BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 022000
         (304 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q40784|AAPC_CENCI Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2
           SV=1
          Length = 329

 Score =  425 bits (1092), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 196/292 (67%), Positives = 242/292 (82%), Gaps = 3/292 (1%)

Query: 15  EVTKDRNGIEQVVLRNPRGASAKISLHGGQALSWRTERGEELLFTSTKAIFKPPHAVRGG 74
           E+ K  +G+E+VVLR  R   A+I L+GGQ  SW+ + GEELLF S+KAIFKPP A+RGG
Sbjct: 25  ELVKTPSGLEKVVLRGARNCCAEIYLYGGQVTSWKNDNGEELLFLSSKAIFKPPKAIRGG 84

Query: 75  IPICFPQFGNRGSLEQHGFARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWP 134
           IPIC PQFG  G+LEQHGFARNR W ID++PPPL P +   K +VDL+L+P+EEDLKIWP
Sbjct: 85  IPICLPQFGTHGNLEQHGFARNRFWSIDNDPPPL-PVNPAIKAFVDLILRPAEEDLKIWP 143

Query: 135 HSFEFRLRVSLAADGNLALISRIRNINC--KPFSFSIAYHTYFAISDISEVRIEGLETLD 192
           HSFEFRLRV+L   G+L+L SRIRN N   +PFS++ AYHTYF +SDISEVR+EGLET+D
Sbjct: 144 HSFEFRLRVALGPSGDLSLTSRIRNTNTDGRPFSYTFAYHTYFFVSDISEVRVEGLETMD 203

Query: 193 YLDNLCQRERFTEQGDALTFESEIDRVYLSSSDKIAILDHERKRTFVIHKEGLPDVVVWN 252
           YLDNL  +ERFTEQGDA+ FESE+D+VYL++  KIAI+DHE+K+TFV+ KEGLPD VVWN
Sbjct: 204 YLDNLKAKERFTEQGDAIVFESEVDKVYLAAPSKIAIIDHEKKKTFVVTKEGLPDAVVWN 263

Query: 253 PWERKSKSMADFGDEEYRHMLCVDGAAIEKPITLKPGEEWTGRLELSLVHSS 304
           PW++K+K+M DFGD EY++MLCV+ AA+EKPITLKPGEEW GR+ LS V SS
Sbjct: 264 PWDKKAKAMQDFGDAEYKNMLCVEPAAVEKPITLKPGEEWRGRIALSAVPSS 315


>sp|Q03161|YMY9_YEAST Glucose-6-phosphate 1-epimerase OS=Saccharomyces cerevisiae (strain
           ATCC 204508 / S288c) GN=YMR099C PE=1 SV=1
          Length = 297

 Score =  140 bits (352), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 24  EQVVLRNP--RGASAKISLHGGQALSWRTERGEELLFTSTKAIFKPPHAVRGGIPICFPQ 81
           ++VVL +P     S  I  +G    SW+  + EE L+ ST A       VRGGIP+ FP 
Sbjct: 8   KEVVLTHPADETTSVHILKYGATVYSWKL-KSEEQLWLSTAAKLDGSKPVRGGIPLVFPV 66

Query: 82  FGNRGS------LEQHGFARNRSWVI----DDNPPPLKPSDSQGKVYVDLLLKP---SEE 128
           FG   +      L QHG ARN +W       +NPP            V   LKP   + E
Sbjct: 67  FGKNSTDEHLSKLPQHGLARNSTWEFLGQTKENPPT-----------VQFGLKPEIANPE 115

Query: 129 DLKIWPHSFEFRLRVSLAADGNLALISRIRNINCKPFSFSIAYHTYFAISDISEVRIEGL 188
             K+WP  +   L V L +D     I      + K   F+  +HTYF I DI    +  L
Sbjct: 116 LTKLWPMDYLLILTVELGSDYLKTAIEVENTSSSKELKFNWLFHTYFRIEDIEGTMVSNL 175

Query: 189 ETLDYLDNLCQRERFTEQGDALTFESEIDRVY--LSSSDKIAILDHERKRTFVIHKEGLP 246
             +   D L  +E + ++   +TF  E D +Y  +S+   I I+D +  +   + +  LP
Sbjct: 176 AGMKLYDQLL-KESYVDKHPVVTFNQETDVIYQNVSAERAIQIVD-KGVQIHTLKRYNLP 233

Query: 247 DVVVWNPWERKSKSMADFGDEE-YRHMLCVDGAAIEKPITLKPGEEWTG 294
           D VVWNPW  KS+ MADF  +  Y+ M+C++   +   I+L PG++W  
Sbjct: 234 DTVVWNPWIEKSQGMADFEPKTGYQQMICIEPGHVHDFISLAPGKKWNA 282


>sp|P39173|YEAD_ECOLI Putative glucose-6-phosphate 1-epimerase OS=Escherichia coli
           (strain K12) GN=yeaD PE=1 SV=2
          Length = 294

 Score =  123 bits (309), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 120/258 (46%), Gaps = 16/258 (6%)

Query: 23  IEQVVLRNPRGASAKISLHGGQALSWRTERGEELLFTSTKAIFKPPHAVRGGIPICFPQF 82
           ++ +V+ +P+   A  +L G   LSW+    EE+L+ S    FK   A+RGG+P+C+P F
Sbjct: 26  LDLIVVDHPQ-VKASFALQGAHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWPWF 84

Query: 83  G--NRGSLEQHGFARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFR 140
           G   +  L  HGFARN  W +  +       D+ G V +   L  SEE  K WPH F   
Sbjct: 85  GPAAQQGLPAHGFARNLPWTLKSH-----HEDADG-VALTFELTQSEETKKFWPHDFTLL 138

Query: 141 LRVSLAADGNLALISRIRNINCKPFSFSIAYHTYFAISDISEVRIEGLETLDYLDNLCQR 200
               +     + L S         F  + A HTYF + DI++V + GL    ++D +   
Sbjct: 139 AHFRVGKTCEIDLESH------GEFETTSALHTYFNVGDIAKVSVSGLGD-RFIDKVNDA 191

Query: 201 ERFTEQGDALTFESEIDRVYLSSSDKIAILDHERKRTFVIHKEGLPDVVVWNPWERKSKS 260
           +         TF    DRVYL+  D   I D    R   +  +   +VV WNP    S S
Sbjct: 192 KENVLTDGIQTFPDRTDRVYLNPQDCSVINDEALNRIIAVGHQHHLNVVGWNPGPALSIS 251

Query: 261 MADFGDEEYRHMLCVDGA 278
           M D  D+ Y+  +CV+ A
Sbjct: 252 MGDMPDDGYKTFVCVETA 269


>sp|P44160|Y1317_HAEIN Putative glucose-6-phosphate 1-epimerase OS=Haemophilus influenzae
           (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1317
           PE=3 SV=1
          Length = 271

 Score = 86.7 bits (213), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 46/237 (19%)

Query: 54  EELLFTSTKAIFKPPHAVRGGIPICFPQFGNRGSLEQHGFARNRSWVIDDNPPPLKPSDS 113
           +++L+ S    FK  +A+RGG+PIC+P FG       HG AR R W +            
Sbjct: 53  QDVLWLSEVEPFKNGNAIRGGVPICYPWFGGVKQ-PAHGTARIRLWQLSH---------- 101

Query: 114 QGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNL--ALISRIRNINCKPFSFS--- 168
               Y+ +                + RL   L +D N+  A +S +    C   +F+   
Sbjct: 102 ---YYISV---------------HKVRLEFELFSDLNIIEAKVSMVFTDKCH-LTFTHYG 142

Query: 169 -----IAYHTYFAISDISEVRIEGLETLDYLDNLCQRERFTEQGDALTFESEIDRVYLSS 223
                 A HTYF I DI++V ++GL    + ++L Q++        ++    +D +Y + 
Sbjct: 143 EESAQAALHTYFNIGDINQVEVQGLPETCF-NSLNQQQENVPSPRHIS--ENVDCIYSAE 199

Query: 224 SDKIAILDHERKRTFVIHKEGLPDVVVWNPWERKSKSMADFGDEEYRHMLCVDGAAI 280
           + +  ILD    RT  +H       V+WNPW +K+  M++ G   Y+ MLC++ A I
Sbjct: 200 NMQNQILDKSFNRTIALHHHNASQFVLWNPWHKKTSGMSETG---YQKMLCLETARI 253


>sp|O09175|AMPB_RAT Aminopeptidase B OS=Rattus norvegicus GN=Rnpep PE=1 SV=2
          Length = 650

 Score = 31.6 bits (70), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 79  FPQFGNRGSLEQHGFARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHS 136
           FP+   +G     GF  NR W+     PP  P  S G    D L+KP+EE  ++W  S
Sbjct: 463 FPELKKKGVDSIPGFEFNR-WLNTPGWPPYLPDLSPG----DSLMKPAEELAELWAAS 515


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.136    0.412 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,665,439
Number of Sequences: 539616
Number of extensions: 4965140
Number of successful extensions: 10800
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 10783
Number of HSP's gapped (non-prelim): 14
length of query: 304
length of database: 191,569,459
effective HSP length: 117
effective length of query: 187
effective length of database: 128,434,387
effective search space: 24017230369
effective search space used: 24017230369
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)