Query 022005
Match_columns 304
No_of_seqs 246 out of 1783
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 12:34:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022005.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022005hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oi8_A Uncharacterized protein 99.9 1.3E-21 4.4E-26 161.4 10.3 129 164-303 2-131 (156)
2 3lhh_A CBS domain protein; str 99.8 4.5E-21 1.6E-25 160.8 6.3 130 163-303 5-135 (172)
3 3lv9_A Putative transporter; C 99.8 4.6E-19 1.6E-23 144.3 6.3 114 183-303 2-116 (148)
4 3ocm_A Putative membrane prote 99.7 2.2E-18 7.4E-23 144.9 7.1 115 181-303 13-128 (173)
5 3oco_A Hemolysin-like protein 99.6 1.9E-17 6.5E-22 135.7 1.8 110 187-303 3-114 (153)
6 3jtf_A Magnesium and cobalt ef 99.6 2.1E-15 7.1E-20 119.9 8.2 95 202-303 3-97 (129)
7 3k6e_A CBS domain protein; str 99.6 1.1E-15 3.7E-20 126.2 5.1 103 194-303 4-115 (156)
8 3hf7_A Uncharacterized CBS-dom 99.6 1.7E-15 5.7E-20 120.8 4.3 94 203-303 1-98 (130)
9 3lfr_A Putative metal ION tran 99.5 9.4E-15 3.2E-19 117.2 7.9 94 203-303 2-98 (136)
10 3i8n_A Uncharacterized protein 99.5 2.6E-15 8.8E-20 119.4 3.4 97 200-303 2-100 (130)
11 3kxr_A Magnesium transporter, 99.5 9.1E-14 3.1E-18 119.8 12.2 106 187-303 37-145 (205)
12 3nqr_A Magnesium and cobalt ef 99.5 1.8E-14 6.2E-19 114.0 7.0 95 202-303 1-97 (127)
13 4esy_A CBS domain containing m 99.5 1.3E-13 4.4E-18 114.7 8.5 102 191-303 7-134 (170)
14 2qrd_G Protein C1556.08C; AMPK 99.5 4.8E-14 1.6E-18 129.3 6.3 113 185-303 2-138 (334)
15 2zy9_A Mg2+ transporter MGTE; 99.4 2.6E-13 9E-18 131.1 10.1 125 164-303 110-248 (473)
16 2yvy_A MGTE, Mg2+ transporter 99.4 2.8E-13 9.5E-18 121.9 8.5 108 185-303 116-228 (278)
17 2emq_A Hypothetical conserved 99.4 2.9E-13 9.8E-18 110.5 6.8 102 195-303 2-112 (157)
18 3ctu_A CBS domain protein; str 99.4 1.5E-13 5.2E-18 112.3 4.9 102 195-303 6-115 (156)
19 3lqn_A CBS domain protein; csg 99.4 2E-13 6.8E-18 110.7 5.1 99 198-303 9-116 (150)
20 3k2v_A Putative D-arabinose 5- 99.4 2.3E-13 7.8E-18 110.6 5.0 93 204-303 28-124 (149)
21 2v8q_E 5'-AMP-activated protei 99.4 1.9E-13 6.5E-18 125.2 3.8 114 182-303 15-147 (330)
22 3t4n_C Nuclear protein SNF4; C 99.3 1.5E-13 5E-18 125.5 1.9 115 183-303 8-143 (323)
23 4gqw_A CBS domain-containing p 99.3 1.5E-12 5.2E-17 105.2 6.1 95 202-303 3-114 (152)
24 2yzi_A Hypothetical protein PH 99.3 5.3E-12 1.8E-16 100.7 8.4 96 199-303 2-101 (138)
25 3kpb_A Uncharacterized protein 99.3 1.6E-12 5.5E-17 101.4 4.8 91 204-303 1-91 (122)
26 1yav_A Hypothetical protein BS 99.3 1.6E-12 5.4E-17 106.6 4.9 97 200-303 10-115 (159)
27 2oux_A Magnesium transporter; 99.3 9.9E-12 3.4E-16 112.4 9.8 108 185-303 118-230 (286)
28 3fhm_A Uncharacterized protein 99.3 2.1E-12 7.3E-17 106.7 4.7 101 196-303 16-122 (165)
29 2rc3_A CBS domain; in SITU pro 99.3 4.4E-12 1.5E-16 100.9 5.9 91 205-303 7-103 (135)
30 3sl7_A CBS domain-containing p 99.3 3.8E-12 1.3E-16 105.9 5.3 94 203-303 3-127 (180)
31 2ef7_A Hypothetical protein ST 99.3 7.8E-12 2.7E-16 99.0 6.8 93 201-303 1-96 (133)
32 3gby_A Uncharacterized protein 99.2 6.8E-12 2.3E-16 99.0 6.3 92 202-303 3-97 (128)
33 2rih_A Conserved protein with 99.2 1.5E-11 5.3E-16 98.5 7.1 90 204-303 5-99 (141)
34 3org_A CMCLC; transporter, tra 99.2 4.8E-12 1.6E-16 126.4 4.4 95 202-303 451-597 (632)
35 2p9m_A Hypothetical protein MJ 99.2 1.4E-11 4.9E-16 98.0 6.4 94 201-303 5-102 (138)
36 3fv6_A YQZB protein; CBS domai 99.2 2.1E-11 7.1E-16 100.0 7.1 93 201-303 14-112 (159)
37 1pvm_A Conserved hypothetical 99.2 3.3E-11 1.1E-15 101.3 7.8 91 204-303 9-104 (184)
38 3kh5_A Protein MJ1225; AMPK, A 99.2 1.2E-11 4.1E-16 109.9 4.8 124 164-303 51-177 (280)
39 2o16_A Acetoin utilization pro 99.2 2.3E-11 7.8E-16 100.0 5.5 93 202-303 3-107 (160)
40 1pbj_A Hypothetical protein; s 99.2 2E-11 6.8E-16 95.4 4.9 90 204-303 1-94 (125)
41 4fry_A Putative signal-transdu 99.2 2.6E-11 8.8E-16 99.0 5.6 92 204-303 7-107 (157)
42 2j9l_A Chloride channel protei 99.2 2.2E-11 7.5E-16 101.8 5.2 96 202-303 9-137 (185)
43 1y5h_A Hypothetical protein RV 99.1 1.9E-11 6.6E-16 96.7 4.2 93 202-303 6-103 (133)
44 2pfi_A Chloride channel protei 99.1 2.8E-11 9.6E-16 99.1 4.3 100 196-303 5-119 (164)
45 3ddj_A CBS domain-containing p 99.1 3.7E-11 1.3E-15 108.1 5.2 120 164-303 64-185 (296)
46 1zfj_A Inosine monophosphate d 99.1 8.6E-11 2.9E-15 113.9 7.7 122 164-303 54-182 (491)
47 4fxs_A Inosine-5'-monophosphat 99.1 2.2E-11 7.4E-16 118.2 2.8 121 164-303 53-180 (496)
48 1o50_A CBS domain-containing p 99.1 1E-10 3.4E-15 95.6 6.2 93 200-303 12-124 (157)
49 3pc3_A CG1753, isoform A; CBS, 99.1 1.2E-10 4.3E-15 113.8 6.7 95 201-303 381-480 (527)
50 3usb_A Inosine-5'-monophosphat 99.0 1.7E-10 5.9E-15 112.3 6.9 122 164-303 77-205 (511)
51 2nyc_A Nuclear protein SNF4; b 99.0 1.1E-10 3.8E-15 93.3 4.3 94 201-303 5-112 (144)
52 1vr9_A CBS domain protein/ACT 99.0 8.2E-10 2.8E-14 95.3 9.2 89 204-303 13-101 (213)
53 3kh5_A Protein MJ1225; AMPK, A 99.0 4.4E-10 1.5E-14 99.7 7.1 92 205-303 4-113 (280)
54 2uv4_A 5'-AMP-activated protei 99.0 2.8E-10 9.7E-15 92.4 5.3 92 201-303 20-122 (152)
55 2yzq_A Putative uncharacterize 99.0 4.3E-10 1.5E-14 100.1 5.7 89 204-303 1-89 (282)
56 2cu0_A Inosine-5'-monophosphat 99.0 1.2E-10 4.1E-15 112.8 1.4 118 164-303 57-179 (486)
57 1me8_A Inosine-5'-monophosphat 98.9 1.2E-10 4.2E-15 113.2 1.4 122 164-303 61-192 (503)
58 3ghd_A A cystathionine beta-sy 98.9 1.6E-09 5.4E-14 77.0 5.8 65 215-282 1-70 (70)
59 3l2b_A Probable manganase-depe 98.9 9.8E-10 3.3E-14 96.4 5.0 57 203-263 6-62 (245)
60 4avf_A Inosine-5'-monophosphat 98.9 2.4E-10 8.2E-15 110.7 0.8 120 164-303 52-178 (490)
61 2yzq_A Putative uncharacterize 98.8 5.6E-09 1.9E-13 92.8 7.8 93 202-303 58-155 (282)
62 3fio_A A cystathionine beta-sy 98.8 7E-09 2.4E-13 72.7 5.8 63 216-281 2-69 (70)
63 3ddj_A CBS domain-containing p 98.8 5.7E-09 1.9E-13 93.7 6.5 93 200-303 16-122 (296)
64 3t4n_C Nuclear protein SNF4; C 98.8 4.4E-09 1.5E-13 95.6 5.4 94 201-303 184-291 (323)
65 2d4z_A Chloride channel protei 98.8 6.2E-09 2.1E-13 92.2 5.4 60 200-262 9-69 (250)
66 3l2b_A Probable manganase-depe 98.6 1.6E-08 5.3E-13 88.7 4.2 60 202-264 183-242 (245)
67 2qrd_G Protein C1556.08C; AMPK 98.6 3.9E-08 1.3E-12 89.7 5.5 93 202-303 180-286 (334)
68 1vrd_A Inosine-5'-monophosphat 98.6 9.5E-09 3.2E-13 99.6 1.3 98 191-303 87-186 (494)
69 2v8q_E 5'-AMP-activated protei 98.6 9.1E-08 3.1E-12 87.2 7.1 93 203-303 189-294 (330)
70 4esy_A CBS domain containing m 98.5 5.7E-08 2E-12 80.2 4.0 61 201-266 102-162 (170)
71 1vr9_A CBS domain protein/ACT 98.5 2.4E-08 8.1E-13 86.0 1.1 92 165-264 30-128 (213)
72 3fv6_A YQZB protein; CBS domai 98.4 2.2E-07 7.5E-12 75.7 4.6 63 200-264 77-142 (159)
73 1jcn_A Inosine monophosphate d 98.4 3.4E-08 1.2E-12 96.2 -0.4 92 204-303 108-204 (514)
74 4fry_A Putative signal-transdu 98.4 2E-07 6.7E-12 75.6 4.1 59 201-264 75-133 (157)
75 3lfr_A Putative metal ION tran 98.4 3.4E-07 1.2E-11 72.6 5.2 60 201-265 67-126 (136)
76 3kpb_A Uncharacterized protein 98.4 2.4E-07 8.3E-12 71.5 4.2 59 203-265 61-119 (122)
77 4af0_A Inosine-5'-monophosphat 98.3 9.2E-08 3.1E-12 92.0 1.3 100 189-303 128-229 (556)
78 1pvm_A Conserved hypothetical 98.3 1.1E-06 3.7E-11 73.4 6.7 62 201-266 72-133 (184)
79 4gqw_A CBS domain-containing p 98.3 3.8E-07 1.3E-11 72.9 3.6 60 201-264 82-141 (152)
80 2rc3_A CBS domain; in SITU pro 98.3 6.4E-07 2.2E-11 70.6 4.8 59 201-264 71-129 (135)
81 1pbj_A Hypothetical protein; s 98.3 5E-07 1.7E-11 69.9 4.0 59 201-264 62-120 (125)
82 3nqr_A Magnesium and cobalt ef 98.3 6.1E-07 2.1E-11 70.1 4.4 58 202-264 67-124 (127)
83 3jtf_A Magnesium and cobalt ef 98.3 9.3E-07 3.2E-11 69.3 5.5 58 202-264 67-124 (129)
84 3lv9_A Putative transporter; C 98.2 1.2E-06 4E-11 70.3 5.8 57 203-264 87-143 (148)
85 3lhh_A CBS domain protein; str 98.2 1.5E-06 5.1E-11 71.9 6.4 58 202-264 105-162 (172)
86 3fhm_A Uncharacterized protein 98.2 1E-06 3.4E-11 72.2 5.2 61 200-265 89-149 (165)
87 3oco_A Hemolysin-like protein 98.2 1.2E-06 4.2E-11 70.7 5.5 58 202-264 84-141 (153)
88 1y5h_A Hypothetical protein RV 98.2 6.4E-07 2.2E-11 70.3 3.7 59 202-265 72-130 (133)
89 2ef7_A Hypothetical protein ST 98.2 7.9E-07 2.7E-11 69.7 4.2 58 203-264 66-123 (133)
90 2nyc_A Nuclear protein SNF4; b 98.2 7.5E-07 2.6E-11 70.6 4.1 62 201-264 74-139 (144)
91 3gby_A Uncharacterized protein 98.2 8.2E-07 2.8E-11 69.4 4.2 57 204-264 68-124 (128)
92 3sl7_A CBS domain-containing p 98.2 5.2E-07 1.8E-11 74.4 3.0 61 200-264 94-154 (180)
93 1o50_A CBS domain-containing p 98.2 5.8E-07 2E-11 73.0 3.0 59 201-264 93-151 (157)
94 3oi8_A Uncharacterized protein 98.2 9.9E-07 3.4E-11 71.7 4.4 56 202-262 101-156 (156)
95 2rih_A Conserved protein with 98.2 1.3E-06 4.6E-11 69.3 5.0 57 203-264 70-126 (141)
96 2uv4_A 5'-AMP-activated protei 98.2 9.8E-07 3.4E-11 71.2 4.2 60 203-264 86-149 (152)
97 3i8n_A Uncharacterized protein 98.2 1.5E-06 5E-11 68.2 5.0 58 202-264 70-127 (130)
98 3k2v_A Putative D-arabinose 5- 98.2 1.1E-06 3.8E-11 70.6 4.3 57 201-262 92-148 (149)
99 3lqn_A CBS domain protein; csg 98.1 2.5E-06 8.7E-11 68.3 5.5 58 201-264 84-141 (150)
100 3hf7_A Uncharacterized CBS-dom 98.1 1.2E-06 4.2E-11 68.9 3.4 58 202-264 68-125 (130)
101 3kxr_A Magnesium transporter, 98.1 2.1E-06 7.3E-11 73.4 4.5 59 202-264 114-172 (205)
102 2p9m_A Hypothetical protein MJ 98.1 1.3E-06 4.4E-11 68.9 2.8 58 202-263 71-133 (138)
103 2o16_A Acetoin utilization pro 98.1 1.9E-06 6.6E-11 70.2 3.9 58 202-264 76-133 (160)
104 3k6e_A CBS domain protein; str 98.1 1E-06 3.4E-11 72.0 1.6 58 201-264 83-140 (156)
105 2yzi_A Hypothetical protein PH 98.0 5.2E-06 1.8E-10 65.4 5.4 58 202-264 70-127 (138)
106 2emq_A Hypothetical conserved 98.0 4E-06 1.4E-10 67.6 4.4 58 201-264 80-137 (157)
107 2j9l_A Chloride channel protei 98.0 4.6E-06 1.6E-10 69.0 4.4 59 201-264 105-163 (185)
108 1yav_A Hypothetical protein BS 97.9 4.2E-06 1.4E-10 67.8 3.5 58 201-264 83-140 (159)
109 3ctu_A CBS domain protein; str 97.9 3.2E-06 1.1E-10 68.3 2.5 57 202-264 84-140 (156)
110 2yvy_A MGTE, Mg2+ transporter 97.9 6.2E-06 2.1E-10 73.6 4.1 60 202-265 197-256 (278)
111 1me8_A Inosine-5'-monophosphat 97.8 6.2E-06 2.1E-10 80.0 3.3 62 202-265 159-220 (503)
112 3org_A CMCLC; transporter, tra 97.8 1.3E-05 4.3E-10 80.0 5.4 57 205-266 569-625 (632)
113 2oux_A Magnesium transporter; 97.8 9.6E-06 3.3E-10 72.8 3.7 59 202-264 199-257 (286)
114 2pfi_A Chloride channel protei 97.8 1E-05 3.4E-10 65.5 3.2 60 202-264 82-145 (164)
115 3ocm_A Putative membrane prote 97.7 2E-05 6.7E-10 65.3 4.2 57 202-264 99-155 (173)
116 2zy9_A Mg2+ transporter MGTE; 97.7 2.6E-05 8.8E-10 75.1 4.3 59 202-264 217-275 (473)
117 4avf_A Inosine-5'-monophosphat 97.7 6.5E-06 2.2E-10 79.6 0.0 61 202-264 145-205 (490)
118 3usb_A Inosine-5'-monophosphat 97.6 2.6E-05 9.1E-10 75.7 3.8 61 201-264 172-232 (511)
119 4fxs_A Inosine-5'-monophosphat 97.6 8.7E-06 3E-10 78.8 0.1 61 202-264 147-207 (496)
120 1vrd_A Inosine-5'-monophosphat 97.4 2E-05 6.7E-10 76.2 -0.3 61 202-264 153-213 (494)
121 2d4z_A Chloride channel protei 97.4 0.00014 4.9E-09 64.0 4.9 52 208-264 193-244 (250)
122 1jcn_A Inosine monophosphate d 97.3 4E-05 1.4E-09 74.5 0.5 61 202-264 171-231 (514)
123 4af0_A Inosine-5'-monophosphat 97.3 3.7E-05 1.3E-09 74.0 0.0 58 202-263 198-255 (556)
124 1zfj_A Inosine monophosphate d 97.1 0.00029 9.8E-09 67.9 4.6 60 202-264 150-209 (491)
125 3pc3_A CG1753, isoform A; CBS, 97.0 0.00038 1.3E-08 67.7 3.9 70 191-265 435-510 (527)
126 2cu0_A Inosine-5'-monophosphat 96.9 0.00014 4.9E-09 70.1 0.0 60 202-265 148-207 (486)
127 3arc_L Photosystem II reaction 50.4 20 0.00067 21.0 3.3 25 5-29 10-35 (37)
128 1p0z_A Sensor kinase CITA; tra 30.8 29 0.00098 26.1 2.6 21 241-262 106-126 (131)
129 3k2t_A LMO2511 protein; lister 28.6 91 0.0031 20.2 4.3 36 221-258 11-46 (57)
130 3by8_A Sensor protein DCUS; hi 28.5 32 0.0011 26.3 2.5 20 241-261 111-130 (142)
131 1svj_A Potassium-transporting 27.5 75 0.0026 25.0 4.6 33 228-262 123-155 (156)
132 2qkp_A Uncharacterized protein 23.8 48 0.0016 25.6 2.8 23 238-261 108-131 (151)
No 1
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.86 E-value=1.3e-21 Score=161.45 Aligned_cols=129 Identities=19% Similarity=0.264 Sum_probs=116.1
Q ss_pred cccHHHHHHHHHhhcccccCCCCCChhHHHHHhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeee
Q 022005 164 LFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPV 243 (304)
Q Consensus 164 ~~s~eEl~~lv~~~~~e~~~~g~l~~~e~~~i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV 243 (304)
.+|++||+.+++. +.++|.++++|++++++++++.+.+|+|+|+|+.+++++++++++. ++++.+.+++++++||
T Consensus 2 ~~t~~el~~li~~----~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~-~a~~~m~~~~~~~~pV 76 (156)
T 3oi8_A 2 NASAEDVLNLLRQ----AHEQEVFDADTLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIE-RITAYVIDTAHSRFPV 76 (156)
T ss_dssp CCCHHHHHHHHHH----HHHTTSSCHHHHHHHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEE
T ss_pred CCCHHHHHHHHHh----HHhcCCcCHHHHHHHHHHhccCCCCHhheeeeHHHeEEECCCCCHH-HHHHHHHHCCCCEEEE
Confidence 4789999999984 4557999999999999999999999999999998999999999998 9999999999999999
Q ss_pred eeCCCCcEEEEEEechhcccCCc-cccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 244 YYEEPTNIIGLILVKNLLTIHPE-DEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 244 ~~~~~~~ivGiv~~kDll~~~~~-~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
++++.|+++|+|+.+|+++...+ ...+++++| +++.+++++++ +.++++.|+++
T Consensus 77 vd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~-----l~~a~~~m~~~ 131 (156)
T 3oi8_A 77 IGEDKDEVLGILHAKDLLKYMFNPEQFHLKSIL-RPAVFVPEGKS-----LTALLKEFREQ 131 (156)
T ss_dssp ESSSTTCEEEEEEGGGGGGGSSCGGGCCHHHHC-BCCCEEETTSB-----HHHHHHHHHHT
T ss_pred EcCCCCcEEEEEEHHHHHHHHHcCCcccHHHHc-CCCEEECCCCC-----HHHHHHHHHhc
Confidence 98754699999999999987543 456899995 78999999999 99999999764
No 2
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.82 E-value=4.5e-21 Score=160.78 Aligned_cols=130 Identities=22% Similarity=0.399 Sum_probs=82.9
Q ss_pred ccccHHHHHHHHHhhcccccCCCCCChhHHHHHhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceee
Q 022005 163 ALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVP 242 (304)
Q Consensus 163 ~~~s~eEl~~lv~~~~~e~~~~g~l~~~e~~~i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~P 242 (304)
+.+|++||+.+++ ++.++|.++++|++++++++.+.+.+|+|+|+|+.+++++++++|+. ++++.+.+++++++|
T Consensus 5 ~~~t~~el~~l~~----~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~p 79 (172)
T 3lhh_A 5 DNVTQEDIQAMLQ----EGSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLD-ANLRTVMQSPHSRFP 79 (172)
T ss_dssp ------------------------------------------CTTTTSEEGGGCCCEETTSCHH-HHHHHHHTCCCSEEE
T ss_pred ccCCHHHHHHHHH----HHHHcCCCCHHHHHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEE
Confidence 4689999999998 45567999999999999999999999999999999999999999998 999999999999999
Q ss_pred eeeCCCCcEEEEEEechhcccCC-ccccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 243 VYYEEPTNIIGLILVKNLLTIHP-EDEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 243 V~~~~~~~ivGiv~~kDll~~~~-~~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
|++++.++++|+|+.+|+++... +...+++++| +++.+++++++ +.++++.|+++
T Consensus 80 Vvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~-----l~~a~~~m~~~ 135 (172)
T 3lhh_A 80 VCRNNVDDMVGIISAKQLLSESIAGERLELVDLV-KNCNFVPNSLS-----GMELLEHFRTT 135 (172)
T ss_dssp EESSSTTSEEEEEEHHHHHHHHHTTCCCCGGGGC-BCCEEEETTCC-----HHHHHHHHHHH
T ss_pred EEeCCCCeEEEEEEHHHHHHHHhhcCcccHHHHh-cCCeEeCCCCC-----HHHHHHHHHHc
Confidence 99864489999999999987643 2356899997 99999999999 99999999764
No 3
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.76 E-value=4.6e-19 Score=144.33 Aligned_cols=114 Identities=18% Similarity=0.371 Sum_probs=88.7
Q ss_pred CCCCCChhHHHHHhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcc
Q 022005 183 KGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLT 262 (304)
Q Consensus 183 ~~g~l~~~e~~~i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~ 262 (304)
++|.++++|++++++++++.+.+|+|+|+|+.+++++++++++. ++++.+.+++++++||++++.|+++|+++.+|+++
T Consensus 2 ~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~ 80 (148)
T 3lv9_A 2 NAGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEE-KILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYN 80 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHH-HHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHH
T ss_pred CCCccCHHHHHHHHHHhccCCCCHHHccccHHHeEEECCCCCHH-HHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHH
Confidence 35899999999999999999999999999999999999999998 99999999999999999864479999999999987
Q ss_pred cCCcc-ccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 263 IHPED-EVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 263 ~~~~~-~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
...++ ..++.++| +++.+++++++ +.++++.|+++
T Consensus 81 ~~~~~~~~~v~~~m-~~~~~v~~~~~-----l~~~~~~m~~~ 116 (148)
T 3lv9_A 81 QKINENKIELEEIL-RDIIYISENLT-----IDKALERIRKE 116 (148)
T ss_dssp HHHHHSCCCGGGTC-BCCEEEETTSB-----HHHHHHHHHHH
T ss_pred HHhcCCCccHHHhc-CCCeEECCCCC-----HHHHHHHHHhc
Confidence 64332 56899997 99999999999 99999999764
No 4
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.74 E-value=2.2e-18 Score=144.95 Aligned_cols=115 Identities=20% Similarity=0.273 Sum_probs=99.4
Q ss_pred ccCCCCCChhHHHHHhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechh
Q 022005 181 AGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNL 260 (304)
Q Consensus 181 ~~~~g~l~~~e~~~i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDl 260 (304)
++++|.++++|++++++++++.+.+|+|+|+|+.+++++++++++. ++++.+.+++++++||++++.|+++|+|+.+|+
T Consensus 13 ~~~~g~l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl 91 (173)
T 3ocm_A 13 MPAVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAA-TIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDL 91 (173)
T ss_dssp -----CCCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHH-HHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHH
T ss_pred HHhcCCcCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHH-HHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHH
Confidence 3456999999999999999999999999999999999999999998 999999999999999998655799999999999
Q ss_pred cccCC-ccccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 261 LTIHP-EDEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 261 l~~~~-~~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
+.... +...++. |++++.+++++++ +.++++.|+++
T Consensus 92 ~~~~~~~~~~~v~--~~~~~~~v~~~~~-----l~~al~~m~~~ 128 (173)
T 3ocm_A 92 VADLITEGRVRRN--RLRDPIIVHESIG-----ILRLMDTLKRS 128 (173)
T ss_dssp HHHHHHHSSCCGG--GSBCCCEECGGGC-----HHHHHHHHHHS
T ss_pred HHHHhcCCcchhH--hcCCCeEECCCCc-----HHHHHHHHHHc
Confidence 87542 2345677 4799999999999 99999999764
No 5
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.65 E-value=1.9e-17 Score=135.68 Aligned_cols=110 Identities=20% Similarity=0.329 Sum_probs=94.6
Q ss_pred CChhHHHHHhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeee-eCCCCcEEEEEEechhcccCC
Q 022005 187 LTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVY-YEEPTNIIGLILVKNLLTIHP 265 (304)
Q Consensus 187 l~~~e~~~i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~-~~~~~~ivGiv~~kDll~~~~ 265 (304)
++++|++++++++.+++.+|+|+|+|+.+++++++++++. ++++.+.+++++++||+ +++.|+++|+|+.+|+++...
T Consensus 3 l~~~e~~~i~~~~~l~~~~v~~iM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~ 81 (153)
T 3oco_A 3 ADEEDANFMQRAFEMNDKVASDVMVDRTSMSVVDVDETIA-DALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQAR 81 (153)
T ss_dssp -----CCHHHHHHHHHHCBHHHHSEEGGGCCCEETTSBHH-HHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHH
T ss_pred cCHHHHHHHHHhcccCCCEeeeEecchhheEEEcCCCCHH-HHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHh
Confidence 5678899999999999999999999988999999999998 99999999999999999 544479999999999987542
Q ss_pred -ccccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 266 -EDEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 266 -~~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
+...+++++| +++.+++++++ +.++++.|+++
T Consensus 82 ~~~~~~v~~~m-~~~~~v~~~~~-----l~~~~~~m~~~ 114 (153)
T 3oco_A 82 IDDKAKISTIM-RDIVSVPENMK-----VPDVMEEMSAH 114 (153)
T ss_dssp HHTTSBGGGTC-BCCEEEETTSB-----HHHHHHHHHHT
T ss_pred cCCCCcHHHHh-CCCeEECCCCC-----HHHHHHHHHHc
Confidence 2256899997 99999999999 99999999764
No 6
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.59 E-value=2.1e-15 Score=119.89 Aligned_cols=95 Identities=34% Similarity=0.464 Sum_probs=84.9
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCccccCcccccccccce
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPR 281 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~~~~~~~~~ 281 (304)
++.+|+|+|+|+.+++++++++++. ++++.+.+++++++||++++.|+++|+++.+|+++...++..+++++| +++.+
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~v~~~m-~~~~~ 80 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLP-QLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEPALDIRSLV-RPAVF 80 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHH-HHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCTTSCGGGGC-BCCCE
T ss_pred CCCCHHHhCccHHHeEEECCCCCHH-HHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccCCcCHHHHh-CCCeE
Confidence 5789999999999999999999998 999999999999999998645899999999999987655567899995 78999
Q ss_pred ecCCCCCchhHHHHHHHHHhhc
Q 022005 282 YLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 282 v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
++++++ +.++++.|+++
T Consensus 81 v~~~~~-----l~~~~~~m~~~ 97 (129)
T 3jtf_A 81 IPEVKR-----LNVLLREFRAS 97 (129)
T ss_dssp EETTCB-----HHHHHHHHHTS
T ss_pred eCCCCc-----HHHHHHHHHhc
Confidence 999999 99999999764
No 7
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.57 E-value=1.1e-15 Score=126.20 Aligned_cols=103 Identities=16% Similarity=0.204 Sum_probs=86.7
Q ss_pred HHhhhh-ccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCc------
Q 022005 194 IIAGAL-ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE------ 266 (304)
Q Consensus 194 ~i~~~l-~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~------ 266 (304)
|+.+.+ ++-..+++++|+|+.+++++++++|++ ++++.+.++||+++||++++ |+++|+++.+|+++....
T Consensus 4 mi~~~~e~~l~~~~~~iM~P~~~v~~v~~~~t~~-~a~~~m~~~~~s~~pVvd~~-~~lvGiit~~Di~~~~~~~~~~~~ 81 (156)
T 3k6e_A 4 MIAKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQE 81 (156)
T ss_dssp HHHHHHHHHHHTTGGGGEEETTSSCCEETTSBHH-HHHHHHTTSSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHH
T ss_pred hHHHHHHHHhhccHHHhCcchhHeEEECCcCCHH-HHHHHHHHcCCcEEEEEcCC-CcEEEEEEecchhhhhhhcccccc
Confidence 444444 344568999999999999999999998 99999999999999999864 899999999999764211
Q ss_pred --cccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 267 --DEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 267 --~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
...++.++|.+++.+++++++ +.++++.|+++
T Consensus 82 ~~~~~~v~~im~~~~~~v~~~~~-----l~~~~~~m~~~ 115 (156)
T 3k6e_A 82 IMADTDIVHMTKTDVAVVSPDFT-----ITEVLHKLVDE 115 (156)
T ss_dssp HHTTSBGGGTCBCSCCCBCTTCC-----HHHHHHHTTTS
T ss_pred cccccCHHHhhcCCceecccccH-----HHHHHHHHHHc
Confidence 246899999999999999999 99999999764
No 8
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.55 E-value=1.7e-15 Score=120.80 Aligned_cols=94 Identities=19% Similarity=0.271 Sum_probs=82.2
Q ss_pred cccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCcc----ccCcccccccc
Q 022005 203 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPED----EVPVKSVTIRR 278 (304)
Q Consensus 203 ~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~----~~~v~~~~~~~ 278 (304)
+++|+|+|+|+.+++++++++++. ++++.+.+++++++||++++.|+++|+++.+|+++...++ ..+++++| ++
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m-~~ 78 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWK-SIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAA-DE 78 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHH-HHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHS-BC
T ss_pred CcCHHHhCccHHHEEEEcCCCCHH-HHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhc-cC
Confidence 368999999999999999999998 9999999999999999976558999999999998764332 24688885 89
Q ss_pred cceecCCCCCchhHHHHHHHHHhhc
Q 022005 279 IPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 279 ~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
+.+++++++ +.++++.|+++
T Consensus 79 ~~~v~~~~~-----l~~~~~~m~~~ 98 (130)
T 3hf7_A 79 IYFVPEGTP-----LSTQLVKFQRN 98 (130)
T ss_dssp CCEEETTCB-----HHHHHHHHHHH
T ss_pred CeEeCCCCc-----HHHHHHHHHhc
Confidence 999999999 99999999764
No 9
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.54 E-value=9.4e-15 Score=117.22 Aligned_cols=94 Identities=26% Similarity=0.347 Sum_probs=82.6
Q ss_pred cccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCC---ccccCccccccccc
Q 022005 203 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP---EDEVPVKSVTIRRI 279 (304)
Q Consensus 203 ~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~---~~~~~v~~~~~~~~ 279 (304)
+.+|+|+|+|+.+++++++++|+. ++++.+.+++++++||++++.|+++|+++.+|+++... ....+++++| +++
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m-~~~ 79 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPR-EFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLL-RPA 79 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTC-BCC
T ss_pred CCChHhccccHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHc-CCC
Confidence 678999999999999999999998 99999999999999999865479999999999997643 2356899995 779
Q ss_pred ceecCCCCCchhHHHHHHHHHhhc
Q 022005 280 PRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 280 ~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
.+++++++ +.++++.|+++
T Consensus 80 ~~v~~~~~-----l~~~~~~m~~~ 98 (136)
T 3lfr_A 80 TFVPESKR-----LNVLLREFRAN 98 (136)
T ss_dssp CEEETTCB-----HHHHHHHHHHH
T ss_pred eEECCCCc-----HHHHHHHHHhc
Confidence 99999999 99999999764
No 10
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.53 E-value=2.6e-15 Score=119.39 Aligned_cols=97 Identities=23% Similarity=0.338 Sum_probs=81.9
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCc--cccCccccccc
Q 022005 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE--DEVPVKSVTIR 277 (304)
Q Consensus 200 ~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~--~~~~v~~~~~~ 277 (304)
++++.+|+|+|+|+.+++++++++++. ++++.+.+++++++||++++.|+++|+++.+|+++...+ ...+++++| +
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~~~v~~~m-~ 79 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTIN-EFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSGQKQLGAVM-R 79 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHH-HHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTTTSBHHHHS-E
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCCcCCHHHHh-c
Confidence 467889999999998999999999998 999999999999999998655899999999999876422 256889996 8
Q ss_pred ccceecCCCCCchhHHHHHHHHHhhc
Q 022005 278 RIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 278 ~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
++.+++++++ +.++++.|+++
T Consensus 80 ~~~~v~~~~~-----l~~~~~~m~~~ 100 (130)
T 3i8n_A 80 PIQVVLNNTA-----LPKVFDQMMTH 100 (130)
T ss_dssp ECCEEETTSC-----HHHHHHHHHHH
T ss_pred CCcCcCCCCc-----HHHHHHHHHHc
Confidence 8999999999 99999999764
No 11
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.51 E-value=9.1e-14 Score=119.80 Aligned_cols=106 Identities=8% Similarity=0.087 Sum_probs=95.8
Q ss_pred CChhHHHHHhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhc---CCceeeeeeCCCCcEEEEEEechhccc
Q 022005 187 LTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEK---GHSRVPVYYEEPTNIIGLILVKNLLTI 263 (304)
Q Consensus 187 l~~~e~~~i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~---~~sr~PV~~~~~~~ivGiv~~kDll~~ 263 (304)
++++|++++++++.+++.+|+++|+| +++++++++|+. ++++.+.++ +++.+||++++ |+++|+|+.+|++..
T Consensus 37 l~~~e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-eal~~~~~~~~~~~~~~~Vvd~~-~~lvGivt~~dll~~ 112 (205)
T 3kxr_A 37 MGERQRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVA-QAQRFFRRIELDCNDNLFIVDEA-DKYLGTVRRYDIFKH 112 (205)
T ss_dssp SCHHHHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHH-HHHHHHHHCCCTTCCEEEEECTT-CBEEEEEEHHHHTTS
T ss_pred CCHHHHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHH-HHHHHHHhhCccCeeEEEEEcCC-CeEEEEEEHHHHHhC
Confidence 68899999999999999999999997 788999999998 999999987 78999999864 899999999999875
Q ss_pred CCccccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 264 HPEDEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 264 ~~~~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
.. ..+++++|.+++.+++++++ +.++++.|+++
T Consensus 113 ~~--~~~v~~im~~~~~~v~~~~~-----l~~a~~~m~~~ 145 (205)
T 3kxr_A 113 EP--HEPLISLLSEDSRALTANTT-----LLDAAEAIEHS 145 (205)
T ss_dssp CT--TSBGGGGCCSSCCCEETTSC-----HHHHHHHHHTS
T ss_pred CC--cchHHHHhcCCCeEECCCCC-----HHHHHHHHHhc
Confidence 33 45899998889999999999 99999999764
No 12
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.51 E-value=1.8e-14 Score=113.99 Aligned_cols=95 Identities=27% Similarity=0.429 Sum_probs=82.2
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCC--ccccCccccccccc
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP--EDEVPVKSVTIRRI 279 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~--~~~~~v~~~~~~~~ 279 (304)
++.+|+|+|+|+.+++++++++++. ++++.+.+++++++||++++.|+++|+++.+|+++... ....+++++| +++
T Consensus 1 ~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m-~~~ 78 (127)
T 3nqr_A 1 ADQRVRDIMIPRSQMITLKRNQTLD-ECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVL-RTA 78 (127)
T ss_dssp --CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHC-BCC
T ss_pred CCcCHHHhcccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHc-CCC
Confidence 3678999999988899999999998 99999999999999999865479999999999997642 2356889995 778
Q ss_pred ceecCCCCCchhHHHHHHHHHhhc
Q 022005 280 PRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 280 ~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
.+++++++ +.++++.|+++
T Consensus 79 ~~v~~~~~-----l~~a~~~m~~~ 97 (127)
T 3nqr_A 79 VVVPESKR-----VDRMLKEFRSQ 97 (127)
T ss_dssp CEEETTCB-----HHHHHHHHHHT
T ss_pred eEECCCCc-----HHHHHHHHHhc
Confidence 99999999 99999999764
No 13
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.46 E-value=1.3e-13 Score=114.71 Aligned_cols=102 Identities=15% Similarity=0.178 Sum_probs=85.7
Q ss_pred HHHHHhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCc----
Q 022005 191 ETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE---- 266 (304)
Q Consensus 191 e~~~i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~---- 266 (304)
++..+.+. +++++|+|+|++ +++++++++|+. ++++.|.+++++++||+|++ |+++|+|+.+|+++....
T Consensus 7 ~~~~~~~~--l~~~~V~diM~~--~v~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dll~~~~~~~~~ 80 (170)
T 4esy_A 7 RRRAIARA--IRQVPIRDILTS--PVVTVREDDTLD-AVAKTMLEHQIGCAPVVDQN-GHLVGIITESDFLRGSIPFWIY 80 (170)
T ss_dssp HHHHHHHH--HHTSBGGGGCCS--CCCCEETTSBHH-HHHHHHHHTTCSEEEEECTT-SCEEEEEEGGGGGGGTCCTTHH
T ss_pred HHHHHHHH--HcCCCHHHhcCC--CCcEECCcCcHH-HHHHHHHHcCCeEEEEEcCC-ccEEEEEEHHHHHHHHhhcccc
Confidence 34444443 467899999986 788999999999 99999999999999999865 899999999999864321
Q ss_pred ----------------------cccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 267 ----------------------DEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 267 ----------------------~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
...+++++|.+++.+++++++ +.++++.|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~-----l~~a~~~m~~~ 134 (170)
T 4esy_A 81 EASEILSRAIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDS-----VGSIADQMRRH 134 (170)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSB-----HHHHHHHHHHT
T ss_pred chhhhhhhccchhhHHhhhccccccchhhhcccCcccCCcchh-----HHHHHHHHHHc
Confidence 134788999999999999999 99999999764
No 14
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.46 E-value=4.8e-14 Score=129.34 Aligned_cols=113 Identities=10% Similarity=0.138 Sum_probs=93.7
Q ss_pred CCCChhHHHHHhhhhcc-ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhccc
Q 022005 185 GELTHDETTIIAGALEL-TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 263 (304)
Q Consensus 185 g~l~~~e~~~i~~~l~l-~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~ 263 (304)
+.++++|++++++++++ ++.+|+|+|+|+.+++++++++|+. ++++.+.+++|+++||++++.|+++|+++.+|++..
T Consensus 2 ~~~~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~-~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~ 80 (334)
T 2qrd_G 2 MDVQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVK-TSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNV 80 (334)
T ss_dssp CSHHHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHH-HHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHH
Confidence 34677899999999985 4599999999999999999999998 999999999999999999766899999999999863
Q ss_pred C--------Ccc------ccCccc-------cccccc--ceecCCCCCchhHHHHHHHHHhhc
Q 022005 264 H--------PED------EVPVKS-------VTIRRI--PRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 264 ~--------~~~------~~~v~~-------~~~~~~--~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
. ... ..++.+ +|.+++ .+++++++ +.++++.|+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~-----~~~a~~~~~~~ 138 (334)
T 2qrd_G 81 IKYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHS-----LMDACLAMSKS 138 (334)
T ss_dssp HHHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSB-----HHHHHHHHHHS
T ss_pred HHHHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCc-----HHHHHHHHHHC
Confidence 2 111 222222 356777 89999999 99999999763
No 15
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.43 E-value=2.6e-13 Score=131.08 Aligned_cols=125 Identities=14% Similarity=0.152 Sum_probs=108.9
Q ss_pred cccHHHHHHHHHhhcccccCC---------CCCChhHHHHHhhhhccccccccccccccceEEEEeCCCCccHHHHHHHH
Q 022005 164 LFRRAELKTLVNLHGNEAGKG---------GELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLIL 234 (304)
Q Consensus 164 ~~s~eEl~~lv~~~~~e~~~~---------g~l~~~e~~~i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~ 234 (304)
.+++||+..+++.. .++ +.++++|++.+++++++++.+|+++|+| +++++++++|++ ++++.+.
T Consensus 110 ~l~~dd~~~ll~~l----~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~-ea~~~~~ 182 (473)
T 2zy9_A 110 ELSLDDLADALQAV----RKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLR 182 (473)
T ss_dssp HSCHHHHHHHHHHH----HHSCHHHHHHHTTSSCHHHHHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHH-HHHHHHH
T ss_pred hCCHHHHHHHHHhC----CHhHHHHHHHHHhcCCHHHHHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHH-HHHHHHH
Confidence 46788888888742 223 7899999999999999999999999997 899999999998 9999999
Q ss_pred hc-----CCceeeeeeCCCCcEEEEEEechhcccCCccccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 235 EK-----GHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 235 ~~-----~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
++ +++++||+|++ ++++|+++.+|++... .+.+++++|.+++.+++++++ +.++++.|+++
T Consensus 183 ~~~~~~~~~~~ipVvd~~-~~lvGiVt~~Dll~~~--~~~~v~dim~~~~~~v~~~~~-----l~ea~~~m~~~ 248 (473)
T 2zy9_A 183 RAAPDAETIYYIYVVDEK-GRLKGVLSLRDLIVAD--PRTRVAEIMNPKVVYVRTDTD-----QEEVARLMADY 248 (473)
T ss_dssp HHGGGCSEEEEEEEECTT-SBEEEEEEHHHHHHSC--TTSBGGGTSBSSCCCEESSSB-----HHHHHHHHHHH
T ss_pred hccCCcCceeEEEEECCC-CcEEEEEEHHHHhcCC--CCCcHHHHhCCCCeEEeCCCc-----HHHHHHHHHhc
Confidence 86 47999999865 8999999999998753 356899998789999999999 99999999864
No 16
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.42 E-value=2.8e-13 Score=121.94 Aligned_cols=108 Identities=14% Similarity=0.168 Sum_probs=96.9
Q ss_pred CCCChhHHHHHhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhc-----CCceeeeeeCCCCcEEEEEEech
Q 022005 185 GELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEK-----GHSRVPVYYEEPTNIIGLILVKN 259 (304)
Q Consensus 185 g~l~~~e~~~i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~-----~~sr~PV~~~~~~~ivGiv~~kD 259 (304)
|.++.+++..+.+++.+.+.+|+++|+| +++++++++|+. ++++.+.++ +++++||++++ |+++|+|+.+|
T Consensus 116 ~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~~Vvd~~-~~lvGivt~~d 191 (278)
T 2yvy_A 116 DLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLRRAAPDAETIYYIYVVDEK-GRLKGVLSLRD 191 (278)
T ss_dssp HHSCHHHHHHHHHHHHSCTTBGGGTCBS--CCCEECTTSBHH-HHHHHHHHHTTTCSCSSEEEEECTT-CBEEEEEEHHH
T ss_pred HcCCHHHHHHHHHHHCCCcchHHhhcCC--CceEECCCCcHH-HHHHHHHHccCCccceeEEEEECCC-CCEEEEEEHHH
Confidence 4578899999999999999999999997 788999999998 999999987 78999999865 89999999999
Q ss_pred hcccCCccccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 260 LLTIHPEDEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 260 ll~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
++... ...++.++|.+++.+|+++++ +.++++.|+++
T Consensus 192 ll~~~--~~~~v~~im~~~~~~v~~~~~-----l~~a~~~m~~~ 228 (278)
T 2yvy_A 192 LIVAD--PRTRVAEIMNPKVVYVRTDTD-----QEEVARLMADY 228 (278)
T ss_dssp HHHSC--TTCBSTTTSBSSCCCEETTSB-----HHHHHHHHHHH
T ss_pred HhcCC--CCCcHHHHhCCCCeEEeCCCC-----HHHHHHHHHhc
Confidence 98653 346899998789999999999 99999999764
No 17
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.40 E-value=2.9e-13 Score=110.55 Aligned_cols=102 Identities=20% Similarity=0.283 Sum_probs=83.5
Q ss_pred HhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCc--------
Q 022005 195 IAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-------- 266 (304)
Q Consensus 195 i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~-------- 266 (304)
.++...+.+.+|+|+|+|+.+++++++++++. ++++.+.+++++++||++++ |+++|+++.+|+++....
T Consensus 2 ~~~~~~l~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~ 79 (157)
T 2emq_A 2 TWEHNEFMQMTVKPFLIPADKVAHVQPGNYLD-HALLVLTKTGYSAIPVLDTS-YKLHGLISMTMMMDAILGLERIEFER 79 (157)
T ss_dssp --------CCBSTTTCEEGGGSCCBCTTSBHH-HHHHHHHHSSSSEEEEECTT-CCEEEEEEHHHHHHHSBCSSSBCGGG
T ss_pred chhHhhHhhCcHHhhccCCccceEECCCCcHH-HHHHHHHHCCceEEEEEcCC-CCEEEEeeHHHHHHHHhcccccchHH
Confidence 34556678899999999877888999999998 99999999999999999864 899999999999875432
Q ss_pred -cccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 267 -DEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 267 -~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
...++.++|.+++.+++++++ +.++++.|.++
T Consensus 80 ~~~~~v~~~m~~~~~~v~~~~~-----l~~a~~~m~~~ 112 (157)
T 2emq_A 80 LETMKVEEVMNRNIPRLRLDDS-----LMKAVGLIVNH 112 (157)
T ss_dssp GGTCBGGGTCBCCCCEEETTSB-----HHHHHHHHHHS
T ss_pred hcCCcHHHHhCCCCceecCCCc-----HHHHHHHHhhC
Confidence 246899998889999999999 99999999764
No 18
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.40 E-value=1.5e-13 Score=112.30 Aligned_cols=102 Identities=14% Similarity=0.151 Sum_probs=87.5
Q ss_pred HhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCc--------
Q 022005 195 IAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-------- 266 (304)
Q Consensus 195 i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~-------- 266 (304)
-.+..++...+|+|+|+|+.+++++++++++. ++.+.+.+++++++||++++ |+++|+++.+|+++....
T Consensus 6 ~~~~~~l~~~~v~dim~p~~~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~ 83 (156)
T 3ctu_A 6 AKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQEIM 83 (156)
T ss_dssp HHHHHHHHHTTGGGGEEEGGGCCCEETTSBHH-HHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHH
T ss_pred cHHHHHHHHHHHHHHcCcccCceEECCCCCHH-HHHHHHHHCCCceEeEECCC-CEEEEEEcHHHHHHHHHhcccccccc
Confidence 34455677789999999999999999999998 99999999999999999864 899999999999875321
Q ss_pred cccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 267 DEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 267 ~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
...++.++|.+++.+++++++ +.++++.|.++
T Consensus 84 ~~~~v~~~m~~~~~~v~~~~~-----l~~a~~~~~~~ 115 (156)
T 3ctu_A 84 ADTDIVHMTKTDVAVVSPDFT-----ITEVLHKLVDE 115 (156)
T ss_dssp TTSBGGGGCBCSCCCBCSSCC-----HHHHHHHTTTS
T ss_pred ccCcHHHhccCCceeeCCCCc-----HHHHHHHHHHc
Confidence 146899998889999999999 99999999753
No 19
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.39 E-value=2e-13 Score=110.75 Aligned_cols=99 Identities=19% Similarity=0.236 Sum_probs=86.0
Q ss_pred hhccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCC---------ccc
Q 022005 198 ALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP---------EDE 268 (304)
Q Consensus 198 ~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~---------~~~ 268 (304)
.-.+.+.+|+|+|+|+.+++++++++++. ++++.+.+++++++||++++ |+++|+|+.+|+++... ...
T Consensus 9 ~~~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~ 86 (150)
T 3lqn_A 9 KDEFQQIFVKDLMISSEKVAHVQIGNGLE-HALLVLVKSGYSAIPVLDPM-YKLHGLISTAMILDGILGLERIEFERLEE 86 (150)
T ss_dssp HHHHHHCBHHHHSEEGGGSCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHTBCSSSBCGGGGGG
T ss_pred HHhhhcCChhhcccCCCceEEECCCCcHH-HHHHHHHHcCCcEEEEECCC-CCEEEEEEHHHHHHHHHhhcccchhHHhc
Confidence 34567789999999987889999999998 99999999999999999864 89999999999986542 124
Q ss_pred cCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 269 VPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 269 ~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
.++.++|.+++.+++++++ +.++++.|.++
T Consensus 87 ~~v~~~m~~~~~~v~~~~~-----l~~a~~~~~~~ 116 (150)
T 3lqn_A 87 MKVEQVMKQDIPVLKLEDS-----FAKALEMTIDH 116 (150)
T ss_dssp CBGGGTCBSSCCEEETTCB-----HHHHHHHHHHC
T ss_pred CCHHHHhcCCCceeCCCCC-----HHHHHHHHHhC
Confidence 6899998889999999999 99999999764
No 20
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.38 E-value=2.3e-13 Score=110.58 Aligned_cols=93 Identities=18% Similarity=0.194 Sum_probs=82.1
Q ss_pred ccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCc----cccCccccccccc
Q 022005 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE----DEVPVKSVTIRRI 279 (304)
Q Consensus 204 ~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~----~~~~v~~~~~~~~ 279 (304)
++|+|+|+|+.+++++++++++. ++++.+.+++++++||++++ |+++|+|+.+|+++...+ ...++.++|.+++
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~ 105 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLR-DALLEITRKNLGMTAICDDD-MNIIGIFTDGDLRRVFDTGVDMRDASIADVMTRGG 105 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHH-HHHHHHHHHTSSEEEEECTT-CBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEESC
T ss_pred cCHHHHhcCCCCCeEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CcEEEEecHHHHHHHHhcCCCcccCcHHHHcCCCC
Confidence 58999999877889999999998 99999999999999999864 899999999999875322 2468899988889
Q ss_pred ceecCCCCCchhHHHHHHHHHhhc
Q 022005 280 PRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 280 ~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
.+++++++ +.++++.|.++
T Consensus 106 ~~v~~~~~-----l~~a~~~m~~~ 124 (149)
T 3k2v_A 106 IRIRPGTL-----AVDALNLMQSR 124 (149)
T ss_dssp CEECTTCB-----HHHHHHHHHHH
T ss_pred eEECCCCC-----HHHHHHHHHHc
Confidence 99999999 99999999763
No 21
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.37 E-value=1.9e-13 Score=125.22 Aligned_cols=114 Identities=10% Similarity=0.228 Sum_probs=88.9
Q ss_pred cCCCCCChhHHHHHhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhc
Q 022005 182 GKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLL 261 (304)
Q Consensus 182 ~~~g~l~~~e~~~i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll 261 (304)
+++|.+++.+++.+++. |.+.+|+|+|+|+.+++++++++|+. ++++.+.+++++++||++++.++++|+++.+|++
T Consensus 15 ~~~~~~~~~~~~~~~~~--l~~~~v~dim~p~~~v~~v~~~~~v~-~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll 91 (330)
T 2v8q_E 15 EHSQETPESNSSVYTTF--MKSHRCYDLIPTSSKLVVFDTSLQVK-KAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFI 91 (330)
T ss_dssp --------CCSCHHHHH--HHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHH
T ss_pred hHhhhccchhhHHHHHH--HHcCcHhhhccCCCcEEEEeCCCcHH-HHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHH
Confidence 34577777777778777 56889999999999999999999998 9999999999999999997667999999999997
Q ss_pred ccCCc------------ccc-------CcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 262 TIHPE------------DEV-------PVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 262 ~~~~~------------~~~-------~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
..... ... ++.++|.+++.+++++++ +.++++.|+++
T Consensus 92 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~-----~~~a~~~~~~~ 147 (330)
T 2v8q_E 92 NILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNAS-----LFDAVSSLIRN 147 (330)
T ss_dssp HHHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSB-----HHHHHHHHHHH
T ss_pred HHHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCC-----HHHHHHHHHHC
Confidence 63210 011 224567889999999999 99999999753
No 22
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.35 E-value=1.5e-13 Score=125.48 Aligned_cols=115 Identities=14% Similarity=0.211 Sum_probs=94.7
Q ss_pred CCCCCChhHHHHHhhhhcc-ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhc
Q 022005 183 KGGELTHDETTIIAGALEL-TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLL 261 (304)
Q Consensus 183 ~~g~l~~~e~~~i~~~l~l-~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll 261 (304)
+.|.++++|+++++++++| .+.+++|+|+|+.++++++.++|+. ++++.+.+++++++||++++.++++|+++.+|++
T Consensus 8 ~~~~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~-~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~ 86 (323)
T 3t4n_C 8 SQEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVK-KSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFI 86 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHH-HHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHH-HHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHH
Confidence 4477889999999999998 9999999999999999999999999 9999999999999999997767999999999987
Q ss_pred ccCC-----cc---------ccCcc------cccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 262 TIHP-----ED---------EVPVK------SVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 262 ~~~~-----~~---------~~~v~------~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
.... .. ...++ ++|.+++.+++++++ +.++++.|.++
T Consensus 87 ~~l~~~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~-----l~~a~~~m~~~ 143 (323)
T 3t4n_C 87 NVIQYYFSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRP-----LFEACLKMLES 143 (323)
T ss_dssp HHHHHHHHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSB-----HHHHHHHHHHH
T ss_pred HHHHHHHcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCc-----HHHHHHHHHhC
Confidence 6320 00 01122 234578899999999 99999999764
No 23
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.32 E-value=1.5e-12 Score=105.15 Aligned_cols=95 Identities=17% Similarity=0.198 Sum_probs=81.8
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCC----------------
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP---------------- 265 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~---------------- 265 (304)
...+|+|+|+|+.+++++++++++. ++++.+.+++++++||++++ ++++|+++.+|+++...
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~ 80 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVD-EALELLVENRITGFPVIDED-WKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLS 80 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHTTCC----CCHHHHHHHTC--
T ss_pred ceEEhhhccCCCCCCeEECCCCcHH-HHHHHHHHcCCceEEEEeCC-CeEEEEEEHHHHHHhhcccCcccchHHHHHHHH
Confidence 4578999999987899999999998 99999999999999999865 89999999999986421
Q ss_pred -ccccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 266 -EDEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 266 -~~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
....++.++|.+++.+++++++ +.++++.|.++
T Consensus 81 ~~~~~~v~~~m~~~~~~v~~~~~-----l~~a~~~~~~~ 114 (152)
T 4gqw_A 81 KTNGKLVGDLMTPAPLVVEEKTN-----LEDAAKILLET 114 (152)
T ss_dssp ---CCBHHHHSEESCCCEESSSB-----HHHHHHHHHHS
T ss_pred HhccccHHHhcCCCceEECCCCc-----HHHHHHHHHHC
Confidence 1235789998788899999999 99999999763
No 24
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.30 E-value=5.3e-12 Score=100.66 Aligned_cols=96 Identities=14% Similarity=0.217 Sum_probs=82.3
Q ss_pred hccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhc-ccCCc---cccCcccc
Q 022005 199 LELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLL-TIHPE---DEVPVKSV 274 (304)
Q Consensus 199 l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll-~~~~~---~~~~v~~~ 274 (304)
+.+.+.+|+|+|++ ++.++++++++. ++.+.+.+++++.+||++++ |+++|+++.+|++ ..... ...++.++
T Consensus 2 ~~l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~ 77 (138)
T 2yzi_A 2 VMDMKAPIKVYMTK--KLLGVKPSTSVQ-EASRLMMEFDVGSLVVINDD-GNVVGFFTKSDIIRRVIVPGLPYDIPVERI 77 (138)
T ss_dssp -CCTTSBGGGTCBC--CCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTCCCTTSBGGGT
T ss_pred cchhhhhHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHhcCCcccCCHHHH
Confidence 46788999999985 788999999998 99999999999999999854 8999999999997 33321 24689999
Q ss_pred cccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 275 TIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 275 ~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
|.+++.+++++++ +.++++.|.++
T Consensus 78 m~~~~~~v~~~~~-----l~~~~~~m~~~ 101 (138)
T 2yzi_A 78 MTRNLITANVNTP-----LGEVLRKMAEH 101 (138)
T ss_dssp CBCSCCEEETTSB-----HHHHHHHHHHH
T ss_pred hhCCCeEECCCCc-----HHHHHHHHHhc
Confidence 8889999999999 99999999753
No 25
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.29 E-value=1.6e-12 Score=101.39 Aligned_cols=91 Identities=10% Similarity=0.172 Sum_probs=80.2
Q ss_pred ccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCccccCcccccccccceec
Q 022005 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRYL 283 (304)
Q Consensus 204 ~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~~~~~~~~~v~ 283 (304)
++|+|+|++ ++.++++++++. ++++.+.+++++++||++++ |+++|+++.+|+++....+..++.++|.+++.+++
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~v~~~~~~~~~~v~ 76 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIM-EAAKILIKHNINHLPIVDEH-GKLVGIITSWDIAKALAQNKKTIEEIMTRNVITAH 76 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHH-HHHHHHHHHTCSCEEEECTT-SBEEEEECHHHHHHHHHTTCCBGGGTSBSSCCCEE
T ss_pred CchHHhhCC--CCEEeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CCEEEEEEHHHHHHHHHhcccCHHHHhcCCCeEEC
Confidence 478999986 678899999998 99999999999999999864 89999999999987654445589999888999999
Q ss_pred CCCCCchhHHHHHHHHHhhc
Q 022005 284 ISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 284 ~~~~~~~~~l~~~l~~m~~~ 303 (304)
++++ +.++++.|.++
T Consensus 77 ~~~~-----l~~~~~~~~~~ 91 (122)
T 3kpb_A 77 EDEP-----VDHVAIKMSKY 91 (122)
T ss_dssp TTSB-----HHHHHHHHHHH
T ss_pred CCCC-----HHHHHHHHHHh
Confidence 9999 99999999753
No 26
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.29 E-value=1.6e-12 Score=106.61 Aligned_cols=97 Identities=19% Similarity=0.328 Sum_probs=84.0
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCc---------cccC
Q 022005 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE---------DEVP 270 (304)
Q Consensus 200 ~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~---------~~~~ 270 (304)
.+.+.+|+|+|+|+.+++++++++++. ++++.+.+++++++||++++ ++++|+++.+|+++.... ...+
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~ 87 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLE-HALLVLTKTGYTAIPVLDPS-YRLHGLIGTNMIMNSIFGLERIEFEKLDQIT 87 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEEHHHHHHHHBCSSSBCGGGTTTSB
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CCEEEEeEHHHHHHHhhhhcccchhhhccCC
Confidence 567789999999877889999999998 99999999999999999864 799999999999864321 2468
Q ss_pred cccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 271 VKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 271 v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
+.++|.+++.+++++++ +.++++.|.++
T Consensus 88 v~~~m~~~~~~v~~~~~-----l~~a~~~m~~~ 115 (159)
T 1yav_A 88 VEEVMLTDIPRLHINDP-----IMKGFGMVINN 115 (159)
T ss_dssp HHHHSBCSCCEEETTSB-----HHHHHHHTTTC
T ss_pred HHHhcCCCCceEcCCCC-----HHHHHHHHHhC
Confidence 89998889999999999 99999999753
No 27
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.28 E-value=9.9e-12 Score=112.36 Aligned_cols=108 Identities=18% Similarity=0.195 Sum_probs=96.3
Q ss_pred CCCChhHHHHHhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhc-----CCceeeeeeCCCCcEEEEEEech
Q 022005 185 GELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEK-----GHSRVPVYYEEPTNIIGLILVKN 259 (304)
Q Consensus 185 g~l~~~e~~~i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~-----~~sr~PV~~~~~~~ivGiv~~kD 259 (304)
+.++.+|+..+.+++...+.+|+++|++ +++++++++|+. ++++.+.++ +++++||++++ ++++|+|+.+|
T Consensus 118 ~~l~~~e~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~pVvd~~-~~lvGivt~~d 193 (286)
T 2oux_A 118 SLLSSEEAGEIKELLHYEDETAGAIMTT--EFVSIVANQTVR-SAMYVLKNQADMAETIYYVYVVDQE-NHLVGVISLRD 193 (286)
T ss_dssp HTSCHHHHHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHH-HHHHHHHHHCSSCSCCSEEEEECTT-CBEEEEEEHHH
T ss_pred HcCCHHHHHHHHHHhcCChHHHHHhCCC--CceEECCCCcHH-HHHHHHHHcccCccceeEEEEEcCC-CeEEEEEEHHH
Confidence 3477888999999999999999999986 788999999998 999999987 89999999864 89999999999
Q ss_pred hcccCCccccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 260 LLTIHPEDEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 260 ll~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
++.... ..++.++|.+++.+|+++++ +.++++.|+++
T Consensus 194 ll~~~~--~~~v~~im~~~~~~v~~~~~-----l~ea~~~m~~~ 230 (286)
T 2oux_A 194 LIVNDD--DTLIADILNERVISVHVGDD-----QEDVAQTIRDY 230 (286)
T ss_dssp HTTSCT--TSBHHHHSBSCCCCEETTSB-----HHHHHHHHHHH
T ss_pred HHcCCC--CCcHHHHcCCCCeeecCCCC-----HHHHHHHHHHc
Confidence 987543 45899998889999999999 99999999764
No 28
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.27 E-value=2.1e-12 Score=106.68 Aligned_cols=101 Identities=8% Similarity=0.082 Sum_probs=87.2
Q ss_pred hhhhcccccccccccccc-ceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCC-----cccc
Q 022005 196 AGALELTEKTASDAMTPI-AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP-----EDEV 269 (304)
Q Consensus 196 ~~~l~l~~~~V~diMtpr-~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~-----~~~~ 269 (304)
+....+..++|+|+|+|+ .+++++++++++. ++++.+.+++++++||++++ |+++|+|+.+|+++... ....
T Consensus 16 ~~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~ 93 (165)
T 3fhm_A 16 NLYFQGMATFVKDLLDRKGRDVVTVGPDVSIG-EAAGTLHAHKIGAVVVTDAD-GVVLGIFTERDLVKAVAGQGAASLQQ 93 (165)
T ss_dssp CCCCSSSSCBHHHHHHHHCSCCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHGGGGGTS
T ss_pred hhhHhhhhcCHHHHhccCCCCCeEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEHHHHHHHHHhcCCccccC
Confidence 455678889999999985 5788999999998 99999999999999999864 89999999999987432 1246
Q ss_pred CcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 270 PVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 270 ~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
++.++|.+++.+++++++ +.++++.|.++
T Consensus 94 ~v~~~m~~~~~~v~~~~~-----l~~a~~~m~~~ 122 (165)
T 3fhm_A 94 SVSVAMTKNVVRCQHNST-----TDQLMEIMTGG 122 (165)
T ss_dssp BGGGTSBSSCCCBCTTCB-----HHHHHHHHHHH
T ss_pred CHHHHhcCCCeEECCCCc-----HHHHHHHHHHc
Confidence 899998889999999999 99999999753
No 29
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.26 E-value=4.4e-12 Score=100.90 Aligned_cols=91 Identities=11% Similarity=0.141 Sum_probs=79.7
Q ss_pred ccccccccc-ceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcc-cCC----ccccCcccccccc
Q 022005 205 TASDAMTPI-AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLT-IHP----EDEVPVKSVTIRR 278 (304)
Q Consensus 205 ~V~diMtpr-~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~-~~~----~~~~~v~~~~~~~ 278 (304)
+|+|+|+|+ .++.++++++++. ++++.+.+++++++||++ + |+++|+++.+|+++ ... ....++.++|.++
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~ 83 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVF-NAMQKMAADNIGALLVMK-D-EKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQ 83 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCS
T ss_pred eHHHHHhcCCCCcEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCC
Confidence 899999976 7889999999998 999999999999999997 3 89999999999985 321 1356899998889
Q ss_pred cceecCCCCCchhHHHHHHHHHhhc
Q 022005 279 IPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 279 ~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
+.+++++++ +.++++.|.++
T Consensus 84 ~~~v~~~~~-----l~~~~~~m~~~ 103 (135)
T 2rc3_A 84 VAYVDLNNT-----NEDCMALITEM 103 (135)
T ss_dssp CCCBCTTCB-----HHHHHHHHHHH
T ss_pred CeEECCCCc-----HHHHHHHHHHh
Confidence 999999999 99999999754
No 30
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.25 E-value=3.8e-12 Score=105.94 Aligned_cols=94 Identities=19% Similarity=0.221 Sum_probs=81.2
Q ss_pred cccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC------------------
Q 022005 203 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH------------------ 264 (304)
Q Consensus 203 ~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~------------------ 264 (304)
..+|+|+|+|+.+++++++++++. ++++.+.+++++++||++++ ++++|+|+.+|+++..
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 80 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVD-DALELLVEKKVTGLPVIDDN-WTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDS 80 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHTCC-------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CeEEEEEEHHHHHhhhhhccccCCcccccccccc
Confidence 468999999988899999999998 99999999999999999864 8999999999998531
Q ss_pred -------------CccccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 265 -------------PEDEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 265 -------------~~~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
.....+++++|.+++.+++++++ +.++++.|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~-----l~~a~~~m~~~ 127 (180)
T 3sl7_A 81 TWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTN-----LEDAARLLLET 127 (180)
T ss_dssp CCCSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSB-----HHHHHHHHTTS
T ss_pred hhhhhHHHHHHHhccccccHHHHhCCCceEeCCCCc-----HHHHHHHHHHc
Confidence 11245789998888899999999 99999999763
No 31
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.25 E-value=7.8e-12 Score=99.05 Aligned_cols=93 Identities=15% Similarity=0.215 Sum_probs=80.6
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCC---ccccCccccccc
Q 022005 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP---EDEVPVKSVTIR 277 (304)
Q Consensus 201 l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~---~~~~~v~~~~~~ 277 (304)
+++.+|+|+|+| ++.++++++++. ++++.+.+++++++||++ + |+++|+++.+|+++... ....++.++|.+
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~ 75 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLN-DIAKVMTEKNIGSVIVVD-G-NKPVGIITERDIVKAIGKGKSLETKAEEFMTA 75 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEE
T ss_pred CCcccHHHhccC--CCEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEcHHHHHHHHhcCCCcccCHHHHcCC
Confidence 467899999987 678899999998 999999999999999998 4 89999999999986432 124689999878
Q ss_pred ccceecCCCCCchhHHHHHHHHHhhc
Q 022005 278 RIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 278 ~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
++.+++++++ +.++++.|.++
T Consensus 76 ~~~~v~~~~~-----l~~~~~~~~~~ 96 (133)
T 2ef7_A 76 SLITIREDSP-----ITGALALMRQF 96 (133)
T ss_dssp CCCCEETTSB-----HHHHHHHHHHH
T ss_pred CCEEECCCCC-----HHHHHHHHHHc
Confidence 9999999999 99999999763
No 32
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.25 E-value=6.8e-12 Score=99.01 Aligned_cols=92 Identities=13% Similarity=0.132 Sum_probs=80.4
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCccc---cCcccccccc
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDE---VPVKSVTIRR 278 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~---~~v~~~~~~~ 278 (304)
.+.+|+|+|++ ++.++++++++. ++++.+.+++++++||+++ |+++|+++.+|+++...++. .++.++|.++
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 77 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTA-DAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLET 77 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCBC
T ss_pred cceEHHHhhcC--CcceECCCCCHH-HHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHhhCCcccCcHHHHccCC
Confidence 46799999986 577899999998 9999999999999999985 89999999999988654322 5699998889
Q ss_pred cceecCCCCCchhHHHHHHHHHhhc
Q 022005 279 IPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 279 ~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
+.+++++++ +.++++.|.++
T Consensus 78 ~~~v~~~~~-----l~~~~~~~~~~ 97 (128)
T 3gby_A 78 VRSYRPGEQ-----LFDNLISVAAA 97 (128)
T ss_dssp CCCBCTTSB-----GGGSHHHHHHC
T ss_pred CcEECCCCC-----HHHHHHHHHhC
Confidence 999999999 99999999764
No 33
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.22 E-value=1.5e-11 Score=98.51 Aligned_cols=90 Identities=7% Similarity=0.082 Sum_probs=78.4
Q ss_pred ccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCC--cEEEEEEechhcccCC---ccccCcccccccc
Q 022005 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPT--NIIGLILVKNLLTIHP---EDEVPVKSVTIRR 278 (304)
Q Consensus 204 ~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~--~ivGiv~~kDll~~~~---~~~~~v~~~~~~~ 278 (304)
.+|+|+|++ ++.++++++++. ++++.+.+++++++||++++ + +++|+++.+|+++... ....++.++|.++
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 80 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIR-EVATELAKNRVGLAVLTARD-NPKRPVAVVSERDILRAVAQRLDLDGPAMPIANSP 80 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHH-HHHHHHHHHTCSEEEEEETT-EEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBCC
T ss_pred eEHHHHhcC--CCeEeCCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCCC
Confidence 589999986 788999999998 99999999999999999864 5 8999999999987532 1246899998889
Q ss_pred cceecCCCCCchhHHHHHHHHHhhc
Q 022005 279 IPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 279 ~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
+.+++++ + +.++++.|.++
T Consensus 81 ~~~v~~~-~-----l~~a~~~m~~~ 99 (141)
T 2rih_A 81 ITVLDTD-P-----VHVAAEKMRRH 99 (141)
T ss_dssp CEEETTS-B-----HHHHHHHHHHH
T ss_pred CeEEcCC-C-----HHHHHHHHHHc
Confidence 9999999 9 99999999764
No 34
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.21 E-value=4.8e-12 Score=126.39 Aligned_cols=95 Identities=14% Similarity=0.013 Sum_probs=81.9
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHH-hcCCceeeeeeCCCCcEEEEEEechhcccCCcc-------------
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLIL-EKGHSRVPVYYEEPTNIIGLILVKNLLTIHPED------------- 267 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~-~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~------------- 267 (304)
++++|+|+|+||++++++++++|++ |+.+.+. +++|+++||+|+ +|+++|+|+.+|+++...+.
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~-e~~~~~~~~~~~~~~PVvd~-~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~ 528 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQ-HIKGILEKFPNRLVFPVIDA-NGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRT 528 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHH-HHHHHHHHSTTCCEECBBCT-TCBBCCEESHHHHTTTTTTC-------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHH-HHHHHHHhcCCcceEEEEec-CCeEEEEEEHHHHHHHHHHHhhhcccccccccc
Confidence 6789999999999999999999998 9999999 799999999986 48999999999998753211
Q ss_pred --------------------------------------ccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 268 --------------------------------------EVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 268 --------------------------------------~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
..+++++|.+++.+|+++++ +.++++.|+++
T Consensus 529 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~-----l~ea~~~M~~~ 597 (632)
T 3org_A 529 LVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSL-----VRQLHFLFVML 597 (632)
T ss_dssp ------------------------------------------CCSCCCCCCEEETTCB-----HHHHHHHHHHT
T ss_pred eeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCc-----HHHHHHHHHhc
Confidence 00277889999999999999 99999999875
No 35
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.21 E-value=1.4e-11 Score=98.00 Aligned_cols=94 Identities=16% Similarity=0.270 Sum_probs=81.2
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechh-cccCCc---cccCcccccc
Q 022005 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNL-LTIHPE---DEVPVKSVTI 276 (304)
Q Consensus 201 l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDl-l~~~~~---~~~~v~~~~~ 276 (304)
+.+.+|+|+|++ ++.++++++++. ++.+.+.+++++++||++++ ++++|+++.+|+ ++.... ...++.++|.
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 80 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVV-EAFEKMLKYKISSLPVIDDE-NKVIGIVTTTDIGYNLIRDKYTLETTIGDVMT 80 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHH-HHHHHHHHHTCCEEEEECTT-CBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSC
T ss_pred cccCCHHHhhcC--CceEECCCCcHH-HHHHHHHHCCCcEEEEECCC-CeEEEEEEHHHHHHHHHhhcccCCcCHHHHhC
Confidence 567899999986 677899999998 99999999999999999864 899999999999 764322 2457899988
Q ss_pred cccceecCCCCCchhHHHHHHHHHhhc
Q 022005 277 RRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 277 ~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
+++.+++++++ +.++++.|.++
T Consensus 81 ~~~~~v~~~~~-----l~~~~~~~~~~ 102 (138)
T 2p9m_A 81 KDVITIHEDAS-----ILEAIKKMDIS 102 (138)
T ss_dssp SSCCCEETTSB-----HHHHHHHHTCC
T ss_pred CCcEEECCCCC-----HHHHHHHHHhc
Confidence 88999999999 99999999753
No 36
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.20 E-value=2.1e-11 Score=100.04 Aligned_cols=93 Identities=15% Similarity=0.144 Sum_probs=79.6
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC----CccccCcccccc
Q 022005 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH----PEDEVPVKSVTI 276 (304)
Q Consensus 201 l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~----~~~~~~v~~~~~ 276 (304)
+.+++|+|+|++ .+++++++++. ++++.+.+++++++||++++ |+++|+|+.+|+++.. .....++.++|.
T Consensus 14 l~~~~v~~im~~---~~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 88 (159)
T 3fv6_A 14 LKKLQVKDFQSI---PVVIHENVSVY-DAICTMFLEDVGTLFVVDRD-AVLVGVLSRKDLLRASIGQQELTSVPVHIIMT 88 (159)
T ss_dssp HTTCBGGGSCBC---CCEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSE
T ss_pred HhhCCHHHHcCC---CEEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHhhccCcccCcCHHHHHc
Confidence 467899999985 34899999998 99999999999999999864 8999999999998743 123468999987
Q ss_pred c--ccceecCCCCCchhHHHHHHHHHhhc
Q 022005 277 R--RIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 277 ~--~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
+ ++.+++++++ +.++++.|.++
T Consensus 89 ~~~~~~~v~~~~~-----l~~a~~~m~~~ 112 (159)
T 3fv6_A 89 RMPNITVCRREDY-----VMDIAKHLIEK 112 (159)
T ss_dssp ETTSCCCBCTTSB-----HHHHHHHHHHH
T ss_pred CCCCcEEECCCCC-----HHHHHHHHHHc
Confidence 7 8899999999 99999999753
No 37
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.19 E-value=3.3e-11 Score=101.32 Aligned_cols=91 Identities=16% Similarity=0.235 Sum_probs=79.7
Q ss_pred ccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCC-----ccccCcccccccc
Q 022005 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP-----EDEVPVKSVTIRR 278 (304)
Q Consensus 204 ~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~-----~~~~~v~~~~~~~ 278 (304)
.+|+|+|++ +++++++++++. ++++.+.+++++++||++++ |+++|+++.+|+++... ....++.++|.++
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~-ea~~~~~~~~~~~~pVvd~~-g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~ 84 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVF-DAVKIMNENHLYGLVVKDDN-GNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKP 84 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSS
T ss_pred cCHHHhcCC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCC
Confidence 689999985 788999999998 99999999999999999865 89999999999987532 2346899998788
Q ss_pred cceecCCCCCchhHHHHHHHHHhhc
Q 022005 279 IPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 279 ~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
+.+++++++ +.++++.|.++
T Consensus 85 ~~~v~~~~~-----l~~a~~~m~~~ 104 (184)
T 1pvm_A 85 IPKVKSDYD-----VKDVAAYLSEN 104 (184)
T ss_dssp CCEEETTCB-----HHHHHHHHHHH
T ss_pred CcEECCCCC-----HHHHHHHHHHc
Confidence 999999999 99999999763
No 38
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.18 E-value=1.2e-11 Score=109.93 Aligned_cols=124 Identities=13% Similarity=0.178 Sum_probs=95.0
Q ss_pred cccHHHHHHHHHhhcccccCCCCCChhHHHHHhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeee
Q 022005 164 LFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPV 243 (304)
Q Consensus 164 ~~s~eEl~~lv~~~~~e~~~~g~l~~~e~~~i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV 243 (304)
.+|.+|+...+.. ..+.+.++.. ...+.+...+.+|+|+|++ +++++++++++. ++++.+.+++++++||
T Consensus 51 ivt~~di~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~V 120 (280)
T 3kh5_A 51 IITSMDIVDFMGG----GSKYNLIREK---HERNFLAAINEPVREIMEE--NVITLKENADID-EAIETFLTKNVGGAPI 120 (280)
T ss_dssp EEEHHHHHHHTTT----SGGGHHHHTT---STTCHHHHTTSBGGGTSBC--SCCCEETTCBHH-HHHHHHHHTTCSEEEE
T ss_pred EEEHHHHHHHhcc----cchhhhhhhc---cccchhHHhhhhHHHhcCC--CCEEECCCCCHH-HHHHHHHhCCCCEEEE
Confidence 4688898887642 1111111111 1233444457899999996 788999999998 9999999999999999
Q ss_pred eeCCCCcEEEEEEechhcccCCc---cccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 244 YYEEPTNIIGLILVKNLLTIHPE---DEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 244 ~~~~~~~ivGiv~~kDll~~~~~---~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
++++ |+++|+++.+|+++...+ ...++.++|.+++.+++++++ +.++++.|+++
T Consensus 121 vd~~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~-----l~~~~~~~~~~ 177 (280)
T 3kh5_A 121 VNDE-NQLISLITERDVIRALLDKIDENEVIDDYITRDVIVATPGER-----LKDVARTMVRN 177 (280)
T ss_dssp ECTT-CBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBCSCCCBCTTCB-----HHHHHHHHHHH
T ss_pred EcCC-CEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCCCCeEECCCCc-----HHHHHHHHHHc
Confidence 9865 899999999999875322 234789998889999999999 99999999764
No 39
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.16 E-value=2.3e-11 Score=99.97 Aligned_cols=93 Identities=17% Similarity=0.219 Sum_probs=79.7
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCC------------cccc
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP------------EDEV 269 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~------------~~~~ 269 (304)
...+|+|+|++ +++++++++|+. ++++.+.+++++++||++++ ++++|+|+.+|+++... ....
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~ 78 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLN-DAKHLMEALDIRHVPIVDAN-KKLLGIVSQRDLLAAQESSLQRSAQGDSLAFET 78 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHHHCC---------CCC
T ss_pred CcCcHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHHhhcccccccchhccc
Confidence 45789999986 678899999998 99999999999999999864 89999999999986421 1245
Q ss_pred CcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 270 PVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 270 ~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
++.++|.+++.+++++++ +.++++.|.++
T Consensus 79 ~v~~im~~~~~~v~~~~~-----l~~a~~~m~~~ 107 (160)
T 2o16_A 79 PLFEVMHTDVTSVAPQAG-----LKESAIYMQKH 107 (160)
T ss_dssp BHHHHSCSCEEEBCTTSB-----HHHHHHHHHHT
T ss_pred CHHHHhcCCCeEECCCCC-----HHHHHHHHHHh
Confidence 789998888999999999 99999999753
No 40
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.16 E-value=2e-11 Score=95.40 Aligned_cols=90 Identities=20% Similarity=0.219 Sum_probs=77.6
Q ss_pred ccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCc----cccCccccccccc
Q 022005 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE----DEVPVKSVTIRRI 279 (304)
Q Consensus 204 ~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~----~~~~v~~~~~~~~ 279 (304)
++|+|+|++ ++.++++++++. ++++.+.+++++++||++ + |+++|+++.+|+++...+ ...++.++|.+++
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~ 75 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLE-DVLRNYVENAKGSSVVVK-E-GVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDL 75 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHH-HHHHHHHHHCCCEEEEEE-T-TEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGG
T ss_pred CCHHHhcCC--CceEECCCCcHH-HHHHHHHHcCCCEEEEEe-C-CeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCC
Confidence 378999986 778899999998 999999999999999998 4 899999999999864321 2467899987899
Q ss_pred ceecCCCCCchhHHHHHHHHHhhc
Q 022005 280 PRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 280 ~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
.+++++++ +.++++.|.++
T Consensus 76 ~~v~~~~~-----l~~~~~~~~~~ 94 (125)
T 1pbj_A 76 VTISPRAT-----IKEAAEKMVKN 94 (125)
T ss_dssp GEECTTSC-----HHHHHHHHHHH
T ss_pred eEECCCCC-----HHHHHHHHHhc
Confidence 99999999 99999999753
No 41
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.16 E-value=2.6e-11 Score=98.98 Aligned_cols=92 Identities=13% Similarity=0.170 Sum_probs=79.9
Q ss_pred cccccccccc----ceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCc-----cccCcccc
Q 022005 204 KTASDAMTPI----AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-----DEVPVKSV 274 (304)
Q Consensus 204 ~~V~diMtpr----~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~-----~~~~v~~~ 274 (304)
.+|+|+|+|+ .++.++++++++. ++++.+.+++++++||.+ .|+++|+++.+|+++.... ...++.++
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~V~~--~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~ 83 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVY-DAIKLMAEKGIGALLVVD--GDDIAGIVTERDYARKVVLQERSSKATRVEEI 83 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHH-HHHHHHHHHTCSEEEEES--SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHH
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHH-HHHHHHHHcCCCEEEEee--CCEEEEEEEHHHHHHHHHhccCCccccCHHHH
Confidence 4799999987 6788999999998 999999999999999954 4899999999999875321 24689999
Q ss_pred cccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 275 TIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 275 ~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
|.+++.+++++++ +.++++.|.++
T Consensus 84 m~~~~~~v~~~~~-----l~~~~~~m~~~ 107 (157)
T 4fry_A 84 MTAKVRYVEPSQS-----TDECMALMTEH 107 (157)
T ss_dssp SBSSCCCBCTTSB-----HHHHHHHHHHH
T ss_pred cCCCCcEECCCCc-----HHHHHHHHHHc
Confidence 8888999999999 99999999763
No 42
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.16 E-value=2.2e-11 Score=101.83 Aligned_cols=96 Identities=15% Similarity=0.208 Sum_probs=80.6
Q ss_pred ccccccccccccce--EEEE--eCCCCccHHHHHHHHhcCCceeeeee-CCCCcEEEEEEechhcccCC-----------
Q 022005 202 TEKTASDAMTPIAE--TFAI--DINAKLDKELMNLILEKGHSRVPVYY-EEPTNIIGLILVKNLLTIHP----------- 265 (304)
Q Consensus 202 ~~~~V~diMtpr~~--v~~l--~~~~t~~~e~~~~~~~~~~sr~PV~~-~~~~~ivGiv~~kDll~~~~----------- 265 (304)
.+.+|+|+|+|..+ ++++ ++++++. ++++.+.+++++++||++ ++.|+++|+|+.+|+++...
T Consensus 9 ~~~~v~dim~~~~~~~~~~v~~~~~~~~~-~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~ 87 (185)
T 2j9l_A 9 HKTLAMDVMKPRRNDPLLTVLTQDSMTVE-DVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVS 87 (185)
T ss_dssp CCCBHHHHSBSCTTSCCCCCEESSCEEHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCT
T ss_pred ccCcHHHHhcccccCceEEEecCCCccHH-HHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCccc
Confidence 56799999998643 6778 9999998 999999999999999993 23589999999999976421
Q ss_pred -----------------ccccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 266 -----------------EDEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 266 -----------------~~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
....++.++|.+++.+++++++ +.++++.|.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~-----l~~a~~~m~~~ 137 (185)
T 2j9l_A 88 TSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTP-----MEIVVDIFRKL 137 (185)
T ss_dssp TCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSB-----HHHHHHHHHHH
T ss_pred cceeecccCCcccccccccCccHHHhhCcCCeEeCCCCC-----HHHHHHHHHhC
Confidence 1245789998789999999999 99999999753
No 43
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.15 E-value=1.9e-11 Score=96.75 Aligned_cols=93 Identities=12% Similarity=0.167 Sum_probs=78.5
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhc-ccCCc----cccCcccccc
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLL-TIHPE----DEVPVKSVTI 276 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll-~~~~~----~~~~v~~~~~ 276 (304)
.-.+|+|+|++ ++.++++++++. ++++.+.+++++++||++++ ++++|+++.+|++ +.... ...++.++|.
T Consensus 6 ~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~ 81 (133)
T 1y5h_A 6 TMTTARDIMNA--GVTCVGEHETLT-AAAQYMREHDIGALPICGDD-DRLHGMLTDRDIVIKGLAAGLDPNTATAGELAR 81 (133)
T ss_dssp --CCHHHHSEE--TCCCEETTSBHH-HHHHHHHHHTCSEEEEECGG-GBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHT
T ss_pred hhcCHHHHhcC--CceEeCCCCCHH-HHHHHHHHhCCCeEEEECCC-CeEEEEEeHHHHHHHHHhcCCCccccCHHHHhc
Confidence 44689999986 677899999998 99999999999999999764 8999999999998 33321 2467899987
Q ss_pred cccceecCCCCCchhHHHHHHHHHhhc
Q 022005 277 RRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 277 ~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
+++.+++++++ +.++++.|.++
T Consensus 82 ~~~~~v~~~~~-----l~~~~~~m~~~ 103 (133)
T 1y5h_A 82 DSIYYVDANAS-----IQEMLNVMEEH 103 (133)
T ss_dssp TCCCCEETTCC-----HHHHHHHHHHH
T ss_pred CCCEEECCCCC-----HHHHHHHHHHc
Confidence 89999999999 99999999754
No 44
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.12 E-value=2.8e-11 Score=99.07 Aligned_cols=100 Identities=11% Similarity=0.191 Sum_probs=79.7
Q ss_pred hhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeC-CCCcEEEEEEechhcccCCc--------
Q 022005 196 AGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYE-EPTNIIGLILVKNLLTIHPE-------- 266 (304)
Q Consensus 196 ~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~-~~~~ivGiv~~kDll~~~~~-------- 266 (304)
.+.+.+.+.+|+|+|++ +++++++++++. ++++.+.+++++++||+++ +.|+++|+++.+|+++....
T Consensus 5 ~~~~~~~~~~v~dim~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~ 81 (164)
T 2pfi_A 5 GRNIGSHHVRVEHFMNH--SITTLAKDTPLE-EVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPG 81 (164)
T ss_dssp -----CCSCBHHHHCBC--CCCCEETTCBHH-HHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------C
T ss_pred cccccccCCCHHHHcCC--CCeEECCCCcHH-HHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCc
Confidence 44556788999999987 778899999998 9999999999999999986 24899999999999864311
Q ss_pred cccCcccccccc------cceecCCCCCchhHHHHHHHHHhhc
Q 022005 267 DEVPVKSVTIRR------IPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 267 ~~~~v~~~~~~~------~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
...++.++|.++ +.+++++++ +.++++.|.++
T Consensus 82 ~~~~v~~~m~~~~~~~~~~~~v~~~~~-----l~~~~~~m~~~ 119 (164)
T 2pfi_A 82 HQQCLQDILARGCPTEPVTLTLFSETT-----LHQAQNLFKLL 119 (164)
T ss_dssp CCCBHHHHHHTTCCCBCCCCCEETTCB-----HHHHHHHHHHT
T ss_pred ccchhhhhhcccccccCCceEECCCCc-----HHHHHHHHHHh
Confidence 124677886555 688999999 99999999764
No 45
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.12 E-value=3.7e-11 Score=108.14 Aligned_cols=120 Identities=15% Similarity=0.230 Sum_probs=94.9
Q ss_pred cccHHHHHHHHHhhcccccCCCCCChhHHHHHhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeee
Q 022005 164 LFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPV 243 (304)
Q Consensus 164 ~~s~eEl~~lv~~~~~e~~~~g~l~~~e~~~i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV 243 (304)
.+|.+||...+.. ..+ . .+...+.+...+.+|+++|++ +++++++++++. ++++.+.+++++++||
T Consensus 64 ivT~~Di~~~~~~----~~~---~----~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpV 129 (296)
T 3ddj_A 64 LLTTRDLLSTVES----YCK---D----SCSQGDLYHISTTPIIDYMTP--NPVTVYNTSDEF-TAINIMVTRNFGSLPV 129 (296)
T ss_dssp EEEHHHHHGGGTT----CC----------CCHHHHHHHHTSBGGGTSEE--SCCCEETTSCHH-HHHHHHHHHTCSEEEE
T ss_pred EEeHHHHHHHhcc----ccc---c----cccchhhHHHhcccHHHhccC--CCEEEcCCCCHH-HHHHHHHHcCCCEEEE
Confidence 4677777766531 100 0 233455556678899999997 677999999998 9999999999999999
Q ss_pred eeCCCCcEEEEEEechhcccCCc--cccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 244 YYEEPTNIIGLILVKNLLTIHPE--DEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 244 ~~~~~~~ivGiv~~kDll~~~~~--~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
++++ |+++|+++.+|+++.... ...++.++|.+++.+++++++ +.++++.|+++
T Consensus 130 vd~~-~~lvGivt~~dl~~~~~~~~~~~~v~~~m~~~~~~v~~~~~-----l~~~~~~m~~~ 185 (296)
T 3ddj_A 130 VDIN-DKPVGIVTEREFLLLYKDLDEIFPVKVFMSTKVQTIYKEVR-----LDQAVKLMLRR 185 (296)
T ss_dssp ECTT-SCEEEEEEHHHHGGGGGGSCCCCBHHHHSBCSCCCEETTSB-----HHHHHHHHHHH
T ss_pred EcCC-CcEEEEEeHHHHHHhhhcccccccHHHhhcCCCeEECCCCC-----HHHHHHHHHHc
Confidence 9864 899999999999875432 245889998889999999999 99999999763
No 46
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.11 E-value=8.6e-11 Score=113.93 Aligned_cols=122 Identities=11% Similarity=0.200 Sum_probs=99.7
Q ss_pred cccHHHHHHHHHhhcccccCCCCCC-----hhHHHHHhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhcCC
Q 022005 164 LFRRAELKTLVNLHGNEAGKGGELT-----HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGH 238 (304)
Q Consensus 164 ~~s~eEl~~lv~~~~~e~~~~g~l~-----~~e~~~i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~ 238 (304)
.+|++|+...+... +..|.+. ++++++++++++ ++|+|++ +++++++++++. ++++.+.++++
T Consensus 54 ~vt~~eLa~av~~~----Gg~G~i~~~~~~e~~~~~i~~v~~-----~~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~ 121 (491)
T 1zfj_A 54 TVTGSKMAIAIARA----GGLGVIHKNMSITEQAEEVRKVKR-----SENGVII--DPFFLTPEHKVS-EAEELMQRYRI 121 (491)
T ss_dssp TTCSHHHHHHHHHT----TCEEEECCSSCHHHHHHHHHHHHH-----HTTTTSS--SCCCBCSSSBHH-HHHHHHHHTTC
T ss_pred hccHHHHHHHHHHc----CCceEEeCCCCHHHHHHHHHHHhh-----HHhcCcC--CCeEECCCCcHH-HHHHHHHHcCC
Confidence 46788999888732 2224454 677888888765 4789997 788899999998 99999999999
Q ss_pred ceeeeeeC-CCCcEEEEEEechhcccCCccccCccccccc-ccceecCCCCCchhHHHHHHHHHhhc
Q 022005 239 SRVPVYYE-EPTNIIGLILVKNLLTIHPEDEVPVKSVTIR-RIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 239 sr~PV~~~-~~~~ivGiv~~kDll~~~~~~~~~v~~~~~~-~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
+++||+++ +.++++|+|+.+|++... +.+.+++++|.+ ++.+++++++ +.++++.|+++
T Consensus 122 ~~~pVvd~~~~~~lvGivt~~Dl~~~~-~~~~~v~~im~~~~~~~v~~~~~-----l~~a~~~m~~~ 182 (491)
T 1zfj_A 122 SGVPIVETLANRKLVGIITNRDMRFIS-DYNAPISEHMTSEHLVTAAVGTD-----LETAERILHEH 182 (491)
T ss_dssp SEEEEESCTTTCBEEEEEEHHHHHHCS-CSSSBTTTSCCCSCCCCEETTCC-----HHHHHHHHHHT
T ss_pred CEEEEEEeCCCCEEEEEEEHHHHhhhc-cCCCcHHHHcCCCCCEEECCCCC-----HHHHHHHHHHc
Confidence 99999982 348999999999998653 345689999776 8999999999 99999999764
No 47
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.10 E-value=2.2e-11 Score=118.20 Aligned_cols=121 Identities=13% Similarity=0.189 Sum_probs=92.2
Q ss_pred cccHHHHHHHHHhhcccccCCCCC-----ChhHHHHHhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhcCC
Q 022005 164 LFRRAELKTLVNLHGNEAGKGGEL-----THDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGH 238 (304)
Q Consensus 164 ~~s~eEl~~lv~~~~~e~~~~g~l-----~~~e~~~i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~ 238 (304)
.+|++|+...+...+ .-|.+ .++++++++++ ++++++|++ +++++++++|+. ++++.+.+++|
T Consensus 53 tVTe~~ma~a~a~~G----GiGvI~~n~s~e~qa~~V~~V-----k~~~~~m~~--d~v~v~~~~tv~-ea~~~m~~~~~ 120 (496)
T 4fxs_A 53 TVTEARLAIALAQEG----GIGFIHKNMSIEQQAAQVHQV-----KIFEAGVVT--HPVTVRPEQTIA-DVMELTHYHGF 120 (496)
T ss_dssp TTCSHHHHHHHHHHT----CEEEECSSSCHHHHHHHHHHH-----HHCCC--CB--CCCCBCSSSBHH-HHHHHHTSSCC
T ss_pred hhhHHHHHHHHHHcC----CcceecCCCCHHHHHHHHHhc-----ccccccccc--CceEECCCCCHH-HHHHHHHHcCC
Confidence 468899988886322 22445 66788899888 467899984 888999999998 99999999999
Q ss_pred ceeeeeeCCCCcEEEEEEechhcccCCccccCcccccc-c-ccceecCCCCCchhHHHHHHHHHhhc
Q 022005 239 SRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTI-R-RIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 239 sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~~~~-~-~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
+++||++++ |+++|+|+.+|+.... +...+++++|. + ++.+++++++ +.++++.|+++
T Consensus 121 s~~PVvd~~-~~lvGiVt~rDL~~~~-~~~~~v~diM~p~~~~vtv~~~~~-----l~ea~~~m~~~ 180 (496)
T 4fxs_A 121 AGFPVVTEN-NELVGIITGRDVRFVT-DLTKSVAAVMTPKERLATVKEGAT-----GAEVQEKMHKA 180 (496)
T ss_dssp CEEEEECSS-SBEEEEEEHHHHTTCC-CTTSBGGGTSEEGGGCCEEECC---------CGGGTCC--
T ss_pred cEEEEEccC-CEEEEEEEHHHHhhcc-cCCCcHHHHhcCCCCCEEECCCCC-----HHHHHHHHHHc
Confidence 999999865 8999999999997432 34568999965 3 6999999999 99999988764
No 48
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.09 E-value=1e-10 Score=95.63 Aligned_cols=93 Identities=17% Similarity=0.254 Sum_probs=79.1
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCce-eeeeeCCCCcEEEEEEechhcccC--------------
Q 022005 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSR-VPVYYEEPTNIIGLILVKNLLTIH-------------- 264 (304)
Q Consensus 200 ~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr-~PV~~~~~~~ivGiv~~kDll~~~-------------- 264 (304)
...+.+|+|+|++ ++.++++++|+. ++++.+.++++++ +||++++ +++|+|+.+|+++..
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~-ea~~~m~~~~~~~~~~Vvd~~--~~vGivt~~dl~~~~~~~~~~~~~~~~~~ 86 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIE-EIVDRILEDPVTRTVYVARDN--KLVGMIPVMHLLKVSGFHFFGFIPKEELI 86 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHH-HHHHHHHHSTTCCEEEEEETT--EEEEEEEHHHHHHHHHHHHHCCCC-----
T ss_pred hhccccHhhcccC--CCceECCCCCHH-HHHHHHHhCCCCccEEEEECC--EEEEEEEHHHHHHHHhhhHHhhhccHHHH
Confidence 3466789999986 788999999998 9999999999999 9999864 999999999998641
Q ss_pred -----CccccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 265 -----PEDEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 265 -----~~~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
.....++.++|.+ +.+++++++ +.++++.|.++
T Consensus 87 ~~~~~~~~~~~v~~im~~-~~~v~~~~~-----l~~a~~~m~~~ 124 (157)
T 1o50_A 87 RSSMKRLIAKNASEIMLD-PVYVHMDTP-----LEEALKLMIDN 124 (157)
T ss_dssp --CCCCCSSCBHHHHCBC-CCCBCTTSB-----HHHHHHHHHHH
T ss_pred HHHHHHHcCCcHHHHcCC-CeEECCCCC-----HHHHHHHHHHC
Confidence 1234578899766 889999999 99999999753
No 49
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.07 E-value=1.2e-10 Score=113.79 Aligned_cols=95 Identities=16% Similarity=0.163 Sum_probs=82.4
Q ss_pred cccccccccccccceEEEEeCC-CCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC----CccccCccccc
Q 022005 201 LTEKTASDAMTPIAETFAIDIN-AKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH----PEDEVPVKSVT 275 (304)
Q Consensus 201 l~~~~V~diMtpr~~v~~l~~~-~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~----~~~~~~v~~~~ 275 (304)
+.+.+|+|+|++ ++++++++ +|+. ++++.|.+++++++||++++.++++|+|+.+|+++.. .....++.++|
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~-ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im 457 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVG-EAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKAL 457 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHH-HHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGE
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHH-HHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHh
Confidence 567899999985 78899999 9998 9999999999999999983348999999999998643 12346899998
Q ss_pred ccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 276 IRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 276 ~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
.+++.+++++++ +.++++.|.++
T Consensus 458 ~~~~~~v~~~~~-----l~~a~~~m~~~ 480 (527)
T 3pc3_A 458 NKRVIRLNESEI-----LGKLARVLEVD 480 (527)
T ss_dssp ETTCCEEETTSB-----HHHHHHHHTTC
T ss_pred cCCCeEECCCCc-----HHHHHHHHhhC
Confidence 899999999999 99999999754
No 50
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.05 E-value=1.7e-10 Score=112.28 Aligned_cols=122 Identities=11% Similarity=0.196 Sum_probs=94.7
Q ss_pred cccHHHHHHHHHhhcccccCCCCCC-----hhHHHHHhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhcCC
Q 022005 164 LFRRAELKTLVNLHGNEAGKGGELT-----HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGH 238 (304)
Q Consensus 164 ~~s~eEl~~lv~~~~~e~~~~g~l~-----~~e~~~i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~ 238 (304)
.+|++++...+...+ .-|.+. +++.++++++. +.+++|++ +++++++++|+. ++++.+.+++|
T Consensus 77 tvTe~~lAia~a~~G----giGvIh~~~~~~~q~~~V~~V~-----~~~~~m~~--d~v~l~~~~tv~-ea~~~m~~~~~ 144 (511)
T 3usb_A 77 TVTEADMAIAMARQG----GLGIIHKNMSIEQQAEQVDKVK-----RSESGVIS--DPFFLTPEHQVY-DAEHLMGKYRI 144 (511)
T ss_dssp TTCSHHHHHHHHHHT----CEEEECSSSCHHHHHHHHHHHH-----TSSSCSSS--SCCCBCTTSBHH-HHHHHHHHHCC
T ss_pred hhcHHHHHHHHHhcC----CceeecccCCHHHHHHHHHHhh-----cccccccc--CCEEECCCCCHH-HHHHHHHHcCC
Confidence 467889877775322 123343 34455666665 45677764 788999999998 99999999999
Q ss_pred ceeeeeeCC-CCcEEEEEEechhcccCCccccCccccccc-ccceecCCCCCchhHHHHHHHHHhhc
Q 022005 239 SRVPVYYEE-PTNIIGLILVKNLLTIHPEDEVPVKSVTIR-RIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 239 sr~PV~~~~-~~~ivGiv~~kDll~~~~~~~~~v~~~~~~-~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
+++||++++ .|+++|+|+.+|+... .....+++++|.+ ++.+++++++ +.++++.|+++
T Consensus 145 s~~pVvd~g~~~~lvGiVt~rDl~~~-~~~~~~V~~vM~~~~~vtv~~~~~-----l~eal~~m~~~ 205 (511)
T 3usb_A 145 SGVPVVNNLDERKLVGIITNRDMRFI-QDYSIKISDVMTKEQLITAPVGTT-----LSEAEKILQKY 205 (511)
T ss_dssp SEEEEESCTTTCBEEEEEEHHHHTTC-CCSSSBHHHHCCCCCCCCEETTCC-----HHHHHHHHHHH
T ss_pred cEEEEEecCCCCEEEEEEEehHhhhh-ccCCCcHHHhcccCCCEEECCCCC-----HHHHHHHHHHc
Confidence 999999861 3899999999999763 3345689999876 8999999999 99999999864
No 51
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.04 E-value=1.1e-10 Score=93.27 Aligned_cols=94 Identities=11% Similarity=0.124 Sum_probs=76.8
Q ss_pred cccccccc---cccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCc-----cccCcc
Q 022005 201 LTEKTASD---AMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-----DEVPVK 272 (304)
Q Consensus 201 l~~~~V~d---iMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~-----~~~~v~ 272 (304)
+-+.+++| +|+ .+++++++++++. ++++.+.+++++++||++++ ++++|+++.+|+++.... ...++.
T Consensus 5 ~~~~~v~~~~~~~~--~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~ 80 (144)
T 2nyc_A 5 FLKIPIGDLNIITQ--DNMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSVG 80 (144)
T ss_dssp GGGSBGGGSSCCBC--SSCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHTC----CCSBHH
T ss_pred hhhcchhhcCCCCC--CCceEECCCCcHH-HHHHHHHHcCcceeeEEcCC-CcEEEEEcHHHHHHHhcccccccCCccHH
Confidence 44567888 776 4788999999998 99999999999999999865 899999999999874321 245788
Q ss_pred ccccc------ccceecCCCCCchhHHHHHHHHHhhc
Q 022005 273 SVTIR------RIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 273 ~~~~~------~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
++|.+ ++.+++++++ +.++++.|.++
T Consensus 81 ~~m~~~~~~~~~~~~v~~~~~-----l~~~~~~m~~~ 112 (144)
T 2nyc_A 81 EALMRRSDDFEGVYTCTKNDK-----LSTIMDNIRKA 112 (144)
T ss_dssp HHHHHCC------CEECTTSB-----HHHHHHHHHHH
T ss_pred HHHhcCccccCCCeEECCCCc-----HHHHHHHHHHC
Confidence 88765 6889999999 99999999753
No 52
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.02 E-value=8.2e-10 Score=95.26 Aligned_cols=89 Identities=13% Similarity=0.057 Sum_probs=78.9
Q ss_pred ccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCccccCcccccccccceec
Q 022005 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRYL 283 (304)
Q Consensus 204 ~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~~~~~~~~~v~ 283 (304)
.+++++|++ +++++++++|+. ++++.+.+++++++||++++ ++++|+++.+|+.+... ..+++++|.+++.+++
T Consensus 13 ~~~~~~~~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~l~Givt~~dl~~~~~--~~~v~~im~~~~~~v~ 86 (213)
T 1vr9_A 13 MKVKKWVTQ--DFPMVEESATVR-ECLHRMRQYQTNECIVKDRE-GHFRGVVNKEDLLDLDL--DSSVFNKVSLPDFFVH 86 (213)
T ss_dssp CBGGGGCBS--CSCEEETTCBHH-HHHHHHHHTTSSEEEEECTT-SBEEEEEEGGGGTTSCT--TSBSGGGCBCTTCCEE
T ss_pred cCHHHhhcC--CCeEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CEEEEEEEHHHHHhhcC--CCcHHHHccCCCEEEC
Confidence 468999975 788999999998 99999999999999999864 89999999999987654 4579999888999999
Q ss_pred CCCCCchhHHHHHHHHHhhc
Q 022005 284 ISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 284 ~~~~~~~~~l~~~l~~m~~~ 303 (304)
++++ +.++++.|.++
T Consensus 87 ~~~~-----l~~a~~~m~~~ 101 (213)
T 1vr9_A 87 EEDN-----ITHALLLFLEH 101 (213)
T ss_dssp TTSB-----HHHHHHHHHHC
T ss_pred CCCc-----HHHHHHHHHHh
Confidence 9999 99999999764
No 53
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.00 E-value=4.4e-10 Score=99.71 Aligned_cols=92 Identities=11% Similarity=0.187 Sum_probs=76.4
Q ss_pred cccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCcc-----------------
Q 022005 205 TASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPED----------------- 267 (304)
Q Consensus 205 ~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~----------------- 267 (304)
++++.|.+ .+++++++++|+. ++++.|.+++++++||++++.|+++|+++.+|+++.....
T Consensus 4 ~v~~~i~~-~~~~~v~~~~sl~-~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~~ 81 (280)
T 3kh5_A 4 RVMKIAQN-KKIVTVYPTTTIR-KALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAA 81 (280)
T ss_dssp BGGGTSCC-SCCCCBCTTSBHH-HHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHHH
T ss_pred hHHHHhcC-CCcEEECCCCcHH-HHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhHH
Confidence 45554433 2789999999998 9999999999999999986458999999999998654211
Q ss_pred -ccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 268 -EVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 268 -~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
..+++++|.+++.+++++++ +.++++.|+++
T Consensus 82 ~~~~v~~im~~~~~~v~~~~~-----~~~a~~~~~~~ 113 (280)
T 3kh5_A 82 INEPVREIMEENVITLKENAD-----IDEAIETFLTK 113 (280)
T ss_dssp TTSBGGGTSBCSCCCEETTCB-----HHHHHHHHHHT
T ss_pred hhhhHHHhcCCCCEEECCCCC-----HHHHHHHHHhC
Confidence 34789998889999999999 99999999764
No 54
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.00 E-value=2.8e-10 Score=92.39 Aligned_cols=92 Identities=12% Similarity=0.161 Sum_probs=77.5
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCc-----cccCccccc
Q 022005 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-----DEVPVKSVT 275 (304)
Q Consensus 201 l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~-----~~~~v~~~~ 275 (304)
+++.+|+++ .++.++++++++. ++++.+.+++++.+||++++ |+++|+++.+|+++.... ...++.++|
T Consensus 20 l~~~~v~~~----~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m 93 (152)
T 2uv4_A 20 LEELQIGTY----ANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKAL 93 (152)
T ss_dssp HHHHTCSBC----SSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGG
T ss_pred HHHccCCcc----CCceEeCCCCcHH-HHHHHHHHcCCceEeEECCC-CcEEEEEeHHHHHHHhcchhhhhhcchHHHHH
Confidence 366788888 3678899999998 99999999999999999864 899999999999874321 245788886
Q ss_pred c------cccceecCCCCCchhHHHHHHHHHhhc
Q 022005 276 I------RRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 276 ~------~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
. +++.+++++++ +.++++.|.++
T Consensus 94 ~~~~~~~~~~~~v~~~~~-----l~~a~~~m~~~ 122 (152)
T 2uv4_A 94 QHRSHYFEGVLKCYLHET-----LETIINRLVEA 122 (152)
T ss_dssp GTCCHHHHTCSEECTTSB-----HHHHHHHHHHH
T ss_pred hhhhcccCCCeEECCCCc-----HHHHHHHHHHc
Confidence 4 78899999999 99999999753
No 55
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=98.97 E-value=4.3e-10 Score=100.10 Aligned_cols=89 Identities=19% Similarity=0.216 Sum_probs=59.8
Q ss_pred ccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCccccCcccccccccceec
Q 022005 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRYL 283 (304)
Q Consensus 204 ~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~~~~~~~~~v~ 283 (304)
++|+|+|++ +++++++++|+. ++++.+.+++++++||+++ .|+++|+++.+|++.... ..+++++|.+++.+++
T Consensus 1 m~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pV~d~-~~~~~Giv~~~dl~~~~~--~~~v~~~m~~~~~~v~ 74 (282)
T 2yzq_A 1 MRVKTIMTQ--NPVTITLPATRN-YALELFKKYKVRSFPVVNK-EGKLVGIISVKRILVNPD--EEQLAMLVKRDVPVVK 74 (282)
T ss_dssp CBHHHHSEE--SCCCEESSCC-------------CCEEEEECT-TCCEEEEEESSCC------------CCCBSCCCEEE
T ss_pred CchHHhccC--CCeEECCCCcHH-HHHHHHHHcCCCeEEEEcC-CCcEEEEEEHHHHHhhhc--cCCHHHHcCCCCcEEC
Confidence 368999985 788899999999 9999999999999999986 489999999999987653 4578999777789999
Q ss_pred CCCCCchhHHHHHHHHHhhc
Q 022005 284 ISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 284 ~~~~~~~~~l~~~l~~m~~~ 303 (304)
++++ +.++++.|.++
T Consensus 75 ~~~~-----l~~a~~~m~~~ 89 (282)
T 2yzq_A 75 ENDT-----LKKAAKLMLEY 89 (282)
T ss_dssp TTSB-----HHHHHHHHHHH
T ss_pred CCCc-----HHHHHHHHHHc
Confidence 9999 99999999753
No 56
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.95 E-value=1.2e-10 Score=112.82 Aligned_cols=118 Identities=14% Similarity=0.226 Sum_probs=22.8
Q ss_pred cccHHHHHHHHHhhcccccCCCCCC-----hhHHHHHhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhcCC
Q 022005 164 LFRRAELKTLVNLHGNEAGKGGELT-----HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGH 238 (304)
Q Consensus 164 ~~s~eEl~~lv~~~~~e~~~~g~l~-----~~e~~~i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~ 238 (304)
..+++|+...+... +..|.+. +++++++++++++ +|+|++ +++++++++++. ++++.+.++++
T Consensus 57 ~vt~~ela~ava~~----GglG~i~~~~~~e~~~~~I~~v~~~-----~~~m~~--~~~~v~~~~tv~-ea~~~~~~~~~ 124 (486)
T 2cu0_A 57 TVTEWEMAVAMARE----GGLGVIHRNMGIEEQVEQVKRVKRA-----ERLIVE--DVITIAPDETVD-FALFLMEKHGI 124 (486)
T ss_dssp TTCSHHHHHHHHHT----TCEEEECSSSCHHHHHHHHHHHHTC-----C-------------------------------
T ss_pred eecHHHHHHHHHhc----CCceeecCCCCHHHHHHHHHhhcch-----hhcccc--CceEECCCCCHH-HHHHHHHHcCC
Confidence 45778888887632 1123343 5778899998866 457874 889999999999 99999999999
Q ss_pred ceeeeeeCCCCcEEEEEEechhcccCCccccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 239 SRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 239 sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
+++||+++ ++++|+|+.+|++. +...+++++|.+++.+++++++ +.++++.|+++
T Consensus 125 ~~~pVvd~--~~lvGivt~~Dl~~---~~~~~v~~im~~~~~~v~~~~~-----l~eal~~m~~~ 179 (486)
T 2cu0_A 125 DGLPVVED--EKVVGIITKKDIAA---REGKLVKELMTKEVITVPESIE-----VEEALKIMIEN 179 (486)
T ss_dssp -----------------------------------------------------------------
T ss_pred cEEEEEEC--CEEEEEEEHHHhcc---CCCCCHHHHccCCCeEECCcCc-----HHHHHHHHHHc
Confidence 99999985 89999999999986 3456899998778999999999 99999999764
No 57
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.95 E-value=1.2e-10 Score=113.21 Aligned_cols=122 Identities=8% Similarity=0.085 Sum_probs=19.9
Q ss_pred cccHHHHHHHHHhhcccccCCCCC-----ChhHHHHHhhhhcccccccccc-ccccceEEEEeCCCCccHHHHHHHHhcC
Q 022005 164 LFRRAELKTLVNLHGNEAGKGGEL-----THDETTIIAGALELTEKTASDA-MTPIAETFAIDINAKLDKELMNLILEKG 237 (304)
Q Consensus 164 ~~s~eEl~~lv~~~~~e~~~~g~l-----~~~e~~~i~~~l~l~~~~V~di-Mtpr~~v~~l~~~~t~~~e~~~~~~~~~ 237 (304)
.++++++...+...+ ..|.+ .+++++++.++. ..|+ |+| +++++++++|+. ++++.+.+++
T Consensus 61 ~vt~~~la~~la~~g----g~G~I~~~~~~e~~~~~v~~V~------~~e~gM~~--~~~~v~~~~tv~-eal~~m~~~~ 127 (503)
T 1me8_A 61 SVSGEKMAIALAREG----GISFIFGSQSIESQAAMVHAVK------NFKAGFVV--SDSNVKPDQTFA-DVLAISQRTT 127 (503)
T ss_dssp TTCSHHHHHHHHHTT----CEEEECCSSCHHHHHHHHHHHH------TTTC-----------------------------
T ss_pred hhhHHHHHHHHHhCC----CcceeeCCCCHHHHHHHHhhhh------hcccCccc--CCeEECCCCcHH-HHHHHHHHcC
Confidence 457888887776321 11222 246677776654 3456 987 888999999999 9999999999
Q ss_pred CceeeeeeCC--CCcEEEEEEechhcccCCccccCcccccccc--cceecCCCCCchhHHHHHHHHHhhc
Q 022005 238 HSRVPVYYEE--PTNIIGLILVKNLLTIHPEDEVPVKSVTIRR--IPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 238 ~sr~PV~~~~--~~~ivGiv~~kDll~~~~~~~~~v~~~~~~~--~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
++++||++++ .|+++|+|+.+|++........+++++|.++ +.+++++++ +.++++.|+++
T Consensus 128 ~s~~pVvd~~~~~g~lvGiVt~~Dl~~~~~~~~~~V~diM~~~~~~~tv~~~~s-----l~ea~~~m~~~ 192 (503)
T 1me8_A 128 HNTVAVTDDGTPHGVLLGLVTQRDYPIDLTQTETKVSDMMTPFSKLVTAHQDTK-----LSEANKIIWEK 192 (503)
T ss_dssp ----------------------------------------------------------------------
T ss_pred ceEEEEEECCCcCCeEEEEEEHHHHHhhhccccCcHHHHhCCCCCCEEEcCCCc-----HHHHHHHHHHc
Confidence 9999999864 3799999999999863223356899997666 999999999 99999999764
No 58
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.91 E-value=1.6e-09 Score=77.02 Aligned_cols=65 Identities=12% Similarity=0.279 Sum_probs=54.5
Q ss_pred eEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC-Cc----cccCccccccccccee
Q 022005 215 ETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH-PE----DEVPVKSVTIRRIPRY 282 (304)
Q Consensus 215 ~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~-~~----~~~~v~~~~~~~~~~v 282 (304)
+++++++++|+. ++.+.|.+++++.+||.++ |+++|+++.+|+++.. .. .+.+++++|.+++.+|
T Consensus 1 k~vtv~p~~tv~-ea~~~M~~~~i~~~~V~d~--~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 1 KAIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp CEEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CCEEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 467899999999 9999999999999999974 7999999999997532 21 2458999998888764
No 59
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.89 E-value=9.8e-10 Score=96.42 Aligned_cols=57 Identities=14% Similarity=0.252 Sum_probs=51.2
Q ss_pred cccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhccc
Q 022005 203 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 263 (304)
Q Consensus 203 ~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~ 263 (304)
..+|+|+|++ ++.++++++++. ++++.|.+++++++||+|++ |+++|+++.+|+++.
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpVvd~~-~~l~Giit~~di~~~ 62 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLK-MAWNIMRDKNLKSIPVADGN-NHLLGMLSTSNITAT 62 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHH
Confidence 4589999985 678999999998 99999999999999999864 899999999999753
No 60
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.88 E-value=2.4e-10 Score=110.72 Aligned_cols=120 Identities=15% Similarity=0.200 Sum_probs=23.5
Q ss_pred cccHHHHHHHHHhhcccccCCCCCC-----hhHHHHHhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhcCC
Q 022005 164 LFRRAELKTLVNLHGNEAGKGGELT-----HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGH 238 (304)
Q Consensus 164 ~~s~eEl~~lv~~~~~e~~~~g~l~-----~~e~~~i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~ 238 (304)
.+|++++...+...+ .-|.+. +++++++.++ ++++++|++ +++++++++|+. ++++.+.++++
T Consensus 52 tVTe~~lA~ala~~G----GiGvI~~~~~~e~~a~~v~~v-----k~~~~~m~~--~~v~v~~~~tv~-ea~~~m~~~~~ 119 (490)
T 4avf_A 52 TVTEARLAIAMAQEG----GIGIIHKNMGIEQQAAEVRKV-----KKHETAIVR--DPVTVTPSTKII-ELLQMAREYGF 119 (490)
T ss_dssp TTCSHHHHHHHHHHT----SEEEECCSSCHHHHHHHHHHH-----HHCCC------------------------------
T ss_pred hhCHHHHHHHHHHcC----CCccccCCCCHHHHHHHhhhh-----cccccCccc--CceEeCCCCcHH-HHHHHHHHhCC
Confidence 468899998776322 124444 5667777776 457899985 788999999999 99999999999
Q ss_pred ceeeeeeCCCCcEEEEEEechhcccCCccccCcccccc-c-ccceecCCCCCchhHHHHHHHHHhhc
Q 022005 239 SRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTI-R-RIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 239 sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~~~~-~-~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
+++||++ + ++++|+|+.+|+.... ....+++++|. + ++.+++++++ +.++++.|+++
T Consensus 120 s~~pVvd-~-g~lvGIVt~rDl~~~~-~~~~~V~~vMtp~~~~vtv~~~~~-----l~ea~~~m~~~ 178 (490)
T 4avf_A 120 SGFPVVE-Q-GELVGIVTGRDLRVKP-NAGDTVAAIMTPKDKLVTAREGTP-----LEEMKAKLYEN 178 (490)
T ss_dssp -------------------------------------------------------------------
T ss_pred CEEEEEE-C-CEEEEEEEhHHhhhcc-ccCCcHHHHhccCCCCEEECCCCc-----HHHHHHHHHHc
Confidence 9999998 3 8999999999996432 33568999976 4 6999999999 99999999764
No 61
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=98.83 E-value=5.6e-09 Score=92.78 Aligned_cols=93 Identities=17% Similarity=0.189 Sum_probs=76.1
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcc-cCCc----cccCcccccc
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLT-IHPE----DEVPVKSVTI 276 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~-~~~~----~~~~v~~~~~ 276 (304)
.+.+++++|++ ++.++++++++. ++++.+.+++++++||++++ |+++|+++.+|+++ ...+ ...+++++|.
T Consensus 58 ~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~di~~~~~~~~~~~~~~~v~~~m~ 133 (282)
T 2yzq_A 58 DEEQLAMLVKR--DVPVVKENDTLK-KAAKLMLEYDYRRVVVVDSK-GKPVGILTVGDIIRRYFAKSEKYKGVEIEPYYQ 133 (282)
T ss_dssp ------CCCBS--CCCEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTCSGGGGCBSTTTSB
T ss_pred ccCCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHhccCCcccCcHHHHhC
Confidence 35789999986 577899999998 99999999999999999865 89999999999987 5542 2457899987
Q ss_pred cccceecCCCCCchhHHHHHHHHHhhc
Q 022005 277 RRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 277 ~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
+++.+++++++ +.++++.|.++
T Consensus 134 ~~~~~v~~~~~-----l~~~~~~~~~~ 155 (282)
T 2yzq_A 134 RYVSIVWEGTP-----LKAALKALLLS 155 (282)
T ss_dssp SCCCCEETTSB-----HHHHHHHHHTC
T ss_pred CCCEEECCCCC-----HHHHHHHHHHc
Confidence 88999999999 99999999753
No 62
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.80 E-value=7e-09 Score=72.70 Aligned_cols=63 Identities=13% Similarity=0.265 Sum_probs=53.0
Q ss_pred EEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCC-----ccccCcccccccccce
Q 022005 216 TFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP-----EDEVPVKSVTIRRIPR 281 (304)
Q Consensus 216 v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~-----~~~~~v~~~~~~~~~~ 281 (304)
++++++++++. ++++.|.+++++++||+++ |+++|+++.+|+++... ....+++++|.+++.+
T Consensus 2 ~~~v~~~~~~~-~a~~~m~~~~~~~~pV~d~--~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~ 69 (70)
T 3fio_A 2 AIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVK 69 (70)
T ss_dssp EEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTC
T ss_pred CeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeE
Confidence 57899999998 9999999999999999985 89999999999987532 1246799997766654
No 63
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=98.79 E-value=5.7e-09 Score=93.70 Aligned_cols=93 Identities=16% Similarity=0.196 Sum_probs=81.0
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCc-------------
Q 022005 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE------------- 266 (304)
Q Consensus 200 ~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~------------- 266 (304)
+....+|+|+|++ +++++++++|+. ++++.|.+++++++||++ ++++|+++.+|+++....
T Consensus 16 ~~~~~~V~dim~~--~~~~v~~~~~v~-~a~~~m~~~~~~~~~V~d---~~l~GivT~~Di~~~~~~~~~~~~~~~~~~~ 89 (296)
T 3ddj_A 16 YFQGMNIETLMIK--NPPILSKEDRLG-SAFKKINEGGIGRIIVAN---EKIEGLLTTRDLLSTVESYCKDSCSQGDLYH 89 (296)
T ss_dssp TTCCSSGGGTCEE--SCCEECTTSBHH-HHHHHTTGGGCCEEEEES---SSEEEEEEHHHHHGGGTTCC---CCHHHHHH
T ss_pred hhcccCHHHhccC--CCcEECCCccHH-HHHHHHHHCCCceEEEEC---CeEEEEEeHHHHHHHhcccccccccchhhHH
Confidence 4466789999986 788999999998 999999999999999997 799999999999876421
Q ss_pred -cccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 267 -DEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 267 -~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
...+++++|.+++.+++++++ +.++++.|.++
T Consensus 90 ~~~~~v~~im~~~~~~v~~~~~-----~~~a~~~m~~~ 122 (296)
T 3ddj_A 90 ISTTPIIDYMTPNPVTVYNTSD-----EFTAINIMVTR 122 (296)
T ss_dssp HHTSBGGGTSEESCCCEETTSC-----HHHHHHHHHHH
T ss_pred HhcccHHHhccCCCEEEcCCCC-----HHHHHHHHHHc
Confidence 135799998889999999999 99999999753
No 64
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=98.78 E-value=4.4e-09 Score=95.62 Aligned_cols=94 Identities=11% Similarity=0.137 Sum_probs=79.9
Q ss_pred ccccccccc---ccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCcc-----ccCcc
Q 022005 201 LTEKTASDA---MTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPED-----EVPVK 272 (304)
Q Consensus 201 l~~~~V~di---Mtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~-----~~~v~ 272 (304)
+.+.+++++ |+ .+++++++++++. ++.+.|.+++++++||++++ |+++|+++.+|+++...++ ..+++
T Consensus 184 ~~~~~v~~~~~~m~--~~~~~v~~~~~~~-~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~v~ 259 (323)
T 3t4n_C 184 FLKIPIGDLNIITQ--DNMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSVG 259 (323)
T ss_dssp GCCSBGGGTTCSBC--TTCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEETTHHHHHHHTTHHHHTTSBHH
T ss_pred hhhCcHHHcCCCCC--CCcEEECCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEeHHHHHHHHhhchhhhccCCHH
Confidence 456789999 75 4778999999998 99999999999999999864 8999999999998754321 35788
Q ss_pred ccccc------ccceecCCCCCchhHHHHHHHHHhhc
Q 022005 273 SVTIR------RIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 273 ~~~~~------~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
++|.+ ++.+++++++ +.++++.|.++
T Consensus 260 ~~m~~~~~~~~~~~~v~~~~~-----l~~~~~~m~~~ 291 (323)
T 3t4n_C 260 EALMRRSDDFEGVYTCTKNDK-----LSTIMDNIRKA 291 (323)
T ss_dssp HHGGGSCTTCCCCEEECTTCB-----HHHHHHHHHHS
T ss_pred HHHhhccccCCCCEEECCCCC-----HHHHHHHHHHh
Confidence 99766 6899999999 99999999764
No 65
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.75 E-value=6.2e-09 Score=92.22 Aligned_cols=60 Identities=12% Similarity=0.163 Sum_probs=53.3
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCC-CCcEEEEEEechhcc
Q 022005 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEE-PTNIIGLILVKNLLT 262 (304)
Q Consensus 200 ~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~-~~~ivGiv~~kDll~ 262 (304)
...+++|+|+|++ +++++++++++. ++.+.|.+++++++||++++ .++++|+|+.+|+++
T Consensus 9 ~~~~~~v~diMt~--~vvtv~~~~tv~-~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~ 69 (250)
T 2d4z_A 9 NKYNIQVGDIMVR--DVTSIASTSTYG-DLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEG 69 (250)
T ss_dssp CCSSCBTTSSSBS--SCCCEETTCBHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHH
T ss_pred ccCCCChHHhcCC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHH
Confidence 4467899999986 789999999998 99999999999999999864 257999999999974
No 66
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.63 E-value=1.6e-08 Score=88.68 Aligned_cols=60 Identities=20% Similarity=0.278 Sum_probs=50.1
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
...+|+|+|+| .+++++++++++. ++++.|.+++++++||+|++ |+++|+++.+|+++..
T Consensus 183 ~~~~v~~im~~-~~~~~~~~~~~~~-~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 183 QSLPVDYVMTK-DNLVAVSTDDLVE-DVKVTMSETRYSNYPVIDEN-NKVVGSIARFHLISTH 242 (245)
T ss_dssp GGSBHHHHSBC-TTCCCEETTSBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEECC------
T ss_pred cCCceeeEecC-CccEEECCCCcHH-HHHHHHHhcCCceEEEEcCC-CeEEEEEEHHHhhchh
Confidence 45789999998 7889999999998 99999999999999999865 8999999999998754
No 67
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=98.58 E-value=3.9e-08 Score=89.68 Aligned_cols=93 Identities=11% Similarity=0.167 Sum_probs=77.7
Q ss_pred ccccccc---cccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCc-----cccCccc
Q 022005 202 TEKTASD---AMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-----DEVPVKS 273 (304)
Q Consensus 202 ~~~~V~d---iMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~-----~~~~v~~ 273 (304)
.+.++++ +|++ ++.++++++++. ++.+.+.+++++++||++++ |+++|+++.+|+++...+ ...++.+
T Consensus 180 ~~~~v~~l~~~m~~--~~~~v~~~~~~~-~~~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~v~~ 255 (334)
T 2qrd_G 180 LRVPLNQMTIGTWS--NLATASMETKVY-DVIKMLAEKNISAVPIVNSE-GTLLNVYESVDVMHLIQDGDYSNLDLSVGE 255 (334)
T ss_dssp CCCBGGGSSCSBCS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEETHHHHHHHTTSCGGGGGSBHHH
T ss_pred hhCcHHHhCCcccC--CceEECCCCcHH-HHHHHHHHcCCcEEEEEcCC-CcEEEEEEHHHHHHHhhccccccccCcHHH
Confidence 4568899 4874 677899999998 99999999999999999864 899999999999875322 2357888
Q ss_pred cccc------ccceecCCCCCchhHHHHHHHHHhhc
Q 022005 274 VTIR------RIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 274 ~~~~------~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
+|.+ ++.+++++++ +.++++.|.++
T Consensus 256 ~m~~~~~~~~~~~~v~~~~~-----l~~~~~~m~~~ 286 (334)
T 2qrd_G 256 ALLKRPANFDGVHTCRATDR-----LDGIFDAIKHS 286 (334)
T ss_dssp HHTTCCTTCCCCCEECTTCB-----HHHHHHHHHHS
T ss_pred HHhcccccCCCCEEECCCCc-----HHHHHHHHHHc
Confidence 8763 7899999999 99999999764
No 68
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.58 E-value=9.5e-09 Score=99.63 Aligned_cols=98 Identities=11% Similarity=0.191 Sum_probs=5.6
Q ss_pred HHHHHhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCccccC
Q 022005 191 ETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVP 270 (304)
Q Consensus 191 e~~~i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~ 270 (304)
.++.+.++. +++|+|++ +++++++++++. ++++.+.+++++++||+|++ ++++|+|+.+|++... +...+
T Consensus 87 ~~~~v~~v~-----~~~~iM~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~lvGivt~~Dl~~~~-~~~~~ 156 (494)
T 1vrd_A 87 QARQVSIVK-----KTENGIIY--DPITVTPDMTVK-EAIDLMAEYKIGGLPVVDEE-GRLVGLLTNRDVRFEK-NLSKK 156 (494)
T ss_dssp HHHHHHHHH-----TC----------------------------------------------------------------
T ss_pred HHHHHHhhh-----hHhhcCcc--CCeEECCCCCHH-HHHHHHHHcCceEEEEEcCC-CEEEEEEEHHHHHhhc-CCCCc
Confidence 344555554 56889986 788999999999 99999999999999999864 7999999999998642 23568
Q ss_pred ccccccc--ccceecCCCCCchhHHHHHHHHHhhc
Q 022005 271 VKSVTIR--RIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 271 v~~~~~~--~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
+.++|.+ ++.+++++++ +.++++.|+++
T Consensus 157 v~~im~~~~~~~~v~~~~~-----l~ea~~~m~~~ 186 (494)
T 1vrd_A 157 IKDLMTPREKLIVAPPDIS-----LEKAKEILHQH 186 (494)
T ss_dssp -----------------------------------
T ss_pred HHHHhCCCCCCeEECCCCC-----HHHHHHHHHHc
Confidence 9999876 8999999999 99999998753
No 69
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=98.56 E-value=9.1e-08 Score=87.17 Aligned_cols=93 Identities=12% Similarity=0.188 Sum_probs=76.1
Q ss_pred ccccccc--ccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCcc-----ccCccccc
Q 022005 203 EKTASDA--MTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPED-----EVPVKSVT 275 (304)
Q Consensus 203 ~~~V~di--Mtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~-----~~~v~~~~ 275 (304)
..+++++ |+ ..+++++++++++. ++.+.+.+++++++||++++ |+++|+++.+|+++...++ ..++.++|
T Consensus 189 ~~~v~~~~v~~-~~~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~ 265 (330)
T 2v8q_E 189 SKSLEELQIGT-YANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKAL 265 (330)
T ss_dssp GSBHHHHTCSB-CSSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHG
T ss_pred cCCHHHhcccC-cCCceEECCCCCHH-HHHHHHHHcCCCeEEEECCC-CcEEEEEEHHHHHHHHhccccccccCcHHHHH
Confidence 3456676 54 25778899999998 99999999999999999864 8999999999998765321 35677775
Q ss_pred ------ccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 276 ------IRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 276 ------~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
.+++.+++++++ +.++++.|.++
T Consensus 266 ~~~~~~~~~~~~v~~~~~-----l~~a~~~m~~~ 294 (330)
T 2v8q_E 266 QHRSHYFEGVLKCYLHET-----LEAIINRLVEA 294 (330)
T ss_dssp GGCCSCCCSCCEECTTSB-----HHHHHHHHHHH
T ss_pred hccccccCCCeEECCCCc-----HHHHHHHHHHC
Confidence 378999999999 99999999764
No 70
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.51 E-value=5.7e-08 Score=80.22 Aligned_cols=61 Identities=20% Similarity=0.272 Sum_probs=54.3
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCc
Q 022005 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE 266 (304)
Q Consensus 201 l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~ 266 (304)
..+.+|+++|++ +++++++++++. ++++.|.+++++++||+++ |+++|+|+.+|++++...
T Consensus 102 ~~~~~v~~im~~--~~~tv~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 102 GRKLTASAVMTQ--PVVTAAPEDSVG-SIADQMRRHGIHRIPVVQD--GVPVGIVTRRDLLKLLLL 162 (170)
T ss_dssp HTTCBHHHHCBC--CSCCBCTTSBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHTTTSCC
T ss_pred ccccchhhhccc--CcccCCcchhHH-HHHHHHHHcCCcEEEEEEC--CEEEEEEEHHHHHHHHHh
Confidence 356789999986 788999999998 9999999999999999984 799999999999987543
No 71
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.48 E-value=2.4e-08 Score=85.98 Aligned_cols=92 Identities=14% Similarity=0.187 Sum_probs=66.0
Q ss_pred ccHHHHHHHHHhhcccccCCCCCChhHHHHHhhhhccccc-------cccccccccceEEEEeCCCCccHHHHHHHHhcC
Q 022005 165 FRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEK-------TASDAMTPIAETFAIDINAKLDKELMNLILEKG 237 (304)
Q Consensus 165 ~s~eEl~~lv~~~~~e~~~~g~l~~~e~~~i~~~l~l~~~-------~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~ 237 (304)
.+-+|...++..++ .++..--++...+.+++...+. +|+|+|++ +++++++++++. ++.+.|.+++
T Consensus 30 ~tv~ea~~~m~~~~----~~~~pVvd~~~~l~Givt~~dl~~~~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~ 102 (213)
T 1vr9_A 30 ATVRECLHRMRQYQ----TNECIVKDREGHFRGVVNKEDLLDLDLDSSVFNKVSL--PDFFVHEEDNIT-HALLLFLEHQ 102 (213)
T ss_dssp CBHHHHHHHHHHTT----SSEEEEECTTSBEEEEEEGGGGTTSCTTSBSGGGCBC--TTCCEETTSBHH-HHHHHHHHCC
T ss_pred CcHHHHHHHHHHCC----CCEEEEEcCCCEEEEEEEHHHHHhhcCCCcHHHHccC--CCEEECCCCcHH-HHHHHHHHhC
Confidence 45667777665321 1121111112234455554444 69999997 677899999998 9999999999
Q ss_pred CceeeeeeCCCCcEEEEEEechhcccC
Q 022005 238 HSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 238 ~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
++++||++++ |+++|+++.+|+++..
T Consensus 103 ~~~lpVvd~~-g~lvGiit~~Dil~~~ 128 (213)
T 1vr9_A 103 EPYLPVVDEE-MRLKGAVSLHDFLEAL 128 (213)
T ss_dssp CSEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred CCEEEEEcCC-CEEEEEEEHHHHHHHH
Confidence 9999999864 8999999999998753
No 72
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.39 E-value=2.2e-07 Score=75.73 Aligned_cols=63 Identities=21% Similarity=0.266 Sum_probs=55.9
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCC---cEEEEEEechhcccC
Q 022005 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPT---NIIGLILVKNLLTIH 264 (304)
Q Consensus 200 ~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~---~ivGiv~~kDll~~~ 264 (304)
...+.+++|+|+++.+++++++++++. ++++.|.+++++++||++++ | +++|+|+.+|+++..
T Consensus 77 ~~~~~~v~~~m~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~~~vGiit~~dil~~l 142 (159)
T 3fv6_A 77 ELTSVPVHIIMTRMPNITVCRREDYVM-DIAKHLIEKQIDALPVIKDT-DKGFEVIGRVTKTNMTKIL 142 (159)
T ss_dssp CTTTCBGGGTSEETTSCCCBCTTSBHH-HHHHHHHHHTCSEEEEEEEC-SSSEEEEEEEEHHHHHHHH
T ss_pred cccCcCHHHHHcCCCCcEEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CcceeEEEEEEHHHHHHHH
Confidence 346779999999877888999999998 99999999999999999864 5 899999999998753
No 73
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.38 E-value=3.4e-08 Score=96.17 Aligned_cols=92 Identities=9% Similarity=0.220 Sum_probs=47.5
Q ss_pred ccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCC--CCcEEEEEEechhcccCC-ccccCccccccc--c
Q 022005 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEE--PTNIIGLILVKNLLTIHP-EDEVPVKSVTIR--R 278 (304)
Q Consensus 204 ~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~--~~~ivGiv~~kDll~~~~-~~~~~v~~~~~~--~ 278 (304)
++++++|++ +++++++++++. ++++.+.+++++++||+|++ .++++|+|+.+|+..... ....+++++|.+ +
T Consensus 108 ~~~~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~~~~~v~~vm~~~~~ 184 (514)
T 1jcn_A 108 KNFEQGFIT--DPVVLSPSHTVG-DVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRIE 184 (514)
T ss_dssp HTCCTTSCS--SCCCCCC------------------CEESCC--------CCEECTTTTC----------------CCBC
T ss_pred hhhhhcccc--CCEEECCCCCHH-HHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhccCCCCHHHHhCCCCC
Confidence 368899985 677899999999 99999999999999999863 479999999999976431 234689999877 8
Q ss_pred cceecCCCCCchhHHHHHHHHHhhc
Q 022005 279 IPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 279 ~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
+.+++++++ +.++++.|.++
T Consensus 185 ~~tv~~~~~-----l~ea~~~m~~~ 204 (514)
T 1jcn_A 185 LVVAPAGVT-----LKEANEILQRS 204 (514)
T ss_dssp CCCEETTCC-----STTTTTHHHHH
T ss_pred CeEECCCCC-----HHHHHHHHHHc
Confidence 999999999 99998888653
No 74
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.38 E-value=2e-07 Score=75.61 Aligned_cols=59 Identities=24% Similarity=0.332 Sum_probs=53.2
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 201 l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
..+.+++|+|++ ++.++++++++. ++++.|.+++++++||++ + |+++|+|+.+|+++..
T Consensus 75 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~l 133 (157)
T 4fry_A 75 SKATRVEEIMTA--KVRYVEPSQSTD-ECMALMTEHRMRHLPVLD-G-GKLIGLISIGDLVKSV 133 (157)
T ss_dssp SSSCBHHHHSBS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHH
T ss_pred ccccCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHH
Confidence 357899999986 677899999998 999999999999999998 4 8999999999998864
No 75
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.37 E-value=3.4e-07 Score=72.61 Aligned_cols=60 Identities=13% Similarity=0.167 Sum_probs=52.6
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCC
Q 022005 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP 265 (304)
Q Consensus 201 l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~ 265 (304)
..+.+++++|.| +.++++++++. ++++.|.+++.+++||++++ |+++|+|+.+|+++...
T Consensus 67 ~~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 67 GDSDDVKKLLRP---ATFVPESKRLN-VLLREFRANHNHMAIVIDEY-GGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp GGGCCGGGTCBC---CCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHTTC-
T ss_pred CCCcCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHHh
Confidence 356789999964 67899999998 99999999999999999864 89999999999998654
No 76
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.37 E-value=2.4e-07 Score=71.51 Aligned_cols=59 Identities=17% Similarity=0.279 Sum_probs=52.2
Q ss_pred cccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCC
Q 022005 203 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP 265 (304)
Q Consensus 203 ~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~ 265 (304)
..+++++|.+ ++.++++++++. ++++.+.+++++++||++++ |+++|+++.+|+++...
T Consensus 61 ~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 61 KKTIEEIMTR--NVITAHEDEPVD-HVAIKMSKYNISGVPVVDDY-RRVVGIVTSEDISRLFG 119 (122)
T ss_dssp CCBGGGTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHC
T ss_pred ccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhCCCeEEEECCC-CCEEEEEeHHHHHHHhh
Confidence 3489999986 677899999998 99999999999999999864 89999999999987543
No 77
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.34 E-value=9.2e-08 Score=91.98 Aligned_cols=100 Identities=13% Similarity=0.307 Sum_probs=9.0
Q ss_pred hhHHHHHhhhhccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCC--CCcEEEEEEechhcccCCc
Q 022005 189 HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEE--PTNIIGLILVKNLLTIHPE 266 (304)
Q Consensus 189 ~~e~~~i~~~l~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~--~~~ivGiv~~kDll~~~~~ 266 (304)
+++.++++.+-..+ ..|+ .+++++.+++|+. |+.+++.+++||.+||+++. .++++|||+-+|+... +
T Consensus 128 e~Qa~~V~~VKr~e-----~g~i--~dPvtl~P~~Tv~-da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~--d 197 (556)
T 4af0_A 128 EEQAAMVRRVKKYE-----NGFI--TDPLCLGPDATVG-DVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ--D 197 (556)
T ss_dssp HHHHHHHHHHHHCC-----C------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcc-----cCcc--CCCeEcCCCCCHH-HHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc--c
Confidence 34567777775444 4455 3788999999999 99999999999999999853 4789999999998653 3
Q ss_pred cccCcccccccccceecCCCCCchhHHHHHHHHHhhc
Q 022005 267 DEVPVKSVTIRRIPRYLISLGKCSCALFRSLSLFSTS 303 (304)
Q Consensus 267 ~~~~v~~~~~~~~~~v~~~~~~~~~~l~~~l~~m~~~ 303 (304)
...+++++|.+++.+++++.+ +.++.+.|+++
T Consensus 198 ~~~~V~evMT~~lvt~~~~~~-----leeA~~iL~~~ 229 (556)
T 4af0_A 198 AETPIKSVMTTEVVTGSSPIT-----LEKANSLLRET 229 (556)
T ss_dssp -------------------------------------
T ss_pred cceEhhhhcccceEEecCCCC-----HHHHHHHHHHc
Confidence 456899999999999999999 89988888653
No 78
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.29 E-value=1.1e-06 Score=73.39 Aligned_cols=62 Identities=13% Similarity=0.208 Sum_probs=54.9
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCc
Q 022005 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE 266 (304)
Q Consensus 201 l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~ 266 (304)
..+.+++++|.+ ++.++++++++. ++++.|.+++++++||++++ |+++|+|+.+|+++...+
T Consensus 72 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 72 PDEVPIRLVMRK--PIPKVKSDYDVK-DVAAYLSENGLERCAVVDDP-GRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp GGGSBGGGTSBS--SCCEEETTCBHH-HHHHHHHHHTCSEEEEECTT-CCEEEEEEHHHHTTTSCH
T ss_pred cccCCHHHHhCC--CCcEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHHHh
Confidence 456789999986 677899999998 99999999999999999864 899999999999986544
No 79
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.28 E-value=3.8e-07 Score=72.92 Aligned_cols=60 Identities=23% Similarity=0.451 Sum_probs=52.4
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 201 l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
..+.+++++|.+ +++++++++++. ++++.|.+++++++||++++ |+++|+|+.+|+++..
T Consensus 82 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dil~~~ 141 (152)
T 4gqw_A 82 TNGKLVGDLMTP--APLVVEEKTNLE-DAAKILLETKYRRLPVVDSD-GKLVGIITRGNVVRAA 141 (152)
T ss_dssp --CCBHHHHSEE--SCCCEESSSBHH-HHHHHHHHSSCCEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred hccccHHHhcCC--CceEECCCCcHH-HHHHHHHHCCCCEEEEECCC-CcEEEEEEHHHHHHHH
Confidence 456789999987 567899999998 99999999999999999864 8999999999998754
No 80
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.28 E-value=6.4e-07 Score=70.57 Aligned_cols=59 Identities=24% Similarity=0.406 Sum_probs=53.1
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 201 l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
..+.+++|+|++ ++.++++++++. ++++.|.+++++++||++ + |+++|+|+.+|+++..
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dll~~~ 129 (135)
T 2rc3_A 71 VKDTQVKEIMTR--QVAYVDLNNTNE-DCMALITEMRVRHLPVLD-D-GKVIGLLSIGDLVKDA 129 (135)
T ss_dssp GGGSBGGGTSBC--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHH
T ss_pred cccCCHHHhccC--CCeEECCCCcHH-HHHHHHHHhCCCEEEEEe-C-CEEEEEEEHHHHHHHH
Confidence 467899999986 677899999998 999999999999999998 4 8999999999998754
No 81
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.27 E-value=5e-07 Score=69.94 Aligned_cols=59 Identities=22% Similarity=0.288 Sum_probs=53.1
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 201 l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
..+.+++++|++ ++.++++++++. ++++.+.+++++++||+++ |+++|+++.+|+++..
T Consensus 62 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~--~~~~Gvit~~dl~~~l 120 (125)
T 1pbj_A 62 LAEVKVWEVMER--DLVTISPRATIK-EAAEKMVKNVVWRLLVEED--DEIIGVISATDILRAK 120 (125)
T ss_dssp TTTSBHHHHCBC--GGGEECTTSCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHH
T ss_pred ccccCHHHHcCC--CCeEECCCCCHH-HHHHHHHhcCCcEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 457789999986 677899999998 9999999999999999985 8999999999998754
No 82
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.27 E-value=6.1e-07 Score=70.14 Aligned_cols=58 Identities=10% Similarity=0.201 Sum_probs=51.3
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
.+.+++++|.| +.++++++++. ++++.|.+++.+++||++++ |+++|+|+.+|+++..
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 67 EAFSMDKVLRT---AVVVPESKRVD-RMLKEFRSQRYHMAIVIDEF-GGVSGLVTIEDILELI 124 (127)
T ss_dssp CCCCHHHHCBC---CCEEETTCBHH-HHHHHHHHTTCCEEEEECTT-SCEEEEEEHHHHHHHC
T ss_pred CCCCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHH
Confidence 46789999964 56899999998 99999999999999999864 8999999999998754
No 83
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.27 E-value=9.3e-07 Score=69.34 Aligned_cols=58 Identities=17% Similarity=0.184 Sum_probs=51.0
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
.+.+++++|.| +.++++++++. ++++.|.+++..++||++++ |+++|+++.+|+++..
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~pVvd~~-g~~~Giit~~Dil~~l 124 (129)
T 3jtf_A 67 PALDIRSLVRP---AVFIPEVKRLN-VLLREFRASRNHLAIVIDEH-GGISGLVTMEDVLEQI 124 (129)
T ss_dssp TTSCGGGGCBC---CCEEETTCBHH-HHHHHHHTSSCCEEEEECC--CCEEEEEEHHHHHHHH
T ss_pred CCcCHHHHhCC---CeEeCCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHH
Confidence 46789999964 67899999998 99999999999999999864 8999999999998753
No 84
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.25 E-value=1.2e-06 Score=70.29 Aligned_cols=57 Identities=14% Similarity=0.170 Sum_probs=51.2
Q ss_pred cccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 203 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 203 ~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
+.+++++| + ++.++++++++. ++++.|.+++.+++||++++ |+++|+|+.+|+++..
T Consensus 87 ~~~v~~~m-~--~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~~-g~~~Giit~~dil~~l 143 (148)
T 3lv9_A 87 KIELEEIL-R--DIIYISENLTID-KALERIRKEKLQLAIVVDEY-GGTSGVVTIEDILEEI 143 (148)
T ss_dssp CCCGGGTC-B--CCEEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SSEEEEEEHHHHHHHH
T ss_pred CccHHHhc-C--CCeEECCCCCHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHH
Confidence 77899999 3 567899999998 99999999999999999864 8999999999998754
No 85
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.24 E-value=1.5e-06 Score=71.85 Aligned_cols=58 Identities=16% Similarity=0.135 Sum_probs=51.8
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
.+.+++++| + ++.++++++++. ++++.|.+++.+++||++++ |+++|+|+.+|+++..
T Consensus 105 ~~~~v~~im-~--~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dil~~l 162 (172)
T 3lhh_A 105 ERLELVDLV-K--NCNFVPNSLSGM-ELLEHFRTTGSQMVFVVDEY-GDLKGLVTLQDMMDAL 162 (172)
T ss_dssp CCCCGGGGC-B--CCEEEETTCCHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred CcccHHHHh-c--CCeEeCCCCCHH-HHHHHHHHcCCeEEEEEeCC-CCEEEEeeHHHHHHHH
Confidence 467899999 3 678999999998 99999999999999999864 8999999999998754
No 86
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.23 E-value=1e-06 Score=72.18 Aligned_cols=61 Identities=21% Similarity=0.305 Sum_probs=54.2
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCC
Q 022005 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP 265 (304)
Q Consensus 200 ~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~ 265 (304)
...+.+|+++|++ ++.++++++++. ++++.|.+++++++||+++ |+++|+|+.+|+++...
T Consensus 89 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~~~Giit~~dil~~~~ 149 (165)
T 3fhm_A 89 ASLQQSVSVAMTK--NVVRCQHNSTTD-QLMEIMTGGRFRHVPVEEN--GRLAGIISIGDVVKARI 149 (165)
T ss_dssp GGGTSBGGGTSBS--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHTT
T ss_pred ccccCCHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 3456899999985 677899999998 9999999999999999985 89999999999998653
No 87
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.23 E-value=1.2e-06 Score=70.75 Aligned_cols=58 Identities=17% Similarity=0.150 Sum_probs=51.9
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
.+.+++++| + ++.++++++++. ++++.|.+++..++||++++ |+++|+|+.+|+++..
T Consensus 84 ~~~~v~~~m-~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd~~-g~~vGivt~~dil~~l 141 (153)
T 3oco_A 84 DKAKISTIM-R--DIVSVPENMKVP-DVMEEMSAHRVPMAIVIDEY-GGTSGIITDKDVYEEL 141 (153)
T ss_dssp TTSBGGGTC-B--CCEEEETTSBHH-HHHHHHHHTTCSCEEEECTT-SCEEEEECHHHHHHHH
T ss_pred CCCcHHHHh-C--CCeEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CCEEEEeeHHHHHHHH
Confidence 367899999 3 678999999998 99999999999999999864 8999999999998754
No 88
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.22 E-value=6.4e-07 Score=70.29 Aligned_cols=59 Identities=25% Similarity=0.465 Sum_probs=53.0
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP 265 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~ 265 (304)
.+.+++++|++ ++.++++++++. ++++.|.+++++++||+++ |+++|+++.+|+++...
T Consensus 72 ~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~--g~~~Giit~~dil~~l~ 130 (133)
T 1y5h_A 72 NTATAGELARD--SIYYVDANASIQ-EMLNVMEEHQVRRVPVISE--HRLVGIVTEADIARHLP 130 (133)
T ss_dssp TTSBHHHHHTT--CCCCEETTCCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHTCC
T ss_pred cccCHHHHhcC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 46789999986 677899999998 9999999999999999985 79999999999987653
No 89
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.22 E-value=7.9e-07 Score=69.74 Aligned_cols=58 Identities=19% Similarity=0.326 Sum_probs=52.0
Q ss_pred cccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 203 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 203 ~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
+.+++++|.+ ++.++++++++. ++++.+.+++++++||++++ |+++|+|+.+|+++..
T Consensus 66 ~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dll~~~ 123 (133)
T 2ef7_A 66 ETKAEEFMTA--SLITIREDSPIT-GALALMRQFNIRHLPVVDDK-GNLKGIISIRDITRAI 123 (133)
T ss_dssp TCBGGGTSEE--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred ccCHHHHcCC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEEHHHHHHHH
Confidence 5689999986 677899999998 99999999999999999864 8999999999998754
No 90
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.22 E-value=7.5e-07 Score=70.62 Aligned_cols=62 Identities=16% Similarity=0.232 Sum_probs=52.2
Q ss_pred cccccccccccccc----eEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 201 LTEKTASDAMTPIA----ETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 201 l~~~~V~diMtpr~----~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
..+.+++++|+++. ++.++++++++. ++++.|.+++++++||++++ |+++|+|+.+|+++..
T Consensus 74 ~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~~-g~~~Giit~~dil~~l 139 (144)
T 2nyc_A 74 DLSLSVGEALMRRSDDFEGVYTCTKNDKLS-TIMDNIRKARVHRFFVVDDV-GRLVGVLTLSDILKYI 139 (144)
T ss_dssp -CCSBHHHHHHHCC------CEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred cCCccHHHHHhcCccccCCCeEECCCCcHH-HHHHHHHHCCCCEEEEECCC-CCEEEEEEHHHHHHHH
Confidence 34678999998642 678999999998 99999999999999999864 8999999999998753
No 91
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.22 E-value=8.2e-07 Score=69.42 Aligned_cols=57 Identities=14% Similarity=0.133 Sum_probs=51.0
Q ss_pred ccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 204 ~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
.+++++|++ ++.++++++++. ++++.+.+++++++||++++ |+++|+++.+|+++..
T Consensus 68 ~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~lpVvd~~-g~~~Giit~~dll~~l 124 (128)
T 3gby_A 68 EKLGEELLE--TVRSYRPGEQLF-DNLISVAAAKCSVVPLADED-GRYEGVVSRKRILGFL 124 (128)
T ss_dssp CBCCGGGCB--CCCCBCTTSBGG-GSHHHHHHCSSSEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred CcHHHHccC--CCcEECCCCCHH-HHHHHHHhCCCcEEEEECCC-CCEEEEEEHHHHHHHH
Confidence 679999985 677899999999 99999999999999999864 8999999999998753
No 92
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.21 E-value=5.2e-07 Score=74.43 Aligned_cols=61 Identities=25% Similarity=0.436 Sum_probs=53.7
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 200 ~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
...+.+++++|++ ++.++++++++. ++++.|.+++++++||++++ |+++|+|+.+|+++..
T Consensus 94 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~~ 154 (180)
T 3sl7_A 94 KTYGKVVGDLMTP--SPLVVRDSTNLE-DAARLLLETKFRRLPVVDAD-GKLIGILTRGNVVRAA 154 (180)
T ss_dssp TTTTCBHHHHSEE--SCCCEETTSBHH-HHHHHHTTSTTCEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred ccccccHHHHhCC--CceEeCCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEEHHHHHHHH
Confidence 3457789999986 567899999998 99999999999999999864 8999999999998753
No 93
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.20 E-value=5.8e-07 Score=72.95 Aligned_cols=59 Identities=24% Similarity=0.396 Sum_probs=52.7
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 201 l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
..+.+++|+|+| +.++++++++. ++++.|.+++++++||++++ |+++|+|+.+|+++..
T Consensus 93 ~~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dll~~l 151 (157)
T 1o50_A 93 LIAKNASEIMLD---PVYVHMDTPLE-EALKLMIDNNIQEMPVVDEK-GEIVGDLNSLEILLAL 151 (157)
T ss_dssp CSSCBHHHHCBC---CCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred HcCCcHHHHcCC---CeEECCCCCHH-HHHHHHHHCCCcEEEEEcCC-CEEEEEEEHHHHHHHH
Confidence 467789999986 67899999998 99999999999999999854 8999999999998754
No 94
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.20 E-value=9.9e-07 Score=71.67 Aligned_cols=56 Identities=14% Similarity=0.196 Sum_probs=50.1
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcc
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLT 262 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~ 262 (304)
.+.+++++|.| +.++++++++. ++++.|.+++.+++||++++ |+++|+|+.+|+++
T Consensus 101 ~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-g~~~Givt~~Dile 156 (156)
T 3oi8_A 101 EQFHLKSILRP---AVFVPEGKSLT-ALLKEFREQRNHMAIVIDEY-GGTSGLVTFEDIIE 156 (156)
T ss_dssp GGCCHHHHCBC---CCEEETTSBHH-HHHHHHHHTTCCEEEEECTT-SSEEEEEEHHHHCC
T ss_pred CcccHHHHcCC---CEEECCCCCHH-HHHHHHHhcCCeEEEEECCC-CCEEEEEEHHHhcC
Confidence 56789999964 67899999998 99999999999999999864 89999999999863
No 95
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.19 E-value=1.3e-06 Score=69.29 Aligned_cols=57 Identities=11% Similarity=0.174 Sum_probs=51.2
Q ss_pred cccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 203 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 203 ~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
+.+++++|++ ++.+++++ ++. ++++.|.+++.+++||++++ |+++|+|+.+|+++..
T Consensus 70 ~~~v~~~m~~--~~~~v~~~-~l~-~a~~~m~~~~~~~l~Vvd~~-g~~~Giit~~dll~~~ 126 (141)
T 2rih_A 70 DGPAMPIANS--PITVLDTD-PVH-VAAEKMRRHNIRHVVVVNKN-GELVGVLSIRDLCFER 126 (141)
T ss_dssp TSBSGGGCBC--CCEEETTS-BHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHSCH
T ss_pred CCCHHHHcCC--CCeEEcCC-CHH-HHHHHHHHcCCeEEEEEcCC-CcEEEEEEHHHHHHHH
Confidence 5789999986 77899999 998 99999999999999999854 8999999999998753
No 96
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.19 E-value=9.8e-07 Score=71.16 Aligned_cols=60 Identities=15% Similarity=0.289 Sum_probs=52.4
Q ss_pred ccccccccccc----ceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 203 EKTASDAMTPI----AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 203 ~~~V~diMtpr----~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
+.+++++|.++ .++.++++++++. ++++.|.+++.+++||++++ |+++|+|+.+|+++..
T Consensus 86 ~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 86 DVSVTKALQHRSHYFEGVLKCYLHETLE-TIINRLVEAEVHRLVVVDEN-DVVKGIVSLSDILQAL 149 (152)
T ss_dssp TSBGGGGGGTCCHHHHTCSEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred cchHHHHHhhhhcccCCCeEECCCCcHH-HHHHHHHHcCCeEEEEECCC-CeEEEEEEHHHHHHHH
Confidence 56799999754 4678999999998 99999999999999999864 8999999999998653
No 97
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.19 E-value=1.5e-06 Score=68.20 Aligned_cols=58 Identities=14% Similarity=0.201 Sum_probs=51.1
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
.+.+++++|. ++.++++++++. ++++.|.+++.+++||++++ |+++|+|+.+|+++..
T Consensus 70 ~~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~~vGivt~~dil~~l 127 (130)
T 3i8n_A 70 GQKQLGAVMR---PIQVVLNNTALP-KVFDQMMTHRLQLALVVDEY-GTVLGLVTLEDIFEHL 127 (130)
T ss_dssp TTSBHHHHSE---ECCEEETTSCHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred CcCCHHHHhc---CCcCcCCCCcHH-HHHHHHHHcCCeEEEEEcCC-CCEEEEEEHHHHHHHH
Confidence 3678999995 467899999998 99999999999999999864 8999999999998653
No 98
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.18 E-value=1.1e-06 Score=70.60 Aligned_cols=57 Identities=19% Similarity=0.298 Sum_probs=51.2
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcc
Q 022005 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLT 262 (304)
Q Consensus 201 l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~ 262 (304)
..+.+++++|++ ++.++++++++. ++++.|.+++++++||+++ ++++|+|+.+|+++
T Consensus 92 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~--~~~~Giit~~dil~ 148 (149)
T 3k2v_A 92 MRDASIADVMTR--GGIRIRPGTLAV-DALNLMQSRHITCVLVADG--DHLLGVVHMHDLLR 148 (149)
T ss_dssp CTTCBHHHHSEE--SCCEECTTCBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHTC
T ss_pred cccCcHHHHcCC--CCeEECCCCCHH-HHHHHHHHcCCCEEEEecC--CEEEEEEEHHHhhc
Confidence 457789999986 567899999998 9999999999999999986 39999999999975
No 99
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.13 E-value=2.5e-06 Score=68.29 Aligned_cols=58 Identities=10% Similarity=0.276 Sum_probs=50.9
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 201 l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
..+.+|+++|++ ++.++++++++. ++++.+.++++ +||++++ |+++|+|+.+|+++..
T Consensus 84 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~--l~Vvd~~-g~~~Giit~~dil~~l 141 (150)
T 3lqn_A 84 LEEMKVEQVMKQ--DIPVLKLEDSFA-KALEMTIDHPF--ICAVNED-GYFEGILTRRAILKLL 141 (150)
T ss_dssp GGGCBGGGTCBS--SCCEEETTCBHH-HHHHHHHHCSE--EEEECTT-CBEEEEEEHHHHHHHH
T ss_pred HhcCCHHHHhcC--CCceeCCCCCHH-HHHHHHHhCCE--EEEECCC-CcEEEEEEHHHHHHHH
Confidence 356789999985 678899999998 99999999887 9999864 8999999999998754
No 100
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.13 E-value=1.2e-06 Score=68.86 Aligned_cols=58 Identities=19% Similarity=0.159 Sum_probs=50.6
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
...+++++|. ++.++++++++. ++++.|.+++.+++||++++ |+++|+++.+|+++..
T Consensus 68 ~~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit~~Dil~~l 125 (130)
T 3hf7_A 68 TKEIMLRAAD---EIYFVPEGTPLS-TQLVKFQRNKKKVGLVVDEY-GDIQGLVTVEDILEEI 125 (130)
T ss_dssp CHHHHHHHSB---CCCEEETTCBHH-HHHHHHHHHCCCEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred chhhHHHhcc---CCeEeCCCCcHH-HHHHHHHhcCCeEEEEEcCC-CCEEEEeeHHHHHHHH
Confidence 3467899994 467899999998 99999999999999999864 8999999999998754
No 101
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.09 E-value=2.1e-06 Score=73.38 Aligned_cols=59 Identities=14% Similarity=0.227 Sum_probs=53.0
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
.+.+++++|++ +++++++++++. ++++.|.+++...+||+|++ |+++|+|+.+|++...
T Consensus 114 ~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVD~~-g~lvGiIT~~Dil~~i 172 (205)
T 3kxr_A 114 PHEPLISLLSE--DSRALTANTTLL-DAAEAIEHSREIELPVIDDA-GELIGRVTLRAATALV 172 (205)
T ss_dssp TTSBGGGGCCS--SCCCEETTSCHH-HHHHHHHTSSCSEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred CcchHHHHhcC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEcCC-CeEEEEEEHHHHHHHH
Confidence 56789999985 678899999998 99999999999999999864 8999999999998754
No 102
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.09 E-value=1.3e-06 Score=68.87 Aligned_cols=58 Identities=22% Similarity=0.368 Sum_probs=50.8
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcC-----CceeeeeeCCCCcEEEEEEechhccc
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKG-----HSRVPVYYEEPTNIIGLILVKNLLTI 263 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~-----~sr~PV~~~~~~~ivGiv~~kDll~~ 263 (304)
.+.+++++|++ ++.++++++++. ++++.+.+++ ++++||++++ |+++|+++.+|+++.
T Consensus 71 ~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dll~~ 133 (138)
T 2p9m_A 71 LETTIGDVMTK--DVITIHEDASIL-EAIKKMDISGKKEEIINQLPVVDKN-NKLVGIISDGDIIRT 133 (138)
T ss_dssp SSCBHHHHSCS--SCCCEETTSBHH-HHHHHHTCC-----CCCEEEEECTT-SBEEEEEEHHHHHHH
T ss_pred CCcCHHHHhCC--CcEEECCCCCHH-HHHHHHHhcCCccccccEEEEECCC-CeEEEEEEHHHHHHH
Confidence 46789999986 677899999998 9999999999 9999999854 899999999999864
No 103
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.09 E-value=1.9e-06 Score=70.16 Aligned_cols=58 Identities=19% Similarity=0.253 Sum_probs=52.5
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
.+.+++++|++ ++.++++++++. ++++.|.+++.+++||+++ |+++|+|+.+|+++..
T Consensus 76 ~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~lvGiit~~dil~~~ 133 (160)
T 2o16_A 76 FETPLFEVMHT--DVTSVAPQAGLK-ESAIYMQKHKIGCLPVVAK--DVLVGIITDSDFVTIA 133 (160)
T ss_dssp CCCBHHHHSCS--CEEEBCTTSBHH-HHHHHHHHTTCSCEEEEET--TEEEEEECHHHHHHHH
T ss_pred cccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhCCCEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 56789999986 788999999998 9999999999999999985 8999999999998753
No 104
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.06 E-value=1e-06 Score=72.01 Aligned_cols=58 Identities=14% Similarity=0.289 Sum_probs=50.0
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 201 l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
+.+.+|+++|++ ++.++++++++. ++++.|.++++ +||++++ |+++|+|+.+|++++.
T Consensus 83 ~~~~~v~~im~~--~~~~v~~~~~l~-~~~~~m~~~~~--lpVVd~~-g~l~GiiT~~Dil~~~ 140 (156)
T 3k6e_A 83 MADTDIVHMTKT--DVAVVSPDFTIT-EVLHKLVDESF--LPVVDAE-GIFQGIITRKSILKAV 140 (156)
T ss_dssp HTTSBGGGTCBC--SCCCBCTTCCHH-HHHHHTTTSSE--EEEECTT-SBEEEEEEHHHHHHHH
T ss_pred ccccCHHHhhcC--CceecccccHHH-HHHHHHHHcCC--eEEEecC-CEEEEEEEHHHHHHHH
Confidence 356789999985 778899999998 99999987665 9999865 8999999999998754
No 105
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.03 E-value=5.2e-06 Score=65.40 Aligned_cols=58 Identities=21% Similarity=0.361 Sum_probs=51.9
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
.+.+++++|.+ ++.++++++++. ++++.|.+++++++ |++++ |+++|+++.+|+++..
T Consensus 70 ~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~l-Vvd~~-g~~~Giit~~dil~~~ 127 (138)
T 2yzi_A 70 YDIPVERIMTR--NLITANVNTPLG-EVLRKMAEHRIKHI-LIEEE-GKIVGIFTLSDLLEAS 127 (138)
T ss_dssp TTSBGGGTCBC--SCCEEETTSBHH-HHHHHHHHHTCSEE-EEEET-TEEEEEEEHHHHHHHH
T ss_pred ccCCHHHHhhC--CCeEECCCCcHH-HHHHHHHhcCCCEE-EECCC-CCEEEEEEHHHHHHHH
Confidence 46789999986 677899999998 99999999999999 99864 8999999999998754
No 106
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.01 E-value=4e-06 Score=67.57 Aligned_cols=58 Identities=16% Similarity=0.236 Sum_probs=51.1
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 201 l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
..+.+++++|++ ++.++++++++. ++++.|.++++ +||++++ |+++|+|+.+|+++..
T Consensus 80 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~--l~Vvd~~-g~~~Giit~~dil~~~ 137 (157)
T 2emq_A 80 LETMKVEEVMNR--NIPRLRLDDSLM-KAVGLIVNHPF--VCVENDD-GYFAGIFTRREVLKQL 137 (157)
T ss_dssp GGTCBGGGTCBC--CCCEEETTSBHH-HHHHHHHHSSE--EEEECSS-SSEEEEEEHHHHHHHH
T ss_pred hcCCcHHHHhCC--CCceecCCCcHH-HHHHHHhhCCE--EEEEcCC-CeEEEEEEHHHHHHHH
Confidence 356789999986 778999999998 99999999988 9999864 8999999999998754
No 107
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.98 E-value=4.6e-06 Score=69.04 Aligned_cols=59 Identities=12% Similarity=0.202 Sum_probs=52.6
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 201 l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
..+.+++++|++ ++.++++++++. ++++.|.+++++++||++ + |+++|+|+.+|+++..
T Consensus 105 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~l~Vvd-~-g~~vGiit~~dll~~l 163 (185)
T 2j9l_A 105 PPTLKLRNILDL--SPFTVTDLTPME-IVVDIFRKLGLRQCLVTH-N-GRLLGIITKKDVLKHI 163 (185)
T ss_dssp CCCEECGGGEES--SCCEEETTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHH
T ss_pred ccCccHHHhhCc--CCeEeCCCCCHH-HHHHHHHhCCCcEEEEEE-C-CEEEEEEEHHHHHHHH
Confidence 456789999986 677899999998 999999999999999998 3 8999999999998754
No 108
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=97.95 E-value=4.2e-06 Score=67.83 Aligned_cols=58 Identities=19% Similarity=0.269 Sum_probs=50.7
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 201 l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
..+.+|+++|.+ ++.++++++++. ++++.+.++++ +||++++ |+++|+|+.+|+++..
T Consensus 83 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~--lpVvd~~-g~~vGiit~~dil~~~ 140 (159)
T 1yav_A 83 LDQITVEEVMLT--DIPRLHINDPIM-KGFGMVINNGF--VCVENDE-QVFEGIFTRRVVLKEL 140 (159)
T ss_dssp TTTSBHHHHSBC--SCCEEETTSBHH-HHHHHTTTCSE--EEEECTT-CBEEEEEEHHHHHHHH
T ss_pred hccCCHHHhcCC--CCceEcCCCCHH-HHHHHHHhCCE--EEEEeCC-CeEEEEEEHHHHHHHH
Confidence 457789999986 677899999998 99999998877 9999864 8999999999998753
No 109
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=97.93 E-value=3.2e-06 Score=68.27 Aligned_cols=57 Identities=14% Similarity=0.260 Sum_probs=49.7
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
.+.+|+++|++ ++.++++++++. ++++.+.+++ ++||++++ |+++|+|+.+|+++..
T Consensus 84 ~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~--~lpVvd~~-g~~~Giit~~dil~~l 140 (156)
T 3ctu_A 84 ADTDIVHMTKT--DVAVVSPDFTIT-EVLHKLVDES--FLPVVDAE-GIFQGIITRKSILKAV 140 (156)
T ss_dssp TTSBGGGGCBC--SCCCBCSSCCHH-HHHHHTTTSS--EEEEECTT-SBEEEEEETTHHHHHH
T ss_pred ccCcHHHhccC--CceeeCCCCcHH-HHHHHHHHcC--eEEEEcCC-CeEEEEEEHHHHHHHH
Confidence 36789999985 677899999998 9999998876 69999854 8999999999998764
No 110
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.90 E-value=6.2e-06 Score=73.60 Aligned_cols=60 Identities=18% Similarity=0.429 Sum_probs=53.4
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP 265 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~ 265 (304)
.+.+++++|++ +++++++++++. ++++.|.+++.+.+||++++ |+++|+|+..|++....
T Consensus 197 ~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 197 PRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp TTCBSTTTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHC-
T ss_pred CCCcHHHHhCC--CCeEEeCCCCHH-HHHHHHHhcCCCEEEEEeCC-CeEEEEEEHHHHHHHHH
Confidence 56789999975 678899999998 99999999999999999865 89999999999988654
No 111
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.85 E-value=6.2e-06 Score=79.99 Aligned_cols=62 Identities=24% Similarity=0.355 Sum_probs=0.0
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP 265 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~ 265 (304)
.+.+|+|+|+|+.+++++++++++. ++++.|.+++.+++||+|++ ++++|+|+.+|+++...
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~~ 220 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLS-EANKIIWEKKLNALPIIDDD-QHLRYIVFRKDYDRSQV 220 (503)
T ss_dssp ----------------------------------------------------------------
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEecHHHHhhh
Confidence 4568999999876799999999999 99999999999999999865 89999999999988653
No 112
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=97.84 E-value=1.3e-05 Score=79.98 Aligned_cols=57 Identities=9% Similarity=0.031 Sum_probs=49.6
Q ss_pred cccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCCc
Q 022005 205 TASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE 266 (304)
Q Consensus 205 ~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~ 266 (304)
+++|+|++ +++++++|+++. |+.+.|.+++.+++||+| + |+++|+|+.+|+++...+
T Consensus 569 ~v~~iMt~--~pitV~~~~~l~-ea~~~M~~~~i~~lpVve-~-G~lvGIVT~~Dll~~~~~ 625 (632)
T 3org_A 569 SLVVPCDV--SPIVVTSYSLVR-QLHFLFVMLMPSMIYVTE-R-GKLVGIVEREDVAYGYSN 625 (632)
T ss_dssp --CCSCCC--CCCEEETTCBHH-HHHHHHHHTCCSEEEEEE-T-TEEEEEEEGGGTEECCCC
T ss_pred ccchhhcC--CCceecCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEehhhHHHHHhh
Confidence 48999986 678999999998 999999999999999994 4 899999999999987643
No 113
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.81 E-value=9.6e-06 Score=72.81 Aligned_cols=59 Identities=12% Similarity=0.354 Sum_probs=53.0
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
.+.+|+++|++ +++++++++++. ++.+.|.+++.+++||++++ |+++|+|+.+|++...
T Consensus 199 ~~~~v~~im~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIT~~Dil~~i 257 (286)
T 2oux_A 199 DDTLIADILNE--RVISVHVGDDQE-DVAQTIRDYDFLAVPVTDYD-DHLLGIVTVDDIIDVI 257 (286)
T ss_dssp TTSBHHHHSBS--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred CCCcHHHHcCC--CCeeecCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHH
Confidence 56789999985 678899999998 99999999999999999864 8999999999998754
No 114
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=97.79 E-value=1e-05 Score=65.49 Aligned_cols=60 Identities=12% Similarity=0.054 Sum_probs=51.2
Q ss_pred ccccccccccccc----eEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 202 TEKTASDAMTPIA----ETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 202 ~~~~V~diMtpr~----~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
.+.+++++|.+.. .+.++++++++. ++++.|.+++.+++||++ + |+++|+|+.+|+++..
T Consensus 82 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~l~Giit~~dil~~~ 145 (164)
T 2pfi_A 82 HQQCLQDILARGCPTEPVTLTLFSETTLH-QAQNLFKLLNLQSLFVTS-R-GRAVGCVSWVEMKKAI 145 (164)
T ss_dssp CCCBHHHHHHTTCCCBCCCCCEETTCBHH-HHHHHHHHTTCSEEEEEE-T-TEEEEEEEHHHHHHHH
T ss_pred ccchhhhhhcccccccCCceEECCCCcHH-HHHHHHHHhCCCEEEEEE-C-CEEEEEEEHHHHHHHH
Confidence 3567999998631 167899999998 999999999999999998 3 8999999999998754
No 115
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.74 E-value=2e-05 Score=65.33 Aligned_cols=57 Identities=14% Similarity=0.109 Sum_probs=49.0
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
.+.+++ +|. ++.++++++++. ++++.|.+++..++||++++ |+++|+|+.+|+++..
T Consensus 99 ~~~~v~-~~~---~~~~v~~~~~l~-~al~~m~~~~~~~~~Vvde~-g~lvGiIT~~Dil~~l 155 (173)
T 3ocm_A 99 GRVRRN-RLR---DPIIVHESIGIL-RLMDTLKRSRGQLVLVADEF-GAIEGLVTPIDVFEAI 155 (173)
T ss_dssp SSCCGG-GSB---CCCEECGGGCHH-HHHHHHHHSTTCCEEEECTT-CCEEEEECHHHHHHHH
T ss_pred CcchhH-hcC---CCeEECCCCcHH-HHHHHHHHcCCeEEEEEeCC-CCEEEEEeHHHHHHHH
Confidence 456788 553 567899999998 99999999999999999864 8999999999998754
No 116
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.66 E-value=2.6e-05 Score=75.06 Aligned_cols=59 Identities=19% Similarity=0.439 Sum_probs=53.4
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
.+.+++|+|++ ++++++++++++ ++.+.|.+++...+||+|++ |+++|+|+.+|+++..
T Consensus 217 ~~~~v~dim~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVDe~-g~lvGiIT~~Dil~~i 275 (473)
T 2zy9_A 217 PRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVL 275 (473)
T ss_dssp TTSBGGGTSBS--SCCCEESSSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred CCCcHHHHhCC--CCeEEeCCCcHH-HHHHHHHhcCCcEEEEEcCC-CEEEEEEehHhhHHHH
Confidence 57789999985 678999999998 99999999999999999865 8999999999998754
No 117
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.66 E-value=6.5e-06 Score=79.59 Aligned_cols=61 Identities=18% Similarity=0.251 Sum_probs=0.0
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
.+.+|+|+|+|+.+++++++++++. ++.+.|.+++...+||+|++ ++++|+|+.+|+++..
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLE-EMKAKLYENRIEKMLVVDEN-FYLRGLVTFRDIEKAK 205 (490)
T ss_dssp ---------------------------------------------------------------
T ss_pred cCCcHHHHhccCCCCEEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEehHHhhhhc
Confidence 4568999999877789999999999 99999999999999999865 8999999999998753
No 118
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.62 E-value=2.6e-05 Score=75.68 Aligned_cols=61 Identities=18% Similarity=0.260 Sum_probs=54.7
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 201 l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
-.+.+|+|+|++ .+++++++++++. ++++.+.+++..++||+|++ ++++|+|+.+|+++..
T Consensus 172 ~~~~~V~~vM~~-~~~vtv~~~~~l~-eal~~m~~~~i~~lpVVDe~-g~l~GiIT~~Dil~~~ 232 (511)
T 3usb_A 172 DYSIKISDVMTK-EQLITAPVGTTLS-EAEKILQKYKIEKLPLVDNN-GVLQGLITIKDIEKVI 232 (511)
T ss_dssp CSSSBHHHHCCC-CCCCCEETTCCHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred cCCCcHHHhccc-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEeCC-CCEeeeccHHHHHHhh
Confidence 356789999996 6788999999998 99999999999999999865 8999999999998753
No 119
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.61 E-value=8.7e-06 Score=78.82 Aligned_cols=61 Identities=18% Similarity=0.232 Sum_probs=44.3
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
.+.+++|+|+|+.+++++++++++. ++.+.+.+++..++||+|++ |+++|+|+.+|+++..
T Consensus 147 ~~~~v~diM~p~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe~-G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 147 LTKSVAAVMTPKERLATVKEGATGA-EVQEKMHKARVEKILVVNDE-FQLKGMITAKDFHKAE 207 (496)
T ss_dssp TTSBGGGTSEEGGGCCEEECC-----CGGGTCC---CCCEEEECTT-SBCCEEECCC-----C
T ss_pred CCCcHHHHhcCCCCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CCEEEeehHhHHHHhh
Confidence 4678999999877789999999998 99999999999999999875 8999999999998753
No 120
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.41 E-value=2e-05 Score=76.23 Aligned_cols=61 Identities=18% Similarity=0.419 Sum_probs=3.5
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
.+.+++|+|+|+.+++++++++++. ++++.+.+++..++||+|++ ++++|+++.+|+++..
T Consensus 153 ~~~~v~~im~~~~~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIt~~Dll~~~ 213 (494)
T 1vrd_A 153 LSKKIKDLMTPREKLIVAPPDISLE-KAKEILHQHRIEKLPLVSKD-NKLVGLITIKDIMSVI 213 (494)
T ss_dssp ----------------------------------------------------------CHHHH
T ss_pred CCCcHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHhhh
Confidence 3568999999877889999999999 99999999999999999865 8999999999998753
No 121
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=97.38 E-value=0.00014 Score=63.99 Aligned_cols=52 Identities=13% Similarity=0.178 Sum_probs=47.2
Q ss_pred ccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 208 DAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 208 diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
.+|.| .++++.+++++. ++.++|...|..++||+++ |+++|||+.||++++.
T Consensus 193 ~~md~--sP~tv~~~tsL~-~v~~LF~~lglr~l~V~~~--GrLVGIVTrkDl~kai 244 (250)
T 2d4z_A 193 CRIDQ--SPFQLVEGTSLQ-KTHTLFSLLGLDRAYVTSM--GKLVGVVALAEIQAAI 244 (250)
T ss_dssp SCEEC--CSCCBCTTCBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHH
T ss_pred ccccC--CCeEECCCCcHH-HHHHHHHHhCCeEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 46886 788999999998 9999999999999999973 8999999999998864
No 122
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.30 E-value=4e-05 Score=74.46 Aligned_cols=61 Identities=16% Similarity=0.273 Sum_probs=42.6
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
.+.+++|+|+++.+++++++++++. ++.+.+.+++..++||+|++ ++++|+++.+|+++..
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLK-EANEILQRSKKGKLPIVNDC-DELVAIIARTDLKKNR 231 (514)
T ss_dssp ----------CCBCCCCEETTCCST-TTTTHHHHHTCSCCCEESSS-SCCC----CCCCSSCC
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCCcccEECCC-CeEEEEEEHHHHHHHh
Confidence 4568999999766888999999999 99999999999999999865 8999999999998764
No 123
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.29 E-value=3.7e-05 Score=74.04 Aligned_cols=58 Identities=19% Similarity=0.300 Sum_probs=0.0
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhccc
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 263 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~ 263 (304)
.+.+|+|+||+ ++++++.+.+++ ++.+.+.+++..++||+|++ ++++|+|+.+|+.+.
T Consensus 198 ~~~~V~evMT~--~lvt~~~~~~le-eA~~iL~~~kieklpVVd~~-g~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 198 AETPIKSVMTT--EVVTGSSPITLE-KANSLLRETKKGKLPIVDSN-GHLVSLVARSDLLKN 255 (556)
T ss_dssp --------------------------------------------------------------
T ss_pred cceEhhhhccc--ceEEecCCCCHH-HHHHHHHHccccceeEEccC-CcEEEEEEechhhhh
Confidence 35689999997 699999999998 99999999999999999875 899999999999864
No 124
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.14 E-value=0.00029 Score=67.91 Aligned_cols=60 Identities=17% Similarity=0.308 Sum_probs=53.1
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (304)
.+.+++|+|++ .+++++++++++. ++++.+.+++..++||+|++ ++++|+++.+|+++..
T Consensus 150 ~~~~v~~im~~-~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVd~~-g~lvGivt~~Dil~~~ 209 (491)
T 1zfj_A 150 YNAPISEHMTS-EHLVTAAVGTDLE-TAERILHEHRIEKLPLVDNS-GRLSGLITIKDIEKVI 209 (491)
T ss_dssp SSSBTTTSCCC-SCCCCEETTCCHH-HHHHHHHHTTCSEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred CCCcHHHHcCC-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEEHHHHHHHH
Confidence 56789999985 2677899999998 99999999999999999865 8999999999998753
No 125
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.00 E-value=0.00038 Score=67.72 Aligned_cols=70 Identities=13% Similarity=0.159 Sum_probs=54.4
Q ss_pred HHHHHhhhh---ccccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCC---CCcEEEEEEechhcccC
Q 022005 191 ETTIIAGAL---ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEE---PTNIIGLILVKNLLTIH 264 (304)
Q Consensus 191 e~~~i~~~l---~l~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~---~~~ivGiv~~kDll~~~ 264 (304)
++++++... ...+.+|+++|++ +++++++++++. ++.+.|.++++ .||++++ .++++|+|+.+|+++..
T Consensus 435 ~~Dll~~l~~~~~~~~~~V~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l 509 (527)
T 3pc3_A 435 QETLITQIVSMNRQQSDPAIKALNK--RVIRLNESEILG-KLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFI 509 (527)
T ss_dssp HHHHHHHHHHHCCCTTSBGGGGEET--TCCEEETTSBHH-HHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHH
T ss_pred HHHHHHHHHhccCcCCCcHHHHhcC--CCeEECCCCcHH-HHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHH
Confidence 445554443 2346789999985 778999999998 99999966654 6999874 37999999999999865
Q ss_pred C
Q 022005 265 P 265 (304)
Q Consensus 265 ~ 265 (304)
.
T Consensus 510 ~ 510 (527)
T 3pc3_A 510 A 510 (527)
T ss_dssp H
T ss_pred H
Confidence 3
No 126
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.90 E-value=0.00014 Score=70.05 Aligned_cols=60 Identities=23% Similarity=0.444 Sum_probs=0.4
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcccCC
Q 022005 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP 265 (304)
Q Consensus 202 ~~~~V~diMtpr~~v~~l~~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~ 265 (304)
.+.+++++|++ +++++++++++. ++++.|.+++.+.+||++++ ++++|+++.+|+++...
T Consensus 148 ~~~~v~~im~~--~~~~v~~~~~l~-eal~~m~~~~~~~lpVVde~-g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 148 EGKLVKELMTK--EVITVPESIEVE-EALKIMIENRIDRLPVVDER-GKLVGLITMSDLVARKK 207 (486)
T ss_dssp ---------------------------------------------------------------C
T ss_pred CCCCHHHHccC--CCeEECCcCcHH-HHHHHHHHcCCCEEEEEecC-CeEEEEEEHHHHHHhhh
Confidence 35689999986 678999999998 99999999999999999865 89999999999988653
No 127
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=50.42 E-value=20 Score=21.04 Aligned_cols=25 Identities=8% Similarity=0.341 Sum_probs=17.4
Q ss_pred ccccChH-HHHHHHHHHHHHHHHHHH
Q 022005 5 YSCCGMG-FIIHIVVIVFLVMFAGLM 29 (304)
Q Consensus 5 ~~~~~~~-~~~~~~~~~~ll~lsa~f 29 (304)
+|-+-.+ +|..++++++.+++|.+|
T Consensus 10 VELNRTSLy~GLLlifvlavlFssyf 35 (37)
T 3arc_L 10 VELNRTSLYLGLLLILVLALLFSSYF 35 (37)
T ss_dssp BCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceechhhHHHHHHHHHHHHHHhhhhc
Confidence 4555566 577777777777777776
No 128
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=30.80 E-value=29 Score=26.07 Aligned_cols=21 Identities=19% Similarity=0.392 Sum_probs=15.9
Q ss_pred eeeeeCCCCcEEEEEEechhcc
Q 022005 241 VPVYYEEPTNIIGLILVKNLLT 262 (304)
Q Consensus 241 ~PV~~~~~~~ivGiv~~kDll~ 262 (304)
.||++++ |+++|+|..+-.+.
T Consensus 106 ~PV~~~~-g~viGvv~vg~~l~ 126 (131)
T 1p0z_A 106 SPIQDAT-GKVIGIVSVGYTIE 126 (131)
T ss_dssp EEEECTT-CCEEEEEEEEEEGG
T ss_pred EeEECCC-CCEEEEEEEEEEhH
Confidence 4998743 89999999875543
No 129
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=28.65 E-value=91 Score=20.23 Aligned_cols=36 Identities=19% Similarity=0.068 Sum_probs=25.8
Q ss_pred CCCCccHHHHHHHHhcCCceeeeeeCCCCcEEEEEEec
Q 022005 221 INAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVK 258 (304)
Q Consensus 221 ~~~t~~~e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~k 258 (304)
..+|++ |++.+|...||+-+.=.+.+ ..=+-+|+.+
T Consensus 11 kpmsve-EAv~qmel~gh~F~vF~n~~-t~~~nVvYrR 46 (57)
T 3k2t_A 11 KPMDSE-EAVLQMNLLGHSFYVYTDAE-TNGTNIVYSR 46 (57)
T ss_dssp CCBCHH-HHHHHHHHHTCSEEEEEBSS-SCCEEEEEEC
T ss_pred CCCCHH-HHHHHHHhCCCcEEEEEcCC-CCCEEEEEEe
Confidence 347888 99999999999988655544 3455666654
No 130
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=28.52 E-value=32 Score=26.28 Aligned_cols=20 Identities=30% Similarity=0.526 Sum_probs=15.4
Q ss_pred eeeeeCCCCcEEEEEEechhc
Q 022005 241 VPVYYEEPTNIIGLILVKNLL 261 (304)
Q Consensus 241 ~PV~~~~~~~ivGiv~~kDll 261 (304)
.||+++ .|+++|+|..+--+
T Consensus 111 ~PV~~~-~g~viGvv~vg~~~ 130 (142)
T 3by8_A 111 TPIYDE-NHKQIGVVAIGLEL 130 (142)
T ss_dssp EEEECT-TSCEEEEEEEEEEH
T ss_pred EeEEcC-CCCEEEEEEEeEEH
Confidence 499864 38999999986544
No 131
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=27.54 E-value=75 Score=25.00 Aligned_cols=33 Identities=15% Similarity=0.421 Sum_probs=26.0
Q ss_pred HHHHHHHhcCCceeeeeeCCCCcEEEEEEechhcc
Q 022005 228 ELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLT 262 (304)
Q Consensus 228 e~~~~~~~~~~sr~PV~~~~~~~ivGiv~~kDll~ 262 (304)
+..+.+.+.|.+-+-|..+ ++++|++..+|-++
T Consensus 123 ~~~~~la~~G~T~v~VA~d--~~l~GvIalaD~iK 155 (156)
T 1svj_A 123 QKVDQVARQGATPLVVVEG--SRVLGVIALKDIVK 155 (156)
T ss_dssp HHHHHHHHTTCEEEEEEET--TEEEEEEEEEECCC
T ss_pred HHHHHHHhCCCCEEEEEEC--CEEEEEEEEecCCC
Confidence 4566677889888777763 79999999999764
No 132
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=23.76 E-value=48 Score=25.56 Aligned_cols=23 Identities=13% Similarity=0.260 Sum_probs=16.1
Q ss_pred CceeeeeeCCCCcEEEEE-Eechhc
Q 022005 238 HSRVPVYYEEPTNIIGLI-LVKNLL 261 (304)
Q Consensus 238 ~sr~PV~~~~~~~ivGiv-~~kDll 261 (304)
.+.+||++++ |+++|++ ..+|+-
T Consensus 108 v~~~Pi~d~~-G~~~G~vev~~Dit 131 (151)
T 2qkp_A 108 VTYAAVRDQA-GDFQGVLEYVQDIK 131 (151)
T ss_dssp EEEEEEECTT-CCEEEEEEEEEECG
T ss_pred EEEEEEECCC-CCEEEEEEEEEECH
Confidence 4567999754 8999988 455553
Done!