Query 022000
Match_columns 304
No_of_seqs 220 out of 1233
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 12:30:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022000.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022000hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2hta_A Putative enzyme related 100.0 1.2E-52 4.1E-57 382.5 26.6 275 12-301 31-307 (309)
2 2cir_A Hexose-6-phosphate muta 100.0 2.4E-52 8.2E-57 378.7 25.4 270 21-301 5-289 (297)
3 1jov_A HI1317; hypothetical pr 100.0 6.9E-50 2.3E-54 357.5 25.4 258 12-299 11-269 (270)
4 3k25_A SLR1438 protein; struct 100.0 2.6E-49 9E-54 357.2 28.3 262 15-302 3-288 (289)
5 3q1n_A Galactose mutarotase re 100.0 1E-43 3.5E-48 321.3 26.2 247 25-301 2-294 (294)
6 3dcd_A Galactose mutarotase re 100.0 4.5E-43 1.5E-47 318.6 27.9 246 25-303 2-294 (307)
7 3mwx_A Aldose 1-epimerase; str 100.0 3.2E-43 1.1E-47 322.7 20.0 259 19-304 10-325 (326)
8 3nre_A Aldose 1-epimerase; str 100.0 3E-42 1E-46 311.1 24.9 246 22-303 1-291 (291)
9 3os7_A Galactose mutarotase-li 100.0 1.5E-42 5.2E-47 319.8 23.0 261 18-302 13-340 (341)
10 1yga_A Hypothetical 37.9 kDa p 100.0 5E-40 1.7E-44 303.3 22.2 264 19-301 6-341 (342)
11 1snz_A Aldose 1-epimerase; mut 100.0 4.9E-39 1.7E-43 296.8 19.5 257 22-301 20-342 (344)
12 1lur_A Aldose 1-epimerase; vit 100.0 5.6E-37 1.9E-41 282.4 18.9 257 22-302 12-337 (339)
13 1nsx_A Galactose mutarotase; e 100.0 7.8E-37 2.7E-41 282.0 19.4 261 22-302 11-338 (347)
14 3imh_A Galactose-1-epimerase; 100.0 1.6E-35 5.5E-40 271.2 23.8 263 22-302 17-331 (338)
15 1z45_A GAL10 bifunctional prot 100.0 5.3E-34 1.8E-38 285.8 21.5 262 21-300 371-698 (699)
16 3ty1_A Hypothetical aldose 1-e 99.9 4.4E-24 1.5E-28 198.9 17.7 267 10-302 31-353 (384)
17 3bs6_A Inner membrane protein 94.0 1.3 4.4E-05 38.6 13.8 123 24-168 4-136 (280)
18 3blc_A Inner membrane protein 92.2 2.4 8.3E-05 37.8 13.1 123 23-167 34-166 (330)
19 3isy_A Bsupi, intracellular pr 76.4 6.4 0.00022 29.7 6.1 33 136-169 6-38 (120)
20 4ep8_B Urease subunit beta; al 68.4 5.5 0.00019 28.8 3.8 31 143-176 13-43 (101)
21 4ac7_B Urease subunit beta; hy 59.4 8.4 0.00029 29.0 3.5 30 143-175 19-48 (126)
22 4ubp_B Protein (urease (chain 59.4 8.4 0.00029 29.0 3.5 30 143-175 19-48 (126)
23 1yew_A Particulate methane mon 53.3 15 0.00052 32.9 4.7 28 140-168 256-283 (382)
24 3rfr_A PMOB; membrane, oxidore 50.9 15 0.00051 33.3 4.3 27 140-167 290-316 (419)
25 3qga_A UREA2, fusion of urease 34.9 23 0.00078 29.4 2.7 41 132-175 105-147 (225)
26 4fnq_A Alpha-galactosidase AGA 34.5 1.5E+02 0.0051 29.2 9.0 57 116-179 130-187 (729)
27 1e9y_A Urease subunit alpha; h 31.5 24 0.00083 29.5 2.3 41 132-175 106-147 (238)
28 2wnx_A Glycoside hydrolase, fa 31.2 98 0.0033 24.5 5.9 42 139-180 13-59 (170)
29 2xbt_A Cellulosomal scaffoldin 29.8 87 0.003 24.5 5.3 33 149-181 24-57 (160)
30 2yfo_A Alpha-galactosidase-suc 28.8 1.5E+02 0.0051 29.2 7.9 49 116-171 130-179 (720)
31 1k1x_A 4-alpha-glucanotransfer 28.4 82 0.0028 30.7 5.9 38 19-57 394-433 (659)
32 2kl8_A OR15; structural genomi 28.2 57 0.002 21.4 3.2 17 139-156 31-47 (85)
33 2ys4_A Hydrocephalus-inducing 24.5 90 0.0031 22.8 4.3 37 142-179 35-71 (122)
34 3mi6_A Alpha-galactosidase; NE 22.2 2E+02 0.0067 28.5 7.3 47 116-169 131-178 (745)
35 2xn2_A Alpha-galactosidase; hy 22.0 1.7E+02 0.0057 28.9 6.8 56 116-178 134-190 (732)
36 3rrs_A Cellobiose phosphorylas 21.6 2.8E+02 0.0095 27.7 8.4 20 283-302 252-271 (822)
37 1jz7_A Lactase, beta-galactosi 21.5 3.5E+02 0.012 27.8 9.3 118 25-161 746-874 (1023)
38 3zqx_A Cellulose 1,4-beta-cell 20.8 2E+02 0.0067 22.1 5.7 48 139-186 3-55 (146)
No 1
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A
Probab=100.00 E-value=1.2e-52 Score=382.55 Aligned_cols=275 Identities=28% Similarity=0.521 Sum_probs=235.7
Q ss_pred ceEEEEecCCCceEEEEeCCCccEEEEeCCCcEEEEEEeCCCEEEEEcCCCCcCCCCCcccCcceEEccccCCCC--CCC
Q 022000 12 AAVEVTKDRNGIEQVVLRNPRGASAKISLHGGQALSWRTERGEELLFTSTKAIFKPPHAVRGGIPICFPQFGNRG--SLE 89 (304)
Q Consensus 12 ~~~~~~~~~~g~~~~~L~n~~~~~~~v~~~Ga~l~s~~~~~g~e~l~~~~~~~~~~~~~~rgG~p~lfP~~gr~~--~~~ 89 (304)
..+++.. .++++.++|+|+. ++|+|.++||+|+||+.++|+|+||..+.+.|....++|||+|+||||+||+. .++
T Consensus 31 ~~~~~~~-~~~~~~~~L~n~~-~~a~I~~~GA~l~s~~~~~g~evL~~~~~~~~~~~~~~~GG~pil~P~~gRi~~g~~~ 108 (309)
T 2hta_A 31 PVLSRRQ-LDDLDLIVVDHPQ-VKASFALQGAHLLSWKPVGEEEVLWLSNNTPFKTGVALRGGVPICWPWFGPAAQQGLP 108 (309)
T ss_dssp SSEEEEE-ETTEEEEEEEETT-EEEEEETBTTEEEEEEETTSCCCBCBCTTCCCCTTCCCSBSBCEEBSCCSSCSSTTCC
T ss_pred CceEEee-cCCceEEEEeCCC-eEEEEeccCcEEEEEEeCCCCEEEeCCchHhccCCCCeeccceEEEecCCCCCCCCCC
Confidence 4567765 7899999999984 99999999999999998656899999888888888899999999999999986 479
Q ss_pred CceeEeecceEEeeCCCCCCCCCCCCceEEEEEecCCcchhccCCcceEEEEEEEEccCCcEEEEEEEEeCCCCcEeEee
Q 022000 90 QHGFARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLALISRIRNINCKPFSFSI 169 (304)
Q Consensus 90 ~HG~~~~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~~~~L~~~~~v~N~~~~~~p~~~ 169 (304)
+|||+|++.|++++.+ ++++..+|+|+|.++++++++|||+|+++++|+| + ++|+++|+++| +|||++
T Consensus 109 ~HGfar~~~W~v~~~~------~~~~~~~v~l~l~s~~~~~~gyP~~~~l~vty~L-~-~~L~i~~~~~N----~~~~~~ 176 (309)
T 2hta_A 109 SHGFARNLPWALKAHN------EDDNGVMLTFELQSSEATRKYWPHDFTLLARFKV-G-KTCEIELEAHG----EFATTS 176 (309)
T ss_dssp TTBSGGGSBCEEEEEE------ECSSCEEEEEEEECCHHHHHHSCCCCEEEEEEEE-S-SSEEEEEEEES----SEEEEE
T ss_pred CccCcCCCceEEEeEe------cCCCceEEEEEeCCChHHhhcCCCceEEEEEEEE-C-CceEEEEEEEC----CeEehh
Confidence 9999999999998753 1122367999999887788999999999999999 6 89999999998 899999
Q ss_pred ecccceecCCcceEEEecCCCCcceecccccceeeecCceeeecCCcceEEcCCCCeEEEEeCCCCcEEEEEecCCCcEE
Q 022000 170 AYHTYFAISDISEVRIEGLETLDYLDNLCQRERFTEQGDALTFESEIDRVYLSSSDKIAILDHERKRTFVIHKEGLPDVV 249 (304)
Q Consensus 170 g~HpyF~~~~~~~l~~~gl~~~~~ld~~~~~~~~~~~~~~~~~~~~~D~~y~~~~~~~~l~~~~~g~~i~i~~~~~~~~v 249 (304)
|+||||+++++.++++.++ +..|++.+++++........++|..++|++|++....++|.++.+++.|+|.++++|++|
T Consensus 177 g~H~YFnl~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~df~~~~D~~~~~~~~~~~l~~~~~g~~l~v~~~~~p~~~ 255 (309)
T 2hta_A 177 ALHSYFNVGDIANVKVSGL-GDRFIDKVNDAKEGVLTDGIQTFPDRTDRVYLNPEACSVIHDATLNRTIDVVHHHHLNVV 255 (309)
T ss_dssp EECCEEECSCGGGCEEECC-CSEEEETTTTTEEEECSSSCEECSSCEEEEESSCCSEEEEEETTTTEEEEEEEESCSEEE
T ss_pred cCCceEecCCccceEEECC-CCceEeccCCcccccccCCceecCCccCcEEeCCCCCEEEEeCCCCcEEEEEECCCCcEE
Confidence 9999999998777777766 567887665554433345568888899999986556789999999999999998899999
Q ss_pred EeCCccccccccCCCCCCCcCcEEEeccCccCCCeEeCCCCEEEEEEEEEEE
Q 022000 250 VWNPWERKSKSMADFGDEEYRHMLCVDGAAIEKPITLKPGEEWTGRLELSLV 301 (304)
Q Consensus 250 vwtp~~~~~~~~~d~~~~~~~~~vCiEp~~~~~~~~L~pGe~~~~~~~i~~~ 301 (304)
||||+.++++.|.|+++++|++|||||||+..+.++|+|||+++.+++|++.
T Consensus 256 vwtp~~~~~~~~~d~~~~~~~~~vClEp~~~~~~~~L~PGe~~~~~~~~~~~ 307 (309)
T 2hta_A 256 GWNPGPALSVSMGDMPDDGYKTFVCVETVYATAPQQATEEKPSRLAQTICVA 307 (309)
T ss_dssp EEECHHHHHHHCTTSCTTGGGGEEEEEEEEEEEEEEEBTTBCEEEEEEEEEE
T ss_pred EECCCcccccccccCCccccccEEEECeeecCCCEEECCCCeEEEEEEEEEe
Confidence 9999755555677888888899999999998778999999999999999985
No 2
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A*
Probab=100.00 E-value=2.4e-52 Score=378.70 Aligned_cols=270 Identities=34% Similarity=0.630 Sum_probs=229.3
Q ss_pred CCceEEEEeCCCcc--EEEEeCCCcEEEEEEeCCCEEEEEcCCCCcCCCCCcccCcceEEccccCCCC------CCCCce
Q 022000 21 NGIEQVVLRNPRGA--SAKISLHGGQALSWRTERGEELLFTSTKAIFKPPHAVRGGIPICFPQFGNRG------SLEQHG 92 (304)
Q Consensus 21 ~g~~~~~L~n~~~~--~~~v~~~Ga~l~s~~~~~g~e~l~~~~~~~~~~~~~~rgG~p~lfP~~gr~~------~~~~HG 92 (304)
+|++.++|+|+++. +++|+++||+|+||+. .|+|+||..+.+.|....++|||+|+||||+||+. ++++||
T Consensus 5 ~~~~~~~L~n~~~~~~~~~i~~~Ga~l~s~~~-~G~~vl~~~~~~~~~~~~~~~GGip~l~P~~gr~~~~~~~y~l~~HG 83 (297)
T 2cir_A 5 ETDKEVVLTHPADETTSVHILKYGATVYSWKL-KSEEQLWLSTAAKLDGSKPVRGGIPLVFPVFGKNSTDEHLSKLPQHG 83 (297)
T ss_dssp ECSSEEEEEETTEEEEEEEEETBTTEEEEEEE-TTEECBCBCTTCCCSSSSCCSBSBCEEBSCSSCCSSSTTGGGSCTTB
T ss_pred cCCCEEEEeCCCCceeEEEEECCCcEEEEEEe-CCeEEEecCcHHHhcCCCCccCCCCEEEEecCCCCCCcccCCCCCcc
Confidence 56889999998756 8999999999999998 58899999888888888899999999999999986 679999
Q ss_pred eEeecceEEeeCCCCCCCCCCCCceEEEEEecC---CcchhccCCcceEEEEEEEEccCCcEEEEEEEEeCC-CCcEeEe
Q 022000 93 FARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKP---SEEDLKIWPHSFEFRLRVSLAADGNLALISRIRNIN-CKPFSFS 168 (304)
Q Consensus 93 ~~~~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~---~~~~~~~~P~~~~~~~~y~L~~~~~L~~~~~v~N~~-~~~~p~~ 168 (304)
|+|++.|++++.. +++..+|+|++.+ +++++++|||+|+++++|+|.+ ++|+++|+++|++ +++|||+
T Consensus 84 far~~~W~v~~~~-------~~~~~~v~l~l~s~~~~~~~~~g~P~~~~~~vty~L~~-~~L~i~~~~~N~~~d~~~~~~ 155 (297)
T 2cir_A 84 LARNSTWEFLGQT-------KENPPTVQFGLKPEIANPELTKLWPMDYLLILTVELGS-DYLKTAIEVENTSSSKELKFN 155 (297)
T ss_dssp SGGGSBCEEEEEE-------EETTEEEEEEECGGGSCHHHHHHSCCCCEEEEEEEECS-SEEEEEEEEECCCSSCCEEEE
T ss_pred ccCCCceEEEeec-------cCCceEEEEEecCCCCCHHHHhhCCCcEEEEEEEEEcC-CEEEEEEEEEcCCCCcceEEe
Confidence 9999999998652 0113679999998 7888999999999999999987 8999999999999 9999999
Q ss_pred eecccceecCCcceEEEecCCCCcceecccccceeeecCceeeecCCcceEEcCCC--CeEEEEeCCCCcEEEEEecCCC
Q 022000 169 IAYHTYFAISDISEVRIEGLETLDYLDNLCQRERFTEQGDALTFESEIDRVYLSSS--DKIAILDHERKRTFVIHKEGLP 246 (304)
Q Consensus 169 ~g~HpyF~~~~~~~l~~~gl~~~~~ld~~~~~~~~~~~~~~~~~~~~~D~~y~~~~--~~~~l~~~~~g~~i~i~~~~~~ 246 (304)
+|+||||+++++.++.+.|+.+..++|.... .........+.+..++|++|.... ..++|.++ +++.|+|.++++|
T Consensus 156 ~~~H~YFnl~~~~~~~~~gv~~~~~~d~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~l~~~-~g~~l~v~~~~~p 233 (297)
T 2cir_A 156 WLFHTYFRIEDIEGTMVSNLAGMKLYDQLLK-ESYVDKHPVVTFNQETDVIYQNVSAERAIQIVDK-GVQIHTLKRYNLP 233 (297)
T ss_dssp EEECCEEECSCGGGEEEESCTTCEEEETTTT-EEEECCSSSBCCSSCEEEEECCCCTTCCEEEEET-TEEEEEEEEESCC
T ss_pred eecCceEeCCCccceEEecCCCCccEeccCC-ccccccCCccccCCccceEEeCCCCCccEEEEcC-CCCEEEEEecCCC
Confidence 9999999999877788888765567775422 223323345667778999998764 57899999 9999999998899
Q ss_pred cEEEeCCccccccccCCC-CCCCcCcEEEeccCccCCCeEeCCCCEEEEEEEEEEE
Q 022000 247 DVVVWNPWERKSKSMADF-GDEEYRHMLCVDGAAIEKPITLKPGEEWTGRLELSLV 301 (304)
Q Consensus 247 ~~vvwtp~~~~~~~~~d~-~~~~~~~~vCiEp~~~~~~~~L~pGe~~~~~~~i~~~ 301 (304)
++|||||+.++++.|+++ ++.+|++|||||||+..+.++|+|||+++.+++|++.
T Consensus 234 ~~~v~t~~~~~~~~~~~~~~~~~~~~~vClEp~~~~~~~~L~pGe~~~~~~~~~~~ 289 (297)
T 2cir_A 234 DTVVWNPWIEKSQGMADFEPKTGYQQMICIEPGHVHDFISLAPGKKWNAYQLLCKE 289 (297)
T ss_dssp EEEEEECHHHHHHHCTTCCSTTGGGGEEEEEEEEEEEEEEECTTCEEEEEEEEECC
T ss_pred cEEEECcchhhccccccCCCccccccEEEECceECCCCEEECCCCeEEEEEEEEEE
Confidence 999999965445556666 6677889999999997678999999999999999985
No 3
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7
Probab=100.00 E-value=6.9e-50 Score=357.49 Aligned_cols=258 Identities=29% Similarity=0.512 Sum_probs=216.1
Q ss_pred ceEEEEecCCCceEEEEeCCCccEEEEeCCCcEEEEEEeC-CCEEEEEcCCCCcCCCCCcccCcceEEccccCCCCCCCC
Q 022000 12 AAVEVTKDRNGIEQVVLRNPRGASAKISLHGGQALSWRTE-RGEELLFTSTKAIFKPPHAVRGGIPICFPQFGNRGSLEQ 90 (304)
Q Consensus 12 ~~~~~~~~~~g~~~~~L~n~~~~~~~v~~~Ga~l~s~~~~-~g~e~l~~~~~~~~~~~~~~rgG~p~lfP~~gr~~~~~~ 90 (304)
..+++. ..+|++.++|+|+. .+++|..+||+|+||+.+ +|.|+||.++.+.|+..+++|||+|+||||+||+. +++
T Consensus 11 ~~~~~~-~~~~~~~~~l~~~~-~~a~i~~~Ga~l~s~~~~~~g~e~Lw~~~~~~~~~~~~irGGiPvlfP~~gr~~-~~~ 87 (270)
T 1jov_A 11 PELHLV-QHNDIPVLHLKHAV-GTAKISLQGAQLISWKPQNAKQDVLWLSEVEPFKNGNAIRGGVPICYPWFGGVK-QPA 87 (270)
T ss_dssp TTEEEE-EETTEEEEEEEETT-EEEEEETBTTEEEEEEETTCSSCSBCBCTTCCCCTTSCCSBSCCEEBSSCGGGS-SST
T ss_pred CceEEe-eeCCceEEEEeCCC-cEEEEECCCCEEEEEEECCCCceEEEECcHHhcCCCCCccCccEEEEeccCCCC-CCC
Confidence 445564 47899999999985 899999999999999985 57899999999999989999999999999999975 799
Q ss_pred ceeEeecceEEeeCCCCCCCCCCCCceEEEEEecCCcchhccCCcceEEEEEEEEccCCcEEEEEEEEeCCCCcEeEeee
Q 022000 91 HGFARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLALISRIRNINCKPFSFSIA 170 (304)
Q Consensus 91 HG~~~~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~~~~L~~~~~v~N~~~~~~p~~~g 170 (304)
|||||++.|+|.+.+ .+++...++|.+.+++ +.|+++++|+|. |+++++|+|++++ ||++|
T Consensus 88 HGfaR~~~W~v~~~~------~~~~~v~l~~~l~~~~-------~~f~l~~~~~L~----l~~~~~v~N~g~~--p~~~g 148 (270)
T 1jov_A 88 HGTARIRLWQLSHYY------ISVHKVRLEFELFSDL-------NIIEAKVSMVFT----DKCHLTFTHYGEE--SAQAA 148 (270)
T ss_dssp TBSGGGSBCEEEEEE------EETTEEEEEEEEECTT-------SCEEEEEEEEES----SSEEEEEEECCSS--CEEEE
T ss_pred CceecCCCcEEeeec------cCCCcEEEEEEECCCc-------cccEEEEEEEEC----CeEEEEEEeCCch--hHhhh
Confidence 999999999998763 1123567788876642 358899999994 7788888999985 68999
Q ss_pred cccceecCCcceEEEecCCCCcceecccccceeeecCceeeecCCcceEEcCCCCeEEEEeCCCCcEEEEEecCCCcEEE
Q 022000 171 YHTYFAISDISEVRIEGLETLDYLDNLCQRERFTEQGDALTFESEIDRVYLSSSDKIAILDHERKRTFVIHKEGLPDVVV 250 (304)
Q Consensus 171 ~HpyF~~~~~~~l~~~gl~~~~~ld~~~~~~~~~~~~~~~~~~~~~D~~y~~~~~~~~l~~~~~g~~i~i~~~~~~~~vv 250 (304)
+||||+++++.+++|+++. ..|+|++...... ..+.+.+.+++|++|.++++.++|.+++.++.|+|..++++++||
T Consensus 149 ~HpyF~v~d~~~~~v~g~~-~~~~d~l~~~~~~--~~~~~~~~~~~D~vy~~~~~~~~i~d~~~~~~i~v~~~~~~~~vv 225 (270)
T 1jov_A 149 LHTYFNIGDINQVEVQGLP-ETCFNSLNQQQEN--VPSPRHISENVDCIYSAENMQNQILDKSFNRTIALHHHNASQFVL 225 (270)
T ss_dssp ECCEEECSCGGGEEEESCC-SEEEETTTTEEEE--CCSSBCCSSCEEEEEECSSSEEEEEETTTTEEEEEEEESCSEEEE
T ss_pred cccceecCCcceEEEECCC-CcceeccCCcccc--cCCcccCCCCccceeCCCCCCEEEEECCCCcEEEEEEcCCCeEEE
Confidence 9999999988889999884 4788876543321 234567778899999988778999999999999999999999999
Q ss_pred eCCccccccccCCCCCCCcCcEEEeccCccCCCeEeCCCCEEEEEEEEE
Q 022000 251 WNPWERKSKSMADFGDEEYRHMLCVDGAAIEKPITLKPGEEWTGRLELS 299 (304)
Q Consensus 251 wtp~~~~~~~~~d~~~~~~~~~vCiEp~~~~~~~~L~pGe~~~~~~~i~ 299 (304)
|||+. +.|+||++++|++||||||++. .+.|+|||+++.+++|+
T Consensus 226 WnP~~---~~~~d~~~~~~~~fvCvEp~~~--~~~L~PGe~~~~~~~i~ 269 (270)
T 1jov_A 226 WNPWH---KKTSGMSETGYQKMLCLETARI--HHLLEFGESLSVEISLK 269 (270)
T ss_dssp EECTT---SCCTTCCTTGGGGEEEEEEEEE--EEEECTTCEEEEEEEEC
T ss_pred ECCCc---ccccccccccCccEEEeCcccc--ceEECCCCEEEEEEEEE
Confidence 99974 3588999999999999999764 57999999998887764
No 4
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP}
Probab=100.00 E-value=2.6e-49 Score=357.20 Aligned_cols=262 Identities=23% Similarity=0.419 Sum_probs=217.2
Q ss_pred EEEecCCCceEEEEeCCC-ccEEEE-eCCCcEEEEEEeCCCEEEEEcCCCCcCCCCCcccCcceEEccccCCCC------
Q 022000 15 EVTKDRNGIEQVVLRNPR-GASAKI-SLHGGQALSWRTERGEELLFTSTKAIFKPPHAVRGGIPICFPQFGNRG------ 86 (304)
Q Consensus 15 ~~~~~~~g~~~~~L~n~~-~~~~~v-~~~Ga~l~s~~~~~g~e~l~~~~~~~~~~~~~~rgG~p~lfP~~gr~~------ 86 (304)
.+.+..++++.|+|+|++ +.++.| +.+||+|+||+. +|+|+||.++.+++++..++++|+|+||||+||+.
T Consensus 3 ~~~~~~~~~~~~~l~n~~~g~~~~v~~~~Ga~l~s~~~-~g~~~l~~~~~~~~~~~~~~~gg~Pvl~P~~gri~~g~~~~ 81 (289)
T 3k25_A 3 NISFTPDRPLTYHLEDDQSLARLSLVPGRGGLVTEWTV-QGQPILYFDRERFQDPSLSVRGGIPILFPICGNLPQDQFNH 81 (289)
T ss_dssp EEEEECCBCCEEEEEETTTTEEEEEEGGGTSEEEEEEE-TTEECBCBCTTGGGSTTSCCCBSBCEEBSCSSCCGGGEEEE
T ss_pred ceeeccCCceEEEEECCCCCeEEEeehhcCCEEEEEEe-CCEEEEecChhhccCcccccCCCCCEEECCCCCCCCCEEEE
Confidence 345557889999999975 788876 589999999998 68999997776667766678999999999999984
Q ss_pred -----CCCCceeEeecceEEeeCCCCCCCCCCCCceEEEEEecCCcchhccCCcceEEEEEEEEccCCcEEEEEEEEeCC
Q 022000 87 -----SLEQHGFARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLALISRIRNIN 161 (304)
Q Consensus 87 -----~~~~HG~~~~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~~~~L~~~~~v~N~~ 161 (304)
++++|||+|++.|++++.. +++..+|+|+|.++++++.+|||+|+++++|+|.+ ++|+++++++|++
T Consensus 82 ~g~~y~l~~HGf~r~~~W~~~~~~-------~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~-~~L~i~~~~~N~~ 153 (289)
T 3k25_A 82 AGKSYRLKQHGFARDLPWEVIGQQ-------TQDNARLDLRLSHNDATLEAFPFAFELVFSYQLQG-HSLRIEQRIANLG 153 (289)
T ss_dssp TTEEEECCTTBSGGGSCCEEEEEE-------CSSSEEEEEEEECCHHHHTTSCSCEEEEEEEEEET-TEEEEEEEEEECS
T ss_pred CCEEeecCCCCCcccCCeEEEEec-------CCCCcEEEEEEecChhHHhcCCceEEEEEEEEEeC-CEEEEEEEEEcCC
Confidence 5799999999999998753 22367899999988778899999999999999987 8999999999999
Q ss_pred CCcEeEeeecccceecCCcceEEEecCCCCcceecccccceeeecCceeeec-CCcceEEcCC-CCeEEEEeCCCCcEEE
Q 022000 162 CKPFSFSIAYHTYFAISDISEVRIEGLETLDYLDNLCQRERFTEQGDALTFE-SEIDRVYLSS-SDKIAILDHERKRTFV 239 (304)
Q Consensus 162 ~~~~p~~~g~HpyF~~~~~~~l~~~gl~~~~~ld~~~~~~~~~~~~~~~~~~-~~~D~~y~~~-~~~~~l~~~~~g~~i~ 239 (304)
+++|||++|+||||+++++.+++|.++. ..|+|..... ... ..+.+.+. ..+|++|... ...++|.++..++.|+
T Consensus 154 ~~~~~~~~~~H~yF~~~~~~~~~~~~~~-~~~~d~~~~~-~~~-~~~~~~~~~~~~D~~~~~~~~~~~~l~~~~~~~~i~ 230 (289)
T 3k25_A 154 DQRMPFSLGFHPYFFCREKLGITLAIPA-NDYLDQKTGD-CHG-YDGQLNLTSPELDLAFTQISQPRAHFIDPDRNLKIE 230 (289)
T ss_dssp SSCEEECCEECCEEECSCCTTCEEECSC-SEEEETTTCC-EEE-CCSCCCTTSSEEEEEECCCSSSEEEEEETTTTEEEE
T ss_pred CCcceeEEecCcEEccCCcceEEEEcCc-ccccccccCc-ccc-cCCcccCCchhhceEeecCCCCeEEEEECCCCCEEE
Confidence 9999999999999999988889998764 5677653321 111 12234443 4789999876 3578999999999999
Q ss_pred EEecC-CCcEEEeCCccccccccCCCCCCCcCcEEEeccCcc--------CCCeEeCCCCEEEEEEEEEEEe
Q 022000 240 IHKEG-LPDVVVWNPWERKSKSMADFGDEEYRHMLCVDGAAI--------EKPITLKPGEEWTGRLELSLVH 302 (304)
Q Consensus 240 i~~~~-~~~~vvwtp~~~~~~~~~d~~~~~~~~~vCiEp~~~--------~~~~~L~pGe~~~~~~~i~~~~ 302 (304)
|..++ ++++|||||.. ++|||||||+. .+.++|+|||+++.+++|++..
T Consensus 231 v~~~~~~~~~vvw~~~~--------------~~fvCvEP~~~~~da~n~~~~~~~L~PGe~~~~~~~i~v~~ 288 (289)
T 3k25_A 231 VSFSELYQTLVLWTVAG--------------KDYLCLEPWSGPRNALNSGEQLAWVEPYSSRSAWVNFQVST 288 (289)
T ss_dssp EEECTTCCEEEEEEESS--------------SCEEEEEEESSCTTHHHHCTTCEEECTTEEEEEEEEEEEEC
T ss_pred EEeCCCCcEEEEEecCC--------------CCEEEEccccCCCCcccCCCCcEEECCCCeEEEEEEEEEEe
Confidence 99986 89999999742 46999999973 4579999999999999999863
No 5
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei}
Probab=100.00 E-value=1e-43 Score=321.31 Aligned_cols=247 Identities=21% Similarity=0.387 Sum_probs=192.5
Q ss_pred EEEEeCCCccEEEEeCCCcEEEEEEeC-CCEEEEEcCCCCcCCCCCcccCcceEEccccCCCC-----------CCCCce
Q 022000 25 QVVLRNPRGASAKISLHGGQALSWRTE-RGEELLFTSTKAIFKPPHAVRGGIPICFPQFGNRG-----------SLEQHG 92 (304)
Q Consensus 25 ~~~L~n~~~~~~~v~~~Ga~l~s~~~~-~g~e~l~~~~~~~~~~~~~~rgG~p~lfP~~gr~~-----------~~~~HG 92 (304)
+++|+|+ +++|+|.++||+|+||+.+ +|+|+||..+.++|. ++.|+||||+||+. ++++||
T Consensus 2 ~~~l~n~-~~~~~i~~~Ga~l~s~~~~~~g~e~l~~~~~~~~~------~~~p~l~P~~~Ri~~g~~~~~G~~y~l~~HG 74 (294)
T 3q1n_A 2 MITIENS-KFKAGIAERGAELQSLVNKADNYEYVWTGDKTFWN------RHAPILFPSIGKSNQDQYRLGAKTYPMSQHG 74 (294)
T ss_dssp EEEEECS-SEEEEEETBTTEEEEEEETTTTEECBCCCCTTTCS------CSCCEEBSCCSCCGGGEEEETTEEEECCTTB
T ss_pred EEEEECC-CEEEEEEccCcEEEEEEeCCCCCEEEEcCChhhcc------CCCCEEEeccCCcCCCEEEECCcEEccCCCC
Confidence 5899998 5999999999999999984 589999998887776 46899999999984 579999
Q ss_pred eEeecceEEeeCCCCCCCCCCCCceEEEEEecCCcchhccCCcceEEEEEEEEccCCcEEEEEEEEeCCCCcEeEeeecc
Q 022000 93 FARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLALISRIRNINCKPFSFSIAYH 172 (304)
Q Consensus 93 ~~~~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~~~~L~~~~~v~N~~~~~~p~~~g~H 172 (304)
|+|++.|++++.+ ..+|+|++.++++++++|||+|+++++|+|.+ ++|+++++++|+++++|||++|+|
T Consensus 75 f~r~~~w~~~~~~----------~~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~~-~~L~i~~~~~N~~~~~~p~~~~~H 143 (294)
T 3q1n_A 75 FARDYDFDVSDKS----------DSAVTFTQHQNAETLKKFPFEYTLAVTYMLTD-GGLSVHYTVTNDDSKSMPFALGFH 143 (294)
T ss_dssp SGGGSBCEEESCC----------SSEEEEEEECCHHHHHHSCCCEEEEEEEEEET-TEEEEEEEEEECSSSCEEECEEEC
T ss_pred CccCcceEEEEcc----------CCEEEEEEEcCcchhhcCCeEEEEEEEEEEeC-CEEEEEEEEEcCCCCceeeeEecC
Confidence 9999999998764 45799999988777899999999999999987 899999999999999999999999
Q ss_pred cceecCC-----cc--eEEEecCC-CCccee----ccccccee--ee-cCceeeecC-Ccce-EE-cC-C-CCeEEEEeC
Q 022000 173 TYFAISD-----IS--EVRIEGLE-TLDYLD----NLCQRERF--TE-QGDALTFES-EIDR-VY-LS-S-SDKIAILDH 232 (304)
Q Consensus 173 pyF~~~~-----~~--~l~~~gl~-~~~~ld----~~~~~~~~--~~-~~~~~~~~~-~~D~-~y-~~-~-~~~~~l~~~ 232 (304)
|||+++. +. .|+|..-. ...++. .++++..+ .. ....+.+.. .+|+ +| +. . ...++|.++
T Consensus 144 ~yFnl~~~~~~~~~d~~l~~~a~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~l~~~~fd~d~~~~~~~~~~~~~l~~~ 223 (294)
T 3q1n_A 144 PAFNVGLKADGSFDDYDLTVEPLNSPLQRFGIGPVPFRNGDVEDIPGAEGNRLPLTHDLLDGGLVILANSEIAKATLASP 223 (294)
T ss_dssp CEEECCBCTTSSBCSCEEEEECCSSCCEEEEESSTTSEEEEEEECTTCBTTEEECCHHHHTTCCEEECCTTCCEEEEECT
T ss_pred cEEEcCCCCCCcccCEEEEEcCCcccceEEeeCCCCcCCCcccccccCCCceecCCHHHhcCCeEEEcCCCccEEEEEeC
Confidence 9999983 22 26665322 122332 12222211 11 122344443 4553 33 22 2 247899999
Q ss_pred CCCcEEEEEecCCCcEEEeCCccccccccCCCCCCCcCcEEEeccCcc--------------CCCeEeCCCCEEEEEEEE
Q 022000 233 ERKRTFVIHKEGLPDVVVWNPWERKSKSMADFGDEEYRHMLCVDGAAI--------------EKPITLKPGEEWTGRLEL 298 (304)
Q Consensus 233 ~~g~~i~i~~~~~~~~vvwtp~~~~~~~~~d~~~~~~~~~vCiEp~~~--------------~~~~~L~pGe~~~~~~~i 298 (304)
++++.|+|.++++|+++||+|...+ .+|||||||+. .+.++|+|||+++.+++|
T Consensus 224 ~~g~~l~v~~~~~p~l~iwt~~~~~------------~~~vciEP~tg~~Da~n~~~~~~~k~g~~~L~pGe~~~~~~~I 291 (294)
T 3q1n_A 224 HHDHSITLDISDFPYLTIWSPEHKK------------APFIAVEPFDGLPDQAGEPTDWYTKLGNTTLSAGANKQLALKV 291 (294)
T ss_dssp TCSCCEEEECTTCSEEEEECCTTSC------------CSEEEEEEEESCCCBSSSCCBTTTCTTCEEECTTCEEEEEEEE
T ss_pred CCCcEEEEEECCCCEEEEECcCCCC------------CCEEEEeCcCCCCCCCCCCCchhccCCCEEECCCCEEEEEEEE
Confidence 9999999999889999999985311 35999999961 147999999999999999
Q ss_pred EEE
Q 022000 299 SLV 301 (304)
Q Consensus 299 ~~~ 301 (304)
++.
T Consensus 292 ~i~ 294 (294)
T 3q1n_A 292 ELH 294 (294)
T ss_dssp EEC
T ss_pred EEC
Confidence 873
No 6
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus}
Probab=100.00 E-value=4.5e-43 Score=318.65 Aligned_cols=246 Identities=21% Similarity=0.362 Sum_probs=191.3
Q ss_pred EEEEeCCCccEEEEeCCCcEEEEEEeC-CCEEEEEcCCCCcCCCCCcccCcceEEccccCCCC-----------CCCCce
Q 022000 25 QVVLRNPRGASAKISLHGGQALSWRTE-RGEELLFTSTKAIFKPPHAVRGGIPICFPQFGNRG-----------SLEQHG 92 (304)
Q Consensus 25 ~~~L~n~~~~~~~v~~~Ga~l~s~~~~-~g~e~l~~~~~~~~~~~~~~rgG~p~lfP~~gr~~-----------~~~~HG 92 (304)
+++|+|+. ++|+|.++||+|+||+.+ +|.|+||..+.++|. +|+|+||||+||+. ++++||
T Consensus 2 ~~~l~n~~-~~~~i~~~GA~l~s~~~~~~~~e~l~~~~~~~~~------~~~pil~P~~nRi~~g~~~~~G~~y~l~~HG 74 (307)
T 3dcd_A 2 DYTIENNM-IKVVISDHGAEIQSVKSAHTDEEFMWQANPEIWG------RHAPVLFPIVGRLKNDEYTYKGKTYHLGQHG 74 (307)
T ss_dssp EEEEECSS-EEEEEETBTTEEEEEEETTTCCBCBCCCCTTTCC------CSSCEEBSCSSCCGGGEEEETTEEEECCTTB
T ss_pred EEEEECCC-EEEEEEccCcEEEEEEECCCCcEEEECCChhhcC------CCCcEEEeecCccCCCeEEECCEEEecCCCC
Confidence 58999995 999999999999999974 578999998887776 57899999999984 578999
Q ss_pred eEeecceEEeeCCCCCCCCCCCCceEEEEEecCCcchhccCCcceEEEEEEEEccCCcEEEEEEEEeCCCCcEeEeeecc
Q 022000 93 FARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLALISRIRNINCKPFSFSIAYH 172 (304)
Q Consensus 93 ~~~~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~~~~L~~~~~v~N~~~~~~p~~~g~H 172 (304)
|+|++.|++++.+ ..+|+|++.+++++.++|||+|+++++|+|.+ ++|+++++++|+++++|||++|+|
T Consensus 75 f~r~~~w~v~~~~----------~~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~~-~~L~i~~~v~N~g~~~~p~~~g~H 143 (307)
T 3dcd_A 75 FARNADFEVENHT----------KESITFLLKDNEETRKVYPFKFEFRVNYNLMN-NLLEENFSVVNKSDETMIFGVGGH 143 (307)
T ss_dssp SGGGSBCEEEEEE----------TTEEEEEEECCHHHHHHSCCCEEEEEEEEEET-TEEEEEEEEEECSSSCEEECEEEC
T ss_pred CccCcEEEEEEec----------CCEEEEEEecCcchhhhCCCceEEEEEEEEeC-CEEEEEEEEECCCCCcEeEEEEcC
Confidence 9999999998764 45799999988778899999999999999996 899999999999999999999999
Q ss_pred cceecCC-----cce--EEEecCCCCccee--cccccc------eeeecCceeeecC-Ccce---EEcCCC--CeEEEEe
Q 022000 173 TYFAISD-----ISE--VRIEGLETLDYLD--NLCQRE------RFTEQGDALTFES-EIDR---VYLSSS--DKIAILD 231 (304)
Q Consensus 173 pyF~~~~-----~~~--l~~~gl~~~~~ld--~~~~~~------~~~~~~~~~~~~~-~~D~---~y~~~~--~~~~l~~ 231 (304)
|||+++. +.+ |+|..- ..++ .++++. ........+.+.. .+|+ +|.... ..++|.+
T Consensus 144 pyF~~~~~~~~~~~d~~L~~~a~---~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~fd~da~~~~~~~~~~~v~l~~ 220 (307)
T 3dcd_A 144 PGFNLPTDHGENKEDFYFDMHPS---VTRVRIPLKDASLDWNNRSLAPTDSLIALSDDLFKDDALIYELRGNDNKVSLRT 220 (307)
T ss_dssp CEEECCCTTSCCGGGEEEEEESC---CCEEECCEETTEECGGGCEEECTTSCEECCSGGGTTSCEEEECCSSCEEEEEEE
T ss_pred cEEEcCCCCCCccccEEEEEcCC---CceeeeecCCcccccccccccccCCcccCCHHHcCCceEEEcCCCCceEEEEEe
Confidence 9999983 223 566431 1111 011110 0001122344443 3542 233332 4688999
Q ss_pred CCCCcEEEEEecCCCcEEEeCCccccccccCCCCCCCcCcEEEeccCcc--------------CCCeEeCCCCEEEEEEE
Q 022000 232 HERKRTFVIHKEGLPDVVVWNPWERKSKSMADFGDEEYRHMLCVDGAAI--------------EKPITLKPGEEWTGRLE 297 (304)
Q Consensus 232 ~~~g~~i~i~~~~~~~~vvwtp~~~~~~~~~d~~~~~~~~~vCiEp~~~--------------~~~~~L~pGe~~~~~~~ 297 (304)
+++++.|+|..++||+++||+|.... .+|||||||+. .+.++|+|||+++.+++
T Consensus 221 ~~~g~~v~v~~~~fp~l~iwt~~~~~------------~~fvciEP~tg~~Da~n~~~~~~~k~gl~~L~PGe~~~~~~~ 288 (307)
T 3dcd_A 221 DKNKFHVNVWTRDAPFVGIWSQYPKT------------DNYVCIEPWWGIADRDDADGDLEHKYGMNHLKPGKEFQAGFS 288 (307)
T ss_dssp TTSSCEEEEEEETCSEEEEECCSSSC------------CSEEEEEEEESCCCBTTCCSBGGGCTTCEEECTTCEEEEEEE
T ss_pred CCCCcEEEEEECCCCEEEEECcCCCC------------CCEEEEccccCCCCCCCCCCchhccCCCEEECCCCEEEEEEE
Confidence 99999999999889999999983211 35999999961 14799999999999999
Q ss_pred EEEEeC
Q 022000 298 LSLVHS 303 (304)
Q Consensus 298 i~~~~~ 303 (304)
|++...
T Consensus 289 i~~~~~ 294 (307)
T 3dcd_A 289 MTYHST 294 (307)
T ss_dssp EEEECS
T ss_pred EEEEEC
Confidence 998754
No 7
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis}
Probab=100.00 E-value=3.2e-43 Score=322.69 Aligned_cols=259 Identities=21% Similarity=0.300 Sum_probs=195.0
Q ss_pred cCCCceEEEEeCCCccEEEEe-CCCcEEEEEEeC-CCEEEEEcCCCC-cCCCCCcccCcceEEccccCCCC---------
Q 022000 19 DRNGIEQVVLRNPRGASAKIS-LHGGQALSWRTE-RGEELLFTSTKA-IFKPPHAVRGGIPICFPQFGNRG--------- 86 (304)
Q Consensus 19 ~~~g~~~~~L~n~~~~~~~v~-~~Ga~l~s~~~~-~g~e~l~~~~~~-~~~~~~~~rgG~p~lfP~~gr~~--------- 86 (304)
.++|++.++|+|+. ++|+|. .+||+|+||+.+ .|.++||..+.. .+. ..++++|+|+||| +||+.
T Consensus 10 ~~~g~~~~~L~n~~-~~~~i~p~~GA~l~s~~~~~~g~~~l~~~~~~~~~~-~~~~~~G~pv~~p-~nRi~~g~~~~~G~ 86 (326)
T 3mwx_A 10 TYLGTPAIKAGNEH-LEMIVVPEWGSNVISLVDKTTNVQLLREPETAESFH-DTPTLYGIPILFP-PNRISDGTFSFRGR 86 (326)
T ss_dssp EETTEEEEEEEESS-EEEEEETTTTTEEEEEEETTTTEECBCCCSSHHHHH-HCTTSSSCCEEBS-CSEEETTEEEETTE
T ss_pred EECCeEEEEEECCC-EEEEEchhcCCEEEEEEecCCCceEEccCcChhHhh-cCccccCceEcCC-CCcccCCEEEECCE
Confidence 47999999999995 999998 699999999984 478999986542 222 3467899999999 69873
Q ss_pred --CCC---------CceeEeecceEEeeCCCCCCCCCCCCceEEEEEec--CCcchhccCCcceEEEEEEEEccCCcEEE
Q 022000 87 --SLE---------QHGFARNRSWVIDDNPPPLKPSDSQGKVYVDLLLK--PSEEDLKIWPHSFEFRLRVSLAADGNLAL 153 (304)
Q Consensus 87 --~~~---------~HG~~~~~~W~v~~~~~~~~~~~~~~~~~v~l~l~--~~~~~~~~~P~~~~~~~~y~L~~~~~L~~ 153 (304)
+++ +|||+|++.|+|++.+ ++++..+|+|++. +.++++.+|||+|+++++|+|.+ ++|++
T Consensus 87 ~y~l~~N~~~~~~~lHG~~~~~~W~v~~~~------~~~~~~~v~~~~~~~~~~~~~~g~P~~~~~~v~y~L~~-~~L~i 159 (326)
T 3mwx_A 87 TYHFDINEKDKHNHLHGFLYHEKWNVVTTK------QTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIKE-NTLFK 159 (326)
T ss_dssp EEECCCCBTTTTEEESBSCTTSCCEEEEEE------EESSCEEEEEEEEGGGCHHHHHHSCSCEEEEEEEEEET-TEEEE
T ss_pred EEEccCCCCCCCccccCCccCCceEEEEee------ccCCceEEEEEEEeCCCCccccCCCceEEEEEEEEEcC-CcEEE
Confidence 233 6999999999998763 1112345666654 44446679999999999999997 79999
Q ss_pred EEEEEeCCCCcEeEeeecccceecCCcce--EEEec----------CCCCcceecccccceeeecCceeeecCCcceEEc
Q 022000 154 ISRIRNINCKPFSFSIAYHTYFAISDISE--VRIEG----------LETLDYLDNLCQRERFTEQGDALTFESEIDRVYL 221 (304)
Q Consensus 154 ~~~v~N~~~~~~p~~~g~HpyF~~~~~~~--l~~~g----------l~~~~~ld~~~~~~~~~~~~~~~~~~~~~D~~y~ 221 (304)
+++++|+++++|||++|+||||+++ +.+ |++.. +|++.+.+. .....+. ...+.+..++|++|+
T Consensus 160 ~~~~~N~~~~~~~~~~~~H~yFnl~-~~~~~l~~~a~~~~~~d~~~iptg~~~~~-~~~~~~~--~~~~~~~~~~D~~f~ 235 (326)
T 3mwx_A 160 HATVMNKGKEAFPWGIGYHTTFIFP-AESSLFSLTADQQWELDERLLPTGKLMDV-PYKEALH--EGMDLRHKQLDDVFL 235 (326)
T ss_dssp EEEEEECSSSCEEECCEECCCEECC-TTTEEEEESEEEEEEECTTSCEEEEEEEC-TTHHHHH--HCBCCTTCCCEEEEE
T ss_pred EEEEEECCCCceeeEEeeccccCCC-CCCEEEEEECCcEEEeCCccCCCCccccC-cchhhcc--cCcccCCccccceee
Confidence 9999999999999999999999997 444 44421 222222221 1111111 122334557899998
Q ss_pred CC------CCeEEEEeCCCCcEEEEEe-cCCCcEEEeCCccccccccCCCCCCCcCcEEEeccCcc-------------C
Q 022000 222 SS------SDKIAILDHERKRTFVIHK-EGLPDVVVWNPWERKSKSMADFGDEEYRHMLCVDGAAI-------------E 281 (304)
Q Consensus 222 ~~------~~~~~l~~~~~g~~i~i~~-~~~~~~vvwtp~~~~~~~~~d~~~~~~~~~vCiEp~~~-------------~ 281 (304)
.. ...++|.++.+++.|.|.. .++|+++||||+. +++|||||||+. .
T Consensus 236 ~~~~~~~~~~~~~l~~~~~g~~l~~~~~~~~p~~~vwt~~~-------------~~~~vclEP~~~~~da~n~~~~~~~~ 302 (326)
T 3mwx_A 236 SSYQKRGGENQAVIYHQHAHISIIYKADEQFKHWVVYNADG-------------KQGYLCPEPYTWVTNAVNLDLPSSLT 302 (326)
T ss_dssp ESHHHHCSCCEEEEEETTTTEEEEEEECTTCCEEEEECTTS-------------CSSEEEEEEESSCTTGGGCCSCHHHH
T ss_pred eccccCCCceEEEEEeCCCCEEEEEEeCCCCCEEEEECCCC-------------CCCEEEECCccCCCCccccCCCcccc
Confidence 65 2478999999999999987 4799999999863 235999999972 2
Q ss_pred CCeEeCCCCEEEEEEEEEEEeCC
Q 022000 282 KPITLKPGEEWTGRLELSLVHSS 304 (304)
Q Consensus 282 ~~~~L~pGe~~~~~~~i~~~~~~ 304 (304)
+.++|+|||+++.+++|++...+
T Consensus 303 g~~~L~PGe~~~~~~~i~~~~~~ 325 (326)
T 3mwx_A 303 GLQVLEPGEETTAKSSITIELNH 325 (326)
T ss_dssp CCEEECTTCEEEEEEEEEEEEC-
T ss_pred CCeEECCCCeEEEEEEEEEEecC
Confidence 46899999999999999998653
No 8
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli}
Probab=100.00 E-value=3e-42 Score=311.08 Aligned_cols=246 Identities=16% Similarity=0.210 Sum_probs=194.4
Q ss_pred CceEEEEeCCCccEEEEeCC-CcEEEEEEeCCCEEEEEcCCCCcCCCCCcccCcceEEccccCCCC--------------
Q 022000 22 GIEQVVLRNPRGASAKISLH-GGQALSWRTERGEELLFTSTKAIFKPPHAVRGGIPICFPQFGNRG-------------- 86 (304)
Q Consensus 22 g~~~~~L~n~~~~~~~v~~~-Ga~l~s~~~~~g~e~l~~~~~~~~~~~~~~rgG~p~lfP~~gr~~-------------- 86 (304)
|++.++|+|+ +++|+|.++ ||+|+|| . +|+|+||..+.+ ..++++|.|+||||+||+.
T Consensus 1 g~~~~~l~n~-~~~~~i~~~~Ga~l~s~-~-~g~~vl~~~~~~----~~~~~~~g~~l~p~~nRi~~g~~~~~G~~y~l~ 73 (291)
T 3nre_A 1 GMTIYTLSHG-SLKLDVSDQGGVIEGFW-R-DTTPLLRPGKKS----GVATDASCFPLVPFANRVSGNRFVWQGREYQLQ 73 (291)
T ss_dssp CCCEEEEEET-TEEEEEETBTTEEEEEE-E-TTEESSCCCCCS----SCGGGSSEEEEBSCCSBCGGGEEEETTEEEECC
T ss_pred CccEEEEcCC-CEEEEEEcccCceEEEE-e-CCCEEEECCCcc----cCccccCCcEEEeeCCEecCCEEEECCEEEECC
Confidence 6789999999 599999995 9999999 5 689999877632 3567889999999999984
Q ss_pred ------CCCCceeEeecceEEeeCCCCCCCCCCCCceEEEEEecCCcchhccCCcceEEEEEEEEccCCcEEEEEEEEeC
Q 022000 87 ------SLEQHGFARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLALISRIRNI 160 (304)
Q Consensus 87 ------~~~~HG~~~~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~~~~L~~~~~v~N~ 160 (304)
.+++|||+|++.|++++.+ ..+|+|++.++ . |||+|+++++|+|.+ ++|+++|+++|+
T Consensus 74 ~N~~~~~~~~HG~~~~~~W~~~~~~----------~~~v~l~l~~~----~-~P~~~~~~v~y~L~~-~~L~i~~~~~N~ 137 (291)
T 3nre_A 74 PNVEWDAHYLHGDGWLGEWQCVSHS----------DDSLCLVYEHR----S-GVYHYRVSQAFHLTA-DTLTVTLSVTNQ 137 (291)
T ss_dssp CCSTTCSSCBSBSGGGSBCEEEEEC----------SSEEEEEEEEE----S-SSCEEEEEEEEEECS-SEEEEEEEEEEC
T ss_pred CCCCCCCCCCCCchhcceeEEEEcc----------CCEEEEEEeCC----C-CCceEEEEEEEEEeC-CeEEEEEEEEEC
Confidence 2469999999999998764 34688888752 5 999999999999997 899999999999
Q ss_pred CCCcEeEeeecccceecCCcceEEEecCCCCccee----cccccceeeecCceeee------c-CCcceEEcCCCCeEEE
Q 022000 161 NCKPFSFSIAYHTYFAISDISEVRIEGLETLDYLD----NLCQRERFTEQGDALTF------E-SEIDRVYLSSSDKIAI 229 (304)
Q Consensus 161 ~~~~~p~~~g~HpyF~~~~~~~l~~~gl~~~~~ld----~~~~~~~~~~~~~~~~~------~-~~~D~~y~~~~~~~~l 229 (304)
++++|||++|+||||++++...|++.+ ..|++ .+++++.. .....++| . .++|++|+.....++|
T Consensus 138 ~~~~~~~~~~~H~YFnl~~~~~l~i~a---~~~~~~d~~~iPtg~~~-v~~t~~df~~~~~l~~~~~D~~f~~~~~~a~l 213 (291)
T 3nre_A 138 GAETLPFGTGWHPYFPLSPQTRIQAQA---SGYWLEREQWLAGEFCE-QLPQELDFNQPAPLPRQWVNNGFAGWNGQARI 213 (291)
T ss_dssp SSSCEEECCEEEEEEECCTTCEEEECC---SEEEEECGGGCEEEEES-SCCGGGCCSSCEECCSSCEEEEEESCCSEEEE
T ss_pred CCCCccceEEcCccEecCCCeEEEEEC---CEEEEcCCCcCCCcccc-CCCCcccccCCcCCCCccccceeecCCccEEE
Confidence 999999999999999999866677653 34443 23333211 11222333 2 3799999987778999
Q ss_pred EeCCCCcEEEEEecCCCc--EEEeCCccccccccCCCCCCCcC-cEEEeccCc-c----C-----CCeEeCCCCEEEEEE
Q 022000 230 LDHERKRTFVIHKEGLPD--VVVWNPWERKSKSMADFGDEEYR-HMLCVDGAA-I----E-----KPITLKPGEEWTGRL 296 (304)
Q Consensus 230 ~~~~~g~~i~i~~~~~~~--~vvwtp~~~~~~~~~d~~~~~~~-~~vCiEp~~-~----~-----~~~~L~pGe~~~~~~ 296 (304)
.++.++++|+|.++ .|. +|||||+... +..|+ .|||||||+ . + +.++|+|||+++.++
T Consensus 214 ~~~~~g~~l~v~t~-~p~~~~~vyt~~~~~--------~~~~~~~~vclEp~~~~pda~n~~~~~~~~~L~PGe~~~~~~ 284 (291)
T 3nre_A 214 EQPQEGYAIIMETT-PPAPCYFIFVSDPAF--------DKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEM 284 (291)
T ss_dssp EEGGGTEEEEEEEE-SCCSEEEEEECCTTT--------CTTCCSCEEEEEEESSCTTGGGSGGGTTCEEECTTCEEEEEE
T ss_pred EECCCCeEEEEEeC-CCCceEEEEcCCCCC--------CCCccCCEEEEcCccCCCCCCcCCCCCCCEEECCCCEEEEEE
Confidence 99999999999997 344 8999997211 12344 799999996 2 2 469999999999999
Q ss_pred EEEEEeC
Q 022000 297 ELSLVHS 303 (304)
Q Consensus 297 ~i~~~~~ 303 (304)
+|++..+
T Consensus 285 ~~~~~~~ 291 (291)
T 3nre_A 285 SLRVEWL 291 (291)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 9998763
No 9
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.5e-42 Score=319.84 Aligned_cols=261 Identities=22% Similarity=0.397 Sum_probs=196.0
Q ss_pred ecCCCceEEEEeCCCccEEEEe-CCCcEEEEEEeC-CCEEEEEcCCC----CcCCCCCcccCcceEEccccCCCC-----
Q 022000 18 KDRNGIEQVVLRNPRGASAKIS-LHGGQALSWRTE-RGEELLFTSTK----AIFKPPHAVRGGIPICFPQFGNRG----- 86 (304)
Q Consensus 18 ~~~~g~~~~~L~n~~~~~~~v~-~~Ga~l~s~~~~-~g~e~l~~~~~----~~~~~~~~~rgG~p~lfP~~gr~~----- 86 (304)
.+++|++.++|+|+ +++|+|. .+||+|+||+.+ +|+++||..+. +.|. ..++++|+|+||| +||+.
T Consensus 13 ~~~~g~~~~~L~n~-~~~~~i~p~~Ga~l~s~~~~~~g~~~l~~~~~~~~~~~y~-~~~~~~G~pv~~p-~nRi~~g~f~ 89 (341)
T 3os7_A 13 IIWSEHKCIRFAAG-GYEALIIPDVGGNVVELKDTNKGVTILRTPKKDLKFEDFK-NRPQVYGLPVLFP-PNRIDDGTFK 89 (341)
T ss_dssp EETTTEEEEEEEET-TEEEEEETTTTTEEEEEEETTTTEECBCCCCTTCCHHHHH-HSGGGSSCCEESS-CSEEETTEEE
T ss_pred EEECCEEEEEEeCC-CEEEEEchhcCCEEEEEEeCCCCCeEEEcCCcccchhhhh-hCCcccceeEeCC-CCcccCCEEE
Confidence 35899999999999 5999986 899999999985 37999998765 2333 3578899999999 58863
Q ss_pred ------CC---------CCceeEeecceEEeeCCCCCCCCCCCCceEEEEEe--cCCcchhccCCcceEEEEEEEEccCC
Q 022000 87 ------SL---------EQHGFARNRSWVIDDNPPPLKPSDSQGKVYVDLLL--KPSEEDLKIWPHSFEFRLRVSLAADG 149 (304)
Q Consensus 87 ------~~---------~~HG~~~~~~W~v~~~~~~~~~~~~~~~~~v~l~l--~~~~~~~~~~P~~~~~~~~y~L~~~~ 149 (304)
++ ++|||+|++.|+|++.+ ++++..+|+|++ .+.++++++|||+|+++++|+|.+ +
T Consensus 90 ~~G~~y~l~~N~~~~~~~lHG~~~~~~W~v~~~~------~~~~~~~v~~~~~~~d~~~~~~g~P~~~~~~v~y~L~~-~ 162 (341)
T 3os7_A 90 LGDKTYKFPINEAKNNNYIHGFIKNSKWTVHKKK------IDQDKALVEVVFDFTKENEAYKYFSHEFQFKLSYELSS-K 162 (341)
T ss_dssp ETTEEEECCCSBTTTTEEESCSGGGSCCEEEEEE------EETTEEEEEEEEEECTTSTTTTTSCCCEEEEEEEEEET-T
T ss_pred ECCEEEEccCCCCCCCcCccCCcccCcEEEEEee------cCCCccEEEEEEEeCCCcchhhcCCceEEEEEEEEEeC-C
Confidence 22 37999999999998763 112244565544 445556679999999999999997 7
Q ss_pred cEEEEEEEEeCCCCcEeEeeecccceecCC-----cceEEEecCCCCccee----cccccceeee--------cCceeee
Q 022000 150 NLALISRIRNINCKPFSFSIAYHTYFAISD-----ISEVRIEGLETLDYLD----NLCQRERFTE--------QGDALTF 212 (304)
Q Consensus 150 ~L~~~~~v~N~~~~~~p~~~g~HpyF~~~~-----~~~l~~~gl~~~~~ld----~~~~~~~~~~--------~~~~~~~ 212 (304)
+|+++++++|+++++|||++|+||||+++. +.+.+|. ++...+++ .+++++.... ....+.+
T Consensus 163 ~L~i~~~~~N~~~~~~p~~~~~H~yF~l~~~~~~~~~~~~l~-~~a~~~~~~d~~~iPtG~~~~v~~~~~df~~~~~~~~ 241 (341)
T 3os7_A 163 GLKQTTSVVNLSSEEMPLSVGYHSAFNVPFIEGSEDSNCRVK-ISIDKFWKQDSRNLPTGESFAPTGEQKEYLENGVAVA 241 (341)
T ss_dssp EEEEEEEEEECSSSCEEECCEECCEEESSCBTTCCGGGEEEE-ECEEEEEEECTTSCEEEEEECCCGGGGGGGTTCBCTT
T ss_pred eEEEEEEEEeCCCCcEEEEEecCceeecCCCCCCCcccEEEE-EeCCcEEecCcccCCCCccccCCCccchhhcCCcccC
Confidence 999999999999999999999999999982 3443333 12223331 1222211100 1122333
Q ss_pred cCCcceEEcCC----C----CeEEEEeCCCCcEEEEEec-CCCcEEEeCCccccccccCCCCCCCcCcEEEeccCcc---
Q 022000 213 ESEIDRVYLSS----S----DKIAILDHERKRTFVIHKE-GLPDVVVWNPWERKSKSMADFGDEEYRHMLCVDGAAI--- 280 (304)
Q Consensus 213 ~~~~D~~y~~~----~----~~~~l~~~~~g~~i~i~~~-~~~~~vvwtp~~~~~~~~~d~~~~~~~~~vCiEp~~~--- 280 (304)
..++|++|..+ . ..++|.++.+++.|+|.++ ++|++|||||+.. ++|||||||+.
T Consensus 242 ~~~~D~~f~~~~~~~~g~~~~~~~l~~~~~g~~l~v~~~~~~p~~~vwt~~~~-------------~~~vclEP~~~~pD 308 (341)
T 3os7_A 242 SHPIESLFSLKDIDVNGKTFRGACIEDASKNTRVVYEMSSEYKYLVIWNDMGD-------------KKYACIEPQTSIIN 308 (341)
T ss_dssp SSCCEEEEEECCEEETTEEECEEEEEEGGGTEEEEEEECTTCCEEEEECGGGC-------------SSEEEEEEESSCTT
T ss_pred CcchhhhccccccccCCCcceEEEEEeCCCCeEEEEEeCCCCCEEEEEcCCCC-------------CCEEEECCccCCCC
Confidence 45899999864 2 3588999999999999994 7999999998631 35999999961
Q ss_pred ----------CCCeEeCCCCEEEEEEEEEEEe
Q 022000 281 ----------EKPITLKPGEEWTGRLELSLVH 302 (304)
Q Consensus 281 ----------~~~~~L~pGe~~~~~~~i~~~~ 302 (304)
.+.++|+|||+++.+++|+++.
T Consensus 309 a~n~~~~~~~~g~~~L~PGe~~~~~~~i~v~~ 340 (341)
T 3os7_A 309 SPNVKLDRSVSGFKTLKPNESWSGVCKLYIEN 340 (341)
T ss_dssp GGGCSSCHHHHCCEEECTTCEEEEEEEEEEEE
T ss_pred ccCCCCcccccCceEECCCCEEEEEEEEEEEe
Confidence 1469999999999999999875
No 10
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-40 Score=303.33 Aligned_cols=264 Identities=13% Similarity=0.195 Sum_probs=192.2
Q ss_pred cCCCceEEEEeCCCccEEEEeCCCcEEEEEEeCCCEEEEE-cCCCCcCCCCCcccCcceEEccccCCCC-----------
Q 022000 19 DRNGIEQVVLRNPRGASAKISLHGGQALSWRTERGEELLF-TSTKAIFKPPHAVRGGIPICFPQFGNRG----------- 86 (304)
Q Consensus 19 ~~~g~~~~~L~n~~~~~~~v~~~Ga~l~s~~~~~g~e~l~-~~~~~~~~~~~~~rgG~p~lfP~~gr~~----------- 86 (304)
+.+++..++|+|+++++|+|.++||+|+||+.+ |+++|| .++.+.|....+++ |. +++||+||+.
T Consensus 6 ~~~~~~~~~l~n~~~~~~~i~~~GA~l~s~~~~-g~~vl~~~~~~~~y~~~~~~~-G~-~l~p~~nRi~~g~f~~~G~~y 82 (342)
T 1yga_A 6 GDNKYGVITIGDEKKFQATIAPLGATLVDLKVN-GQSVVQGYSNVQDYLTDGNMM-GA-TVGRYANRIAKGVFSLDDGPH 82 (342)
T ss_dssp -CCTTCCEEEEETTTEEEEEETBTTEEEEEEET-TEECBCCCSSGGGGTTCSSCT-TC-EECSBCSEEGGGEEEETTEEE
T ss_pred CCceEEEEEEECCCCEEEEEECCCCEEEEEEEC-CeeEEecCCChHHhccCCCeE-cc-EECCCCCceeCCEEEECCEEE
Confidence 456788999999756999999999999999984 789886 55556665555555 43 5679999984
Q ss_pred CC-------CCceeE---eecceEEeeCCCCCCCCCCCCceEEEEEecCC--cchhccCCcceEEEEEEEEcc-CCcEEE
Q 022000 87 SL-------EQHGFA---RNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPS--EEDLKIWPHSFEFRLRVSLAA-DGNLAL 153 (304)
Q Consensus 87 ~~-------~~HG~~---~~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~--~~~~~~~P~~~~~~~~y~L~~-~~~L~~ 153 (304)
++ ++|||+ +++.|++++... .+++..+|+|++.++ +++++.|||+|+++++|+|.+ +++|+|
T Consensus 83 ~l~~n~~~~~lHG~~~g~~~~~W~v~~~~~-----~~~~~~~v~l~l~~~~~~~g~~~yP~~~~~~vty~L~~~~~~L~i 157 (342)
T 1yga_A 83 KLTVNNCGNTNHSSISSLNLKQYKASPVEN-----PSKGVYVVEFKLLDDHTQPNPNEFPGDLEVTVKYTLNVAEMTLDM 157 (342)
T ss_dssp ECCCCBTTBEETTGGGCGGGSBCEECCCEE-----EETTEEEEEEEEEECSSSSSCCCSSSEEEEEEEEEEETTTTEEEE
T ss_pred EcCCCCCCcccCCCccccCcceeeeEEeec-----cCCCCCEEEEEEECCcccCCCcCCCeEEEEEEEEEEeCCCCEEEE
Confidence 23 469999 589999976410 000256788888874 333444999999999999983 378999
Q ss_pred EEEEEeCCCCcEeEeeecccceecCC------cceEEEecCCCCccee--c---ccccceeeecCce------eeecC--
Q 022000 154 ISRIRNINCKPFSFSIAYHTYFAISD------ISEVRIEGLETLDYLD--N---LCQRERFTEQGDA------LTFES-- 214 (304)
Q Consensus 154 ~~~v~N~~~~~~p~~~g~HpyF~~~~------~~~l~~~gl~~~~~ld--~---~~~~~~~~~~~~~------~~~~~-- 214 (304)
+|+++|+++++|||++|+||||+++. +.+.+|. ++...|++ . +++++........ ..+..
T Consensus 158 ~~~~~N~~d~~~p~~~~~H~YFnl~~~~~~~~i~~~~l~-l~a~~~~~~d~~~~iPtg~~~~v~~~~~df~~~~~l~~~~ 236 (342)
T 1yga_A 158 EYQAQLVRGDATPINMTNHSYFNLNKVKSEKSIRGTEVK-VCSNKSLEVTEGALLPTGKIIERNIATFDSTKPTVLHEDT 236 (342)
T ss_dssp EEEEEEEESSEEECBCEECCCBCTTTTTCTTCCTTEEEE-ESCCEEEEECTTTCCEEEEEEECSCCBTTCSSCEEECSSC
T ss_pred EEEEEeCCCCceEEeeeccceEEcCCCCCCCcccceEEE-EeCCeEEEECCCCCCcCCCeEecCCCcccccCCeecCccc
Confidence 99999999999999999999999982 3454554 44455553 1 3333211111112 22332
Q ss_pred -CcceEEcCCC----------------CeEEEEeCCCCcEEEEEecCCCcEEEeCCccccccccCCCCCCCc--CcEEEe
Q 022000 215 -EIDRVYLSSS----------------DKIAILDHERKRTFVIHKEGLPDVVVWNPWERKSKSMADFGDEEY--RHMLCV 275 (304)
Q Consensus 215 -~~D~~y~~~~----------------~~~~l~~~~~g~~i~i~~~~~~~~vvwtp~~~~~~~~~d~~~~~~--~~~vCi 275 (304)
++|++|+... ..++|.++.+++.|+|.++ +|++|||||+.. +++| +.||||
T Consensus 237 ~~~D~~f~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~g~~l~v~~~-~p~~~vyt~~~~---------~~~y~~~~~vcl 306 (342)
T 1yga_A 237 PVFDCTFIIDANKDLKTTDSVSVNKLVPVFKAYHPESHIKFEVSTT-EPTVHLYTGDNL---------CGKFVPRSGFAV 306 (342)
T ss_dssp CCCEEEEECTTTTTCCSSBCTTTSCCEEEEEEECTTTCCEEEEEES-SSEEEEECCTTC---------CTTSCTTSCBEE
T ss_pred CCCCcEEEeCCCccccccccccccccceEEEEEeCCCCeEEEEEeC-CCEEEEECCCCc---------cccCCCCCEEEE
Confidence 6999998653 3578889999999999998 999999998631 1223 579999
Q ss_pred ccCcc----C-----CCeEeCCCCEEEEEEEEEEE
Q 022000 276 DGAAI----E-----KPITLKPGEEWTGRLELSLV 301 (304)
Q Consensus 276 Ep~~~----~-----~~~~L~pGe~~~~~~~i~~~ 301 (304)
|||.. + +.++|+|||+++.+++|++.
T Consensus 307 Ep~~~pda~n~~~~~~~~~L~pGe~~~~~~~~~f~ 341 (342)
T 1yga_A 307 QQGRYVDAINRDEWRGCVLLKRGEVYTSKTQYKFD 341 (342)
T ss_dssp EEESCSSGGGCHHHHGGGEEETTCCEEEEEEEEEE
T ss_pred ECCCCCCcccCCCCCCCeEECCCCEEEEEEEEEEE
Confidence 99862 1 23899999999999999874
No 11
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A*
Probab=100.00 E-value=4.9e-39 Score=296.80 Aligned_cols=257 Identities=16% Similarity=0.233 Sum_probs=185.3
Q ss_pred CceEEEEeCCCccEEEEeCCCcEEEEEEe--CCCE--EEEE-cCCCCcCCCCCcccCcceEEccccCCCC----------
Q 022000 22 GIEQVVLRNPRGASAKISLHGGQALSWRT--ERGE--ELLF-TSTKAIFKPPHAVRGGIPICFPQFGNRG---------- 86 (304)
Q Consensus 22 g~~~~~L~n~~~~~~~v~~~Ga~l~s~~~--~~g~--e~l~-~~~~~~~~~~~~~rgG~p~lfP~~gr~~---------- 86 (304)
++..++|+|+ +++|+|.++||+|+||+. ++|. ++|| .++.+.|....+++ |. +||||+||+.
T Consensus 20 ~~~~~~L~n~-~~~~~i~~~GA~l~s~~~~~~~G~~~~vv~g~~~~~~y~~~~~~~-G~-~l~p~~nRi~~g~f~~~G~~ 96 (344)
T 1snz_A 20 TVEKFQLQSD-LLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYF-GA-VIGRVANRIAKGTFKVDGKE 96 (344)
T ss_dssp EEEEEEEECS-SCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHSSCSCT-TC-EECSBCSEEGGGEEEETTEE
T ss_pred EEEEEEEEcC-CEEEEEecCCcEEEEEEecCCCCCEeeEEECCCChHHHhhCCCce-ee-EecCcCCcccCCEEEECCEE
Confidence 4889999999 699999999999999986 3353 8887 44444454444554 54 7999999984
Q ss_pred -CC-------CCceeEe---ecceEEeeCCCCCCCCCCCCceEEEEEecCCcchhccCCcceEEEEEEEEccCCcEEEEE
Q 022000 87 -SL-------EQHGFAR---NRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLALIS 155 (304)
Q Consensus 87 -~~-------~~HG~~~---~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~~~~L~~~~ 155 (304)
++ ++|||++ ++.|++++.+ .+|+|++.+++ +.++|||+|+++++|+|.+ ++|+|+|
T Consensus 97 y~L~~N~~~~~lHG~~~g~~~~~W~v~~~~-----------~~v~l~l~~~~-~~~gyP~~~~~~vty~L~~-~~L~i~~ 163 (344)
T 1snz_A 97 YHLAINKEPNSLHGGVRGFDKVLWTPRVLS-----------NGVQFSRISPD-GEEGYPGELKVWVTYTLDG-GELIVNY 163 (344)
T ss_dssp EECCCTBTTBEETTSSSCGGGSBCEEEEET-----------TEEEEEEEECT-TGGGCCSCEEEEEEEEEET-TEEEEEE
T ss_pred EECCCCCCCcccCCCccccccceeeEEEeC-----------CEEEEEEECCC-cCCCCCEEEEEEEEEEEcC-CEEEEEE
Confidence 23 4999995 8999998651 24888888755 5789999999999999997 5999999
Q ss_pred EEEeCCCCcEeEeeecccceecCC-----cce--EEEecCCCCccee----cccccceeeecCceeeec-----------
Q 022000 156 RIRNINCKPFSFSIAYHTYFAISD-----ISE--VRIEGLETLDYLD----NLCQRERFTEQGDALTFE----------- 213 (304)
Q Consensus 156 ~v~N~~~~~~p~~~g~HpyF~~~~-----~~~--l~~~gl~~~~~ld----~~~~~~~~~~~~~~~~~~----------- 213 (304)
+++| +++|||++|+||||+++. +.+ |++. ...|++ .+++++........++|.
T Consensus 164 ~a~~--d~~~p~~~~~H~YFnl~~~~~~~i~~~~L~i~---a~~~~~~d~~~iPtg~~~~v~~t~~df~~~~~l~~~~~~ 238 (344)
T 1snz_A 164 RAQA--SQATPVNLTNHSYFNLAGQASPNINDHEVTIE---ADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQD 238 (344)
T ss_dssp EEEE--SSCEECBCEECCCBCTTCTTCSCCTTCEEEEC---EEEECCBCTTSCBCSCCEECTTSTTCCSSCEEHHHHHHH
T ss_pred EEEe--CCceEEeccccceEecCCCCCCcccCEEEEEE---CCeEEEeCCCCcccCceecCCCCcccccCCcCcChhhcc
Confidence 9987 899999999999999984 333 4443 223332 122222111111112222
Q ss_pred ---CCcceEEcCCC-----CeEEEEeCCCCcEEEEEecCCCcEEEeCCccccccccCCCCCCCc--CcEEEeccCccC--
Q 022000 214 ---SEIDRVYLSSS-----DKIAILDHERKRTFVIHKEGLPDVVVWNPWERKSKSMADFGDEEY--RHMLCVDGAAIE-- 281 (304)
Q Consensus 214 ---~~~D~~y~~~~-----~~~~l~~~~~g~~i~i~~~~~~~~vvwtp~~~~~~~~~d~~~~~~--~~~vCiEp~~~~-- 281 (304)
.++|++|+... ..++|.++.+++.|+|.++ +|++|||||+.... .+.++.+..| +.|||||||...
T Consensus 239 ~~~~g~D~~f~~~~~~~~~~~a~l~~~~sg~~l~v~t~-~p~~~vyt~~~~~~-~~~~~~~~~y~~~~~vclEp~~~pda 316 (344)
T 1snz_A 239 FHLNGFDHNFCLKGSKEKHFCARVHHAASGRVLEVYTT-QPGVQFYTGNFLDG-TLKGKNGAVYPKHSGFCLETQNWPDA 316 (344)
T ss_dssp TTCCCCEEEEEECCCSSCEEEEEEEETTTTEEEEEEES-SSEEEEECCTTCEE-EEECGGGCEEETTSCBEEEEESCTTG
T ss_pred cccCCCCeEEEccCCCCCceEEEEEeCCCCcEEEEEeC-CCeEEEECCCCCCc-cccCCCCcccCCCCEEEEeCcCCCCc
Confidence 24899997642 2578999999999999998 99999999842111 0111112222 579999999631
Q ss_pred ------CCeEeCCCCEEEEEEEEEEE
Q 022000 282 ------KPITLKPGEEWTGRLELSLV 301 (304)
Q Consensus 282 ------~~~~L~pGe~~~~~~~i~~~ 301 (304)
..++|+|||+++.+++|++.
T Consensus 317 ~n~~~~~~~~L~pGe~~~~~~~~~f~ 342 (344)
T 1snz_A 317 VNQPRFPPVLLRPGEEYDHTTWFKFS 342 (344)
T ss_dssp GGCTTSCCCEECTTSCEEEEEEEEEE
T ss_pred ccCCCCCCeEECCCCEEEEEEEEEEE
Confidence 35899999999999999885
No 12
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4
Probab=100.00 E-value=5.6e-37 Score=282.36 Aligned_cols=257 Identities=12% Similarity=0.188 Sum_probs=182.8
Q ss_pred CceEEEEeCCCccEEEEeCCCcEEEEEEe--CCC--EEEEEcCCC-C-cCCCCCcccCcceEEccccCCCC---------
Q 022000 22 GIEQVVLRNPRGASAKISLHGGQALSWRT--ERG--EELLFTSTK-A-IFKPPHAVRGGIPICFPQFGNRG--------- 86 (304)
Q Consensus 22 g~~~~~L~n~~~~~~~v~~~Ga~l~s~~~--~~g--~e~l~~~~~-~-~~~~~~~~rgG~p~lfP~~gr~~--------- 86 (304)
.+..++|+++ +++|+|.++||+|+||+. ++| +++||..+. + ++. ..+.+ | ++++||.||++
T Consensus 12 ~~~~~~L~~~-~~~~~i~~~GA~l~sl~~~d~~G~~~dvvl~~~~~~~y~~-~~~~~-G-~~lgp~anRI~~g~f~~~G~ 87 (339)
T 1lur_A 12 SGFIEIANKQ-GLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDEFEK-DAASI-G-KTVGRVANRIKNSTLHFDGK 87 (339)
T ss_dssp CCCEEEECSS-SCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHH-CSSCT-T-CEECSBCSEEGGGEEEETTE
T ss_pred eeEEEEEeCC-CEEEEEecCCcEEEEEEEECCCCCEeEEEEcCCChHHhcc-CCCcc-c-cEecCcCCeecCCEEEECCE
Confidence 4678999554 699999999999999987 346 789887543 4 343 33433 3 46789999984
Q ss_pred --CCC-------CceeE---eecceEEeeCCCCCCCCCCCCceEEEEEecCCcchhccCCcceEEEEEEEEccCCcEEEE
Q 022000 87 --SLE-------QHGFA---RNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLALI 154 (304)
Q Consensus 87 --~~~-------~HG~~---~~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~~~~L~~~ 154 (304)
+++ +||++ +++.|++++.+ ..+|+|++.+++ +.++|||+|+++++|+|.++++|+|+
T Consensus 88 ~y~L~~N~~~n~lHGg~~g~~~~~W~v~~~~----------~~~v~l~l~s~d-~~~gyPg~~~~~vtY~L~~~~~L~i~ 156 (339)
T 1lur_A 88 QYTMTPNNGPHYLHGGPNGLGYRKWEVVRHA----------PESVSFSVRANE-QDDGLPGDAKIDVTYTVNDRNQLIIE 156 (339)
T ss_dssp EEECCCSBTTBEETTCTTSGGGSBCEEEEEE----------TTEEEEEEEEEH-HHHSSSSEEEEEEEEEECTTSEEEEE
T ss_pred EEECCCCCCCcccCCCCcccccceeeEEEcc----------CCEEEEEEECCC-cCCCCCeEEEEEEEEEECCCCeEEEE
Confidence 233 99999 48899998753 346889988754 67899999999999999854899999
Q ss_pred EEEEeCCCCcEeEeeecccceecCC---cce--EEEecCCCCccee----cccccceeeecC------ceeeecC-----
Q 022000 155 SRIRNINCKPFSFSIAYHTYFAISD---ISE--VRIEGLETLDYLD----NLCQRERFTEQG------DALTFES----- 214 (304)
Q Consensus 155 ~~v~N~~~~~~p~~~g~HpyF~~~~---~~~--l~~~gl~~~~~ld----~~~~~~~~~~~~------~~~~~~~----- 214 (304)
|++ +++++|||++|+||||+++. +.+ |+|. ...+++ .+++++...... ....+..
T Consensus 157 ~~a--~~d~~tp~~lg~HpYFnl~~~~~i~~~~L~i~---a~~~~~~d~~~iPtg~~~~v~~t~~Df~~~~~l~~~~~~~ 231 (339)
T 1lur_A 157 HHA--TCDTPGLLALTNHAYWNLDGSDTVAEHFLEME---ADEFVEVDDTFCPTGAIRSVTDTGFDFRSGKQLKESGKDA 231 (339)
T ss_dssp EEE--ECSSCEECBCEECCEECSSCCSCSTTCEEEEC---EEEEEEECTTSCEEEEEEECTTSTTCCTTCEETTCSCCCS
T ss_pred EEE--eCCCCeEEeeeccceEECCCCCcccCEEEEEE---CCEEEEeCCCCccCCCEEccCCCcccccCceecCchhccc
Confidence 998 68999999999999999984 343 4443 223332 122221111000 1122222
Q ss_pred ----CcceEEcCC---C-----CeEEEEeCCCCcEEEEEecCCCcEEEeCCccccccccCCCCCCC--cCcEEEeccCcc
Q 022000 215 ----EIDRVYLSS---S-----DKIAILDHERKRTFVIHKEGLPDVVVWNPWERKSKSMADFGDEE--YRHMLCVDGAAI 280 (304)
Q Consensus 215 ----~~D~~y~~~---~-----~~~~l~~~~~g~~i~i~~~~~~~~vvwtp~~~~~~~~~d~~~~~--~~~~vCiEp~~~ 280 (304)
++|++|+.. . ..++|.++.+++.|+|.++ +|++|||||+....+ + ..+.. .+.|||||||+.
T Consensus 232 ~~~~~~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t~-~p~~~vyt~~~~~~~--g-~~g~~y~~~~~vclEp~~~ 307 (339)
T 1lur_A 232 EELLDLDNDLVITKKTPPSTPSTYLRFWSEKSGIELSITTS-YPVIHLYASKFLDCK--G-KKGEHYKANKALAIEPQFH 307 (339)
T ss_dssp SCCCCCEEEEEECCCCC----CCCEEEECTTTCEEEEEEES-SSEEEEECCTTCCEE--C-GGGCEECTTCCEEEEEESC
T ss_pred ccCCCCccEEEeCCCCCCcccceEEEEEECCCCcEEEEEeC-CCEEEEECCCCcccc--C-CCCcccCCCCEEEEeccCC
Confidence 799999753 2 3588999999999999998 999999998521000 0 00011 246999999983
Q ss_pred ----C----CCeEeCCCCEEEEEEEEEEEe
Q 022000 281 ----E----KPITLKPGEEWTGRLELSLVH 302 (304)
Q Consensus 281 ----~----~~~~L~pGe~~~~~~~i~~~~ 302 (304)
+ ..++|+|||+++.+++|++.-
T Consensus 308 pDa~n~~~~~~~~L~pGe~~~~~~~~~f~~ 337 (339)
T 1lur_A 308 SAAPNFDHFPDVSLRPGDHYCQEIVYTFSH 337 (339)
T ss_dssp TTGGGCTTSCCCEECTTCCEEEEEEEEEEE
T ss_pred CCccCCCCCCCeEECCCCEEEEEEEEEEEE
Confidence 1 248999999999999998853
No 13
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A*
Probab=100.00 E-value=7.8e-37 Score=282.03 Aligned_cols=261 Identities=16% Similarity=0.269 Sum_probs=183.7
Q ss_pred CceEEEEeCCCccEEEEeCCCcEEEEEEeCCCEEEEEcC-CCCcCCCCCcccCcceEEccccCCCC-----------CCC
Q 022000 22 GIEQVVLRNPRGASAKISLHGGQALSWRTERGEELLFTS-TKAIFKPPHAVRGGIPICFPQFGNRG-----------SLE 89 (304)
Q Consensus 22 g~~~~~L~n~~~~~~~v~~~Ga~l~s~~~~~g~e~l~~~-~~~~~~~~~~~rgG~p~lfP~~gr~~-----------~~~ 89 (304)
.+..++|+|+++++|+|.++||.|+||+. +|+++||.. +.+.|....+. .| +++|||.||+. +++
T Consensus 11 ~~~~~tL~n~~~~~v~i~~~GA~l~sl~~-~G~~vvlg~~~~~~y~~~~~~-~G-~~lgp~anRI~~g~f~~~G~~y~L~ 87 (347)
T 1nsx_A 11 GSDLISLTNKAGVTISFTNLGARIVDWQK-DGKHLILGFDSAKEYLEKDAY-PG-ATVGPTAGRIKDGLVKISGKDYILN 87 (347)
T ss_dssp TEEEEEEECTTSCEEEEETBTTEEEEEEE-TTEESBCCCSSHHHHHHTCSC-TT-CEECSBCSEEGGGEEEETTEEEECC
T ss_pred eeEEEEEECCCceEEEEEccCcEEEEEEE-CCeEEEEeCCCHHHHhhCCCe-Ee-eEEcccCCcccCCEEEECCEEEEcc
Confidence 67899999986799999999999999994 688888764 43556333333 33 68999999984 344
Q ss_pred -------CceeE---eecceEEeeCCCCCCCCCCCCceEEEEEecCCcchhccCCcceEEEEEEEEccCCcEEEEEEEEe
Q 022000 90 -------QHGFA---RNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLALISRIRN 159 (304)
Q Consensus 90 -------~HG~~---~~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~~~~L~~~~~v~N 159 (304)
+||++ +++.|++++.+ ++...+|+|++.++ ++.++|||+|+++++|+|.++++|+|+|+++
T Consensus 88 ~N~~~n~lHGg~~g~~~~~W~v~~~~-------~~~~~~v~l~l~s~-d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~- 158 (347)
T 1nsx_A 88 QNEGPQTLHGGEESIHTKLWTYEVTD-------LGAEVQVKFSLVSN-DGTNGYPGKIEMSVTHSFDDDNKWKIHYEAI- 158 (347)
T ss_dssp CCBTTBEETTSTTCGGGSBCEEEEEE-------CSSEEEEEEEEEEC-TTGGGCCSCEEEEEEEEEETTSEEEEEEEEE-
T ss_pred CCCCCcccCCCCcccccceEEEEEcc-------CCcceEEEEEEECC-CccCCCCeEEEEEEEEEECCCCeEEEEEEEE-
Confidence 99998 88999998753 11123799999886 4688999999999999998558999999996
Q ss_pred CCCCcEeEeeecccceecCC-----cce--EEEec-----------CCCCcceecccccceeeecCceeee---------
Q 022000 160 INCKPFSFSIAYHTYFAISD-----ISE--VRIEG-----------LETLDYLDNLCQRERFTEQGDALTF--------- 212 (304)
Q Consensus 160 ~~~~~~p~~~g~HpyF~~~~-----~~~--l~~~g-----------l~~~~~ld~~~~~~~~~~~~~~~~~--------- 212 (304)
++++|||++|+||||+++. +.+ |+|.. +|++...+.-.+...+. ....+
T Consensus 159 -~d~~tp~nlg~HpYFnl~g~~~~~i~~~~L~i~a~~~~~~d~~~~iPtG~~~~v~gt~~df~---~~~~l~~~~~~~~~ 234 (347)
T 1nsx_A 159 -SDKDTVFNPTGNVYFNLNGDASESVENHGLRLAASRFVPLKDQTEIVRGDIVDIKNTDLDFR---QEKQLSNAFNSNME 234 (347)
T ss_dssp -ESSCEECBCEECCEECTTSSTTSCGGGSEEEECEEEECCBCSTTCCBCSCCEECTTSTTCCS---SCEEHHHHHHCCCH
T ss_pred -cCCCeEEeeeccceEecCCCCCCceeceEEEEECCeEEEECCCCcCcCCCeEecCCCccccc---CCcccchhhccchh
Confidence 8999999999999999984 233 55531 23222221100000111 01111
Q ss_pred ----cCCcceEEcCCC-----CeEEEEeCCCCcEEEEEecCCCcEEEeCCccccccc-cCCCCCCCcCcEEEeccCcc--
Q 022000 213 ----ESEIDRVYLSSS-----DKIAILDHERKRTFVIHKEGLPDVVVWNPWERKSKS-MADFGDEEYRHMLCVDGAAI-- 280 (304)
Q Consensus 213 ----~~~~D~~y~~~~-----~~~~l~~~~~g~~i~i~~~~~~~~vvwtp~~~~~~~-~~d~~~~~~~~~vCiEp~~~-- 280 (304)
..++|++|+.+. ..++|.+ +++.|+|.++ +|+++|||++...... ..+ .....+.+||||||+.
T Consensus 235 ~~~~~~g~D~~f~l~~~~~~~~~a~l~~--sg~~l~v~t~-~p~lqvyt~~~~~~g~~~~g-~~~~~~~~vclEpq~~pD 310 (347)
T 1nsx_A 235 QVQLVKGIDHPFLLDQLGLDKEQARLTL--DDTSISVFTD-QPSIVIFTANFGDLGTLYHE-KKQVHHGGITFECQVSPG 310 (347)
T ss_dssp HHHHHTSCEEEEEESSCBTTSCCEEEEE--TTEEEEEEES-SSEEEEECCCCTTCCCEETT-EECCTTCCEECEEESCTT
T ss_pred hhcccCCCCEEEEecCCCCceEEEEEEe--CCCEEEEEeC-CCEEEEECCCCCccccccCC-cccCCcCEEEEeccCCCC
Confidence 126899997542 3578877 7899999997 9999999985211000 000 0011245799999973
Q ss_pred --C----CCeEeCCCCEEEEEEEEEEEe
Q 022000 281 --E----KPITLKPGEEWTGRLELSLVH 302 (304)
Q Consensus 281 --~----~~~~L~pGe~~~~~~~i~~~~ 302 (304)
+ ..++|+|||+++.+++|++.-
T Consensus 311 a~n~~~~~~~~L~pGe~~~~~~~~~f~~ 338 (347)
T 1nsx_A 311 SEQIPELGDISLKAGEKYQATTIYSLHT 338 (347)
T ss_dssp TTTCGGGCCCEECTTCEEEEEEEEEEEE
T ss_pred ccCCCCCCCeEECCCCEEEEEEEEEEEe
Confidence 1 358999999999999998854
No 14
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus}
Probab=100.00 E-value=1.6e-35 Score=271.19 Aligned_cols=263 Identities=16% Similarity=0.237 Sum_probs=185.3
Q ss_pred CceEEEEeCCCccEEEEeCCCcEEEEEEeCCCEEEEEcCC-CCcCCCCCcccCcceEEccccCCCC-----------CC-
Q 022000 22 GIEQVVLRNPRGASAKISLHGGQALSWRTERGEELLFTST-KAIFKPPHAVRGGIPICFPQFGNRG-----------SL- 88 (304)
Q Consensus 22 g~~~~~L~n~~~~~~~v~~~Ga~l~s~~~~~g~e~l~~~~-~~~~~~~~~~rgG~p~lfP~~gr~~-----------~~- 88 (304)
.+..++|+|+++++|+|.++||.|+||+.+ +++++|..+ .+.|....+. .| ++++||.||++ ++
T Consensus 17 ~v~~~tL~n~~g~~v~i~~~GA~l~sl~~~-~~dvvlg~~~~~~y~~~~~~-~G-~~lgp~anRI~~g~f~~~G~~y~L~ 93 (338)
T 3imh_A 17 DLCEITLENDAGMAVKVLNYGATLEKVLLD-GENMILSLNSPEDYSKERNF-LG-GTVGRIAGRVRAGQWKHGNEIHQLP 93 (338)
T ss_dssp EEEEEEEECSSSEEEEEETBTTEEEEEEET-TEECBCCCSSGGGGGTSCCC-TT-CEECSBCSEEGGGEEEETTEEEECC
T ss_pred EEEEEEEECCCcEEEEEecCCcEEEEEEEC-CEEEEecCCChHHhccCCCe-Ee-eEEEeeCCEecCCEEEECCEEEECC
Confidence 378899999877999999999999999985 589987643 3444433333 44 48999999984 23
Q ss_pred ------CCceeE--eecceEEeeCCCCCCCCCCCCceEEEEEecCCcchhccCCcceEEEEEEEEccCCcEEEEEEEEeC
Q 022000 89 ------EQHGFA--RNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLALISRIRNI 160 (304)
Q Consensus 89 ------~~HG~~--~~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~~~~L~~~~~v~N~ 160 (304)
.+||++ +.+.|++.... +.+..+|+|++.+. ++..+|||+|+++++|+|.++++|+|+|+++
T Consensus 94 ~N~g~n~LHGg~g~~~~~W~v~~~~-------~~~~~~v~l~l~s~-d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~-- 163 (338)
T 3imh_A 94 LNDGDNHIHGGIGTDMHVWDFRPSC-------DSEHARVDLTLFDP-DGNNDYPGNLKLHARYELDNENNLHYLLEAV-- 163 (338)
T ss_dssp CCBTTBEETTSSCGGGSBCEEEEEE-------CSSEEEEEEEEEEC-TTGGGCCSCEEEEEEEEEETTSEEEEEEEEE--
T ss_pred CCCCCcCCCCCCCcCCceEEEEeee-------ecCCCEEEEEEECC-ccccCCCeEEEEEEEEEEecCCeEEEEEEEe--
Confidence 459998 77899995321 11267899999875 4578999999999999999757899999986
Q ss_pred CCCcEeEeeecccceecCC-cce--EEEe----------cCCCCcceecccccceeee----------cCceeeecCCcc
Q 022000 161 NCKPFSFSIAYHTYFAISD-ISE--VRIE----------GLETLDYLDNLCQRERFTE----------QGDALTFESEID 217 (304)
Q Consensus 161 ~~~~~p~~~g~HpyF~~~~-~~~--l~~~----------gl~~~~~ld~~~~~~~~~~----------~~~~~~~~~~~D 217 (304)
++++|||++|+||||++++ +.+ |+|. .+|++...+.-.+...|.. ...++....++|
T Consensus 164 ~d~~tp~nlg~HpYFnL~g~i~~~~L~i~a~~~~~~d~~~iPTG~~~~v~gt~~DFr~~~~ig~~~~~~~~q~~~~~g~D 243 (338)
T 3imh_A 164 SDKLTIFNPVNHTYFNLGERAEDLNLQMNADYYLPVDEAGLPDRGMAEVAGTAFDFRKTKRIGDALNSDDSQIKLRNGLD 243 (338)
T ss_dssp ESSSEECBCEECCEECTTSCGGGCEEEECEEEECCBCTTSSBSSCCEECTTSTTCCSSCEEHHHHHTSCCHHHHHHTSCE
T ss_pred cCCCeEEEEeeCCEEeCCCCcCCeEEEEEcCcEEEeCCccCCcCceecCCCCcccCCCCeEcchhhhccchhhcccCCCC
Confidence 8999999999999999984 333 5553 2344443321111111110 001111224799
Q ss_pred eEEcCCC--CeEEEEeCCCCcEEEEEecCCCcEEEeCCccccccccCCCCCCCcCcEEEeccCcc--C----CCeEeCCC
Q 022000 218 RVYLSSS--DKIAILDHERKRTFVIHKEGLPDVVVWNPWERKSKSMADFGDEEYRHMLCVDGAAI--E----KPITLKPG 289 (304)
Q Consensus 218 ~~y~~~~--~~~~l~~~~~g~~i~i~~~~~~~~vvwtp~~~~~~~~~d~~~~~~~~~vCiEp~~~--~----~~~~L~pG 289 (304)
++|+... ..++|.+ +|+.|+|.++ .|.+||||+......+ .-.....+.+||||||.. + ..++|+||
T Consensus 244 h~f~l~~~~~~a~l~~--sg~~l~v~t~-~p~~q~YTgn~l~~~g--~g~~~~~~~g~clE~q~~P~n~~~f~~~vL~pG 318 (338)
T 3imh_A 244 HPFILNGNNPAALLSS--NKHRLIVKTN-APALVLYAGNHFNHTG--IVNNIGQYDGITFEAQCPPAEGNDLGQITLLPF 318 (338)
T ss_dssp EEEEECSCSCSEEEEC--SSEEEEEEES-SSEEEEECCTTCCSBT--TBTTCCTTSCEECEEESCCCSSSCCGGGEECTT
T ss_pred CceeecCCceEEEEEC--CCeEEEEEeC-CCEEEEeCCCCcCCCC--CCcccCccCEEEEEccCCCCCCCCCCCeEECCC
Confidence 9998643 2577764 8999999997 8999999986432110 000112346999999974 2 13899999
Q ss_pred CEEEEEEEEEEEe
Q 022000 290 EEWTGRLELSLVH 302 (304)
Q Consensus 290 e~~~~~~~i~~~~ 302 (304)
|+++.++.|+++.
T Consensus 319 e~y~~~t~y~f~~ 331 (338)
T 3imh_A 319 EKFKRTVDWKFEE 331 (338)
T ss_dssp CCEEEEEEEEEEE
T ss_pred CEEEEEEEEEECC
Confidence 9999999999875
No 15
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=100.00 E-value=5.3e-34 Score=285.84 Aligned_cols=262 Identities=12% Similarity=0.164 Sum_probs=186.8
Q ss_pred CCceEEEEeCCCccEEEEeCCCcEEEEEEeCCCEEEEEcCC--CCcCCCCCcccCcceEEccccCCCC-----------C
Q 022000 21 NGIEQVVLRNPRGASAKISLHGGQALSWRTERGEELLFTST--KAIFKPPHAVRGGIPICFPQFGNRG-----------S 87 (304)
Q Consensus 21 ~g~~~~~L~n~~~~~~~v~~~Ga~l~s~~~~~g~e~l~~~~--~~~~~~~~~~rgG~p~lfP~~gr~~-----------~ 87 (304)
.....++|+|+++++++|.++||.|+||+. .|++++|..+ ..+|....+. .| ++++||.||+. +
T Consensus 371 ~~~~~~~l~n~~~~~~~i~~~Ga~l~s~~~-~g~~~v~~~~~~~~y~~~~~~~-~g-~~l~~~~nRi~~g~f~~~G~~y~ 447 (699)
T 1z45_A 371 YDARFVTIGAGTRFQATFANLGASIVDLKV-NGQSVVLGYENEEGYLNPDSAY-IG-ATIGRYANRISKGKFSLCNKDYQ 447 (699)
T ss_dssp TTSEEEEESTTSSEEEEEESBTTCEEEEEE-TTEECBCCCSSHHHHTCTTCCC-TT-CEECSBCSEEGGGEEEETTEEEE
T ss_pred cceEEEEEECCCceEEEEEccCeEEEEEee-cCceEEECCCCHHHHhhcCCCc-cc-cccCcccCeecCcEEEECCEEEE
Confidence 457899999985699999999999999998 5889987643 3445322332 34 57799999984 2
Q ss_pred C-------CCceeEe---ecceEEeeCCCCCCCCCCCCceEEEEEecCCcchhccCCcceEEEEEEEEc-cCCcEEEEEE
Q 022000 88 L-------EQHGFAR---NRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLA-ADGNLALISR 156 (304)
Q Consensus 88 ~-------~~HG~~~---~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~-~~~~L~~~~~ 156 (304)
+ .+||+++ ++.|++..... .+++..+++|++.++++ .++|||+|+++++|+|. ++++|+++|+
T Consensus 448 l~~n~~~~~lHG~~~g~~~~~w~~~~~~~-----~~~~~~~~~~~~~~~~~-~~gyP~~~~~~v~y~L~~~~~~L~i~~~ 521 (699)
T 1z45_A 448 LTVNNGVNANHSSIGSFHRKRFLGPIIQN-----PSKDVFTAEYMLIDNEK-DTEFPGDLLVTIQYTVNVAQKSLEIVYK 521 (699)
T ss_dssp CCCCBTTBEETTGGGCGGGSBCEEEEEEE-----EETTEEEEEEEEEECGG-GSSSSSEEEEEEEEEEETTTTEEEEEEE
T ss_pred ccCCCCCcccCCCccccceeecceeeecc-----CCCCcceEEEEEECCCc-CCCCCceEEEEEEEEEecCCCEEEEEEE
Confidence 3 3699994 78999842110 01112479999988665 88999999999999998 3489999999
Q ss_pred EEeCCCCcEeEeeecccceecCC-----cceEEEecCCCCccee----cccccceeeecCc------eeeec---CCcce
Q 022000 157 IRNINCKPFSFSIAYHTYFAISD-----ISEVRIEGLETLDYLD----NLCQRERFTEQGD------ALTFE---SEIDR 218 (304)
Q Consensus 157 v~N~~~~~~p~~~g~HpyF~~~~-----~~~l~~~gl~~~~~ld----~~~~~~~~~~~~~------~~~~~---~~~D~ 218 (304)
++|+++++|||++|+||||+++. +.+..+. ++...|++ .+++++.....+. ...+. .++|+
T Consensus 522 ~~n~~~~~~p~~~~~H~yFnl~~~~~~~~~~~~l~-~~a~~~~~~d~~~iptg~~~~v~~t~~df~~~~~l~~~~~~~D~ 600 (699)
T 1z45_A 522 GKLTAGEATPINLTNHSYFNLNKPYGDTIEGTEIM-VRSKKSVDVDKNMIPTGNIVDREIATFNSTKPTVLGPKNPQFDC 600 (699)
T ss_dssp EEEEESSEEECBCEECCEECTTTTSCSSSTTEEEE-ESCCEEEEECTTSCEEEEEEECSCCBTTSSSCEEECSSCCCCEE
T ss_pred EEecCCCCceecccccceEeecCCCCCCccccEEE-EecCeEEecCCCCCCCCCcccCcCCCcccCCcccccccCCCCCc
Confidence 99999999999999999999983 3343332 23334442 1233221111111 11122 37999
Q ss_pred EEcCCC---------------CeEEEEeCCCCcEEEEEecCCCcEEEeCCccccccccCCCCCCCcCcEEEeccCcc---
Q 022000 219 VYLSSS---------------DKIAILDHERKRTFVIHKEGLPDVVVWNPWERKSKSMADFGDEEYRHMLCVDGAAI--- 280 (304)
Q Consensus 219 ~y~~~~---------------~~~~l~~~~~g~~i~i~~~~~~~~vvwtp~~~~~~~~~d~~~~~~~~~vCiEp~~~--- 280 (304)
+|+... ..++|.++.+++.|+|.++ +|+++|||++... ++...+.|||||||..
T Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~l~v~~~-~p~~~~yt~~~~~-------~~~~~~~~~clEp~~~pda 672 (699)
T 1z45_A 601 CFVVDENAKPSQINTLNNELTLIVKAFHPDSNITLEVLST-EPTYQFYTGDFLS-------AGYEARQGFAIEPGRYIDA 672 (699)
T ss_dssp EEESCSSCCCCCSBCTTSCCEEEEEEEETTTTEEEEEEES-SSEEEEECCTTCC-------TTCCTTSCEEEEEESCSSG
T ss_pred ceEccCccccccccccccccceeEEEEcCCCCCEEEEEEC-CCEEEEEeCCCCC-------CCCCCCCEEEEecCCCCCc
Confidence 997642 1378999999999999997 9999999975211 0111246999999952
Q ss_pred -C-----CCeEeCCCCEEEEEEEEEE
Q 022000 281 -E-----KPITLKPGEEWTGRLELSL 300 (304)
Q Consensus 281 -~-----~~~~L~pGe~~~~~~~i~~ 300 (304)
+ +.++|+|||+++.+++|++
T Consensus 673 ~n~~~~~~~~~L~pge~~~~~~~~~f 698 (699)
T 1z45_A 673 INQENWKDCVTLKNGETYGSKIVYRF 698 (699)
T ss_dssp GGCTTTGGGGEEETTCEEEEEEEEEE
T ss_pred cCcccCCCCcEECCCCEEEEEEEEEE
Confidence 1 2479999999999999987
No 16
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp}
Probab=99.92 E-value=4.4e-24 Score=198.88 Aligned_cols=267 Identities=15% Similarity=0.174 Sum_probs=172.2
Q ss_pred ccceEEEEecC----CCceEEEEeCCCccEEEE-eCCCcEEEEEEeCCCEEEEEcCCCCcCCCCCcc----cCcceEE--
Q 022000 10 HRAAVEVTKDR----NGIEQVVLRNPRGASAKI-SLHGGQALSWRTERGEELLFTSTKAIFKPPHAV----RGGIPIC-- 78 (304)
Q Consensus 10 ~~~~~~~~~~~----~g~~~~~L~n~~~~~~~v-~~~Ga~l~s~~~~~g~e~l~~~~~~~~~~~~~~----rgG~p~l-- 78 (304)
...+|+...-. .|+..++|+|+.+++++| +..|+.|.+++. +|.++.|.++...+..+..+ ++|...+
T Consensus 31 q~~~v~~~~l~~G~~~G~~~l~i~ng~gl~~~VlP~rG~dI~~~~~-~g~~l~w~s~~~~~~~P~~~~~~~~~g~~~l~~ 109 (384)
T 3ty1_A 31 HAFSIEQKVLHGGKQEGSKILTIHSKDGLTITLSPTRGMNLLRIEG-FGSRMGWDSPVKEVVNPAFINLESRNGLGWLEG 109 (384)
T ss_dssp SCEEEEEEECCSGGGTTCEEEEEEESSSCEEEEEGGGTTEEEEEEE-TTEEECCCCSCCSCCCGGGCCTTHHHHTGGGGT
T ss_pred cceeEEEEEEcCCCccCeEEEEEECCCccEEEEecccCCcceeEEE-CCEEeeecCCcccCcCccccccccCCCCchhhc
Confidence 34556555533 489999999996688876 669999999998 68999998773333221111 2232222
Q ss_pred ----cc-----ccCCCC-----CCCCceeEeecc-----eEEeeCCCCCCCCCCCCceEEEEEecCCcchhccCCcceEE
Q 022000 79 ----FP-----QFGNRG-----SLEQHGFARNRS-----WVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEF 139 (304)
Q Consensus 79 ----fP-----~~gr~~-----~~~~HG~~~~~~-----W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~~~~ 139 (304)
++ ++|.-. ..++||++++.+ |++.+.. ...|+++....+....+|||.++.
T Consensus 110 f~g~~~~cGl~~~G~P~~~~G~~~~LHG~~~~~pa~~~~~~~~~~~----------~~~i~l~g~~~~~~~~G~~~~l~~ 179 (384)
T 3ty1_A 110 FNEMMVRCGYEWTGHPVTADGQIYTLHGKAGNTPASLVEVEVADSA----------PYEIRIRGLVKESTFKKADLQTLT 179 (384)
T ss_dssp CCCSEEEEEESCCSSCEEETTEEECTTCSGGGSCCSEEEEEEESST----------TCCEEEEEEEEEEETTTEEEEEEE
T ss_pred CCeeEeeccCcccCCCCCcCCccccccccccCCCcceeEEEecCCC----------ceEEEEEEEEEEeeeccCCEEEEE
Confidence 22 222111 358999999999 5544321 344666555444456789999999
Q ss_pred EEEEEEccCCcEEEEEEEEeCCCCcEeEeeecccceecCCc-ceEEEecCCCCcceecc---cccc-eeeecCceeeecC
Q 022000 140 RLRVSLAADGNLALISRIRNINCKPFSFSIAYHTYFAISDI-SEVRIEGLETLDYLDNL---CQRE-RFTEQGDALTFES 214 (304)
Q Consensus 140 ~~~y~L~~~~~L~~~~~v~N~~~~~~p~~~g~HpyF~~~~~-~~l~~~gl~~~~~ld~~---~~~~-~~~~~~~~~~~~~ 214 (304)
+++|+|.+ ++|+|+++|+|.++++|||.+++||||..+-. .+.++. ++....++.. ..+. ....... ....
T Consensus 180 ~i~~~l~~-~~l~i~~~VtN~g~~p~P~~~~~H~nfg~Pll~~g~rl~-~p~~~~~p~~~~~~~~l~~~~~~~~--p~~~ 255 (384)
T 3ty1_A 180 ELRYVPGS-NSFSLHDVLTNHADYPHDYQIIYHSNFGTPILEEGARFL-APISSISPFNDYAKSGLKTWQTYQG--PTKD 255 (384)
T ss_dssp EEEECTTC-SEEEEEEEEEECSSSCEEEEEEEEEEECTTTCCTTCEEE-CCEEEEEESSGGGGGGSTTTTBCCC--CCTT
T ss_pred EEEEEeCC-CEEEEEEEEEECCCCCCchheecccccCCCccCCCcEEE-eccceeccccccccccccchhhccC--CCCC
Confidence 99999987 89999999999999999999999999988632 234443 2222222210 0000 0000000 0011
Q ss_pred CcceEEc-C----CCC--eEEEEeCCCCcEEEEEec--CCCcEEEeCCccccccccCCCCCCCcCcEE-EeccCcc----
Q 022000 215 EIDRVYL-S----SSD--KIAILDHERKRTFVIHKE--GLPDVVVWNPWERKSKSMADFGDEEYRHML-CVDGAAI---- 280 (304)
Q Consensus 215 ~~D~~y~-~----~~~--~~~l~~~~~g~~i~i~~~--~~~~~vvwtp~~~~~~~~~d~~~~~~~~~v-CiEp~~~---- 280 (304)
--+.+|. . ..+ .+.|.++..+..+.+..+ .||++++|+.... .+ ..|+ ||||++.
T Consensus 256 ~~E~vf~~d~~~d~~G~~~~~l~n~~~g~~~~l~f~~~~fP~l~~W~~~~~----------~~-~gyvl~LEP~T~~p~~ 324 (384)
T 3ty1_A 256 FDEMVFNIQPLADENHQTLAAVVNKAGDKGASIQFDTRQLPVLTLWKNTDT----------VK-QGYVTGIEPGTSYAYP 324 (384)
T ss_dssp CCCEEEEEEECCCTTSEEEEEEECSSSSCEEEEEEETTTSCEEEEEEEESC----------TT-TCEEEEEEEESSCSSC
T ss_pred CCceEEEEeccccCCCceEEEEEecCCCcEEEEEEchHHCCHhHhhcccCC----------CC-CccEEEEeCccCCCch
Confidence 1135542 1 122 477888888999988774 6899999986211 01 1265 9999983
Q ss_pred -------CCCeEeCCCCEEEEEEEEEEEe
Q 022000 281 -------EKPITLKPGEEWTGRLELSLVH 302 (304)
Q Consensus 281 -------~~~~~L~pGe~~~~~~~i~~~~ 302 (304)
..++.|+|||+++++++|++..
T Consensus 325 ~~~~~~~g~l~~L~PGes~~~~~~i~v~~ 353 (384)
T 3ty1_A 325 VTIERKQKRVKQLQPGASAQFDLTYTLLH 353 (384)
T ss_dssp HHHHHHTTCCEEECTTCEEEEEEEEEEEC
T ss_pred hHHHHhCCCeEEECCCCEEEEEEEEEEec
Confidence 2579999999999999999864
No 17
>3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli}
Probab=94.00 E-value=1.3 Score=38.61 Aligned_cols=123 Identities=15% Similarity=0.176 Sum_probs=68.3
Q ss_pred eEEEEeCCCccEEEEeCCCcEEEEEEeC---C----CEEE-EEcCCCCcCCCCCcccCcceEEccccCCCC-CCCCceeE
Q 022000 24 EQVVLRNPRGASAKISLHGGQALSWRTE---R----GEEL-LFTSTKAIFKPPHAVRGGIPICFPQFGNRG-SLEQHGFA 94 (304)
Q Consensus 24 ~~~~L~n~~~~~~~v~~~Ga~l~s~~~~---~----g~e~-l~~~~~~~~~~~~~~rgG~p~lfP~~gr~~-~~~~HG~~ 94 (304)
+.++|+++. ++++|...||.|.++..+ . +.++ |...... ..-+.-+-|.+.-+ ..+.|.-
T Consensus 4 ~~i~v~td~-l~~~is~~GG~I~~~~Lk~Y~~~~~~~~pv~Ll~~~~~---------~~y~a~~gl~~~~g~~~~~~~~- 72 (280)
T 3bs6_A 4 KLISVKTDV-LDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSPQ---------FIYQAQSGLTGRDGPDNPANGP- 72 (280)
T ss_dssp CEEEEECSS-CEEEEETBTTEEEEEEEEEEESSTTCCSEEEEEEEETT---------EEEEEEEEEESTTCTTSGGGSS-
T ss_pred CEEEEECCc-EEEEEECCCCeEeeeEcCCCcchhcCCCCEEEccCCCC---------CeeEEEEeeeccCCCCCCCCCC-
Confidence 468999995 999999999999999752 1 1222 2211110 00011123333321 1233321
Q ss_pred eecceEEeeCCCCCCCCCCCCceEEEEEecCCcchhccCCcceEEEEEEEEcc-CCcEEEEEEEEeCCCCcEeEe
Q 022000 95 RNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAA-DGNLALISRIRNINCKPFSFS 168 (304)
Q Consensus 95 ~~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~-~~~L~~~~~v~N~~~~~~p~~ 168 (304)
| ..|++....... ...++...|+|++.... ...++.+|+|.. +-.+.++++|+|.+.+++.+.
T Consensus 73 ~-~~f~~~~~~~~l--~~~~~~~~Vtlt~~~~~--------G~~~~ktytf~~~~Y~i~v~~~v~N~s~~~~~~~ 136 (280)
T 3bs6_A 73 R-PLYNVEKDAYVL--AEGQNELQVPMTYTDAA--------GNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEIS 136 (280)
T ss_dssp C-CBCBCSCSEEEC--CTTCSEEEEEEEEECTT--------CCEEEEEEEEETTCCEEEEEEEEECCSSSCEEEE
T ss_pred c-eeEEecCCceec--cCCCceeEEEEEEECCC--------CeEEEEEEEEcCCceEEEEEEEEEcCCCCceeEe
Confidence 2 457654210000 01112466777765421 268999999973 467888899999998866544
No 18
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic inner membrane, transmembrane; 2.50A {Escherichia coli K12}
Probab=92.23 E-value=2.4 Score=37.78 Aligned_cols=123 Identities=14% Similarity=0.158 Sum_probs=66.4
Q ss_pred ceEEEEeCCCccEEEEeCCCcEEEEEEeC---C----CEEE-EEcCCCCcCCCCCcccCcceEEccccCCCC-CCCCcee
Q 022000 23 IEQVVLRNPRGASAKISLHGGQALSWRTE---R----GEEL-LFTSTKAIFKPPHAVRGGIPICFPQFGNRG-SLEQHGF 93 (304)
Q Consensus 23 ~~~~~L~n~~~~~~~v~~~Ga~l~s~~~~---~----g~e~-l~~~~~~~~~~~~~~rgG~p~lfP~~gr~~-~~~~HG~ 93 (304)
-+.++|+|+. ++++|+..||.|.++..+ . +.++ |...... ..-+.-+-|++.-+ ..+.|+-
T Consensus 34 ~~~i~V~td~-l~~~is~~GG~I~~~~Lk~Y~~~~~~~~pv~Ll~~~~~---------~~y~a~~gl~~~~g~~~~~~~~ 103 (330)
T 3blc_A 34 GKLISVKTDV-LDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSPQ---------FIYQAQSGLTGRDGPDNPANGP 103 (330)
T ss_dssp CCEEEEECSS-CEEEEETBTCCEEEEEEEEEESSTTCSSEEEEEEECSS---------CEEEEEEEEESTTCTTSGGGCS
T ss_pred CCEEEEECCc-EEEEEECCCCEEeEEECCCCcccccCCCCeEEecCCCC---------ceeEeeeeeeccCCCCCCCCCC
Confidence 4579999995 999999999999999752 1 1222 2221110 00011111333211 1223321
Q ss_pred EeecceEEeeCCCCCCCCCCCCceEEEEEecCCcchhccCCcceEEEEEEEEcc-CCcEEEEEEEEeCCCCcEeE
Q 022000 94 ARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAA-DGNLALISRIRNINCKPFSF 167 (304)
Q Consensus 94 ~~~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~-~~~L~~~~~v~N~~~~~~p~ 167 (304)
+ ..|++....... ...++...|+|.+.... ...++.+|+|.. +-.+.++++|+|.+++++..
T Consensus 104 -~-~~f~~~~~~~~L--~~~~~~~~v~lt~~~~~--------G~~v~k~ytf~~~~Y~i~v~~~v~N~s~~~~~~ 166 (330)
T 3blc_A 104 -R-PLYNVEKDAYVL--AEGQNELQVPMTYTDAA--------GNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEI 166 (330)
T ss_dssp -C-CBCBCSCSEEEC--CTTCCEEEEEEEEECTT--------SCEEEEEEEEETTCCEEEEEEEEECCSSSCEEE
T ss_pred -c-ceeEecCCceec--cCCCceEEEEEEEECCC--------CeEEEEEEEEcCCceEEEEEEEEEcCCCCccee
Confidence 2 346543210000 01112356777665321 268999999974 34688888999999877644
No 19
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=76.40 E-value=6.4 Score=29.68 Aligned_cols=33 Identities=6% Similarity=0.177 Sum_probs=26.4
Q ss_pred ceEEEEEEEEccCCcEEEEEEEEeCCCCcEeEee
Q 022000 136 SFEFRLRVSLAADGNLALISRIRNINCKPFSFSI 169 (304)
Q Consensus 136 ~~~~~~~y~L~~~~~L~~~~~v~N~~~~~~p~~~ 169 (304)
.+.+++++.-.+ +.+.++++|+|.++++..+.+
T Consensus 6 ~l~~~v~~~~~g-~~v~~~ltv~N~s~~~v~l~f 38 (120)
T 3isy_A 6 EVVLSIDAIQEP-EQIKFNMSLKNQSERAIEFQF 38 (120)
T ss_dssp SEEEEEEEEECS-SCEEEEEEEEECSSSCEEEEE
T ss_pred EEEEEEeeccCC-CeEEEEEEEEcCCCCcEEEEe
Confidence 456677777766 789999999999999887654
No 20
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=68.41 E-value=5.5 Score=28.81 Aligned_cols=31 Identities=23% Similarity=0.374 Sum_probs=22.1
Q ss_pred EEEccCCcEEEEEEEEeCCCCcEeEeeeccccee
Q 022000 143 VSLAADGNLALISRIRNINCKPFSFSIAYHTYFA 176 (304)
Q Consensus 143 y~L~~~~~L~~~~~v~N~~~~~~p~~~g~HpyF~ 176 (304)
++|.. +.=+++++|+|++|.|+- .|-|-.|.
T Consensus 13 I~lN~-gr~~~~l~V~NtGDRPIQ--VGSHyHF~ 43 (101)
T 4ep8_B 13 IALNT-GRATCRVVVENHGDRPIQ--VGSHYHFA 43 (101)
T ss_dssp EECST-TCCEEEEEEEECSSSCEE--EETTSCGG
T ss_pred EEEcC-CCCEEEEEEEeCCCcceE--EccccChh
Confidence 56666 556888999999998765 45555553
No 21
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=59.43 E-value=8.4 Score=29.03 Aligned_cols=30 Identities=23% Similarity=0.408 Sum_probs=21.9
Q ss_pred EEEccCCcEEEEEEEEeCCCCcEeEeeecccce
Q 022000 143 VSLAADGNLALISRIRNINCKPFSFSIAYHTYF 175 (304)
Q Consensus 143 y~L~~~~~L~~~~~v~N~~~~~~p~~~g~HpyF 175 (304)
++|.. ..=+++++|+|++|.|+-+ |-|-.|
T Consensus 19 I~lN~-gr~~~~l~V~NtGDRPIQV--GSHyHF 48 (126)
T 4ac7_B 19 IEINA-GREKTTIRVSNTGDRPIQV--GSHIHF 48 (126)
T ss_dssp EETTT-TSCEEEEEEEECSSSCEEE--ETTSCG
T ss_pred EEeCC-CCcEEEEEEEeCCCCCEEE--ccccch
Confidence 66766 5678899999999987654 555544
No 22
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=59.43 E-value=8.4 Score=29.03 Aligned_cols=30 Identities=23% Similarity=0.408 Sum_probs=21.9
Q ss_pred EEEccCCcEEEEEEEEeCCCCcEeEeeecccce
Q 022000 143 VSLAADGNLALISRIRNINCKPFSFSIAYHTYF 175 (304)
Q Consensus 143 y~L~~~~~L~~~~~v~N~~~~~~p~~~g~HpyF 175 (304)
++|.. ..=+++++|+|++|.|+-+ |-|-.|
T Consensus 19 I~lN~-gr~~~~l~V~NtGDRPIQV--GSHyHF 48 (126)
T 4ubp_B 19 IEINA-GREKTTIRVSNTGDRPIQV--GSHIHF 48 (126)
T ss_dssp EETTT-TSCEEEEEEEECSSSCEEE--ETTSCG
T ss_pred EEeCC-CCcEEEEEEEeCCCCCEEE--ccccch
Confidence 66766 5678899999999987654 555544
No 23
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=53.28 E-value=15 Score=32.94 Aligned_cols=28 Identities=11% Similarity=0.166 Sum_probs=23.8
Q ss_pred EEEEEEccCCcEEEEEEEEeCCCCcEeEe
Q 022000 140 RLRVSLAADGNLALISRIRNINCKPFSFS 168 (304)
Q Consensus 140 ~~~y~L~~~~~L~~~~~v~N~~~~~~p~~ 168 (304)
..+|++-+ ++|+++++|+|.+++|.-++
T Consensus 256 ~A~Y~vpg-R~l~~~~~VtN~g~~pvrlg 283 (382)
T 1yew_A 256 DATYRVPG-RAMRMKLTITNHGNSPIRLG 283 (382)
T ss_dssp EEEEESSC-SEEEEEEEEEECSSSCEEEE
T ss_pred ccEEecCC-cEEEEEEEEEcCCCCceEee
Confidence 46799877 89999999999999988543
No 24
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=50.91 E-value=15 Score=33.34 Aligned_cols=27 Identities=11% Similarity=0.213 Sum_probs=23.3
Q ss_pred EEEEEEccCCcEEEEEEEEeCCCCcEeE
Q 022000 140 RLRVSLAADGNLALISRIRNINCKPFSF 167 (304)
Q Consensus 140 ~~~y~L~~~~~L~~~~~v~N~~~~~~p~ 167 (304)
..+|++-+ ++|+++++|+|.+++|.-+
T Consensus 290 ~A~Y~vpg-R~l~~~~~VtN~g~~pvrl 316 (419)
T 3rfr_A 290 GGVYKVPG-RELTINVKVKNGTSQPVRL 316 (419)
T ss_dssp EEEEESSS-SEEEEEEEEECCSSSCBEE
T ss_pred ceEEecCC-cEEEEEEEEecCCCCceEE
Confidence 46799987 8999999999999998843
No 25
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=34.91 E-value=23 Score=29.39 Aligned_cols=41 Identities=20% Similarity=0.225 Sum_probs=25.8
Q ss_pred cCCcceEE--EEEEEEccCCcEEEEEEEEeCCCCcEeEeeecccce
Q 022000 132 IWPHSFEF--RLRVSLAADGNLALISRIRNINCKPFSFSIAYHTYF 175 (304)
Q Consensus 132 ~~P~~~~~--~~~y~L~~~~~L~~~~~v~N~~~~~~p~~~g~HpyF 175 (304)
.-|+.+.+ .=.++|.. +.=+++++|+|+||.|+-+ |-|-.|
T Consensus 105 ~~PGei~~~~~g~I~lN~-gr~~~~l~V~NtGDRPIQV--GSHyHF 147 (225)
T 3qga_A 105 FKAGEIKFASDKDIELNA-GKEITELKVTNKGPKSLHV--GSHFHF 147 (225)
T ss_dssp CCTTCEECSCSCCEETTT-TCCCEEEEEEECSSSCEEE--ETTSCG
T ss_pred CCCCeEeccCCCceecCC-CCceEEEEEEECCCCceee--ccccch
Confidence 45665511 12356665 5567888999999987755 555444
No 26
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=34.48 E-value=1.5e+02 Score=29.25 Aligned_cols=57 Identities=11% Similarity=0.112 Sum_probs=38.6
Q ss_pred ceEEEEEecCCcchhccCCcceEEEEEEEEccC-CcEEEEEEEEeCCCCcEeEeeecccceecCC
Q 022000 116 KVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAAD-GNLALISRIRNINCKPFSFSIAYHTYFAISD 179 (304)
Q Consensus 116 ~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~~-~~L~~~~~v~N~~~~~~p~~~g~HpyF~~~~ 179 (304)
...+++.|.+.. ..+++++.|++-++ .-++...+|+|++++++.+.-..-.-+.++.
T Consensus 130 ~~~l~i~l~D~~-------~~l~v~l~y~~~~~~~vi~~~~~i~N~g~~~v~l~~~~s~~l~~~~ 187 (729)
T 4fnq_A 130 AETLEIVLGDAL-------IGLEVTLQYTAYEKWNVITRAARFENKGGERLKLLRALSMSVDFPT 187 (729)
T ss_dssp EEEEEEEEEETT-------TTEEEEEEEEEESSSSEEEEEEEEEECSSSCEEEEEEEEEEEEESC
T ss_pred ceEEEEEEEeCC-------CCeEEEEEEEEECCCCEEEEEEEEEECCCCCEEEeEeeeecCcCCC
Confidence 456666665421 25788999999542 5677789999999998876554444445553
No 27
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=31.47 E-value=24 Score=29.46 Aligned_cols=41 Identities=17% Similarity=0.420 Sum_probs=26.2
Q ss_pred cCCcceEEE-EEEEEccCCcEEEEEEEEeCCCCcEeEeeecccce
Q 022000 132 IWPHSFEFR-LRVSLAADGNLALISRIRNINCKPFSFSIAYHTYF 175 (304)
Q Consensus 132 ~~P~~~~~~-~~y~L~~~~~L~~~~~v~N~~~~~~p~~~g~HpyF 175 (304)
.-|+.+... =.++|.. +.=+++++|+|+||.|+-+ |-|-.|
T Consensus 106 miPGei~~~~g~I~lN~-gr~~~~l~V~NtGDRPIQV--GSHyHF 147 (238)
T 1e9y_A 106 LVPGELFLKNEDITINE-GKKAVSVKVKNVGDRPVQI--GSHFHF 147 (238)
T ss_dssp CCTTCEECCSCEEETTT-TCCCCEEEEEECSSSCEEE--ETTSCG
T ss_pred CCCCeEEcCCCCeeeCC-CCCeEEEEEEeCCCCceEe--ccccch
Confidence 456654331 1366765 4557888999999987755 555444
No 28
>2wnx_A Glycoside hydrolase, family 9; cellulose degradation; 1.31A {Clostridium thermocellum} PDB: 2wo4_A 2wob_A
Probab=31.25 E-value=98 Score=24.50 Aligned_cols=42 Identities=14% Similarity=0.259 Sum_probs=31.4
Q ss_pred EEEEEEEcc----CCcEEEEEEEEeCCCCcEeEe-eecccceecCCc
Q 022000 139 FRLRVSLAA----DGNLALISRIRNINCKPFSFS-IAYHTYFAISDI 180 (304)
Q Consensus 139 ~~~~y~L~~----~~~L~~~~~v~N~~~~~~p~~-~g~HpyF~~~~~ 180 (304)
+.+.|.... .+.+++.++|+|++..++.+. +.+.=||.++..
T Consensus 13 l~Vqy~~~~~~~~~n~i~~~~~I~N~g~~~i~Ls~lkiRYyft~d~~ 59 (170)
T 2wnx_A 13 ISVSYKCGVKDGTKNTIRATINIKNTGTTPVNLSDIKVRYWFTSDGN 59 (170)
T ss_dssp EEEEEEECCCCSSCCEEEEEEEEEECSSSCEEGGGEEEEEEECCTTC
T ss_pred EEEEEEeCCCCCCCCEEEEEEEEEECCCCceecCcEEEEEEEcCCCC
Confidence 445555532 467999999999999877654 888888988754
No 29
>2xbt_A Cellulosomal scaffoldin; sugar binding protein; 1.83A {Bacteroides cellulosolvens}
Probab=29.85 E-value=87 Score=24.53 Aligned_cols=33 Identities=12% Similarity=0.346 Sum_probs=26.8
Q ss_pred CcEEEEEEEEeCCCCcEeEe-eecccceecCCcc
Q 022000 149 GNLALISRIRNINCKPFSFS-IAYHTYFAISDIS 181 (304)
Q Consensus 149 ~~L~~~~~v~N~~~~~~p~~-~g~HpyF~~~~~~ 181 (304)
+.+.+.++|+|++..+..+. +..+=||.++...
T Consensus 24 n~i~~~~~I~N~g~~~i~Ls~lkiRYyft~d~~~ 57 (160)
T 2xbt_A 24 NQIYMNMKLQNTGSSTYDLSKITIRYFYTSDDDK 57 (160)
T ss_dssp SSEEEEEEEEECSSCCEEGGGEEEEEEECCSSCC
T ss_pred CEEEEEEEEEECCCCceecCcEEEEEEEeCCCCc
Confidence 67999999999998877654 8888899887643
No 30
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=28.85 E-value=1.5e+02 Score=29.21 Aligned_cols=49 Identities=14% Similarity=0.198 Sum_probs=34.1
Q ss_pred ceEEEEEecCCcchhccCCcceEEEEEEEEccC-CcEEEEEEEEeCCCCcEeEeeec
Q 022000 116 KVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAAD-GNLALISRIRNINCKPFSFSIAY 171 (304)
Q Consensus 116 ~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~~-~~L~~~~~v~N~~~~~~p~~~g~ 171 (304)
...+++.+.+.. ..++++++|++.++ .-++...+++|++++++.+.-..
T Consensus 130 ~~~l~i~l~D~~-------~~l~v~l~y~~~~~~~vi~~~~~i~N~g~~~~~l~~~~ 179 (720)
T 2yfo_A 130 AQTLEIVLADEN-------AQVEVHLLYGVLEENDVITRSVRIKNTGTGQITIEKAA 179 (720)
T ss_dssp EEEEEEEEEETT-------TTEEEEEEEEEETTTTEEEEEEEEEECSSSCEEEEEEE
T ss_pred CcEEEEEEEECC-------CCEEEEEEEEEECCCCEEEEEEEEEECCCCCEEEeeee
Confidence 445666665421 25688999999862 46888899999999876554433
No 31
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=28.40 E-value=82 Score=30.73 Aligned_cols=38 Identities=18% Similarity=0.286 Sum_probs=28.7
Q ss_pred cCCCceEEEEeCCCccEEEEeC-CCcEEEEEEeC-CCEEEE
Q 022000 19 DRNGIEQVVLRNPRGASAKISL-HGGQALSWRTE-RGEELL 57 (304)
Q Consensus 19 ~~~g~~~~~L~n~~~~~~~v~~-~Ga~l~s~~~~-~g~e~l 57 (304)
+..|...+.++++. +.+.+.. .||.|..+... ...+++
T Consensus 394 d~dg~~e~l~~~~~-~n~~~~~~~Gg~i~e~~~~~~~~n~~ 433 (659)
T 1k1x_A 394 DFDGRAEIMVENDG-FIATIKPHYGGSIFELSSKRKAVNYN 433 (659)
T ss_dssp SSSSSCEEEEECSS-EEEEEETTTTTEEEEEEETTTTEETT
T ss_pred CCCCceeeeeeCCc-eEEEEccCCCCEEEEEeccchhccHh
Confidence 45788899999985 7888866 59999999873 344543
No 32
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=28.21 E-value=57 Score=21.39 Aligned_cols=17 Identities=12% Similarity=0.116 Sum_probs=12.9
Q ss_pred EEEEEEEccCCcEEEEEE
Q 022000 139 FRLRVSLAADGNLALISR 156 (304)
Q Consensus 139 ~~~~y~L~~~~~L~~~~~ 156 (304)
-+++|+|++ +.|.+.++
T Consensus 31 gtvtytldg-ndleirit 47 (85)
T 2kl8_A 31 GTVTYTLDG-NDLEIRIT 47 (85)
T ss_dssp CEEEEEECS-SCEEEEEE
T ss_pred ceEEEEecC-CeeEEEEe
Confidence 468999987 77887653
No 33
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.53 E-value=90 Score=22.76 Aligned_cols=37 Identities=24% Similarity=0.173 Sum_probs=29.5
Q ss_pred EEEEccCCcEEEEEEEEeCCCCcEeEeeecccceecCC
Q 022000 142 RVSLAADGNLALISRIRNINCKPFSFSIAYHTYFAISD 179 (304)
Q Consensus 142 ~y~L~~~~~L~~~~~v~N~~~~~~p~~~g~HpyF~~~~ 179 (304)
-+..-+ ..-+.++.++|.|+.+..|.+-..+.|.+..
T Consensus 35 g~~~v~-~~~~~~~~l~N~g~~~~~f~~~~~~~F~i~P 71 (122)
T 2ys4_A 35 STCPVK-YSTQKILLVRNIGNKNAVFHIKTCRPFSIEP 71 (122)
T ss_dssp CSEESS-SCEEEEEEEECCSSSCEEEEEECCTTEEEES
T ss_pred CCeecC-CeEEEEEEEEECCCCCEEEEEecCCCeEEEC
Confidence 344445 5678889999999999999998888888753
No 34
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=22.15 E-value=2e+02 Score=28.55 Aligned_cols=47 Identities=9% Similarity=0.099 Sum_probs=32.7
Q ss_pred ceEEEEEecCCcchhccCCcceEEEEEEEEccC-CcEEEEEEEEeCCCCcEeEee
Q 022000 116 KVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAAD-GNLALISRIRNINCKPFSFSI 169 (304)
Q Consensus 116 ~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~~-~~L~~~~~v~N~~~~~~p~~~ 169 (304)
...+++.+.+. .+ .+++++.|++.++ +-++...+++|.+++++-+.-
T Consensus 131 ~~~l~i~l~D~-----~~--~l~v~l~y~~~~~~~vi~~~~~i~N~g~~~v~l~~ 178 (745)
T 3mi6_A 131 AQTLVVSFNDR-----IT--GLALDLNYSIFPHQDVIVKSAKFTNPSSEKLVLNR 178 (745)
T ss_dssp CEEEEEEEEET-----TT--CCEEEEEEEEEGGGTEEEEEEEEECCSSSCEEEEE
T ss_pred CCEEEEEEEeC-----CC--CeEEEEEEEEECCCCEEEEEEEEEECCCCCEEeee
Confidence 45677777642 12 5678888888653 567777899999998876543
No 35
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=21.97 E-value=1.7e+02 Score=28.89 Aligned_cols=56 Identities=9% Similarity=0.048 Sum_probs=36.0
Q ss_pred ceEEEEEecCCcchhccCCcceEEEEEEEEccC-CcEEEEEEEEeCCCCcEeEeeecccceecC
Q 022000 116 KVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAAD-GNLALISRIRNINCKPFSFSIAYHTYFAIS 178 (304)
Q Consensus 116 ~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~~-~~L~~~~~v~N~~~~~~p~~~g~HpyF~~~ 178 (304)
...+++.+.+.. ..++++++|++.++ .-++...+++|++++++.+.--.=.-+.++
T Consensus 134 ~~~l~i~l~D~~-------~~l~v~l~y~~~~~~~~i~~~~~i~N~g~~~~~l~~~~s~~l~~p 190 (732)
T 2xn2_A 134 AQTLIVTLEDKV-------SKLEYDLLYTIYRDRPVIVRSVQVHNHGEEAVYLEKVASMQMDYV 190 (732)
T ss_dssp EEEEEEEEEETT-------TTEEEEEEEEEETTSSEEEEEEEEEECSSSCEEEEEEEEEEEEES
T ss_pred CcEEEEEEEeCC-------CCEEEEEEEEEECCCCEEEEEEEEEECcCCcEEEeEEeeccccCC
Confidence 345666665421 25688999999863 467888999999998765544333333343
No 36
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=21.60 E-value=2.8e+02 Score=27.72 Aligned_cols=20 Identities=30% Similarity=0.413 Sum_probs=15.8
Q ss_pred CeEeCCCCEEEEEEEEEEEe
Q 022000 283 PITLKPGEEWTGRLELSLVH 302 (304)
Q Consensus 283 ~~~L~pGe~~~~~~~i~~~~ 302 (304)
.+.|+|||+.+..+.+-+..
T Consensus 252 ~i~L~PGe~~~i~f~lG~~~ 271 (822)
T 3rrs_A 252 AVSLAPGESRELVYVLGYVE 271 (822)
T ss_dssp EEEECTTCEEEEEEEEEEEE
T ss_pred EEEECCCCEEEEEEEEEEEC
Confidence 47999999999887766543
No 37
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=21.47 E-value=3.5e+02 Score=27.77 Aligned_cols=118 Identities=10% Similarity=0.044 Sum_probs=62.1
Q ss_pred EEEEeCCCccEEEEeCCCcEEEEEEeCCCEEEEEcC-CCCcCCCCCcccCcceEEc---c------ccCCCCCCCCceeE
Q 022000 25 QVVLRNPRGASAKISLHGGQALSWRTERGEELLFTS-TKAIFKPPHAVRGGIPICF---P------QFGNRGSLEQHGFA 94 (304)
Q Consensus 25 ~~~L~n~~~~~~~v~~~Ga~l~s~~~~~g~e~l~~~-~~~~~~~~~~~rgG~p~lf---P------~~gr~~~~~~HG~~ 94 (304)
.++++.+ +.++.+...-|.|.||.. +|+++|-.. ....|.....--.|+..-+ | |-..-...-.|
T Consensus 746 ~~~v~~~-~~~~~f~~~~G~l~s~~~-~g~~~l~~~~~~~~wRaptdND~G~~~~~~~~~~~~~~~W~~a~~~~~~~--- 820 (1023)
T 1jz7_A 746 DFCIELG-NKRWQFNRQSGFLSQMWI-GDKKQLLTPLRDQFTRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEA--- 820 (1023)
T ss_dssp EEEEEET-TEEEEEETTTCSEEEEEE-TTEECEEEEEEEECCCCCCHHHHTTCBTTBCCTTSHHHHHHHHTTTTCEE---
T ss_pred eEEEEEC-CEEEEEECCcceEEEEEE-CCEEeecCCCcCceEeCCcccccccccccccccccchHHHhhcCcccccc---
Confidence 5567766 488888888789999998 688887532 3445553211111111100 0 21100000112
Q ss_pred eecceEEeeCCCCCCCCCCCCceEEEEEecCCcchhccCCc-ceEEEEEEEEccCCcEEEEEEEEeCC
Q 022000 95 RNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPH-SFEFRLRVSLAADGNLALISRIRNIN 161 (304)
Q Consensus 95 ~~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~-~~~~~~~y~L~~~~~L~~~~~v~N~~ 161 (304)
+...+++.+.+ +...|+..+.... -+- .+.++++|++..+..|.++++++-.+
T Consensus 821 ~~~~~~~~~~~---------~~v~v~~~~~~~~-----~~~~~~~~~~~y~i~~~G~i~v~~~~~~~~ 874 (1023)
T 1jz7_A 821 ALLQCTADTLA---------DAVLITTAHAWQH-----QGKTLFISRKTYRIDGSGQMAITVDVEVAS 874 (1023)
T ss_dssp EEEEEEEEECS---------SEEEEEEEEEEEE-----TTEEEEEEEEEEEEETTSCEEEEEEEEECT
T ss_pred EEEEEEEEecC---------CeEEEEEEEEecC-----CCcceEEEEEEEEEeCCCEEEEEEEEEeCC
Confidence 22234443221 1344555443211 011 57888889998777899988876544
No 38
>3zqx_A Cellulose 1,4-beta-cellobiosidase; hydrolase, cellulose binding protein; 1.04A {Clostridium thermocellum} PDB: 2ylk_A
Probab=20.83 E-value=2e+02 Score=22.12 Aligned_cols=48 Identities=15% Similarity=0.203 Sum_probs=33.6
Q ss_pred EEEEEEEcc----CCcEEEEEEEEeCCCCcEeEe-eecccceecCCcceEEEe
Q 022000 139 FRLRVSLAA----DGNLALISRIRNINCKPFSFS-IAYHTYFAISDISEVRIE 186 (304)
Q Consensus 139 ~~~~y~L~~----~~~L~~~~~v~N~~~~~~p~~-~g~HpyF~~~~~~~l~~~ 186 (304)
|.+.|+=.+ .+.++..+.|+|++..+..+. +.+.=||.+++..++.+.
T Consensus 3 l~vqy~~~~~~~~~n~i~~~~~I~N~g~~~i~Ls~lkiRYyft~d~~~~~~~~ 55 (146)
T 3zqx_A 3 VKVQYLCENTQTSTQEIKGKFNIVNTGNRDYSLKDIVLRYYFTKEHNSQLQFI 55 (146)
T ss_dssp EEEEEEESCCCSEESCEEEEEEEEECSSCCEEGGGEEEEEECCCCCCSCEEEE
T ss_pred EEEEEEcCCCCCCCCEEeEEEEEEECCCceEEcCcEEEEEEEecCCCccEEEE
Confidence 455555432 256999999999998877665 778888888765455543
Done!