BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021996
(304 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LMN8|WAK3_ARATH Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3
PE=2 SV=2
Length = 741
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 29 CRSYCGNITIDYPFAIQQGCGHPGFRDL-LFCV--NDFLMFHISSGSYRVLEIDYAYQSL 85
C+ CGN+TI+YPF I GC +PG + L CV L+F G +V I ++
Sbjct: 31 CKLKCGNVTIEYPFGISTGCYYPGDDNFNLTCVVEEKLLLF----GIIQVTNISHSGHVS 86
Query: 86 TLHDAHMSTCDNMVLGGKGNGFAVEQWRAPYFNPTADNVFMLIGCSAKSPL 136
L + S C + NG A+ F+ +++N F L+GC+A S L
Sbjct: 87 VLFE-RFSECYEQ--KNETNGTALGYQLGSSFSLSSNNKFTLVGCNALSLL 134
>sp|Q5BQ05|Y1838_ARATH Uncharacterized protein At1g18380 OS=Arabidopsis thaliana
GN=At1g18380 PE=2 SV=1
Length = 250
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 99/265 (37%), Gaps = 57/265 (21%)
Query: 21 TADIHINKCRSY---CGN-----ITIDYPF----AIQQGCGHPGFRDLLFCVND-FLMFH 67
+AD +CRS CG+ + YPF + CGH F+ L C D L
Sbjct: 23 SADQQYEECRSRNLTCGSGHRVFESTTYPFWGGFNKPKFCGHSSFK--LSCEGDQNLTLA 80
Query: 68 ISSGSYRVLEIDYAYQSLTLHDAHMSTCDNMVL-GGKGNGFAVEQWRAPYFNPTADNVFM 126
I + + RV+ S L D +S D+ +L GG N + + + + +
Sbjct: 81 IGNITLRVV-------SANLEDHKISVADDSLLDGGCLNIWNFNGKNQFTLDSNTETIDV 133
Query: 127 LIGCSAKSPLFQGFPGQHLPCRNVSGMGCEDYYRCPSWSLVGRKRTAPMYGSGPPECCAV 186
+ CS +PL + CE+ Y P V R S E C +
Sbjct: 134 FVNCSGVAPL---------------QISCEESYEDPVTYHVLR-------SSDSDEGC-M 170
Query: 187 AFESIKMINLTKLECEGYASAYSLAPLKIDGPSEWSYGIRVKYSVQGGDQFCRACEATGG 246
+ I M+ K E + + A K G ++Y ++ D+ CR C +GG
Sbjct: 171 KYAEIPMLRSAKDELQRSELTFVEALRK---------GFDLRYIME--DKACRRCIDSGG 219
Query: 247 TCGFGTDGVRQLCMCGSVNSTSNCD 271
CG D C+C S+CD
Sbjct: 220 ICGSALDSESFRCLCADRPHNSSCD 244
>sp|Q39191|WAK1_ARATH Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1
PE=1 SV=2
Length = 735
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 4 LFLATFLFIFSASNPLTTADIHINKCRSYCGNITIDYPFAIQQGCGHPG 52
LFL F + + + C++ CGNITI+YPF I GC +PG
Sbjct: 7 LFLVAIFFSLACTQLVKGQHQPGENCQNKCGNITIEYPFGISSGCYYPG 55
>sp|Q9LMN7|WAK5_ARATH Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5
PE=2 SV=1
Length = 733
Score = 38.9 bits (89), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 1 MSTLFLATFLFIFSASNPLTTADIHINKCRSYCGNITIDYPFAIQQGCGHPG 52
+ +LFL +F + A L A + C++ CG++ IDYPF I GC +PG
Sbjct: 3 VHSLFLMA-IFFYLAYTQLVKAQPR-DDCQTRCGDVPIDYPFGISTGCYYPG 52
>sp|Q9LMN6|WAK4_ARATH Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4
PE=2 SV=1
Length = 738
Score = 38.1 bits (87), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 28 KCRSYCGNITIDYPFAIQQGC---GHPGFRDLLFCVNDFLMFHISSGSYRVLEIDYAYQS 84
+C CGN+T++YPF GC P F L CVN+ L + V+EI ++ Q
Sbjct: 27 RCPEKCGNVTLEYPFGFSPGCWRAEDPSFN--LSCVNENLFYK----GLEVVEISHSSQL 80
Query: 85 LTLHDA 90
L+ A
Sbjct: 81 RVLYPA 86
>sp|Q3ECH2|Y1670_ARATH Probable receptor-like protein kinase At1g67000 OS=Arabidopsis
thaliana GN=At1g67000 PE=2 SV=2
Length = 892
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 1 MSTLFLATFLFIFSASNPLTTADIHINKCRSY--CGNITIDYPF---AIQQGCGHPGFRD 55
+S+ + FLF P +++ + C S CGNIT D+PF + CGHP
Sbjct: 6 LSSYSILFFLFSLFHHLPCASSNQGLGWCESLFQCGNITADFPFWGGNRHKPCGHPLLE- 64
Query: 56 LLFCVNDFLM-FHISSGSYRVLEIDYAYQSLTLHDAHMSTCDNMVLGGKGNGFAVEQWRA 114
L C N+ + +IS+ + V +I+ +LTL + + LG + +A
Sbjct: 65 -LHCNNNNITSLYISNQEFYVRQINQTSNTLTLARSDL-------LGSFCSSYAYNTTTL 116
Query: 115 P----YFNPTADNVFMLIGCSAK 133
P +PT ++ +L C K
Sbjct: 117 PPEIFELSPTYKSLTVLYHCDPK 139
>sp|Q9LMP1|WAK2_ARATH Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2
PE=1 SV=1
Length = 732
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 28 KCRSYCGNITIDYPFAIQQGCGHPGFRDL-LFCVNDFLMFHISSGSYRVLEIDYAYQSLT 86
+C++ CGN+ ++YPF GC +PG L C +F G+ V+ + + Q L
Sbjct: 28 ECQTRCGNVAVEYPFGTSPGCYYPGDESFNLTCNEQEKLFF---GNMPVINMSLSGQ-LR 83
Query: 87 LHDAHMSTCDNMVLGGKGNGFAVEQWRAPYFNPTADNVFMLIGCSA 132
+ C + GK + ++ F + N F ++GC++
Sbjct: 84 VRLVRSRVCYDS--QGKQTDYIAQRTTLGNFTLSELNRFTVVGCNS 127
>sp|Q7UFZ2|YIDC_RHOBA Membrane protein insertase YidC OS=Rhodopirellula baltica (strain
SH1) GN=yidC PE=3 SV=1
Length = 827
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 19/81 (23%)
Query: 52 GFRDLLFCVNDFLMFHISSGSYRVLEIDY-----AYQSLTLHDAHMSTCDNM-------- 98
GF + C FL I G YR L +D A+ S T ++++ D M
Sbjct: 599 GFNPMAGCAPMFLQLPIFIGLYRTLSVDIELRQAAFASWTTWASNLAAPDMMYYWGDWMW 658
Query: 99 -VLGGKGNGFAVEQWRAPYFN 118
LGG+G G W PYFN
Sbjct: 659 DYLGGRGTG-----WLGPYFN 674
>sp|Q9LN59|WAKLK_ARATH Putative wall-associated receptor kinase-like 11 OS=Arabidopsis
thaliana GN=WAKL11 PE=3 SV=2
Length = 788
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 80/211 (37%), Gaps = 39/211 (18%)
Query: 28 KCRSYCGNITIDYPFAIQQGCGHPGFRDLLFCVNDFLMFHISSGSYRV---LEIDYAYQS 84
+ +S CGNI I YPF I++GC + + C N F G V L D Y +
Sbjct: 33 QSKSVCGNINIPYPFGIEKGCYLNEWYKIE-CKNATYPFLFKMGMAVVNISLPGDDGYNN 91
Query: 85 LTLHDAHMSTCDNMVLG----GKGNGFAVEQWRAPYFNPTADNVFMLIGCSAKSPLFQGF 140
+ + +G GK +G + +P++ N + +GC++K+ L
Sbjct: 92 PVSYGSIRVKIPITSIGCSRDGKESGSVLNFTDSPFYFGIG-NSLVAVGCNSKASLTNIN 150
Query: 141 PG------------QHLPCRNV---SGMGCEDYYRCPSWSLVGRKRT------------- 172
P + LP +++ GC + + P +S + K
Sbjct: 151 PSKVGCELNCTASKETLPSKSIPFFDKTGCSN-NKLPYYSSLCTKNNGEDERSCDGNGCC 209
Query: 173 -APMYGSGPPECCAVAFESIKMINLTKLECE 202
A + S P+ + ES N TKLEC
Sbjct: 210 IAGLLDSEAPQVIGINIESFDHGNSTKLECR 240
>sp|Q9SA25|WAKLG_ARATH Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana
GN=WAKL8 PE=2 SV=1
Length = 720
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 20 TTADIHINKCRSYCGNITIDYPFAIQQGC 48
+T + + C +CGN+++ YPF I +GC
Sbjct: 24 STFPLALRNCSDHCGNVSVPYPFGIGKGC 52
>sp|Q8S8N4|Y2685_ARATH Probably inactive receptor-like protein kinase At2g46850
OS=Arabidopsis thaliana GN=At2g46850 PE=3 SV=1
Length = 633
Score = 32.0 bits (71), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 33 CGNITIDYPFAIQQGCGHPGFRDLLFCVNDFLMF-HISSGSYRVLE 77
CGN ++ +PF + FR L C N +F HI+ SYR++E
Sbjct: 43 CGNFSVSFPFQLSSSSSAAAFR--LSCENSSTLFLHINHQSYRIIE 86
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.458
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,970,898
Number of Sequences: 539616
Number of extensions: 5380146
Number of successful extensions: 10631
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 10618
Number of HSP's gapped (non-prelim): 20
length of query: 304
length of database: 191,569,459
effective HSP length: 117
effective length of query: 187
effective length of database: 128,434,387
effective search space: 24017230369
effective search space used: 24017230369
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 61 (28.1 bits)