BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021997
(304 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 100/237 (42%), Gaps = 66/237 (27%)
Query: 89 RCAHFAIFDGHGGRLAAEYAQ--------------------------------------- 109
+C+ FA++DGHGG A+Y
Sbjct: 50 QCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQEKVI 109
Query: 110 ---KRLHANVISAGLPRGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHL 166
K L + + G G TAV + G+ ++VAN GD++ VV R+
Sbjct: 110 EELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNG--------- 160
Query: 167 DELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFK----- 221
KA+ ++ HK E RI+K+GG V+ +GR+ G L +SRA GD +K
Sbjct: 161 ------KALEMSFDHKPEDTVEYQRIEKAGGRVTLDGRVNGGLNLSRAIGDHGYKMNKSL 214
Query: 222 ---KFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQ-KLLKEGLSVT 274
+ + A PDI V D F++L CDG+W V+FVQ ++ K G+ ++
Sbjct: 215 PAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQERINKPGMKLS 271
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 95/220 (43%), Gaps = 60/220 (27%)
Query: 93 FAIFDGHGGRLAAEYAQKRLHANVI-------SAGLPR----------GW---------- 125
FA++DGH G A+Y + L ++ SAG P G+
Sbjct: 56 FAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVM 115
Query: 126 --------QDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVV 177
+ G+TAV + I + + N GD++ ++ R+ K
Sbjct: 116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------------KVHFF 160
Query: 178 TRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATP 229
T+ HK P E+ RIQ +GG+V R+ G L VSRA GD +K V P
Sbjct: 161 TQDHKPSNPLEKERIQNAGGSVMIQ-RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEP 219
Query: 230 DIHSFEVTERD-HFIILGCDGLWGVFGPSDAVEFVQKLLK 268
++H E +E D FIIL CDG+W V G + +FV+ L+
Sbjct: 220 EVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLE 259
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 95/220 (43%), Gaps = 60/220 (27%)
Query: 93 FAIFDGHGGRLAAEYAQKRLHANVI-------SAGLPR----------GW---------- 125
FA++DGH G A+Y + L ++ SAG P G+
Sbjct: 56 FAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVM 115
Query: 126 --------QDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVV 177
+ G+TAV + I + + N GD++ ++ R+ K
Sbjct: 116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------------KVHFF 160
Query: 178 TRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATP 229
T+ HK P E+ RIQ +GG+V R+ G L VSRA GD +K V P
Sbjct: 161 TQDHKPSNPLEKERIQNAGGSVMIQ-RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEP 219
Query: 230 DIHSFEVTERD-HFIILGCDGLWGVFGPSDAVEFVQKLLK 268
++H E +E D FIIL CDG+W V G + +FV+ L+
Sbjct: 220 EVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLE 259
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 64/224 (28%)
Query: 93 FAIFDGHGGRLAAEYAQKRLHANV----------------------ISAGLPRGW----- 125
FA++DGH G A Y L ++ + G+ G+
Sbjct: 58 FAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDE 117
Query: 126 -------------QDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSL 172
+ G+TAV + I + ++ N GD++AV+ R+
Sbjct: 118 YMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNG--------------- 162
Query: 173 KAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG-------- 224
+ T+ HK P+E+ RIQ +GG+V R+ G L VSRA GD +K
Sbjct: 163 QVCFSTQDHKPCNPREKERIQNAGGSVMIQ-RVNGSLAVSRALGDYDYKCVDGKGPTEQL 221
Query: 225 VVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLK 268
V P+++ E D FIIL DG+W V + E+V+ L+
Sbjct: 222 VSPEPEVYEILRAEEDEFIILAXDGIWDVMSNEELCEYVKSRLE 265
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 90/217 (41%), Gaps = 53/217 (24%)
Query: 86 PNLRCAHFAIFDGHGGRLAAEYAQKRLHANV---ISAGLPR-----GWQD---------- 127
P+L F ++DGHGG A Y ++R+H + I P WQ+
Sbjct: 55 PHLSAHFFGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSF 114
Query: 128 -----------------GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELS 170
G+T+V + +FVAN GD++AV+ R
Sbjct: 115 MRVDSEIETVAHAPETVGSTSVVAVVFPTHIFVANCGDSRAVLCRGKT------------ 162
Query: 171 SLKAIVVTRVHKAIYPQERARIQKSGGTV--SSNGRLQGRLEVSRAFGDRQFKKFGVVAT 228
+ ++ HK E ARI+ +GG V + R+ G L +SR+ GDR K V+
Sbjct: 163 ---PLALSVDHKPDRDDEAARIEAAGGKVIRWNGARVFGVLAMSRSIGDRYLKP-SVIPD 218
Query: 229 PDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 265
P++ S + D +IL DGLW V + + +K
Sbjct: 219 PEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLARK 255
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 51/208 (24%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH---ANVISAGLP---------RGWQD------------- 127
F ++DGHGG A Y ++R+H A I+ P W+
Sbjct: 58 FGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEI 117
Query: 128 --------GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTR 179
G+T+V + +FVAN GD++AV+ R A+ ++
Sbjct: 118 ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKT---------------ALPLSV 162
Query: 180 VHKAIYPQERARIQKSGGTV-SSNG-RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVT 237
HK E ARI+ +GG V NG R+ G L +SR+ GDR K ++ P++ + +
Sbjct: 163 DHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKP-SIIPDPEVTAVKRV 221
Query: 238 ERDHFIILGCDGLWGVFGPSDAVEFVQK 265
+ D +IL DG+W V +A E +K
Sbjct: 222 KEDDCLILASDGVWDVMTDEEACEMARK 249
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 51/208 (24%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH---ANVISAGLP---------RGWQD------------- 127
F ++DGHGG A Y ++R+H A I+ P W+
Sbjct: 55 FGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEI 114
Query: 128 --------GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTR 179
G+T+V + +FVAN GD++AV+ R A+ ++
Sbjct: 115 ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKT---------------ALPLSV 159
Query: 180 VHKAIYPQERARIQKSGGTV-SSNG-RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVT 237
HK E ARI+ +GG V NG R+ G L +SR+ GDR K ++ P++ + +
Sbjct: 160 DHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKP-SIIPDPEVTAVKRV 218
Query: 238 ERDHFIILGCDGLWGVFGPSDAVEFVQK 265
+ D +IL DG+W V +A E +K
Sbjct: 219 KEDDCLILASDGVWDVMTDEEACEMARK 246
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 51/208 (24%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH---ANVISAGLP---------RGWQD------------- 127
F ++DGHGG A Y ++R+H A I+ P W+
Sbjct: 70 FGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEI 129
Query: 128 --------GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTR 179
G+T+V + +FVAN GD++AV+ R A+ ++
Sbjct: 130 ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKT---------------ALPLSV 174
Query: 180 VHKAIYPQERARIQKSGGTV-SSNG-RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVT 237
HK E ARI+ +GG V NG R+ G L +SR+ GDR K ++ P++ + +
Sbjct: 175 DHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKP-SIIPDPEVTAVKRV 233
Query: 238 ERDHFIILGCDGLWGVFGPSDAVEFVQK 265
+ D +IL DG+W V +A E +K
Sbjct: 234 KEDDCLILASDGVWDVMTDEEACEMARK 261
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 18/140 (12%)
Query: 128 GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQ 187
G+TAV + + V+N GD++AV+ R +A+ ++ HK
Sbjct: 158 GSTAVVALVCSSHIVVSNCGDSRAVLFRGK---------------EAMPLSVDHKPDRED 202
Query: 188 ERARIQKSGGTV--SSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIIL 245
E ARI+ +GG V R+ G L +SR+ GDR K + V+ P++ + D +IL
Sbjct: 203 EYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLIL 261
Query: 246 GCDGLWGVFGPSDAVEFVQK 265
DGLW V + E ++
Sbjct: 262 ASDGLWDVMNNQEVCEIARR 281
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 18/140 (12%)
Query: 128 GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQ 187
G+TAV + + V+N GD++AV+ R +A+ ++ HK
Sbjct: 165 GSTAVVALVCSSHIVVSNCGDSRAVLFRGK---------------EAMPLSVDHKPDRED 209
Query: 188 ERARIQKSGGTV--SSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIIL 245
E ARI+ +GG V R+ G L +SR+ GDR K + V+ P++ + D +IL
Sbjct: 210 EYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLIL 268
Query: 246 GCDGLWGVFGPSDAVEFVQK 265
DGLW V + E ++
Sbjct: 269 ASDGLWDVMNNQEVCEIARR 288
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 18/140 (12%)
Query: 128 GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQ 187
G+TAV + + V+N GD++AV+ R +A+ ++ HK
Sbjct: 141 GSTAVVALVCSSHIVVSNCGDSRAVLFRGK---------------EAMPLSVDHKPDRED 185
Query: 188 ERARIQKSGGTV--SSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIIL 245
E ARI+ +GG V R+ G L +SR+ GDR K + V+ P++ + D +IL
Sbjct: 186 EYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLIL 244
Query: 246 GCDGLWGVFGPSDAVEFVQK 265
DGLW V + E ++
Sbjct: 245 ASDGLWDVMNNQEVCEIARR 264
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 18/140 (12%)
Query: 128 GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQ 187
G+TAV + + V+N GD++AV+ R +A+ ++ HK
Sbjct: 155 GSTAVVALVCSSHIVVSNCGDSRAVLFRGK---------------EAMPLSVDHKPDRED 199
Query: 188 ERARIQKSGGTV--SSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIIL 245
E ARI+ +GG V R+ G L +SR+ GDR K + V+ P++ + D +IL
Sbjct: 200 EYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLIL 258
Query: 246 GCDGLWGVFGPSDAVEFVQK 265
DGLW V + E ++
Sbjct: 259 ASDGLWDVMNNQEVCEIARR 278
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 18/140 (12%)
Query: 128 GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQ 187
G+TAV + + V+N GD++AV+ R +A+ ++ HK
Sbjct: 152 GSTAVVALVCSSHIVVSNCGDSRAVLFRGK---------------EAMPLSVDHKPDRED 196
Query: 188 ERARIQKSGGTV--SSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIIL 245
E ARI+ +GG V R+ G L +SR+ GDR K + V+ P++ + D +IL
Sbjct: 197 EYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLIL 255
Query: 246 GCDGLWGVFGPSDAVEFVQK 265
DGLW V + E ++
Sbjct: 256 ASDGLWDVMNNQEVCEIARR 275
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 18/140 (12%)
Query: 128 GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQ 187
G+TAV + + V+N GD++AV+ R +A+ ++ HK
Sbjct: 156 GSTAVVALVCSSHIVVSNCGDSRAVLFRGK---------------EAMPLSVDHKPDRED 200
Query: 188 ERARIQKSGGTV--SSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIIL 245
E ARI+ +GG V R+ G L +SR+ GDR K + V+ P++ + D +IL
Sbjct: 201 EYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLIL 259
Query: 246 GCDGLWGVFGPSDAVEFVQK 265
DGLW V + E ++
Sbjct: 260 ASDGLWDVMNNQEVCEIARR 279
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 88/210 (41%), Gaps = 52/210 (24%)
Query: 92 HFAIFDGHGGRLAAEYAQKRLHANVISAGLPRG--------------------------- 124
+FA++DGHGG AA++ + ++ LP+
Sbjct: 151 YFAVYDGHGGPAAADFCHTHMEKCIMDL-LPKEKNLETLLTLAFLEIDKAFSSHARLSAD 209
Query: 125 ---WQDGATA-VCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRV 180
G TA V + G + VA++GD++A++ R K + +T
Sbjct: 210 ATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKG---------------KPMKLTID 254
Query: 181 HKAIYPQERARIQKSGGTVSSNG----RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEV 236
H E+ RI+K GG V+ N + GRL ++R+ GD K GV+A P+ ++
Sbjct: 255 HTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKL 314
Query: 237 TE-RDHFIILGCDGLWGVFGPSDAVEFVQK 265
D F++L DG+ + + +FV +
Sbjct: 315 HHADDSFLVLTTDGINFMVNSQEICDFVNQ 344
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 101/275 (36%), Gaps = 68/275 (24%)
Query: 90 CAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRGWQD---------GATAV---CIWIL 137
CA F +FDG G A+E + + +IS+ WQ+ AT V +L
Sbjct: 53 CAFFGVFDGTVGDFASENVKDLVVPQLISSP---AWQEVTEXLRSDVPATEVDEKLPQLL 109
Query: 138 GRTVF--------------------VANIGDAKAVVARSSIVDGSNNHL---------DE 168
+ V A+ AV+A+ + G HL +
Sbjct: 110 DQAVDDXYKNADNELVKXCEQLNKDYASSTSVTAVLAKGFVAVG---HLGDSRIAXGVET 166
Query: 169 LSSLKAIVVTRVHKAIYPQERARIQKSGGTVS--------------------SNGRLQGR 208
+ L +T HK P E+ RI ++GG+V S G +
Sbjct: 167 PNGLNCEFLTVDHKPDXPHEKLRIXRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPXQ 226
Query: 209 LEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLK 268
L+ SRAFG + K +G+ PD+ VT + IL DGLW V + AVE + +
Sbjct: 227 LQYSRAFGGKDLKXYGLSNQPDVRVVRVTPQHRVXILATDGLWDVXSAAQAVEIAXQARQ 286
Query: 269 EGLS-VTXXXXXXXXXXXXXXXCKDNCTAIVIIFR 302
EG + DN TA + F+
Sbjct: 287 EGRNPAQALVEXTLAEQQSRNQSADNITAXTVFFK 321
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 88/210 (41%), Gaps = 52/210 (24%)
Query: 92 HFAIFDGHGGRLAAEYAQKRLHANVISAGLPRG--------------------------- 124
+FA++DGHGG AA++ + ++ LP+
Sbjct: 37 YFAVYDGHGGPAAADFCHTHMEKCIMDL-LPKEKNLETLLTLAFLEIDKAFSSHARLSAD 95
Query: 125 ---WQDGATA-VCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRV 180
G TA V + G + VA++GD++A++ R K + +T
Sbjct: 96 ATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKG---------------KPMKLTID 140
Query: 181 HKAIYPQERARIQKSGGTVSSNG----RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEV 236
H E+ RI+K GG V+ N + GRL ++R+ GD K GV+A P+ ++
Sbjct: 141 HTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKL 200
Query: 237 TER-DHFIILGCDGLWGVFGPSDAVEFVQK 265
D F++L DG+ + + +FV +
Sbjct: 201 HHADDSFLVLTTDGINFMVNSQEICDFVNQ 230
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 25/121 (20%)
Query: 141 VFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVS 200
V NIGD++A + S DG L ++ HK +P E +RI+K+GG+V
Sbjct: 175 VTAINIGDSRATLIHS---DGGLTRL-----------SKDHKPNHPTEASRIEKAGGSVE 220
Query: 201 S--NGRLQGRLEVSRAFGDRQFK--------KFGVVATPDIHSFEVTERDHFIILGCDGL 250
+ R+ G L +SRAFGD FK + V+A PD+ F ++L CDG+
Sbjct: 221 TFDVPRVDGVLALSRAFGDSDFKXNPNLPPEEQKVIAVPDVRQF-YALSSDLLLLACDGV 279
Query: 251 W 251
+
Sbjct: 280 Y 280
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 68/177 (38%), Gaps = 47/177 (26%)
Query: 128 GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQ 187
GATA + G + VAN GD++A++ +E S A+ ++ H A +
Sbjct: 200 GATACVAHVDGVDLHVANTGDSRAMLGVQ----------EEDGSWSAVTLSNDHNAQNER 249
Query: 188 ERARIQ-----KSGGTVSSNGRLQGRLEVSRAFGDRQFK--------------------- 221
E R++ +V RL G L RAFGD +FK
Sbjct: 250 ELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNE 309
Query: 222 --KF---------GVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLL 267
KF + A P++ + +D F++L DGLW D V V + L
Sbjct: 310 YTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYL 366
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 68/177 (38%), Gaps = 47/177 (26%)
Query: 128 GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQ 187
GATA + G + VAN GD++A++ +E S A+ ++ H A +
Sbjct: 200 GATACVAHVDGVDLHVANTGDSRAMLGVQ----------EEDGSWSAVTLSNDHNAQNER 249
Query: 188 ERARIQ-----KSGGTVSSNGRLQGRLEVSRAFGDRQFK--------------------- 221
E R++ +V RL G L RAFGD +FK
Sbjct: 250 EVERLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNE 309
Query: 222 --KF---------GVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLL 267
KF + A P++ + +D F++L DGLW D V V + L
Sbjct: 310 YTKFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYL 366
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|B Chain B, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|C Chain C, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|D Chain D, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
Length = 377
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 27/126 (21%)
Query: 140 TVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGG-- 197
T+ VA++G+++ V+ S AI ++ H A +ER R+Q +GG
Sbjct: 167 TIHVASLGNSRCVLK---------------SGRTAIHLSTPHTASSHKERHRVQAAGGVF 211
Query: 198 -TVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERDHFIILGCD 248
TV+ L G + +RAFG FKK G V A PD+ +F D I+ G
Sbjct: 212 TTVNGELLLGGVVPXTRAFGSFDFKKGGQGKLQQDLVSAVPDVTTFFAYPGDD-IVAGTA 270
Query: 249 GLWGVF 254
G + F
Sbjct: 271 GAFAHF 276
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 35/161 (21%)
Query: 121 LPRGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRV 180
L R GA AV +L ++VAN+G +A++ +S+ VDG L+ +
Sbjct: 160 LEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKST-VDG----------LQVTQLNVD 208
Query: 181 HKAIYPQERARIQKSG---GTVSSNGRLQGRLEVSRAFGDRQFKKFG------------- 224
H E R+ + G G + G + G+ E +R GD + K+G
Sbjct: 209 HTTENEDELFRLSQLGLDAGKIKQVGIICGQ-ESTRRIGDYKV-KYGYTDIDLLSAAKSK 266
Query: 225 -VVATPDIHSFEVTER-DHFIILGCDGLWGVF----GPSDA 259
++A P+IH + + F++L +GL+ GP A
Sbjct: 267 PIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQA 307
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 34.3 bits (77), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 35/161 (21%)
Query: 121 LPRGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRV 180
L R GA AV +L ++VAN+G +A++ +S+ VDG L+ +
Sbjct: 141 LEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKST-VDG----------LQVTQLNVD 189
Query: 181 HKAIYPQERARIQKSG---GTVSSNGRLQGRLEVSRAFGDRQFKKFG------------- 224
H E R+ + G G + G + G+ E +R GD + K+G
Sbjct: 190 HTTENEDELFRLSQLGLDAGKIKQVGIICGQ-ESTRRIGDYKV-KYGYTDIDLLSAAKSK 247
Query: 225 -VVATPDIHSFEVTER-DHFIILGCDGLWGVF----GPSDA 259
++A P+IH + + F++L +GL+ GP A
Sbjct: 248 PIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQA 288
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 35/161 (21%)
Query: 121 LPRGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRV 180
L R GA AV +L ++VAN+G +A++ +S+ VDG L+ +
Sbjct: 158 LEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKST-VDG----------LQVTQLNVD 206
Query: 181 HKAIYPQERARIQKSG---GTVSSNGRLQGRLEVSRAFGDRQFKKFG------------- 224
H E R+ + G G + G + G+ E +R GD + K+G
Sbjct: 207 HTTENEDELFRLSQLGLDAGKIKQVGIICGQ-ESTRRIGDYKV-KYGYTDIDLLSAAKSK 264
Query: 225 -VVATPDIHSFEVTER-DHFIILGCDGLWGVF----GPSDA 259
++A P+IH + + F++L +GL+ GP A
Sbjct: 265 PIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQA 305
>pdb|1YEN|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betap36a Oxy (2mm Ihp, 20% Peg) (10 Test Sets)
pdb|1YEN|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betap36a Oxy (2mm Ihp, 20% Peg) (10 Test Sets)
pdb|1Y45|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betap36a Deoxy Low-Salt (10 Test Sets)
pdb|1Y45|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betap36a Deoxy Low-Salt (10 Test Sets)
Length = 146
Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 184 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 230
+ P+E++ + G V+ + G GRL V A+ R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYAWTQRFFESFGDLSTPD 52
>pdb|1NQP|B Chain B, Crystal Structure Of Human Hemoglobin E At 1.73 A
Resolution
pdb|1NQP|D Chain D, Crystal Structure Of Human Hemoglobin E At 1.73 A
Resolution
pdb|1YVQ|B Chain B, The Low Salt (Peg) Crystal Structure Of Co Hemoglobin E
(Betae26k) Approaching Physiological Ph (Ph 7.5)
pdb|1YVQ|D Chain D, The Low Salt (Peg) Crystal Structure Of Co Hemoglobin E
(Betae26k) Approaching Physiological Ph (Ph 7.5)
pdb|1YVT|B Chain B, The High Salt (Phosphate) Crystal Structure Of Co
Hemoglobin E (Glu26lys) At Physiological Ph (Ph 7.35)
pdb|3DUT|B Chain B, The High Salt (Phosphate) Crystal Structure Of Deoxy
Hemoglobin E (Glu26lys) At Physiological Ph (Ph 7.35)
pdb|3DUT|D Chain D, The High Salt (Phosphate) Crystal Structure Of Deoxy
Hemoglobin E (Glu26lys) At Physiological Ph (Ph 7.35)
Length = 146
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 184 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 230
+ P+E++ + G V+ + G+ GRL V + R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGKALGRLLVVYPWTQRFFESFGDLSTPD 52
>pdb|1A00|B Chain B, Hemoglobin (Val Beta1 Met, Trp Beta37 Tyr) Mutant
pdb|1A00|D Chain D, Hemoglobin (Val Beta1 Met, Trp Beta37 Tyr) Mutant
pdb|1YEQ|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betaw37y Oxy (10 Test Sets)
pdb|1YEQ|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betaw37y Oxy (10 Test Sets)
pdb|1Y46|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betaw37y Deoxy Low-Salt (10 Test Sets)
pdb|1Y46|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betaw37y Deoxy Low-Salt (10 Test Sets)
Length = 146
Score = 30.8 bits (68), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 184 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 230
+ P+E++ + G V+ + G GRL V + R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPYTQRFFESFGDLSTPD 52
>pdb|1Y2Z|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betav34g Deoxy Low-Salt (1 Test Set)
pdb|1Y2Z|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betav34g Deoxy Low-Salt (1 Test Set)
Length = 146
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 184 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 230
+ P+E++ + G V+ + G GRL V + R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGEALGRLLVGYPWTQRFFESFGDLSTPD 52
>pdb|1QI8|B Chain B, Deoxygenated Structure Of A Distal Pocket Hemoglobin
Mutant
pdb|1QI8|D Chain D, Deoxygenated Structure Of A Distal Pocket Hemoglobin
Mutant
pdb|1J7W|B Chain B, Crystal Structure Of Deoxy Hbbetayq, A Site Directed
Mutant Of Hba
pdb|1J7W|D Chain D, Crystal Structure Of Deoxy Hbbetayq, A Site Directed
Mutant Of Hba
pdb|1J7Y|B Chain B, Crystal Structure Of Partially Ligated Mutant Of Hba
pdb|1J7Y|D Chain D, Crystal Structure Of Partially Ligated Mutant Of Hba
pdb|2W72|B Chain B, Deoxygenated Structure Of A Distal Site Hemoglobin Mutant
Plus Xe
pdb|2W72|D Chain D, Deoxygenated Structure Of A Distal Site Hemoglobin Mutant
Plus Xe
Length = 146
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 184 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 230
+ P+E++ + G V+ + G GRL V + R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGEAYGRLLVVYPWTQRFFESFGDLSTPD 52
>pdb|1YE1|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betay35a Oxy (2mm Ihp, 20% Peg) (1 Test Set)
pdb|1YE1|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betay35a Oxy (2mm Ihp, 20% Peg) (1 Test Set)
pdb|1Y31|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betay35a Deoxy Low-Salt (1 Test Set)
pdb|1Y31|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betay35a Deoxy Low-Salt (1 Test Set)
Length = 146
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 184 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 230
+ P+E++ + G V+ + G GRL V + R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGEALGRLLVVAPWTQRFFESFGDLSTPD 52
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,879,632
Number of Sequences: 62578
Number of extensions: 285964
Number of successful extensions: 728
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 655
Number of HSP's gapped (non-prelim): 53
length of query: 304
length of database: 14,973,337
effective HSP length: 98
effective length of query: 206
effective length of database: 8,840,693
effective search space: 1821182758
effective search space used: 1821182758
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)