Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>022002
MASLAQAPSAMSTVGVLWTLPRSMRLVNFKSVIPVVTSPCTHVKHSPLCCTKLTPWEPSP
ASHAPTDDADYKILNKNSNIFETLSSDNTAEAPATKTEEVTDANNQPLVQLQFLKWPMWL
LGPCILLGTDCIFNIGATLFLLMADSCARSKNTTRACNSKPPFSYKFWNMVANTTGFIIP
LLMLFGSQKGFLQPQLPFIPFAVLLGPYLLLLSIQILTEMLTWHWQSPVWLVTPVVYESY
RVLQLMRGLKLGAELSAPAWIVHTVRGLVCWWILILGVQLMRVAWFAGFTSQARRQQSPA
SADG

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022002
        (304 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2103326 - symbol:AT3G60590 species:3702 "Arabi...   695  8.2e-85   2


>TAIR|locus:2103326 [details] [associations]
            symbol:AT3G60590 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0009706 "chloroplast
            inner membrane" evidence=IDA] [GO:0009941 "chloroplast envelope"
            evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009536
            "plastid" evidence=IDA] EMBL:CP002686 GO:GO:0009706 IPI:IPI00528384
            RefSeq:NP_974468.1 UniGene:At.19770 PRIDE:F4JBW0
            EnsemblPlants:AT3G60590.3 GeneID:825230 KEGG:ath:AT3G60590
            OMA:WFAGFTA PhylomeDB:F4JBW0 ArrayExpress:F4JBW0 Uniprot:F4JBW0
        Length = 404

 Score = 695 (249.7 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
 Identities = 123/179 (68%), Positives = 150/179 (83%)

Query:   126 LLGTDCIFNIGATLFLLMADSCARSKNTTRACNSKPPFSYKFWNMVANTTGFIIPLLMLF 185
             L+G DCIFN+GATLFLLMADSCAR K+ +++CNSKPPFSYKFWNM +   GF++P+L+LF
Sbjct:   222 LIGLDCIFNLGATLFLLMADSCARPKDPSQSCNSKPPFSYKFWNMFSLIIGFLVPMLLLF 281

Query:   186 GSQKGFL---QPQLPFIPFAVLLGPYLLLLSIQILTEMLTWHWQSPVWLVTPVVYESYRV 242
             GSQ G L   QPQ+PF+  AV+L PY +LL++Q LTE+LTWHWQSPVWLVTPVVYE+YR+
Sbjct:   282 GSQSGLLASLQPQIPFLSSAVILFPYFILLAVQTLTEILTWHWQSPVWLVTPVVYEAYRI 341

Query:   243 LQLMRGLKLGAELSAPAWIVHTVRGLVCWWILILGVQLMRVAWFAGFTSQARRQQSPAS 301
             LQLMRGL L AE++AP W+VH +RGLV WW+LILG+QLMRVAWFAGF S+    Q P S
Sbjct:   342 LQLMRGLTLSAEVNAPVWVVHMLRGLVSWWVLILGMQLMRVAWFAGFASRTTTGQQPQS 400

 Score = 173 (66.0 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
 Identities = 41/113 (36%), Positives = 64/113 (56%)

Query:    17 LWTLPRSMRLVNFKSVIPVVTSPCT-HVKHSPLCCT-KLTPWEPSPASHAPTDDADYKIL 74
             L T+   +RL N   +  + T  C    ++  + CT KL+ WEPSP  HA  ++A   +L
Sbjct:    88 LCTMTPRVRLKNPNMLQKLKTGSCNFRFRNLRVLCTPKLSQWEPSPFIHASAEEAADIVL 147

Query:    75 NKNSNIFETLSSDNTAEAPATKTEEVTDANNQPLVQLQFLKWPMWLLGPCILL 127
             +K +N+FE++ S++  E    K +    A  +   Q+Q LKWP+WLLGP +LL
Sbjct:   148 DKTANVFESIVSESAEEE---KVD--MSAQQRTNSQVQVLKWPIWLLGPSVLL 195


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.135   0.441    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      304       304   0.00098  115 3  11 22  0.48    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  620 (66 KB)
  Total size of DFA:  235 KB (2125 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.95u 0.09s 26.04t   Elapsed:  00:00:01
  Total cpu time:  25.95u 0.09s 26.04t   Elapsed:  00:00:01
  Start:  Sat May 11 00:51:45 2013   End:  Sat May 11 00:51:46 2013

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