dehydrogenase 99.8 5.1E-21 1.7E-25 183.6 2.4 155 112-282 206-385 (419)
43 2eez_A Alanine dehydrogenase; 99.8 9.3E-20 3.2E-24 172.6 8.6 244 13-287 62-336 (369)
44 3h9u_A Adenosylhomocysteinase; 99.7 3.3E-18 1.1E-22 163.8 11.0 145 57-222 167-312 (436)
45 1x13_A NAD(P) transhydrogenase 99.7 5E-18 1.7E-22 162.4 7.6 193 12-215 68-300 (401)
46 3n58_A Adenosylhomocysteinase; 99.7 2.5E-17 8.6E-22 157.6 10.2 105 112-221 242-347 (464)
47 1gpj_A Glutamyl-tRNA reductase 99.6 3.5E-18 1.2E-22 163.6 -3.3 215 34-286 80-326 (404)
48 3gvp_A Adenosylhomocysteinase 99.6 3.9E-16 1.3E-20 149.1 10.5 140 60-220 179-319 (435)
49 1l7d_A Nicotinamide nucleotide 99.6 4.2E-15 1.4E-19 141.3 11.4 188 17-212 69-299 (384)
50 3obb_A Probable 3-hydroxyisobu 99.6 5.9E-15 2E-19 135.9 8.6 115 118-234 4-120 (300)
51 4gbj_A 6-phosphogluconate dehy 99.5 1E-14 3.6E-19 134.0 9.9 115 118-234 6-120 (297)
52 3ggo_A Prephenate dehydrogenas 99.5 1.9E-13 6.5E-18 126.5 14.3 165 99-269 16-188 (314)
53 3qha_A Putative oxidoreductase 99.5 1.6E-13 5.6E-18 125.7 11.1 111 117-229 15-125 (296)
54 3l6d_A Putative oxidoreductase 99.5 6.2E-14 2.1E-18 129.1 7.2 119 114-234 6-124 (306)
55 4dll_A 2-hydroxy-3-oxopropiona 99.5 1.3E-13 4.4E-18 127.8 9.2 116 114-229 28-144 (320)
56 3doj_A AT3G25530, dehydrogenas 99.5 1.2E-13 4.1E-18 127.4 8.8 117 113-229 17-135 (310)
57 3qsg_A NAD-binding phosphogluc 99.4 2.5E-13 8.5E-18 125.4 10.7 129 96-226 3-134 (312)
58 2g5c_A Prephenate dehydrogenas 99.4 1.2E-12 4E-17 118.5 14.0 141 118-262 2-150 (281)
59 3pef_A 6-phosphogluconate dehy 99.4 1.9E-13 6.6E-18 124.4 8.5 112 118-229 2-115 (287)
60 4e21_A 6-phosphogluconate dehy 99.4 3.1E-13 1.1E-17 127.3 9.3 121 115-237 20-143 (358)
61 2h78_A Hibadh, 3-hydroxyisobut 99.4 2.4E-13 8.3E-18 124.4 7.5 112 118-229 4-117 (302)
62 3pdu_A 3-hydroxyisobutyrate de 99.4 2.1E-13 7.3E-18 124.1 6.7 112 118-229 2-115 (287)
63 3g0o_A 3-hydroxyisobutyrate de 99.4 3.1E-13 1.1E-17 124.0 6.7 113 117-229 7-122 (303)
64 4e12_A Diketoreductase; oxidor 99.4 7.4E-12 2.5E-16 113.9 14.1 140 118-269 5-169 (283)
65 3b1f_A Putative prephenate deh 99.4 2.4E-12 8.1E-17 117.0 10.7 142 117-262 6-158 (290)
66 1c1d_A L-phenylalanine dehydro 99.3 4.7E-12 1.6E-16 118.8 12.1 108 114-229 172-280 (355)
67 4ezb_A Uncharacterized conserv 99.3 3.7E-12 1.3E-16 117.9 10.7 109 117-229 24-141 (317)
68 3ktd_A Prephenate dehydrogenas 99.3 2.7E-12 9.4E-17 120.0 6.9 140 117-261 8-155 (341)
69 4gwg_A 6-phosphogluconate dehy 99.3 1.2E-11 4.1E-16 120.6 10.2 119 117-236 4-130 (484)
70 1vpd_A Tartronate semialdehyde 99.3 4.2E-12 1.4E-16 115.6 6.5 112 118-229 6-119 (299)
71 2zyd_A 6-phosphogluconate dehy 99.3 1.1E-11 3.9E-16 120.9 9.8 114 115-229 13-133 (480)
72 3p2y_A Alanine dehydrogenase/p 99.2 1.2E-11 4.2E-16 116.8 8.7 181 14-209 82-302 (381)
73 3cky_A 2-hydroxymethyl glutara 99.2 1.1E-11 3.7E-16 113.0 7.9 112 118-229 5-118 (301)
74 1yb4_A Tartronic semialdehyde 99.2 1E-11 3.6E-16 112.7 7.2 111 118-229 4-116 (295)
75 4dio_A NAD(P) transhydrogenase 99.2 1.8E-11 6.2E-16 116.5 9.0 181 17-212 92-317 (405)
76 2f1k_A Prephenate dehydrogenas 99.2 1.2E-10 4.1E-15 105.0 13.8 143 118-267 1-148 (279)
77 1np3_A Ketol-acid reductoisome 99.2 1.2E-12 4E-17 122.4 0.3 137 114-261 13-156 (338)
78 2p4q_A 6-phosphogluconate dehy 99.2 2.9E-11 1E-15 118.5 10.2 112 117-229 10-129 (497)
79 2gf2_A Hibadh, 3-hydroxyisobut 99.2 1.2E-11 4.3E-16 112.4 6.8 109 118-226 1-111 (296)
80 3ond_A Adenosylhomocysteinase; 99.2 3.9E-11 1.3E-15 116.5 10.2 95 113-212 261-355 (488)
81 2cvz_A Dehydrogenase, 3-hydrox 99.2 2.3E-11 7.9E-16 110.0 8.1 108 118-228 2-109 (289)
82 2uyy_A N-PAC protein; long-cha 99.2 3.3E-11 1.1E-15 110.8 8.5 112 118-229 31-144 (316)
83 2pv7_A T-protein [includes: ch 99.2 9.6E-11 3.3E-15 107.3 10.5 135 95-259 6-142 (298)
84 3dtt_A NADP oxidoreductase; st 99.2 1.6E-11 5.4E-16 109.4 4.7 98 111-211 13-126 (245)
85 2iz1_A 6-phosphogluconate dehy 99.2 6E-11 2E-15 115.6 8.8 112 118-230 6-124 (474)
86 2pgd_A 6-phosphogluconate dehy 99.1 1E-10 3.4E-15 114.2 10.0 112 118-230 3-122 (482)
87 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.1 1.4E-10 4.6E-15 113.2 9.0 112 118-230 2-124 (478)
88 1i36_A Conserved hypothetical 99.1 1E-10 3.5E-15 104.6 6.2 103 118-226 1-105 (264)
89 2dpo_A L-gulonate 3-dehydrogen 99.1 7.9E-10 2.7E-14 102.4 11.7 141 117-269 6-171 (319)
90 3fr7_A Putative ketol-acid red 99.1 1E-10 3.5E-15 113.0 5.8 98 112-212 48-157 (525)
91 2yjz_A Metalloreductase steap4 98.6 1.7E-11 6E-16 106.2 0.0 94 115-214 17-110 (201)
92 3d1l_A Putative NADP oxidoredu 99.1 1.9E-10 6.5E-15 103.1 6.7 101 114-216 7-109 (266)
93 1zej_A HBD-9, 3-hydroxyacyl-CO 99.0 7.9E-10 2.7E-14 101.2 10.8 137 116-269 11-155 (293)
94 2q3e_A UDP-glucose 6-dehydroge 99.0 3E-10 1E-14 110.4 7.2 136 118-255 6-181 (467)
95 2d5c_A AROE, shikimate 5-dehyd 99.0 8.8E-10 3E-14 99.0 9.1 107 114-228 114-223 (263)
96 3oj0_A Glutr, glutamyl-tRNA re 99.0 9.2E-10 3.2E-14 89.7 7.6 89 117-211 21-112 (144)
97 3k6j_A Protein F01G10.3, confi 99.0 4.4E-09 1.5E-13 101.8 13.5 180 68-269 11-214 (460)
98 1leh_A Leucine dehydrogenase; 99.0 8.1E-10 2.8E-14 104.0 7.8 108 114-229 170-279 (364)
99 2hk9_A Shikimate dehydrogenase 98.9 1.3E-09 4.6E-14 98.6 8.0 106 114-226 126-234 (275)
100 3c24_A Putative oxidoreductase 98.9 6.2E-10 2.1E-14 101.0 5.2 94 118-214 12-106 (286)
101 2izz_A Pyrroline-5-carboxylate 98.9 1.7E-09 5.7E-14 100.1 8.0 107 115-225 20-132 (322)
102 2vns_A Metalloreductase steap3 98.9 8.4E-10 2.9E-14 96.3 5.5 95 116-215 27-121 (215)
103 2ahr_A Putative pyrroline carb 98.9 2.7E-09 9.4E-14 95.1 8.9 101 118-226 4-105 (259)
104 3gt0_A Pyrroline-5-carboxylate 98.9 1.1E-09 3.9E-14 97.2 5.8 104 118-225 3-111 (247)
105 3tri_A Pyrroline-5-carboxylate 98.9 3.1E-09 1.1E-13 96.5 8.0 105 117-225 3-112 (280)
106 1f0y_A HCDH, L-3-hydroxyacyl-C 98.9 1.5E-08 5.1E-13 92.6 12.4 104 118-223 16-148 (302)
107 2raf_A Putative dinucleotide-b 98.9 3.4E-09 1.2E-13 92.1 7.5 80 113-213 15-94 (209)
108 3pid_A UDP-glucose 6-dehydroge 98.9 5.3E-09 1.8E-13 100.5 9.5 116 111-228 30-172 (432)
109 1yqg_A Pyrroline-5-carboxylate 98.8 4.8E-09 1.6E-13 93.5 7.8 100 118-226 1-103 (263)
110 2i99_A MU-crystallin homolog; 98.8 3.1E-09 1.1E-13 98.0 6.6 111 115-234 133-248 (312)
111 1mv8_A GMD, GDP-mannose 6-dehy 98.8 7.1E-09 2.4E-13 99.8 7.6 107 118-225 1-140 (436)
112 4a7p_A UDP-glucose dehydrogena 98.8 2.2E-08 7.4E-13 96.8 10.9 107 118-225 9-145 (446)
113 3gg2_A Sugar dehydrogenase, UD 98.8 1.6E-08 5.4E-13 97.9 9.0 107 118-225 3-138 (450)
114 1jay_A Coenzyme F420H2:NADP+ o 98.7 5.6E-09 1.9E-13 90.1 4.6 116 118-241 1-137 (212)
115 1pjc_A Protein (L-alanine dehy 98.7 4.6E-08 1.6E-12 91.9 10.9 185 13-210 63-268 (361)
116 3k96_A Glycerol-3-phosphate de 98.7 3.3E-08 1.1E-12 92.8 9.0 98 117-216 29-140 (356)
117 1z82_A Glycerol-3-phosphate de 98.7 3E-08 1E-12 91.9 8.4 101 117-224 14-127 (335)
118 1dlj_A UDP-glucose dehydrogena 98.7 5.5E-08 1.9E-12 92.7 10.4 106 118-226 1-134 (402)
119 3mog_A Probable 3-hydroxybutyr 98.7 6.6E-08 2.3E-12 94.3 10.9 116 117-237 5-145 (483)
120 1bg6_A N-(1-D-carboxylethyl)-L 98.7 4.3E-08 1.5E-12 91.0 9.1 105 118-225 5-124 (359)
121 4huj_A Uncharacterized protein 98.7 2.9E-08 1E-12 86.7 7.5 90 117-212 23-116 (220)
122 1txg_A Glycerol-3-phosphate de 98.7 2E-08 6.7E-13 92.5 6.5 105 118-225 1-124 (335)
123 2rcy_A Pyrroline carboxylate r 98.7 2.7E-08 9.2E-13 88.6 6.8 99 117-226 4-106 (262)
124 2ew2_A 2-dehydropantoate 2-red 98.6 4.6E-08 1.6E-12 88.9 7.4 108 118-228 4-126 (316)
125 1evy_A Glycerol-3-phosphate de 98.6 1.4E-08 4.9E-13 95.1 3.9 95 119-214 17-129 (366)
126 1x0v_A GPD-C, GPDH-C, glycerol 98.6 4.3E-08 1.5E-12 91.1 7.0 95 117-213 8-128 (354)
127 1yj8_A Glycerol-3-phosphate de 98.6 3.5E-08 1.2E-12 92.8 6.4 94 118-213 22-145 (375)
128 2y0c_A BCEC, UDP-glucose dehyd 98.6 6.2E-08 2.1E-12 94.4 8.1 107 117-224 8-143 (478)
129 3phh_A Shikimate dehydrogenase 98.6 1.4E-07 4.6E-12 85.3 9.1 104 117-225 118-222 (269)
130 1zcj_A Peroxisomal bifunctiona 98.6 4E-07 1.4E-11 88.3 12.7 116 117-236 37-174 (463)
131 1y81_A Conserved hypothetical 98.6 1.3E-07 4.4E-12 77.0 7.5 103 115-229 12-118 (138)
132 3g79_A NDP-N-acetyl-D-galactos 98.5 1.4E-07 4.9E-12 91.7 8.6 105 117-222 18-160 (478)
133 2o3j_A UDP-glucose 6-dehydroge 98.5 7.7E-08 2.6E-12 93.8 6.6 107 118-225 10-151 (481)
134 1wdk_A Fatty oxidation complex 98.5 2.2E-07 7.6E-12 94.7 10.0 117 117-237 314-454 (715)
135 1ks9_A KPA reductase;, 2-dehyd 98.5 8E-08 2.7E-12 86.3 5.5 92 118-212 1-100 (291)
136 2dc1_A L-aspartate dehydrogena 98.5 2.8E-07 9.6E-12 81.2 8.6 99 118-229 1-104 (236)
137 2i76_A Hypothetical protein; N 98.5 5.4E-08 1.8E-12 87.8 3.9 87 118-212 3-92 (276)
138 3don_A Shikimate dehydrogenase 98.5 9.7E-08 3.3E-12 86.6 5.2 108 114-226 114-225 (277)
139 2wtb_A MFP2, fatty acid multif 98.5 5.7E-07 2E-11 91.8 11.3 116 118-237 313-452 (725)
140 3ojo_A CAP5O; rossmann fold, c 98.5 2.7E-07 9.2E-12 88.7 8.4 110 115-224 9-144 (431)
141 3c85_A Putative glutathione-re 98.5 1.2E-07 4.1E-12 79.9 4.8 95 113-209 35-139 (183)
142 3u62_A Shikimate dehydrogenase 98.5 1.7E-07 5.7E-12 83.9 5.9 106 114-226 106-214 (253)
143 2egg_A AROE, shikimate 5-dehyd 98.4 3.8E-07 1.3E-11 83.5 8.0 112 113-229 137-258 (297)
144 2duw_A Putative COA-binding pr 98.4 2.2E-07 7.5E-12 76.2 5.7 103 117-229 13-119 (145)
145 3dfu_A Uncharacterized protein 98.4 3.1E-07 1.1E-11 81.1 7.0 70 117-209 6-75 (232)
146 3ulk_A Ketol-acid reductoisome 98.4 4.7E-07 1.6E-11 86.3 7.9 96 113-212 33-134 (491)
147 2g1u_A Hypothetical protein TM 98.4 6.6E-07 2.3E-11 73.4 7.9 98 113-212 15-121 (155)
148 1a4i_A Methylenetetrahydrofola 98.4 9.8E-07 3.3E-11 80.5 9.4 135 112-283 160-296 (301)
149 3l07_A Bifunctional protein fo 98.4 7.2E-07 2.5E-11 80.8 8.4 80 112-212 156-236 (285)
150 3p2o_A Bifunctional protein fo 98.4 6.5E-07 2.2E-11 81.1 8.2 81 112-213 155-236 (285)
151 2c2x_A Methylenetetrahydrofola 98.4 1E-06 3.4E-11 79.7 9.3 114 112-269 153-269 (281)
152 1b0a_A Protein (fold bifunctio 98.4 5.5E-07 1.9E-11 81.7 7.4 127 112-280 154-281 (288)
153 3ngx_A Bifunctional protein fo 98.4 6.4E-07 2.2E-11 80.7 7.4 77 115-212 148-225 (276)
154 4a5o_A Bifunctional protein fo 98.3 8.7E-07 3E-11 80.3 7.8 81 112-213 156-237 (286)
155 3ghy_A Ketopantoate reductase 98.3 5.5E-07 1.9E-11 83.4 6.6 91 117-211 3-106 (335)
156 2qyt_A 2-dehydropantoate 2-red 98.3 2.2E-07 7.7E-12 84.6 3.6 105 118-226 9-133 (317)
157 3i83_A 2-dehydropantoate 2-red 98.3 3.1E-06 1.1E-10 77.8 11.1 107 118-229 3-124 (320)
158 4a26_A Putative C-1-tetrahydro 98.3 8.3E-07 2.8E-11 81.0 7.0 133 112-280 160-295 (300)
159 1x7d_A Ornithine cyclodeaminas 98.3 1.3E-06 4.4E-11 81.8 8.3 92 116-211 128-228 (350)
160 1edz_A 5,10-methylenetetrahydr 98.3 3.4E-07 1.2E-11 84.5 4.3 94 112-211 172-277 (320)
161 3ic5_A Putative saccharopine d 98.3 1.1E-06 3.7E-11 67.8 6.5 88 116-209 4-100 (118)
162 3hwr_A 2-dehydropantoate 2-red 98.3 1.2E-06 3.9E-11 80.7 7.4 105 115-224 17-134 (318)
163 3fwz_A Inner membrane protein 98.3 7.3E-07 2.5E-11 72.0 4.8 90 118-209 8-105 (140)
164 3hdj_A Probable ornithine cycl 98.2 4.5E-06 1.5E-10 76.9 9.7 89 116-212 120-216 (313)
165 1lss_A TRK system potassium up 98.2 4.3E-06 1.5E-10 66.3 8.2 90 117-208 4-102 (140)
166 3hn2_A 2-dehydropantoate 2-red 98.2 6E-06 2.1E-10 75.6 9.6 107 118-230 3-123 (312)
167 2hmt_A YUAA protein; RCK, KTN, 98.2 1.6E-06 5.3E-11 69.2 4.6 96 115-212 4-107 (144)
168 1p77_A Shikimate 5-dehydrogena 98.1 2.8E-06 9.7E-11 76.5 6.6 97 113-213 115-218 (272)
169 1vl6_A Malate oxidoreductase; 98.1 2.1E-05 7.1E-10 74.1 12.6 137 61-227 159-310 (388)
170 3o8q_A Shikimate 5-dehydrogena 98.1 2.4E-06 8E-11 77.6 5.5 96 112-211 121-223 (281)
171 2z2v_A Hypothetical protein PH 98.1 2.4E-06 8.3E-11 80.3 5.5 109 114-229 13-127 (365)
172 1omo_A Alanine dehydrogenase; 98.1 6.8E-06 2.3E-10 75.9 8.3 87 116-210 124-218 (322)
173 3llv_A Exopolyphosphatase-rela 98.1 5.7E-06 1.9E-10 66.4 6.9 89 116-206 5-101 (141)
174 1nyt_A Shikimate 5-dehydrogena 98.1 1.4E-05 4.8E-10 71.8 9.7 95 114-212 116-217 (271)
175 3uuw_A Putative oxidoreductase 98.0 1.3E-05 4.6E-10 72.9 9.1 108 117-229 6-119 (308)
176 3c7a_A Octopine dehydrogenase; 98.0 6.1E-06 2.1E-10 78.1 7.0 89 118-208 3-115 (404)
177 2ewd_A Lactate dehydrogenase,; 98.0 9.1E-06 3.1E-10 74.7 7.7 105 117-223 4-135 (317)
178 1tlt_A Putative oxidoreductase 98.0 3.8E-05 1.3E-09 70.2 11.8 107 118-229 6-118 (319)
179 3ado_A Lambda-crystallin; L-gu 98.0 7.4E-06 2.5E-10 75.6 6.7 107 116-224 5-136 (319)
180 3db2_A Putative NADPH-dependen 98.0 1.6E-05 5.6E-10 73.8 9.1 69 118-186 6-79 (354)
181 3e18_A Oxidoreductase; dehydro 98.0 1.1E-05 3.7E-10 75.3 7.7 68 118-185 6-77 (359)
182 3pwz_A Shikimate dehydrogenase 98.0 2.6E-05 8.8E-10 70.4 9.3 94 112-209 115-215 (272)
183 4hkt_A Inositol 2-dehydrogenas 97.9 1.9E-05 6.5E-10 72.6 8.2 106 118-229 4-116 (331)
184 3euw_A MYO-inositol dehydrogen 97.9 1.7E-05 5.8E-10 73.3 7.9 68 118-185 5-77 (344)
185 2qrj_A Saccharopine dehydrogen 97.9 5.1E-06 1.7E-10 78.6 4.2 83 116-209 213-300 (394)
186 1iuk_A Hypothetical protein TT 97.9 3.4E-05 1.2E-09 62.6 8.6 104 116-229 12-119 (140)
187 3q2i_A Dehydrogenase; rossmann 97.9 1.7E-05 5.9E-10 73.7 7.6 69 117-185 13-87 (354)
188 3jyo_A Quinate/shikimate dehyd 97.9 3.5E-05 1.2E-09 69.9 9.2 93 114-209 124-229 (283)
189 2ho3_A Oxidoreductase, GFO/IDH 97.9 2.7E-05 9.2E-10 71.4 8.1 105 119-228 3-114 (325)
190 3fbt_A Chorismate mutase and s 97.9 2.2E-05 7.5E-10 71.2 7.3 94 113-211 118-216 (282)
191 3vtf_A UDP-glucose 6-dehydroge 97.9 3E-05 1E-09 74.5 8.6 106 116-221 20-156 (444)
192 3cea_A MYO-inositol 2-dehydrog 97.9 3.6E-05 1.2E-09 71.0 8.9 107 118-229 9-125 (346)
193 3ego_A Probable 2-dehydropanto 97.9 1.5E-05 5.3E-10 72.8 6.3 105 118-228 3-117 (307)
194 3g17_A Similar to 2-dehydropan 97.9 2.5E-06 8.5E-11 77.5 0.8 96 118-215 3-102 (294)
195 2d59_A Hypothetical protein PH 97.9 6E-05 2E-09 61.4 9.0 101 117-229 22-126 (144)
196 3tnl_A Shikimate dehydrogenase 97.9 6.4E-05 2.2E-09 69.2 10.1 96 112-209 149-263 (315)
197 1hyh_A L-hicdh, L-2-hydroxyiso 97.9 4E-05 1.4E-09 70.0 8.7 67 118-185 2-81 (309)
198 3c1a_A Putative oxidoreductase 97.8 1.5E-05 5.1E-10 72.9 5.5 106 118-229 11-122 (315)
199 1f06_A MESO-diaminopimelate D- 97.8 5.9E-05 2E-09 69.4 9.5 102 118-227 4-110 (320)
200 1j5p_A Aspartate dehydrogenase 97.8 6E-05 2E-09 67.2 9.0 100 116-229 11-114 (253)
201 3rc1_A Sugar 3-ketoreductase; 97.8 3.4E-05 1.2E-09 71.7 7.8 71 115-185 25-101 (350)
202 3e9m_A Oxidoreductase, GFO/IDH 97.8 3E-05 1E-09 71.4 7.2 68 118-185 6-79 (330)
203 2glx_A 1,5-anhydro-D-fructose 97.8 3.7E-05 1.2E-09 70.5 7.5 106 119-229 2-115 (332)
204 3evn_A Oxidoreductase, GFO/IDH 97.8 5.4E-05 1.8E-09 69.6 8.6 68 118-185 6-79 (329)
205 1xea_A Oxidoreductase, GFO/IDH 97.8 5.9E-05 2E-09 69.1 8.4 107 118-229 3-116 (323)
206 1id1_A Putative potassium chan 97.8 3.4E-05 1.1E-09 62.9 6.0 90 117-208 3-104 (153)
207 3ezy_A Dehydrogenase; structur 97.8 4.9E-05 1.7E-09 70.3 7.8 68 118-185 3-76 (344)
208 1nvt_A Shikimate 5'-dehydrogen 97.8 5.8E-05 2E-09 68.3 7.9 94 114-211 125-232 (287)
209 1pzg_A LDH, lactate dehydrogen 97.7 5.8E-05 2E-09 69.9 8.0 100 117-216 9-139 (331)
210 2a9f_A Putative malic enzyme ( 97.7 0.00011 3.7E-09 69.4 9.8 137 61-227 155-305 (398)
211 1a5z_A L-lactate dehydrogenase 97.7 5.8E-05 2E-09 69.4 7.8 112 118-231 1-140 (319)
212 2p2s_A Putative oxidoreductase 97.7 0.00012 4.1E-09 67.3 9.6 107 118-229 5-119 (336)
213 3mz0_A Inositol 2-dehydrogenas 97.7 5.7E-05 2E-09 69.8 7.1 68 118-185 3-78 (344)
214 2hjr_A Malate dehydrogenase; m 97.7 0.00012 4.1E-09 67.7 9.2 112 118-231 15-155 (328)
215 3f4l_A Putative oxidoreductase 97.7 0.0001 3.5E-09 68.2 8.7 68 118-185 3-77 (345)
216 4b4u_A Bifunctional protein fo 97.7 8.8E-05 3E-09 67.5 7.8 80 111-211 173-253 (303)
217 3ec7_A Putative dehydrogenase; 97.7 8.1E-05 2.8E-09 69.4 7.8 70 116-185 22-99 (357)
218 3bio_A Oxidoreductase, GFO/IDH 97.7 6E-05 2.1E-09 68.9 6.7 101 118-227 10-117 (304)
219 1guz_A Malate dehydrogenase; o 97.7 0.00017 5.8E-09 66.0 9.6 65 118-183 1-79 (310)
220 3l4b_C TRKA K+ channel protien 97.7 5.2E-05 1.8E-09 65.4 5.8 91 118-210 1-100 (218)
221 4fcc_A Glutamate dehydrogenase 97.6 0.00032 1.1E-08 67.3 11.4 111 112-229 230-368 (450)
222 3e82_A Putative oxidoreductase 97.6 0.00015 5E-09 67.8 9.0 105 118-229 8-120 (364)
223 2ef0_A Ornithine carbamoyltran 97.6 0.0014 4.7E-08 59.9 15.1 130 57-209 117-261 (301)
224 2dvm_A Malic enzyme, 439AA lon 97.6 0.00012 4E-09 70.3 8.4 111 112-227 181-312 (439)
225 3two_A Mannitol dehydrogenase; 97.6 0.00011 3.6E-09 68.1 7.9 92 116-212 176-268 (348)
226 3qy9_A DHPR, dihydrodipicolina 97.6 0.00018 6.2E-09 63.8 9.0 83 118-213 4-87 (243)
227 3l9w_A Glutathione-regulated p 97.6 3.9E-05 1.3E-09 73.2 4.8 92 117-210 4-103 (413)
228 2i6u_A Otcase, ornithine carba 97.6 0.0018 6E-08 59.3 15.4 130 57-209 111-265 (307)
229 3t4e_A Quinate/shikimate dehyd 97.6 0.00013 4.6E-09 67.0 7.8 73 112-184 143-231 (312)
230 4fgw_A Glycerol-3-phosphate de 97.6 5.9E-05 2E-09 71.4 5.5 93 119-213 36-155 (391)
231 1npy_A Hypothetical shikimate 97.6 0.00019 6.6E-09 64.6 8.6 90 116-210 118-214 (271)
232 3ohs_X Trans-1,2-dihydrobenzen 97.6 0.00015 5E-09 66.8 7.9 68 118-185 3-78 (334)
233 1yqd_A Sinapyl alcohol dehydro 97.6 6.2E-05 2.1E-09 70.3 5.4 91 116-211 187-284 (366)
234 1ydw_A AX110P-like protein; st 97.6 0.00017 5.7E-09 67.1 8.3 107 118-229 7-124 (362)
235 3i23_A Oxidoreductase, GFO/IDH 97.6 0.00035 1.2E-08 64.7 10.4 67 118-185 3-77 (349)
236 2aef_A Calcium-gated potassium 97.5 9.8E-05 3.4E-09 64.3 5.9 89 116-208 8-105 (234)
237 4f2g_A Otcase 1, ornithine car 97.5 0.0013 4.4E-08 60.2 13.4 130 57-209 117-264 (309)
238 1dxh_A Ornithine carbamoyltran 97.5 0.00099 3.4E-08 61.6 12.7 131 57-209 117-274 (335)
239 2d8a_A PH0655, probable L-thre 97.5 0.00017 5.7E-09 66.7 7.6 90 116-210 167-268 (348)
240 1pg5_A Aspartate carbamoyltran 97.5 0.0017 5.8E-08 59.2 13.9 130 57-209 111-260 (299)
241 2v6b_A L-LDH, L-lactate dehydr 97.5 0.00015 5.2E-09 66.2 6.9 112 118-231 1-138 (304)
242 1pvv_A Otcase, ornithine carba 97.5 0.0035 1.2E-07 57.5 15.7 130 57-209 118-271 (315)
243 3fef_A Putative glucosidase LP 97.5 0.00012 4.2E-09 70.5 5.9 106 116-222 4-159 (450)
244 4ep1_A Otcase, ornithine carba 97.5 0.0025 8.4E-08 59.0 14.3 130 57-209 142-294 (340)
245 1t2d_A LDH-P, L-lactate dehydr 97.4 0.0005 1.7E-08 63.3 9.8 96 118-214 5-131 (322)
246 3abi_A Putative uncharacterize 97.4 0.00016 5.5E-09 67.5 6.5 87 116-209 15-108 (365)
247 3kux_A Putative oxidoreductase 97.4 0.00027 9.3E-09 65.5 8.0 67 118-185 8-79 (352)
248 1uuf_A YAHK, zinc-type alcohol 97.4 0.00014 4.6E-09 68.1 5.9 91 116-211 194-290 (369)
249 3fhl_A Putative oxidoreductase 97.4 0.00027 9.1E-09 65.8 7.8 66 118-185 6-77 (362)
250 3zwc_A Peroxisomal bifunctiona 97.4 0.00032 1.1E-08 71.6 8.9 116 117-236 316-453 (742)
251 1cdo_A Alcohol dehydrogenase; 97.4 0.00036 1.2E-08 65.1 8.6 90 116-210 192-295 (374)
252 4a8t_A Putrescine carbamoyltra 97.4 0.0022 7.4E-08 59.4 13.6 132 57-209 135-292 (339)
253 3gdo_A Uncharacterized oxidore 97.4 0.00033 1.1E-08 65.1 8.3 66 118-185 6-77 (358)
254 1h6d_A Precursor form of gluco 97.4 0.00025 8.5E-09 67.9 7.5 108 117-229 83-203 (433)
255 1p0f_A NADP-dependent alcohol 97.4 0.00034 1.2E-08 65.2 8.2 90 116-210 191-294 (373)
256 2i6t_A Ubiquitin-conjugating e 97.4 0.00019 6.4E-09 65.7 6.3 113 117-231 14-149 (303)
257 3r7f_A Aspartate carbamoyltran 97.4 0.0014 4.7E-08 59.9 12.0 127 57-209 109-250 (304)
258 1piw_A Hypothetical zinc-type 97.4 0.00014 4.7E-09 67.6 5.4 93 116-211 179-278 (360)
259 2jhf_A Alcohol dehydrogenase E 97.4 0.00037 1.3E-08 65.0 8.3 90 116-210 191-294 (374)
260 1e3i_A Alcohol dehydrogenase, 97.4 0.00046 1.6E-08 64.4 8.9 90 116-210 195-298 (376)
261 1duv_G Octase-1, ornithine tra 97.4 0.001 3.5E-08 61.5 11.0 132 57-209 116-274 (333)
262 4a8p_A Putrescine carbamoyltra 97.4 0.0028 9.6E-08 59.0 13.8 132 57-209 113-270 (355)
263 1lld_A L-lactate dehydrogenase 97.4 0.00033 1.1E-08 63.9 7.4 97 116-214 6-129 (319)
264 3m2t_A Probable dehydrogenase; 97.4 0.00011 3.9E-09 68.4 4.3 68 117-184 5-79 (359)
265 1vlv_A Otcase, ornithine carba 97.4 0.0032 1.1E-07 58.0 13.8 130 57-209 130-285 (325)
266 2fzw_A Alcohol dehydrogenase c 97.4 0.00042 1.4E-08 64.5 8.1 90 116-210 190-293 (373)
267 1oth_A Protein (ornithine tran 97.3 0.0052 1.8E-07 56.5 15.0 130 57-209 118-271 (321)
268 1rjw_A ADH-HT, alcohol dehydro 97.3 0.00022 7.5E-09 65.7 5.8 91 116-211 164-263 (339)
269 4fb5_A Probable oxidoreductase 97.3 0.0004 1.4E-08 64.5 7.6 71 115-185 23-106 (393)
270 3o9z_A Lipopolysaccaride biosy 97.3 0.00053 1.8E-08 62.7 8.2 67 118-184 4-83 (312)
271 3tpf_A Otcase, ornithine carba 97.3 0.0029 1E-07 57.8 13.0 130 57-209 108-262 (307)
272 3dfz_A SIRC, precorrin-2 dehyd 97.3 0.00077 2.6E-08 58.9 8.7 92 112-209 26-121 (223)
273 2ixa_A Alpha-N-acetylgalactosa 97.3 0.00062 2.1E-08 65.2 8.9 68 117-184 20-102 (444)
274 3e8x_A Putative NAD-dependent 97.3 0.00038 1.3E-08 60.2 6.8 73 112-184 16-95 (236)
275 3tum_A Shikimate dehydrogenase 97.3 0.00048 1.6E-08 61.9 7.6 97 112-208 120-224 (269)
276 3uko_A Alcohol dehydrogenase c 97.3 0.00042 1.4E-08 64.8 7.5 89 116-209 193-295 (378)
277 2cdc_A Glucose dehydrogenase g 97.3 0.00016 5.5E-09 67.3 4.6 93 114-210 178-279 (366)
278 1e3j_A NADP(H)-dependent ketos 97.3 0.00054 1.9E-08 63.3 7.9 91 116-211 168-273 (352)
279 3oa2_A WBPB; oxidoreductase, s 97.3 0.00057 2E-08 62.6 7.9 67 118-184 4-84 (318)
280 2axq_A Saccharopine dehydrogen 97.3 0.00019 6.4E-09 69.6 4.8 74 111-184 17-99 (467)
281 3gd5_A Otcase, ornithine carba 97.3 0.0039 1.3E-07 57.3 13.1 130 57-209 120-273 (323)
282 2vt3_A REX, redox-sensing tran 97.2 0.00022 7.6E-09 62.0 4.5 67 117-183 85-155 (215)
283 4had_A Probable oxidoreductase 97.2 0.00031 1.1E-08 64.8 5.8 67 118-184 24-97 (350)
284 2cf5_A Atccad5, CAD, cinnamyl 97.2 0.00023 7.7E-09 66.1 4.6 90 116-210 180-276 (357)
285 1zh8_A Oxidoreductase; TM0312, 97.2 0.00054 1.8E-08 63.2 7.1 67 118-184 19-93 (340)
286 1pl8_A Human sorbitol dehydrog 97.2 0.00049 1.7E-08 63.8 6.8 91 116-211 171-275 (356)
287 2nu8_A Succinyl-COA ligase [AD 97.2 0.0005 1.7E-08 62.4 6.7 105 117-229 7-117 (288)
288 4amu_A Ornithine carbamoyltran 97.2 0.004 1.4E-07 58.2 12.9 130 57-209 143-300 (365)
289 1ldn_A L-lactate dehydrogenase 97.2 0.00031 1.1E-08 64.5 5.4 93 117-210 6-124 (316)
290 1iz0_A Quinone oxidoreductase; 97.2 0.00024 8.2E-09 64.2 4.5 88 116-210 125-219 (302)
291 3d6n_B Aspartate carbamoyltran 97.2 0.0037 1.3E-07 56.7 12.3 152 2-182 55-213 (291)
292 2nvw_A Galactose/lactose metab 97.2 0.00054 1.8E-08 66.5 7.1 69 116-184 38-119 (479)
293 1ff9_A Saccharopine reductase; 97.2 0.00035 1.2E-08 67.3 5.7 69 116-184 2-79 (450)
294 3s2e_A Zinc-containing alcohol 97.2 0.00027 9.1E-09 65.0 4.6 90 116-210 166-264 (340)
295 3dty_A Oxidoreductase, GFO/IDH 97.2 0.00062 2.1E-08 64.2 7.1 70 116-185 11-97 (398)
296 1y6j_A L-lactate dehydrogenase 97.2 0.0013 4.4E-08 60.4 9.0 114 117-231 7-147 (318)
297 3aog_A Glutamate dehydrogenase 97.2 0.0038 1.3E-07 59.7 12.4 109 112-229 230-358 (440)
298 3v5n_A Oxidoreductase; structu 97.1 0.00093 3.2E-08 63.5 8.0 69 117-185 37-122 (417)
299 1ur5_A Malate dehydrogenase; o 97.1 0.00086 2.9E-08 61.3 7.4 92 118-211 3-121 (309)
300 4gmf_A Yersiniabactin biosynth 97.1 0.00047 1.6E-08 64.8 5.8 67 117-184 7-77 (372)
301 3nv9_A Malic enzyme; rossmann 97.1 0.0038 1.3E-07 59.8 12.0 140 61-228 186-344 (487)
302 4a7p_A UDP-glucose dehydrogena 97.1 0.0014 4.6E-08 63.2 9.0 94 113-211 318-423 (446)
303 3uog_A Alcohol dehydrogenase; 97.1 0.00033 1.1E-08 65.2 4.6 89 116-210 189-288 (363)
304 3ip1_A Alcohol dehydrogenase, 97.1 0.00069 2.4E-08 63.9 6.8 92 115-210 212-319 (404)
305 3qvo_A NMRA family protein; st 97.1 0.00031 1.1E-08 61.0 4.0 97 115-213 21-128 (236)
306 2tmg_A Protein (glutamate dehy 97.1 0.0073 2.5E-07 57.4 13.7 109 112-229 204-333 (415)
307 2hcy_A Alcohol dehydrogenase 1 97.1 0.00058 2E-08 63.0 6.0 91 116-211 169-271 (347)
308 1oju_A MDH, malate dehydrogena 97.1 0.0013 4.4E-08 59.9 8.2 92 118-210 1-119 (294)
309 2w37_A Ornithine carbamoyltran 97.1 0.0057 1.9E-07 57.0 12.6 131 57-210 139-296 (359)
310 4ej6_A Putative zinc-binding d 97.1 0.00037 1.3E-08 65.1 4.7 90 116-210 182-285 (370)
311 3goh_A Alcohol dehydrogenase, 97.1 0.00061 2.1E-08 61.9 5.9 87 116-209 142-229 (315)
312 1obb_A Maltase, alpha-glucosid 97.1 0.00052 1.8E-08 66.6 5.7 115 117-232 3-174 (480)
313 3moi_A Probable dehydrogenase; 97.1 0.0003 1E-08 66.1 3.9 67 118-184 3-75 (387)
314 3pqe_A L-LDH, L-lactate dehydr 97.1 0.00084 2.9E-08 62.0 6.6 96 117-212 5-125 (326)
315 1jw9_B Molybdopterin biosynthe 97.1 0.00027 9.2E-09 62.7 3.2 92 113-208 27-152 (249)
316 3sds_A Ornithine carbamoyltran 97.0 0.0094 3.2E-07 55.5 13.6 142 57-209 138-308 (353)
317 2h6e_A ADH-4, D-arabinose 1-de 97.0 0.0003 1E-08 64.8 3.6 90 116-210 170-270 (344)
318 3btv_A Galactose/lactose metab 97.0 0.00048 1.7E-08 65.9 5.0 67 118-184 21-100 (438)
319 4gqa_A NAD binding oxidoreduct 97.0 0.00048 1.6E-08 65.1 4.8 68 118-185 27-108 (412)
320 1ml4_A Aspartate transcarbamoy 97.0 0.0017 5.7E-08 59.5 8.2 130 57-209 117-268 (308)
321 3gvi_A Malate dehydrogenase; N 97.0 0.0028 9.6E-08 58.4 9.8 104 115-219 5-134 (324)
322 3nep_X Malate dehydrogenase; h 97.0 0.0022 7.5E-08 58.8 8.9 95 118-212 1-121 (314)
323 3fpc_A NADP-dependent alcohol 97.0 0.0005 1.7E-08 63.6 4.6 89 116-209 166-266 (352)
324 3p7m_A Malate dehydrogenase; p 97.0 0.0021 7.1E-08 59.2 8.5 95 116-211 4-124 (321)
325 3grf_A Ornithine carbamoyltran 97.0 0.0095 3.2E-07 54.9 12.8 137 57-209 117-283 (328)
326 3k92_A NAD-GDH, NAD-specific g 97.0 0.0077 2.6E-07 57.3 12.4 109 112-229 216-343 (424)
327 3d0o_A L-LDH 1, L-lactate dehy 97.0 0.0016 5.3E-08 59.8 7.4 116 116-231 5-147 (317)
328 1f8f_A Benzyl alcohol dehydrog 96.9 0.00044 1.5E-08 64.4 3.7 90 116-210 190-290 (371)
329 2dt5_A AT-rich DNA-binding pro 96.9 0.00064 2.2E-08 58.9 4.4 67 117-184 80-151 (211)
330 1v9l_A Glutamate dehydrogenase 96.9 0.0083 2.8E-07 57.1 12.4 110 112-229 205-339 (421)
331 1pqw_A Polyketide synthase; ro 96.9 0.00032 1.1E-08 59.2 2.4 89 116-210 38-138 (198)
332 2bma_A Glutamate dehydrogenase 96.9 0.0077 2.6E-07 58.0 12.0 110 112-229 247-386 (470)
333 3aoe_E Glutamate dehydrogenase 96.9 0.012 4.2E-07 55.9 13.4 109 112-229 213-337 (419)
334 3qwb_A Probable quinone oxidor 96.9 0.0013 4.3E-08 60.3 6.3 89 116-210 148-248 (334)
335 4eye_A Probable oxidoreductase 96.9 0.00078 2.7E-08 62.1 4.9 88 116-209 159-257 (342)
336 3vku_A L-LDH, L-lactate dehydr 96.9 0.0023 7.9E-08 59.0 7.9 97 115-211 7-127 (326)
337 1oi7_A Succinyl-COA synthetase 96.9 0.0012 4.2E-08 59.8 6.0 105 117-229 7-117 (288)
338 2czc_A Glyceraldehyde-3-phosph 96.9 0.0019 6.6E-08 59.6 7.4 68 118-185 3-91 (334)
339 3gms_A Putative NADPH:quinone 96.9 0.00067 2.3E-08 62.4 4.3 89 116-210 144-244 (340)
340 1lc0_A Biliverdin reductase A; 96.9 0.002 6.8E-08 58.3 7.3 102 118-229 8-118 (294)
341 1u8x_X Maltose-6'-phosphate gl 96.9 0.001 3.4E-08 64.5 5.6 115 117-231 28-193 (472)
342 3csu_A Protein (aspartate carb 96.9 0.003 1E-07 57.8 8.4 96 114-209 151-267 (310)
343 4ekn_B Aspartate carbamoyltran 96.9 0.024 8.2E-07 51.7 14.4 128 57-209 113-263 (306)
344 1nvm_B Acetaldehyde dehydrogen 96.9 0.001 3.4E-08 61.1 5.2 65 118-182 5-80 (312)
345 4h3v_A Oxidoreductase domain p 96.8 0.00069 2.4E-08 62.8 4.2 68 118-185 7-87 (390)
346 3mw9_A GDH 1, glutamate dehydr 96.8 0.007 2.4E-07 58.6 11.2 107 114-229 241-366 (501)
347 1vj0_A Alcohol dehydrogenase, 96.8 0.0008 2.7E-08 63.0 4.6 90 116-210 195-299 (380)
348 3u3x_A Oxidoreductase; structu 96.8 0.0011 3.9E-08 61.6 5.6 68 117-184 26-99 (361)
349 2dq4_A L-threonine 3-dehydroge 96.8 0.00056 1.9E-08 63.0 3.4 89 116-210 164-263 (343)
350 3r6d_A NAD-dependent epimerase 96.8 0.00061 2.1E-08 58.2 3.3 91 118-212 6-110 (221)
351 2b5w_A Glucose dehydrogenase; 96.8 0.002 6.8E-08 59.6 6.9 91 115-210 171-274 (357)
352 2zqz_A L-LDH, L-lactate dehydr 96.8 0.002 6.9E-08 59.3 6.8 116 116-231 8-149 (326)
353 1b7g_O Protein (glyceraldehyde 96.8 0.0024 8.2E-08 59.2 7.3 66 119-184 3-88 (340)
354 3r3j_A Glutamate dehydrogenase 96.8 0.0096 3.3E-07 57.1 11.6 110 112-229 234-373 (456)
355 2nqt_A N-acetyl-gamma-glutamyl 96.8 0.0027 9.2E-08 59.2 7.6 94 117-218 9-119 (352)
356 3eag_A UDP-N-acetylmuramate:L- 96.8 0.0031 1.1E-07 57.9 7.9 111 117-227 4-134 (326)
357 3q2o_A Phosphoribosylaminoimid 96.8 0.001 3.6E-08 62.3 4.8 67 114-180 11-82 (389)
358 1v3u_A Leukotriene B4 12- hydr 96.8 0.00067 2.3E-08 62.1 3.4 89 116-210 145-245 (333)
359 3h2s_A Putative NADH-flavin re 96.8 0.0031 1.1E-07 53.5 7.4 94 118-211 1-106 (224)
360 3gg2_A Sugar dehydrogenase, UD 96.8 0.0046 1.6E-07 59.5 9.4 94 113-211 314-420 (450)
361 2yfq_A Padgh, NAD-GDH, NAD-spe 96.8 0.0039 1.3E-07 59.4 8.7 109 112-229 207-340 (421)
362 1ez4_A Lactate dehydrogenase; 96.8 0.0026 8.8E-08 58.4 7.2 114 118-231 6-145 (318)
363 4ew6_A D-galactose-1-dehydroge 96.8 0.0014 4.6E-08 60.4 5.3 63 116-184 24-92 (330)
364 3ew7_A LMO0794 protein; Q8Y8U8 96.8 0.0035 1.2E-07 52.9 7.6 93 118-211 1-104 (221)
365 1lnq_A MTHK channels, potassiu 96.8 0.0013 4.6E-08 60.3 5.3 87 117-207 115-209 (336)
366 3jv7_A ADH-A; dehydrogenase, n 96.7 0.0018 6E-08 59.6 6.0 90 116-210 171-271 (345)
367 2we8_A Xanthine dehydrogenase; 96.7 0.0053 1.8E-07 57.9 9.1 90 117-229 204-299 (386)
368 4h31_A Otcase, ornithine carba 96.7 0.011 3.8E-07 55.1 11.2 180 2-209 91-300 (358)
369 3ip3_A Oxidoreductase, putativ 96.7 0.0017 5.7E-08 59.7 5.6 66 118-184 3-78 (337)
370 3oqb_A Oxidoreductase; structu 96.7 0.0041 1.4E-07 58.0 8.3 67 118-184 7-94 (383)
371 3do5_A HOM, homoserine dehydro 96.7 0.0024 8.1E-08 59.0 6.5 111 118-229 3-136 (327)
372 3keo_A Redox-sensing transcrip 96.7 0.0011 3.7E-08 57.5 3.9 68 117-184 84-159 (212)
373 3jyn_A Quinone oxidoreductase; 96.7 0.001 3.4E-08 60.8 3.9 89 116-210 140-240 (325)
374 3lk7_A UDP-N-acetylmuramoylala 96.7 0.0018 6E-08 62.2 5.6 115 114-228 6-139 (451)
375 3ldh_A Lactate dehydrogenase; 96.6 0.0013 4.6E-08 60.7 4.4 95 116-211 20-140 (330)
376 1hdo_A Biliverdin IX beta redu 96.6 0.0015 5E-08 54.6 4.4 68 117-184 3-78 (206)
377 2c0c_A Zinc binding alcohol de 96.6 0.00084 2.9E-08 62.4 3.1 90 116-211 163-263 (362)
378 1lu9_A Methylene tetrahydromet 96.6 0.0012 4.1E-08 59.4 4.0 38 113-150 115-153 (287)
379 3ius_A Uncharacterized conserv 96.6 0.0026 9E-08 56.2 6.1 66 117-184 5-74 (286)
380 1xyg_A Putative N-acetyl-gamma 96.6 0.0093 3.2E-07 55.6 10.1 90 116-212 15-115 (359)
381 4b7c_A Probable oxidoreductase 96.6 0.00075 2.6E-08 61.8 2.6 90 116-211 149-250 (336)
382 4dup_A Quinone oxidoreductase; 96.6 0.00095 3.2E-08 61.8 3.3 89 116-210 167-266 (353)
383 1js1_X Transcarbamylase; alpha 96.6 0.024 8E-07 52.1 12.5 130 57-209 130-275 (324)
384 4a0s_A Octenoyl-COA reductase/ 96.6 0.0017 6E-08 61.9 5.2 89 116-210 220-337 (447)
385 2dph_A Formaldehyde dismutase; 96.6 0.00094 3.2E-08 62.8 3.2 95 116-211 185-301 (398)
386 1mld_A Malate dehydrogenase; o 96.6 0.0071 2.4E-07 55.3 8.8 98 118-218 1-124 (314)
387 3fbg_A Putative arginate lyase 96.6 0.0011 3.6E-08 61.2 3.2 89 116-209 150-248 (346)
388 3m6i_A L-arabinitol 4-dehydrog 96.6 0.0028 9.7E-08 58.6 6.1 91 116-211 179-285 (363)
389 2j3h_A NADP-dependent oxidored 96.6 0.001 3.4E-08 61.1 3.0 89 116-210 155-256 (345)
390 2fp4_A Succinyl-COA ligase [GD 96.5 0.0074 2.5E-07 55.1 8.5 108 114-229 10-125 (305)
391 2q3e_A UDP-glucose 6-dehydroge 96.5 0.0095 3.2E-07 57.4 9.7 96 114-212 326-445 (467)
392 2xxj_A L-LDH, L-lactate dehydr 96.5 0.0028 9.4E-08 58.0 5.6 114 118-231 1-140 (310)
393 3tqh_A Quinone oxidoreductase; 96.5 0.0013 4.5E-08 59.9 3.4 88 116-210 152-246 (321)
394 3ijp_A DHPR, dihydrodipicolina 96.5 0.0038 1.3E-07 56.6 6.3 90 118-212 22-122 (288)
395 2vn8_A Reticulon-4-interacting 96.5 0.0066 2.3E-07 56.5 8.1 92 116-212 183-283 (375)
396 1zq6_A Otcase, ornithine carba 96.5 0.051 1.8E-06 50.5 13.8 129 57-209 152-315 (359)
397 2ozp_A N-acetyl-gamma-glutamyl 96.5 0.013 4.5E-07 54.3 10.0 88 118-211 5-101 (345)
398 4dvj_A Putative zinc-dependent 96.4 0.0026 8.8E-08 59.1 5.1 89 116-209 171-270 (363)
399 4ina_A Saccharopine dehydrogen 96.4 0.0016 5.6E-08 61.7 3.7 66 118-183 2-86 (405)
400 2eih_A Alcohol dehydrogenase; 96.4 0.0024 8.3E-08 58.7 4.8 89 116-210 166-266 (343)
401 3upl_A Oxidoreductase; rossman 96.4 0.0039 1.3E-07 59.8 6.4 108 118-229 24-160 (446)
402 1cf2_P Protein (glyceraldehyde 96.4 0.0031 1.1E-07 58.4 5.5 66 119-184 3-89 (337)
403 1kol_A Formaldehyde dehydrogen 96.4 0.0024 8.3E-08 59.9 4.8 95 116-210 185-301 (398)
404 1jvb_A NAD(H)-dependent alcoho 96.4 0.0012 4.1E-08 60.9 2.6 90 116-210 170-272 (347)
405 3orq_A N5-carboxyaminoimidazol 96.4 0.0034 1.2E-07 58.7 5.7 66 114-179 9-79 (377)
406 2bka_A CC3, TAT-interacting pr 96.4 0.004 1.4E-07 53.6 5.7 70 115-184 16-95 (242)
407 3pi7_A NADH oxidoreductase; gr 96.4 0.0036 1.2E-07 57.6 5.7 88 117-210 165-264 (349)
408 3tl2_A Malate dehydrogenase; c 96.4 0.008 2.8E-07 55.1 7.9 95 116-211 7-129 (315)
409 1tt7_A YHFP; alcohol dehydroge 96.4 0.003 1E-07 57.6 4.9 86 119-210 153-248 (330)
410 1s6y_A 6-phospho-beta-glucosid 96.4 0.0047 1.6E-07 59.4 6.5 114 117-230 7-173 (450)
411 1kyq_A Met8P, siroheme biosynt 96.4 0.0026 8.8E-08 57.3 4.3 38 113-150 9-46 (274)
412 2rir_A Dipicolinate synthase, 96.4 0.009 3.1E-07 54.0 8.0 107 115-229 5-121 (300)
413 2y0c_A BCEC, UDP-glucose dehyd 96.3 0.015 5.2E-07 56.2 10.0 91 114-208 325-438 (478)
414 1qor_A Quinone oxidoreductase; 96.3 0.0018 6.2E-08 59.0 3.3 89 116-210 140-240 (327)
415 1smk_A Malate dehydrogenase, g 96.3 0.0068 2.3E-07 55.7 7.2 66 117-183 8-86 (326)
416 1zud_1 Adenylyltransferase THI 96.3 0.0032 1.1E-07 55.7 4.8 93 113-209 24-150 (251)
417 1xa0_A Putative NADPH dependen 96.3 0.0022 7.7E-08 58.4 3.9 86 119-210 152-247 (328)
418 3krt_A Crotonyl COA reductase; 96.3 0.0013 4.5E-08 63.0 2.4 89 116-210 228-345 (456)
419 3ff4_A Uncharacterized protein 96.3 0.0077 2.6E-07 47.5 6.4 99 118-229 5-107 (122)
420 1ys4_A Aspartate-semialdehyde 96.3 0.0053 1.8E-07 57.1 6.3 88 118-210 9-115 (354)
421 3gqv_A Enoyl reductase; medium 96.3 0.0082 2.8E-07 55.8 7.6 89 115-209 163-263 (371)
422 4a2c_A Galactitol-1-phosphate 96.3 0.0058 2E-07 55.9 6.4 91 115-210 159-261 (346)
423 4f3y_A DHPR, dihydrodipicolina 96.3 0.0037 1.3E-07 56.2 4.9 91 117-212 7-107 (272)
424 2d4a_B Malate dehydrogenase; a 96.3 0.0047 1.6E-07 56.4 5.7 90 119-210 1-117 (308)
425 3gaz_A Alcohol dehydrogenase s 96.3 0.0021 7.2E-08 59.2 3.3 89 116-211 150-248 (343)
426 2zcu_A Uncharacterized oxidore 96.3 0.0029 9.9E-08 55.8 4.1 94 119-212 1-106 (286)
427 1y1p_A ARII, aldehyde reductas 96.3 0.0051 1.8E-07 55.5 5.8 70 114-183 8-93 (342)
428 1gu7_A Enoyl-[acyl-carrier-pro 96.2 0.0067 2.3E-07 56.0 6.6 89 116-210 166-276 (364)
429 2j8z_A Quinone oxidoreductase; 96.2 0.0025 8.6E-08 58.9 3.7 89 116-210 162-262 (354)
430 3nx4_A Putative oxidoreductase 96.2 0.0025 8.5E-08 57.9 3.4 87 117-210 148-242 (324)
431 3g79_A NDP-N-acetyl-D-galactos 96.2 0.012 4.2E-07 56.9 8.5 92 113-212 349-452 (478)
432 3k31_A Enoyl-(acyl-carrier-pro 96.2 0.0051 1.7E-07 55.4 5.4 40 112-151 25-67 (296)
433 3on5_A BH1974 protein; structu 96.2 0.0087 3E-07 55.9 7.1 86 118-226 200-287 (362)
434 1bgv_A Glutamate dehydrogenase 96.2 0.033 1.1E-06 53.4 11.2 110 112-229 225-365 (449)
435 3fi9_A Malate dehydrogenase; s 96.2 0.0042 1.4E-07 57.7 4.9 68 115-182 6-85 (343)
436 4g65_A TRK system potassium up 96.2 0.0033 1.1E-07 60.6 4.3 68 117-184 3-79 (461)
437 1wly_A CAAR, 2-haloacrylate re 96.2 0.0031 1.1E-07 57.6 3.9 88 116-209 145-244 (333)
438 2yyy_A Glyceraldehyde-3-phosph 96.2 0.0081 2.8E-07 55.7 6.7 87 118-209 3-113 (343)
439 3ojo_A CAP5O; rossmann fold, c 96.1 0.017 5.8E-07 55.2 8.9 84 114-208 312-406 (431)
440 4aj2_A L-lactate dehydrogenase 96.1 0.011 3.9E-07 54.4 7.5 98 114-212 16-139 (331)
441 1yb5_A Quinone oxidoreductase; 96.1 0.0025 8.4E-08 59.0 2.8 88 116-209 170-269 (351)
442 1zsy_A Mitochondrial 2-enoyl t 96.1 0.012 4E-07 54.4 7.5 88 116-209 167-270 (357)
443 3gpi_A NAD-dependent epimerase 96.1 0.0038 1.3E-07 55.3 4.0 67 116-182 2-72 (286)
444 2yv1_A Succinyl-COA ligase [AD 96.1 0.005 1.7E-07 55.9 4.8 104 118-229 14-123 (294)
445 3mtj_A Homoserine dehydrogenas 96.1 0.006 2.1E-07 58.5 5.5 107 118-229 11-131 (444)
446 1qyc_A Phenylcoumaran benzylic 96.1 0.014 4.9E-07 51.9 7.8 66 117-182 4-86 (308)
447 3c8m_A Homoserine dehydrogenas 96.1 0.0063 2.1E-07 56.1 5.5 111 118-229 7-142 (331)
448 1dih_A Dihydrodipicolinate red 96.1 0.0033 1.1E-07 56.5 3.5 65 118-182 6-81 (273)
449 1pjq_A CYSG, siroheme synthase 96.1 0.0054 1.9E-07 59.0 5.1 90 113-208 8-102 (457)
450 1h2b_A Alcohol dehydrogenase; 96.0 0.0034 1.2E-07 58.2 3.5 87 116-209 186-285 (359)
451 2yfk_A Aspartate/ornithine car 96.0 0.029 9.8E-07 53.3 9.8 67 115-181 186-271 (418)
452 3dqp_A Oxidoreductase YLBE; al 96.0 0.0042 1.4E-07 52.8 3.8 67 118-184 1-74 (219)
453 2ph5_A Homospermidine synthase 96.0 0.011 3.8E-07 57.0 7.0 34 118-151 14-51 (480)
454 3i6i_A Putative leucoanthocyan 96.0 0.0095 3.2E-07 54.4 6.2 68 115-182 8-92 (346)
455 2o3j_A UDP-glucose 6-dehydroge 96.0 0.025 8.5E-07 54.7 9.3 102 114-219 332-455 (481)
456 1xgk_A Nitrogen metabolite rep 95.9 0.0051 1.8E-07 56.8 4.2 97 116-212 4-115 (352)
457 2gas_A Isoflavone reductase; N 95.9 0.012 4.3E-07 52.2 6.7 67 117-183 2-86 (307)
458 4fs3_A Enoyl-[acyl-carrier-pro 95.9 0.014 4.8E-07 51.4 6.8 39 113-151 2-43 (256)
459 3rui_A Ubiquitin-like modifier 95.9 0.011 3.8E-07 54.7 6.2 63 73-149 4-67 (340)
460 2r6j_A Eugenol synthase 1; phe 95.9 0.02 6.8E-07 51.4 7.7 65 118-182 12-88 (318)
461 2pzm_A Putative nucleotide sug 95.8 0.0062 2.1E-07 55.2 4.3 72 112-183 15-98 (330)
462 1vkn_A N-acetyl-gamma-glutamyl 95.8 0.033 1.1E-06 51.8 9.2 93 116-216 12-114 (351)
463 2zb4_A Prostaglandin reductase 95.8 0.0045 1.5E-07 57.1 3.2 89 116-210 158-261 (357)
464 3dhn_A NAD-dependent epimerase 95.8 0.0061 2.1E-07 51.9 3.8 66 118-184 5-78 (227)
465 2ejw_A HDH, homoserine dehydro 95.8 0.0058 2E-07 56.4 3.9 102 118-226 4-116 (332)
466 3cps_A Glyceraldehyde 3-phosph 95.8 0.018 6.2E-07 53.6 7.2 30 118-147 18-48 (354)
467 1u8f_O GAPDH, glyceraldehyde-3 95.8 0.018 6.2E-07 53.2 7.2 89 118-211 4-124 (335)
468 2jl1_A Triphenylmethane reduct 95.8 0.0087 3E-07 52.7 4.9 96 118-213 1-110 (287)
469 4e4t_A Phosphoribosylaminoimid 95.7 0.0097 3.3E-07 56.5 5.2 66 114-179 32-102 (419)
470 3e48_A Putative nucleoside-dip 95.7 0.0074 2.5E-07 53.4 4.0 66 118-183 1-75 (289)
471 3ijr_A Oxidoreductase, short c 95.7 0.017 5.8E-07 51.7 6.4 38 113-150 43-81 (291)
472 2x5o_A UDP-N-acetylmuramoylala 95.7 0.025 8.6E-07 53.9 7.9 113 114-227 2-130 (439)
473 2x4g_A Nucleoside-diphosphate- 95.7 0.018 6.1E-07 52.0 6.6 65 118-182 14-86 (342)
474 2yv2_A Succinyl-COA synthetase 95.6 0.012 4.2E-07 53.4 5.4 104 118-229 14-124 (297)
475 2wm3_A NMRA-like family domain 95.6 0.015 5.1E-07 51.8 5.8 66 117-182 5-81 (299)
476 3kzn_A Aotcase, N-acetylornith 95.6 0.23 7.7E-06 46.2 14.0 104 57-182 152-274 (359)
477 4fn4_A Short chain dehydrogena 95.6 0.011 3.6E-07 52.6 4.6 37 114-150 4-41 (254)
478 3ruf_A WBGU; rossmann fold, UD 95.6 0.016 5.5E-07 52.7 6.0 70 114-183 22-110 (351)
479 1ebf_A Homoserine dehydrogenas 95.6 0.012 4.1E-07 54.9 5.1 86 118-210 5-116 (358)
480 4id9_A Short-chain dehydrogena 95.6 0.012 4E-07 53.5 4.9 72 112-183 14-87 (347)
481 3q98_A Transcarbamylase; rossm 95.6 0.062 2.1E-06 50.7 10.0 68 114-181 188-274 (399)
482 2dkn_A 3-alpha-hydroxysteroid 95.5 0.0066 2.2E-07 52.4 3.0 66 118-183 2-72 (255)
483 3dr3_A N-acetyl-gamma-glutamyl 95.5 0.014 4.7E-07 54.0 5.3 88 118-211 5-108 (337)
484 3hn7_A UDP-N-acetylmuramate-L- 95.5 0.025 8.6E-07 55.3 7.4 113 115-227 17-148 (524)
485 1o6z_A MDH, malate dehydrogena 95.5 0.019 6.4E-07 52.1 6.0 114 118-231 1-143 (303)
486 2ep5_A 350AA long hypothetical 95.4 0.018 6E-07 53.5 5.7 87 118-210 5-109 (350)
487 1b8p_A Protein (malate dehydro 95.4 0.025 8.5E-07 51.9 6.7 93 118-210 6-134 (329)
488 2c5a_A GDP-mannose-3', 5'-epim 95.4 0.018 6E-07 53.3 5.7 68 115-182 27-102 (379)
489 1p9l_A Dihydrodipicolinate red 95.4 0.031 1E-06 49.4 6.9 87 118-224 1-92 (245)
490 4eez_A Alcohol dehydrogenase 1 95.4 0.015 5.2E-07 53.1 5.1 90 116-210 163-264 (348)
491 3m2p_A UDP-N-acetylglucosamine 95.4 0.018 6.2E-07 51.5 5.5 65 117-183 2-72 (311)
492 3c1o_A Eugenol synthase; pheny 95.4 0.012 4.2E-07 52.8 4.3 67 117-183 4-87 (321)
493 3hhp_A Malate dehydrogenase; M 95.3 0.033 1.1E-06 50.9 7.1 101 118-220 1-127 (312)
494 1xq6_A Unknown protein; struct 95.3 0.013 4.6E-07 50.2 4.2 68 115-183 2-79 (253)
495 4gsl_A Ubiquitin-like modifier 95.3 0.019 6.4E-07 57.1 5.7 74 63-150 285-360 (615)
496 2wyu_A Enoyl-[acyl carrier pro 95.3 0.0078 2.7E-07 52.9 2.7 37 114-150 5-44 (261)
497 2ydy_A Methionine adenosyltran 95.3 0.014 4.8E-07 52.2 4.5 65 117-182 2-69 (315)
498 3e5r_O PP38, glyceraldehyde-3- 95.3 0.034 1.2E-06 51.4 7.1 30 118-147 4-34 (337)
499 3nrc_A Enoyl-[acyl-carrier-pro 95.3 0.083 2.8E-06 46.7 9.5 39 112-150 21-62 (280)
500 4hv4_A UDP-N-acetylmuramate--L 95.2 0.021 7E-07 55.5 5.7 112 116-227 21-148 (494)
No 1
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=4.6e-66 Score=486.87 Aligned_cols=277 Identities=77% Similarity=1.219 Sum_probs=261.4
Q ss_pred hchhHHH-hcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCC
Q 021995 24 SRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGE 102 (304)
Q Consensus 24 ~~~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~ 102 (304)
..+++++ +++|+||+|++.++|+|+ +|+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|.
T Consensus 74 ~~~~~~~l~~~p~Lk~i~~~g~G~d~----id~~~a~~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~ 149 (351)
T 3jtm_A 74 AYVTAERIKKAKNLKLLLTAGIGSDH----IDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGE 149 (351)
T ss_dssp CCBCHHHHHHCSSCCEEEESSSCCTT----BCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTC
T ss_pred CCCCHHHHhhCCCCeEEEEeCeeecc----cCHHHHHhcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCC
Confidence 4688776 789999999999999985 55999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCC
Q 021995 103 WNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 103 w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p 182 (304)
|........+++|+|++|||||+|.||+.+|++|++|||+|++|||++.+.+.+.+.|+...+++++++++||+|++|+|
T Consensus 150 W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P 229 (351)
T 3jtm_A 150 WNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMP 229 (351)
T ss_dssp CCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSC
T ss_pred CccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCC
Confidence 98643323467899999999999999999999999999999999998777777777888887899999999999999999
Q ss_pred CChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEEccCCCcC
Q 021995 183 LTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGT 262 (304)
Q Consensus 183 ~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~lTPHia~~ 262 (304)
++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||+|.++|||.+|||++|||+||+
T Consensus 230 lt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvilTPHia~~ 309 (351)
T 3jtm_A 230 LTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGT 309 (351)
T ss_dssp CCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCGGG
T ss_pred CCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCccEEEeCCCCCCCCCCCChhhcCCCEEECCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHcCCCCCCCceeecCCccCCCCC
Q 021995 263 TIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAPQYR 304 (304)
Q Consensus 263 t~e~~~~~~~~~~~~l~~~~~g~~~~~~n~~~~~~~~~~~~~ 304 (304)
|.+++.++...+.+||.+|++|++++..|.|+..+.+.+|||
T Consensus 310 t~ea~~~~~~~~~~nl~~~~~g~~~~~~~~i~~~~~~~~~~~ 351 (351)
T 3jtm_A 310 TIDAQLRYAAGTKDMLERYFKGEDFPTENYIVKDGELAPQYR 351 (351)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTCCCCGGGEEEETTEECGGGC
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCCCCCceEEecCCccccccC
Confidence 999999999999999999999999888999999999999998
No 2
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=4.6e-65 Score=477.61 Aligned_cols=267 Identities=25% Similarity=0.344 Sum_probs=242.6
Q ss_pred ccchhchhHHH-hcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHH
Q 021995 20 LRSSSRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQV 98 (304)
Q Consensus 20 ~~~~~~~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~ 98 (304)
+++.+++++++ +++|+||+|++.++|+|+ +|+++|+++||.|+|+||+++.+||||+++++|++.|++...++.+
T Consensus 48 v~~~~~i~~~~l~~~p~Lk~I~~~~~G~d~----id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~ 123 (334)
T 3kb6_A 48 VFVYDKLTEELLSKMPRLKLIHTRSVGFDH----IDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRV 123 (334)
T ss_dssp ECTTSCBCHHHHHTCTTCCEEEESSSCCTT----BCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred EeCCCCCCHHHHhcCCCCcEEEECCcccch----hcHHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhccccccccc
Confidence 56678899887 789999999999999985 4599999999999999999999999999999999999999999999
Q ss_pred HhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEE
Q 021995 99 ISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVV 178 (304)
Q Consensus 99 ~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi 178 (304)
+++.|..... ..+++|.|+|+||||+|+||+.+|+++++|||+|++||+... +...+.++.+ .++++++++||+|+
T Consensus 124 ~~~~~~~~~~-~~~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~--~~~~~~~~~~-~~l~ell~~sDivs 199 (334)
T 3kb6_A 124 KKLNFSQDSE-ILARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKR--EDLKEKGCVY-TSLDELLKESDVIS 199 (334)
T ss_dssp HTTCCCCCGG-GCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHTTCEE-CCHHHHHHHCSEEE
T ss_pred cccccccccc-cccceecCcEEEEECcchHHHHHHHhhcccCceeeecCCccc--hhhhhcCcee-cCHHHHHhhCCEEE
Confidence 9999875432 357899999999999999999999999999999999998642 3344556665 48999999999999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCC-------------
Q 021995 179 VNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDH------------- 245 (304)
Q Consensus 179 ~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~------------- 245 (304)
+|+|+|++|+++|+++.|++||+|++|||+|||++||++||++||++|+|.||+||||++||++.++
T Consensus 200 lh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~~ 279 (334)
T 3kb6_A 200 LHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLK 279 (334)
T ss_dssp ECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHH
T ss_pred EcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999987666
Q ss_pred --CccCCCCeEEccCCCcCCHHHHHHHHHHHHHHHHHHHcCCCCC-CCceee
Q 021995 246 --PWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFP-VQNYIV 294 (304)
Q Consensus 246 --~l~~~~nv~lTPHia~~t~e~~~~~~~~~~~~l~~~~~g~~~~-~~n~~~ 294 (304)
|||.+|||++|||+||+|.|+++++...+.+||.+|++|++.+ ..|.|+
T Consensus 280 ~~~L~~~~nvilTPHia~~T~ea~~~~~~~~~~ni~~~l~Ge~~~~~~n~v~ 331 (334)
T 3kb6_A 280 ILELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFVKGDLEQIKGNFVV 331 (334)
T ss_dssp HHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCGGGGGGGEEE
T ss_pred chhhccCCCEEECCchhhChHHHHHHHHHHHHHHHHHHHcCCCCcCCCCcCC
Confidence 6788999999999999999999999999999999999999873 345543
No 3
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=3.6e-63 Score=465.88 Aligned_cols=263 Identities=24% Similarity=0.410 Sum_probs=241.6
Q ss_pred ccc-cchhchhHHH-hcC-CCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchh
Q 021995 18 GFL-RSSSRFSRHY-ASS-GSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPG 94 (304)
Q Consensus 18 ~~~-~~~~~~~~~l-~~~-~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~ 94 (304)
+++ ++.+++++++ +++ |+||+|++.++|+|+ +|+++|+++||.|+|+||+++.+||||++++||++.|++..+
T Consensus 74 ~li~~~~~~i~~~~l~~~~~~Lk~I~~~~~G~D~----id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~ 149 (345)
T 4g2n_A 74 VLFVTATEAITAEVIRKLQPGLKTIATLSVGYDH----IDMAAARSLGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEA 149 (345)
T ss_dssp EEEECTTSCBCHHHHHHTTTTCCEEEESSSCCTT----BCHHHHHHTTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred EEEEeCCCCCCHHHHHhhcCCceEEEEcCCcccc----cCHHHHHhCCEEEEECCcccchHHHHHHHHHHHHHHhCHHHH
Confidence 444 4457899887 665 799999999999985 569999999999999999999999999999999999999999
Q ss_pred hHHHHhCCccccc-ccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCc
Q 021995 95 HHQVISGEWNVAG-VAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPK 173 (304)
Q Consensus 95 ~~~~~~~~w~~~~-~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~ 173 (304)
.+.+++|.|.... ....+++|+|+||||||+|.||+.+|++|++|||+|++|||++.+.+... ++.+.+++++++++
T Consensus 150 ~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g~~~~~~l~ell~~ 227 (345)
T 4g2n_A 150 DRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEE--GAIYHDTLDSLLGA 227 (345)
T ss_dssp HHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--TCEECSSHHHHHHT
T ss_pred HHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--CCeEeCCHHHHHhh
Confidence 9999999997532 12347899999999999999999999999999999999999865544332 77776799999999
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCe
Q 021995 174 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQ 253 (304)
Q Consensus 174 aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv 253 (304)
||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++|| +.++|||.+|||
T Consensus 228 sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP-~~~~pL~~~~nv 306 (345)
T 4g2n_A 228 SDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEP-AIDPRYRSLDNI 306 (345)
T ss_dssp CSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT-SCCTTGGGCTTE
T ss_pred CCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCC-CCCchHHhCCCE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 889999999999
Q ss_pred EEccCCCcCCHHHHHHHHHHHHHHHHHHHcCCCC
Q 021995 254 AMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDF 287 (304)
Q Consensus 254 ~lTPHia~~t~e~~~~~~~~~~~~l~~~~~g~~~ 287 (304)
++|||+|++|.+++.++...+.+||.+|++|+++
T Consensus 307 ilTPHia~~t~e~~~~~~~~~~~ni~~~l~g~~~ 340 (345)
T 4g2n_A 307 FLTPHIGSATHETRDAMGWLLIQGIEALNQSDVP 340 (345)
T ss_dssp EECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEcCccCcCCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999987
No 4
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=7.1e-62 Score=459.76 Aligned_cols=274 Identities=22% Similarity=0.258 Sum_probs=240.7
Q ss_pred chhchhHHH-hcCCCcEEEEEe-eecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHH
Q 021995 22 SSSRFSRHY-ASSGSKKIVGVF-YKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVI 99 (304)
Q Consensus 22 ~~~~~~~~l-~~~~~lk~i~~~-~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~ 99 (304)
+.+++++++ +++|+||+|+.+ ++|+|+ +|+++|+++||.|+|+||+++.+||||+++++|++.|++..+.+.++
T Consensus 82 ~~~~i~~~~l~~~p~Lk~I~~~~~~G~d~----iD~~~a~~~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r 157 (365)
T 4hy3_A 82 GQPPLSAETLARMPALRSILNVESNLLNN----MPYEVLFQRGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQ 157 (365)
T ss_dssp ECCCCCHHHHTTCTTCCEEECCSSSCCSC----SCTTHHHHSCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHH
T ss_pred eCCCCCHHHHhhCCCCeEEEEecccccCc----ccHHHHhcCCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHH
Confidence 557888887 789999999975 788985 55889999999999999999999999999999999999999999999
Q ss_pred hCCcccccc-cccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEE
Q 021995 100 SGEWNVAGV-AYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVV 178 (304)
Q Consensus 100 ~~~w~~~~~-~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi 178 (304)
+|.|.+... ...+.+|+|+||||||+|.||+.+|+++++||++|++||++. +.+.+...|+.. .++++++++||+|+
T Consensus 158 ~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~-~~~~~~~~g~~~-~~l~ell~~aDvV~ 235 (365)
T 4hy3_A 158 EGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWL-PRSMLEENGVEP-ASLEDVLTKSDFIF 235 (365)
T ss_dssp HTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSS-CHHHHHHTTCEE-CCHHHHHHSCSEEE
T ss_pred cCCccccccccccccccCCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCC-CHHHHhhcCeee-CCHHHHHhcCCEEE
Confidence 999554321 234679999999999999999999999999999999999975 455556677765 48999999999999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEEccC
Q 021995 179 VNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPH 258 (304)
Q Consensus 179 ~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~lTPH 258 (304)
+|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|. |+||||++||+|.++|||.+|||++|||
T Consensus 236 l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvilTPH 314 (365)
T 4hy3_A 236 VVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFIRSAH 314 (365)
T ss_dssp ECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEEECCS
T ss_pred EcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCCCCCChhhcCCCEEECCc
Confidence 999999999999999999999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCceeecCCccCCCCC
Q 021995 259 VSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAPQYR 304 (304)
Q Consensus 259 ia~~t~e~~~~~~~~~~~~l~~~~~g~~~~~~n~~~~~~~~~~~~~ 304 (304)
+||+|.|++.++...+.+||.+|++|+|+. +.++.+.+..+++|
T Consensus 315 ia~~t~e~~~~~~~~~~~ni~~~~~G~~~~--~~vn~~~~~~~~~r 358 (365)
T 4hy3_A 315 RAGALDSAFKKMGDMVLEDMDLMDRGLPPM--RCKRAERETVSRMR 358 (365)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHTTCCCC--SSEECCSCCC----
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHcCCCcc--cccccchhhhhhcc
Confidence 999999999999999999999999999983 43443556666655
No 5
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=4.4e-62 Score=456.85 Aligned_cols=265 Identities=24% Similarity=0.376 Sum_probs=245.2
Q ss_pred cccc-chhchhHHH-hcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhh
Q 021995 18 GFLR-SSSRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGH 95 (304)
Q Consensus 18 ~~~~-~~~~~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~ 95 (304)
+++. ..+++++++ +++|+||+|++.++|+|+ +|+++|.++||.|+|+||+++.+||||+++++|++.|++..++
T Consensus 48 ~~i~~~~~~i~~~~l~~~~~Lk~I~~~~~G~d~----id~~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~ 123 (330)
T 4e5n_A 48 AMMAFMPDRVDADFLQACPELRVIGCALKGFDN----FDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAAD 123 (330)
T ss_dssp EEEECTTCCBCHHHHHHCTTCCEEEESSSCCTT----BCHHHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred EEEEeCCCCCCHHHHhhCCCCcEEEECCCcccc----cCHHHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHH
Confidence 4443 677898886 778999999999999985 5599999999999999999999999999999999999999999
Q ss_pred HHHHhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCC
Q 021995 96 HQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCD 175 (304)
Q Consensus 96 ~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aD 175 (304)
+.+++|.|........+++|.|+||||||+|.||+.+|+++++||++|++|||++.+.+.+...|+... ++++++++||
T Consensus 124 ~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~l~ell~~aD 202 (330)
T 4e5n_A 124 AFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQV-ACSELFASSD 202 (330)
T ss_dssp HHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEEC-CHHHHHHHCS
T ss_pred HHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeC-CHHHHHhhCC
Confidence 999999997322223467999999999999999999999999999999999998756666667787665 8999999999
Q ss_pred EEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCC-------CCCCCCCcc
Q 021995 176 IVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQ-------PAPKDHPWR 248 (304)
Q Consensus 176 vVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~e-------p~~~~~~l~ 248 (304)
+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++| |++.++|||
T Consensus 203 vV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~ 282 (330)
T 4e5n_A 203 FILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALL 282 (330)
T ss_dssp EEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHH
T ss_pred EEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred CCCCeEEccCCCcCCHHHHHHHHHHHHHHHHHHHcCCCC
Q 021995 249 YMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDF 287 (304)
Q Consensus 249 ~~~nv~lTPHia~~t~e~~~~~~~~~~~~l~~~~~g~~~ 287 (304)
.+|||++|||+||+|.++++++...+.+||.+|++|+++
T Consensus 283 ~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~g~~~ 321 (330)
T 4e5n_A 283 AHPNTLFTPHIGSAVRAVRLEIERCAAQNILQALAGERP 321 (330)
T ss_dssp TCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred cCCCEEECCcCCCChHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999887
No 6
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=7.3e-62 Score=458.58 Aligned_cols=270 Identities=23% Similarity=0.309 Sum_probs=247.8
Q ss_pred cchhchhHHH-hcCCCcEEEEEeeecc----cCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhh
Q 021995 21 RSSSRFSRHY-ASSGSKKIVGVFYKGN----EYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGH 95 (304)
Q Consensus 21 ~~~~~~~~~l-~~~~~lk~i~~~~~G~----d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~ 95 (304)
++.+++++++ +++|+||+|++.++|+ | ++|+++|+++||.|+|+||+ +.+||||+++++|++.|++..+.
T Consensus 56 ~~~~~~~~~~l~~~~~Lk~I~~~g~G~~~~~d----~id~~~a~~~gI~V~n~pg~-~~~vAE~al~l~L~~~R~~~~~~ 130 (352)
T 3gg9_A 56 RERTRVTRQLLDRLPKLKIISQTGRVSRDAGG----HIDLEACTDKGVVVLEGKGS-PVAPAELTWALVMAAQRRIPQYV 130 (352)
T ss_dssp TTSSCBCHHHHTTCTTCCEEEESSCCCCSSSC----SBCHHHHHHHTCEEECCCCC-SHHHHHHHHHHHHHHHTTHHHHH
T ss_pred CCCCCCCHHHHhhCCCCeEEEEeCcccCCccC----cccHHHHHhCCeEEEECCCC-cHHHHHHHHHHHHHHHhhHHHHH
Confidence 4568898887 7789999999999999 6 56799999999999999999 99999999999999999999999
Q ss_pred HHHHhCCccccc-----c---cccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCH
Q 021995 96 HQVISGEWNVAG-----V---AYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDL 167 (304)
Q Consensus 96 ~~~~~~~w~~~~-----~---~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l 167 (304)
+.+++|.|.... + ...+++|.|+||||||+|.||+.+|+++++||++|++||++. +.+.+...|+...+++
T Consensus 131 ~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~~~~~g~~~~~~l 209 (352)
T 3gg9_A 131 ASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGREN-SKERARADGFAVAESK 209 (352)
T ss_dssp HHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHH-HHHHHHHTTCEECSSH
T ss_pred HHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCC-CHHHHHhcCceEeCCH
Confidence 999999998642 1 124679999999999999999999999999999999999864 3344556788877799
Q ss_pred HhhcCcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCc
Q 021995 168 DTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPW 247 (304)
Q Consensus 168 ~ell~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l 247 (304)
++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||+|.++||
T Consensus 210 ~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL 289 (352)
T 3gg9_A 210 DALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTL 289 (352)
T ss_dssp HHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGG
T ss_pred HHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEccCCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCceeecC
Q 021995 248 RYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKA 296 (304)
Q Consensus 248 ~~~~nv~lTPHia~~t~e~~~~~~~~~~~~l~~~~~g~~~~~~n~~~~~ 296 (304)
|.+|||++|||+|++|.++++++...+.+||.+|++|+|++.+|....+
T Consensus 290 ~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~G~p~~~Vn~~~~~ 338 (352)
T 3gg9_A 290 LRMENCICTPHIGYVERESYEMYFGIAFQNILDILQGNVDSVANPTALA 338 (352)
T ss_dssp GGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCTTBSCGGGSS
T ss_pred hcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCcccCHHHHH
Confidence 9999999999999999999999999999999999999988777754444
No 7
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=9.5e-62 Score=460.17 Aligned_cols=276 Identities=46% Similarity=0.769 Sum_probs=252.0
Q ss_pred hchhHHH-hcCCCcEEEEEeeecccCCCCcccHHHHHhC--CcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHh
Q 021995 24 SRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNFLAAAAA--GLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVIS 100 (304)
Q Consensus 24 ~~~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~--gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~ 100 (304)
+.+++++ +.+|+||+|++.++|+|+ +|+++|.++ ||.|+|+||+++.+||||++++||++.|++..+++.+++
T Consensus 72 ~~~~~~~l~~~~~Lk~I~~~~~G~d~----id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~ 147 (364)
T 2j6i_A 72 AYITKERIDKAKKLKLVVVAGVGSDH----IDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIIN 147 (364)
T ss_dssp CCBCHHHHHHCTTCCEEEESSSCCTT----BCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHT
T ss_pred CCCCHHHHhhCCCCeEEEECCccccc----ccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHh
Confidence 3577775 778999999999999985 458999999 999999999999999999999999999999999999999
Q ss_pred CCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCe-EEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEE
Q 021995 101 GEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCN-LLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVV 179 (304)
Q Consensus 101 ~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~-V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~ 179 (304)
|.|........+.+|.|++|||||+|+||+.+|++|++||++ |++||+++.+.+.+.+.|+....++++++++||+|++
T Consensus 148 g~W~~~~~~~~~~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l 227 (364)
T 2j6i_A 148 HDWEVAAIAKDAYDIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTV 227 (364)
T ss_dssp TCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEE
T ss_pred CCCCcCcccCCcccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEE
Confidence 999753222246789999999999999999999999999997 9999998766666677787776789999999999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCC--C---CeE
Q 021995 180 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYM--P---NQA 254 (304)
Q Consensus 180 ~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~--~---nv~ 254 (304)
|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||+|.++|||.+ | ||+
T Consensus 228 ~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvi 307 (364)
T 2j6i_A 228 NAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNA 307 (364)
T ss_dssp CCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEE
T ss_pred CCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 9 999
Q ss_pred EccCCCcCCHHHHHHHHHHHHHHHHHHHcCC-CCCCCceeecCCccCCCC
Q 021995 255 MTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE-DFPVQNYIVKAGELAPQY 303 (304)
Q Consensus 255 lTPHia~~t~e~~~~~~~~~~~~l~~~~~g~-~~~~~n~~~~~~~~~~~~ 303 (304)
+|||+|++|.+++.++...+.+|+.+|++|+ |++..|.++.+..|++|.
T Consensus 308 lTPHia~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~~n~v~~~~~y~~~~ 357 (364)
T 2j6i_A 308 MTPHYSGTTLDAQTRYAQGTVNILESFFTGKFDYRPQDIILLNGEYGTKA 357 (364)
T ss_dssp ECCSCGGGSHHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEBTTBC----
T ss_pred ECCccCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCCceecCCcCcchhh
Confidence 9999999999999999999999999999998 557799999999998873
No 8
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=1e-61 Score=455.23 Aligned_cols=259 Identities=22% Similarity=0.358 Sum_probs=212.8
Q ss_pred ccc-cchhchhHHH-hcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhh
Q 021995 18 GFL-RSSSRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGH 95 (304)
Q Consensus 18 ~~~-~~~~~~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~ 95 (304)
+++ ++.+++++++ +++|+||+|++.++|+|+ +|+++|+++||.|+|+||+++.+||||++++||+++|++..+.
T Consensus 74 ~li~~~~~~i~~~~l~~~p~Lk~I~~~g~G~d~----id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~ 149 (340)
T 4dgs_A 74 AVATGGGAGLSNEWMEKLPSLGIIAINGVGTDK----VDLARARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGD 149 (340)
T ss_dssp EEEEETTTCBCHHHHHHCSSCCEEEEESSCCTT----BCHHHHHHTTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred EEEEcCCCCCCHHHHhhCCCCEEEEECCCCccc----cCHHHHHhCCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHH
Confidence 444 4667899887 789999999999999984 5699999999999999999999999999999999999999999
Q ss_pred HHHHhCCcccc-cccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcC
Q 021995 96 HQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKC 174 (304)
Q Consensus 96 ~~~~~~~w~~~-~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~a 174 (304)
+.+++|.|.+. .. ..+++|+|+||||||+|.||+.+|+++++||++|++|||++.. ..+.....++++++++|
T Consensus 150 ~~~~~g~W~~~~~~-~~~~~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~-----~~~~~~~~sl~ell~~a 223 (340)
T 4dgs_A 150 RLVREGRWAAGEQL-PLGHSPKGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLS-----GVDWIAHQSPVDLARDS 223 (340)
T ss_dssp HHHHTTCC-------CCCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCT-----TSCCEECSSHHHHHHTC
T ss_pred HHHhcCCcccccCc-CccccccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCccc-----ccCceecCCHHHHHhcC
Confidence 99999999864 22 2367999999999999999999999999999999999997643 22445567999999999
Q ss_pred CEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeE
Q 021995 175 DIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQA 254 (304)
Q Consensus 175 DvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~ 254 (304)
|+|++|+|++++|+++++++.|+.||+|++|||++||+++|+++|+++|++|+|.||+||||++||++. +|||.+|||+
T Consensus 224 DvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~-~~L~~~~nvi 302 (340)
T 4dgs_A 224 DVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAIR-SEFHTTPNTV 302 (340)
T ss_dssp SEEEECC----------CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCSSSSSCC-SHHHHSSSEE
T ss_pred CEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCCCc-cchhhCCCEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999876 4999999999
Q ss_pred EccCCCcCCHHHHHHHHHHHHHHHHHHHcCCCC
Q 021995 255 MTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDF 287 (304)
Q Consensus 255 lTPHia~~t~e~~~~~~~~~~~~l~~~~~g~~~ 287 (304)
+|||+|++|.|+++++...+.+||.+|++|+++
T Consensus 303 lTPHia~~t~e~~~~~~~~~~~nl~~~~~g~~~ 335 (340)
T 4dgs_A 303 LMPHQGSATVETRMAMGKLVLANLAAHFAGEKA 335 (340)
T ss_dssp ECSSCSSCCHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred EcCcCCcCCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999987
No 9
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=6e-62 Score=454.44 Aligned_cols=270 Identities=21% Similarity=0.312 Sum_probs=237.8
Q ss_pred ccccchhchhHHH-hcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchh-h
Q 021995 18 GFLRSSSRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPG-H 95 (304)
Q Consensus 18 ~~~~~~~~~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~-~ 95 (304)
.++....++.+.+ +++|+||+|++.++|+|+ +|+++|.++||.|+|+||+++.+||||+++++|++.|++..+ .
T Consensus 43 ~l~~~~~~~~~~l~~~~~~Lk~I~~~~~G~d~----id~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~ 118 (324)
T 3evt_A 43 VMYGNHPLLKTILARPTNQLKFVQVISAGVDY----LPLKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWL 118 (324)
T ss_dssp EEESCCTHHHHHHHSTTCCCCEEECSSSCCTT----SCHHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred EEEECCcChHHHHHhhCCCceEEEECCccccc----cCHHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHH
Confidence 4455445563445 578999999999999985 459999999999999999999999999999999999999998 8
Q ss_pred HHHHhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCC
Q 021995 96 HQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCD 175 (304)
Q Consensus 96 ~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aD 175 (304)
+.++++.|.+.. .+++|+|+||||||+|.||+.+|++|++||++|++|||++.+.+.... .....++++++++||
T Consensus 119 ~~~~~~~W~~~~---~~~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~--~~~~~~l~ell~~aD 193 (324)
T 3evt_A 119 NQRGARQWALPM---TTSTLTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHE--TVAFTATADALATAN 193 (324)
T ss_dssp HHTTTCCSSCSS---CCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCSE--EEEGGGCHHHHHHCS
T ss_pred HHHhcCCcccCC---CCccccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhHhh--ccccCCHHHHHhhCC
Confidence 889999998642 467999999999999999999999999999999999998654332211 123458999999999
Q ss_pred EEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEE
Q 021995 176 IVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAM 255 (304)
Q Consensus 176 vVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~l 255 (304)
+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||+|.++|||.+|||++
T Consensus 194 vV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvil 273 (324)
T 3evt_A 194 FIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLI 273 (324)
T ss_dssp EEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEE
T ss_pred EEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCceeecCC
Q 021995 256 TPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAG 297 (304)
Q Consensus 256 TPHia~~t~e~~~~~~~~~~~~l~~~~~g~~~~~~n~~~~~~ 297 (304)
|||+||+|.++++++...+.+||.+|++|+++ ..|.++.+.
T Consensus 274 TPHia~~t~~~~~~~~~~~~~nl~~~l~~~~~-~~n~V~~~~ 314 (324)
T 3evt_A 274 TPHISGQIAHFRATVFPIFAANFAQFVKDGTL-VRNQVDLNR 314 (324)
T ss_dssp CCSCTTCCCCHHHHHHHHHHHHHHHHHHHSCC-CSCBCC---
T ss_pred cCccccChHHHHHHHHHHHHHHHHHHHhCCCC-CCceECccc
Confidence 99999999999999999999999999976542 256666553
No 10
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=3.4e-62 Score=458.20 Aligned_cols=266 Identities=25% Similarity=0.324 Sum_probs=242.9
Q ss_pred cchhchhHHH-hcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHH
Q 021995 21 RSSSRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVI 99 (304)
Q Consensus 21 ~~~~~~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~ 99 (304)
.+.+++++++ +++|+||+|++.++|+|+ +|+++|+++||.|+|+||+++.+||||++++||++.|++..+++.++
T Consensus 49 ~~~~~i~~~~l~~~~~Lk~I~~~~~G~d~----id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~ 124 (334)
T 2pi1_A 49 FVYDKLTEELLSKMPRLKLIHTRSVGFDH----IDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVK 124 (334)
T ss_dssp CTTSCBCHHHHTTCTTCCEEEESSSCCTT----BCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHT
T ss_pred cCCCCCCHHHHhhCCCCeEEEECCccccc----cCHHHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 3478899886 778999999999999985 46999999999999999999999999999999999999999999999
Q ss_pred hCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEE
Q 021995 100 SGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVV 179 (304)
Q Consensus 100 ~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~ 179 (304)
+|.|.+.. ...+++|+|+||||||+|.||+.+|++|++|||+|++||+++... ..+.|+... ++++++++||+|++
T Consensus 125 ~g~w~~~~-~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~g~~~~-~l~ell~~aDvV~l 200 (334)
T 2pi1_A 125 KLNFSQDS-EILARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRED--LKEKGCVYT-SLDELLKESDVISL 200 (334)
T ss_dssp TTCCCCCG-GGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHHTTCEEC-CHHHHHHHCSEEEE
T ss_pred cCCCcccc-CccceeccCceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchh--hHhcCceec-CHHHHHhhCCEEEE
Confidence 99998651 124779999999999999999999999999999999999976432 224577665 69999999999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCC---------------CCC
Q 021995 180 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA---------------PKD 244 (304)
Q Consensus 180 ~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~---------------~~~ 244 (304)
|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||+ |.+
T Consensus 201 ~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~ 280 (334)
T 2pi1_A 201 HVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKI 280 (334)
T ss_dssp CCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHH
T ss_pred eCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEeecCCCCCCccccccccccccccCccC
Confidence 99999999999999999999999999999999999999999999999999999999999998 578
Q ss_pred CCccCCCCeEEccCCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCceeecC
Q 021995 245 HPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKA 296 (304)
Q Consensus 245 ~~l~~~~nv~lTPHia~~t~e~~~~~~~~~~~~l~~~~~g~~~~~~n~~~~~ 296 (304)
+|||.+|||++|||+|++|.++++++...+.+||.+|++|+++ .|.|++.
T Consensus 281 ~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~g~~~--~~~Vn~~ 330 (334)
T 2pi1_A 281 LELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFVKGDLE--QIKGNFV 330 (334)
T ss_dssp HHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCGG--GGGGGEE
T ss_pred ChhhcCCCEEECCccccChHHHHHHHHHHHHHHHHHHHcCCCC--CceECcc
Confidence 8999999999999999999999999999999999999999987 4555443
No 11
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=6.2e-61 Score=459.06 Aligned_cols=267 Identities=29% Similarity=0.450 Sum_probs=238.6
Q ss_pred ccchhchhHHH-hcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHH
Q 021995 20 LRSSSRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQV 98 (304)
Q Consensus 20 ~~~~~~~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~ 98 (304)
+++.+++++++ +++|+||+|++.++|+| ++|+++|+++||.|+|+||+++.+||||+++++|+++|++....+.+
T Consensus 64 v~~~~~i~~~~l~~~p~Lk~I~~~~~G~d----~IDl~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~ 139 (416)
T 3k5p_A 64 IRSRTQLTEEIFAAANRLIAVGCFSVGTN----QVELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSA 139 (416)
T ss_dssp ECSSCCBCHHHHHHCTTCCEEEECSSCCT----TBCHHHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred EcCCCCCCHHHHHhCCCcEEEEECccccC----ccCHHHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhh
Confidence 67888999887 78999999999999998 45699999999999999999999999999999999999999999999
Q ss_pred HhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEE
Q 021995 99 ISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVV 178 (304)
Q Consensus 99 ~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi 178 (304)
++|.|.+.. ..+++|+|+|+||||+|.||+.+|+++++|||+|++||+++.... .+.....++++++++||+|+
T Consensus 140 ~~g~W~~~~--~~~~el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~~----~~~~~~~sl~ell~~aDvV~ 213 (416)
T 3k5p_A 140 HAGGWEKTA--IGSREVRGKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQY----GNVKPAASLDELLKTSDVVS 213 (416)
T ss_dssp HTTCCCCCC--TTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCCB----TTBEECSSHHHHHHHCSEEE
T ss_pred hcccccccC--CCCccCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhcc----cCcEecCCHHHHHhhCCEEE
Confidence 999998754 246799999999999999999999999999999999998753221 13455679999999999999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCC----CCccCCCCeE
Q 021995 179 VNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKD----HPWRYMPNQA 254 (304)
Q Consensus 179 ~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~----~~l~~~~nv~ 254 (304)
+|+|++++|+++++++.|++||+|++|||+|||+++|+++|+++|++|+|.||+||||++||++.+ +|||.+|||+
T Consensus 214 lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvi 293 (416)
T 3k5p_A 214 LHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVI 293 (416)
T ss_dssp ECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEE
T ss_pred EeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEE
Confidence 999999999999999999999999999999999999999999999999999999999999998765 7999999999
Q ss_pred EccCCCcCCHHHHHHHHHHHHHHHHHHHc-CCCCCCCceeecC
Q 021995 255 MTPHVSGTTIDAQLRYAAGVKDMLDRYFK-GEDFPVQNYIVKA 296 (304)
Q Consensus 255 lTPHia~~t~e~~~~~~~~~~~~l~~~~~-g~~~~~~n~~~~~ 296 (304)
+|||+||+|.|+++++...+.+||.+|++ |.+.+.+|.+...
T Consensus 294 lTPHig~~T~ea~~~~~~~~~~nl~~~l~~g~~~~~Vn~p~~~ 336 (416)
T 3k5p_A 294 LTPHIGGSTEEAQERIGTEVTRKLVEYSDVGSTVGAVNFPQVQ 336 (416)
T ss_dssp ECCSCTTCCHHHHHHHHHHHHHHHHHHHHHCCCTTBSSSCCCC
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCceeeCCCcC
Confidence 99999999999999999999999999995 5555777765443
No 12
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=1.8e-60 Score=454.07 Aligned_cols=274 Identities=44% Similarity=0.737 Sum_probs=248.4
Q ss_pred hchhHHH-hcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCC
Q 021995 24 SRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGE 102 (304)
Q Consensus 24 ~~~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~ 102 (304)
+.+++++ +++|+||+|++.++|+|+ +|+++|+++||.|+|+||+++.+||||++++||++.|++...++.+++|.
T Consensus 101 ~~i~~~~l~~~p~Lk~I~~~g~G~d~----iD~~aa~~~gI~V~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~ 176 (393)
T 2nac_A 101 AYLTPERIAKAKNLKLALTAGIGSDH----VDLQSAIDRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGG 176 (393)
T ss_dssp CCBCHHHHHHCTTCCEEEESSSCCTT----BCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTC
T ss_pred CCCCHHHHhhCCCCcEEEEcCccccc----cCHHHHhcCCEEEEeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCC
Confidence 4677776 789999999999999985 56999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCC
Q 021995 103 WNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 103 w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p 182 (304)
|........+.+|.|++|||||+|.||+.+|+++++|||+|++||++..+.+.+...|+....++++++++||+|++|+|
T Consensus 177 W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~P 256 (393)
T 2nac_A 177 WNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCP 256 (393)
T ss_dssp CCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSC
T ss_pred CCccccccCCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecC
Confidence 97532112357899999999999999999999999999999999998766666677788776789999999999999999
Q ss_pred CChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEEccCCCcC
Q 021995 183 LTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGT 262 (304)
Q Consensus 183 ~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~lTPHia~~ 262 (304)
++++|+++++++.|+.||+|++|||++||+++|+++|.++|++|+|.||+||||++||++.++|||.+||+++|||++++
T Consensus 257 lt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~pL~~~~nvilTPHia~~ 336 (393)
T 2nac_A 257 LHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGT 336 (393)
T ss_dssp CCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCTTC
T ss_pred CchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCCCCCChhHcCCCEEECCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHcCCCCCCCceeecCCccCC
Q 021995 263 TIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAP 301 (304)
Q Consensus 263 t~e~~~~~~~~~~~~l~~~~~g~~~~~~n~~~~~~~~~~ 301 (304)
|.+++.++...+.+||++|++|+++.....++..+.+.|
T Consensus 337 T~e~~~~~~~~~~~nl~~~~~G~~~~~~~~~v~~~~~~~ 375 (393)
T 2nac_A 337 TLTAQARYAAGTREILECFFEGRPIRDEYLIVQGGALAG 375 (393)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTCCCCGGGEEEETTEEC-
T ss_pred cHHHHHHHHHHHHHHHHHHHcCCCCcceeEeccCCcccc
Confidence 999999999999999999999998843333455555554
No 13
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=5.2e-61 Score=447.71 Aligned_cols=258 Identities=21% Similarity=0.257 Sum_probs=229.8
Q ss_pred chhHH-HhcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCc
Q 021995 25 RFSRH-YASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEW 103 (304)
Q Consensus 25 ~~~~~-l~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w 103 (304)
.++++ ++++|+||||++.++|+|+++ ++++. +||.|+|+||+++.+||||+++++|++.|++..+.+.+++|.|
T Consensus 56 ~~~~~~l~~~~~Lk~I~~~~~G~d~id----~~~~~-~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W 130 (324)
T 3hg7_A 56 ARAKPLLAKANKLSWFQSTYAGVDVLL----DARCR-RDYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLW 130 (324)
T ss_dssp HHHGGGGGGCTTCCEEEESSSCCGGGS----CTTSC-CSSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC
T ss_pred CCCHHHHhhCCCceEEEECCCCCCccC----hHHHh-CCEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCC
Confidence 44444 578999999999999999654 55664 5999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCC
Q 021995 104 NVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPL 183 (304)
Q Consensus 104 ~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~ 183 (304)
... .+++|+|+||||||+|.||+.+|++|++||++|++|||++...+... +.....++++++++||+|++|+|+
T Consensus 131 ~~~----~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--~~~~~~~l~ell~~aDvV~l~lPl 204 (324)
T 3hg7_A 131 QSH----PYQGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFD--QVYQLPALNKMLAQADVIVSVLPA 204 (324)
T ss_dssp CCC----CCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTCS--EEECGGGHHHHHHTCSEEEECCCC
T ss_pred cCC----CCcccccceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhhh--cccccCCHHHHHhhCCEEEEeCCC
Confidence 853 35799999999999999999999999999999999999764332211 112346899999999999999999
Q ss_pred ChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEEccCCCcCC
Q 021995 184 TEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTT 263 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~lTPHia~~t 263 (304)
+++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||+|.++|||.+|||++|||+|++|
T Consensus 205 t~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t 284 (324)
T 3hg7_A 205 TRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAYS 284 (324)
T ss_dssp CSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEECCSCSSCC
T ss_pred CHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEeCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCceeecCC
Q 021995 264 IDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAG 297 (304)
Q Consensus 264 ~e~~~~~~~~~~~~l~~~~~g~~~~~~n~~~~~~ 297 (304)
.+ .++...+.+||.+|++|+++ .|.++.+.
T Consensus 285 ~~--~~~~~~~~~nl~~~~~G~~~--~~~V~~~~ 314 (324)
T 3hg7_A 285 FP--DDVAQIFVRNYIRFIDGQPL--DGKIDFDK 314 (324)
T ss_dssp CH--HHHHHHHHHHHHHHHTTCCC--TTBCCCC-
T ss_pred HH--HHHHHHHHHHHHHHHcCCCC--cceEChhh
Confidence 76 57888999999999999987 46565553
No 14
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=2.2e-60 Score=456.02 Aligned_cols=264 Identities=28% Similarity=0.397 Sum_probs=232.0
Q ss_pred ccchhchhHHH-hcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHH
Q 021995 20 LRSSSRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQV 98 (304)
Q Consensus 20 ~~~~~~~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~ 98 (304)
+++.+++++++ +.+|+||+|++.++|+| ++|+++|+++||.|+|+||+|+.+||||++++||+++|++..+++.+
T Consensus 53 ~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d----~iD~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~ 128 (404)
T 1sc6_A 53 LRSRTHLTEDVINAAEKLVAIGAFAIGTN----QVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKA 128 (404)
T ss_dssp ECSSCCBCHHHHHHCSSCCEEEECSSCCT----TBCHHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred EcCCCCCCHHHHhhCCCCcEEEECCcccC----ccCHHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHH
Confidence 57788999887 77899999999999998 55699999999999999999999999999999999999999999999
Q ss_pred HhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEE
Q 021995 99 ISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVV 178 (304)
Q Consensus 99 ~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi 178 (304)
++|.|.+.. ..+.+|+|+|+||||+|.||+.+|+++++|||+|++|||+.... ..++....++++++++||+|+
T Consensus 129 ~~g~W~~~~--~~~~el~gktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~~~~~~~~l~ell~~aDvV~ 202 (404)
T 1sc6_A 129 HRGVGNKLA--AGSFEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP----LGNATQVQHLSDLLNMSDVVS 202 (404)
T ss_dssp HHTCCC-------CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC----CTTCEECSCHHHHHHHCSEEE
T ss_pred HcCCccccC--CCccccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc----cCCceecCCHHHHHhcCCEEE
Confidence 999997643 24679999999999999999999999999999999999975432 113555668999999999999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCC----CCCccCCCCeE
Q 021995 179 VNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPK----DHPWRYMPNQA 254 (304)
Q Consensus 179 ~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~----~~~l~~~~nv~ 254 (304)
+|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|++.||+||||++||++. ++|||.+|||+
T Consensus 203 l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvi 282 (404)
T 1sc6_A 203 LHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVL 282 (404)
T ss_dssp ECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEE
T ss_pred EccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999874 57999999999
Q ss_pred EccCCCcCCHHHHHHHHHHHHHHHHHHHcCCCC-CCCcee
Q 021995 255 MTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDF-PVQNYI 293 (304)
Q Consensus 255 lTPHia~~t~e~~~~~~~~~~~~l~~~~~g~~~-~~~n~~ 293 (304)
+|||+|++|.|+++++...+.+|+.+|++|+++ +.+|.+
T Consensus 283 lTPHi~~~T~ea~~~~~~~~~~nl~~~l~g~~~~~~vn~p 322 (404)
T 1sc6_A 283 LTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNFP 322 (404)
T ss_dssp EECCCSCCSHHHHHHHHHHHHHHHHHHHHHCCCTTBSSSC
T ss_pred ECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCcceeccc
Confidence 999999999999999999999999999997665 555543
No 15
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=2.2e-60 Score=446.69 Aligned_cols=259 Identities=23% Similarity=0.264 Sum_probs=232.2
Q ss_pred ccchhchhHH-H-hcC--CCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhh
Q 021995 20 LRSSSRFSRH-Y-ASS--GSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGH 95 (304)
Q Consensus 20 ~~~~~~~~~~-l-~~~--~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~ 95 (304)
+++.++++++ + +++ ++||+|++.++|+|++ |+++|+++||.|+|+||+++.+||||+++++|++.|++..+.
T Consensus 51 ~~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~d~i----d~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~ 126 (343)
T 2yq5_A 51 LKPLGPVDEEVVYQKLSEYGVKCIGLRIVGFNTI----NFDWTKKYNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFR 126 (343)
T ss_dssp ECCSSCBCCHHHHHHHHHTTCCEEEESSSCCTTB----CSSTTCC--CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred EcCCCCcCHHHHHHhccccCceEEEECceeeccc----chhHHHhCCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHH
Confidence 3456889888 6 555 4699999999999855 588999999999999999999999999999999999999999
Q ss_pred HHHH-hCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcC
Q 021995 96 HQVI-SGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKC 174 (304)
Q Consensus 96 ~~~~-~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~a 174 (304)
+.++ +|.|.+.. ...+++|+|+||||||+|.||+.+|+++++||++|++|||++.+ ..+.++.+. ++++++++|
T Consensus 127 ~~~~~~g~~~w~~-~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~---~~~~~~~~~-~l~ell~~a 201 (343)
T 2yq5_A 127 YRMDHDHDFTWPS-NLISNEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNP---EFEPFLTYT-DFDTVLKEA 201 (343)
T ss_dssp HHHHHHCCCCCCG-GGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCG---GGTTTCEEC-CHHHHHHHC
T ss_pred HHHHHcCCccccc-CCCccccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhh---hhhcccccc-CHHHHHhcC
Confidence 9999 89876532 23578999999999999999999999999999999999997643 122234444 899999999
Q ss_pred CEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCC--CCCC--------
Q 021995 175 DIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP--APKD-------- 244 (304)
Q Consensus 175 DvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep--~~~~-------- 244 (304)
|+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++|| ++.+
T Consensus 202 DvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~ 281 (343)
T 2yq5_A 202 DIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIP 281 (343)
T ss_dssp SEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSC
T ss_pred CEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccccCCCccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999 4555
Q ss_pred ---CCccCCCCeEEccCCCcCCHHHHHHHHHHHHHHHHHHHcCCCC
Q 021995 245 ---HPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDF 287 (304)
Q Consensus 245 ---~~l~~~~nv~lTPHia~~t~e~~~~~~~~~~~~l~~~~~g~~~ 287 (304)
+|||.+|||++|||+|++|.++++++...+.+||.+|++|+++
T Consensus 282 ~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~ni~~~l~g~~~ 327 (343)
T 2yq5_A 282 EDYKTLAKMPNVVITPHSAFYTETSIRNMVQICLTDQLTIAKGGRP 327 (343)
T ss_dssp HHHHHHTTCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cchhHHhcCCCEEECCccccchHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 4899999999999999999999999999999999999999987
No 16
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=4.2e-59 Score=437.47 Aligned_cols=262 Identities=21% Similarity=0.297 Sum_probs=235.3
Q ss_pred cchhchhHHH-hcCCC--cEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHH
Q 021995 21 RSSSRFSRHY-ASSGS--KKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQ 97 (304)
Q Consensus 21 ~~~~~~~~~l-~~~~~--lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~ 97 (304)
.+.+++++++ +++|+ ||+|++.++|+|+ +|+++|+++||.|+|+||+++.+||||++++||++.|++..+++.
T Consensus 53 ~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~d~----id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~ 128 (333)
T 1j4a_A 53 YQQLDYIAETLQALADNGITKMSLRNVGVDN----IDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEK 128 (333)
T ss_dssp CCSSCBCHHHHHHHHHTTCCEEEESSSCCTT----BCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred cCCCCCCHHHHHhccccCCeEEEECCccccc----ccHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHH
Confidence 3456788776 66776 9999999999985 459999999999999999999999999999999999999999999
Q ss_pred HHhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEE
Q 021995 98 VISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIV 177 (304)
Q Consensus 98 ~~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV 177 (304)
+++|.|.+.. ..+.++.|++|||||+|.||+.+|+++++||++|++||+++.+. +.+ .+...+++++++++||+|
T Consensus 129 ~~~g~w~~~~--~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~-~~~~~~~l~ell~~aDvV 203 (333)
T 1j4a_A 129 VARHDLRWAP--TIGREVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--LEK-KGYYVDSLDDLYKQADVI 203 (333)
T ss_dssp HHTTBCCCTT--CCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHH-TTCBCSCHHHHHHHCSEE
T ss_pred HHcCCCccCC--cccccCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--HHh-hCeecCCHHHHHhhCCEE
Confidence 9999996532 34678999999999999999999999999999999999976432 233 244445899999999999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCC--CCCCC----------
Q 021995 178 VVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQP--APKDH---------- 245 (304)
Q Consensus 178 i~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep--~~~~~---------- 245 (304)
++|+|++++|+++++++.|+.||+|++|||++||+++|+++|+++|++|+|.||+||||++|| +|.++
T Consensus 204 ~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~ 283 (333)
T 1j4a_A 204 SLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARL 283 (333)
T ss_dssp EECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHH
T ss_pred EEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCCCCCCccccccccccCCccch
Confidence 999999999999999999999999999999999999999999999999999999999999999 45544
Q ss_pred -CccCCCCeEEccCCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCcee
Q 021995 246 -PWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYI 293 (304)
Q Consensus 246 -~l~~~~nv~lTPHia~~t~e~~~~~~~~~~~~l~~~~~g~~~~~~n~~ 293 (304)
|||.+|||++|||+|++|.+++.++...+.+|+.+|++|+++ .|.+
T Consensus 284 ~~L~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~~~g~~~--~~~v 330 (333)
T 1j4a_A 284 ADLIARPNVLVTPKTAFYTTHAVRNMVVKAFDNNLELVEGKEA--ETPV 330 (333)
T ss_dssp HHHHHCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTTCCC--SSBC
T ss_pred hhHHhCCCEEECCccccCHHHHHHHHHHHHHHHHHHHHcCCCC--Cccc
Confidence 599999999999999999999999999999999999999886 4544
No 17
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-58 Score=434.21 Aligned_cols=258 Identities=29% Similarity=0.465 Sum_probs=234.5
Q ss_pred cchhchhHHH-hcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHH
Q 021995 21 RSSSRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVI 99 (304)
Q Consensus 21 ~~~~~~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~ 99 (304)
++.+++++++ +++|+||+|++.++|+|+ +|+++|+++||.|+|+||+++.+||||+++++|++.|++..+.+.++
T Consensus 74 ~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~----id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~ 149 (335)
T 2g76_A 74 RSATKVTADVINAAEKLQVVGRAGTGVDN----VDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMK 149 (335)
T ss_dssp CSSSCBCHHHHHHCSSCCEEEESSSSCTT----BCHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred cCCCCCCHHHHhhCCCCcEEEECCCCcch----hChHHHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 4556788886 779999999999999985 56999999999999999999999999999999999999999999999
Q ss_pred hCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEE
Q 021995 100 SGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVV 179 (304)
Q Consensus 100 ~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~ 179 (304)
+|.|.+.. ..+.+|.|++|||||+|.||+.+|+++++||++|++||++..+ +.+...|+.. .++++++++||+|++
T Consensus 150 ~g~W~~~~--~~~~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~~l~ell~~aDvV~l 225 (335)
T 2g76_A 150 DGKWERKK--FMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP-EVSASFGVQQ-LPLEEIWPLCDFITV 225 (335)
T ss_dssp TTCCCTGG--GCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHHTTCEE-CCHHHHGGGCSEEEE
T ss_pred cCCCCccC--CCCcCCCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCcee-CCHHHHHhcCCEEEE
Confidence 99997542 2467899999999999999999999999999999999997643 4556677765 489999999999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEEccCC
Q 021995 180 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHV 259 (304)
Q Consensus 180 ~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~lTPHi 259 (304)
|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||+.|| +.++|||.+||+++|||+
T Consensus 226 ~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~lDV~~~EP-~~~~~L~~~~nvilTPH~ 304 (335)
T 2g76_A 226 HTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP-PRDRALVDHENVISCPHL 304 (335)
T ss_dssp CCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSS-CSCCHHHHSTTEEECSSC
T ss_pred ecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEEeecCCCC-CCCchHHhCCCEEECCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999 567999999999999999
Q ss_pred CcCCHHHHHHHHHHHHHHHHHHHcCCCC
Q 021995 260 SGTTIDAQLRYAAGVKDMLDRYFKGEDF 287 (304)
Q Consensus 260 a~~t~e~~~~~~~~~~~~l~~~~~g~~~ 287 (304)
+++|.+++.++...+.+|+.+|++|+++
T Consensus 305 ~~~t~e~~~~~~~~~~~nl~~~~~g~~~ 332 (335)
T 2g76_A 305 GASTKEAQSRCGEEIAVQFVDMVKGKSL 332 (335)
T ss_dssp TTCBHHHHHHHHHHHHHHHHHHC-----
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999986
No 18
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=3.8e-59 Score=434.14 Aligned_cols=258 Identities=21% Similarity=0.290 Sum_probs=226.3
Q ss_pred hHHH-hcCCCcEEEEEeeecccCCCCccc-HHH---HHhCCcEEEEcCCCC-hhHHHHHHHHHHHHHHhCcchhhHHHHh
Q 021995 27 SRHY-ASSGSKKIVGVFYKGNEYASMNPN-FLA---AAAAGLTVAEVTGSN-VVSVAEDELMRILILVRNFLPGHHQVIS 100 (304)
Q Consensus 27 ~~~l-~~~~~lk~i~~~~~G~d~~~~~~d-~~~---~~~~gI~v~n~~g~~-~~~vAE~al~~~L~~~R~~~~~~~~~~~ 100 (304)
++++ +. |+||+|++.++|+|++. | +++ +.++||.|+|+++++ +.+||||+++++|++.|++..+.+.+++
T Consensus 51 ~~~~l~~-~~Lk~I~~~~aG~d~i~---d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~ 126 (315)
T 3pp8_A 51 PVEMLAG-RRLKAVFVLGAGVDAIL---SKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQ 126 (315)
T ss_dssp CHHHHTT-CCCSEEEESSSCCHHHH---HHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHT
T ss_pred CHHHhCC-CCceEEEECCEeccccc---chhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHh
Confidence 4554 66 99999999999998531 4 665 678999999999875 7999999999999999999999999999
Q ss_pred CCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEc
Q 021995 101 GEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVN 180 (304)
Q Consensus 101 ~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~ 180 (304)
|.|... .+++++|+||||||+|.||+.+|++|++||++|++|||++...+..... ....++++++++||+|++|
T Consensus 127 g~W~~~----~~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~--~~~~~l~ell~~aDiV~l~ 200 (315)
T 3pp8_A 127 ALWKPL----PEYTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESY--VGREELRAFLNQTRVLINL 200 (315)
T ss_dssp TCCCCC----CCCCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEE--ESHHHHHHHHHTCSEEEEC
T ss_pred cccCCC----CCCCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhh--cccCCHHHHHhhCCEEEEe
Confidence 999754 3578999999999999999999999999999999999976543221111 1125799999999999999
Q ss_pred CCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEEccCCC
Q 021995 181 TPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVS 260 (304)
Q Consensus 181 ~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~lTPHia 260 (304)
+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||+|.++|||.+|||++|||+|
T Consensus 201 ~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia 280 (315)
T 3pp8_A 201 LPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMTPHIA 280 (315)
T ss_dssp CCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCTTEEECSSCS
T ss_pred cCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCCCEEECCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCceeecCCc
Q 021995 261 GTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGE 298 (304)
Q Consensus 261 ~~t~e~~~~~~~~~~~~l~~~~~g~~~~~~n~~~~~~~ 298 (304)
++|.+ +++...+.+||.+|++|+++ .|.|+.+..
T Consensus 281 ~~t~~--~~~~~~~~~ni~~~~~G~~~--~~~V~~~~G 314 (315)
T 3pp8_A 281 AVTRP--AEAIDYISRTITQLEKGEPV--TGQVDRARG 314 (315)
T ss_dssp SCCCH--HHHHHHHHHHHHHHHHTCCC--CCBCCCC--
T ss_pred cccHH--HHHHHHHHHHHHHHHcCCCC--CceECcccC
Confidence 99986 57888999999999999987 576666543
No 19
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=5.6e-58 Score=425.37 Aligned_cols=255 Identities=31% Similarity=0.498 Sum_probs=236.5
Q ss_pred chhchhHHH-hcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHh
Q 021995 22 SSSRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVIS 100 (304)
Q Consensus 22 ~~~~~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~ 100 (304)
+.+++++++ +++|+||+|++.++|+|+ +|+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++
T Consensus 52 ~~~~~~~~~l~~~~~Lk~I~~~~~G~d~----id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~ 127 (307)
T 1wwk_A 52 SKPKVTRRVIESAPKLKVIARAGVGLDN----IDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMRE 127 (307)
T ss_dssp SCSCBCHHHHTTCTTCCEEEESSSCCTT----BCHHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTT
T ss_pred CCCCCCHHHHhhCCCCeEEEECCccccc----cCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHc
Confidence 344688776 778999999999999985 459999999999999999999999999999999999999999999999
Q ss_pred CCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEc
Q 021995 101 GEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVN 180 (304)
Q Consensus 101 ~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~ 180 (304)
|.|.+.. ..+.+|.|++|||||+|.||+.+|+++++||++|++||+++.+ +.+.+.|+... ++++++++||+|++|
T Consensus 128 g~w~~~~--~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~-~l~ell~~aDvV~l~ 203 (307)
T 1wwk_A 128 GVWAKKE--AMGIELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKFV-DLETLLKESDVVTIH 203 (307)
T ss_dssp TCCCTTT--CCBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEEC-CHHHHHHHCSEEEEC
T ss_pred CCCCccC--cCCcccCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCcccc-CHHHHHhhCCEEEEe
Confidence 9997522 2467999999999999999999999999999999999997754 45566777664 899999999999999
Q ss_pred CCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEEccCCC
Q 021995 181 TPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVS 260 (304)
Q Consensus 181 ~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~lTPHia 260 (304)
+|++++|+++++++.|+.||+|++|||++||+++|+++|.++|++|+|.||+||||++||++.++|||.+||+++|||++
T Consensus 204 ~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~ 283 (307)
T 1wwk_A 204 VPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIG 283 (307)
T ss_dssp CCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECSSCT
T ss_pred cCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCEEECCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHcC
Q 021995 261 GTTIDAQLRYAAGVKDMLDRYFKG 284 (304)
Q Consensus 261 ~~t~e~~~~~~~~~~~~l~~~~~g 284 (304)
++|.+++.++...+.+|+.+|++|
T Consensus 284 ~~t~~~~~~~~~~~~~nl~~~~~g 307 (307)
T 1wwk_A 284 ASTVEAQERAGVEVAEKVVKILKG 307 (307)
T ss_dssp TCBHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCcHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999976
No 20
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.1e-58 Score=434.65 Aligned_cols=263 Identities=21% Similarity=0.337 Sum_probs=235.2
Q ss_pred cchhchhHHH-hcCCC--cEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHH
Q 021995 21 RSSSRFSRHY-ASSGS--KKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQ 97 (304)
Q Consensus 21 ~~~~~~~~~l-~~~~~--lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~ 97 (304)
++.+++++++ +++|+ ||+|++.++|+|+ +|+++|+++||.|+|+||+++.+||||++++||++.|++..+++.
T Consensus 51 ~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~d~----id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~ 126 (333)
T 1dxy_A 51 LQTTPYAAGVFEKMHAYGIKFLTIRNVGTDN----IDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQ 126 (333)
T ss_dssp CCSSCBCHHHHHHHHHTTCCEEEESSSCCTT----BCHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred cCCCCCCHHHHHhCcccCceEEEEcCcccCc----cCHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHH
Confidence 4457888886 66777 9999999999985 569999999999999999999999999999999999999999999
Q ss_pred HHhCCccc-ccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCE
Q 021995 98 VISGEWNV-AGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDI 176 (304)
Q Consensus 98 ~~~~~w~~-~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDv 176 (304)
+++|.|.+ .. ..+.+|.|++|||||+|.||+.+|+++++||++|++||++..+. ..+ .+.. .++++++++||+
T Consensus 127 ~~~g~w~~~~~--~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~-~~~~-~~l~ell~~aDv 200 (333)
T 1dxy_A 127 LQAGDYEKAGT--FIGKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--DHP-DFDY-VSLEDLFKQSDV 200 (333)
T ss_dssp HHTTCHHHHTC--CCCCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--CCT-TCEE-CCHHHHHHHCSE
T ss_pred HHcCCcccccC--CCccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--hHh-cccc-CCHHHHHhcCCE
Confidence 99999964 22 24679999999999999999999999999999999999976433 122 2343 489999999999
Q ss_pred EEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCC--C--------CC--
Q 021995 177 VVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA--P--------KD-- 244 (304)
Q Consensus 177 Vi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~--~--------~~-- 244 (304)
|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||+ + .+
T Consensus 201 V~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~ 280 (333)
T 1dxy_A 201 IDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPL 280 (333)
T ss_dssp EEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHH
T ss_pred EEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999983 1 12
Q ss_pred -CCccCCCCeEEccCCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCceeec
Q 021995 245 -HPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVK 295 (304)
Q Consensus 245 -~~l~~~~nv~lTPHia~~t~e~~~~~~~~~~~~l~~~~~g~~~~~~n~~~~ 295 (304)
+|||.+|||++|||+|++|.+++.++...+.+|+.+|++|+++ .|.+++
T Consensus 281 ~~pL~~~~nvi~TPHia~~t~e~~~~~~~~~~~nl~~~~~g~~~--~~~v~~ 330 (333)
T 1dxy_A 281 WDELLGMPNVVLSPHIAYYTETAVHNMVYFSLQHLVDFLTKGET--STEVTG 330 (333)
T ss_dssp HHHHHTCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHHHSCC--TTEECC
T ss_pred hhHHhcCCCEEECCccccChHHHHHHHHHHHHHHHHHHHcCCCC--CceeCC
Confidence 5899999999999999999999999999999999999999876 455554
No 21
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=2.8e-57 Score=422.95 Aligned_cols=260 Identities=24% Similarity=0.353 Sum_probs=238.4
Q ss_pred cchhchhHHH-hcCCC-cEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHH
Q 021995 21 RSSSRFSRHY-ASSGS-KKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQV 98 (304)
Q Consensus 21 ~~~~~~~~~l-~~~~~-lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~ 98 (304)
++.+++++++ +++|+ ||||++.++|+|+ +|+++|+++||.|+|+||+++.+||||++++||++.|++..+.+.+
T Consensus 51 ~~~~~~~~~~l~~~~~~Lk~I~~~~~G~d~----id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~ 126 (320)
T 1gdh_A 51 TLNEKCRKEVIDRIPENIKCISTYSIGFDH----IDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMI 126 (320)
T ss_dssp ETTSCBCHHHHHHSCTTCCEEEEESSCCTT----BCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred CCCCCCCHHHHHhCCccceEEEECCccccc----ccHHHHHhCCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 3446888876 77899 9999999999985 5699999999999999999999999999999999999999999999
Q ss_pred HhCCccccc-ccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcC-CCCChhHHHhcCceecCCHHhhcCcCCE
Q 021995 99 ISGEWNVAG-VAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDR-VKMDPQLEKETGAKFEEDLDTMLPKCDI 176 (304)
Q Consensus 99 ~~~~w~~~~-~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr-~~~~~~~~~~~g~~~~~~l~ell~~aDv 176 (304)
++|.|.... ....+.++.|++|||||+|.||+.+|+++++||++|++||+ ++.+ ..+.+.|+....++++++++||+
T Consensus 127 ~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~~g~~~~~~l~ell~~aDv 205 (320)
T 1gdh_A 127 RTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASS-SDEASYQATFHDSLDSLLSVSQF 205 (320)
T ss_dssp HTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHHHHTCEECSSHHHHHHHCSE
T ss_pred HcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhhhcCcEEcCCHHHHHhhCCE
Confidence 999996321 11246789999999999999999999999999999999999 7644 44556787766689999999999
Q ss_pred EEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEEc
Q 021995 177 VVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMT 256 (304)
Q Consensus 177 Vi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~lT 256 (304)
|++|+|.+++|+++++++.++.||+|++|||++||+++|+++|.++|++|+|.||++|||+.|| +.++|||.+||+++|
T Consensus 206 Vil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP-~~~~~L~~~~nvilt 284 (320)
T 1gdh_A 206 FSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEP-NINEGYYDLPNTFLF 284 (320)
T ss_dssp EEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT-SCCTTGGGCTTEEEC
T ss_pred EEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCC-CCCChhhhCCCEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999999 889999999999999
Q ss_pred cCCCcCCHHHHHHHHHHHHHHHHHHHcCCCC
Q 021995 257 PHVSGTTIDAQLRYAAGVKDMLDRYFKGEDF 287 (304)
Q Consensus 257 PHia~~t~e~~~~~~~~~~~~l~~~~~g~~~ 287 (304)
||++++|.+++.++...+ +|+.+|++|+++
T Consensus 285 PH~~~~t~~~~~~~~~~~-~nl~~~~~g~~~ 314 (320)
T 1gdh_A 285 PHIGSAATQAREDMAHQA-NDLIDALFGGAD 314 (320)
T ss_dssp SSCTTCBHHHHHHHHHHH-HHHHHHHHTTSC
T ss_pred CcCCcCcHHHHHHHHHHH-HHHHHHHcCCCC
Confidence 999999999999999999 999999999886
No 22
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=3.7e-57 Score=425.88 Aligned_cols=270 Identities=24% Similarity=0.358 Sum_probs=242.6
Q ss_pred ccchhchhHHH-hcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHH
Q 021995 20 LRSSSRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQV 98 (304)
Q Consensus 20 ~~~~~~~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~ 98 (304)
+...+++++++ +++|+||+|++.++|+|+ +|+++|+++||.|+|+||+++.+||||++++||++.|++..+.+.+
T Consensus 69 ~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~----id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~ 144 (347)
T 1mx3_A 69 MYHTITLTREDLEKFKALRIIVRIGSGFDN----IDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQAL 144 (347)
T ss_dssp ECSSSCBCHHHHTTCSSCCEEEESSSCCTT----BCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred EeCCCCCCHHHHhhCCCCCEEEEcccccCc----ccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 44556788776 778999999999999984 5699999999999999999999999999999999999999999999
Q ss_pred HhCCcccccc-----cccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCc
Q 021995 99 ISGEWNVAGV-----AYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPK 173 (304)
Q Consensus 99 ~~~~w~~~~~-----~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~ 173 (304)
++|.|..... ...+.+|.|++|||||+|.||+.+|++|++||++|++||++..+ ......|+..+.++++++++
T Consensus 145 ~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~~~l~ell~~ 223 (347)
T 1mx3_A 145 REGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSD-GVERALGLQRVSTLQDLLFH 223 (347)
T ss_dssp HTTCCCCSHHHHHHHTTTCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCT-THHHHHTCEECSSHHHHHHH
T ss_pred HcCCcccccccccccccCccCCCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-hhHhhcCCeecCCHHHHHhc
Confidence 9999953210 01125899999999999999999999999999999999997643 34456677766789999999
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCC-CCCCccCCCC
Q 021995 174 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAP-KDHPWRYMPN 252 (304)
Q Consensus 174 aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~-~~~~l~~~~n 252 (304)
||+|++|+|++++|+++++++.|+.||+|++|||++||+++|+++|+++|++|+|.||++|||+.||++ .++||+.+||
T Consensus 224 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~n 303 (347)
T 1mx3_A 224 SDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPN 303 (347)
T ss_dssp CSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSS
T ss_pred CCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999987 4789999999
Q ss_pred eEEccCCCcCCHHHHHHHHHHHHHHHHHHHcCCCC-CCCceee
Q 021995 253 QAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDF-PVQNYIV 294 (304)
Q Consensus 253 v~lTPHia~~t~e~~~~~~~~~~~~l~~~~~g~~~-~~~n~~~ 294 (304)
+++|||++++|.+++.++...+.+|+.+|++|+++ +..|.++
T Consensus 304 vi~tPHia~~t~~~~~~~~~~~~~ni~~~~~g~~~~~l~~~v~ 346 (347)
T 1mx3_A 304 LICTPHAAWYSEQASIEMREEAAREIRRAITGRIPDSLKNCVN 346 (347)
T ss_dssp EEECSSCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTCSSBCC
T ss_pred EEEEchHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccCCCCC
Confidence 99999999999999999999999999999999876 3456543
No 23
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=4.3e-58 Score=430.28 Aligned_cols=258 Identities=24% Similarity=0.330 Sum_probs=232.3
Q ss_pred cchhchhHHH-hcCCC--cEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHH
Q 021995 21 RSSSRFSRHY-ASSGS--KKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQ 97 (304)
Q Consensus 21 ~~~~~~~~~l-~~~~~--lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~ 97 (304)
++.+++++++ +++|+ ||+|++.++|+|+ +|+++|+++||.|+|+||+++.+||||++++||++.|++..+.+.
T Consensus 52 ~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~d~----id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~ 127 (331)
T 1xdw_A 52 RGNCFANKQNLDIYKKLGVKYILTRTAGTDH----IDKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSR 127 (331)
T ss_dssp CTTCCBCHHHHHHHHHHTCCEEEESSSCCTT----BCHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred eCCCCCCHHHHhhCcccCceEEEEccccccc----cCHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 3457888886 66777 9999999999985 569999999999999999999999999999999999999999999
Q ss_pred HHhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEE
Q 021995 98 VISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIV 177 (304)
Q Consensus 98 ~~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV 177 (304)
+++|.|.+.. ...+.++.|++|||||+|.||+.+|+++++||++|++||++..+. ..+ .+.. .++++++++||+|
T Consensus 128 ~~~g~w~~~~-~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~-~~~~-~~l~ell~~aDvV 202 (331)
T 1xdw_A 128 TAKKNFKVDA-FMFSKEVRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--IED-YCTQ-VSLDEVLEKSDII 202 (331)
T ss_dssp HTTTCCCCCS-TTCCCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--CTT-TCEE-CCHHHHHHHCSEE
T ss_pred HHcCCCcccc-CcCccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--HHh-cccc-CCHHHHHhhCCEE
Confidence 9999996411 124678999999999999999999999999999999999976443 122 2343 4899999999999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCC--CCC-------C---
Q 021995 178 VVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPA--PKD-------H--- 245 (304)
Q Consensus 178 i~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~--~~~-------~--- 245 (304)
++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||+ +.+ +
T Consensus 203 ~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~ 282 (331)
T 1xdw_A 203 TIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLF 282 (331)
T ss_dssp EECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHH
T ss_pred EEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCCCCCCcccccccccccCccch
Confidence 9999999999999999999999999999999999999999999999999999999999999994 332 3
Q ss_pred -CccCC-CCeEEccCCCcCCHHHHHHHHHHHHHHHHHHHcCCCC
Q 021995 246 -PWRYM-PNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDF 287 (304)
Q Consensus 246 -~l~~~-~nv~lTPHia~~t~e~~~~~~~~~~~~l~~~~~g~~~ 287 (304)
|||.+ |||++|||+|++|.+++.++...+.+||.+|++|+++
T Consensus 283 ~~L~~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~~~g~~~ 326 (331)
T 1xdw_A 283 EKLVDLYPRVLITPHLGSYTDEAVKNMVEVSYQNLKDLAETGDC 326 (331)
T ss_dssp HHHHHTTTTEEECCSCTTCSHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHhCCCCEEEcCccccChHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 79999 9999999999999999999999999999999999876
No 24
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.8e-57 Score=422.99 Aligned_cols=256 Identities=21% Similarity=0.304 Sum_probs=237.4
Q ss_pred cchhchhHHH-hcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHH
Q 021995 21 RSSSRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVI 99 (304)
Q Consensus 21 ~~~~~~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~ 99 (304)
++.+++++++ +++|+||+|++.++|+|+ +|+++|.++||.|+|+||+++.+||||++++||++.|++..+++.++
T Consensus 53 ~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~----id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~ 128 (313)
T 2ekl_A 53 RSRTKVTKDVIEKGKKLKIIARAGIGLDN----IDTEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAK 128 (313)
T ss_dssp CSSSCBCHHHHHHCTTCCEEEECSSCCTT----BCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred cCCCCCCHHHHhhCCCCeEEEEcCCCCCc----cCHHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 3456788876 788999999999999985 45999999999999999999999999999999999999999999999
Q ss_pred hCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEE
Q 021995 100 SGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVV 179 (304)
Q Consensus 100 ~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~ 179 (304)
+|.|.. ..+.++.|++|||||+|.||+.+|++++++|++|++||+++.+ ..+.+.|+... ++++++++||+|++
T Consensus 129 ~g~w~~----~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~-~l~ell~~aDvVvl 202 (313)
T 2ekl_A 129 SGIFKK----IEGLELAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIR-EKAEKINAKAV-SLEELLKNSDVISL 202 (313)
T ss_dssp TTCCCC----CCCCCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEEC-CHHHHHHHCSEEEE
T ss_pred cCCCCC----CCCCCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcch-hHHHhcCceec-CHHHHHhhCCEEEE
Confidence 999962 3467899999999999999999999999999999999997754 34556777754 89999999999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCC---CccCCCCeEEc
Q 021995 180 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDH---PWRYMPNQAMT 256 (304)
Q Consensus 180 ~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~---~l~~~~nv~lT 256 (304)
|+|.+++|+++++++.++.||+|++|||++||+++|+++|.++|++|++.||+||||++||++ ++ |||.+||+++|
T Consensus 203 ~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~-~~~~~~L~~~~nvilt 281 (313)
T 2ekl_A 203 HVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEPPK-EEWELELLKHERVIVT 281 (313)
T ss_dssp CCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSSCC-SHHHHHHHHSTTEEEC
T ss_pred eccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCCCC-CcccchHhhCCCEEEC
Confidence 999999999999999999999999999999999999999999999999999999999999988 56 99999999999
Q ss_pred cCCCcCCHHHHHHHHHHHHHHHHHHHcCCCC
Q 021995 257 PHVSGTTIDAQLRYAAGVKDMLDRYFKGEDF 287 (304)
Q Consensus 257 PHia~~t~e~~~~~~~~~~~~l~~~~~g~~~ 287 (304)
||++++|.++++++...+.+|+.+|++|+|+
T Consensus 282 PH~~~~t~~~~~~~~~~~~~n~~~~~~g~~l 312 (313)
T 2ekl_A 282 THIGAQTKEAQKRVAEMTTQNLLNAMKELGM 312 (313)
T ss_dssp CSCTTCSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CccCcCcHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999986
No 25
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=7.2e-57 Score=418.54 Aligned_cols=255 Identities=29% Similarity=0.480 Sum_probs=234.2
Q ss_pred cchhchhHHH-hcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHH
Q 021995 21 RSSSRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVI 99 (304)
Q Consensus 21 ~~~~~~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~ 99 (304)
+..+++++++ +++|+||+|++.++|+|+ +|+++|+++||.|+|+||+++.+||||++++||++.|++..+++.++
T Consensus 50 ~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~----id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~ 125 (311)
T 2cuk_A 50 TVEDRIDAEVMDRAKGLKVIACYSVGVDH----VDLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYAR 125 (311)
T ss_dssp CTTSCBCHHHHHHSTTCCEEECSSSCCTT----BCHHHHHTTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred cCCCCCCHHHHhhCCCCeEEEECCcCccc----cCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHH
Confidence 3445788876 778999999999999985 45999999999999999999999999999999999999999999999
Q ss_pred hCCccccc-ccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEE
Q 021995 100 SGEWNVAG-VAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVV 178 (304)
Q Consensus 100 ~~~w~~~~-~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi 178 (304)
+|.|.... ....+.++.|++|||||+|.||+.+|+++++||++|++|||+..+.. +. ..++++++++||+|+
T Consensus 126 ~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~------~~-~~~l~ell~~aDvV~ 198 (311)
T 2cuk_A 126 DGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP------YP-FLSLEELLKEADVVS 198 (311)
T ss_dssp TTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS------SC-BCCHHHHHHHCSEEE
T ss_pred cCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc------cc-cCCHHHHHhhCCEEE
Confidence 99996321 11236789999999999999999999999999999999999775432 22 458999999999999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEEccC
Q 021995 179 VNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPH 258 (304)
Q Consensus 179 ~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~lTPH 258 (304)
+|+|.+++|+++++++.++.||+|+++||+|||+++|+++|.++|+ |++.||++|||++||++.++|||.+||+++|||
T Consensus 199 l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh 277 (311)
T 2cuk_A 199 LHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPH 277 (311)
T ss_dssp ECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEEECCS
T ss_pred EeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEEECCc
Confidence 9999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHcCCCC
Q 021995 259 VSGTTIDAQLRYAAGVKDMLDRYFKGEDF 287 (304)
Q Consensus 259 ia~~t~e~~~~~~~~~~~~l~~~~~g~~~ 287 (304)
++++|.+++.++...+.+|+.+|++|+++
T Consensus 278 ~~~~t~~~~~~~~~~~~~nl~~~~~g~~~ 306 (311)
T 2cuk_A 278 IGSAGRTTRERMAEVAVENLLAVLEGREP 306 (311)
T ss_dssp CTTCBHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999876
No 26
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=1.6e-56 Score=419.47 Aligned_cols=256 Identities=23% Similarity=0.373 Sum_probs=236.1
Q ss_pred cchhchhHHH-hcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHH
Q 021995 21 RSSSRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVI 99 (304)
Q Consensus 21 ~~~~~~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~ 99 (304)
++.+++++++ +++|+||+|++.++|+|+ +|+++|+++||.|+|+||+++.+||||++++||++.|++..+.+.++
T Consensus 72 ~~~~~~~~~~l~~~p~Lk~I~~~~~G~d~----id~~~~~~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~ 147 (333)
T 3ba1_A 72 NSNAGADAELIDALPKLEIVSSFSVGLDK----VDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVR 147 (333)
T ss_dssp CSSSCBCHHHHHHCTTCCEEEESSSCCTT----BCHHHHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred cCCCCCCHHHHhhCCCCcEEEEcCccccc----cCHHHHHhCCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 4556788876 779999999999999985 56999999999999999999999999999999999999999999999
Q ss_pred hCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEE
Q 021995 100 SGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVV 179 (304)
Q Consensus 100 ~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~ 179 (304)
+|.|.+... ..+.+|.|++|||||+|.||+.+|++++++|++|++||+++.... ++....++++++++||+|++
T Consensus 148 ~g~w~~~~~-~~~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~-----g~~~~~~l~ell~~aDvVil 221 (333)
T 3ba1_A 148 RGAWKFGDF-KLTTKFSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT-----NYTYYGSVVELASNSDILVV 221 (333)
T ss_dssp TTGGGGCCC-CCCCCCTTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC-----CSEEESCHHHHHHTCSEEEE
T ss_pred cCCCCcccc-ccccccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc-----CceecCCHHHHHhcCCEEEE
Confidence 999975321 236789999999999999999999999999999999999764321 55556789999999999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEEccCC
Q 021995 180 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHV 259 (304)
Q Consensus 180 ~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~lTPHi 259 (304)
|+|.+++|+++++++.++.||++++|||++||.++|+++|.++|++|++.||++|||++||++. +|||.+|||++|||+
T Consensus 222 ~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~-~~L~~~~nviltPH~ 300 (333)
T 3ba1_A 222 ACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFEREPEVP-EKLFGLENVVLLPHV 300 (333)
T ss_dssp CSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCTTTTCCC-GGGGGCTTEEECSSC
T ss_pred ecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCCCCCCCc-chhhcCCCEEECCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999876 899999999999999
Q ss_pred CcCCHHHHHHHHHHHHHHHHHHHcCCCC
Q 021995 260 SGTTIDAQLRYAAGVKDMLDRYFKGEDF 287 (304)
Q Consensus 260 a~~t~e~~~~~~~~~~~~l~~~~~g~~~ 287 (304)
++.|.+++.++...+.+|+.+|++|+++
T Consensus 301 ~~~t~e~~~~~~~~~~~nl~~~~~g~~~ 328 (333)
T 3ba1_A 301 GSGTVETRKVMADLVVGNLEAHFSGKPL 328 (333)
T ss_dssp TTCSHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999886
No 27
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=6.5e-57 Score=417.34 Aligned_cols=257 Identities=21% Similarity=0.283 Sum_probs=232.3
Q ss_pred HHHhcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCccccc
Q 021995 28 RHYASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAG 107 (304)
Q Consensus 28 ~~l~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~ 107 (304)
+.++++|+||+|++.++|+|++| +++ .++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|....
T Consensus 43 ~~l~~~~~Lk~I~~~~~G~d~id----~~~-~~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~ 117 (303)
T 1qp8_A 43 EELAKMPRLKFIQVVTAGLDHLP----WES-IPPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDV 117 (303)
T ss_dssp HHHHHCTTCCCEEBSSSCCTTSC----CTT-SCTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCS
T ss_pred HHHhhCCCCcEEEECCcCccccc----HHH-HhcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCC
Confidence 55688999999999999999764 555 4799999999999999999999999999999999999999999996431
Q ss_pred ccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhh
Q 021995 108 VAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKT 187 (304)
Q Consensus 108 ~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t 187 (304)
...+|.|++|||||+|.||+.+|++|++||++|++|||++. .. +.....++++++++||+|++|+|++++|
T Consensus 118 ---~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~-~~-----~~~~~~~l~ell~~aDvV~l~~P~~~~t 188 (303)
T 1qp8_A 118 ---EIPLIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK-EG-----PWRFTNSLEEALREARAAVCALPLNKHT 188 (303)
T ss_dssp ---CCCCCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC-CS-----SSCCBSCSHHHHTTCSEEEECCCCSTTT
T ss_pred ---CCCCCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc-cc-----CcccCCCHHHHHhhCCEEEEeCcCchHH
Confidence 23489999999999999999999999999999999999764 21 3444568999999999999999999999
Q ss_pred hccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecC-CCCCCCCCCCccCCCCeEEccCCCcC--CH
Q 021995 188 RGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVW-NPQPAPKDHPWRYMPNQAMTPHVSGT--TI 264 (304)
Q Consensus 188 ~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~-~~ep~~~~~~l~~~~nv~lTPHia~~--t~ 264 (304)
+++++++.|+.||+|++|||+|||+++|+++|.++|++|+|.||++||| ++||++.++|||.+||+++|||++++ |.
T Consensus 189 ~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~nviltPH~~~~~~t~ 268 (303)
T 1qp8_A 189 RGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATPWVAGGYGNE 268 (303)
T ss_dssp TTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEECCSCSSSSSCH
T ss_pred HHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChhhcCCCEEECCCcCCCCCCH
Confidence 9999999999999999999999999999999999999999999999999 88999999999999999999999998 99
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCceeecCCccCC
Q 021995 265 DAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAP 301 (304)
Q Consensus 265 e~~~~~~~~~~~~l~~~~~g~~~~~~n~~~~~~~~~~ 301 (304)
++++++...+.+||.+|++|+++ .|.++.+ .|++
T Consensus 269 e~~~~~~~~~~~nl~~~~~g~~~--~~~v~~~-~y~~ 302 (303)
T 1qp8_A 269 RVWRQMVMEAVRNLITYATGGRP--RNIAKRE-DYIG 302 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCC--SCBCCGG-GTC-
T ss_pred HHHHHHHHHHHHHHHHHHcCCCC--CceeCHH-HcCC
Confidence 99999999999999999999876 5666555 5543
No 28
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=2.8e-55 Score=413.80 Aligned_cols=266 Identities=23% Similarity=0.298 Sum_probs=240.2
Q ss_pred hhchhHHH-hcCC-CcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHh
Q 021995 23 SSRFSRHY-ASSG-SKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVIS 100 (304)
Q Consensus 23 ~~~~~~~l-~~~~-~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~ 100 (304)
.+++++++ +++| +||+|++.++|+| ++|+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++
T Consensus 66 ~~~~~~~~l~~~~~~Lk~I~~~~~G~d----~id~~~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~ 141 (348)
T 2w2k_A 66 SYPWNADLISHLPSSLKVFAAAGAGFD----WLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAART 141 (348)
T ss_dssp GCCBCHHHHTTSCTTCCEEEESSSCCT----TBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTT
T ss_pred cCCCCHHHHHhcccCceEEEECCcccc----ccCHHHHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHc
Confidence 45788887 7777 6999999999998 4569999999999999999999999999999999999999999999999
Q ss_pred CC---ccccc--ccccccccCCCEEEEEeeChhhHHHHHHhc-cCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcC
Q 021995 101 GE---WNVAG--VAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKC 174 (304)
Q Consensus 101 ~~---w~~~~--~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~-~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~a 174 (304)
|. |.... ....+.+|.|++|||||+|.||+.+|++++ +||++|++||+++.+.+.+.+.|+....++++++++|
T Consensus 142 g~~~~w~~~~~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~a 221 (348)
T 2w2k_A 142 GDPETFNRVHLEIGKSAHNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRS 221 (348)
T ss_dssp CCHHHHHHHHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHC
T ss_pred CCCcccccccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccC
Confidence 99 94211 012357899999999999999999999999 9999999999987666656666777666899999999
Q ss_pred CEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeE
Q 021995 175 DIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQA 254 (304)
Q Consensus 175 DvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~ 254 (304)
|+|++|+|.+++|+++++++.++.||++++|||++||+++|+++|.++|++|++.||++|||++|| +.++||+.+|||+
T Consensus 222 DvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP-~~~~~L~~~~nvi 300 (348)
T 2w2k_A 222 DCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEP-QVSKELIEMKHVT 300 (348)
T ss_dssp SEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTT-SCCHHHHTSSSEE
T ss_pred CEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCC-CCCchhhcCCCEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999 6678899999999
Q ss_pred EccCCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCceeec
Q 021995 255 MTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVK 295 (304)
Q Consensus 255 lTPHia~~t~e~~~~~~~~~~~~l~~~~~g~~~~~~n~~~~ 295 (304)
+|||+++.|.+++.++...+.+||.+|++|+++ .|.++.
T Consensus 301 ltPH~~~~t~e~~~~~~~~~~~ni~~~~~g~~~--~~~v~~ 339 (348)
T 2w2k_A 301 LTTHIGGVAIETFHEFERLTMTNIDRFLLQGKP--LLTPAG 339 (348)
T ss_dssp ECCSCTTCSHHHHHHHHHHHHHHHHHHHHTCCC--CSSBCS
T ss_pred EcCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCC--cceecc
Confidence 999999999999999999999999999999765 344443
No 29
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=3.2e-55 Score=411.08 Aligned_cols=267 Identities=29% Similarity=0.496 Sum_probs=240.9
Q ss_pred ccc-cchhchhHHH-hcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhh
Q 021995 18 GFL-RSSSRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGH 95 (304)
Q Consensus 18 ~~~-~~~~~~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~ 95 (304)
+++ ++.+++++++ +.+|+||+|++.++|+|+ +|+++|+++||.|+|+||+++.+||||++++||++.|++..+.
T Consensus 45 ~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~----id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~ 120 (333)
T 2d0i_A 45 GIIVSPTTKITREVLENAERLKVISCHSAGYDN----IDLEEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYAD 120 (333)
T ss_dssp EEEECTTSCBCHHHHTTCTTCCEEEESSSCCTT----BCHHHHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred EEEECCCCCCCHHHHhhCCCceEEEECCccccc----ccHHHHHhCCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHH
Confidence 455 6667898886 778999999999999985 4599999999999999999999999999999999999999999
Q ss_pred HHHHhCCcccccccccc----cccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhc
Q 021995 96 HQVISGEWNVAGVAYRA----YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTML 171 (304)
Q Consensus 96 ~~~~~~~w~~~~~~~~~----~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell 171 (304)
+.+++|.|........+ .+|.|++|||||+|.||+.+|+.++++|++|++||+++.. +.+.+.|+... ++++++
T Consensus 121 ~~~~~g~w~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~-~l~e~l 198 (333)
T 2d0i_A 121 KFIRRGEWESHAKIWTGFKRIESLYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELKARYM-DIDELL 198 (333)
T ss_dssp HHHHTTCCCCHHHHHTTSCCCCCSTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHTEEEC-CHHHHH
T ss_pred HHHHcCCCCcCcccccCCcccCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCceec-CHHHHH
Confidence 99999999631101124 6899999999999999999999999999999999997754 44556677654 899999
Q ss_pred CcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCC
Q 021995 172 PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMP 251 (304)
Q Consensus 172 ~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~ 251 (304)
++||+|++|+|.+++|+++++++.++.||+| +|||++||.++|+++|.++|+++++.||++|||++||++ ++||+.+|
T Consensus 199 ~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~-~~~L~~~~ 276 (333)
T 2d0i_A 199 EKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFEKEPVR-EHELFKYE 276 (333)
T ss_dssp HHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCSSSSCS-CCGGGGCT
T ss_pred hhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCCCCCCC-CchHHcCC
Confidence 9999999999999999999999999999999 999999999999999999999999999999999999988 89999999
Q ss_pred -CeEEccCCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCceee
Q 021995 252 -NQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIV 294 (304)
Q Consensus 252 -nv~lTPHia~~t~e~~~~~~~~~~~~l~~~~~g~~~~~~n~~~ 294 (304)
|+++|||+++.|.++..++...+.+|+.+|++|+++ .|.++
T Consensus 277 ~nviltPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~--~~~v~ 318 (333)
T 2d0i_A 277 WETVLTPHYAGLALEAQEDVGFRAVENLLKVLRGEVP--EDLVN 318 (333)
T ss_dssp TTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHTTCCC--TTBSC
T ss_pred CCEEEcCccCCCcHHHHHHHHHHHHHHHHHHHcCCCC--cCccC
Confidence 999999999999999999999999999999999876 34443
No 30
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=1.6e-54 Score=405.92 Aligned_cols=266 Identities=24% Similarity=0.366 Sum_probs=242.2
Q ss_pred cchhchhHHH-hcC-CCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHH
Q 021995 21 RSSSRFSRHY-ASS-GSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQV 98 (304)
Q Consensus 21 ~~~~~~~~~l-~~~-~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~ 98 (304)
...+++++++ +++ |+||+|++.++|+|+ +|+++|+++||.|+|+||+++.+||||++++||++.|++..+.+.+
T Consensus 60 ~~~~~~~~~~l~~~~~~Lk~I~~~~~G~d~----id~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~ 135 (330)
T 2gcg_A 60 LLSDHVDKRILDAAGANLKVISTMSVGIDH----LALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEV 135 (330)
T ss_dssp CTTSCBCHHHHHHHCTTCCEEEESSSCCTT----BCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred CCCCCCCHHHHHhcCCCceEEEECCccccc----ccHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 3456788876 677 999999999999985 4599999999999999999999999999999999999999999999
Q ss_pred HhCCcccc-cccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEE
Q 021995 99 ISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIV 177 (304)
Q Consensus 99 ~~~~w~~~-~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV 177 (304)
++|.|... .....+.++.|++|||||+|.||+.+|+.++++|++|++||++....+...+.|+... ++++++++||+|
T Consensus 136 ~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~l~e~l~~aDvV 214 (330)
T 2gcg_A 136 KNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV-STPELAAQSDFI 214 (330)
T ss_dssp HTTCCCSCCTTSSCBCCCTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC-CHHHHHHHCSEE
T ss_pred HcCCCcccCcccccCcCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC-CHHHHHhhCCEE
Confidence 99999642 1112357899999999999999999999999999999999997765555556677665 899999999999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEEcc
Q 021995 178 VVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTP 257 (304)
Q Consensus 178 i~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~lTP 257 (304)
++|+|.+++|+++++++.++.||+|++|||++||+++|+++|.++|++|++.|+++|||++||++.++||+.++|+++||
T Consensus 215 i~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nvi~tP 294 (330)
T 2gcg_A 215 VVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILP 294 (330)
T ss_dssp EECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECC
T ss_pred EEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCCCCCCCChhhcCCCEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCcee
Q 021995 258 HVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYI 293 (304)
Q Consensus 258 Hia~~t~e~~~~~~~~~~~~l~~~~~g~~~~~~n~~ 293 (304)
|+++.|.+++.++...+.+|+.+|++|+++ .|.+
T Consensus 295 h~~~~t~~~~~~~~~~~~~n~~~~~~g~~~--~~~v 328 (330)
T 2gcg_A 295 HIGSATHRTRNTMSLLAANNLLAGLRGEPM--PSEL 328 (330)
T ss_dssp SCTTCBHHHHHHHHHHHHHHHHHHHHTCCC--TTEE
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHcCCCC--CCCC
Confidence 999999999999999999999999999986 4544
No 31
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=1.4e-54 Score=406.95 Aligned_cols=265 Identities=29% Similarity=0.466 Sum_probs=239.7
Q ss_pred cchhchhHHH-hcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHH
Q 021995 21 RSSSRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVI 99 (304)
Q Consensus 21 ~~~~~~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~ 99 (304)
.+.+++++++ +++|+||||++.++|+|+ +|+++|+++||.|+|+||+++.+||||++++||++.|++..+.+.++
T Consensus 52 ~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~----id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~ 127 (334)
T 2dbq_A 52 MLSERIDKEVFENAPKLRIVANYAVGYDN----IDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVR 127 (334)
T ss_dssp CTTSCBCHHHHHTCTTCCEEEESSSCCTT----BCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred cCCCCCCHHHHhhCCCceEEEECCccccc----ccHHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 4456788876 789999999999999985 55999999999999999999999999999999999999999999999
Q ss_pred hCCccc-----ccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcC
Q 021995 100 SGEWNV-----AGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKC 174 (304)
Q Consensus 100 ~~~w~~-----~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~a 174 (304)
+|.|.. ......+.+|.|++|||||+|.||+.+|+.++++|++|++||++... +...+.|+.. .++++++++|
T Consensus 128 ~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~~l~~~l~~a 205 (334)
T 2dbq_A 128 SGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEF-KPLEDLLRES 205 (334)
T ss_dssp TSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEE-CCHHHHHHHC
T ss_pred cCCCcccccccccccccccCCCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCccc-CCHHHHHhhC
Confidence 999961 11112357899999999999999999999999999999999997754 4455667765 4899999999
Q ss_pred CEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeE
Q 021995 175 DIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQA 254 (304)
Q Consensus 175 DvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~ 254 (304)
|+|++|+|.+++|+++++++.++.||++++|||++||.++|+++|.++|++|++.||++|||++|| +.++||+.+|||+
T Consensus 206 DvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP-~~~~~L~~~~~vi 284 (334)
T 2dbq_A 206 DFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEP-YYNEELFKLDNVV 284 (334)
T ss_dssp SEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSS-CCCHHHHHCTTEE
T ss_pred CEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCCCC-CCCchhhcCCCEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999 8889999999999
Q ss_pred EccCCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCceee
Q 021995 255 MTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIV 294 (304)
Q Consensus 255 lTPHia~~t~e~~~~~~~~~~~~l~~~~~g~~~~~~n~~~ 294 (304)
+|||+++.|.++..++...+.+||.+|++|+++ .|.++
T Consensus 285 ~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~--~~~v~ 322 (334)
T 2dbq_A 285 LTPHIGSASFGAREGMAELVAKNLIAFKRGEIP--PTLVN 322 (334)
T ss_dssp ECSSCTTCSHHHHHHHHHHHHHHHHHHHTTCCC--TTBSC
T ss_pred ECCccCCCcHHHHHHHHHHHHHHHHHHHcCCCC--ccccC
Confidence 999999999999999999999999999999876 34444
No 32
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.6e-55 Score=405.09 Aligned_cols=238 Identities=23% Similarity=0.360 Sum_probs=216.9
Q ss_pred cCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCccccccccc
Q 021995 32 SSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYR 111 (304)
Q Consensus 32 ~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~ 111 (304)
++|+||+|++.++|+|++ |+++|.+++|.++| +|.++.+||||++++||++.|++..+.+.+++|.|.+..
T Consensus 46 ~~~~Lk~I~~~~~G~d~i----d~~~~~~~~~~~~~-~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~---- 116 (290)
T 3gvx_A 46 LGKRTKMIQAISAGVDHI----DVNGIPENVVLCSN-AGAYSISVAEHAFALLLAHAKNILENNELMKAGIFRQSP---- 116 (290)
T ss_dssp CCSSCCEEEECSSCCTTS----CGGGSCTTSEEECC-HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCC----
T ss_pred hhhhhHHHHHHhcCCcee----ecCCCccceEEeec-CCcceeeHHHHHHHHHHHHHHhhhhhhhHhhhcccccCC----
Confidence 789999999999999965 47788887666555 588899999999999999999999999999999998642
Q ss_pred ccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccc
Q 021995 112 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF 191 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i 191 (304)
.++|.|+||||||+|.||+.+|++|++||++|++|||++.+.+. ....+++++++++||+|++|+|++++|++++
T Consensus 117 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----~~~~~~l~ell~~aDiV~l~~P~t~~t~~li 191 (290)
T 3gvx_A 117 TTLLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----DVISESPADLFRQSDFVLIAIPLTDKTRGMV 191 (290)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----SEECSSHHHHHHHCSEEEECCCCCTTTTTCB
T ss_pred ceeeecchheeeccCchhHHHHHHHHhhCcEEEEEecccccccc-----ccccCChHHHhhccCeEEEEeeccccchhhh
Confidence 36899999999999999999999999999999999998654322 3456699999999999999999999999999
Q ss_pred cHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEEccCCC-cCCHHHHHHH
Q 021995 192 DKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVS-GTTIDAQLRY 270 (304)
Q Consensus 192 ~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~lTPHia-~~t~e~~~~~ 270 (304)
+++.|+.||+|++|||+|||+++|+++|+++|++|++.||+||||++||+ +|||.+||+++|||+| ++|.++++++
T Consensus 192 ~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~---~pL~~~~nvilTPHiag~~t~e~~~~~ 268 (290)
T 3gvx_A 192 NSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPE---ITETNLRNAILSPHVAGGMSGEIMDIA 268 (290)
T ss_dssp SHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTS---CCSCCCSSEEECCSCSSCBTTBCCHHH
T ss_pred hHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCcc---cchhhhhhhhcCccccCCccchHHHHH
Confidence 99999999999999999999999999999999999999999999999997 8999999999999999 8999999999
Q ss_pred HHHHHHHHHHHHcCCC
Q 021995 271 AAGVKDMLDRYFKGED 286 (304)
Q Consensus 271 ~~~~~~~l~~~~~g~~ 286 (304)
...+.+||.+|++|+-
T Consensus 269 ~~~~~~ni~~~~~~~~ 284 (290)
T 3gvx_A 269 IQLAFENVRNFFEGEG 284 (290)
T ss_dssp HHHHHHHHHHHTC---
T ss_pred HHHHHHHHHhhhcCCC
Confidence 9999999999999875
No 33
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=7.6e-54 Score=405.88 Aligned_cols=236 Identities=23% Similarity=0.385 Sum_probs=212.7
Q ss_pred ccchhchhHHHhcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHH
Q 021995 20 LRSSSRFSRHYASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVI 99 (304)
Q Consensus 20 ~~~~~~~~~~l~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~ 99 (304)
.++.+++++++..+++||+|++.++|+|++ |+++|+++||.|+|+||+++.+||||+++++|++.|+.
T Consensus 46 ~~~~~~v~~~ll~~~~Lk~I~~~~~G~D~i----D~~~~~~~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~-------- 113 (381)
T 3oet_A 46 VRSVTKVNESLLSGTPINFVGTATAGTDHV----DEAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERD-------- 113 (381)
T ss_dssp ECTTSCBSHHHHTTSCCCEEEESSSCCTTB----CHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHHT--------
T ss_pred ECCCCCCCHHHHcCCCCEEEEEcccccccc----CHHHHHhCCEEEEECCCcCcchhHHHHHHHHHHHHHhc--------
Confidence 456678999985577899999999999855 59999999999999999999999999999999999852
Q ss_pred hCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEE
Q 021995 100 SGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVV 179 (304)
Q Consensus 100 ~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~ 179 (304)
+.+|.|+||||||+|.||+.+|++|++|||+|++||+... ....+. ...++++++++||+|++
T Consensus 114 ------------g~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~----~~~~~~-~~~sl~ell~~aDiV~l 176 (381)
T 3oet_A 114 ------------GFSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRA----ARGDEG-DFRTLDELVQEADVLTF 176 (381)
T ss_dssp ------------TCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHH----HTTCCS-CBCCHHHHHHHCSEEEE
T ss_pred ------------CCccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCChH----HhccCc-ccCCHHHHHhhCCEEEE
Confidence 3479999999999999999999999999999999997421 111222 34689999999999999
Q ss_pred cCCCChh----hhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEE
Q 021995 180 NTPLTEK----TRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAM 255 (304)
Q Consensus 180 ~~p~~~~----t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~l 255 (304)
|+|++++ |+++++++.|+.||+|++|||+|||++||+++|+++|++|++.||+||||++||++. ++||.++ +++
T Consensus 177 ~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP~~~-~~L~~~~-~i~ 254 (381)
T 3oet_A 177 HTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEPDLN-VALLEAV-DIG 254 (381)
T ss_dssp CCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCC-HHHHHHS-SEE
T ss_pred cCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCCCCc-chhhhCC-EEE
Confidence 9999999 999999999999999999999999999999999999999999999999999999875 4688764 899
Q ss_pred ccCCCcCCHHHHHHHHHHHHHHHHHHHcCCC
Q 021995 256 TPHVSGTTIDAQLRYAAGVKDMLDRYFKGED 286 (304)
Q Consensus 256 TPHia~~t~e~~~~~~~~~~~~l~~~~~g~~ 286 (304)
|||+||+|.|++.++...+.+|+.+|+.+.+
T Consensus 255 TPHiag~t~e~~~~~~~~~~~~l~~~l~~~~ 285 (381)
T 3oet_A 255 TSHIAGYTLEGKARGTTQVFEAYSAFIGREQ 285 (381)
T ss_dssp CSSCTTCCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCccCcCcHHHHHHHHHHHHHHHHHHHcCCc
Confidence 9999999999999999999999999998854
No 34
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=6.7e-52 Score=410.32 Aligned_cols=259 Identities=32% Similarity=0.486 Sum_probs=240.7
Q ss_pred ccchhchhHHH-hcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHH
Q 021995 20 LRSSSRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQV 98 (304)
Q Consensus 20 ~~~~~~~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~ 98 (304)
.++.+++++++ +++|+||+|++.++|+| ++|+++|.++||.|+|+||+|+.+||||++++||+++|+++.+++.+
T Consensus 50 ~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d----~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~ 125 (529)
T 1ygy_A 50 VRSATTVDAEVLAAAPKLKIVARAGVGLD----NVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASL 125 (529)
T ss_dssp ECSSSCBCHHHHHTCTTCCEEEESSSCCT----TBCHHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred EcCCCCCCHHHHhhCCCCcEEEECCcCcC----ccCHhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 46678898886 78899999999999998 45699999999999999999999999999999999999999999999
Q ss_pred HhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEE
Q 021995 99 ISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVV 178 (304)
Q Consensus 99 ~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi 178 (304)
++|.|.+.. +.+.+|.|++|||||+|.||+.+|++|+++|++|++||++. ..+.+.+.|+... ++++++++||+|+
T Consensus 126 ~~g~w~~~~--~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~g~~~~-~l~e~~~~aDvV~ 201 (529)
T 1ygy_A 126 REHTWKRSS--FSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYV-SPARAAQLGIELL-SLDDLLARADFIS 201 (529)
T ss_dssp HTTCCCGGG--CCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTS-CHHHHHHHTCEEC-CHHHHHHHCSEEE
T ss_pred HhCCCcccC--cCccccCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCC-ChhHHHhcCcEEc-CHHHHHhcCCEEE
Confidence 999997643 34679999999999999999999999999999999999976 3455667788766 8999999999999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEEccC
Q 021995 179 VNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPH 258 (304)
Q Consensus 179 ~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~lTPH 258 (304)
+|+|.++.|+++++++.++.||+|+++||++||.++|+++|+++|++|++.||++|||+.||. .++|||+++|+++|||
T Consensus 202 l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~-~~~~L~~~~~vilTPh 280 (529)
T 1ygy_A 202 VHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPC-TDSPLFELAQVVVTPH 280 (529)
T ss_dssp ECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSC-SCCGGGGCTTEEECSS
T ss_pred ECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCC-CCchHHhCCCEEEccc
Confidence 999999999999999899999999999999999999999999999999999999999999996 6899999999999999
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHcCCCC
Q 021995 259 VSGTTIDAQLRYAAGVKDMLDRYFKGEDF 287 (304)
Q Consensus 259 ia~~t~e~~~~~~~~~~~~l~~~~~g~~~ 287 (304)
++++|.++++++...+.+++.+|+.|+++
T Consensus 281 ~~~~t~ea~~~~~~~~~~~l~~~l~~~~~ 309 (529)
T 1ygy_A 281 LGASTAEAQDRAGTDVAESVRLALAGEFV 309 (529)
T ss_dssp CSSCBHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999875
No 35
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.1e-51 Score=389.92 Aligned_cols=237 Identities=26% Similarity=0.402 Sum_probs=213.5
Q ss_pred ccchhchhHHHhcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHH
Q 021995 20 LRSSSRFSRHYASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVI 99 (304)
Q Consensus 20 ~~~~~~~~~~l~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~ 99 (304)
.++.+++++++..+|+||+|++.++|+|++ |+++|+++||.|+|+||+++.+||||+++++|++.|+.
T Consensus 43 ~~~~~~~~~~~l~~~~Lk~I~~~~~G~D~i----D~~~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~-------- 110 (380)
T 2o4c_A 43 VRSVTEVSRAALAGSPVRFVGTCTIGTDHL----DLDYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVR-------- 110 (380)
T ss_dssp ECTTSCBCHHHHTTSCCCEEEECSSCSTTB----CHHHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHH--------
T ss_pred EcCCCCCCHHHhcCCCceEEEEcCcccchh----hHHHHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhhh--------
Confidence 356678988874489999999999999855 58999999999999999999999999999999999862
Q ss_pred hCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEE
Q 021995 100 SGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVV 179 (304)
Q Consensus 100 ~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~ 179 (304)
+.+|.|++|||||+|+||+.+|++|++||++|++||++... ...+.. ..++++++++||+|++
T Consensus 111 ------------~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~----~~~g~~-~~~l~ell~~aDvV~l 173 (380)
T 2o4c_A 111 ------------GADLAERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQA----REPDGE-FVSLERLLAEADVISL 173 (380)
T ss_dssp ------------TCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHH----HSTTSC-CCCHHHHHHHCSEEEE
T ss_pred ------------hcccCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhh----hccCcc-cCCHHHHHHhCCEEEE
Confidence 24799999999999999999999999999999999975311 123433 4589999999999999
Q ss_pred cCCCChh----hhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEE
Q 021995 180 NTPLTEK----TRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAM 255 (304)
Q Consensus 180 ~~p~~~~----t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~l 255 (304)
|+|++++ |+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||++ +++|+. +|+++
T Consensus 174 ~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~-~~~l~~-~nvi~ 251 (380)
T 2o4c_A 174 HTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQA-DPELAA-RCLIA 251 (380)
T ss_dssp CCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSC-CHHHHT-TCSEE
T ss_pred eccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeeccCCCC-chhhcc-CCEEE
Confidence 9999999 99999999999999999999999999999999999999999999999999999965 456776 59999
Q ss_pred ccCCCcCCHHHHHHHHHHHHHHHHHHHcCCCC
Q 021995 256 TPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDF 287 (304)
Q Consensus 256 TPHia~~t~e~~~~~~~~~~~~l~~~~~g~~~ 287 (304)
|||+||+|.+++.++...+.+|+.+|++|++.
T Consensus 252 TPHiag~t~e~~~~~~~~~~~nl~~~l~g~~~ 283 (380)
T 2o4c_A 252 TPHIAGYSLEGKLRGTAQIYQAYCAWRGIAER 283 (380)
T ss_dssp CSSCTTCCHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred ccccCcCCHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 99999999999999999999999999999863
No 36
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=100.00 E-value=6.4e-36 Score=290.42 Aligned_cols=225 Identities=14% Similarity=0.115 Sum_probs=193.7
Q ss_pred CCcEEEE-EeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccc
Q 021995 34 GSKKIVG-VFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRA 112 (304)
Q Consensus 34 ~~lk~i~-~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~ 112 (304)
++++.|+ ..++|+|+ +.+|.++||.|+|+++++. +||| ++.|++....+.+++| |.+. .+
T Consensus 192 ~~l~gi~eet~~Gvd~------l~a~~~~Gilv~p~~~vn~-sVae-------~l~r~~~~~~~~l~~g-w~r~----~~ 252 (479)
T 1v8b_A 192 KKIIGVSEETTTGVLR------LKKMDKQNELLFTAINVND-AVTK-------QKYDNVYGCRHSLPDG-LMRA----TD 252 (479)
T ss_dssp TTCCEEEECSHHHHHH------HHHHHHTTCCCSEEEECTT-SHHH-------HTTHHHHHHHHHHHHH-HHHH----HC
T ss_pred cCeEEEEEeeCccHhH------HHHHHHcCCEEeccCCccH-HHHH-------HHHhchHhHHHHHhhh-hhhc----cc
Confidence 7888888 67889984 4689999999999999999 9999 3456666666666777 8642 35
Q ss_pred cccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhcccc
Q 021995 113 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 113 ~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~ 192 (304)
.++.|++|||||+|.||+.+|+++++||++|++||+++.....+...|+.. .++++++++||+|++|+ .|+++|+
T Consensus 253 ~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~-~~l~ell~~aDiVi~~~----~t~~lI~ 327 (479)
T 1v8b_A 253 FLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNV-VTLDEIVDKGDFFITCT----GNVDVIK 327 (479)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEE-CCHHHHTTTCSEEEECC----SSSSSBC
T ss_pred cccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEe-cCHHHHHhcCCEEEECC----ChhhhcC
Confidence 689999999999999999999999999999999999764333445567654 48999999999999995 5789999
Q ss_pred HHHHhcCCCCCEEEEcCCCch-hchHHHHH--HHHcCCceEEEeecCCCCCCCCCCCccCC--CCeEEccCCC-cCCHH-
Q 021995 193 KDRIAKMKKGVLIVNNARGAI-MDTQAVVD--ACSSGHIAGYSGDVWNPQPAPKDHPWRYM--PNQAMTPHVS-GTTID- 265 (304)
Q Consensus 193 ~~~l~~mk~g~ilVn~~rg~~-vd~~aL~~--aL~~g~i~ga~lDV~~~ep~~~~~~l~~~--~nv~lTPHia-~~t~e- 265 (304)
++.|+.||+|++|||+|||++ ||+++|.+ +|++|+|+ +++||| |+|.++|||.+ ||+++| |+| |.+.+
T Consensus 328 ~~~l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~---plp~~~~l~~l~~~nvv~t-H~atghp~e~ 402 (479)
T 1v8b_A 328 LEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRI---TLPNGNKIIVLARGRLLNL-GCATGHPAFV 402 (479)
T ss_dssp HHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEE---ECTTSCEEEEEGGGSBHHH-HSSCCSCHHH
T ss_pred HHHHhhcCCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEE---ECCCCCeeeEecCCCEEEE-eccCCCCchh
Confidence 999999999999999999999 99999999 99999999 899998 45568899988 999999 999 66766
Q ss_pred HHHHHHHHHHHHHHHHHcCC--CC
Q 021995 266 AQLRYAAGVKDMLDRYFKGE--DF 287 (304)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~g~--~~ 287 (304)
+..++...+.+|+..|++|+ ++
T Consensus 403 ~~~s~a~~~~~ni~~~~~g~~~~l 426 (479)
T 1v8b_A 403 MSFSFCNQTFAQLDLWQNKDTNKY 426 (479)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSSSC
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcC
Confidence 67788889999999999998 76
No 37
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=100.00 E-value=3.4e-36 Score=293.34 Aligned_cols=224 Identities=14% Similarity=0.143 Sum_probs=188.3
Q ss_pred CCcEEEE-EeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccc
Q 021995 34 GSKKIVG-VFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRA 112 (304)
Q Consensus 34 ~~lk~i~-~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~ 112 (304)
|+++.|+ ..++|+|+ +.+|.++||.|+|+++++. +|||+. .|++....+...+| |.+ ..+
T Consensus 212 ~~l~gi~eet~~Gvd~------l~a~~~~Gilv~n~~~vn~-sVae~l-------~r~~~~~~~~l~~g-w~~----~~g 272 (494)
T 3d64_A 212 AHIKGVTEETTTGVHR------LYQMEKDGRLPFPAFNVND-SVTKSK-------FDNLYGCRESLVDG-IKR----ATD 272 (494)
T ss_dssp TTCCCEEECSHHHHHH------HHHHHHTTCCCSCEEECTT-SHHHHH-------HHHHHHHHTTHHHH-HHH----HHC
T ss_pred hCcEEEEEEcccCHhh------HHHHHHCCCEEEECCCccH-HHHHHH-------HhhhHhhhhhhhhh-hhh----ccc
Confidence 7888888 77889984 4689999999999999999 999954 35554444444555 753 235
Q ss_pred cccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhcccc
Q 021995 113 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 113 ~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~ 192 (304)
.++.|++|||||+|.||+.+|++|++||++|++||+++.....+...|+... ++++++++||+|++|+ .|+++|+
T Consensus 273 ~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~-~l~ell~~aDiVi~~~----~t~~lI~ 347 (494)
T 3d64_A 273 VMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVV-TMEYAADKADIFVTAT----GNYHVIN 347 (494)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEEC-CHHHHTTTCSEEEECS----SSSCSBC
T ss_pred cccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeC-CHHHHHhcCCEEEECC----CcccccC
Confidence 6899999999999999999999999999999999997643323345566654 8999999999999998 4789999
Q ss_pred HHHHhcCCCCCEEEEcCCCch-hchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCC--CCeEEccCCC-cCCHH-HH
Q 021995 193 KDRIAKMKKGVLIVNNARGAI-MDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYM--PNQAMTPHVS-GTTID-AQ 267 (304)
Q Consensus 193 ~~~l~~mk~g~ilVn~~rg~~-vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~--~nv~lTPHia-~~t~e-~~ 267 (304)
++.|+.||+|++|||+|||++ ||+++| ++|++|+|+ +++|+| |+|.++|||.+ ||+++| |+| +.+.+ +.
T Consensus 348 ~~~l~~MK~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv~---plp~~~pL~~l~~~nvv~t-H~atg~~~~~~~ 421 (494)
T 3d64_A 348 HDHMKAMRHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDHI---IFPDGKRVILLAEGRLVNL-GCATGHPSFVMS 421 (494)
T ss_dssp HHHHHHCCTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEEE---ECTTSCEEEEEGGGSBHHH-HTSCCSCHHHHH
T ss_pred HHHHhhCCCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEEE---ECCCCCchhhcCCCCEEEE-eCcCCCCHHHHH
Confidence 999999999999999999999 699999 999999998 555654 77788999998 999999 999 66755 67
Q ss_pred HHHHHHHHHHHHHHHcCCCC
Q 021995 268 LRYAAGVKDMLDRYFKGEDF 287 (304)
Q Consensus 268 ~~~~~~~~~~l~~~~~g~~~ 287 (304)
.++...+.+|+..|++|+++
T Consensus 422 ~~~a~~~~~ni~~~~~g~~~ 441 (494)
T 3d64_A 422 NSFTNQTLAQIELFTRGGEY 441 (494)
T ss_dssp HHHHHHHHHHHHHHHHGGGS
T ss_pred HHHHHHHHHHHHHHHcCCCC
Confidence 88888999999999999887
No 38
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.92 E-value=5.8e-25 Score=202.06 Aligned_cols=157 Identities=15% Similarity=0.199 Sum_probs=133.2
Q ss_pred chhchhHHH-hcCCCcEEEEEeeecccCCCCcccH-HHHHhCCcEEEEcC------CCChhHHHHHHHHHHHHHHhCcch
Q 021995 22 SSSRFSRHY-ASSGSKKIVGVFYKGNEYASMNPNF-LAAAAAGLTVAEVT------GSNVVSVAEDELMRILILVRNFLP 93 (304)
Q Consensus 22 ~~~~~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d~-~~~~~~gI~v~n~~------g~~~~~vAE~al~~~L~~~R~~~~ 93 (304)
.++++++++ +.+|+||+|. +|+| ++|+ ++|+++||.|+|+| ++++.+|||++++++|..
T Consensus 82 ~~~~~~~~~l~~~~~l~~i~---~G~d----~id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~------ 148 (293)
T 3d4o_A 82 ESIVLTEEMIEKTPNHCVVY---SGIS----NTYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQH------ 148 (293)
T ss_dssp CCCBCCHHHHHTSCTTCEEE---ESSC----CHHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHH------
T ss_pred CCccchHHHHHhCCCCCEEE---ecCC----CHHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHh------
Confidence 345687765 7899999997 7887 5667 79999999999998 889999999999998863
Q ss_pred hhHHHHhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCcee--cCCHHhhc
Q 021995 94 GHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF--EEDLDTML 171 (304)
Q Consensus 94 ~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~--~~~l~ell 171 (304)
.+.++.|++|||||+|.||+.+++.++++|++|++|||++.+.+...+.|+.. ..++++++
T Consensus 149 -----------------~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l 211 (293)
T 3d4o_A 149 -----------------TDFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQEL 211 (293)
T ss_dssp -----------------CSSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHT
T ss_pred -----------------cCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHh
Confidence 12468999999999999999999999999999999999764444445566654 25788999
Q ss_pred CcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCch
Q 021995 172 PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAI 213 (304)
Q Consensus 172 ~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~ 213 (304)
+++|+|++|+|. ++++++.++.||+++++||++||+.
T Consensus 212 ~~aDvVi~~~p~-----~~i~~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 212 RDVDVCINTIPA-----LVVTANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp TTCSEEEECCSS-----CCBCHHHHHHSCTTCEEEECSSTTC
T ss_pred cCCCEEEECCCh-----HHhCHHHHHhcCCCCEEEEecCCCC
Confidence 999999999995 6888899999999999999999764
No 39
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.90 E-value=1.8e-25 Score=218.36 Aligned_cols=217 Identities=18% Similarity=0.179 Sum_probs=171.6
Q ss_pred EeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEE
Q 021995 41 VFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTV 120 (304)
Q Consensus 41 ~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~v 120 (304)
..++|+|+ +.++.++||.++|+++.+. +|||+.+ |++.........+ |.+. .+..+.|++|
T Consensus 217 etgtGVd~------l~a~~~~Gilv~~~~~vn~-sVae~~~-------r~l~~~~~s~~~g-~~r~----~~~~l~GktV 277 (494)
T 3ce6_A 217 ETTTGVLR------LYQFAAAGDLAFPAINVND-SVTKSKF-------DNKYGTRHSLIDG-INRG----TDALIGGKKV 277 (494)
T ss_dssp CSHHHHHH------HHHHHHTTCCCSCEEECTT-SHHHHTT-------HHHHHHHHHHHHH-HHHH----HCCCCTTCEE
T ss_pred EeCCChhH------HHHHHHcCCEEEecCCccH-HHHHHHH-------hhhhhhhhhhhHH-HHhc----cCCCCCcCEE
Confidence 45678874 4688999999999999998 9999533 3332222222222 4321 2346899999
Q ss_pred EEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHHHHhcCC
Q 021995 121 GTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMK 200 (304)
Q Consensus 121 gIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~l~~mk 200 (304)
+|+|+|.||+.+|+.++++|++|+++|+++.+.+.+.+.|+.. .+++++++++|+|+.|++ +.++++.+.++.||
T Consensus 278 ~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~-~~l~e~l~~aDvVi~atg----t~~~i~~~~l~~mk 352 (494)
T 3ce6_A 278 LICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDV-VTVEEAIGDADIVVTATG----NKDIIMLEHIKAMK 352 (494)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHGGGCSEEEECSS----SSCSBCHHHHHHSC
T ss_pred EEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEE-ecHHHHHhCCCEEEECCC----CHHHHHHHHHHhcC
Confidence 9999999999999999999999999999776556667788875 489999999999999986 45688889999999
Q ss_pred CCCEEEEcCCCch-hchHHHHH-HHHcCCceEEEeecCCCCCCCCCCC--ccCCCCeE----EccCCCcCCHHHHHHHHH
Q 021995 201 KGVLIVNNARGAI-MDTQAVVD-ACSSGHIAGYSGDVWNPQPAPKDHP--WRYMPNQA----MTPHVSGTTIDAQLRYAA 272 (304)
Q Consensus 201 ~g~ilVn~~rg~~-vd~~aL~~-aL~~g~i~ga~lDV~~~ep~~~~~~--l~~~~nv~----lTPHia~~t~e~~~~~~~ 272 (304)
+|+++||+||++. +|..+|.. +|+++.+. ..+|+|+.++. .++ ++..++++ +|||+++.+.++ +..
T Consensus 353 ~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~--~~~l~LL~~grlvnL~~~TPH~a~~~~~s---~~~ 426 (494)
T 3ce6_A 353 DHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDT--GRSIIVLSEGRLLNLGNATGHPSFVMSNS---FAN 426 (494)
T ss_dssp TTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTT--CCEEEEEGGGSCHHHHHSCCSCHHHHHHH---HHH
T ss_pred CCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCc--chHHHHHhCCCEEeccCCCCCccccchHH---HHH
Confidence 9999999999999 89999998 88888888 56798865331 344 55567887 999999987765 356
Q ss_pred HHHHHHHHHHcCCCC
Q 021995 273 GVKDMLDRYFKGEDF 287 (304)
Q Consensus 273 ~~~~~l~~~~~g~~~ 287 (304)
.+.+++..|.+|+++
T Consensus 427 qa~~ai~~~~~g~~~ 441 (494)
T 3ce6_A 427 QTIAQIELWTKNDEY 441 (494)
T ss_dssp HHHHHHHHHHTGGGC
T ss_pred HHHHHHHHHHcCCCC
Confidence 788899999998776
No 40
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.89 E-value=1e-22 Score=193.54 Aligned_cols=219 Identities=14% Similarity=0.148 Sum_probs=162.1
Q ss_pred eee--ccccccchhchhHHHh-cCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEE----------EcCCCChhHHHHH
Q 021995 13 AFA--SSGFLRSSSRFSRHYA-SSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVA----------EVTGSNVVSVAED 79 (304)
Q Consensus 13 ~~~--~~~~~~~~~~~~~~l~-~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~----------n~~g~~~~~vAE~ 79 (304)
..| .+.++....++.+++. ..+...++.....+.| ...++++.++||++. |.|.+ .++||+
T Consensus 63 ~~~~~adii~~vk~p~~~e~~~l~~~~~l~~~~~~~~~----~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~--s~~ae~ 136 (377)
T 2vhw_A 63 QVWADADLLLKVKEPIAAEYGRLRHGQILFTFLHLAAS----RACTDALLDSGTTSIAYETVQTADGALPLL--APMSEV 136 (377)
T ss_dssp HHHHHCSEEECSSCCCGGGGGGCCTTCEEEECCCGGGC----HHHHHHHHHHTCEEEEGGGCCCTTSCCTTT--HHHHHH
T ss_pred HHhccCCEEEEeCCCChHHHhhcCCCCEEEEEecccCC----HHHHHHHHHcCCeEEEeeeccccCCCcccc--CchHHH
Confidence 445 3456666777888874 4577777776655554 455788999999998 55554 466799
Q ss_pred HHHHHHHHH-hCcchhhHHHHhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHh
Q 021995 80 ELMRILILV-RNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE 158 (304)
Q Consensus 80 al~~~L~~~-R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~ 158 (304)
+..+++.+. |++. ....|+|.... ...++.|++|+|+|+|.||+.+++.++++|++|+++|+++...+.+.+
T Consensus 137 ag~~a~~~a~r~l~----~~~~g~~~~~~---~~~~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~ 209 (377)
T 2vhw_A 137 AGRLAAQVGAYHLM----RTQGGRGVLMG---GVPGVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDA 209 (377)
T ss_dssp HHHHHHHHHHHHTS----GGGTSCCCCTT---CBTTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----HhcCCCccccc---CCCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence 986555554 6663 23344433211 123689999999999999999999999999999999997654444444
Q ss_pred -cCce------ecCCHHhhcCcCCEEEEcC--CCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 159 -TGAK------FEEDLDTMLPKCDIVVVNT--PLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 159 -~g~~------~~~~l~ell~~aDvVi~~~--p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
.|.. ...+++++++++|+|+.++ |.+ ++.++++++.++.||+|+++||++.. .|
T Consensus 210 ~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~-~t~~li~~~~l~~mk~g~~iV~va~~-------------~G--- 272 (377)
T 2vhw_A 210 EFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA-KAPKLVSNSLVAHMKPGAVLVDIAID-------------QG--- 272 (377)
T ss_dssp HTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS-CCCCCBCHHHHTTSCTTCEEEEGGGG-------------TT---
T ss_pred hcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC-CCcceecHHHHhcCCCCcEEEEEecC-------------CC---
Confidence 4543 1235778888999999976 544 67889999999999999999999921 11
Q ss_pred EEEeecCCC-CCCCCCCCccCCCCeE--EccCCCcCCHH
Q 021995 230 GYSGDVWNP-QPAPKDHPWRYMPNQA--MTPHVSGTTID 265 (304)
Q Consensus 230 ga~lDV~~~-ep~~~~~~l~~~~nv~--lTPHia~~t~e 265 (304)
| ||+. ||.+.++|++..+|++ .|||+++.+..
T Consensus 273 g----v~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~~~ 307 (377)
T 2vhw_A 273 G----CFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPK 307 (377)
T ss_dssp C----SBTTCCCBCSSSCEEEETTEEEECBTTGGGGSHH
T ss_pred C----ccccccCCCCCCCEEEECCEEEEecCCcchhhHH
Confidence 1 6787 8988889999999998 89999999866
No 41
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.86 E-value=4.3e-22 Score=183.45 Aligned_cols=159 Identities=16% Similarity=0.224 Sum_probs=124.7
Q ss_pred hhHHH-hcCCCcEEEEEeeecccCCCCccc-HHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCc
Q 021995 26 FSRHY-ASSGSKKIVGVFYKGNEYASMNPN-FLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEW 103 (304)
Q Consensus 26 ~~~~l-~~~~~lk~i~~~~~G~d~~~~~~d-~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w 103 (304)
+++++ +.+|++|+|. +|+| ++| +++|.++||.|+|+|+++ ++ ++.|++... +|.|
T Consensus 88 ~~~~~l~~~~~l~~i~---~g~~----~~d~~~~~~~~gi~v~~~~~~~--~v---------~~~r~~~~~-----~g~~ 144 (300)
T 2rir_A 88 LKQDHLDRTPAHCVIF---SGIS----NAYLENIAAQAKRKLVKLFERD--DI---------AIYNSIPTV-----EGTI 144 (300)
T ss_dssp CCHHHHHTSCTTCEEE---ESSC----CHHHHHHHHHTTCCEEEGGGSH--HH---------HHHHHHHHH-----HHHH
T ss_pred chHHHHhhcCCCCEEE---EecC----CHHHHHHHHHCCCEEEeecCCC--ce---------EEEcCccHH-----HHHH
Confidence 76654 7899999988 7885 788 889999999999999974 33 223443322 3445
Q ss_pred ccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCcee--cCCHHhhcCcCCEEEEcC
Q 021995 104 NVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF--EEDLDTMLPKCDIVVVNT 181 (304)
Q Consensus 104 ~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~--~~~l~ell~~aDvVi~~~ 181 (304)
... ....+.++.|++|||||+|.||+.+++.|+++|++|++|||+..+.+...+.|+.. ..++++++++||+|++|+
T Consensus 145 ~~~-~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~ 223 (300)
T 2rir_A 145 MLA-IQHTDYTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTI 223 (300)
T ss_dssp HHH-HHTCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECC
T ss_pred HHH-HHhcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECC
Confidence 421 11235689999999999999999999999999999999999764333334456543 357899999999999999
Q ss_pred CCChhhhccccHHHHhcCCCCCEEEEcCCCch
Q 021995 182 PLTEKTRGMFDKDRIAKMKKGVLIVNNARGAI 213 (304)
Q Consensus 182 p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~ 213 (304)
|. ++++++.++.||+++++||++||+.
T Consensus 224 p~-----~~i~~~~~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 224 PS-----MILNQTVLSSMTPKTLILDLASRPG 250 (300)
T ss_dssp SS-----CCBCHHHHTTSCTTCEEEECSSTTC
T ss_pred Ch-----hhhCHHHHHhCCCCCEEEEEeCCCC
Confidence 96 6888899999999999999999864
No 42
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.80 E-value=5.1e-21 Score=183.62 Aligned_cols=155 Identities=14% Similarity=0.183 Sum_probs=122.0
Q ss_pred ccc-cCCCEEEEEeeChhhHHHHHHhcc-CCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCE-EEEcCCCChhhh
Q 021995 112 AYD-LEGKTVGTVGCGRIGKLLLQRLKP-FNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDI-VVVNTPLTEKTR 188 (304)
Q Consensus 112 ~~~-L~g~~vgIIG~G~IG~~lA~~l~~-~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDv-Vi~~~p~~~~t~ 188 (304)
+.+ |+|+||||+|+|+||+.+|++|++ ||++|++++++... .+..... +++++++.+|. .++ +|+ ++|+
T Consensus 206 G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~-----~~~~~gv-dl~~L~~~~d~~~~l-~~l-~~t~ 277 (419)
T 1gtm_A 206 GWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGG-----IYNPDGL-NADEVLKWKNEHGSV-KDF-PGAT 277 (419)
T ss_dssp TCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCE-----EEEEEEE-CHHHHHHHHHHHSSS-TTC-TTSE
T ss_pred CCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCcc-----ccCccCC-CHHHHHHHHHhcCEe-ecC-ccCe
Confidence 446 999999999999999999999999 99999999543211 1111222 56666665443 222 465 5677
Q ss_pred ccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCC-CCccCCCCeEEccCC----C---
Q 021995 189 GMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKD-HPWRYMPNQAMTPHV----S--- 260 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~-~~l~~~~nv~lTPHi----a--- 260 (304)
+ ++.+.|..||+ .+|||++||.+||+++ +++|+.+.|.+++ +||++++ ++|+..+||++|||+ +
T Consensus 278 ~-i~~~~l~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~~V~itPhiaaNaGGvt 349 (419)
T 1gtm_A 278 N-ITNEELLELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEKGILQIPDFLCNAGGVT 349 (419)
T ss_dssp E-ECHHHHHHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHTTCEEECHHHHTTHHHH
T ss_pred e-eCHHHHHhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcCCEEEECchhhhCCcce
Confidence 7 78888999998 5999999999999999 6999999999876 7887654 689999999999999 5
Q ss_pred --------------cCCHHHHHHHHHHHHHHHHHHH
Q 021995 261 --------------GTTIDAQLRYAAGVKDMLDRYF 282 (304)
Q Consensus 261 --------------~~t~e~~~~~~~~~~~~l~~~~ 282 (304)
+.+.|...++...+.+++.+++
T Consensus 350 ~s~~E~~qn~~~~~w~~~ev~~~l~~~m~~~~~~~~ 385 (419)
T 1gtm_A 350 VSYFEWVQNITGYYWTIEEVRERLDKKMTKAFYDVY 385 (419)
T ss_dssp HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeehhhhcccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 4566778888888888888776
No 43
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.79 E-value=9.3e-20 Score=172.57 Aligned_cols=244 Identities=14% Similarity=0.111 Sum_probs=157.3
Q ss_pred eee-ccccccchhchhHHHhcC-CCcEEEEEeeecccCCCCcccHHHHHhCCcEEE---EcCCC-Ch----hHHHHHHH-
Q 021995 13 AFA-SSGFLRSSSRFSRHYASS-GSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVA---EVTGS-NV----VSVAEDEL- 81 (304)
Q Consensus 13 ~~~-~~~~~~~~~~~~~~l~~~-~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~---n~~g~-~~----~~vAE~al- 81 (304)
..| .+.++....++.+++..+ +.+++++....+.+ ..+++++.++||++. +.+.. .. .++++.+-
T Consensus 62 ~~~~ad~il~vk~p~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~l~~~gi~~ia~e~~~~~~~~~~~l~~~s~~ag~ 137 (369)
T 2eez_A 62 EAWGAEMVVKVKEPLPEEYGFLREGLILFTYLHLAAD----RGLTEAMLRSGVTGIAYETVQLPDGTLPLLVPMSEVAGR 137 (369)
T ss_dssp HHTTSSEEECSSCCCGGGGGGCCTTCEEEECCCGGGC----HHHHHHHHHHTCEEEEGGGCCCTTCCCTTTHHHHHHHHH
T ss_pred ceecCCEEEEECCCCHHHHhhcCCCcEEEEEecccCC----HHHHHHHHHCCCeEEEeeccccccCCeeecccchHHHHH
Confidence 355 335666677778888664 78999998887775 456889999999998 44432 11 45555544
Q ss_pred -HHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHh-c
Q 021995 82 -MRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-T 159 (304)
Q Consensus 82 -~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~-~ 159 (304)
+.++. .+.+..... .++.|.. ...++.+++|+|+|.|.||+.+++.++.+|++|+++|+++...+...+ .
T Consensus 138 ~av~~a-~~~l~~~~~--g~~~~~~-----~~~~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~ 209 (369)
T 2eez_A 138 MAPQVG-AQFLEKPKG--GRGVLLG-----GVPGVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF 209 (369)
T ss_dssp HHHHHH-HHHTSGGGT--SCCCCTT-----CBTBBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT
T ss_pred HHHHHH-HHHHHHhcC--CCceecC-----CCCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc
Confidence 33333 332322211 1112211 123689999999999999999999999999999999997644443333 4
Q ss_pred Cce------ecCCHHhhcCcCCEEEEcCCCCh-hhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEE
Q 021995 160 GAK------FEEDLDTMLPKCDIVVVNTPLTE-KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYS 232 (304)
Q Consensus 160 g~~------~~~~l~ell~~aDvVi~~~p~~~-~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~ 232 (304)
|.. ..++++++++++|+|+.|++... .+..++.++.++.||+++++||++-. .| |+
T Consensus 210 g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~-------------~g---g~- 272 (369)
T 2eez_A 210 GGRVITLTATEANIKKSVQHADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVD-------------QG---GC- 272 (369)
T ss_dssp TTSEEEEECCHHHHHHHHHHCSEEEECCC-------CCSCHHHHTTSCTTCEEEECC-----------------------
T ss_pred CceEEEecCCHHHHHHHHhCCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEecC-------------CC---CC-
Confidence 432 12356778889999999998765 57788899999999999999999822 12 44
Q ss_pred eecCCCCCCCCCCCccCCCCeE---------EccCCCcC--CHHHHHHHHHHHHHHHHHHHcCCCC
Q 021995 233 GDVWNPQPAPKDHPWRYMPNQA---------MTPHVSGT--TIDAQLRYAAGVKDMLDRYFKGEDF 287 (304)
Q Consensus 233 lDV~~~ep~~~~~~l~~~~nv~---------lTPHia~~--t~e~~~~~~~~~~~~l~~~~~g~~~ 287 (304)
+|++ ||.+.+.|++..+|++ +|||+++. +.+....+...+.++++.++.++++
T Consensus 273 ~d~~--ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~l~~l~~~g~~~~~~~~~l 336 (369)
T 2eez_A 273 VETI--RPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPYVLKLAEKGLDALLEDAAL 336 (369)
T ss_dssp ---------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHHHHHHHHHTTHHHHSCHHH
T ss_pred CCcc--cCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHHHHHHHhcChhhhhcChHH
Confidence 8988 6777778899899999 88998885 4566777777777777778777655
No 44
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.75 E-value=3.3e-18 Score=163.75 Aligned_cols=145 Identities=14% Similarity=0.163 Sum_probs=112.3
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEeeChhhHHHHHHh
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRL 136 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l 136 (304)
.+.+.+|+|.|++.....+..+...+..-++.+.+ .+ ..+.++.|++|||+|+|.||+.+|++|
T Consensus 167 ~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi-------~r---------atg~~L~GktVgIiG~G~IG~~vA~~L 230 (436)
T 3h9u_A 167 QRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGI-------KR---------ATDVMIAGKTACVCGYGDVGKGCAAAL 230 (436)
T ss_dssp HHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHH-------HH---------HHCCCCTTCEEEEECCSHHHHHHHHHH
T ss_pred HcCCCCCceEeechhhhhhhhhccccchHHHHHHH-------HH---------hcCCcccCCEEEEEeeCHHHHHHHHHH
Confidence 34578999999987555554433333222222211 10 124579999999999999999999999
Q ss_pred ccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCch-hc
Q 021995 137 KPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAI-MD 215 (304)
Q Consensus 137 ~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~-vd 215 (304)
++||++|+++|+++.....+...|.... ++++++++||+|+++. .|.++|+++.|+.||+|++|||+|||.+ ||
T Consensus 231 ka~Ga~Viv~D~~p~~a~~A~~~G~~~~-sL~eal~~ADVVilt~----gt~~iI~~e~l~~MK~gAIVINvgRg~vEID 305 (436)
T 3h9u_A 231 RGFGARVVVTEVDPINALQAAMEGYQVL-LVEDVVEEAHIFVTTT----GNDDIITSEHFPRMRDDAIVCNIGHFDTEIQ 305 (436)
T ss_dssp HHTTCEEEEECSCHHHHHHHHHTTCEEC-CHHHHTTTCSEEEECS----SCSCSBCTTTGGGCCTTEEEEECSSSGGGBC
T ss_pred HHCCCEEEEECCChhhhHHHHHhCCeec-CHHHHHhhCCEEEECC----CCcCccCHHHHhhcCCCcEEEEeCCCCCccC
Confidence 9999999999997654445566777654 8999999999999743 4778999999999999999999999997 89
Q ss_pred hHHHHHH
Q 021995 216 TQAVVDA 222 (304)
Q Consensus 216 ~~aL~~a 222 (304)
.++|.+.
T Consensus 306 ~~~L~~~ 312 (436)
T 3h9u_A 306 VAWLKAN 312 (436)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9988764
No 45
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.72 E-value=5e-18 Score=162.42 Aligned_cols=193 Identities=18% Similarity=0.201 Sum_probs=133.8
Q ss_pred ceee-ccccccchhchhHHHhcC-CCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHH---HH
Q 021995 12 NAFA-SSGFLRSSSRFSRHYASS-GSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRI---LI 86 (304)
Q Consensus 12 ~~~~-~~~~~~~~~~~~~~l~~~-~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~---L~ 86 (304)
...| .+.++...++..++++.+ |++++|+....|+| +++++++.++||+|.+. +.|+|++.++. |+
T Consensus 68 ~~~~~adiil~vk~p~~~~i~~l~~~~~li~~~~~~~d----~~~~~al~~~gI~v~~~-----e~v~~~~~a~~l~~l~ 138 (401)
T 1x13_A 68 NSVWQSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQN----PELMQKLAERNVTVMAM-----DSVPRISRAQSLDALS 138 (401)
T ss_dssp GGGGSSSEEECSSCCCHHHHTTCCTTCEEEECCCGGGC----HHHHHHHHHTTCEEEEG-----GGCCCSGGGGGGCHHH
T ss_pred HHHhcCCeEEEeCCCCHHHHHHhcCCCcEEEEecCCCC----HHHHHHHHHCCCEEEEe-----ehhhhhhhhcccchHH
Confidence 3455 556666666666778765 78999999999886 56799999999999753 34444333332 22
Q ss_pred HHhCcchhhHHHHhCCcccccc-c---ccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCce
Q 021995 87 LVRNFLPGHHQVISGEWNVAGV-A---YRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAK 162 (304)
Q Consensus 87 ~~R~~~~~~~~~~~~~w~~~~~-~---~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~ 162 (304)
..+.+. .+..++.+.|..... . ....++.|++|+|+|+|.||..+++.++.+|++|+++|+++...+.+.++|..
T Consensus 139 ~~a~~a-g~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~ 217 (401)
T 1x13_A 139 SMANIA-GYRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAE 217 (401)
T ss_dssp HHHHHH-HHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCE
T ss_pred HHHHHH-HHHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCE
Confidence 222111 112222222211100 0 00115889999999999999999999999999999999987666666677765
Q ss_pred ecC---------------------------CHHhhcCcCCEEEEc--CCCChhhhccccHHHHhcCCCCCEEEEcC--CC
Q 021995 163 FEE---------------------------DLDTMLPKCDIVVVN--TPLTEKTRGMFDKDRIAKMKKGVLIVNNA--RG 211 (304)
Q Consensus 163 ~~~---------------------------~l~ell~~aDvVi~~--~p~~~~t~~~i~~~~l~~mk~g~ilVn~~--rg 211 (304)
.+. ++++++.++|+|+.+ +|.. .+..+++++.++.||+|+++||++ ||
T Consensus 218 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~aDvVI~~~~~pg~-~ap~li~~~~l~~mk~g~vIVdva~~~G 296 (401)
T 1x13_A 218 FLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGK-PAPKLITREMVDSMKAGSVIVDLAAQNG 296 (401)
T ss_dssp ECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHHCSEEEECCCCTTS-CCCCCBCHHHHHTSCTTCEEEETTGGGT
T ss_pred EEEecccccccccccchhhccHHHHHHHHHHHHHHhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCcEEEEEcCCCC
Confidence 432 367888899999999 5532 355788899999999999999999 77
Q ss_pred chhc
Q 021995 212 AIMD 215 (304)
Q Consensus 212 ~~vd 215 (304)
..++
T Consensus 297 g~v~ 300 (401)
T 1x13_A 297 GNCE 300 (401)
T ss_dssp CSBT
T ss_pred CCcC
Confidence 6543
No 46
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.70 E-value=2.5e-17 Score=157.59 Aligned_cols=105 Identities=21% Similarity=0.213 Sum_probs=92.1
Q ss_pred ccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccc
Q 021995 112 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF 191 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i 191 (304)
+..+.|++|+|+|+|.||+.+|+++++||++|+++++++.....+...|+... ++++++++||+|+++.+ |.++|
T Consensus 242 g~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv-~LeElL~~ADIVv~atg----t~~lI 316 (464)
T 3n58_A 242 DVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVV-TLDDAASTADIVVTTTG----NKDVI 316 (464)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC-CHHHHGGGCSEEEECCS----SSSSB
T ss_pred CCcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceec-cHHHHHhhCCEEEECCC----Ccccc
Confidence 45799999999999999999999999999999999986644444555677654 89999999999998753 67899
Q ss_pred cHHHHhcCCCCCEEEEcCCCch-hchHHHHH
Q 021995 192 DKDRIAKMKKGVLIVNNARGAI-MDTQAVVD 221 (304)
Q Consensus 192 ~~~~l~~mk~g~ilVn~~rg~~-vd~~aL~~ 221 (304)
+++.|+.||+|++|||+|||++ +|.++|.+
T Consensus 317 ~~e~l~~MK~GAILINvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 317 TIDHMRKMKDMCIVGNIGHFDNEIQVAALRN 347 (464)
T ss_dssp CHHHHHHSCTTEEEEECSSSTTTBTCGGGTT
T ss_pred CHHHHhcCCCCeEEEEcCCCCcccCHHHHHh
Confidence 9999999999999999999998 99999974
No 47
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.65 E-value=3.5e-18 Score=163.61 Aligned_cols=215 Identities=16% Similarity=0.169 Sum_probs=156.2
Q ss_pred CCcEEEEEeeecccCCCCcccHHHHH-----hCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCccccc-
Q 021995 34 GSKKIVGVFYKGNEYASMNPNFLAAA-----AAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAG- 107 (304)
Q Consensus 34 ~~lk~i~~~~~G~d~~~~~~d~~~~~-----~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~- 107 (304)
+.+++|..+++|+|+++ +-++. ++++.+++.+|. ..+++++.+..++.+.|++..... ...+.|....
T Consensus 80 ~a~~~i~~v~~Glds~~----vGe~~Il~qvk~~~~~~~~~G~-~~~~~~~~~~~a~~~~k~v~~~~~-~~~~~~s~a~~ 153 (404)
T 1gpj_A 80 EAVRHLFRVASGLESMM----VGEQEILRQVKKAYDRAARLGT-LDEALKIVFRRAINLGKRAREETR-ISEGAVSIGSA 153 (404)
T ss_dssp HHHHHHHHHHTTTTSSS----TTCHHHHHHHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHHSS-TTCSCCSHHHH
T ss_pred hHhhhheeeccCCCCCc----CCcchhHHHHHHHHHHHHHcCC-chHHHHHHHHHHhhhhccCcchhh-hcCCCccHHHH
Confidence 45777888889998764 34444 778888888888 478899999999999998755432 2234453210
Q ss_pred -cccc---ccccCCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCCh-hHHHhcCcee--cCCHHhhcCcCCEEEE
Q 021995 108 -VAYR---AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDP-QLEKETGAKF--EEDLDTMLPKCDIVVV 179 (304)
Q Consensus 108 -~~~~---~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~-~~~~~~g~~~--~~~l~ell~~aDvVi~ 179 (304)
.... ..++.|++|+|||+|.||+.+++.|+.+|+ +|+++||+..+. +.+.++|... ..++.+++.++|+|+.
T Consensus 154 av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~ 233 (404)
T 1gpj_A 154 AVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVS 233 (404)
T ss_dssp HHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEE
T ss_pred HHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEE
Confidence 0000 114799999999999999999999999999 899999976443 4455667643 2467788889999999
Q ss_pred cCCCChhhhccccHHHHhc--CC----CCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCe
Q 021995 180 NTPLTEKTRGMFDKDRIAK--MK----KGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQ 253 (304)
Q Consensus 180 ~~p~~~~t~~~i~~~~l~~--mk----~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv 253 (304)
|+|.+ ..+++.+.++. || ++.++||++ +|.+.+++++.+|||
T Consensus 234 at~~~---~~~~~~~~l~~~~lk~r~~~~~v~vdia-----------------------------~P~~i~~~l~~l~~v 281 (404)
T 1gpj_A 234 ATAAP---HPVIHVDDVREALRKRDRRSPILIIDIA-----------------------------NPRDVEEGVENIEDV 281 (404)
T ss_dssp CCSSS---SCCBCHHHHHHHHHHCSSCCCEEEEECC-----------------------------SSCSBCTTGGGSTTE
T ss_pred ccCCC---CceecHHHHHHHHHhccCCCCEEEEEcc-----------------------------CCCCCCccccccCCe
Confidence 98754 45667777776 32 455666664 365556789999999
Q ss_pred EE--ccCCCcCCHHHHH----------HHHHHHHHHHHHHHcCCC
Q 021995 254 AM--TPHVSGTTIDAQL----------RYAAGVKDMLDRYFKGED 286 (304)
Q Consensus 254 ~l--TPHia~~t~e~~~----------~~~~~~~~~l~~~~~g~~ 286 (304)
++ +||+++.+.+.++ .+.....+++..|+.+.+
T Consensus 282 ~l~d~d~l~~~~~~~~~~r~~~~~~~~~li~q~~~~f~~w~~~~~ 326 (404)
T 1gpj_A 282 EVRTIDDLRVIARENLERRRKEIPKVEKLIEEELSTVEEELEKLK 326 (404)
T ss_dssp EEEEHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99 9999998887654 555566677777876654
No 48
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.64 E-value=3.9e-16 Score=149.06 Aligned_cols=140 Identities=14% Similarity=0.203 Sum_probs=105.6
Q ss_pred hCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccC
Q 021995 60 AAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPF 139 (304)
Q Consensus 60 ~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~ 139 (304)
+..++|.|+......+.-+-..+.--++...+ ++ ..+..+.|++|+|+|+|.||+.+|++|++|
T Consensus 179 ~L~~Pvi~vnds~tK~~fDn~yGt~~s~~~gi-------~r---------at~~~L~GktV~ViG~G~IGk~vA~~Lra~ 242 (435)
T 3gvp_A 179 KLCVPAMNVNDSVTKQKFDNLYCCRESILDGL-------KR---------TTDMMFGGKQVVVCGYGEVGKGCCAALKAM 242 (435)
T ss_dssp CCCSCEEECTTCHHHHHHHTHHHHHHHHHHHH-------HH---------HHCCCCTTCEEEEECCSHHHHHHHHHHHHT
T ss_pred CCCCCEEEecchhhhhhhhhhhhhHHHHHHHH-------HH---------hhCceecCCEEEEEeeCHHHHHHHHHHHHC
Confidence 45699999887655554442222111111110 00 013479999999999999999999999999
Q ss_pred CCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCch-hchHH
Q 021995 140 NCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAI-MDTQA 218 (304)
Q Consensus 140 G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~-vd~~a 218 (304)
|++|+++|+++.....+...|... .+++++++++|+|++| +.|.++|+++.|+.||+|++|||+|||++ +|.++
T Consensus 243 Ga~Viv~D~dp~ra~~A~~~G~~v-~~Leeal~~ADIVi~a----tgt~~lI~~e~l~~MK~gailINvgrg~~EId~~~ 317 (435)
T 3gvp_A 243 GSIVYVTEIDPICALQACMDGFRL-VKLNEVIRQVDIVITC----TGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVAS 317 (435)
T ss_dssp TCEEEEECSCHHHHHHHHHTTCEE-CCHHHHTTTCSEEEEC----SSCSCSBCHHHHHHSCTTEEEEECSSTTTTBTGGG
T ss_pred CCEEEEEeCChhhhHHHHHcCCEe-ccHHHHHhcCCEEEEC----CCCcccCCHHHHHhcCCCcEEEEecCCCccCCHHH
Confidence 999999998764444555667655 4899999999999995 34678999999999999999999999998 77777
Q ss_pred HH
Q 021995 219 VV 220 (304)
Q Consensus 219 L~ 220 (304)
|.
T Consensus 318 L~ 319 (435)
T 3gvp_A 318 LR 319 (435)
T ss_dssp GC
T ss_pred HH
Confidence 64
No 49
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.59 E-value=4.2e-15 Score=141.33 Aligned_cols=188 Identities=19% Similarity=0.191 Sum_probs=124.2
Q ss_pred cccccchhch-----hHHHhcCC-CcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhC
Q 021995 17 SGFLRSSSRF-----SRHYASSG-SKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRN 90 (304)
Q Consensus 17 ~~~~~~~~~~-----~~~l~~~~-~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~ 90 (304)
+.++...+++ .+.+..++ .+++++....+.| +.+++++.++||++++.. .....+++..+. +|+..+.
T Consensus 69 diil~v~~p~~~~~~~~~i~~l~~~~~~i~~~~~~~~----~~~~~~~~~~gi~~~~~e-~~~~~~~~~~l~-~l~~~a~ 142 (384)
T 1l7d_A 69 DVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTN----RPVVEALTKRKITAYAME-LMPRISRAQSMD-ILSSQSN 142 (384)
T ss_dssp SEEEEEECCCCGGGSCCGGGGSCTTCEEEEECCGGGC----HHHHHHHHHTTCEEEEGG-GCCCSGGGGGGC-HHHHHHH
T ss_pred CEEEEecCcccccCCHHHHHhhccCCEEEEEecccCC----HHHHHHHHHCCCEEEEec-cccccccccccc-hhhHHHH
Confidence 4555555564 45566665 6889887777664 567999999999999842 111111111121 1112111
Q ss_pred cchhhHHHHhCCcccc----cccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec--
Q 021995 91 FLPGHHQVISGEWNVA----GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-- 164 (304)
Q Consensus 91 ~~~~~~~~~~~~w~~~----~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-- 164 (304)
+ ..+..+..+.|... .......++.|++|+|+|+|.+|..+++.++.+|++|+++|+++...+.++++|....
T Consensus 143 ~-ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i 221 (384)
T 1l7d_A 143 L-AGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITV 221 (384)
T ss_dssp H-HHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC
T ss_pred H-HHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEee
Confidence 1 11112222222110 0000113689999999999999999999999999999999998877677777776543
Q ss_pred CC---------------------------HHhhcCcCCEEEEcC--CCChhhhccccHHHHhcCCCCCEEEEcC--CCc
Q 021995 165 ED---------------------------LDTMLPKCDIVVVNT--PLTEKTRGMFDKDRIAKMKKGVLIVNNA--RGA 212 (304)
Q Consensus 165 ~~---------------------------l~ell~~aDvVi~~~--p~~~~t~~~i~~~~l~~mk~g~ilVn~~--rg~ 212 (304)
+. ++++++++|+|+.|+ |..+ +.++++++.++.||+|+++||++ ||.
T Consensus 222 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~~-~~~li~~~~l~~mk~g~vivdva~~~gg 299 (384)
T 1l7d_A 222 DDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKP-APVLITEEMVTKMKPGSVIIDLAVEAGG 299 (384)
T ss_dssp -----------------------CCHHHHHHHHHTTCSEEEECCCCTTSC-CCCCSCHHHHTTSCTTCEEEETTGGGTC
T ss_pred cccccccccccccchhhcCHHHHhhhHHHHHHHhCCCCEEEECCccCCCC-CCeeeCHHHHhcCCCCCEEEEEecCCCC
Confidence 11 778889999999887 4432 45678899999999999999999 654
No 50
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.55 E-value=5.9e-15 Score=135.92 Aligned_cols=115 Identities=18% Similarity=0.238 Sum_probs=103.3
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhcccc--HHH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD--KDR 195 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~--~~~ 195 (304)
++||+||+|.||..+|++|...|++|++|||++.+.+.+.+.|+...+++.|+++.||+|++|+|..+..+.++. ...
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 589999999999999999999999999999988777777788999899999999999999999999888877763 247
Q ss_pred HhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEee
Q 021995 196 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGD 234 (304)
Q Consensus 196 l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lD 234 (304)
++.+++|.++||++..++-+...+.+.+.+..+. .+|
T Consensus 84 ~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~--~lD 120 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLA--MLD 120 (300)
T ss_dssp TTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCE--EEE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEe
Confidence 7889999999999999999999999999998887 566
No 51
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.55 E-value=1e-14 Score=134.00 Aligned_cols=115 Identities=13% Similarity=0.114 Sum_probs=99.9
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHHHHh
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIA 197 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~l~ 197 (304)
++|||||+|.||..+|++|...|++|++|||++.+.+.+.+.|+...+++.|+++++|+|++|+|..+..+.++..+.+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~ 85 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVE 85 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHh
Confidence 58999999999999999999999999999999877777777888888999999999999999999888888888888999
Q ss_pred cCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEee
Q 021995 198 KMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGD 234 (304)
Q Consensus 198 ~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lD 234 (304)
.++++.++||++....-+...+.+.+.+..+. .+|
T Consensus 86 ~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~--~ld 120 (297)
T 4gbj_A 86 KLGKDGVHVSMSTISPETSRQLAQVHEWYGAH--YVG 120 (297)
T ss_dssp HHCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEE
T ss_pred hcCCCeEEEECCCCChHHHHHHHHHHHhcCCc--eec
Confidence 99999999999999999999999999998887 555
No 52
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.50 E-value=1.9e-13 Score=126.51 Aligned_cols=165 Identities=12% Similarity=0.022 Sum_probs=109.4
Q ss_pred HhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCC--eEEEEcCCCCChhHHHhcCc--eecCCHHh-hcCc
Q 021995 99 ISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQLEKETGA--KFEEDLDT-MLPK 173 (304)
Q Consensus 99 ~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~--~V~~~dr~~~~~~~~~~~g~--~~~~~l~e-ll~~ 173 (304)
..+.|.....+. ..++..++|||||+|.||..+|+.|+..|+ +|++||+++...+.+.+.|+ ....++++ ++++
T Consensus 16 ~~~~~~~~~~~~-~~~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~ 94 (314)
T 3ggo_A 16 PRGSHMKNIIKI-LKSLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFS 94 (314)
T ss_dssp --------------CCCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGC
T ss_pred ccccCcCcCCch-hhhcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhcc
Confidence 445564433321 224456899999999999999999999999 99999998765666667776 44568888 8999
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCC---CCCCCCCccCC
Q 021995 174 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQ---PAPKDHPWRYM 250 (304)
Q Consensus 174 aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~e---p~~~~~~l~~~ 250 (304)
||+|++|+|... +..++ ++..+.+++++++++++..+....+++.+.+...-+.+. -++..| |......|+..
T Consensus 95 aDvVilavp~~~-~~~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~~~v~~h--Pm~G~e~sG~~~A~~~Lf~g 170 (314)
T 3ggo_A 95 PDFVMLSSPVRT-FREIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGGH--PIAGTEKSGVEYSLDNLYEG 170 (314)
T ss_dssp CSEEEECSCGGG-HHHHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEECEE--ECCCCCCCSGGGCCTTTTTT
T ss_pred CCEEEEeCCHHH-HHHHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCCCEEecC--cccCCcccchhhhhhhhhcC
Confidence 999999999653 33444 567778999999999998776556677776654222211 223222 33344567777
Q ss_pred CCeEEccCCCcCCHHHHHH
Q 021995 251 PNQAMTPHVSGTTIDAQLR 269 (304)
Q Consensus 251 ~nv~lTPHia~~t~e~~~~ 269 (304)
..+++||+-+ .+.+..++
T Consensus 171 ~~~il~~~~~-~~~~~~~~ 188 (314)
T 3ggo_A 171 KKVILTPTKK-TDKKRLKL 188 (314)
T ss_dssp CEEEECCCTT-SCHHHHHH
T ss_pred CEEEEEeCCC-CCHHHHHH
Confidence 8899999844 34444443
No 53
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.47 E-value=1.6e-13 Score=125.66 Aligned_cols=111 Identities=14% Similarity=0.190 Sum_probs=99.8
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHHHH
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRI 196 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~l 196 (304)
.++|||||+|.||..+|+.|...|++|++|||++.+.+...+.|+....+++++++ +|+|++|+|..+.++.++ ++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~ 92 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELA 92 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHH
Confidence 36899999999999999999999999999999988777777888888889999999 999999999877777766 6788
Q ss_pred hcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 197 AKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 197 ~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
+.++++.++||+++......+.+.+.+.+..+.
T Consensus 93 ~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~ 125 (296)
T 3qha_A 93 GHAKPGTVIAIHSTISDTTAVELARDLKARDIH 125 (296)
T ss_dssp TTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCE
T ss_pred HhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCE
Confidence 889999999999999999999999999887665
No 54
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.46 E-value=6.2e-14 Score=129.10 Aligned_cols=119 Identities=14% Similarity=0.089 Sum_probs=101.3
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccH
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 193 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~ 193 (304)
++..++|||||+|.||..+|+.|...|++|++|||++.+.+.+.+.|.....++++++++||+|++++|....++.++..
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 85 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLGM 85 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhcc
Confidence 45678999999999999999999999999999999876666666678887889999999999999999987777777643
Q ss_pred HHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEee
Q 021995 194 DRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGD 234 (304)
Q Consensus 194 ~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lD 234 (304)
+.+..+++|.++||+++....+...+.+.+.+..+. .+|
T Consensus 86 ~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~--~vd 124 (306)
T 3l6d_A 86 PGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGH--YVK 124 (306)
T ss_dssp TTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCE--EEE
T ss_pred cchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCe--EEe
Confidence 345667899999999999999999999999887665 445
No 55
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.46 E-value=1.3e-13 Score=127.77 Aligned_cols=116 Identities=20% Similarity=0.172 Sum_probs=99.8
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccH
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 193 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~ 193 (304)
....++|||||+|.||..+|+.|...|++|++|||++.+.+...+.|+....++++++++||+|++++|....++.++..
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 107 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFA 107 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTT
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcc
Confidence 34567999999999999999999999999999999876556666668887889999999999999999977676666532
Q ss_pred -HHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 194 -DRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 194 -~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
+.++.++++.++||++++.+.+.+.+.+.+.+..+.
T Consensus 108 ~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~ 144 (320)
T 4dll_A 108 QGVAAAMKPGSLFLDMASITPREARDHAARLGALGIA 144 (320)
T ss_dssp TCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred hhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCE
Confidence 567789999999999999999999999999887666
No 56
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.45 E-value=1.2e-13 Score=127.37 Aligned_cols=117 Identities=14% Similarity=0.101 Sum_probs=100.8
Q ss_pred cccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccc-
Q 021995 113 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF- 191 (304)
Q Consensus 113 ~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i- 191 (304)
.....++|||||+|.||..+|+.|...|++|++|||++.+.+...+.|+....++++++++||+|++|+|....++.++
T Consensus 17 ~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~ 96 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVF 96 (310)
T ss_dssp -CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred ccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHh
Confidence 3456689999999999999999999999999999998877777777888888899999999999999999776666655
Q ss_pred -cHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 192 -DKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 192 -~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
..+.++.++++.++||+++..+...+.+.+.+.+..+.
T Consensus 97 ~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~ 135 (310)
T 3doj_A 97 DKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGR 135 (310)
T ss_dssp STTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred CchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 24566789999999999999999999999999887665
No 57
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.45 E-value=2.5e-13 Score=125.44 Aligned_cols=129 Identities=12% Similarity=0.135 Sum_probs=92.8
Q ss_pred HHHHhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCC--CChhHHHhcCceecCCHHhhcC
Q 021995 96 HQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVK--MDPQLEKETGAKFEEDLDTMLP 172 (304)
Q Consensus 96 ~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~--~~~~~~~~~g~~~~~~l~ell~ 172 (304)
+..+.+.|.+............++|||||+|.||..+|+.|...|+ +|++||+++ ...+...+.|+....+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~ 82 (312)
T 3qsg_A 3 HHHHHSSGVDLGTENLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAG 82 (312)
T ss_dssp ----------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHH
T ss_pred cccccccccccCcccccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHh
Confidence 3455666654321112223456799999999999999999999999 999999963 4445556678888889999999
Q ss_pred cCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcC
Q 021995 173 KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 226 (304)
Q Consensus 173 ~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g 226 (304)
+||+|++|+|....... + .+..+.++++.++||+++.......++.+.+.+.
T Consensus 83 ~aDvVi~~vp~~~~~~~-~-~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~ 134 (312)
T 3qsg_A 83 ECDVIFSLVTAQAALEV-A-QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRH 134 (312)
T ss_dssp HCSEEEECSCTTTHHHH-H-HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHH
T ss_pred cCCEEEEecCchhHHHH-H-HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhh
Confidence 99999999997765543 2 6777889999999999999999999999998876
No 58
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.44 E-value=1.2e-12 Score=118.55 Aligned_cols=141 Identities=11% Similarity=0.063 Sum_probs=104.7
Q ss_pred CEEEEEeeChhhHHHHHHhccCCC--eEEEEcCCCCChhHHHhcCce--ecCCHHhhcC-cCCEEEEcCCCChhhhcccc
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQLEKETGAK--FEEDLDTMLP-KCDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~--~V~~~dr~~~~~~~~~~~g~~--~~~~l~ell~-~aDvVi~~~p~~~~t~~~i~ 192 (304)
++|||||+|.||..+++.|...|+ +|++||+++...+.+.+.|.. ...+++++++ ++|+|++|+|.. .+..++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~- 79 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIA- 79 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH-HHHHHH-
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH-HHHHHH-
Confidence 589999999999999999999898 999999976555555566763 3457888898 999999999954 344444
Q ss_pred HHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCC---CCCCCCCccCCCCeEEccCCCcC
Q 021995 193 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQ---PAPKDHPWRYMPNQAMTPHVSGT 262 (304)
Q Consensus 193 ~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~e---p~~~~~~l~~~~nv~lTPHia~~ 262 (304)
.+..+.++++.++++++++.....+.+.+.+.++.+.+ .-++..| |....++++...+++++||.++.
T Consensus 80 ~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~v~~--~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~ 150 (281)
T 2g5c_A 80 KKLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGG--HPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTD 150 (281)
T ss_dssp HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEECE--EEECCCSCCSGGGCCSSTTTTCEEEECCCSSSC
T ss_pred HHHHhhCCCCcEEEECCCCcHHHHHHHHHhccccceee--ccccCCccCChhhhhhHHhCCCCEEEecCCCCC
Confidence 35667789999999999988777778888887642211 1223222 33344567777789999997754
No 59
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.43 E-value=1.9e-13 Score=124.36 Aligned_cols=112 Identities=13% Similarity=0.143 Sum_probs=98.7
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccc--cHHH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF--DKDR 195 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i--~~~~ 195 (304)
++|||||+|.||..+|+.|...|++|++|||++.+.+...+.|+....+++++++++|+|++|+|....++.++ .++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 68999999999999999999999999999998877777777788888899999999999999999766666665 2566
Q ss_pred HhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 196 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 196 l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
++.++++.++||+++....+...+.+.+.+..+.
T Consensus 82 ~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~ 115 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGR 115 (287)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred hhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCE
Confidence 7889999999999999999999999999887665
No 60
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.42 E-value=3.1e-13 Score=127.29 Aligned_cols=121 Identities=14% Similarity=0.183 Sum_probs=102.6
Q ss_pred cCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcC---CEEEEcCCCChhhhccc
Q 021995 115 LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKC---DIVVVNTPLTEKTRGMF 191 (304)
Q Consensus 115 L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~a---DvVi~~~p~~~~t~~~i 191 (304)
+.+++|||||+|.||..+|+.|...|++|.+|||++.+.+.+.+.|+....+++++++.+ |+|++++|.. .++.++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl 98 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML 98 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH
Confidence 567899999999999999999999999999999987666666666887778999999888 9999999977 666666
Q ss_pred cHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCC
Q 021995 192 DKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWN 237 (304)
Q Consensus 192 ~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~ 237 (304)
.+.++.++++.++||++++...+...+.+.+.+..+......|+.
T Consensus 99 -~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsG 143 (358)
T 4e21_A 99 -QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSG 143 (358)
T ss_dssp -HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEEC
T ss_pred -HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCC
Confidence 577888999999999999999999999999999888754444443
No 61
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.41 E-value=2.4e-13 Score=124.40 Aligned_cols=112 Identities=18% Similarity=0.247 Sum_probs=96.5
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhcccc--HHH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD--KDR 195 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~--~~~ 195 (304)
++|||||+|.||..+|+.|...|++|++|||++...+...+.|+....+++++++++|+|++|+|....++.++. .+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~ 83 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCG
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhH
Confidence 689999999999999999999999999999987666666667888888999999999999999997766666653 156
Q ss_pred HhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 196 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 196 l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
++.++++.++||++++.....+.+.+.+.+..+.
T Consensus 84 ~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~ 117 (302)
T 2h78_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLA 117 (302)
T ss_dssp GGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCC
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 6789999999999999999999999999876554
No 62
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.40 E-value=2.1e-13 Score=124.07 Aligned_cols=112 Identities=14% Similarity=0.110 Sum_probs=97.5
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhcccc--HHH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD--KDR 195 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~--~~~ 195 (304)
++|||||+|.||..+|+.|...|++|++|||++.+.+...+.|+....++++++++||+|++|+|..+.++.++. ++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 479999999999999999999999999999988777777777888888999999999999999997766666551 456
Q ss_pred HhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 196 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 196 l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
++.++++.++||++++...+...+.+.+.+..+.
T Consensus 82 ~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~ 115 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGR 115 (287)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred hhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 6788999999999999999999999998886655
No 63
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.39 E-value=3.1e-13 Score=124.03 Aligned_cols=113 Identities=16% Similarity=0.064 Sum_probs=96.3
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCcee-cCCHHhhcCcCCEEEEcCCCChhhhcccc--H
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF-EEDLDTMLPKCDIVVVNTPLTEKTRGMFD--K 193 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-~~~l~ell~~aDvVi~~~p~~~~t~~~i~--~ 193 (304)
.++|||||+|.||..+|+.|...|++|++|||++.+.+...+.|... ..++++++++||+|++++|..+..+.++. +
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 46899999999999999999999999999999876656666667766 67899999999999999997666666542 4
Q ss_pred HHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 194 DRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 194 ~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
+.++.++++.++||+++........+.+.+.+..+.
T Consensus 87 ~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~ 122 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLN 122 (303)
T ss_dssp CCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCE
T ss_pred hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCe
Confidence 566788999999999999999999999999887655
No 64
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.36 E-value=7.4e-12 Score=113.86 Aligned_cols=140 Identities=12% Similarity=0.074 Sum_probs=102.3
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhc-------------------------CceecCCHHhhcC
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET-------------------------GAKFEEDLDTMLP 172 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~-------------------------g~~~~~~l~ell~ 172 (304)
++|+|||.|.||..+|+.+...|++|++||+++...+...+. .+....++++.++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 689999999999999999999999999999976443333221 1345578889999
Q ss_pred cCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCC
Q 021995 173 KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPN 252 (304)
Q Consensus 173 ~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~n 252 (304)
+||+|+.++|.+.+....+-++..+.+++++++++.+.+- ...++.+++... ...+++..|. |.+..+.
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~--~~~~la~~~~~~-~~~ig~h~~~--------p~~~~~l 153 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTL--LPSDLVGYTGRG-DKFLALHFAN--------HVWVNNT 153 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS--CHHHHHHHHSCG-GGEEEEEECS--------STTTSCE
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCC--CHHHHHhhcCCC-cceEEEccCC--------CcccCce
Confidence 9999999999887676666677888899999999665553 456777777443 3445555442 3456677
Q ss_pred eEEccCCCcCCHHHHHH
Q 021995 253 QAMTPHVSGTTIDAQLR 269 (304)
Q Consensus 253 v~lTPHia~~t~e~~~~ 269 (304)
+.++||-. .+.+..++
T Consensus 154 vevv~~~~-t~~~~~~~ 169 (283)
T 4e12_A 154 AEVMGTTK-TDPEVYQQ 169 (283)
T ss_dssp EEEEECTT-SCHHHHHH
T ss_pred EEEEeCCC-CCHHHHHH
Confidence 88999843 34454443
No 65
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.36 E-value=2.4e-12 Score=117.04 Aligned_cols=142 Identities=14% Similarity=0.140 Sum_probs=102.6
Q ss_pred CCEEEEEeeChhhHHHHHHhccC--CCeEEEEcCCCCChhHHHhcCc--eecCCHHhhcCcCCEEEEcCCCChhhhcccc
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPF--NCNLLYHDRVKMDPQLEKETGA--KFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~--G~~V~~~dr~~~~~~~~~~~g~--~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~ 192 (304)
-++|||||+|.||..+++.|... |++|++||+++...+...+.|. ....+++++++++|+|++++|.... ..++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~-~~v~- 83 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKKT-IDFI- 83 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHHH-HHHH-
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHHH-HHHH-
Confidence 36899999999999999999865 7899999997654444555665 3456788888999999999995433 4444
Q ss_pred HHHHhc-CCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEee---cCCC---CCCCCCCCccCCCCeEEccCCCcC
Q 021995 193 KDRIAK-MKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGD---VWNP---QPAPKDHPWRYMPNQAMTPHVSGT 262 (304)
Q Consensus 193 ~~~l~~-mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lD---V~~~---ep~~~~~~l~~~~nv~lTPHia~~ 262 (304)
.+..+. ++++.+++++++......+.+.+.+.+..+. .++ ++.. .|......++..+.++++||.++.
T Consensus 84 ~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~--~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~ 158 (290)
T 3b1f_A 84 KILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQ--FVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTK 158 (290)
T ss_dssp HHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCE--EEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCC
T ss_pred HHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCE--EEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCC
Confidence 456667 8999999999998877778888877752333 233 2111 344444567777779999987654
No 66
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.35 E-value=4.7e-12 Score=118.76 Aligned_cols=108 Identities=21% Similarity=0.259 Sum_probs=91.2
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcC-cCCEEEEcCCCChhhhcccc
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLP-KCDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~-~aDvVi~~~p~~~~t~~~i~ 192 (304)
+|.|+||+|+|+|+||+.+|++|+++|++|+++|++....+...+++++.. ++++++. +||+++.| .+.+.|+
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~-----A~~~~I~ 245 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPC-----AMGGVIT 245 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEEC-----SCSCCBC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEe-ChHHhhcCccceecHh-----HHHhhcC
Confidence 699999999999999999999999999999999986432334455677665 6788887 89999854 4678999
Q ss_pred HHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 193 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 193 ~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
.+.++.|| ..+++|.+++++.++++ .++|+++.+.
T Consensus 246 ~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gIl 280 (355)
T 1c1d_A 246 TEVARTLD-CSVVAGAANNVIADEAA-SDILHARGIL 280 (355)
T ss_dssp HHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTCE
T ss_pred HHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCEE
Confidence 99999998 78999999999999777 5888888776
No 67
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.34 E-value=3.7e-12 Score=117.87 Aligned_cols=109 Identities=14% Similarity=0.050 Sum_probs=90.7
Q ss_pred CCEEEEEeeChhhHHHHHHhccCC-CeEEEEcCCCC-------ChhHHHhcCceecC-CHHhhcCcCCEEEEcCCCChhh
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFN-CNLLYHDRVKM-------DPQLEKETGAKFEE-DLDTMLPKCDIVVVNTPLTEKT 187 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G-~~V~~~dr~~~-------~~~~~~~~g~~~~~-~l~ell~~aDvVi~~~p~~~~t 187 (304)
.++|||||+|.||..+|+.|...| ++|++||+++. ..+...+.|+ .. ++++++++||+|++|+|.....
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~--~~~s~~e~~~~aDvVi~avp~~~~~ 101 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV--EPLDDVAGIACADVVLSLVVGAATK 101 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC--EEESSGGGGGGCSEEEECCCGGGHH
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC--CCCCHHHHHhcCCEEEEecCCHHHH
Confidence 368999999999999999999999 99999999752 1222334465 45 7889999999999999977665
Q ss_pred hccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 188 RGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 188 ~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
..+ .+..+.++++.++||+++........+.+.+.+..+.
T Consensus 102 ~~~--~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~ 141 (317)
T 4ezb_A 102 AVA--ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGS 141 (317)
T ss_dssp HHH--HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCE
T ss_pred HHH--HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 544 6778889999999999999999999999999887665
No 68
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.29 E-value=2.7e-12 Score=120.04 Aligned_cols=140 Identities=14% Similarity=0.076 Sum_probs=97.8
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCc----CCEEEEcCCCChhhhcccc
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPK----CDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~----aDvVi~~~p~~~~t~~~i~ 192 (304)
-++|||||+|.||..+|+.|+..|++|++||+++...+.+.+.|+....++++++++ +|+|++|+|. ..+..++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl- 85 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLL- 85 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHH-
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHH-
Confidence 357999999999999999999999999999998766666777888766788887764 6999999994 3555555
Q ss_pred HHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEE-eecCCCC---CCCCCCCccCCCCeEEccCCCc
Q 021995 193 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYS-GDVWNPQ---PAPKDHPWRYMPNQAMTPHVSG 261 (304)
Q Consensus 193 ~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~-lDV~~~e---p~~~~~~l~~~~nv~lTPHia~ 261 (304)
++. ..++++++++|++..+....+++.+.+. ...... --++-.| |......|+....+++||+-..
T Consensus 86 ~~l-~~~~~~~iv~Dv~Svk~~i~~~~~~~~~--~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~ 155 (341)
T 3ktd_A 86 DAV-HTHAPNNGFTDVVSVKTAVYDAVKARNM--QHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLF 155 (341)
T ss_dssp HHH-HHHCTTCCEEECCSCSHHHHHHHHHTTC--GGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGGT
T ss_pred HHH-HccCCCCEEEEcCCCChHHHHHHHHhCC--CCcEecCCccccccccchhhhhhHHhcCCeEEEEeCCCC
Confidence 333 3458999999998766544444444332 122111 1122222 2223456777778999997543
No 69
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.26 E-value=1.2e-11 Score=120.61 Aligned_cols=119 Identities=11% Similarity=0.113 Sum_probs=97.8
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcC-----ceecCCHHhhcC---cCCEEEEcCCCChhhh
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG-----AKFEEDLDTMLP---KCDIVVVNTPLTEKTR 188 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g-----~~~~~~l~ell~---~aDvVi~~~p~~~~t~ 188 (304)
.++|||||+|.||..+|+.|...|++|.+|||++.+.+...+.+ +....+++++++ ++|+|++++|..+.++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 83 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD 83 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHH
Confidence 35899999999999999999999999999999875555444432 233568888876 5999999999887777
Q ss_pred ccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecC
Q 021995 189 GMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVW 236 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~ 236 (304)
.++ .+..+.|++|.++||++++...+...+.+.+.+..+......|.
T Consensus 84 ~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVs 130 (484)
T 4gwg_A 84 DFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVS 130 (484)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCcc
Confidence 776 67888999999999999999999999999999887764443443
No 70
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.26 E-value=4.2e-12 Score=115.65 Aligned_cols=112 Identities=19% Similarity=0.283 Sum_probs=93.4
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhcccc--HHH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD--KDR 195 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~--~~~ 195 (304)
++|+|||+|.||..+++.|...|++|.+||+++...+...+.|+....+++++++++|+|++++|....++.++. ++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 489999999999999999998999999999976555555556777777899999999999999997666666652 355
Q ss_pred HhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 196 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 196 l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
.+.++++.++|+++.+...+.+.|.+.+.+..+.
T Consensus 86 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~ 119 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIAPLASREISDALKAKGVE 119 (299)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 6778999999999999988888999988875444
No 71
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.26 E-value=1.1e-11 Score=120.89 Aligned_cols=114 Identities=11% Similarity=0.115 Sum_probs=95.1
Q ss_pred cCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhc----CceecCCHHhhcCc---CCEEEEcCCCChhh
Q 021995 115 LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET----GAKFEEDLDTMLPK---CDIVVVNTPLTEKT 187 (304)
Q Consensus 115 L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~----g~~~~~~l~ell~~---aDvVi~~~p~~~~t 187 (304)
++.++|||||+|.||+.+|+.|...|++|.+|||++...+...+. |+....+++++++. +|+|++++|..+.+
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 92 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGT 92 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHH
Confidence 566789999999999999999999999999999986544444433 67777789998876 99999999987777
Q ss_pred hccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 188 RGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 188 ~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
+.++ ++..+.+++|.++||++.|...+...+.+.+.+..+.
T Consensus 93 ~~vl-~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~ 133 (480)
T 2zyd_A 93 DAAI-DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFN 133 (480)
T ss_dssp HHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
Confidence 7777 4677889999999999999999988999989876555
No 72
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.24 E-value=1.2e-11 Score=116.78 Aligned_cols=181 Identities=14% Similarity=0.099 Sum_probs=117.7
Q ss_pred ee-ccccccchhchhHHHhcC-CCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEc---CCCC-------hhHHHHHHH
Q 021995 14 FA-SSGFLRSSSRFSRHYASS-GSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEV---TGSN-------VVSVAEDEL 81 (304)
Q Consensus 14 ~~-~~~~~~~~~~~~~~l~~~-~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~---~g~~-------~~~vAE~al 81 (304)
.| -+-++.-..+..+++... +...+++.+....+ ..-++++.++||+...- |... -.+++|.+=
T Consensus 82 ~~~adiIlkVk~p~~~e~~~l~~g~~l~~~lh~~~~----~~l~~~l~~~~it~ia~E~i~~~~~~~~l~~l~~~s~iAG 157 (381)
T 3p2y_A 82 PWPADVVVKVNPPTSDEISQLKPGSVLIGFLAPRTQ----PELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVAG 157 (381)
T ss_dssp CTTSSEEECSSCCCHHHHTTSCTTCEEEECCCTTTC----HHHHHHHHHTTCEEEEGGGCCSSGGGGGGCHHHHHHHHHH
T ss_pred eecCCEEEEeCCCChhHHhhccCCCEEEEEeccccC----HHHHHHHHHCCCeEEEeeccccccccccceeecchhHHHH
Confidence 45 334455555566777554 44555554443332 22246788999998643 2211 134455543
Q ss_pred HHHH-HHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcC
Q 021995 82 MRIL-ILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG 160 (304)
Q Consensus 82 ~~~L-~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g 160 (304)
.+.. ..+..+.. ... ........+.+++|+|||+|.||..+++.++++|++|+++|+++...+.+.+.|
T Consensus 158 y~Av~~aa~~l~~---------~~~-~l~~~~~~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lG 227 (381)
T 3p2y_A 158 YKAVLLGASLSTR---------FVP-MLTTAAGTVKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVG 227 (381)
T ss_dssp HHHHHHHHHHCSS---------CSS-CEECSSCEECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTT
T ss_pred HHHHHHHHHHhhh---------hhh-hhhcccCCcCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC
Confidence 2221 11121111 100 000112357899999999999999999999999999999999887666777776
Q ss_pred ceec-------------------------CCHHhhcCcCCEEEEcC--CCChhhhccccHHHHhcCCCCCEEEEcC
Q 021995 161 AKFE-------------------------EDLDTMLPKCDIVVVNT--PLTEKTRGMFDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 161 ~~~~-------------------------~~l~ell~~aDvVi~~~--p~~~~t~~~i~~~~l~~mk~g~ilVn~~ 209 (304)
.++. .++++.++++|+|+.++ |.. .+..+++++.++.||+|+++||++
T Consensus 228 a~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l~~aDIVI~tv~iPg~-~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 228 AQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAITKFDIVITTALVPGR-PAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp CEECCCC-------------CHHHHHHHHHHHHHHHTTCSEEEECCCCTTS-CCCCCBCHHHHHTSCTTCEEEETT
T ss_pred CeEEeccccccccccchhhhhHHHHhhhHHHHHHHHhcCCEEEECCCCCCc-ccceeecHHHHhcCCCCcEEEEEe
Confidence 6543 24678999999999875 542 356789999999999999999998
No 73
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.24 E-value=1.1e-11 Score=113.04 Aligned_cols=112 Identities=17% Similarity=0.224 Sum_probs=92.8
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhcccc--HHH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD--KDR 195 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~--~~~ 195 (304)
++|+|||+|.||+.+++.|...|++|++||+++...+...+.|+....+++++++++|+|++++|....++.++. .+.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 84 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGV 84 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchH
Confidence 589999999999999999998999999999976544444455777777899999999999999997766666664 356
Q ss_pred HhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 196 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 196 l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
.+.++++.++|++++|...+.+.|.+.+.+..+.
T Consensus 85 ~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~ 118 (301)
T 3cky_A 85 LSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGID 118 (301)
T ss_dssp HHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 6778999999999999877888898888775443
No 74
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.23 E-value=1e-11 Score=112.70 Aligned_cols=111 Identities=15% Similarity=0.119 Sum_probs=91.8
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccH--HH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK--DR 195 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~--~~ 195 (304)
++|+|||+|.||+.+++.|...|++|++|| ++...+...+.|+....+++++++++|+|++++|....+..++.. +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 82 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGC 82 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhH
Confidence 589999999999999999999999999999 776666666667776778999999999999999976656555532 44
Q ss_pred HhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 196 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 196 l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
.+.++++.++|+++.+...+.+.+.+.+.+..+.
T Consensus 83 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~ 116 (295)
T 1yb4_A 83 AKTSLQGKTIVDMSSISPIETKRFAQRVNEMGAD 116 (295)
T ss_dssp TTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 5678999999999999888888999998874433
No 75
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.23 E-value=1.8e-11 Score=116.46 Aligned_cols=181 Identities=17% Similarity=0.177 Sum_probs=117.0
Q ss_pred cccccchhchhHHHhcC-CCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEc---CCCC-------hhHHHHHHHHHH-
Q 021995 17 SGFLRSSSRFSRHYASS-GSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEV---TGSN-------VVSVAEDELMRI- 84 (304)
Q Consensus 17 ~~~~~~~~~~~~~l~~~-~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~---~g~~-------~~~vAE~al~~~- 84 (304)
+-++.-..+..+++... +.-.+++.+....+ ..-++.+.++||+...- |... -.+++|.+=.+.
T Consensus 92 diIlkVk~p~~~e~~~l~~g~~l~~~lh~~~~----~~l~~~l~~~~it~ia~E~i~r~~ra~~l~~ls~~s~iAGy~Av 167 (405)
T 4dio_A 92 DVILKVRRPSAQEISGYRSGAVVIAIMDPYGN----EEAISAMAGAGLTTFAMELMPRITRAQSMDVLSSQANLAGYQAV 167 (405)
T ss_dssp SEEEEEECCCTTTGGGSCTTCEEEEECCCTTC----HHHHHHHHHTTCEEEEGGGSCCSGGGGGGCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChhHHhhcCCCcEEEEEeccccC----HHHHHHHHHCCCeEEEeeccccccccCccceecchhHHHHHHHH
Confidence 34444455555666544 45556665544432 22246788999998643 3211 134455443221
Q ss_pred HHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec
Q 021995 85 LILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE 164 (304)
Q Consensus 85 L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~ 164 (304)
+..+..+... +. .....-..+.+.+|+|+|+|.+|..+++.++++|++|+++|+++...+.+.++|..+.
T Consensus 168 ~~aa~~l~~~--------~~--~l~t~~g~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~ 237 (405)
T 4dio_A 168 IDAAYEYDRA--------LP--MMMTAAGTVPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFI 237 (405)
T ss_dssp HHHHHHCSSC--------SS--CEEETTEEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEEC
T ss_pred HHHHHHhHhh--------hc--hhhccCCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCcee
Confidence 1112211110 11 0001112578999999999999999999999999999999998866666666665421
Q ss_pred -----------------------------CCHHhhcCcCCEEEEcC--CCChhhhccccHHHHhcCCCCCEEEEcC--CC
Q 021995 165 -----------------------------EDLDTMLPKCDIVVVNT--PLTEKTRGMFDKDRIAKMKKGVLIVNNA--RG 211 (304)
Q Consensus 165 -----------------------------~~l~ell~~aDvVi~~~--p~~~~t~~~i~~~~l~~mk~g~ilVn~~--rg 211 (304)
.+++++++++|+|+.++ |.. ....+++++.++.||+|+++||++ +|
T Consensus 238 ~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~-~ap~Lvt~emv~~Mk~GsVIVDvA~d~G 316 (405)
T 4dio_A 238 AVEDEEFKAAETAGGYAKEMSGEYQVKQAALVAEHIAKQDIVITTALIPGR-PAPRLVTREMLDSMKPGSVVVDLAVERG 316 (405)
T ss_dssp CCCC-----------------CHHHHHHHHHHHHHHHTCSEEEECCCCSSS-CCCCCBCHHHHTTSCTTCEEEETTGGGT
T ss_pred ecccccccccccccchhhhcchhhhhhhHhHHHHHhcCCCEEEECCcCCCC-CCCEEecHHHHhcCCCCCEEEEEeCCCC
Confidence 15678899999999875 533 356789999999999999999998 44
Q ss_pred c
Q 021995 212 A 212 (304)
Q Consensus 212 ~ 212 (304)
.
T Consensus 317 G 317 (405)
T 4dio_A 317 G 317 (405)
T ss_dssp C
T ss_pred C
Confidence 4
No 76
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.22 E-value=1.2e-10 Score=105.01 Aligned_cols=143 Identities=15% Similarity=0.127 Sum_probs=97.9
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCce--ecCCHHhhcCcCCEEEEcCCCChhhhccccHHH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAK--FEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 195 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~--~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~ 195 (304)
++|+|||+|.||+.+++.|...|++|++||+++...+...+.|.. ...+++++ +++|+|++++|.. .+..++ .+.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~-~~~~~~-~~l 77 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQ-LILPTL-EKL 77 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHH-HHHHHH-HHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHH-HHHHHH-HHH
Confidence 479999999999999999999999999999976555555555652 35678888 9999999999943 344444 456
Q ss_pred HhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCC---CCCCCCCCccCCCCeEEccCCCcCCHHHH
Q 021995 196 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNP---QPAPKDHPWRYMPNQAMTPHVSGTTIDAQ 267 (304)
Q Consensus 196 l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~---ep~~~~~~l~~~~nv~lTPHia~~t~e~~ 267 (304)
.+.++++.++|+++..+....+.+.+.+. ++.+. .-++.. .|....+.++..+.++++|+-++ +.+..
T Consensus 78 ~~~~~~~~~vv~~~~~~~~~~~~~~~~~~--~~~~~-~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~-~~~~~ 148 (279)
T 2f1k_A 78 IPHLSPTAIVTDVASVKTAIAEPASQLWS--GFIGG-HPMAGTAAQGIDGAEENLFVNAPYVLTPTEYT-DPEQL 148 (279)
T ss_dssp GGGSCTTCEEEECCSCCHHHHHHHHHHST--TCEEE-EECCCCSCSSGGGCCTTTTTTCEEEEEECTTC-CHHHH
T ss_pred HhhCCCCCEEEECCCCcHHHHHHHHHHhC--CEeec-CcccCCccCCHHHHhHHHhCCCcEEEecCCCC-CHHHH
Confidence 67789999999998777666666655543 22221 122211 23333334556667889997543 33433
No 77
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.22 E-value=1.2e-12 Score=122.36 Aligned_cols=137 Identities=18% Similarity=0.191 Sum_probs=95.4
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCC-hhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhcccc
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMD-PQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~-~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~ 192 (304)
.+.+++|||||+|.||+.+|+.|+..|++|+++++++.. .+.+.+.|+... ++++++++||+|++++|.... ..++.
T Consensus 13 ~l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~-~~~e~~~~aDvVilavp~~~~-~~v~~ 90 (338)
T 1np3_A 13 IIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA-DVKTAVAAADVVMILTPDEFQ-GRLYK 90 (338)
T ss_dssp HHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE-CHHHHHHTCSEEEECSCHHHH-HHHHH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc-cHHHHHhcCCEEEEeCCcHHH-HHHHH
Confidence 578899999999999999999999999999999997644 455566777665 888999999999999996533 44544
Q ss_pred HHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCC---ccC---CCCeEEccCCCc
Q 021995 193 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHP---WRY---MPNQAMTPHVSG 261 (304)
Q Consensus 193 ~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~---l~~---~~nv~lTPHia~ 261 (304)
++..+.+++++++++++ | ++. ....+. ....+||+...|..+.+. ++. -.++++|||...
T Consensus 91 ~~i~~~l~~~~ivi~~~-g--v~~--~~~~~~----~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~~ 156 (338)
T 1np3_A 91 EEIEPNLKKGATLAFAH-G--FSI--HYNQVV----PRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQDA 156 (338)
T ss_dssp HHTGGGCCTTCEEEESC-C--HHH--HTTSSC----CCTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEECS
T ss_pred HHHHhhCCCCCEEEEcC-C--chh--HHHhhc----CCCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCCC
Confidence 35667799999999884 3 222 111111 112234544445433332 333 456889998643
No 78
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.22 E-value=2.9e-11 Score=118.45 Aligned_cols=112 Identities=11% Similarity=0.152 Sum_probs=95.1
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHh-----cCceecCCHHhhcCc---CCEEEEcCCCChhhh
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-----TGAKFEEDLDTMLPK---CDIVVVNTPLTEKTR 188 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~-----~g~~~~~~l~ell~~---aDvVi~~~p~~~~t~ 188 (304)
..+|||||+|.||..+|+.|...|++|.+|||++.+.+...+ .|+....+++++++. +|+|++++|..+.++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 89 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVD 89 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH
Confidence 358999999999999999999999999999998765555544 466667789888776 999999999877777
Q ss_pred ccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 189 GMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
.++ ++..+.+++|.++|+++.+...+...+.+.+.+..+.
T Consensus 90 ~vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~ 129 (497)
T 2p4q_A 90 ALI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGIL 129 (497)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCc
Confidence 777 5677889999999999999999999999988876554
No 79
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.21 E-value=1.2e-11 Score=112.35 Aligned_cols=109 Identities=16% Similarity=0.231 Sum_probs=88.6
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccH--HH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK--DR 195 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~--~~ 195 (304)
++|+|||+|.||+.+++.|...|++|++|||++...+...+.|+....+++++++++|+|++++|....++.++.. ..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 3799999999999999999999999999999875555555667777778999999999999999977666665532 24
Q ss_pred HhcCCCCCEEEEcCCCchhchHHHHHHHHcC
Q 021995 196 IAKMKKGVLIVNNARGAIMDTQAVVDACSSG 226 (304)
Q Consensus 196 l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g 226 (304)
++.++++.++|+++..+..+...+.+.+.+.
T Consensus 81 ~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~ 111 (296)
T 2gf2_A 81 LKKVKKGSLLIDSSTIDPAVSKELAKEVEKM 111 (296)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred HhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 5578999999998888877777777777653
No 80
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=99.20 E-value=3.9e-11 Score=116.48 Aligned_cols=95 Identities=20% Similarity=0.271 Sum_probs=81.2
Q ss_pred cccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhcccc
Q 021995 113 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 113 ~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~ 192 (304)
..+.|++++|+|+|.||+.+|+.|+++|++|+++|+++.....+...+... .++++++..+|+++.+.. +.++++
T Consensus 261 ~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv-~~lee~~~~aDvVi~atG----~~~vl~ 335 (488)
T 3ond_A 261 VMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQV-LTLEDVVSEADIFVTTTG----NKDIIM 335 (488)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCGGGTTTTCSEEEECSS----CSCSBC
T ss_pred CcccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCcc-CCHHHHHHhcCEEEeCCC----Chhhhh
Confidence 468999999999999999999999999999999999765445555566654 488999999999997654 457888
Q ss_pred HHHHhcCCCCCEEEEcCCCc
Q 021995 193 KDRIAKMKKGVLIVNNARGA 212 (304)
Q Consensus 193 ~~~l~~mk~g~ilVn~~rg~ 212 (304)
.+.++.||++++++|++++.
T Consensus 336 ~e~l~~mk~gaiVvNaG~~~ 355 (488)
T 3ond_A 336 LDHMKKMKNNAIVCNIGHFD 355 (488)
T ss_dssp HHHHTTSCTTEEEEESSSTT
T ss_pred HHHHHhcCCCeEEEEcCCCC
Confidence 89999999999999999983
No 81
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.20 E-value=2.3e-11 Score=110.00 Aligned_cols=108 Identities=12% Similarity=0.141 Sum_probs=88.5
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHHHHh
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIA 197 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~l~ 197 (304)
++|+|||+|.||..+++.|.. |++|.+|||++...+...+.|+.... ++++++++|+|++|+|....+..++ ++..+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~-~~l~~ 78 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPTTREVYEVA-EALYP 78 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSSHHHHHHHH-HHHTT
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCChHHHHHHH-HHHHh
Confidence 479999999999999999999 99999999987554544444655554 7788889999999999766566655 55667
Q ss_pred cCCCCCEEEEcCCCchhchHHHHHHHHcCCc
Q 021995 198 KMKKGVLIVNNARGAIMDTQAVVDACSSGHI 228 (304)
Q Consensus 198 ~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i 228 (304)
.++++.++|+++.+...+.+.+.+.+.+..+
T Consensus 79 ~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~ 109 (289)
T 2cvz_A 79 YLREGTYWVDATSGEPEASRRLAERLREKGV 109 (289)
T ss_dssp TCCTTEEEEECSCCCHHHHHHHHHHHHTTTE
T ss_pred hCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 7899999999999998888999999887543
No 82
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.19 E-value=3.3e-11 Score=110.83 Aligned_cols=112 Identities=14% Similarity=0.200 Sum_probs=92.0
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccH--HH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK--DR 195 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~--~~ 195 (304)
++|+|||+|.||..+++.|...|++|.+||+++...+...+.|.....+++++++++|+|++++|....++.++.. ..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~ 110 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGV 110 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhH
Confidence 6899999999999999999999999999999876666566667777778989999999999999976666555432 23
Q ss_pred HhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 196 IAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 196 l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
++.++++.++|+++++.....+.+.+.+......
T Consensus 111 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~ 144 (316)
T 2uyy_A 111 LQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGR 144 (316)
T ss_dssp GGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 4678999999999998888888888888664443
No 83
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.17 E-value=9.6e-11 Score=107.30 Aligned_cols=135 Identities=14% Similarity=0.130 Sum_probs=90.0
Q ss_pred hHHHHhCCcccccccccccccCCCEEEEEe-eChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCc
Q 021995 95 HHQVISGEWNVAGVAYRAYDLEGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPK 173 (304)
Q Consensus 95 ~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG-~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~ 173 (304)
+..+++..|.... ...++|+||| +|.||..+|+.|+..|++|.++|+++. .++++.+++
T Consensus 6 ~~~~~~~~~~~~~-------~~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~-------------~~~~~~~~~ 65 (298)
T 2pv7_A 6 YANENQFGFKTIN-------SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW-------------AVAESILAN 65 (298)
T ss_dssp -------CCCCSC-------TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG-------------GGHHHHHTT
T ss_pred HhhhhccCccccC-------CCCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc-------------cCHHHHhcC
Confidence 3455566785321 1356899999 999999999999999999999998642 156778899
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCC-CCCCccCCCC
Q 021995 174 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAP-KDHPWRYMPN 252 (304)
Q Consensus 174 aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~-~~~~l~~~~n 252 (304)
||+|++|+|... +..++ ++..+.++++++++|+++.+....+++.+.+. .. +....|.. +..+++....
T Consensus 66 aDvVilavp~~~-~~~vl-~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~~---~~-----~v~~hP~~g~~~~~~~g~~ 135 (298)
T 2pv7_A 66 ADVVIVSVPINL-TLETI-ERLKPYLTENMLLADLTSVKREPLAKMLEVHT---GA-----VLGLHPMFGADIASMAKQV 135 (298)
T ss_dssp CSEEEECSCGGG-HHHHH-HHHGGGCCTTSEEEECCSCCHHHHHHHHHHCS---SE-----EEEEEECSCTTCSCCTTCE
T ss_pred CCEEEEeCCHHH-HHHHH-HHHHhhcCCCcEEEECCCCCcHHHHHHHHhcC---CC-----EEeeCCCCCCCchhhcCCe
Confidence 999999999654 55555 45667789999999998876654555554431 22 22222321 2234555567
Q ss_pred eEEccCC
Q 021995 253 QAMTPHV 259 (304)
Q Consensus 253 v~lTPHi 259 (304)
+++|||-
T Consensus 136 ~~l~~~~ 142 (298)
T 2pv7_A 136 VVRCDGR 142 (298)
T ss_dssp EEEEEEE
T ss_pred EEEecCC
Confidence 8999975
No 84
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.16 E-value=1.6e-11 Score=109.40 Aligned_cols=98 Identities=13% Similarity=0.178 Sum_probs=69.3
Q ss_pred cccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCC--------------hhH-HHhcCceecCCHHhhcCcCC
Q 021995 111 RAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMD--------------PQL-EKETGAKFEEDLDTMLPKCD 175 (304)
Q Consensus 111 ~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~--------------~~~-~~~~g~~~~~~l~ell~~aD 175 (304)
...++.+++|||||+|.||..+|+.|...|++|++|||++.. .+. ....+.....++++++++||
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD 92 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAE 92 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCS
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCC
Confidence 345899999999999999999999999999999999997543 111 12234444568889999999
Q ss_pred EEEEcCCCChhhhccccHHH-HhcCCCCCEEEEcCCC
Q 021995 176 IVVVNTPLTEKTRGMFDKDR-IAKMKKGVLIVNNARG 211 (304)
Q Consensus 176 vVi~~~p~~~~t~~~i~~~~-l~~mk~g~ilVn~~rg 211 (304)
+|++++|...... .+ .+. ...+ ++.++||++-|
T Consensus 93 vVilavp~~~~~~-~~-~~i~~~~l-~g~ivi~~s~~ 126 (245)
T 3dtt_A 93 LVVNATEGASSIA-AL-TAAGAENL-AGKILVDIANP 126 (245)
T ss_dssp EEEECSCGGGHHH-HH-HHHCHHHH-TTSEEEECCCC
T ss_pred EEEEccCcHHHHH-HH-HHhhhhhc-CCCEEEECCCC
Confidence 9999999764432 22 222 2334 89999999943
No 85
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.15 E-value=6e-11 Score=115.62 Aligned_cols=112 Identities=13% Similarity=0.157 Sum_probs=92.5
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhc----CceecCCHHhhcCc---CCEEEEcCCCChhhhcc
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET----GAKFEEDLDTMLPK---CDIVVVNTPLTEKTRGM 190 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~----g~~~~~~l~ell~~---aDvVi~~~p~~~~t~~~ 190 (304)
++|||||+|.||+.+|+.|...|++|.+|||++...+...+. ++....+++++++. +|+|++++|....+..+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 579999999999999999999999999999976544444333 66667789888765 99999999987777777
Q ss_pred ccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceE
Q 021995 191 FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAG 230 (304)
Q Consensus 191 i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~g 230 (304)
+ ++..+.+++|.++|+++.+...+...+.+.+.+..+..
T Consensus 86 l-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~ 124 (474)
T 2iz1_A 86 I-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINF 124 (474)
T ss_dssp H-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEE
T ss_pred H-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeE
Confidence 6 46777899999999999999888888988887755553
No 86
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.14 E-value=1e-10 Score=114.25 Aligned_cols=112 Identities=12% Similarity=0.116 Sum_probs=93.2
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHh-----cCceecCCHHhhc---CcCCEEEEcCCCChhhhc
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-----TGAKFEEDLDTML---PKCDIVVVNTPLTEKTRG 189 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~-----~g~~~~~~l~ell---~~aDvVi~~~p~~~~t~~ 189 (304)
++|||||+|.||+.+|..|...|++|.+|||++.+.+...+ .++....++++++ +++|+|++++|....++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 47999999999999999999999999999998755554444 5666677898886 589999999998777777
Q ss_pred cccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceE
Q 021995 190 MFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAG 230 (304)
Q Consensus 190 ~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~g 230 (304)
++ .+..+.+++|.++|+++.|...+...+.+.+.+..+..
T Consensus 83 vl-~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~ 122 (482)
T 2pgd_A 83 FI-EKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILF 122 (482)
T ss_dssp HH-HHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEE
T ss_pred HH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeE
Confidence 76 46777899999999999999888888888887755543
No 87
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.11 E-value=1.4e-10 Score=113.22 Aligned_cols=112 Identities=14% Similarity=0.146 Sum_probs=91.4
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHh-cC-------ceecCCHHhhcC---cCCEEEEcCCCChh
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-TG-------AKFEEDLDTMLP---KCDIVVVNTPLTEK 186 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~-~g-------~~~~~~l~ell~---~aDvVi~~~p~~~~ 186 (304)
++|||||+|.||+.+|+.|...|++|.+|||++...+...+ .| +....+++++++ .+|+|++++|....
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 37999999999999999999999999999997644443333 25 556678888876 49999999998777
Q ss_pred hhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceE
Q 021995 187 TRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAG 230 (304)
Q Consensus 187 t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~g 230 (304)
++.++ ++..+.+++|.++|+++.|...+...+.+.+.+..+..
T Consensus 82 v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~ 124 (478)
T 1pgj_A 82 TDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRF 124 (478)
T ss_dssp HHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEE
T ss_pred HHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeE
Confidence 77776 46777899999999999999888888999898765553
No 88
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.08 E-value=1e-10 Score=104.64 Aligned_cols=103 Identities=13% Similarity=0.165 Sum_probs=80.9
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCC--CCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHHH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRV--KMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 195 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~--~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~ 195 (304)
++|||||+|.||..+++.|...|++|++||+. +...+...+.|+. .+++++++++|+|++++|.......+ .+.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~--~~~ 76 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT--ETSEEDVYSCPVVISAVTPGVALGAA--RRA 76 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE--ECCHHHHHTSSEEEECSCGGGHHHHH--HHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc--CCHHHHHhcCCEEEEECCCHHHHHHH--HHH
Confidence 47999999999999999999899999999873 2222333345665 57888889999999999976555544 466
Q ss_pred HhcCCCCCEEEEcCCCchhchHHHHHHHHcC
Q 021995 196 IAKMKKGVLIVNNARGAIMDTQAVVDACSSG 226 (304)
Q Consensus 196 l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g 226 (304)
.+.+++ ++||++.+...+.+.+.+.+.+.
T Consensus 77 ~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~ 105 (264)
T 1i36_A 77 GRHVRG--IYVDINNISPETVRMASSLIEKG 105 (264)
T ss_dssp HTTCCS--EEEECSCCCHHHHHHHHHHCSSS
T ss_pred HHhcCc--EEEEccCCCHHHHHHHHHHHhhC
Confidence 677776 99999988887888888888664
No 89
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.06 E-value=7.9e-10 Score=102.43 Aligned_cols=141 Identities=13% Similarity=0.062 Sum_probs=95.6
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHh-----------cC--------------ceecCCHHhhc
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-----------TG--------------AKFEEDLDTML 171 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g--------------~~~~~~l~ell 171 (304)
-++|+|||.|.||..+|..+...|++|++||+++...+...+ .| +....++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav 85 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHH
Confidence 468999999999999999999999999999998644333221 22 34567899999
Q ss_pred CcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCC
Q 021995 172 PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMP 251 (304)
Q Consensus 172 ~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~ 251 (304)
++||+|+.++|...+.+..+-++..+.++++++|++.+.+- ....+.+.+.. .....++.-|. |.+ ..+
T Consensus 86 ~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i--~~~~la~~~~~-~~r~ig~Hp~~--P~~------~~~ 154 (319)
T 2dpo_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCL--LPSKLFTGLAH-VKQCIVAHPVN--PPY------YIP 154 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSC--CHHHHHTTCTT-GGGEEEEEECS--STT------TCC
T ss_pred hcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCCh--HHHHHHHhcCC-CCCeEEeecCC--chh------hcc
Confidence 99999999999876665555567778899999998776653 34566655543 22333444332 321 234
Q ss_pred CeEEccCCCcCCHHHHHH
Q 021995 252 NQAMTPHVSGTTIDAQLR 269 (304)
Q Consensus 252 nv~lTPHia~~t~e~~~~ 269 (304)
-+.++|+-.+ +.+..++
T Consensus 155 lveiv~g~~t-~~e~~~~ 171 (319)
T 2dpo_A 155 LVELVPHPET-SPATVDR 171 (319)
T ss_dssp EEEEEECTTC-CHHHHHH
T ss_pred eEEEeCCCCC-CHHHHHH
Confidence 4667775433 3344443
No 90
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.06 E-value=1e-10 Score=113.04 Aligned_cols=98 Identities=16% Similarity=0.224 Sum_probs=78.1
Q ss_pred ccccCC-CEEEEEeeChhhHHHHHHhccC------CCeEEEEcCC-CCChhHHHhcCcee----cCCHHhhcCcCCEEEE
Q 021995 112 AYDLEG-KTVGTVGCGRIGKLLLQRLKPF------NCNLLYHDRV-KMDPQLEKETGAKF----EEDLDTMLPKCDIVVV 179 (304)
Q Consensus 112 ~~~L~g-~~vgIIG~G~IG~~lA~~l~~~------G~~V~~~dr~-~~~~~~~~~~g~~~----~~~l~ell~~aDvVi~ 179 (304)
...|.| ++|||||+|+||.++|+.|+.. |++|++.++. ....+.+.+.|+.. ..++.+++++||+|++
T Consensus 48 ~~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVIL 127 (525)
T 3fr7_A 48 PEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLL 127 (525)
T ss_dssp HHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEE
T ss_pred hHHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEE
Confidence 457899 9999999999999999999987 9998766554 44556667778764 2578999999999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCCEEEEcCCCc
Q 021995 180 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGA 212 (304)
Q Consensus 180 ~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~ 212 (304)
++|..... .++. +.++.||+|++| -.+.|-
T Consensus 128 aVP~~~~~-eVl~-eI~p~LK~GaIL-s~AaGf 157 (525)
T 3fr7_A 128 LISDAAQA-DNYE-KIFSHMKPNSIL-GLSHGF 157 (525)
T ss_dssp CSCHHHHH-HHHH-HHHHHSCTTCEE-EESSSH
T ss_pred CCChHHHH-HHHH-HHHHhcCCCCeE-EEeCCC
Confidence 99976554 4554 788999999995 566664
No 91
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.63 E-value=1.7e-11 Score=106.23 Aligned_cols=94 Identities=16% Similarity=0.198 Sum_probs=75.3
Q ss_pred cCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHH
Q 021995 115 LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKD 194 (304)
Q Consensus 115 L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~ 194 (304)
+.+++|+|||+|.||+.+++.|...|++|++|+|++. .+.....++... +++++++++|+|++++|.. .+..++ +
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g~~~~-~~~~~~~~aDvVilav~~~-~~~~v~--~ 91 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRGAEVL-CYSEAASRSDVIVLAVHRE-HYDFLA--E 91 (201)
Confidence 6788999999999999999999999999999999765 333333455544 7888899999999999964 455655 2
Q ss_pred HHhcCCCCCEEEEcCCCchh
Q 021995 195 RIAKMKKGVLIVNNARGAIM 214 (304)
Q Consensus 195 ~l~~mk~g~ilVn~~rg~~v 214 (304)
+..++++.++||+++|-..
T Consensus 92 -l~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 92 -LADSLKGRVLIDVSNNQKM 110 (201)
Confidence 4456789999999999864
No 92
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.05 E-value=1.9e-10 Score=103.09 Aligned_cols=101 Identities=15% Similarity=0.234 Sum_probs=79.8
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCCe-EEEEcCCCCChhHHHh-cCceecCCHHhhcCcCCEEEEcCCCChhhhccc
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNCN-LLYHDRVKMDPQLEKE-TGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF 191 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~~-V~~~dr~~~~~~~~~~-~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i 191 (304)
++.+++|||||+|.||+.+++.|...|++ |.+|||++...+...+ .|+....+++++++++|+|++++|... ...++
T Consensus 7 ~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~-~~~v~ 85 (266)
T 3d1l_A 7 SIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSA-FAELL 85 (266)
T ss_dssp CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHH-HHHHH
T ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHH-HHHHH
Confidence 45667999999999999999999988998 8999997644443333 477777789999999999999999653 34444
Q ss_pred cHHHHhcCCCCCEEEEcCCCchhch
Q 021995 192 DKDRIAKMKKGVLIVNNARGAIMDT 216 (304)
Q Consensus 192 ~~~~l~~mk~g~ilVn~~rg~~vd~ 216 (304)
++..+.++++.++|+++.|...+.
T Consensus 86 -~~l~~~~~~~~ivv~~s~~~~~~~ 109 (266)
T 3d1l_A 86 -QGIVEGKREEALMVHTAGSIPMNV 109 (266)
T ss_dssp -HHHHTTCCTTCEEEECCTTSCGGG
T ss_pred -HHHHhhcCCCcEEEECCCCCchHH
Confidence 455667889999999999877543
No 93
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.04 E-value=7.9e-10 Score=101.22 Aligned_cols=137 Identities=13% Similarity=0.165 Sum_probs=93.2
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhc-------CceecCCHHhhcCcCCEEEEcCCCChhhh
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET-------GAKFEEDLDTMLPKCDIVVVNTPLTEKTR 188 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~-------g~~~~~~l~ell~~aDvVi~~~p~~~~t~ 188 (304)
+.|+|||||+|.||..+|+.+. .|++|++||+++...+.+.+. ++....++++ +++||+|+.++|...+.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~vk 88 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNTK 88 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHHH
Confidence 5689999999999999999999 999999999987555555444 5655667876 889999999999988776
Q ss_pred ccccHHHHhcCCCCCEEE-EcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEEccCCCcCCHHHH
Q 021995 189 GMFDKDRIAKMKKGVLIV-NNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQ 267 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilV-n~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~lTPHia~~t~e~~ 267 (304)
..+-.+ +..+ ++++++ |+|.-++ ..+.+.+. ......++--|. |. ...+-+.++|+-.+ +.+..
T Consensus 89 ~~l~~~-l~~~-~~~IlasntSti~~---~~~a~~~~-~~~r~~G~Hf~~--Pv------~~~~lveiv~g~~t-~~~~~ 153 (293)
T 1zej_A 89 VEVLRE-VERL-TNAPLCSNTSVISV---DDIAERLD-SPSRFLGVHWMN--PP------HVMPLVEIVISRFT-DSKTV 153 (293)
T ss_dssp HHHHHH-HHTT-CCSCEEECCSSSCH---HHHHTTSS-CGGGEEEEEECS--ST------TTCCEEEEEECTTC-CHHHH
T ss_pred HHHHHH-HhcC-CCCEEEEECCCcCH---HHHHHHhh-cccceEeEEecC--cc------ccCCEEEEECCCCC-CHHHH
Confidence 665444 5666 898885 7776544 34444332 223344555443 32 23455667775433 34444
Q ss_pred HH
Q 021995 268 LR 269 (304)
Q Consensus 268 ~~ 269 (304)
++
T Consensus 154 ~~ 155 (293)
T 1zej_A 154 AF 155 (293)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 94
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.02 E-value=3e-10 Score=110.40 Aligned_cols=136 Identities=12% Similarity=0.175 Sum_probs=94.5
Q ss_pred CEEEEEeeChhhHHHHHHhccC--CCeEEEEcCCCCChhHHH---------------h----cCceecCCHHhhcCcCCE
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF--NCNLLYHDRVKMDPQLEK---------------E----TGAKFEEDLDTMLPKCDI 176 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~--G~~V~~~dr~~~~~~~~~---------------~----~g~~~~~~l~ell~~aDv 176 (304)
++|+|||+|.||..+|..|... |++|++||+++.+.+... . .+.....++++.+++||+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 5899999999999999999877 899999999753322211 1 244555688888999999
Q ss_pred EEEcCCCChhhhcc-------------ccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEee---cCCCCC
Q 021995 177 VVVNTPLTEKTRGM-------------FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGD---VWNPQP 240 (304)
Q Consensus 177 Vi~~~p~~~~t~~~-------------i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lD---V~~~ep 240 (304)
|++|+|......+. ..++..+.|+++.++|+.++.++-..+.+.+.+.+.... .+| ++.+|+
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~--~~d~~V~~~Pe~ 163 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKP--NLNLQVLSNPEF 163 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCT--TCEEEEEECCCC
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCC--CCCeEEEeCHHH
Confidence 99999854433221 123456678999999999998887788888888875422 123 345555
Q ss_pred CCCCCC---ccCCCCeEE
Q 021995 241 APKDHP---WRYMPNQAM 255 (304)
Q Consensus 241 ~~~~~~---l~~~~nv~l 255 (304)
..+... +...+++++
T Consensus 164 ~~~G~~~~d~~~~~rivv 181 (467)
T 2q3e_A 164 LAEGTAIKDLKNPDRVLI 181 (467)
T ss_dssp CCTTSHHHHHHSCSCEEE
T ss_pred hhcccchhhccCCCEEEE
Confidence 443332 344555654
No 95
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.00 E-value=8.8e-10 Score=98.98 Aligned_cols=107 Identities=14% Similarity=0.170 Sum_probs=80.9
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCCh-hHHHhcCceecCCHHhhcCcCCEEEEcCCCCh--hhhcc
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDP-QLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE--KTRGM 190 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~-~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~--~t~~~ 190 (304)
++.| +++|||+|.||+.+++.|...|++|.++||+..+. +.++..+.. ..+++++ +++|+|++|+|... .+...
T Consensus 114 ~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-~~~~~~~-~~~Divi~~tp~~~~~~~~~~ 190 (263)
T 2d5c_A 114 PLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR-AVPLEKA-REARLLVNATRVGLEDPSASP 190 (263)
T ss_dssp CCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-ECCGGGG-GGCSEEEECSSTTTTCTTCCS
T ss_pred CCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-hhhHhhc-cCCCEEEEccCCCCCCCCCCC
Confidence 5889 99999999999999999999999999999975332 233344555 4578888 99999999999763 22234
Q ss_pred ccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCc
Q 021995 191 FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHI 228 (304)
Q Consensus 191 i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i 228 (304)
+. .+.+++|.+++|++.++. +. .|.+++++..+
T Consensus 191 l~---~~~l~~g~~viD~~~~p~-~t-~l~~~a~~~g~ 223 (263)
T 2d5c_A 191 LP---AELFPEEGAAVDLVYRPL-WT-RFLREAKAKGL 223 (263)
T ss_dssp SC---GGGSCSSSEEEESCCSSS-SC-HHHHHHHHTTC
T ss_pred CC---HHHcCCCCEEEEeecCCc-cc-HHHHHHHHCcC
Confidence 43 466899999999998743 44 47777666444
No 96
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.98 E-value=9.2e-10 Score=89.69 Aligned_cols=89 Identities=12% Similarity=0.228 Sum_probs=70.8
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChh-HHHhcCce--ecCCHHhhcCcCCEEEEcCCCChhhhccccH
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQ-LEKETGAK--FEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 193 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~-~~~~~g~~--~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~ 193 (304)
+++|+|||.|.||+.+++.|..+|++|.+++|++...+ .+++++.. ..++++++++++|+|+.++|... .++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~~---~~~~~ 97 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSKT---PIVEE 97 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCSS---CSBCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCCC---cEeeH
Confidence 88999999999999999999999999999999764433 34455543 45788999999999999999652 34443
Q ss_pred HHHhcCCCCCEEEEcCCC
Q 021995 194 DRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 194 ~~l~~mk~g~ilVn~~rg 211 (304)
..+++|.+++|++..
T Consensus 98 ---~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 98 ---RSLMPGKLFIDLGNP 112 (144)
T ss_dssp ---GGCCTTCEEEECCSS
T ss_pred ---HHcCCCCEEEEccCC
Confidence 457889999999754
No 97
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=98.98 E-value=4.4e-09 Score=101.80 Aligned_cols=180 Identities=16% Similarity=0.164 Sum_probs=111.2
Q ss_pred cCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCccccccc---ccccccCCCEEEEEeeChhhHHHHHHhccCCCeEE
Q 021995 68 VTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVA---YRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL 144 (304)
Q Consensus 68 ~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~---~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~ 144 (304)
..|.|--.|.|.+.++++..-| ..+.|...... .....-.=++|+|||.|.||..+|..+...|++|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~a~~---------~~~~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~ 81 (460)
T 3k6j_A 11 STGENLYFQGSEVRSYLMEAHS---------LAGQWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETF 81 (460)
T ss_dssp TTSGGGGGCBCHHHHHHHHTTC---------CTTSCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred ccccchhhhhHHHHHHHHhHHH---------hhccccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEE
Confidence 3455556667777777777332 23456543110 01111223799999999999999999999999999
Q ss_pred EEcCCCCChh--------HHHhcC-------------ceecCCHHhhcCcCCEEEEcCCCChhhhccccHHHHhcCCCCC
Q 021995 145 YHDRVKMDPQ--------LEKETG-------------AKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGV 203 (304)
Q Consensus 145 ~~dr~~~~~~--------~~~~~g-------------~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ 203 (304)
+||+++.... ...+.| +....+++ .+++||+|+.++|.+.+.+..+-+++.+.+++++
T Consensus 82 l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~a 160 (460)
T 3k6j_A 82 LVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFANLENICKSTC 160 (460)
T ss_dssp EECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTC
T ss_pred EEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCC
Confidence 9999764110 111222 23456775 6899999999999877766555567778899999
Q ss_pred EEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEEccCCCcCCHHHHHH
Q 021995 204 LIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLR 269 (304)
Q Consensus 204 ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~lTPHia~~t~e~~~~ 269 (304)
+|+..+.+ +....+.+.+.. .-..+++.-|. |.+ ..+-+.++|+-. .+.+..++
T Consensus 161 IlasnTSs--l~i~~ia~~~~~-p~r~iG~Hffn--Pv~------~m~LvEIv~g~~-Ts~e~~~~ 214 (460)
T 3k6j_A 161 IFGTNTSS--LDLNEISSVLRD-PSNLVGIHFFN--PAN------VIRLVEIIYGSH-TSSQAIAT 214 (460)
T ss_dssp EEEECCSS--SCHHHHHTTSSS-GGGEEEEECCS--STT------TCCEEEEECCSS-CCHHHHHH
T ss_pred EEEecCCC--hhHHHHHHhccC-CcceEEEEecc--hhh------hCCEEEEEeCCC-CCHHHHHH
Confidence 99754444 333455555432 33445666554 332 234466776533 23444443
No 98
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.97 E-value=8.1e-10 Score=104.03 Aligned_cols=108 Identities=22% Similarity=0.277 Sum_probs=84.4
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChh-HHHhcCceecCCHHhhcC-cCCEEEEcCCCChhhhccc
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQ-LEKETGAKFEEDLDTMLP-KCDIVVVNTPLTEKTRGMF 191 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~-~~~~~g~~~~~~l~ell~-~aDvVi~~~p~~~~t~~~i 191 (304)
+|.|++|+|+|+|+||+.+|++|..+|++|+++|++....+ .+++++.+.. +.++++. +||+++.|. +.+++
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v-~~~~ll~~~~DIvip~a-----~~~~I 243 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-APNAIYGVTCDIFAPCA-----LGAVL 243 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CGGGTTTCCCSEEEECS-----CSCCB
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE-ChHHHhccCCcEeeccc-----hHHHh
Confidence 69999999999999999999999999999999998653322 3344576655 6667766 899999875 45688
Q ss_pred cHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 192 DKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 192 ~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
+.+.++.|+ ..++++.+++++.+++ ..+.|.++.+.
T Consensus 244 ~~~~~~~lg-~~iV~e~An~p~t~~e-a~~~L~~~Gi~ 279 (364)
T 1leh_A 244 NDFTIPQLK-AKVIAGSADNQLKDPR-HGKYLHELGIV 279 (364)
T ss_dssp STTHHHHCC-CSEECCSCSCCBSSHH-HHHHHHHHTCE
T ss_pred CHHHHHhCC-CcEEEeCCCCCcccHH-HHHHHHhCCCE
Confidence 888888884 5788999999887755 55667766654
No 99
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.94 E-value=1.3e-09 Score=98.60 Aligned_cols=106 Identities=14% Similarity=0.255 Sum_probs=78.8
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChh-HHHhcCceecCCHHhhcCcCCEEEEcCCCChh--hhcc
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQ-LEKETGAKFEEDLDTMLPKCDIVVVNTPLTEK--TRGM 190 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~-~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~--t~~~ 190 (304)
++.|++++|||.|.+|+.+++.|...|++|+++||+..+.+ .....++....+++++++++|+|++++|.... +...
T Consensus 126 ~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~~ 205 (275)
T 2hk9_A 126 EVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEI 205 (275)
T ss_dssp TGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSSTTCCCS
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCCCCCCCC
Confidence 57889999999999999999999999999999999753322 22234555555788899999999999997642 2233
Q ss_pred ccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcC
Q 021995 191 FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 226 (304)
Q Consensus 191 i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g 226 (304)
++ ++.++++.+++|++. ....+.+..++.
T Consensus 206 i~---~~~l~~g~~viDv~~----~~t~ll~~a~~~ 234 (275)
T 2hk9_A 206 FN---YDLIKKDHVVVDIIY----KETKLLKKAKEK 234 (275)
T ss_dssp SC---GGGCCTTSEEEESSS----SCCHHHHHHHHT
T ss_pred CC---HHHcCCCCEEEEcCC----ChHHHHHHHHHC
Confidence 43 456899999999987 233455544443
No 100
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.93 E-value=6.2e-10 Score=100.98 Aligned_cols=94 Identities=18% Similarity=0.283 Sum_probs=75.0
Q ss_pred CEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHHHH
Q 021995 118 KTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRI 196 (304)
Q Consensus 118 ~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~l 196 (304)
++|+|||+ |.||..+++.|...|++|++|||++...+...+.|+... ++.+.++++|+|++++|... +..++ ++..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~aDvVi~av~~~~-~~~v~-~~l~ 88 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLT-DGDGWIDEADVVVLALPDNI-IEKVA-EDIV 88 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCC-CSSGGGGTCSEEEECSCHHH-HHHHH-HHHG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcC-CHHHHhcCCCEEEEcCCchH-HHHHH-HHHH
Confidence 58999999 999999999999999999999997654444455565543 67788899999999999543 44444 4566
Q ss_pred hcCCCCCEEEEcCCCchh
Q 021995 197 AKMKKGVLIVNNARGAIM 214 (304)
Q Consensus 197 ~~mk~g~ilVn~~rg~~v 214 (304)
+.+++++++|+++.|..+
T Consensus 89 ~~l~~~~ivv~~s~~~~~ 106 (286)
T 3c24_A 89 PRVRPGTIVLILDAAAPY 106 (286)
T ss_dssp GGSCTTCEEEESCSHHHH
T ss_pred HhCCCCCEEEECCCCchh
Confidence 678999999999888743
No 101
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=98.92 E-value=1.7e-09 Score=100.08 Aligned_cols=107 Identities=12% Similarity=0.200 Sum_probs=82.3
Q ss_pred cCCCEEEEEeeChhhHHHHHHhccCC----CeEEEEcCCCC--ChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhh
Q 021995 115 LEGKTVGTVGCGRIGKLLLQRLKPFN----CNLLYHDRVKM--DPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTR 188 (304)
Q Consensus 115 L~g~~vgIIG~G~IG~~lA~~l~~~G----~~V~~~dr~~~--~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~ 188 (304)
+..++|||||+|.||..+++.|...| ++|++|||++. ..+...+.|+....+..+.++++|+|++++| .....
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~ 98 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIP 98 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHH
Confidence 44568999999999999999999888 78999999764 4445556688777788899999999999999 34555
Q ss_pred ccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHc
Q 021995 189 GMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 225 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~ 225 (304)
.++ .+....++++.++|+++.|-. .+.+.+.+.+
T Consensus 99 ~vl-~~l~~~l~~~~ivvs~s~gi~--~~~l~~~l~~ 132 (322)
T 2izz_A 99 FIL-DEIGADIEDRHIVVSCAAGVT--ISSIEKKLSA 132 (322)
T ss_dssp HHH-HHHGGGCCTTCEEEECCTTCC--HHHHHHHHHT
T ss_pred HHH-HHHHhhcCCCCEEEEeCCCCC--HHHHHHHHhh
Confidence 544 355567889999999987643 3456666654
No 102
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.92 E-value=8.4e-10 Score=96.30 Aligned_cols=95 Identities=15% Similarity=0.194 Sum_probs=72.2
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHHH
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 195 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~ 195 (304)
.+++|+|||+|.||+.+++.|...|++|.+++|+....+...+.|+... +++++++++|+|++++|. .....++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~~DvVi~av~~-~~~~~v~~--- 101 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT-FQEEAVSSPEVIFVAVFR-EHYSSLCS--- 101 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE-EHHHHTTSCSEEEECSCG-GGSGGGGG---
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee-cHHHHHhCCCEEEECCCh-HHHHHHHH---
Confidence 4578999999999999999999999999999997543333333466554 788899999999999994 34445542
Q ss_pred HhcCCCCCEEEEcCCCchhc
Q 021995 196 IAKMKKGVLIVNNARGAIMD 215 (304)
Q Consensus 196 l~~mk~g~ilVn~~rg~~vd 215 (304)
+..+.++.++|++++|...+
T Consensus 102 l~~~~~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 102 LSDQLAGKILVDVSNPTEQE 121 (215)
T ss_dssp GHHHHTTCEEEECCCCCHHH
T ss_pred HHHhcCCCEEEEeCCCcccc
Confidence 33333799999999998654
No 103
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.92 E-value=2.7e-09 Score=95.07 Aligned_cols=101 Identities=12% Similarity=0.227 Sum_probs=77.8
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHH-hcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHHHH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-ETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRI 196 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~l 196 (304)
++|||||+|.||+.+++.|...|++|.+|||++...+... .+|+....+++++++++|+|++++| .... .+.+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~-----~~v~ 77 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLF-----ETVL 77 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGH-----HHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhH-----HHHH
Confidence 5899999999999999999999999999999764443333 3477767789999999999999999 3332 4556
Q ss_pred hcCCCCCEEEEcCCCchhchHHHHHHHHcC
Q 021995 197 AKMKKGVLIVNNARGAIMDTQAVVDACSSG 226 (304)
Q Consensus 197 ~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g 226 (304)
..++++.++|++..|-.. +.+.+.+..+
T Consensus 78 ~~l~~~~~vv~~~~~~~~--~~l~~~~~~~ 105 (259)
T 2ahr_A 78 KPLHFKQPIISMAAGISL--QRLATFVGQD 105 (259)
T ss_dssp TTSCCCSCEEECCTTCCH--HHHHHHHCTT
T ss_pred HHhccCCEEEEeCCCCCH--HHHHHhcCCC
Confidence 667789999999766543 4566666543
No 104
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.90 E-value=1.1e-09 Score=97.20 Aligned_cols=104 Identities=17% Similarity=0.303 Sum_probs=78.6
Q ss_pred CEEEEEeeChhhHHHHHHhccCCC----eEEEEcCCCCChhHHH-hcCceecCCHHhhcCcCCEEEEcCCCChhhhcccc
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNC----NLLYHDRVKMDPQLEK-ETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~----~V~~~dr~~~~~~~~~-~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~ 192 (304)
++|||||+|.||+.+++.|...|+ +|.+|||++.+.+... +.|+....+++++++++|+|++++|.. ....++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~~-~~~~v~- 80 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKPD-LYASII- 80 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCTT-THHHHC-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCHH-HHHHHH-
Confidence 589999999999999999999998 9999999865544443 468887789999999999999999743 334444
Q ss_pred HHHHhcCCCCCEEEEcCCCchhchHHHHHHHHc
Q 021995 193 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 225 (304)
Q Consensus 193 ~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~ 225 (304)
++..+.++++.++|.+..|-- .+.+.+.+..
T Consensus 81 ~~l~~~l~~~~~vvs~~~gi~--~~~l~~~~~~ 111 (247)
T 3gt0_A 81 NEIKEIIKNDAIIVTIAAGKS--IESTENAFNK 111 (247)
T ss_dssp ---CCSSCTTCEEEECSCCSC--HHHHHHHHCS
T ss_pred HHHHhhcCCCCEEEEecCCCC--HHHHHHHhCC
Confidence 455566889999997766543 4456666644
No 105
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.88 E-value=3.1e-09 Score=96.48 Aligned_cols=105 Identities=14% Similarity=0.164 Sum_probs=81.5
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCC---eEEEEcCCCCChhHHHh-cCceecCCHHhhcCcCCEEEEcCCCChhhhcccc
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNC---NLLYHDRVKMDPQLEKE-TGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~---~V~~~dr~~~~~~~~~~-~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~ 192 (304)
.++|||||+|+||..+++.|...|+ +|++|||++...+...+ +|+....+..++++++|+|++++|. .....++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl- 80 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVC- 80 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHH-
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHH-
Confidence 4689999999999999999998898 89999998765554444 4887777899999999999999984 3333443
Q ss_pred HHHHhc-CCCCCEEEEcCCCchhchHHHHHHHHc
Q 021995 193 KDRIAK-MKKGVLIVNNARGAIMDTQAVVDACSS 225 (304)
Q Consensus 193 ~~~l~~-mk~g~ilVn~~rg~~vd~~aL~~aL~~ 225 (304)
++..+. ++++.++|++.-|-. .+.|.+.+..
T Consensus 81 ~~l~~~~l~~~~iiiS~~agi~--~~~l~~~l~~ 112 (280)
T 3tri_A 81 EELKDILSETKILVISLAVGVT--TPLIEKWLGK 112 (280)
T ss_dssp HHHHHHHHTTTCEEEECCTTCC--HHHHHHHHTC
T ss_pred HHHHhhccCCCeEEEEecCCCC--HHHHHHHcCC
Confidence 344455 788889998877654 4667777765
No 106
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=98.87 E-value=1.5e-08 Score=92.59 Aligned_cols=104 Identities=15% Similarity=0.120 Sum_probs=74.6
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHH-----------hc------------------CceecCCHH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-----------ET------------------GAKFEEDLD 168 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~-----------~~------------------g~~~~~~l~ 168 (304)
++|+|||.|.||..+|..|...|++|++||+++...+... +. .+....+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 6899999999999999999988999999999754332211 11 233456888
Q ss_pred hhcCcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHH
Q 021995 169 TMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDAC 223 (304)
Q Consensus 169 ell~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL 223 (304)
+.+++||+|++++|...+....+-++..+.++++++++..+.+-. ...+.+.+
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~--~~~l~~~~ 148 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQ--ITSIANAT 148 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSC--HHHHHTTS
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCC--HHHHHHhc
Confidence 889999999999997655444343555567889999986555533 34555444
No 107
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=98.87 E-value=3.4e-09 Score=92.06 Aligned_cols=80 Identities=14% Similarity=0.243 Sum_probs=62.5
Q ss_pred cccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhcccc
Q 021995 113 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 113 ~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~ 192 (304)
.++.+++|+|||+|.||..+|+.|...|++|++|||++. .+++||+|++++| .+.+..++.
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~------------------~~~~aD~vi~av~-~~~~~~v~~ 75 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ------------------ATTLGEIVIMAVP-YPALAALAK 75 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC------------------CSSCCSEEEECSC-HHHHHHHHH
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH------------------HhccCCEEEEcCC-cHHHHHHHH
Confidence 468899999999999999999999999999999998642 4678999999999 555555543
Q ss_pred HHHHhcCCCCCEEEEcCCCch
Q 021995 193 KDRIAKMKKGVLIVNNARGAI 213 (304)
Q Consensus 193 ~~~l~~mk~g~ilVn~~rg~~ 213 (304)
+..+.++ ++++|++++|-.
T Consensus 76 -~l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 76 -QYATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp -HTHHHHT-TSEEEECCCCBC
T ss_pred -HHHHhcC-CCEEEEECCCCC
Confidence 4445677 999999999765
No 108
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.87 E-value=5.3e-09 Score=100.52 Aligned_cols=116 Identities=12% Similarity=0.122 Sum_probs=85.6
Q ss_pred cccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHh------------------cCceecCCHHhhcC
Q 021995 111 RAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE------------------TGAKFEEDLDTMLP 172 (304)
Q Consensus 111 ~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~------------------~g~~~~~~l~ell~ 172 (304)
.+++..-++|+|||+|.||..+|..|.. |++|++||+++...+...+ .+.....++++.++
T Consensus 30 ~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~ 108 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYR 108 (432)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHT
T ss_pred cccccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHh
Confidence 3456777899999999999999999988 9999999997643332222 13455678889999
Q ss_pred cCCEEEEcCCCChhh-------hcc--ccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCc
Q 021995 173 KCDIVVVNTPLTEKT-------RGM--FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHI 228 (304)
Q Consensus 173 ~aDvVi~~~p~~~~t-------~~~--i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i 228 (304)
+||+|++++|...+. ..+ .-+...+ +++|+++|+.|.-++-..+.+.+.+.+..+
T Consensus 109 ~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v 172 (432)
T 3pid_A 109 NADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNV 172 (432)
T ss_dssp TCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCE
T ss_pred CCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccE
Confidence 999999999965311 111 1245566 999999999999888888889888877544
No 109
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.84 E-value=4.8e-09 Score=93.53 Aligned_cols=100 Identities=12% Similarity=0.179 Sum_probs=74.6
Q ss_pred CEEEEEeeChhhHHHHHHhccCC-CeEEEEcCCCCChhHHHh-cCceecCCHHhhcCcCCEEEEcCCCChhhhccccHHH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFN-CNLLYHDRVKMDPQLEKE-TGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 195 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G-~~V~~~dr~~~~~~~~~~-~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~ 195 (304)
++|+|||+|.||..+++.|...| ++|.+|||++...+...+ +|+....++++++ ++|+|++++| ..... +.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~-----~v 73 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDME-----AA 73 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHH-----HH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHH-----HH
Confidence 47999999999999999998889 999999997644444433 4777666788888 9999999999 44443 33
Q ss_pred HhcCC-CCCEEEEcCCCchhchHHHHHHHHcC
Q 021995 196 IAKMK-KGVLIVNNARGAIMDTQAVVDACSSG 226 (304)
Q Consensus 196 l~~mk-~g~ilVn~~rg~~vd~~aL~~aL~~g 226 (304)
+..++ ++.++|+++.|--. +.+.+.+..+
T Consensus 74 ~~~l~~~~~ivv~~~~g~~~--~~l~~~~~~~ 103 (263)
T 1yqg_A 74 CKNIRTNGALVLSVAAGLSV--GTLSRYLGGT 103 (263)
T ss_dssp HTTCCCTTCEEEECCTTCCH--HHHHHHTTSC
T ss_pred HHHhccCCCEEEEecCCCCH--HHHHHHcCCC
Confidence 33443 28999999665443 6676766653
No 110
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.84 E-value=3.1e-09 Score=97.95 Aligned_cols=111 Identities=12% Similarity=0.096 Sum_probs=80.6
Q ss_pred cCCCEEEEEeeChhhHHHHHHhcc-CCC-eEEEEcCCCCChhHH-HhcC--ceecCCHHhhcCcCCEEEEcCCCChhhhc
Q 021995 115 LEGKTVGTVGCGRIGKLLLQRLKP-FNC-NLLYHDRVKMDPQLE-KETG--AKFEEDLDTMLPKCDIVVVNTPLTEKTRG 189 (304)
Q Consensus 115 L~g~~vgIIG~G~IG~~lA~~l~~-~G~-~V~~~dr~~~~~~~~-~~~g--~~~~~~l~ell~~aDvVi~~~p~~~~t~~ 189 (304)
..+++|||||+|.||+.+++.|.. +|+ +|.+|||++.+.+.+ +..+ +....+++++++++|+|++++|.. ..
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~---~~ 209 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLAT---EP 209 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCS---SC
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCC---Cc
Confidence 356799999999999999998865 487 799999976444433 3335 666778999999999999999953 44
Q ss_pred cccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEee
Q 021995 190 MFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGD 234 (304)
Q Consensus 190 ~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lD 234 (304)
++.. +.+++|.++++++....- ...+.+.+.+... ..+|
T Consensus 210 v~~~---~~l~~g~~vi~~g~~~p~-~~el~~~~~~~g~--~~vD 248 (312)
T 2i99_A 210 ILFG---EWVKPGAHINAVGASRPD-WRELDDELMKEAV--LYVD 248 (312)
T ss_dssp CBCG---GGSCTTCEEEECCCCSTT-CCSBCHHHHHHSE--EEES
T ss_pred ccCH---HHcCCCcEEEeCCCCCCC-ceeccHHHHhcCE--EEEC
Confidence 5544 578999999999876553 3444444433332 3566
No 111
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.79 E-value=7.1e-09 Score=99.80 Aligned_cols=107 Identities=12% Similarity=0.114 Sum_probs=80.2
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHh-------------------cC-ceecCCHHhhcCcCCEE
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-------------------TG-AKFEEDLDTMLPKCDIV 177 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~-------------------~g-~~~~~~l~ell~~aDvV 177 (304)
++|+|||+|.||..+|..|...|++|+++|+++...+...+ .| .....++++.+++||+|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 47999999999999999999999999999997543333222 22 44556788888999999
Q ss_pred EEcCCCChh---------hhccccHHHHhcCCC---CCEEEEcCCCchhc-hHHHHHHHHc
Q 021995 178 VVNTPLTEK---------TRGMFDKDRIAKMKK---GVLIVNNARGAIMD-TQAVVDACSS 225 (304)
Q Consensus 178 i~~~p~~~~---------t~~~i~~~~l~~mk~---g~ilVn~~rg~~vd-~~aL~~aL~~ 225 (304)
++|+|.... ....+ ++..+.+++ +.++|+.+...+-. .+.+.+.+.+
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVC-REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred EEEcCCCcccCCCcchHHHHHHH-HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 999986543 33332 445566788 99999998766655 6667777765
No 112
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.79 E-value=2.2e-08 Score=96.78 Aligned_cols=107 Identities=14% Similarity=0.196 Sum_probs=83.0
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhc--------------------CceecCCHHhhcCcCCEE
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET--------------------GAKFEEDLDTMLPKCDIV 177 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~--------------------g~~~~~~l~ell~~aDvV 177 (304)
-+++|||+|.||..+|..|...|++|++||+++.+.+...+. +.....++.+.+++||+|
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDvv 88 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADAV 88 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSEE
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCEE
Confidence 489999999999999999999999999999987665544331 134557888999999999
Q ss_pred EEcCCCChh----------hhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHc
Q 021995 178 VVNTPLTEK----------TRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 225 (304)
Q Consensus 178 i~~~p~~~~----------t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~ 225 (304)
++|+|.... .+..+ ++..+.|+++.++|+.|.-++-..+.+.+.+.+
T Consensus 89 ii~Vptp~~~~~~~~Dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e 145 (446)
T 4a7p_A 89 FIAVGTPSRRGDGHADLSYVFAAA-REIAENLTKPSVIVTKSTVPVGTGDEVERIIAE 145 (446)
T ss_dssp EECCCCCBCTTTCCBCTHHHHHHH-HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCCccccCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 999885432 22332 466778999999999997666666777776665
No 113
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.76 E-value=1.6e-08 Score=97.90 Aligned_cols=107 Identities=14% Similarity=0.204 Sum_probs=80.4
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHh--------------------cCceecCCHHhhcCcCCEE
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE--------------------TGAKFEEDLDTMLPKCDIV 177 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~--------------------~g~~~~~~l~ell~~aDvV 177 (304)
++|+|||+|.||..+|..|...|++|++||+++...+...+ .+.....++++++++||+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 58999999999999999999999999999997643332222 1234556888899999999
Q ss_pred EEcCCCCh---------hhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHc
Q 021995 178 VVNTPLTE---------KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 225 (304)
Q Consensus 178 i~~~p~~~---------~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~ 225 (304)
++|+|... .....+ ++..+.++++.++|+.+.-++-..+.+.+.+.+
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDAA-RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCcccCCCcChHHHHHHH-HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 99998653 233332 456677899999999997555555666666554
No 114
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.74 E-value=5.6e-09 Score=90.07 Aligned_cols=116 Identities=18% Similarity=0.234 Sum_probs=80.7
Q ss_pred CEEEEEe-eChhhHHHHHHhccCCCeEEEEcCCCCChhHHHh-cC-------ceecCCHHhhcCcCCEEEEcCCCChhhh
Q 021995 118 KTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-TG-------AKFEEDLDTMLPKCDIVVVNTPLTEKTR 188 (304)
Q Consensus 118 ~~vgIIG-~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~-~g-------~~~~~~l~ell~~aDvVi~~~p~~~~t~ 188 (304)
++|+|+| .|.||+.+++.|...|++|.+++|++...+...+ .+ +. ..+++++++++|+|++++|. ..+.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~~~~-~~~~ 78 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVLTIPW-EHAI 78 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEECSCH-HHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEEeCCh-hhHH
Confidence 4799999 9999999999999999999999997543332222 22 33 35788888999999999994 3333
Q ss_pred ccccHHHHhcCCCCCEEEEcCCCchhc------------hHHHHHHHHcCCceEEEeecCCCCCC
Q 021995 189 GMFDKDRIAKMKKGVLIVNNARGAIMD------------TQAVVDACSSGHIAGYSGDVWNPQPA 241 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn~~rg~~vd------------~~aL~~aL~~g~i~ga~lDV~~~ep~ 241 (304)
.++ .+..+.++ +.++|+++.|--.+ .+.+.+.+.. ...++.+.+.|.
T Consensus 79 ~~~-~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~----~~~v~~~~~~~~ 137 (212)
T 1jay_A 79 DTA-RDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES----EKVVSALHTIPA 137 (212)
T ss_dssp HHH-HHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC----SCEEECCTTCCH
T ss_pred HHH-HHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC----CeEEEEccchHH
Confidence 333 23334454 89999999876532 4566666653 235677776653
No 115
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.73 E-value=4.6e-08 Score=91.91 Aligned_cols=185 Identities=10% Similarity=0.048 Sum_probs=116.3
Q ss_pred eee-ccccccchhchhHHHhc-CCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEc---CCCC-----hhHHHHHHH-
Q 021995 13 AFA-SSGFLRSSSRFSRHYAS-SGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEV---TGSN-----VVSVAEDEL- 81 (304)
Q Consensus 13 ~~~-~~~~~~~~~~~~~~l~~-~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~---~g~~-----~~~vAE~al- 81 (304)
..| -+.++...++...++.. .+.+..+.......+ ...++.+.+.|+...|. |--. -.++++.+-
T Consensus 63 ~~~~ad~i~~vksP~~~~~~~~~~g~~~~~y~~~~~~----~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~ 138 (361)
T 1pjc_A 63 DAWSREMVVKVKEPLPAEYDLMQKDQLLFTYLHLAAA----RELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGR 138 (361)
T ss_dssp HHHTSSEEECSSCCCGGGGGGCCTTCEEEECCCGGGC----HHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHH
T ss_pred HHhcCCeEEEECCCCHHHHHhhcCCCEEEEEeccccC----HHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHH
Confidence 445 23456666666666633 466656554444443 22355778889988864 3211 245555444
Q ss_pred -HHHHHHHhCcchhhHHHHhCC-cccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhc
Q 021995 82 -MRILILVRNFLPGHHQVISGE-WNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET 159 (304)
Q Consensus 82 -~~~L~~~R~~~~~~~~~~~~~-w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~ 159 (304)
+.++.... +... ..|. +.... -..+.+++|+|+|.|.+|+.+++.++.+|++|+++|+++.+.+...+.
T Consensus 139 ~a~~~gA~n-t~~~----~~g~G~~l~~----l~~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~ 209 (361)
T 1pjc_A 139 LSVQFGARF-LERQ----QGGRGVLLGG----VPGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETL 209 (361)
T ss_dssp HHHHHHHHH-TSGG----GTSCCCCTTC----BTTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHH-Hhhc----cCCCceeccC----CCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHh
Confidence 44444432 2211 1111 11011 124778999999999999999999999999999999976554444443
Q ss_pred Ccee-------cCCHHhhcCcCCEEEEcCCCCh-hhhccccHHHHhcCCCCCEEEEcCC
Q 021995 160 GAKF-------EEDLDTMLPKCDIVVVNTPLTE-KTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 160 g~~~-------~~~l~ell~~aDvVi~~~p~~~-~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
+... ..++.+.+.++|+|+.+++... .+..++.++.++.|+++++++|++-
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 210 FGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp HGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred hCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 3211 1245566778999999986532 2335567889999999999999984
No 116
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.71 E-value=3.3e-08 Score=92.82 Aligned_cols=98 Identities=13% Similarity=0.093 Sum_probs=75.7
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcC--------------ceecCCHHhhcCcCCEEEEcCC
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG--------------AKFEEDLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g--------------~~~~~~l~ell~~aDvVi~~~p 182 (304)
.++|+|||.|.||..+|..|...|++|.+|+|++...+...+.+ +....++++.++.+|+|++++|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaVp 108 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVP 108 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECCC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECCC
Confidence 46899999999999999999999999999999754433333332 2344688899999999999999
Q ss_pred CChhhhccccHHHHhcCCCCCEEEEcCCCchhch
Q 021995 183 LTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDT 216 (304)
Q Consensus 183 ~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~ 216 (304)
.. ..+.++ ++..+.++++.++|+++.|-..++
T Consensus 109 ~~-~~~~vl-~~i~~~l~~~~ivvs~~kGi~~~t 140 (356)
T 3k96_A 109 SF-AFHEVI-TRMKPLIDAKTRIAWGTKGLAKGS 140 (356)
T ss_dssp HH-HHHHHH-HHHGGGCCTTCEEEECCCSCBTTT
T ss_pred HH-HHHHHH-HHHHHhcCCCCEEEEEeCCCCcCc
Confidence 43 344443 456677889999999998766554
No 117
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=98.70 E-value=3e-08 Score=91.91 Aligned_cols=101 Identities=19% Similarity=0.310 Sum_probs=73.5
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcC-----------ceecCCHHhhcCcCCEEEEcCCCCh
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG-----------AKFEEDLDTMLPKCDIVVVNTPLTE 185 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g-----------~~~~~~l~ell~~aDvVi~~~p~~~ 185 (304)
..+|+|||.|.||..+|..|...|++|.+|+|++...+...+.| +....++++ +..+|+|++++|. .
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~-~ 91 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPV-Q 91 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCG-G
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCH-H
Confidence 45899999999999999999988999999999754444444444 355567888 8999999999994 4
Q ss_pred hhhccccHHHHhcCC-CCCEEEEcCCCchh-chHHHHHHHH
Q 021995 186 KTRGMFDKDRIAKMK-KGVLIVNNARGAIM-DTQAVVDACS 224 (304)
Q Consensus 186 ~t~~~i~~~~l~~mk-~g~ilVn~~rg~~v-d~~aL~~aL~ 224 (304)
.+ ++.+..++ ++.++|+++.|--. +.+.+.+.+.
T Consensus 92 ~~-----~~v~~~l~~~~~~vv~~~nGi~~~~~~~l~~~~~ 127 (335)
T 1z82_A 92 YI-----REHLLRLPVKPSMVLNLSKGIEIKTGKRVSEIVE 127 (335)
T ss_dssp GH-----HHHHTTCSSCCSEEEECCCCCCTTTCCCHHHHHH
T ss_pred HH-----HHHHHHhCcCCCEEEEEeCCCCCCccCcHHHHHH
Confidence 44 33444454 78999999977333 2234444443
No 118
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.70 E-value=5.5e-08 Score=92.66 Aligned_cols=106 Identities=12% Similarity=0.127 Sum_probs=78.9
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCc------------------eecCCHHhhcCcCCEEEE
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA------------------KFEEDLDTMLPKCDIVVV 179 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~------------------~~~~~l~ell~~aDvVi~ 179 (304)
++|+|||+|.||..+|..|.. |++|++||+++.+.+...+.+. ....++.+.+++||+|++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 479999999999999999998 9999999997644333333222 334567778889999999
Q ss_pred cCCCCh----------hhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcC
Q 021995 180 NTPLTE----------KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 226 (304)
Q Consensus 180 ~~p~~~----------~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g 226 (304)
|+|... .....+ ++..+ ++++.++|+.+.-++-..+.+.+.+.+.
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~ 134 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD 134 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS
T ss_pred ecCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC
Confidence 999753 233333 34556 8999999998777766677777777654
No 119
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.69 E-value=6.6e-08 Score=94.31 Aligned_cols=116 Identities=15% Similarity=0.125 Sum_probs=81.4
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHh-----------cC-------------ceecCCHHhhcC
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-----------TG-------------AKFEEDLDTMLP 172 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g-------------~~~~~~l~ell~ 172 (304)
-++|||||.|.||..+|..+...|++|++||+++...+...+ .| +....+++ .++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~ 83 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-ALA 83 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-Hhc
Confidence 358999999999999999999999999999997644333221 12 23345664 588
Q ss_pred cCCEEEEcCCCChhhhccccHHHHhcCCCCCEEE-EcCCCchhchHHHHHHHHcCCceEEEeecCC
Q 021995 173 KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIV-NNARGAIMDTQAVVDACSSGHIAGYSGDVWN 237 (304)
Q Consensus 173 ~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilV-n~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~ 237 (304)
+||+|+.++|...+.+..+-++..+.++++++|+ |+|.-++ ..+.+.+. ..-..+++..|.
T Consensus 84 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i---~~ia~~~~-~p~~~ig~hf~~ 145 (483)
T 3mog_A 84 AADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISI---TAIAAEIK-NPERVAGLHFFN 145 (483)
T ss_dssp GCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCH---HHHTTTSS-SGGGEEEEEECS
T ss_pred CCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCH---HHHHHHcc-CccceEEeeecC
Confidence 9999999999876665545466777899999994 6664433 34544443 233445666554
No 120
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.69 E-value=4.3e-08 Score=90.98 Aligned_cols=105 Identities=16% Similarity=0.191 Sum_probs=76.5
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhc-Cc--------------eecCCHHhhcCcCCEEEEcCC
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET-GA--------------KFEEDLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~-g~--------------~~~~~l~ell~~aDvVi~~~p 182 (304)
++|+|||+|.||..+|..|...|++|.+++|++...+...+. +. ....+++++++.+|+|++++|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 689999999999999999999999999999976444433333 21 234678888899999999999
Q ss_pred CChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHc
Q 021995 183 LTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 225 (304)
Q Consensus 183 ~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~ 225 (304)
.... ..++ ++..+.+++++++|++ .|.......+.+.+.+
T Consensus 85 ~~~~-~~~~-~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~ 124 (359)
T 1bg6_A 85 AIHH-ASIA-ANIASYISEGQLIILN-PGATGGALEFRKILRE 124 (359)
T ss_dssp GGGH-HHHH-HHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHH
T ss_pred chHH-HHHH-HHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHh
Confidence 6543 3343 5566778999999998 4422234445555554
No 121
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.69 E-value=2.9e-08 Score=86.67 Aligned_cols=90 Identities=18% Similarity=0.261 Sum_probs=66.8
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEE-EcCCCCChhH-HHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHH
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLY-HDRVKMDPQL-EKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKD 194 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~-~dr~~~~~~~-~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~ 194 (304)
-++|+|||+|.||..+++.|...|++|.+ ++|++...+. ..+.|.....+..+.++++|+|++++|.. .. .+
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~~-~~-----~~ 96 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPYD-SI-----AD 96 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCGG-GH-----HH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCChH-HH-----HH
Confidence 46899999999999999999989999998 9998755444 33456544445556689999999999842 22 23
Q ss_pred HHhcC--CCCCEEEEcCCCc
Q 021995 195 RIAKM--KKGVLIVNNARGA 212 (304)
Q Consensus 195 ~l~~m--k~g~ilVn~~rg~ 212 (304)
.+..+ .++.++|+++-|-
T Consensus 97 v~~~l~~~~~~ivi~~~~g~ 116 (220)
T 4huj_A 97 IVTQVSDWGGQIVVDASNAI 116 (220)
T ss_dssp HHTTCSCCTTCEEEECCCCB
T ss_pred HHHHhhccCCCEEEEcCCCC
Confidence 33333 3588999998664
No 122
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.68 E-value=2e-08 Score=92.50 Aligned_cols=105 Identities=12% Similarity=0.044 Sum_probs=76.1
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcC--CCCChhHHHhcCc-----------eecC--CHHhhcCcCCEEEEcCC
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDR--VKMDPQLEKETGA-----------KFEE--DLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr--~~~~~~~~~~~g~-----------~~~~--~l~ell~~aDvVi~~~p 182 (304)
++|+|||+|.||..+|..|...|++|++|+| ++...+...+.+. .... ++.+.++++|+|++++|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 4799999999999999999988999999999 6544444444332 3334 67788899999999999
Q ss_pred CChhhhccccHHHHhcCCCCCEEEEcCCCc---hh-chHHHHHHHHc
Q 021995 183 LTEKTRGMFDKDRIAKMKKGVLIVNNARGA---IM-DTQAVVDACSS 225 (304)
Q Consensus 183 ~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~---~v-d~~aL~~aL~~ 225 (304)
.. .+..++ .+..+ ++++.++|+++.|- -. ..+.+.+.+.+
T Consensus 81 ~~-~~~~v~-~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 81 TD-GVLPVM-SRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp GG-GHHHHH-HHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred hH-HHHHHH-HHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 64 344443 34556 88899999998775 21 33455666654
No 123
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.67 E-value=2.7e-08 Score=88.58 Aligned_cols=99 Identities=18% Similarity=0.326 Sum_probs=71.5
Q ss_pred CCEEEEEeeChhhHHHHHHhccCC----CeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhcccc
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFN----CNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G----~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~ 192 (304)
.++|+|||+|.||+.+++.|...| ++|.+|||++.. .|+....+++++++++|+|++++|. .....++
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~g~~~~~~~~~~~~~~D~vi~~v~~-~~~~~v~- 75 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN------TTLNYMSSNEELARHCDIIVCAVKP-DIAGSVL- 75 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------SSSEECSCHHHHHHHCSEEEECSCT-TTHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------CceEEeCCHHHHHhcCCEEEEEeCH-HHHHHHH-
Confidence 458999999999999999998888 689999997644 4677667888999999999999994 3444443
Q ss_pred HHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcC
Q 021995 193 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 226 (304)
Q Consensus 193 ~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g 226 (304)
.+..+.+ ++.++|....|- +.+.+.+.+..+
T Consensus 76 ~~l~~~l-~~~~vv~~~~gi--~~~~l~~~~~~~ 106 (262)
T 2rcy_A 76 NNIKPYL-SSKLLISICGGL--NIGKLEEMVGSE 106 (262)
T ss_dssp HHSGGGC-TTCEEEECCSSC--CHHHHHHHHCTT
T ss_pred HHHHHhc-CCCEEEEECCCC--CHHHHHHHhCCC
Confidence 2344455 455566555443 334566666543
No 124
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.63 E-value=4.6e-08 Score=88.86 Aligned_cols=108 Identities=13% Similarity=0.149 Sum_probs=74.8
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec------------CCHHhhcC---cCCEEEEcCC
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE------------EDLDTMLP---KCDIVVVNTP 182 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~------------~~l~ell~---~aDvVi~~~p 182 (304)
++|+|||.|.||..+|..|...|++|++|+|++...+...+.|.... .+.+++.+ ++|+|++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 58999999999999999999999999999997644444444443211 13334444 8999999999
Q ss_pred CChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCc
Q 021995 183 LTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHI 228 (304)
Q Consensus 183 ~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i 228 (304)
. ..+..++ ++..+.++++.++|+++.|-- ..+.+.+.+.+.++
T Consensus 84 ~-~~~~~v~-~~l~~~l~~~~~iv~~~~g~~-~~~~l~~~~~~~~v 126 (316)
T 2ew2_A 84 A-QQLDAMF-KAIQPMITEKTYVLCLLNGLG-HEDVLEKYVPKENI 126 (316)
T ss_dssp H-HHHHHHH-HHHGGGCCTTCEEEECCSSSC-THHHHTTTSCGGGE
T ss_pred c-ccHHHHH-HHHHHhcCCCCEEEEecCCCC-cHHHHHHHcCCccE
Confidence 4 3444444 455667889999999987532 23455555544433
No 125
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=98.62 E-value=1.4e-08 Score=95.07 Aligned_cols=95 Identities=21% Similarity=0.278 Sum_probs=71.3
Q ss_pred EEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcC--------------ceecCCHHhhcCcCCEEEEcCCCC
Q 021995 119 TVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG--------------AKFEEDLDTMLPKCDIVVVNTPLT 184 (304)
Q Consensus 119 ~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g--------------~~~~~~l~ell~~aDvVi~~~p~~ 184 (304)
+|+|||+|.||..+|..|...|++|.+|+|++...+...+.+ +....+++++++.+|+|++++|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~- 95 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT- 95 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh-
Confidence 899999999999999999999999999999754333333322 34446788889999999999994
Q ss_pred hhhhccccHH---HHhcCCC-CCEEEEcCCCchh
Q 021995 185 EKTRGMFDKD---RIAKMKK-GVLIVNNARGAIM 214 (304)
Q Consensus 185 ~~t~~~i~~~---~l~~mk~-g~ilVn~~rg~~v 214 (304)
.....++... ....+++ +.++|+++.|-..
T Consensus 96 ~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~ 129 (366)
T 1evy_A 96 QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIER 129 (366)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCT
T ss_pred HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCC
Confidence 4444444220 4455778 8999999877444
No 126
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=98.62 E-value=4.3e-08 Score=91.12 Aligned_cols=95 Identities=13% Similarity=0.081 Sum_probs=71.7
Q ss_pred CCEEEEEeeChhhHHHHHHhccCC-------CeEEEEcCCCC-----ChhHHHhc--------------CceecCCHHhh
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFN-------CNLLYHDRVKM-----DPQLEKET--------------GAKFEEDLDTM 170 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G-------~~V~~~dr~~~-----~~~~~~~~--------------g~~~~~~l~el 170 (304)
.++|+|||.|.||..+|..|...| ++|.+|+|++. ..+...+. ++....++++.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQA 87 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHH
Confidence 458999999999999999998878 89999999765 33332221 23334678888
Q ss_pred cCcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCch
Q 021995 171 LPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAI 213 (304)
Q Consensus 171 l~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~ 213 (304)
++++|+|++++|. ..+..++ ++..+.+++++++|+++.|-.
T Consensus 88 ~~~aD~Vilav~~-~~~~~v~-~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 88 AEDADILIFVVPH-QFIGKIC-DQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp HTTCSEEEECCCG-GGHHHHH-HHHTTCSCTTCEEEECCCCBC
T ss_pred HcCCCEEEEeCCH-HHHHHHH-HHHHhhCCCCCEEEEECCccC
Confidence 9999999999995 3444443 355567789999999998754
No 127
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=98.62 E-value=3.5e-08 Score=92.84 Aligned_cols=94 Identities=11% Similarity=0.167 Sum_probs=70.6
Q ss_pred CEEEEEeeChhhHHHHHHhccCC-------CeEEEEcCCCC-----ChhHHHhc--------------CceecCCHHhhc
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFN-------CNLLYHDRVKM-----DPQLEKET--------------GAKFEEDLDTML 171 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G-------~~V~~~dr~~~-----~~~~~~~~--------------g~~~~~~l~ell 171 (304)
++|+|||.|.||..+|..|...| ++|++|+|++. ..+...+. ++....++++++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~ 101 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVI 101 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHH
Confidence 47999999999999999998778 89999999765 33333221 234456788888
Q ss_pred CcCCEEEEcCCCChhhhccccHHHHh----cCCCCCEEEEcCCCch
Q 021995 172 PKCDIVVVNTPLTEKTRGMFDKDRIA----KMKKGVLIVNNARGAI 213 (304)
Q Consensus 172 ~~aDvVi~~~p~~~~t~~~i~~~~l~----~mk~g~ilVn~~rg~~ 213 (304)
+++|+|++++|. .....++ .+..+ .+++++++|+++.|-.
T Consensus 102 ~~aDvVilav~~-~~~~~vl-~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 102 NDADLLIFIVPC-QYLESVL-ASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp TTCSEEEECCCH-HHHHHHH-HHHTC---CCCCTTCEEEECCCSCE
T ss_pred cCCCEEEEcCCH-HHHHHHH-HHHhhhhhccCCCCCEEEEeCCccc
Confidence 999999999994 4444443 34445 6788999999988743
No 128
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.61 E-value=6.2e-08 Score=94.38 Aligned_cols=107 Identities=12% Similarity=0.161 Sum_probs=76.2
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhc--------------------CceecCCHHhhcCcCCE
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET--------------------GAKFEEDLDTMLPKCDI 176 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~--------------------g~~~~~~l~ell~~aDv 176 (304)
.++|+|||+|.||..+|..|...|++|++||+++...+...+. ......++++.++.||+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 4699999999999999999999999999999975433322221 13445677788889999
Q ss_pred EEEcCCCC---------hhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHH
Q 021995 177 VVVNTPLT---------EKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACS 224 (304)
Q Consensus 177 Vi~~~p~~---------~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~ 224 (304)
|++|+|.. ...+..+ ++..+.+++++++|+.+.-++=..+.+.+.+.
T Consensus 88 viiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~ 143 (478)
T 2y0c_A 88 QFIAVGTPPDEDGSADLQYVLAAA-RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVA 143 (478)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHH
T ss_pred EEEEeCCCcccCCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHH
Confidence 99999863 2333333 45567789999999998543433444544444
No 129
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=98.59 E-value=1.4e-07 Score=85.27 Aligned_cols=104 Identities=16% Similarity=0.122 Sum_probs=74.4
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHHHH
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRI 196 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~l 196 (304)
|+++.|+|.|.+|+.++..|...|.+|++++|+..+.+...+.++... +++++ .++|+|+.++|........++.+.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~-~~~~l-~~~DiVInaTp~Gm~~~~~l~~~~l 195 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCF-MEPPK-SAFDLIINATSASLHNELPLNKEVL 195 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEE-SSCCS-SCCSEEEECCTTCCCCSCSSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEe-cHHHh-ccCCEEEEcccCCCCCCCCCChHHH
Confidence 899999999999999999999999999999999876654446665443 44444 3899999999975332223555533
Q ss_pred h-cCCCCCEEEEcCCCchhchHHHHHHHHc
Q 021995 197 A-KMKKGVLIVNNARGAIMDTQAVVDACSS 225 (304)
Q Consensus 197 ~-~mk~g~ilVn~~rg~~vd~~aL~~aL~~ 225 (304)
. .++++.+++|+...+ .+. |.++.++
T Consensus 196 ~~~l~~~~~v~D~vY~P--~T~-ll~~A~~ 222 (269)
T 3phh_A 196 KGYFKEGKLAYDLAYGF--LTP-FLSLAKE 222 (269)
T ss_dssp HHHHHHCSEEEESCCSS--CCH-HHHHHHH
T ss_pred HhhCCCCCEEEEeCCCC--chH-HHHHHHH
Confidence 2 567788888887765 444 4443333
No 130
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.58 E-value=4e-07 Score=88.31 Aligned_cols=116 Identities=13% Similarity=0.167 Sum_probs=78.0
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHh-----------cC-----------ceecCCHHhhcCcC
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-----------TG-----------AKFEEDLDTMLPKC 174 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g-----------~~~~~~l~ell~~a 174 (304)
-++|+|||.|.||..+|..+...|++|++||+++...+...+ .| .....++ +.+++|
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 468999999999999999999999999999997643322211 01 1223466 568899
Q ss_pred CEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecC
Q 021995 175 DIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVW 236 (304)
Q Consensus 175 DvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~ 236 (304)
|+|+.++|...+....+-++..+.++++++|+....+- ....|.+.+.. .-..+++..|
T Consensus 116 DlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~--~~~~la~~~~~-~~~~ig~hf~ 174 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSAL--NVDDIASSTDR-PQLVIGTHFF 174 (463)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS--CHHHHHTTSSC-GGGEEEEEEC
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCc--CHHHHHHHhcC-CcceEEeecC
Confidence 99999999765444444455667789999998744433 33356655532 2233455545
No 131
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.56 E-value=1.3e-07 Score=76.96 Aligned_cols=103 Identities=13% Similarity=0.174 Sum_probs=79.2
Q ss_pred cCCCEEEEEee----ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhcc
Q 021995 115 LEGKTVGTVGC----GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGM 190 (304)
Q Consensus 115 L~g~~vgIIG~----G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~ 190 (304)
..-++|+|||. |.+|+.+++.|...|++|+.+|++.. + -.|...+.+++|+....|++++++| .+....+
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~--~---i~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v 85 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYD--E---IEGLKCYRSVRELPKDVDVIVFVVP-PKVGLQV 85 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS--E---ETTEECBSSGGGSCTTCCEEEECSC-HHHHHHH
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCC--e---ECCeeecCCHHHhCCCCCEEEEEeC-HHHHHHH
Confidence 46679999999 99999999999999999888887642 1 1477777899999999999999999 4555555
Q ss_pred ccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 191 FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 191 i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
+. +..+ ++.+.++++.+. ..+++.+..++..+.
T Consensus 86 ~~-~~~~-~g~~~i~~~~~~----~~~~l~~~a~~~Gi~ 118 (138)
T 1y81_A 86 AK-EAVE-AGFKKLWFQPGA----ESEEIRRFLEKAGVE 118 (138)
T ss_dssp HH-HHHH-TTCCEEEECTTS----CCHHHHHHHHHHTCE
T ss_pred HH-HHHH-cCCCEEEEcCcc----HHHHHHHHHHHCCCE
Confidence 53 4444 566777777753 368888888887776
No 132
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.55 E-value=1.4e-07 Score=91.73 Aligned_cols=105 Identities=15% Similarity=0.148 Sum_probs=77.8
Q ss_pred CCEEEEEeeChhhHHHHHHhccC-CC-eEEEEcCCCC----ChhHHHh---------------------cC-ceecCCHH
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPF-NC-NLLYHDRVKM----DPQLEKE---------------------TG-AKFEEDLD 168 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~-G~-~V~~~dr~~~----~~~~~~~---------------------~g-~~~~~~l~ 168 (304)
-++|+|||+|.||..+|..|... |+ +|++||+++. ..+...+ .+ ....++ .
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd-~ 96 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD-F 96 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC-G
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc-H
Confidence 36899999999999999999999 99 9999999876 3222211 12 233345 6
Q ss_pred hhcCcCCEEEEcCCCCh--------hhhccc--cHHHHhcCCCCCEEEEcCCCchhchHHHHHH
Q 021995 169 TMLPKCDIVVVNTPLTE--------KTRGMF--DKDRIAKMKKGVLIVNNARGAIMDTQAVVDA 222 (304)
Q Consensus 169 ell~~aDvVi~~~p~~~--------~t~~~i--~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~a 222 (304)
+.+++||+|++|+|... +...+. .+...+.+++|.++|+.|.-++-..+.+.+.
T Consensus 97 ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ 160 (478)
T 3g79_A 97 SRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQ 160 (478)
T ss_dssp GGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHH
T ss_pred HHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHH
Confidence 78899999999998652 222222 2466778999999999998777777777753
No 133
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.54 E-value=7.7e-08 Score=93.78 Aligned_cols=107 Identities=10% Similarity=0.115 Sum_probs=78.1
Q ss_pred CEEEEEeeChhhHHHHHHhccC--CCeEEEEcCCCCChhHHHh-------------------cCceecCCHHhhcCcCCE
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF--NCNLLYHDRVKMDPQLEKE-------------------TGAKFEEDLDTMLPKCDI 176 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~--G~~V~~~dr~~~~~~~~~~-------------------~g~~~~~~l~ell~~aDv 176 (304)
++|+|||+|.||..+|..|... |++|++||+++.+.+...+ .+.....++.+.+++||+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 5899999999999999999876 7999999987533322221 023444567788889999
Q ss_pred EEEcCCCChh--------------hhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHc
Q 021995 177 VVVNTPLTEK--------------TRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 225 (304)
Q Consensus 177 Vi~~~p~~~~--------------t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~ 225 (304)
|++|+|.... .... -++..+.++++.++|+.|.-++-..+.+.+.+.+
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~~-~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVESV-SRTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHH-HHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEecCCccccccccccCCCcHHHHHHH-HHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 9999985431 2222 2456677899999999887666556677777776
No 134
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.53 E-value=2.2e-07 Score=94.71 Aligned_cols=117 Identities=12% Similarity=0.095 Sum_probs=79.7
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHH-----------HhcC-------------ceecCCHHhhcC
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLE-----------KETG-------------AKFEEDLDTMLP 172 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~-----------~~~g-------------~~~~~~l~ell~ 172 (304)
-++|||||.|.||..+|..+...|++|++||+++...+.. .+.| +....++ +.++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~ 392 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFG 392 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGG
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHC
Confidence 3579999999999999999999999999999976433221 1112 2334566 6788
Q ss_pred cCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCC
Q 021995 173 KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWN 237 (304)
Q Consensus 173 ~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~ 237 (304)
+||+|+.++|.+.+.+..+-.+..+.++++++|+..+.+- ....+.+.+. ..-..+++..|.
T Consensus 393 ~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl--~i~~la~~~~-~~~~~ig~hf~~ 454 (715)
T 1wdk_A 393 NVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTI--SISLLAKALK-RPENFVGMHFFN 454 (715)
T ss_dssp GCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSS--CHHHHGGGCS-CGGGEEEEECCS
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCC--CHHHHHHHhc-CccceEEEEccC
Confidence 9999999999877665555456777889999998544433 2334554442 222334555443
No 135
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=98.51 E-value=8e-08 Score=86.32 Aligned_cols=92 Identities=17% Similarity=0.186 Sum_probs=67.3
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcC---c----e-ecCCHHhhcCcCCEEEEcCCCChhhhc
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG---A----K-FEEDLDTMLPKCDIVVVNTPLTEKTRG 189 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g---~----~-~~~~l~ell~~aDvVi~~~p~~~~t~~ 189 (304)
++|+|||+|.||..+|..|...|++|++|+|++...+.....+ . . ..++ .+.++++|+|++++|... +..
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~v~~~~-~~~ 78 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAND-PDFLATSDLLLVTLKAWQ-VSD 78 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESC-HHHHHTCSEEEECSCGGG-HHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecC-ccccCCCCEEEEEecHHh-HHH
Confidence 4799999999999999999999999999999765433222211 1 0 1233 456778999999999653 444
Q ss_pred cccHHHHhcCCCCCEEEEcCCCc
Q 021995 190 MFDKDRIAKMKKGVLIVNNARGA 212 (304)
Q Consensus 190 ~i~~~~l~~mk~g~ilVn~~rg~ 212 (304)
++ ++..+.++++.++|++..|-
T Consensus 79 v~-~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 79 AV-KSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp HH-HHHHTTSCTTSCEEEECSSS
T ss_pred HH-HHHHhhCCCCCEEEEecCCC
Confidence 44 45667788999999987653
No 136
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.50 E-value=2.8e-07 Score=81.18 Aligned_cols=99 Identities=21% Similarity=0.286 Sum_probs=74.2
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeE-EEEcCCCCChhHHHhcCceecCCHHhhc-CcCCEEEEcCCCChhhhccccHHH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNL-LYHDRVKMDPQLEKETGAKFEEDLDTML-PKCDIVVVNTPLTEKTRGMFDKDR 195 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V-~~~dr~~~~~~~~~~~g~~~~~~l~ell-~~aDvVi~~~p~~~~t~~~i~~~~ 195 (304)
.+|||||+|.||+.+++.+...|+++ .++|++.. .+. .+.++++++ .++|+|++|+|..... +..
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~-~~~-------~~~~~~~l~~~~~DvVv~~~~~~~~~-----~~~ 67 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGE-HEK-------MVRGIDEFLQREMDVAVEAASQQAVK-----DYA 67 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-CTT-------EESSHHHHTTSCCSEEEECSCHHHHH-----HHH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcc-hhh-------hcCCHHHHhcCCCCEEEECCCHHHHH-----HHH
Confidence 37999999999999999998789997 68998742 211 456899999 6999999999943221 233
Q ss_pred HhcCCCCCEEEEcCCCchhch---HHHHHHHHcCCce
Q 021995 196 IAKMKKGVLIVNNARGAIMDT---QAVVDACSSGHIA 229 (304)
Q Consensus 196 l~~mk~g~ilVn~~rg~~vd~---~aL~~aL~~g~i~ 229 (304)
...++.|..+|+.+.+..-+. +.|.++.++....
T Consensus 68 ~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~ 104 (236)
T 2dc1_A 68 EKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRR 104 (236)
T ss_dssp HHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCC
T ss_pred HHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCe
Confidence 456788999999988776655 5677777664443
No 137
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=98.50 E-value=5.4e-08 Score=87.84 Aligned_cols=87 Identities=16% Similarity=0.124 Sum_probs=59.4
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeE-EEEcCCCCChhHH-HhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHHH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNL-LYHDRVKMDPQLE-KETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 195 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V-~~~dr~~~~~~~~-~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~ 195 (304)
++|||||+|.||+.+++.|... ++| .+||+++...+.. ...+. ...+++++++++|+|++++|.... .+.
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~DvVilav~~~~~------~~v 74 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-KAATLEKHPELNGVVFVIVPDRYI------KTV 74 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-CCCSSCCCCC---CEEECSCTTTH------HHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-ccCCHHHHHhcCCEEEEeCChHHH------HHH
Confidence 4799999999999999999877 888 5899976443333 24465 556788888999999999996531 344
Q ss_pred HhcC-CCCCEEEEcCCCc
Q 021995 196 IAKM-KKGVLIVNNARGA 212 (304)
Q Consensus 196 l~~m-k~g~ilVn~~rg~ 212 (304)
+..+ +++.++||++-+.
T Consensus 75 ~~~l~~~~~ivi~~s~~~ 92 (276)
T 2i76_A 75 ANHLNLGDAVLVHCSGFL 92 (276)
T ss_dssp HTTTCCSSCCEEECCSSS
T ss_pred HHHhccCCCEEEECCCCC
Confidence 4445 6889999998553
No 138
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.48 E-value=9.7e-08 Score=86.62 Aligned_cols=108 Identities=14% Similarity=0.145 Sum_probs=72.9
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHHHh-cCceecCCHHhhcCcCCEEEEcCCCC--hhhhc
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKE-TGAKFEEDLDTMLPKCDIVVVNTPLT--EKTRG 189 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~~~-~g~~~~~~l~ell~~aDvVi~~~p~~--~~t~~ 189 (304)
++.|+++.|+|.|.+|+.++..|...|+ +|++++|+..+.+.... ......+++.++++++|+|+.++|.. +....
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~ 193 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTDS 193 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------CC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCcC
Confidence 5789999999999999999999999999 89999998643332211 11122345667788999999999964 22222
Q ss_pred cccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcC
Q 021995 190 MFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 226 (304)
Q Consensus 190 ~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g 226 (304)
.++ .+.++++.+++|+...+. .+ .|.++.++.
T Consensus 194 ~l~---~~~l~~~~~V~D~vY~P~-~T-~ll~~A~~~ 225 (277)
T 3don_A 194 VIS---LNRLASHTLVSDIVYNPY-KT-PILIEAEQR 225 (277)
T ss_dssp SSC---CTTCCSSCEEEESCCSSS-SC-HHHHHHHHT
T ss_pred CCC---HHHcCCCCEEEEecCCCC-CC-HHHHHHHHC
Confidence 232 355789999999986643 23 344444443
No 139
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.48 E-value=5.7e-07 Score=91.80 Aligned_cols=116 Identities=12% Similarity=0.076 Sum_probs=78.1
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHh-----------cC-------------ceecCCHHhhcCc
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-----------TG-------------AKFEEDLDTMLPK 173 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g-------------~~~~~~l~ell~~ 173 (304)
++|+|||.|.||..+|..+...|++|++||+++...+.... .| +....++ +.+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 391 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRD 391 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTT
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCC
Confidence 68999999999999999999999999999997643322111 11 2234456 56899
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCC
Q 021995 174 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWN 237 (304)
Q Consensus 174 aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~ 237 (304)
||+|+.++|...+.+..+-.+..+.++++++++..+.+-.+ ..+.+.+. ..-..+++..|.
T Consensus 392 aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i--~~la~~~~-~p~~~iG~hf~~ 452 (725)
T 2wtb_A 392 VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDL--NKIGERTK-SQDRIVGAHFFS 452 (725)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCH--HHHTTTCS-CTTTEEEEEECS
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCH--HHHHHHhc-CCCCEEEecCCC
Confidence 99999999987665554545667788999999654443323 34544442 222334555454
No 140
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.47 E-value=2.7e-07 Score=88.67 Aligned_cols=110 Identities=16% Similarity=0.141 Sum_probs=76.4
Q ss_pred cCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCc-eecCCHHhh---------------cCcCCEEE
Q 021995 115 LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA-KFEEDLDTM---------------LPKCDIVV 178 (304)
Q Consensus 115 L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~-~~~~~l~el---------------l~~aDvVi 178 (304)
-+|+++.|||+|.||..+|..|...|++|++||+++.+.+...+... .+...++++ +++||+|+
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvi 88 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFI 88 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEE
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEE
Confidence 47889999999999999999999999999999998644443332111 011122222 46799999
Q ss_pred EcCCCChhhh--------ccc--cHHHHhcCCCCCEEEEcCCCchhchHHHHHHHH
Q 021995 179 VNTPLTEKTR--------GMF--DKDRIAKMKKGVLIVNNARGAIMDTQAVVDACS 224 (304)
Q Consensus 179 ~~~p~~~~t~--------~~i--~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~ 224 (304)
+|+|...... .+. .+...+.|++|.++|+.|.-++-..+.+.+.+.
T Consensus 89 i~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~ 144 (431)
T 3ojo_A 89 IAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVI 144 (431)
T ss_dssp ECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHH
T ss_pred EEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHH
Confidence 9999654211 122 245677899999999999888777777776543
No 141
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.46 E-value=1.2e-07 Score=79.91 Aligned_cols=95 Identities=16% Similarity=0.173 Sum_probs=68.5
Q ss_pred cccCCCEEEEEeeChhhHHHHHHhccC-CCeEEEEcCCCCChhHHHhcCceec----CC---HHhh--cCcCCEEEEcCC
Q 021995 113 YDLEGKTVGTVGCGRIGKLLLQRLKPF-NCNLLYHDRVKMDPQLEKETGAKFE----ED---LDTM--LPKCDIVVVNTP 182 (304)
Q Consensus 113 ~~L~g~~vgIIG~G~IG~~lA~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~~----~~---l~el--l~~aDvVi~~~p 182 (304)
.++.+++|+|+|+|.+|+.+++.|+.. |++|+++|+++...+...+.|+... .+ +.++ +.++|+|++++|
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence 357788999999999999999999998 9999999997655555555565422 12 3444 778999999998
Q ss_pred CChhhhccccHHHHhcCCCCCEEEEcC
Q 021995 183 LTEKTRGMFDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 183 ~~~~t~~~i~~~~l~~mk~g~ilVn~~ 209 (304)
..+.+..++ ..++.+.+...+|...
T Consensus 115 ~~~~~~~~~--~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 115 HHQGNQTAL--EQLQRRNYKGQIAAIA 139 (183)
T ss_dssp SHHHHHHHH--HHHHHTTCCSEEEEEE
T ss_pred ChHHHHHHH--HHHHHHCCCCEEEEEE
Confidence 655443332 3556666666666543
No 142
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.45 E-value=1.7e-07 Score=83.94 Aligned_cols=106 Identities=19% Similarity=0.170 Sum_probs=75.7
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHH-HhcCceecCCHHhhcCcCCEEEEcCCCChhh-hcc
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLE-KETGAKFEEDLDTMLPKCDIVVVNTPLTEKT-RGM 190 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~-~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t-~~~ 190 (304)
.+.| +++|||.|.+|++++..|...|+ +|++++|+..+.+.. .+.+....+++.+.++++|+|+.++|..-.. ...
T Consensus 106 ~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~~~~ 184 (253)
T 3u62_A 106 EVKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEELP 184 (253)
T ss_dssp CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSCCCS
T ss_pred CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCCCCC
Confidence 3678 99999999999999999999999 899999975322211 1222234557778889999999999864211 123
Q ss_pred ccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcC
Q 021995 191 FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 226 (304)
Q Consensus 191 i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g 226 (304)
++.+. ++++.+++|+.-+ .+.-|.++.+.|
T Consensus 185 i~~~~---l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 185 VSDDS---LKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp CCHHH---HTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred CCHHH---hCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 44433 5789999999988 555555666555
No 143
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.44 E-value=3.8e-07 Score=83.47 Aligned_cols=112 Identities=16% Similarity=0.275 Sum_probs=77.1
Q ss_pred cccCCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChh-HHHhcCc---eec--CCHHhhcCcCCEEEEcCCCCh
Q 021995 113 YDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQ-LEKETGA---KFE--EDLDTMLPKCDIVVVNTPLTE 185 (304)
Q Consensus 113 ~~L~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~-~~~~~g~---~~~--~~l~ell~~aDvVi~~~p~~~ 185 (304)
.++.|++++|+|.|.+|+.++..|...|+ +|++++|+..+.+ .++..+. ... +++.+.+.++|+|+.++|...
T Consensus 137 ~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~ 216 (297)
T 2egg_A 137 ITLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGM 216 (297)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTC
T ss_pred CCCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCC
Confidence 35789999999999999999999999998 8999999764333 3333332 211 246677889999999999654
Q ss_pred hhh--c-cccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 186 KTR--G-MFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 186 ~t~--~-~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
... . .++ ...++++.+++|++..+ ..+ .|.+..++..+.
T Consensus 217 ~~~~~~~~i~---~~~l~~~~~v~D~~y~P-~~T-~ll~~A~~~G~~ 258 (297)
T 2egg_A 217 HPRVEVQPLS---LERLRPGVIVSDIIYNP-LET-KWLKEAKARGAR 258 (297)
T ss_dssp SSCCSCCSSC---CTTCCTTCEEEECCCSS-SSC-HHHHHHHHTTCE
T ss_pred CCCCCCCCCC---HHHcCCCCEEEEcCCCC-CCC-HHHHHHHHCcCE
Confidence 211 1 122 24578899999998753 233 355555554443
No 144
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.43 E-value=2.2e-07 Score=76.17 Aligned_cols=103 Identities=16% Similarity=0.115 Sum_probs=78.6
Q ss_pred CCEEEEEee----ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhcccc
Q 021995 117 GKTVGTVGC----GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 117 g~~vgIIG~----G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~ 192 (304)
-++|+|||+ |.+|..+++.|...|++|+.+|++....+ -.|...+.+++++....|++++++|. +....++.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~---i~G~~~~~sl~el~~~~Dlvii~vp~-~~v~~v~~ 88 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKT---LLGQQGYATLADVPEKVDMVDVFRNS-EAAWGVAQ 88 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSE---ETTEECCSSTTTCSSCCSEEECCSCS-THHHHHHH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccc---cCCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHHH
Confidence 568999999 89999999999999999888887541011 14777777899998899999999994 55556653
Q ss_pred HHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 193 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 193 ~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
+..+ ...+.++++.+.- ++++.+++++..+.
T Consensus 89 -~~~~-~g~~~i~i~~~~~----~~~l~~~a~~~Gi~ 119 (145)
T 2duw_A 89 -EAIA-IGAKTLWLQLGVI----NEQAAVLAREAGLS 119 (145)
T ss_dssp -HHHH-HTCCEEECCTTCC----CHHHHHHHHTTTCE
T ss_pred -HHHH-cCCCEEEEcCChH----HHHHHHHHHHcCCE
Confidence 3444 5666777776422 78899999988777
No 145
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.43 E-value=3.1e-07 Score=81.10 Aligned_cols=70 Identities=11% Similarity=0.164 Sum_probs=56.9
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHHHH
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRI 196 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~l 196 (304)
-++|||||+|.||..+|+.|+..|++|.+|++. ++ +++|| ++++|.. ....++ .+..
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~------------------~~-~~~aD--ilavP~~-ai~~vl-~~l~ 62 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP------------------ED-IRDFE--LVVIDAH-GVEGYV-EKLS 62 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG------------------GG-GGGCS--EEEECSS-CHHHHH-HHHH
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH------------------HH-hccCC--EEEEcHH-HHHHHH-HHHH
Confidence 368999999999999999999999999999972 12 46789 7888875 444444 4666
Q ss_pred hcCCCCCEEEEcC
Q 021995 197 AKMKKGVLIVNNA 209 (304)
Q Consensus 197 ~~mk~g~ilVn~~ 209 (304)
+.+++++++++++
T Consensus 63 ~~l~~g~ivvd~s 75 (232)
T 3dfu_A 63 AFARRGQMFLHTS 75 (232)
T ss_dssp TTCCTTCEEEECC
T ss_pred HhcCCCCEEEEEC
Confidence 7789999999985
No 146
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.41 E-value=4.7e-07 Score=86.31 Aligned_cols=96 Identities=24% Similarity=0.347 Sum_probs=76.5
Q ss_pred cccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCC------CChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChh
Q 021995 113 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVK------MDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEK 186 (304)
Q Consensus 113 ~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~------~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~ 186 (304)
.-|+||+|+|||+|+-|++-|..|+..|.+|++--|.. .+...+.+.|.... +.+|+.+.||+|++.+|...+
T Consensus 33 ~~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~-~~~eA~~~ADvV~~L~PD~~q 111 (491)
T 3ulk_A 33 SYLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVG-TYEELIPQADLVINLTPDKQH 111 (491)
T ss_dssp GGGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEE-EHHHHGGGCSEEEECSCGGGH
T ss_pred HHHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEec-CHHHHHHhCCEEEEeCChhhH
Confidence 35899999999999999999999999999988765521 22345666787765 799999999999999996544
Q ss_pred hhccccHHHHhcCCCCCEEEEcCCCc
Q 021995 187 TRGMFDKDRIAKMKKGVLIVNNARGA 212 (304)
Q Consensus 187 t~~~i~~~~l~~mk~g~ilVn~~rg~ 212 (304)
. .+. ++..+.||+|+.|. .+.|-
T Consensus 112 ~-~vy-~~I~p~lk~G~~L~-faHGF 134 (491)
T 3ulk_A 112 S-DVV-RTVQPLMKDGAALG-YSHGF 134 (491)
T ss_dssp H-HHH-HHHGGGSCTTCEEE-ESSCH
T ss_pred H-HHH-HHHHhhCCCCCEEE-ecCcc
Confidence 3 333 56899999999987 56665
No 147
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.40 E-value=6.6e-07 Score=73.44 Aligned_cols=98 Identities=15% Similarity=0.131 Sum_probs=65.7
Q ss_pred cccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHH-hcCceec----CC---HHhh-cCcCCEEEEcCCC
Q 021995 113 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-ETGAKFE----ED---LDTM-LPKCDIVVVNTPL 183 (304)
Q Consensus 113 ~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~----~~---l~el-l~~aDvVi~~~p~ 183 (304)
..+.+++|.|+|+|.+|+.+++.|+..|++|+++++++...+... ..|.... .+ +.+. +.++|+|++++|.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTND 94 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSC
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCC
Confidence 457789999999999999999999999999999999765444444 4454321 12 2333 6789999999986
Q ss_pred ChhhhccccHHHHhcCCCCCEEEEcCCCc
Q 021995 184 TEKTRGMFDKDRIAKMKKGVLIVNNARGA 212 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~mk~g~ilVn~~rg~ 212 (304)
...+..+ ......+.+...+|-..++.
T Consensus 95 ~~~~~~~--~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 95 DSTNFFI--SMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp HHHHHHH--HHHHHHTSCCSEEEEECSSG
T ss_pred cHHHHHH--HHHHHHHCCCCeEEEEECCH
Confidence 4433222 23444445556666665554
No 148
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=98.39 E-value=9.8e-07 Score=80.47 Aligned_cols=135 Identities=19% Similarity=0.266 Sum_probs=90.7
Q ss_pred ccccCCCEEEEEeeCh-hhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhcc
Q 021995 112 AYDLEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGM 190 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~-IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~ 190 (304)
+.++.|+++.|||.|. +|+.+|+.|...|++|+++++. ..++.+.+++||+|+.+++.. ++
T Consensus 160 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~--------------t~~L~~~~~~ADIVI~Avg~p----~~ 221 (301)
T 1a4i_A 160 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK--------------TAHLDEEVNKGDILVVATGQP----EM 221 (301)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------CSSHHHHHTTCSEEEECCCCT----TC
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC--------------cccHHHHhccCCEEEECCCCc----cc
Confidence 4578999999999996 6999999999999999999753 247899999999999999852 46
Q ss_pred ccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcC-CceEEEeecCCCCCCCCCCCccCCCCeEEccCCCcCCHHHHHH
Q 021995 191 FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG-HIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLR 269 (304)
Q Consensus 191 i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g-~i~ga~lDV~~~ep~~~~~~l~~~~nv~lTPHia~~t~e~~~~ 269 (304)
+..+. +|+|+++||+|...+-|.. -++| ++-| ||-..+- . -.--.+||=-+|--.-+...
T Consensus 222 I~~~~---vk~GavVIDVgi~~~~d~~-----~~~g~klvG---DVdf~~v-------~-~~a~~iTPVPGGVGpmTiam 282 (301)
T 1a4i_A 222 VKGEW---IKPGAIVIDCGINYVPDDK-----KPNGRKVVG---DVAYDEA-------K-ERASFITPVPGGVGPMTVAM 282 (301)
T ss_dssp BCGGG---SCTTCEEEECCCBC---------------CCBC---SBCHHHH-------T-TTCSEECCSSSSHHHHHHHH
T ss_pred CCHHH---cCCCcEEEEccCCCccccc-----ccCCCeeec---cccHHHh-------h-hhceEeCCCCCCccHHHHHH
Confidence 76665 5899999999987643321 1123 3332 5532211 0 01346889777765555555
Q ss_pred HHHHHHHHHHHHHc
Q 021995 270 YAAGVKDMLDRYFK 283 (304)
Q Consensus 270 ~~~~~~~~l~~~~~ 283 (304)
+...+++..++++.
T Consensus 283 Ll~Ntv~aa~~~~~ 296 (301)
T 1a4i_A 283 LMQSTVESAKRFLE 296 (301)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhh
Confidence 55555555555443
No 149
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.39 E-value=7.2e-07 Score=80.80 Aligned_cols=80 Identities=23% Similarity=0.321 Sum_probs=67.5
Q ss_pred ccccCCCEEEEEeeCh-hhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhcc
Q 021995 112 AYDLEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGM 190 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~-IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~ 190 (304)
+.++.|+++.|||.|. +|+.+|..|...|++|++++++. .++++.+++||+|+.+++. .++
T Consensus 156 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------~~L~~~~~~ADIVI~Avg~----p~~ 217 (285)
T 3l07_A 156 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT--------------TDLKSHTTKADILIVAVGK----PNF 217 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SSHHHHHTTCSEEEECCCC----TTC
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHhcccCCEEEECCCC----CCC
Confidence 3578999999999988 69999999999999999997632 3788999999999999983 345
Q ss_pred ccHHHHhcCCCCCEEEEcCCCc
Q 021995 191 FDKDRIAKMKKGVLIVNNARGA 212 (304)
Q Consensus 191 i~~~~l~~mk~g~ilVn~~rg~ 212 (304)
+..+. +|+|+++||++...
T Consensus 218 I~~~~---vk~GavVIDvgi~~ 236 (285)
T 3l07_A 218 ITADM---VKEGAVVIDVGINH 236 (285)
T ss_dssp BCGGG---SCTTCEEEECCCEE
T ss_pred CCHHH---cCCCcEEEEecccC
Confidence 66654 59999999999665
No 150
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.39 E-value=6.5e-07 Score=81.08 Aligned_cols=81 Identities=21% Similarity=0.361 Sum_probs=68.4
Q ss_pred ccccCCCEEEEEeeCh-hhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhcc
Q 021995 112 AYDLEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGM 190 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~-IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~ 190 (304)
+.++.|+++.|||.|. +|+.+|..|...|++|++++++. .++++.+++||+|+.+++. .++
T Consensus 155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t--------------~~L~~~~~~ADIVI~Avg~----p~~ 216 (285)
T 3p2o_A 155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT--------------KDLSLYTRQADLIIVAAGC----VNL 216 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SCHHHHHTTCSEEEECSSC----TTC
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHHhhcCCEEEECCCC----CCc
Confidence 4578999999999988 69999999999999999998632 3788999999999999983 346
Q ss_pred ccHHHHhcCCCCCEEEEcCCCch
Q 021995 191 FDKDRIAKMKKGVLIVNNARGAI 213 (304)
Q Consensus 191 i~~~~l~~mk~g~ilVn~~rg~~ 213 (304)
+..+. +|+|+++||++.-.+
T Consensus 217 I~~~~---vk~GavVIDVgi~~~ 236 (285)
T 3p2o_A 217 LRSDM---VKEGVIVVDVGINRL 236 (285)
T ss_dssp BCGGG---SCTTEEEEECCCEEC
T ss_pred CCHHH---cCCCeEEEEeccCcc
Confidence 66654 599999999997664
No 151
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=98.39 E-value=1e-06 Score=79.68 Aligned_cols=114 Identities=21% Similarity=0.284 Sum_probs=84.3
Q ss_pred ccccCCCEEEEEeeChh-hHHHHHHhccC--CCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhh
Q 021995 112 AYDLEGKTVGTVGCGRI-GKLLLQRLKPF--NCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTR 188 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~I-G~~lA~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~ 188 (304)
+.++.|+++.|||.|.+ |+.+|+.|... |++|++++++. .++.+.+++||+|+.+++..
T Consensus 153 ~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t--------------~~L~~~~~~ADIVI~Avg~p---- 214 (281)
T 2c2x_A 153 DISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT--------------RDLPALTRQADIVVAAVGVA---- 214 (281)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC--------------SCHHHHHTTCSEEEECSCCT----
T ss_pred CCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch--------------hHHHHHHhhCCEEEECCCCC----
Confidence 45799999999999985 99999999999 89999997643 47899999999999999832
Q ss_pred ccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEEccCCCcCCHHHHH
Q 021995 189 GMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQL 268 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~lTPHia~~t~e~~~ 268 (304)
+++..+. +|+|+++||+|...+-| | ..=||- .+- .+ .--.+||=-+|--.-+..
T Consensus 215 ~~I~~~~---vk~GavVIDVgi~r~~~----------g----lvGDVd-~~v-------~~-~a~~iTPVPGGVGpmT~a 268 (281)
T 2c2x_A 215 HLLTADM---VRPGAAVIDVGVSRTDD----------G----LVGDVH-PDV-------WE-LAGHVSPNPGGVGPLTRA 268 (281)
T ss_dssp TCBCGGG---SCTTCEEEECCEEEETT----------E----EEESBC-GGG-------GG-TCSEEECSSSSSHHHHHH
T ss_pred cccCHHH---cCCCcEEEEccCCCCCC----------C----ccCccc-cch-------hh-heeeecCCCCCccHHHHH
Confidence 4576665 58999999999766432 2 445775 221 11 224578877776544443
Q ss_pred H
Q 021995 269 R 269 (304)
Q Consensus 269 ~ 269 (304)
.
T Consensus 269 ~ 269 (281)
T 2c2x_A 269 F 269 (281)
T ss_dssp H
T ss_pred H
Confidence 3
No 152
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.38 E-value=5.5e-07 Score=81.66 Aligned_cols=127 Identities=17% Similarity=0.264 Sum_probs=89.6
Q ss_pred ccccCCCEEEEEeeCh-hhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhcc
Q 021995 112 AYDLEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGM 190 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~-IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~ 190 (304)
+.++.|+++.|||.|. +|+.+|+.|...|++|+++++.. .++.+.+++||+|+.+++.. ++
T Consensus 154 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------~~L~~~~~~ADIVI~Avg~p----~l 215 (288)
T 1b0a_A 154 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT--------------KNLRHHVENADLLIVAVGKP----GF 215 (288)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC--------------SCHHHHHHHCSEEEECSCCT----TC
T ss_pred CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHHhccCCEEEECCCCc----Cc
Confidence 4579999999999997 59999999999999999997532 47889999999999999832 46
Q ss_pred ccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEEccCCCcCCHHHHHHH
Q 021995 191 FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRY 270 (304)
Q Consensus 191 i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~lTPHia~~t~e~~~~~ 270 (304)
+..+. +|+|+++||+|...+-| |++ .-||-..+- .+ .--.+||=-+|--.-+...+
T Consensus 216 I~~~~---vk~GavVIDVgi~r~~~----------g~l---~GDVdf~~v-------~~-~a~~iTPVPGGVGpmT~a~L 271 (288)
T 1b0a_A 216 IPGDW---IKEGAIVIDVGINRLEN----------GKV---VGDVVFEDA-------AK-RASYITPVPGGVGPMTVATL 271 (288)
T ss_dssp BCTTT---SCTTCEEEECCCEECTT----------SCE---ECSBCHHHH-------HH-HCSEECCSSSSSHHHHHHHH
T ss_pred CCHHH---cCCCcEEEEccCCccCC----------CCc---cCCcCHHHH-------hh-hccEecCCCCCccHHHHHHH
Confidence 66655 59999999999766432 433 346532110 00 12458887777655555554
Q ss_pred HHHHHHHHHH
Q 021995 271 AAGVKDMLDR 280 (304)
Q Consensus 271 ~~~~~~~l~~ 280 (304)
...+++..++
T Consensus 272 l~Ntv~aa~~ 281 (288)
T 1b0a_A 272 IENTLQACVE 281 (288)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 153
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=98.36 E-value=6.4e-07 Score=80.75 Aligned_cols=77 Identities=19% Similarity=0.270 Sum_probs=66.1
Q ss_pred cCCCEEEEEeeCh-hhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccH
Q 021995 115 LEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 193 (304)
Q Consensus 115 L~g~~vgIIG~G~-IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~ 193 (304)
+.|+++.|||.|. +|+.+|+.|...|++|+++++.. .++++.+++||+|+.+++. .+++..
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t--------------~~L~~~~~~ADIVI~Avg~----p~~I~~ 209 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT--------------KDIGSMTRSSKIVVVAVGR----PGFLNR 209 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SCHHHHHHHSSEEEECSSC----TTCBCG
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc--------------ccHHHhhccCCEEEECCCC----CccccH
Confidence 8999999999986 89999999999999999998631 4788999999999999984 246666
Q ss_pred HHHhcCCCCCEEEEcCCCc
Q 021995 194 DRIAKMKKGVLIVNNARGA 212 (304)
Q Consensus 194 ~~l~~mk~g~ilVn~~rg~ 212 (304)
+. +|+|+++||++...
T Consensus 210 ~~---vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 210 EM---VTPGSVVIDVGINY 225 (276)
T ss_dssp GG---CCTTCEEEECCCEE
T ss_pred hh---ccCCcEEEEeccCc
Confidence 54 59999999999765
No 154
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.34 E-value=8.7e-07 Score=80.25 Aligned_cols=81 Identities=22% Similarity=0.388 Sum_probs=67.8
Q ss_pred ccccCCCEEEEEeeCh-hhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhcc
Q 021995 112 AYDLEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGM 190 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~-IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~ 190 (304)
+.++.|+++.|||.|. +|+.+|..|...|++|+++++.. .++++.+++||+|+.+++. .++
T Consensus 156 ~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T--------------~~L~~~~~~ADIVI~Avg~----p~~ 217 (286)
T 4a5o_A 156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT--------------RDLADHVSRADLVVVAAGK----PGL 217 (286)
T ss_dssp TCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC--------------SCHHHHHHTCSEEEECCCC----TTC
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC--------------cCHHHHhccCCEEEECCCC----CCC
Confidence 4578999999999987 79999999999999999987632 3788999999999999983 346
Q ss_pred ccHHHHhcCCCCCEEEEcCCCch
Q 021995 191 FDKDRIAKMKKGVLIVNNARGAI 213 (304)
Q Consensus 191 i~~~~l~~mk~g~ilVn~~rg~~ 213 (304)
+..+. +|+|+++||++.-.+
T Consensus 218 I~~~~---vk~GavVIDvgi~~~ 237 (286)
T 4a5o_A 218 VKGEW---IKEGAIVIDVGINRQ 237 (286)
T ss_dssp BCGGG---SCTTCEEEECCSCSS
T ss_pred CCHHH---cCCCeEEEEeccccc
Confidence 66654 599999999996653
No 155
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=98.34 E-value=5.5e-07 Score=83.43 Aligned_cols=91 Identities=20% Similarity=0.193 Sum_probs=67.5
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCce-------------ecCCHHhhcCcCCEEEEcCCC
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAK-------------FEEDLDTMLPKCDIVVVNTPL 183 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-------------~~~~l~ell~~aDvVi~~~p~ 183 (304)
.++|+|||.|.||..+|..|...|++|.+++|. ...+...+.|.. ...++++ +..+|+|++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~ 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA 80 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc
Confidence 368999999999999999999999999999984 233333444432 2346666 5899999999995
Q ss_pred ChhhhccccHHHHhcCCCCCEEEEcCCC
Q 021995 184 TEKTRGMFDKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~mk~g~ilVn~~rg 211 (304)
..+..++ ++..+.+++++++|.+..|
T Consensus 81 -~~~~~~~-~~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 81 -PALESVA-AGIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp -HHHHHHH-GGGSSSCCTTCEEEECCSS
T ss_pred -hhHHHHH-HHHHhhCCCCCEEEEECCC
Confidence 3444333 2344556789999999988
No 156
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=98.32 E-value=2.2e-07 Score=84.60 Aligned_cols=105 Identities=11% Similarity=0.065 Sum_probs=72.3
Q ss_pred CEEEEEeeChhhHHHHHHhccC-----C-CeEEEEcCCCCChhHHHh-cCceecC-------------CHHhhcCcCCEE
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF-----N-CNLLYHDRVKMDPQLEKE-TGAKFEE-------------DLDTMLPKCDIV 177 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~-----G-~~V~~~dr~~~~~~~~~~-~g~~~~~-------------~l~ell~~aDvV 177 (304)
++|+|||+|.||..+|..|... | ++|++|+| +...+...+ .|..... +..+.+..+|+|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 87 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYI 87 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEE
Confidence 4899999999999999999887 8 99999998 433444444 4543221 223457899999
Q ss_pred EEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcC
Q 021995 178 VVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 226 (304)
Q Consensus 178 i~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g 226 (304)
++++|... +..++ ++..+.++++.++|++..|- -..+.+.+.+...
T Consensus 88 il~vk~~~-~~~v~-~~i~~~l~~~~~iv~~~nG~-~~~~~l~~~l~~~ 133 (317)
T 2qyt_A 88 LFCTKDYD-MERGV-AEIRPMIGQNTKILPLLNGA-DIAERMRTYLPDT 133 (317)
T ss_dssp EECCSSSC-HHHHH-HHHGGGEEEEEEEEECSCSS-SHHHHHTTTSCTT
T ss_pred EEecCccc-HHHHH-HHHHhhcCCCCEEEEccCCC-CcHHHHHHHCCCC
Confidence 99999654 33333 34555677889999987762 2224455555443
No 157
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=98.32 E-value=3.1e-06 Score=77.81 Aligned_cols=107 Identities=16% Similarity=0.086 Sum_probs=76.9
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCc---------------eecCCHHhhcCcCCEEEEcCC
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA---------------KFEEDLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~---------------~~~~~l~ell~~aDvVi~~~p 182 (304)
++|+|||.|.||..+|..|...|++|.+++|+. .+..++.|. ....+++++.+.+|+|++++|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK 80 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIK 80 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecC
Confidence 589999999999999999998899999999965 233333332 123466677668999999999
Q ss_pred CChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 183 LTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 183 ~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
... +...+ ++....++++.++|.+..| +-.++.+.+.+...++.
T Consensus 81 ~~~-~~~~l-~~l~~~l~~~t~Iv~~~nG-i~~~~~l~~~~~~~~vl 124 (320)
T 3i83_A 81 VVE-GADRV-GLLRDAVAPDTGIVLISNG-IDIEPEVAAAFPDNEVI 124 (320)
T ss_dssp CCT-TCCHH-HHHTTSCCTTCEEEEECSS-SSCSHHHHHHSTTSCEE
T ss_pred CCC-hHHHH-HHHHhhcCCCCEEEEeCCC-CChHHHHHHHCCCCcEE
Confidence 654 23332 4555667889999988876 22346677777655544
No 158
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.31 E-value=8.3e-07 Score=80.97 Aligned_cols=133 Identities=17% Similarity=0.202 Sum_probs=89.3
Q ss_pred ccccCCCEEEEEeeCh-hhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHH--hhcCcCCEEEEcCCCChhhh
Q 021995 112 AYDLEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLD--TMLPKCDIVVVNTPLTEKTR 188 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~-IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~--ell~~aDvVi~~~p~~~~t~ 188 (304)
+.++.|+++.|||.|. +|+.+|..|...|++|+++++.. .+++ +.+++||+|+.+++. .
T Consensus 160 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T--------------~~l~l~~~~~~ADIVI~Avg~----p 221 (300)
T 4a26_A 160 GIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT--------------STEDMIDYLRTADIVIAAMGQ----P 221 (300)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS--------------CHHHHHHHHHTCSEEEECSCC----T
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC--------------CCchhhhhhccCCEEEECCCC----C
Confidence 3578999999999988 79999999999999999998732 1455 889999999999984 2
Q ss_pred ccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecCCCCCCCCCCCccCCCCeEEccCCCcCCHHHHH
Q 021995 189 GMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQL 268 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~~~ep~~~~~~l~~~~nv~lTPHia~~t~e~~~ 268 (304)
+++..+. +|+|+++||++...+-|... ++|. ...=||...+- .-.--.+||=-+|--.-+..
T Consensus 222 ~~I~~~~---vk~GavVIDvgi~~~~~~~~-----~~g~--kl~GDVdf~~v--------~~~a~~iTPVPGGVGpmT~a 283 (300)
T 4a26_A 222 GYVKGEW---IKEGAAVVDVGTTPVPDPSR-----KDGY--RLVGDVCFEEA--------AARAAWISPVPGGVGPMTIA 283 (300)
T ss_dssp TCBCGGG---SCTTCEEEECCCEEESCSCS-----TTSC--EEECSBCHHHH--------TTTCSEEECTTTSSSHHHHH
T ss_pred CCCcHHh---cCCCcEEEEEeccCCcCCcc-----cCCc--eeecCccHHHH--------HhhceEeCCCCCcChHHHHH
Confidence 4666654 59999999999665432110 0110 12335542211 01125689977777665555
Q ss_pred HHHHHHHHHHHH
Q 021995 269 RYAAGVKDMLDR 280 (304)
Q Consensus 269 ~~~~~~~~~l~~ 280 (304)
.+...+++..++
T Consensus 284 ~Ll~Ntv~aa~~ 295 (300)
T 4a26_A 284 MLLENTLEAFKA 295 (300)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 554444444433
No 159
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.31 E-value=1.3e-06 Score=81.80 Aligned_cols=92 Identities=9% Similarity=0.125 Sum_probs=68.7
Q ss_pred CCCEEEEEeeChhhHHHHHHhc-cCC-CeEEEEcCCCCChhHHH-hc----C--ceecCCHHhhcCcCCEEEEcCCCChh
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLK-PFN-CNLLYHDRVKMDPQLEK-ET----G--AKFEEDLDTMLPKCDIVVVNTPLTEK 186 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~-~~G-~~V~~~dr~~~~~~~~~-~~----g--~~~~~~l~ell~~aDvVi~~~p~~~~ 186 (304)
..++++|||.|.+|+.+++.+. ..+ .+|.+|||++.+.+.+. ++ | +..+++++++++++|+|++|+|...
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~- 206 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKA- 206 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSS-
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCC-
Confidence 5679999999999999998764 334 57999999865444333 22 4 3456789999999999999999752
Q ss_pred hhccccHHHHhcCCCCCEEEEcCCC
Q 021995 187 TRGMFDKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 187 t~~~i~~~~l~~mk~g~ilVn~~rg 211 (304)
...++.. +.+++|..+++++..
T Consensus 207 ~~pvl~~---~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 207 YATIITP---DMLEPGMHLNAVGGD 228 (350)
T ss_dssp EEEEECG---GGCCTTCEEEECSCC
T ss_pred CCceecH---HHcCCCCEEEECCCC
Confidence 2334443 467999999999863
No 160
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=98.30 E-value=3.4e-07 Score=84.48 Aligned_cols=94 Identities=18% Similarity=0.173 Sum_probs=68.5
Q ss_pred ccccCCCEEEEEeeChh-hHHHHHHhccCCCeEEEEcCCCCC-hhHHHhcCc--e-e-----c--CCHHhhcCcCCEEEE
Q 021995 112 AYDLEGKTVGTVGCGRI-GKLLLQRLKPFNCNLLYHDRVKMD-PQLEKETGA--K-F-----E--EDLDTMLPKCDIVVV 179 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~I-G~~lA~~l~~~G~~V~~~dr~~~~-~~~~~~~g~--~-~-----~--~~l~ell~~aDvVi~ 179 (304)
+.++.|+++.|||.|.| |+.+|+.|...|++|+++||+... .+.+..++. . . . .++++.+++||+|+.
T Consensus 172 g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIs 251 (320)
T 1edz_A 172 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT 251 (320)
T ss_dssp TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEE
Confidence 44799999999999975 999999999999999999986210 000111111 1 1 1 478899999999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCCEEEEcCCC
Q 021995 180 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 180 ~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg 211 (304)
+++.. .-+|..+. +|+|+++||+|..
T Consensus 252 Atg~p---~~vI~~e~---vk~GavVIDVgi~ 277 (320)
T 1edz_A 252 GVPSE---NYKFPTEY---IKEGAVCINFACT 277 (320)
T ss_dssp CCCCT---TCCBCTTT---SCTTEEEEECSSS
T ss_pred CCCCC---cceeCHHH---cCCCeEEEEcCCC
Confidence 99742 12366555 5899999999854
No 161
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.30 E-value=1.1e-06 Score=67.79 Aligned_cols=88 Identities=18% Similarity=0.189 Sum_probs=61.4
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCC-CeEEEEcCCCCChhHHHhcCceec-------CCHHhhcCcCCEEEEcCCCChhh
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFN-CNLLYHDRVKMDPQLEKETGAKFE-------EDLDTMLPKCDIVVVNTPLTEKT 187 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G-~~V~~~dr~~~~~~~~~~~g~~~~-------~~l~ell~~aDvVi~~~p~~~~t 187 (304)
.+++|+|+|.|.||+.+++.|...| ++|++++|++...+.....++... +++.++++++|+|+.++|....
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~- 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT- 82 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH-
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh-
Confidence 4579999999999999999999999 899999997644443333343211 2455778899999999974321
Q ss_pred hccccHHHH-hcCCCCCEEEEcC
Q 021995 188 RGMFDKDRI-AKMKKGVLIVNNA 209 (304)
Q Consensus 188 ~~~i~~~~l-~~mk~g~ilVn~~ 209 (304)
.... ...+.|...++.+
T Consensus 83 -----~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 83 -----PIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp -----HHHHHHHHHTTCEEECCC
T ss_pred -----HHHHHHHHHhCCCEEEec
Confidence 1222 2235677777775
No 162
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=98.29 E-value=1.2e-06 Score=80.74 Aligned_cols=105 Identities=16% Similarity=0.179 Sum_probs=72.2
Q ss_pred cCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCc-------------eecCCHHhhcCcCCEEEEcC
Q 021995 115 LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA-------------KFEEDLDTMLPKCDIVVVNT 181 (304)
Q Consensus 115 L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~-------------~~~~~l~ell~~aDvVi~~~ 181 (304)
...++|+|||.|.||..+|..|...|++|.+| +++...+...+.|. ....++++ +..+|+|++++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vilav 94 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFCV 94 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEECC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEEc
Confidence 45679999999999999999999999999999 65433343444332 22345544 58999999999
Q ss_pred CCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHH
Q 021995 182 PLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACS 224 (304)
Q Consensus 182 p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~ 224 (304)
|.. .+..++ ++..+.+++++++|.+..|=-. ++.+.+.+.
T Consensus 95 k~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi~~-~~~l~~~~~ 134 (318)
T 3hwr_A 95 KST-DTQSAA-LAMKPALAKSALVLSLQNGVEN-ADTLRSLLE 134 (318)
T ss_dssp CGG-GHHHHH-HHHTTTSCTTCEEEEECSSSSH-HHHHHHHCC
T ss_pred ccc-cHHHHH-HHHHHhcCCCCEEEEeCCCCCc-HHHHHHHcC
Confidence 965 444443 4455667889999999877322 245555554
No 163
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.26 E-value=7.3e-07 Score=72.03 Aligned_cols=90 Identities=17% Similarity=0.230 Sum_probs=63.8
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec----CC---HHh-hcCcCCEEEEcCCCChhhhc
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----ED---LDT-MLPKCDIVVVNTPLTEKTRG 189 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~----~~---l~e-ll~~aDvVi~~~p~~~~t~~ 189 (304)
.+|.|+|+|.+|+.+++.|...|++|+++|+++...+...+.|+... .+ +++ -+.++|+|++++|....+..
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~~ 87 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGE 87 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHHH
Confidence 47999999999999999999999999999998755555555665422 12 222 25689999999997655543
Q ss_pred cccHHHHhcCCCCCEEEEcC
Q 021995 190 MFDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 190 ~i~~~~l~~mk~g~ilVn~~ 209 (304)
+ ...++.+.++..+|-..
T Consensus 88 ~--~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 88 I--VASARAKNPDIEIIARA 105 (140)
T ss_dssp H--HHHHHHHCSSSEEEEEE
T ss_pred H--HHHHHHHCCCCeEEEEE
Confidence 3 23455565666666443
No 164
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.21 E-value=4.5e-06 Score=76.88 Aligned_cols=89 Identities=21% Similarity=0.371 Sum_probs=68.5
Q ss_pred CCCEEEEEeeChhhHHHHHHhcc-CC-CeEEEEcCCCCChhHHHh----cCc--eecCCHHhhcCcCCEEEEcCCCChhh
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKP-FN-CNLLYHDRVKMDPQLEKE----TGA--KFEEDLDTMLPKCDIVVVNTPLTEKT 187 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~-~G-~~V~~~dr~~~~~~~~~~----~g~--~~~~~l~ell~~aDvVi~~~p~~~~t 187 (304)
..++++|||.|.+|+.+++.|.. ++ .+|.+|||+ .....+.+ .|+ ... ++++++++||+|++|+|...
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~-~~~eav~~aDIVi~aT~s~~-- 195 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMA-APADIAAQADIVVTATRSTT-- 195 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEEC-CHHHHHHHCSEEEECCCCSS--
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEe-CHHHHHhhCCEEEEccCCCC--
Confidence 46799999999999999998875 34 469999998 54444443 354 345 89999999999999998652
Q ss_pred hccccHHHHhcCCCCCEEEEcCCCc
Q 021995 188 RGMFDKDRIAKMKKGVLIVNNARGA 212 (304)
Q Consensus 188 ~~~i~~~~l~~mk~g~ilVn~~rg~ 212 (304)
.++.. +.+++|+.++++|...
T Consensus 196 -pvl~~---~~l~~G~~V~~vGs~~ 216 (313)
T 3hdj_A 196 -PLFAG---QALRAGAFVGAIGSSL 216 (313)
T ss_dssp -CSSCG---GGCCTTCEEEECCCSS
T ss_pred -cccCH---HHcCCCcEEEECCCCC
Confidence 45543 4589999999998643
No 165
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.20 E-value=4.3e-06 Score=66.32 Aligned_cols=90 Identities=18% Similarity=0.106 Sum_probs=60.0
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHH-hcCceec----CCHHh----hcCcCCEEEEcCCCChhh
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-ETGAKFE----EDLDT----MLPKCDIVVVNTPLTEKT 187 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~----~~l~e----ll~~aDvVi~~~p~~~~t 187 (304)
+++|+|+|+|.+|+.+++.|...|++|+++|+++...+... ..+.... .+.+. .+.++|+|++++|.....
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 57899999999999999999999999999998654333333 2354321 12222 267899999999864332
Q ss_pred hccccHHHHhcCCCCCEEEEc
Q 021995 188 RGMFDKDRIAKMKKGVLIVNN 208 (304)
Q Consensus 188 ~~~i~~~~l~~mk~g~ilVn~ 208 (304)
. .-....+.++++.+++-+
T Consensus 84 ~--~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 84 L--MSSLLAKSYGINKTIARI 102 (140)
T ss_dssp H--HHHHHHHHTTCCCEEEEC
T ss_pred H--HHHHHHHHcCCCEEEEEe
Confidence 2 223455567777666543
No 166
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=98.17 E-value=6e-06 Score=75.57 Aligned_cols=107 Identities=16% Similarity=0.141 Sum_probs=75.3
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCce--------------ecCCHHhhcCcCCEEEEcCCC
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAK--------------FEEDLDTMLPKCDIVVVNTPL 183 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~--------------~~~~l~ell~~aDvVi~~~p~ 183 (304)
++|+|||.|.||..+|..|...|.+|.+++|+. .+..++.|.. ...+.++ +..+|+|++++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vilavk~ 79 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVGLKT 79 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEECCCG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEecCC
Confidence 579999999999999999998899999999965 3444444431 1235544 6789999999995
Q ss_pred ChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceE
Q 021995 184 TEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAG 230 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~g 230 (304)
.. +...+ ++.-+.+++++++|.+.-|= -.++.|.+.+...++.+
T Consensus 80 ~~-~~~~l-~~l~~~l~~~~~iv~l~nGi-~~~~~l~~~~~~~~v~~ 123 (312)
T 3hn2_A 80 FA-NSRYE-ELIRPLVEEGTQILTLQNGL-GNEEALATLFGAERIIG 123 (312)
T ss_dssp GG-GGGHH-HHHGGGCCTTCEEEECCSSS-SHHHHHHHHTCGGGEEE
T ss_pred CC-cHHHH-HHHHhhcCCCCEEEEecCCC-CcHHHHHHHCCCCcEEE
Confidence 43 33332 45556678899999998772 22456666676555543
No 167
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.15 E-value=1.6e-06 Score=69.18 Aligned_cols=96 Identities=13% Similarity=0.152 Sum_probs=60.5
Q ss_pred cCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec----CCH---Hhh-cCcCCEEEEcCCCChh
Q 021995 115 LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----EDL---DTM-LPKCDIVVVNTPLTEK 186 (304)
Q Consensus 115 L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~----~~l---~el-l~~aDvVi~~~p~~~~ 186 (304)
+.+++|+|+|+|.+|+.+++.|...|++|+++|+++...+...+.+.... .+. +++ +.++|+|+.+++...+
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ 83 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence 56788999999999999999999999999999986533222223333211 122 233 5689999999986522
Q ss_pred hhccccHHHHhcCCCCCEEEEcCCCc
Q 021995 187 TRGMFDKDRIAKMKKGVLIVNNARGA 212 (304)
Q Consensus 187 t~~~i~~~~l~~mk~g~ilVn~~rg~ 212 (304)
.. ..-......+.+. .+|....+.
T Consensus 84 ~~-~~~~~~~~~~~~~-~ii~~~~~~ 107 (144)
T 2hmt_A 84 AS-TLTTLLLKELDIP-NIWVKAQNY 107 (144)
T ss_dssp HH-HHHHHHHHHTTCS-EEEEECCSH
T ss_pred HH-HHHHHHHHHcCCC-eEEEEeCCH
Confidence 21 1123444556665 555555444
No 168
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=98.14 E-value=2.8e-06 Score=76.49 Aligned_cols=97 Identities=15% Similarity=0.112 Sum_probs=61.7
Q ss_pred cccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhH-HHhcC----ceecCCHHhhcC-cCCEEEEcCCCChh
Q 021995 113 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQL-EKETG----AKFEEDLDTMLP-KCDIVVVNTPLTEK 186 (304)
Q Consensus 113 ~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~-~~~~g----~~~~~~l~ell~-~aDvVi~~~p~~~~ 186 (304)
..+.+++++|+|.|.+|+.++..|...|.+|++++|+..+.+. +...+ +.. .+++++.+ ++|+|+.++|....
T Consensus 115 ~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~~~~~~~~DivIn~t~~~~~ 193 (272)
T 1p77_A 115 WLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQA-VSMDSIPLQTYDLVINATSAGLS 193 (272)
T ss_dssp CCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEE-EEGGGCCCSCCSEEEECCCC---
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEE-eeHHHhccCCCCEEEECCCCCCC
Confidence 3578999999999999999999999999999999997543322 22222 112 24445444 89999999996532
Q ss_pred hhc-cccHHHHhcCCCCCEEEEcCCCch
Q 021995 187 TRG-MFDKDRIAKMKKGVLIVNNARGAI 213 (304)
Q Consensus 187 t~~-~i~~~~l~~mk~g~ilVn~~rg~~ 213 (304)
... -++.+. ++++.+++|+.-.+.
T Consensus 194 ~~~~~i~~~~---l~~~~~v~D~~y~p~ 218 (272)
T 1p77_A 194 GGTASVDAEI---LKLGSAFYDMQYAKG 218 (272)
T ss_dssp ----CCCHHH---HHHCSCEEESCCCTT
T ss_pred CCCCCCCHHH---cCCCCEEEEeeCCCC
Confidence 100 122222 245566666655443
No 169
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=98.14 E-value=2.1e-05 Score=74.11 Aligned_cols=137 Identities=20% Similarity=0.198 Sum_probs=95.8
Q ss_pred CCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCC
Q 021995 61 AGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFN 140 (304)
Q Consensus 61 ~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G 140 (304)
-.|.+.|. . -.-+|--+++.+++..|- .+..+.+.+|.|+|.|.+|..+|+.|...|
T Consensus 159 ~~Ipvf~D-D--iqGTasV~lAal~~A~~i--------------------~g~~l~~~kVVv~GAGaAG~~iAkll~~~G 215 (388)
T 1vl6_A 159 MNIPVFHD-D--QQGTAVVVSAAFLNALKL--------------------TEKKIEEVKVVVNGIGAAGYNIVKFLLDLG 215 (388)
T ss_dssp CSSCEEEH-H--HHHHHHHHHHHHHHHHHH--------------------HTCCTTTCEEEEECCSHHHHHHHHHHHHHT
T ss_pred cCcceecc-c--cccHHHHHHHHHHHHHHH--------------------hCCCCCCcEEEEECCCHHHHHHHHHHHhCC
Confidence 46888883 1 233344455555555551 133689999999999999999999999999
Q ss_pred C-eEEEEcCC----CCCh---------hHHHhcC-ceecCCHHhhcCcCCEEEEcCCCChhhhccccHHHHhcCCCCCEE
Q 021995 141 C-NLLYHDRV----KMDP---------QLEKETG-AKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLI 205 (304)
Q Consensus 141 ~-~V~~~dr~----~~~~---------~~~~~~g-~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~il 205 (304)
. +|+++|++ .... ..+.+.. .....+|+|.++++|+++-+.. .+++.++.++.|++++++
T Consensus 216 ~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADVlIG~Sa-----p~l~t~emVk~Ma~~pII 290 (388)
T 1vl6_A 216 VKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADFFIGVSR-----GNILKPEWIKKMSRKPVI 290 (388)
T ss_dssp CCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSEEEECSC-----SSCSCHHHHTTSCSSCEE
T ss_pred CCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCEEEEeCC-----CCccCHHHHHhcCCCCEE
Confidence 9 79999997 3221 1222221 1124579999999999987742 279999999999999999
Q ss_pred EEcCCCchhchHHHHHHHHcCC
Q 021995 206 VNNARGAIMDTQAVVDACSSGH 227 (304)
Q Consensus 206 Vn~~rg~~vd~~aL~~aL~~g~ 227 (304)
+.+++... |-.=.++.+.|.
T Consensus 291 falSNPt~--E~~p~~a~~~g~ 310 (388)
T 1vl6_A 291 FALANPVP--EIDPELAREAGA 310 (388)
T ss_dssp EECCSSSC--SSCHHHHHHTTC
T ss_pred EEcCCCCC--CCCHHHHHHhcC
Confidence 99998763 322233344454
No 170
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=98.12 E-value=2.4e-06 Score=77.61 Aligned_cols=96 Identities=14% Similarity=0.177 Sum_probs=65.5
Q ss_pred ccccCCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhH-HHhcC----ceecCCHHhhcCcCCEEEEcCCCCh
Q 021995 112 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQL-EKETG----AKFEEDLDTMLPKCDIVVVNTPLTE 185 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~-~~~~g----~~~~~~l~ell~~aDvVi~~~p~~~ 185 (304)
+.++.|+++.|+|.|.+|+.++..|...|+ +|++++|+..+.+. +++.+ +.. .+++++..++|+|+.++|...
T Consensus 121 ~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~-~~~~~l~~~aDiIInaTp~gm 199 (281)
T 3o8q_A 121 QVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKA-QAFEQLKQSYDVIINSTSASL 199 (281)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEE-EEGGGCCSCEEEEEECSCCCC
T ss_pred CCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeE-eeHHHhcCCCCEEEEcCcCCC
Confidence 346889999999999999999999999996 89999997643322 22222 222 256666689999999999753
Q ss_pred hhh-ccccHHHHhcCCCCCEEEEcCCC
Q 021995 186 KTR-GMFDKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 186 ~t~-~~i~~~~l~~mk~g~ilVn~~rg 211 (304)
... ..+.. ..++++.+++|+.-.
T Consensus 200 ~~~~~~l~~---~~l~~~~~V~DlvY~ 223 (281)
T 3o8q_A 200 DGELPAIDP---VIFSSRSVCYDMMYG 223 (281)
T ss_dssp ----CSCCG---GGEEEEEEEEESCCC
T ss_pred CCCCCCCCH---HHhCcCCEEEEecCC
Confidence 221 12222 235666677776543
No 171
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.10 E-value=2.4e-06 Score=80.31 Aligned_cols=109 Identities=17% Similarity=0.127 Sum_probs=74.3
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCc-e-----ecCCHHhhcCcCCEEEEcCCCChhh
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA-K-----FEEDLDTMLPKCDIVVVNTPLTEKT 187 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~-~-----~~~~l~ell~~aDvVi~~~p~~~~t 187 (304)
+=++++|+|||+|.||+.+++.|... .+|.++||+..+.+...+... . ..++++++++++|+|+.|+|.....
T Consensus 13 ~~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~~ 91 (365)
T 2z2v_A 13 EGRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGF 91 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHHHH
T ss_pred cCCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhhhH
Confidence 34678999999999999999999887 899999997644333322211 1 1245778999999999999854221
Q ss_pred hccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 188 RGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 188 ~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
.-..+.++.|..+++++-- .-+..+|.+..++..+.
T Consensus 92 -----~v~~a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~~ 127 (365)
T 2z2v_A 92 -----KSIKAAIKSKVDMVDVSFM-PENPLELRDEAEKAQVT 127 (365)
T ss_dssp -----HHHHHHHHTTCCEEECCCC-SSCGGGGHHHHHHTTCE
T ss_pred -----HHHHHHHHhCCeEEEccCC-cHHHHHHHHHHHHcCCE
Confidence 1123446788999998853 33445677766666655
No 172
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.10 E-value=6.8e-06 Score=75.88 Aligned_cols=87 Identities=18% Similarity=0.297 Sum_probs=65.4
Q ss_pred CCCEEEEEeeChhhHHHHHHhcc-CC-CeEEEEcCCCCChhHHH-hc-----CceecCCHHhhcCcCCEEEEcCCCChhh
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKP-FN-CNLLYHDRVKMDPQLEK-ET-----GAKFEEDLDTMLPKCDIVVVNTPLTEKT 187 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~-~G-~~V~~~dr~~~~~~~~~-~~-----g~~~~~~l~ell~~aDvVi~~~p~~~~t 187 (304)
..++++|||.|.+|+.+++.|.. .+ .+|.+|||++.+.+.+. ++ .+. ++++++++ ++|+|++|+|...
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v-~aDvVi~aTp~~~-- 199 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPAEEAS-RCDVLVTTTPSRK-- 199 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT-SSSEEEECCCCSS--
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCHHHHh-CCCEEEEeeCCCC--
Confidence 46799999999999999998875 33 56999999865443332 22 234 67899999 9999999999643
Q ss_pred hccccHHHHhcCCCCCEEEEcCC
Q 021995 188 RGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 188 ~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
.++.. ..+++|..+++++.
T Consensus 200 -pv~~~---~~l~~G~~V~~ig~ 218 (322)
T 1omo_A 200 -PVVKA---EWVEEGTHINAIGA 218 (322)
T ss_dssp -CCBCG---GGCCTTCEEEECSC
T ss_pred -ceecH---HHcCCCeEEEECCC
Confidence 34432 46789999999963
No 173
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.10 E-value=5.7e-06 Score=66.39 Aligned_cols=89 Identities=17% Similarity=0.128 Sum_probs=58.9
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec----CCH---Hhh-cCcCCEEEEcCCCChhh
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----EDL---DTM-LPKCDIVVVNTPLTEKT 187 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~----~~l---~el-l~~aDvVi~~~p~~~~t 187 (304)
.++++.|+|+|.+|+.+++.|...|++|+++|+++...+...+.+.... .+. +++ +.++|+|++++|..+.
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~- 83 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEF- 83 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHH-
Confidence 4578999999999999999999999999999997654444445554321 122 222 4689999999984333
Q ss_pred hccccHHHHhcCCCCCEEE
Q 021995 188 RGMFDKDRIAKMKKGVLIV 206 (304)
Q Consensus 188 ~~~i~~~~l~~mk~g~ilV 206 (304)
++.-....+.+....+++
T Consensus 84 -n~~~~~~a~~~~~~~iia 101 (141)
T 3llv_A 84 -NLKILKALRSVSDVYAIV 101 (141)
T ss_dssp -HHHHHHHHHHHCCCCEEE
T ss_pred -HHHHHHHHHHhCCceEEE
Confidence 232234444455334444
No 174
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=98.07 E-value=1.4e-05 Score=71.83 Aligned_cols=95 Identities=14% Similarity=0.176 Sum_probs=64.8
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChh-HHHhcCc---eecCCHHhhc-CcCCEEEEcCCCChhhh
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQ-LEKETGA---KFEEDLDTML-PKCDIVVVNTPLTEKTR 188 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~-~~~~~g~---~~~~~l~ell-~~aDvVi~~~p~~~~t~ 188 (304)
.+.|+++.|+|.|.+|+.+++.|...|.+|++++|+..+.+ .++..+. ....+++++. .++|+|+.++|.....
T Consensus 116 ~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~~- 194 (271)
T 1nyt_A 116 IRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISG- 194 (271)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGGT-
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCCC-
Confidence 57899999999999999999999999999999999754332 2222221 1112344443 5899999999865431
Q ss_pred cc--ccHHHHhcCCCCCEEEEcCCCc
Q 021995 189 GM--FDKDRIAKMKKGVLIVNNARGA 212 (304)
Q Consensus 189 ~~--i~~~~l~~mk~g~ilVn~~rg~ 212 (304)
.+ +..+ .++++.+++|+.-.+
T Consensus 195 ~~~~i~~~---~l~~~~~v~D~~y~p 217 (271)
T 1nyt_A 195 DIPAIPSS---LIHPGIYCYDMFYQK 217 (271)
T ss_dssp CCCCCCGG---GCCTTCEEEESCCCS
T ss_pred CCCCCCHH---HcCCCCEEEEeccCC
Confidence 11 2222 256788888887553
No 175
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.05 E-value=1.3e-05 Score=72.91 Aligned_cols=108 Identities=11% Similarity=0.221 Sum_probs=73.8
Q ss_pred CCEEEEEeeChhhHH-HHHHhcc-CCCeEE-EEcCCCCChh-HHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhcccc
Q 021995 117 GKTVGTVGCGRIGKL-LLQRLKP-FNCNLL-YHDRVKMDPQ-LEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 117 g~~vgIIG~G~IG~~-lA~~l~~-~G~~V~-~~dr~~~~~~-~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~ 192 (304)
-.+|||||+|.||+. +++.+.. -+++++ ++|+++...+ .++++|+..+.++++++.+.|+|++++|.....
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h~----- 80 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHY----- 80 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGHH-----
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhHH-----
Confidence 468999999999996 8888876 478876 7898764333 344567766789999999999999999955332
Q ss_pred HHHHhcCCCCCEEE-E-cCCCchhchHHHHHHHHcCCce
Q 021995 193 KDRIAKMKKGVLIV-N-NARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 193 ~~~l~~mk~g~ilV-n-~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
+-....++.|.-++ . -.--.+-+.++|.++.++..+.
T Consensus 81 ~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~ 119 (308)
T 3uuw_A 81 EIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKKNLN 119 (308)
T ss_dssp HHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCE
Confidence 22223344454333 2 2334455666788777775544
No 176
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.04 E-value=6.1e-06 Score=78.12 Aligned_cols=89 Identities=15% Similarity=0.123 Sum_probs=62.9
Q ss_pred CEEEEEeeChhhHHHHHHhcc-CCCeEEEEc---CCCCChhH-HHhcC------------c-------eecCCHHhhcCc
Q 021995 118 KTVGTVGCGRIGKLLLQRLKP-FNCNLLYHD---RVKMDPQL-EKETG------------A-------KFEEDLDTMLPK 173 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~-~G~~V~~~d---r~~~~~~~-~~~~g------------~-------~~~~~l~ell~~ 173 (304)
++|+|||.|.||..+|..|.. .|++|.+|+ +++...+. .++.+ . ....++++.++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG 82 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCC
Confidence 489999999999999999977 599999999 53222222 12111 1 133578888899
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEc
Q 021995 174 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNN 208 (304)
Q Consensus 174 aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~ 208 (304)
+|+|++++|... ...++ ++..+.+++++++|..
T Consensus 83 aD~Vilav~~~~-~~~v~-~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 83 ADVVILTVPAFA-HEGYF-QAMAPYVQDSALIVGL 115 (404)
T ss_dssp CSEEEECSCGGG-HHHHH-HHHTTTCCTTCEEEET
T ss_pred CCEEEEeCchHH-HHHHH-HHHHhhCCCCcEEEEc
Confidence 999999999543 33332 4455567889999984
No 177
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.02 E-value=9.1e-06 Score=74.69 Aligned_cols=105 Identities=11% Similarity=0.184 Sum_probs=69.6
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHHH-h-----------cCceecCCHHhhcCcCCEEEEcCCC
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEK-E-----------TGAKFEEDLDTMLPKCDIVVVNTPL 183 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~~-~-----------~g~~~~~~l~ell~~aDvVi~~~p~ 183 (304)
.++|+|||.|.||..+|..|...|+ +|+.||+++...+... + ..+....++ +.+++||+|+++++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASI 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 3689999999999999999988888 9999999764333210 0 012333566 678999999999842
Q ss_pred Ch-----------hhhcc---ccHHHHhcCCCCCEEEEcCCCchhchHHHHHHH
Q 021995 184 TE-----------KTRGM---FDKDRIAKMKKGVLIVNNARGAIMDTQAVVDAC 223 (304)
Q Consensus 184 ~~-----------~t~~~---i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL 223 (304)
.. .+..+ +-++ +....+++++|+++.+.-+....+.+..
T Consensus 83 p~~~g~~r~d~~~~~~~i~~~i~~~-i~~~~~~~iii~~sNp~~~~~~~~~~~~ 135 (317)
T 2ewd_A 83 PGRPKDDRSELLFGNARILDSVAEG-VKKYCPNAFVICITNPLDVMVSHFQKVS 135 (317)
T ss_dssp SSCCSSCGGGGHHHHHHHHHHHHHH-HHHHCTTSEEEECCSSHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHhhHHHHHHHHHH-HHHHCCCcEEEEeCChHHHHHHHHHHhh
Confidence 11 11111 1112 2223569999999987666666666654
No 178
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.02 E-value=3.8e-05 Score=70.22 Aligned_cols=107 Identities=17% Similarity=0.274 Sum_probs=74.0
Q ss_pred CEEEEEeeChhhHH-HHHHhcc-CCCeEE-EEcCCCCChhH-HHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccH
Q 021995 118 KTVGTVGCGRIGKL-LLQRLKP-FNCNLL-YHDRVKMDPQL-EKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 193 (304)
Q Consensus 118 ~~vgIIG~G~IG~~-lA~~l~~-~G~~V~-~~dr~~~~~~~-~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~ 193 (304)
.+|||||+|.||+. +++.+.. -+++++ ++|+++...+. ++.+|+..+++++++..++|+|++++|..... +
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h~-----~ 80 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHF-----D 80 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHH-----H
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhHH-----H
Confidence 48999999999996 8887765 478866 88988765543 44557666678888767899999999955332 2
Q ss_pred HHHhcCCCCC-EEEEc-CCCchhchHHHHHHHHcCCce
Q 021995 194 DRIAKMKKGV-LIVNN-ARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 194 ~~l~~mk~g~-ilVn~-~rg~~vd~~aL~~aL~~g~i~ 229 (304)
.....++.|. +++.- .-..+-+.+.|.++.++..+.
T Consensus 81 ~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 118 (319)
T 1tlt_A 81 VVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLT 118 (319)
T ss_dssp HHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 2333455665 55542 233455667788888776655
No 179
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.01 E-value=7.4e-06 Score=75.62 Aligned_cols=107 Identities=9% Similarity=0.018 Sum_probs=78.3
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHH-----------hcC--------------ceecCCHHhh
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-----------ETG--------------AKFEEDLDTM 170 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~-----------~~g--------------~~~~~~l~el 170 (304)
.-.+|+|||.|.||+.+|..+...|++|+.||+++...+... +.| +....++++.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a 84 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence 346899999999999999999999999999998753221110 001 2345688899
Q ss_pred cCcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHH
Q 021995 171 LPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACS 224 (304)
Q Consensus 171 l~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~ 224 (304)
+++||+|+=++|-+-+.+.-+-+++=+.++++++|-..+++ +....|.+.+.
T Consensus 85 ~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs--l~is~ia~~~~ 136 (319)
T 3ado_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLA 136 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCT
T ss_pred hccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh--ccchhhhhhcc
Confidence 99999999999988877776666666778999998655544 44456665543
No 180
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.01 E-value=1.6e-05 Score=73.81 Aligned_cols=69 Identities=14% Similarity=0.299 Sum_probs=55.3
Q ss_pred CEEEEEeeChhhHHHHHHhccC-CCeEE-EEcCCCCChh-HHHhcCceecCCHHhhc--CcCCEEEEcCCCChh
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQ-LEKETGAKFEEDLDTML--PKCDIVVVNTPLTEK 186 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~-G~~V~-~~dr~~~~~~-~~~~~g~~~~~~l~ell--~~aDvVi~~~p~~~~ 186 (304)
.+|||||+|.||+..++.++.. +++++ ++|+++...+ .++.+|+..+.++++++ .+.|+|++++|....
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h 79 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKH 79 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSH
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHH
Confidence 4899999999999999999877 88865 7788764333 34456777788999999 679999999996543
No 181
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.00 E-value=1.1e-05 Score=75.35 Aligned_cols=68 Identities=22% Similarity=0.307 Sum_probs=55.8
Q ss_pred CEEEEEeeChhhHHHHHHhccC-CCeEE-EEcCCCCChhHHHhcCceecCCHHhhcC--cCCEEEEcCCCCh
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLTE 185 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~-G~~V~-~~dr~~~~~~~~~~~g~~~~~~l~ell~--~aDvVi~~~p~~~ 185 (304)
.+|||||+|.||+..++.++.. +++++ ++|+++...+.++..|+..+.+++++++ +.|+|++|+|...
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~ 77 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDS 77 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGG
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHH
Confidence 5899999999999999998876 78875 6788765555556678877889999987 7999999999643
No 182
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.96 E-value=2.6e-05 Score=70.40 Aligned_cols=94 Identities=16% Similarity=0.122 Sum_probs=63.5
Q ss_pred ccccCCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhH-HHhcC---ceecCCHHhhc-CcCCEEEEcCCCCh
Q 021995 112 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQL-EKETG---AKFEEDLDTML-PKCDIVVVNTPLTE 185 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~-~~~~g---~~~~~~l~ell-~~aDvVi~~~p~~~ 185 (304)
+.++.|+++.|+|.|.+|+.++..|...|+ +|++++|+..+.+. +++.+ +.. .+++++- .++|+|+.++|...
T Consensus 115 ~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~-~~~~~l~~~~~DivInaTp~gm 193 (272)
T 3pwz_A 115 GEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRI-SRYEALEGQSFDIVVNATSASL 193 (272)
T ss_dssp CCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEE-ECSGGGTTCCCSEEEECSSGGG
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeE-eeHHHhcccCCCEEEECCCCCC
Confidence 346889999999999999999999999996 89999997643332 23332 222 2344443 78999999998643
Q ss_pred hhh-ccccHHHHhcCCCCCEEEEcC
Q 021995 186 KTR-GMFDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 186 ~t~-~~i~~~~l~~mk~g~ilVn~~ 209 (304)
... ..+.. +.++++.+++|+.
T Consensus 194 ~~~~~~i~~---~~l~~~~~V~Dlv 215 (272)
T 3pwz_A 194 TADLPPLPA---DVLGEAALAYELA 215 (272)
T ss_dssp GTCCCCCCG---GGGTTCSEEEESS
T ss_pred CCCCCCCCH---HHhCcCCEEEEee
Confidence 211 12232 2356677766664
No 183
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.94 E-value=1.9e-05 Score=72.62 Aligned_cols=106 Identities=19% Similarity=0.239 Sum_probs=68.7
Q ss_pred CEEEEEeeChhhHHHHHHhccC-CCeEE-EEcCCCCChh-HHHhcCceecCCHHhhcC--cCCEEEEcCCCChhhhcccc
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQ-LEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~-G~~V~-~~dr~~~~~~-~~~~~g~~~~~~l~ell~--~aDvVi~~~p~~~~t~~~i~ 192 (304)
.+|||||+|.||+.+++.+... +++++ ++|+++...+ .++.+++. +.+++++++ +.|+|++++|......
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h~~---- 78 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDTHAD---- 78 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGGHHH----
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchhHHH----
Confidence 4899999999999999998865 78876 6888764333 34456777 789999987 7999999999653321
Q ss_pred HHHHhcCCCCCEEEE-c-CCCchhchHHHHHHHHcCCce
Q 021995 193 KDRIAKMKKGVLIVN-N-ARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 193 ~~~l~~mk~g~ilVn-~-~rg~~vd~~aL~~aL~~g~i~ 229 (304)
.....++.|.-++. - ..-.+-+.+.|.++.++..+.
T Consensus 79 -~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (331)
T 4hkt_A 79 -LIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAK 116 (331)
T ss_dssp -HHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred -HHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCe
Confidence 12223334433332 1 122334445566655554443
No 184
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.94 E-value=1.7e-05 Score=73.32 Aligned_cols=68 Identities=22% Similarity=0.365 Sum_probs=54.6
Q ss_pred CEEEEEeeChhhHHHHHHhccC-CCeEE-EEcCCCCChh-HHHhcCceecCCHHhhcC--cCCEEEEcCCCCh
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQ-LEKETGAKFEEDLDTMLP--KCDIVVVNTPLTE 185 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~-G~~V~-~~dr~~~~~~-~~~~~g~~~~~~l~ell~--~aDvVi~~~p~~~ 185 (304)
.+|||||+|.||+.+++.+... +++++ ++|+++...+ .++.+|...+.+++++++ +.|+|++++|...
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~ 77 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTST 77 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGG
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchh
Confidence 4899999999999999998765 78866 7888764333 344567777889999998 8999999999654
No 185
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=97.93 E-value=5.1e-06 Score=78.56 Aligned_cols=83 Identities=19% Similarity=0.295 Sum_probs=68.8
Q ss_pred CCCEEEEEee-ChhhHHHHHHhccCCC---eEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccc
Q 021995 116 EGKTVGTVGC-GRIGKLLLQRLKPFNC---NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF 191 (304)
Q Consensus 116 ~g~~vgIIG~-G~IG~~lA~~l~~~G~---~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i 191 (304)
...+|.|||. |..|...++.++++|+ .|.++|++.. ..|.. + +.+.++|+||.|+........++
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~------~~g~~----~-~~i~~aDivIn~vlig~~aP~Lv 281 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKET------SRGGP----F-DEIPQADIFINCIYLSKPIAPFT 281 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHH------TTCSC----C-THHHHSSEEEECCCCCSSCCCSC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccc------ccCCc----h-hhHhhCCEEEECcCcCCCCCccc
Confidence 3568999999 9999999999999998 8999997531 11322 2 33559999999998876777899
Q ss_pred cHHHHhcC-CCCCEEEEcC
Q 021995 192 DKDRIAKM-KKGVLIVNNA 209 (304)
Q Consensus 192 ~~~~l~~m-k~g~ilVn~~ 209 (304)
.++.++.| |+|+++||++
T Consensus 282 t~e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 282 NMEKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp CHHHHCCTTCCCCEEEETT
T ss_pred CHHHHhcCcCCCeEEEEEe
Confidence 99999999 9999999997
No 186
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.93 E-value=3.4e-05 Score=62.58 Aligned_cols=104 Identities=15% Similarity=0.179 Sum_probs=74.7
Q ss_pred CCCEEEEEee----ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccc
Q 021995 116 EGKTVGTVGC----GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMF 191 (304)
Q Consensus 116 ~g~~vgIIG~----G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i 191 (304)
.-++|+|||. |++|+.+++.|+..|++|+..++.....+ -.|...+.+++|+-...|++++++|. +....++
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~---i~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~ 87 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEE---LFGEEAVASLLDLKEPVDILDVFRPP-SALMDHL 87 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSE---ETTEECBSSGGGCCSCCSEEEECSCH-HHHTTTH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCc---CCCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHH
Confidence 3568999999 89999999999999999777766411111 13667777899998899999999996 4555555
Q ss_pred cHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 192 DKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 192 ~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
++..+ .....++++.+-. ++++.+..++..+.
T Consensus 88 -~~~~~-~gi~~i~~~~g~~----~~~~~~~a~~~Gir 119 (140)
T 1iuk_A 88 -PEVLA-LRPGLVWLQSGIR----HPEFEKALKEAGIP 119 (140)
T ss_dssp -HHHHH-HCCSCEEECTTCC----CHHHHHHHHHTTCC
T ss_pred -HHHHH-cCCCEEEEcCCcC----HHHHHHHHHHcCCE
Confidence 34444 3334666665432 67888888877666
No 187
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.92 E-value=1.7e-05 Score=73.66 Aligned_cols=69 Identities=29% Similarity=0.391 Sum_probs=55.1
Q ss_pred CCEEEEEeeChhhHHHHHHhccC--CCeEE-EEcCCCCChh-HHHhcCceecCCHHhhcC--cCCEEEEcCCCCh
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPF--NCNLL-YHDRVKMDPQ-LEKETGAKFEEDLDTMLP--KCDIVVVNTPLTE 185 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~--G~~V~-~~dr~~~~~~-~~~~~g~~~~~~l~ell~--~aDvVi~~~p~~~ 185 (304)
-.+|||||+|.||+..++.+... +++++ ++|+++...+ .++++|+..+.+++++++ +.|+|++++|...
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 87 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGL 87 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGGG
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcHH
Confidence 35899999999999999998866 78865 7888764333 345568877889999986 7999999999543
No 188
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.91 E-value=3.5e-05 Score=69.86 Aligned_cols=93 Identities=18% Similarity=0.208 Sum_probs=64.6
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhH-HHhcC-------ceec--CCHHhhcCcCCEEEEcCC
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQL-EKETG-------AKFE--EDLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~-~~~~g-------~~~~--~~l~ell~~aDvVi~~~p 182 (304)
.+.|+++.|+|.|.+|+.++..|...|+ +|++++|+..+.+. +++.+ +... +++++.++++|+|+.++|
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATP 203 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSS
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCC
Confidence 5889999999999999999999999999 69999997643332 22211 1222 378888899999999998
Q ss_pred CChhhh--ccccHHHHhcCCCCCEEEEcC
Q 021995 183 LTEKTR--GMFDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 183 ~~~~t~--~~i~~~~l~~mk~g~ilVn~~ 209 (304)
..-... -.+. ...++++.+++|+.
T Consensus 204 ~Gm~~~~~~pi~---~~~l~~~~~v~Dlv 229 (283)
T 3jyo_A 204 MGMPAHPGTAFD---VSCLTKDHWVGDVV 229 (283)
T ss_dssp TTSTTSCSCSSC---GGGCCTTCEEEECC
T ss_pred CCCCCCCCCCCC---HHHhCCCCEEEEec
Confidence 642211 1122 23456666666664
No 189
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.88 E-value=2.7e-05 Score=71.40 Aligned_cols=105 Identities=13% Similarity=0.252 Sum_probs=66.1
Q ss_pred EEEEEeeChhhHHHHHHhccC-CCeEE-EEcCCCCChh-HHHhcCc-eecCCHHhhc-CcCCEEEEcCCCChhhhccccH
Q 021995 119 TVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQ-LEKETGA-KFEEDLDTML-PKCDIVVVNTPLTEKTRGMFDK 193 (304)
Q Consensus 119 ~vgIIG~G~IG~~lA~~l~~~-G~~V~-~~dr~~~~~~-~~~~~g~-~~~~~l~ell-~~aDvVi~~~p~~~~t~~~i~~ 193 (304)
+|||||+|.||+.+++.+... +++++ ++|+++...+ .++.+|. ..+.++++++ ++.|+|++++|..... +
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~~h~-----~ 77 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSLHF-----A 77 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGGGHH-----H
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChHHHH-----H
Confidence 799999999999999988765 67764 7888653332 2334454 5567999999 7899999999954321 1
Q ss_pred HHHhcCCCCC-EEEEc-CCCchhchHHHHHHHHcCCc
Q 021995 194 DRIAKMKKGV-LIVNN-ARGAIMDTQAVVDACSSGHI 228 (304)
Q Consensus 194 ~~l~~mk~g~-ilVn~-~rg~~vd~~aL~~aL~~g~i 228 (304)
-..+.++.|. +++.- .--.+-+.++|.++.++..+
T Consensus 78 ~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~g~ 114 (325)
T 2ho3_A 78 QAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKNNC 114 (325)
T ss_dssp HHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHHcCC
Confidence 2223344444 34432 12233344556655555443
No 190
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.88 E-value=2.2e-05 Score=71.22 Aligned_cols=94 Identities=20% Similarity=0.177 Sum_probs=63.5
Q ss_pred cccCCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHH-HhcCceecCCHHhhcCcCCEEEEcCCCCh--hhh
Q 021995 113 YDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLE-KETGAKFEEDLDTMLPKCDIVVVNTPLTE--KTR 188 (304)
Q Consensus 113 ~~L~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~-~~~g~~~~~~l~ell~~aDvVi~~~p~~~--~t~ 188 (304)
.++.|+++.|+|.|.+|+.++..|...|+ +|++++|+..+.+.. .......++++++ + ++|+|+.++|..- ...
T Consensus 118 ~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~~~~ 195 (282)
T 3fbt_A 118 VEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYPKEG 195 (282)
T ss_dssp CCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTTSTT
T ss_pred CCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccCCCc
Confidence 35789999999999999999999999998 899999976333222 1111222334445 4 8999999998632 111
Q ss_pred -ccccHHHHhcCCCCCEEEEcCCC
Q 021995 189 -GMFDKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 189 -~~i~~~~l~~mk~g~ilVn~~rg 211 (304)
-.++.+. ++++.+++|+.-.
T Consensus 196 ~~pi~~~~---l~~~~~v~DlvY~ 216 (282)
T 3fbt_A 196 ESPVDKEV---VAKFSSAVDLIYN 216 (282)
T ss_dssp CCSSCHHH---HTTCSEEEESCCS
T ss_pred cCCCCHHH---cCCCCEEEEEeeC
Confidence 1244444 4567777777543
No 191
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.88 E-value=3e-05 Score=74.53 Aligned_cols=106 Identities=12% Similarity=0.116 Sum_probs=71.9
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHH-------------------hc-CceecCCHHhhcCcCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-------------------ET-GAKFEEDLDTMLPKCD 175 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~-------------------~~-g~~~~~~l~ell~~aD 175 (304)
+-.+|+|||+|-+|-.+|..|...|++|+++|.++.+.+... .. ......+.++.++.||
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad 99 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATD 99 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSS
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCC
Confidence 456999999999999999999989999999998643221111 11 1344567888899999
Q ss_pred EEEEcCCCChhhhcccc--------HHHHhcCC---CCCEEEEcCCCchhchHHHHH
Q 021995 176 IVVVNTPLTEKTRGMFD--------KDRIAKMK---KGVLIVNNARGAIMDTQAVVD 221 (304)
Q Consensus 176 vVi~~~p~~~~t~~~i~--------~~~l~~mk---~g~ilVn~~rg~~vd~~aL~~ 221 (304)
++++|+|......+-.| +..-+.|+ ++.++|.-|.-.+=-.+.+..
T Consensus 100 ~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~ 156 (444)
T 3vtf_A 100 ATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVA 156 (444)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHH
T ss_pred ceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHH
Confidence 99999974221111111 22223343 688999999877655555544
No 192
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.88 E-value=3.6e-05 Score=71.00 Aligned_cols=107 Identities=14% Similarity=0.159 Sum_probs=71.2
Q ss_pred CEEEEEeeChhhHHHHHHhc-c-CCCeE-EEEcCCCCChh-HHHhcCc-eecCCHHhhcC--cCCEEEEcCCCChhhhcc
Q 021995 118 KTVGTVGCGRIGKLLLQRLK-P-FNCNL-LYHDRVKMDPQ-LEKETGA-KFEEDLDTMLP--KCDIVVVNTPLTEKTRGM 190 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~-~-~G~~V-~~~dr~~~~~~-~~~~~g~-~~~~~l~ell~--~aDvVi~~~p~~~~t~~~ 190 (304)
.+|||||+|.||+..++.++ . -++++ .++|+++...+ .++++|. ..+.+++++++ ++|+|++++|.....
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~--- 85 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHP--- 85 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGHH---
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhHH---
Confidence 48999999999999999887 4 47885 57888754333 3344576 55678999987 699999999954321
Q ss_pred ccHHHHhcCCCCCEEEEc--CCCchhchHHHHHHHHcC-Cce
Q 021995 191 FDKDRIAKMKKGVLIVNN--ARGAIMDTQAVVDACSSG-HIA 229 (304)
Q Consensus 191 i~~~~l~~mk~g~ilVn~--~rg~~vd~~aL~~aL~~g-~i~ 229 (304)
+...+.++.|.-++.- .-..+-+.+.|.++.++. .+.
T Consensus 86 --~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~ 125 (346)
T 3cea_A 86 --EMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQI 125 (346)
T ss_dssp --HHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSC
T ss_pred --HHHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCe
Confidence 2333445666544321 122334455677777776 555
No 193
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=97.88 E-value=1.5e-05 Score=72.80 Aligned_cols=105 Identities=16% Similarity=0.226 Sum_probs=67.0
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCC----------HHhhcCcCCEEEEcCCCChhh
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEED----------LDTMLPKCDIVVVNTPLTEKT 187 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~----------l~ell~~aDvVi~~~p~~~~t 187 (304)
++|+|||.|.||..++..|. .|.+|.+++|+....+..++.|.....+ -.+....+|+|+++++... +
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~~-~ 80 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQHQ-L 80 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCGGG-H
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCHHH-H
Confidence 68999999999999999999 8999999999754334444455432100 0245678999999998532 2
Q ss_pred hccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCc
Q 021995 188 RGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHI 228 (304)
Q Consensus 188 ~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i 228 (304)
...+ +.++.+.++. +|.+.-|=-. ++.+.+.+...++
T Consensus 81 ~~~l--~~l~~~~~~~-ivs~~nGi~~-~e~l~~~~~~~~v 117 (307)
T 3ego_A 81 QSVF--SSLERIGKTN-ILFLQNGMGH-IHDLKDWHVGHSI 117 (307)
T ss_dssp HHHH--HHTTSSCCCE-EEECCSSSHH-HHHHHTCCCSCEE
T ss_pred HHHH--HHhhcCCCCe-EEEecCCccH-HHHHHHhCCCCcE
Confidence 2222 2333344556 8887776432 2334444444444
No 194
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=97.87 E-value=2.5e-06 Score=77.51 Aligned_cols=96 Identities=11% Similarity=0.052 Sum_probs=65.5
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCc---eecCCHHhhc-CcCCEEEEcCCCChhhhccccH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA---KFEEDLDTML-PKCDIVVVNTPLTEKTRGMFDK 193 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~---~~~~~l~ell-~~aDvVi~~~p~~~~t~~~i~~ 193 (304)
++|+|||.|.||..++..|...|.+|.+++|+....+.....|. ....+..+.+ ..+|+|++++|.. .+...+ +
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~-~~~~~l-~ 80 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTH-QLDAVI-P 80 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGG-GHHHHG-G
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCcc-CHHHHH-H
Confidence 58999999999999999999889999999997532222222231 1111333444 7899999999954 333333 3
Q ss_pred HHHhcCCCCCEEEEcCCCchhc
Q 021995 194 DRIAKMKKGVLIVNNARGAIMD 215 (304)
Q Consensus 194 ~~l~~mk~g~ilVn~~rg~~vd 215 (304)
+.-+.+++++++|.+.-|=-..
T Consensus 81 ~l~~~l~~~~~iv~~~nGi~~~ 102 (294)
T 3g17_A 81 HLTYLAHEDTLIILAQNGYGQL 102 (294)
T ss_dssp GHHHHEEEEEEEEECCSSCCCG
T ss_pred HHHHhhCCCCEEEEeccCcccH
Confidence 4445567888999998875443
No 195
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.86 E-value=6e-05 Score=61.38 Aligned_cols=101 Identities=12% Similarity=0.092 Sum_probs=73.3
Q ss_pred CCEEEEEee----ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhcccc
Q 021995 117 GKTVGTVGC----GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 117 g~~vgIIG~----G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~ 192 (304)
-++|+|||. |.+|..+++.|+..|++|+..++.. .+ -.|...+.+++++....|++++++|. +....++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~--~~---i~G~~~y~sl~~l~~~vDlvvi~vp~-~~~~~vv- 94 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKY--EE---VLGRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYV- 94 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC--SE---ETTEECBSSGGGCSSCCSEEEECSCH-HHHHHHH-
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCC--Ce---ECCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHH-
Confidence 579999999 7999999999999999977776643 21 14667777899998899999999996 4444444
Q ss_pred HHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 193 KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 193 ~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
++..+ .....+++..+ . .++++.+..++..+.
T Consensus 95 ~~~~~-~gi~~i~~~~g--~--~~~~l~~~a~~~Gi~ 126 (144)
T 2d59_A 95 EQAIK-KGAKVVWFQYN--T--YNREASKKADEAGLI 126 (144)
T ss_dssp HHHHH-HTCSEEEECTT--C--CCHHHHHHHHHTTCE
T ss_pred HHHHH-cCCCEEEECCC--c--hHHHHHHHHHHcCCE
Confidence 33333 23345665543 2 378888888887766
No 196
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.86 E-value=6.4e-05 Score=69.19 Aligned_cols=96 Identities=14% Similarity=0.104 Sum_probs=63.3
Q ss_pred ccccCCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHHH----h----cCc----eecCC---HHhhcCcCC
Q 021995 112 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEK----E----TGA----KFEED---LDTMLPKCD 175 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~~----~----~g~----~~~~~---l~ell~~aD 175 (304)
+.++.|+++.|+|.|.+|+.++..|...|+ +|++++|+....+.++ + .+. ...++ +.+.+.++|
T Consensus 149 ~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aD 228 (315)
T 3tnl_A 149 GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESV 228 (315)
T ss_dssp TCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred CCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCC
Confidence 456899999999999999999999999999 8999999832222222 1 111 12223 456678999
Q ss_pred EEEEcCCCChhhh--c-cccHHHHhcCCCCCEEEEcC
Q 021995 176 IVVVNTPLTEKTR--G-MFDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 176 vVi~~~p~~~~t~--~-~i~~~~l~~mk~g~ilVn~~ 209 (304)
+|+.++|..-... . .+. ....++++.+++|+.
T Consensus 229 iIINaTp~Gm~~~~~~~p~~--~~~~l~~~~~V~Dlv 263 (315)
T 3tnl_A 229 IFTNATGVGMKPFEGETLLP--SADMLRPELIVSDVV 263 (315)
T ss_dssp EEEECSSTTSTTSTTCCSCC--CGGGCCTTCEEEESC
T ss_pred EEEECccCCCCCCCCCCCCC--cHHHcCCCCEEEEec
Confidence 9999998642111 1 120 123456677766664
No 197
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.86 E-value=4e-05 Score=70.03 Aligned_cols=67 Identities=15% Similarity=0.312 Sum_probs=49.4
Q ss_pred CEEEEEeeChhhHHHHHHhccCC--CeEEEEcCCCCChhHHH-hc---------Ccee-cCCHHhhcCcCCEEEEcCCCC
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFN--CNLLYHDRVKMDPQLEK-ET---------GAKF-EEDLDTMLPKCDIVVVNTPLT 184 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G--~~V~~~dr~~~~~~~~~-~~---------g~~~-~~~l~ell~~aDvVi~~~p~~ 184 (304)
++|+|||.|.||..+|..|...| .+|.++|++....+... +. .... ..++ +.+++||+|++++|..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGNI 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCCc
Confidence 58999999999999999998777 78999999753322211 11 1222 3466 6789999999999864
Q ss_pred h
Q 021995 185 E 185 (304)
Q Consensus 185 ~ 185 (304)
.
T Consensus 81 ~ 81 (309)
T 1hyh_A 81 K 81 (309)
T ss_dssp G
T ss_pred c
Confidence 3
No 198
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.84 E-value=1.5e-05 Score=72.89 Aligned_cols=106 Identities=17% Similarity=0.291 Sum_probs=68.4
Q ss_pred CEEEEEeeChhhHHHHHHhccC-CCeE-EEEcCCCCChhHHHhcCceecCCHHhhcC--cCCEEEEcCCCChhhhccccH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF-NCNL-LYHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMFDK 193 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~-G~~V-~~~dr~~~~~~~~~~~g~~~~~~l~ell~--~aDvVi~~~p~~~~t~~~i~~ 193 (304)
.+|||||+|.||+.+++.+... ++++ .++|+++...+...+. +..+.+++++++ ++|+|++++|..... +
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~tp~~~h~-----~ 84 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG-CVIESDWRSVVSAPEVEAVIIATPPATHA-----E 84 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT-CEEESSTHHHHTCTTCCEEEEESCGGGHH-----H
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh-CcccCCHHHHhhCCCCCEEEEeCChHHHH-----H
Confidence 4899999999999999998765 6775 4888865322222122 445678999985 799999999954321 2
Q ss_pred HHHhcCCCCC-EEEEc-CCCchhchHHHHHHHHcCCce
Q 021995 194 DRIAKMKKGV-LIVNN-ARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 194 ~~l~~mk~g~-ilVn~-~rg~~vd~~aL~~aL~~g~i~ 229 (304)
-..+.++.|. +++.- .--.+-+.+.|.++.++..+.
T Consensus 85 ~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 122 (315)
T 3c1a_A 85 ITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVM 122 (315)
T ss_dssp HHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCE
Confidence 2233455664 45542 223445556677776665544
No 199
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.84 E-value=5.9e-05 Score=69.39 Aligned_cols=102 Identities=15% Similarity=0.152 Sum_probs=69.8
Q ss_pred CEEEEEeeChhhHHHHHHhccC-CCeE-EEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHHH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF-NCNL-LYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDR 195 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~-G~~V-~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~ 195 (304)
.+|||||+|+||+.+++.+... ++++ .++|++... ... .++..+.++++++.++|+|++++|..... +..
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~-~~~--~gv~~~~d~~~ll~~~DvViiatp~~~h~-----~~~ 75 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL-DTK--TPVFDVADVDKHADDVDVLFLCMGSATDI-----PEQ 75 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC-SSS--SCEEEGGGGGGTTTTCSEEEECSCTTTHH-----HHH
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH-hhc--CCCceeCCHHHHhcCCCEEEEcCCcHHHH-----HHH
Confidence 4799999999999999998765 6775 578887533 211 45655678888888899999999854321 334
Q ss_pred HhcCCCCCEEEEcCCCch-h-ch-HHHHHHHHcCC
Q 021995 196 IAKMKKGVLIVNNARGAI-M-DT-QAVVDACSSGH 227 (304)
Q Consensus 196 l~~mk~g~ilVn~~rg~~-v-d~-~aL~~aL~~g~ 227 (304)
...++.|.-+|...-..+ + +. +.|.++.+++.
T Consensus 76 ~~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~ 110 (320)
T 1f06_A 76 APKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAG 110 (320)
T ss_dssp HHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCC
Confidence 456677877776554332 2 33 45666666544
No 200
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.83 E-value=6e-05 Score=67.16 Aligned_cols=100 Identities=17% Similarity=0.146 Sum_probs=74.0
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCeE-EEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHH
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNL-LYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKD 194 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~V-~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~ 194 (304)
+.++|+++|+|+||+.+++. . ++++ .+|+ .+ .. ++|+....++++++.++|+|+-|.+. ..+.+.
T Consensus 11 ~~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~--~k-~g---elgv~a~~d~d~lla~pD~VVe~A~~-----~av~e~ 76 (253)
T 1j5p_A 11 HHMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD--RI-SK---DIPGVVRLDEFQVPSDVSTVVECASP-----EAVKEY 76 (253)
T ss_dssp CCCEEEEECCSHHHHHHHHH--S-CCSEEEEEC--SS-CC---CCSSSEECSSCCCCTTCCEEEECSCH-----HHHHHH
T ss_pred ccceEEEECcCHHHHHHHhc--C-CcEEEEEEe--cc-cc---ccCceeeCCHHHHhhCCCEEEECCCH-----HHHHHH
Confidence 56799999999999999998 4 8885 5666 21 11 22666677899999999999888752 133344
Q ss_pred HHhcCCCCCEEEEcCCCchhch---HHHHHHHHcCCce
Q 021995 195 RIAKMKKGVLIVNNARGAIMDT---QAVVDACSSGHIA 229 (304)
Q Consensus 195 ~l~~mk~g~ilVn~~rg~~vd~---~aL~~aL~~g~i~ 229 (304)
..+.|+.|.-+|-++-|.+.|. +.|.++.++|.-.
T Consensus 77 ~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~ 114 (253)
T 1j5p_A 77 SLQILKNPVNYIIISTSAFADEVFRERFFSELKNSPAR 114 (253)
T ss_dssp HHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCE
T ss_pred HHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCe
Confidence 6677899999999999988887 4566666665533
No 201
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.83 E-value=3.4e-05 Score=71.71 Aligned_cols=71 Identities=21% Similarity=0.234 Sum_probs=54.2
Q ss_pred cCCCEEEEEeeChhhH-HHHHHhccC-CCeEE-EEcCCCCChh-HHHhcCceecCCHHhhcC--cCCEEEEcCCCCh
Q 021995 115 LEGKTVGTVGCGRIGK-LLLQRLKPF-NCNLL-YHDRVKMDPQ-LEKETGAKFEEDLDTMLP--KCDIVVVNTPLTE 185 (304)
Q Consensus 115 L~g~~vgIIG~G~IG~-~lA~~l~~~-G~~V~-~~dr~~~~~~-~~~~~g~~~~~~l~ell~--~aDvVi~~~p~~~ 185 (304)
..-.+|||||+|.||+ .+++.++.. +++|+ ++|+++...+ .++++|+..+.+++++++ +.|+|++++|...
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~ 101 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVL 101 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGG
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHH
Confidence 3446899999999998 788888766 78865 7788753333 345568877789999997 5899999999553
No 202
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.81 E-value=3e-05 Score=71.39 Aligned_cols=68 Identities=15% Similarity=0.131 Sum_probs=53.5
Q ss_pred CEEEEEeeChhhHHHHHHhccC-CCeEE-EEcCCCCChh-HHHhcCc-eecCCHHhhcC--cCCEEEEcCCCCh
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQ-LEKETGA-KFEEDLDTMLP--KCDIVVVNTPLTE 185 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~-G~~V~-~~dr~~~~~~-~~~~~g~-~~~~~l~ell~--~aDvVi~~~p~~~ 185 (304)
.+|||||+|.||+.+++.++.. +++|+ ++|+++...+ .++.+++ ..+.++++++. +.|+|++++|...
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 79 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQG 79 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGG
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHH
Confidence 5899999999999999999864 77866 6788764433 3445676 46789999987 7999999999654
No 203
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.80 E-value=3.7e-05 Score=70.53 Aligned_cols=106 Identities=13% Similarity=0.224 Sum_probs=67.2
Q ss_pred EEEEEeeChhhHHH-HHHhccCCCeEE-EEcCCCCChh-HHHhcCce-ecCCHHhhcC--cCCEEEEcCCCChhhhcccc
Q 021995 119 TVGTVGCGRIGKLL-LQRLKPFNCNLL-YHDRVKMDPQ-LEKETGAK-FEEDLDTMLP--KCDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 119 ~vgIIG~G~IG~~l-A~~l~~~G~~V~-~~dr~~~~~~-~~~~~g~~-~~~~l~ell~--~aDvVi~~~p~~~~t~~~i~ 192 (304)
+|||||+|.||+.+ ++.+...+++++ ++|+++...+ .++++|.. .+.+++++++ ++|+|++++|.....
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~----- 76 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHR----- 76 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHH-----
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhH-----
Confidence 79999999999998 777665788865 7888764333 34455663 5678999987 499999999954321
Q ss_pred HHHHhcCCCCC-EEEEc-CCCchhchHHHHHHHHcCCce
Q 021995 193 KDRIAKMKKGV-LIVNN-ARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 193 ~~~l~~mk~g~-ilVn~-~rg~~vd~~aL~~aL~~g~i~ 229 (304)
+.....++.|. +++.- .....-+.+.|.++.++..+.
T Consensus 77 ~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~ 115 (332)
T 2glx_A 77 EQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVV 115 (332)
T ss_dssp HHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCE
Confidence 22233445565 33331 122344445566665554443
No 204
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.80 E-value=5.4e-05 Score=69.60 Aligned_cols=68 Identities=16% Similarity=0.246 Sum_probs=51.3
Q ss_pred CEEEEEeeChhhHHHHHHhccC-CCeEE-EEcCCCCChh-HHHhcCce-ecCCHHhhcC--cCCEEEEcCCCCh
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQ-LEKETGAK-FEEDLDTMLP--KCDIVVVNTPLTE 185 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~-G~~V~-~~dr~~~~~~-~~~~~g~~-~~~~l~ell~--~aDvVi~~~p~~~ 185 (304)
.+|||||+|.||+.+++.++.. +++++ ++|+++...+ .++++++. .+.++++++. +.|+|++++|...
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 79 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQD 79 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGG
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHH
Confidence 5899999999999999888754 56655 7788775443 34455663 6789999998 7999999999543
No 205
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.78 E-value=5.9e-05 Score=69.11 Aligned_cols=107 Identities=14% Similarity=0.185 Sum_probs=68.6
Q ss_pred CEEEEEeeChhhH-HHHHHhccC-CCeEEEEcCCCCChh-HHHhcCcee-cCCHHhhc-CcCCEEEEcCCCChhhhcccc
Q 021995 118 KTVGTVGCGRIGK-LLLQRLKPF-NCNLLYHDRVKMDPQ-LEKETGAKF-EEDLDTML-PKCDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 118 ~~vgIIG~G~IG~-~lA~~l~~~-G~~V~~~dr~~~~~~-~~~~~g~~~-~~~l~ell-~~aDvVi~~~p~~~~t~~~i~ 192 (304)
.+|||||+|.||+ .+++.+... +++++++|+++...+ .++++|+.. +.+..+++ .++|+|++++|.....
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h~----- 77 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVHS----- 77 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGHH-----
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhHH-----
Confidence 3799999999998 488888764 788779998764333 334556643 33445555 6899999999944221
Q ss_pred HHHHhcCCCCC-EEEEc-CCCchhchHHHHHHHHcCCce
Q 021995 193 KDRIAKMKKGV-LIVNN-ARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 193 ~~~l~~mk~g~-ilVn~-~rg~~vd~~aL~~aL~~g~i~ 229 (304)
+-..+.++.|. +++.- .--.+-+.+.|.++.++..+.
T Consensus 78 ~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (323)
T 1xea_A 78 TLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP 116 (323)
T ss_dssp HHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCe
Confidence 22223445554 55542 223344566788877776655
No 206
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.77 E-value=3.4e-05 Score=62.87 Aligned_cols=90 Identities=12% Similarity=0.064 Sum_probs=58.0
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCC-CChhHHH---hcCceec-------CCHHhh-cCcCCEEEEcCCCC
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVK-MDPQLEK---ETGAKFE-------EDLDTM-LPKCDIVVVNTPLT 184 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~-~~~~~~~---~~g~~~~-------~~l~el-l~~aDvVi~~~p~~ 184 (304)
.+++.|+|+|.+|+.+++.|...|++|+++++++ ...+... ..|+... +.+++. +.++|+|+++++..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 4689999999999999999999999999999863 1111111 1233211 123444 78999999999865
Q ss_pred hhhhccccHHHHhcCCCCCEEEEc
Q 021995 185 EKTRGMFDKDRIAKMKKGVLIVNN 208 (304)
Q Consensus 185 ~~t~~~i~~~~l~~mk~g~ilVn~ 208 (304)
+.+ +.-....+.+.+...+|..
T Consensus 83 ~~n--~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 83 ADN--AFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp HHH--HHHHHHHHHHTSSSCEEEE
T ss_pred HHH--HHHHHHHHHHCCCCEEEEE
Confidence 443 2224455555444444443
No 207
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.77 E-value=4.9e-05 Score=70.26 Aligned_cols=68 Identities=24% Similarity=0.381 Sum_probs=53.0
Q ss_pred CEEEEEeeChhhHHHHHHhccC-CCeEE-EEcCCCCChh-HHHhcCc-eecCCHHhhcC--cCCEEEEcCCCCh
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQ-LEKETGA-KFEEDLDTMLP--KCDIVVVNTPLTE 185 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~-G~~V~-~~dr~~~~~~-~~~~~g~-~~~~~l~ell~--~aDvVi~~~p~~~ 185 (304)
.+|||||+|.||+.+++.+... +++++ ++|+++...+ .++.+++ ..+.+++++++ ++|+|++++|...
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 76 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNT 76 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcc
Confidence 4899999999999999998764 77866 6888764333 3445665 36789999988 7999999999543
No 208
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.75 E-value=5.8e-05 Score=68.29 Aligned_cols=94 Identities=18% Similarity=0.243 Sum_probs=65.0
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHH-HhcCc---------eecCCHHhhcCcCCEEEEcCCC
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLE-KETGA---------KFEEDLDTMLPKCDIVVVNTPL 183 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~-~~~g~---------~~~~~l~ell~~aDvVi~~~p~ 183 (304)
++.|+++.|+|.|.+|+++++.|...| +|++++|+..+.+.. .+.+. ....++.+.+.++|+|+.++|.
T Consensus 125 ~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag~ 203 (287)
T 1nvt_A 125 RVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPI 203 (287)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCT
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCCC
Confidence 578999999999999999999999999 999999975332221 11110 0112335667889999999986
Q ss_pred Chhhh---ccc-cHHHHhcCCCCCEEEEcCCC
Q 021995 184 TEKTR---GMF-DKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 184 ~~~t~---~~i-~~~~l~~mk~g~ilVn~~rg 211 (304)
..... ..+ + .+.++++.+++|+...
T Consensus 204 ~~~~~~~~~~~~~---~~~l~~~~~v~Dv~y~ 232 (287)
T 1nvt_A 204 GMYPNIDVEPIVK---AEKLREDMVVMDLIYN 232 (287)
T ss_dssp TCTTCCSSCCSSC---STTCCSSSEEEECCCS
T ss_pred CCCCCCCCCCCCC---HHHcCCCCEEEEeeeC
Confidence 53210 012 2 3457888999998764
No 209
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.75 E-value=5.8e-05 Score=69.88 Aligned_cols=100 Identities=19% Similarity=0.155 Sum_probs=66.3
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhH-HHh-------c----CceecCCHHhhcCcCCEEEEcC--
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQL-EKE-------T----GAKFEEDLDTMLPKCDIVVVNT-- 181 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~-~~~-------~----g~~~~~~l~ell~~aDvVi~~~-- 181 (304)
.++|+|||.|.+|..+|..|...|+ +|..||++....+. ... . .+....++++.+++||+|+++.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g~ 88 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGL 88 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccCC
Confidence 3689999999999999999987787 89999997643332 110 1 1233468888899999999998
Q ss_pred CCChhh------hcc-------ccHHH---HhcCCCCCEEEEcCCCchhch
Q 021995 182 PLTEKT------RGM-------FDKDR---IAKMKKGVLIVNNARGAIMDT 216 (304)
Q Consensus 182 p~~~~t------~~~-------i~~~~---l~~mk~g~ilVn~~rg~~vd~ 216 (304)
|..+.. +-. +-.+. +....|++++|+.+-..-+..
T Consensus 89 p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~~t 139 (331)
T 1pzg_A 89 TKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCMV 139 (331)
T ss_dssp SSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHH
T ss_pred CCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHHHH
Confidence 643321 110 01122 223358999999876544433
No 210
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=97.74 E-value=0.00011 Score=69.38 Aligned_cols=137 Identities=18% Similarity=0.152 Sum_probs=97.3
Q ss_pred CCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCC
Q 021995 61 AGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFN 140 (304)
Q Consensus 61 ~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G 140 (304)
.+|+|.|. . -.-+|--+++.+++.+|- .+..+...+|.|+|.|..|..+|+.+..+|
T Consensus 155 ~~ipvf~D-D--iqGTa~V~lAall~al~l--------------------~g~~l~d~kVVi~GAGaAG~~iA~ll~~~G 211 (398)
T 2a9f_A 155 CHIPVFHD-D--QHGTAIVVLAAIFNSLKL--------------------LKKSLDEVSIVVNGGGSAGLSITRKLLAAG 211 (398)
T ss_dssp CSSCEEEH-H--HHHHHHHHHHHHHHHHHT--------------------TTCCTTSCEEEEECCSHHHHHHHHHHHHHT
T ss_pred CCcceecc-h--hhhHHHHHHHHHHHHHHH--------------------hCCCCCccEEEEECCCHHHHHHHHHHHHcC
Confidence 36899883 1 234555667777777761 244688999999999999999999999999
Q ss_pred C-eEEEEcCCC-C-----------ChhHHHhcC-ceecCCHHhhcCcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEE
Q 021995 141 C-NLLYHDRVK-M-----------DPQLEKETG-AKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIV 206 (304)
Q Consensus 141 ~-~V~~~dr~~-~-----------~~~~~~~~g-~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilV 206 (304)
. +|+.+|++. . +...+.... .....+|+|.++.+|+++=+. ..+++.++.++.|+++++++
T Consensus 212 a~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~IG~S-----apgl~T~EmVk~Ma~~pIIf 286 (398)
T 2a9f_A 212 ATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIFIGVS-----APGVLKAEWISKMAARPVIF 286 (398)
T ss_dssp CCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSEEECC-----STTCCCHHHHHTSCSSCEEE
T ss_pred CCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEEEecC-----CCCCCCHHHHHhhCCCCEEE
Confidence 9 899999863 1 011111111 111346999999999987553 24899999999999999999
Q ss_pred EcCCCchhchHHHHHHHHcCC
Q 021995 207 NNARGAIMDTQAVVDACSSGH 227 (304)
Q Consensus 207 n~~rg~~vd~~aL~~aL~~g~ 227 (304)
.+|+... |-.=.++.+.|.
T Consensus 287 alsNPt~--E~~pe~a~~~g~ 305 (398)
T 2a9f_A 287 AMANPIP--EIYPDEALEAGA 305 (398)
T ss_dssp ECCSSSC--SSCHHHHHTTTC
T ss_pred ECCCCCc--cCCHHHHHHhCC
Confidence 9999764 333333444455
No 211
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.74 E-value=5.8e-05 Score=69.41 Aligned_cols=112 Identities=18% Similarity=0.232 Sum_probs=68.0
Q ss_pred CEEEEEeeChhhHHHHHHhccCCC--eEEEEcCCCCChhHHH-hc--------Cce-ecCCHHhhcCcCCEEEEcCCCCh
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQLEK-ET--------GAK-FEEDLDTMLPKCDIVVVNTPLTE 185 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~--~V~~~dr~~~~~~~~~-~~--------g~~-~~~~l~ell~~aDvVi~~~p~~~ 185 (304)
++|+|||.|.||..++..|...|+ +|.++|+++...+... .. ... ...+ .+.+++||+|++++|...
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCCC
Confidence 479999999999999999988888 9999999753222211 11 111 1134 356789999999998543
Q ss_pred hh---h--------ccccHHHHhcC---CCCCEEEEcCCCchhchHHHHHHH--HcCCceEE
Q 021995 186 KT---R--------GMFDKDRIAKM---KKGVLIVNNARGAIMDTQAVVDAC--SSGHIAGY 231 (304)
Q Consensus 186 ~t---~--------~~i~~~~l~~m---k~g~ilVn~~rg~~vd~~aL~~aL--~~g~i~ga 231 (304)
.. + .++ .+.++.+ .+++++|+++.+.-+....+.+.. ...++.|.
T Consensus 80 ~~g~~r~dl~~~n~~i~-~~i~~~i~~~~~~~~ii~~tNp~~~~~~~~~~~~~~~~~rviG~ 140 (319)
T 1a5z_A 80 KPGETRLQLLGRNARVM-KEIARNVSKYAPDSIVIVVTNPVDVLTYFFLKESGMDPRKVFGS 140 (319)
T ss_dssp CSSCCHHHHHHHHHHHH-HHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred CCCCCHHHHHHHHHHHH-HHHHHHHHhhCCCeEEEEeCCcHHHHHHHHHHHhCCChhhEEee
Confidence 10 0 011 2332222 578899998765544333333322 34455544
No 212
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.72 E-value=0.00012 Score=67.31 Aligned_cols=107 Identities=8% Similarity=0.084 Sum_probs=69.0
Q ss_pred CEEEEEeeChhhH-HHHHHhccCCCeE-EEEcCCCCChhH-HHhc-CceecCCHHhhcC--cCCEEEEcCCCChhhhccc
Q 021995 118 KTVGTVGCGRIGK-LLLQRLKPFNCNL-LYHDRVKMDPQL-EKET-GAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMF 191 (304)
Q Consensus 118 ~~vgIIG~G~IG~-~lA~~l~~~G~~V-~~~dr~~~~~~~-~~~~-g~~~~~~l~ell~--~aDvVi~~~p~~~~t~~~i 191 (304)
.+|||||+|.+|. .+++.++..|+++ .++|+++...+. ++.+ +...+.+++++++ +.|+|++++|.....
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~---- 80 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDRA---- 80 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGHH----
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhHH----
Confidence 5899999999996 6777776668885 588988755443 4445 4566789999997 689999999954321
Q ss_pred cHHHHhcCCCCC-EEEEc-CCCchhchHHHHHHHHcCCce
Q 021995 192 DKDRIAKMKKGV-LIVNN-ARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 192 ~~~~l~~mk~g~-ilVn~-~rg~~vd~~aL~~aL~~g~i~ 229 (304)
+...+.++.|. +++.- .--.+-+.++|.++.++..+.
T Consensus 81 -~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~ 119 (336)
T 2p2s_A 81 -ELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGRK 119 (336)
T ss_dssp -HHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCCC
T ss_pred -HHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCE
Confidence 22333445554 44432 122334455566665554443
No 213
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.70 E-value=5.7e-05 Score=69.82 Aligned_cols=68 Identities=22% Similarity=0.313 Sum_probs=52.9
Q ss_pred CEEEEEeeChhhHHHHHHhc-c-CCCeEE-EEcCCCCChh-HHHhcC--ceecCCHHhhcCc--CCEEEEcCCCCh
Q 021995 118 KTVGTVGCGRIGKLLLQRLK-P-FNCNLL-YHDRVKMDPQ-LEKETG--AKFEEDLDTMLPK--CDIVVVNTPLTE 185 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~-~-~G~~V~-~~dr~~~~~~-~~~~~g--~~~~~~l~ell~~--aDvVi~~~p~~~ 185 (304)
.+|||||+|.||+..++.+. . -+++++ ++|+++...+ .++++| ...++++++++++ .|+|++++|...
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 78 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPA 78 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchh
Confidence 48999999999999999887 5 478866 7788754333 344567 5677899999876 999999999543
No 214
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.69 E-value=0.00012 Score=67.66 Aligned_cols=112 Identities=14% Similarity=0.227 Sum_probs=68.9
Q ss_pred CEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHHH-h-------c----CceecCCHHhhcCcCCEEEEcC--C
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEK-E-------T----GAKFEEDLDTMLPKCDIVVVNT--P 182 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~~-~-------~----g~~~~~~l~ell~~aDvVi~~~--p 182 (304)
++|+|||.|.+|..+|..+...|+ +|..||++....+... . . .+....++ +.+++||+|++++ |
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg~p 93 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAGVP 93 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 699999999999999999988888 9999999764333211 0 0 12333567 7789999999998 4
Q ss_pred CChh---------hhccccHHH---HhcCCCCCEEEEcCCCchhchHHHHHHH--HcCCceEE
Q 021995 183 LTEK---------TRGMFDKDR---IAKMKKGVLIVNNARGAIMDTQAVVDAC--SSGHIAGY 231 (304)
Q Consensus 183 ~~~~---------t~~~i~~~~---l~~mk~g~ilVn~~rg~~vd~~aL~~aL--~~g~i~ga 231 (304)
..+. +..++ .+. +....|++++|+++...-+....+.+.- ...++.|.
T Consensus 94 ~k~g~tr~dl~~~n~~i~-~~i~~~i~~~~p~a~viv~tNP~~~~t~~~~~~~~~~~~rviG~ 155 (328)
T 2hjr_A 94 RKPNMTRSDLLTVNAKIV-GSVAENVGKYCPNAFVICITNPLDAMVYYFKEKSGIPANKVCGM 155 (328)
T ss_dssp CCTTCCSGGGHHHHHHHH-HHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEES
T ss_pred CCCCCchhhHHhhhHHHH-HHHHHHHHHHCCCeEEEEecCchHHHHHHHHHhcCCChhhEEEe
Confidence 3221 11111 122 2223488999988664333322222221 24455555
No 215
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.69 E-value=0.0001 Score=68.16 Aligned_cols=68 Identities=21% Similarity=0.202 Sum_probs=50.4
Q ss_pred CEEEEEeeChhhHH-HHH-Hhc-cCCCeEE-EEcCCCCChhHHHhc-CceecCCHHhhcCc--CCEEEEcCCCCh
Q 021995 118 KTVGTVGCGRIGKL-LLQ-RLK-PFNCNLL-YHDRVKMDPQLEKET-GAKFEEDLDTMLPK--CDIVVVNTPLTE 185 (304)
Q Consensus 118 ~~vgIIG~G~IG~~-lA~-~l~-~~G~~V~-~~dr~~~~~~~~~~~-g~~~~~~l~ell~~--aDvVi~~~p~~~ 185 (304)
.+|||||+|.||+. .+. .+. .-+++++ ++|+++...+...+. ++..+.++++++.. .|+|++++|...
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 77 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADS 77 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGG
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHH
Confidence 47999999999996 555 434 3478876 888876544443333 56677899999986 899999999553
No 216
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=97.68 E-value=8.8e-05 Score=67.51 Aligned_cols=80 Identities=21% Similarity=0.325 Sum_probs=65.7
Q ss_pred cccccCCCEEEEEeeCh-hhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhc
Q 021995 111 RAYDLEGKTVGTVGCGR-IGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRG 189 (304)
Q Consensus 111 ~~~~L~g~~vgIIG~G~-IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~ 189 (304)
.+.++.||++.|||-++ +|+.+|..|...|+.|+.+.... .++.+.+++||+|+.++.- .+
T Consensus 173 ~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T--------------~dl~~~~~~ADIvV~A~G~----p~ 234 (303)
T 4b4u_A 173 NNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRT--------------QNLPELVKQADIIVGAVGK----AE 234 (303)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SSHHHHHHTCSEEEECSCS----TT
T ss_pred HCCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCC--------------CCHHHHhhcCCeEEeccCC----CC
Confidence 35588999999999876 79999999999999999886522 3788999999999999863 25
Q ss_pred cccHHHHhcCCCCCEEEEcCCC
Q 021995 190 MFDKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 190 ~i~~~~l~~mk~g~ilVn~~rg 211 (304)
++..+ ..|+|+++||+|--
T Consensus 235 ~i~~d---~vk~GavVIDVGin 253 (303)
T 4b4u_A 235 LIQKD---WIKQGAVVVDAGFH 253 (303)
T ss_dssp CBCGG---GSCTTCEEEECCCB
T ss_pred ccccc---cccCCCEEEEecee
Confidence 66655 46999999999853
No 217
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.68 E-value=8.1e-05 Score=69.35 Aligned_cols=70 Identities=23% Similarity=0.275 Sum_probs=54.7
Q ss_pred CCCEEEEEeeChhhHHHHHHhc-c-CCCeEE-EEcCCCCChh-HHHhcC--ceecCCHHhhcC--cCCEEEEcCCCCh
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLK-P-FNCNLL-YHDRVKMDPQ-LEKETG--AKFEEDLDTMLP--KCDIVVVNTPLTE 185 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~-~-~G~~V~-~~dr~~~~~~-~~~~~g--~~~~~~l~ell~--~aDvVi~~~p~~~ 185 (304)
.-.+|||||+|.||+..++.+. . -+++++ ++|+++...+ .++++| ...+.++++++. +.|+|++++|...
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 99 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEA 99 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHH
Confidence 3458999999999999999887 4 478866 7898775443 344566 567789999987 4899999999653
No 218
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.67 E-value=6e-05 Score=68.86 Aligned_cols=101 Identities=19% Similarity=0.301 Sum_probs=63.2
Q ss_pred CEEEEEeeChhhHHHHHHhcc-CCCeEE-EEcCCCCChhHHHhcCce--ecCCHHhhcCcCCEEEEcCCCChhhhccccH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKP-FNCNLL-YHDRVKMDPQLEKETGAK--FEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 193 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~-~G~~V~-~~dr~~~~~~~~~~~g~~--~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~ 193 (304)
.+|||||+|+||+.+++.++. -++++. ++|+++...+. .|+. .++++.+. .++|+|++|+|..... +
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~---~g~~~~~~~~l~~~-~~~DvViiatp~~~h~-----~ 80 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF---ELQPFRVVSDIEQL-ESVDVALVCSPSREVE-----R 80 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------CCTTSCEESSGGGS-SSCCEEEECSCHHHHH-----H
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH---cCCCcCCHHHHHhC-CCCCEEEECCCchhhH-----H
Confidence 589999999999999999875 478876 68887643322 4543 24566555 7899999999843221 2
Q ss_pred HHHhcCCCCCEEEEcCC--C-chhchHHHHHHHHcCC
Q 021995 194 DRIAKMKKGVLIVNNAR--G-AIMDTQAVVDACSSGH 227 (304)
Q Consensus 194 ~~l~~mk~g~ilVn~~r--g-~~vd~~aL~~aL~~g~ 227 (304)
...+.++.|.-+++..- + .+.+...|.++.++..
T Consensus 81 ~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g 117 (304)
T 3bio_A 81 TALEILKKGICTADSFDIHDGILALRRSLGDAAGKSG 117 (304)
T ss_dssp HHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCC
Confidence 33345566777776532 2 2334455666666544
No 219
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.66 E-value=0.00017 Score=66.02 Aligned_cols=65 Identities=23% Similarity=0.304 Sum_probs=48.3
Q ss_pred CEEEEEeeChhhHHHHHHhcc--CCCeEEEEcCCCCChhHHH---hc-------C--ceecCCHHhhcCcCCEEEEcCCC
Q 021995 118 KTVGTVGCGRIGKLLLQRLKP--FNCNLLYHDRVKMDPQLEK---ET-------G--AKFEEDLDTMLPKCDIVVVNTPL 183 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~--~G~~V~~~dr~~~~~~~~~---~~-------g--~~~~~~l~ell~~aDvVi~~~p~ 183 (304)
++|+|||.|.+|..+|..|.. +|.+|..+|+++...+... .. . +....++++ +++||+|++++|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 479999999999999999875 5899999999764333211 11 1 223356766 8999999999974
No 220
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.66 E-value=5.2e-05 Score=65.42 Aligned_cols=91 Identities=18% Similarity=0.099 Sum_probs=59.6
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHH-HhcCceec----C---CHHhh-cCcCCEEEEcCCCChhhh
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLE-KETGAKFE----E---DLDTM-LPKCDIVVVNTPLTEKTR 188 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~~~----~---~l~el-l~~aDvVi~~~p~~~~t~ 188 (304)
++|.|+|+|.+|+.+++.|...|++|+++|+++...+.. ...+.... . .++++ +.++|+|+++++....+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n- 79 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVN- 79 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHH-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHH-
Confidence 479999999999999999999999999999876443332 23343221 1 23343 78899999999865443
Q ss_pred ccccHHHHhcCCCCCEEEEcCC
Q 021995 189 GMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn~~r 210 (304)
.+-......+.+...+|-..+
T Consensus 80 -~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 80 -LFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp -HHHHHHHHHTSCCCEEEECCC
T ss_pred -HHHHHHHHHHcCCCeEEEEEe
Confidence 222344444434444554433
No 221
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=97.64 E-value=0.00032 Score=67.29 Aligned_cols=111 Identities=16% Similarity=0.235 Sum_probs=73.5
Q ss_pred ccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEE--------cCCCCChhH------------------HHhcCceecC
Q 021995 112 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYH--------DRVKMDPQL------------------EKETGAKFEE 165 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~--------dr~~~~~~~------------------~~~~g~~~~~ 165 (304)
+.+|.|+||.|-|+|++|..+|++|...|++|++. |+.....+. ..+.+....+
T Consensus 230 ~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~ 309 (450)
T 4fcc_A 230 GMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYLE 309 (450)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEE
T ss_pred CCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEec
Confidence 44789999999999999999999999999998754 333322221 1122333332
Q ss_pred CHHhhcCcCCEEEEcCCCChhhhccccHHHHhcCCCC--CEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 166 DLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKG--VLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 166 ~l~ell~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g--~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
.-+=+-..||+++-|. +.+.|+.+..+.++.+ .++++.+.+++-.+ + .+.|.+..|.
T Consensus 310 ~~~i~~~~~DI~iPcA-----l~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~e-A-~~iL~~rGIl 368 (450)
T 4fcc_A 310 GQQPWSVPVDIALPCA-----TQNELDVDAAHQLIANGVKAVAEGANMPTTIE-A-TELFQQAGVL 368 (450)
T ss_dssp TCCGGGSCCSEEEECS-----CTTCBCHHHHHHHHHTTCCEEECCSSSCBCHH-H-HHHHHHTTCE
T ss_pred CcccccCCccEEeecc-----ccccccHHHHHHHHhcCceEEecCCCCCCCHH-H-HHHHHHCCCE
Confidence 1111234799998876 3467888888888643 57777777775333 2 3566666665
No 222
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.64 E-value=0.00015 Score=67.78 Aligned_cols=105 Identities=12% Similarity=0.221 Sum_probs=65.4
Q ss_pred CEEEEEeeChhhHH-HHHHhccC-CCeEE-EEcCCCCChhHHHhc-CceecCCHHhhcC--cCCEEEEcCCCChhhhccc
Q 021995 118 KTVGTVGCGRIGKL-LLQRLKPF-NCNLL-YHDRVKMDPQLEKET-GAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMF 191 (304)
Q Consensus 118 ~~vgIIG~G~IG~~-lA~~l~~~-G~~V~-~~dr~~~~~~~~~~~-g~~~~~~l~ell~--~aDvVi~~~p~~~~t~~~i 191 (304)
.+|||||+|.||+. .+..++.. +++|+ ++|+++.. ..... +...+.++++++. +.|+|++|+|.....
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~--~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~---- 81 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEK--VKRDLPDVTVIASPEAAVQHPDVDLVVIASPNATHA---- 81 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHH--HHHHCTTSEEESCHHHHHTCTTCSEEEECSCGGGHH----
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH--HHhhCCCCcEECCHHHHhcCCCCCEEEEeCChHHHH----
Confidence 48999999999997 67777655 78865 77876522 22233 5666789999998 789999999954332
Q ss_pred cHHHHhcCCCCCEEEEcC--CCchhchHHHHHHHHcCCce
Q 021995 192 DKDRIAKMKKGVLIVNNA--RGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 192 ~~~~l~~mk~g~ilVn~~--rg~~vd~~aL~~aL~~g~i~ 229 (304)
+-..+.++.|.-++.-- --.+-+.++|.++.++..+.
T Consensus 82 -~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~ 120 (364)
T 3e82_A 82 -PLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQRL 120 (364)
T ss_dssp -HHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred -HHHHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCe
Confidence 22223344444444322 22334445555555554443
No 223
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=97.63 E-value=0.0014 Score=59.85 Aligned_cols=130 Identities=16% Similarity=0.118 Sum_probs=91.8
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEee-ChhhHHHHHH
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGC-GRIGKLLLQR 135 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~-G~IG~~lA~~ 135 (304)
.++-.+|+|.|.-+....++ .+|+-++.+.+++ | .+.|.+|+++|= +++.++++..
T Consensus 117 la~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~--------------------g-~l~gl~ia~vGD~~rva~Sl~~~ 173 (301)
T 2ef0_A 117 LARHAKVPVVNALSDRAHPL--QALADLLTLKEVF--------------------G-GLAGLEVAWVGDGNNVLNSLLEV 173 (301)
T ss_dssp HHHHCSSCEEEEECSSCCHH--HHHHHHHHHHHHH--------------------S-CCTTCEEEEESCCCHHHHHHHHH
T ss_pred HHHHCCCCEEeCCCCccCch--HHHHHHHHHHHHh--------------------C-CcCCcEEEEECCCchhHHHHHHH
Confidence 45567799999766443332 3455555554421 1 488999999996 8899999999
Q ss_pred hccCCCeEEEEcCCCC-Ch-hHHHhcCceecCCHHhhcCcCCEEEEcCCCC-------hh-----hhccccHHHHhcCCC
Q 021995 136 LKPFNCNLLYHDRVKM-DP-QLEKETGAKFEEDLDTMLPKCDIVVVNTPLT-------EK-----TRGMFDKDRIAKMKK 201 (304)
Q Consensus 136 l~~~G~~V~~~dr~~~-~~-~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~-------~~-----t~~~i~~~~l~~mk~ 201 (304)
+..+|++|.+..|... +. +......+....++++.++++|+|....=.. .+ ...-++.+.++.+|+
T Consensus 174 ~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~~~~~~~~~~~y~v~~e~l~~a~~ 253 (301)
T 2ef0_A 174 APLAGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAEREKRLRDFQGFQVNGELLKLLRP 253 (301)
T ss_dssp HHHHTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECCCC--------CHHHHHTTTCCBCHHHHTTSCT
T ss_pred HHHcCCEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCcccchhHHHHHhhccccCHHHHHhcCC
Confidence 9999999999998653 22 2222234666789999999999998743210 01 124578899999999
Q ss_pred CCEEEEcC
Q 021995 202 GVLIVNNA 209 (304)
Q Consensus 202 g~ilVn~~ 209 (304)
+++|..+.
T Consensus 254 ~ai~mHpl 261 (301)
T 2ef0_A 254 EGVFLHCL 261 (301)
T ss_dssp TCEEEECS
T ss_pred CcEEECCC
Confidence 99998886
No 224
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=97.63 E-value=0.00012 Score=70.30 Aligned_cols=111 Identities=17% Similarity=0.151 Sum_probs=80.1
Q ss_pred ccccCCCEEEEEeeChhhHHHHHHhccCCC---eEEEEc----CC--CCChhH---HH----h----cCce-ecCCHHhh
Q 021995 112 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC---NLLYHD----RV--KMDPQL---EK----E----TGAK-FEEDLDTM 170 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~---~V~~~d----r~--~~~~~~---~~----~----~g~~-~~~~l~el 170 (304)
+..+.++++.|+|.|..|+.+++.|...|. +|+++| |+ ..+.+. .. . .+.. ...++.+.
T Consensus 181 g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~ 260 (439)
T 2dvm_A 181 GKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEA 260 (439)
T ss_dssp TCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHH
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHH
Confidence 346889999999999999999999999998 799999 76 211111 11 1 1110 13578899
Q ss_pred cCcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCC
Q 021995 171 LPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGH 227 (304)
Q Consensus 171 l~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~ 227 (304)
++++|+|+.+.|..+ +++.++.++.|+++.++++++... .+.-+.+|.+.|.
T Consensus 261 l~~aDVlInaT~~~~---G~~~~e~v~~m~~~~iVfDLynP~--~t~~~~~A~~~G~ 312 (439)
T 2dvm_A 261 LKDADVLISFTRPGP---GVIKPQWIEKMNEDAIVFPLANPV--PEILPEEAKKAGA 312 (439)
T ss_dssp HTTCSEEEECSCCCS---SSSCHHHHTTSCTTCEEEECCSSS--CSSCHHHHHHHTC
T ss_pred hccCCEEEEcCCCcc---CCCChHHHHhcCCCCEEEECCCCC--CcchHHHHHHcCC
Confidence 999999999988521 355567788899999999995543 4555666666654
No 225
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=97.63 E-value=0.00011 Score=68.05 Aligned_cols=92 Identities=16% Similarity=0.183 Sum_probs=73.9
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-CCHHhhcCcCCEEEEcCCCChhhhccccHH
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-EDLDTMLPKCDIVVVNTPLTEKTRGMFDKD 194 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-~~l~ell~~aDvVi~~~p~~~~t~~~i~~~ 194 (304)
.|++|.|+|.|.+|...++.++.+|++|++.++++.+.+.++++|+... .+.+++.+..|+|+-++..... -..
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~~-----~~~ 250 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHYD-----LKD 250 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCCC-----HHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHHH-----HHH
Confidence 5889999999999999999999999999999998888888888887532 3444444579999988874322 257
Q ss_pred HHhcCCCCCEEEEcCCCc
Q 021995 195 RIAKMKKGVLIVNNARGA 212 (304)
Q Consensus 195 ~l~~mk~g~ilVn~~rg~ 212 (304)
.++.++++..++.++...
T Consensus 251 ~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 251 YLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp HHTTEEEEEEEEECCCCC
T ss_pred HHHHHhcCCEEEEECCCC
Confidence 788899999999997543
No 226
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.63 E-value=0.00018 Score=63.77 Aligned_cols=83 Identities=7% Similarity=0.038 Sum_probs=58.7
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEE-EEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHHHH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRI 196 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~l 196 (304)
.+|+|+|+|+||+.+++.+...+.+++ ++|++.. ...|+..++++++++ ++|+++-+.+. +.+ .+.+
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~-----~~~gv~v~~dl~~l~-~~DVvIDft~p-~a~-----~~~~ 71 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPK-----ATTPYQQYQHIADVK-GADVAIDFSNP-NLL-----FPLL 71 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-------CCSCBCSCTTTCT-TCSEEEECSCH-HHH-----HHHH
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCcc-----ccCCCceeCCHHHHh-CCCEEEEeCCh-HHH-----HHHH
Confidence 589999999999999999986655755 5788653 235676778899988 99998854431 122 2334
Q ss_pred hcCCCCCEEEEcCCCch
Q 021995 197 AKMKKGVLIVNNARGAI 213 (304)
Q Consensus 197 ~~mk~g~ilVn~~rg~~ 213 (304)
. ++.|.-+|....|-.
T Consensus 72 ~-l~~g~~vVigTTG~s 87 (243)
T 3qy9_A 72 D-EDFHLPLVVATTGEK 87 (243)
T ss_dssp T-SCCCCCEEECCCSSH
T ss_pred H-HhcCCceEeCCCCCC
Confidence 4 778877777767743
No 227
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.62 E-value=3.9e-05 Score=73.24 Aligned_cols=92 Identities=16% Similarity=0.209 Sum_probs=65.3
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec----CC---HHhh-cCcCCEEEEcCCCChhhh
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----ED---LDTM-LPKCDIVVVNTPLTEKTR 188 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~----~~---l~el-l~~aDvVi~~~p~~~~t~ 188 (304)
+.+|.|+|+|.+|+.+++.|...|++|+++|+++...+..+..|...+ .+ |+++ +.++|+|+++++..+.+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 457999999999999999999999999999998755555566665321 12 3333 688999999998654433
Q ss_pred ccccHHHHhcCCCCCEEEEcCC
Q 021995 189 GMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn~~r 210 (304)
.+ ....+.+.+...+|--++
T Consensus 84 ~i--~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 84 QL--TEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp HH--HHHHHHHCTTCEEEEEES
T ss_pred HH--HHHHHHhCCCCeEEEEEC
Confidence 33 455566667655554443
No 228
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=97.60 E-value=0.0018 Score=59.30 Aligned_cols=130 Identities=13% Similarity=0.140 Sum_probs=91.1
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEeeC--hhhHHHHH
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCG--RIGKLLLQ 134 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G--~IG~~lA~ 134 (304)
.++-.+++|.|.-+....++ .+|+-++.+.+++ | .+.|.+|+++|=| ++.++++.
T Consensus 111 lA~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~--------------------g-~l~gl~va~vGD~~~rva~Sl~~ 167 (307)
T 2i6u_A 111 MASVATVPVINALSDEFHPC--QVLADLQTIAERK--------------------G-ALRGLRLSYFGDGANNMAHSLLL 167 (307)
T ss_dssp HHHHCSSCEEESCCSSCCHH--HHHHHHHHHHHHH--------------------S-CCTTCEEEEESCTTSHHHHHHHH
T ss_pred HHhhCCCCEEcCCCCCcCcc--HHHHHHHHHHHHh--------------------C-CcCCeEEEEECCCCcCcHHHHHH
Confidence 45567899999765443332 3455555554421 1 4789999999986 99999999
Q ss_pred HhccCCCeEEEEcCCCC-Chh-H---HH----hcC--ceecCCHHhhcCcCCEEEEcCCC-------Chh-----hhccc
Q 021995 135 RLKPFNCNLLYHDRVKM-DPQ-L---EK----ETG--AKFEEDLDTMLPKCDIVVVNTPL-------TEK-----TRGMF 191 (304)
Q Consensus 135 ~l~~~G~~V~~~dr~~~-~~~-~---~~----~~g--~~~~~~l~ell~~aDvVi~~~p~-------~~~-----t~~~i 191 (304)
.+..+|++|.+..|... +.+ . ++ +.| +....++++.++++|+|....=. .++ ...-+
T Consensus 168 ~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v 247 (307)
T 2i6u_A 168 GGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQENDGLDRVKPFRPFQL 247 (307)
T ss_dssp HHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCTTSCCCSSGGGGGGCB
T ss_pred HHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEecceecCCcccchHHHHHHHhhcCC
Confidence 99999999999998653 222 2 11 445 44568999999999999884320 000 12456
Q ss_pred cHHHHhcCCCCCEEEEcC
Q 021995 192 DKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 192 ~~~~l~~mk~g~ilVn~~ 209 (304)
+.+.++.+|++++|..+.
T Consensus 248 ~~~~l~~a~~~ai~mH~l 265 (307)
T 2i6u_A 248 NSRLLALADSDAIVLHCL 265 (307)
T ss_dssp CHHHHHHSCTTCEEEECS
T ss_pred CHHHHhhcCCCcEEECCC
Confidence 888999999999988775
No 229
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.59 E-value=0.00013 Score=66.96 Aligned_cols=73 Identities=18% Similarity=0.175 Sum_probs=53.6
Q ss_pred ccccCCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHH----Hhc----Cc--e--ecCCH---HhhcCcCC
Q 021995 112 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLE----KET----GA--K--FEEDL---DTMLPKCD 175 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~----~~~----g~--~--~~~~l---~ell~~aD 175 (304)
+.++.|+++.|+|.|.+|+.++..|...|+ +|++++|+....+.+ ++. +. . ...++ .+.+.++|
T Consensus 143 ~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~D 222 (312)
T 3t4e_A 143 GFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASAD 222 (312)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCS
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCce
Confidence 446889999999999999999999999998 799999983321211 111 21 1 22343 45678899
Q ss_pred EEEEcCCCC
Q 021995 176 IVVVNTPLT 184 (304)
Q Consensus 176 vVi~~~p~~ 184 (304)
+||.++|..
T Consensus 223 iIINaTp~G 231 (312)
T 3t4e_A 223 ILTNGTKVG 231 (312)
T ss_dssp EEEECSSTT
T ss_pred EEEECCcCC
Confidence 999999964
No 230
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=97.58 E-value=5.9e-05 Score=71.41 Aligned_cols=93 Identities=15% Similarity=0.119 Sum_probs=66.4
Q ss_pred EEEEEeeChhhHHHHHHhccCC--------CeEEEEcCCCCC--hhHHH---h--------------cCceecCCHHhhc
Q 021995 119 TVGTVGCGRIGKLLLQRLKPFN--------CNLLYHDRVKMD--PQLEK---E--------------TGAKFEEDLDTML 171 (304)
Q Consensus 119 ~vgIIG~G~IG~~lA~~l~~~G--------~~V~~~dr~~~~--~~~~~---~--------------~g~~~~~~l~ell 171 (304)
+|+|||.|..|.++|..|...| .+|..|.|.+.. ....+ . .++....++++.+
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~al 115 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSV 115 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHHH
Confidence 8999999999999999997544 459999876431 11111 1 1234457899999
Q ss_pred CcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCch
Q 021995 172 PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAI 213 (304)
Q Consensus 172 ~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~ 213 (304)
+++|+|++++|. ...+.++ ++....++++..+|+++-|=-
T Consensus 116 ~~ad~ii~avPs-~~~r~~l-~~l~~~~~~~~~iv~~~KGie 155 (391)
T 4fgw_A 116 KDVDIIVFNIPH-QFLPRIC-SQLKGHVDSHVRAISCLKGFE 155 (391)
T ss_dssp TTCSEEEECSCG-GGHHHHH-HHHTTTSCTTCEEEECCCSCE
T ss_pred hcCCEEEEECCh-hhhHHHH-HHhccccCCCceeEEeccccc
Confidence 999999999994 2333332 455566789999999998843
No 231
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.58 E-value=0.00019 Score=64.57 Aligned_cols=90 Identities=19% Similarity=0.186 Sum_probs=59.9
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCCh-hHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhh----c
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDP-QLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTR----G 189 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~-~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~----~ 189 (304)
.++++.|+|.|.+|+.++..|...|+ +|++++|+..+. +.+++++.....++. +.++|+|+.++|...... .
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~gm~~~~~~~~ 195 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIGMKGGKEEMD 195 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTTCTTSTTTTS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCCccCccccCC
Confidence 46799999999999999999999998 699999986432 233344443222232 468999999999653211 1
Q ss_pred -cccHHHHhcCCCCCEEEEcCC
Q 021995 190 -MFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 190 -~i~~~~l~~mk~g~ilVn~~r 210 (304)
.+..+. ++++.+++|+.-
T Consensus 196 ~~~~~~~---l~~~~~v~DlvY 214 (271)
T 1npy_A 196 LAFPKAF---IDNASVAFDVVA 214 (271)
T ss_dssp CSSCHHH---HHHCSEEEECCC
T ss_pred CCCCHHH---cCCCCEEEEeec
Confidence 123232 344666666654
No 232
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.57 E-value=0.00015 Score=66.77 Aligned_cols=68 Identities=13% Similarity=0.147 Sum_probs=51.6
Q ss_pred CEEEEEeeChhhHHHHHHhccCC---CeE-EEEcCCCCCh-hHHHhcCc-eecCCHHhhcC--cCCEEEEcCCCCh
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFN---CNL-LYHDRVKMDP-QLEKETGA-KFEEDLDTMLP--KCDIVVVNTPLTE 185 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G---~~V-~~~dr~~~~~-~~~~~~g~-~~~~~l~ell~--~aDvVi~~~p~~~ 185 (304)
.++||||+|.||+..++.++..+ +++ .++|++.... +.++++++ ..+.++++++. +.|+|++++|...
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 78 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQ 78 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGG
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHH
Confidence 48999999999999999988653 464 4678865333 34455676 46789999987 6999999999543
No 233
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=97.57 E-value=6.2e-05 Score=70.26 Aligned_cols=91 Identities=15% Similarity=0.157 Sum_probs=69.5
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHH-hcCceec---CC---HHhhcCcCCEEEEcCCCChhhh
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-ETGAKFE---ED---LDTMLPKCDIVVVNTPLTEKTR 188 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~---~~---l~ell~~aDvVi~~~p~~~~t~ 188 (304)
.|++|.|+|.|.+|..+++.++.+|++|++.+++....+.+. ++|+... .+ +.++....|+|+.++.....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~-- 264 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHP-- 264 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHH--
Confidence 689999999999999999999999999999998765555555 6675422 22 33445578999998874322
Q ss_pred ccccHHHHhcCCCCCEEEEcCCC
Q 021995 189 GMFDKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn~~rg 211 (304)
-...++.|+++..+|+++..
T Consensus 265 ---~~~~~~~l~~~G~iv~~g~~ 284 (366)
T 1yqd_A 265 ---LLPLFGLLKSHGKLILVGAP 284 (366)
T ss_dssp ---SHHHHHHEEEEEEEEECCCC
T ss_pred ---HHHHHHHHhcCCEEEEEccC
Confidence 25677889999999999853
No 234
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.57 E-value=0.00017 Score=67.15 Aligned_cols=107 Identities=18% Similarity=0.317 Sum_probs=71.6
Q ss_pred CEEEEEeeChhhHHHHHHhccC-CCeE-EEEcCCCCChh-HHHhcC----ceecCCHHhhcC--cCCEEEEcCCCChhhh
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF-NCNL-LYHDRVKMDPQ-LEKETG----AKFEEDLDTMLP--KCDIVVVNTPLTEKTR 188 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~-G~~V-~~~dr~~~~~~-~~~~~g----~~~~~~l~ell~--~aDvVi~~~p~~~~t~ 188 (304)
.+|||||+|.||+.+++.+... ++++ .++|+++...+ .++++| ...+.+++++++ +.|+|++++|.....
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~- 85 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLHV- 85 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGGHH-
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHHHH-
Confidence 4899999999999999988764 6775 47888653322 334455 355678999986 599999999954321
Q ss_pred ccccHHHHhcCCCCCEEEEcC--CCchhchHHHHHHHHcCCce
Q 021995 189 GMFDKDRIAKMKKGVLIVNNA--RGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn~~--rg~~vd~~aL~~aL~~g~i~ 229 (304)
+-..+.++.|.-++.-- --.+-+.++|.++.++..+.
T Consensus 86 ----~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~ 124 (362)
T 1ydw_A 86 ----EWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQ 124 (362)
T ss_dssp ----HHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCC
T ss_pred ----HHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCE
Confidence 23334566676444321 23344557788888877665
No 235
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.57 E-value=0.00035 Score=64.69 Aligned_cols=67 Identities=18% Similarity=0.344 Sum_probs=51.1
Q ss_pred CEEEEEeeChhhH-HHHHHhccC-CCeEE-EEcCCCCChhHHHh---cCceecCCHHhhcCc--CCEEEEcCCCCh
Q 021995 118 KTVGTVGCGRIGK-LLLQRLKPF-NCNLL-YHDRVKMDPQLEKE---TGAKFEEDLDTMLPK--CDIVVVNTPLTE 185 (304)
Q Consensus 118 ~~vgIIG~G~IG~-~lA~~l~~~-G~~V~-~~dr~~~~~~~~~~---~g~~~~~~l~ell~~--aDvVi~~~p~~~ 185 (304)
.+|||||+|.||+ ..+..++.. +++|+ ++|++ .....+++ .++..+.++++++.. .|+|++++|...
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 77 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAHT 77 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGGG
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcHH
Confidence 3899999999998 577777655 78865 77876 44444444 366777899999986 899999999643
No 236
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.54 E-value=9.8e-05 Score=64.32 Aligned_cols=89 Identities=17% Similarity=0.246 Sum_probs=59.8
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec----C---CHHhh-cCcCCEEEEcCCCChhh
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----E---DLDTM-LPKCDIVVVNTPLTEKT 187 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~----~---~l~el-l~~aDvVi~~~p~~~~t 187 (304)
..+++.|+|+|.+|+.+++.|...|+ |+++++++...+... .++... . .++++ +.++|.|++++|..+.+
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n 85 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSET 85 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHH
Confidence 34589999999999999999999999 999998764433333 443321 1 23333 78999999999865433
Q ss_pred hccccHHHHhcCCCC-CEEEEc
Q 021995 188 RGMFDKDRIAKMKKG-VLIVNN 208 (304)
Q Consensus 188 ~~~i~~~~l~~mk~g-~ilVn~ 208 (304)
+.-....+.+.++ .+++.+
T Consensus 86 --~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 86 --IHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp --HHHHHHHHHHCSSSEEEEEC
T ss_pred --HHHHHHHHHHCCCCeEEEEE
Confidence 3334555666776 444444
No 237
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.53 E-value=0.0013 Score=60.21 Aligned_cols=130 Identities=15% Similarity=0.139 Sum_probs=88.3
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEee-ChhhHHHHHH
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGC-GRIGKLLLQR 135 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~-G~IG~~lA~~ 135 (304)
.++..+|+|.|.-+....++ .+|+-++.+.++. | .+.|.+|+++|= +++.++++..
T Consensus 117 lA~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~--------------------g-~l~glkva~vGD~~~va~Sl~~~ 173 (309)
T 4f2g_A 117 FAENSRVPVINGLTNEYHPC--QVLADIFTYYEHR--------------------G-PIRGKTVAWVGDANNMLYTWIQA 173 (309)
T ss_dssp HHHTCSSCEEEEECSSCCHH--HHHHHHHHHHHHH--------------------S-CCTTCEEEEESCCCHHHHHHHHH
T ss_pred HHHhCCCCEEECCCCccCcH--HHHHHHHHHHHHh--------------------C-CCCCCEEEEECCCcchHHHHHHH
Confidence 34567899999876544332 2344444444321 1 478999999994 6789999999
Q ss_pred hccCCCeEEEEcCCCC-Chh-H-HHhc--CceecCCHHhhcCcCCEEEEcC----CC---Ch-----hhhccccHHHHhc
Q 021995 136 LKPFNCNLLYHDRVKM-DPQ-L-EKET--GAKFEEDLDTMLPKCDIVVVNT----PL---TE-----KTRGMFDKDRIAK 198 (304)
Q Consensus 136 l~~~G~~V~~~dr~~~-~~~-~-~~~~--g~~~~~~l~ell~~aDvVi~~~----p~---~~-----~t~~~i~~~~l~~ 198 (304)
+..+|++|.+..|... +.+ . +++. ++....++++.++++|+|..-. .. .+ -...-++.+.++.
T Consensus 174 ~~~~G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~r~~~~~~y~v~~~~l~~ 253 (309)
T 4f2g_A 174 ARILDFKLQLSTPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGFEAENEARKRAFADWCVDEEMMSH 253 (309)
T ss_dssp HHHHTCEEEEECCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC------------CCSGGGGCBCHHHHTT
T ss_pred HHHcCCEEEEECCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcchhhHHHHHHHhcCceeCHHHHHh
Confidence 9999999999987542 222 1 1122 3445679999999999998754 11 00 1124578999999
Q ss_pred CCCCCEEEEcC
Q 021995 199 MKKGVLIVNNA 209 (304)
Q Consensus 199 mk~g~ilVn~~ 209 (304)
+|++++|..+.
T Consensus 254 a~~~ai~mH~l 264 (309)
T 4f2g_A 254 ANSDALFMHCL 264 (309)
T ss_dssp SCTTCEEEECS
T ss_pred cCCCeEEECCC
Confidence 99999998875
No 238
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=97.53 E-value=0.00099 Score=61.65 Aligned_cols=131 Identities=14% Similarity=0.110 Sum_probs=91.6
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEeeC--hhhHHHHH
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCG--RIGKLLLQ 134 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G--~IG~~lA~ 134 (304)
.++-.+|+|.|.-+....++ .+|+-++.+.+++ |..+.|.+|+++|=| +++++++.
T Consensus 117 lA~~s~vPVINa~~~~~HPt--Q~LaDl~Ti~e~~--------------------g~~l~gl~va~vGD~~~~va~Sl~~ 174 (335)
T 1dxh_A 117 LAKFAGVPVFNGLTDEYHPT--QMLADVLTMREHS--------------------DKPLHDISYAYLGDARNNMGNSLLL 174 (335)
T ss_dssp HHHHSSSCEEEEECSSCCHH--HHHHHHHHHHHTC--------------------SSCGGGCEEEEESCCSSHHHHHHHH
T ss_pred HHHhCCCCEEcCCCCCCCcH--HHHHHHHHHHHHc--------------------CCCcCCeEEEEecCCccchHHHHHH
Confidence 45566899999765433332 3455556555532 214789999999986 99999999
Q ss_pred HhccCCCeEEEEcCCCC-Chh-H---HH----hcC--ceecCCHHhhcCcCCEEEEcCCC--C------hh-----hhcc
Q 021995 135 RLKPFNCNLLYHDRVKM-DPQ-L---EK----ETG--AKFEEDLDTMLPKCDIVVVNTPL--T------EK-----TRGM 190 (304)
Q Consensus 135 ~l~~~G~~V~~~dr~~~-~~~-~---~~----~~g--~~~~~~l~ell~~aDvVi~~~p~--~------~~-----t~~~ 190 (304)
.+..+|++|.+..|... +.+ . ++ +.| +....++++.++++|+|....=. . .+ ...-
T Consensus 175 ~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~e~~~er~~~~~~y~ 254 (335)
T 1dxh_A 175 IGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPYQ 254 (335)
T ss_dssp HHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCSCSSSCGGGCHHHHHHHGGGC
T ss_pred HHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeCCccccCccchhhHHHHHHhhcce
Confidence 99999999999988642 222 2 11 445 44568999999999999874321 0 11 1245
Q ss_pred ccHHHHhcC-CCCCEEEEcC
Q 021995 191 FDKDRIAKM-KKGVLIVNNA 209 (304)
Q Consensus 191 i~~~~l~~m-k~g~ilVn~~ 209 (304)
++.+.++.+ |++++|..+.
T Consensus 255 v~~~ll~~a~~~~ai~mHcL 274 (335)
T 1dxh_A 255 VNMEIMKATGNPRAKFMHCL 274 (335)
T ss_dssp BCHHHHHTTCCSSCEEEECS
T ss_pred eCHHHHHhccCCCeEEECCC
Confidence 788999999 9999998875
No 239
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=97.53 E-value=0.00017 Score=66.70 Aligned_cols=90 Identities=17% Similarity=0.212 Sum_probs=66.9
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHHHhcCceec-----CCHHhhc------CcCCEEEEcCCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-----EDLDTML------PKCDIVVVNTPL 183 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell------~~aDvVi~~~p~ 183 (304)
.|++|.|+|.|.+|..+++.++.+|+ +|++.++++.+.+.++++|+... .++.+.+ ...|+|+.++..
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 78999999999999999999999999 89999987666666777775421 1232222 258999888874
Q ss_pred ChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 184 TEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
.+. -.+.++.|+++..+|.++.
T Consensus 247 ~~~-----~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 247 PKA-----LEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp HHH-----HHHHHHHEEEEEEEEECCC
T ss_pred HHH-----HHHHHHHHhcCCEEEEEcc
Confidence 222 1466777888888888863
No 240
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=97.51 E-value=0.0017 Score=59.18 Aligned_cols=130 Identities=18% Similarity=0.233 Sum_probs=91.0
Q ss_pred HHHhCCcEEEEc-CCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEee---ChhhHHH
Q 021995 57 AAAAAGLTVAEV-TGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGC---GRIGKLL 132 (304)
Q Consensus 57 ~~~~~gI~v~n~-~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~---G~IG~~l 132 (304)
.++-.+|+|.|. -|....++ .+|+-++.+.+++ | .+.|.+|+++|= |++.+++
T Consensus 111 la~~~~vPVINaG~g~~~HPt--Q~LaDl~Ti~e~~--------------------g-~l~gl~va~vGD~~~~rva~Sl 167 (299)
T 1pg5_A 111 ASEISDIPVINAGDGKHEHPT--QAVIDIYTINKHF--------------------N-TIDGLVFALLGDLKYARTVNSL 167 (299)
T ss_dssp HHHHCSSCEEEEEETTTBCHH--HHHHHHHHHHHHH--------------------S-CSTTCEEEEEECCSSCHHHHHH
T ss_pred HHHhCCCCEEeCCCCCCcCcH--HHHHHHHHHHHHh--------------------C-CcCCcEEEEECCCCCCchHHHH
Confidence 455677999998 54443332 2344445554421 1 478999999997 5999999
Q ss_pred HHHhccC-CCeEEEEcCCCC-Ch-hHHHhcCc--eecCCHHhhcCcCCEEEEcCCCCh------hh-----hccccHHHH
Q 021995 133 LQRLKPF-NCNLLYHDRVKM-DP-QLEKETGA--KFEEDLDTMLPKCDIVVVNTPLTE------KT-----RGMFDKDRI 196 (304)
Q Consensus 133 A~~l~~~-G~~V~~~dr~~~-~~-~~~~~~g~--~~~~~l~ell~~aDvVi~~~p~~~------~t-----~~~i~~~~l 196 (304)
+..+..+ |++|.+..|... +. ...++.|. ....++++.++++|+|....-..+ +. ..-++.+.+
T Consensus 168 ~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l 247 (299)
T 1pg5_A 168 LRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKERFVDEMEYEKIKGSYIVSLDLA 247 (299)
T ss_dssp HHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCSTTSSCHHHHHHHGGGGSBCHHHH
T ss_pred HHHHHhCCCCEEEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCcccccccCHHHHHHhhcCcccCHHHH
Confidence 9999999 999999988642 22 22334454 345789999999999987654321 11 245688899
Q ss_pred hcCCCCCEEEEcC
Q 021995 197 AKMKKGVLIVNNA 209 (304)
Q Consensus 197 ~~mk~g~ilVn~~ 209 (304)
+.+|++++|..+.
T Consensus 248 ~~a~~~ai~mH~l 260 (299)
T 1pg5_A 248 NKMKKDSIILHPL 260 (299)
T ss_dssp HTSCTTCEEECCS
T ss_pred HhcCCCCEEECCC
Confidence 9999999988775
No 241
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.50 E-value=0.00015 Score=66.17 Aligned_cols=112 Identities=16% Similarity=0.257 Sum_probs=68.3
Q ss_pred CEEEEEeeChhhHHHHHHhccCCC--eEEEEcCCCCChh-HHHhcC--------cee-cCCHHhhcCcCCEEEEcCCCCh
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-LEKETG--------AKF-EEDLDTMLPKCDIVVVNTPLTE 185 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~--~V~~~dr~~~~~~-~~~~~g--------~~~-~~~l~ell~~aDvVi~~~p~~~ 185 (304)
++|+|||.|.+|..+|..|...|+ +|..+|++....+ ...+.. ... ..+ .+.+++||+|+++.+...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~-~~a~~~aDvVIi~~~~~~ 79 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGG-HSELADAQVVILTAGANQ 79 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEEC-GGGGTTCSEEEECC----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECC-HHHhCCCCEEEEcCCCCC
Confidence 489999999999999999988888 9999998653221 111111 111 123 356899999999995322
Q ss_pred h-----------hhccccH---HHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEE
Q 021995 186 K-----------TRGMFDK---DRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGY 231 (304)
Q Consensus 186 ~-----------t~~~i~~---~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga 231 (304)
. +-.++ + +.+....+++++|+++.+.-+....+.+.....++.|.
T Consensus 80 ~~g~~r~dl~~~n~~i~-~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 80 KPGESRLDLLEKNADIF-RELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp --------CHHHHHHHH-HHHHHHHHHHCSSSEEEECSSSHHHHHHHHHHHSCSSCEEEC
T ss_pred CCCCcHHHHHHhHHHHH-HHHHHHHHHhCCCeEEEEecCchHHHHHHHHHhCChhcEEeC
Confidence 1 11111 1 22233368999999876655545555555545555544
No 242
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=97.48 E-value=0.0035 Score=57.52 Aligned_cols=130 Identities=13% Similarity=0.138 Sum_probs=90.9
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEee-ChhhHHHHHH
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGC-GRIGKLLLQR 135 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~-G~IG~~lA~~ 135 (304)
.++-.+|+|.|.-+....++ .+|+-++.+.+++ | .+.|.+|+++|= +++.++++..
T Consensus 118 lA~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~--------------------g-~l~gl~va~vGD~~rva~Sl~~~ 174 (315)
T 1pvv_A 118 LAKYATVPVINGLSDFSHPC--QALADYMTIWEKK--------------------G-TIKGVKVVYVGDGNNVAHSLMIA 174 (315)
T ss_dssp HHHHCSSCEEEEECSSCCHH--HHHHHHHHHHHHH--------------------S-CCTTCEEEEESCCCHHHHHHHHH
T ss_pred HHHhCCCCEEcCCCCCCCcH--HHHHHHHHHHHHh--------------------C-CcCCcEEEEECCCcchHHHHHHH
Confidence 45566799999755433332 3455555554421 1 478999999996 8899999999
Q ss_pred hccCCCeEEEEcCCCC-Chh-H---HH----hcC--ceecCCHHhhcCcCCEEEEcCCC-------Chh-----hhcccc
Q 021995 136 LKPFNCNLLYHDRVKM-DPQ-L---EK----ETG--AKFEEDLDTMLPKCDIVVVNTPL-------TEK-----TRGMFD 192 (304)
Q Consensus 136 l~~~G~~V~~~dr~~~-~~~-~---~~----~~g--~~~~~~l~ell~~aDvVi~~~p~-------~~~-----t~~~i~ 192 (304)
+..+|++|.+..|... +.+ . ++ +.| +....++++.++++|+|....=. .++ ...-++
T Consensus 175 ~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~ 254 (315)
T 1pvv_A 175 GTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEAEAEERRKIFRPFQVN 254 (315)
T ss_dssp HHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCCCSSTTSSSSHHHHHHGGGCBC
T ss_pred HHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcceeccCcccchHHHHHHHHhcCCC
Confidence 9999999999998653 222 2 11 445 44568999999999999884421 111 124578
Q ss_pred HHHHhcCCCCCEEEEcC
Q 021995 193 KDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 193 ~~~l~~mk~g~ilVn~~ 209 (304)
.+.++.+|++++|..+.
T Consensus 255 ~ell~~a~~~ai~mH~l 271 (315)
T 1pvv_A 255 KDLVKHAKPDYMFMHCL 271 (315)
T ss_dssp HHHHHTSCTTCEEEECS
T ss_pred HHHHhhcCCCcEEECCC
Confidence 89999999999998775
No 243
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=97.46 E-value=0.00012 Score=70.49 Aligned_cols=106 Identities=15% Similarity=0.181 Sum_probs=68.9
Q ss_pred CCCEEEEEeeChhh--HHHHHHhcc----CCCeEEEEcCCCCChhHHHhc---------CceecCCHHhhcCcCCEEEEc
Q 021995 116 EGKTVGTVGCGRIG--KLLLQRLKP----FNCNLLYHDRVKMDPQLEKET---------GAKFEEDLDTMLPKCDIVVVN 180 (304)
Q Consensus 116 ~g~~vgIIG~G~IG--~~lA~~l~~----~G~~V~~~dr~~~~~~~~~~~---------g~~~~~~l~ell~~aDvVi~~ 180 (304)
..++|+|||.|.+| ..++..+.. .| +|+.||+++...+..... .+....++++++++||+|+.+
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~a 82 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIIS 82 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEec
Confidence 45699999999984 677766642 46 999999965322211111 234557899999999999999
Q ss_pred CCCC-----------hhhhcccc---------------------H---HHHhcCCCCCEEEEcCCCchhchHHHHHH
Q 021995 181 TPLT-----------EKTRGMFD---------------------K---DRIAKMKKGVLIVNNARGAIMDTQAVVDA 222 (304)
Q Consensus 181 ~p~~-----------~~t~~~i~---------------------~---~~l~~mk~g~ilVn~~rg~~vd~~aL~~a 222 (304)
++.. |.-.++.. . +.+....|++++||++..--+-+.++.+.
T Consensus 83 irvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~~k~ 159 (450)
T 3fef_A 83 ILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKV 159 (450)
T ss_dssp CCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHH
T ss_pred cccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHHH
Confidence 9642 22222311 1 12334468999999998765555555443
No 244
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=97.45 E-value=0.0025 Score=59.04 Aligned_cols=130 Identities=12% Similarity=0.156 Sum_probs=88.3
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEee-ChhhHHHHHH
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGC-GRIGKLLLQR 135 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~-G~IG~~lA~~ 135 (304)
.++..+|+|.|.-+....++ .+|+=++.+.+++ | .+.|.+|++||= +++.++++..
T Consensus 142 lA~~~~vPVINag~~~~HPt--QaLaDl~TI~E~~--------------------G-~l~glkva~vGD~~nva~Sl~~~ 198 (340)
T 4ep1_A 142 LAKESSIPVINGLTDDHHPC--QALADLMTIYEET--------------------N-TFKGIKLAYVGDGNNVCHSLLLA 198 (340)
T ss_dssp HHHHCSSCEEEEECSSCCHH--HHHHHHHHHHHHH--------------------S-CCTTCEEEEESCCCHHHHHHHHH
T ss_pred HHHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHh--------------------C-CCCCCEEEEECCCchhHHHHHHH
Confidence 45667899998754332221 2344445554421 1 388999999995 6789999999
Q ss_pred hccCCCeEEEEcCCCC-ChhH--------HHhcC--ceecCCHHhhcCcCCEEEEcCCCCh------h-----hhccccH
Q 021995 136 LKPFNCNLLYHDRVKM-DPQL--------EKETG--AKFEEDLDTMLPKCDIVVVNTPLTE------K-----TRGMFDK 193 (304)
Q Consensus 136 l~~~G~~V~~~dr~~~-~~~~--------~~~~g--~~~~~~l~ell~~aDvVi~~~p~~~------~-----t~~~i~~ 193 (304)
+..+|++|.+..|... +.+. +++.| +....++++.++++|+|....=... + ...-++.
T Consensus 199 ~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~w~smg~e~~~~~~~~~~~y~vt~ 278 (340)
T 4ep1_A 199 SAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVWMSMGQEGEEEKYTLFQPYQINK 278 (340)
T ss_dssp HHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECCC------CHHHHHHHHGGGCBCH
T ss_pred HHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecCccCCCCCchHHHHHHhccccCCH
Confidence 9999999999988642 2221 12445 3456799999999999987542211 0 1235788
Q ss_pred HHHhcCCCCCEEEEcC
Q 021995 194 DRIAKMKKGVLIVNNA 209 (304)
Q Consensus 194 ~~l~~mk~g~ilVn~~ 209 (304)
+.++.+|++++|..+.
T Consensus 279 ell~~ak~dai~MHcL 294 (340)
T 4ep1_A 279 ELVKHAKQTYHFLHCL 294 (340)
T ss_dssp HHHTTSCTTCEEEECS
T ss_pred HHHHhcCCCcEEECCC
Confidence 9999999999998886
No 245
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.45 E-value=0.0005 Score=63.30 Aligned_cols=96 Identities=17% Similarity=0.165 Sum_probs=62.4
Q ss_pred CEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHH----Hh----c--C--ceecCCHHhhcCcCCEEEEcC--C
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLE----KE----T--G--AKFEEDLDTMLPKCDIVVVNT--P 182 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~----~~----~--g--~~~~~~l~ell~~aDvVi~~~--p 182 (304)
++|+|||.|.+|..+|..+...|+ +|..+|.+....+.. .. . . +....++ +.+++||+|+++. |
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g~p 83 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAGFT 83 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCSCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCCC
Confidence 589999999999999999988787 899999876433211 00 1 1 2333567 7789999999998 5
Q ss_pred CChhhh-------cc------ccHHHH---hcCCCCCEEEEcCCCchh
Q 021995 183 LTEKTR-------GM------FDKDRI---AKMKKGVLIVNNARGAIM 214 (304)
Q Consensus 183 ~~~~t~-------~~------i~~~~l---~~mk~g~ilVn~~rg~~v 214 (304)
..+... .+ +-.+.+ ....+++++|+++...-+
T Consensus 84 ~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~ 131 (322)
T 1t2d_A 84 KAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDV 131 (322)
T ss_dssp SCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHH
T ss_pred CCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHH
Confidence 432210 00 112222 223589999998654333
No 246
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.45 E-value=0.00016 Score=67.48 Aligned_cols=87 Identities=22% Similarity=0.218 Sum_probs=57.4
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcC------ceecCCHHhhcCcCCEEEEcCCCChhhhc
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG------AKFEEDLDTMLPKCDIVVVNTPLTEKTRG 189 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g------~~~~~~l~ell~~aDvVi~~~p~~~~t~~ 189 (304)
+.++|+|+|.|.+|+.+++.|.. ..+|.+.|++....+...+.. +...+++.++++++|+|+.++|..-
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~---- 89 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFL---- 89 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGG----
T ss_pred CccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCcc----
Confidence 34589999999999999999976 578999998654333332221 1112356788999999999998542
Q ss_pred cccHHHH-hcCCCCCEEEEcC
Q 021995 190 MFDKDRI-AKMKKGVLIVNNA 209 (304)
Q Consensus 190 ~i~~~~l-~~mk~g~ilVn~~ 209 (304)
+.... ..++.|.-+||++
T Consensus 90 --~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 90 --GFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp --HHHHHHHHHHHTCEEEECC
T ss_pred --cchHHHHHHhcCcceEeee
Confidence 11222 2234566666665
No 247
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.44 E-value=0.00027 Score=65.46 Aligned_cols=67 Identities=16% Similarity=0.165 Sum_probs=49.3
Q ss_pred CEEEEEeeChhhHH-HHHHhccC-CCeEE-EEcCCCCChhHHHhcCceecCCHHhhcCc--CCEEEEcCCCCh
Q 021995 118 KTVGTVGCGRIGKL-LLQRLKPF-NCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLPK--CDIVVVNTPLTE 185 (304)
Q Consensus 118 ~~vgIIG~G~IG~~-lA~~l~~~-G~~V~-~~dr~~~~~~~~~~~g~~~~~~l~ell~~--aDvVi~~~p~~~ 185 (304)
.+|||||+|.||+. .+..++.. +++|+ ++|+++...+ ....+...+.++++++.. .|+|++++|...
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~-~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 79 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH-ADWPAIPVVSDPQMLFNDPSIDLIVIPTPNDT 79 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH-TTCSSCCEESCHHHHHHCSSCCEEEECSCTTT
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH-hhCCCCceECCHHHHhcCCCCCEEEEeCChHH
Confidence 48999999999997 77777655 78865 7787643222 111245667899999875 899999999654
No 248
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=97.44 E-value=0.00014 Score=68.11 Aligned_cols=91 Identities=16% Similarity=0.244 Sum_probs=70.4
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec---CC---HHhhcCcCCEEEEcCCCChhhhc
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE---ED---LDTMLPKCDIVVVNTPLTEKTRG 189 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~---~~---l~ell~~aDvVi~~~p~~~~t~~ 189 (304)
.|.+|.|+|.|.+|...++.++.+|++|++.++++...+.++++|+..+ .+ .+++....|+|+-++.....
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~--- 270 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHN--- 270 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCC---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHHH---
Confidence 5889999999999999999999999999999988777777778886432 12 22334578999988864321
Q ss_pred cccHHHHhcCCCCCEEEEcCCC
Q 021995 190 MFDKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 190 ~i~~~~l~~mk~g~ilVn~~rg 211 (304)
-...++.|+++..+|.++..
T Consensus 271 --~~~~~~~l~~~G~iv~~G~~ 290 (369)
T 1uuf_A 271 --LDDFTTLLKRDGTMTLVGAP 290 (369)
T ss_dssp --HHHHHTTEEEEEEEEECCCC
T ss_pred --HHHHHHHhccCCEEEEeccC
Confidence 25678889999999998753
No 249
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.43 E-value=0.00027 Score=65.84 Aligned_cols=66 Identities=20% Similarity=0.237 Sum_probs=50.6
Q ss_pred CEEEEEeeChhhHH-HHHHhccC-CCeEE-EEcCCCCChhHHHhc-CceecCCHHhhcCc--CCEEEEcCCCCh
Q 021995 118 KTVGTVGCGRIGKL-LLQRLKPF-NCNLL-YHDRVKMDPQLEKET-GAKFEEDLDTMLPK--CDIVVVNTPLTE 185 (304)
Q Consensus 118 ~~vgIIG~G~IG~~-lA~~l~~~-G~~V~-~~dr~~~~~~~~~~~-g~~~~~~l~ell~~--aDvVi~~~p~~~ 185 (304)
.+|||||+|.||+. .+..++.. +++|+ ++|+++.. .++++ +...+.++++++.. .|+|++|+|...
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~--~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 77 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKEL--SKERYPQASIVRSFKELTEDPEIDLIVVNTPDNT 77 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCG--GGTTCTTSEEESCSHHHHTCTTCCEEEECSCGGG
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH--HHHhCCCCceECCHHHHhcCCCCCEEEEeCChHH
Confidence 48999999999997 67777654 78865 77887543 33444 56677899999987 899999999543
No 250
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=97.43 E-value=0.00032 Score=71.62 Aligned_cols=116 Identities=13% Similarity=0.175 Sum_probs=79.9
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHh---------------c-------CceecCCHHhhcCcC
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE---------------T-------GAKFEEDLDTMLPKC 174 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~---------------~-------g~~~~~~l~ell~~a 174 (304)
=++|||||.|.||..+|..+...|++|+.+|+++...+...+ . ......+++ .+++|
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~a 394 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTK-ELSTV 394 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGG-GGGSC
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHH-HHhhC
Confidence 369999999999999999999999999999987532221110 0 012233443 47799
Q ss_pred CEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCceEEEeecC
Q 021995 175 DIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVW 236 (304)
Q Consensus 175 DvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ga~lDV~ 236 (304)
|+|+=++|-+.+.+.-+-+++=+.++++++|-..+++ +....|.+.++ +.-+.+++=-|
T Consensus 395 DlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs--l~i~~ia~~~~-~p~r~ig~HFf 453 (742)
T 3zwc_A 395 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTD-RPQLVIGTHFF 453 (742)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSS-CGGGEEEEECC
T ss_pred CEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCc--CChHHHHhhcC-Ccccccccccc
Confidence 9999999988887776666777778999998665544 44455655542 33343444433
No 251
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=97.42 E-value=0.00036 Score=65.08 Aligned_cols=90 Identities=17% Similarity=0.112 Sum_probs=69.2
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHHHhcCceec-------CCHHhhcC-----cCCEEEEcCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-------EDLDTMLP-----KCDIVVVNTP 182 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~l~ell~-----~aDvVi~~~p 182 (304)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++.+.+.++++|+... .++.+.+. ..|+++-++.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 58899999999999999999999999 79999988777777888886422 12333222 5899999886
Q ss_pred CChhhhccccHHHHhcCCCC-CEEEEcCC
Q 021995 183 LTEKTRGMFDKDRIAKMKKG-VLIVNNAR 210 (304)
Q Consensus 183 ~~~~t~~~i~~~~l~~mk~g-~ilVn~~r 210 (304)
..+. -...++.++++ ..+|.++-
T Consensus 272 ~~~~-----~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 272 NVGV-----MRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECSC
T ss_pred CHHH-----HHHHHHHhhcCCcEEEEEcC
Confidence 4222 15678889999 99998874
No 252
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=97.42 E-value=0.0022 Score=59.42 Aligned_cols=132 Identities=14% Similarity=0.092 Sum_probs=88.0
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEee-ChhhHHHHHH
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGC-GRIGKLLLQR 135 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~-G~IG~~lA~~ 135 (304)
.++-.+|+|.|.-+....++ .+|+=++.+.+++. .|..+.|.+|++||= +++.++++..
T Consensus 135 lA~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~~------------------~G~~l~glkva~vGD~~rva~Sl~~~ 194 (339)
T 4a8t_A 135 LANCATIPVINGMSDYNHPT--QELGDLCTMVEHLP------------------EGKKLEDCKVVFVGDATQVCFSLGLI 194 (339)
T ss_dssp HHHHCSSCEEECCCSSCCHH--HHHHHHHHHHHTCC------------------TTCCGGGCEEEEESSCCHHHHHHHHH
T ss_pred HHHhCCCCEEECCCCCcCcH--HHHHHHHHHHHHhh------------------cCCCCCCCEEEEECCCchhHHHHHHH
Confidence 45667899999865433332 34555555554320 022488999999995 7899999999
Q ss_pred hccCCCeEEEEcCCCC-ChhH--------HHhcC--ceecCCHHhhcCcCCEEEEcC--CC--C----hh----h--hcc
Q 021995 136 LKPFNCNLLYHDRVKM-DPQL--------EKETG--AKFEEDLDTMLPKCDIVVVNT--PL--T----EK----T--RGM 190 (304)
Q Consensus 136 l~~~G~~V~~~dr~~~-~~~~--------~~~~g--~~~~~~l~ell~~aDvVi~~~--p~--~----~~----t--~~~ 190 (304)
+..+|++|.+..|... +.+. +++.| +....+++ .++++|+|..-+ +. . .+ . ..-
T Consensus 195 ~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDvvytd~w~smg~~~~~~~er~~~~~~~y~ 273 (339)
T 4a8t_A 195 TTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQ 273 (339)
T ss_dssp HHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSEEEECCSSCCTTSCCCHHHHHHHHTTTTC
T ss_pred HHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh-HHcCCCEEEecCcccCCchhhhhHHHHHHhccccc
Confidence 9999999999988652 2221 12345 34567899 999999998633 11 0 11 1 144
Q ss_pred ccHHHHhcCCCCCEEEEcC
Q 021995 191 FDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 191 i~~~~l~~mk~g~ilVn~~ 209 (304)
++.+.++.+|++++|..+.
T Consensus 274 vt~ell~~ak~dai~mHcL 292 (339)
T 4a8t_A 274 VNQEMMDRAGANCKFMHCL 292 (339)
T ss_dssp BCHHHHHHHCTTCEEEECS
T ss_pred cCHHHHHhcCCCcEEECCC
Confidence 6788888888888888775
No 253
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.42 E-value=0.00033 Score=65.11 Aligned_cols=66 Identities=18% Similarity=0.294 Sum_probs=50.5
Q ss_pred CEEEEEeeChhhHH-HHHHhccC-CCeEE-EEcCCCCChhHHHhc-CceecCCHHhhcC--cCCEEEEcCCCCh
Q 021995 118 KTVGTVGCGRIGKL-LLQRLKPF-NCNLL-YHDRVKMDPQLEKET-GAKFEEDLDTMLP--KCDIVVVNTPLTE 185 (304)
Q Consensus 118 ~~vgIIG~G~IG~~-lA~~l~~~-G~~V~-~~dr~~~~~~~~~~~-g~~~~~~l~ell~--~aDvVi~~~p~~~ 185 (304)
.+|||||+|.||+. .+..++.. +++|+ ++|+++ ....+.+ +...+.++++++. +.|+|++|+|...
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~--~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 77 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRT--EEVKRDFPDAEVVHELEEITNDPAIELVIVTTPSGL 77 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCH--HHHHHHCTTSEEESSTHHHHTCTTCCEEEECSCTTT
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCH--HHHHhhCCCCceECCHHHHhcCCCCCEEEEcCCcHH
Confidence 48999999999997 67777765 78865 677764 2233444 5667789999998 6899999999654
No 254
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.42 E-value=0.00025 Score=67.88 Aligned_cols=108 Identities=17% Similarity=0.217 Sum_probs=67.7
Q ss_pred CCEEEEEeeChhhH-HHHHHhccC-CCeE-EEEcCCCCChh-HHHhcCce-----ecCCHHhhcC--cCCEEEEcCCCCh
Q 021995 117 GKTVGTVGCGRIGK-LLLQRLKPF-NCNL-LYHDRVKMDPQ-LEKETGAK-----FEEDLDTMLP--KCDIVVVNTPLTE 185 (304)
Q Consensus 117 g~~vgIIG~G~IG~-~lA~~l~~~-G~~V-~~~dr~~~~~~-~~~~~g~~-----~~~~l~ell~--~aDvVi~~~p~~~ 185 (304)
-.+|||||+|.||+ .+++.+... ++++ .++|++....+ .++.+|+. .+.++++++. +.|+|++++|...
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~~~ 162 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSL 162 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGG
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCchh
Confidence 35899999999997 899888765 6775 57888653332 33445653 4678999987 7999999999543
Q ss_pred hhhccccHHHHhcCCCCC-EEEEc-CCCchhchHHHHHHHHcCCce
Q 021995 186 KTRGMFDKDRIAKMKKGV-LIVNN-ARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 186 ~t~~~i~~~~l~~mk~g~-ilVn~-~rg~~vd~~aL~~aL~~g~i~ 229 (304)
.. +-....++.|. +++.- .--.+-+.+.|.++.++..+.
T Consensus 163 h~-----~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~ 203 (433)
T 1h6d_A 163 HA-----EFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKK 203 (433)
T ss_dssp HH-----HHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCC
T ss_pred HH-----HHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCe
Confidence 22 22333455555 34331 112334445566665554433
No 255
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=97.42 E-value=0.00034 Score=65.25 Aligned_cols=90 Identities=17% Similarity=0.076 Sum_probs=69.1
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHHHhcCceec-------CCHHhhc-----CcCCEEEEcCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-------EDLDTML-----PKCDIVVVNTP 182 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~l~ell-----~~aDvVi~~~p 182 (304)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++.+.+.++++|+... .++.+.+ ...|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 58899999999999999999999999 79999988777778888886432 1233322 15899999886
Q ss_pred CChhhhccccHHHHhcCCCC-CEEEEcCC
Q 021995 183 LTEKTRGMFDKDRIAKMKKG-VLIVNNAR 210 (304)
Q Consensus 183 ~~~~t~~~i~~~~l~~mk~g-~ilVn~~r 210 (304)
..+. -...++.++++ ..+|.++-
T Consensus 271 ~~~~-----~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 271 RIET-----MMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECCC
T ss_pred CHHH-----HHHHHHHHhcCCCEEEEEcc
Confidence 4222 15678889999 99998873
No 256
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=97.41 E-value=0.00019 Score=65.70 Aligned_cols=113 Identities=12% Similarity=0.165 Sum_probs=66.5
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCC--eEEEEcCCCCChhHHHh---c---CceecCCHHhhcCcCCEEEEcCCCCh---
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQLEKE---T---GAKFEEDLDTMLPKCDIVVVNTPLTE--- 185 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~--~V~~~dr~~~~~~~~~~---~---g~~~~~~l~ell~~aDvVi~~~p~~~--- 185 (304)
.++|+|||.|.||..++..+...|. +|..+|.+......+.+ . .+....++ +.+++||+|+++.....
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~ 92 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSLGSSQ 92 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC----C
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCCCCCC
Confidence 3799999999999999998876677 89999987632111111 1 23333567 66899999999973211
Q ss_pred -------hhhccccHHHH---hcCCCCCEEEEcCCCchhchHHHHHH--HHcCCceEE
Q 021995 186 -------KTRGMFDKDRI---AKMKKGVLIVNNARGAIMDTQAVVDA--CSSGHIAGY 231 (304)
Q Consensus 186 -------~t~~~i~~~~l---~~mk~g~ilVn~~rg~~vd~~aL~~a--L~~g~i~ga 231 (304)
.+..++ .+.+ ....+++++++++...-+-...+.+. +...++.|.
T Consensus 93 tR~dl~~~n~~i~-~~i~~~i~~~~p~a~iiv~sNP~~~~t~~~~~~~~~p~~rviG~ 149 (303)
T 2i6t_A 93 SYLDVVQSNVDMF-RALVPALGHYSQHSVLLVASQPVEIMTYVTWKLSTFPANRVIGI 149 (303)
T ss_dssp CHHHHHHHHHHHH-HHHHHHHHHHTTTCEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CHHHHHHHHHHHH-HHHHHHHHHhCCCeEEEEcCChHHHHHHHHHHhcCCCHHHeeCC
Confidence 111111 2222 22248999999887443333333332 223355554
No 257
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=97.41 E-value=0.0014 Score=59.88 Aligned_cols=127 Identities=16% Similarity=0.270 Sum_probs=87.3
Q ss_pred HHHhCCcEEEEcC-CCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEeeC---hhhHHH
Q 021995 57 AAAAAGLTVAEVT-GSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCG---RIGKLL 132 (304)
Q Consensus 57 ~~~~~gI~v~n~~-g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G---~IG~~l 132 (304)
.++..+|+|.|.- |....++ .+|+-++.+.+++ | .+.|.+|+++|=| ++.+++
T Consensus 109 la~~~~vPVINagdg~~~HPt--QaLaDl~Ti~e~~--------------------g-~l~glkva~vGD~~~~rva~Sl 165 (304)
T 3r7f_A 109 LVSQVNIPILNAGDGCGQHPT--QSLLDLMTIYEEF--------------------N-TFKGLTVSIHGDIKHSRVARSN 165 (304)
T ss_dssp HHHHCSSCEEESCCTTSCCHH--HHHHHHHHHHHHH--------------------S-CCTTCEEEEESCCTTCHHHHHH
T ss_pred HHHhCCCCEEeCCCCCCcCcH--HHHHHHHHHHHHh--------------------C-CCCCCEEEEEcCCCCcchHHHH
Confidence 3556789999985 4443332 2344445554421 1 4789999999975 699999
Q ss_pred HHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCCh-----------hhhccccHHHHhcCCC
Q 021995 133 LQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE-----------KTRGMFDKDRIAKMKK 201 (304)
Q Consensus 133 A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~-----------~t~~~i~~~~l~~mk~ 201 (304)
+..+..+|++|.+..|....++. ...| ...++++.++++|+|....-..+ ....-++.+.++.+|+
T Consensus 166 ~~~~~~~G~~v~~~~P~~~~~~~-~~~g--~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~ 242 (304)
T 3r7f_A 166 AEVLTRLGARVLFSGPSEWQDEE-NTFG--TYVSMDEAVESSDVVMLLRIQNERHQSAVSQEGYLNKYGLTVERAERMKR 242 (304)
T ss_dssp HHHHHHTTCEEEEESCGGGSCTT-CSSC--EECCHHHHHHHCSEEEECCCCTTTCCSSCCSTTHHHHHSBCHHHHTTSCT
T ss_pred HHHHHHcCCEEEEECCCccCcch-hhcC--ccCCHHHHhCCCCEEEeccchhhccccchhHHHHhCCCccCHHHHhhcCC
Confidence 99999999999999875422221 2233 34589999999999987532111 1124478899999999
Q ss_pred CCEEEEcC
Q 021995 202 GVLIVNNA 209 (304)
Q Consensus 202 g~ilVn~~ 209 (304)
+++|..+.
T Consensus 243 ~ai~mHcl 250 (304)
T 3r7f_A 243 HAIIMHPA 250 (304)
T ss_dssp TCEEECCS
T ss_pred CCEEECCC
Confidence 99998775
No 258
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=97.40 E-value=0.00014 Score=67.63 Aligned_cols=93 Identities=26% Similarity=0.233 Sum_probs=70.4
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-----C-CHHh-hcCcCCEEEEcCCCChhhh
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----E-DLDT-MLPKCDIVVVNTPLTEKTR 188 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~-~l~e-ll~~aDvVi~~~p~~~~t~ 188 (304)
.|++|.|+|.|.+|..+++.++.+|++|++.++++.+.+.++++|+..+ . ++.+ +....|+|+-+++.++ .
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~--~ 256 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLT--D 256 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCST--T
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCc--H
Confidence 5889999999999999999999999999999988877888888886432 1 3322 2247899999987521 0
Q ss_pred ccccHHHHhcCCCCCEEEEcCCC
Q 021995 189 GMFDKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn~~rg 211 (304)
..+ ...++.|+++..+|.++..
T Consensus 257 ~~~-~~~~~~l~~~G~iv~~g~~ 278 (360)
T 1piw_A 257 IDF-NIMPKAMKVGGRIVSISIP 278 (360)
T ss_dssp CCT-TTGGGGEEEEEEEEECCCC
T ss_pred HHH-HHHHHHhcCCCEEEEecCC
Confidence 112 3567788999999998743
No 259
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=97.40 E-value=0.00037 Score=65.02 Aligned_cols=90 Identities=17% Similarity=0.123 Sum_probs=68.4
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHHHhcCceec-------CCHHhhcC-----cCCEEEEcCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-------EDLDTMLP-----KCDIVVVNTP 182 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~l~ell~-----~aDvVi~~~p 182 (304)
.|++|.|+|.|.+|..+++.++.+|+ +|++.++++.+.+.++++|+... +++.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 58899999999999999999999999 79999988777777788886422 12333221 5899998886
Q ss_pred CChhhhccccHHHHhcCCCC-CEEEEcCC
Q 021995 183 LTEKTRGMFDKDRIAKMKKG-VLIVNNAR 210 (304)
Q Consensus 183 ~~~~t~~~i~~~~l~~mk~g-~ilVn~~r 210 (304)
..+. -...++.++++ ..+|.++-
T Consensus 271 ~~~~-----~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 271 RLDT-----MVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp CHHH-----HHHHHHHBCTTTCEEEECSC
T ss_pred CHHH-----HHHHHHHhhcCCcEEEEecc
Confidence 4222 15677888998 89988863
No 260
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=97.40 E-value=0.00046 Score=64.38 Aligned_cols=90 Identities=14% Similarity=0.046 Sum_probs=68.9
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHHHhcCceec-------CCHHhhc-----CcCCEEEEcCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-------EDLDTML-----PKCDIVVVNTP 182 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~l~ell-----~~aDvVi~~~p 182 (304)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++.+.+.++++|+... +++.+.+ ...|+|+-++.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 58899999999999999999999999 79999988777777888886422 1233322 25899998886
Q ss_pred CChhhhccccHHHHhcCCCC-CEEEEcCC
Q 021995 183 LTEKTRGMFDKDRIAKMKKG-VLIVNNAR 210 (304)
Q Consensus 183 ~~~~t~~~i~~~~l~~mk~g-~ilVn~~r 210 (304)
..+. -...++.++++ ..+|.++-
T Consensus 275 ~~~~-----~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 275 TAQT-----LKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECCC
T ss_pred CHHH-----HHHHHHHhhcCCCEEEEECC
Confidence 4221 15678889998 89988874
No 261
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=97.39 E-value=0.001 Score=61.48 Aligned_cols=132 Identities=12% Similarity=0.107 Sum_probs=90.9
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEeeC--hhhHHHHH
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCG--RIGKLLLQ 134 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G--~IG~~lA~ 134 (304)
.++-.+|+|.|.-+....++ .+|+-++.+.+++ .|..+.|.+|+++|=| +++++++.
T Consensus 116 lA~~~~vPVINa~~~~~HPt--Q~LaDl~Ti~e~~-------------------~g~~l~gl~ia~vGD~~~~va~Sl~~ 174 (333)
T 1duv_G 116 LAEYASVPVWNGLTNEFHPT--QLLADLLTMQEHL-------------------PGKAFNEMTLVYAGDARNNMGNSMLE 174 (333)
T ss_dssp HHHHHSSCEEESCCSSCCHH--HHHHHHHHHHHHS-------------------TTCCGGGCEEEEESCTTSHHHHHHHH
T ss_pred HHHhCCCCeEcCCCCCCCch--HHHHHHHHHHHHh-------------------cCCCCCCcEEEEECCCccchHHHHHH
Confidence 34456799999765433332 3455555555421 1214789999999986 99999999
Q ss_pred HhccCCCeEEEEcCCCC-Chh-H---H----HhcC--ceecCCHHhhcCcCCEEEEcCCC--C------hh-----hhcc
Q 021995 135 RLKPFNCNLLYHDRVKM-DPQ-L---E----KETG--AKFEEDLDTMLPKCDIVVVNTPL--T------EK-----TRGM 190 (304)
Q Consensus 135 ~l~~~G~~V~~~dr~~~-~~~-~---~----~~~g--~~~~~~l~ell~~aDvVi~~~p~--~------~~-----t~~~ 190 (304)
.+..+|++|.+..|... +.+ . + ++.| +....++++.++++|+|....=. . .+ ...-
T Consensus 175 ~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~~~~~er~~~~~~y~ 254 (333)
T 1duv_G 175 AAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLREYQ 254 (333)
T ss_dssp HHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGGC
T ss_pred HHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEeCCccccCccccchHHHHHHhhccc
Confidence 99999999999988642 222 2 1 1455 34568999999999999874321 0 00 1245
Q ss_pred ccHHHHhcC-CCCCEEEEcC
Q 021995 191 FDKDRIAKM-KKGVLIVNNA 209 (304)
Q Consensus 191 i~~~~l~~m-k~g~ilVn~~ 209 (304)
++.+.++.+ |++++|..+.
T Consensus 255 v~~~ll~~a~~~~ai~mHcL 274 (333)
T 1duv_G 255 VNSKMMQLTGNPEVKFLHCL 274 (333)
T ss_dssp BCHHHHHTTCCTTCEEEECS
T ss_pred cCHHHHHhccCCCcEEECCC
Confidence 788999999 9999998875
No 262
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=97.38 E-value=0.0028 Score=58.98 Aligned_cols=132 Identities=13% Similarity=0.071 Sum_probs=89.2
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEee-ChhhHHHHHH
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGC-GRIGKLLLQR 135 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~-G~IG~~lA~~ 135 (304)
.++..+|+|.|.-+....++ .+|+-++.+.+++. .|..+.|.+|++||= +++.++++..
T Consensus 113 lA~~~~vPVINag~~~~HPt--QaLaDl~TI~E~~~------------------~G~~l~glkva~vGD~~rva~Sl~~~ 172 (355)
T 4a8p_A 113 LANCATIPVINGMSDYNHPT--QELGDLCTMVEHLP------------------EGKKLEDCKVVFVGDATQVCFSLGLI 172 (355)
T ss_dssp HHHHCSSCEEECCCSSCCHH--HHHHHHHHHHHTCC------------------TTCCGGGCEEEEESCCCHHHHHHHHH
T ss_pred HHHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHhh------------------cCCCCCCCEEEEECCCchhHHHHHHH
Confidence 45668899999865433332 34555556555321 022478999999995 7899999999
Q ss_pred hccCCCeEEEEcCCCC-ChhH--------HHhcC--ceecCCHHhhcCcCCEEEEcC----CCC----hh----h--hcc
Q 021995 136 LKPFNCNLLYHDRVKM-DPQL--------EKETG--AKFEEDLDTMLPKCDIVVVNT----PLT----EK----T--RGM 190 (304)
Q Consensus 136 l~~~G~~V~~~dr~~~-~~~~--------~~~~g--~~~~~~l~ell~~aDvVi~~~----p~~----~~----t--~~~ 190 (304)
+..+|++|.+..|... +.+. ++..| +....+++ .++++|+|..-+ ... .+ . ..-
T Consensus 173 ~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVytd~w~smgq~~~~~~er~~~~~~~y~ 251 (355)
T 4a8p_A 173 TTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQ 251 (355)
T ss_dssp HHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEECCSSEETTEECCHHHHHHHHTTTTC
T ss_pred HHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEecccccCcchhhhhHHHHHHhccccc
Confidence 9999999999988642 2221 12345 34567899 999999998633 110 11 1 144
Q ss_pred ccHHHHhcCCCCCEEEEcC
Q 021995 191 FDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 191 i~~~~l~~mk~g~ilVn~~ 209 (304)
++.+.++.+|++++|..+.
T Consensus 252 vt~ell~~ak~dai~MHcL 270 (355)
T 4a8p_A 252 VNQEMMDRAGANCKFMHCL 270 (355)
T ss_dssp BCHHHHHHHCTTCEEEECS
T ss_pred cCHHHHHhcCCCcEEECCC
Confidence 6888888889999998886
No 263
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=97.37 E-value=0.00033 Score=63.86 Aligned_cols=97 Identities=14% Similarity=0.207 Sum_probs=60.9
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCC--eEEEEcCCCCChh-HHH--hcCc------e--ecCCHHhhcCcCCEEEEcCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-LEK--ETGA------K--FEEDLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~--~V~~~dr~~~~~~-~~~--~~g~------~--~~~~l~ell~~aDvVi~~~p 182 (304)
..++|+|||.|.||..++..|...|+ +|.++|++....+ ... ..+. . ...+. +.++.+|+|+++++
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~aD~Vii~v~ 84 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP-EICRDADMVVITAG 84 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG-GGGTTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCH-HHhCCCCEEEECCC
Confidence 34699999999999999999988888 9999999653222 011 1111 1 11243 56789999999995
Q ss_pred CChhh---h--------c---cccHHHHhcCCCCCEEEEcCCCchh
Q 021995 183 LTEKT---R--------G---MFDKDRIAKMKKGVLIVNNARGAIM 214 (304)
Q Consensus 183 ~~~~t---~--------~---~i~~~~l~~mk~g~ilVn~~rg~~v 214 (304)
....- + . -+-++ +....+++++|+++-|--+
T Consensus 85 ~~~~~g~~r~~~~~~n~~~~~~~~~~-i~~~~~~~~vi~~~Np~~~ 129 (319)
T 1lld_A 85 PRQKPGQSRLELVGATVNILKAIMPN-LVKVAPNAIYMLITNPVDI 129 (319)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHH-HHHHCTTSEEEECCSSHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHH-HHHhCCCceEEEecCchHH
Confidence 32210 0 0 11112 2223688999998776433
No 264
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.36 E-value=0.00011 Score=68.37 Aligned_cols=68 Identities=22% Similarity=0.214 Sum_probs=50.5
Q ss_pred CCEEEEEeeChhhHH-HHHHhccC-CCeEE-EEcCCCCChhHH-Hhc-CceecCCHHhhcCc--CCEEEEcCCCC
Q 021995 117 GKTVGTVGCGRIGKL-LLQRLKPF-NCNLL-YHDRVKMDPQLE-KET-GAKFEEDLDTMLPK--CDIVVVNTPLT 184 (304)
Q Consensus 117 g~~vgIIG~G~IG~~-lA~~l~~~-G~~V~-~~dr~~~~~~~~-~~~-g~~~~~~l~ell~~--aDvVi~~~p~~ 184 (304)
..+|||||+|.||+. +++.+... +++++ ++|+++...+.+ +.+ +...+.++++++++ .|+|++++|..
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 79 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQ 79 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcH
Confidence 358999999999995 88888765 78866 788876433333 333 34567899999975 49999999943
No 265
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=97.35 E-value=0.0032 Score=57.99 Aligned_cols=130 Identities=16% Similarity=0.219 Sum_probs=89.3
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEeeC--hhhHHHHH
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCG--RIGKLLLQ 134 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G--~IG~~lA~ 134 (304)
.++-.+|+|.|.-+....++ .+|+-++.+.+++ | .+.|.+|+++|=| ++.++++.
T Consensus 130 lA~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~--------------------g-~l~gl~va~vGD~~~rva~Sl~~ 186 (325)
T 1vlv_A 130 LAEYSGVPVYNGLTDEFHPT--QALADLMTIEENF--------------------G-RLKGVKVVFMGDTRNNVATSLMI 186 (325)
T ss_dssp HHHHHCSCEEESCCSSCCHH--HHHHHHHHHHHHH--------------------S-CSTTCEEEEESCTTSHHHHHHHH
T ss_pred HHHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHh--------------------C-CcCCcEEEEECCCCcCcHHHHHH
Confidence 34455799999654333332 3455555554421 1 4899999999985 99999999
Q ss_pred HhccCCCeEEEEcCCCC-Chh-H---H----HhcC--ceecCCHHhhcCcCCEEEEcCCC-------Chh-----hhccc
Q 021995 135 RLKPFNCNLLYHDRVKM-DPQ-L---E----KETG--AKFEEDLDTMLPKCDIVVVNTPL-------TEK-----TRGMF 191 (304)
Q Consensus 135 ~l~~~G~~V~~~dr~~~-~~~-~---~----~~~g--~~~~~~l~ell~~aDvVi~~~p~-------~~~-----t~~~i 191 (304)
.+..+|++|.+..|... +.+ . + ++.| +....++++.++++|+|....=. .++ ...-+
T Consensus 187 ~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~~w~smg~~~~~~~~~~~~~~y~v 266 (325)
T 1vlv_A 187 ACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDVWASMGEEDKEKERMALLKPYQV 266 (325)
T ss_dssp HHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECCCC----------CHHHHGGGCB
T ss_pred HHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEeccccccccccchHhHHHHHhhcCC
Confidence 99999999999998642 222 2 1 1456 44568999999999999874321 011 12456
Q ss_pred cHHHHhcC-CCCCEEEEcC
Q 021995 192 DKDRIAKM-KKGVLIVNNA 209 (304)
Q Consensus 192 ~~~~l~~m-k~g~ilVn~~ 209 (304)
+.+.++.+ |++++|..+.
T Consensus 267 ~~ell~~a~k~dai~mH~L 285 (325)
T 1vlv_A 267 NERVMEMTGKSETIFMHCL 285 (325)
T ss_dssp CHHHHHTTCCTTCEEEECS
T ss_pred CHHHHHhccCCCeEEECCC
Confidence 88999999 9999998775
No 266
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=97.35 E-value=0.00042 Score=64.51 Aligned_cols=90 Identities=18% Similarity=0.117 Sum_probs=68.9
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHHHhcCceec-------CCHHhhcC-----cCCEEEEcCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-------EDLDTMLP-----KCDIVVVNTP 182 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~l~ell~-----~aDvVi~~~p 182 (304)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++.+.+.++++|+... .++.+.+. ..|+++-++.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g 269 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 269 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCC
Confidence 58899999999999999999999999 79999988777777788886422 12333222 5899998886
Q ss_pred CChhhhccccHHHHhcCCCC-CEEEEcCC
Q 021995 183 LTEKTRGMFDKDRIAKMKKG-VLIVNNAR 210 (304)
Q Consensus 183 ~~~~t~~~i~~~~l~~mk~g-~ilVn~~r 210 (304)
..+. -...++.++++ ..+|.++-
T Consensus 270 ~~~~-----~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 270 NVKV-----MRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECSC
T ss_pred cHHH-----HHHHHHhhccCCcEEEEEec
Confidence 4222 25678889999 99998873
No 267
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=97.34 E-value=0.0052 Score=56.51 Aligned_cols=130 Identities=15% Similarity=0.157 Sum_probs=89.0
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEeeC-hhhHHHHHH
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCG-RIGKLLLQR 135 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G-~IG~~lA~~ 135 (304)
.++-.+|+|.|.-+....++ .+|+-++.+.+++ | .+.|.+|++||=| ++.++++..
T Consensus 118 lA~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~--------------------g-~l~gl~va~vGD~~~va~Sl~~~ 174 (321)
T 1oth_A 118 LAKEASIPIINGLSDLYHPI--QILADYLTLQEHY--------------------S-SLKGLTLSWIGDGNNILHSIMMS 174 (321)
T ss_dssp HHHHCSSCEEESCCSSCCHH--HHHHHHHHHHHHH--------------------S-CCTTCEEEEESCSSHHHHHHHTT
T ss_pred HHHhCCCCEEcCCCCCCCcH--HHHHHHHHHHHHh--------------------C-CcCCcEEEEECCchhhHHHHHHH
Confidence 34566799999765443332 3455555554421 1 4899999999975 488899899
Q ss_pred hccCCCeEEEEcCCCC--ChhHHH-------hcC--ceecCCHHhhcCcCCEEEEcC----CCChh--------hhcccc
Q 021995 136 LKPFNCNLLYHDRVKM--DPQLEK-------ETG--AKFEEDLDTMLPKCDIVVVNT----PLTEK--------TRGMFD 192 (304)
Q Consensus 136 l~~~G~~V~~~dr~~~--~~~~~~-------~~g--~~~~~~l~ell~~aDvVi~~~----p~~~~--------t~~~i~ 192 (304)
+..+|++|.+..|... +.+... +.| +....++++.++++|+|..-+ ....+ ...-++
T Consensus 175 ~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~d~w~s~g~e~~~~~~~~~~~~y~v~ 254 (321)
T 1oth_A 175 AAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTWISMGREEEKKKRLQAFQGYQVT 254 (321)
T ss_dssp TGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCGGGHHHHHHHTTTCCBC
T ss_pred HHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhccCCEEEEeccccccchhhhHHHHHhccCceEC
Confidence 9999999999998653 222211 234 455689999999999998843 11111 114468
Q ss_pred HHHHhcCCCCCEEEEcC
Q 021995 193 KDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 193 ~~~l~~mk~g~ilVn~~ 209 (304)
.+.++.+|++++|..+.
T Consensus 255 ~~~l~~a~~dai~mH~l 271 (321)
T 1oth_A 255 MKTAKVAASDWTFLHCL 271 (321)
T ss_dssp HHHHHTSCTTCEEEECS
T ss_pred HHHHhhcCCCCEEECCC
Confidence 89999999999998775
No 268
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=97.33 E-value=0.00022 Score=65.71 Aligned_cols=91 Identities=22% Similarity=0.233 Sum_probs=68.5
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHhh----cCcCCEEEEcCCCChh
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTM----LPKCDIVVVNTPLTEK 186 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~el----l~~aDvVi~~~p~~~~ 186 (304)
.|++|.|+|.|.+|..+++.++.+|++|++.++++...+.++++|+... .++.+. ....|+++.++...+.
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 243 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA 243 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHHH
Confidence 5789999999999999999999999999999987666666777776422 122222 2468999988864222
Q ss_pred hhccccHHHHhcCCCCCEEEEcCCC
Q 021995 187 TRGMFDKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 187 t~~~i~~~~l~~mk~g~ilVn~~rg 211 (304)
-...++.|+++..+|.++..
T Consensus 244 -----~~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 244 -----FQSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp -----HHHHHHHEEEEEEEEECCCC
T ss_pred -----HHHHHHHhhcCCEEEEeccc
Confidence 25677888999999998754
No 269
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.32 E-value=0.0004 Score=64.53 Aligned_cols=71 Identities=21% Similarity=0.265 Sum_probs=50.8
Q ss_pred cCCCEEEEEeeChhhHHHHHHhccC--------CCeEE-EEcCCCCChh-HHHhcCc-eecCCHHhhcC--cCCEEEEcC
Q 021995 115 LEGKTVGTVGCGRIGKLLLQRLKPF--------NCNLL-YHDRVKMDPQ-LEKETGA-KFEEDLDTMLP--KCDIVVVNT 181 (304)
Q Consensus 115 L~g~~vgIIG~G~IG~~lA~~l~~~--------G~~V~-~~dr~~~~~~-~~~~~g~-~~~~~l~ell~--~aDvVi~~~ 181 (304)
.+--+|||||+|.||+.-++.++.. +++|+ ++|+++...+ .++++|+ ..+.+++++++ +.|+|++++
T Consensus 23 MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~Iat 102 (393)
T 4fb5_A 23 MKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTT 102 (393)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECS
T ss_pred CCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECC
Confidence 3445899999999999887766542 56755 7788775544 4556676 46789999985 579999999
Q ss_pred CCCh
Q 021995 182 PLTE 185 (304)
Q Consensus 182 p~~~ 185 (304)
|...
T Consensus 103 P~~~ 106 (393)
T 4fb5_A 103 PNQF 106 (393)
T ss_dssp CGGG
T ss_pred ChHH
Confidence 9543
No 270
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.32 E-value=0.00053 Score=62.69 Aligned_cols=67 Identities=16% Similarity=0.146 Sum_probs=52.2
Q ss_pred CEEEEEee-ChhhHHHHHHhccCCCeE-EEEcCCCCChhHHHhc-CceecCCHHhhc----------CcCCEEEEcCCCC
Q 021995 118 KTVGTVGC-GRIGKLLLQRLKPFNCNL-LYHDRVKMDPQLEKET-GAKFEEDLDTML----------PKCDIVVVNTPLT 184 (304)
Q Consensus 118 ~~vgIIG~-G~IG~~lA~~l~~~G~~V-~~~dr~~~~~~~~~~~-g~~~~~~l~ell----------~~aDvVi~~~p~~ 184 (304)
.+|||||+ |.||+..++.++..+.++ .++|+++......+.. +...+.++++++ ++.|+|++++|..
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~ 83 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNH 83 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCGG
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCCch
Confidence 58999999 689999999998888885 4778877554333333 456677899887 6799999999954
No 271
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=97.32 E-value=0.0029 Score=57.80 Aligned_cols=130 Identities=12% Similarity=0.034 Sum_probs=88.3
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccC-CCEEEEEee-ChhhHHHHH
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLE-GKTVGTVGC-GRIGKLLLQ 134 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~-g~~vgIIG~-G~IG~~lA~ 134 (304)
.++-.+|+|.|.-.....++ .+|+-++.+.++. | .+. |.+|++||= +++.++++.
T Consensus 108 lA~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~--------------------g-~l~~gl~va~vGD~~~va~Sl~~ 164 (307)
T 3tpf_A 108 FARYSKAPVINALSELYHPT--QVLGDLFTIKEWN--------------------K-MQNGIAKVAFIGDSNNMCNSWLI 164 (307)
T ss_dssp HHHHCSSCEEEEECSSCCHH--HHHHHHHHHHHTT--------------------C-CGGGCCEEEEESCSSHHHHHHHH
T ss_pred HHHhCCCCEEeCCCCCcCcH--HHHHHHHHHHHHh--------------------C-CCCCCCEEEEEcCCCccHHHHHH
Confidence 45667899999755333332 2455555555432 1 467 999999995 678999999
Q ss_pred HhccCCCeEEEEcCCCC-Chh-HH---H----hcC--ceecCCHHhhcCcCCEEEEcC---CCCh-h--------hhccc
Q 021995 135 RLKPFNCNLLYHDRVKM-DPQ-LE---K----ETG--AKFEEDLDTMLPKCDIVVVNT---PLTE-K--------TRGMF 191 (304)
Q Consensus 135 ~l~~~G~~V~~~dr~~~-~~~-~~---~----~~g--~~~~~~l~ell~~aDvVi~~~---p~~~-~--------t~~~i 191 (304)
.+..+|++|.+..|... +.+ .. + ..| +....++++.++++|+|.... -..+ + ...-+
T Consensus 165 ~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~~~~~~~~y~v 244 (307)
T 3tpf_A 165 TAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITDTWVSMGEENEKERKIKEFEGFMI 244 (307)
T ss_dssp HHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTTGGGGHHHHHHHTGGGCB
T ss_pred HHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecCcccCCchhhHHHHHHHhccccc
Confidence 99999999999988652 222 21 1 334 345679999999999998765 1110 0 12346
Q ss_pred cHHHHhcCCCCCEEEEcC
Q 021995 192 DKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 192 ~~~~l~~mk~g~ilVn~~ 209 (304)
+.+.++.+|++++|..+.
T Consensus 245 ~~e~l~~a~~~ai~mH~l 262 (307)
T 3tpf_A 245 DEKAMSVANKDAILLHCL 262 (307)
T ss_dssp CHHHHHHSCTTCEEEECS
T ss_pred CHHHHHhcCCCcEEECCC
Confidence 888888899999888775
No 272
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.31 E-value=0.00077 Score=58.92 Aligned_cols=92 Identities=20% Similarity=0.163 Sum_probs=61.5
Q ss_pred ccccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCCh--hHHHhcCceec-CC-HHhhcCcCCEEEEcCCCChhh
Q 021995 112 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDP--QLEKETGAKFE-ED-LDTMLPKCDIVVVNTPLTEKT 187 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~--~~~~~~g~~~~-~~-l~ell~~aDvVi~~~p~~~~t 187 (304)
..+|.|++|.|||.|.+|...++.|...|++|+++++...+. +.....++... .+ .++.+.++|+|+.++... +.
T Consensus 26 fl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d~-~~ 104 (223)
T 3dfz_A 26 MLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATNDQ-AV 104 (223)
T ss_dssp EECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCCT-HH
T ss_pred EEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCCH-HH
Confidence 357999999999999999999999999999999999864321 11112223211 11 135678899998776533 32
Q ss_pred hccccHHHHhcCCCCCEEEEcC
Q 021995 188 RGMFDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 188 ~~~i~~~~l~~mk~g~ilVn~~ 209 (304)
|.......+ -.++||+.
T Consensus 105 ----N~~I~~~ak-~gi~VNvv 121 (223)
T 3dfz_A 105 ----NKFVKQHIK-NDQLVNMA 121 (223)
T ss_dssp ----HHHHHHHSC-TTCEEEC-
T ss_pred ----HHHHHHHHh-CCCEEEEe
Confidence 344444455 67788885
No 273
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.31 E-value=0.00062 Score=65.21 Aligned_cols=68 Identities=19% Similarity=0.291 Sum_probs=50.8
Q ss_pred CCEEEEEeeChhhHHHHHHhccC-CCeEE-EEcCCCCChhHHH----hcC---ceecC----CHHhhcC--cCCEEEEcC
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQLEK----ETG---AKFEE----DLDTMLP--KCDIVVVNT 181 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~-G~~V~-~~dr~~~~~~~~~----~~g---~~~~~----~l~ell~--~aDvVi~~~ 181 (304)
-.+|||||+|.||+..++.+... |++|+ ++|+++...+.+. ++| ...+. +++++++ +.|+|++++
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~t 99 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSS 99 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECC
T ss_pred CceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcC
Confidence 35899999999999999988764 77854 7788754333322 234 45566 8999997 589999999
Q ss_pred CCC
Q 021995 182 PLT 184 (304)
Q Consensus 182 p~~ 184 (304)
|..
T Consensus 100 p~~ 102 (444)
T 2ixa_A 100 PWE 102 (444)
T ss_dssp CGG
T ss_pred CcH
Confidence 954
No 274
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.31 E-value=0.00038 Score=60.16 Aligned_cols=73 Identities=25% Similarity=0.288 Sum_probs=53.4
Q ss_pred ccccCCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCc-eec-----CCHHhhcCcCCEEEEcCCCC
Q 021995 112 AYDLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGA-KFE-----EDLDTMLPKCDIVVVNTPLT 184 (304)
Q Consensus 112 ~~~L~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~-~~~-----~~l~ell~~aDvVi~~~p~~ 184 (304)
...+.|++|.|.|. |.||+.+++.|...|++|++.+|++...+.....++ ... +++.+.+.++|+|+.+....
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCC
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCC
Confidence 35789999999997 999999999999999999999997654444333344 221 45678889999999887643
No 275
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=97.31 E-value=0.00048 Score=61.94 Aligned_cols=97 Identities=16% Similarity=0.219 Sum_probs=67.1
Q ss_pred ccccCCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHH-HhcC----ceecCCHHhhcCcCCEEEEcCCCCh
Q 021995 112 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLE-KETG----AKFEEDLDTMLPKCDIVVVNTPLTE 185 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~-~~~g----~~~~~~l~ell~~aDvVi~~~p~~~ 185 (304)
+.++.++++.|+|.|..+++++..|...|+ +|++++|+..+.+.. +..+ ........+.++++|+|+.++|..-
T Consensus 120 g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~Gm 199 (269)
T 3tum_A 120 GFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGM 199 (269)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTTC
T ss_pred CCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCcccc
Confidence 446789999999999999999999998886 699999976433322 2111 1111223345678999999998643
Q ss_pred hh--hccccHHHHhcCCCCCEEEEc
Q 021995 186 KT--RGMFDKDRIAKMKKGVLIVNN 208 (304)
Q Consensus 186 ~t--~~~i~~~~l~~mk~g~ilVn~ 208 (304)
.. ..-++...+..++++.++.|+
T Consensus 200 ~~~~~~p~~~~~~~~l~~~~~v~D~ 224 (269)
T 3tum_A 200 GTRAELPLSAALLATLQPDTLVADV 224 (269)
T ss_dssp STTCCCSSCHHHHHTCCTTSEEEEC
T ss_pred CCCCCCCCChHHHhccCCCcEEEEE
Confidence 22 123566777788888877766
No 276
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=97.31 E-value=0.00042 Score=64.79 Aligned_cols=89 Identities=15% Similarity=0.102 Sum_probs=68.7
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHHHhcCceec-------CCHHhhcC-----cCCEEEEcCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-------EDLDTMLP-----KCDIVVVNTP 182 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~l~ell~-----~aDvVi~~~p 182 (304)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++++.+.+.++++|+..+ .++.+.+. ..|+++-++.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g 272 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG 272 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCC
Confidence 58899999999999999999999999 79999988888888888887432 22322221 4899998887
Q ss_pred CChhhhccccHHHHhcCCCC-CEEEEcC
Q 021995 183 LTEKTRGMFDKDRIAKMKKG-VLIVNNA 209 (304)
Q Consensus 183 ~~~~t~~~i~~~~l~~mk~g-~ilVn~~ 209 (304)
..+. -...++.++++ ..++.++
T Consensus 273 ~~~~-----~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 273 NVSV-----MRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECS
T ss_pred CHHH-----HHHHHHHhhccCCEEEEEc
Confidence 4222 25677889996 8888887
No 277
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=97.30 E-value=0.00016 Score=67.32 Aligned_cols=93 Identities=17% Similarity=0.252 Sum_probs=69.3
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCC---CChhHHHhcCceecC--CH-Hhhc---CcCCEEEEcCCCC
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVK---MDPQLEKETGAKFEE--DL-DTML---PKCDIVVVNTPLT 184 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~---~~~~~~~~~g~~~~~--~l-~ell---~~aDvVi~~~p~~ 184 (304)
.+.|++|.|+|.|.+|..+++.++.+|++|++.+++. ...+.++++|+...+ ++ +++. ...|+|+.++...
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 257 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGAD 257 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCCh
Confidence 5679999999999999999999999999999999876 555666777765431 11 1111 4589999988743
Q ss_pred hhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 185 EKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 185 ~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
... + ...++.|+++..+|+++-
T Consensus 258 ~~~---~-~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 258 VNI---L-GNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp THH---H-HHHGGGEEEEEEEEECSC
T ss_pred HHH---H-HHHHHHHhcCCEEEEEec
Confidence 221 0 456788899999999874
No 278
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=97.28 E-value=0.00054 Score=63.31 Aligned_cols=91 Identities=16% Similarity=0.205 Sum_probs=68.2
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec------CC-HHhh---c-----CcCCEEEEc
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE------ED-LDTM---L-----PKCDIVVVN 180 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~------~~-l~el---l-----~~aDvVi~~ 180 (304)
.|++|.|+|.|.+|...++.++.+|++|++.++++...+.++++|+... .+ .+++ . ...|+++-+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~ 247 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 247 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence 5789999999999999999999999999999987666667777776321 11 1222 2 358999988
Q ss_pred CCCChhhhccccHHHHhcCCCCCEEEEcCCC
Q 021995 181 TPLTEKTRGMFDKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 181 ~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg 211 (304)
+..... -...++.++++..+|.++.+
T Consensus 248 ~g~~~~-----~~~~~~~l~~~G~iv~~G~~ 273 (352)
T 1e3j_A 248 SGNEKC-----ITIGINITRTGGTLMLVGMG 273 (352)
T ss_dssp SCCHHH-----HHHHHHHSCTTCEEEECSCC
T ss_pred CCCHHH-----HHHHHHHHhcCCEEEEEecC
Confidence 864321 14667889999999998753
No 279
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.28 E-value=0.00057 Score=62.61 Aligned_cols=67 Identities=18% Similarity=0.207 Sum_probs=51.9
Q ss_pred CEEEEEee-ChhhHHHHHHhccCCCeE-EEEcCCCCChhHHHhc-CceecCCHHhhc-----------CcCCEEEEcCCC
Q 021995 118 KTVGTVGC-GRIGKLLLQRLKPFNCNL-LYHDRVKMDPQLEKET-GAKFEEDLDTML-----------PKCDIVVVNTPL 183 (304)
Q Consensus 118 ~~vgIIG~-G~IG~~lA~~l~~~G~~V-~~~dr~~~~~~~~~~~-g~~~~~~l~ell-----------~~aDvVi~~~p~ 183 (304)
.++||||+ |.||+..++.++..+.++ .++|+++......+.+ +...+.++++++ ++.|+|++++|.
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~ 83 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPN 83 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCG
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCc
Confidence 58999999 789999999998888885 4778876554333333 456677898887 579999999995
Q ss_pred C
Q 021995 184 T 184 (304)
Q Consensus 184 ~ 184 (304)
.
T Consensus 84 ~ 84 (318)
T 3oa2_A 84 Y 84 (318)
T ss_dssp G
T ss_pred H
Confidence 4
No 280
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.27 E-value=0.00019 Score=69.60 Aligned_cols=74 Identities=24% Similarity=0.277 Sum_probs=50.9
Q ss_pred cccccCCCEEEEEeeChhhHHHHHHhccC-CCeEEEEcCCCCChhHHH-hcCcee--c-----CCHHhhcCcCCEEEEcC
Q 021995 111 RAYDLEGKTVGTVGCGRIGKLLLQRLKPF-NCNLLYHDRVKMDPQLEK-ETGAKF--E-----EDLDTMLPKCDIVVVNT 181 (304)
Q Consensus 111 ~~~~L~g~~vgIIG~G~IG~~lA~~l~~~-G~~V~~~dr~~~~~~~~~-~~g~~~--~-----~~l~ell~~aDvVi~~~ 181 (304)
....+.+++|+|+|.|.+|+.+++.|... |++|++++|+..+.+... ..++.. . +++.++++++|+|+.++
T Consensus 17 ~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~t 96 (467)
T 2axq_A 17 IEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLI 96 (467)
T ss_dssp ------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECS
T ss_pred cccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECC
Confidence 34568899999999999999999999876 789999999754333222 223321 1 24556788999999999
Q ss_pred CCC
Q 021995 182 PLT 184 (304)
Q Consensus 182 p~~ 184 (304)
|..
T Consensus 97 p~~ 99 (467)
T 2axq_A 97 PYT 99 (467)
T ss_dssp CGG
T ss_pred chh
Confidence 854
No 281
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=97.25 E-value=0.0039 Score=57.34 Aligned_cols=130 Identities=13% Similarity=0.126 Sum_probs=87.5
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEee-ChhhHHHHHH
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGC-GRIGKLLLQR 135 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~-G~IG~~lA~~ 135 (304)
.++..+|+|.|.-.....++ .+|+-++.+.+++ | .+.|.+|++||= +++.++++..
T Consensus 120 lA~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~--------------------g-~l~glkva~vGD~~rva~Sl~~~ 176 (323)
T 3gd5_A 120 YAHYAGIPVINALTDHEHPC--QVVADLLTIRENF--------------------G-RLAGLKLAYVGDGNNVAHSLLLG 176 (323)
T ss_dssp HHHHHCSCEEEEECSSCCHH--HHHHHHHHHHHHH--------------------S-CCTTCEEEEESCCCHHHHHHHHH
T ss_pred HHHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHh--------------------C-CCCCCEEEEECCCCcHHHHHHHH
Confidence 34556789998755332232 2344445554421 1 478999999995 7789999999
Q ss_pred hccCCCeEEEEcCCCC-ChhH--------HHhcC--ceecCCHHhhcCcCCEEEEcCCCCh----------h--hhcccc
Q 021995 136 LKPFNCNLLYHDRVKM-DPQL--------EKETG--AKFEEDLDTMLPKCDIVVVNTPLTE----------K--TRGMFD 192 (304)
Q Consensus 136 l~~~G~~V~~~dr~~~-~~~~--------~~~~g--~~~~~~l~ell~~aDvVi~~~p~~~----------~--t~~~i~ 192 (304)
+..+|++|.+..|... +.+. +++.| +....++++.++++|+|....=... + ...-++
T Consensus 177 ~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~wqs~g~~~~~~~~~~~~~~y~vt 256 (323)
T 3gd5_A 177 CAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDVWTSMGQEAETQHRLQLFEQYQIN 256 (323)
T ss_dssp HHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCCC---------CCHHHHTTCCBC
T ss_pred HHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEeceecCCCcccchHHHHHhhccCCC
Confidence 9999999999988642 2221 12234 4556799999999999977542111 0 123578
Q ss_pred HHHHhcCCCCCEEEEcC
Q 021995 193 KDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 193 ~~~l~~mk~g~ilVn~~ 209 (304)
.+.++.+|++++|..+.
T Consensus 257 ~ell~~ak~dai~mHcl 273 (323)
T 3gd5_A 257 AALLNCAAAEAIVLHCL 273 (323)
T ss_dssp HHHHHTSCTTCEEEECS
T ss_pred HHHHhhcCCCcEEECCC
Confidence 89999999999998774
No 282
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.24 E-value=0.00022 Score=62.04 Aligned_cols=67 Identities=16% Similarity=0.172 Sum_probs=45.0
Q ss_pred CCEEEEEeeChhhHHHHHH--hccCCCeEE-EEcCCCCChhH-HHhcCceecCCHHhhcCcCCEEEEcCCC
Q 021995 117 GKTVGTVGCGRIGKLLLQR--LKPFNCNLL-YHDRVKMDPQL-EKETGAKFEEDLDTMLPKCDIVVVNTPL 183 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~--l~~~G~~V~-~~dr~~~~~~~-~~~~g~~~~~~l~ell~~aDvVi~~~p~ 183 (304)
..+|+|||+|++|+.+++. +...|++++ ++|.++..... ....++...+++++++++.|++++++|.
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs 155 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPA 155 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCc
Confidence 3579999999999999994 345688865 67876643322 2223344567889998777999999994
No 283
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.24 E-value=0.00031 Score=64.79 Aligned_cols=67 Identities=16% Similarity=0.275 Sum_probs=50.0
Q ss_pred CEEEEEeeChhhHH-HHHHhccC-CCeEE-EEcCCCCC-hhHHHhcCc-eecCCHHhhcC--cCCEEEEcCCCC
Q 021995 118 KTVGTVGCGRIGKL-LLQRLKPF-NCNLL-YHDRVKMD-PQLEKETGA-KFEEDLDTMLP--KCDIVVVNTPLT 184 (304)
Q Consensus 118 ~~vgIIG~G~IG~~-lA~~l~~~-G~~V~-~~dr~~~~-~~~~~~~g~-~~~~~l~ell~--~aDvVi~~~p~~ 184 (304)
.+|||||+|.||+. .+..++.. +++|+ ++|+++.. .+.++++|+ ..+.+++++++ +.|+|++++|..
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~ 97 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTS 97 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGG
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCc
Confidence 48999999999986 46666544 78866 67887643 334556776 46789999985 589999999954
No 284
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=97.22 E-value=0.00023 Score=66.15 Aligned_cols=90 Identities=14% Similarity=0.179 Sum_probs=68.4
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHH-hcCceec---CC---HHhhcCcCCEEEEcCCCChhhh
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-ETGAKFE---ED---LDTMLPKCDIVVVNTPLTEKTR 188 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~---~~---l~ell~~aDvVi~~~p~~~~t~ 188 (304)
.|++|.|+|.|.+|...++.++.+|++|++.++++.+.+.+. ++|+..+ .+ +.++....|+|+-++.....
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~~-- 257 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHA-- 257 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChHH--
Confidence 688999999999999999999999999999998776555655 6776421 22 22334568999988864321
Q ss_pred ccccHHHHhcCCCCCEEEEcCC
Q 021995 189 GMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn~~r 210 (304)
-...++.++++..+|.++.
T Consensus 258 ---~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 258 ---LEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp ---SHHHHTTEEEEEEEEECSC
T ss_pred ---HHHHHHHhccCCEEEEeCC
Confidence 2567788999999999874
No 285
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.22 E-value=0.00054 Score=63.23 Aligned_cols=67 Identities=24% Similarity=0.410 Sum_probs=51.7
Q ss_pred CEEEEEeeC-hhhHHHHHHhccC--CCeE-EEEcCCCCChh-HHHhcCc-eecCCHHhhcC--cCCEEEEcCCCC
Q 021995 118 KTVGTVGCG-RIGKLLLQRLKPF--NCNL-LYHDRVKMDPQ-LEKETGA-KFEEDLDTMLP--KCDIVVVNTPLT 184 (304)
Q Consensus 118 ~~vgIIG~G-~IG~~lA~~l~~~--G~~V-~~~dr~~~~~~-~~~~~g~-~~~~~l~ell~--~aDvVi~~~p~~ 184 (304)
.+|||||+| .+|+..+..++.. ++++ .++|+++...+ .+++++. ..+.+++++++ +.|+|++++|..
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 93 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVE 93 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGG
T ss_pred eeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCch
Confidence 489999999 8999999988765 5776 57788654332 3445676 66789999985 589999999954
No 286
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.22 E-value=0.00049 Score=63.75 Aligned_cols=91 Identities=21% Similarity=0.222 Sum_probs=68.3
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHHHhcCceec---C-----CHH-hhc----CcCCEEEEcC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE---E-----DLD-TML----PKCDIVVVNT 181 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~---~-----~l~-ell----~~aDvVi~~~ 181 (304)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++.+.+.++++|+... . ++. ++. ...|+|+-++
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 57899999999999999999999999 89999987666677777886421 1 111 111 3589999988
Q ss_pred CCChhhhccccHHHHhcCCCCCEEEEcCCC
Q 021995 182 PLTEKTRGMFDKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 182 p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg 211 (304)
..... -...++.++++..+|.++-+
T Consensus 251 g~~~~-----~~~~~~~l~~~G~iv~~G~~ 275 (356)
T 1pl8_A 251 GAEAS-----IQAGIYATRSGGTLVLVGLG 275 (356)
T ss_dssp CCHHH-----HHHHHHHSCTTCEEEECSCC
T ss_pred CChHH-----HHHHHHHhcCCCEEEEEecC
Confidence 74322 14667889999999998753
No 287
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.22 E-value=0.0005 Score=62.35 Aligned_cols=105 Identities=14% Similarity=0.163 Sum_probs=70.6
Q ss_pred CCEEEEEee-ChhhHHHHHHhccCCCeEE-EEcCCCCChhHHHhcCceecCCHHhhcC--cCCEEEEcCCCChhhhcccc
Q 021995 117 GKTVGTVGC-GRIGKLLLQRLKPFNCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 117 g~~vgIIG~-G~IG~~lA~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~l~ell~--~aDvVi~~~p~~~~t~~~i~ 192 (304)
..+|+|+|+ |.+|+.+++.+...|++++ .+|+..... ...|+..+.+++++.. ..|++++++|.... ...+
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~---~~~G~~vy~sl~el~~~~~~D~viI~tP~~~~-~~~~- 81 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGT---THLGLPVFNTVREAVAATGATASVIYVPAPFC-KDSI- 81 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC---EETTEEEESSHHHHHHHHCCCEEEECCCGGGH-HHHH-
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccc---eeCCeeccCCHHHHhhcCCCCEEEEecCHHHH-HHHH-
Confidence 468999999 9999999999988899844 666642111 1357777789999988 89999999995322 2222
Q ss_pred HHHHhcCCCC-CEEEEcCCCc-hhchHHHHHHHHcCCce
Q 021995 193 KDRIAKMKKG-VLIVNNARGA-IMDTQAVVDACSSGHIA 229 (304)
Q Consensus 193 ~~~l~~mk~g-~ilVn~~rg~-~vd~~aL~~aL~~g~i~ 229 (304)
.+.+ +.| ..+|..+.|- .-+.+.|.++.++..+.
T Consensus 82 ~ea~---~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~ 117 (288)
T 2nu8_A 82 LEAI---DAGIKLIITITEGIPTLDMLTVKVKLDEAGVR 117 (288)
T ss_dssp HHHH---HTTCSEEEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HHHH---HCCCCEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 2333 233 3345566554 33556888888776654
No 288
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=97.21 E-value=0.004 Score=58.16 Aligned_cols=130 Identities=14% Similarity=0.172 Sum_probs=88.0
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEeeC--hhhHHHHH
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCG--RIGKLLLQ 134 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G--~IG~~lA~ 134 (304)
.++-.+|+|.|.-+....++ .+|+=++.+.+++ | .+.|++|++||=| +++++++.
T Consensus 143 lA~~s~vPVINa~~~~~HPt--QaLaDl~Ti~E~~--------------------G-~l~glkva~vGD~~nnva~Sl~~ 199 (365)
T 4amu_A 143 LVKYSGVPVWNGLTDDEHPT--QIIADFMTMKEKF--------------------G-NLKNKKIVFIGDYKNNVGVSTMI 199 (365)
T ss_dssp HHHHHCSCEEEEECSSCCHH--HHHHHHHHHHHHH--------------------S-SCTTCEEEEESSTTSHHHHHHHH
T ss_pred HHHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHh--------------------C-CCCCCEEEEECCCCcchHHHHHH
Confidence 34556788888755433332 2344444444321 1 3899999999987 78999999
Q ss_pred HhccCCCeEEEEcCCCCCh----hH-------HHhcC--ceecCCHHhhcCcCCEEEEcC--CCCh--h---------hh
Q 021995 135 RLKPFNCNLLYHDRVKMDP----QL-------EKETG--AKFEEDLDTMLPKCDIVVVNT--PLTE--K---------TR 188 (304)
Q Consensus 135 ~l~~~G~~V~~~dr~~~~~----~~-------~~~~g--~~~~~~l~ell~~aDvVi~~~--p~~~--~---------t~ 188 (304)
.+..+|++|.+..|....+ +. +++.| +....++++.++++|+|..-+ +..+ + ..
T Consensus 200 ~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDVVytd~W~smg~~~~~~~er~~~~~~ 279 (365)
T 4amu_A 200 GAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKILAAQDADVIYTDVWVSLGEPFELFDKRIGELKN 279 (365)
T ss_dssp HHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHHHTTTCSEEEECCSCCTTCCHHHHHHHHHHHTT
T ss_pred HHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHHHhcCCCEEEecccccCCchhhhHHHHHHHhcc
Confidence 9999999999998854222 21 23345 345679999999999998742 1111 1 11
Q ss_pred ccccHHHHhcCCCCCEEEEcC
Q 021995 189 GMFDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn~~ 209 (304)
.-++.+.++.+|++++|..+.
T Consensus 280 y~vt~ell~~a~~dai~MHcL 300 (365)
T 4amu_A 280 FQVDMNMIKAAKNDVIFLHCL 300 (365)
T ss_dssp CCBCHHHHHHSCTTCEEEECS
T ss_pred cccCHHHHHhcCCCcEEECCC
Confidence 347888999999999998886
No 289
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.21 E-value=0.00031 Score=64.46 Aligned_cols=93 Identities=14% Similarity=0.124 Sum_probs=57.8
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCC--eEEEEcCCCCChhH-HHhc---------CceecCCHHhhcCcCCEEEEcCCCC
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQL-EKET---------GAKFEEDLDTMLPKCDIVVVNTPLT 184 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~--~V~~~dr~~~~~~~-~~~~---------g~~~~~~l~ell~~aDvVi~~~p~~ 184 (304)
.++|+|||.|.||..++..++..|. +|..+|++....+. ..++ ..+...+..+.+++||+|+++.|..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~~ 85 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGAN 85 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCCC
Confidence 3699999999999999998876554 89999986531111 1111 0111123456789999999997653
Q ss_pred hhh-----------hccccHH---HHhcCCCCCEEEEcCC
Q 021995 185 EKT-----------RGMFDKD---RIAKMKKGVLIVNNAR 210 (304)
Q Consensus 185 ~~t-----------~~~i~~~---~l~~mk~g~ilVn~~r 210 (304)
..- ..++ .+ .+....|++++++++.
T Consensus 86 ~~~g~~r~dl~~~n~~i~-~~i~~~i~~~~p~a~~iv~tN 124 (316)
T 1ldn_A 86 QKPGETRLDLVDKNIAIF-RSIVESVMASGFQGLFLVATN 124 (316)
T ss_dssp CCTTTCSGGGHHHHHHHH-HHHHHHHHHHTCCSEEEECSS
T ss_pred CCCCCCHHHHHHcChHHH-HHHHHHHHHHCCCCEEEEeCC
Confidence 210 0111 11 2223358889999865
No 290
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=97.21 E-value=0.00024 Score=64.24 Aligned_cols=88 Identities=15% Similarity=0.140 Sum_probs=66.5
Q ss_pred CCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec------CCHHhhcCcCCEEEEcCCCChhhh
Q 021995 116 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE------EDLDTMLPKCDIVVVNTPLTEKTR 188 (304)
Q Consensus 116 ~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~------~~l~ell~~aDvVi~~~p~~~~t~ 188 (304)
.|++|.|+|. |.+|..+++.++.+|++|++.++++.+.+.++++|.... .++.+.+...|+++. +.. +.
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~-~~-- 200 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG-KE-- 200 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC-TT--
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH-HH--
Confidence 5789999998 999999999999999999999987766677777776432 122233467899988 754 21
Q ss_pred ccccHHHHhcCCCCCEEEEcCC
Q 021995 189 GMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn~~r 210 (304)
-...++.|+++..+|.++.
T Consensus 201 ---~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 201 ---VEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp ---HHHHHTTEEEEEEEEEC--
T ss_pred ---HHHHHHhhccCCEEEEEeC
Confidence 2577888999999998863
No 291
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=97.20 E-value=0.0037 Score=56.68 Aligned_cols=152 Identities=14% Similarity=0.083 Sum_probs=92.3
Q ss_pred cchhhhccccceeeccccccchhchhHH---HhcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEE-cCCCChhHHH
Q 021995 2 AMKRVASSAINAFASSGFLRSSSRFSRH---YASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAE-VTGSNVVSVA 77 (304)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n-~~g~~~~~vA 77 (304)
||++.-.+.++.-..+.-+.....+... |...- .-.|..-...-. .+....++-.+|+|.| .-|....++
T Consensus 55 A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~-~D~iviR~~~~~----~~~~~la~~~~vPVINAG~g~~~HPt- 128 (291)
T 3d6n_B 55 AARELGIETYLVSGSESSTVKGESFFDTLKTFEGLG-FDYVVFRVPFVF----FPYKEIVKSLNLRLVNAGDGTHQHPS- 128 (291)
T ss_dssp HHHHTTCEEEEEETTTTSCCTTCCHHHHHHHHHHTT-CSEEEEEESSCC----CSCHHHHHTCSSEEEEEEETTTBCHH-
T ss_pred HHHHhCCeEEEECCccCcccCCCcHHHHHHHHHHhc-CCEEEEEcCChH----HHHHHHHHhCCCCEEeCccCCCcCcH-
Confidence 3445544544443322233455555433 33321 134444322222 2222145567899999 334443332
Q ss_pred HHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEee---ChhhHHHHHHhccCCCeEEEEcCCCCChh
Q 021995 78 EDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGC---GRIGKLLLQRLKPFNCNLLYHDRVKMDPQ 154 (304)
Q Consensus 78 E~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~---G~IG~~lA~~l~~~G~~V~~~dr~~~~~~ 154 (304)
.+|+-++.+.+++ | .+.|.+|+++|= +++.++++..+..+|++|.+..|....+.
T Consensus 129 -QaLaDl~Ti~e~~--------------------g-~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~ 186 (291)
T 3d6n_B 129 -QGLIDFFTIKEHF--------------------G-EVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPR 186 (291)
T ss_dssp -HHHHHHHHHHHHH--------------------S-CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCT
T ss_pred -HHHHHHHHHHHHh--------------------C-CcCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCc
Confidence 2344455554421 1 488999999997 89999999999999999999988642222
Q ss_pred HHHhcCceecCCHHhhcCcCCEEEEcCC
Q 021995 155 LEKETGAKFEEDLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 155 ~~~~~g~~~~~~l~ell~~aDvVi~~~p 182 (304)
...+.|+....++++.++++|+|.. +-
T Consensus 187 ~~~~~g~~~~~d~~eav~~aDvvy~-~~ 213 (291)
T 3d6n_B 187 DVEVFKVDVFDDVDKGIDWADVVIW-LR 213 (291)
T ss_dssp TGGGGCEEEESSHHHHHHHCSEEEE-CC
T ss_pred hHHHCCCEEEcCHHHHhCCCCEEEE-eC
Confidence 2335577777899999999999988 54
No 292
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.19 E-value=0.00054 Score=66.49 Aligned_cols=69 Identities=14% Similarity=0.200 Sum_probs=52.4
Q ss_pred CCCEEEEEee----ChhhHHHHHHhccC--CCeEE-EEcCCCCChh-HHHhcCce---ecCCHHhhcC--cCCEEEEcCC
Q 021995 116 EGKTVGTVGC----GRIGKLLLQRLKPF--NCNLL-YHDRVKMDPQ-LEKETGAK---FEEDLDTMLP--KCDIVVVNTP 182 (304)
Q Consensus 116 ~g~~vgIIG~----G~IG~~lA~~l~~~--G~~V~-~~dr~~~~~~-~~~~~g~~---~~~~l~ell~--~aDvVi~~~p 182 (304)
.-.+|||||+ |.||+..++.+... +++|+ ++|+++...+ .++++|+. .+.+++++++ +.|+|++++|
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp 117 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVK 117 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSC
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCC
Confidence 3458999999 99999999988865 78864 7888654332 34455653 6789999985 6999999999
Q ss_pred CC
Q 021995 183 LT 184 (304)
Q Consensus 183 ~~ 184 (304)
..
T Consensus 118 ~~ 119 (479)
T 2nvw_A 118 VP 119 (479)
T ss_dssp HH
T ss_pred cH
Confidence 44
No 293
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.19 E-value=0.00035 Score=67.27 Aligned_cols=69 Identities=20% Similarity=0.177 Sum_probs=49.6
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHH-hcC-cee----c---CCHHhhcCcCCEEEEcCCCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-ETG-AKF----E---EDLDTMLPKCDIVVVNTPLT 184 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~-~~g-~~~----~---~~l~ell~~aDvVi~~~p~~ 184 (304)
.+++|+|+|.|.||+.+++.|...|++|.+++|+..+.+... ..+ ... . ++++++++++|+|+.++|..
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 468999999999999999999999999999999653222111 111 111 1 24557788999999999864
No 294
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=97.18 E-value=0.00027 Score=65.04 Aligned_cols=90 Identities=20% Similarity=0.214 Sum_probs=67.9
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHhhc----CcCCEEEEcCCCChh
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML----PKCDIVVVNTPLTEK 186 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell----~~aDvVi~~~p~~~~ 186 (304)
.|++|.|+|.|.+|...++.++.+|++|++.++++.+.+.++++|+... .++.+.+ ...|+++.+....+.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~~ 245 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKA 245 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHHH
Confidence 6889999999999999999999999999999987767777788886421 1232222 257888888753322
Q ss_pred hhccccHHHHhcCCCCCEEEEcCC
Q 021995 187 TRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 187 t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
-...++.++++..++.++-
T Consensus 246 -----~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 246 -----FSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp -----HHHHHHHEEEEEEEEECSC
T ss_pred -----HHHHHHHhccCCEEEEeCC
Confidence 1466778889999988874
No 295
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.16 E-value=0.00062 Score=64.18 Aligned_cols=70 Identities=20% Similarity=0.177 Sum_probs=52.9
Q ss_pred CCCEEEEEeeCh---hhHHHHHHhccCC-CeEE--EEcCCCCCh-hHHHhcCc---eecCCHHhhcCc-------CCEEE
Q 021995 116 EGKTVGTVGCGR---IGKLLLQRLKPFN-CNLL--YHDRVKMDP-QLEKETGA---KFEEDLDTMLPK-------CDIVV 178 (304)
Q Consensus 116 ~g~~vgIIG~G~---IG~~lA~~l~~~G-~~V~--~~dr~~~~~-~~~~~~g~---~~~~~l~ell~~-------aDvVi 178 (304)
.-.+|||||+|. ||+..+..++..+ ++++ ++|+++... ..++++|+ ..+.+++++++. .|+|+
T Consensus 11 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~ 90 (398)
T 3dty_A 11 QPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVS 90 (398)
T ss_dssp SCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEE
T ss_pred CcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEE
Confidence 345899999999 9999988776554 7766 468876433 33456777 567899999865 99999
Q ss_pred EcCCCCh
Q 021995 179 VNTPLTE 185 (304)
Q Consensus 179 ~~~p~~~ 185 (304)
+++|...
T Consensus 91 i~tp~~~ 97 (398)
T 3dty_A 91 IATPNGT 97 (398)
T ss_dssp EESCGGG
T ss_pred ECCCcHH
Confidence 9999653
No 296
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.16 E-value=0.0013 Score=60.41 Aligned_cols=114 Identities=18% Similarity=0.198 Sum_probs=66.4
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCC--eEEEEcCCCCChh-HHHhc--C------ceecCCHHhhcCcCCEEEEcCCCCh
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-LEKET--G------AKFEEDLDTMLPKCDIVVVNTPLTE 185 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~--~V~~~dr~~~~~~-~~~~~--g------~~~~~~l~ell~~aDvVi~~~p~~~ 185 (304)
..+|+|||.|.+|..++..+...|. +|..+|.+....+ ...++ + .+...+..+.+++||+|+++.+...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p~ 86 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGANR 86 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 3589999999999999999987777 8999998754322 12221 1 1111123567899999999987532
Q ss_pred hhhcc-------cc----H---HHHhcCCCCCEEEEcCCCchhchHHHHHH--HHcCCceEE
Q 021995 186 KTRGM-------FD----K---DRIAKMKKGVLIVNNARGAIMDTQAVVDA--CSSGHIAGY 231 (304)
Q Consensus 186 ~t~~~-------i~----~---~~l~~mk~g~ilVn~~rg~~vd~~aL~~a--L~~g~i~ga 231 (304)
. .+. .| . +.+....|++++|+++..-=+....+.+. +...++.|.
T Consensus 87 k-~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~k~s~~p~~rviG~ 147 (318)
T 1y6j_A 87 K-PGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMIQKWSGLPVGKVIGS 147 (318)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred C-CCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHcCCCHHHEecc
Confidence 1 111 00 1 12223368999999855433333334333 344466665
No 297
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=97.16 E-value=0.0038 Score=59.75 Aligned_cols=109 Identities=15% Similarity=0.211 Sum_probs=71.1
Q ss_pred ccccCCCEEEEEeeChhhHHHHHHhccCCCeEE-EEcCC-------CCChhHHHh----cC-------ceecCCHHhhc-
Q 021995 112 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRV-------KMDPQLEKE----TG-------AKFEEDLDTML- 171 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~-~~dr~-------~~~~~~~~~----~g-------~~~~~~l~ell- 171 (304)
+.++.|++|.|.|+|++|+.+|+.|...|.+|+ +.|.+ ....+...+ .+ .+.. +.++++
T Consensus 230 g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i-~~~ei~~ 308 (440)
T 3aog_A 230 GLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPL-PAADFWG 308 (440)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEEC-CHHHHTT
T ss_pred CCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEc-Cchhhhc
Confidence 347899999999999999999999999999988 44543 222222211 11 2233 445554
Q ss_pred CcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 172 PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 172 ~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
..||+++-|... +.++.+....++ -.+++-.+.+++- .+-.+.|.+..+.
T Consensus 309 ~~~DIlvPcA~~-----n~i~~~na~~l~-ak~VvEgAN~p~t--~eA~~iL~~~GI~ 358 (440)
T 3aog_A 309 LPVEFLVPAALE-----KQITEQNAWRIR-ARIVAEGANGPTT--PAADDILLEKGVL 358 (440)
T ss_dssp CCCSEEEECSSS-----SCBCTTTGGGCC-CSEEECCSSSCBC--HHHHHHHHHHTCE
T ss_pred CCCcEEEecCCc-----CccchhhHHHcC-CcEEEecCccccC--HHHHHHHHHCCCE
Confidence 379999988753 455666666663 4667777777753 3344556666555
No 298
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.14 E-value=0.00093 Score=63.48 Aligned_cols=69 Identities=20% Similarity=0.242 Sum_probs=51.2
Q ss_pred CCEEEEEeeCh---hhHHHHHHhccCC-CeEE--EEcCCCCCh-hHHHhcCc---eecCCHHhhcCc-------CCEEEE
Q 021995 117 GKTVGTVGCGR---IGKLLLQRLKPFN-CNLL--YHDRVKMDP-QLEKETGA---KFEEDLDTMLPK-------CDIVVV 179 (304)
Q Consensus 117 g~~vgIIG~G~---IG~~lA~~l~~~G-~~V~--~~dr~~~~~-~~~~~~g~---~~~~~l~ell~~-------aDvVi~ 179 (304)
-.+|||||+|. ||+..+..++..+ ++++ ++|+++... +.++++|+ ..+.+++++++. .|+|++
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I 116 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAI 116 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEE
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEE
Confidence 35899999999 9999888776554 6765 568865433 34456677 467899999876 999999
Q ss_pred cCCCCh
Q 021995 180 NTPLTE 185 (304)
Q Consensus 180 ~~p~~~ 185 (304)
++|...
T Consensus 117 ~tp~~~ 122 (417)
T 3v5n_A 117 VTPNHV 122 (417)
T ss_dssp CSCTTS
T ss_pred CCCcHH
Confidence 999653
No 299
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.13 E-value=0.00086 Score=61.31 Aligned_cols=92 Identities=16% Similarity=0.221 Sum_probs=59.5
Q ss_pred CEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhH-HHh--c-------C--ceecCCHHhhcCcCCEEEEcCCCC
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQL-EKE--T-------G--AKFEEDLDTMLPKCDIVVVNTPLT 184 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~-~~~--~-------g--~~~~~~l~ell~~aDvVi~~~p~~ 184 (304)
++|+|||.|.+|..++..+...|. +|..+|.+....+. ..+ . . +....++ +.+++||+|+++.+..
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~p 81 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGAP 81 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 589999999999999999988886 89999987543321 111 0 1 2223566 6789999999997532
Q ss_pred hh-----------hhccccHHH---HhcCCCCCEEEEcCCC
Q 021995 185 EK-----------TRGMFDKDR---IAKMKKGVLIVNNARG 211 (304)
Q Consensus 185 ~~-----------t~~~i~~~~---l~~mk~g~ilVn~~rg 211 (304)
.. +..++ .+. +....+++++++++..
T Consensus 82 ~~~g~~r~dl~~~n~~i~-~~i~~~i~~~~p~a~vi~~tNP 121 (309)
T 1ur5_A 82 RKPGMSREDLIKVNADIT-RACISQAAPLSPNAVIIMVNNP 121 (309)
T ss_dssp -------CHHHHHHHHHH-HHHHHHHGGGCTTCEEEECCSS
T ss_pred CCCCCCHHHHHHHHHHHH-HHHHHHHHhhCCCeEEEEcCCc
Confidence 21 00111 122 2333588999998653
No 300
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=97.13 E-value=0.00047 Score=64.80 Aligned_cols=67 Identities=16% Similarity=0.174 Sum_probs=53.1
Q ss_pred CCEEEEEeeChhhHHHHHHhccC--CCeEE-EEcCCCC-ChhHHHhcCceecCCHHhhcCcCCEEEEcCCCC
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPF--NCNLL-YHDRVKM-DPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLT 184 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~--G~~V~-~~dr~~~-~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~ 184 (304)
-.+|||||.| +|+..++.++.. +++++ ++|++.. ..+.++++|+..+.++++++.+.|++++++|..
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~ 77 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRST 77 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCc
Confidence 3589999999 799988888765 67865 6788764 334566789888889999999999999999854
No 301
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=97.13 E-value=0.0038 Score=59.78 Aligned_cols=140 Identities=12% Similarity=0.090 Sum_probs=101.5
Q ss_pred CCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCC
Q 021995 61 AGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFN 140 (304)
Q Consensus 61 ~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G 140 (304)
..|+|.|.. -.-+|--+++.+|+.+|- .+..|...+|.|.|.|..|-.+|+.+...|
T Consensus 186 ~~ipvFnDD---~qGTA~V~lAgllnAlki--------------------~gk~l~d~riV~~GAGaAGigia~ll~~~G 242 (487)
T 3nv9_A 186 CDIPVWHDD---QQGTASVTLAGLLNALKL--------------------VKKDIHECRMVFIGAGSSNTTCLRLIVTAG 242 (487)
T ss_dssp CSSCEEETT---THHHHHHHHHHHHHHHHH--------------------HTCCGGGCCEEEECCSHHHHHHHHHHHHTT
T ss_pred ccCCccccc---cchHHHHHHHHHHHHHHH--------------------hCCChhhcEEEEECCCHHHHHHHHHHHHcC
Confidence 489999976 355677788999999872 245788999999999999999999999999
Q ss_pred C---eEEEEcCCC----CChhH------------HHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHHHHhcCCC
Q 021995 141 C---NLLYHDRVK----MDPQL------------EKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKK 201 (304)
Q Consensus 141 ~---~V~~~dr~~----~~~~~------------~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~ 201 (304)
. +++.+|+.. ...+. +.........+|.|+++.+|+++=+... ..+.+.++.++.|.+
T Consensus 243 ~~~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~adVlIG~S~~---~pg~ft~e~V~~Ma~ 319 (487)
T 3nv9_A 243 ADPKKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNPSKFGSIAEACVGADVLISLSTP---GPGVVKAEWIKSMGE 319 (487)
T ss_dssp CCGGGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCTTCCCSHHHHHTTCSEEEECCCS---SCCCCCHHHHHTSCS
T ss_pred CCcccEEEEeccccccCCcchhhhhcccHHHHHHHHhcccccCCCHHHHHhcCCEEEEeccc---CCCCCCHHHHHhhcC
Confidence 8 699999863 11111 1111111345899999999987644311 136899999999999
Q ss_pred CCEEEEcCCCchhchHHHHHHHHcCCc
Q 021995 202 GVLIVNNARGAIMDTQAVVDACSSGHI 228 (304)
Q Consensus 202 g~ilVn~~rg~~vd~~aL~~aL~~g~i 228 (304)
..++.-.|.... |-.=.++.+.|..
T Consensus 320 ~PIIFaLSNPtp--Ei~pe~A~~~G~a 344 (487)
T 3nv9_A 320 KPIVFCCANPVP--EIYPYEAKEAGAY 344 (487)
T ss_dssp SCEEEECCSSSC--SSCHHHHHHTTCS
T ss_pred CCEEEECCCCCc--cCCHHHHHHhCCE
Confidence 999999998764 3223344445663
No 302
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=97.12 E-value=0.0014 Score=63.16 Aligned_cols=94 Identities=23% Similarity=0.260 Sum_probs=68.4
Q ss_pred cccCCCEEEEEeeC----------hhhHHHHHHhccCCCeEEEEcCCCCChhHHHhc-CceecCCHHhhcCcCCEEEEcC
Q 021995 113 YDLEGKTVGTVGCG----------RIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET-GAKFEEDLDTMLPKCDIVVVNT 181 (304)
Q Consensus 113 ~~L~g~~vgIIG~G----------~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~~~~l~ell~~aDvVi~~~ 181 (304)
..+.|++|+|+|+. .-...+++.|...|++|.+|||.-. .+....+ ++...+++++.++++|+|++++
T Consensus 318 ~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~-~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t 396 (446)
T 4a7p_A 318 GDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGV-EQASKMLTDVEFVENPYAAADGADALVIVT 396 (446)
T ss_dssp SCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCH-HHHGGGCSSCCBCSCHHHHHTTBSEEEECS
T ss_pred ccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCC-HhHHHhcCCceEecChhHHhcCCCEEEEee
Confidence 45899999999987 6788999999999999999998542 2222222 5566678899999999999998
Q ss_pred CCChhhhccccHHHH-hcCCCCCEEEEcCCC
Q 021995 182 PLTEKTRGMFDKDRI-AKMKKGVLIVNNARG 211 (304)
Q Consensus 182 p~~~~t~~~i~~~~l-~~mk~g~ilVn~~rg 211 (304)
...+ . .-++-+.+ +.|+ ..+++|+ |+
T Consensus 397 ~~~~-f-~~~d~~~~~~~~~-~~~i~D~-r~ 423 (446)
T 4a7p_A 397 EWDA-F-RALDLTRIKNSLK-SPVLVDL-RN 423 (446)
T ss_dssp CCTT-T-TSCCHHHHHTTBS-SCBEECS-SC
T ss_pred CCHH-h-hcCCHHHHHHhcC-CCEEEEC-CC
Confidence 7543 2 22444444 4465 4678885 54
No 303
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=97.12 E-value=0.00033 Score=65.20 Aligned_cols=89 Identities=15% Similarity=0.047 Sum_probs=66.9
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHh----hcC--cCCEEEEcCCCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDT----MLP--KCDIVVVNTPLT 184 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~e----ll~--~aDvVi~~~p~~ 184 (304)
.|++|.|+|.|.+|...++.++.+|++|++.++++.+.+.++++|+... .++.+ +.. ..|+|+-++..
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g~- 267 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGG- 267 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETTS-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCCh-
Confidence 5889999999999999999999999999999987666677777776432 22222 222 58888888762
Q ss_pred hhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 185 EKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 185 ~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
+ .-...++.++++..+|.++.
T Consensus 268 ~-----~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 268 A-----GLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp S-----CHHHHHHHEEEEEEEEEECC
T ss_pred H-----HHHHHHHHhhcCCEEEEEec
Confidence 1 12567788888888888863
No 304
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=97.11 E-value=0.00069 Score=63.94 Aligned_cols=92 Identities=18% Similarity=0.195 Sum_probs=67.7
Q ss_pred cCCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHHHhcCceec-----CCHHh----hc--CcCCEEEEcCC
Q 021995 115 LEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-----EDLDT----ML--PKCDIVVVNTP 182 (304)
Q Consensus 115 L~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-----~~l~e----ll--~~aDvVi~~~p 182 (304)
-.|.+|.|+|.|.+|...++.++.+|+ +|++.++++.+.+.++++|+..+ .++.+ +. ...|+++-++.
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g 291 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATG 291 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCC
Confidence 368899999999999999999999999 89999987767777888886432 22222 22 25999999887
Q ss_pred CChhhhccccHHHHhcC----CCCCEEEEcCC
Q 021995 183 LTEKTRGMFDKDRIAKM----KKGVLIVNNAR 210 (304)
Q Consensus 183 ~~~~t~~~i~~~~l~~m----k~g~ilVn~~r 210 (304)
....+. ...++.+ +++..++.++-
T Consensus 292 ~~~~~~----~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 292 VPQLVW----PQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CHHHHH----HHHHHHHHHCSCCCCEEEECSC
T ss_pred CcHHHH----HHHHHHHHhccCCCcEEEEeCC
Confidence 542221 2334444 99999999874
No 305
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.10 E-value=0.00031 Score=61.00 Aligned_cols=97 Identities=19% Similarity=0.116 Sum_probs=62.6
Q ss_pred cCCCEEEEEe-eChhhHHHHHHhccCC-CeEEEEcCCCCChhHHHhcCce-------ecCCHHhhcCcCCEEEEcCCCCh
Q 021995 115 LEGKTVGTVG-CGRIGKLLLQRLKPFN-CNLLYHDRVKMDPQLEKETGAK-------FEEDLDTMLPKCDIVVVNTPLTE 185 (304)
Q Consensus 115 L~g~~vgIIG-~G~IG~~lA~~l~~~G-~~V~~~dr~~~~~~~~~~~g~~-------~~~~l~ell~~aDvVi~~~p~~~ 185 (304)
...++|.|.| .|.||+.+++.|...| ++|++++|++.........++. ..++++++++++|+|+.+.....
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~ 100 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED 100 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTT
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCc
Confidence 4567999999 6999999999999999 8999999875322211111211 12345678899999998776433
Q ss_pred hhhccccHHHHhcCCC--CCEEEEcCCCch
Q 021995 186 KTRGMFDKDRIAKMKK--GVLIVNNARGAI 213 (304)
Q Consensus 186 ~t~~~i~~~~l~~mk~--g~ilVn~~rg~~ 213 (304)
.. ......++.|++ ...||+++....
T Consensus 101 ~~--~~~~~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 101 LD--IQANSVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp HH--HHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred hh--HHHHHHHHHHHHcCCCEEEEEeccee
Confidence 21 112344555532 257889887443
No 306
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=97.10 E-value=0.0073 Score=57.41 Aligned_cols=109 Identities=18% Similarity=0.241 Sum_probs=71.8
Q ss_pred ccccCCCEEEEEeeChhhHHHHHHhcc-CCCeEE-EEcCC-------CCChhHHHh----cC-------ceecCCHHhhc
Q 021995 112 AYDLEGKTVGTVGCGRIGKLLLQRLKP-FNCNLL-YHDRV-------KMDPQLEKE----TG-------AKFEEDLDTML 171 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~IG~~lA~~l~~-~G~~V~-~~dr~-------~~~~~~~~~----~g-------~~~~~~l~ell 171 (304)
+.++.|++|.|.|+|++|+.+++.|.. .|.+|+ +.|.+ ....+...+ .+ .+.. +.++++
T Consensus 204 g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~-~~~eil 282 (415)
T 2tmg_A 204 GIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERI-TNEELL 282 (415)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEE-CHHHHT
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEc-Cchhhh
Confidence 447899999999999999999999998 999987 44442 222222211 11 1222 345554
Q ss_pred -CcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 172 -PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 172 -~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
..||+++-|... +.++.+....++ -.+++-.+.+++ . .+-.+.|.+..+.
T Consensus 283 ~~~~DIliP~A~~-----n~i~~~~a~~l~-ak~V~EgAN~p~-t-~~a~~~l~~~Gi~ 333 (415)
T 2tmg_A 283 ELDVDILVPAALE-----GAIHAGNAERIK-AKAVVEGANGPT-T-PEADEILSRRGIL 333 (415)
T ss_dssp TCSCSEEEECSST-----TSBCHHHHTTCC-CSEEECCSSSCB-C-HHHHHHHHHTTCE
T ss_pred cCCCcEEEecCCc-----CccCcccHHHcC-CeEEEeCCCccc-C-HHHHHHHHHCCCE
Confidence 479999988753 466777777773 456666667775 3 3334556666665
No 307
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=97.10 E-value=0.00058 Score=63.00 Aligned_cols=91 Identities=16% Similarity=0.113 Sum_probs=67.6
Q ss_pred CCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec------CCHHhhcC-----cCCEEEEcCCC
Q 021995 116 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE------EDLDTMLP-----KCDIVVVNTPL 183 (304)
Q Consensus 116 ~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~------~~l~ell~-----~aDvVi~~~p~ 183 (304)
.|++|.|+|. |.||..+++.++..|++|++.+++....+.+++.|.... +++.+.+. ..|+++.+...
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 5789999999 899999999999999999999987766666666665321 23333332 47999888763
Q ss_pred ChhhhccccHHHHhcCCCCCEEEEcCCC
Q 021995 184 TEKTRGMFDKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~mk~g~ilVn~~rg 211 (304)
.+. -...++.|+++..+|+++..
T Consensus 249 ~~~-----~~~~~~~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 249 EAA-----IEASTRYVRANGTTVLVGMP 271 (347)
T ss_dssp HHH-----HHHHTTSEEEEEEEEECCCC
T ss_pred HHH-----HHHHHHHHhcCCEEEEEeCC
Confidence 222 25667888999999998753
No 308
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=97.10 E-value=0.0013 Score=59.87 Aligned_cols=92 Identities=20% Similarity=0.154 Sum_probs=60.7
Q ss_pred CEEEEEeeChhhHHHHHHhccCCC--eEEEEcCCCCChh-----HHHh---c--C--ceecCCHHhhcCcCCEEEEcCCC
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-----LEKE---T--G--AKFEEDLDTMLPKCDIVVVNTPL 183 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~--~V~~~dr~~~~~~-----~~~~---~--g--~~~~~~l~ell~~aDvVi~~~p~ 183 (304)
++|+|||.|.+|..+|..|...|. +|..||+++...+ .... + . +....+ .+.+++||+|+++.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 489999999999999999987777 8999998753221 0011 1 1 222345 7889999999998753
Q ss_pred C--h-hhh-ccc--cH-------HHHhcCCCCCEEEEcCC
Q 021995 184 T--E-KTR-GMF--DK-------DRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 184 ~--~-~t~-~~i--~~-------~~l~~mk~g~ilVn~~r 210 (304)
. + .++ .++ |. +.+....|++++++++.
T Consensus 80 ~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN 119 (294)
T 1oju_A 80 ARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 2 1 111 111 11 23344578999999984
No 309
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=97.10 E-value=0.0057 Score=56.98 Aligned_cols=131 Identities=18% Similarity=0.227 Sum_probs=90.5
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEeeC--hhhHHHHH
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCG--RIGKLLLQ 134 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G--~IG~~lA~ 134 (304)
.++-.+|+|.|.-+....++ .+|+-++.+.+++ + .+.|.+|+++|=| +++++++.
T Consensus 139 lA~~s~vPVINa~~~~~HPt--QaLaDl~Ti~E~~--------------------g-~l~gl~va~vGD~~~rva~Sl~~ 195 (359)
T 2w37_A 139 LARDSGVPVWNGLTDEWHPT--QMLADFMTVKENF--------------------G-KLQGLTLTFMGDGRNNVANSLLV 195 (359)
T ss_dssp HHHHSSSCEEEEECSSCCHH--HHHHHHHHHHHHH--------------------S-CCTTCEEEEESCTTSHHHHHHHH
T ss_pred HHHhCCCCEEcCCCCCCCcc--HHHHHHHHHHHHh--------------------C-CcCCeEEEEECCCccchHHHHHH
Confidence 45566899999765433332 2445555554421 1 4889999999986 99999999
Q ss_pred HhccCCCeEEEEcCCCC-Chh-H---H----HhcC--ceecCCHHhhcCcCCEEEEcCCC--C----hh-----hhcccc
Q 021995 135 RLKPFNCNLLYHDRVKM-DPQ-L---E----KETG--AKFEEDLDTMLPKCDIVVVNTPL--T----EK-----TRGMFD 192 (304)
Q Consensus 135 ~l~~~G~~V~~~dr~~~-~~~-~---~----~~~g--~~~~~~l~ell~~aDvVi~~~p~--~----~~-----t~~~i~ 192 (304)
.+..+|++|.+..|... +.+ . + ++.| +....++++.++++|+|....=. . ++ ...-++
T Consensus 196 ~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~ee~~er~~~~~~y~v~ 275 (359)
T 2w37_A 196 TGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTDVWVSMGESNWEERVKELTPYQVN 275 (359)
T ss_dssp HHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSCCTTCTTHHHHHHHHGGGCBC
T ss_pred HHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEcccccccccchHHHHHHhhccccC
Confidence 99999999999988642 222 2 1 1445 44568999999999999874420 1 00 124568
Q ss_pred HHHHhcCC---CCCEEEEcCC
Q 021995 193 KDRIAKMK---KGVLIVNNAR 210 (304)
Q Consensus 193 ~~~l~~mk---~g~ilVn~~r 210 (304)
.+.++.+| ++++|..+.-
T Consensus 276 ~ell~~ak~~~~dai~MHcLP 296 (359)
T 2w37_A 276 MEAMKKTGTPDDQLIFMHCLP 296 (359)
T ss_dssp HHHHHTTCCCGGGCEEEECSC
T ss_pred HHHHHhhCCCCCCEEEECCCC
Confidence 88999898 8999988863
No 310
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=97.09 E-value=0.00037 Score=65.09 Aligned_cols=90 Identities=24% Similarity=0.295 Sum_probs=68.0
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHHHhcCceec-----CCHHhhcC--------cCCEEEEcC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-----EDLDTMLP--------KCDIVVVNT 181 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell~--------~aDvVi~~~ 181 (304)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++.+.+.++++|+... .++.+.+. ..|+|+-++
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~ 261 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECA 261 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECC
Confidence 58899999999999999999999999 89999987766777778886432 23333222 489998887
Q ss_pred CCChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 182 PLTEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 182 p~~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
...+. -...++.++++..+|.++-
T Consensus 262 G~~~~-----~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 262 GVAET-----VKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp CCHHH-----HHHHHHHEEEEEEEEECSC
T ss_pred CCHHH-----HHHHHHHhccCCEEEEEec
Confidence 63221 2567788899999998874
No 311
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=97.08 E-value=0.00061 Score=61.92 Aligned_cols=87 Identities=15% Similarity=0.152 Sum_probs=65.1
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-CCHHhhcCcCCEEEEcCCCChhhhccccHH
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-EDLDTMLPKCDIVVVNTPLTEKTRGMFDKD 194 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-~~l~ell~~aDvVi~~~p~~~~t~~~i~~~ 194 (304)
.|++|.|+|.|.+|...++.++.+|++|++.+ ++.+.+.++++|+... .+.+++-...|+++-++... .+ ..
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v~~g~Dvv~d~~g~~-~~-----~~ 214 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNSQ-NA-----AA 214 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGCCSCEEEEECC-------------T
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHhCCCccEEEECCCch-hH-----HH
Confidence 68899999999999999999999999999999 7778888888887532 22333345689998877632 11 34
Q ss_pred HHhcCCCCCEEEEcC
Q 021995 195 RIAKMKKGVLIVNNA 209 (304)
Q Consensus 195 ~l~~mk~g~ilVn~~ 209 (304)
.++.++++..+|.++
T Consensus 215 ~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 215 LVPSLKANGHIICIQ 229 (315)
T ss_dssp TGGGEEEEEEEEEEC
T ss_pred HHHHhcCCCEEEEEe
Confidence 577888999888885
No 312
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=97.08 E-value=0.00052 Score=66.59 Aligned_cols=115 Identities=15% Similarity=0.154 Sum_probs=72.2
Q ss_pred CCEEEEEeeChh--hHHHHHHhc---cC-CCeEEEEcCCCCChhHHH--------hc----CceecCCHHhhcCcCCEEE
Q 021995 117 GKTVGTVGCGRI--GKLLLQRLK---PF-NCNLLYHDRVKMDPQLEK--------ET----GAKFEEDLDTMLPKCDIVV 178 (304)
Q Consensus 117 g~~vgIIG~G~I--G~~lA~~l~---~~-G~~V~~~dr~~~~~~~~~--------~~----g~~~~~~l~ell~~aDvVi 178 (304)
.++|+|||.|.+ |.+++..|. ++ |.+|..||++....+... .. .+....++++.+++||+|+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 468999999997 455565553 33 889999999753222111 11 1233468888899999999
Q ss_pred EcCCCCh---------------------hhh-------cc--------ccH---HHHhcCCCCCEEEEcCCCchhchHHH
Q 021995 179 VNTPLTE---------------------KTR-------GM--------FDK---DRIAKMKKGVLIVNNARGAIMDTQAV 219 (304)
Q Consensus 179 ~~~p~~~---------------------~t~-------~~--------i~~---~~l~~mk~g~ilVn~~rg~~vd~~aL 219 (304)
+++|... +|. ++ +-. +.+....|++++||++..--+-+.++
T Consensus 83 iaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~~~ 162 (480)
T 1obb_A 83 NTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLV 162 (480)
T ss_dssp ECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHHHH
T ss_pred ECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH
Confidence 9997410 110 00 001 22344468999999998766666666
Q ss_pred HHHHHcCCceEEE
Q 021995 220 VDACSSGHIAGYS 232 (304)
Q Consensus 220 ~~aL~~g~i~ga~ 232 (304)
.+ +...++.|.+
T Consensus 163 ~k-~p~~rviG~c 174 (480)
T 1obb_A 163 TR-TVPIKAVGFC 174 (480)
T ss_dssp HH-HSCSEEEEEC
T ss_pred HH-CCCCcEEecC
Confidence 55 5566666653
No 313
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.08 E-value=0.0003 Score=66.14 Aligned_cols=67 Identities=19% Similarity=0.271 Sum_probs=52.5
Q ss_pred CEEEEEeeC-hhhHHHHHHhccC-CCeEE-EEcCCCCCh-hHHHhcCceecCCHHhhcCc--CCEEEEcCCCC
Q 021995 118 KTVGTVGCG-RIGKLLLQRLKPF-NCNLL-YHDRVKMDP-QLEKETGAKFEEDLDTMLPK--CDIVVVNTPLT 184 (304)
Q Consensus 118 ~~vgIIG~G-~IG~~lA~~l~~~-G~~V~-~~dr~~~~~-~~~~~~g~~~~~~l~ell~~--aDvVi~~~p~~ 184 (304)
.+|||||+| .+|+..+..+... +++++ ++|+++... +.++++|+..+.++++++++ .|+|++++|..
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~ 75 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQ 75 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGG
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcH
Confidence 489999999 9999999888764 67765 778865433 34456688778899999874 99999999954
No 314
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=97.06 E-value=0.00084 Score=61.99 Aligned_cols=96 Identities=16% Similarity=0.085 Sum_probs=60.6
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCC--eEEEEcCCCCChhH----HHh------cCceecCCHHhhcCcCCEEEEcCCCC
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQL----EKE------TGAKFEEDLDTMLPKCDIVVVNTPLT 184 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~--~V~~~dr~~~~~~~----~~~------~g~~~~~~l~ell~~aDvVi~~~p~~ 184 (304)
.++|+|||.|.||..+|..|...|. +|..+|++..+.+. ... .++....+..+.+++||+|+++.+..
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~p 84 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGAN 84 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEecccC
Confidence 5689999999999999999987776 89999986432221 111 11222223346789999999987532
Q ss_pred --hh-hh-ccc--c----H---HHHhcCCCCCEEEEcCCCc
Q 021995 185 --EK-TR-GMF--D----K---DRIAKMKKGVLIVNNARGA 212 (304)
Q Consensus 185 --~~-t~-~~i--~----~---~~l~~mk~g~ilVn~~rg~ 212 (304)
+. ++ .++ | + +.+....|++++++++..-
T Consensus 85 ~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPv 125 (326)
T 3pqe_A 85 QKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPV 125 (326)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChH
Confidence 11 11 111 1 1 1233346899999998543
No 315
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.05 E-value=0.00027 Score=62.69 Aligned_cols=92 Identities=21% Similarity=0.183 Sum_probs=61.7
Q ss_pred cccCCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCC-------------------CChhHHH----hc--Cc--ee-
Q 021995 113 YDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVK-------------------MDPQLEK----ET--GA--KF- 163 (304)
Q Consensus 113 ~~L~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~-------------------~~~~~~~----~~--g~--~~- 163 (304)
..|.+++|.|||+|.+|..+++.|...|. +++++|++. .+.+.+. +. .+ ..
T Consensus 27 ~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 106 (249)
T 1jw9_B 27 EALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV 106 (249)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence 36889999999999999999999999997 799999875 1222111 11 11 11
Q ss_pred ---c--CCHHhhcCcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEc
Q 021995 164 ---E--EDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNN 208 (304)
Q Consensus 164 ---~--~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~ 208 (304)
. ++++++++++|+|+.+++ +.+++..+++...+. +.-+|+.
T Consensus 107 ~~~~~~~~~~~~~~~~DvVi~~~d-~~~~~~~l~~~~~~~---~~p~i~~ 152 (249)
T 1jw9_B 107 NALLDDAELAALIAEHDLVLDCTD-NVAVRNQLNAGCFAA---KVPLVSG 152 (249)
T ss_dssp CSCCCHHHHHHHHHTSSEEEECCS-SHHHHHHHHHHHHHH---TCCEEEE
T ss_pred eccCCHhHHHHHHhCCCEEEEeCC-CHHHHHHHHHHHHHc---CCCEEEe
Confidence 1 134567888999998886 456666666554442 3335554
No 316
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=97.05 E-value=0.0094 Score=55.46 Aligned_cols=142 Identities=11% Similarity=0.127 Sum_probs=87.8
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCccc-ccccccccccCCCEEEEEeeC-hhhHHHHH
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNV-AGVAYRAYDLEGKTVGTVGCG-RIGKLLLQ 134 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~-~~~~~~~~~L~g~~vgIIG~G-~IG~~lA~ 134 (304)
.++..+|+|.|.-+....++ .+|+-++.+.+++ |.+.. .........|.|.+|++||=+ ++.++++.
T Consensus 138 lA~~s~vPVINag~d~~HPt--QaLaDl~TI~E~~---------G~~~~~~~~~~~~~~l~glkva~vGD~~nva~Sl~~ 206 (353)
T 3sds_A 138 LAKHSSVPVINALCDTFHPL--QAIADFLTIHESF---------ASQSATHGTHPSSLGLEGLKIAWVGDANNVLFDLAI 206 (353)
T ss_dssp HHHHCSSCEEEEECSSCCHH--HHHHHHHHHHHHT---------C--------CTTCCSCTTCEEEEESCCCHHHHHHHH
T ss_pred HHhhCCCCEEECCCCCCCcH--HHHHHHHHHHHHh---------CCCcccccccccccccCCCEEEEECCCchHHHHHHH
Confidence 45668899999854332221 2344445554432 11100 000112345899999999965 58888888
Q ss_pred HhccCCCeEEEEcCCCC--ChhHHH---hc--------CceecCCHHhhcCcCCEEEEcC--CCChh----------hhc
Q 021995 135 RLKPFNCNLLYHDRVKM--DPQLEK---ET--------GAKFEEDLDTMLPKCDIVVVNT--PLTEK----------TRG 189 (304)
Q Consensus 135 ~l~~~G~~V~~~dr~~~--~~~~~~---~~--------g~~~~~~l~ell~~aDvVi~~~--p~~~~----------t~~ 189 (304)
.+..+|++|.+..|... +.+... +. ++....++++.++++|+|..-. +...+ ...
T Consensus 207 ~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvytd~w~smg~E~~~~~r~~~~~~y 286 (353)
T 3sds_A 207 AATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIVTDTWISMGQETEKIKRLEAFKDF 286 (353)
T ss_dssp HHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEEECCC--------CHHHHHHTTTC
T ss_pred HHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEEeCCccCCchhhHHHHHHHHhhCc
Confidence 89999999999988653 222211 11 3445679999999999998743 21111 113
Q ss_pred cccHHHHhc--CCCCCEEEEcC
Q 021995 190 MFDKDRIAK--MKKGVLIVNNA 209 (304)
Q Consensus 190 ~i~~~~l~~--mk~g~ilVn~~ 209 (304)
-++.+.++. +|++++|..+.
T Consensus 287 ~vt~ell~~~~ak~~ai~MHcL 308 (353)
T 3sds_A 287 KVTSELAKRGGAKENWKFMHCL 308 (353)
T ss_dssp CBCHHHHHHHTCCTTCEEEECS
T ss_pred eecHHHHhhcccCCCcEEECCC
Confidence 578888888 88899888775
No 317
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=97.05 E-value=0.0003 Score=64.84 Aligned_cols=90 Identities=17% Similarity=0.155 Sum_probs=67.0
Q ss_pred CCCEEEEEeeChhhHHHHHHhccC--CCeEEEEcCCCCChhHHHhcCceecCCHH-------hhcC--cCCEEEEcCCCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPF--NCNLLYHDRVKMDPQLEKETGAKFEEDLD-------TMLP--KCDIVVVNTPLT 184 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~~~l~-------ell~--~aDvVi~~~p~~ 184 (304)
.|++|.|+|.|.+|...++.++.+ |++|++.++++.+.+.++++|+..+-+.. ++.. ..|+|+-++...
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~~ 249 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTE 249 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCCh
Confidence 789999999999999999999998 99999999876666677777864322221 2221 579998888642
Q ss_pred hhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 185 EKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 185 ~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
+. -...++.++++..+|.++.
T Consensus 250 ~~-----~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 250 ET-----TYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp HH-----HHHHHHHEEEEEEEEECCC
T ss_pred HH-----HHHHHHHhhcCCEEEEeCC
Confidence 12 1466778888888888863
No 318
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.04 E-value=0.00048 Score=65.93 Aligned_cols=67 Identities=13% Similarity=0.109 Sum_probs=51.6
Q ss_pred CEEEEEee----ChhhHHHHHHhccC--CCeE-EEEcCCCCChh-HHHhcCce---ecCCHHhhcC--cCCEEEEcCCCC
Q 021995 118 KTVGTVGC----GRIGKLLLQRLKPF--NCNL-LYHDRVKMDPQ-LEKETGAK---FEEDLDTMLP--KCDIVVVNTPLT 184 (304)
Q Consensus 118 ~~vgIIG~----G~IG~~lA~~l~~~--G~~V-~~~dr~~~~~~-~~~~~g~~---~~~~l~ell~--~aDvVi~~~p~~ 184 (304)
.+|||||+ |.||+..++.++.. ++++ .++|+++...+ .++.+|+. .+.+++++++ +.|+|++++|..
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 100 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQVA 100 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSCHH
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCCcH
Confidence 58999999 99999999999876 7886 47888654332 34455653 6679999986 699999999954
No 319
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.03 E-value=0.00048 Score=65.14 Aligned_cols=68 Identities=19% Similarity=0.287 Sum_probs=50.5
Q ss_pred CEEEEEeeChhhHHHHHHhccC---------CCeEE-EEcCCCCCh-hHHHhcCc-eecCCHHhhcC--cCCEEEEcCCC
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF---------NCNLL-YHDRVKMDP-QLEKETGA-KFEEDLDTMLP--KCDIVVVNTPL 183 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~---------G~~V~-~~dr~~~~~-~~~~~~g~-~~~~~l~ell~--~aDvVi~~~p~ 183 (304)
.+|||||+|.||+..++.++.. +++|+ ++|+++... +.+++++. ..+.+++++++ +.|+|++++|.
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp~ 106 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSPN 106 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCCc
Confidence 3899999999999888877643 45655 678865433 34456676 46789999985 58999999995
Q ss_pred Ch
Q 021995 184 TE 185 (304)
Q Consensus 184 ~~ 185 (304)
..
T Consensus 107 ~~ 108 (412)
T 4gqa_A 107 HL 108 (412)
T ss_dssp GG
T ss_pred HH
Confidence 43
No 320
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=97.02 E-value=0.0017 Score=59.45 Aligned_cols=130 Identities=21% Similarity=0.317 Sum_probs=86.5
Q ss_pred HHHhCCcEEEEcC-CCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEee---ChhhHHH
Q 021995 57 AAAAAGLTVAEVT-GSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGC---GRIGKLL 132 (304)
Q Consensus 57 ~~~~~gI~v~n~~-g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~---G~IG~~l 132 (304)
.++-.+++|.|.- |....++ .+|+-++.+.+++ | .+.|.+|+++|= |++.+++
T Consensus 117 la~~~~vPVINag~g~~~HPt--Q~LaDl~Ti~e~~--------------------g-~l~gl~va~vGD~~~~rva~Sl 173 (308)
T 1ml4_A 117 AAEVAEVPVINAGDGSNQHPT--QTLLDLYTIKKEF--------------------G-RIDGLKIGLLGDLKYGRTVHSL 173 (308)
T ss_dssp HHHTCSSCEEEEEETTSCCHH--HHHHHHHHHHHHS--------------------S-CSSSEEEEEESCTTTCHHHHHH
T ss_pred HHHhCCCCEEeCccCCccCcH--HHHHHHHHHHHHh--------------------C-CCCCeEEEEeCCCCcCchHHHH
Confidence 3455679999963 3332222 2344445554421 1 478999999997 5899999
Q ss_pred HHHhccCCCeEEEEcCCCC-Chh-H---HHhcCc--eecCCHHhhcCcCCEEEEcCCCC------hhh-----hccccHH
Q 021995 133 LQRLKPFNCNLLYHDRVKM-DPQ-L---EKETGA--KFEEDLDTMLPKCDIVVVNTPLT------EKT-----RGMFDKD 194 (304)
Q Consensus 133 A~~l~~~G~~V~~~dr~~~-~~~-~---~~~~g~--~~~~~l~ell~~aDvVi~~~p~~------~~t-----~~~i~~~ 194 (304)
+..+..+|++|.+..|... +.+ . +++.|. ....++++.++++|+|....-.. ++. ..-++.+
T Consensus 174 ~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~ 253 (308)
T 1ml4_A 174 AEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQKERFPDEQEYLKVKGSYQVNLK 253 (308)
T ss_dssp HHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCCGGGSSSHHHHHTTTTCCCBCTT
T ss_pred HHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCccccccCCHHHHHHHhcCcccCHH
Confidence 9999999999999988642 222 1 223354 34578999999999998754321 111 2346778
Q ss_pred HHhcCCCCCEEEEcC
Q 021995 195 RIAKMKKGVLIVNNA 209 (304)
Q Consensus 195 ~l~~mk~g~ilVn~~ 209 (304)
.++.+|++++|..+.
T Consensus 254 ll~~a~~~ai~mH~l 268 (308)
T 1ml4_A 254 VLEKAKDELRIMHPL 268 (308)
T ss_dssp GGGGSCTTCEEECCS
T ss_pred HHhhcCCCCEEECCC
Confidence 888888888887764
No 321
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=97.02 E-value=0.0028 Score=58.40 Aligned_cols=104 Identities=15% Similarity=0.217 Sum_probs=64.8
Q ss_pred cCCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChh-----HHHh-----cC--ceecCCHHhhcCcCCEEEEcC
Q 021995 115 LEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQ-----LEKE-----TG--AKFEEDLDTMLPKCDIVVVNT 181 (304)
Q Consensus 115 L~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~-----~~~~-----~g--~~~~~~l~ell~~aDvVi~~~ 181 (304)
+..++|+|||.|.+|..+|..|...|+ +|..+|+++...+ .... .. +....+. +.+++||+|+++.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaa 83 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTA 83 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECC
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEcc
Confidence 456799999999999999999987777 9999999764332 1111 11 2223455 7899999999986
Q ss_pred CCC--hh-hhc-cc--cH-------HHHhcCCCCCEEEEcCCCchhchHHH
Q 021995 182 PLT--EK-TRG-MF--DK-------DRIAKMKKGVLIVNNARGAIMDTQAV 219 (304)
Q Consensus 182 p~~--~~-t~~-~i--~~-------~~l~~mk~g~ilVn~~rg~~vd~~aL 219 (304)
+.. +. ++. ++ |. +.+....|++++++++..-=+....+
T Consensus 84 g~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPvd~~t~~~ 134 (324)
T 3gvi_A 84 GVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPLDAMVWAL 134 (324)
T ss_dssp SCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH
T ss_pred CcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCcHHHHHHH
Confidence 432 11 110 11 11 12223358999999986443333333
No 322
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=97.00 E-value=0.0022 Score=58.85 Aligned_cols=95 Identities=12% Similarity=0.159 Sum_probs=60.7
Q ss_pred CEEEEEeeChhhHHHHHHhccCCC--eEEEEcCCCCChhH-HHh---------cCceec-CCHHhhcCcCCEEEEcCCCC
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQL-EKE---------TGAKFE-EDLDTMLPKCDIVVVNTPLT 184 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~--~V~~~dr~~~~~~~-~~~---------~g~~~~-~~l~ell~~aDvVi~~~p~~ 184 (304)
++|+|||.|.||..+|..+...|. +|..+|+++...+. +.+ ...... .+..+.+++||+|+++.+..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 489999999999999998876666 89999997643221 101 012211 24567899999999997543
Q ss_pred hh-----------hhcccc--HHHHhcCCCCCEEEEcCCCc
Q 021995 185 EK-----------TRGMFD--KDRIAKMKKGVLIVNNARGA 212 (304)
Q Consensus 185 ~~-----------t~~~i~--~~~l~~mk~g~ilVn~~rg~ 212 (304)
.. +..++. .+.+....|++++++++..-
T Consensus 81 ~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 121 (314)
T 3nep_X 81 RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPL 121 (314)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSH
T ss_pred CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCch
Confidence 21 111110 12234456899999998543
No 323
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=97.00 E-value=0.0005 Score=63.56 Aligned_cols=89 Identities=20% Similarity=0.166 Sum_probs=67.4
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHHHhcCceec-----CCHHh----hcC--cCCEEEEcCCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-----EDLDT----MLP--KCDIVVVNTPL 183 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-----~~l~e----ll~--~aDvVi~~~p~ 183 (304)
.|++|.|+|.|.+|...++.++..|+ +|++.++++.+.+.++++|+..+ .++.+ +.. ..|+++-++..
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~ 245 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGD 245 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 58899999999999999999999999 79999987666677788886432 12222 222 48999888764
Q ss_pred ChhhhccccHHHHhcCCCCCEEEEcC
Q 021995 184 TEKTRGMFDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~mk~g~ilVn~~ 209 (304)
.+. -...++.++++..++.++
T Consensus 246 ~~~-----~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 246 VHT-----FAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TTH-----HHHHHHHEEEEEEEEECC
T ss_pred hHH-----HHHHHHHHhcCCEEEEec
Confidence 322 256778889999998886
No 324
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.97 E-value=0.0021 Score=59.18 Aligned_cols=95 Identities=16% Similarity=0.193 Sum_probs=60.4
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChh-HHHh---------cC--ceecCCHHhhcCcCCEEEEcCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQ-LEKE---------TG--AKFEEDLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~-~~~~---------~g--~~~~~~l~ell~~aDvVi~~~p 182 (304)
..++|+|||.|.+|..+|..+...|. +|..+|+++...+ .+.+ .. +....+ .+.+++||+|+++.+
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d-~~a~~~aDvVIi~ag 82 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND-YKDLENSDVVIVTAG 82 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC-GGGGTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC-HHHHCCCCEEEEcCC
Confidence 45799999999999999999876666 9999999764322 1111 01 122234 478999999999864
Q ss_pred CC--hh---------hhccccH--HHHhcCCCCCEEEEcCCC
Q 021995 183 LT--EK---------TRGMFDK--DRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 183 ~~--~~---------t~~~i~~--~~l~~mk~g~ilVn~~rg 211 (304)
.. +. +..++.. +.+....|++++++++..
T Consensus 83 ~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNP 124 (321)
T 3p7m_A 83 VPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNP 124 (321)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred cCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCc
Confidence 32 11 1111100 122333588999999643
No 325
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=96.97 E-value=0.0095 Score=54.91 Aligned_cols=137 Identities=14% Similarity=0.092 Sum_probs=89.5
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEeeC--hhhHHHHH
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCG--RIGKLLLQ 134 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G--~IG~~lA~ 134 (304)
.++..+|+|.|.-.....++ .+|+=++.+.+++.. .+ .....+.|.+|+++|=| ++.++++.
T Consensus 117 lA~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~g~------~~--------~~~~~l~gl~va~vGD~~~~va~Sl~~ 180 (328)
T 3grf_A 117 MAQHASVPCINALDDFGHPL--QMVCDFMTIKEKFTA------AG--------EFSNGFKGIKFAYCGDSMNNVTYDLMR 180 (328)
T ss_dssp HHHHCSSCEEESSCSSCCHH--HHHHHHHHHHHHHHH------TT--------CCTTTGGGCCEEEESCCSSHHHHHHHH
T ss_pred HHHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHhCC------cc--------ccccccCCcEEEEeCCCCcchHHHHHH
Confidence 45668899999755433332 234445555443210 00 01125899999999975 89999999
Q ss_pred HhccCCCeEEEEcCCCC---Chh-H---HH----h--cC--ceecCCHHhhcCcCCEEEEcC----C-CCh--------h
Q 021995 135 RLKPFNCNLLYHDRVKM---DPQ-L---EK----E--TG--AKFEEDLDTMLPKCDIVVVNT----P-LTE--------K 186 (304)
Q Consensus 135 ~l~~~G~~V~~~dr~~~---~~~-~---~~----~--~g--~~~~~~l~ell~~aDvVi~~~----p-~~~--------~ 186 (304)
.+..+|++|.+..|... +.+ . ++ + .| +....++++.++++|+|...+ . ..+ -
T Consensus 181 ~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvytd~W~sm~iq~er~~~~~~~~ 260 (328)
T 3grf_A 181 GCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDVVYTDSWMSYHITKEQKEARLKVL 260 (328)
T ss_dssp HHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSEEEECCCC--------CCTHHHHH
T ss_pred HHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCCEEEecCccccCCcHHHHHHHHHHh
Confidence 99999999999988542 221 1 11 2 34 345679999999999998642 2 111 0
Q ss_pred hhccccHHHHhcCCCCCEEEEcC
Q 021995 187 TRGMFDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 187 t~~~i~~~~l~~mk~g~ilVn~~ 209 (304)
...-++.+.++.+|++++|..+.
T Consensus 261 ~~y~vt~~~l~~a~~~ai~mH~l 283 (328)
T 3grf_A 261 TPFQVDDAVMAVTSKRSIFMNCL 283 (328)
T ss_dssp GGGCBCHHHHTTSCTTCEEEECS
T ss_pred cCCCCCHHHHHhcCCCCEEECCC
Confidence 12347889999999999998875
No 326
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.95 E-value=0.0077 Score=57.32 Aligned_cols=109 Identities=14% Similarity=0.242 Sum_probs=72.6
Q ss_pred ccccCCCEEEEEeeChhhHHHHHHhccCCCeEE-EEcCC-------CCChhHHHhc----C------ceecCCHHhh-cC
Q 021995 112 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRV-------KMDPQLEKET----G------AKFEEDLDTM-LP 172 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~-~~dr~-------~~~~~~~~~~----g------~~~~~~l~el-l~ 172 (304)
+.++.|+||.|.|+|++|+.+|+.|...|.+|+ +.|.+ ....+...++ | .+.. +.+++ -.
T Consensus 216 g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~-~~~~i~~~ 294 (424)
T 3k92_A 216 GIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVI-TNEELLEK 294 (424)
T ss_dssp TCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCB-CHHHHHHS
T ss_pred CCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEe-cCccceec
Confidence 447899999999999999999999999999975 45544 2222222221 1 2222 33443 35
Q ss_pred cCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 173 KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 173 ~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
.||+++-|.. .+.|+.+....++ -.+++-.+.+++ . .+..+.|.+..|.
T Consensus 295 ~~DIliPcA~-----~n~I~~~~a~~l~-ak~V~EgAN~p~-t-~eA~~iL~~rGI~ 343 (424)
T 3k92_A 295 DCDILVPAAI-----SNQITAKNAHNIQ-ASIVVERANGPT-T-IDATKILNERGVL 343 (424)
T ss_dssp CCSEEEECSC-----SSCBCTTTGGGCC-CSEEECCSSSCB-C-HHHHHHHHHTTCE
T ss_pred cccEEeecCc-----ccccChhhHhhcC-ceEEEcCCCCCC-C-HHHHHHHHHCCCE
Confidence 7999998875 3566677666673 466777777775 3 4445667777665
No 327
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.95 E-value=0.0016 Score=59.80 Aligned_cols=116 Identities=16% Similarity=0.128 Sum_probs=68.8
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCC--CeEEEEcCCCCChhH-HHh---------cCceecCCHHhhcCcCCEEEEcCCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFN--CNLLYHDRVKMDPQL-EKE---------TGAKFEEDLDTMLPKCDIVVVNTPL 183 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G--~~V~~~dr~~~~~~~-~~~---------~g~~~~~~l~ell~~aDvVi~~~p~ 183 (304)
...+|+|||.|.+|..++..|...| .+|..+|.+....+. ..+ .......+..+.+++||+|+++.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~ 84 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGA 84 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCC
Confidence 3469999999999999999887656 489999986422211 111 1111112346779999999999864
Q ss_pred Chhh---h--------cccc--HHHHhcCCCCCEEEEcCCCchhchHHHHHH--HHcCCceEE
Q 021995 184 TEKT---R--------GMFD--KDRIAKMKKGVLIVNNARGAIMDTQAVVDA--CSSGHIAGY 231 (304)
Q Consensus 184 ~~~t---~--------~~i~--~~~l~~mk~g~ilVn~~rg~~vd~~aL~~a--L~~g~i~ga 231 (304)
.... + .++. .+.+....|++++++++..-=+....+.+. +...++.|.
T Consensus 85 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~k~~~~p~~rviG~ 147 (317)
T 3d0o_A 85 AQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPVDILAYATWKFSGLPKERVIGS 147 (317)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHhCCCHHHEEec
Confidence 3211 0 1110 012233478999999874433334444343 333456555
No 328
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.94 E-value=0.00044 Score=64.43 Aligned_cols=90 Identities=19% Similarity=0.125 Sum_probs=66.3
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHHHhcCceec-----CCHHhhc----C-cCCEEEEcCCCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-----EDLDTML----P-KCDIVVVNTPLT 184 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell----~-~aDvVi~~~p~~ 184 (304)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++.+.+.++++|+... .++.+.+ . ..|+|+-++...
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~ 269 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSP 269 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCCH
Confidence 58899999999999999999999999 69999987766677777776421 1222222 1 479998887632
Q ss_pred hhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 185 EKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 185 ~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
+. -...++.++++..+|.++-
T Consensus 270 ~~-----~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 270 EI-----LKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp HH-----HHHHHHTEEEEEEEEECCC
T ss_pred HH-----HHHHHHHHhcCCEEEEeCC
Confidence 21 1567788899988888864
No 329
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.94 E-value=0.00064 Score=58.91 Aligned_cols=67 Identities=18% Similarity=0.233 Sum_probs=47.4
Q ss_pred CCEEEEEeeChhhHHHHHH--hccCCCeEE-EEcCCCCChhH-HHhcCceecCCHHhhcC-cCCEEEEcCCCC
Q 021995 117 GKTVGTVGCGRIGKLLLQR--LKPFNCNLL-YHDRVKMDPQL-EKETGAKFEEDLDTMLP-KCDIVVVNTPLT 184 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~--l~~~G~~V~-~~dr~~~~~~~-~~~~g~~~~~~l~ell~-~aDvVi~~~p~~ 184 (304)
.++|+|||+|.+|+.+++. ... |++++ ++|.++..... .....+...++++++++ +.|+|++|+|..
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~Ps~ 151 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPRE 151 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSCHH
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCCch
Confidence 3589999999999999996 335 88855 66776543321 22223334678888887 589999999943
No 330
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=96.93 E-value=0.0083 Score=57.13 Aligned_cols=110 Identities=21% Similarity=0.319 Sum_probs=69.9
Q ss_pred ccccCCCEEEEEeeChhhHHHHHHhccCCCeEE-EEcCC-------CCChhHHHhc----Cc------------eecCCH
Q 021995 112 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRV-------KMDPQLEKET----GA------------KFEEDL 167 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~-~~dr~-------~~~~~~~~~~----g~------------~~~~~l 167 (304)
+.++.|++|.|.|+|++|+.++++|...|++|+ +.|.+ ....+...++ +. ..+.+.
T Consensus 205 g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~ 284 (421)
T 1v9l_A 205 WGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNP 284 (421)
T ss_dssp HSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSST
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCc
Confidence 447899999999999999999999999999987 44442 2122222221 11 112122
Q ss_pred Hhhc-CcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 168 DTML-PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 168 ~ell-~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
++++ ..||+++-|.- .+.|+.+..+.++ =.+++-.+.+++ . .+-.+.|.+..+.
T Consensus 285 ~~~~~~~~Dil~P~A~-----~~~I~~~~a~~l~-ak~V~EgAN~p~-t-~~a~~~l~~~Gi~ 339 (421)
T 1v9l_A 285 DAIFKLDVDIFVPAAI-----ENVIRGDNAGLVK-ARLVVEGANGPT-T-PEAERILYERGVV 339 (421)
T ss_dssp TGGGGCCCSEEEECSC-----SSCBCTTTTTTCC-CSEEECCSSSCB-C-HHHHHHHHTTTCE
T ss_pred hhhhcCCccEEEecCc-----CCccchhhHHHcC-ceEEEecCCCcC-C-HHHHHHHHHCCCE
Confidence 3443 47999988873 3455666666664 356666666665 3 3344667777666
No 331
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.92 E-value=0.00032 Score=59.19 Aligned_cols=89 Identities=13% Similarity=0.192 Sum_probs=60.5
Q ss_pred CCCEEEEEe-eChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-----CCH-H---hhc--CcCCEEEEcCCC
Q 021995 116 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDL-D---TML--PKCDIVVVNTPL 183 (304)
Q Consensus 116 ~g~~vgIIG-~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l-~---ell--~~aDvVi~~~p~ 183 (304)
.|++|.|+| .|.||..+++.++..|++|++.+++....+..++.|.... .+. + +.. ...|+++.+..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g- 116 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA- 116 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCC-
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCc-
Confidence 578999999 6999999999999999999999986544444445554211 111 1 112 24788877664
Q ss_pred ChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 184 TEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
.+. -...++.|+++..+|+++.
T Consensus 117 ~~~-----~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 117 GEA-----IQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp THH-----HHHHHHTEEEEEEEEECSC
T ss_pred hHH-----HHHHHHHhccCCEEEEEcC
Confidence 111 2566777888888888864
No 332
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=96.91 E-value=0.0077 Score=57.97 Aligned_cols=110 Identities=21% Similarity=0.266 Sum_probs=66.6
Q ss_pred ccccCCCEEEEEeeChhhHHHHHHhccCCCeEE-EEcC-------CCCChhHH------H--------hc-----Cceec
Q 021995 112 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDR-------VKMDPQLE------K--------ET-----GAKFE 164 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~-~~dr-------~~~~~~~~------~--------~~-----g~~~~ 164 (304)
+.+|.|+||.|-|+|++|+.+|+.|...|.+|+ +.|. .....+.. + .+ ++++.
T Consensus 247 G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v 326 (470)
T 2bma_A 247 NIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYF 326 (470)
T ss_dssp TCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEEC
T ss_pred cCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEe
Confidence 457899999999999999999999999999987 4443 23222211 0 00 22222
Q ss_pred CCHHh-hcCcCCEEEEcCCCChhhhccccHHHHhcC-CCCC-EEEEcCCCchhchHHHHHHHHcCCce
Q 021995 165 EDLDT-MLPKCDIVVVNTPLTEKTRGMFDKDRIAKM-KKGV-LIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 165 ~~l~e-ll~~aDvVi~~~p~~~~t~~~i~~~~l~~m-k~g~-ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
+. ++ +-..||+++-|.. .+.|+.+..+.+ ++++ +++-.+.+++ ..++ .+.|.+..|.
T Consensus 327 ~~-~~~~~~~~DI~iPcA~-----~~~I~~~na~~l~~~~ak~V~EgAN~p~-T~eA-~~~L~~rGIl 386 (470)
T 2bma_A 327 PN-EKPWGVPCTLAFPCAT-----QNDVDLDQAKLLQKNGCILVGEGANMPS-TVDA-INLFKSNNII 386 (470)
T ss_dssp SS-CCTTSSCCSEEEECSS-----TTCBCSHHHHHHHHTTCCEEECCSSSCB-CHHH-HHHHHHTTCE
T ss_pred cC-cCeeecCccEEEeccc-----cCcCCHHHHHHHHhcCcEEEEeCCCCCC-CHHH-HHHHHHCCcE
Confidence 11 22 2336888887763 345655555555 2233 4555555654 4444 5667777666
No 333
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.90 E-value=0.012 Score=55.89 Aligned_cols=109 Identities=16% Similarity=0.184 Sum_probs=72.6
Q ss_pred ccccCCCEEEEEeeChhhHHHHHHhccCCCeEE-EEcCC-------CCChhHHH----hcC-ce--ecCCHHhh-cCcCC
Q 021995 112 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRV-------KMDPQLEK----ETG-AK--FEEDLDTM-LPKCD 175 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~-~~dr~-------~~~~~~~~----~~g-~~--~~~~l~el-l~~aD 175 (304)
+.++.|++|.|.|+|++|+.+|+.|...|++|+ +.|.+ ....+... +.+ +. .. +-+++ -..||
T Consensus 213 g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~-~~~e~~~~~~D 291 (419)
T 3aoe_E 213 GLDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDL-APEEVFGLEAE 291 (419)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCB-CTTTGGGSSCS
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeec-cchhhhccCce
Confidence 347899999999999999999999999999988 55542 22222222 122 11 11 11233 34799
Q ss_pred EEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 176 IVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 176 vVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
+++-|.. .+.++.+..+.++ =.+++..+.+++- .+-.+.|.+..|.
T Consensus 292 VliP~A~-----~n~i~~~~A~~l~-ak~V~EgAN~p~t--~~A~~~L~~~Gi~ 337 (419)
T 3aoe_E 292 VLVLAAR-----EGALDGDRARQVQ-AQAVVEVANFGLN--PEAEAYLLGKGAL 337 (419)
T ss_dssp EEEECSC-----TTCBCHHHHTTCC-CSEEEECSTTCBC--HHHHHHHHHHTCE
T ss_pred EEEeccc-----ccccccchHhhCC-ceEEEECCCCcCC--HHHHHHHHHCCCE
Confidence 9998864 3567777777775 3588888888863 3344566666665
No 334
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.89 E-value=0.0013 Score=60.28 Aligned_cols=89 Identities=20% Similarity=0.194 Sum_probs=65.7
Q ss_pred CCCEEEEEe-eChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHh----hc--CcCCEEEEcCCC
Q 021995 116 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDT----ML--PKCDIVVVNTPL 183 (304)
Q Consensus 116 ~g~~vgIIG-~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~e----ll--~~aDvVi~~~p~ 183 (304)
.|++|.|+| .|.+|..+++.++..|++|++.+++..+.+.++++|.... .++.+ +. ...|+++.++..
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~ 227 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGK 227 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCCh
Confidence 688999999 8999999999999999999999987666666777775421 12222 11 247888887763
Q ss_pred ChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 184 TEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
+ .-...++.++++..+|.++.
T Consensus 228 -~-----~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 228 -D-----TFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp -G-----GHHHHHHHEEEEEEEEECCC
T ss_pred -H-----HHHHHHHHhccCCEEEEEcC
Confidence 1 12567788888888888863
No 335
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.89 E-value=0.00078 Score=62.07 Aligned_cols=88 Identities=19% Similarity=0.179 Sum_probs=66.3
Q ss_pred CCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec----CCHHh----hcC--cCCEEEEcCCCC
Q 021995 116 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----EDLDT----MLP--KCDIVVVNTPLT 184 (304)
Q Consensus 116 ~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~----~~l~e----ll~--~aDvVi~~~p~~ 184 (304)
.|++|.|+|. |.||..+++.++.+|++|++.+++....+.++++|.... .++.+ +.. ..|+++-++...
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~~ 238 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGP 238 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCchh
Confidence 6889999998 999999999999999999999987777777777776422 22322 222 489998887642
Q ss_pred hhhhccccHHHHhcCCCCCEEEEcC
Q 021995 185 EKTRGMFDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 185 ~~t~~~i~~~~l~~mk~g~ilVn~~ 209 (304)
.-...+..++++..+|.++
T Consensus 239 ------~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 239 ------AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp ------CHHHHHHTEEEEEEEEEC-
T ss_pred ------HHHHHHHhhcCCCEEEEEE
Confidence 1256778889999999886
No 336
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.88 E-value=0.0023 Score=59.02 Aligned_cols=97 Identities=18% Similarity=0.127 Sum_probs=60.5
Q ss_pred cCCCEEEEEeeChhhHHHHHHhccCCC--eEEEEcCCCCChh-HHHh--c------CceecCCHHhhcCcCCEEEEcCCC
Q 021995 115 LEGKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQ-LEKE--T------GAKFEEDLDTMLPKCDIVVVNTPL 183 (304)
Q Consensus 115 L~g~~vgIIG~G~IG~~lA~~l~~~G~--~V~~~dr~~~~~~-~~~~--~------g~~~~~~l~ell~~aDvVi~~~p~ 183 (304)
-.+++|+|||.|.||..+|..|...|. ++..+|++....+ .+.+ . ......+..+.+++||+|+++...
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCC
Confidence 356799999999999999999987666 8999998642221 0111 1 122223445779999999998653
Q ss_pred C--h-hhh-ccc--c----H---HHHhcCCCCCEEEEcCCC
Q 021995 184 T--E-KTR-GMF--D----K---DRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 184 ~--~-~t~-~~i--~----~---~~l~~mk~g~ilVn~~rg 211 (304)
. + .++ .++ | . +.+....|++++++++..
T Consensus 87 ~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNP 127 (326)
T 3vku_A 87 PQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 127 (326)
T ss_dssp C----------------CHHHHHHHHHTTTCCSEEEECSSS
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCc
Confidence 2 1 111 111 1 1 223445689999999754
No 337
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=96.88 E-value=0.0012 Score=59.76 Aligned_cols=105 Identities=15% Similarity=0.185 Sum_probs=70.7
Q ss_pred CCEEEEEee-ChhhHHHHHHhccCCCeEE-EEcCCCCChhHHHhcCceecCCHHhhcC--cCCEEEEcCCCChhhhcccc
Q 021995 117 GKTVGTVGC-GRIGKLLLQRLKPFNCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 117 g~~vgIIG~-G~IG~~lA~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~l~ell~--~aDvVi~~~p~~~~t~~~i~ 192 (304)
.++|+|+|+ |++|+.+++.++..|++++ .++|..... ...|...+.+++++.. ..|++++++|.. .+...+
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~---~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~~-~~~~~~- 81 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGM---EVLGVPVYDTVKEAVAHHEVDASIIFVPAP-AAADAA- 81 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC---EETTEEEESSHHHHHHHSCCSEEEECCCHH-HHHHHH-
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCc---eECCEEeeCCHHHHhhcCCCCEEEEecCHH-HHHHHH-
Confidence 468999998 9999999999988899843 666643111 1346777788999988 899999999843 222222
Q ss_pred HHHHhcCCCCC-EEEEcCCCch-hchHHHHHHHHcCCce
Q 021995 193 KDRIAKMKKGV-LIVNNARGAI-MDTQAVVDACSSGHIA 229 (304)
Q Consensus 193 ~~~l~~mk~g~-ilVn~~rg~~-vd~~aL~~aL~~g~i~ 229 (304)
++..+ .|. .+|..+.|-. .+++.+.++.++..+.
T Consensus 82 ~ea~~---~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~ 117 (288)
T 1oi7_A 82 LEAAH---AGIPLIVLITEGIPTLDMVRAVEEIKALGSR 117 (288)
T ss_dssp HHHHH---TTCSEEEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred HHHHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 22222 232 2555666632 3556788888776664
No 338
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=96.88 E-value=0.0019 Score=59.64 Aligned_cols=68 Identities=28% Similarity=0.317 Sum_probs=47.8
Q ss_pred CEEEEEeeChhhHHHHHHhccC-CCeEE-EEcCCCCChh-HHHhcCc------------------eecCCHHhhcCcCCE
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQ-LEKETGA------------------KFEEDLDTMLPKCDI 176 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~-G~~V~-~~dr~~~~~~-~~~~~g~------------------~~~~~l~ell~~aDv 176 (304)
.+|||+|+|.||+.+++.+... ++++. +.|+++.... .++..|+ ....++++++.++|+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDv 82 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI 82 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCE
Confidence 3899999999999999998764 56765 5566543222 2223331 233578888889999
Q ss_pred EEEcCCCCh
Q 021995 177 VVVNTPLTE 185 (304)
Q Consensus 177 Vi~~~p~~~ 185 (304)
|+.|+|...
T Consensus 83 V~~aTp~~~ 91 (334)
T 2czc_A 83 IVDATPGGI 91 (334)
T ss_dssp EEECCSTTH
T ss_pred EEECCCccc
Confidence 999999653
No 339
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.87 E-value=0.00067 Score=62.36 Aligned_cols=89 Identities=15% Similarity=0.140 Sum_probs=67.1
Q ss_pred CCCEEEEEeeC-hhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHh----hc--CcCCEEEEcCCC
Q 021995 116 EGKTVGTVGCG-RIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDT----ML--PKCDIVVVNTPL 183 (304)
Q Consensus 116 ~g~~vgIIG~G-~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~e----ll--~~aDvVi~~~p~ 183 (304)
.|++|.|+|.| .+|..+++.++..|++|++.+++....+.++++|.... .++.+ +. ...|+++-++..
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 223 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGG 223 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCC
Confidence 68899999997 89999999999999999999998888888888876422 22222 22 258999888763
Q ss_pred ChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 184 TEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
. .+ .+.+..++++..+|.++-
T Consensus 224 ~-~~-----~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 224 P-DG-----NELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp H-HH-----HHHHHTEEEEEEEEECCC
T ss_pred h-hH-----HHHHHHhcCCCEEEEEee
Confidence 2 11 345578899999999874
No 340
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=96.86 E-value=0.002 Score=58.25 Aligned_cols=102 Identities=18% Similarity=0.221 Sum_probs=66.0
Q ss_pred CEEEEEeeChhhHHHHHHhcc----CCCeEE-EEcCCCCChhHHHhcCceecCCHHhhcC--cCCEEEEcCCCChhhhcc
Q 021995 118 KTVGTVGCGRIGKLLLQRLKP----FNCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGM 190 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~----~G~~V~-~~dr~~~~~~~~~~~g~~~~~~l~ell~--~aDvVi~~~p~~~~t~~~ 190 (304)
.+|||||+|.||+..++.+.. -+++++ ++|++.. ++..|+. +.+++++++ +.|+|++++|.....
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~----a~~~g~~-~~~~~ell~~~~vD~V~i~tp~~~H~--- 79 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL----GSLDEVR-QISLEDALRSQEIDVAYICSESSSHE--- 79 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC----CEETTEE-BCCHHHHHHCSSEEEEEECSCGGGHH---
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH----HHHcCCC-CCCHHHHhcCCCCCEEEEeCCcHhHH---
Confidence 489999999999999988865 367755 6676532 2234554 368999986 689999999954321
Q ss_pred ccHHHHhcCCCCC-EEEEc-CCCchhchHHHHHHHHcCCce
Q 021995 191 FDKDRIAKMKKGV-LIVNN-ARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 191 i~~~~l~~mk~g~-ilVn~-~rg~~vd~~aL~~aL~~g~i~ 229 (304)
+...+.++.|. +++.- .--.+-+.++|.++.++..+.
T Consensus 80 --~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 118 (294)
T 1lc0_A 80 --DYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRV 118 (294)
T ss_dssp --HHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCC
T ss_pred --HHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCE
Confidence 23334455555 55542 122344556777777665544
No 341
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=96.86 E-value=0.001 Score=64.52 Aligned_cols=115 Identities=16% Similarity=0.110 Sum_probs=70.7
Q ss_pred CCEEEEEeeChh-hHHHHHHhcc----C-CCeEEEEcCCCCChhHH----H----hcC----ceecCCHHhhcCcCCEEE
Q 021995 117 GKTVGTVGCGRI-GKLLLQRLKP----F-NCNLLYHDRVKMDPQLE----K----ETG----AKFEEDLDTMLPKCDIVV 178 (304)
Q Consensus 117 g~~vgIIG~G~I-G~~lA~~l~~----~-G~~V~~~dr~~~~~~~~----~----~~g----~~~~~~l~ell~~aDvVi 178 (304)
.++|+|||.|.. |.+++..|.. + +.+|..||++....+.. . ..+ +....++++.+++||+|+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VV 107 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 107 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEE
Confidence 459999999998 5556655543 3 66899999975322211 1 111 233468888999999999
Q ss_pred EcCCCChh---hh----------------------------cccc--HHHHhcCCCCCEEEEcCCCchhchHHHHHHHHc
Q 021995 179 VNTPLTEK---TR----------------------------GMFD--KDRIAKMKKGVLIVNNARGAIMDTQAVVDACSS 225 (304)
Q Consensus 179 ~~~p~~~~---t~----------------------------~~i~--~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~ 225 (304)
+++|.... ++ .++. .+.+....|++++||++..--+-+.++.+....
T Consensus 108 iaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~~~k~~p~ 187 (472)
T 1u8x_X 108 AHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPN 187 (472)
T ss_dssp ECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHHHHHSTT
T ss_pred EcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhCCC
Confidence 99986321 11 0110 122334468999999997765555555554434
Q ss_pred CCceEE
Q 021995 226 GHIAGY 231 (304)
Q Consensus 226 g~i~ga 231 (304)
.++.|.
T Consensus 188 ~rViG~ 193 (472)
T 1u8x_X 188 SKILNI 193 (472)
T ss_dssp CCEEEC
T ss_pred CCEEEe
Confidence 455554
No 342
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=96.86 E-value=0.003 Score=57.83 Aligned_cols=96 Identities=19% Similarity=0.298 Sum_probs=69.4
Q ss_pred ccCCCEEEEEee---ChhhHHHHHHhccC-CCeEEEEcCCCC-ChhH----HHhcCc--eecCCHHhhcCcCCEEEEcCC
Q 021995 114 DLEGKTVGTVGC---GRIGKLLLQRLKPF-NCNLLYHDRVKM-DPQL----EKETGA--KFEEDLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 114 ~L~g~~vgIIG~---G~IG~~lA~~l~~~-G~~V~~~dr~~~-~~~~----~~~~g~--~~~~~l~ell~~aDvVi~~~p 182 (304)
.+.|.+|+++|= |++.++++..+..+ |++|.+..|... +.+. +++.|. ....++++.++++|+|....-
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~ 230 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRV 230 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC-
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCc
Confidence 478999999997 59999999999999 999999988642 2221 223354 345789999999999987643
Q ss_pred CCh-----hh-----hccccHHHHhcCCCCCEEEEcC
Q 021995 183 LTE-----KT-----RGMFDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 183 ~~~-----~t-----~~~i~~~~l~~mk~g~ilVn~~ 209 (304)
..+ +. ..-++.+.++.+|++++|..+.
T Consensus 231 q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 267 (310)
T 3csu_A 231 QKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPL 267 (310)
T ss_dssp ----------------CCBCGGGGTTCCTTCEEECCS
T ss_pred cccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCC
Confidence 211 10 2346778888888888887765
No 343
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=96.85 E-value=0.024 Score=51.70 Aligned_cols=128 Identities=20% Similarity=0.303 Sum_probs=83.6
Q ss_pred HHHhCCcEEEEcC-CCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEee---ChhhHHH
Q 021995 57 AAAAAGLTVAEVT-GSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGC---GRIGKLL 132 (304)
Q Consensus 57 ~~~~~gI~v~n~~-g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~---G~IG~~l 132 (304)
.++-.+|+|.|.- |....++ .+|+-++.+.+++ | .+.|.+|++||= |++.+++
T Consensus 113 lA~~~~vPVINag~g~~~HPt--Q~LaDl~Ti~e~~--------------------g-~l~glkva~vGD~~~~rva~Sl 169 (306)
T 4ekn_B 113 ASEYSQVPIINAGDGSNQHPT--QTLLDLYTIMREI--------------------G-RIDGIKIAFVGDLKYGRTVHSL 169 (306)
T ss_dssp HHHHCSSCEEESCSSSSCCHH--HHHHHHHHHHHHH--------------------S-CSTTCEEEEESCTTTCHHHHHH
T ss_pred HHHhCCCCEEeCCCCCCcCcH--HHHHHHHHHHHHh--------------------C-CcCCCEEEEEcCCCCCcHHHHH
Confidence 4556789999983 4333332 2344445554421 1 478999999997 5899999
Q ss_pred HHHhccC-CCeEEEEcCCCC-Ch-h---HHHhcCce--ecCCHHhhcCcCCEEEEcCCCC------hhh-----hccccH
Q 021995 133 LQRLKPF-NCNLLYHDRVKM-DP-Q---LEKETGAK--FEEDLDTMLPKCDIVVVNTPLT------EKT-----RGMFDK 193 (304)
Q Consensus 133 A~~l~~~-G~~V~~~dr~~~-~~-~---~~~~~g~~--~~~~l~ell~~aDvVi~~~p~~------~~t-----~~~i~~ 193 (304)
+..+..+ |++|.+..|... .+ + .+++.|.. ...++++.++++|+|....-.. ++. ..-++.
T Consensus 170 ~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~~q~er~~~~~e~~~~~~~y~v~~ 249 (306)
T 4ekn_B 170 VYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKR 249 (306)
T ss_dssp HHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCGGGCCTTCSEEEECCCCGGGCCSHHHHHHHHHHHCBCH
T ss_pred HHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeCCcccccCCCHHHHHHhccCcEECH
Confidence 9999999 999999988542 22 2 22344543 3579999999999998753211 111 133566
Q ss_pred HHHhcCCCCCEEEEcC
Q 021995 194 DRIAKMKKGVLIVNNA 209 (304)
Q Consensus 194 ~~l~~mk~g~ilVn~~ 209 (304)
+.++. ++++|..+.
T Consensus 250 ~~l~~--~~ai~mH~l 263 (306)
T 4ekn_B 250 EYVEG--KKFIIMHPL 263 (306)
T ss_dssp HHHTT--CCCEEECCS
T ss_pred HHHcC--CCCEEECCC
Confidence 66665 677776654
No 344
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=96.85 E-value=0.001 Score=61.07 Aligned_cols=65 Identities=15% Similarity=0.191 Sum_probs=48.1
Q ss_pred CEEEEEeeChhhHHHHHHhc--cCCCeE-EEEcCCCCC--hhHHHhcCce-ecCCHHhhc-----CcCCEEEEcCC
Q 021995 118 KTVGTVGCGRIGKLLLQRLK--PFNCNL-LYHDRVKMD--PQLEKETGAK-FEEDLDTML-----PKCDIVVVNTP 182 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~--~~G~~V-~~~dr~~~~--~~~~~~~g~~-~~~~l~ell-----~~aDvVi~~~p 182 (304)
.+|||||+|.||+.+++.+. .-++++ .++|+++.. ...++++|.. ...+.++++ .+.|+|+.++|
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp 80 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATS 80 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCC
Confidence 48999999999999999984 346774 467887655 3445566764 245667775 45899999999
No 345
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=96.85 E-value=0.00069 Score=62.83 Aligned_cols=68 Identities=22% Similarity=0.215 Sum_probs=49.1
Q ss_pred CEEEEEeeChhhHHHHHHhccC--------CCeEE-EEcCCCCCh-hHHHhcCc-eecCCHHhhcCc--CCEEEEcCCCC
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF--------NCNLL-YHDRVKMDP-QLEKETGA-KFEEDLDTMLPK--CDIVVVNTPLT 184 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~--------G~~V~-~~dr~~~~~-~~~~~~g~-~~~~~l~ell~~--aDvVi~~~p~~ 184 (304)
.+|||||+|.||+..++.++.. +++|. ++|+++... ..++++|+ ..+.+++++++. .|+|++++|..
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP~~ 86 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTPGD 86 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSCGG
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChH
Confidence 4899999999999887766532 34654 778875333 34455675 456799999964 79999999954
Q ss_pred h
Q 021995 185 E 185 (304)
Q Consensus 185 ~ 185 (304)
.
T Consensus 87 ~ 87 (390)
T 4h3v_A 87 S 87 (390)
T ss_dssp G
T ss_pred H
Confidence 3
No 346
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=96.84 E-value=0.007 Score=58.59 Aligned_cols=107 Identities=21% Similarity=0.327 Sum_probs=69.5
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCCeEEEE--------cCCCCChhHHHh----cC-------ceecCCHHhhcCcC
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYH--------DRVKMDPQLEKE----TG-------AKFEEDLDTMLPKC 174 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~--------dr~~~~~~~~~~----~g-------~~~~~~l~ell~~a 174 (304)
+|.|+||.|-|+|++|+..|+.|...|++|+++ |+.....+...+ .| .+...+ +=+-..|
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~~~~~a~~~~~-~il~~~~ 319 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEG-SILEVDC 319 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSSTTCTTSEEECS-CGGGSCC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCeecccCceeecc-ccccccc
Confidence 589999999999999999999999999998763 333333322221 11 122221 1133479
Q ss_pred CEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 175 DIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 175 DvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
|+++-|.. .+.|+.+..+.++ -.+++-.+.+++ .. +-.+.|.+..|.
T Consensus 320 DIliPcA~-----~n~I~~~na~~l~-akiV~EgAN~p~-T~-eA~~iL~~rGIl 366 (501)
T 3mw9_A 320 DILIPAAS-----EKQLTKSNAPRVK-AKIIAEGANGPT-TP-EADKIFLERNIM 366 (501)
T ss_dssp SEEEECSS-----SCCBCTTTGGGCC-CSEEECCSSSCB-CH-HHHHHHHHTTCE
T ss_pred eEEeeccc-----cCccCHhHHHHcC-ceEEEeCCCCcC-CH-HHHHHHHHCCCE
Confidence 99988764 4677777777775 456667777763 33 334566665554
No 347
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=96.84 E-value=0.0008 Score=62.98 Aligned_cols=90 Identities=17% Similarity=0.186 Sum_probs=65.9
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCC-CeEEEEcCCCCChhHHHhcCceec-C-C------HH----hhcC--cCCEEEEc
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFN-CNLLYHDRVKMDPQLEKETGAKFE-E-D------LD----TMLP--KCDIVVVN 180 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G-~~V~~~dr~~~~~~~~~~~g~~~~-~-~------l~----ell~--~aDvVi~~ 180 (304)
.|++|.|+|.|.+|...++.++.+| .+|++.++++.+.+.++++|+..+ + . +. ++.. ..|+|+-+
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~ 274 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEA 274 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEEC
Confidence 5789999999999999999999999 599999987766677777776421 1 1 11 1222 57999888
Q ss_pred CCCChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 181 TPLTEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 181 ~p~~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
+...+. -...++.++++..+|.++.
T Consensus 275 ~g~~~~-----~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 275 TGDSRA-----LLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp SSCTTH-----HHHHHHHEEEEEEEEECCC
T ss_pred CCCHHH-----HHHHHHHHhcCCEEEEEec
Confidence 764322 1466778888888888863
No 348
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=96.84 E-value=0.0011 Score=61.60 Aligned_cols=68 Identities=12% Similarity=0.093 Sum_probs=50.8
Q ss_pred CCEEEEEeeChhhH-HHHHHhccCCCeEE-EEcCCCCChh-HHHhcC-ceecCCHHhhcCc--CCEEEEcCCCC
Q 021995 117 GKTVGTVGCGRIGK-LLLQRLKPFNCNLL-YHDRVKMDPQ-LEKETG-AKFEEDLDTMLPK--CDIVVVNTPLT 184 (304)
Q Consensus 117 g~~vgIIG~G~IG~-~lA~~l~~~G~~V~-~~dr~~~~~~-~~~~~g-~~~~~~l~ell~~--aDvVi~~~p~~ 184 (304)
-.+|||||+|.+|. .++..+..-+++++ ++|+++...+ .+++++ ...+.+++++++. .|+|++++|..
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~ 99 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSS 99 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCHH
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChH
Confidence 45899999999995 56676666789955 7788764333 344555 4567899999976 89999999954
No 349
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=96.83 E-value=0.00056 Score=62.98 Aligned_cols=89 Identities=16% Similarity=0.128 Sum_probs=62.4
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHHHhcCceec-----CCHHhhc-----CcCCEEEEcCCCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE-----EDLDTML-----PKCDIVVVNTPLT 184 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell-----~~aDvVi~~~p~~ 184 (304)
.|++|.|+|.|.+|..+++.++.+|+ +|++.++++.+.+.++++ .... .++.+.+ ...|+++-++...
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~ 242 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNE 242 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhcCCCCCEEEECCCCH
Confidence 78899999999999999999999999 899999865444444443 3211 1332222 2578888887642
Q ss_pred hhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 185 EKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 185 ~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
+. -...++.|+++..+|.++.
T Consensus 243 ~~-----~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 243 AA-----IHQGLMALIPGGEARILGI 263 (343)
T ss_dssp HH-----HHHHHHHEEEEEEEEECCC
T ss_pred HH-----HHHHHHHHhcCCEEEEEec
Confidence 22 1456777888888888864
No 350
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.81 E-value=0.00061 Score=58.24 Aligned_cols=91 Identities=11% Similarity=0.146 Sum_probs=60.5
Q ss_pred CEEEEEe-eChhhHHHHHHhc-cCCCeEEEEcCCCC-ChhHH--HhcCce-------ecCCHHhhcCcCCEEEEcCCCCh
Q 021995 118 KTVGTVG-CGRIGKLLLQRLK-PFNCNLLYHDRVKM-DPQLE--KETGAK-------FEEDLDTMLPKCDIVVVNTPLTE 185 (304)
Q Consensus 118 ~~vgIIG-~G~IG~~lA~~l~-~~G~~V~~~dr~~~-~~~~~--~~~g~~-------~~~~l~ell~~aDvVi~~~p~~~ 185 (304)
++|.|.| .|.||+.+++.|. ..|++|++.+|++. ..+.. ...++. ..++++++++++|+|+.+.....
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~n 85 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMESG 85 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCCH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCCC
Confidence 5799999 5999999999999 89999999998753 22222 111221 11345678899999998886431
Q ss_pred hhhccccHHHHhcCCC-C-CEEEEcCCCc
Q 021995 186 KTRGMFDKDRIAKMKK-G-VLIVNNARGA 212 (304)
Q Consensus 186 ~t~~~i~~~~l~~mk~-g-~ilVn~~rg~ 212 (304)
.. ....++.|++ + ..||+++...
T Consensus 86 -~~---~~~~~~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 86 -SD---MASIVKALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp -HH---HHHHHHHHHHTTCCEEEEEEETT
T ss_pred -hh---HHHHHHHHHhcCCCeEEEEeece
Confidence 11 3455555542 2 4688887544
No 351
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=96.81 E-value=0.002 Score=59.64 Aligned_cols=91 Identities=11% Similarity=0.101 Sum_probs=66.6
Q ss_pred cCCCEEEEEeeChhhHHH-HHHh-ccCCCe-EEEEcCCCC---ChhHHHhcCceec----CCHHh---hcCcCCEEEEcC
Q 021995 115 LEGKTVGTVGCGRIGKLL-LQRL-KPFNCN-LLYHDRVKM---DPQLEKETGAKFE----EDLDT---MLPKCDIVVVNT 181 (304)
Q Consensus 115 L~g~~vgIIG~G~IG~~l-A~~l-~~~G~~-V~~~dr~~~---~~~~~~~~g~~~~----~~l~e---ll~~aDvVi~~~ 181 (304)
..+++|.|+|.|.+|... ++.+ +.+|++ |++.+++.. +.+.++++|+..+ .++.+ +-...|+|+-++
T Consensus 171 ~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~i~~~~gg~Dvvid~~ 250 (357)
T 2b5w_A 171 WDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQMDFIYEAT 250 (357)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGGHHHHSCCEEEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHHHHHhCCCCCEEEECC
Confidence 345899999999999999 9999 999998 999998776 6777788887543 12222 101478888887
Q ss_pred CCChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 182 PLTEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 182 p~~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
...+. -...++.++++..+|.++.
T Consensus 251 g~~~~-----~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 251 GFPKH-----AIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp CCHHH-----HHHHHHHEEEEEEEEECCC
T ss_pred CChHH-----HHHHHHHHhcCCEEEEEeC
Confidence 63211 1466777888888888863
No 352
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=96.80 E-value=0.002 Score=59.35 Aligned_cols=116 Identities=16% Similarity=0.091 Sum_probs=67.4
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCC--eEEEEcCCCCChhH-HHhc--C------ceecCCHHhhcCcCCEEEEcCCCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQL-EKET--G------AKFEEDLDTMLPKCDIVVVNTPLT 184 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~--~V~~~dr~~~~~~~-~~~~--g------~~~~~~l~ell~~aDvVi~~~p~~ 184 (304)
..++|+|||.|.+|..++..+...+. ++..+|.+..+.+. +.++ . .....+..+.+++||+|+++.+..
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~ 87 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAP 87 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 34699999999999999998875554 89999986422211 1111 1 111123467799999999998643
Q ss_pred hhh-----------hcccc--HHHHhcCCCCCEEEEcCCCchhchHHHHHH--HHcCCceEE
Q 021995 185 EKT-----------RGMFD--KDRIAKMKKGVLIVNNARGAIMDTQAVVDA--CSSGHIAGY 231 (304)
Q Consensus 185 ~~t-----------~~~i~--~~~l~~mk~g~ilVn~~rg~~vd~~aL~~a--L~~g~i~ga 231 (304)
..- ..++. .+.+....|++++++++..-=+....+.+. +...++.|.
T Consensus 88 ~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~ 149 (326)
T 2zqz_A 88 QKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYATWKLSGFPKNRVVGS 149 (326)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHHcCCCHHHEEEc
Confidence 211 01110 012223368999999854433333333333 333455554
No 353
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.79 E-value=0.0024 Score=59.23 Aligned_cols=66 Identities=21% Similarity=0.303 Sum_probs=43.5
Q ss_pred EEEEEeeChhhHHHHHHhccC-CCeEE-EEcCCCCCh-hHHHhcCceec-----------------CCHHhhcCcCCEEE
Q 021995 119 TVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDP-QLEKETGAKFE-----------------EDLDTMLPKCDIVV 178 (304)
Q Consensus 119 ~vgIIG~G~IG~~lA~~l~~~-G~~V~-~~dr~~~~~-~~~~~~g~~~~-----------------~~l~ell~~aDvVi 178 (304)
+|||+|+|.||+.+++.+... ++++. +.|++.... ..+...++..+ .++++++.++|+|+
T Consensus 3 kVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV~ 82 (340)
T 1b7g_O 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVV 82 (340)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEE
T ss_pred EEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEEE
Confidence 799999999999999998754 67765 455543221 22222232221 23445566899999
Q ss_pred EcCCCC
Q 021995 179 VNTPLT 184 (304)
Q Consensus 179 ~~~p~~ 184 (304)
.|+|..
T Consensus 83 ~aTp~~ 88 (340)
T 1b7g_O 83 DTTPNG 88 (340)
T ss_dssp ECCSTT
T ss_pred ECCCCc
Confidence 999854
No 354
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=96.79 E-value=0.0096 Score=57.05 Aligned_cols=110 Identities=18% Similarity=0.210 Sum_probs=66.6
Q ss_pred ccccCCCEEEEEeeChhhHHHHHHhccCCCeEE-EEcCC-------CCChhHHH------h-------------cCceec
Q 021995 112 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRV-------KMDPQLEK------E-------------TGAKFE 164 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~-~~dr~-------~~~~~~~~------~-------------~g~~~~ 164 (304)
+.++.|+||.|-|+|++|+.+|+.|...|++|+ +.|.+ ....+... + .+.+..
T Consensus 234 g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v 313 (456)
T 3r3j_A 234 NDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYF 313 (456)
T ss_dssp TCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEE
T ss_pred CCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCceEe
Confidence 457899999999999999999999999999976 55532 22222111 0 022222
Q ss_pred CCHHh-hcCcCCEEEEcCCCChhhhccccHHHHhcCC--CCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 165 EDLDT-MLPKCDIVVVNTPLTEKTRGMFDKDRIAKMK--KGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 165 ~~l~e-ll~~aDvVi~~~p~~~~t~~~i~~~~l~~mk--~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
+ .++ +-..||+++-|.. .+.|+.+..+.+. +=.+++-.+.+++-. + -.+.|.+..|.
T Consensus 314 ~-~~~i~~~~~DI~iPcA~-----~~~I~~~na~~l~~~~ak~V~EgAN~p~T~-e-A~~iL~~rGI~ 373 (456)
T 3r3j_A 314 E-NQKPWNIPCDIAFPCAT-----QNEINENDADLFIQNKCKMIVEGANMPTHI-K-ALHKLKQNNII 373 (456)
T ss_dssp C-SCCGGGSCCSEEEECSC-----TTCBCHHHHHHHHHHTCCEEECCSSSCBCT-T-HHHHHHTTTCE
T ss_pred C-CccccccCccEEEeCCC-----ccchhhHHHHHHHhcCCeEEEecCCCCCCH-H-HHHHHHHCCCE
Confidence 1 223 2346888887763 3567777666662 234555566666432 2 23555555554
No 355
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=96.78 E-value=0.0027 Score=59.19 Aligned_cols=94 Identities=15% Similarity=0.136 Sum_probs=59.1
Q ss_pred CCEEEEEe-eChhhHHHHHHhccCC------CeEEEEc-CCCCChhHH------H---hcCceecCCHHhhcCcCCEEEE
Q 021995 117 GKTVGTVG-CGRIGKLLLQRLKPFN------CNLLYHD-RVKMDPQLE------K---ETGAKFEEDLDTMLPKCDIVVV 179 (304)
Q Consensus 117 g~~vgIIG-~G~IG~~lA~~l~~~G------~~V~~~d-r~~~~~~~~------~---~~g~~~~~~l~ell~~aDvVi~ 179 (304)
..+|+|+| .|.+|+.+.+.|...+ .++..+. ++....... . +...... +.+ .+.++|+|++
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~-~~~-~~~~~DvVf~ 86 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPT-EAA-VLGGHDAVFL 86 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEEC-CHH-HHTTCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccC-CHH-HhcCCCEEEE
Confidence 36899999 9999999999998766 4666654 322111111 0 1111112 333 3568999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHH
Q 021995 180 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQA 218 (304)
Q Consensus 180 ~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~a 218 (304)
|+|... ..+..+.++.|+.+|+.|...-.+..+
T Consensus 87 alg~~~------s~~~~~~~~~G~~vIDlSa~~R~~~~~ 119 (352)
T 2nqt_A 87 ALPHGH------SAVLAQQLSPETLIIDCGADFRLTDAA 119 (352)
T ss_dssp CCTTSC------CHHHHHHSCTTSEEEECSSTTTCSCHH
T ss_pred CCCCcc------hHHHHHHHhCCCEEEEECCCccCCcch
Confidence 999653 345555556789999998655444434
No 356
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.77 E-value=0.0031 Score=57.86 Aligned_cols=111 Identities=14% Similarity=0.079 Sum_probs=73.2
Q ss_pred CCEEEEEeeChhhHH-HHHHhccCCCeEEEEcCCCCCh--hHHHhcCceec--CCHHhhc-CcCCEEEEc--CCC-Chhh
Q 021995 117 GKTVGTVGCGRIGKL-LLQRLKPFNCNLLYHDRVKMDP--QLEKETGAKFE--EDLDTML-PKCDIVVVN--TPL-TEKT 187 (304)
Q Consensus 117 g~~vgIIG~G~IG~~-lA~~l~~~G~~V~~~dr~~~~~--~~~~~~g~~~~--~~l~ell-~~aDvVi~~--~p~-~~~t 187 (304)
.++|.|||.|.+|.+ +|+.|+..|++|.++|.+..+. +..++.|+... .+.+++. .++|+|+.. +|. +|..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCTTCHHH
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCCCCHHH
Confidence 478999999999996 9999999999999999865322 33455676543 3445555 579999876 332 3322
Q ss_pred h-------ccccH-HHHhc--CCCC-CEEEEcCCCchhchHHHHHHHHcCC
Q 021995 188 R-------GMFDK-DRIAK--MKKG-VLIVNNARGAIMDTQAVVDACSSGH 227 (304)
Q Consensus 188 ~-------~~i~~-~~l~~--mk~g-~ilVn~~rg~~vd~~aL~~aL~~g~ 227 (304)
. .++.+ +.+.. ++.. .+-|--+.|+.-...-+...|+...
T Consensus 84 ~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g 134 (326)
T 3eag_A 84 EAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAG 134 (326)
T ss_dssp HHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcC
Confidence 1 12332 34443 3332 4555556788888888888888754
No 357
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=96.77 E-value=0.001 Score=62.29 Aligned_cols=67 Identities=22% Similarity=0.356 Sum_probs=48.0
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhH--HHhcCceecCC---HHhhcCcCCEEEEc
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQL--EKETGAKFEED---LDTMLPKCDIVVVN 180 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~--~~~~g~~~~~~---l~ell~~aDvVi~~ 180 (304)
-+.|++|+|+|.|.+|+.+++.++.+|++|+++|+++..+.. +...-...+.+ +.++++++|+|+..
T Consensus 11 ~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~~ 82 (389)
T 3q2o_A 11 ILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTYE 82 (389)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeeec
Confidence 478999999999999999999999999999999986532211 11000011222 56788889998653
No 358
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.77 E-value=0.00067 Score=62.09 Aligned_cols=89 Identities=20% Similarity=0.131 Sum_probs=63.3
Q ss_pred CCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec------CCHHhhc-----CcCCEEEEcCCC
Q 021995 116 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE------EDLDTML-----PKCDIVVVNTPL 183 (304)
Q Consensus 116 ~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~------~~l~ell-----~~aDvVi~~~p~ 183 (304)
.|++|.|.|. |.||..+++.++..|++|++.+++....+.++++|.... .++.+.+ ...|+++.+...
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 224 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG 224 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCCh
Confidence 5889999998 999999999999999999999986544455555564211 2333222 247888877752
Q ss_pred ChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 184 TEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
+ + -...++.++++..+|.++-
T Consensus 225 -~-~----~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 225 -E-F----LNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp -H-H----HHHHHTTEEEEEEEEECCC
T ss_pred -H-H----HHHHHHHHhcCCEEEEEec
Confidence 1 1 2566788888888888864
No 359
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.77 E-value=0.0031 Score=53.53 Aligned_cols=94 Identities=14% Similarity=0.092 Sum_probs=60.0
Q ss_pred CEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-CCHH----hhcCcCCEEEEcCCCC--h---h
Q 021995 118 KTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-EDLD----TMLPKCDIVVVNTPLT--E---K 186 (304)
Q Consensus 118 ~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-~~l~----ell~~aDvVi~~~p~~--~---~ 186 (304)
++|.|.|. |.||+.+++.|...|++|++.+|++.+.......++... .++. +.+.++|+|+.+.... + .
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~ 80 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGRGY 80 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSCTH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCCcchhh
Confidence 47899997 999999999999999999999997533222211233211 1221 6788999999887542 1 1
Q ss_pred hhccccHHHHhcCC-CCCEEEEcCCC
Q 021995 187 TRGMFDKDRIAKMK-KGVLIVNNARG 211 (304)
Q Consensus 187 t~~~i~~~~l~~mk-~g~ilVn~~rg 211 (304)
..-.....+++.|+ .+..+|+++..
T Consensus 81 ~n~~~~~~l~~a~~~~~~~~v~~SS~ 106 (224)
T 3h2s_A 81 LHLDFATHLVSLLRNSDTLAVFILGS 106 (224)
T ss_dssp HHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 11111244566664 35788888754
No 360
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.77 E-value=0.0046 Score=59.46 Aligned_cols=94 Identities=21% Similarity=0.353 Sum_probs=67.2
Q ss_pred cccCCCEEEEEeeC----------hhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcC--ceecCCHHhhcCcCCEEEEc
Q 021995 113 YDLEGKTVGTVGCG----------RIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG--AKFEEDLDTMLPKCDIVVVN 180 (304)
Q Consensus 113 ~~L~g~~vgIIG~G----------~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g--~~~~~~l~ell~~aDvVi~~ 180 (304)
..+.|++|+|+|+- .-...+++.|...|++|.+|||.-. .+....++ +...+++++.++.+|.|+++
T Consensus 314 ~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~-~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~ 392 (450)
T 3gg2_A 314 GNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAM-KEAQKRLGDKVEYTTDMYDAVRGAEALFHV 392 (450)
T ss_dssp TCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCH-HHHHHHHGGGSEECSSHHHHTTTCSCEEEC
T ss_pred ccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCc-HHHHHhcCccceecCCHHHHhcCCCEEEEc
Confidence 45789999999973 3468899999999999999998542 22222333 56677889999999999999
Q ss_pred CCCChhhhccccHHHH-hcCCCCCEEEEcCCC
Q 021995 181 TPLTEKTRGMFDKDRI-AKMKKGVLIVNNARG 211 (304)
Q Consensus 181 ~p~~~~t~~~i~~~~l-~~mk~g~ilVn~~rg 211 (304)
+...+ .+ -++-+.+ +.|+ +.+++|+ |+
T Consensus 393 t~~~~-f~-~~~~~~~~~~~~-~~~i~D~-r~ 420 (450)
T 3gg2_A 393 TEWKE-FR-MPDWSALSQAMA-ASLVIDG-RN 420 (450)
T ss_dssp SCCGG-GS-SCCHHHHHHHSS-SCEEEES-SC
T ss_pred cCCHH-Hh-hcCHHHHHHhcC-CCEEEEC-CC
Confidence 87543 22 2344444 4465 5688885 44
No 361
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.76 E-value=0.0039 Score=59.45 Aligned_cols=109 Identities=13% Similarity=0.193 Sum_probs=65.3
Q ss_pred ccccCCCEEEEEeeChhhHHHHHHhccCCCeEE-EEcCCC------------CChhHHH----hcC-------ceecCCH
Q 021995 112 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRVK------------MDPQLEK----ETG-------AKFEEDL 167 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~-~~dr~~------------~~~~~~~----~~g-------~~~~~~l 167 (304)
+.++.|++|.|.|+|++|+.+++.|...|++|+ +.|.+. ...+... +.+ .+.. +.
T Consensus 207 g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i-~~ 285 (421)
T 2yfq_A 207 GIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERI-TD 285 (421)
T ss_dssp TCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC-------------
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEe-Cc
Confidence 346899999999999999999999999999988 445541 1111111 111 1222 22
Q ss_pred Hhhc-CcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 168 DTML-PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 168 ~ell-~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
++++ ..||+++-|.+ .+.|+.+....+ ...+++-.+.+++- .+-.+.|.++.+.
T Consensus 286 ~~~~~~~~DIliP~A~-----~n~i~~~~A~~l-~ak~VvEgAN~P~t--~ea~~il~~~GI~ 340 (421)
T 2yfq_A 286 EEFWTKEYDIIVPAAL-----ENVITGERAKTI-NAKLVCEAANGPTT--PEGDKVLTERGIN 340 (421)
T ss_dssp ---------CEEECSC-----SSCSCHHHHTTC-CCSEEECCSSSCSC--HHHHHHHHHHTCE
T ss_pred cchhcCCccEEEEcCC-----cCcCCcccHHHc-CCeEEEeCCccccC--HHHHHHHHHCCCE
Confidence 3333 36999998875 356778877777 46777777777763 3334555555555
No 362
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=96.76 E-value=0.0026 Score=58.41 Aligned_cols=114 Identities=15% Similarity=0.097 Sum_probs=67.2
Q ss_pred CEEEEEeeChhhHHHHHHhccCCC--eEEEEcCCCCChhH-HHhc--------CceecCCHHhhcCcCCEEEEcCCCChh
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQL-EKET--------GAKFEEDLDTMLPKCDIVVVNTPLTEK 186 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~--~V~~~dr~~~~~~~-~~~~--------g~~~~~~l~ell~~aDvVi~~~p~~~~ 186 (304)
.+|+|||.|.+|..++..+...+. ++..+|.+..+.+. +.++ ......+..+.+++||+|+++.+....
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~~~ 85 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQK 85 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC---
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 699999999999999998876555 89999986432221 1111 111212446779999999999864321
Q ss_pred h-----------hcccc--HHHHhcCCCCCEEEEcCCCchhchHHHHHH--HHcCCceEE
Q 021995 187 T-----------RGMFD--KDRIAKMKKGVLIVNNARGAIMDTQAVVDA--CSSGHIAGY 231 (304)
Q Consensus 187 t-----------~~~i~--~~~l~~mk~g~ilVn~~rg~~vd~~aL~~a--L~~g~i~ga 231 (304)
- ..++. .+.+....|++++++++..-=+....+.+. +...++.|.
T Consensus 86 ~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~ 145 (318)
T 1ez4_A 86 PGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYATWKFSGFPKERVIGS 145 (318)
T ss_dssp -------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHHcCCCHHHEEec
Confidence 1 01110 022233478999999865433333334333 333456554
No 363
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.75 E-value=0.0014 Score=60.36 Aligned_cols=63 Identities=22% Similarity=0.275 Sum_probs=48.8
Q ss_pred CCCEEEEEeeChhhH-HHHHHhccC-CCeEE-EEcCCCCChhHHHhcCceecCCHHhhcCc---CCEEEEcCCCC
Q 021995 116 EGKTVGTVGCGRIGK-LLLQRLKPF-NCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLPK---CDIVVVNTPLT 184 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~-~lA~~l~~~-G~~V~-~~dr~~~~~~~~~~~g~~~~~~l~ell~~---aDvVi~~~p~~ 184 (304)
.-.+|||||+|.||+ ..++.++.. +++|+ ++|++.. ..|+..+.+++++++. .|+|++++|..
T Consensus 24 ~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~------~~g~~~~~~~~~ll~~~~~vD~V~i~tp~~ 92 (330)
T 4ew6_A 24 SPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGT------VEGVNSYTTIEAMLDAEPSIDAVSLCMPPQ 92 (330)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCC------CTTSEEESSHHHHHHHCTTCCEEEECSCHH
T ss_pred CCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChh------hcCCCccCCHHHHHhCCCCCCEEEEeCCcH
Confidence 346899999999998 688888754 78865 6777653 2466677899999865 89999999943
No 364
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.75 E-value=0.0035 Score=52.93 Aligned_cols=93 Identities=14% Similarity=0.120 Sum_probs=59.7
Q ss_pred CEEEEEe-eChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-CCHH----hhcCcCCEEEEcCCCChhhhc--
Q 021995 118 KTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-EDLD----TMLPKCDIVVVNTPLTEKTRG-- 189 (304)
Q Consensus 118 ~~vgIIG-~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-~~l~----ell~~aDvVi~~~p~~~~t~~-- 189 (304)
++|.|.| .|.||+.+++.|...|++|++++|++.+.+... .++... .++. +.+..+|+|+.+.........
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~ 79 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKH 79 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTSH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhhhhhcCCCEEEECCcCCccccchH
Confidence 4799999 599999999999999999999999753322211 222211 1221 678899999988765432211
Q ss_pred -cccHHHHhcCCC--CCEEEEcCCC
Q 021995 190 -MFDKDRIAKMKK--GVLIVNNARG 211 (304)
Q Consensus 190 -~i~~~~l~~mk~--g~ilVn~~rg 211 (304)
......++.|++ ...+|+++..
T Consensus 80 ~~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 80 VTSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp HHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred HHHHHHHHHHHHhcCCceEEEEecc
Confidence 112345555553 3677877764
No 365
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=96.75 E-value=0.0013 Score=60.28 Aligned_cols=87 Identities=17% Similarity=0.223 Sum_probs=61.0
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-------CCHHhh-cCcCCEEEEcCCCChhhh
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-------EDLDTM-LPKCDIVVVNTPLTEKTR 188 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-------~~l~el-l~~aDvVi~~~p~~~~t~ 188 (304)
.+++.|+|+|.+|+.+++.|...|. |++.|+++...+ ..+.+.... +.|+++ ++++|.++++.+..+.
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~-- 190 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE-- 190 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHH--
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHH--
Confidence 5689999999999999999999999 999998775555 445554321 123444 7889999999885433
Q ss_pred ccccHHHHhcCCCCCEEEE
Q 021995 189 GMFDKDRIAKMKKGVLIVN 207 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn 207 (304)
++.-....+.+.+...+|-
T Consensus 191 n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 191 TIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp HHHHHHHHHTTCTTSEEEE
T ss_pred HHHHHHHHHHHCCCCeEEE
Confidence 3433456666777644443
No 366
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.74 E-value=0.0018 Score=59.61 Aligned_cols=90 Identities=16% Similarity=0.101 Sum_probs=67.3
Q ss_pred CCCEEEEEeeChhhHHHHHHhccC-CCeEEEEcCCCCChhHHHhcCceec----CCHHh----hcC--cCCEEEEcCCCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPF-NCNLLYHDRVKMDPQLEKETGAKFE----EDLDT----MLP--KCDIVVVNTPLT 184 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~~----~~l~e----ll~--~aDvVi~~~p~~ 184 (304)
.|++|.|+|.|.+|...++.++.. |.+|++.+++..+.+.++++|+... +++.+ +.. ..|+++-++...
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G~~ 250 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQ 250 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCCCH
Confidence 588999999999999999999987 7899999988777777888886432 12222 222 689999888743
Q ss_pred hhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 185 EKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 185 ~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
+. -...++.++++..++.++-
T Consensus 251 ~~-----~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 251 ST-----IDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp HH-----HHHHHHHEEEEEEEEECSC
T ss_pred HH-----HHHHHHHHhcCCEEEEECC
Confidence 22 2466777888888888874
No 367
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=96.71 E-value=0.0053 Score=57.91 Aligned_cols=90 Identities=16% Similarity=0.114 Sum_probs=66.9
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHHHH
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRI 196 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~l 196 (304)
-.++.|+|.|.+|+.+++.++.+|++|+++|+.+.. . + .+-++.+|-++...| .+.+
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~-----------~-~-~~~fp~a~~~~~~~p----------~~~~ 260 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVF-----------A-T-TARFPTADEVVVDWP----------HRYL 260 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTT-----------S-C-TTTCSSSSEEEESCH----------HHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhh-----------c-c-cccCCCceEEEeCCh----------HHHH
Confidence 358999999999999999999999999999975421 0 1 123456765555544 1222
Q ss_pred hc------CCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 197 AK------MKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 197 ~~------mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
.. +.++..+|=+.++.-.|...|..+|+++...
T Consensus 261 ~~~~~~~~~~~~t~vvvlTh~~~~D~~~L~~aL~~~~~~ 299 (386)
T 2we8_A 261 AAQAEAGAIDARTVVCVLTHDPKFDVPLLEVALRLPDIA 299 (386)
T ss_dssp HHHHHHTCCCTTCEEEECCCCHHHHHHHHHHHTTSSCCS
T ss_pred HhhccccCCCCCcEEEEEECChHhHHHHHHHHhcCCCCC
Confidence 22 6788888889999999999999999887333
No 368
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=96.71 E-value=0.011 Score=55.14 Aligned_cols=180 Identities=11% Similarity=0.091 Sum_probs=107.0
Q ss_pred cchhhhccccceeeccccccchhchhHH---HhcCCCcEEEEEeeecccCCCCcccHHHHHhCCcEEEEcCCCChhHHHH
Q 021995 2 AMKRVASSAINAFASSGFLRSSSRFSRH---YASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAE 78 (304)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~lk~i~~~~~G~d~~~~~~d~~~~~~~gI~v~n~~g~~~~~vAE 78 (304)
||++.-.+.++.-..+.=+.....+... |... .-.|..- +.++ ..-...++..+|+|.|.-|....++
T Consensus 91 A~~~LGg~vi~l~~~~ss~~kgEsl~DTarvLs~~--~D~IviR--~~~~---~~~~~la~~s~vPVING~g~~~HPt-- 161 (358)
T 4h31_A 91 AAFDQGAQVTYIGPSGSQIGDKESMKDTARVLGRM--YDGIQYR--GFGQ---AIVEELGAFAGVPVWNGLTDEFHPT-- 161 (358)
T ss_dssp HHHHTTCEEEEECSSSSCBTTTBCHHHHHHHHHHH--CSEEEEE--CSCH---HHHHHHHHHSSSCEEESCCSSCCHH--
T ss_pred HHHHcCCeEEECCcccccccCccchhHHHHHhhcc--CceeEec--ccch---hHHHHhhhhccCceECCCCcCCCch--
Confidence 4556656665544433334444555433 3332 2334432 2221 1112346678899999655443332
Q ss_pred HHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEeeC--hhhHHHHHHhccCCCeEEEEcCCC-CChh-
Q 021995 79 DELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCG--RIGKLLLQRLKPFNCNLLYHDRVK-MDPQ- 154 (304)
Q Consensus 79 ~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G--~IG~~lA~~l~~~G~~V~~~dr~~-~~~~- 154 (304)
.+|+=++.+.++. .+..+.|.+|++||=+ ++.++.+..+..+|++|.++.|.. .+.+
T Consensus 162 QaL~Dl~Ti~e~~-------------------~~~~l~gl~ia~vGD~~~~va~S~~~~~~~~g~~v~~~~P~~~~p~~~ 222 (358)
T 4h31_A 162 QILADFLTMLEHS-------------------QGKALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEE 222 (358)
T ss_dssp HHHHHHHHHHHTT-------------------TTCCGGGCEEEEESCTTSHHHHHHHHHHHHHTCEEEEESCGGGSCCHH
T ss_pred HHHHHHHHHHHHh-------------------cCCCcCceEEEecCCCCcccchHHHHHHHhcCceEEEeCCcccCCCHH
Confidence 2455555554421 1236889999999954 799999999999999999998754 2221
Q ss_pred -------HHHhcCc--eecCCHHhhcCcCCEEEEcCCCC----hh---------hhccccHHHHhcC-CCCCEEEEcC
Q 021995 155 -------LEKETGA--KFEEDLDTMLPKCDIVVVNTPLT----EK---------TRGMFDKDRIAKM-KKGVLIVNNA 209 (304)
Q Consensus 155 -------~~~~~g~--~~~~~l~ell~~aDvVi~~~p~~----~~---------t~~~i~~~~l~~m-k~g~ilVn~~ 209 (304)
.+.+.|. ....++++.++++|+|..-.-.. ++ ...-++.+.++.+ |++++|..+.
T Consensus 223 ~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~s~~~~~~~~~~~~~~~~~y~v~~~~l~~~ak~~~i~mH~L 300 (358)
T 4h31_A 223 LVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTDVWVSMGESPEAWDERVALMKPYQVNMNVLKQTGNPNVKFMHCL 300 (358)
T ss_dssp HHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHHTTCTTCEEEECS
T ss_pred HHHHHHHHHHHcCCcceeccCHHHHhccCcEEEEEEEEEcccCchhHHHHHHHHhCcccCHHHHHhcCCCCcEEECCC
Confidence 1223343 45679999999999997533211 11 1123677888764 7888888775
No 369
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=96.71 E-value=0.0017 Score=59.70 Aligned_cols=66 Identities=24% Similarity=0.248 Sum_probs=49.1
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEE-EEcCCC-CChhHHH----hcC--ceecCCHHhhcCc--CCEEEEcCCCC
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLL-YHDRVK-MDPQLEK----ETG--AKFEEDLDTMLPK--CDIVVVNTPLT 184 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~-~~dr~~-~~~~~~~----~~g--~~~~~~l~ell~~--aDvVi~~~p~~ 184 (304)
.+|||||+|.+|+..++.+ .-+++|+ ++|+++ ...+.+. +++ ...+.++++++++ .|+|++++|..
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~ 78 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFS 78 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSHH
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCcc
Confidence 4899999999999888777 6678866 678765 3333332 234 3667899999975 89999999843
No 370
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=96.70 E-value=0.0041 Score=58.02 Aligned_cols=67 Identities=19% Similarity=0.236 Sum_probs=48.2
Q ss_pred CEEEEEe-eChhhHH-HH----HHhccCC-CeE----------EEEcCCCCChh-HHHhcCc-eecCCHHhhcCc--CCE
Q 021995 118 KTVGTVG-CGRIGKL-LL----QRLKPFN-CNL----------LYHDRVKMDPQ-LEKETGA-KFEEDLDTMLPK--CDI 176 (304)
Q Consensus 118 ~~vgIIG-~G~IG~~-lA----~~l~~~G-~~V----------~~~dr~~~~~~-~~~~~g~-~~~~~l~ell~~--aDv 176 (304)
.+||||| +|.||+. .+ +.++..+ ..+ .++|+++...+ .++++|+ ..+.++++++++ .|+
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~iD~ 86 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKNDTM 86 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSSCCE
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCE
Confidence 4899999 9999997 66 5555433 222 48888764433 4456777 466899999865 899
Q ss_pred EEEcCCCC
Q 021995 177 VVVNTPLT 184 (304)
Q Consensus 177 Vi~~~p~~ 184 (304)
|++++|..
T Consensus 87 V~i~tp~~ 94 (383)
T 3oqb_A 87 FFDAATTQ 94 (383)
T ss_dssp EEECSCSS
T ss_pred EEECCCch
Confidence 99999964
No 371
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.70 E-value=0.0024 Score=58.98 Aligned_cols=111 Identities=10% Similarity=0.128 Sum_probs=71.7
Q ss_pred CEEEEEeeChhhHHHHHHhcc---------CCCeEE-EEcCCCCChh------HH-Hhc-CceecC--CHHhhcC--cCC
Q 021995 118 KTVGTVGCGRIGKLLLQRLKP---------FNCNLL-YHDRVKMDPQ------LE-KET-GAKFEE--DLDTMLP--KCD 175 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~---------~G~~V~-~~dr~~~~~~------~~-~~~-g~~~~~--~l~ell~--~aD 175 (304)
.+|||||+|.||+.+++.+.. .+.+|. ++|++..... .. ... ....+. ++++++. +.|
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~iD 82 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYD 82 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCCS
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCCC
Confidence 389999999999999998865 467765 5566542111 11 111 122233 8888885 589
Q ss_pred EEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCchh-chHHHHHHHHcCCce
Q 021995 176 IVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIM-DTQAVVDACSSGHIA 229 (304)
Q Consensus 176 vVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~v-d~~aL~~aL~~g~i~ 229 (304)
+|+.++|....... .-+.....|+.|.-+|...-+.+. +-+.|.++.++.+..
T Consensus 83 vVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~ 136 (327)
T 3do5_A 83 VLIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVR 136 (327)
T ss_dssp EEEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCc
Confidence 99999996532111 123456778889888877666654 567788877777664
No 372
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.69 E-value=0.0011 Score=57.51 Aligned_cols=68 Identities=22% Similarity=0.235 Sum_probs=47.2
Q ss_pred CCEEEEEeeChhhHHHHHHh--ccCCCeEE-EEcCCCC-ChhHHHhcCc--eecCCHHhhcCc--CCEEEEcCCCC
Q 021995 117 GKTVGTVGCGRIGKLLLQRL--KPFNCNLL-YHDRVKM-DPQLEKETGA--KFEEDLDTMLPK--CDIVVVNTPLT 184 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l--~~~G~~V~-~~dr~~~-~~~~~~~~g~--~~~~~l~ell~~--aDvVi~~~p~~ 184 (304)
..+++|+|+|++|+.+++.+ ...|++++ ++|.++. ......-.|+ ...+++++++++ .|.+++|+|..
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvPs~ 159 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPST 159 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSCGG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecCch
Confidence 46899999999999999984 45688865 6687664 3222011233 345678888875 89999999943
No 373
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.69 E-value=0.001 Score=60.79 Aligned_cols=89 Identities=19% Similarity=0.193 Sum_probs=66.6
Q ss_pred CCCEEEEEe-eChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHh----hc--CcCCEEEEcCCC
Q 021995 116 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDT----ML--PKCDIVVVNTPL 183 (304)
Q Consensus 116 ~g~~vgIIG-~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~e----ll--~~aDvVi~~~p~ 183 (304)
.|++|.|+| .|.+|..+++.++..|++|++.++++.+.+.++++|.... .++.+ +. ...|+++.++..
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 219 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQ 219 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCG
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCCh
Confidence 688999999 8999999999999999999999987766667777775321 12222 22 258898888763
Q ss_pred ChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 184 TEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
+ . -...++.++++..+|.++.
T Consensus 220 -~----~-~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 220 -D----T-WLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp -G----G-HHHHHTTEEEEEEEEECCC
T ss_pred -H----H-HHHHHHHhcCCCEEEEEec
Confidence 1 1 2567888899999998873
No 374
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.66 E-value=0.0018 Score=62.22 Aligned_cols=115 Identities=16% Similarity=0.215 Sum_probs=74.6
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCC--C--hhHHHhcCceec--CCHHhhcCc-CCEEEEc--CCC-
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKM--D--PQLEKETGAKFE--EDLDTMLPK-CDIVVVN--TPL- 183 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~--~--~~~~~~~g~~~~--~~l~ell~~-aDvVi~~--~p~- 183 (304)
++.|++|.|||.|..|.++|+.|+..|++|.++|.... + .+..++.|+... ...++++.+ +|+|++. +|.
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~~ 85 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYN 85 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCTT
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCCC
Confidence 57899999999999999999999999999999998542 1 123345576432 223456666 8999876 332
Q ss_pred Chhhh-------ccccH-HHHhcCCCC-CEEEEcCCCchhchHHHHHHHHcCCc
Q 021995 184 TEKTR-------GMFDK-DRIAKMKKG-VLIVNNARGAIMDTQAVVDACSSGHI 228 (304)
Q Consensus 184 ~~~t~-------~~i~~-~~l~~mk~g-~ilVn~~rg~~vd~~aL~~aL~~g~i 228 (304)
+|... .++.+ +++..+.+. .+-|--+.|+.-...-+...|+....
T Consensus 86 ~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~ 139 (451)
T 3lk7_A 86 NPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGGQ 139 (451)
T ss_dssp SHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTTC
T ss_pred ChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCC
Confidence 22211 12332 344443333 34444456888777777788876553
No 375
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.65 E-value=0.0013 Score=60.73 Aligned_cols=95 Identities=13% Similarity=0.100 Sum_probs=60.9
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCC--eEEEEcCCCCChhH-H----Hh--c----CceecCCHHhhcCcCCEEEEcCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQL-E----KE--T----GAKFEEDLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~--~V~~~dr~~~~~~~-~----~~--~----g~~~~~~l~ell~~aDvVi~~~p 182 (304)
..++|+|||.|.||..+|..+...|+ +|..+|.+....+. + .. + .+....++++ +++||+|+++..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG 98 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAG 98 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCC
Confidence 56899999999999999999987776 89999986432211 1 11 0 1122346655 899999999864
Q ss_pred CCh---hhh-ccc--cH-------HHHhcCCCCCEEEEcCCC
Q 021995 183 LTE---KTR-GMF--DK-------DRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 183 ~~~---~t~-~~i--~~-------~~l~~mk~g~ilVn~~rg 211 (304)
... .++ .++ |. +.+....|++++++++..
T Consensus 99 ~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNP 140 (330)
T 3ldh_A 99 ARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPEL 140 (330)
T ss_dssp CCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCc
Confidence 321 011 111 11 123334789999999854
No 376
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.65 E-value=0.0015 Score=54.60 Aligned_cols=68 Identities=19% Similarity=0.147 Sum_probs=48.4
Q ss_pred CCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCcee-------cCCHHhhcCcCCEEEEcCCCC
Q 021995 117 GKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF-------EEDLDTMLPKCDIVVVNTPLT 184 (304)
Q Consensus 117 g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-------~~~l~ell~~aDvVi~~~p~~ 184 (304)
+++|.|.|. |.||+.+++.|...|++|++.+|++.+.......++.. .+++.++++++|+|+.+....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~ 78 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR 78 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCC
Confidence 479999997 99999999999999999999998753221110112211 124567788999998887643
No 377
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.64 E-value=0.00084 Score=62.40 Aligned_cols=90 Identities=18% Similarity=0.158 Sum_probs=66.6
Q ss_pred CCCEEEEEe-eChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHhhc-----CcCCEEEEcCCCC
Q 021995 116 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML-----PKCDIVVVNTPLT 184 (304)
Q Consensus 116 ~g~~vgIIG-~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell-----~~aDvVi~~~p~~ 184 (304)
.|++|.|+| .|.+|..+++.++..|++|++.+++....+.++++|+... .++.+.+ ...|+++-++..
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~- 241 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG- 241 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCT-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCH-
Confidence 588999999 7999999999999999999999987655566667775421 2333322 247999888763
Q ss_pred hhhhccccHHHHhcCCCCCEEEEcCCC
Q 021995 185 EKTRGMFDKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 185 ~~t~~~i~~~~l~~mk~g~ilVn~~rg 211 (304)
+ .-...++.|+++..+|.++..
T Consensus 242 ~-----~~~~~~~~l~~~G~iv~~g~~ 263 (362)
T 2c0c_A 242 A-----MFDLAVDALATKGRLIVIGFI 263 (362)
T ss_dssp H-----HHHHHHHHEEEEEEEEECCCG
T ss_pred H-----HHHHHHHHHhcCCEEEEEeCC
Confidence 1 125677888888899988753
No 378
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=96.63 E-value=0.0012 Score=59.39 Aligned_cols=38 Identities=16% Similarity=0.154 Sum_probs=34.7
Q ss_pred cccCCCEEEEEe-eChhhHHHHHHhccCCCeEEEEcCCC
Q 021995 113 YDLEGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVK 150 (304)
Q Consensus 113 ~~L~g~~vgIIG-~G~IG~~lA~~l~~~G~~V~~~dr~~ 150 (304)
.++.|+++.|+| .|.+|+.+++.|...|++|++++|+.
T Consensus 115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 357899999999 99999999999999999999999964
No 379
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.63 E-value=0.0026 Score=56.22 Aligned_cols=66 Identities=18% Similarity=0.215 Sum_probs=49.5
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec----CCHHhhcCcCCEEEEcCCCC
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----EDLDTMLPKCDIVVVNTPLT 184 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~----~~l~ell~~aDvVi~~~p~~ 184 (304)
.++|.|.|.|.||+.+++.|...|++|++.+|+..........+++.. .+++ +.++|+|+.+....
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAPD 74 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCCB
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCCcc
Confidence 479999999999999999999999999999997654443333444321 2333 78899998877643
No 380
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.62 E-value=0.0093 Score=55.65 Aligned_cols=90 Identities=14% Similarity=0.206 Sum_probs=56.6
Q ss_pred CCCEEEEEe-eChhhHHHHHHhccCC-CeEEEEcCCCCC-hhHHHhc----Cc---e-ecCCHHhhcCcCCEEEEcCCCC
Q 021995 116 EGKTVGTVG-CGRIGKLLLQRLKPFN-CNLLYHDRVKMD-PQLEKET----GA---K-FEEDLDTMLPKCDIVVVNTPLT 184 (304)
Q Consensus 116 ~g~~vgIIG-~G~IG~~lA~~l~~~G-~~V~~~dr~~~~-~~~~~~~----g~---~-~~~~l~ell~~aDvVi~~~p~~ 184 (304)
...+|+|+| +|.+|+.+++.|.... +++.++...... ......+ +. . ...+ ++.+.++|+|++|+|..
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~atp~~ 93 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPHG 93 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECCCTT
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcCCch
Confidence 346899999 9999999999997654 577766543211 1111111 11 0 1122 45567899999999854
Q ss_pred hhhhccccHHHHhcCCCCCEEEEcCCCc
Q 021995 185 EKTRGMFDKDRIAKMKKGVLIVNNARGA 212 (304)
Q Consensus 185 ~~t~~~i~~~~l~~mk~g~ilVn~~rg~ 212 (304)
.. .+.....+.|+.+|+.+...
T Consensus 94 ~s------~~~a~~~~aG~~VId~sa~~ 115 (359)
T 1xyg_A 94 TT------QEIIKELPTALKIVDLSADF 115 (359)
T ss_dssp TH------HHHHHTSCTTCEEEECSSTT
T ss_pred hH------HHHHHHHhCCCEEEECCccc
Confidence 32 33333337789999998643
No 381
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.62 E-value=0.00075 Score=61.84 Aligned_cols=90 Identities=21% Similarity=0.153 Sum_probs=66.0
Q ss_pred CCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHH-HhcCceec-----CCHHhhc-----CcCCEEEEcCCC
Q 021995 116 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLE-KETGAKFE-----EDLDTML-----PKCDIVVVNTPL 183 (304)
Q Consensus 116 ~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~~~-----~~l~ell-----~~aDvVi~~~p~ 183 (304)
.|++|.|+|. |.||..+++.++..|++|++.+++....+.+ +++|+... .++.+.+ ...|+++.+...
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 228 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGG 228 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCc
Confidence 6889999998 9999999999999999999999876555555 66665321 1222222 247888887762
Q ss_pred ChhhhccccHHHHhcCCCCCEEEEcCCC
Q 021995 184 TEKTRGMFDKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~mk~g~ilVn~~rg 211 (304)
+ .-...+..|+++..+|.++..
T Consensus 229 -~-----~~~~~~~~l~~~G~iv~~G~~ 250 (336)
T 4b7c_A 229 -E-----ILDTVLTRIAFKARIVLCGAI 250 (336)
T ss_dssp -H-----HHHHHHTTEEEEEEEEECCCG
T ss_pred -c-----hHHHHHHHHhhCCEEEEEeec
Confidence 1 125677888999999988743
No 382
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.62 E-value=0.00095 Score=61.79 Aligned_cols=89 Identities=21% Similarity=0.219 Sum_probs=66.6
Q ss_pred CCCEEEEE-eeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHhhc-----CcCCEEEEcCCCC
Q 021995 116 EGKTVGTV-GCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML-----PKCDIVVVNTPLT 184 (304)
Q Consensus 116 ~g~~vgII-G~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell-----~~aDvVi~~~p~~ 184 (304)
.|++|.|+ |.|.||..+++.++..|++|++.++++.+.+.++++|.... .++.+.+ ...|+++.++...
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~ 246 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAA 246 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCGG
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCHH
Confidence 68899999 68999999999999999999999987766666777775421 1232222 2589998887632
Q ss_pred hhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 185 EKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 185 ~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
.-...+..|+++..++.++.
T Consensus 247 ------~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 247 ------YFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp ------GHHHHHHTEEEEEEEEECCC
T ss_pred ------HHHHHHHHhccCCEEEEEEe
Confidence 12567788899999998873
No 383
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=96.62 E-value=0.024 Score=52.13 Aligned_cols=130 Identities=5% Similarity=-0.001 Sum_probs=85.1
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEE-----EeeChhhHH
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGT-----VGCGRIGKL 131 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgI-----IG~G~IG~~ 131 (304)
.++-.+|+|.|.-+....++ .+|+-++.+.+++ |. ..+. .+|++ +|=+++.++
T Consensus 130 lA~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~---------g~----------~~l~-l~ia~a~~~~vGD~rva~S 187 (324)
T 1js1_X 130 FIQHSGRPVFSMEAATRHPL--QSFADLITIEEYK---------KT----------ARPK-VVMTWAPHPRPLPQAVPNS 187 (324)
T ss_dssp HHHHSSSCEEESSCSSCCHH--HHHHHHHHHHHHC---------SS----------SSCE-EEEECCCCSSCCCSHHHHH
T ss_pred HHhhCCCCEEECCCCCCCcH--HHHHHHHHHHHHc---------CC----------CCee-EEEEEEcccccCCcchHHH
Confidence 34566799999655333332 3455555555421 10 1356 79999 999999999
Q ss_pred HHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCC--h---------hhhccccHHHHhcCC
Q 021995 132 LLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLT--E---------KTRGMFDKDRIAKMK 200 (304)
Q Consensus 132 lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~--~---------~t~~~i~~~~l~~mk 200 (304)
++..+..+|++|.+..|...........++....++++.++++|+|....=.. . .....++.+.++.+|
T Consensus 188 l~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~w~s~g~~~~~~~~~r~~~y~vt~e~l~~a~ 267 (324)
T 1js1_X 188 FAEWMNATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKNWAAYTGDNYGQILSTDRNWTVGDRQMAVTN 267 (324)
T ss_dssp HHHHHHTSSSEEEEECCTTCCCCHHHHTTCEEESCHHHHHTTCSEEEECCCCCCSTTCTTCCCCCCTTSSBCHHHHTTSS
T ss_pred HHHHHHHCCCEEEEeCCcccCCChhhccceEEECCHHHHhCCCCEEEecCcccCCCccccchHHHhcCcccCHHHHHhcC
Confidence 99999999999999998653222211135666789999999999998743211 0 012445777777777
Q ss_pred CCCEEEEcC
Q 021995 201 KGVLIVNNA 209 (304)
Q Consensus 201 ~g~ilVn~~ 209 (304)
+++|..+.
T Consensus 268 -~ai~MHcL 275 (324)
T 1js1_X 268 -NAYFMHCL 275 (324)
T ss_dssp -SCEEECCS
T ss_pred -CcEEECCC
Confidence 77766553
No 384
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=96.62 E-value=0.0017 Score=61.91 Aligned_cols=89 Identities=16% Similarity=0.067 Sum_probs=67.1
Q ss_pred CCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCH------------------------H--
Q 021995 116 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDL------------------------D-- 168 (304)
Q Consensus 116 ~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l------------------------~-- 168 (304)
.|++|.|+|. |.||..+++.++..|++|++.+++..+.+.++++|+..+-+. +
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 299 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLV 299 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHH
Confidence 6899999998 999999999999999999988877666667777776422111 1
Q ss_pred -hh-cCcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 169 -TM-LPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 169 -el-l~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
++ -...|+++-++.. + . -...+..|+++..+|+++.
T Consensus 300 ~~~~g~g~Dvvid~~G~-~----~-~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 300 VEKAGREPDIVFEHTGR-V----T-FGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHSSCCSEEEECSCH-H----H-HHHHHHHSCTTCEEEESCC
T ss_pred HHHhCCCceEEEECCCc-h----H-HHHHHHHHhcCCEEEEEec
Confidence 11 1358999988763 1 1 2567788999999999974
No 385
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.61 E-value=0.00094 Score=62.84 Aligned_cols=95 Identities=15% Similarity=0.125 Sum_probs=68.0
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHHHhcCceec----CCH-Hh----hcC--cCCEEEEcCCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFE----EDL-DT----MLP--KCDIVVVNTPL 183 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~----~~l-~e----ll~--~aDvVi~~~p~ 183 (304)
.|++|.|+|.|.+|...++.++.+|+ +|++.+++....+.++++|+..+ .++ .+ +.. ..|+|+-++..
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~ 264 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGVDAVGF 264 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEEEECCCC
Confidence 68899999999999999999999999 89999987766677777776422 121 22 221 58999988864
Q ss_pred Chh----------hhccccHHHHhcCCCCCEEEEcCCC
Q 021995 184 TEK----------TRGMFDKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 184 ~~~----------t~~~i~~~~l~~mk~g~ilVn~~rg 211 (304)
... .... -.+.++.++++..++.++..
T Consensus 265 ~~~~~~~~~~~~~~~~~-~~~~~~~l~~gG~iv~~G~~ 301 (398)
T 2dph_A 265 EAHGLGDEANTETPNGA-LNSLFDVVRAGGAIGIPGIY 301 (398)
T ss_dssp TCBCSGGGTTSBCTTHH-HHHHHHHEEEEEEEECCSCC
T ss_pred ccccccccccccccHHH-HHHHHHHHhcCCEEEEeccc
Confidence 310 0001 25677888999999888743
No 386
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=96.57 E-value=0.0071 Score=55.32 Aligned_cols=98 Identities=24% Similarity=0.314 Sum_probs=61.6
Q ss_pred CEEEEEee-ChhhHHHHHHhccCC--CeEEEEcCCCCChhHHHhcC-------cee---cCCHHhhcCcCCEEEEcCCCC
Q 021995 118 KTVGTVGC-GRIGKLLLQRLKPFN--CNLLYHDRVKMDPQLEKETG-------AKF---EEDLDTMLPKCDIVVVNTPLT 184 (304)
Q Consensus 118 ~~vgIIG~-G~IG~~lA~~l~~~G--~~V~~~dr~~~~~~~~~~~g-------~~~---~~~l~ell~~aDvVi~~~p~~ 184 (304)
++|+|||. |.+|..++..|...| .+|..+|++. ....+.++. +.. ..++++.+++||+|+++....
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~-~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~ 79 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVP 79 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS-HHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc-cHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcC
Confidence 47999998 999999999998777 6899999865 222222221 122 136788899999999987432
Q ss_pred hh---hh-cc------ccHH---HHhcCCCCCEEEEcCCCchhchHH
Q 021995 185 EK---TR-GM------FDKD---RIAKMKKGVLIVNNARGAIMDTQA 218 (304)
Q Consensus 185 ~~---t~-~~------i~~~---~l~~mk~g~ilVn~~rg~~vd~~a 218 (304)
.. ++ .+ +-.+ .+....+++++|+++. .+|.-.
T Consensus 80 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN--Pv~~~~ 124 (314)
T 1mld_A 80 RKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN--PVNSTI 124 (314)
T ss_dssp CCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS--CHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC--CcchhH
Confidence 11 10 01 0111 2222358899999854 455443
No 387
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=96.57 E-value=0.0011 Score=61.22 Aligned_cols=89 Identities=22% Similarity=0.232 Sum_probs=63.6
Q ss_pred CCCEEEEE-eeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec----CCHHhhc-----CcCCEEEEcCCCCh
Q 021995 116 EGKTVGTV-GCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE----EDLDTML-----PKCDIVVVNTPLTE 185 (304)
Q Consensus 116 ~g~~vgII-G~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~----~~l~ell-----~~aDvVi~~~p~~~ 185 (304)
.|++|.|+ |.|.+|...++.++.+|++|++.+++..+.+.++++|+... +++.+.+ ...|+++-++....
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g~~~ 229 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDM 229 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSCHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCCchH
Confidence 68999999 69999999999999999999999987666667777775422 2222222 24788887765211
Q ss_pred hhhccccHHHHhcCCCCCEEEEcC
Q 021995 186 KTRGMFDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 186 ~t~~~i~~~~l~~mk~g~ilVn~~ 209 (304)
. -...++.++++..+|.++
T Consensus 230 ----~-~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 230 ----Y-YDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp ----H-HHHHHHHEEEEEEEEESS
T ss_pred ----H-HHHHHHHhccCCEEEEEC
Confidence 1 145667778888887775
No 388
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.56 E-value=0.0028 Score=58.61 Aligned_cols=91 Identities=19% Similarity=0.141 Sum_probs=65.6
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCe-EEEEcCCCCChhHHHhcCce---ec------CCHH----hhc--CcCCEEEE
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCN-LLYHDRVKMDPQLEKETGAK---FE------EDLD----TML--PKCDIVVV 179 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~-V~~~dr~~~~~~~~~~~g~~---~~------~~l~----ell--~~aDvVi~ 179 (304)
.|++|.|+|.|.+|...++.++.+|++ |++.++++.+.+.+++++.. +. .++. ++. ...|+++-
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid 258 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALE 258 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEEE
Confidence 588999999999999999999999998 89998877666666665211 10 1121 122 35899999
Q ss_pred cCCCChhhhccccHHHHhcCCCCCEEEEcCCC
Q 021995 180 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 180 ~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg 211 (304)
++..... -...++.++++..+|.++-.
T Consensus 259 ~~g~~~~-----~~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 259 CTGVESS-----IAAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp CSCCHHH-----HHHHHHHSCTTCEEEECCCC
T ss_pred CCCChHH-----HHHHHHHhcCCCEEEEEccC
Confidence 8863211 15677889999999998743
No 389
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.56 E-value=0.001 Score=61.12 Aligned_cols=89 Identities=25% Similarity=0.209 Sum_probs=63.1
Q ss_pred CCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHH-hcCceec------CCHHhhc-----CcCCEEEEcCC
Q 021995 116 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-ETGAKFE------EDLDTML-----PKCDIVVVNTP 182 (304)
Q Consensus 116 ~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~------~~l~ell-----~~aDvVi~~~p 182 (304)
.|++|.|+|. |.+|..+++.++..|++|++.+++....+.++ ++|.... .++.+.+ ...|+++.+..
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g 234 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVG 234 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCC
Confidence 5889999997 99999999999999999999998765555555 4664321 1232222 24788887775
Q ss_pred CChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 183 LTEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 183 ~~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
. + .-...++.++++..+|.++-
T Consensus 235 ~-~-----~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 235 G-K-----MLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp H-H-----HHHHHHTTEEEEEEEEECCC
T ss_pred H-H-----HHHHHHHHHhcCCEEEEEcc
Confidence 2 1 12566777888888888763
No 390
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=96.53 E-value=0.0074 Score=55.07 Aligned_cols=108 Identities=16% Similarity=0.120 Sum_probs=74.0
Q ss_pred ccCCCEEEEE-ee-ChhhHHHHHHhccCCCeEE-EEcCCCCChhHHHhcCceecCCHHhhcC--cCCEEEEcCCCChhhh
Q 021995 114 DLEGKTVGTV-GC-GRIGKLLLQRLKPFNCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTR 188 (304)
Q Consensus 114 ~L~g~~vgII-G~-G~IG~~lA~~l~~~G~~V~-~~dr~~~~~~~~~~~g~~~~~~l~ell~--~aDvVi~~~p~~~~t~ 188 (304)
-+..++++|| |+ |+.|+.+++.++..|++++ .+++.....+ -.|...+.+++|+.+ ..|++++++|.. ...
T Consensus 10 l~~~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~~---i~G~~vy~sl~el~~~~~vD~avI~vP~~-~~~ 85 (305)
T 2fp4_A 10 YVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKT---HLGLPVFNTVKEAKEQTGATASVIYVPPP-FAA 85 (305)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCE---ETTEEEESSHHHHHHHHCCCEEEECCCHH-HHH
T ss_pred HhCCCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcce---ECCeeeechHHHhhhcCCCCEEEEecCHH-HHH
Confidence 3567889999 99 9999999999999999944 5665421111 246777778999988 899999999943 222
Q ss_pred ccccHHHHhcCCCC-CEEEEcCCCch-hchHHHHHHHHcC-Cce
Q 021995 189 GMFDKDRIAKMKKG-VLIVNNARGAI-MDTQAVVDACSSG-HIA 229 (304)
Q Consensus 189 ~~i~~~~l~~mk~g-~ilVn~~rg~~-vd~~aL~~aL~~g-~i~ 229 (304)
..+ ++..+ .| ..+|+.+-|-. -++..+.+..++. .+.
T Consensus 86 ~~~-~e~i~---~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~ 125 (305)
T 2fp4_A 86 AAI-NEAID---AEVPLVVCITEGIPQQDMVRVKHRLLRQGKTR 125 (305)
T ss_dssp HHH-HHHHH---TTCSEEEECCCCCCHHHHHHHHHHHTTCSSCE
T ss_pred HHH-HHHHH---CCCCEEEEECCCCChHHHHHHHHHHHhcCCcE
Confidence 222 23332 23 34567777753 3455788888887 655
No 391
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=96.52 E-value=0.0095 Score=57.40 Aligned_cols=96 Identities=18% Similarity=0.152 Sum_probs=67.1
Q ss_pred ccCCCEEEEEeeC----------hhhHHHHHHhccCCCeEEEEcCCCCChhHHHhc-------------CceecCCHHhh
Q 021995 114 DLEGKTVGTVGCG----------RIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET-------------GAKFEEDLDTM 170 (304)
Q Consensus 114 ~L~g~~vgIIG~G----------~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~-------------g~~~~~~l~el 170 (304)
.+.|++|+|+|+. .-...+++.|...|++|.+|||.-...+....+ ++....++.+.
T Consensus 326 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (467)
T 2q3e_A 326 TVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEA 405 (467)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHHHHEEECSSHHHH
T ss_pred ccCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhccccccccccccCceeecCCHHHH
Confidence 4789999999985 367889999999999999999964222211111 23445678889
Q ss_pred cCcCCEEEEcCCCChhhhccccHHH-HhcCCCCCEEEEcCCCc
Q 021995 171 LPKCDIVVVNTPLTEKTRGMFDKDR-IAKMKKGVLIVNNARGA 212 (304)
Q Consensus 171 l~~aDvVi~~~p~~~~t~~~i~~~~-l~~mk~g~ilVn~~rg~ 212 (304)
++++|+|++++... +.+. ++-+. ...|+...+++|. |+-
T Consensus 406 ~~~ad~~vi~t~~~-~f~~-~~~~~~~~~~~~~~~i~D~-r~~ 445 (467)
T 2q3e_A 406 CDGAHAVVICTEWD-MFKE-LDYERIHKKMLKPAFIFDG-RRV 445 (467)
T ss_dssp HTTCSEEEECSCCG-GGGG-SCHHHHHHHSCSSCEEEES-SCT
T ss_pred HhCCcEEEEecCCh-hhhc-CCHHHHHHhcCCCCEEEeC-CCc
Confidence 99999999999864 3332 34444 4567766668876 443
No 392
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=96.52 E-value=0.0028 Score=57.99 Aligned_cols=114 Identities=16% Similarity=0.166 Sum_probs=65.9
Q ss_pred CEEEEEeeChhhHHHHHHhccCC--CeEEEEcCCCCChhH-HHhc--------CceecCCHHhhcCcCCEEEEcCCCChh
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFN--CNLLYHDRVKMDPQL-EKET--------GAKFEEDLDTMLPKCDIVVVNTPLTEK 186 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G--~~V~~~dr~~~~~~~-~~~~--------g~~~~~~l~ell~~aDvVi~~~p~~~~ 186 (304)
++|+|||.|.+|..++..+...+ -++..+|.+..+.+. +.++ ......+..+.+++||+|+++.+....
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~~ 80 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQR 80 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 48999999999999999887655 579999986422221 1111 111111235679999999998764321
Q ss_pred -----------hhcccc--HHHHhcCCCCCEEEEcCCCchhchHHHHHH--HHcCCceEE
Q 021995 187 -----------TRGMFD--KDRIAKMKKGVLIVNNARGAIMDTQAVVDA--CSSGHIAGY 231 (304)
Q Consensus 187 -----------t~~~i~--~~~l~~mk~g~ilVn~~rg~~vd~~aL~~a--L~~g~i~ga 231 (304)
+..++. .+.+....|++++++++..-=+....+.+. +...++.|.
T Consensus 81 ~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~ 140 (310)
T 2xxj_A 81 PGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQVAYALSGLPPGRVVGS 140 (310)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCGGGEEEC
T ss_pred CCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCchHHHHHHHHHHcCCCHHHEEec
Confidence 011110 012223378999999865433333333333 333355444
No 393
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=96.51 E-value=0.0013 Score=59.89 Aligned_cols=88 Identities=22% Similarity=0.181 Sum_probs=68.2
Q ss_pred CCCEEEEEe-eChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-----CC-HHhhcCcCCEEEEcCCCChhhh
Q 021995 116 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----ED-LDTMLPKCDIVVVNTPLTEKTR 188 (304)
Q Consensus 116 ~g~~vgIIG-~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~-l~ell~~aDvVi~~~p~~~~t~ 188 (304)
.|++|.|+| .|.+|...++.++.+|++|++.++.. ..+.++++|+... .+ +.+.+...|+++-++...
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~~---- 226 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGD---- 226 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSCHH----
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCCcH----
Confidence 688999997 99999999999999999998887533 3566777776421 23 566677899999888631
Q ss_pred ccccHHHHhcCCCCCEEEEcCC
Q 021995 189 GMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn~~r 210 (304)
.. ...++.++++..+|.++.
T Consensus 227 -~~-~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 227 -VG-IQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp -HH-HHHGGGEEEEEEEEECCS
T ss_pred -HH-HHHHHhccCCCEEEEeCC
Confidence 12 577889999999999864
No 394
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=96.50 E-value=0.0038 Score=56.56 Aligned_cols=90 Identities=13% Similarity=0.168 Sum_probs=59.2
Q ss_pred CEEEEEe-eChhhHHHHHHhc-cCCCeEE-EEcCCCCCh-----hHH---HhcCceecCCHHhhcCcCCEEEEcCCCChh
Q 021995 118 KTVGTVG-CGRIGKLLLQRLK-PFNCNLL-YHDRVKMDP-----QLE---KETGAKFEEDLDTMLPKCDIVVVNTPLTEK 186 (304)
Q Consensus 118 ~~vgIIG-~G~IG~~lA~~l~-~~G~~V~-~~dr~~~~~-----~~~---~~~g~~~~~~l~ell~~aDvVi~~~p~~~~ 186 (304)
.+|+|+| +|+||+.+++.+. .-+++++ ++|+++... ... ...|+..+.++++++.++|+|+-+.+ ++
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~--p~ 99 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQ--PQ 99 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSC--HH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCC--HH
Confidence 4899999 9999999999876 4588855 567754211 111 12456667899999999999987765 22
Q ss_pred hhccccHHHHhcCCCCCEEEEcCCCc
Q 021995 187 TRGMFDKDRIAKMKKGVLIVNNARGA 212 (304)
Q Consensus 187 t~~~i~~~~l~~mk~g~ilVn~~rg~ 212 (304)
. . .......++.|.-+|-...|-
T Consensus 100 a--~-~~~~~~~l~~Gv~vViGTTG~ 122 (288)
T 3ijp_A 100 A--S-VLYANYAAQKSLIHIIGTTGF 122 (288)
T ss_dssp H--H-HHHHHHHHHHTCEEEECCCCC
T ss_pred H--H-HHHHHHHHHcCCCEEEECCCC
Confidence 1 1 122223345666677666663
No 395
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=96.48 E-value=0.0066 Score=56.47 Aligned_cols=92 Identities=18% Similarity=0.210 Sum_probs=67.1
Q ss_pred CCCEEEEEe-eChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHh-hc--CcCCEEEEcCCCChh
Q 021995 116 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDT-ML--PKCDIVVVNTPLTEK 186 (304)
Q Consensus 116 ~g~~vgIIG-~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~e-ll--~~aDvVi~~~p~~~~ 186 (304)
.|++|.|+| .|.+|..+++.++..|++|++.++ ....+.++++|+... .++.+ +. ...|+++-++.....
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~ 261 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTE 261 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCChhh
Confidence 688999999 799999999999999999988874 455666777776421 12322 22 368999998874311
Q ss_pred hhccccHHHHhcCCCCCEEEEcCCCc
Q 021995 187 TRGMFDKDRIAKMKKGVLIVNNARGA 212 (304)
Q Consensus 187 t~~~i~~~~l~~mk~g~ilVn~~rg~ 212 (304)
+ -...+..++++..+|.++...
T Consensus 262 ~----~~~~~~~l~~~G~iv~~g~~~ 283 (375)
T 2vn8_A 262 T----WAPDFLKKWSGATYVTLVTPF 283 (375)
T ss_dssp H----HGGGGBCSSSCCEEEESCCSH
T ss_pred h----hHHHHHhhcCCcEEEEeCCCc
Confidence 1 134567789999999998654
No 396
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=96.46 E-value=0.051 Score=50.55 Aligned_cols=129 Identities=16% Similarity=0.148 Sum_probs=86.9
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCccccccccccc-ccCCCE--EEEEee---C--hh
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAY-DLEGKT--VGTVGC---G--RI 128 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~-~L~g~~--vgIIG~---G--~I 128 (304)
.++-.+|+|.|.-... .++ .+|+-++.+.+++ |. .+.|++ |+++|= | ++
T Consensus 152 lA~~~~vPVINag~g~-HPt--QaLaDl~TI~E~~--------------------g~~~l~glkvvva~vGDl~~~~nrv 208 (359)
T 1zq6_A 152 FAKYSPVPVINMETIT-HPC--QELAHALALQEHF--------------------GTPDLRGKKYVLTWTYHPKPLNTAV 208 (359)
T ss_dssp HHHHCSSCEEESSSSC-CHH--HHHHHHHHHHHHH--------------------TSSCCTTCEEEEEECCCSSCCCSHH
T ss_pred HHHhCCCCEEeCCCCC-CcH--HHHHHHHHHHHHh--------------------CCCcccCCeeEEEEEecccccccch
Confidence 4566789999975544 332 3455555554421 11 278999 999996 4 89
Q ss_pred hHHHHHHhccCCCeEEEEcCC-C-CCh-hHH-------HhcC--ceecCCHHhhcCcCCEEEEcCCCC-----h------
Q 021995 129 GKLLLQRLKPFNCNLLYHDRV-K-MDP-QLE-------KETG--AKFEEDLDTMLPKCDIVVVNTPLT-----E------ 185 (304)
Q Consensus 129 G~~lA~~l~~~G~~V~~~dr~-~-~~~-~~~-------~~~g--~~~~~~l~ell~~aDvVi~~~p~~-----~------ 185 (304)
.++++..+..+|++|.+..|. . ... +.. ++.| +....++++.++++|+|....=.. +
T Consensus 209 a~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvVyt~~w~se~~mg~~~~~~~ 288 (359)
T 1zq6_A 209 ANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKP 288 (359)
T ss_dssp HHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCSEEEEECCCCGGGTTCCTTHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEECCccccccCCcchhhHH
Confidence 999999999999999999886 3 222 221 1334 345679999999999998765222 1
Q ss_pred ----hhhccccHHHHhcCCCCCEEEEcC
Q 021995 186 ----KTRGMFDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 186 ----~t~~~i~~~~l~~mk~g~ilVn~~ 209 (304)
.....++.+.++.+| +++|..+.
T Consensus 289 ~~~~~~~y~vt~e~l~~a~-~ai~MHcL 315 (359)
T 1zq6_A 289 IRDQYQHFIVDERKMALTN-NGVFSHCL 315 (359)
T ss_dssp HHGGGGGGSBCHHHHHTSS-SCEEECCS
T ss_pred HHHHhcCCCCCHHHHHhCC-CCEEECCC
Confidence 012346788888888 88877664
No 397
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=96.46 E-value=0.013 Score=54.26 Aligned_cols=88 Identities=17% Similarity=0.129 Sum_probs=54.2
Q ss_pred CEEEEEe-eChhhHHHHHHhccCC-CeEEEEcCCCCCh-hHHHh---c-C--ceecCCHHhhcCcCCEEEEcCCCChhhh
Q 021995 118 KTVGTVG-CGRIGKLLLQRLKPFN-CNLLYHDRVKMDP-QLEKE---T-G--AKFEEDLDTMLPKCDIVVVNTPLTEKTR 188 (304)
Q Consensus 118 ~~vgIIG-~G~IG~~lA~~l~~~G-~~V~~~dr~~~~~-~~~~~---~-g--~~~~~~l~ell~~aDvVi~~~p~~~~t~ 188 (304)
.+|||+| +|.+|+.+.+.|.... ++++++.+..... ..... + + -..+.++++ +.++|+|++|+|.....
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~~~s~- 82 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPHGVFA- 82 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCTTHHH-
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCcHHHH-
Confidence 5899999 8999999999997654 5776655432211 11110 1 1 011234444 57899999999965331
Q ss_pred ccccHHHHhcCCCCCEEEEcCCC
Q 021995 189 GMFDKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn~~rg 211 (304)
... . ..++.|..+|+.+-.
T Consensus 83 ~~a-~---~~~~aG~~VId~Sa~ 101 (345)
T 2ozp_A 83 REF-D---RYSALAPVLVDLSAD 101 (345)
T ss_dssp HTH-H---HHHTTCSEEEECSST
T ss_pred HHH-H---HHHHCCCEEEEcCcc
Confidence 111 1 224678899998863
No 398
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.45 E-value=0.0026 Score=59.14 Aligned_cols=89 Identities=12% Similarity=0.091 Sum_probs=64.9
Q ss_pred CCCEEEEEe-eChhhHHHHHHhcc-CCCeEEEEcCCCCChhHHHhcCceec----CCHHhhc-----CcCCEEEEcCCCC
Q 021995 116 EGKTVGTVG-CGRIGKLLLQRLKP-FNCNLLYHDRVKMDPQLEKETGAKFE----EDLDTML-----PKCDIVVVNTPLT 184 (304)
Q Consensus 116 ~g~~vgIIG-~G~IG~~lA~~l~~-~G~~V~~~dr~~~~~~~~~~~g~~~~----~~l~ell-----~~aDvVi~~~p~~ 184 (304)
.|++|.|+| .|.+|...++.++. .|.+|++.++++.+.+.++++|+..+ +++.+.+ ...|+|+-++...
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g~~ 250 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTD 250 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECSCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECCCch
Confidence 688999999 99999999999997 59999999987766677777876422 2232222 2578888877522
Q ss_pred hhhhccccHHHHhcCCCCCEEEEcC
Q 021995 185 EKTRGMFDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 185 ~~t~~~i~~~~l~~mk~g~ilVn~~ 209 (304)
+ . -...++.++++..+|.++
T Consensus 251 ~----~-~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 251 K----H-AAEIADLIAPQGRFCLID 270 (363)
T ss_dssp H----H-HHHHHHHSCTTCEEEECS
T ss_pred h----h-HHHHHHHhcCCCEEEEEC
Confidence 1 1 146677888888888774
No 399
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.45 E-value=0.0016 Score=61.67 Aligned_cols=66 Identities=15% Similarity=0.179 Sum_probs=46.8
Q ss_pred CEEEEEeeChhhHHHHHHhccCC---CeEEEEcCCCCChhHH-Hhc------Ccee-------cCCHHhhcCc--CCEEE
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFN---CNLLYHDRVKMDPQLE-KET------GAKF-------EEDLDTMLPK--CDIVV 178 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G---~~V~~~dr~~~~~~~~-~~~------g~~~-------~~~l~ell~~--aDvVi 178 (304)
++|+|+|.|.||+.+++.|...| .+|.+++|+..+.+.. .++ .+.. .+++++++++ +|+|+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 58999999999999999998887 3899999976433222 111 1211 1345667777 89999
Q ss_pred EcCCC
Q 021995 179 VNTPL 183 (304)
Q Consensus 179 ~~~p~ 183 (304)
.++|.
T Consensus 82 n~ag~ 86 (405)
T 4ina_A 82 NIALP 86 (405)
T ss_dssp ECSCG
T ss_pred ECCCc
Confidence 88874
No 400
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=96.44 E-value=0.0024 Score=58.66 Aligned_cols=89 Identities=18% Similarity=0.134 Sum_probs=62.1
Q ss_pred CCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-----CCHH----hhc--CcCCEEEEcCCC
Q 021995 116 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLD----TML--PKCDIVVVNTPL 183 (304)
Q Consensus 116 ~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~----ell--~~aDvVi~~~p~ 183 (304)
.|++|.|+|. |.+|..+++.++.+|++|++.+++....+.++++|.... .++. ++. ...|+++.+..
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g- 244 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTG- 244 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEESSC-
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC-
Confidence 5889999999 999999999999999999999987655555556664321 1121 222 25788877775
Q ss_pred ChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 184 TEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
.+ .-...++.|+++..+|.++.
T Consensus 245 ~~-----~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 245 AL-----YFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp SS-----SHHHHHHHEEEEEEEEESSC
T ss_pred HH-----HHHHHHHhhccCCEEEEEec
Confidence 21 12456677777778877763
No 401
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.44 E-value=0.0039 Score=59.81 Aligned_cols=108 Identities=17% Similarity=0.252 Sum_probs=67.3
Q ss_pred CEEEEEeeChhhHHHHHHhccC-CCeEE-EEcCCCCChhHHH-hc-C----------------------ceecCCHHhhc
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQLEK-ET-G----------------------AKFEEDLDTML 171 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~-G~~V~-~~dr~~~~~~~~~-~~-g----------------------~~~~~~l~ell 171 (304)
.+|||||+|.||+.+++.+... +++|. ++|++....+.+. +. | ...++++++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeLL 103 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLIL 103 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHHh
Confidence 4899999999999999888754 77754 7788764333322 22 3 34567899999
Q ss_pred C--cCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCc-hhchHHHHHHHHcCCce
Q 021995 172 P--KCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGA-IMDTQAVVDACSSGHIA 229 (304)
Q Consensus 172 ~--~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~-~vd~~aL~~aL~~g~i~ 229 (304)
+ +.|+|+.++|... . +. +-.++.|+.|.-++...-+- +..-+.|.++-++..+.
T Consensus 104 ~d~dIDaVviaTp~p~-~-H~--e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvv 160 (446)
T 3upl_A 104 SNPLIDVIIDATGIPE-V-GA--ETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVI 160 (446)
T ss_dssp TCTTCCEEEECSCCHH-H-HH--HHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCCCCEEEEcCCChH-H-HH--HHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCe
Confidence 7 4899999998532 1 11 23445566666666432211 12335566665555444
No 402
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=96.44 E-value=0.0031 Score=58.39 Aligned_cols=66 Identities=21% Similarity=0.277 Sum_probs=43.7
Q ss_pred EEEEEeeChhhHHHHHHhcc-CCCeEEEE-cCCCCChh-HHHhc------------------CceecCCHHhhcCcCCEE
Q 021995 119 TVGTVGCGRIGKLLLQRLKP-FNCNLLYH-DRVKMDPQ-LEKET------------------GAKFEEDLDTMLPKCDIV 177 (304)
Q Consensus 119 ~vgIIG~G~IG~~lA~~l~~-~G~~V~~~-dr~~~~~~-~~~~~------------------g~~~~~~l~ell~~aDvV 177 (304)
+|||+|+|.||+.+++.|.. -++++.+. ++++.... .+... +.....+.++++.++|+|
T Consensus 3 kVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDvV 82 (337)
T 1cf2_P 3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADIV 82 (337)
T ss_dssp EEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSEE
T ss_pred EEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCEE
Confidence 79999999999999999875 47787644 55432111 11111 111112466777899999
Q ss_pred EEcCCCC
Q 021995 178 VVNTPLT 184 (304)
Q Consensus 178 i~~~p~~ 184 (304)
+.|+|..
T Consensus 83 ~~atp~~ 89 (337)
T 1cf2_P 83 IDCTPEG 89 (337)
T ss_dssp EECCSTT
T ss_pred EECCCch
Confidence 9999865
No 403
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.43 E-value=0.0024 Score=59.88 Aligned_cols=95 Identities=16% Similarity=0.154 Sum_probs=67.2
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhHHHhcCceecC----C-HHh----hc--CcCCEEEEcCCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFEE----D-LDT----ML--PKCDIVVVNTPL 183 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~----~-l~e----ll--~~aDvVi~~~p~ 183 (304)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++.+.+.++++|+.... + +.+ +. ...|+|+-++..
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~ 264 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGF 264 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECCCT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCCEEEECCCC
Confidence 58899999999999999999999999 689999877666777888864321 1 222 22 257999988864
Q ss_pred Chhh-----hc-----cccHHHHhcCCCCCEEEEcCC
Q 021995 184 TEKT-----RG-----MFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 184 ~~~t-----~~-----~i~~~~l~~mk~g~ilVn~~r 210 (304)
.... .+ -.-.+.++.++++..++.++-
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 265 EARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp TCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred cccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 3100 00 012467788888888888763
No 404
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=96.42 E-value=0.0012 Score=60.86 Aligned_cols=90 Identities=19% Similarity=0.177 Sum_probs=63.7
Q ss_pred CCCEEEEEeeC-hhhHHHHHHhccC-CCeEEEEcCCCCChhHHHhcCceec-----CC----HHhhc--CcCCEEEEcCC
Q 021995 116 EGKTVGTVGCG-RIGKLLLQRLKPF-NCNLLYHDRVKMDPQLEKETGAKFE-----ED----LDTML--PKCDIVVVNTP 182 (304)
Q Consensus 116 ~g~~vgIIG~G-~IG~~lA~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~~-----~~----l~ell--~~aDvVi~~~p 182 (304)
.|++|.|+|.| .||..+++.++.. |++|++.++++...+.++++|.... .+ +.++. ...|+++.+..
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 249 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNN 249 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCC
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEEEECCC
Confidence 57899999999 9999999999998 9999999987655555666665321 12 22333 35788887776
Q ss_pred CChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 183 LTEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 183 ~~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
..+.. ...++.++++..+|.++.
T Consensus 250 ~~~~~-----~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 250 SEKTL-----SVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp CHHHH-----TTGGGGEEEEEEEEECCS
T ss_pred CHHHH-----HHHHHHHhcCCEEEEECC
Confidence 32121 345667788888888764
No 405
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=96.42 E-value=0.0034 Score=58.65 Aligned_cols=66 Identities=23% Similarity=0.341 Sum_probs=47.0
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhH--HHhcCceec---CCHHhhcCcCCEEEE
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQL--EKETGAKFE---EDLDTMLPKCDIVVV 179 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~--~~~~g~~~~---~~l~ell~~aDvVi~ 179 (304)
.+.+++|+|+|.|.+|+.+++.++.+|++|+++|+++..+.. +...-...+ +.+.++++++|+|+.
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCCccee
Confidence 467999999999999999999999999999999986543211 111000011 225567788998865
No 406
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=96.40 E-value=0.004 Score=53.57 Aligned_cols=70 Identities=19% Similarity=0.221 Sum_probs=51.2
Q ss_pred cCCCEEEEEe-eChhhHHHHHHhccCCC--eEEEEcCCCCChhHHHhcCce-------ecCCHHhhcCcCCEEEEcCCCC
Q 021995 115 LEGKTVGTVG-CGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQLEKETGAK-------FEEDLDTMLPKCDIVVVNTPLT 184 (304)
Q Consensus 115 L~g~~vgIIG-~G~IG~~lA~~l~~~G~--~V~~~dr~~~~~~~~~~~g~~-------~~~~l~ell~~aDvVi~~~p~~ 184 (304)
+.++++.|.| .|.||+.+++.|...|+ +|++.+|++...+.....++. ..++++++++..|+|+.+....
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 95 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence 5788999999 69999999999999999 999999876433211111111 1235667888999999887654
No 407
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=96.40 E-value=0.0036 Score=57.61 Aligned_cols=88 Identities=18% Similarity=0.134 Sum_probs=66.0
Q ss_pred CCEEEEE-eeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHhhc------CcCCEEEEcCCCC
Q 021995 117 GKTVGTV-GCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML------PKCDIVVVNTPLT 184 (304)
Q Consensus 117 g~~vgII-G~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell------~~aDvVi~~~p~~ 184 (304)
+++|.|. |.|.+|...++.++.+|++|++.+++..+.+.++++|+... .++.+.+ ...|+++-++...
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~~ 244 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTGP 244 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCCh
Confidence 3577665 89999999999999999999999988777777788886422 2232222 2699999887632
Q ss_pred hhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 185 EKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 185 ~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
. . ...++.++++..+|.++.
T Consensus 245 -~---~--~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 245 -L---A--SAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp -H---H--HHHHHHSCTTCEEEECCC
T ss_pred -h---H--HHHHhhhcCCCEEEEEec
Confidence 1 1 567888999999999973
No 408
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.39 E-value=0.008 Score=55.08 Aligned_cols=95 Identities=19% Similarity=0.196 Sum_probs=60.4
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCC--CChh-HHHh---------cC--ceecCCHHhhcCcCCEEEEc
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVK--MDPQ-LEKE---------TG--AKFEEDLDTMLPKCDIVVVN 180 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~--~~~~-~~~~---------~g--~~~~~~l~ell~~aDvVi~~ 180 (304)
..++|+|||.|.+|..+|..+...|+ +|..+|+++ ...+ .+.+ .. +....+ .+.+++||+|+++
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDvVIia 85 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSD-YADTADSDVVVIT 85 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESC-GGGGTTCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCC-HHHhCCCCEEEEe
Confidence 46799999999999999999988888 999999963 1111 0000 01 122233 4678999999998
Q ss_pred CCC--Chh-hh-ccc--c----HH---HHhcCCCCCEEEEcCCC
Q 021995 181 TPL--TEK-TR-GMF--D----KD---RIAKMKKGVLIVNNARG 211 (304)
Q Consensus 181 ~p~--~~~-t~-~~i--~----~~---~l~~mk~g~ilVn~~rg 211 (304)
... .+. ++ .++ | ++ .+....|++++++++..
T Consensus 86 ag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNP 129 (315)
T 3tl2_A 86 AGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNP 129 (315)
T ss_dssp CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCCh
Confidence 642 220 11 111 1 12 22334689999999854
No 409
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=96.37 E-value=0.003 Score=57.63 Aligned_cols=86 Identities=14% Similarity=0.125 Sum_probs=64.0
Q ss_pred EEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhh----c-----CcCCEEEEcCCCChhhh
Q 021995 119 TVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTM----L-----PKCDIVVVNTPLTEKTR 188 (304)
Q Consensus 119 ~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~el----l-----~~aDvVi~~~p~~~~t~ 188 (304)
+|.|+|. |.+|..+++.++..|++|++.+++..+.+.++++|+...-+..+. + ...|+++-++.. +.
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~-- 229 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGG-KQ-- 229 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCT-HH--
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCcH-HH--
Confidence 7999998 999999999999999999999988777777778876432122111 1 246888887763 21
Q ss_pred ccccHHHHhcCCCCCEEEEcCC
Q 021995 189 GMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn~~r 210 (304)
-.+.++.++++..++.++-
T Consensus 230 ---~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 230 ---LASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp ---HHHHHTTEEEEEEEEECCC
T ss_pred ---HHHHHHhhcCCCEEEEEec
Confidence 2567788888888888863
No 410
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=96.36 E-value=0.0047 Score=59.40 Aligned_cols=114 Identities=18% Similarity=0.190 Sum_probs=70.1
Q ss_pred CCEEEEEeeChh-hHHHHHHhc----cC-CCeEEEEcCCC--CChhH----HH----hcC----ceecCCHHhhcCcCCE
Q 021995 117 GKTVGTVGCGRI-GKLLLQRLK----PF-NCNLLYHDRVK--MDPQL----EK----ETG----AKFEEDLDTMLPKCDI 176 (304)
Q Consensus 117 g~~vgIIG~G~I-G~~lA~~l~----~~-G~~V~~~dr~~--~~~~~----~~----~~g----~~~~~~l~ell~~aDv 176 (304)
..+|+|||.|.. |..++..|. .+ +.+|..||++. ...+. .. ..+ +....++++.+++||+
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD~ 86 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF 86 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCCE
Confidence 358999999998 777655443 34 56799999965 32221 11 111 2334678889999999
Q ss_pred EEEcCCCChh---hh----------------------------cccc--HHHHhcCCCCCEEEEcCCCchhchHHHHHHH
Q 021995 177 VVVNTPLTEK---TR----------------------------GMFD--KDRIAKMKKGVLIVNNARGAIMDTQAVVDAC 223 (304)
Q Consensus 177 Vi~~~p~~~~---t~----------------------------~~i~--~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL 223 (304)
|+++.|.... ++ .++. .+.+....|++++||++..--+-+.++.+..
T Consensus 87 VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT~a~~k~~ 166 (450)
T 1s6y_A 87 VTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYT 166 (450)
T ss_dssp EEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHC
T ss_pred EEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhC
Confidence 9999985321 00 0110 1223344689999999987656556655544
Q ss_pred HcCCceE
Q 021995 224 SSGHIAG 230 (304)
Q Consensus 224 ~~g~i~g 230 (304)
...++.|
T Consensus 167 p~~rViG 173 (450)
T 1s6y_A 167 KQEKVVG 173 (450)
T ss_dssp CCCCEEE
T ss_pred CCCCEEE
Confidence 3334444
No 411
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.36 E-value=0.0026 Score=57.27 Aligned_cols=38 Identities=26% Similarity=0.389 Sum_probs=35.3
Q ss_pred cccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCC
Q 021995 113 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVK 150 (304)
Q Consensus 113 ~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~ 150 (304)
.++.|++|.|||.|.+|...++.|...|++|+++++..
T Consensus 9 ~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 9 HQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp ECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred EEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 47899999999999999999999999999999999754
No 412
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.35 E-value=0.009 Score=53.99 Aligned_cols=107 Identities=10% Similarity=0.147 Sum_probs=76.1
Q ss_pred cCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCCh---------
Q 021995 115 LEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE--------- 185 (304)
Q Consensus 115 L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~--------- 185 (304)
+.|++|.++|........++.|...|++|....-... .....|....+++.+.++++|+|+...|...
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~---~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~ 81 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQL---DHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVF 81 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTS---SCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSS
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEecccc---ccccccceeccchHHHHhcCCEEEeccccccCCccccccc
Confidence 6788999999999999999999999999987743211 1112244445567788889999987444321
Q ss_pred -hhhccccHHHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 186 -KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 186 -~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
.+...++++.++.++++.+++ ++ +|..++.+++.+.++.
T Consensus 82 a~~~~~~~~~~l~~~~~l~~i~-~g----~~~~d~~~~~~~~gi~ 121 (300)
T 2rir_A 82 SNEEVVLKQDHLDRTPAHCVIF-SG----ISNAYLENIAAQAKRK 121 (300)
T ss_dssp CSSCEECCHHHHHTSCTTCEEE-ES----SCCHHHHHHHHHTTCC
T ss_pred ccCCccchHHHHhhcCCCCEEE-Ee----cCCHHHHHHHHHCCCE
Confidence 122336788999999988877 33 3778877777777776
No 413
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=96.35 E-value=0.015 Score=56.22 Aligned_cols=91 Identities=19% Similarity=0.182 Sum_probs=65.2
Q ss_pred ccCCCEEEEEeeC----------hhhHHHHHHhccCCCeEEEEcCCCCChhHHHhc------------CceecCCHHhhc
Q 021995 114 DLEGKTVGTVGCG----------RIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET------------GAKFEEDLDTML 171 (304)
Q Consensus 114 ~L~g~~vgIIG~G----------~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~------------g~~~~~~l~ell 171 (304)
.+.|++|+|+|+- .-...+++.|...|++|.+|||.. ..+....+ .+....++++.+
T Consensus 325 ~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (478)
T 2y0c_A 325 DLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVA-QEEARRVIALDLADHPSWLERLSFVDDEAQAA 403 (478)
T ss_dssp CCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTTT-HHHHHHHHHHHTTTCHHHHTTEEECSSHHHHT
T ss_pred cCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCCc-cHHHHHhhccccccccccccceeecCCHHHHH
Confidence 5889999999973 356789999999999999999863 12211222 245667889999
Q ss_pred CcCCEEEEcCCCChhhhccccHHHH-hcCCCCCEEEEc
Q 021995 172 PKCDIVVVNTPLTEKTRGMFDKDRI-AKMKKGVLIVNN 208 (304)
Q Consensus 172 ~~aDvVi~~~p~~~~t~~~i~~~~l-~~mk~g~ilVn~ 208 (304)
+++|+|++++... +.+ -++-+.+ +.|+ ..+++|+
T Consensus 404 ~~ad~~vi~t~~~-~f~-~~~~~~~~~~~~-~~~i~D~ 438 (478)
T 2y0c_A 404 RDADALVIVTEWK-IFK-SPDFVALGRLWK-TPVIFDG 438 (478)
T ss_dssp TTCSEEEECSCCG-GGG-SCCHHHHHTTCS-SCEEEES
T ss_pred hCCCEEEEecCCh-Hhh-ccCHHHHHhhcC-CCEEEEC
Confidence 9999999999864 222 3344444 4555 4788887
No 414
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.35 E-value=0.0018 Score=59.00 Aligned_cols=89 Identities=18% Similarity=0.140 Sum_probs=62.2
Q ss_pred CCCEEEEEe-eChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-----CCHH----hhc--CcCCEEEEcCCC
Q 021995 116 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLD----TML--PKCDIVVVNTPL 183 (304)
Q Consensus 116 ~g~~vgIIG-~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~----ell--~~aDvVi~~~p~ 183 (304)
.|++|.|+| .|.||..+++.++..|++|++.+++....+.++++|.... .+.. +.. ...|+++.+..
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g- 218 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVG- 218 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSC-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCc-
Confidence 588999999 7999999999999999999999987554555555564321 1221 111 24788887775
Q ss_pred ChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 184 TEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
. .+ -...++.|+++..+|.++.
T Consensus 219 ~-~~----~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 219 R-DT----WERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp G-GG----HHHHHHTEEEEEEEEECCC
T ss_pred h-HH----HHHHHHHhcCCCEEEEEec
Confidence 2 11 2566777888888888763
No 415
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=96.35 E-value=0.0068 Score=55.73 Aligned_cols=66 Identities=24% Similarity=0.364 Sum_probs=47.1
Q ss_pred CCEEEEEe-eChhhHHHHHHhccCC--CeEEEEcCCCCChhHHHhc---C----cee---cCCHHhhcCcCCEEEEcCCC
Q 021995 117 GKTVGTVG-CGRIGKLLLQRLKPFN--CNLLYHDRVKMDPQLEKET---G----AKF---EEDLDTMLPKCDIVVVNTPL 183 (304)
Q Consensus 117 g~~vgIIG-~G~IG~~lA~~l~~~G--~~V~~~dr~~~~~~~~~~~---g----~~~---~~~l~ell~~aDvVi~~~p~ 183 (304)
.++|+|+| .|.+|..++..|...| .+|..+|+++. .....++ . +.. ..++++.++++|+|+++.+.
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~ 86 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGV 86 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCc
Confidence 35899999 8999999999998777 78999997553 1111111 1 111 22567889999999999753
No 416
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.34 E-value=0.0032 Score=55.74 Aligned_cols=93 Identities=18% Similarity=0.212 Sum_probs=60.7
Q ss_pred cccCCCEEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCC-------------------hhHHH----hc--Cc--eec
Q 021995 113 YDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMD-------------------PQLEK----ET--GA--KFE 164 (304)
Q Consensus 113 ~~L~g~~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~-------------------~~~~~----~~--g~--~~~ 164 (304)
..|.+++|.|+|+|.+|..+++.|...|. ++.++|..... .+.+. +. ++ ...
T Consensus 24 ~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 103 (251)
T 1zud_1 24 QKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL 103 (251)
T ss_dssp HHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 36899999999999999999999999997 57888764311 11111 11 11 111
Q ss_pred ------CCHHhhcCcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcC
Q 021995 165 ------EDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 165 ------~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~ 209 (304)
++++++++++|+|+.++. +.+++..+++...+. +.-+|+.+
T Consensus 104 ~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~l~~~~~~~---~~p~i~~~ 150 (251)
T 1zud_1 104 QQRLTGEALKDAVARADVVLDCTD-NMATRQEINAACVAL---NTPLITAS 150 (251)
T ss_dssp CSCCCHHHHHHHHHHCSEEEECCS-SHHHHHHHHHHHHHT---TCCEEEEE
T ss_pred eccCCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHHh---CCCEEEEe
Confidence 134567888999988876 556777776655542 33355543
No 417
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=96.34 E-value=0.0022 Score=58.40 Aligned_cols=86 Identities=16% Similarity=0.142 Sum_probs=61.2
Q ss_pred EEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec---CCH-Hhhc-----CcCCEEEEcCCCChhhh
Q 021995 119 TVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE---EDL-DTML-----PKCDIVVVNTPLTEKTR 188 (304)
Q Consensus 119 ~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~---~~l-~ell-----~~aDvVi~~~p~~~~t~ 188 (304)
+|.|+|. |.+|..+++.++..|++|++.+++..+.+.++++|+... .+. .+.+ ...|+++-++.. +.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~-~~-- 228 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG-RT-- 228 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTT-TT--
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcH-HH--
Confidence 7999998 999999999999999999999988777777777776421 111 1111 246888777753 11
Q ss_pred ccccHHHHhcCCCCCEEEEcCC
Q 021995 189 GMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn~~r 210 (304)
-.+.++.++++..++.++.
T Consensus 229 ---~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 229 ---LATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp ---HHHHHHTEEEEEEEEECSC
T ss_pred ---HHHHHHhhccCCEEEEEee
Confidence 2466777888888887763
No 418
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=96.33 E-value=0.0013 Score=63.04 Aligned_cols=89 Identities=19% Similarity=0.162 Sum_probs=66.4
Q ss_pred CCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec---C-----------------------CHH
Q 021995 116 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE---E-----------------------DLD 168 (304)
Q Consensus 116 ~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~---~-----------------------~l~ 168 (304)
.|++|.|+|. |.+|...++.++.+|++|++.++++.+.+.++++|+..+ . .+.
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~ 307 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIR 307 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHH
Confidence 6889999998 999999999999999999988877666677778886422 0 111
Q ss_pred hhc--CcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 169 TML--PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 169 ell--~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
++. ...|+|+-++.. +. -...+..++++..+|.++-
T Consensus 308 ~~t~g~g~Dvvid~~G~-~~-----~~~~~~~l~~~G~iv~~G~ 345 (456)
T 3krt_A 308 ELTGGEDIDIVFEHPGR-ET-----FGASVFVTRKGGTITTCAS 345 (456)
T ss_dssp HHHTSCCEEEEEECSCH-HH-----HHHHHHHEEEEEEEEESCC
T ss_pred HHhCCCCCcEEEEcCCc-hh-----HHHHHHHhhCCcEEEEEec
Confidence 222 368999988763 21 2466778888888888863
No 419
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.32 E-value=0.0077 Score=47.47 Aligned_cols=99 Identities=17% Similarity=0.204 Sum_probs=70.4
Q ss_pred CEEEEEee----ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccH
Q 021995 118 KTVGTVGC----GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDK 193 (304)
Q Consensus 118 ~~vgIIG~----G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~ 193 (304)
++|+|||. |..|..+.+.|+..|++|+.+++... + -.|...+.++.++-. -|++++++|. +.+..++ +
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~--~---i~G~~~y~sl~dlp~-vDlavi~~p~-~~v~~~v-~ 76 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKG--E---VLGKTIINERPVIEG-VDTVTLYINP-QNQLSEY-N 76 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCS--E---ETTEECBCSCCCCTT-CCEEEECSCH-HHHGGGH-H
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCC--c---CCCeeccCChHHCCC-CCEEEEEeCH-HHHHHHH-H
Confidence 58999997 67899999999999999999998542 1 235666778888777 9999999994 3334444 3
Q ss_pred HHHhcCCCCCEEEEcCCCchhchHHHHHHHHcCCce
Q 021995 194 DRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIA 229 (304)
Q Consensus 194 ~~l~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~i~ 229 (304)
+..+ +...+++++.+ . .++++.+..++..+.
T Consensus 77 e~~~-~g~k~v~~~~G--~--~~~e~~~~a~~~Gir 107 (122)
T 3ff4_A 77 YILS-LKPKRVIFNPG--T--ENEELEEILSENGIE 107 (122)
T ss_dssp HHHH-HCCSEEEECTT--C--CCHHHHHHHHHTTCE
T ss_pred HHHh-cCCCEEEECCC--C--ChHHHHHHHHHcCCe
Confidence 3332 34345666544 2 467788888887776
No 420
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.31 E-value=0.0053 Score=57.11 Aligned_cols=88 Identities=22% Similarity=0.228 Sum_probs=53.0
Q ss_pred CEEEEEe-eChhhHHHHHHhccC-CCeEEEEc--CCCCChhHHHhcC-------------cee-cCCHHhhcC-cCCEEE
Q 021995 118 KTVGTVG-CGRIGKLLLQRLKPF-NCNLLYHD--RVKMDPQLEKETG-------------AKF-EEDLDTMLP-KCDIVV 178 (304)
Q Consensus 118 ~~vgIIG-~G~IG~~lA~~l~~~-G~~V~~~d--r~~~~~~~~~~~g-------------~~~-~~~l~ell~-~aDvVi 178 (304)
.+|+|+| +|.+|+.+++.|... +++|.++. +..........++ ... ..+++++++ ++|+|+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~ 88 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIVF 88 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCEEE
Confidence 4899999 999999999999765 46777664 2221111111111 111 114556556 899999
Q ss_pred EcCCCChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 179 VNTPLTEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 179 ~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
+|+|..... .. -.. .++.|..+|+.+-
T Consensus 89 ~atp~~~~~-~~-a~~---~~~aG~~VId~s~ 115 (354)
T 1ys4_A 89 SALPSDLAK-KF-EPE---FAKEGKLIFSNAS 115 (354)
T ss_dssp ECCCHHHHH-HH-HHH---HHHTTCEEEECCS
T ss_pred ECCCchHHH-HH-HHH---HHHCCCEEEECCc
Confidence 999843221 11 112 2356888999874
No 421
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=96.30 E-value=0.0082 Score=55.84 Aligned_cols=89 Identities=15% Similarity=0.024 Sum_probs=64.1
Q ss_pred cCCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-----CCHHhhc-----CcCCEEEEcCCC
Q 021995 115 LEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLDTML-----PKCDIVVVNTPL 183 (304)
Q Consensus 115 L~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell-----~~aDvVi~~~p~ 183 (304)
-.|++|.|+|. |.+|...++.++.+|++|++.. ++.+.+.++++|+..+ .++.+.+ ...|+++-++..
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~ 241 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITN 241 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCS
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCc
Confidence 47899999999 8999999999999999988775 4566777788886421 2222221 238999888764
Q ss_pred ChhhhccccHHHHhcC-CCCCEEEEcC
Q 021995 184 TEKTRGMFDKDRIAKM-KKGVLIVNNA 209 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~m-k~g~ilVn~~ 209 (304)
... -...++.+ +++..+|.++
T Consensus 242 ~~~-----~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 242 VES-----TTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp HHH-----HHHHHHHSCTTCEEEEESS
T ss_pred hHH-----HHHHHHHhhcCCCEEEEEe
Confidence 221 14556677 6888888886
No 422
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.29 E-value=0.0058 Score=55.95 Aligned_cols=91 Identities=18% Similarity=0.122 Sum_probs=66.4
Q ss_pred cCCCEEEEEeeChhhHHHHHHhccCCCeE-EEEcCCCCChhHHHhcCceec-----CCHHhh------cCcCCEEEEcCC
Q 021995 115 LEGKTVGTVGCGRIGKLLLQRLKPFNCNL-LYHDRVKMDPQLEKETGAKFE-----EDLDTM------LPKCDIVVVNTP 182 (304)
Q Consensus 115 L~g~~vgIIG~G~IG~~lA~~l~~~G~~V-~~~dr~~~~~~~~~~~g~~~~-----~~l~el------l~~aDvVi~~~p 182 (304)
..|++|.|+|.|.+|...++.++.+|+++ ++.++++.+.+.++++|+... .+..+. ....|+++-++.
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~~G 238 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAG 238 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEEECSC
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCccccccccc
Confidence 36889999999999999999999999874 677887766777888886422 222222 234788887775
Q ss_pred CChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 183 LTEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 183 ~~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
.... -...++.++++..++.++-
T Consensus 239 ~~~~-----~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 239 VPQT-----VELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp SHHH-----HHHHHHHCCTTCEEEECCC
T ss_pred ccch-----hhhhhheecCCeEEEEEec
Confidence 3221 1466788999999988874
No 423
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.28 E-value=0.0037 Score=56.15 Aligned_cols=91 Identities=20% Similarity=0.284 Sum_probs=58.3
Q ss_pred CCEEEEEe-eChhhHHHHHHhc-cCCCeEEE-EcCCCCChh-----HHH--hcCceecCCHHhhcCcCCEEEEcCCCChh
Q 021995 117 GKTVGTVG-CGRIGKLLLQRLK-PFNCNLLY-HDRVKMDPQ-----LEK--ETGAKFEEDLDTMLPKCDIVVVNTPLTEK 186 (304)
Q Consensus 117 g~~vgIIG-~G~IG~~lA~~l~-~~G~~V~~-~dr~~~~~~-----~~~--~~g~~~~~~l~ell~~aDvVi~~~p~~~~ 186 (304)
-.+|+|+| +|.||+.+++.+. .-++++++ +|++..... ... ..++....++++++.++|+|+-+.+.. .
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~p~-a 85 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTLPE-G 85 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSCHH-H
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCCHH-H
Confidence 35899999 8999999999886 45888665 687642110 000 114555679999999999999887522 1
Q ss_pred hhccccHHHHhcCCCCCEEEEcCCCc
Q 021995 187 TRGMFDKDRIAKMKKGVLIVNNARGA 212 (304)
Q Consensus 187 t~~~i~~~~l~~mk~g~ilVn~~rg~ 212 (304)
+. ......++.|.-+|-...|-
T Consensus 86 ~~----~~~~~al~~G~~vVigTTG~ 107 (272)
T 4f3y_A 86 TL----VHLDAALRHDVKLVIGTTGF 107 (272)
T ss_dssp HH----HHHHHHHHHTCEEEECCCCC
T ss_pred HH----HHHHHHHHcCCCEEEECCCC
Confidence 11 12222345566666666663
No 424
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=96.27 E-value=0.0047 Score=56.36 Aligned_cols=90 Identities=20% Similarity=0.240 Sum_probs=57.6
Q ss_pred EEEEEeeChhhHHHHHHhccCCC-eEEEEcCCCCChhH-HHh-------c--C--ceecCCHHhhcCcCCEEEEcCCCCh
Q 021995 119 TVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQL-EKE-------T--G--AKFEEDLDTMLPKCDIVVVNTPLTE 185 (304)
Q Consensus 119 ~vgIIG~G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~-~~~-------~--g--~~~~~~l~ell~~aDvVi~~~p~~~ 185 (304)
+|+|||.|.+|..++..+...|+ +|..+|.+....+. +.+ . . +....+. +.+++||+|+++.+...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~~ 79 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIGR 79 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCCC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCCC
Confidence 58999999999999998876566 69999987543321 111 1 2 2222455 67899999999965432
Q ss_pred h-----------hhccccHHH---HhcCCCCCEEEEcCC
Q 021995 186 K-----------TRGMFDKDR---IAKMKKGVLIVNNAR 210 (304)
Q Consensus 186 ~-----------t~~~i~~~~---l~~mk~g~ilVn~~r 210 (304)
. +..++ .+. +....|++++|+++.
T Consensus 80 k~G~~r~dl~~~n~~i~-~~i~~~i~~~~p~a~iiv~tN 117 (308)
T 2d4a_B 80 KPGMTREQLLEANANTM-ADLAEKIKAYAKDAIVVITTN 117 (308)
T ss_dssp CSSCCTHHHHHHHHHHH-HHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCcHHHHHHHHHHHH-HHHHHHHHHHCCCeEEEEeCC
Confidence 1 11111 122 222358999999865
No 425
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=96.27 E-value=0.0021 Score=59.19 Aligned_cols=89 Identities=16% Similarity=0.102 Sum_probs=64.0
Q ss_pred CCCEEEEEe-eChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec---CCHHhhc------CcCCEEEEcCCCCh
Q 021995 116 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE---EDLDTML------PKCDIVVVNTPLTE 185 (304)
Q Consensus 116 ~g~~vgIIG-~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~---~~l~ell------~~aDvVi~~~p~~~ 185 (304)
.|++|.|+| .|.+|..+++.++..|++|++. ++....+.++++|+... .++.+.+ ...|+++-++.. +
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~i~~~~~~~~~~~~~~~~~g~D~vid~~g~-~ 227 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTLGG-P 227 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEEEETTSCHHHHHHHHHTTSCEEEEEESSCT-H
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCEeccCCCHHHHHHHHhcCCCceEEEECCCc-H
Confidence 688999999 7999999999999999999988 55555666677776432 1222221 258888887762 2
Q ss_pred hhhccccHHHHhcCCCCCEEEEcCCC
Q 021995 186 KTRGMFDKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 186 ~t~~~i~~~~l~~mk~g~ilVn~~rg 211 (304)
. -...+..|+++..+|.++-.
T Consensus 228 ~-----~~~~~~~l~~~G~iv~~g~~ 248 (343)
T 3gaz_A 228 V-----LDASFSAVKRFGHVVSCLGW 248 (343)
T ss_dssp H-----HHHHHHHEEEEEEEEESCCC
T ss_pred H-----HHHHHHHHhcCCeEEEEccc
Confidence 1 24667778888888887643
No 426
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=96.26 E-value=0.0029 Score=55.77 Aligned_cols=94 Identities=16% Similarity=0.218 Sum_probs=55.8
Q ss_pred EEEEEee-ChhhHHHHHHhccC--CCeEEEEcCCCCChhHHHhcCcee-------cCCHHhhcCcCCEEEEcCCCChhhh
Q 021995 119 TVGTVGC-GRIGKLLLQRLKPF--NCNLLYHDRVKMDPQLEKETGAKF-------EEDLDTMLPKCDIVVVNTPLTEKTR 188 (304)
Q Consensus 119 ~vgIIG~-G~IG~~lA~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~-------~~~l~ell~~aDvVi~~~p~~~~t~ 188 (304)
+|.|.|. |.||+.+++.|... |++|++.+|++.+.......++.. .++++++++++|+|+.+........
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~ 80 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQR 80 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-------
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchHH
Confidence 4788886 99999999999988 999999998765433322223321 1345678899999987765321110
Q ss_pred ccccHHHHhcCCC-C-CEEEEcCCCc
Q 021995 189 GMFDKDRIAKMKK-G-VLIVNNARGA 212 (304)
Q Consensus 189 ~~i~~~~l~~mk~-g-~ilVn~~rg~ 212 (304)
-......++.+++ + ..||.+|...
T Consensus 81 ~~~~~~l~~a~~~~~~~~~v~~Ss~~ 106 (286)
T 2zcu_A 81 APQHRNVINAAKAAGVKFIAYTSLLH 106 (286)
T ss_dssp -CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCC
Confidence 0111223333321 2 4677777644
No 427
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=96.25 E-value=0.0051 Score=55.46 Aligned_cols=70 Identities=13% Similarity=0.065 Sum_probs=49.3
Q ss_pred ccCCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHh-------cCce--------ecCCHHhhcCcCCEE
Q 021995 114 DLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-------TGAK--------FEEDLDTMLPKCDIV 177 (304)
Q Consensus 114 ~L~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~-------~g~~--------~~~~l~ell~~aDvV 177 (304)
.+.|++|.|.|. |.||+.+++.|...|++|++.+|+....+.... .++. ..++++++++++|+|
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 468899999997 999999999999999999999986432211110 1121 123455677789999
Q ss_pred EEcCCC
Q 021995 178 VVNTPL 183 (304)
Q Consensus 178 i~~~p~ 183 (304)
+.+...
T Consensus 88 ih~A~~ 93 (342)
T 1y1p_A 88 AHIASV 93 (342)
T ss_dssp EECCCC
T ss_pred EEeCCC
Confidence 877643
No 428
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=96.24 E-value=0.0067 Score=56.04 Aligned_cols=89 Identities=17% Similarity=0.087 Sum_probs=63.5
Q ss_pred CC-CEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCC----hhHHHhcCceecC--------CHH----hhc----Cc
Q 021995 116 EG-KTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMD----PQLEKETGAKFEE--------DLD----TML----PK 173 (304)
Q Consensus 116 ~g-~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~----~~~~~~~g~~~~~--------~l~----ell----~~ 173 (304)
.| .+|.|+|. |.+|...++.++.+|++|++..++..+ .+.++++|+..+- ++. ++. ..
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g 245 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE 245 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCC
Confidence 57 89999998 999999999999999998888765544 3455677764321 111 111 35
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 174 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 174 aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
.|+++-++... . . .+.++.++++..+|.++-
T Consensus 246 ~Dvvid~~G~~-~---~--~~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 246 AKLALNCVGGK-S---S--TGIARKLNNNGLMLTYGG 276 (364)
T ss_dssp EEEEEESSCHH-H---H--HHHHHTSCTTCEEEECCC
T ss_pred ceEEEECCCch-h---H--HHHHHHhccCCEEEEecC
Confidence 89999888632 1 1 256788999999998873
No 429
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=96.23 E-value=0.0025 Score=58.91 Aligned_cols=89 Identities=12% Similarity=0.045 Sum_probs=61.7
Q ss_pred CCCEEEEEe-eChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-----CCHH----hhc--CcCCEEEEcCCC
Q 021995 116 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLD----TML--PKCDIVVVNTPL 183 (304)
Q Consensus 116 ~g~~vgIIG-~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~----ell--~~aDvVi~~~p~ 183 (304)
.|++|.|+| .|.+|..+++.++..|++|++.+++....+.++++|.... .+.. +.. ...|+++.+...
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~ 241 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGG 241 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCG
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCc
Confidence 588999999 7999999999999999999999987655555556664321 1111 122 247888777753
Q ss_pred ChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 184 TEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
. . -...++.|+++..+|.++.
T Consensus 242 ~-----~-~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 242 S-----Y-WEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp G-----G-HHHHHHHEEEEEEEEECCC
T ss_pred h-----H-HHHHHHhccCCCEEEEEec
Confidence 1 1 2455677788888887763
No 430
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=96.21 E-value=0.0025 Score=57.94 Aligned_cols=87 Identities=15% Similarity=0.087 Sum_probs=64.7
Q ss_pred CCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHh------hc-CcCCEEEEcCCCChhhh
Q 021995 117 GKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDT------ML-PKCDIVVVNTPLTEKTR 188 (304)
Q Consensus 117 g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~e------ll-~~aDvVi~~~p~~~~t~ 188 (304)
|+ |.|+|. |.+|...++.++.+|++|++.++++.+.+.++++|+...-+..+ +. ...|+++-++.. +
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g~-~--- 222 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGD-K--- 222 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSCH-H---
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCCc-H---
Confidence 45 999998 99999999999999999999998887778888888643212111 11 246888777652 1
Q ss_pred ccccHHHHhcCCCCCEEEEcCC
Q 021995 189 GMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 189 ~~i~~~~l~~mk~g~ilVn~~r 210 (304)
.-...++.++++..+|.++.
T Consensus 223 --~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 223 --VLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp --HHHHHHHTEEEEEEEEECCC
T ss_pred --HHHHHHHHHhcCCEEEEEec
Confidence 22567788899999998874
No 431
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.21 E-value=0.012 Score=56.94 Aligned_cols=92 Identities=14% Similarity=0.248 Sum_probs=66.3
Q ss_pred cccCCCEEEEEeeC----------hhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCC
Q 021995 113 YDLEGKTVGTVGCG----------RIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 113 ~~L~g~~vgIIG~G----------~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p 182 (304)
..+.|++|+|+|+- .-...+++.|...|++|.+|||.-.. .. ......++++.++++|+|++++.
T Consensus 349 ~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~---~~--~~~~~~~~~~~~~~ad~vvi~t~ 423 (478)
T 3g79_A 349 KKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVN---YP--GVEISDNLEEVVRNADAIVVLAG 423 (478)
T ss_dssp CCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCC---BT--TBCEESCHHHHHTTCSEEEECSC
T ss_pred cCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCccc---cc--CcceecCHHHHHhcCCEEEEecC
Confidence 36789999999973 33688999999999999999986531 11 12345689999999999999987
Q ss_pred CChhhhccccHH-HHhcCC-CCCEEEEcCCCc
Q 021995 183 LTEKTRGMFDKD-RIAKMK-KGVLIVNNARGA 212 (304)
Q Consensus 183 ~~~~t~~~i~~~-~l~~mk-~g~ilVn~~rg~ 212 (304)
.. +.+. ++-+ ..+.|+ +..+++|+ |+-
T Consensus 424 ~~-~f~~-~d~~~~~~~~~~~~~~i~D~-rn~ 452 (478)
T 3g79_A 424 HS-AYSS-LKADWAKKVSAKANPVIIDG-RNV 452 (478)
T ss_dssp CH-HHHS-CCHHHHHHHHCCSSCEEEES-SSC
T ss_pred CH-HHHh-hhHHHHHHHhccCCCEEEEC-CCC
Confidence 54 2222 3444 445677 47889995 553
No 432
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=96.21 E-value=0.0051 Score=55.38 Aligned_cols=40 Identities=10% Similarity=0.058 Sum_probs=35.3
Q ss_pred ccccCCCEEEEEeeC---hhhHHHHHHhccCCCeEEEEcCCCC
Q 021995 112 AYDLEGKTVGTVGCG---RIGKLLLQRLKPFNCNLLYHDRVKM 151 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G---~IG~~lA~~l~~~G~~V~~~dr~~~ 151 (304)
...+.||++.|.|.+ .||+.+|+.|...|++|++.+|+..
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~ 67 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSET 67 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChH
Confidence 346899999999985 8999999999999999999998753
No 433
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=96.20 E-value=0.0087 Score=55.88 Aligned_cols=86 Identities=13% Similarity=0.113 Sum_probs=64.1
Q ss_pred CEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhhhccccHHHHh
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIA 197 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t~~~i~~~~l~ 197 (304)
.++.|+|.|.+|+.+++.++.+|++|+++|+.+. .+ + .+-++.+|-++...| .+.+.
T Consensus 200 ~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~---~~---------~-~~~fp~a~~v~~~~p----------~~~~~ 256 (362)
T 3on5_A 200 ERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPN---QC---------E-KHFFPDADEIIVDFP----------ADFLR 256 (362)
T ss_dssp EEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGG---GG---------C-GGGCTTCSEEEESCH----------HHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEECCCcc---cc---------c-cccCCCceEEecCCH----------HHHHh
Confidence 4799999999999999999999999999997531 11 1 123456676655444 23344
Q ss_pred c--CCCCCEEEEcCCCchhchHHHHHHHHcC
Q 021995 198 K--MKKGVLIVNNARGAIMDTQAVVDACSSG 226 (304)
Q Consensus 198 ~--mk~g~ilVn~~rg~~vd~~aL~~aL~~g 226 (304)
. +.+++.+|=+.++.-.|...|.++|++.
T Consensus 257 ~~~~~~~t~vvv~TH~h~~D~~~L~~aL~~~ 287 (362)
T 3on5_A 257 KFLIRPDDFVLIMTHHFQKDQEILHFLLEKE 287 (362)
T ss_dssp HSCCCTTCEEEECCSCHHHHHHHHHHHSSSC
T ss_pred hcCCCCCeEEEEEeCCchhhHHHHHHHhcCC
Confidence 4 5678888889999999999988888773
No 434
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=96.19 E-value=0.033 Score=53.38 Aligned_cols=110 Identities=16% Similarity=0.161 Sum_probs=64.9
Q ss_pred ccccCCCEEEEEeeChhhHHHHHHhccCCCeEEE-Ec-------CCCC-Chh---HHH---------------hcCceec
Q 021995 112 AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLY-HD-------RVKM-DPQ---LEK---------------ETGAKFE 164 (304)
Q Consensus 112 ~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~-~d-------r~~~-~~~---~~~---------------~~g~~~~ 164 (304)
+.++.|++|.|.|+|++|+.++++|...|.+|++ .| +... ..+ ... +++.+..
T Consensus 225 G~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~i 304 (449)
T 1bgv_A 225 NDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQFF 304 (449)
T ss_dssp TCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEEE
T ss_pred cCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcccccCCEEe
Confidence 4578999999999999999999999999999875 44 3222 111 000 0122222
Q ss_pred CCHHh-hcCcCCEEEEcCCCChhhhccccHHHHhcCC-CCCEEE-EcCCCchhchHHHHHHHHcC-Cce
Q 021995 165 EDLDT-MLPKCDIVVVNTPLTEKTRGMFDKDRIAKMK-KGVLIV-NNARGAIMDTQAVVDACSSG-HIA 229 (304)
Q Consensus 165 ~~l~e-ll~~aDvVi~~~p~~~~t~~~i~~~~l~~mk-~g~ilV-n~~rg~~vd~~aL~~aL~~g-~i~ 229 (304)
+ .++ +-..||+++-|.. .+.|+.+..+.++ +|+.+| -.+.+++ ..++- +.|.+. .+.
T Consensus 305 ~-~~e~~~~~~Dil~P~A~-----~~~I~~~na~~l~a~g~kiV~EgAN~p~-T~eA~-~~l~~~~Gi~ 365 (449)
T 1bgv_A 305 P-GEKPWGQKVDIIMPCAT-----QNDVDLEQAKKIVANNVKYYIEVANMPT-TNEAL-RFLMQQPNMV 365 (449)
T ss_dssp E-TCCGGGSCCSEEECCSC-----TTCBCHHHHHHHHHTTCCEEECCSSSCB-CHHHH-HHHHHCTTCE
T ss_pred C-chhhhcCCcceeecccc-----ccccchhhHHHHHhcCCeEEEeCCCCcC-CHHHH-HHHHHcCCEE
Confidence 1 112 2336888876653 3456666666665 344444 4444553 44443 556665 554
No 435
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=96.19 E-value=0.0042 Score=57.67 Aligned_cols=68 Identities=21% Similarity=0.257 Sum_probs=49.0
Q ss_pred cCCCEEEEEee-ChhhHHHHHHhccCC--CeEEEEcCCCCChhH----HHh-----cCceecCCHHhhcCcCCEEEEcCC
Q 021995 115 LEGKTVGTVGC-GRIGKLLLQRLKPFN--CNLLYHDRVKMDPQL----EKE-----TGAKFEEDLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 115 L~g~~vgIIG~-G~IG~~lA~~l~~~G--~~V~~~dr~~~~~~~----~~~-----~g~~~~~~l~ell~~aDvVi~~~p 182 (304)
+.+++|+|||. |.+|..+|..+..+| .+|..+|....+.+. ... ..+....++.+.+++||+|+++..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 46789999998 999999998887777 479999985422111 111 122334578888999999999863
No 436
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.18 E-value=0.0033 Score=60.64 Aligned_cols=68 Identities=16% Similarity=0.169 Sum_probs=49.7
Q ss_pred CCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHH-hcCceec-------CCHHhh-cCcCCEEEEcCCCC
Q 021995 117 GKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK-ETGAKFE-------EDLDTM-LPKCDIVVVNTPLT 184 (304)
Q Consensus 117 g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~-------~~l~el-l~~aDvVi~~~p~~ 184 (304)
.++|-|+|+|.+|+.+|+.|...|++|++.|.++...+... ++++... +.|+++ +++||+++.+++..
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~D 79 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTD 79 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCCh
Confidence 46899999999999999999999999999998764443332 3444221 123333 68899988777654
No 437
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=96.18 E-value=0.0031 Score=57.61 Aligned_cols=88 Identities=9% Similarity=0.172 Sum_probs=59.8
Q ss_pred CCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-----CCHH----hhc--CcCCEEEEcCCC
Q 021995 116 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLD----TML--PKCDIVVVNTPL 183 (304)
Q Consensus 116 ~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~----ell--~~aDvVi~~~p~ 183 (304)
.|++|.|+|. |.||..+++.++..|++|++.+++....+.++++|.... .+.. +.. ...|+++.+...
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~ 224 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGK 224 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcH
Confidence 5789999995 999999999999999999999987544455555554311 1111 111 246777777653
Q ss_pred ChhhhccccHHHHhcCCCCCEEEEcC
Q 021995 184 TEKTRGMFDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~mk~g~ilVn~~ 209 (304)
+ .-...++.|+++..+|.++
T Consensus 225 -~-----~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 225 -D-----TLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp -T-----THHHHHHTEEEEEEEEECC
T ss_pred -H-----HHHHHHHhhccCCEEEEEe
Confidence 1 1245667777777777775
No 438
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.17 E-value=0.0081 Score=55.73 Aligned_cols=87 Identities=17% Similarity=0.141 Sum_probs=51.5
Q ss_pred CEEEEEeeChhhHHHHHHhccC-CCeEEEE-cCCCCChh-H--------------------HHhcCceecCCHHhhcCcC
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF-NCNLLYH-DRVKMDPQ-L--------------------EKETGAKFEEDLDTMLPKC 174 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~-G~~V~~~-dr~~~~~~-~--------------------~~~~g~~~~~~l~ell~~a 174 (304)
.+|||+|+|.||+.+++.|... +++|+++ |+++.... . ....+.....+.++++.++
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~v 82 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIEDA 82 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGGC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccCC
Confidence 3899999999999999998654 6887655 33211111 0 1111111112345566789
Q ss_pred CEEEEcCCCChhhhccccHHH-HhcCCCCCEEEEcC
Q 021995 175 DIVVVNTPLTEKTRGMFDKDR-IAKMKKGVLIVNNA 209 (304)
Q Consensus 175 DvVi~~~p~~~~t~~~i~~~~-l~~mk~g~ilVn~~ 209 (304)
|+|+.|+|..... +.. -..++.|+.+|..+
T Consensus 83 DiV~eatg~~~s~-----~~a~~~~l~aG~~VI~sa 113 (343)
T 2yyy_A 83 DIVVDGAPKKIGK-----QNLENIYKPHKVKAILQG 113 (343)
T ss_dssp SEEEECCCTTHHH-----HHHHHTTTTTTCEEEECT
T ss_pred CEEEECCCccccH-----HHHHHHHHHCCCEEEECC
Confidence 9999999854321 111 24567777766544
No 439
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=96.14 E-value=0.017 Score=55.22 Aligned_cols=84 Identities=17% Similarity=0.178 Sum_probs=62.3
Q ss_pred ccCCCEEEEEeeC----------hhhHHHHHHhccC-CCeEEEEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCC
Q 021995 114 DLEGKTVGTVGCG----------RIGKLLLQRLKPF-NCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 114 ~L~g~~vgIIG~G----------~IG~~lA~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p 182 (304)
.+.|++|+|+|+- .-...+++.|... |++|.+|||.-... ....++++.++++|+|++++.
T Consensus 312 ~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~--------~~~~~~~~~~~~ad~vvi~t~ 383 (431)
T 3ojo_A 312 ALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD--------FVEHDMSHAVKDASLVLILSD 383 (431)
T ss_dssp HSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT--------TBCSTTHHHHTTCSEEEECSC
T ss_pred hcCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc--------cccCCHHHHHhCCCEEEEecC
Confidence 3689999999973 3468899999998 99999999865321 234678899999999999987
Q ss_pred CChhhhccccHHHHhcCCCCCEEEEc
Q 021995 183 LTEKTRGMFDKDRIAKMKKGVLIVNN 208 (304)
Q Consensus 183 ~~~~t~~~i~~~~l~~mk~g~ilVn~ 208 (304)
..+ .+ -++-+.++.|+ +.+++|.
T Consensus 384 ~~~-f~-~~d~~~~~~~~-~~~i~D~ 406 (431)
T 3ojo_A 384 HSE-FK-NLSDSHFDKMK-HKVIFDT 406 (431)
T ss_dssp CGG-GT-SCCGGGGTTCS-SCEEEES
T ss_pred CHH-Hh-ccCHHHHHhCC-CCEEEEC
Confidence 543 22 23444456676 6788886
No 440
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=96.12 E-value=0.011 Score=54.44 Aligned_cols=98 Identities=12% Similarity=0.186 Sum_probs=61.1
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCC--eEEEEcCCCCChhH-HHhc--C--------ceecCCHHhhcCcCCEEEEc
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNC--NLLYHDRVKMDPQL-EKET--G--------AKFEEDLDTMLPKCDIVVVN 180 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~--~V~~~dr~~~~~~~-~~~~--g--------~~~~~~l~ell~~aDvVi~~ 180 (304)
....++|+|||.|.||..+|..+...|. ++..+|.+....+. +.++ . +....+.+ .+++||+|+++
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~ 94 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIIT 94 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEEC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEc
Confidence 3567899999999999999998876666 89999986422111 1111 1 11234554 58999999998
Q ss_pred CCCC--h-hhh-ccc--cH-------HHHhcCCCCCEEEEcCCCc
Q 021995 181 TPLT--E-KTR-GMF--DK-------DRIAKMKKGVLIVNNARGA 212 (304)
Q Consensus 181 ~p~~--~-~t~-~~i--~~-------~~l~~mk~g~ilVn~~rg~ 212 (304)
.... + .++ .++ |. +.+....|++++++++..-
T Consensus 95 aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 139 (331)
T 4aj2_A 95 AGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPV 139 (331)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChH
Confidence 6422 1 111 111 11 1233347899999998543
No 441
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=96.09 E-value=0.0025 Score=59.00 Aligned_cols=88 Identities=14% Similarity=0.170 Sum_probs=59.2
Q ss_pred CCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceec-----CCHH----hhcC--cCCEEEEcCCC
Q 021995 116 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFE-----EDLD----TMLP--KCDIVVVNTPL 183 (304)
Q Consensus 116 ~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~----ell~--~aDvVi~~~p~ 183 (304)
.|++|.|+|. |.+|..+++.++..|++|++.++++...+.++++|.... .++. +... ..|+++.+...
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~ 249 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLAN 249 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHH
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCCh
Confidence 5889999998 999999999999999999999987655555556654321 1111 1111 46777766542
Q ss_pred ChhhhccccHHHHhcCCCCCEEEEcC
Q 021995 184 TEKTRGMFDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~mk~g~ilVn~~ 209 (304)
+ .+ ...++.++++..+|.++
T Consensus 250 -~----~~-~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 250 -V----NL-SKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp -H----HH-HHHHHHEEEEEEEEECC
T ss_pred -H----HH-HHHHHhccCCCEEEEEe
Confidence 1 11 34566677777777775
No 442
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=96.09 E-value=0.012 Score=54.36 Aligned_cols=88 Identities=13% Similarity=0.182 Sum_probs=61.5
Q ss_pred CCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCC----hhHHHhcCceecC--------CHHhhcC---cCCEEEE
Q 021995 116 EGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMD----PQLEKETGAKFEE--------DLDTMLP---KCDIVVV 179 (304)
Q Consensus 116 ~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~----~~~~~~~g~~~~~--------~l~ell~---~aDvVi~ 179 (304)
.|++|.|+|. |.+|...++.++.+|++|++...+... .+.++++|+..+- .+.++.. ..|+++-
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid 246 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALN 246 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEE
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEEE
Confidence 5889999998 999999999999999987766543322 3456677764321 2223332 3799988
Q ss_pred cCCCChhhhccccHHHHhcCCCCCEEEEcC
Q 021995 180 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 180 ~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~ 209 (304)
++.. +.+ .+.++.++++..+|.++
T Consensus 247 ~~g~-~~~-----~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 247 CVGG-KSS-----TELLRQLARGGTMVTYG 270 (357)
T ss_dssp SSCH-HHH-----HHHHTTSCTTCEEEECC
T ss_pred CCCc-HHH-----HHHHHhhCCCCEEEEEe
Confidence 8762 222 35678899999998885
No 443
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=96.09 E-value=0.0038 Score=55.28 Aligned_cols=67 Identities=16% Similarity=0.167 Sum_probs=46.1
Q ss_pred CCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHH---hcCceecCCHHhhcCc-CCEEEEcCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK---ETGAKFEEDLDTMLPK-CDIVVVNTP 182 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~---~~g~~~~~~l~ell~~-aDvVi~~~p 182 (304)
.+++|.|.|.|.||+.+++.|...|++|++.+|+........ .......++++++++. +|+|+.+..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 467899999999999999999999999999998754321000 0011112334556666 999987653
No 444
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=96.09 E-value=0.005 Score=55.90 Aligned_cols=104 Identities=14% Similarity=0.142 Sum_probs=68.2
Q ss_pred CEEEEEee-ChhhHHHHHHhccCCCe-EEEEcCCCCChhHHHhcCceecCCHHhhcC--cCCEEEEcCCCChhhhccccH
Q 021995 118 KTVGTVGC-GRIGKLLLQRLKPFNCN-LLYHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLTEKTRGMFDK 193 (304)
Q Consensus 118 ~~vgIIG~-G~IG~~lA~~l~~~G~~-V~~~dr~~~~~~~~~~~g~~~~~~l~ell~--~aDvVi~~~p~~~~t~~~i~~ 193 (304)
.++.|+|. |++|+.+++.+...|++ |..+++.....+ -.|+..+.+++++.. ..|++++++|.. .+...+ +
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g~~---i~G~~vy~sl~el~~~~~~Dv~ii~vp~~-~~~~~v-~ 88 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQN---VHGVPVFDTVKEAVKETDANASVIFVPAP-FAKDAV-F 88 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTTCE---ETTEEEESSHHHHHHHHCCCEEEECCCHH-HHHHHH-H
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCCce---ECCEeeeCCHHHHhhcCCCCEEEEccCHH-HHHHHH-H
Confidence 35788898 99999999999988998 335555321111 247777789999988 899999999843 222222 2
Q ss_pred HHHhcCCCCCE-EEEcCCCc-hhchHHHHHHHHcCCce
Q 021995 194 DRIAKMKKGVL-IVNNARGA-IMDTQAVVDACSSGHIA 229 (304)
Q Consensus 194 ~~l~~mk~g~i-lVn~~rg~-~vd~~aL~~aL~~g~i~ 229 (304)
+..+ .|.- +|..+.|- .-+++.|.++.++..+.
T Consensus 89 ea~~---~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~ 123 (294)
T 2yv1_A 89 EAID---AGIELIVVITEHIPVHDTMEFVNYAEDVGVK 123 (294)
T ss_dssp HHHH---TTCSEEEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred HHHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 3332 3332 55555553 34567888888876664
No 445
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=96.08 E-value=0.006 Score=58.55 Aligned_cols=107 Identities=17% Similarity=0.161 Sum_probs=67.0
Q ss_pred CEEEEEeeChhhHHHHHHhcc----------CCCeEE-EEcCCCCChhHHHhcCceecCCHHhhcC--cCCEEEEcCCCC
Q 021995 118 KTVGTVGCGRIGKLLLQRLKP----------FNCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLP--KCDIVVVNTPLT 184 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~----------~G~~V~-~~dr~~~~~~~~~~~g~~~~~~l~ell~--~aDvVi~~~p~~ 184 (304)
.+|||||+|.||+.+++.+.. .+.+|. ++|++....... ..+...+.++++++. +.|+|+.++|..
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~-~~~~~~~~d~~ell~d~diDvVve~tp~~ 89 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEAL-AGGLPLTTNPFDVVDDPEIDIVVELIGGL 89 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHH-HTTCCEESCTHHHHTCTTCCEEEECCCSS
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhh-cccCcccCCHHHHhcCCCCCEEEEcCCCc
Confidence 489999999999999877642 466655 566654222211 124455678999986 478999999853
Q ss_pred hhhhccccHHHHhcCCCCCEEEEcCCCchh-chHHHHHHHHcCCce
Q 021995 185 EKTRGMFDKDRIAKMKKGVLIVNNARGAIM-DTQAVVDACSSGHIA 229 (304)
Q Consensus 185 ~~t~~~i~~~~l~~mk~g~ilVn~~rg~~v-d~~aL~~aL~~g~i~ 229 (304)
..-. .-..+.|+.|.-+|..--+... ..+.|.++.++.+..
T Consensus 90 ~~h~----~~~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~ 131 (444)
T 3mtj_A 90 EPAR----ELVMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVM 131 (444)
T ss_dssp TTHH----HHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC
T ss_pred hHHH----HHHHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCe
Confidence 2111 2234556777777754332222 335677777766555
No 446
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.08 E-value=0.014 Score=51.88 Aligned_cols=66 Identities=17% Similarity=0.246 Sum_probs=46.0
Q ss_pred CCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCCh---hHH------HhcCcee-------cCCHHhhcCcCCEEEE
Q 021995 117 GKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDP---QLE------KETGAKF-------EEDLDTMLPKCDIVVV 179 (304)
Q Consensus 117 g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~---~~~------~~~g~~~-------~~~l~ell~~aDvVi~ 179 (304)
.++|.|.|. |.+|+.+++.|...|++|++.+|+.... +.. ...+++. .+++.++++++|+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 468999996 9999999999999999999999875321 111 1223321 1234566777888877
Q ss_pred cCC
Q 021995 180 NTP 182 (304)
Q Consensus 180 ~~p 182 (304)
+.+
T Consensus 84 ~a~ 86 (308)
T 1qyc_A 84 TVG 86 (308)
T ss_dssp CCC
T ss_pred CCc
Confidence 765
No 447
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=96.08 E-value=0.0063 Score=56.14 Aligned_cols=111 Identities=17% Similarity=0.173 Sum_probs=67.0
Q ss_pred CEEEEEeeChhhHHHHHHhccC--------CCeEE-EEcCCCCChhH-------HH---hcCce-ecC---CHHhhc-Cc
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF--------NCNLL-YHDRVKMDPQL-------EK---ETGAK-FEE---DLDTML-PK 173 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~--------G~~V~-~~dr~~~~~~~-------~~---~~g~~-~~~---~l~ell-~~ 173 (304)
.+|||||+|.||+.+++.+... +++|. ++|++...... .. ..++. .++ ++++++ .+
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~~~ 86 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALARD 86 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHHHSS
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHhCCC
Confidence 4899999999999999888643 35654 66776522111 11 11221 233 788877 45
Q ss_pred CCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCCch-hchHHHHHHHHcCCce
Q 021995 174 CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAI-MDTQAVVDACSSGHIA 229 (304)
Q Consensus 174 aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg~~-vd~~aL~~aL~~g~i~ 229 (304)
.|+|+.|+|.. .+...--+...+.|+.|.-+|...-..+ .+.+.|.++.++....
T Consensus 87 iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~ 142 (331)
T 3c8m_A 87 FDIVVDATPAS-ADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRR 142 (331)
T ss_dssp CSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCC
T ss_pred CCEEEECCCCC-CccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCE
Confidence 89999999964 1111111334556777887876544444 3345677666555543
No 448
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.08 E-value=0.0033 Score=56.49 Aligned_cols=65 Identities=23% Similarity=0.269 Sum_probs=44.9
Q ss_pred CEEEEEee-ChhhHHHHHHhc-cCCCeEE-EEcCCCCCh---hHH-----HhcCceecCCHHhhcCcCCEEEEcCC
Q 021995 118 KTVGTVGC-GRIGKLLLQRLK-PFNCNLL-YHDRVKMDP---QLE-----KETGAKFEEDLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 118 ~~vgIIG~-G~IG~~lA~~l~-~~G~~V~-~~dr~~~~~---~~~-----~~~g~~~~~~l~ell~~aDvVi~~~p 182 (304)
.+|+|+|+ |.||+.+++.+. .-|++++ ++|+++... +.. ...++...+++++++.++|+|+-+++
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft~ 81 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTR 81 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcCC
Confidence 48999998 999999999765 5688866 778754221 100 11233445678888889999995543
No 449
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.06 E-value=0.0054 Score=59.05 Aligned_cols=90 Identities=14% Similarity=0.160 Sum_probs=56.8
Q ss_pred cccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHH---hcCceec-CC-HHhhcCcCCEEEEcCCCChhh
Q 021995 113 YDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEK---ETGAKFE-ED-LDTMLPKCDIVVVNTPLTEKT 187 (304)
Q Consensus 113 ~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~---~~g~~~~-~~-l~ell~~aDvVi~~~p~~~~t 187 (304)
.++.|++|.|||.|.+|...++.|...|++|+++++... .+... +.++... .. -++.+.++|+|+.+ |..+..
T Consensus 8 ~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~-~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~a-t~~~~~ 85 (457)
T 1pjq_A 8 CQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFI-PQFTVWANEGMLTLVEGPFDETLLDSCWLAIAA-TDDDTV 85 (457)
T ss_dssp ECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCC-HHHHHHHTTTSCEEEESSCCGGGGTTCSEEEEC-CSCHHH
T ss_pred EECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCC-HHHHHHHhcCCEEEEECCCCccccCCccEEEEc-CCCHHH
Confidence 468999999999999999999999999999999998542 22111 1123211 11 12456688888765 444432
Q ss_pred hccccHHHHhcCCCCCEEEEc
Q 021995 188 RGMFDKDRIAKMKKGVLIVNN 208 (304)
Q Consensus 188 ~~~i~~~~l~~mk~g~ilVn~ 208 (304)
|.......+.-.+.||+
T Consensus 86 ----n~~i~~~a~~~~i~vn~ 102 (457)
T 1pjq_A 86 ----NQRVSDAAESRRIFCNV 102 (457)
T ss_dssp ----HHHHHHHHHHTTCEEEE
T ss_pred ----HHHHHHHHHHcCCEEEE
Confidence 23333334444455555
No 450
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=96.04 E-value=0.0034 Score=58.16 Aligned_cols=87 Identities=16% Similarity=0.171 Sum_probs=59.8
Q ss_pred CCCEEEEEeeChhhHHHHHHhccC-CCeEEEEcCCCCChhHHHhcCceec----CCH----HhhcC--cCCEEEEcCCCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKPF-NCNLLYHDRVKMDPQLEKETGAKFE----EDL----DTMLP--KCDIVVVNTPLT 184 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~~----~~l----~ell~--~aDvVi~~~p~~ 184 (304)
.|++|.|+|.|.+|...++.++.+ |++|++.++++.+.+.++++|+..+ +++ .++.. ..|+++-++...
T Consensus 186 ~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~v~~~~~g~g~Dvvid~~G~~ 265 (359)
T 1h2b_A 186 PGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQ 265 (359)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccchHHHHHHHHhCCCCCcEEEECCCCc
Confidence 578999999999999999999998 9999999987666677777776421 111 12221 478888877643
Q ss_pred h--hhhccccHHHHhcCCCCCEEEEcC
Q 021995 185 E--KTRGMFDKDRIAKMKKGVLIVNNA 209 (304)
Q Consensus 185 ~--~t~~~i~~~~l~~mk~g~ilVn~~ 209 (304)
+ .. ...++. ++..+|.++
T Consensus 266 ~~~~~-----~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 266 ATVDY-----TPYLLG--RMGRLIIVG 285 (359)
T ss_dssp HHHHH-----GGGGEE--EEEEEEECC
T ss_pred hHHHH-----HHHhhc--CCCEEEEEe
Confidence 2 22 122333 566677665
No 451
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=96.03 E-value=0.029 Score=53.31 Aligned_cols=67 Identities=16% Similarity=0.303 Sum_probs=52.3
Q ss_pred cCCCEEEEEe-----eCh---hhHHHHHHhccCCCeEEEEcCCCC--ChhHH-------HhcCc--eecCCHHhhcCcCC
Q 021995 115 LEGKTVGTVG-----CGR---IGKLLLQRLKPFNCNLLYHDRVKM--DPQLE-------KETGA--KFEEDLDTMLPKCD 175 (304)
Q Consensus 115 L~g~~vgIIG-----~G~---IG~~lA~~l~~~G~~V~~~dr~~~--~~~~~-------~~~g~--~~~~~l~ell~~aD 175 (304)
|.|++|+|+| +|. +.++++..+..+|++|.+..|... .++.. ++.|. ....++++.++++|
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~d~~eav~~AD 265 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTNSMAEAFKDAD 265 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEESCHHHHHTTCS
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhcCCC
Confidence 8899999997 354 999999999999999999998643 23221 23453 55679999999999
Q ss_pred EEEEcC
Q 021995 176 IVVVNT 181 (304)
Q Consensus 176 vVi~~~ 181 (304)
+|...+
T Consensus 266 VVytd~ 271 (418)
T 2yfk_A 266 VVYPKS 271 (418)
T ss_dssp EEEECC
T ss_pred EEEEcc
Confidence 998864
No 452
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.02 E-value=0.0042 Score=52.82 Aligned_cols=67 Identities=19% Similarity=0.254 Sum_probs=47.8
Q ss_pred CEEEEEe-eChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhc-----Ccee-cCCHHhhcCcCCEEEEcCCCC
Q 021995 118 KTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKET-----GAKF-EEDLDTMLPKCDIVVVNTPLT 184 (304)
Q Consensus 118 ~~vgIIG-~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~-----g~~~-~~~l~ell~~aDvVi~~~p~~ 184 (304)
++|.|.| .|.||+.+++.|...|++|++.+|+..+.+..... .+.. .+++.++++++|+|+.+....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~ 74 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSG 74 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCC
Confidence 4789999 79999999999999999999999975322111100 1111 224567888999999887654
No 453
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.01 E-value=0.011 Score=57.02 Aligned_cols=34 Identities=15% Similarity=0.238 Sum_probs=27.3
Q ss_pred CEEEEEeeChhhHHHHHHhcc-CCC---eEEEEcCCCC
Q 021995 118 KTVGTVGCGRIGKLLLQRLKP-FNC---NLLYHDRVKM 151 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~-~G~---~V~~~dr~~~ 151 (304)
++|.|||+|.||+.+++.+.. .++ +|++.|+...
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~ 51 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGT 51 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchh
Confidence 469999999999999998864 455 6888887543
No 454
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.97 E-value=0.0095 Score=54.35 Aligned_cols=68 Identities=22% Similarity=0.254 Sum_probs=44.8
Q ss_pred cCCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCC-hhHH------HhcCcee-------cCCHHhhcC--cCCEE
Q 021995 115 LEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMD-PQLE------KETGAKF-------EEDLDTMLP--KCDIV 177 (304)
Q Consensus 115 L~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~-~~~~------~~~g~~~-------~~~l~ell~--~aDvV 177 (304)
+..++|.|.|. |.+|+.+++.|...|++|++.+|+... .+.. ...++.. .+++.++++ ++|+|
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V 87 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIV 87 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence 44679999997 999999999999899999999997522 1111 1123221 123455666 77777
Q ss_pred EEcCC
Q 021995 178 VVNTP 182 (304)
Q Consensus 178 i~~~p 182 (304)
+.+..
T Consensus 88 i~~a~ 92 (346)
T 3i6i_A 88 VSTVG 92 (346)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 76665
No 455
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.95 E-value=0.025 Score=54.74 Aligned_cols=102 Identities=17% Similarity=0.106 Sum_probs=69.5
Q ss_pred ccCCCEEEEEee----------ChhhHHHHHHhccCCCeEEEEcCCCCChh---HHHh-c-------CceecCCHHhhcC
Q 021995 114 DLEGKTVGTVGC----------GRIGKLLLQRLKPFNCNLLYHDRVKMDPQ---LEKE-T-------GAKFEEDLDTMLP 172 (304)
Q Consensus 114 ~L~g~~vgIIG~----------G~IG~~lA~~l~~~G~~V~~~dr~~~~~~---~~~~-~-------g~~~~~~l~ell~ 172 (304)
.+.|++|+|+|+ ..-...+++.|...|++|.+|||.-...+ .... + .+...+++.+.++
T Consensus 332 ~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (481)
T 2o3j_A 332 TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITVESDPYAAAR 411 (481)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEEESSHHHHHT
T ss_pred ccCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCCEEEEECCCCCchhhHHHHHhhhccccccCceeecCCHHHHHc
Confidence 478999999997 45678899999999999999999643211 1111 1 1344467888999
Q ss_pred cCCEEEEcCCCChhhhccccHH-HHhcCCCCCEEEEcCCCchhchHHH
Q 021995 173 KCDIVVVNTPLTEKTRGMFDKD-RIAKMKKGVLIVNNARGAIMDTQAV 219 (304)
Q Consensus 173 ~aDvVi~~~p~~~~t~~~i~~~-~l~~mk~g~ilVn~~rg~~vd~~aL 219 (304)
++|+|++++... +.+ -++-+ ..+.|+...+++|. |+- +|.+.+
T Consensus 412 ~ad~~vi~t~~~-~f~-~~~~~~~~~~~~~~~~i~D~-r~~-~~~~~~ 455 (481)
T 2o3j_A 412 GAHAIVVLTEWD-EFV-ELNYSQIHNDMQHPAAIFDG-RLI-LDQKAL 455 (481)
T ss_dssp TCSEEEECSCCG-GGT-TSCHHHHHHHSCSSCEEEES-SSC-SCHHHH
T ss_pred CCCEEEEcCCcH-Hhh-ccCHHHHHHhcCCCCEEEEC-CCC-CCHHHH
Confidence 999999999864 222 23444 44567776688886 543 454433
No 456
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=95.94 E-value=0.0051 Score=56.81 Aligned_cols=97 Identities=16% Similarity=0.180 Sum_probs=61.2
Q ss_pred CCCEEEEEe-eChhhHHHHHHhccCCCeEEEEcCCCCCh--hHHHhc-Ccee-----c---CCHHhhcCcCCEEEEcCCC
Q 021995 116 EGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDP--QLEKET-GAKF-----E---EDLDTMLPKCDIVVVNTPL 183 (304)
Q Consensus 116 ~g~~vgIIG-~G~IG~~lA~~l~~~G~~V~~~dr~~~~~--~~~~~~-g~~~-----~---~~l~ell~~aDvVi~~~p~ 183 (304)
.+++|.|.| .|.+|+.+++.|...|++|++.+|+.... ...... ++.. . +++.++++++|+|+.+...
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 467899999 59999999999988899999999876543 111111 2211 1 1356778999999876653
Q ss_pred ChhhhccccHHHHhcCCC-C--CEEEEcCCCc
Q 021995 184 TEKTRGMFDKDRIAKMKK-G--VLIVNNARGA 212 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~mk~-g--~ilVn~~rg~ 212 (304)
............++.+++ | ..||++|...
T Consensus 84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred CCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 211111222444444432 3 4788888754
No 457
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.94 E-value=0.012 Score=52.25 Aligned_cols=67 Identities=19% Similarity=0.214 Sum_probs=46.8
Q ss_pred CCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCC-CC--h-hHH------HhcCcee-------cCCHHhhcCcCCEEE
Q 021995 117 GKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVK-MD--P-QLE------KETGAKF-------EEDLDTMLPKCDIVV 178 (304)
Q Consensus 117 g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~-~~--~-~~~------~~~g~~~-------~~~l~ell~~aDvVi 178 (304)
+++|.|.|. |.+|+.+++.|...|++|++.+|+. .. + +.. ...+++. .+++.++++++|+|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 578999996 9999999999998899999999865 11 1 111 1223321 124556788889888
Q ss_pred EcCCC
Q 021995 179 VNTPL 183 (304)
Q Consensus 179 ~~~p~ 183 (304)
.+.+.
T Consensus 82 ~~a~~ 86 (307)
T 2gas_A 82 CAAGR 86 (307)
T ss_dssp ECSSS
T ss_pred ECCcc
Confidence 77664
No 458
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=95.91 E-value=0.014 Score=51.38 Aligned_cols=39 Identities=23% Similarity=0.288 Sum_probs=34.6
Q ss_pred cccCCCEEEEEeeC---hhhHHHHHHhccCCCeEEEEcCCCC
Q 021995 113 YDLEGKTVGTVGCG---RIGKLLLQRLKPFNCNLLYHDRVKM 151 (304)
Q Consensus 113 ~~L~g~~vgIIG~G---~IG~~lA~~l~~~G~~V~~~dr~~~ 151 (304)
.+|+||++.|-|.+ .||+++|+.|...|++|++.+|+..
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~ 43 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKER 43 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHH
Confidence 36899999999974 6999999999999999999998653
No 459
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.89 E-value=0.011 Score=54.69 Aligned_cols=63 Identities=14% Similarity=0.163 Sum_probs=46.1
Q ss_pred hhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCCe-EEEEcCC
Q 021995 73 VVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCN-LLYHDRV 149 (304)
Q Consensus 73 ~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~~-V~~~dr~ 149 (304)
....||.++-+=|-+.|- .-|... ....|.+++|.|||+|.+|..+++.|...|.. ++++|+.
T Consensus 4 p~~~~~~~~~lnl~lm~w----------Rll~~~----g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 4 PLKIADQSVDLNLKLMKW----------RILPDL----NLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HHHHHHHHHHHHHHHHHH----------HTCTTC----CHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHH----------hhcchh----hHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 456788887777777651 011111 12368999999999999999999999999974 7888864
No 460
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.87 E-value=0.02 Score=51.40 Aligned_cols=65 Identities=20% Similarity=0.275 Sum_probs=47.4
Q ss_pred CEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCC-ChhHH---HhcCcee-------cCCHHhhcCcCCEEEEcCC
Q 021995 118 KTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKM-DPQLE---KETGAKF-------EEDLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 118 ~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~-~~~~~---~~~g~~~-------~~~l~ell~~aDvVi~~~p 182 (304)
++|.|.|. |.+|+.+++.|...|++|.+.+|+.. ..... ...+++. .+++.++++++|+|+.+.+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 58999995 99999999999989999999998764 22211 1234332 1345677888999987765
No 461
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=95.83 E-value=0.0062 Score=55.19 Aligned_cols=72 Identities=17% Similarity=0.132 Sum_probs=50.1
Q ss_pred ccccCCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChh-HHHh-cCce-------ecCCHHhhcC--cCCEEEE
Q 021995 112 AYDLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQ-LEKE-TGAK-------FEEDLDTMLP--KCDIVVV 179 (304)
Q Consensus 112 ~~~L~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~-~~~~-~g~~-------~~~~l~ell~--~aDvVi~ 179 (304)
...+.|++|.|.|. |.||+.+++.|...|++|++.+|+..... .... .++. ..++++++++ .+|+|+.
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih 94 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVH 94 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEE
Confidence 45789999999996 99999999999999999999998643221 0011 1111 1123456677 8899987
Q ss_pred cCCC
Q 021995 180 NTPL 183 (304)
Q Consensus 180 ~~p~ 183 (304)
+...
T Consensus 95 ~A~~ 98 (330)
T 2pzm_A 95 SAAA 98 (330)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 7653
No 462
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.83 E-value=0.033 Score=51.75 Aligned_cols=93 Identities=22% Similarity=0.320 Sum_probs=59.8
Q ss_pred CCCEEEEEe-eChhhHHHHHHhccC-CCeEEEEcC-CCCChhHH-------HhcCceecCCHHhhcCcCCEEEEcCCCCh
Q 021995 116 EGKTVGTVG-CGRIGKLLLQRLKPF-NCNLLYHDR-VKMDPQLE-------KETGAKFEEDLDTMLPKCDIVVVNTPLTE 185 (304)
Q Consensus 116 ~g~~vgIIG-~G~IG~~lA~~l~~~-G~~V~~~dr-~~~~~~~~-------~~~g~~~~~~l~ell~~aDvVi~~~p~~~ 185 (304)
.-.+||||| .|.+|+.+.+.|... ..++..+.. +....... .+.-++.. +.++++.++|++++|+|...
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~-~~~~~~~~~Dvvf~alp~~~ 90 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEF-DPEKVSKNCDVLFTALPAGA 90 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCC-CHHHHHHHCSEEEECCSTTH
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeC-CHHHhhcCCCEEEECCCcHH
Confidence 345899998 699999999999765 346665543 22111111 11111222 45566678999999999543
Q ss_pred hhhccccHHHHhcCCCCCEEEEcCCCchhch
Q 021995 186 KTRGMFDKDRIAKMKKGVLIVNNARGAIMDT 216 (304)
Q Consensus 186 ~t~~~i~~~~l~~mk~g~ilVn~~rg~~vd~ 216 (304)
. .+..+.+ .|+.+||.|..-=.+.
T Consensus 91 s------~~~~~~~-~g~~VIDlSsdfRl~~ 114 (351)
T 1vkn_A 91 S------YDLVREL-KGVKIIDLGADFRFDD 114 (351)
T ss_dssp H------HHHHTTC-CSCEEEESSSTTTCSS
T ss_pred H------HHHHHHh-CCCEEEECChhhhCCc
Confidence 3 5666677 8999999996544443
No 463
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=95.81 E-value=0.0045 Score=57.09 Aligned_cols=89 Identities=19% Similarity=0.206 Sum_probs=61.2
Q ss_pred CC--CEEEEEee-ChhhHHHHHHhccCCC-eEEEEcCCCCChhHHHh-cCceec-----CCHHhhc----C-cCCEEEEc
Q 021995 116 EG--KTVGTVGC-GRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKE-TGAKFE-----EDLDTML----P-KCDIVVVN 180 (304)
Q Consensus 116 ~g--~~vgIIG~-G~IG~~lA~~l~~~G~-~V~~~dr~~~~~~~~~~-~g~~~~-----~~l~ell----~-~aDvVi~~ 180 (304)
.| ++|.|.|. |.||..+++.++..|+ +|++.+++....+...+ +|.... .++.+.+ . ..|+++.+
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~vi~~ 237 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDN 237 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCCCEEEEC
Confidence 46 89999998 9999999999999999 99999986544444444 564321 1222211 1 47888777
Q ss_pred CCCChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 181 TPLTEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 181 ~p~~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
... . .-...++.++++..+|.++.
T Consensus 238 ~G~--~----~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 238 VGG--N----ISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp CCH--H----HHHHHHHTEEEEEEEEECCC
T ss_pred CCH--H----HHHHHHHHhccCcEEEEECC
Confidence 752 1 12566777888888888764
No 464
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.80 E-value=0.0061 Score=51.86 Aligned_cols=66 Identities=17% Similarity=0.134 Sum_probs=47.4
Q ss_pred CEEEEEe-eChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCce-------ecCCHHhhcCcCCEEEEcCCCC
Q 021995 118 KTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAK-------FEEDLDTMLPKCDIVVVNTPLT 184 (304)
Q Consensus 118 ~~vgIIG-~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-------~~~~l~ell~~aDvVi~~~p~~ 184 (304)
++|.|.| .|.||+.+++.|...|++|++.+|++.+..... .++. ..++++++++++|+|+.+....
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~ 78 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN-EHLKVKKADVSSLDEVCEVCKGADAVISAFNPG 78 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC-TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc-CceEEEEecCCCHHHHHHHhcCCCEEEEeCcCC
Confidence 6899999 599999999999999999999999753221110 1111 1234567889999998887543
No 465
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=95.79 E-value=0.0058 Score=56.45 Aligned_cols=102 Identities=13% Similarity=0.171 Sum_probs=63.2
Q ss_pred CEEEEEeeChhhHHHHHHhccC---------CCeEE-EEcCCCCChhHHHhcCceecCCHHhhcCcCCEEEEcCCCChhh
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF---------NCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKT 187 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~---------G~~V~-~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvVi~~~p~~~~t 187 (304)
.+|||||+|.||+.+++.+... +++|. ++|++..+.... .. ...++++++++ +.|+|+.|+|.....
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~-~~-~~~~~d~~~ll-~iDvVve~t~~~~~a 80 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAI-PQ-ELLRAEPFDLL-EADLVVEAMGGVEAP 80 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSS-CG-GGEESSCCCCT-TCSEEEECCCCSHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhcc-Cc-ccccCCHHHHh-CCCEEEECCCCcHHH
Confidence 3799999999999999988654 45654 667764322111 01 12356788888 999999999855221
Q ss_pred hccccHHHHhcCCCCCEEEEcCCCch-hchHHHHHHHHcC
Q 021995 188 RGMFDKDRIAKMKKGVLIVNNARGAI-MDTQAVVDACSSG 226 (304)
Q Consensus 188 ~~~i~~~~l~~mk~g~ilVn~~rg~~-vd~~aL~~aL~~g 226 (304)
. .-..+.|+.|.-+|...-..+ ...+.|.++.++.
T Consensus 81 ~----~~~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 81 L----RLVLPALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp H----HHHHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred H----HHHHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 1 122345566666666433333 2445677666665
No 466
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.79 E-value=0.018 Score=53.58 Aligned_cols=30 Identities=30% Similarity=0.495 Sum_probs=25.7
Q ss_pred CEEEEEeeChhhHHHHHHhccC-CCeEEEEc
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF-NCNLLYHD 147 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~-G~~V~~~d 147 (304)
.+|||+|+|.||+.+.+.|... .++|++.+
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivain 48 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAIN 48 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEec
Confidence 4899999999999999998765 68877665
No 467
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=95.79 E-value=0.018 Score=53.17 Aligned_cols=89 Identities=20% Similarity=0.206 Sum_probs=52.1
Q ss_pred CEEEEEeeChhhHHHHHHhcc-CCCeEEEEcCCCCChhHHH---h----cC-------------------ce--ecCCHH
Q 021995 118 KTVGTVGCGRIGKLLLQRLKP-FNCNLLYHDRVKMDPQLEK---E----TG-------------------AK--FEEDLD 168 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~-~G~~V~~~dr~~~~~~~~~---~----~g-------------------~~--~~~~l~ 168 (304)
.+|||+|+|.||+.+++.+.. -+++|++.+......+... + +| +. ...+++
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~~ 83 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS 83 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCHH
Confidence 489999999999999998864 4688776543101122110 0 00 00 112455
Q ss_pred hhc---CcCCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCCC
Q 021995 169 TML---PKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARG 211 (304)
Q Consensus 169 ell---~~aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~rg 211 (304)
++- .++|+|+.|+|..... +..-+.++.|+..|.++-+
T Consensus 84 ~l~~~~~~vDvV~eatg~~~~~-----e~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 84 KIKWGDAGAEYVVESTGVFTTM-----EKAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp GCCTTTTTCCEEEECSSSCCSH-----HHHGGGGGGTCSEEEESSC
T ss_pred HCccccCCCCEEEECCCchhhH-----HHHHHHHhCCCeEEEeccC
Confidence 552 5799999999854221 2233445667666666543
No 468
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=95.77 E-value=0.0087 Score=52.73 Aligned_cols=96 Identities=13% Similarity=0.163 Sum_probs=59.2
Q ss_pred CEEEEEee-ChhhHHHHHHhccC--CCeEEEEcCCCCChhHHHhcCcee-------cCCHHhhcCcCCEEEEcCCCChhh
Q 021995 118 KTVGTVGC-GRIGKLLLQRLKPF--NCNLLYHDRVKMDPQLEKETGAKF-------EEDLDTMLPKCDIVVVNTPLTEKT 187 (304)
Q Consensus 118 ~~vgIIG~-G~IG~~lA~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~-------~~~l~ell~~aDvVi~~~p~~~~t 187 (304)
++|.|.|. |.||+.+++.|... |++|++.+|++.+.......++.. .+++.++++++|+|+.+.......
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~ 80 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDN 80 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSCH
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcCc
Confidence 46888986 99999999999988 999999998765443322223321 134567888999998776532110
Q ss_pred -hccc-cHHHHhcCC-CC-CEEEEcCCCch
Q 021995 188 -RGMF-DKDRIAKMK-KG-VLIVNNARGAI 213 (304)
Q Consensus 188 -~~~i-~~~~l~~mk-~g-~ilVn~~rg~~ 213 (304)
.++. ....++.++ .+ ..||.+|....
T Consensus 81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~ 110 (287)
T 2jl1_A 81 TLLIVQHANVVKAARDAGVKHIAYTGYAFA 110 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEETTG
T ss_pred hHHHHHHHHHHHHHHHcCCCEEEEECCCCC
Confidence 0110 122333332 23 37888876543
No 469
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=95.70 E-value=0.0097 Score=56.50 Aligned_cols=66 Identities=18% Similarity=0.268 Sum_probs=46.9
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcC--ceecC---CHHhhcCcCCEEEE
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETG--AKFEE---DLDTMLPKCDIVVV 179 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g--~~~~~---~l~ell~~aDvVi~ 179 (304)
-+.|++|+|+|-|.+|+.+++.++.+|++|+++|+++..+....... ...+. .+.++++++|+|+.
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEAVST 102 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence 46899999999999999999999999999999998664332211100 11112 24456678898874
No 470
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.68 E-value=0.0074 Score=53.41 Aligned_cols=66 Identities=12% Similarity=0.068 Sum_probs=47.9
Q ss_pred CEEEEEe-eChhhHHHHHHhccC-CCeEEEEcCCCCChhHHHhcCcee-------cCCHHhhcCcCCEEEEcCCC
Q 021995 118 KTVGTVG-CGRIGKLLLQRLKPF-NCNLLYHDRVKMDPQLEKETGAKF-------EEDLDTMLPKCDIVVVNTPL 183 (304)
Q Consensus 118 ~~vgIIG-~G~IG~~lA~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~-------~~~l~ell~~aDvVi~~~p~ 183 (304)
++|.|.| .|.||+.+++.|... |++|.+.+|++.+.......+++. .++++++++++|+|+.+.+.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 4689999 599999999999887 999999998764332222223321 13456789999999887764
No 471
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=95.67 E-value=0.017 Score=51.74 Aligned_cols=38 Identities=21% Similarity=0.179 Sum_probs=34.1
Q ss_pred cccCCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCC
Q 021995 113 YDLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVK 150 (304)
Q Consensus 113 ~~L~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~ 150 (304)
.++.||++.|.|. |.||+++|+.|...|++|++.+++.
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~ 81 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDE 81 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4689999999985 7899999999999999999998865
No 472
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.66 E-value=0.025 Score=53.87 Aligned_cols=113 Identities=14% Similarity=0.155 Sum_probs=72.8
Q ss_pred ccCCCEEEEEeeChhhHHHHHHhccCCCeEEEEcCCCCCh--hHHHhcCceec--CCHHhhcCcCCEEEEcCCC---Chh
Q 021995 114 DLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDP--QLEKETGAKFE--EDLDTMLPKCDIVVVNTPL---TEK 186 (304)
Q Consensus 114 ~L~g~~vgIIG~G~IG~~lA~~l~~~G~~V~~~dr~~~~~--~~~~~~g~~~~--~~l~ell~~aDvVi~~~p~---~~~ 186 (304)
++.+++|.|||.|..|.+.|+.|...|++|+++|...... .... .|+... ....+.+..+|.|++.-.. .|.
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~~~~~~~~d~vV~s~gi~~~~p~ 80 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLNDEWLMAADLIVASPGIALAHPS 80 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCCHHHHHTCSEEEECTTSCTTCHH
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCcHHHhccCCEEEeCCCCCCCCHH
Confidence 3678999999999999999999999999999999765332 2233 455432 1124455589998886322 232
Q ss_pred hh-------ccccH-HHH-hcCCCCCEEEEcCCCchhchHHHHHHHHcCC
Q 021995 187 TR-------GMFDK-DRI-AKMKKGVLIVNNARGAIMDTQAVVDACSSGH 227 (304)
Q Consensus 187 t~-------~~i~~-~~l-~~mk~g~ilVn~~rg~~vd~~aL~~aL~~g~ 227 (304)
.. .++.+ +.+ ..++...+-|--+.|+.-...-|...|++..
T Consensus 81 ~~~a~~~~~~v~~~~~~~~~~~~~~vI~VTGTnGKTTT~~ml~~iL~~~g 130 (439)
T 2x5o_A 81 LSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAG 130 (439)
T ss_dssp HHHHHHTTCEEECHHHHHHHHCCSCEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCcEEEHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcC
Confidence 21 12322 122 2245446666666788887777777777643
No 473
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.66 E-value=0.018 Score=51.96 Aligned_cols=65 Identities=15% Similarity=0.167 Sum_probs=46.8
Q ss_pred CEEEEEe-eChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCcee-------cCCHHhhcCcCCEEEEcCC
Q 021995 118 KTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF-------EEDLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 118 ~~vgIIG-~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-------~~~l~ell~~aDvVi~~~p 182 (304)
++|.|.| .|.||+.+++.|...|++|++.+|+....+.....++.. .++++++++++|+|+.+..
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 5899999 599999999999999999999998765433222223321 1235577889999987765
No 474
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=95.64 E-value=0.012 Score=53.37 Aligned_cols=104 Identities=15% Similarity=0.187 Sum_probs=67.4
Q ss_pred CEEEEEee-ChhhHHHHHHhccCCCe-EEEEcCCCCChhHHHhcCceecCCHHhhcC--c-CCEEEEcCCCChhhhcccc
Q 021995 118 KTVGTVGC-GRIGKLLLQRLKPFNCN-LLYHDRVKMDPQLEKETGAKFEEDLDTMLP--K-CDIVVVNTPLTEKTRGMFD 192 (304)
Q Consensus 118 ~~vgIIG~-G~IG~~lA~~l~~~G~~-V~~~dr~~~~~~~~~~~g~~~~~~l~ell~--~-aDvVi~~~p~~~~t~~~i~ 192 (304)
.++.|+|. |++|+.+++.+...|++ |..+++.....+ -.|+..+.+++++.. . .|++++++|... +...+
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~VnP~~~g~~---i~G~~vy~sl~el~~~~~~~DvaIi~vp~~~-~~~~v- 88 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKGGSE---VHGVPVYDSVKEALAEHPEINTSIVFVPAPF-APDAV- 88 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCE---ETTEEEESSHHHHHHHCTTCCEEEECCCGGG-HHHHH-
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCce---ECCEeeeCCHHHHhhcCCCCCEEEEecCHHH-HHHHH-
Confidence 45777798 99999999999888998 345665321111 247777789999886 5 999999998532 22222
Q ss_pred HHHHhcCCCCCE-EEEcCCCc-hhchHHHHHHHHcCCce
Q 021995 193 KDRIAKMKKGVL-IVNNARGA-IMDTQAVVDACSSGHIA 229 (304)
Q Consensus 193 ~~~l~~mk~g~i-lVn~~rg~-~vd~~aL~~aL~~g~i~ 229 (304)
++..+ .|.- +|..+.|- ..+++.|.++.++..+.
T Consensus 89 ~ea~~---~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~ 124 (297)
T 2yv2_A 89 YEAVD---AGIRLVVVITEGIPVHDTMRFVNYARQKGAT 124 (297)
T ss_dssp HHHHH---TTCSEEEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HHHHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 22322 2332 55555553 23566788888876664
No 475
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.62 E-value=0.015 Score=51.76 Aligned_cols=66 Identities=17% Similarity=0.075 Sum_probs=48.7
Q ss_pred CCEEEEEee-ChhhHHHHHHhccCC-CeEEEEcCCCCChh--HHHhcCcee-------cCCHHhhcCcCCEEEEcCC
Q 021995 117 GKTVGTVGC-GRIGKLLLQRLKPFN-CNLLYHDRVKMDPQ--LEKETGAKF-------EEDLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 117 g~~vgIIG~-G~IG~~lA~~l~~~G-~~V~~~dr~~~~~~--~~~~~g~~~-------~~~l~ell~~aDvVi~~~p 182 (304)
.++|.|.|. |.+|+.+++.|...| ++|.+.+|++.+.. .....+++. .+++.++++++|+|+.+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 578999997 999999999998888 99999999765431 112234322 1345678899999988765
No 476
>3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A*
Probab=95.60 E-value=0.23 Score=46.22 Aligned_cols=104 Identities=17% Similarity=0.174 Sum_probs=70.0
Q ss_pred HHHhCCcEEEEcCCCChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEee-------Chhh
Q 021995 57 AAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGC-------GRIG 129 (304)
Q Consensus 57 ~~~~~gI~v~n~~g~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~-------G~IG 129 (304)
.++-..|+|.|. |.+..++ .+|+=++.+.+++ ...++.|++++++|. .++.
T Consensus 152 ~a~~~~vPVIN~-g~~~HPt--QaL~Dl~Ti~e~~-------------------G~~dl~g~kv~~~~~~~gd~~~~~Va 209 (359)
T 3kzn_A 152 FAKYSPVPVINM-ETITHPC--QELAHALALQEHF-------------------GTPDLRGKKYVLTWTYHPKPLNTAVA 209 (359)
T ss_dssp HHHHCSSCEEES-SSSCCHH--HHHHHHHHHHHHH-------------------TSSCCTTCEEEEEECCCSSCCCSHHH
T ss_pred HHHhCCCcccCc-ccccCch--HHHHHHHHHHHHc-------------------CCccccCCeEEEEEeecCCccccchh
Confidence 456688999995 5544332 2455555554421 112589999999985 3588
Q ss_pred HHHHHHhccCCCeEEEEcCCC--CChh-H-------HHhcC--ceecCCHHhhcCcCCEEEEcCC
Q 021995 130 KLLLQRLKPFNCNLLYHDRVK--MDPQ-L-------EKETG--AKFEEDLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 130 ~~lA~~l~~~G~~V~~~dr~~--~~~~-~-------~~~~g--~~~~~~l~ell~~aDvVi~~~p 182 (304)
++....+..+|++|.++.+.+ .+.+ . +.+.| +....++++.++++|+|....-
T Consensus 210 ~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDvvyt~r~ 274 (359)
T 3kzn_A 210 NSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKSW 274 (359)
T ss_dssp HHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCSEEEEECC
T ss_pred hhhHHHHHhccccEEEEecccccCCCHHHHHHHHHHHHhhCCCcccccCHHHHhcCCeEEEEEEE
Confidence 899999999999999988742 1111 1 12233 3456799999999999987643
No 477
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=95.59 E-value=0.011 Score=52.58 Aligned_cols=37 Identities=16% Similarity=0.283 Sum_probs=33.6
Q ss_pred ccCCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCC
Q 021995 114 DLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVK 150 (304)
Q Consensus 114 ~L~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~ 150 (304)
+|+||++.|-|. +.||+++|+.|...|++|++++++.
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~ 41 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLE 41 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH
Confidence 799999999986 5699999999999999999999864
No 478
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=95.58 E-value=0.016 Score=52.65 Aligned_cols=70 Identities=24% Similarity=0.235 Sum_probs=49.9
Q ss_pred ccCCCEEEEEe-eChhhHHHHHHhccCCCeEEEEcCCCCChhH-HHh----------cCcee-------cCCHHhhcCcC
Q 021995 114 DLEGKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQL-EKE----------TGAKF-------EEDLDTMLPKC 174 (304)
Q Consensus 114 ~L~g~~vgIIG-~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~-~~~----------~g~~~-------~~~l~ell~~a 174 (304)
.+.+++|.|.| .|.||+.+++.|...|++|++.+|+...... ... .++.. .++++++++++
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 46789999999 5999999999999999999999986543221 111 12211 12356778899
Q ss_pred CEEEEcCCC
Q 021995 175 DIVVVNTPL 183 (304)
Q Consensus 175 DvVi~~~p~ 183 (304)
|+|+.+...
T Consensus 102 d~Vih~A~~ 110 (351)
T 3ruf_A 102 DHVLHQAAL 110 (351)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 999877653
No 479
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=95.57 E-value=0.012 Score=54.92 Aligned_cols=86 Identities=20% Similarity=0.266 Sum_probs=48.8
Q ss_pred CEEEEEeeChhhHHHHHHhccC----CCeEE-EEcCCCCChhHHHhc-CceecCCHHhhcCc------------------
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF----NCNLL-YHDRVKMDPQLEKET-GAKFEEDLDTMLPK------------------ 173 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~----G~~V~-~~dr~~~~~~~~~~~-g~~~~~~l~ell~~------------------ 173 (304)
.+|||||+|.||+.+++.+... +++|. ++|++. .....++ |+..+.++++++..
T Consensus 5 i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~--~~~~~~~~gi~~~~~~~e~l~~~~~~~~did~v~e~~~~~ 82 (358)
T 1ebf_A 5 VNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAER--SLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHLKTS 82 (358)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSB--EEECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHHHTTC
T ss_pred EEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECCh--hhhccccCCCCccccHHHHHhcccCCCCCHHHHHHHhhhc
Confidence 3799999999999999998764 35654 455422 1111122 33333455555433
Q ss_pred --CCEEEEcCCCChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 174 --CDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 174 --aDvVi~~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
.|+|+.|+|..... ....+.|+.|.-+|...-
T Consensus 83 ~~~DvVV~~t~~~~~a-----~~~~~AL~aGkhVVtaNk 116 (358)
T 1ebf_A 83 PKPVILVDNTSSAYIA-----GFYTKFVENGISIATPNK 116 (358)
T ss_dssp SSCEEEEECSCCHHHH-----TTHHHHHHTTCEEECCCC
T ss_pred cCCcEEEEcCCChHHH-----HHHHHHHHCCCeEEecCc
Confidence 27888888854321 122344556666655433
No 480
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=95.56 E-value=0.012 Score=53.51 Aligned_cols=72 Identities=13% Similarity=0.078 Sum_probs=46.1
Q ss_pred ccccCCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhH-HHhcCceecCCHHhhcCcCCEEEEcCCC
Q 021995 112 AYDLEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQL-EKETGAKFEEDLDTMLPKCDIVVVNTPL 183 (304)
Q Consensus 112 ~~~L~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~-~~~~g~~~~~~l~ell~~aDvVi~~~p~ 183 (304)
.....+++|.|.|. |.||+.+++.|...|++|++.+|+...... .....+...++++++++++|+|+.+...
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~ 87 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAF 87 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCCCEEEECCcc
Confidence 34688999999997 999999999999999999999987533100 0000111123456788899999877653
No 481
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=95.55 E-value=0.062 Score=50.73 Aligned_cols=68 Identities=16% Similarity=0.318 Sum_probs=52.0
Q ss_pred ccCCCEEEEEee-----C---hhhHHHHHHhccCCCeEEEEcCCCC--ChhHH-------HhcCc--eecCCHHhhcCcC
Q 021995 114 DLEGKTVGTVGC-----G---RIGKLLLQRLKPFNCNLLYHDRVKM--DPQLE-------KETGA--KFEEDLDTMLPKC 174 (304)
Q Consensus 114 ~L~g~~vgIIG~-----G---~IG~~lA~~l~~~G~~V~~~dr~~~--~~~~~-------~~~g~--~~~~~l~ell~~a 174 (304)
.|.|++|+|+|. | ++.++++..+..+|++|.+..|... .++.. +..|. ....++++.++++
T Consensus 188 ~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~d~~eav~~a 267 (399)
T 3q98_A 188 NLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDA 267 (399)
T ss_dssp GGTTCEEEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTC
T ss_pred ccCCCEEEEEEecccccCcchHHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhCCC
Confidence 478999999984 4 6889999999999999999988642 22222 23453 4567999999999
Q ss_pred CEEEEcC
Q 021995 175 DIVVVNT 181 (304)
Q Consensus 175 DvVi~~~ 181 (304)
|+|..-+
T Consensus 268 DvVytd~ 274 (399)
T 3q98_A 268 DIVYPKS 274 (399)
T ss_dssp SEEEECC
T ss_pred CEEEecC
Confidence 9998754
No 482
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=95.52 E-value=0.0066 Score=52.40 Aligned_cols=66 Identities=20% Similarity=0.188 Sum_probs=43.4
Q ss_pred CEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcC----cCCEEEEcCCC
Q 021995 118 KTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLP----KCDIVVVNTPL 183 (304)
Q Consensus 118 ~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~----~aDvVi~~~p~ 183 (304)
|+|.|.|. |.||+.+++.|...|++|++.+|+....+......+...++++++++ ..|+|+.+...
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~ 72 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGV 72 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTCCSEEEECCCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCCccEEEECCCC
Confidence 57889986 99999999999999999999998754321100000001123444443 78999877643
No 483
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=95.51 E-value=0.014 Score=54.05 Aligned_cols=88 Identities=16% Similarity=0.209 Sum_probs=54.4
Q ss_pred CEEEEEe-eChhhHHHHHHhcc-CCCeEEEE-cCCC--CChh-HH------Hhc-CceecC--CHHhhcCcCCEEEEcCC
Q 021995 118 KTVGTVG-CGRIGKLLLQRLKP-FNCNLLYH-DRVK--MDPQ-LE------KET-GAKFEE--DLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 118 ~~vgIIG-~G~IG~~lA~~l~~-~G~~V~~~-dr~~--~~~~-~~------~~~-g~~~~~--~l~ell~~aDvVi~~~p 182 (304)
.+|+|+| .|.+|+.+.+.|.. -.+++..+ ++++ ...+ .. ... .....+ +.+++++++|+|++|+|
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a~p 84 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATA 84 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEECSC
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEECCC
Confidence 5899999 69999999999976 45676655 3321 1111 11 110 111111 45555589999999999
Q ss_pred CChhhhccccHHHHh-cCCCCCEEEEcCCC
Q 021995 183 LTEKTRGMFDKDRIA-KMKKGVLIVNNARG 211 (304)
Q Consensus 183 ~~~~t~~~i~~~~l~-~mk~g~ilVn~~rg 211 (304)
.... .+..+ .++.|+.+||.|..
T Consensus 85 ~~~s------~~~~~~~~~~g~~vIDlSa~ 108 (337)
T 3dr3_A 85 HEVS------HDLAPQFLEAGCVVFDLSGA 108 (337)
T ss_dssp HHHH------HHHHHHHHHTTCEEEECSST
T ss_pred hHHH------HHHHHHHHHCCCEEEEcCCc
Confidence 4322 22222 24679999999854
No 484
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=95.50 E-value=0.025 Score=55.25 Aligned_cols=113 Identities=14% Similarity=0.123 Sum_probs=74.2
Q ss_pred cCCCEEEEEeeChhhHH-HHHHhccCCCeEEEEcCCCCCh--hHHHhcCceec--CCHHhhcCcCCEEEEc--CCC-Chh
Q 021995 115 LEGKTVGTVGCGRIGKL-LLQRLKPFNCNLLYHDRVKMDP--QLEKETGAKFE--EDLDTMLPKCDIVVVN--TPL-TEK 186 (304)
Q Consensus 115 L~g~~vgIIG~G~IG~~-lA~~l~~~G~~V~~~dr~~~~~--~~~~~~g~~~~--~~l~ell~~aDvVi~~--~p~-~~~ 186 (304)
..+++|-|||.|.+|.+ +|+.|+..|++|.++|....+. +..++.|+... ...+.+..++|+|+.. +|. +|.
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~~~~~d~vV~Spgi~~~~p~ 96 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHLQPAPDLVVVGNAMKRGMDV 96 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGGGCSCCSEEEECTTCCTTSHH
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHHcCCCCCEEEECCCcCCCCHH
Confidence 46789999999999996 7899999999999999864332 33455676543 2345555679999875 332 332
Q ss_pred hhc-------cccH-HHHhc--CCC-CCEEEEcCCCchhchHHHHHHHHcCC
Q 021995 187 TRG-------MFDK-DRIAK--MKK-GVLIVNNARGAIMDTQAVVDACSSGH 227 (304)
Q Consensus 187 t~~-------~i~~-~~l~~--mk~-g~ilVn~~rg~~vd~~aL~~aL~~g~ 227 (304)
... ++.+ +++.. +++ ..+-|--+.|+.-...-+...|+...
T Consensus 97 l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~G 148 (524)
T 3hn7_A 97 IEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYAG 148 (524)
T ss_dssp HHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHcC
Confidence 211 2332 34443 333 34566666799888888888888654
No 485
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=95.48 E-value=0.019 Score=52.15 Aligned_cols=114 Identities=14% Similarity=0.230 Sum_probs=64.1
Q ss_pred CEEEEEe-eChhhHHHHHHhccCCC--eEEEEcC--CCCChhH-HHhc--------CceecCCHHhhcCcCCEEEEcCCC
Q 021995 118 KTVGTVG-CGRIGKLLLQRLKPFNC--NLLYHDR--VKMDPQL-EKET--------GAKFEEDLDTMLPKCDIVVVNTPL 183 (304)
Q Consensus 118 ~~vgIIG-~G~IG~~lA~~l~~~G~--~V~~~dr--~~~~~~~-~~~~--------g~~~~~~l~ell~~aDvVi~~~p~ 183 (304)
++|+|+| .|.+|+.++..|...|. ++..+|+ .....+. ..++ ......+..+.++++|+|+++...
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ag~ 80 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGI 80 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcCCC
Confidence 4899999 99999999998876564 6888998 4321111 1111 111111225679999999998753
Q ss_pred Chh---hh-cc------ccH---HHHhcCCCCCEEEEcCCCchhchHHHHHH--HHcCCceEE
Q 021995 184 TEK---TR-GM------FDK---DRIAKMKKGVLIVNNARGAIMDTQAVVDA--CSSGHIAGY 231 (304)
Q Consensus 184 ~~~---t~-~~------i~~---~~l~~mk~g~ilVn~~rg~~vd~~aL~~a--L~~g~i~ga 231 (304)
... ++ .+ +-. +.+....+++++++.+..-=+....+.+. +...++.|.
T Consensus 81 ~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv~~~~~~~~~~~~~p~~rviG~ 143 (303)
T 1o6z_A 81 PRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRHLYEAGDRSREQVIGF 143 (303)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHHHHHHHHHHSSSCGGGEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHcCCCHHHeeec
Confidence 221 00 00 111 22233467899999865433333333333 333455554
No 486
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=95.43 E-value=0.018 Score=53.51 Aligned_cols=87 Identities=17% Similarity=0.294 Sum_probs=51.3
Q ss_pred CEEEEEe-eChhhHHHHHHhccC-CCeEEEEc--CCCCChhHHHhc-------------Cceec-CCHHhhcCcCCEEEE
Q 021995 118 KTVGTVG-CGRIGKLLLQRLKPF-NCNLLYHD--RVKMDPQLEKET-------------GAKFE-EDLDTMLPKCDIVVV 179 (304)
Q Consensus 118 ~~vgIIG-~G~IG~~lA~~l~~~-G~~V~~~d--r~~~~~~~~~~~-------------g~~~~-~~l~ell~~aDvVi~ 179 (304)
.+|||+| +|.+|+.+.+.|... .+++.++. ++.........+ ..... .+.++ +.++|+|++
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~vDvVf~ 83 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDVDVVLS 83 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTCSEEEE
T ss_pred cEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCCCEEEE
Confidence 5899999 899999999998764 46776663 221111111111 11111 13344 478999999
Q ss_pred cCCCChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 180 NTPLTEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 180 ~~p~~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
|+|..... .+ -. ..++.|..+|+.+.
T Consensus 84 atp~~~s~-~~-a~---~~~~aG~~VId~s~ 109 (350)
T 2ep5_A 84 ALPNELAE-SI-EL---ELVKNGKIVVSNAS 109 (350)
T ss_dssp CCCHHHHH-HH-HH---HHHHTTCEEEECSS
T ss_pred CCChHHHH-HH-HH---HHHHCCCEEEECCc
Confidence 99843221 11 11 22356788888874
No 487
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=95.42 E-value=0.025 Score=51.93 Aligned_cols=93 Identities=15% Similarity=0.110 Sum_probs=58.5
Q ss_pred CEEEEEee-ChhhHHHHHHhccCCC-------eEEEEcCC----CCChhH-HH--hcC-------ceecCCHHhhcCcCC
Q 021995 118 KTVGTVGC-GRIGKLLLQRLKPFNC-------NLLYHDRV----KMDPQL-EK--ETG-------AKFEEDLDTMLPKCD 175 (304)
Q Consensus 118 ~~vgIIG~-G~IG~~lA~~l~~~G~-------~V~~~dr~----~~~~~~-~~--~~g-------~~~~~~l~ell~~aD 175 (304)
++|+|+|. |.+|+.++..|...|+ +|..+|+. ....+. .. ... +....++.+.+++||
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDAD 85 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCCC
Confidence 58999997 9999999999987775 79999986 211110 00 111 122367889999999
Q ss_pred EEEEcCCCChh---hh-cc------ccHH---HHhcC-CCCCEEEEcCC
Q 021995 176 IVVVNTPLTEK---TR-GM------FDKD---RIAKM-KKGVLIVNNAR 210 (304)
Q Consensus 176 vVi~~~p~~~~---t~-~~------i~~~---~l~~m-k~g~ilVn~~r 210 (304)
+|+.+...... ++ .+ +-.+ .+... +++++||+++.
T Consensus 86 ~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 86 VALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 99987643211 00 00 0111 22333 47889999984
No 488
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=95.40 E-value=0.018 Score=53.35 Aligned_cols=68 Identities=21% Similarity=0.160 Sum_probs=49.0
Q ss_pred cCCCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCcee-------cCCHHhhcCcCCEEEEcCC
Q 021995 115 LEGKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKF-------EEDLDTMLPKCDIVVVNTP 182 (304)
Q Consensus 115 L~g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-------~~~l~ell~~aDvVi~~~p 182 (304)
..+++|.|.|. |.||+.+++.|...|++|++.+|+..........++.. .++++++++++|+|+.+..
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~ 102 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA 102 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECce
Confidence 46789999997 99999999999989999999998754322111112221 1235677889999987764
No 489
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=95.39 E-value=0.031 Score=49.36 Aligned_cols=87 Identities=16% Similarity=0.197 Sum_probs=51.9
Q ss_pred CEEEEEee-ChhhHHHHHHhccC-CCeEE-EEcCCCCChhHHHhcCceecCCHHhhcC-cCCEEEEcCCCChhhhccccH
Q 021995 118 KTVGTVGC-GRIGKLLLQRLKPF-NCNLL-YHDRVKMDPQLEKETGAKFEEDLDTMLP-KCDIVVVNTPLTEKTRGMFDK 193 (304)
Q Consensus 118 ~~vgIIG~-G~IG~~lA~~l~~~-G~~V~-~~dr~~~~~~~~~~~g~~~~~~l~ell~-~aDvVi~~~p~~~~t~~~i~~ 193 (304)
.+|+|+|+ |.||+.+++.+... ++++. ++|+. +++++++. .+|+|+-+.+.. .+. .
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------~dl~~~~~~~~DvvIDfT~p~-a~~----~ 60 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------DPLSLLTDGNTEVVIDFTHPD-VVM----G 60 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---------------CCTHHHHHTTCCEEEECSCTT-THH----H
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---------------CCHHHHhccCCcEEEEccChH-HHH----H
Confidence 37999996 99999999998754 89976 55652 24555553 789988555322 111 1
Q ss_pred HHHhcCCCCCEEEEcCCCchhchHH-HHHHHH
Q 021995 194 DRIAKMKKGVLIVNNARGAIMDTQA-VVDACS 224 (304)
Q Consensus 194 ~~l~~mk~g~ilVn~~rg~~vd~~a-L~~aL~ 224 (304)
.....++.|.-+|-...|-..++.+ |.++.+
T Consensus 61 ~~~~a~~~g~~~VigTTG~~~e~~~~l~~aa~ 92 (245)
T 1p9l_A 61 NLEFLIDNGIHAVVGTTGFTAERFQQVESWLV 92 (245)
T ss_dssp HHHHHHHTTCEEEECCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEcCCCCCHHHHHHHHHHHH
Confidence 2222345566566656663333233 344444
No 490
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.39 E-value=0.015 Score=53.15 Aligned_cols=90 Identities=20% Similarity=0.176 Sum_probs=62.0
Q ss_pred CCCEEEEEeeChhhHHHHHHhcc-CCCeEEEEcCCCCChhHHHhcCceec-----CCHH----hhcC--cCCEEEEcCCC
Q 021995 116 EGKTVGTVGCGRIGKLLLQRLKP-FNCNLLYHDRVKMDPQLEKETGAKFE-----EDLD----TMLP--KCDIVVVNTPL 183 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~lA~~l~~-~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~----ell~--~aDvVi~~~p~ 183 (304)
.|++|.|+|.|.+|...++.++. .|.+|++.++++.+.+.+++.|...+ .++. ++.. ..|+++.+...
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~~~ 242 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCAVA 242 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECCSC
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEeccC
Confidence 58899999999999999999984 58899999987766677777775421 2222 2222 34666666543
Q ss_pred ChhhhccccHHHHhcCCCCCEEEEcCC
Q 021995 184 TEKTRGMFDKDRIAKMKKGVLIVNNAR 210 (304)
Q Consensus 184 ~~~t~~~i~~~~l~~mk~g~ilVn~~r 210 (304)
.+. -...++.++++..++.++-
T Consensus 243 ~~~-----~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 243 RIA-----FEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp HHH-----HHHHHHTEEEEEEEEECCC
T ss_pred cch-----hheeheeecCCceEEEEec
Confidence 222 1456677888888877764
No 491
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=95.36 E-value=0.018 Score=51.48 Aligned_cols=65 Identities=18% Similarity=0.202 Sum_probs=46.8
Q ss_pred CCEEEEEe-eChhhHHHHHHhccCCCeEEEEcCCCCChhHHHh-----cCceecCCHHhhcCcCCEEEEcCCC
Q 021995 117 GKTVGTVG-CGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKE-----TGAKFEEDLDTMLPKCDIVVVNTPL 183 (304)
Q Consensus 117 g~~vgIIG-~G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~-----~g~~~~~~l~ell~~aDvVi~~~p~ 183 (304)
+++|.|.| .|.||+.+++.|...|++|++.+|++...+ ... .... .+++.++++++|+|+.+...
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-INDYEYRVSDYT-LEDLINQLNDVDAVVHLAAT 72 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------CCEEEECCCC-HHHHHHHTTTCSEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CCceEEEEcccc-HHHHHHhhcCCCEEEEcccc
Confidence 47899999 699999999999999999999999743222 111 1112 23567788999999877653
No 492
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=95.35 E-value=0.012 Score=52.78 Aligned_cols=67 Identities=24% Similarity=0.381 Sum_probs=47.4
Q ss_pred CCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCC-CC--hhHH------HhcCcee-------cCCHHhhcCcCCEEEE
Q 021995 117 GKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVK-MD--PQLE------KETGAKF-------EEDLDTMLPKCDIVVV 179 (304)
Q Consensus 117 g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~-~~--~~~~------~~~g~~~-------~~~l~ell~~aDvVi~ 179 (304)
.++|.|.|. |.+|+.+++.|...|++|.+.+|+. .. .+.. ...+++. .+++.++++++|+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~ 83 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS 83 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 468999995 9999999999998999999999875 21 1111 1223321 1345678888999988
Q ss_pred cCCC
Q 021995 180 NTPL 183 (304)
Q Consensus 180 ~~p~ 183 (304)
+...
T Consensus 84 ~a~~ 87 (321)
T 3c1o_A 84 ALPF 87 (321)
T ss_dssp CCCG
T ss_pred CCCc
Confidence 7753
No 493
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=95.33 E-value=0.033 Score=50.93 Aligned_cols=101 Identities=24% Similarity=0.342 Sum_probs=61.1
Q ss_pred CEEEEEe-eChhhHHHHHHhcc---CCCeEEEEcCCCCChhHHHhc---Cc--eec----CCHHhhcCcCCEEEEcCCCC
Q 021995 118 KTVGTVG-CGRIGKLLLQRLKP---FNCNLLYHDRVKMDPQLEKET---GA--KFE----EDLDTMLPKCDIVVVNTPLT 184 (304)
Q Consensus 118 ~~vgIIG-~G~IG~~lA~~l~~---~G~~V~~~dr~~~~~~~~~~~---g~--~~~----~~l~ell~~aDvVi~~~p~~ 184 (304)
++|+|+| .|.+|..++..|.. +..++..+|........+.++ .. ... .+..+.+++||+|+++.+..
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~~ 80 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVA 80 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCCC
Confidence 4899999 89999999998853 556899999865211111111 11 111 24567899999999987532
Q ss_pred hh---hh-ccc--cHH-------HHhcCCCCCEEEEcCCCchhchHHHH
Q 021995 185 EK---TR-GMF--DKD-------RIAKMKKGVLIVNNARGAIMDTQAVV 220 (304)
Q Consensus 185 ~~---t~-~~i--~~~-------~l~~mk~g~ilVn~~rg~~vd~~aL~ 220 (304)
.. ++ .++ |.. .+....|++++++++. .+|.-..+
T Consensus 81 rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN--Pvd~~t~~ 127 (312)
T 3hhp_A 81 RKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN--PVNTTVAI 127 (312)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS--CHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC--cchhHHHH
Confidence 11 11 111 111 2233367899999964 44544443
No 494
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.30 E-value=0.013 Score=50.19 Aligned_cols=68 Identities=19% Similarity=0.150 Sum_probs=48.0
Q ss_pred cCCCEEEEEe-eChhhHHHHHHhccC--CCeEEEEcCCCCChhHHHhcCce-------ecCCHHhhcCcCCEEEEcCCC
Q 021995 115 LEGKTVGTVG-CGRIGKLLLQRLKPF--NCNLLYHDRVKMDPQLEKETGAK-------FEEDLDTMLPKCDIVVVNTPL 183 (304)
Q Consensus 115 L~g~~vgIIG-~G~IG~~lA~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~-------~~~~l~ell~~aDvVi~~~p~ 183 (304)
..+++|.|.| .|.||+.+++.|... |++|++.+|++.+.+.. ..++. ..+++++++++.|+|+.+...
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 79 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTSA 79 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence 3578999999 699999999999988 89999999864221111 11111 113456788899999887653
No 495
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.29 E-value=0.019 Score=57.09 Aligned_cols=74 Identities=14% Similarity=0.176 Sum_probs=52.3
Q ss_pred cEEEEcCCC-ChhHHHHHHHHHHHHHHhCcchhhHHHHhCCcccccccccccccCCCEEEEEeeChhhHHHHHHhccCCC
Q 021995 63 LTVAEVTGS-NVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNC 141 (304)
Q Consensus 63 I~v~n~~g~-~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~L~g~~vgIIG~G~IG~~lA~~l~~~G~ 141 (304)
-...+-... .....||.+.-+-|.+.|- .-|... ....|.+++|.|||+|.+|..+|+.|...|.
T Consensus 285 ~~~~~l~~~~dp~~la~~~~~Lnlklm~w----------Rllp~~----g~ekL~~arVLIVGaGGLGs~vA~~La~aGV 350 (615)
T 4gsl_A 285 PRVVDLSSLLDPLKIADQSVDLNLKLMKW----------RILPDL----NLDIIKNTKVLLLGAGTLGCYVSRALIAWGV 350 (615)
T ss_dssp CEEEECHHHHCHHHHHHHHHHHHHHHHHH----------HTCTTC----CHHHHHTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred eeEEeccccCCHHHHHhhhhhhhhHHHHH----------hhcchh----hHHHHhCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 455554443 5667888888777777651 011111 1136899999999999999999999999897
Q ss_pred -eEEEEcCCC
Q 021995 142 -NLLYHDRVK 150 (304)
Q Consensus 142 -~V~~~dr~~ 150 (304)
+++.+|...
T Consensus 351 G~ItLvD~D~ 360 (615)
T 4gsl_A 351 RKITFVDNGT 360 (615)
T ss_dssp CEEEEECCCB
T ss_pred CEEEEEcCCC
Confidence 488888753
No 496
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=95.28 E-value=0.0078 Score=52.87 Aligned_cols=37 Identities=22% Similarity=0.336 Sum_probs=33.5
Q ss_pred ccCCCEEEEEee---ChhhHHHHHHhccCCCeEEEEcCCC
Q 021995 114 DLEGKTVGTVGC---GRIGKLLLQRLKPFNCNLLYHDRVK 150 (304)
Q Consensus 114 ~L~g~~vgIIG~---G~IG~~lA~~l~~~G~~V~~~dr~~ 150 (304)
.+.||++.|.|. |.||+.+++.|...|++|++.+|+.
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 44 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE 44 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCG
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCH
Confidence 578999999997 6999999999999999999999865
No 497
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=95.28 E-value=0.014 Score=52.17 Aligned_cols=65 Identities=11% Similarity=0.178 Sum_probs=39.8
Q ss_pred CCEEEEEee-ChhhHHHHHHhccCCCeEEEEcCCCCChhHHHhcCceecCCHHhhcCc--CCEEEEcCC
Q 021995 117 GKTVGTVGC-GRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPK--CDIVVVNTP 182 (304)
Q Consensus 117 g~~vgIIG~-G~IG~~lA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~--aDvVi~~~p 182 (304)
+++|.|.|. |.||+.+++.|...|++|++.+|+..... .....+...+++++++++ .|+|+.+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 69 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPK-FEQVNLLDSNAVHHIIHDFQPHVIVHCAA 69 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-------------------CHHHHHHHCCSEEEECC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCC-eEEecCCCHHHHHHHHHhhCCCEEEECCc
Confidence 579999996 99999999999999999999997643211 111111122345566664 899987764
No 498
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=95.28 E-value=0.034 Score=51.35 Aligned_cols=30 Identities=27% Similarity=0.445 Sum_probs=25.0
Q ss_pred CEEEEEeeChhhHHHHHHhccC-CCeEEEEc
Q 021995 118 KTVGTVGCGRIGKLLLQRLKPF-NCNLLYHD 147 (304)
Q Consensus 118 ~~vgIIG~G~IG~~lA~~l~~~-G~~V~~~d 147 (304)
.+|||+|+|.||+.+++.|... +++|++.+
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~ 34 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVN 34 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEE
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEE
Confidence 3899999999999999998754 67877654
No 499
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=95.26 E-value=0.083 Score=46.71 Aligned_cols=39 Identities=15% Similarity=0.092 Sum_probs=33.8
Q ss_pred ccccCCCEEEEEee-Ch--hhHHHHHHhccCCCeEEEEcCCC
Q 021995 112 AYDLEGKTVGTVGC-GR--IGKLLLQRLKPFNCNLLYHDRVK 150 (304)
Q Consensus 112 ~~~L~g~~vgIIG~-G~--IG~~lA~~l~~~G~~V~~~dr~~ 150 (304)
+..+.||++.|.|. |. ||+++|+.|...|++|++.+|+.
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 45789999999995 44 99999999999999999999865
No 500
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=95.23 E-value=0.021 Score=55.46 Aligned_cols=112 Identities=15% Similarity=0.128 Sum_probs=73.0
Q ss_pred CCCEEEEEeeChhhHH-HHHHhccCCCeEEEEcCCCCC-hhHHHhcCceecC-CHHhhcCcCCEEEEc--CCC-Chhhh-
Q 021995 116 EGKTVGTVGCGRIGKL-LLQRLKPFNCNLLYHDRVKMD-PQLEKETGAKFEE-DLDTMLPKCDIVVVN--TPL-TEKTR- 188 (304)
Q Consensus 116 ~g~~vgIIG~G~IG~~-lA~~l~~~G~~V~~~dr~~~~-~~~~~~~g~~~~~-~l~ell~~aDvVi~~--~p~-~~~t~- 188 (304)
..++|.|||.|.+|.+ +|+.|+..|++|.++|....+ .+..++.|+.... .-.+.+.++|+|+.. +|. +|...
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~~d~vV~Spgi~~~~p~~~~ 100 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVSTAISADNPEIVA 100 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEECTTSCTTCHHHHH
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEECCCCCCCCHHHHH
Confidence 3579999999999996 899999999999999976432 1234455765431 112346789999876 333 22211
Q ss_pred ------cccc-HHHHhc-CCCC-CEEEEcCCCchhchHHHHHHHHcCC
Q 021995 189 ------GMFD-KDRIAK-MKKG-VLIVNNARGAIMDTQAVVDACSSGH 227 (304)
Q Consensus 189 ------~~i~-~~~l~~-mk~g-~ilVn~~rg~~vd~~aL~~aL~~g~ 227 (304)
.++. .+++.. ++.. .+-|--+.|+.-...-+...|+...
T Consensus 101 a~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g 148 (494)
T 4hv4_A 101 AREARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAG 148 (494)
T ss_dssp HHHTTCCEEEHHHHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred HHHCCCCEEcHHHHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHhcC
Confidence 1222 234443 3432 4566666899888888888888755
Done!