Query 021999
Match_columns 304
No_of_seqs 327 out of 2059
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 12:29:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021999.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021999hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hdj_A Human HSP40, HDJ-1; mol 99.8 2E-20 6.9E-25 140.3 8.1 70 25-94 2-71 (77)
2 2cug_A Mkiaa0962 protein; DNAJ 99.8 1.5E-20 5.1E-25 144.7 5.6 75 19-93 10-84 (88)
3 2ctp_A DNAJ homolog subfamily 99.8 2.9E-20 9.8E-25 139.8 6.5 71 23-93 4-74 (78)
4 2ctw_A DNAJ homolog subfamily 99.8 6.5E-20 2.2E-24 146.7 7.6 78 19-96 10-88 (109)
5 2ctr_A DNAJ homolog subfamily 99.8 7.3E-20 2.5E-24 140.8 7.5 72 23-94 4-75 (88)
6 2dn9_A DNAJ homolog subfamily 99.8 9.1E-20 3.1E-24 137.3 7.0 71 23-93 4-75 (79)
7 2och_A Hypothetical protein DN 99.8 1.4E-19 4.9E-24 134.3 7.4 67 24-92 6-72 (73)
8 2ej7_A HCG3 gene; HCG3 protein 99.8 1.5E-19 5.2E-24 137.0 6.7 70 24-93 7-78 (82)
9 2ctq_A DNAJ homolog subfamily 99.8 1.9E-19 6.6E-24 144.6 7.5 77 18-94 9-89 (112)
10 2yua_A Williams-beuren syndrom 99.8 2.2E-19 7.5E-24 141.1 7.6 73 23-95 14-87 (99)
11 1wjz_A 1700030A21RIK protein; 99.8 1.4E-19 4.7E-24 140.6 5.8 71 23-93 13-90 (94)
12 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 2.7E-19 9.3E-24 142.9 6.1 89 22-118 11-104 (109)
13 1bq0_A DNAJ, HSP40; chaperone, 99.8 5.4E-20 1.9E-24 145.6 1.7 72 25-96 2-74 (103)
14 2lgw_A DNAJ homolog subfamily 99.8 4.8E-19 1.6E-23 139.3 7.1 72 26-97 2-75 (99)
15 2o37_A Protein SIS1; HSP40, J- 99.8 9E-19 3.1E-23 135.8 7.8 71 24-96 6-76 (92)
16 2dmx_A DNAJ homolog subfamily 99.8 6.6E-19 2.3E-23 136.5 6.3 70 24-93 7-78 (92)
17 2ys8_A RAB-related GTP-binding 99.8 9.2E-19 3.1E-23 135.3 6.5 73 12-86 15-87 (90)
18 2l6l_A DNAJ homolog subfamily 99.7 1.9E-17 6.4E-22 140.1 8.1 71 23-93 7-84 (155)
19 3apq_A DNAJ homolog subfamily 99.7 2.5E-17 8.4E-22 144.4 6.7 70 26-95 2-72 (210)
20 3lz8_A Putative chaperone DNAJ 99.7 5E-18 1.7E-22 160.0 0.0 71 23-93 25-95 (329)
21 3hho_A CO-chaperone protein HS 99.7 6.2E-17 2.1E-21 139.6 6.2 67 25-91 3-77 (174)
22 1fpo_A HSC20, chaperone protei 99.6 1.2E-16 4E-21 137.5 5.2 65 27-91 2-74 (171)
23 1gh6_A Large T antigen; tumor 99.6 1.2E-17 4.2E-22 134.4 -2.4 63 26-91 8-72 (114)
24 3bvo_A CO-chaperone protein HS 99.6 7E-16 2.4E-20 136.5 6.1 67 25-91 42-116 (207)
25 2pf4_E Small T antigen; PP2A, 99.6 7.6E-17 2.6E-21 138.6 -0.2 64 26-92 11-76 (174)
26 1iur_A KIAA0730 protein; DNAJ 99.6 1.7E-16 6E-21 122.0 1.5 62 23-84 13-76 (88)
27 1faf_A Large T antigen; J doma 99.6 2.5E-16 8.7E-21 118.7 2.2 59 26-87 11-71 (79)
28 1n4c_A Auxilin; four helix bun 99.6 3.1E-16 1.1E-20 135.6 2.8 63 25-87 116-182 (182)
29 3uo3_A J-type CO-chaperone JAC 99.6 1.3E-15 4.6E-20 132.0 4.4 67 23-91 8-81 (181)
30 3ag7_A Putative uncharacterize 99.5 1.2E-15 4E-20 121.3 2.1 59 23-82 38-104 (106)
31 2qwo_B Putative tyrosine-prote 99.5 1.3E-15 4.4E-20 117.9 2.1 55 26-80 33-91 (92)
32 2guz_A Mitochondrial import in 99.5 1.8E-15 6.1E-20 111.7 2.0 57 25-84 13-70 (71)
33 3apo_A DNAJ homolog subfamily 99.5 2.2E-15 7.7E-20 155.7 -0.5 76 23-98 18-94 (780)
34 2y4t_A DNAJ homolog subfamily 98.9 1.1E-09 3.7E-14 102.7 5.3 65 25-89 381-449 (450)
35 2guz_B Mitochondrial import in 98.7 1.1E-08 3.8E-13 73.8 4.4 52 26-80 4-58 (65)
36 2pzi_A Probable serine/threoni 87.5 0.54 1.9E-05 47.3 5.2 52 19-77 622-675 (681)
37 1vda_A FMBP-1, fibroin-modulat 37.1 17 0.00058 20.3 1.5 12 180-191 1-12 (26)
No 1
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.82 E-value=2e-20 Score=140.31 Aligned_cols=70 Identities=33% Similarity=0.527 Sum_probs=66.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhhhHHHHHhhhH
Q 021999 25 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 94 (304)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 94 (304)
..|||+||||+++++..+|+++|++|+++||||+++.+.+.+.|+.|++||++|+||.+|..||.++..+
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 71 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEG 71 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGG
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccc
Confidence 3689999999999999999999999999999999998889999999999999999999999999998654
No 2
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=1.5e-20 Score=144.72 Aligned_cols=75 Identities=35% Similarity=0.471 Sum_probs=69.5
Q ss_pred HHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhhhHHHHHhhh
Q 021999 19 RIMGVEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 93 (304)
Q Consensus 19 r~l~~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 93 (304)
+.+.....|||+||||+++++..+|+++|++|+++||||+++.+.+.+.|+.|++||++|+||.+|..||.++..
T Consensus 10 ~~~~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 84 (88)
T 2cug_A 10 QSLSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSG 84 (88)
T ss_dssp CCCCSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred hhhccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 345556789999999999999999999999999999999999888999999999999999999999999998853
No 3
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=2.9e-20 Score=139.79 Aligned_cols=71 Identities=35% Similarity=0.531 Sum_probs=67.0
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhhhHHHHHhhh
Q 021999 23 VEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 93 (304)
Q Consensus 23 ~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 93 (304)
....|||+||||+++++..+|+++|++++++||||+++.+.+.+.|+.|++||++|+||.+|..||.++..
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~ 74 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSG 74 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence 34689999999999999999999999999999999999888999999999999999999999999998754
No 4
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.80 E-value=6.5e-20 Score=146.70 Aligned_cols=78 Identities=37% Similarity=0.586 Sum_probs=71.3
Q ss_pred HHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCC-CchHHHHHHHHHHHHHHcCChhhhhHHHHHhhhHHH
Q 021999 19 RIMGVEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEE 96 (304)
Q Consensus 19 r~l~~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~ 96 (304)
|.+.....+||+||||+++++..+||++|++|+++||||+++ .+.+.+.|+.|++||+||+||.+|..||.++..+..
T Consensus 10 r~~~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 10 RSLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp CCTTSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred cccCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 456677899999999999999999999999999999999998 467899999999999999999999999999876544
No 5
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=7.3e-20 Score=140.83 Aligned_cols=72 Identities=31% Similarity=0.501 Sum_probs=67.5
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhhhHHHHHhhhH
Q 021999 23 VEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLK 94 (304)
Q Consensus 23 ~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~ 94 (304)
....+||+||||+++++..+|+++|++|+++||||+++.+.+.+.|+.|++||++|+||.+|..||.++...
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 75 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSA 75 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 346799999999999999999999999999999999998889999999999999999999999999988644
No 6
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=9.1e-20 Score=137.29 Aligned_cols=71 Identities=32% Similarity=0.473 Sum_probs=66.0
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCC-CchHHHHHHHHHHHHHHcCChhhhhHHHHHhhh
Q 021999 23 VEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 93 (304)
Q Consensus 23 ~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 93 (304)
....|||+||||+++++..+|+++|++|+++||||+++ .+.+.+.|+.|++||++|+||.+|..||.++..
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 75 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSG 75 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCc
Confidence 35679999999999999999999999999999999998 467899999999999999999999999998753
No 7
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.79 E-value=1.4e-19 Score=134.30 Aligned_cols=67 Identities=33% Similarity=0.566 Sum_probs=62.0
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhhhHHHHHhh
Q 021999 24 EGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIK 92 (304)
Q Consensus 24 ~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~ 92 (304)
...+||+||||+++++..+|+++|++++++||||+++.. .+.|+.|+.||++|+||.+|..||.+|.
T Consensus 6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~--~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG--AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC--HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH--HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 468999999999999999999999999999999998643 6899999999999999999999999874
No 8
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=1.5e-19 Score=137.01 Aligned_cols=70 Identities=34% Similarity=0.441 Sum_probs=64.8
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHHHHHHcCChhhhhHHHHHhhh
Q 021999 24 EGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHP--QAHQAFIKLNKAFKELQDPEKRKALDEKIKL 93 (304)
Q Consensus 24 ~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~--~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 93 (304)
...|||+||||+++++..+|+++|++|+++||||+++.. .+.+.|+.|++||++|+||.+|..||.++..
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 78 (82)
T 2ej7_A 7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSG 78 (82)
T ss_dssp SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence 457999999999999999999999999999999999853 5788999999999999999999999998754
No 9
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=1.9e-19 Score=144.56 Aligned_cols=77 Identities=30% Similarity=0.424 Sum_probs=69.3
Q ss_pred HHHhcC---CCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCC-CchHHHHHHHHHHHHHHcCChhhhhHHHHHhhh
Q 021999 18 TRIMGV---EGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 93 (304)
Q Consensus 18 ~r~l~~---~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 93 (304)
.+|+.+ ...|||+||||+++++..+||++||+|+++||||+++ .+.+.+.|+.|++||+||+||.+|..||.++..
T Consensus 9 ~~i~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 88 (112)
T 2ctq_A 9 DAILNYRSEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRS 88 (112)
T ss_dssp CCCCCCCCCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred HHHHhccccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhh
Confidence 345543 3589999999999999999999999999999999998 578999999999999999999999999999865
Q ss_pred H
Q 021999 94 K 94 (304)
Q Consensus 94 ~ 94 (304)
+
T Consensus 89 ~ 89 (112)
T 2ctq_A 89 Q 89 (112)
T ss_dssp T
T ss_pred c
Confidence 4
No 10
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=2.2e-19 Score=141.13 Aligned_cols=73 Identities=22% Similarity=0.460 Sum_probs=66.9
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCC-CchHHHHHHHHHHHHHHcCChhhhhHHHHHhhhHH
Q 021999 23 VEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKE 95 (304)
Q Consensus 23 ~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~ 95 (304)
+...+||+||||+++++..+||++|++|+++||||+++ .+.+.+.|+.|++||+||+||.+|..||..+...+
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~e 87 (99)
T 2yua_A 14 YSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLSDE 87 (99)
T ss_dssp SCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCCHH
T ss_pred CCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccccc
Confidence 45689999999999999999999999999999999997 57789999999999999999999999999765443
No 11
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.78 E-value=1.4e-19 Score=140.65 Aligned_cols=71 Identities=30% Similarity=0.462 Sum_probs=65.2
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC-------chHHHHHHHHHHHHHHcCChhhhhHHHHHhhh
Q 021999 23 VEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH-------PQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 93 (304)
Q Consensus 23 ~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~-------~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 93 (304)
+...|||+||||+++++..+||++|++|+++||||+++. +.+.+.|+.|++||+||+||.+|..||..+..
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 90 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 90 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccC
Confidence 456899999999999999999999999999999999873 45889999999999999999999999998753
No 12
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.77 E-value=2.7e-19 Score=142.90 Aligned_cols=89 Identities=20% Similarity=0.282 Sum_probs=73.7
Q ss_pred cCCCCCcccccCCCCCC-CHHHHHHHHHHHHHhhCCCCCCC----chHHHHHHHHHHHHHHcCChhhhhHHHHHhhhHHH
Q 021999 22 GVEGDCPYDVIGANHNM-SAENIKKRYWKLSLFVHPDKCPH----PQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEE 96 (304)
Q Consensus 22 ~~~~~d~Y~iLgv~~~a-s~~eIkkaYr~l~~~~HPDk~~~----~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~ 96 (304)
.+...|||+||||++++ +..+||++||+|+++||||+++. +.+.+.|+.|++||++|+||.+|..||.++.....
T Consensus 11 ~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~~~~ 90 (109)
T 2qsa_A 11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDHPDQ 90 (109)
T ss_dssp TTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTTC
T ss_pred HcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccCchH
Confidence 35578999999999999 99999999999999999999986 56889999999999999999999999999864332
Q ss_pred HHHHHHHHHHhhhhhhhhhhhc
Q 021999 97 QEKFKVELKAMQEGAQWRKSQG 118 (304)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~fg 118 (304)
. ..++..+|+..|+
T Consensus 91 ~--------~~~~~~~~~~~~~ 104 (109)
T 2qsa_A 91 R--------FYNYYQYYRLRAA 104 (109)
T ss_dssp H--------HHHHHHHHHHC--
T ss_pred H--------HHHHHHHHHHHhc
Confidence 1 2244566666664
No 13
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.77 E-value=5.4e-20 Score=145.60 Aligned_cols=72 Identities=26% Similarity=0.458 Sum_probs=66.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCC-CchHHHHHHHHHHHHHHcCChhhhhHHHHHhhhHHH
Q 021999 25 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEE 96 (304)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~ 96 (304)
..|||+||||+++++..+||++|++|+++||||+++ .+.+.+.|+.|++||+||+||.+|..||.++..+..
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 74 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE 74 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhc
Confidence 368999999999999999999999999999999998 467899999999999999999999999999876543
No 14
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.77 E-value=4.8e-19 Score=139.32 Aligned_cols=72 Identities=29% Similarity=0.435 Sum_probs=64.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC--chHHHHHHHHHHHHHHcCChhhhhHHHHHhhhHHHH
Q 021999 26 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH--PQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEEQ 97 (304)
Q Consensus 26 ~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~~ 97 (304)
.|||+||||+++++..+||++|++|+++||||+++. ..+.+.|+.|++||++|+||.+|..||.++..+...
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 589999999999999999999999999999999985 357899999999999999999999999998766543
No 15
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.76 E-value=9e-19 Score=135.85 Aligned_cols=71 Identities=30% Similarity=0.461 Sum_probs=64.6
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhhhHHHHHhhhHHH
Q 021999 24 EGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEE 96 (304)
Q Consensus 24 ~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~ 96 (304)
...|||+||||+++++..+|+++|++|+++||||+++.. .+.|+.|++||+||+||.+|..||.++..+..
T Consensus 6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 76 (92)
T 2o37_A 6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD--TEKFKEISEAFEILNDPQKREIYDQYGLEAAR 76 (92)
T ss_dssp SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC--HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHH
T ss_pred cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh--HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhh
Confidence 468999999999999999999999999999999998643 57999999999999999999999999865543
No 16
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=6.6e-19 Score=136.45 Aligned_cols=70 Identities=36% Similarity=0.486 Sum_probs=64.6
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC--chHHHHHHHHHHHHHHcCChhhhhHHHHHhhh
Q 021999 24 EGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH--PQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 93 (304)
Q Consensus 24 ~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 93 (304)
...|||+||||+++++..+|+++|++|+++||||+++. +.+.+.|+.|++||++|+||.+|..||.++..
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~ 78 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCD 78 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcc
Confidence 45799999999999999999999999999999999985 36889999999999999999999999998743
No 17
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=9.2e-19 Score=135.32 Aligned_cols=73 Identities=29% Similarity=0.515 Sum_probs=65.8
Q ss_pred hhHHHHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhhhH
Q 021999 12 ERFEEVTRIMGVEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKA 86 (304)
Q Consensus 12 ~~~~e~~r~l~~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vL~dp~~R~~ 86 (304)
+..+.+.+++. ..|||+||||+++++..+||++||+|+++||||+++.+.+.+.|+.|++||++|+||.+|..
T Consensus 15 ~~~~~~~~~~~--~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 15 EQADAIRRIRN--SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp HHHHHHHHHHT--CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHhc--CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 44556667754 68999999999999999999999999999999999988899999999999999999998863
No 18
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.70 E-value=1.9e-17 Score=140.09 Aligned_cols=71 Identities=28% Similarity=0.470 Sum_probs=64.7
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-------hHHHHHHHHHHHHHHcCChhhhhHHHHHhhh
Q 021999 23 VEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHP-------QAHQAFIKLNKAFKELQDPEKRKALDEKIKL 93 (304)
Q Consensus 23 ~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~-------~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 93 (304)
+...|||+||||+++++..+||++||+|++++|||+++.. .+.+.|..|++||+||+||.+|+.||..+..
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~ 84 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCE 84 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcch
Confidence 4567999999999999999999999999999999999854 2678999999999999999999999988754
No 19
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.68 E-value=2.5e-17 Score=144.42 Aligned_cols=70 Identities=34% Similarity=0.601 Sum_probs=65.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCC-CchHHHHHHHHHHHHHHcCChhhhhHHHHHhhhHH
Q 021999 26 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKE 95 (304)
Q Consensus 26 ~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~ 95 (304)
.|||+||||+++|+..+||+|||+|+++||||+++ .+.+.+.|+.|++||++|+||.+|..||.+|..+.
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~ 72 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGL 72 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccc
Confidence 58999999999999999999999999999999996 57789999999999999999999999999986543
No 20
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.66 E-value=5e-18 Score=160.04 Aligned_cols=71 Identities=25% Similarity=0.387 Sum_probs=0.0
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhhhHHHHHhhh
Q 021999 23 VEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIKL 93 (304)
Q Consensus 23 ~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~ 93 (304)
+...|||+||||+++|+.++||+|||+|+++||||+++.+.|.+.|+.|++||++|+||.+|+.||.++..
T Consensus 25 m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 25 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp -----------------------------------------------------------------------
T ss_pred ccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 34589999999999999999999999999999999998888999999999999999999999999998543
No 21
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.66 E-value=6.2e-17 Score=139.61 Aligned_cols=67 Identities=19% Similarity=0.332 Sum_probs=61.2
Q ss_pred CCCcccccCCCCCCC--HHHHHHHHHHHHHhhCCCCCCCch------HHHHHHHHHHHHHHcCChhhhhHHHHHh
Q 021999 25 GDCPYDVIGANHNMS--AENIKKRYWKLSLFVHPDKCPHPQ------AHQAFIKLNKAFKELQDPEKRKALDEKI 91 (304)
Q Consensus 25 ~~d~Y~iLgv~~~as--~~eIkkaYr~l~~~~HPDk~~~~~------a~~~f~~i~~Ay~vL~dp~~R~~YD~~~ 91 (304)
..|||+||||+++++ ..+|+++||+|+++||||+++... +.+.|..|+.||+||+||.+|..||..+
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 77 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSL 77 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHc
Confidence 579999999999987 999999999999999999988543 6789999999999999999999999865
No 22
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.63 E-value=1.2e-16 Score=137.52 Aligned_cols=65 Identities=22% Similarity=0.302 Sum_probs=60.1
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHhhCCCCCCCch------HHHHHHHHHHHHHHcCChhhhhHHHHHh
Q 021999 27 CPYDVIGANHNM--SAENIKKRYWKLSLFVHPDKCPHPQ------AHQAFIKLNKAFKELQDPEKRKALDEKI 91 (304)
Q Consensus 27 d~Y~iLgv~~~a--s~~eIkkaYr~l~~~~HPDk~~~~~------a~~~f~~i~~Ay~vL~dp~~R~~YD~~~ 91 (304)
|||+||||++++ +..+|+++||+|+++||||+++... +.+.|..|+.||+||+||.+|..||..+
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 799999999999 9999999999999999999998532 5679999999999999999999999865
No 23
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.62 E-value=1.2e-17 Score=134.45 Aligned_cols=63 Identities=22% Similarity=0.254 Sum_probs=58.9
Q ss_pred CCcccccCCCCCCCH--HHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhhhHHHHHh
Q 021999 26 DCPYDVIGANHNMSA--ENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKI 91 (304)
Q Consensus 26 ~d~Y~iLgv~~~as~--~eIkkaYr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~ 91 (304)
.+||+||||+++++. .+||+|||+|+++||||+++. .+.|+.|++||+||+||.+|+.||.++
T Consensus 8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~ 72 (114)
T 1gh6_A 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFG 72 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhcc
Confidence 579999999999999 999999999999999999876 479999999999999999999999765
No 24
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.59 E-value=7e-16 Score=136.49 Aligned_cols=67 Identities=22% Similarity=0.347 Sum_probs=60.3
Q ss_pred CCCcccccCCCCC--CCHHHHHHHHHHHHHhhCCCCCCCc------hHHHHHHHHHHHHHHcCChhhhhHHHHHh
Q 021999 25 GDCPYDVIGANHN--MSAENIKKRYWKLSLFVHPDKCPHP------QAHQAFIKLNKAFKELQDPEKRKALDEKI 91 (304)
Q Consensus 25 ~~d~Y~iLgv~~~--as~~eIkkaYr~l~~~~HPDk~~~~------~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~ 91 (304)
..|||+||||++. ++..+|+++||+|+++||||+++.. .+.+.|+.|++||+||+||.+|+.||..+
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l 116 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKL 116 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHh
Confidence 5799999999986 7999999999999999999999743 25678999999999999999999999754
No 25
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.59 E-value=7.6e-17 Score=138.61 Aligned_cols=64 Identities=22% Similarity=0.232 Sum_probs=57.5
Q ss_pred CCcccccCCCCCCC--HHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhhhHHHHHhh
Q 021999 26 DCPYDVIGANHNMS--AENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKIK 92 (304)
Q Consensus 26 ~d~Y~iLgv~~~as--~~eIkkaYr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~ 92 (304)
.+||+||||+++|+ .++||+|||++++++|||+++++ +.|+.|++||++|+||.+|+.||.+|.
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~---e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE---EKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC---TTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH---HHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 68999999999998 69999999999999999998764 789999999999999999999999885
No 26
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.59 E-value=1.7e-16 Score=122.04 Aligned_cols=62 Identities=23% Similarity=0.228 Sum_probs=56.2
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC--chHHHHHHHHHHHHHHcCChhhh
Q 021999 23 VEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPH--PQAHQAFIKLNKAFKELQDPEKR 84 (304)
Q Consensus 23 ~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~vL~dp~~R 84 (304)
+...++|+||||+++|+..+||+|||+|+++||||+++. ..+.+.|+.|++||++|+|...|
T Consensus 13 ~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 13 SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp SCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 344689999999999999999999999999999999986 34889999999999999998766
No 27
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.59 E-value=2.5e-16 Score=118.72 Aligned_cols=59 Identities=17% Similarity=0.276 Sum_probs=54.8
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhhhHH
Q 021999 26 DCPYDVIGANHN--MSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKAL 87 (304)
Q Consensus 26 ~d~Y~iLgv~~~--as~~eIkkaYr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vL~dp~~R~~Y 87 (304)
.++|+||||+++ ++..+||++||+|+++||||+++. .+.|+.|++||++|+|+..|..+
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~---~~~f~~i~~AYe~L~~~~~r~~~ 71 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS---HALMQELNSLWGTFKTEVYNLRM 71 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC---HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHHhhHHHHHHH
Confidence 479999999999 999999999999999999999864 58999999999999999999874
No 28
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.58 E-value=3.1e-16 Score=135.63 Aligned_cols=63 Identities=30% Similarity=0.554 Sum_probs=58.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCch----HHHHHHHHHHHHHHcCChhhhhHH
Q 021999 25 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQ----AHQAFIKLNKAFKELQDPEKRKAL 87 (304)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~----a~~~f~~i~~Ay~vL~dp~~R~~Y 87 (304)
..+||+||||++.|+..+||+|||+++++||||+++... +.+.|+.|++||+||+||.+|..|
T Consensus 116 ~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 369999999999999999999999999999999997543 789999999999999999999877
No 29
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.56 E-value=1.3e-15 Score=132.00 Aligned_cols=67 Identities=22% Similarity=0.358 Sum_probs=60.9
Q ss_pred CCCCCccccc------CCCC-CCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhhhHHHHHh
Q 021999 23 VEGDCPYDVI------GANH-NMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKRKALDEKI 91 (304)
Q Consensus 23 ~~~~d~Y~iL------gv~~-~as~~eIkkaYr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~ 91 (304)
....|||+|| |+++ +++..+|+++||+|+++||||+++. +.+.|+.|++||+||+||.+|..||..+
T Consensus 8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 3467999999 4665 8999999999999999999999975 6789999999999999999999999876
No 30
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.54 E-value=1.2e-15 Score=121.34 Aligned_cols=59 Identities=22% Similarity=0.305 Sum_probs=52.6
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--------hHHHHHHHHHHHHHHcCChh
Q 021999 23 VEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHP--------QAHQAFIKLNKAFKELQDPE 82 (304)
Q Consensus 23 ~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~--------~a~~~f~~i~~Ay~vL~dp~ 82 (304)
+...+||.|||++. |+..+||+|||+++++|||||++.+ .|.+.|+.|++||++|+|+.
T Consensus 38 ~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 38 WSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp CTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 34579999999996 9999999999999999999998632 36889999999999999985
No 31
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.54 E-value=1.3e-15 Score=117.93 Aligned_cols=55 Identities=31% Similarity=0.529 Sum_probs=50.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc----hHHHHHHHHHHHHHHcCC
Q 021999 26 DCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHP----QAHQAFIKLNKAFKELQD 80 (304)
Q Consensus 26 ~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~----~a~~~f~~i~~Ay~vL~d 80 (304)
.++|+||||++.|+..+||+|||+++++||||+++.. .|.+.|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 5899999999999999999999999999999999753 278899999999999964
No 32
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.53 E-value=1.8e-15 Score=111.71 Aligned_cols=57 Identities=19% Similarity=0.211 Sum_probs=51.5
Q ss_pred CCCcccccCCCC-CCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhh
Q 021999 25 GDCPYDVIGANH-NMSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQDPEKR 84 (304)
Q Consensus 25 ~~d~Y~iLgv~~-~as~~eIkkaYr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vL~dp~~R 84 (304)
..++|+||||++ +++..+|+++||+|+++||||++++ .+.|+.|++||++|+++..|
T Consensus 13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~---~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS---PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC---HHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC---HHHHHHHHHHHHHHhhhhhc
Confidence 358999999999 7999999999999999999999754 46999999999999998765
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.48 E-value=2.2e-15 Score=155.65 Aligned_cols=76 Identities=33% Similarity=0.571 Sum_probs=40.9
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCC-CchHHHHHHHHHHHHHHcCChhhhhHHHHHhhhHHHHH
Q 021999 23 VEGDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCP-HPQAHQAFIKLNKAFKELQDPEKRKALDEKIKLKEEQE 98 (304)
Q Consensus 23 ~~~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~dp~~R~~YD~~~~~~~~~~ 98 (304)
....|||+||||+++|+..+||+|||+|+++||||+++ .+.+.+.|+.|++||++|+||.+|+.||.+|..+....
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~ 94 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 94 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence 45689999999999999999999999999999999996 56788999999999999999999999999997766543
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.89 E-value=1.1e-09 Score=102.75 Aligned_cols=65 Identities=35% Similarity=0.564 Sum_probs=56.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCch----HHHHHHHHHHHHHHcCChhhhhHHHH
Q 021999 25 GDCPYDVIGANHNMSAENIKKRYWKLSLFVHPDKCPHPQ----AHQAFIKLNKAFKELQDPEKRKALDE 89 (304)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIkkaYr~l~~~~HPDk~~~~~----a~~~f~~i~~Ay~vL~dp~~R~~YD~ 89 (304)
..++|.+||+...++..+|+++|+++++.+|||+.+.+. +...|..|++||++|+||.+|..||.
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 458999999999999999999999999999999998654 88999999999999999999999996
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.70 E-value=1.1e-08 Score=73.82 Aligned_cols=52 Identities=15% Similarity=0.139 Sum_probs=45.5
Q ss_pred CCcccccCCCCC---CCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCC
Q 021999 26 DCPYDVIGANHN---MSAENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKELQD 80 (304)
Q Consensus 26 ~d~Y~iLgv~~~---as~~eIkkaYr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d 80 (304)
...|.||||++. ++.++|+++||+|...+|||+.+++ .....|+.|+++|..
T Consensus 4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~---yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSF---YLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCH---HHHHHHHHHHHHHHH
Confidence 346899999999 9999999999999999999997654 677789999999853
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=87.51 E-value=0.54 Score=47.25 Aligned_cols=52 Identities=8% Similarity=0.089 Sum_probs=40.5
Q ss_pred HHhcCCCCCcccccCCCCCCCH--HHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHH
Q 021999 19 RIMGVEGDCPYDVIGANHNMSA--ENIKKRYWKLSLFVHPDKCPHPQAHQAFIKLNKAFKE 77 (304)
Q Consensus 19 r~l~~~~~d~Y~iLgv~~~as~--~eIkkaYr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~v 77 (304)
.++.....+||.|||++.+... ..|+++||++++..+++ .+++..|..|+.|
T Consensus 622 ~~~~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 622 DWLKDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV 675 (681)
T ss_dssp HHHTSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred HHHHccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence 4455566789999999776655 67999999999976655 3688888888876
No 37
>1vda_A FMBP-1, fibroin-modulator-binding-protein-1; tandem repeat, N-CAP, DNA binding, transcription; NMR {Synthetic} PDB: 1wnn_A
Probab=37.14 E-value=17 Score=20.31 Aligned_cols=12 Identities=25% Similarity=0.468 Sum_probs=10.3
Q ss_pred CChHHHHHHHHh
Q 021999 180 DTPSDRAQKAKM 191 (304)
Q Consensus 180 eTP~ek~~rl~~ 191 (304)
|||+++..||..
T Consensus 1 esp~qr~~rl~r 12 (26)
T 1vda_A 1 ETPAQRQARLLR 12 (26)
T ss_dssp CCHHHHHHHHTS
T ss_pred CCHHHHHHHHHH
Confidence 799999999864
Done!