Query 022007
Match_columns 304
No_of_seqs 233 out of 2230
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 12:36:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022007.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022007hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kc2_A Uncharacterized protein 100.0 1.7E-39 5.8E-44 293.0 22.7 273 23-303 11-348 (352)
2 3epr_A Hydrolase, haloacid deh 100.0 3.8E-37 1.3E-41 268.3 25.5 249 24-299 4-254 (264)
3 2oyc_A PLP phosphatase, pyrido 100.0 3.6E-37 1.2E-41 274.2 25.9 280 11-303 7-297 (306)
4 1zjj_A Hypothetical protein PH 100.0 5.1E-37 1.7E-41 267.4 24.6 258 25-303 1-261 (263)
5 3qgm_A P-nitrophenyl phosphata 100.0 8.1E-37 2.8E-41 266.4 25.7 258 22-303 5-267 (268)
6 2hx1_A Predicted sugar phospha 100.0 6.3E-37 2.1E-41 269.6 20.9 269 15-298 4-283 (284)
7 3pdw_A Uncharacterized hydrola 100.0 3.4E-36 1.2E-40 262.3 23.8 253 23-302 4-258 (266)
8 1vjr_A 4-nitrophenylphosphatas 100.0 7.6E-34 2.6E-38 247.9 26.9 257 20-303 12-271 (271)
9 1yv9_A Hydrolase, haloacid deh 100.0 9.4E-34 3.2E-38 246.5 26.6 250 23-299 3-255 (264)
10 2ho4_A Haloacid dehalogenase-l 100.0 8.2E-31 2.8E-35 226.6 23.5 249 22-303 4-255 (259)
11 2c4n_A Protein NAGD; nucleotid 100.0 1.5E-28 5.1E-33 210.0 27.6 245 24-299 2-248 (250)
12 2x4d_A HLHPP, phospholysine ph 100.0 1.4E-27 4.8E-32 207.0 25.0 252 20-303 7-266 (271)
13 3l8h_A Putative haloacid dehal 99.9 3.2E-21 1.1E-25 157.5 13.2 81 220-303 96-176 (179)
14 2gmw_A D,D-heptose 1,7-bisphos 99.9 4.9E-21 1.7E-25 161.0 12.6 79 219-303 125-204 (211)
15 3ib6_A Uncharacterized protein 99.8 1.6E-20 5.6E-25 155.0 14.3 78 222-303 94-175 (189)
16 2oda_A Hypothetical protein ps 99.8 8E-20 2.7E-24 151.8 12.3 77 222-303 84-184 (196)
17 3vay_A HAD-superfamily hydrola 99.8 1.1E-20 3.7E-25 159.6 5.9 123 166-304 106-228 (230)
18 2o2x_A Hypothetical protein; s 99.8 1.7E-20 5.7E-25 158.4 5.2 78 220-303 132-210 (218)
19 3qxg_A Inorganic pyrophosphata 99.8 1.7E-20 5.8E-25 160.2 3.8 126 167-303 111-239 (243)
20 3dv9_A Beta-phosphoglucomutase 99.8 2.1E-20 7.1E-25 159.4 2.6 127 166-303 109-238 (247)
21 4g9b_A Beta-PGM, beta-phosphog 99.8 3.4E-20 1.2E-24 159.0 1.8 124 167-302 97-221 (243)
22 3umb_A Dehalogenase-like hydro 99.8 5E-18 1.7E-22 143.4 15.0 79 220-304 150-228 (233)
23 3l5k_A Protein GS1, haloacid d 99.8 7.4E-20 2.5E-24 156.9 1.9 127 166-303 113-244 (250)
24 3mc1_A Predicted phosphatase, 99.8 8E-21 2.7E-25 160.0 -4.4 129 166-304 87-216 (226)
25 3um9_A Haloacid dehalogenase, 99.8 9.6E-18 3.3E-22 141.3 14.4 78 221-304 148-225 (230)
26 3kbb_A Phosphorylated carbohyd 99.8 3.7E-20 1.3E-24 155.3 -1.4 126 167-303 86-213 (216)
27 4ex6_A ALNB; modified rossman 99.8 2.5E-20 8.5E-25 158.2 -2.8 127 167-303 106-233 (237)
28 3iru_A Phoshonoacetaldehyde hy 99.7 3.6E-20 1.2E-24 160.6 -2.3 127 167-303 113-265 (277)
29 3s6j_A Hydrolase, haloacid deh 99.7 1E-19 3.5E-24 153.6 0.4 127 167-303 93-220 (233)
30 2no4_A (S)-2-haloacid dehaloge 99.7 3.5E-17 1.2E-21 139.2 15.8 76 221-303 157-233 (240)
31 3ed5_A YFNB; APC60080, bacillu 99.7 1.1E-19 3.7E-24 154.0 -0.7 128 166-304 104-232 (238)
32 1yns_A E-1 enzyme; hydrolase f 99.7 2E-19 6.7E-24 156.1 0.9 125 165-298 130-255 (261)
33 4eek_A Beta-phosphoglucomutase 99.7 8E-19 2.7E-23 151.2 3.3 127 167-303 112-245 (259)
34 1zrn_A L-2-haloacid dehalogena 99.7 4E-17 1.4E-21 137.9 13.8 77 221-303 147-223 (232)
35 3umc_A Haloacid dehalogenase; 99.7 5.7E-20 1.9E-24 157.5 -4.9 127 166-303 121-251 (254)
36 3m9l_A Hydrolase, haloacid deh 99.7 2.9E-17 9.9E-22 136.5 11.3 73 222-303 124-196 (205)
37 2pib_A Phosphorylated carbohyd 99.7 1.9E-19 6.6E-24 149.7 -2.0 125 167-303 86-213 (216)
38 3u26_A PF00702 domain protein; 99.7 3.9E-19 1.3E-23 150.2 -0.9 126 167-303 102-227 (234)
39 3qnm_A Haloacid dehalogenase-l 99.7 2.5E-18 8.6E-23 145.5 3.1 125 166-303 108-233 (240)
40 3kzx_A HAD-superfamily hydrola 99.7 1.3E-17 4.6E-22 140.8 7.2 120 167-303 105-226 (231)
41 2hcf_A Hydrolase, haloacid deh 99.7 1.9E-18 6.4E-23 146.0 1.3 128 167-303 95-226 (234)
42 3umg_A Haloacid dehalogenase; 99.7 2.7E-19 9.1E-24 152.9 -4.1 127 166-303 117-247 (254)
43 2w43_A Hypothetical 2-haloalka 99.7 3.1E-16 1.1E-20 129.8 13.6 76 220-303 123-198 (201)
44 3smv_A S-(-)-azetidine-2-carbo 99.7 7.3E-20 2.5E-24 154.9 -8.9 127 166-303 100-235 (240)
45 2hi0_A Putative phosphoglycola 99.7 1.5E-16 5E-21 135.7 11.6 77 222-303 162-238 (240)
46 3dnp_A Stress response protein 99.7 1.7E-15 5.9E-20 132.7 18.1 74 219-302 195-270 (290)
47 2pr7_A Haloacid dehalogenase/e 99.7 2.3E-17 7.8E-22 128.0 5.3 51 223-274 72-122 (137)
48 3k1z_A Haloacid dehalogenase-l 99.7 1.7E-18 5.8E-23 150.0 -1.3 128 166-303 107-236 (263)
49 3ddh_A Putative haloacid dehal 99.7 1.1E-17 3.7E-22 140.7 3.5 123 166-303 106-234 (234)
50 2ah5_A COG0546: predicted phos 99.7 5.1E-18 1.7E-22 142.0 1.2 123 167-302 86-209 (210)
51 4dw8_A Haloacid dehalogenase-l 99.7 1.5E-15 5E-20 132.4 15.3 68 220-297 191-258 (279)
52 3fzq_A Putative hydrolase; YP_ 99.7 4.7E-16 1.6E-20 135.0 11.1 68 220-297 194-261 (274)
53 2nyv_A Pgpase, PGP, phosphogly 99.6 3.1E-15 1.1E-19 126.0 14.9 74 222-303 136-209 (222)
54 3dao_A Putative phosphatse; st 99.6 5.2E-16 1.8E-20 135.9 9.4 75 219-303 204-280 (283)
55 3nas_A Beta-PGM, beta-phosphog 99.6 1.5E-17 5.1E-22 140.6 -0.7 115 167-299 94-209 (233)
56 1swv_A Phosphonoacetaldehyde h 99.6 5.2E-17 1.8E-21 140.3 2.5 127 167-303 105-257 (267)
57 2pke_A Haloacid delahogenase-l 99.6 7.2E-16 2.5E-20 132.0 9.5 121 167-303 114-241 (251)
58 3nuq_A Protein SSM1, putative 99.6 2.1E-16 7.2E-21 137.9 6.0 128 166-303 143-279 (282)
59 3sd7_A Putative phosphatase; s 99.6 1.4E-15 4.9E-20 129.1 10.8 76 222-302 163-239 (240)
60 1wr8_A Phosphoglycolate phosph 99.6 4.2E-15 1.5E-19 126.2 13.6 209 25-302 3-221 (231)
61 2hoq_A Putative HAD-hydrolase 99.6 5.8E-15 2E-19 125.6 13.5 79 222-303 147-225 (241)
62 3mpo_A Predicted hydrolase of 99.6 6.3E-15 2.1E-19 128.4 13.7 67 221-297 192-258 (279)
63 3e58_A Putative beta-phosphogl 99.6 9.7E-15 3.3E-19 120.8 13.5 73 222-302 142-214 (214)
64 2wm8_A MDP-1, magnesium-depend 99.6 3.9E-15 1.3E-19 122.3 10.3 50 225-275 120-169 (187)
65 2hsz_A Novel predicted phospha 99.6 8.9E-15 3E-19 125.0 12.9 77 222-303 167-243 (243)
66 2fpr_A Histidine biosynthesis 99.6 6.5E-16 2.2E-20 125.9 5.4 53 221-274 112-164 (176)
67 4gib_A Beta-phosphoglucomutase 99.6 5.3E-16 1.8E-20 133.3 4.4 118 167-302 118-237 (250)
68 2gfh_A Haloacid dehalogenase-l 99.6 8.6E-16 2.9E-20 132.9 5.4 128 166-303 122-250 (260)
69 3l7y_A Putative uncharacterize 99.6 1.2E-14 4E-19 128.6 12.4 73 220-302 222-296 (304)
70 2p9j_A Hypothetical protein AQ 99.6 7.9E-15 2.7E-19 117.5 9.5 64 224-297 82-145 (162)
71 3n1u_A Hydrolase, HAD superfam 99.6 3.7E-15 1.3E-19 123.0 7.5 68 225-302 93-166 (191)
72 1qq5_A Protein (L-2-haloacid d 99.6 3.4E-14 1.2E-18 121.8 13.7 76 222-303 144-242 (253)
73 3r4c_A Hydrolase, haloacid deh 99.6 5.9E-15 2E-19 127.8 8.4 69 219-297 187-255 (268)
74 4dcc_A Putative haloacid dehal 99.6 1.3E-15 4.4E-20 128.7 3.7 111 167-279 114-226 (229)
75 3pgv_A Haloacid dehalogenase-l 99.6 6.1E-14 2.1E-18 122.8 14.5 68 220-297 203-272 (285)
76 1rlm_A Phosphatase; HAD family 99.6 5.9E-14 2E-18 122.0 14.2 69 219-297 184-252 (271)
77 2rbk_A Putative uncharacterize 99.5 1.2E-15 4E-20 132.0 3.3 75 219-303 180-256 (261)
78 2pq0_A Hypothetical conserved 99.5 2.4E-14 8.2E-19 123.4 10.9 68 220-297 177-244 (258)
79 2wf7_A Beta-PGM, beta-phosphog 99.5 6.9E-16 2.3E-20 128.9 -0.2 114 167-298 93-207 (221)
80 3e8m_A Acylneuraminate cytidyl 99.5 7.7E-15 2.6E-19 117.8 6.0 68 225-302 78-151 (164)
81 2hdo_A Phosphoglycolate phosph 99.5 1.1E-15 3.9E-20 127.0 1.0 125 167-303 85-209 (209)
82 2fdr_A Conserved hypothetical 99.5 3E-16 1E-20 131.9 -2.8 84 215-303 131-220 (229)
83 1k1e_A Deoxy-D-mannose-octulos 99.5 3.8E-14 1.3E-18 115.7 9.5 61 225-295 82-142 (180)
84 3d6j_A Putative haloacid dehal 99.5 1.3E-13 4.5E-18 114.9 12.9 76 223-303 143-218 (225)
85 2om6_A Probable phosphoserine 99.5 1.9E-15 6.6E-20 127.2 1.6 128 167-303 101-230 (235)
86 1qyi_A ZR25, hypothetical prot 99.5 3E-15 1E-19 136.0 2.4 130 164-303 214-374 (384)
87 3gyg_A NTD biosynthesis operon 99.5 4E-14 1.4E-18 124.1 8.7 229 24-302 21-279 (289)
88 1te2_A Putative phosphatase; s 99.5 2E-13 6.8E-18 113.9 12.4 74 222-301 147-220 (226)
89 2b82_A APHA, class B acid phos 99.5 3.9E-14 1.3E-18 118.7 7.6 99 167-277 90-192 (211)
90 2r8e_A 3-deoxy-D-manno-octulos 99.5 1.2E-13 4E-18 113.7 10.2 62 224-295 99-160 (188)
91 3n07_A 3-deoxy-D-manno-octulos 99.5 4.5E-14 1.5E-18 116.8 6.9 68 225-302 99-172 (195)
92 1rkq_A Hypothetical protein YI 99.5 5.5E-13 1.9E-17 116.6 13.1 72 221-302 193-266 (282)
93 1nrw_A Hypothetical protein, h 99.5 3.9E-12 1.3E-16 111.4 18.0 67 221-297 211-277 (288)
94 3mn1_A Probable YRBI family ph 99.5 1.8E-13 6.2E-18 112.6 8.8 68 225-302 93-166 (189)
95 3mmz_A Putative HAD family hyd 99.4 1.7E-13 5.7E-18 111.5 7.9 69 225-303 85-159 (176)
96 2zg6_A Putative uncharacterize 99.4 4.8E-15 1.6E-19 124.6 -1.7 119 166-303 96-215 (220)
97 1nf2_A Phosphatase; structural 99.4 6.5E-12 2.2E-16 108.9 17.9 73 221-303 185-259 (268)
98 3zvl_A Bifunctional polynucleo 99.4 3E-13 1E-17 124.8 9.2 50 221-270 149-218 (416)
99 2qlt_A (DL)-glycerol-3-phospha 99.4 9E-13 3.1E-17 114.6 11.4 72 222-299 167-245 (275)
100 1l6r_A Hypothetical protein TA 99.4 4.2E-13 1.4E-17 113.7 9.0 66 221-296 148-213 (227)
101 2go7_A Hydrolase, haloacid deh 99.4 6.3E-14 2.2E-18 115.1 2.0 119 167-304 87-206 (207)
102 3ewi_A N-acylneuraminate cytid 99.4 3E-12 1E-16 103.2 11.2 68 225-302 82-155 (168)
103 3m1y_A Phosphoserine phosphata 99.4 1.3E-12 4.6E-17 108.7 9.3 69 222-301 138-208 (217)
104 2b30_A Pvivax hypothetical pro 99.4 1.1E-11 3.7E-16 109.4 15.2 66 221-296 219-285 (301)
105 3kd3_A Phosphoserine phosphohy 99.4 2.8E-14 9.5E-19 118.6 -1.5 75 222-302 143-218 (219)
106 2zos_A MPGP, mannosyl-3-phosph 99.4 1.4E-12 4.8E-17 111.9 8.4 65 224-297 177-242 (249)
107 3ij5_A 3-deoxy-D-manno-octulos 99.3 2.1E-12 7.2E-17 108.1 8.8 68 225-302 123-196 (211)
108 3zx4_A MPGP, mannosyl-3-phosph 99.3 8.3E-12 2.9E-16 107.6 12.7 61 221-295 172-234 (259)
109 1nnl_A L-3-phosphoserine phosp 99.3 3.5E-12 1.2E-16 107.1 10.1 70 224-303 155-224 (225)
110 2b0c_A Putative phosphatase; a 99.3 2E-12 6.8E-17 106.8 6.3 104 166-274 92-196 (206)
111 4eze_A Haloacid dehalogenase-l 99.3 2.1E-12 7.1E-17 114.8 6.2 71 222-303 242-314 (317)
112 1xvi_A MPGP, YEDP, putative ma 99.3 1.3E-11 4.6E-16 107.4 10.3 56 24-82 8-66 (275)
113 3cnh_A Hydrolase family protei 99.3 4E-13 1.4E-17 110.6 -0.7 107 166-278 87-193 (200)
114 2g80_A Protein UTR4; YEL038W, 99.3 2.3E-11 8E-16 104.6 10.3 67 224-298 186-253 (253)
115 2p11_A Hypothetical protein; p 99.2 1.8E-12 6.2E-17 109.6 1.6 121 166-303 97-223 (231)
116 1s2o_A SPP, sucrose-phosphatas 99.2 2.3E-11 7.8E-16 104.0 8.1 72 221-297 157-230 (244)
117 3n28_A Phosphoserine phosphata 99.2 4.9E-12 1.7E-16 113.3 3.6 113 165-303 178-313 (335)
118 1rku_A Homoserine kinase; phos 99.2 4.8E-11 1.6E-15 98.7 8.4 122 167-303 71-197 (206)
119 2i6x_A Hydrolase, haloacid deh 99.2 1.8E-12 6.2E-17 107.5 -0.5 106 166-274 90-198 (211)
120 3nvb_A Uncharacterized protein 99.2 4E-11 1.4E-15 108.2 7.8 46 223-269 309-356 (387)
121 3i28_A Epoxide hydrolase 2; ar 99.2 5.7E-12 2E-16 118.7 2.2 106 166-275 101-209 (555)
122 3skx_A Copper-exporting P-type 99.1 1.5E-10 5.1E-15 100.1 9.8 50 244-303 207-258 (280)
123 1ltq_A Polynucleotide kinase; 99.1 6.4E-11 2.2E-15 104.2 5.0 102 165-272 188-299 (301)
124 3a1c_A Probable copper-exporti 99.1 2.3E-09 7.8E-14 93.7 14.9 61 232-303 215-277 (287)
125 2yj3_A Copper-transporting ATP 98.6 1.8E-11 6E-16 106.0 0.0 114 164-303 135-251 (263)
126 2fi1_A Hydrolase, haloacid deh 99.0 4.1E-11 1.4E-15 97.5 1.2 100 166-274 83-183 (190)
127 1u02_A Trehalose-6-phosphate p 99.0 1.6E-09 5.6E-14 92.1 10.9 51 25-79 1-59 (239)
128 2i33_A Acid phosphatase; HAD s 99.0 4.8E-10 1.6E-14 96.6 5.7 62 21-82 55-144 (258)
129 2fea_A 2-hydroxy-3-keto-5-meth 98.9 2.6E-11 8.8E-16 102.9 -4.7 120 167-303 79-216 (236)
130 1l7m_A Phosphoserine phosphata 98.8 5.3E-09 1.8E-13 86.0 4.7 68 224-302 141-210 (211)
131 3p96_A Phosphoserine phosphata 98.7 6.7E-09 2.3E-13 95.6 5.4 112 166-303 257-391 (415)
132 4ap9_A Phosphoserine phosphata 98.7 6.1E-09 2.1E-13 84.9 3.3 117 166-304 80-198 (201)
133 2i7d_A 5'(3')-deoxyribonucleot 98.6 3.6E-09 1.2E-13 86.8 -1.4 109 166-303 74-190 (193)
134 2fue_A PMM 1, PMMH-22, phospho 98.5 7E-09 2.4E-13 89.4 -1.3 51 23-77 11-64 (262)
135 1q92_A 5(3)-deoxyribonucleotid 98.5 8.3E-09 2.8E-13 84.9 -1.6 108 166-303 76-192 (197)
136 3fvv_A Uncharacterized protein 98.4 5.7E-07 1.9E-11 75.2 8.4 87 166-268 93-203 (232)
137 2obb_A Hypothetical protein; s 98.4 1.5E-07 5E-12 73.1 4.2 60 24-83 2-68 (142)
138 1y8a_A Hypothetical protein AF 98.4 1.4E-08 4.9E-13 90.5 -2.3 53 239-302 214-276 (332)
139 3j08_A COPA, copper-exporting 98.1 1.9E-05 6.3E-10 76.5 11.8 51 243-303 519-571 (645)
140 1xpj_A Hypothetical protein; s 98.0 1E-05 3.5E-10 61.5 6.1 43 25-67 1-52 (126)
141 3j09_A COPA, copper-exporting 97.9 9E-05 3.1E-09 72.7 12.4 50 243-302 597-648 (723)
142 2jc9_A Cytosolic purine 5'-nuc 97.9 2.4E-05 8.3E-10 73.0 7.1 41 231-271 351-392 (555)
143 3pct_A Class C acid phosphatas 97.8 3.5E-05 1.2E-09 65.7 7.3 59 25-83 58-146 (260)
144 3rfu_A Copper efflux ATPase; a 97.8 0.0001 3.4E-09 72.3 11.0 55 25-82 534-594 (736)
145 3ixz_A Potassium-transporting 97.8 0.00029 1E-08 71.8 14.4 44 37-83 602-645 (1034)
146 2hhl_A CTD small phosphatase-l 97.7 4.7E-06 1.6E-10 68.4 -0.7 35 231-266 126-160 (195)
147 3ar4_A Sarcoplasmic/endoplasmi 97.6 0.00074 2.5E-08 68.6 13.8 44 37-83 601-644 (995)
148 3ocu_A Lipoprotein E; hydrolas 97.6 3.4E-05 1.2E-09 65.9 3.0 60 24-83 57-146 (262)
149 3f9r_A Phosphomannomutase; try 97.5 5.9E-05 2E-09 64.0 4.4 51 24-77 3-56 (246)
150 3bwv_A Putative 5'(3')-deoxyri 97.5 0.00013 4.4E-09 58.5 5.4 101 166-303 70-176 (180)
151 2zxe_A Na, K-ATPase alpha subu 97.4 0.002 6.9E-08 65.6 14.5 43 37-82 597-639 (1028)
152 2ght_A Carboxy-terminal domain 97.4 9.1E-06 3.1E-10 65.8 -2.4 32 233-265 115-146 (181)
153 2amy_A PMM 2, phosphomannomuta 97.2 0.00021 7.3E-09 60.3 3.7 50 23-76 4-56 (246)
154 3fvv_A Uncharacterized protein 97.2 0.00045 1.6E-08 57.2 5.4 40 40-82 93-132 (232)
155 3kbb_A Phosphorylated carbohyd 96.9 0.0046 1.6E-07 50.3 9.2 89 38-129 83-180 (216)
156 3s6j_A Hydrolase, haloacid deh 96.7 0.015 5.2E-07 47.4 10.9 88 38-129 90-187 (233)
157 2pib_A Phosphorylated carbohyd 96.7 0.012 4E-07 47.3 9.8 89 38-130 83-181 (216)
158 3i28_A Epoxide hydrolase 2; ar 96.6 0.0041 1.4E-07 57.8 7.2 90 39-130 100-201 (555)
159 2ah5_A COG0546: predicted phos 96.5 0.0083 2.9E-07 48.8 8.0 88 38-129 83-177 (210)
160 3kzx_A HAD-superfamily hydrola 96.5 0.013 4.6E-07 47.9 9.2 90 37-129 101-200 (231)
161 4ex6_A ALNB; modified rossman 96.3 0.017 5.7E-07 47.5 8.8 87 39-129 104-200 (237)
162 1qyi_A ZR25, hypothetical prot 96.3 0.02 6.8E-07 51.6 9.6 52 39-93 215-268 (384)
163 3cnh_A Hydrolase family protei 96.2 0.019 6.6E-07 45.8 8.6 89 36-129 83-181 (200)
164 3k1z_A Haloacid dehalogenase-l 96.1 0.022 7.4E-07 48.1 8.4 87 39-130 106-203 (263)
165 3mc1_A Predicted phosphatase, 96.0 0.025 8.7E-07 45.9 8.5 88 38-129 85-182 (226)
166 4fe3_A Cytosolic 5'-nucleotida 96.0 0.01 3.4E-07 51.4 6.0 43 38-83 140-182 (297)
167 4g9b_A Beta-PGM, beta-phosphog 96.0 0.031 1E-06 46.6 8.8 120 39-179 95-223 (243)
168 3nas_A Beta-PGM, beta-phosphog 95.9 0.036 1.2E-06 45.3 8.9 85 40-130 93-187 (233)
169 3qnm_A Haloacid dehalogenase-l 95.8 0.047 1.6E-06 44.6 9.2 88 38-130 106-204 (240)
170 3b8c_A ATPase 2, plasma membra 95.7 0.0069 2.4E-07 60.6 4.4 44 36-82 485-528 (885)
171 2om6_A Probable phosphoserine 95.7 0.085 2.9E-06 42.8 10.2 91 39-130 99-200 (235)
172 1yns_A E-1 enzyme; hydrolase f 95.6 0.082 2.8E-06 44.7 10.2 88 39-129 130-227 (261)
173 1ltq_A Polynucleotide kinase; 95.6 0.019 6.4E-07 49.7 6.3 103 26-130 160-294 (301)
174 4eek_A Beta-phosphoglucomutase 95.6 0.025 8.5E-07 47.3 6.8 86 40-129 111-208 (259)
175 2amy_A PMM 2, phosphomannomuta 95.6 0.0018 6.3E-08 54.4 -0.4 44 227-276 189-236 (246)
176 3dv9_A Beta-phosphoglucomutase 95.5 0.05 1.7E-06 44.7 8.3 86 39-129 108-205 (247)
177 3nuq_A Protein SSM1, putative 95.5 0.074 2.5E-06 45.1 9.4 85 40-128 143-244 (282)
178 3l5k_A Protein GS1, haloacid d 95.4 0.058 2E-06 44.7 8.3 87 40-130 113-214 (250)
179 2gfh_A Haloacid dehalogenase-l 95.4 0.054 1.8E-06 45.7 8.2 85 38-127 120-215 (260)
180 3qxg_A Inorganic pyrophosphata 95.3 0.059 2E-06 44.5 8.0 87 39-129 109-206 (243)
181 2i6x_A Hydrolase, haloacid deh 95.2 0.042 1.4E-06 44.2 6.8 87 39-130 89-191 (211)
182 3ed5_A YFNB; APC60080, bacillu 95.2 0.14 4.9E-06 41.6 10.0 86 39-129 103-200 (238)
183 3ddh_A Putative haloacid dehal 95.1 0.045 1.5E-06 44.3 6.6 88 39-130 105-199 (234)
184 3iru_A Phoshonoacetaldehyde hy 94.9 0.1 3.5E-06 43.6 8.5 88 39-129 111-209 (277)
185 4g63_A Cytosolic IMP-GMP speci 94.9 0.066 2.2E-06 49.3 7.6 42 231-272 284-326 (470)
186 2hdo_A Phosphoglycolate phosph 94.8 0.048 1.6E-06 43.8 6.1 88 38-130 82-179 (209)
187 1nnl_A L-3-phosphoserine phosp 94.8 0.03 1E-06 45.7 4.9 41 39-82 86-126 (225)
188 1mhs_A Proton pump, plasma mem 94.7 0.12 4.2E-06 51.7 9.6 50 243-302 627-678 (920)
189 2b0c_A Putative phosphatase; a 94.6 0.0088 3E-07 48.1 1.1 87 39-129 91-188 (206)
190 2zg6_A Putative uncharacterize 94.6 0.028 9.5E-07 45.9 4.2 50 39-92 95-144 (220)
191 4dcc_A Putative haloacid dehal 94.5 0.032 1.1E-06 45.8 4.3 89 40-130 113-214 (229)
192 3u26_A PF00702 domain protein; 94.5 0.16 5.4E-06 41.2 8.6 88 37-129 98-196 (234)
193 2pke_A Haloacid delahogenase-l 94.4 0.11 3.7E-06 43.1 7.4 88 38-130 111-204 (251)
194 2fi1_A Hydrolase, haloacid deh 94.3 0.19 6.4E-06 39.4 8.3 84 39-129 82-175 (190)
195 2wf7_A Beta-PGM, beta-phosphog 94.3 0.13 4.5E-06 41.3 7.5 85 39-129 91-185 (221)
196 1l7m_A Phosphoserine phosphata 94.2 0.087 3E-06 42.0 6.3 89 36-128 73-181 (211)
197 3p96_A Phosphoserine phosphata 94.2 0.09 3.1E-06 47.7 7.0 87 40-129 257-362 (415)
198 2go7_A Hydrolase, haloacid deh 94.2 0.13 4.5E-06 40.5 7.2 87 38-129 84-180 (207)
199 3umg_A Haloacid dehalogenase; 94.1 0.24 8.1E-06 40.6 8.9 88 36-130 113-210 (254)
200 3n28_A Phosphoserine phosphata 94.0 0.1 3.6E-06 45.7 6.8 88 39-130 178-285 (335)
201 2hcf_A Hydrolase, haloacid deh 93.9 0.35 1.2E-05 39.1 9.5 87 39-129 93-193 (234)
202 4gib_A Beta-phosphoglucomutase 93.8 0.084 2.9E-06 44.1 5.6 86 40-130 117-211 (250)
203 2yj3_A Copper-transporting ATP 92.9 0.011 3.8E-07 50.3 0.0 53 34-89 131-183 (263)
204 3umc_A Haloacid dehalogenase; 93.2 0.3 1E-05 40.1 8.0 87 37-130 118-214 (254)
205 3vay_A HAD-superfamily hydrola 93.1 0.34 1.2E-05 39.1 8.0 82 39-130 105-197 (230)
206 3smv_A S-(-)-azetidine-2-carbo 92.5 0.63 2.1E-05 37.5 8.9 86 38-130 98-197 (240)
207 4gxt_A A conserved functionall 92.5 0.13 4.4E-06 46.3 4.9 51 36-89 218-270 (385)
208 1q92_A 5(3)-deoxyribonucleotid 92.4 0.11 3.8E-06 41.6 4.1 34 37-70 73-107 (197)
209 2i7d_A 5'(3')-deoxyribonucleot 92.4 0.12 4E-06 41.3 4.1 42 37-81 71-113 (193)
210 3pct_A Class C acid phosphatas 92.2 0.048 1.6E-06 46.3 1.6 95 166-274 102-212 (260)
211 2fea_A 2-hydroxy-3-keto-5-meth 92.0 0.12 4.1E-06 42.6 3.9 39 38-81 76-114 (236)
212 1swv_A Phosphonoacetaldehyde h 91.9 0.65 2.2E-05 38.5 8.4 89 38-129 102-201 (267)
213 3ocu_A Lipoprotein E; hydrolas 91.8 0.046 1.6E-06 46.5 1.0 95 166-274 102-212 (262)
214 2p11_A Hypothetical protein; p 91.2 0.12 4.1E-06 42.4 3.0 41 38-82 95-135 (231)
215 3kd3_A Phosphoserine phosphohy 90.4 0.26 8.8E-06 39.3 4.4 40 40-82 83-122 (219)
216 1rku_A Homoserine kinase; phos 89.4 0.37 1.3E-05 38.4 4.5 44 36-83 66-109 (206)
217 3f9r_A Phosphomannomutase; try 89.1 0.079 2.7E-06 44.5 0.2 38 227-269 188-229 (246)
218 3bwv_A Putative 5'(3')-deoxyri 88.7 0.43 1.5E-05 37.4 4.3 27 37-64 67-93 (180)
219 2kln_A Probable sulphate-trans 86.8 1.2 4.3E-05 32.9 5.7 73 24-101 47-123 (130)
220 2fdr_A Conserved hypothetical 86.8 2.9 9.8E-05 33.3 8.4 84 38-128 86-182 (229)
221 2g80_A Protein UTR4; YEL038W, 86.3 3.3 0.00011 34.5 8.7 84 40-130 126-228 (253)
222 4as2_A Phosphorylcholine phosp 86.1 0.63 2.1E-05 40.8 4.1 51 37-91 141-194 (327)
223 4gxt_A A conserved functionall 84.6 0.82 2.8E-05 41.0 4.3 35 227-263 298-332 (385)
224 4dgh_A Sulfate permease family 79.6 1.8 6.2E-05 32.0 3.9 72 23-99 47-122 (130)
225 4ap9_A Phosphoserine phosphata 78.5 0.42 1.4E-05 37.5 -0.0 40 39-82 79-118 (201)
226 3qle_A TIM50P; chaperone, mito 74.4 2.7 9.1E-05 34.1 3.7 55 23-81 32-97 (204)
227 3llo_A Prestin; STAS domain, c 72.8 3.3 0.00011 31.0 3.8 72 24-100 63-139 (143)
228 3dbi_A Sugar-binding transcrip 72.0 45 0.0015 28.3 13.7 20 230-249 256-276 (338)
229 3tb6_A Arabinose metabolism tr 71.7 41 0.0014 27.6 13.0 22 230-251 215-237 (298)
230 3geb_A EYES absent homolog 2; 70.6 6 0.00021 33.0 5.0 46 222-271 213-258 (274)
231 3ny7_A YCHM protein, sulfate t 70.3 3.2 0.00011 30.1 3.1 64 23-92 44-111 (118)
232 4dgf_A Sulfate transporter sul 69.5 2.1 7.2E-05 31.9 1.9 71 23-99 50-125 (135)
233 1mhs_A Proton pump, plasma mem 68.8 4.2 0.00014 40.7 4.5 44 36-82 532-575 (920)
234 3ksm_A ABC-type sugar transpor 67.8 47 0.0016 26.9 11.2 20 231-251 202-221 (276)
235 3to5_A CHEY homolog; alpha(5)b 63.9 16 0.00056 27.0 6.0 51 24-82 57-111 (134)
236 3zxn_A RSBS, anti-sigma-factor 63.1 11 0.00037 27.5 4.8 72 24-101 42-116 (123)
237 2xbl_A Phosphoheptose isomeras 61.8 14 0.00047 29.0 5.6 37 35-71 123-159 (198)
238 3ef0_A RNA polymerase II subun 61.8 3.6 0.00012 36.6 2.2 24 41-65 77-100 (372)
239 3gbv_A Putative LACI-family tr 61.4 67 0.0023 26.4 13.0 23 91-114 120-142 (304)
240 2q5c_A NTRC family transcripti 58.8 28 0.00095 27.7 6.9 93 166-274 79-171 (196)
241 3g1w_A Sugar ABC transporter; 58.4 77 0.0026 26.1 13.7 38 231-269 202-241 (305)
242 3o74_A Fructose transport syst 58.2 72 0.0024 25.7 11.1 21 230-250 194-214 (272)
243 1x92_A APC5045, phosphoheptose 57.6 12 0.0004 29.5 4.5 32 34-65 119-150 (199)
244 3sho_A Transcriptional regulat 57.6 16 0.00054 28.3 5.2 33 36-68 95-127 (187)
245 3jy6_A Transcriptional regulat 57.3 77 0.0026 25.7 12.7 65 45-115 53-131 (276)
246 1tk9_A Phosphoheptose isomeras 57.2 11 0.00036 29.4 4.1 34 35-68 117-150 (188)
247 2xhz_A KDSD, YRBH, arabinose 5 56.3 14 0.00048 28.6 4.7 32 35-66 103-134 (183)
248 3egc_A Putative ribose operon 55.6 84 0.0029 25.7 11.8 20 230-249 200-220 (291)
249 3luf_A Two-component system re 54.7 21 0.00073 29.4 5.8 36 44-82 63-98 (259)
250 3heb_A Response regulator rece 53.9 33 0.0011 25.0 6.3 51 24-82 59-113 (152)
251 3gl9_A Response regulator; bet 53.5 31 0.0011 24.1 5.9 37 43-82 60-100 (122)
252 3e61_A Putative transcriptiona 53.3 70 0.0024 25.9 8.9 22 230-251 191-213 (277)
253 1th8_B Anti-sigma F factor ant 53.1 33 0.0011 23.9 6.0 53 25-82 43-97 (116)
254 1h4x_A SPOIIAA, anti-sigma F f 52.3 40 0.0014 23.6 6.3 63 24-94 41-106 (117)
255 1c9k_A COBU, adenosylcobinamid 52.1 3.6 0.00012 32.6 0.5 41 25-65 74-136 (180)
256 2lpm_A Two-component response 51.7 6.1 0.00021 29.0 1.6 37 24-65 53-89 (123)
257 3hdv_A Response regulator; PSI 51.5 49 0.0017 23.3 6.8 37 43-82 66-105 (136)
258 1m3s_A Hypothetical protein YC 51.1 20 0.00069 27.7 4.8 30 36-65 87-116 (186)
259 1vim_A Hypothetical protein AF 51.1 16 0.00054 29.0 4.2 33 34-66 95-127 (200)
260 4e7p_A Response regulator; DNA 50.8 56 0.0019 23.6 7.2 37 43-82 80-118 (150)
261 3cnb_A DNA-binding response re 50.6 48 0.0016 23.5 6.7 37 43-82 68-108 (143)
262 3gt7_A Sensor protein; structu 50.5 50 0.0017 24.1 6.9 50 25-82 52-105 (154)
263 3d6j_A Putative haloacid dehal 49.5 1.6 5.6E-05 34.5 -2.0 28 24-51 5-35 (225)
264 3kht_A Response regulator; PSI 49.1 32 0.0011 24.7 5.5 37 43-82 65-105 (144)
265 1k68_A Phytochrome response re 48.9 33 0.0011 24.2 5.5 51 24-82 55-109 (140)
266 2yva_A DNAA initiator-associat 48.6 22 0.00074 27.8 4.6 31 34-64 115-145 (196)
267 2hoq_A Putative HAD-hydrolase 48.4 3 0.0001 33.8 -0.6 32 25-56 2-36 (241)
268 3shq_A UBLCP1; phosphatase, hy 48.1 16 0.00053 31.7 3.9 55 24-82 139-203 (320)
269 3kke_A LACI family transcripti 47.9 1.2E+02 0.004 25.1 13.5 37 230-269 211-250 (303)
270 4hyl_A Stage II sporulation pr 47.0 27 0.00094 24.6 4.6 56 22-82 39-96 (117)
271 3kto_A Response regulator rece 46.2 56 0.0019 23.1 6.4 50 30-82 51-104 (136)
272 3h1g_A Chemotaxis protein CHEY 45.7 43 0.0015 23.5 5.6 50 25-82 52-105 (129)
273 3nhm_A Response regulator; pro 45.0 39 0.0013 23.7 5.3 23 42-64 60-86 (133)
274 1jeo_A MJ1247, hypothetical pr 44.7 24 0.00083 27.1 4.3 31 35-65 89-119 (180)
275 3a1c_A Probable copper-exporti 44.5 13 0.00045 31.2 2.9 28 164-192 162-190 (287)
276 3huu_A Transcription regulator 44.5 1.3E+02 0.0045 24.7 11.7 22 230-251 216-238 (305)
277 2qr3_A Two-component system re 44.4 71 0.0024 22.5 6.8 37 43-82 66-104 (140)
278 3ca8_A Protein YDCF; two domai 44.4 1.4E+02 0.0047 24.9 11.4 74 30-105 37-113 (266)
279 3cz5_A Two-component response 44.2 69 0.0023 23.2 6.8 37 43-82 65-103 (153)
280 2zay_A Response regulator rece 44.2 39 0.0013 24.3 5.3 51 24-82 52-106 (147)
281 1sbo_A Putative anti-sigma fac 44.0 22 0.00075 24.5 3.6 51 26-82 45-98 (110)
282 3eod_A Protein HNR; response r 43.9 54 0.0019 22.8 6.0 50 25-82 52-103 (130)
283 3can_A Pyruvate-formate lyase- 43.9 47 0.0016 25.4 5.9 35 41-76 17-52 (182)
284 2i2w_A Phosphoheptose isomeras 43.5 18 0.0006 29.0 3.4 27 39-65 142-168 (212)
285 5nul_A Flavodoxin; electron tr 43.2 49 0.0017 23.9 5.7 62 22-83 43-110 (138)
286 3k4h_A Putative transcriptiona 43.2 1.3E+02 0.0045 24.4 12.7 22 230-251 206-228 (292)
287 3f6r_A Flavodoxin; FMN binding 42.6 47 0.0016 24.4 5.6 59 24-83 49-119 (148)
288 2r25_B Osmosensing histidine p 41.9 65 0.0022 22.7 6.1 51 24-82 52-105 (133)
289 3lua_A Response regulator rece 41.4 34 0.0012 24.4 4.5 37 43-82 65-105 (140)
290 3oiz_A Antisigma-factor antago 41.0 11 0.00039 26.1 1.6 53 23-81 42-97 (99)
291 3mm4_A Histidine kinase homolo 40.5 48 0.0016 25.9 5.6 52 24-82 119-176 (206)
292 3ilh_A Two component response 40.5 56 0.0019 23.2 5.6 50 25-82 61-117 (146)
293 3flh_A Uncharacterized protein 40.4 18 0.00061 26.1 2.7 70 13-82 17-99 (124)
294 2hi0_A Putative phosphoglycola 40.2 5.8 0.0002 32.1 -0.1 30 25-57 4-36 (240)
295 3fxa_A SIS domain protein; str 39.5 21 0.00071 28.1 3.2 33 36-68 100-132 (201)
296 3jte_A Response regulator rece 39.4 56 0.0019 23.2 5.5 51 24-82 49-101 (143)
297 3h5t_A Transcriptional regulat 39.4 1.8E+02 0.0061 24.7 14.6 37 230-269 282-319 (366)
298 3t6k_A Response regulator rece 39.2 60 0.002 23.0 5.6 36 24-64 48-87 (136)
299 3trj_A Phosphoheptose isomeras 39.2 30 0.001 27.4 4.1 31 35-65 121-151 (201)
300 2hsz_A Novel predicted phospha 39.1 6.1 0.00021 32.1 -0.1 22 20-41 18-41 (243)
301 3etn_A Putative phosphosugar i 39.1 38 0.0013 27.2 4.8 29 39-67 117-147 (220)
302 8abp_A L-arabinose-binding pro 38.9 1.6E+02 0.0054 24.1 9.9 34 230-264 211-244 (306)
303 3hzh_A Chemotaxis response reg 38.9 58 0.002 23.8 5.6 37 43-82 97-135 (157)
304 1zjj_A Hypothetical protein PH 38.8 15 0.00053 30.1 2.4 29 36-66 127-155 (263)
305 1k66_A Phytochrome response re 38.8 44 0.0015 23.9 4.8 51 24-82 62-116 (149)
306 2pju_A Propionate catabolism o 38.7 1.1E+02 0.0037 24.8 7.4 89 166-270 91-179 (225)
307 3b2n_A Uncharacterized protein 38.3 74 0.0025 22.3 6.0 51 24-82 49-101 (133)
308 3k9c_A Transcriptional regulat 38.2 1.6E+02 0.0055 23.9 13.5 19 231-249 200-219 (289)
309 3cg0_A Response regulator rece 37.8 62 0.0021 22.8 5.5 36 44-82 70-106 (140)
310 2ka5_A Putative anti-sigma fac 37.8 27 0.00091 25.2 3.3 54 24-82 51-106 (125)
311 3qk7_A Transcriptional regulat 37.7 1.7E+02 0.0057 23.9 16.1 65 44-113 54-132 (294)
312 1i3c_A Response regulator RCP1 37.6 76 0.0026 22.8 6.0 35 25-64 62-100 (149)
313 3eul_A Possible nitrate/nitrit 36.9 75 0.0026 22.9 5.9 51 24-82 61-113 (152)
314 3hcw_A Maltose operon transcri 36.7 1.7E+02 0.0059 23.8 12.9 37 230-269 206-245 (295)
315 4g63_A Cytosolic IMP-GMP speci 36.1 22 0.00075 32.6 3.0 30 42-75 189-218 (470)
316 3utn_X Thiosulfate sulfurtrans 35.9 44 0.0015 28.9 4.9 51 222-273 92-148 (327)
317 2nn4_A Hypothetical protein YQ 35.8 10 0.00035 24.9 0.6 25 231-260 8-32 (72)
318 3f6c_A Positive transcription 35.8 57 0.002 22.8 5.0 51 24-82 46-98 (134)
319 1jbe_A Chemotaxis protein CHEY 35.7 80 0.0027 21.7 5.7 37 43-82 63-103 (128)
320 2l82_A Designed protein OR32; 34.9 38 0.0013 24.1 3.5 63 17-83 67-132 (162)
321 3m6m_D Sensory/regulatory prot 34.8 90 0.0031 22.3 6.0 36 44-82 73-114 (143)
322 1wv9_A Rhodanese homolog TT165 34.6 22 0.00074 24.1 2.2 67 13-82 4-79 (94)
323 3kjx_A Transcriptional regulat 34.5 2.1E+02 0.007 24.1 13.6 20 231-250 262-282 (344)
324 3hdg_A Uncharacterized protein 34.4 58 0.002 22.9 4.8 37 43-82 65-103 (137)
325 2rgy_A Transcriptional regulat 34.3 1.9E+02 0.0064 23.5 14.1 63 47-114 59-135 (290)
326 3jx9_A Putative phosphoheptose 34.2 36 0.0012 26.5 3.6 23 41-63 90-112 (170)
327 3hv2_A Response regulator/HD d 34.0 65 0.0022 23.3 5.1 21 43-63 72-94 (153)
328 2rd5_A Acetylglutamate kinase- 33.9 36 0.0012 28.9 4.0 75 4-82 10-91 (298)
329 3gv0_A Transcriptional regulat 33.7 1.9E+02 0.0065 23.4 14.3 38 231-269 203-241 (288)
330 3e3m_A Transcriptional regulat 33.7 2.2E+02 0.0074 24.1 10.6 96 43-164 174-288 (355)
331 1qkk_A DCTD, C4-dicarboxylate 33.7 72 0.0025 23.1 5.4 37 43-82 61-99 (155)
332 2jc9_A Cytosolic purine 5'-nuc 33.6 20 0.00068 33.5 2.4 23 41-64 248-270 (555)
333 3l49_A ABC sugar (ribose) tran 33.3 1.9E+02 0.0065 23.3 10.5 17 231-249 206-222 (291)
334 2lnd_A De novo designed protei 33.2 36 0.0012 22.8 2.9 39 44-82 40-79 (112)
335 1tmy_A CHEY protein, TMY; chem 33.2 95 0.0033 21.0 5.7 51 24-82 47-99 (120)
336 2qvg_A Two component response 33.0 67 0.0023 22.8 5.0 51 24-82 59-113 (143)
337 2zj3_A Glucosamine--fructose-6 32.8 53 0.0018 28.9 5.0 34 35-68 114-147 (375)
338 3hly_A Flavodoxin-like domain; 32.7 96 0.0033 23.2 6.0 58 22-83 49-112 (161)
339 1qv9_A F420-dependent methylen 32.7 38 0.0013 27.9 3.5 50 30-82 65-115 (283)
340 1vee_A Proline-rich protein fa 32.6 59 0.002 23.6 4.6 69 13-82 7-100 (134)
341 2rjn_A Response regulator rece 32.4 1.2E+02 0.0042 21.7 6.5 21 43-63 65-87 (154)
342 3grc_A Sensor protein, kinase; 32.1 70 0.0024 22.6 4.9 21 43-63 64-88 (140)
343 3f6p_A Transcriptional regulat 32.1 1.2E+02 0.004 20.8 6.1 21 43-63 60-81 (120)
344 2pl1_A Transcriptional regulat 31.6 1.2E+02 0.0041 20.5 6.1 22 43-64 58-81 (121)
345 1nri_A Hypothetical protein HI 31.4 44 0.0015 28.5 4.1 34 33-66 145-178 (306)
346 1dbw_A Transcriptional regulat 31.3 1.3E+02 0.0043 20.6 6.8 37 43-82 61-99 (126)
347 3cvj_A Putative phosphoheptose 31.3 39 0.0013 27.5 3.7 32 33-64 113-144 (243)
348 3fni_A Putative diflavin flavo 31.0 61 0.0021 24.4 4.5 59 21-83 53-117 (159)
349 1gmx_A GLPE protein; transfera 30.9 66 0.0023 22.2 4.4 67 13-82 7-84 (108)
350 3t6o_A Sulfate transporter/ant 30.5 34 0.0012 24.3 2.9 53 24-82 47-103 (121)
351 3dbi_A Sugar-binding transcrip 30.5 2.4E+02 0.0081 23.5 10.8 85 42-129 167-268 (338)
352 2yx0_A Radical SAM enzyme; pre 30.3 90 0.0031 26.7 6.0 37 41-80 156-192 (342)
353 4dad_A Putative pilus assembly 30.2 51 0.0018 23.6 3.9 52 23-82 66-119 (146)
354 1srr_A SPO0F, sporulation resp 29.8 1E+02 0.0035 21.0 5.5 36 24-64 47-84 (124)
355 2pr7_A Haloacid dehalogenase/e 29.8 79 0.0027 22.1 4.9 26 166-192 19-45 (137)
356 2poc_A D-fructose-6- PH, isome 29.6 63 0.0022 28.2 5.0 33 36-68 105-137 (367)
357 1kgs_A DRRD, DNA binding respo 29.5 1E+02 0.0034 24.0 5.8 51 24-82 46-98 (225)
358 3hs3_A Ribose operon repressor 29.4 1.9E+02 0.0065 23.3 7.8 22 230-251 192-214 (277)
359 1obo_A Flavodoxin; electron tr 29.3 66 0.0023 24.1 4.5 62 22-83 44-116 (169)
360 1j5x_A Glucosamine-6-phosphate 29.3 58 0.002 28.2 4.6 38 31-68 102-140 (342)
361 3r0j_A Possible two component 29.0 1.2E+02 0.004 24.3 6.3 51 24-82 67-119 (250)
362 3eua_A Putative fructose-amino 29.0 69 0.0024 27.5 5.0 33 36-68 82-114 (329)
363 1tv8_A MOAA, molybdenum cofact 28.7 47 0.0016 28.5 3.9 71 10-82 47-121 (340)
364 3gk5_A Uncharacterized rhodane 28.5 17 0.00058 25.5 0.8 66 13-82 6-81 (108)
365 3crn_A Response regulator rece 28.3 1.2E+02 0.0043 21.0 5.7 51 24-82 47-99 (132)
366 3h5t_A Transcriptional regulat 28.3 2.7E+02 0.0093 23.5 9.5 86 41-129 174-294 (366)
367 1yv9_A Hydrolase, haloacid deh 28.2 29 0.00099 28.2 2.4 29 36-66 123-151 (264)
368 1mb3_A Cell division response 27.8 69 0.0024 21.9 4.1 35 24-63 45-83 (124)
369 3cfy_A Putative LUXO repressor 27.8 1.3E+02 0.0045 21.1 5.8 51 24-82 48-100 (137)
370 3i42_A Response regulator rece 27.7 1.4E+02 0.0047 20.4 5.8 23 43-65 61-87 (127)
371 3o1i_D Periplasmic protein TOR 27.5 2.5E+02 0.0084 22.8 8.5 25 91-115 118-144 (304)
372 3qk7_A Transcriptional regulat 27.3 2.5E+02 0.0086 22.8 11.6 86 41-129 111-213 (294)
373 3k4h_A Putative transcriptiona 27.1 2.5E+02 0.0084 22.6 11.1 84 43-129 118-218 (292)
374 1l1s_A Hypothetical protein MT 26.8 1.3E+02 0.0046 20.9 5.5 34 30-63 35-74 (113)
375 2lbw_A H/ACA ribonucleoprotein 26.7 1.5E+02 0.0052 21.2 5.8 46 37-82 18-65 (121)
376 3snk_A Response regulator CHEY 26.7 34 0.0012 24.3 2.2 51 24-82 59-111 (135)
377 2fsx_A RV0390, COG0607: rhodan 26.6 38 0.0013 25.1 2.6 20 13-32 7-27 (148)
378 3fz4_A Putative arsenate reduc 26.6 90 0.0031 22.3 4.6 49 33-82 6-55 (120)
379 1dz3_A Stage 0 sporulation pro 26.5 1.2E+02 0.004 21.0 5.3 51 24-82 48-101 (130)
380 1wv2_A Thiazole moeity, thiazo 26.4 2.8E+02 0.0096 23.1 8.1 45 226-275 174-221 (265)
381 2qxy_A Response regulator; reg 26.3 71 0.0024 22.6 4.1 36 44-82 62-99 (142)
382 2a3n_A Putative glucosamine-fr 26.3 63 0.0022 28.1 4.3 28 38-65 112-139 (355)
383 3kcn_A Adenylate cyclase homol 26.1 97 0.0033 22.2 4.9 34 25-63 49-84 (151)
384 3ilm_A ALR3790 protein; rhodan 25.7 61 0.0021 23.9 3.6 69 12-82 1-82 (141)
385 1tzb_A Glucose-6-phosphate iso 25.7 69 0.0024 27.1 4.3 31 35-65 86-116 (302)
386 1p6q_A CHEY2; chemotaxis, sign 25.5 74 0.0025 22.0 4.0 20 44-63 66-89 (129)
387 2jtq_A Phage shock protein E; 25.5 67 0.0023 21.0 3.4 36 46-82 31-67 (85)
388 3cg4_A Response regulator rece 25.5 1.7E+02 0.0059 20.3 6.2 22 43-64 65-90 (142)
389 3hix_A ALR3790 protein; rhodan 25.4 57 0.002 22.5 3.2 28 54-82 51-78 (106)
390 3g68_A Putative phosphosugar i 25.3 79 0.0027 27.5 4.7 31 38-68 92-122 (352)
391 2qzj_A Two-component response 25.1 99 0.0034 21.8 4.7 36 24-64 48-84 (136)
392 3miz_A Putative transcriptiona 24.9 2.2E+02 0.0076 23.1 7.5 84 43-129 118-223 (301)
393 3knz_A Putative sugar binding 24.7 80 0.0027 27.6 4.7 35 36-70 105-139 (366)
394 3rqi_A Response regulator prot 24.7 1.2E+02 0.004 22.9 5.2 51 24-82 51-103 (184)
395 2z2u_A UPF0026 protein MJ0257; 24.7 1.4E+02 0.0049 24.9 6.3 27 40-66 141-167 (311)
396 1xhf_A DYE resistance, aerobic 24.6 1.6E+02 0.0054 19.9 5.6 21 44-64 62-83 (123)
397 1a04_A Nitrate/nitrite respons 24.5 1.5E+02 0.0051 22.8 6.0 51 24-82 51-103 (215)
398 1j0g_A Hypothetical protein 18 24.3 13 0.00044 24.9 -0.5 40 223-263 32-71 (92)
399 3fj1_A Putative phosphosugar i 23.9 80 0.0028 27.3 4.5 34 37-70 100-133 (344)
400 1byr_A Protein (endonuclease); 23.9 97 0.0033 22.7 4.5 41 43-83 41-84 (155)
401 1bvy_F Protein (cytochrome P45 23.5 2E+02 0.0067 22.4 6.4 59 22-82 65-137 (191)
402 3klb_A Putative flavoprotein; 23.4 1.3E+02 0.0045 22.5 5.2 40 22-62 76-115 (162)
403 3hba_A Putative phosphosugar i 23.1 86 0.0029 27.0 4.5 33 38-70 100-132 (334)
404 3l86_A Acetylglutamate kinase; 23.1 1.2E+02 0.0039 25.6 5.2 40 41-84 52-91 (279)
405 3fkj_A Putative phosphosugar i 23.1 68 0.0023 27.8 3.8 31 38-68 99-129 (347)
406 1qpz_A PURA, protein (purine n 22.6 3.3E+02 0.011 22.6 9.3 103 24-129 138-264 (340)
407 2l69_A Rossmann 2X3 fold prote 22.6 1.7E+02 0.0058 20.1 4.9 64 16-83 40-104 (134)
408 1zgz_A Torcad operon transcrip 21.9 1.7E+02 0.0058 19.7 5.3 36 24-64 46-82 (122)
409 3hzu_A Thiosulfate sulfurtrans 21.9 93 0.0032 26.5 4.5 74 9-82 38-138 (318)
410 2jba_A Phosphate regulon trans 21.8 75 0.0026 21.8 3.3 35 24-63 46-84 (127)
411 2fep_A Catabolite control prot 21.8 3.2E+02 0.011 22.0 15.2 19 231-249 210-229 (289)
412 3cwq_A Para family chromosome 21.6 1.5E+02 0.0052 23.1 5.5 66 17-82 60-151 (209)
413 2fz5_A Flavodoxin; alpha/beta 21.6 1.2E+02 0.004 21.5 4.5 61 22-83 44-111 (137)
414 1p2f_A Response regulator; DRR 21.6 1.1E+02 0.0038 23.7 4.7 52 23-82 42-95 (220)
415 2qsj_A DNA-binding response re 21.4 80 0.0028 22.7 3.5 51 24-82 50-102 (154)
416 2vk2_A YTFQ, ABC transporter p 21.3 3.3E+02 0.011 22.1 12.4 39 231-269 206-246 (306)
417 2pd2_A Hypothetical protein ST 21.3 2E+02 0.0069 19.6 5.5 20 44-63 50-69 (108)
418 3ojc_A Putative aspartate/glut 21.1 3.2E+02 0.011 21.8 7.7 80 40-130 61-148 (231)
419 1moq_A Glucosamine 6-phosphate 21.0 87 0.003 27.3 4.2 32 37-68 108-140 (368)
420 3qi7_A Putative transcriptiona 20.8 4.3E+02 0.015 23.2 9.3 81 42-129 98-191 (371)
421 2hhg_A Hypothetical protein RP 20.5 31 0.0011 25.2 1.0 21 12-32 23-45 (139)
422 2pju_A Propionate catabolism o 20.4 1.3E+02 0.0046 24.2 4.9 77 45-129 96-175 (225)
423 1y8a_A Hypothetical protein AF 20.4 99 0.0034 26.2 4.4 24 39-63 103-126 (332)
424 3brq_A HTH-type transcriptiona 20.3 3.4E+02 0.011 21.7 12.6 19 231-249 215-234 (296)
425 3cs3_A Sugar-binding transcrip 20.3 3.3E+02 0.011 21.7 10.7 21 231-251 192-213 (277)
426 1ykg_A SIR-FP, sulfite reducta 20.3 1.5E+02 0.0053 22.2 5.0 61 22-82 54-126 (167)
427 3rdw_A Putative arsenate reduc 20.3 1.3E+02 0.0044 21.5 4.3 50 33-83 8-59 (121)
428 2aml_A SIS domain protein; 469 20.2 88 0.003 27.4 4.0 31 36-66 105-136 (373)
429 1urh_A 3-mercaptopyruvate sulf 20.1 54 0.0019 27.2 2.5 20 13-32 154-173 (280)
430 1o7j_A L-asparaginase; atomic 20.0 1.7E+02 0.0057 25.2 5.7 24 40-63 255-278 (327)
No 1
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=100.00 E-value=1.7e-39 Score=292.96 Aligned_cols=273 Identities=22% Similarity=0.230 Sum_probs=222.0
Q ss_pred hccCEEEEeE--EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHH-hCCCccCCCCeechHHHHHHHH
Q 022007 23 DSVDAFLFDC--VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFH-SLGVSVSEDEIFSSSFAAAMYL 99 (304)
Q Consensus 23 ~~~k~i~fDi--tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~-~lG~~~~~~~i~~~~~~~~~~l 99 (304)
.+.|+++||+ |||++..++|+|.++|+.|++.|++++++|||++++++++.++|. .+|+++.+++|++|+.+++.|+
T Consensus 11 ~~~~~~l~D~DGvl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~~~~~~~~ 90 (352)
T 3kc2_A 11 SKKIAFAFDIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHTPYKSLV 90 (352)
T ss_dssp -CCEEEEECCBTTTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTTGGGGGGT
T ss_pred ccCCEEEEECCCeeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehHHHHHHHH
Confidence 3689999999 999999999999999999999999999999999999999999998 5999999999999999988877
Q ss_pred HhCCCCCCCeEEEEcChhHHHHHHHcCCcccCCCCCcc---------hhhhh----ccccccc--cCCCccEEEEecCCC
Q 022007 100 KVNNFPQENKVYVIGGEGILEELRQAGYTGLGGPEDGE---------KRVQL----KSNCLFE--HDKNVGAVVVGLDPH 164 (304)
Q Consensus 100 ~~~~~~~~~~v~~~g~~~~~~~l~~~g~~~~~~~~~~~---------~~~~~----~~~~~~~--~~~~~~~v~~~~~~~ 164 (304)
.. .+++|++|..++.+.+++.|++.+....+.. ..+.. ....... .++.+++|+++.+..
T Consensus 91 ~~-----~~~v~viG~~~l~~~l~~~G~~~v~~~~d~~~~~~~~~p~~~l~~ee~~~~~d~ipD~~~~~v~AVvv~~Dp~ 165 (352)
T 3kc2_A 91 NK-----YSRILAVGTPSVRGVAEGYGFQDVVHQTDIVRYNRDIAPFSGLSDEQVMEYSRDIPDLTTKKFDAVLVFNDPH 165 (352)
T ss_dssp TT-----CSEEEEESSTTHHHHHHHHTCSEEEEHHHHHHHCGGGCTTCCCCHHHHHHHCCCCTTTTTSCCCEEEECSCCS
T ss_pred hc-----CCEEEEECCHHHHHHHHhCCCeEecchhHhhhhcccccccccCCHHHHhhhccCcccccccCCCEEEEeCCCc
Confidence 42 3689999999999999999998763210000 00000 0011110 136789999999999
Q ss_pred CCHHHHHHHHHHHHc--------------CCCceEEEecCCCccCCCCCccccChHHHHHHHHH----hhCCC--CcccC
Q 022007 165 INYYKLQYGTLCIRE--------------NPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCA----STEKE--PIVVG 224 (304)
Q Consensus 165 ~~~~~~~~~l~~l~~--------------~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~----~~~~~--~~~~g 224 (304)
..+++++.++++|.. .+++++++||+|..++.......++.|++...++. ++|.+ ....|
T Consensus 166 d~~~~lq~~~d~L~s~~G~~~~~~~~~~~~~~~~~i~tN~D~~~~~~~~~~r~g~Ga~~~al~~~y~~~tg~~~~~~~~G 245 (352)
T 3kc2_A 166 DWAADIQIISDAINSENGMLNTLRNEKSGKPSIPIYFSNQDLLWANPYKLNRFGQGAFRLLVRRLYLELNGEPLQDYTLG 245 (352)
T ss_dssp CHHHHHHHHHHHHTSBTTBTTCCCSCCCSSCSSCEEESCCCSEECCSSSSCEECHHHHHHHHHHHHHHHHSSCCCCEECS
T ss_pred chHHHHHHHHHHHHhcCCCcCcccccccCCCCCeEEEECCCcccccCCCCcccCchHHHHHHHHHHHHhcCCCCCceEec
Confidence 999999999999974 25788999999997776555567899998777766 57776 47899
Q ss_pred CCcHHHHHHHHHHc----------------------CC-----CCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCcc
Q 022007 225 KPSTFMMEILSKKF----------------------QI-----ASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQS 277 (304)
Q Consensus 225 KP~~~~~~~al~~l----------------------g~-----~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~ 277 (304)
||++.+|+.|++.+ |+ ++++++||||++.+||.+|+++||+++||.+|.+..+
T Consensus 246 KP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~~~~~ 325 (352)
T 3kc2_A 246 KPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVYNEG 325 (352)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSSCCTT
T ss_pred CCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCCCCcc
Confidence 99999999987765 22 6799999999976899999999999999999987655
Q ss_pred ccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 278 TLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 278 ~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
+.. ....|+++++++.|+.++|.
T Consensus 326 ~~~---~~~~pd~vi~~l~el~~~il 348 (352)
T 3kc2_A 326 DDL---KECKPTLIVNDVFDAVTKTL 348 (352)
T ss_dssp CCC---TTCCCSEECSSHHHHHHHHH
T ss_pred ccc---ccCCCCEEECCHHHHHHHHH
Confidence 421 23589999999999998764
No 2
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=100.00 E-value=3.8e-37 Score=268.34 Aligned_cols=249 Identities=33% Similarity=0.503 Sum_probs=219.7
Q ss_pred ccCEEEEeE--EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHHHHHHHHHh
Q 022007 24 SVDAFLFDC--VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSFAAAMYLKV 101 (304)
Q Consensus 24 ~~k~i~fDi--tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~~l~~ 101 (304)
++|+|+||+ |||++++.+|++.++|++|+++|++++++||+++|+...+.+.++++|++...++++++......++..
T Consensus 4 ~~kli~~DlDGTLl~~~~~i~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~~~~~~~~~l~~ 83 (264)
T 3epr_A 4 AYKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATVDYMND 83 (264)
T ss_dssp CCCEEEECCBTTTEETTEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHHHHHHH
T ss_pred CCCEEEEeCCCceEeCCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheecHHHHHHHHHHH
Confidence 589999999 999999988999999999999999999999999999999999999999999889999999999999876
Q ss_pred CCCCCCCeEEEEcChhHHHHHHHcCCcccCCCCCcchhhhhccccccccCCCccEEEEecCCCCCHHHHHHHHHHHHcCC
Q 022007 102 NNFPQENKVYVIGGEGILEELRQAGYTGLGGPEDGEKRVQLKSNCLFEHDKNVGAVVVGLDPHINYYKLQYGTLCIRENP 181 (304)
Q Consensus 102 ~~~~~~~~v~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~l~~~~ 181 (304)
... ...+++.+...+.+.+.+.|+.+. ....++++.+.+..+.|+.+..++..++.
T Consensus 84 ~~~--~~~~~~~~~~~l~~~l~~~g~~~~--------------------~~~~~~v~~~~~~~~~~~~~~~~~~~l~~-- 139 (264)
T 3epr_A 84 MNR--GKTAYVIGEEGLKKAIADAGYVED--------------------TKNPAYVVVGLDWNVTYDKLATATLAIQN-- 139 (264)
T ss_dssp HTC--CSEEEEESCHHHHHHHHHTTCEEC--------------------SSSCSEEEECCCTTCCHHHHHHHHHHHHT--
T ss_pred hCC--CCeEEEECCHHHHHHHHHcCCccc--------------------CCcCCEEEEeCCCCCCHHHHHHHHHHHHC--
Confidence 532 367999999999999999998763 33567888888889999999999888854
Q ss_pred CceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHH
Q 022007 182 GCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQN 261 (304)
Q Consensus 182 ~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~ 261 (304)
+.+++++|++...+.. ....++.+.+...|+.+++.+....+||+|.+|+.+++++|++|++++||||++.+||.||++
T Consensus 140 ~~~~i~~n~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~ 218 (264)
T 3epr_A 140 GALFIGTNPDLNIPTE-RGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGIN 218 (264)
T ss_dssp TCEEEESCCCSEEEET-TEEEECHHHHHHHHHHHHSCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHH
T ss_pred CCeEEEEcCCccccCC-CceecCccHHHHHHHHHhCCCcccCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHH
Confidence 7889999998844432 235677888999999999999999999999999999999999999999999996699999999
Q ss_pred cCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHH
Q 022007 262 AGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDIL 299 (304)
Q Consensus 262 aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~ 299 (304)
+|+++++|.+|++..+++.. ....||++++++.||.
T Consensus 219 aG~~~~~v~~g~~~~~~~~~--~~~~pd~~~~~l~~l~ 254 (264)
T 3epr_A 219 NDIDTLLVTTGFTTVEEVPD--LPIQPSYVLASLDEWT 254 (264)
T ss_dssp HTCEEEEETTSSSCGGGGGG--CSSCCSEEESCGGGCC
T ss_pred CCCeEEEECCCCCChHHHHh--cCCCCCEEECCHHHHh
Confidence 99999999999988776653 1237999999999874
No 3
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=100.00 E-value=3.6e-37 Score=274.18 Aligned_cols=280 Identities=38% Similarity=0.678 Sum_probs=234.8
Q ss_pred cccchhhHHHhhhccCEEEEeE--EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc-cCCCC
Q 022007 11 ELLSANNITALFDSVDAFLFDC--VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS-VSEDE 87 (304)
Q Consensus 11 ~~~~~~~~~~~~~~~k~i~fDi--tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~-~~~~~ 87 (304)
...+.+++.++++++|+|+||+ |||++..++|++.++|++|+++|++++++|||++|+...+.++++++|++ +..++
T Consensus 7 ~~~~~~~~~~~~~~~k~i~~D~DGTL~~~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~~~~~~ 86 (306)
T 2oyc_A 7 ERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQ 86 (306)
T ss_dssp EECCHHHHHHHHHHCSEEEECSBTTTEETTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCCSCCGGG
T ss_pred hcCCHHHHHHHHhhCCEEEECCCCcEecCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCCcCChhh
Confidence 4578889999999999999999 99999999999999999999999999999999999999999999999999 88999
Q ss_pred eechHHHHHHHHHhCCCC----CCCeEEEEcChhHHHHHHHcCCcccCCCCCcchhhhhccccccccCCCccEEEEecCC
Q 022007 88 IFSSSFAAAMYLKVNNFP----QENKVYVIGGEGILEELRQAGYTGLGGPEDGEKRVQLKSNCLFEHDKNVGAVVVGLDP 163 (304)
Q Consensus 88 i~~~~~~~~~~l~~~~~~----~~~~v~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 163 (304)
+++++.++..|+.. ++. .+.+++++|...+.+.+...|+.......+ .+...+++++|+.+.+.
T Consensus 87 i~~~~~~~~~~l~~-~~~~~~~~~~~v~~~g~~~l~~~l~~~g~~~~~~~~~-----------~~~~~~~~~~v~~~~~~ 154 (306)
T 2oyc_A 87 LFSSALCAARLLRQ-RLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSA-----------GDGAAPRVRAVLVGYDE 154 (306)
T ss_dssp EEEHHHHHHHHHHH-HCCSCSSSCCEEEEESCHHHHHHHHHTTCEETTSCCC-----------C---CCCEEEEEECCCT
T ss_pred EEcHHHHHHHHHHh-hCCccccCCCeEEEECCHHHHHHHHHCCCEeeccccc-----------ccccCCCCCEEEEeCCC
Confidence 99999999999976 221 135799999999999999999876532110 01113456788899999
Q ss_pred CCCHHHHHHHHHHHHcCCCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCC
Q 022007 164 HINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASS 243 (304)
Q Consensus 164 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~ 243 (304)
...|+++.+.+..|++. +..+++||++..........+...|.+..+|+.+++.+....+||+|.+|+.+++++|++|+
T Consensus 155 ~~~~~~~~~~l~~l~~~-g~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~~ 233 (306)
T 2oyc_A 155 HFSFAKLREACAHLRDP-ECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPA 233 (306)
T ss_dssp TCCHHHHHHHHHHHTST-TSEEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCGG
T ss_pred CCCHHHHHHHHHHHHcC-CCEEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCChH
Confidence 99999999999999876 67889999988544222234566777889999999999999999999999999999999999
Q ss_pred cEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCC----CCCCCCCcEEECCHHHHHHhhh
Q 022007 244 RMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQD----PSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 244 ~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~----~~~~~~pd~v~~~l~el~~~l~ 303 (304)
+++||||++.+||+||+++|+++++|.+|.+..+++.. ......|+++++++.|+.++++
T Consensus 234 e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~l~ 297 (306)
T 2oyc_A 234 RTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLE 297 (306)
T ss_dssp GEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGGGC-
T ss_pred HEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHHHHH
Confidence 99999999559999999999999999999876544321 0112479999999999988775
No 4
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=100.00 E-value=5.1e-37 Score=267.44 Aligned_cols=258 Identities=37% Similarity=0.661 Sum_probs=220.3
Q ss_pred cCEEEEeE--EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHHHHHHHHHhC
Q 022007 25 VDAFLFDC--VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSFAAAMYLKVN 102 (304)
Q Consensus 25 ~k~i~fDi--tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~~l~~~ 102 (304)
+|+|+||+ ||+++...+|++.++|++|+++|++++++||++.++...+.++|+++|++...++++++......|+++.
T Consensus 1 ik~i~~D~DGtL~~~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~~~~~~~l~~~ 80 (263)
T 1zjj_A 1 MVAIIFDMDGVLYRGNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSGLATRLYMSKH 80 (263)
T ss_dssp CEEEEEECBTTTEETTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHHHHHHHH
T ss_pred CeEEEEeCcCceEeCCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecHHHHHHHHHHh
Confidence 47899999 9999998889999999999999999999999999999999999999999988899999999999999875
Q ss_pred CCCCCCeEEEEcChhHHHHHHHcCCcccC-CCCCcchhhhhccccccccCCCccEEEEecCCCCCHHHHHHHHHHHHcCC
Q 022007 103 NFPQENKVYVIGGEGILEELRQAGYTGLG-GPEDGEKRVQLKSNCLFEHDKNVGAVVVGLDPHINYYKLQYGTLCIRENP 181 (304)
Q Consensus 103 ~~~~~~~v~~~g~~~~~~~l~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~l~~~~ 181 (304)
. +..+++++|...+.+.+++.|++... ..++ .....++++|+.+++....|+++.++++.|+ +
T Consensus 81 ~--~~~~v~viG~~~l~~~l~~~G~~~~~~~~~~------------~~~~~~~~~v~~g~~~~~~~~~~~~~l~~L~-~- 144 (263)
T 1zjj_A 81 L--DPGKIFVIGGEGLVKEMQALGWGIVTLDEAR------------QGSWKEVKHVVVGLDPDLTYEKLKYATLAIR-N- 144 (263)
T ss_dssp S--CCCCEEEESCHHHHHHHHHHTSCBCCHHHHH------------TTGGGGCCEEEECCCTTCBHHHHHHHHHHHH-T-
T ss_pred C--CCCEEEEEcCHHHHHHHHHcCCeeccCCccc------------ccccCCCCEEEEecCCCCCHHHHHHHHHHHH-C-
Confidence 3 23679999999999999999987642 0000 0001236899999999999999999999998 4
Q ss_pred CceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHH
Q 022007 182 GCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQN 261 (304)
Q Consensus 182 ~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~ 261 (304)
|.++++||++...+.. ...+++.+++..+|+.+++.+....+||+|.+|+.++++ ++|++++||||++.+||.+|++
T Consensus 145 g~~~i~tn~~~~~~~~-~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~ 221 (263)
T 1zjj_A 145 GATFIGTNPDATLPGE-EGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGEELWMVGDRLDTDIAFAKK 221 (263)
T ss_dssp TCEEEESCCCSEEEET-TEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTCEEEEEESCTTTHHHHHHH
T ss_pred CCEEEEECCCccccCC-CCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCcccEEEECCChHHHHHHHHH
Confidence 8888999999854421 234566688999999999999999999999999999999 9999999999996699999999
Q ss_pred cCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 262 AGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 262 aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
+||++++|.+|.+..+++.. ....|+++++++.|+.++|.
T Consensus 222 aG~~~i~v~~g~~~~~~~~~--~~~~p~~~~~~l~el~~~l~ 261 (263)
T 1zjj_A 222 FGMKAIMVLTGVSSLEDIKK--SEYKPDLVLPSVYELIDYLK 261 (263)
T ss_dssp TTCEEEEESSSSCCHHHHTT--CSSCCSEEESSGGGGGGGGC
T ss_pred cCCeEEEECCCCCChHHHHh--cCCCCCEEECCHHHHHHHHh
Confidence 99999999999887655542 12379999999999998875
No 5
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=100.00 E-value=8.1e-37 Score=266.42 Aligned_cols=258 Identities=34% Similarity=0.531 Sum_probs=222.3
Q ss_pred hhccCEEEEeE--EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHHHHHHHH
Q 022007 22 FDSVDAFLFDC--VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSFAAAMYL 99 (304)
Q Consensus 22 ~~~~k~i~fDi--tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~~l 99 (304)
+.++|+|+||+ |||++++++|++.+||++|+++|++++++||++.|+...+.+.++.+|++...++++++......++
T Consensus 5 m~~~kli~~DlDGTLl~~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~~~ii~~~~~~~~~~ 84 (268)
T 3qgm_A 5 MPDKKGYIIDIDGVIGKSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILVATYATARFI 84 (268)
T ss_dssp -CCCSEEEEECBTTTEETTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCGGGEEEHHHHHHHHH
T ss_pred cccCCEEEEcCcCcEECCCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCHHHeeCHHHHHHHHH
Confidence 45799999999 9999999999999999999999999999999999999999999999999988899999999988888
Q ss_pred HhCCCCCCCeEEEEcChhHHHHHHHcCCcccCCCCCcchhhhhccccccccCCCccEEEEecCCCCCHHHHHHHHHHHHc
Q 022007 100 KVNNFPQENKVYVIGGEGILEELRQAGYTGLGGPEDGEKRVQLKSNCLFEHDKNVGAVVVGLDPHINYYKLQYGTLCIRE 179 (304)
Q Consensus 100 ~~~~~~~~~~v~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~l~~ 179 (304)
..... ..++++++...+...+.+.|+.... ...+++++.+.+..+.|+.+...+..++.
T Consensus 85 ~~~~~--~~~~~~~~~~~l~~~~~~~g~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 143 (268)
T 3qgm_A 85 AREKP--NAKVFTTGEEGLIEELRLAGLEIVD-------------------YDEAEYLVVGSNRKINFELMTKALRACLR 143 (268)
T ss_dssp HHHST--TCEEEECCCHHHHHHHHHTTCEECC-------------------TTTCSEEEECCCTTCBHHHHHHHHHHHHH
T ss_pred HhhCC--CCeEEEEcCHHHHHHHHHcCCeecC-------------------CCCCCEEEEecCCCCCHHHHHHHHHHHhC
Confidence 76532 3679999999999999999987642 33567888888888999999998888876
Q ss_pred CCCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCC-cccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHH
Q 022007 180 NPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEP-IVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILF 258 (304)
Q Consensus 180 ~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~-~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~ 258 (304)
+..++++|++...+.. ....++.+.+...++.+++.+. ...+||+|.+|+.+++++|+++++++||||++.+|+.|
T Consensus 144 --~~~~i~~n~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~ 220 (268)
T 3qgm_A 144 --GIRYIATNPDRIFPAE-DGPIPGTGMIIGALYWMTGREPDVVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAA 220 (268)
T ss_dssp --TCEEEESCCCCEEEET-TEEEECTHHHHHHHHHHHSCCCSEECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHH
T ss_pred --CCcEEEEeCCCcccCC-CCceeChHHHHHHHHHHhCCCcceecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHH
Confidence 7889999998854432 2356677888899999999999 99999999999999999999999999999996699999
Q ss_pred HHHcCCeEEEEccCCCCccccCCC--CCCCCCcEEECCHHHHHHhhh
Q 022007 259 GQNAGCKTLLVLSGVTTQSTLQDP--SNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 259 a~~aG~~ti~V~~G~~~~~~~~~~--~~~~~pd~v~~~l~el~~~l~ 303 (304)
|+++|+++++|.+|++..+++... .....||++++++.||.++|+
T Consensus 221 ~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el~~~l~ 267 (268)
T 3qgm_A 221 GKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDMVEALE 267 (268)
T ss_dssp HHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHHHHTC-
T ss_pred HHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHHHHHHh
Confidence 999999999999999876654300 011369999999999999875
No 6
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=100.00 E-value=6.3e-37 Score=269.63 Aligned_cols=269 Identities=25% Similarity=0.330 Sum_probs=218.1
Q ss_pred hhhHHHhhhccCEEEEeE--EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc-cCCCCeech
Q 022007 15 ANNITALFDSVDAFLFDC--VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS-VSEDEIFSS 91 (304)
Q Consensus 15 ~~~~~~~~~~~k~i~fDi--tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~-~~~~~i~~~ 91 (304)
.+++.++++++|+|+||+ ||+++..++|++.++|++|+++|++++++||+++|+...+.+.++++|++ ...++++++
T Consensus 4 ~~~~~~~~~~~k~i~~D~DGtL~~~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~ii~~ 83 (284)
T 2hx1_A 4 IESFKSLLPKYKCIFFDAFGVLKTYNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKIISS 83 (284)
T ss_dssp BCCHHHHGGGCSEEEECSBTTTEETTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGGEEEH
T ss_pred HHHHHHHHhcCCEEEEcCcCCcCcCCeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhhEEcH
Confidence 567888999999999999 99999999999999999999999999999999999999999999999999 888999999
Q ss_pred HHHHHHHHHhCCCCCCCeEE-EEcChhHHHHHHHcCCcccCCCCCcchhhhhccccccccCCCccEEEEecCCCCCHH-H
Q 022007 92 SFAAAMYLKVNNFPQENKVY-VIGGEGILEELRQAGYTGLGGPEDGEKRVQLKSNCLFEHDKNVGAVVVGLDPHINYY-K 169 (304)
Q Consensus 92 ~~~~~~~l~~~~~~~~~~v~-~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~ 169 (304)
......|+.+. . +. +++ ++|...+.+.+++.|+........ ......++++|+.+.+..+.+. .
T Consensus 84 ~~~~~~~l~~~-~-~~-~v~~~lg~~~l~~~l~~~G~~~~~~~~~-----------~~~~~~~~~avv~~~~~~~~~~~~ 149 (284)
T 2hx1_A 84 GMITKEYIDLK-V-DG-GIVAYLGTANSANYLVSDGIKMLPVSAI-----------DDSNIGEVNALVLLDDEGFNWFHD 149 (284)
T ss_dssp HHHHHHHHHHH-C-CS-EEEEEESCHHHHHTTCBTTEEEEEGGGC-----------CTTTGGGEEEEEECCSSSSCHHHH
T ss_pred HHHHHHHHHhh-c-CC-cEEEEecCHHHHHHHHHCCCeeccCCCC-----------CcccCCCCCEEEEeCCCCcCcccc
Confidence 99999999763 2 33 799 999999999999889865410000 0000135688999988877433 2
Q ss_pred HHHHHHHHHcCCCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHc----CCCCCcE
Q 022007 170 LQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKF----QIASSRM 245 (304)
Q Consensus 170 ~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~l----g~~~~~~ 245 (304)
....++.|+++ |.++++||++..........+++.+++..+|+.+++.+....+||+|++|+.+++++ |++|+++
T Consensus 150 ~~~l~~~L~~~-g~~~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~~~ 228 (284)
T 2hx1_A 150 LNKTVNLLRKR-TIPAIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKREI 228 (284)
T ss_dssp HHHHHHHHHHC-CCCEEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGGGE
T ss_pred HHHHHHHHhcC-CCeEEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcceE
Confidence 33334467666 777999999885440111244677889999999999999999999999999999999 9999999
Q ss_pred EEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCC--CCCCCCcEEECCHHHH
Q 022007 246 CMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDP--SNNIQPDYYTNQVSDI 298 (304)
Q Consensus 246 ~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~--~~~~~pd~v~~~l~el 298 (304)
+||||++.+||.+|+++||++++|.+|.+..+++... .....||++++++.|+
T Consensus 229 ~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 229 LMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp EEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred EEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 9999996699999999999999999998876554300 0113799999999875
No 7
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=100.00 E-value=3.4e-36 Score=262.28 Aligned_cols=253 Identities=33% Similarity=0.542 Sum_probs=215.5
Q ss_pred hccCEEEEeE--EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHHHHHHHHH
Q 022007 23 DSVDAFLFDC--VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSFAAAMYLK 100 (304)
Q Consensus 23 ~~~k~i~fDi--tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~~l~ 100 (304)
.++|+|+||+ ||+++.+++|++++||++|+++|++++++||+++|+...+.+.++++|+++..+.++++......++.
T Consensus 4 ~~~kli~~DlDGTLl~~~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~~ii~~~~~~~~~~~ 83 (266)
T 3pdw_A 4 KTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVFTTSMATAQHIA 83 (266)
T ss_dssp CCCSEEEEECSSSTTCHHHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCGGGEEEHHHHHHHHHH
T ss_pred ccCCEEEEeCcCceEeCCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHHHccCHHHHHHHHHH
Confidence 4699999999 99998889999999999999999999999999999999999999999999988999999999888887
Q ss_pred hCCCCCCCeEEEEcChhHHHHHHHcCCcccCCCCCcchhhhhccccccccCCCccEEEEecCCCCCHHHHHHHHHHHHcC
Q 022007 101 VNNFPQENKVYVIGGEGILEELRQAGYTGLGGPEDGEKRVQLKSNCLFEHDKNVGAVVVGLDPHINYYKLQYGTLCIREN 180 (304)
Q Consensus 101 ~~~~~~~~~v~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~l~~~ 180 (304)
.... ..+++..+...+.+.+.+.|+... ....+.++.+.+....|+.+...+..++.
T Consensus 84 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 140 (266)
T 3pdw_A 84 QQKK--DASVYVIGEEGIRQAIEENGLTFG--------------------GENADFVVVGIDRSITYEKFAVGCLAIRN- 140 (266)
T ss_dssp HHCT--TCEEEEESCHHHHHHHHHTTCEEC--------------------CTTCSEEEECCCTTCCHHHHHHHHHHHHT-
T ss_pred hhCC--CCEEEEEeChhHHHHHHHcCCccC--------------------CCCCCEEEEeCCCCCCHHHHHHHHHHHHC-
Confidence 6432 367899999999999999998764 23457888888888999999998888875
Q ss_pred CCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHH
Q 022007 181 PGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQ 260 (304)
Q Consensus 181 ~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~ 260 (304)
+.+++++|++..... .....++.+.+...|+.+++.+....+||+|.+|+.+++++|+++++++||||++.+|+.||+
T Consensus 141 -~~~~i~~n~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~ 218 (266)
T 3pdw_A 141 -GARFISTNGDIAIPT-ERGLLPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGI 218 (266)
T ss_dssp -TCEEEESCCCCEEEE-TTEEEECHHHHHHHHHHHHCCCCEECSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHH
T ss_pred -CCeEEEEcCCceeEC-CCceEecchHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHH
Confidence 778999999884432 223456677889999999999999999999999999999999999999999999779999999
Q ss_pred HcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhh
Q 022007 261 NAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELL 302 (304)
Q Consensus 261 ~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l 302 (304)
++|+.+++|.||++..+++.. ....|||+++++.||.+-+
T Consensus 219 ~aG~~~~~v~~g~~~~~~~~~--~~~~~d~v~~~~~el~~~~ 258 (266)
T 3pdw_A 219 NAGMDTLLVHTGVTKREHMTD--DMEKPTHAIDSLTEWIPYI 258 (266)
T ss_dssp HHTCEEEEECCC------CCT--TSCCCSEEESSGGGGHHHH
T ss_pred HCCCeEEEECCCCCChHHHHh--cCCCCCEEeCCHHHHHHHh
Confidence 999999999999987766553 1236999999999998754
No 8
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=100.00 E-value=7.6e-34 Score=247.85 Aligned_cols=257 Identities=29% Similarity=0.537 Sum_probs=217.8
Q ss_pred HhhhccCEEEEeE--EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHHHHHH
Q 022007 20 ALFDSVDAFLFDC--VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSFAAAM 97 (304)
Q Consensus 20 ~~~~~~k~i~fDi--tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~ 97 (304)
..+.++++|+||+ ||+++.+++|++.++|++|+++|++++++||+++|+...+.+.++.+|++...++++++......
T Consensus 12 ~~~~~~~~v~~DlDGTLl~~~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii~~~~~~~~ 91 (271)
T 1vjr_A 12 HVLDKIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEITAE 91 (271)
T ss_dssp CGGGGCCEEEECCBTTTEETTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEEHHHHHHH
T ss_pred ccccCCCEEEEcCcCcEEeCCEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEEcHHHHHHH
Confidence 4678999999999 99999999999999999999999999999999999999999999999999888899999888777
Q ss_pred HHHhCCCCCCCeEEEEcChhHHHHHHHcCCcccCCCCCcchhhhhccccccccCCCccEEEEecCCCCCHHHHHHHHHHH
Q 022007 98 YLKVNNFPQENKVYVIGGEGILEELRQAGYTGLGGPEDGEKRVQLKSNCLFEHDKNVGAVVVGLDPHINYYKLQYGTLCI 177 (304)
Q Consensus 98 ~l~~~~~~~~~~v~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~l 177 (304)
++.+.. ....++..+...+.+.+++.|+... ....++++.+......|+++.+.+..+
T Consensus 92 ~~~~~~--~~~~~~~~~~~~~~~~l~~~g~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~l~~l 149 (271)
T 1vjr_A 92 HMLKRF--GRCRIFLLGTPQLKKVFEAYGHVID--------------------EENPDFVVLGFDKTLTYERLKKACILL 149 (271)
T ss_dssp HHHHHH--CSCEEEEESCHHHHHHHHHTTCEEC--------------------SSSCSEEEECCCTTCCHHHHHHHHHHH
T ss_pred HHHHhC--CCCeEEEEcCHHHHHHHHHcCCccC--------------------CCCCCEEEEeCCCCcCHHHHHHHHHHH
Confidence 776531 2357899999999999999887663 123467778877788999999999888
Q ss_pred HcCCCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCC-cccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhH
Q 022007 178 RENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEP-IVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDI 256 (304)
Q Consensus 178 ~~~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~-~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di 256 (304)
.. +.++++||++...... ....+..+++..+|+.+++.+. ...+||+|.+|+.+++++|++|++++||||++.+|+
T Consensus 150 -~~-~~~~i~tn~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~e~i~iGD~~~nDi 226 (271)
T 1vjr_A 150 -RK-GKFYIATHPDINCPSK-EGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDV 226 (271)
T ss_dssp -TT-TCEEEESCCCSEECCT-TSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHH
T ss_pred -HC-CCeEEEECCCccccCC-CCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCceEEEECCCcHHHH
Confidence 44 7888999988744332 2245666778889999999998 999999999999999999999999999999944999
Q ss_pred HHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 257 LFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 257 ~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
+||+++|+.+++|.+|....+++.. ....|+++++++.|+.++|+
T Consensus 227 ~~a~~aG~~~i~v~~g~~~~~~~~~--~~~~~~~~i~~l~el~~~l~ 271 (271)
T 1vjr_A 227 KLGKNAGIVSILVLTGETTPEDLER--AETKPDFVFKNLGELAKAVQ 271 (271)
T ss_dssp HHHHHHTCEEEEESSSSCCHHHHHH--CSSCCSEEESSHHHHHHHHC
T ss_pred HHHHHcCCeEEEECCCCCCHHHHhh--cCCCCCEEECCHHHHHHHhC
Confidence 9999999999999999876554431 11379999999999998874
No 9
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=100.00 E-value=9.4e-34 Score=246.45 Aligned_cols=250 Identities=30% Similarity=0.512 Sum_probs=216.6
Q ss_pred hccCEEEEeE--EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHh-CCCccCCCCeechHHHHHHHH
Q 022007 23 DSVDAFLFDC--VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHS-LGVSVSEDEIFSSSFAAAMYL 99 (304)
Q Consensus 23 ~~~k~i~fDi--tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~-lG~~~~~~~i~~~~~~~~~~l 99 (304)
..+|+|+||+ ||+++...++++.++++.|+++|++++++||++.++...+.+.|.+ +|++...++++++......|+
T Consensus 3 ~~~k~v~fDlDGTL~~~~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 82 (264)
T 1yv9_A 3 LDYQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYTATLATIDYM 82 (264)
T ss_dssp CSCCEEEECCBTTTEETTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEEHHHHHHHHH
T ss_pred ccCCEEEEeCCCeEEeCCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCChhhEEcHHHHHHHHH
Confidence 3589999999 9999998889999999999999999999999999999999999988 999988899999998888888
Q ss_pred HhCCCCCCCeEEEEcChhHHHHHHHcCCcccCCCCCcchhhhhccccccccCCCccEEEEecCCCCCHHHHHHHHHHHHc
Q 022007 100 KVNNFPQENKVYVIGGEGILEELRQAGYTGLGGPEDGEKRVQLKSNCLFEHDKNVGAVVVGLDPHINYYKLQYGTLCIRE 179 (304)
Q Consensus 100 ~~~~~~~~~~v~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~l~~ 179 (304)
.+.. +...++..|...+.+.+++.|+... ....++++.+.+....|+++.++++.|+
T Consensus 83 ~~~~--~~~~~~~~g~~~l~~~l~~~g~~~~--------------------~~~~~~v~~~~~~~~~~~~~~~~l~~l~- 139 (264)
T 1yv9_A 83 KEAN--RGKKVFVIGEAGLIDLILEAGFEWD--------------------ETNPDYVVVGLDTELSYEKVVLATLAIQ- 139 (264)
T ss_dssp HHHC--CCSEEEEESCHHHHHHHHHTTCEEC--------------------SSSCSEEEECCCTTCCHHHHHHHHHHHH-
T ss_pred HhhC--CCCEEEEEeCHHHHHHHHHcCCccc--------------------CCCCCEEEEECCCCcCHHHHHHHHHHHh-
Confidence 7652 3467999999999999999998774 2245788888888899999999999997
Q ss_pred CCCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHH
Q 022007 180 NPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFG 259 (304)
Q Consensus 180 ~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a 259 (304)
+ +.++++||++...+.. ...+++.+++..+|+.+++.+....+||+|.+|+.+++++|++|++++||||++.+|+.+|
T Consensus 140 ~-g~~~i~tn~~~~~~~~-~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a 217 (264)
T 1yv9_A 140 K-GALFIGTNPDKNIPTE-RGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSG 217 (264)
T ss_dssp T-TCEEEESCCCSEEEET-TEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHH
T ss_pred C-CCEEEEECCCCcccCC-CCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHH
Confidence 4 8888999988843221 2235677889999999999999999999999999999999999999999999966999999
Q ss_pred HHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHH
Q 022007 260 QNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDIL 299 (304)
Q Consensus 260 ~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~ 299 (304)
+++||++++|.+|++..+++.. ....||++++++.|+.
T Consensus 218 ~~aG~~~i~v~~g~~~~~~l~~--~~~~~d~v~~~l~el~ 255 (264)
T 1yv9_A 218 IQNGIDSLLVTSGFTPKSAVPT--LPTPPTYVVDSLDEWT 255 (264)
T ss_dssp HHHTCEEEEETTSSSCSSSTTT--CSSCCSEEESSGGGCC
T ss_pred HHcCCcEEEECCCCCCHHHHHh--cCCCCCEEEecHHHHh
Confidence 9999999999999987655542 1237999999999875
No 10
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=99.98 E-value=8.2e-31 Score=226.56 Aligned_cols=249 Identities=23% Similarity=0.305 Sum_probs=196.8
Q ss_pred hhccCEEEEeE--EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHHHHHHHH
Q 022007 22 FDSVDAFLFDC--VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSFAAAMYL 99 (304)
Q Consensus 22 ~~~~k~i~fDi--tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~~l 99 (304)
+..+|+|+||+ ||+++...++++.++++.|+++|++++++||+++++...+.+.++++|++...++++++......++
T Consensus 4 ~~~ik~i~fDlDGTLld~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 83 (259)
T 2ho4_A 4 RRALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEISEDEIFTSLTAARNLI 83 (259)
T ss_dssp --CCCEEEEESSSSSCC---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCCCGGGEEEHHHHHHHHH
T ss_pred hhhCCEEEEeCcCcEEeCCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCccHHHeecHHHHHHHHH
Confidence 45799999999 9999999999999999999999999999999999999999999999999988889999988888788
Q ss_pred HhCCCCCCCeEEEEcChhHHHHHHHcCCcccCCCCCcchhhhhccccccccCCCccEEEEec-CCCCCHHHHHHHHHHHH
Q 022007 100 KVNNFPQENKVYVIGGEGILEELRQAGYTGLGGPEDGEKRVQLKSNCLFEHDKNVGAVVVGL-DPHINYYKLQYGTLCIR 178 (304)
Q Consensus 100 ~~~~~~~~~~v~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~l~~l~ 178 (304)
...... ++.++...+.+.+...+. ...++++.+. ...+.|+++.+.+..++
T Consensus 84 ~~~~~~----~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 135 (259)
T 2ho4_A 84 EQKQVR----PMLLLDDRALPEFTGVQT------------------------QDPNAVVIGLAPEHFHYQLLNQAFRLLL 135 (259)
T ss_dssp HHHTCC----EEEESCGGGGGGGTTCCC------------------------SSCCEEEECCCGGGCBHHHHHHHHHHHH
T ss_pred HHcCCe----EEEEeCHHHHHHHHHcCC------------------------CCCCEEEEecCCCCCCHHHHHHHHHHHH
Confidence 765443 778888777666654332 1234666654 34567999999999998
Q ss_pred cCCCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHH
Q 022007 179 ENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILF 258 (304)
Q Consensus 179 ~~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~ 258 (304)
+ +.++++||.+...... .....+.+.+...+..+++.+....+||+|.+|+.+++++|++|++|+||||++.+|+.|
T Consensus 136 -~-~~~~i~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~ 212 (259)
T 2ho4_A 136 -D-GAPLIAIHKARYYKRK-DGLALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDG 212 (259)
T ss_dssp -T-TCCEEESCCCSEEEET-TEEEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHH
T ss_pred -C-CCEEEEECCCCcCccc-CCcccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHH
Confidence 4 7777999988744322 223455555555556788889999999999999999999999999999999993399999
Q ss_pred HHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 259 GQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 259 a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
|+++|+++++|.+|.....+... ....|+++++++.|+.++|.
T Consensus 213 a~~aG~~~i~v~~g~~~~~~~~~--~~~~~~~~~~~l~~l~~~l~ 255 (259)
T 2ho4_A 213 AQNIGMLGILVKTGKYKAADEEK--INPPPYLTCESFPHAVDHIL 255 (259)
T ss_dssp HHHTTCEEEEESSTTCCTTGGGG--SSSCCSEEESCHHHHHHHHH
T ss_pred HHHCCCcEEEECCCCCCcccccc--cCCCCCEEECCHHHHHHHHH
Confidence 99999999999999644333210 12479999999999998764
No 11
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=99.97 E-value=1.5e-28 Score=210.03 Aligned_cols=245 Identities=29% Similarity=0.499 Sum_probs=200.1
Q ss_pred ccCEEEEeE--EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHHHHHHHHHh
Q 022007 24 SVDAFLFDC--VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSFAAAMYLKV 101 (304)
Q Consensus 24 ~~k~i~fDi--tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~~l~~ 101 (304)
.+|+|+||+ ||+++...++.+.++++.|++.|+++.++||.++|+...+.+.+.++|++...+.++.+......|...
T Consensus 2 ~~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T 2c4n_A 2 TIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRR 81 (250)
T ss_dssp CCCEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCCGGGEEEHHHHHHHHHHT
T ss_pred CccEEEEcCcceEEeCCEeCcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcHHHHHHHHHHh
Confidence 379999999 999999888888999999999999999999999999999999999999987777788877656666654
Q ss_pred CCCCCCCeEEEEcChhHHHHHHHcCCcccCCCCCcchhhhhccccccccCCCccEEEEecCCCCCHHHHHHHHHHHHcCC
Q 022007 102 NNFPQENKVYVIGGEGILEELRQAGYTGLGGPEDGEKRVQLKSNCLFEHDKNVGAVVVGLDPHINYYKLQYGTLCIRENP 181 (304)
Q Consensus 102 ~~~~~~~~v~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~l~~~~ 181 (304)
. ........|...+.+.+++.|+.+.. ...++++.+.+..+.|..+......+..
T Consensus 82 ~---~~~~~~~~~~~~~l~~l~~~g~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 136 (250)
T 2c4n_A 82 Q---EGKKAYVVGEGALIHELYKAGFTITD--------------------VNPDFVIVGETRSYNWDMMHKAAYFVAN-- 136 (250)
T ss_dssp S---SCCEEEEECCTHHHHHHHHTTCEECS--------------------SSCSEEEECCCTTCCHHHHHHHHHHHHT--
T ss_pred c---CCCEEEEEcCHHHHHHHHHcCCcccC--------------------CCCCEEEEeCCCCCCHHHHHHHHHHHHC--
Confidence 2 12456778888899999999887641 2346778887788888888777666553
Q ss_pred CceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHH
Q 022007 182 GCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQN 261 (304)
Q Consensus 182 ~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~ 261 (304)
++.+++||.+ .. ........+.+...++...+.+....+||+|.+|+.+++++|++|+++++|||++.+|++||+.
T Consensus 137 ~~~~i~t~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~ 212 (250)
T 2c4n_A 137 GARFIATNPD-TH---GRGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQ 212 (250)
T ss_dssp TCEEEESCCC-SB---SSTTCBCHHHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHH
T ss_pred CCEEEEECCC-CC---CCCeeecchHHHHHHHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHH
Confidence 7788899977 22 1223445555777888888999999999999999999999999999999999995599999999
Q ss_pred cCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHH
Q 022007 262 AGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDIL 299 (304)
Q Consensus 262 aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~ 299 (304)
+|+.+++|.+|++..+++.. ....|+++++++.|+.
T Consensus 213 aG~~~~~v~~g~~~~~~~~~--~~~~~~~v~~~~~el~ 248 (250)
T 2c4n_A 213 AGLETILVLSGVSSLDDIDS--MPFRPSWIYPSVAEID 248 (250)
T ss_dssp TTCEEEEESSSSCCGGGGSS--CSSCCSEEESSGGGCC
T ss_pred cCCeEEEECCCCCChhhhhh--cCCCCCEEECCHHHhh
Confidence 99999999999987655542 1247999999999875
No 12
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=99.96 E-value=1.4e-27 Score=206.97 Aligned_cols=252 Identities=22% Similarity=0.303 Sum_probs=193.5
Q ss_pred HhhhccCEEEEeE--EEEc----CCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHH
Q 022007 20 ALFDSVDAFLFDC--VIWK----GDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSF 93 (304)
Q Consensus 20 ~~~~~~k~i~fDi--tL~~----~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~ 93 (304)
..+..+|+|+||+ ||++ +..+++++.++++.|+++|+++.++||+++|+...+.+.+.++|++...+.++....
T Consensus 7 ~~m~~~k~i~fDlDGTLl~s~~~~~~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~~~~~~~~~~~ 86 (271)
T 2x4d_A 7 KRLAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDISEQEVTAPAP 86 (271)
T ss_dssp HHTTTCCEEEECCBTTTEECCTTTCEECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCCCGGGEECHHH
T ss_pred HHHhcCCEEEEeCCCeEEecCCCCCccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCCCHHHeecHHH
Confidence 3456799999999 9998 456889999999999999999999999999999999999999999887788888877
Q ss_pred HHHHHHHhCCCCCCCeEEEEcChhHHHHHHHcCCcccCCCCCcchhhhhccccccccCCCccEEEEe-cCCCCCHHHHHH
Q 022007 94 AAAMYLKVNNFPQENKVYVIGGEGILEELRQAGYTGLGGPEDGEKRVQLKSNCLFEHDKNVGAVVVG-LDPHINYYKLQY 172 (304)
Q Consensus 94 ~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~ 172 (304)
....++...... .+..+.++..+.+..... ..+..++.+ ....+.|+.+..
T Consensus 87 ~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~ 138 (271)
T 2x4d_A 87 AACQILKERGLR----PYLLIHDGVRSEFDQIDT------------------------SNPNCVVIADAGESFSYQNMNN 138 (271)
T ss_dssp HHHHHHHHHTCC----EEEECCGGGGGGGTTSCC------------------------SSCSEEEECCCGGGCCHHHHHH
T ss_pred HHHHHHHHcCCE----EEEEeCHHHHHHHHHcCC------------------------CCCCEEEEecCCCCcCHHHHHH
Confidence 766666654433 556666666555543321 123344443 344567888888
Q ss_pred HHHHHHcCCCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCc
Q 022007 173 GTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRL 252 (304)
Q Consensus 173 ~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~ 252 (304)
.+..+++.++.+++++|.+..... ......+.+.+...++...+.+....+||+|.+|+.+++++|++++++++|||+
T Consensus 139 ~l~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~- 216 (271)
T 2x4d_A 139 AFQVLMELEKPVLISLGKGRYYAA-TSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDD- 216 (271)
T ss_dssp HHHHHHHCSSCCEEEECCCSEEEE-TTEEEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGGEEEEESC-
T ss_pred HHHHHHhcCCCeEEEEcCCccccc-CCCcccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcceEEEECCC-
Confidence 888888755677788887663322 222334445555555667788889999999999999999999999999999999
Q ss_pred h-hhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 253 D-TDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 253 ~-~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
. +|+.||+++|+.+++|.+|.....+... ....|+++++++.|+.++|.
T Consensus 217 ~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~--~~~~~~~~~~~~~el~~~l~ 266 (271)
T 2x4d_A 217 IVGDVGGAQRCGMRALQVRTGKFRPSDEHH--PEVKADGYVDNLAEAVDLLL 266 (271)
T ss_dssp TTTTHHHHHHTTCEEEEESSTTCCGGGGGC--SSCCCSEEESSHHHHHHHHH
T ss_pred cHHHHHHHHHCCCcEEEEcCCCCCchhhcc--cCCCCCEEeCCHHHHHHHHH
Confidence 6 9999999999999999999654333221 12469999999999998774
No 13
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=99.86 E-value=3.2e-21 Score=157.51 Aligned_cols=81 Identities=20% Similarity=0.257 Sum_probs=70.2
Q ss_pred CcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHH
Q 022007 220 PIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDIL 299 (304)
Q Consensus 220 ~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~ 299 (304)
....+||+|++|+.+++++|++|++++||||+ .+|+++|+++||++++|.+|++..+.+.. ....|+++++++.|+.
T Consensus 96 ~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~-~~Di~~a~~aG~~~i~v~~g~~~~~~~~~--~~~~~d~v~~~l~el~ 172 (179)
T 3l8h_A 96 GCACRKPLPGMYRDIARRYDVDLAGVPAVGDS-LRDLQAAAQAGCAPWLVQTGNGRKTLAQG--GLPEGTRVCEDLAAVA 172 (179)
T ss_dssp CCSSSTTSSHHHHHHHHHHTCCCTTCEEEESS-HHHHHHHHHHTCEEEEESTTTHHHHHHHC--CCCTTEEEESSHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHcCCCHHHEEEECCC-HHHHHHHHHCCCcEEEECCCCcchhhhhc--ccCCCcEEecCHHHHH
Confidence 34568999999999999999999999999999 79999999999999999999876554421 0137999999999999
Q ss_pred Hhhh
Q 022007 300 ELLG 303 (304)
Q Consensus 300 ~~l~ 303 (304)
++|.
T Consensus 173 ~~l~ 176 (179)
T 3l8h_A 173 EQLL 176 (179)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9874
No 14
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=99.85 E-value=4.9e-21 Score=161.00 Aligned_cols=79 Identities=22% Similarity=0.253 Sum_probs=69.0
Q ss_pred CCcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeE-EEEccCCCCccccCCCCCCCCCcEEECCHHH
Q 022007 219 EPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKT-LLVLSGVTTQSTLQDPSNNIQPDYYTNQVSD 297 (304)
Q Consensus 219 ~~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~t-i~V~~G~~~~~~~~~~~~~~~pd~v~~~l~e 297 (304)
+....+||+|.+|+.+++++|++|++++||||+ .+|+.+|+++||++ ++|.+|....+... ..|+++++++.|
T Consensus 125 ~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~-~~Di~~a~~aG~~~~i~v~~g~~~~~~~~-----~~~d~vi~~l~e 198 (211)
T 2gmw_A 125 QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDK-LEDMQAAVAANVGTKVLVRTGKPITPEAE-----NAADWVLNSLAD 198 (211)
T ss_dssp SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESS-HHHHHHHHHTTCSEEEEESSSSCCCHHHH-----HHCSEEESCGGG
T ss_pred ccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCC-HHHHHHHHHCCCceEEEEecCCCcccccc-----CCCCEEeCCHHH
Confidence 345679999999999999999999999999999 69999999999999 99999986543222 269999999999
Q ss_pred HHHhhh
Q 022007 298 ILELLG 303 (304)
Q Consensus 298 l~~~l~ 303 (304)
+.++|.
T Consensus 199 l~~~l~ 204 (211)
T 2gmw_A 199 LPQAIK 204 (211)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998875
No 15
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=99.85 E-value=1.6e-20 Score=154.97 Aligned_cols=78 Identities=21% Similarity=0.361 Sum_probs=66.9
Q ss_pred ccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCc--cccCCCCCCCCCcEEEC--CHHH
Q 022007 222 VVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQ--STLQDPSNNIQPDYYTN--QVSD 297 (304)
Q Consensus 222 ~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~--~~~~~~~~~~~pd~v~~--~l~e 297 (304)
..+||+|++|+.+++++|++|++++||||++.+|+.+|+++||++++|.+|.... +.+. ...|+++++ ++.+
T Consensus 94 ~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~----~~~~~~v~~~~~l~~ 169 (189)
T 3ib6_A 94 KMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLP----LVAPPFVIPVWDLAD 169 (189)
T ss_dssp CCCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCC----BCSSSCEEEESSGGG
T ss_pred CCCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccc----cCCCcceeccccHHh
Confidence 3589999999999999999999999999996699999999999999999987532 2222 147999999 9999
Q ss_pred HHHhhh
Q 022007 298 ILELLG 303 (304)
Q Consensus 298 l~~~l~ 303 (304)
+.++|.
T Consensus 170 l~~~l~ 175 (189)
T 3ib6_A 170 VPEALL 175 (189)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998764
No 16
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=99.82 E-value=8e-20 Score=151.85 Aligned_cols=77 Identities=13% Similarity=0.098 Sum_probs=65.2
Q ss_pred ccCCCcHHHHHHHHHHcCCCC-CcEEEEcCCchhhHHHHHHcCCeEEEEccCCCC-----------------------cc
Q 022007 222 VVGKPSTFMMEILSKKFQIAS-SRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTT-----------------------QS 277 (304)
Q Consensus 222 ~~gKP~~~~~~~al~~lg~~~-~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~-----------------------~~ 277 (304)
..+||+|++|..+++++|+.+ ++|+||||+ .+||++|+++||++|+|.+|... .+
T Consensus 84 ~~~KP~p~~~~~a~~~l~~~~~~~~v~VGDs-~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 162 (196)
T 2oda_A 84 TAGWPQPDACWMALMALNVSQLEGCVLISGD-PRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATL 162 (196)
T ss_dssp SSCTTSTHHHHHHHHHTTCSCSTTCEEEESC-HHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHH
T ss_pred CCCCCChHHHHHHHHHcCCCCCccEEEEeCC-HHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHH
Confidence 458999999999999999975 899999999 79999999999999999999752 01
Q ss_pred ccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 278 TLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 278 ~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
++.. ..|+++++++.||.++|.
T Consensus 163 ~l~~----~~~d~vi~~~~eL~~~l~ 184 (196)
T 2oda_A 163 KLYS----LGVHSVIDHLGELESCLA 184 (196)
T ss_dssp HHHH----TTCSEEESSGGGHHHHHH
T ss_pred HHHH----cCCCEEeCCHHHHHHHHH
Confidence 1111 379999999999988764
No 17
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=99.81 E-value=1.1e-20 Score=159.61 Aligned_cols=123 Identities=19% Similarity=0.147 Sum_probs=99.2
Q ss_pred CHHHHHHHHHHHHcCCCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcE
Q 022007 166 NYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRM 245 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~ 245 (304)
.++++.+.++.|+++ ...+++||.+... ...++..+|+.+++.+....+||+|.+|+.+++++|++|+++
T Consensus 106 ~~~~~~~~l~~l~~~-~~~~i~t~~~~~l---------~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 175 (230)
T 3vay_A 106 IFPEVQPTLEILAKT-FTLGVITNGNADV---------RRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAA 175 (230)
T ss_dssp BCTTHHHHHHHHHTT-SEEEEEESSCCCG---------GGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred cCcCHHHHHHHHHhC-CeEEEEECCchhh---------hhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchhe
Confidence 366778888888875 5567889977621 111234556666666777889999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhhC
Q 022007 246 CMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLGQ 304 (304)
Q Consensus 246 ~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~~ 304 (304)
+||||++.+|+.||+++|+.+++|.+|....+. . ..|+++++++.|+.++|.+
T Consensus 176 ~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~-----~~~~~~~~~l~el~~~l~~ 228 (230)
T 3vay_A 176 VHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-D-----RLPDAEIHNLSQLPEVLAR 228 (230)
T ss_dssp EEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-S-----SCCSEEESSGGGHHHHHHT
T ss_pred EEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-c-----CCCCeeECCHHHHHHHHHh
Confidence 999999339999999999999999998876544 2 4799999999999998864
No 18
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=99.80 E-value=1.7e-20 Score=158.42 Aligned_cols=78 Identities=24% Similarity=0.341 Sum_probs=68.4
Q ss_pred CcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeE-EEEccCCCCccccCCCCCCCCCcEEECCHHHH
Q 022007 220 PIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKT-LLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDI 298 (304)
Q Consensus 220 ~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~t-i~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el 298 (304)
....+||+|.+|+.+++++|++|++++||||+ .+|+.+|+++|+++ ++|.+|....+... ..|+++++++.|+
T Consensus 132 ~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~-~~Di~~a~~aG~~~~i~v~~g~~~~~~~~-----~~~~~~i~~l~el 205 (218)
T 2o2x_A 132 DHPMRKPNPGMLVEAGKRLALDLQRSLIVGDK-LADMQAGKRAGLAQGWLVDGEAAVQPGFA-----IRPLRDSSELGDL 205 (218)
T ss_dssp SCTTSTTSCHHHHHHHHHHTCCGGGCEEEESS-HHHHHHHHHTTCSEEEEETCCCEEETTEE-----EEEESSHHHHHHH
T ss_pred CCccCCCCHHHHHHHHHHcCCCHHHEEEEeCC-HHHHHHHHHCCCCEeEEEecCCCCccccc-----CCCCEecccHHHH
Confidence 35679999999999999999999999999999 69999999999999 99999986544322 3699999999999
Q ss_pred HHhhh
Q 022007 299 LELLG 303 (304)
Q Consensus 299 ~~~l~ 303 (304)
.++|.
T Consensus 206 ~~~l~ 210 (218)
T 2o2x_A 206 LAAIE 210 (218)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 19
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=99.79 E-value=1.7e-20 Score=160.21 Aligned_cols=126 Identities=14% Similarity=0.094 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHH--HHhhCCCCcccCCCcHHHHHHHHHHcCCCCC
Q 022007 167 YYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAM--CASTEKEPIVVGKPSTFMMEILSKKFQIASS 243 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~--~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~ 243 (304)
++++.+.++.|+++ |.+ +++||.+..... ..... ++..+| +.+++.+....+||+|++|+.+++++|++|+
T Consensus 111 ~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~----~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~ 184 (243)
T 3qxg_A 111 MPGAWELLQKVKSE-GLTPMVVTGSGQLSLL----ERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKAD 184 (243)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEECCCCCHHHH----TTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGG
T ss_pred CCCHHHHHHHHHHc-CCcEEEEeCCcHHHHH----HHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHH
Confidence 56777888888887 664 678887652211 11222 455667 7778888889999999999999999999999
Q ss_pred cEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 244 RMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 244 ~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
+|++|||+ .+|+.||+++|+.+++|.+|....+++.. ..||++++++.||.++|.
T Consensus 185 ~~i~vGD~-~~Di~~a~~aG~~~i~v~~~~~~~~~l~~----~~ad~v~~s~~el~~~l~ 239 (243)
T 3qxg_A 185 EAVVIENA-PLGVEAGHKAGIFTIAVNTGPLDGQVLLD----AGADLLFPSMQTLCDSWD 239 (243)
T ss_dssp GEEEEECS-HHHHHHHHHTTCEEEEECCSSSCHHHHHH----TTCSEEESCHHHHHHHHH
T ss_pred HeEEEeCC-HHHHHHHHHCCCEEEEEeCCCCCHHHHHh----cCCCEEECCHHHHHHHHH
Confidence 99999999 79999999999999999999876655432 369999999999998875
No 20
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=99.79 E-value=2.1e-20 Score=159.44 Aligned_cols=127 Identities=13% Similarity=0.060 Sum_probs=100.3
Q ss_pred CHHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHH--HHhhCCCCcccCCCcHHHHHHHHHHcCCCC
Q 022007 166 NYYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAM--CASTEKEPIVVGKPSTFMMEILSKKFQIAS 242 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~--~~~~~~~~~~~gKP~~~~~~~al~~lg~~~ 242 (304)
.++++.+.++.++++ |.+ +++||.+.... ...... ++..+| +.+++.+....+||+|.+|+.+++++|++|
T Consensus 109 ~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~----~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~ 182 (247)
T 3dv9_A 109 RMPGALEVLTKIKSE-GLTPMVVTGSGQTSL----LDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKP 182 (247)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEECSCC---C----HHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCG
T ss_pred CCCCHHHHHHHHHHc-CCcEEEEcCCchHHH----HHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCCh
Confidence 356777888888887 664 67888765221 111222 344566 667777888899999999999999999999
Q ss_pred CcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 243 SRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 243 ~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
++|++|||+ .+|+.||+++|+.+++|.+|....+++.. ..|+++++++.|+.++|.
T Consensus 183 ~~~i~vGD~-~~Di~~a~~aG~~~i~v~~~~~~~~~l~~----~~ad~v~~~~~el~~~l~ 238 (247)
T 3dv9_A 183 NEALVIENA-PLGVQAGVAAGIFTIAVNTGPLHDNVLLN----EGANLLFHSMPDFNKNWE 238 (247)
T ss_dssp GGEEEEECS-HHHHHHHHHTTSEEEEECCSSSCHHHHHT----TTCSEEESSHHHHHHHHH
T ss_pred hheEEEeCC-HHHHHHHHHCCCeEEEEcCCCCCHHHHHh----cCCCEEECCHHHHHHHHH
Confidence 999999999 79999999999999999999877665543 379999999999988774
No 21
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=99.77 E-value=3.4e-20 Score=159.05 Aligned_cols=124 Identities=10% Similarity=0.003 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcE
Q 022007 167 YYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRM 245 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~ 245 (304)
++++.+.++.|+++ +.+ .++||... . ...+...++..+|+.+++.+.+..+||+|++|..+++++|++|++|
T Consensus 97 ~pg~~~ll~~L~~~-g~~i~i~t~~~~-~-----~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~ 169 (243)
T 4g9b_A 97 LPGIRSLLADLRAQ-QISVGLASVSLN-A-----PTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQAC 169 (243)
T ss_dssp CTTHHHHHHHHHHT-TCEEEECCCCTT-H-----HHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGE
T ss_pred cccHHHHHHhhhcc-cccceecccccc-h-----hhhhhhhhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHE
Confidence 56788888888887 665 55676543 1 1122223345667778888889999999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhh
Q 022007 246 CMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELL 302 (304)
Q Consensus 246 ~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l 302 (304)
+||||+ .+||++|+++||++|+|.+|....+.+.. ..++.+.+++.++.+.+
T Consensus 170 l~VgDs-~~di~aA~~aG~~~I~V~~g~~~ad~~~~----~~~~l~~~~l~~~~~~l 221 (243)
T 4g9b_A 170 IGIEDA-QAGIDAINASGMRSVGIGAGLTGAQLLLP----STESLTWPRLSAFWQNV 221 (243)
T ss_dssp EEEESS-HHHHHHHHHHTCEEEEESTTCCSCSEEES----SGGGCCHHHHHHHHHHH
T ss_pred EEEcCC-HHHHHHHHHcCCEEEEECCCCCcHHHhcC----ChhhcCHHHHHHHHHHH
Confidence 999999 89999999999999999999765444332 24566666677666544
No 22
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=99.77 E-value=5e-18 Score=143.44 Aligned_cols=79 Identities=13% Similarity=0.197 Sum_probs=70.6
Q ss_pred CcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHH
Q 022007 220 PIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDIL 299 (304)
Q Consensus 220 ~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~ 299 (304)
....+||+|.+|+.+++++|++|++++||||+ .+|+.||+++|+.+++|.+|....+++. ..|+++++++.|+.
T Consensus 150 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~-~~Di~~a~~~G~~~~~v~~~~~~~~~~~-----~~~~~v~~~~~el~ 223 (233)
T 3umb_A 150 AVRLYKTAPAAYALAPRAFGVPAAQILFVSSN-GWDACGATWHGFTTFWINRLGHPPEALD-----VAPAAAGHDMRDLL 223 (233)
T ss_dssp GTTCCTTSHHHHTHHHHHHTSCGGGEEEEESC-HHHHHHHHHHTCEEEEECTTCCCCCSSS-----CCCSEEESSHHHHH
T ss_pred ccCCCCcCHHHHHHHHHHhCCCcccEEEEeCC-HHHHHHHHHcCCEEEEEcCCCCCchhcc-----CCCCEEECCHHHHH
Confidence 34568999999999999999999999999999 9999999999999999999876655554 37999999999999
Q ss_pred HhhhC
Q 022007 300 ELLGQ 304 (304)
Q Consensus 300 ~~l~~ 304 (304)
++|.+
T Consensus 224 ~~l~~ 228 (233)
T 3umb_A 224 QFVQA 228 (233)
T ss_dssp HHHHC
T ss_pred HHHHH
Confidence 98863
No 23
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=99.76 E-value=7.4e-20 Score=156.88 Aligned_cols=127 Identities=14% Similarity=0.148 Sum_probs=101.2
Q ss_pred CHHHHHHHHHHHHcCCCc-eEEEecCCCccCCCCCccccChHHHHHHHHHhhCCC--CcccCCCcHHHHHHHHHHcCCCC
Q 022007 166 NYYKLQYGTLCIRENPGC-LFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKE--PIVVGKPSTFMMEILSKKFQIAS 242 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~--~~~~gKP~~~~~~~al~~lg~~~ 242 (304)
.++++.+.++.|+++ |. .+++||....... ..+....++..+|+.+++.+ ....+||+|++|+.+++++|++|
T Consensus 113 ~~~~~~~~l~~l~~~-g~~~~i~sn~~~~~~~---~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~ 188 (250)
T 3l5k_A 113 LMPGAEKLIIHLRKH-GIPFALATSSRSASFD---MKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPP 188 (250)
T ss_dssp BCTTHHHHHHHHHHT-TCCEEEECSCCHHHHH---HHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCC
T ss_pred CCCCHHHHHHHHHhC-CCcEEEEeCCCHHHHH---HHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCC
Confidence 356778888888887 55 4778887642211 11222334667777788888 88999999999999999999998
Q ss_pred --CcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 243 --SRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 243 --~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
++|++|||+ .+|++||+++|+.+++|.+|+...+ .. ..||++++++.|+.+.|.
T Consensus 189 ~~~~~i~iGD~-~~Di~~a~~aG~~~i~v~~~~~~~~-~~-----~~ad~v~~sl~el~~~l~ 244 (250)
T 3l5k_A 189 AMEKCLVFEDA-PNGVEAALAAGMQVVMVPDGNLSRD-LT-----TKATLVLNSLQDFQPELF 244 (250)
T ss_dssp CGGGEEEEESS-HHHHHHHHHTTCEEEECCCTTSCGG-GS-----TTSSEECSCGGGCCGGGG
T ss_pred CcceEEEEeCC-HHHHHHHHHcCCEEEEEcCCCCchh-hc-----ccccEeecCHHHhhHHHh
Confidence 999999999 7999999999999999999987654 33 379999999999977653
No 24
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=99.76 E-value=8e-21 Score=159.99 Aligned_cols=129 Identities=15% Similarity=0.126 Sum_probs=99.3
Q ss_pred CHHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCc
Q 022007 166 NYYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSR 244 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~ 244 (304)
.++++.+.++.++++ |.+ +++||....... ......++..+|+.+++.+....+||+|.+|+.+++++|++|++
T Consensus 87 ~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~----~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 161 (226)
T 3mc1_A 87 VYDGIEALLSSLKDY-GFHLVVATSKPTVFSK----QILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDD 161 (226)
T ss_dssp BCTTHHHHHHHHHHH-TCEEEEEEEEEHHHHH----HHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGG
T ss_pred cCcCHHHHHHHHHHC-CCeEEEEeCCCHHHHH----HHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCccc
Confidence 356777888888876 554 677886441110 11111112334556667788889999999999999999999999
Q ss_pred EEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhhC
Q 022007 245 MCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLGQ 304 (304)
Q Consensus 245 ~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~~ 304 (304)
+++|||+ .+|+.||+++|+.+++|.+|+...+++.. ..||++++++.||.++|.+
T Consensus 162 ~i~iGD~-~~Di~~a~~aG~~~i~v~~g~~~~~~~~~----~~ad~v~~s~~el~~~~~~ 216 (226)
T 3mc1_A 162 AIMIGDR-EYDVIGALKNNLPSIGVTYGFGSYEELKN----AGANYIVNSVDELHKKILE 216 (226)
T ss_dssp EEEEESS-HHHHHHHHTTTCCEEEESSSSSCHHHHHH----HTCSEEESSHHHHHHHHHT
T ss_pred EEEECCC-HHHHHHHHHCCCCEEEEccCCCCHHHHHH----cCCCEEECCHHHHHHHHHH
Confidence 9999999 79999999999999999999987666522 2799999999999998763
No 25
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=99.76 E-value=9.6e-18 Score=141.26 Aligned_cols=78 Identities=14% Similarity=0.148 Sum_probs=69.2
Q ss_pred cccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHH
Q 022007 221 IVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILE 300 (304)
Q Consensus 221 ~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~ 300 (304)
...+||+|.+|+.+++++|++|+++++|||+ .+|+.||+++|+.+++|.+|....+.+. ..|+++++++.|+.+
T Consensus 148 ~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~-~~Di~~a~~aG~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~el~~ 221 (230)
T 3um9_A 148 VRLFKPHQKVYELAMDTLHLGESEILFVSCN-SWDATGAKYFGYPVCWINRSNGVFDQLG-----VVPDIVVSDVGVLAS 221 (230)
T ss_dssp TTCCTTCHHHHHHHHHHHTCCGGGEEEEESC-HHHHHHHHHHTCCEEEECTTSCCCCCSS-----CCCSEEESSHHHHHH
T ss_pred cccCCCChHHHHHHHHHhCCCcccEEEEeCC-HHHHHHHHHCCCEEEEEeCCCCcccccc-----CCCcEEeCCHHHHHH
Confidence 4568999999999999999999999999999 7999999999999999999865544444 379999999999999
Q ss_pred hhhC
Q 022007 301 LLGQ 304 (304)
Q Consensus 301 ~l~~ 304 (304)
+|.+
T Consensus 222 ~l~~ 225 (230)
T 3um9_A 222 RFSP 225 (230)
T ss_dssp TCCC
T ss_pred HHHH
Confidence 8753
No 26
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=99.75 E-value=3.7e-20 Score=155.27 Aligned_cols=126 Identities=12% Similarity=0.146 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcE
Q 022007 167 YYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRM 245 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~ 245 (304)
++++.+.++.|+++ |.+ .++||....... ......++..+|+.+++.+.+..+||+|++|+.+++++|++|++|
T Consensus 86 ~pg~~~~l~~L~~~-g~~~~i~tn~~~~~~~----~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~ 160 (216)
T 3kbb_A 86 NPGVREALEFVKSK-RIKLALATSTPQREAL----ERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKV 160 (216)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEECSSCHHHHH----HHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGE
T ss_pred CccHHHHHHHHHHc-CCCcccccCCcHHHHH----HHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccce
Confidence 56778888899887 654 778997652211 111122244567777888889999999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCeEEE-EccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 246 CMVGDRLDTDILFGQNAGCKTLL-VLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 246 ~~IGD~~~~Di~~a~~aG~~ti~-V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
+||||+ .+||++|+++||++|+ |.+|....+.+.. ..++.+. ++.|+.+.|.
T Consensus 161 l~VgDs-~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~----~~~~~i~-~~~eli~~l~ 213 (216)
T 3kbb_A 161 VVFEDS-KSGVEAAKSAGIERIYGVVHSLNDGKALLE----AGAVALV-KPEEILNVLK 213 (216)
T ss_dssp EEEECS-HHHHHHHHHTTCCCEEEECCSSSCCHHHHH----TTCSEEE-CGGGHHHHHH
T ss_pred EEEecC-HHHHHHHHHcCCcEEEEecCCCCCHHHHHh----CCCcEEC-CHHHHHHHHH
Confidence 999999 7999999999999995 8899877666654 2455544 6777777664
No 27
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=99.75 E-value=2.5e-20 Score=158.22 Aligned_cols=127 Identities=17% Similarity=0.200 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcE
Q 022007 167 YYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRM 245 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~ 245 (304)
++++.+.++.|+++ |.+ +++||...... .......++..+|+.+++.+....+||+|++|+.+++++|++|+++
T Consensus 106 ~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~----~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~ 180 (237)
T 4ex6_A 106 YPGVLEGLDRLSAA-GFRLAMATSKVEKAA----RAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERC 180 (237)
T ss_dssp CTTHHHHHHHHHHT-TEEEEEECSSCHHHH----HHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred CCCHHHHHHHHHhC-CCcEEEEcCCChHHH----HHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 56777888888877 665 67788655211 1111111233456667788888999999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 246 CMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 246 ~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
++|||+ .+|+.||+++|+.+++|.+|+...+++.. ..|+++++++.||.++|.
T Consensus 181 i~vGD~-~~Di~~a~~aG~~~i~v~~g~~~~~~~~~----~~ad~v~~~~~el~~~l~ 233 (237)
T 4ex6_A 181 VVIGDG-VPDAEMGRAAGMTVIGVSYGVSGPDELMR----AGADTVVDSFPAAVTAVL 233 (237)
T ss_dssp EEEESS-HHHHHHHHHTTCEEEEESSSSSCHHHHHH----TTCSEEESSHHHHHHHHH
T ss_pred EEEcCC-HHHHHHHHHCCCeEEEEecCCCCHHHHHh----cCCCEEECCHHHHHHHHH
Confidence 999999 79999999999999999999876555543 379999999999999875
No 28
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=99.75 E-value=3.6e-20 Score=160.61 Aligned_cols=127 Identities=15% Similarity=0.006 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHH-HHHhhCCCCcccCCCcHHHHHHHHHHcCCCC-C
Q 022007 167 YYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAA-MCASTEKEPIVVGKPSTFMMEILSKKFQIAS-S 243 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~-~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~-~ 243 (304)
++++.+.++.|+++ |.+ +++||.+..... ......++..+ |+.+++.+....+||+|.+|+.+++++|++| +
T Consensus 113 ~~~~~~~l~~l~~~-g~~~~i~tn~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 187 (277)
T 3iru_A 113 IPGWKEVFDKLIAQ-GIKVGGNTGYGPGMMA----PALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVN 187 (277)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEECSSCHHHHH----HHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGG
T ss_pred CcCHHHHHHHHHHc-CCeEEEEeCCchHHHH----HHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCc
Confidence 56777888888876 554 677886552110 11111122233 4556677778889999999999999999999 9
Q ss_pred cEEEEcCCchhhHHHHHHcCCeEEEEccCCCC-----------------------ccccCCCCCCCCCcEEECCHHHHHH
Q 022007 244 RMCMVGDRLDTDILFGQNAGCKTLLVLSGVTT-----------------------QSTLQDPSNNIQPDYYTNQVSDILE 300 (304)
Q Consensus 244 ~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~-----------------------~~~~~~~~~~~~pd~v~~~l~el~~ 300 (304)
+|+||||+ .+|+.||+++|+.+++|.+|.+. .+++.. ..||++++++.||.+
T Consensus 188 ~~i~vGD~-~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~ad~v~~~~~el~~ 262 (277)
T 3iru_A 188 GCIKVDDT-LPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFN----AGAHYVIDSVADLET 262 (277)
T ss_dssp GEEEEESS-HHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHH----HTCSEEESSGGGTHH
T ss_pred cEEEEcCC-HHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhh----CCCCEEecCHHHHHH
Confidence 99999999 79999999999999999999752 222322 369999999999998
Q ss_pred hhh
Q 022007 301 LLG 303 (304)
Q Consensus 301 ~l~ 303 (304)
+|.
T Consensus 263 ~l~ 265 (277)
T 3iru_A 263 VIT 265 (277)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 29
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=99.75 E-value=1e-19 Score=153.58 Aligned_cols=127 Identities=16% Similarity=0.047 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcE
Q 022007 167 YYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRM 245 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~ 245 (304)
++++.+.++.+++. |.+ +++||.+..... ......++..+|+.+++.+....+||+|.+|+.+++++|++|+++
T Consensus 93 ~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~----~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~ 167 (233)
T 3s6j_A 93 LPGAVELLETLDKE-NLKWCIATSGGIDTAT----INLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDEC 167 (233)
T ss_dssp CTTHHHHHHHHHHT-TCCEEEECSSCHHHHH----HHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGE
T ss_pred CCCHHHHHHHHHHC-CCeEEEEeCCchhhHH----HHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHE
Confidence 56677788888876 554 677886542110 000001122345556677778889999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 246 CMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 246 ~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
++|||+ .+|+.||+++|+++++|.+|....+++.. ..||++++++.|+.++|+
T Consensus 168 i~iGD~-~~Di~~a~~aG~~~i~v~~g~~~~~~l~~----~~ad~v~~~~~el~~~l~ 220 (233)
T 3s6j_A 168 LVIGDA-IWDMLAARRCKATGVGLLSGGYDIGELER----AGALRVYEDPLDLLNHLD 220 (233)
T ss_dssp EEEESS-HHHHHHHHHTTCEEEEEGGGSCCHHHHHH----TTCSEEESSHHHHHHTGG
T ss_pred EEEeCC-HHhHHHHHHCCCEEEEEeCCCCchHhHHh----cCCCEEECCHHHHHHHHH
Confidence 999999 79999999999999999999766666554 369999999999999886
No 30
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=99.74 E-value=3.5e-17 Score=139.24 Aligned_cols=76 Identities=16% Similarity=0.286 Sum_probs=67.1
Q ss_pred cccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCC-cEEECCHHHHH
Q 022007 221 IVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQP-DYYTNQVSDIL 299 (304)
Q Consensus 221 ~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~p-d~v~~~l~el~ 299 (304)
...+||+|.+|+.+++++|++|+++++|||+ .+|+.+|+++|+.+++|.+|+. .+.+. ..| +++++++.|+.
T Consensus 157 ~~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~-~~Di~~a~~aG~~~~~v~~~~~-~~~~~-----~~~~~~~~~~~~el~ 229 (240)
T 2no4_A 157 LKIYKPDPRIYQFACDRLGVNPNEVCFVSSN-AWDLGGAGKFGFNTVRINRQGN-PPEYE-----FAPLKHQVNSLSELW 229 (240)
T ss_dssp TTCCTTSHHHHHHHHHHHTCCGGGEEEEESC-HHHHHHHHHHTCEEEEECTTCC-CCCCT-----TSCCSEEESSGGGHH
T ss_pred cCCCCCCHHHHHHHHHHcCCCcccEEEEeCC-HHHHHHHHHCCCEEEEECCCCC-CCccc-----CCCCceeeCCHHHHH
Confidence 3468999999999999999999999999999 8999999999999999999876 33332 368 99999999999
Q ss_pred Hhhh
Q 022007 300 ELLG 303 (304)
Q Consensus 300 ~~l~ 303 (304)
++|.
T Consensus 230 ~~l~ 233 (240)
T 2no4_A 230 PLLA 233 (240)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 8875
No 31
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=99.74 E-value=1.1e-19 Score=153.98 Aligned_cols=128 Identities=16% Similarity=0.146 Sum_probs=97.4
Q ss_pred CHHHHHHHHHHHHcCCCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcC-CCCCc
Q 022007 166 NYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQ-IASSR 244 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg-~~~~~ 244 (304)
.++++.+.++.++++ ...+++||.+..... ......++..+|+.+++.+....+||+|.+|+.+++++| ++|++
T Consensus 104 ~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~----~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~ 178 (238)
T 3ed5_A 104 LIDGAFDLISNLQQQ-FDLYIVTNGVSHTQY----KRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEH 178 (238)
T ss_dssp BCTTHHHHHHHHHTT-SEEEEEECSCHHHHH----HHHHHTTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGG
T ss_pred CCccHHHHHHHHHhc-CeEEEEeCCCHHHHH----HHHHHcChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCChhH
Confidence 467788888888876 556788987652210 011111123445556667778889999999999999999 99999
Q ss_pred EEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhhC
Q 022007 245 MCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLGQ 304 (304)
Q Consensus 245 ~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~~ 304 (304)
+++|||++.+|+.||+++|+.+++|.+|+.... .. ..|+++++++.|+.++|.+
T Consensus 179 ~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~-~~-----~~ad~v~~~~~el~~~l~~ 232 (238)
T 3ed5_A 179 TLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNV-PE-----IIPTYEIRKLEELYHILNI 232 (238)
T ss_dssp EEEEESCTTTTHHHHHHTTCEEEEECTTCCCCT-TC-----CCCSEEESSGGGHHHHHTC
T ss_pred eEEECCCcHHHHHHHHHCCCEEEEECCCCCCCc-cc-----CCCCeEECCHHHHHHHHHh
Confidence 999999933999999999999999999865432 22 3799999999999998863
No 32
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=99.74 E-value=2e-19 Score=156.11 Aligned_cols=125 Identities=10% Similarity=0.035 Sum_probs=93.6
Q ss_pred CCHHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCC
Q 022007 165 INYYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASS 243 (304)
Q Consensus 165 ~~~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~ 243 (304)
..|+++.++++.|+++ |.+ +|+||.+....... ....+.+++..+|+.+++. .+. +||+|++|+.+++++|++|+
T Consensus 130 ~~~~g~~~~L~~L~~~-g~~~~i~Tn~~~~~~~~~-l~~~~~~~l~~~fd~i~~~-~~~-~KP~p~~~~~~~~~lg~~p~ 205 (261)
T 1yns_A 130 EFFADVVPAVRKWREA-GMKVYIYSSGSVEAQKLL-FGHSTEGDILELVDGHFDT-KIG-HKVESESYRKIADSIGCSTN 205 (261)
T ss_dssp CCCTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHH-HHTBTTBCCGGGCSEEECG-GGC-CTTCHHHHHHHHHHHTSCGG
T ss_pred ccCcCHHHHHHHHHhC-CCeEEEEeCCCHHHHHHH-HHhhcccChHhhccEEEec-CCC-CCCCHHHHHHHHHHhCcCcc
Confidence 3578899999999877 665 67899876321100 0011122355667777777 666 99999999999999999999
Q ss_pred cEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHH
Q 022007 244 RMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDI 298 (304)
Q Consensus 244 ~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el 298 (304)
+|+||||+ .+|+.+|+++||++++|.++.....+... ..|+++++++.|+
T Consensus 206 ~~l~VgDs-~~di~aA~~aG~~~i~v~~~~~~~~~~~~----~~~~~~i~~l~el 255 (261)
T 1yns_A 206 NILFLTDV-TREASAAEEADVHVAVVVRPGNAGLTDDE----KTYYSLITSFSEL 255 (261)
T ss_dssp GEEEEESC-HHHHHHHHHTTCEEEEECCTTCCCCCHHH----HHHSCEESSGGGC
T ss_pred cEEEEcCC-HHHHHHHHHCCCEEEEEeCCCCCcccccc----cCCCEEECCHHHh
Confidence 99999999 99999999999999999875433221111 2589999999886
No 33
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=99.73 E-value=8e-19 Score=151.20 Aligned_cols=127 Identities=13% Similarity=0.084 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHcCCCc-eEEEecCCCccCCCCCccccChHHHHHHHHH-hhCCCCcc-cCCCcHHHHHHHHHHcCCCCC
Q 022007 167 YYKLQYGTLCIRENPGC-LFIATNRDAVGHLTDLQEWPGAGCMVAAMCA-STEKEPIV-VGKPSTFMMEILSKKFQIASS 243 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~-~~~~~~~~-~gKP~~~~~~~al~~lg~~~~ 243 (304)
++++.+.++.|+++ +. .+++||.+.... .......++..+|+. +++.+... .+||+|++|+.+++++|++|+
T Consensus 112 ~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~----~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~ 186 (259)
T 4eek_A 112 IEGAAETLRALRAA-GVPFAIGSNSERGRL----HLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPE 186 (259)
T ss_dssp CTTHHHHHHHHHHH-TCCEEEECSSCHHHH----HHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGG
T ss_pred CccHHHHHHHHHHC-CCeEEEEeCCCHHHH----HHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHH
Confidence 55677777788766 54 467788655221 111112234567777 77778888 999999999999999999999
Q ss_pred cEEEEcCCchhhHHHHHHcCCeEEEEccCCCC----ccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 244 RMCMVGDRLDTDILFGQNAGCKTLLVLSGVTT----QSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 244 ~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~----~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
++++|||+ .+|+.||+++|+.+++|.+|... .+++.. ..||++++++.||.++|.
T Consensus 187 ~~i~iGD~-~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~----~~ad~vi~~l~el~~~l~ 245 (259)
T 4eek_A 187 RCVVIEDS-VTGGAAGLAAGATLWGLLVPGHPHPDGAAALSR----LGAARVLTSHAELRAALA 245 (259)
T ss_dssp GEEEEESS-HHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHH----HTCSEEECSHHHHHHHHH
T ss_pred HEEEEcCC-HHHHHHHHHCCCEEEEEccCCCcccccHHHHHh----cCcchhhCCHHHHHHHHH
Confidence 99999999 79999999999999999998654 223322 369999999999999875
No 34
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=99.73 E-value=4e-17 Score=137.95 Aligned_cols=77 Identities=17% Similarity=0.218 Sum_probs=66.9
Q ss_pred cccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHH
Q 022007 221 IVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILE 300 (304)
Q Consensus 221 ~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~ 300 (304)
...+||+|.+|+.+++++|++|+++++|||+ .+|+.+|+++|+.+++|.+|....+.+. ..|+++++++.|+.+
T Consensus 147 ~~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~-~~Di~~a~~aG~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~el~~ 220 (232)
T 1zrn_A 147 VQVYKPDNRVYELAEQALGLDRSAILFVASN-AWDATGARYFGFPTCWINRTGNVFEEMG-----QTPDWEVTSLRAVVE 220 (232)
T ss_dssp GTCCTTSHHHHHHHHHHHTSCGGGEEEEESC-HHHHHHHHHHTCCEEEECTTCCCCCSSS-----CCCSEEESSHHHHHT
T ss_pred cCCCCCCHHHHHHHHHHcCCCcccEEEEeCC-HHHHHHHHHcCCEEEEEcCCCCCccccC-----CCCCEEECCHHHHHH
Confidence 4568999999999999999999999999999 7999999999999999998865443333 379999999999988
Q ss_pred hhh
Q 022007 301 LLG 303 (304)
Q Consensus 301 ~l~ 303 (304)
+|.
T Consensus 221 ~l~ 223 (232)
T 1zrn_A 221 LFE 223 (232)
T ss_dssp TC-
T ss_pred HHH
Confidence 764
No 35
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=99.72 E-value=5.7e-20 Score=157.50 Aligned_cols=127 Identities=12% Similarity=0.095 Sum_probs=94.4
Q ss_pred CHHHHHHHHHHHHcCCCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcE
Q 022007 166 NYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRM 245 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~ 245 (304)
.++++.+.++.+++. ...+++||.+..... ......++ .|+.+++.+....+||+|.+|+.+++++|++|+++
T Consensus 121 ~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~----~~l~~~g~--~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 193 (254)
T 3umc_A 121 PWPDTLAGMHALKAD-YWLAALSNGNTALML----DVARHAGL--PWDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEV 193 (254)
T ss_dssp ECTTHHHHHHHHTTT-SEEEECCSSCHHHHH----HHHHHHTC--CCSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred CCccHHHHHHHHHhc-CeEEEEeCCCHHHHH----HHHHHcCC--CcceEEeecccccCCCCHHHHHHHHHHcCCChHHE
Confidence 356777888888764 445777886542110 00000001 03444555667889999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCeEEEEc----cCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 246 CMVGDRLDTDILFGQNAGCKTLLVL----SGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 246 ~~IGD~~~~Di~~a~~aG~~ti~V~----~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
++|||+ .+|++||+++|+.+++|. +|....+++. ....||++++++.||.++|.
T Consensus 194 ~~iGD~-~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~---~~~~ad~v~~~l~el~~~l~ 251 (254)
T 3umc_A 194 MLCAAH-NYDLKAARALGLKTAFIARPLEYGPGQSQDLA---AEQDWDLIASDLLDLHRQLA 251 (254)
T ss_dssp EEEESC-HHHHHHHHHTTCEEEEECCTTTTCTTCCSSSS---CSSCCSEEESSHHHHHHHHH
T ss_pred EEEcCc-hHhHHHHHHCCCeEEEEecCCccCCCCCcccc---cCCCCcEEECCHHHHHHHhc
Confidence 999999 999999999999999998 7776655551 11489999999999999875
No 36
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=99.72 E-value=2.9e-17 Score=136.50 Aligned_cols=73 Identities=27% Similarity=0.386 Sum_probs=65.5
Q ss_pred ccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHh
Q 022007 222 VVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILEL 301 (304)
Q Consensus 222 ~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~ 301 (304)
..+||+|.+|+.+++++|++|+++++|||+ .+|++||+++|+++++|.+|... ... .||++++++.||.+.
T Consensus 124 ~~~kp~~~~~~~~~~~~g~~~~~~i~iGD~-~~Di~~a~~aG~~~i~v~~~~~~---~~~-----~ad~v~~~~~el~~~ 194 (205)
T 3m9l_A 124 APPKPHPGGLLKLAEAWDVSPSRMVMVGDY-RFDLDCGRAAGTRTVLVNLPDNP---WPE-----LTDWHARDCAQLRDL 194 (205)
T ss_dssp SCCTTSSHHHHHHHHHTTCCGGGEEEEESS-HHHHHHHHHHTCEEEECSSSSCS---CGG-----GCSEECSSHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHEEEECCC-HHHHHHHHHcCCEEEEEeCCCCc---ccc-----cCCEEeCCHHHHHHH
Confidence 569999999999999999999999999999 79999999999999999887642 222 599999999999998
Q ss_pred hh
Q 022007 302 LG 303 (304)
Q Consensus 302 l~ 303 (304)
++
T Consensus 195 ~~ 196 (205)
T 3m9l_A 195 LS 196 (205)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 37
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=99.72 E-value=1.9e-19 Score=149.69 Aligned_cols=125 Identities=13% Similarity=0.123 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcE
Q 022007 167 YYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRM 245 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~ 245 (304)
++++.+.++.++++ |.+ +++||....... ......++..+|+.+++.+....+||+|++|+.+++++|++|+++
T Consensus 86 ~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~----~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 160 (216)
T 2pib_A 86 NPGVREALEFVKSK-RIKLALATSTPQREAL----ERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKV 160 (216)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEECSSCHHHHH----HHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGE
T ss_pred CcCHHHHHHHHHHC-CCCEEEEeCCcHHhHH----HHHHhcChHHhcCEEeecccCCCCCcCcHHHHHHHHHcCCCCceE
Confidence 56677888888877 554 677886552110 111111123345556677778889999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCeEE--EEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 246 CMVGDRLDTDILFGQNAGCKTL--LVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 246 ~~IGD~~~~Di~~a~~aG~~ti--~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
++|||+ .+|+.||+++|++++ +|.+|+...+.+ . .|+++++++.|+.++|.
T Consensus 161 i~iGD~-~~Di~~a~~aG~~~i~~~v~~~~~~~~~~-~-----~a~~~~~~~~el~~~l~ 213 (216)
T 2pib_A 161 VVFEDS-KSGVEAAKSAGIERIYGVVHSLNDGKALL-E-----AGAVALVKPEEILNVLK 213 (216)
T ss_dssp EEEECS-HHHHHHHHHTTCCEEEEECCSSSCCHHHH-H-----TTCSEEECGGGHHHHHH
T ss_pred EEEeCc-HHHHHHHHHcCCcEEehccCCCCCchhhc-c-----hhheeeCCHHHHHHHHH
Confidence 999999 799999999999999 999998776655 3 69999999999998875
No 38
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=99.71 E-value=3.9e-19 Score=150.21 Aligned_cols=126 Identities=15% Similarity=0.151 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHcCCCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcEE
Q 022007 167 YYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMC 246 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~~ 246 (304)
++++.+.++.++++ ...+++||.+..... ......++..+|+.+++.+....+||+|.+|+.+++++|++|++++
T Consensus 102 ~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~----~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 176 (234)
T 3u26_A 102 YPEVVEVLKSLKGK-YHVGMITDSDTEQAM----AFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAV 176 (234)
T ss_dssp CTTHHHHHHHHTTT-SEEEEEESSCHHHHH----HHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred CcCHHHHHHHHHhC-CcEEEEECCCHHHHH----HHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhEE
Confidence 56777888888775 445778887652110 0111111223344445555667899999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 247 MVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 247 ~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
+|||++.+|+.||+++|+.+++|.+|+...+... .|+++++++.|+.++|.
T Consensus 177 ~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~------~a~~~~~~~~el~~~l~ 227 (234)
T 3u26_A 177 YVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWD------KCDFIVSDLREVIKIVD 227 (234)
T ss_dssp EEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGG------GCSEEESSTHHHHHHHH
T ss_pred EEcCCcHHHHHHHHHcCCEEEEECCCCCcccccc------CCCEeeCCHHHHHHHHH
Confidence 9999933999999999999999999976644332 69999999999998875
No 39
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=99.70 E-value=2.5e-18 Score=145.50 Aligned_cols=125 Identities=15% Similarity=0.086 Sum_probs=95.1
Q ss_pred CHHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCc
Q 022007 166 NYYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSR 244 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~ 244 (304)
.++++.+.+..++ + +.+ +++||.+..... ......++..+|+.+++.+....+||+|.+|+.+++++|++|++
T Consensus 108 ~~~~~~~~l~~l~-~-g~~~~i~sn~~~~~~~----~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 181 (240)
T 3qnm_A 108 LMPHAKEVLEYLA-P-QYNLYILSNGFRELQS----RKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRE 181 (240)
T ss_dssp BSTTHHHHHHHHT-T-TSEEEEEECSCHHHHH----HHHHHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGG
T ss_pred cCccHHHHHHHHH-c-CCeEEEEeCCchHHHH----HHHHHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCccc
Confidence 3667888888888 5 654 678886542110 11111123344555666777888999999999999999999999
Q ss_pred EEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 245 MCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 245 ~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
+++|||++.+|++||+++|+.++++.+|... ... ..||++++++.|+.++.+
T Consensus 182 ~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~--~~~-----~~~d~vi~sl~e~~~~~~ 233 (240)
T 3qnm_A 182 SLMIGDSWEADITGAHGVGMHQAFYNVTERT--VFP-----FQPTYHIHSLKELMNLLE 233 (240)
T ss_dssp EEEEESCTTTTHHHHHHTTCEEEEECCSCCC--CCS-----SCCSEEESSTHHHHHHTC
T ss_pred EEEECCCchHhHHHHHHcCCeEEEEcCCCCC--CcC-----CCCceEECCHHHHHHHHh
Confidence 9999999449999999999999999998751 222 379999999999998864
No 40
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=99.70 E-value=1.3e-17 Score=140.81 Aligned_cols=120 Identities=17% Similarity=0.051 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCC-c
Q 022007 167 YYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASS-R 244 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~-~ 244 (304)
++++.+.++.|+++ |.+ +++||.+..... ......++..+|+.+++.+....+||+|++|+.+++++|++|+ +
T Consensus 105 ~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~----~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 179 (231)
T 3kzx_A 105 NDGAIELLDTLKEN-NITMAIVSNKNGERLR----SEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKE 179 (231)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEEEEEEHHHHH----HHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTT
T ss_pred CcCHHHHHHHHHHC-CCeEEEEECCCHHHHH----HHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccC
Confidence 55677777788776 554 667776541110 0111111223455566677788899999999999999999999 9
Q ss_pred EEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 245 MCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 245 ~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
+++|||+ .+|++||+++|+.+++|..+.. ..|+++++++.|+.++|.
T Consensus 180 ~v~vGD~-~~Di~~a~~aG~~~v~~~~~~~-----------~~~~~~~~~~~el~~~l~ 226 (231)
T 3kzx_A 180 VFFIGDS-ISDIQSAIEAGCLPIKYGSTNI-----------IKDILSFKNFYDIRNFIC 226 (231)
T ss_dssp EEEEESS-HHHHHHHHHTTCEEEEECC----------------CCEEESSHHHHHHHHH
T ss_pred EEEEcCC-HHHHHHHHHCCCeEEEECCCCC-----------CCCceeeCCHHHHHHHHH
Confidence 9999999 7999999999999999854422 258999999999998875
No 41
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=99.70 E-value=1.9e-18 Score=146.00 Aligned_cols=128 Identities=12% Similarity=0.086 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHcCCCc-eEEEecCCCccCCCCCccccChHHHHHHHHHhhC-CCCcccCCCcHHHHHHHHHHcC--CCC
Q 022007 167 YYKLQYGTLCIRENPGC-LFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTE-KEPIVVGKPSTFMMEILSKKFQ--IAS 242 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~-~~~~~~gKP~~~~~~~al~~lg--~~~ 242 (304)
++++.+.++.+++++|. ..++||....... ......++..+|+.+.. .+....+||++.+|+.+++++| ++|
T Consensus 95 ~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~----~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~ 170 (234)
T 2hcf_A 95 LEGVRELLDALSSRSDVLLGLLTGNFEASGR----HKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSP 170 (234)
T ss_dssp CTTHHHHHHHHHTCTTEEEEEECSSCHHHHH----HHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCG
T ss_pred CCCHHHHHHHHHhCCCceEEEEcCCcHHHHH----HHHHHCCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCCCc
Confidence 45566666677654234 3566765441110 00000001122222222 2333457799999999999999 999
Q ss_pred CcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 243 SRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 243 ~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
++|++|||+ .+|++||+++|+.+++|.+|+...+.+.. ..|+++++++.|+.++|.
T Consensus 171 ~~~i~iGD~-~~Di~~a~~aG~~~i~v~~~~~~~~~~~~----~~a~~v~~~~~el~~~l~ 226 (234)
T 2hcf_A 171 SQIVIIGDT-EHDIRCARELDARSIAVATGNFTMEELAR----HKPGTLFKNFAETDEVLA 226 (234)
T ss_dssp GGEEEEESS-HHHHHHHHTTTCEEEEECCSSSCHHHHHT----TCCSEEESCSCCHHHHHH
T ss_pred ccEEEECCC-HHHHHHHHHCCCcEEEEcCCCCCHHHHHh----CCCCEEeCCHHhHHHHHH
Confidence 999999999 79999999999999999999876655533 359999999999988775
No 42
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=99.70 E-value=2.7e-19 Score=152.87 Aligned_cols=127 Identities=12% Similarity=0.080 Sum_probs=94.0
Q ss_pred CHHHHHHHHHHHHcCCCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcE
Q 022007 166 NYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRM 245 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~ 245 (304)
.++++.+.++.++++ ...+++||.+..... ......++ .|+.+++.+....+||+|.+|+.+++++|++|+++
T Consensus 117 ~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~----~~l~~~~~--~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 189 (254)
T 3umg_A 117 PWPDSVPGLTAIKAE-YIIGPLSNGNTSLLL----DMAKNAGI--PWDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEV 189 (254)
T ss_dssp BCTTHHHHHHHHHHH-SEEEECSSSCHHHHH----HHHHHHTC--CCSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGE
T ss_pred CCcCHHHHHHHHHhC-CeEEEEeCCCHHHHH----HHHHhCCC--CeeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHE
Confidence 467788888888874 445777886542110 00000000 03334455567789999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCeEEEEc----cCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 246 CMVGDRLDTDILFGQNAGCKTLLVL----SGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 246 ~~IGD~~~~Di~~a~~aG~~ti~V~----~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
++|||+ .+|+.||+++|+.+++|. +|....+++. ....||++++++.||.++|.
T Consensus 190 ~~iGD~-~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~---~~~~~d~~~~~~~el~~~l~ 247 (254)
T 3umg_A 190 MLAAAH-NGDLEAAHATGLATAFILRPVEHGPHQTDDLA---PTGSWDISATDITDLAAQLR 247 (254)
T ss_dssp EEEESC-HHHHHHHHHTTCEEEEECCTTTTCTTCCSCSS---CSSCCSEEESSHHHHHHHHH
T ss_pred EEEeCC-hHhHHHHHHCCCEEEEEecCCcCCCCcccccc---ccCCCceEECCHHHHHHHhc
Confidence 999999 899999999999999998 7776655541 12489999999999999875
No 43
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=99.69 E-value=3.1e-16 Score=129.80 Aligned_cols=76 Identities=18% Similarity=0.266 Sum_probs=65.7
Q ss_pred CcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHH
Q 022007 220 PIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDIL 299 (304)
Q Consensus 220 ~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~ 299 (304)
....+||+|++|+.+++++| |++++||||+ .+|+.+|+++|+.+++|.+|....+.+. ..|+++++++.|+.
T Consensus 123 ~~~~~Kp~~~~~~~~~~~~~--~~~~~~vGD~-~~Di~~a~~aG~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~el~ 194 (201)
T 2w43_A 123 SVKEYKPSPKVYKYFLDSIG--AKEAFLVSSN-AFDVIGAKNAGMRSIFVNRKNTIVDPIG-----GKPDVIVNDFKELY 194 (201)
T ss_dssp GGTCCTTCHHHHHHHHHHHT--CSCCEEEESC-HHHHHHHHHTTCEEEEECSSSCCCCTTS-----CCCSEEESSHHHHH
T ss_pred hcCCCCCCHHHHHHHHHhcC--CCcEEEEeCC-HHHhHHHHHCCCEEEEECCCCCCccccC-----CCCCEEECCHHHHH
Confidence 34568999999999999999 9999999999 8899999999999999999765433333 37999999999999
Q ss_pred Hhhh
Q 022007 300 ELLG 303 (304)
Q Consensus 300 ~~l~ 303 (304)
++|.
T Consensus 195 ~~l~ 198 (201)
T 2w43_A 195 EWIL 198 (201)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8875
No 44
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=99.69 E-value=7.3e-20 Score=154.89 Aligned_cols=127 Identities=12% Similarity=0.053 Sum_probs=91.1
Q ss_pred CHHHHHHHHHHHHcCCCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHH---HHHcCCCC
Q 022007 166 NYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEIL---SKKFQIAS 242 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~a---l~~lg~~~ 242 (304)
.++++.+.++.|++ +...+++||.+...... .+.. +..+|+.+++.+....+||+|.+|+.+ ++++|++|
T Consensus 100 ~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~---~l~~---l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~ 172 (240)
T 3smv_A 100 AFPDTVEALQYLKK-HYKLVILSNIDRNEFKL---SNAK---LGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEK 172 (240)
T ss_dssp BCTTHHHHHHHHHH-HSEEEEEESSCHHHHHH---HHTT---TCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCG
T ss_pred CCCcHHHHHHHHHh-CCeEEEEeCCChhHHHH---HHHh---cCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCc
Confidence 46778888888887 23457789976522110 0000 112344455556677899999999999 88999999
Q ss_pred CcEEEEcCCchhhHHHHHHcCCeEEEEccC-----CCCc-cccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 243 SRMCMVGDRLDTDILFGQNAGCKTLLVLSG-----VTTQ-STLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 243 ~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G-----~~~~-~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
++|++|||++.+|+.||+++|+.+++|.++ ++.. +... ...||++++++.|+.++|.
T Consensus 173 ~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~----~~~ad~v~~~~~el~~~l~ 235 (240)
T 3smv_A 173 KDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSR----MPNVDFRFNSMGEMAEAHK 235 (240)
T ss_dssp GGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSS----CCCCSEEESSHHHHHHHHH
T ss_pred hhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcC----CCCCCEEeCCHHHHHHHHH
Confidence 999999999449999999999999999854 2221 1222 1489999999999998875
No 45
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=99.69 E-value=1.5e-16 Score=135.71 Aligned_cols=77 Identities=18% Similarity=0.221 Sum_probs=68.1
Q ss_pred ccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHh
Q 022007 222 VVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILEL 301 (304)
Q Consensus 222 ~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~ 301 (304)
..+||+|++|+.+++++|++|++|+||||+ .+|+++|+++|+.+++|.+|+...+++.. ..|+++++++.|+.++
T Consensus 162 ~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs-~~Di~~a~~aG~~~v~v~~~~~~~~~~~~----~~a~~~~~~~~el~~~ 236 (240)
T 2hi0_A 162 IRRKPAPDMTSECVKVLGVPRDKCVYIGDS-EIDIQTARNSEMDEIAVNWGFRSVPFLQK----HGATVIVDTAEKLEEA 236 (240)
T ss_dssp SCCTTSSHHHHHHHHHHTCCGGGEEEEESS-HHHHHHHHHTTCEEEEESSSSSCHHHHHH----TTCCCEECSHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHeEEEcCC-HHHHHHHHHCCCeEEEECCCCCchhHHHh----cCCCEEECCHHHHHHH
Confidence 358999999999999999999999999999 89999999999999999999866444432 2699999999999987
Q ss_pred hh
Q 022007 302 LG 303 (304)
Q Consensus 302 l~ 303 (304)
|.
T Consensus 237 l~ 238 (240)
T 2hi0_A 237 IL 238 (240)
T ss_dssp HH
T ss_pred hc
Confidence 74
No 46
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=99.68 E-value=1.7e-15 Score=132.69 Aligned_cols=74 Identities=14% Similarity=0.264 Sum_probs=63.4
Q ss_pred CCcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHH-
Q 022007 219 EPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSD- 297 (304)
Q Consensus 219 ~~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~e- 297 (304)
+....+.+++.+++.+++++|++++++++|||+ .||++|++.+| +.|++|++.++ ++. .+++++.+..|
T Consensus 195 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~-~NDi~m~~~ag---~~vam~na~~~-~k~-----~Ad~v~~s~~ed 264 (290)
T 3dnp_A 195 NIVPKGVSKEAGLALVASELGLSMDDVVAIGHQ-YDDLPMIELAG---LGVAMGNAVPE-IKR-----KADWVTRSNDEQ 264 (290)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHHHSS---EEEECTTSCHH-HHH-----HSSEECCCTTTT
T ss_pred EEEECCCCHHHHHHHHHHHcCCCHHHEEEECCc-hhhHHHHHhcC---CEEEecCCcHH-HHH-----hcCEECCCCCcc
Confidence 345678889999999999999999999999999 99999999999 89999998754 443 68999999776
Q ss_pred -HHHhh
Q 022007 298 -ILELL 302 (304)
Q Consensus 298 -l~~~l 302 (304)
+.++|
T Consensus 265 Gv~~~i 270 (290)
T 3dnp_A 265 GVAYMM 270 (290)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 55544
No 47
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=99.68 E-value=2.3e-17 Score=127.99 Aligned_cols=51 Identities=14% Similarity=0.096 Sum_probs=47.7
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCC
Q 022007 223 VGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVT 274 (304)
Q Consensus 223 ~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~ 274 (304)
.+||+|++|+.+++++|++|++++||||+ .+|+.+|+++|+.+++|.+|..
T Consensus 72 ~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~-~~di~~a~~~G~~~i~~~~~~~ 122 (137)
T 2pr7_A 72 VEKPEEAAFQAAADAIDLPMRDCVLVDDS-ILNVRGAVEAGLVGVYYQQFDR 122 (137)
T ss_dssp CCTTSHHHHHHHHHHTTCCGGGEEEEESC-HHHHHHHHHHTCEEEECSCHHH
T ss_pred CCCCCHHHHHHHHHHcCCCcccEEEEcCC-HHHHHHHHHCCCEEEEeCChHH
Confidence 48999999999999999999999999999 7899999999999999987654
No 48
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=99.68 E-value=1.7e-18 Score=150.01 Aligned_cols=128 Identities=13% Similarity=0.053 Sum_probs=97.0
Q ss_pred CHHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCc
Q 022007 166 NYYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSR 244 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~ 244 (304)
.++++.+.++.|+++ |.+ +++||.+... .......++..+|+.+++.+....+||+|.+|+.+++++|++|++
T Consensus 107 ~~~~~~~~l~~l~~~-g~~~~i~tn~~~~~-----~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~ 180 (263)
T 3k1z_A 107 VLDGAEDTLRECRTR-GLRLAVISNFDRRL-----EGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVV 180 (263)
T ss_dssp ECTTHHHHHHHHHHT-TCEEEEEESCCTTH-----HHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGG
T ss_pred ECcCHHHHHHHHHhC-CCcEEEEeCCcHHH-----HHHHHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHH
Confidence 367888999999887 665 6789865411 111111123344555666666778999999999999999999999
Q ss_pred EEEEcCCchhhHHHHHHcCCeEEEEccCCCCcc-ccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 245 MCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQS-TLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 245 ~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~-~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
|+||||++.+|+.||+++||.+++|.+|..... .+.. ..|+++++++.|+.++|.
T Consensus 181 ~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~----~~ad~v~~~l~el~~~l~ 236 (263)
T 3k1z_A 181 AAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDS----VPKEHILPSLAHLLPALD 236 (263)
T ss_dssp EEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHH----SCGGGEESSGGGHHHHHH
T ss_pred EEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhccc----CCCceEeCCHHHHHHHHH
Confidence 999999933999999999999999999865432 1111 369999999999998875
No 49
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=1.1e-17 Score=140.74 Aligned_cols=123 Identities=19% Similarity=0.138 Sum_probs=84.5
Q ss_pred CHHHHHHHHHHHHcCCC-ce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCC
Q 022007 166 NYYKLQYGTLCIRENPG-CL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASS 243 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~-~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~ 243 (304)
.++++.+.++.++++ | .+ +++||.+..... ......++..+|+. ....+||+|.+|+.+++++|++|+
T Consensus 106 ~~~~~~~~l~~l~~~-g~~~~~i~t~~~~~~~~----~~l~~~~~~~~f~~-----~~~~~kpk~~~~~~~~~~lgi~~~ 175 (234)
T 3ddh_A 106 LLPGVKETLKTLKET-GKYKLVVATKGDLLDQE----NKLERSGLSPYFDH-----IEVMSDKTEKEYLRLLSILQIAPS 175 (234)
T ss_dssp BCTTHHHHHHHHHHH-CCCEEEEEEESCHHHHH----HHHHHHTCGGGCSE-----EEEESCCSHHHHHHHHHHHTCCGG
T ss_pred cCccHHHHHHHHHhC-CCeEEEEEeCCchHHHH----HHHHHhCcHhhhhe-----eeecCCCCHHHHHHHHHHhCCCcc
Confidence 356777888888876 5 54 677876541100 00000001111111 234689999999999999999999
Q ss_pred cEEEEcCCchhhHHHHHHcCCeEEEEccC----CCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 244 RMCMVGDRLDTDILFGQNAGCKTLLVLSG----VTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 244 ~~~~IGD~~~~Di~~a~~aG~~ti~V~~G----~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
++++|||++.+|+.||+++|+.+++|.+| +...+... ..|+++++++.||.++|+
T Consensus 176 ~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~-----~~~d~v~~~l~el~~~l~ 234 (234)
T 3ddh_A 176 ELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFA-----HERLKQVKRLDDLLSLLG 234 (234)
T ss_dssp GEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCC-----CTTEEECSSGGGHHHHCC
T ss_pred eEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCccccc-----CCCceecccHHHHHHhcC
Confidence 99999999339999999999999999555 43332221 355999999999998874
No 50
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=99.68 E-value=5.1e-18 Score=141.97 Aligned_cols=123 Identities=16% Similarity=0.213 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHcCCCc-eEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcE
Q 022007 167 YYKLQYGTLCIRENPGC-LFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRM 245 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~ 245 (304)
++++.+.++.|++ +. ..++||....... ......++..+|+.+++.+ ..+||+|++|+.+++++|++|++|
T Consensus 86 ~~g~~~~l~~L~~--~~~l~i~T~~~~~~~~----~~l~~~gl~~~f~~i~~~~--~~~Kp~p~~~~~~~~~lg~~p~~~ 157 (210)
T 2ah5_A 86 FPQIIDLLEELSS--SYPLYITTTKDTSTAQ----DMAKNLEIHHFFDGIYGSS--PEAPHKADVIHQALQTHQLAPEQA 157 (210)
T ss_dssp CTTHHHHHHHHHT--TSCEEEEEEEEHHHHH----HHHHHTTCGGGCSEEEEEC--SSCCSHHHHHHHHHHHTTCCGGGE
T ss_pred CCCHHHHHHHHHc--CCeEEEEeCCCHHHHH----HHHHhcCchhheeeeecCC--CCCCCChHHHHHHHHHcCCCcccE
Confidence 6778888888886 55 4688997652211 1111112344566666666 678999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhh
Q 022007 246 CMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELL 302 (304)
Q Consensus 246 ~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l 302 (304)
+||||+ .+|+++|+++|+++++|.+|++..+++.. ..|+++++++.|+.++|
T Consensus 158 ~~vgDs-~~Di~~a~~aG~~~i~v~~~~~~~~~l~~----~~a~~v~~~~~el~~~l 209 (210)
T 2ah5_A 158 IIIGDT-KFDMLGARETGIQKLAITWGFGEQADLLN----YQPDYIAHKPLEVLAYF 209 (210)
T ss_dssp EEEESS-HHHHHHHHHHTCEEEEESSSSSCHHHHHT----TCCSEEESSTTHHHHHT
T ss_pred EEECCC-HHHHHHHHHCCCcEEEEcCCCCCHHHHHh----CCCCEEECCHHHHHHHh
Confidence 999999 89999999999999999999876555542 36999999999998876
No 51
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=99.66 E-value=1.5e-15 Score=132.43 Aligned_cols=68 Identities=18% Similarity=0.293 Sum_probs=59.5
Q ss_pred CcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHH
Q 022007 220 PIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSD 297 (304)
Q Consensus 220 ~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~e 297 (304)
....+++++.+++.+++++|++++++++|||+ .||++|++.+| ++|+||++.++ ++. .+++|+.+..|
T Consensus 191 i~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~-~NDi~m~~~ag---~~vam~na~~~-~k~-----~A~~v~~~~~e 258 (279)
T 4dw8_A 191 LVPQGIDKALSLSVLLENIGMTREEVIAIGDG-YNDLSMIKFAG---MGVAMGNAQEP-VKK-----AADYITLTNDE 258 (279)
T ss_dssp EECTTCCHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSS---EEEECTTSCHH-HHH-----HCSEECCCGGG
T ss_pred EecCCCChHHHHHHHHHHcCCCHHHEEEECCC-hhhHHHHHHcC---cEEEcCCCcHH-HHH-----hCCEEcCCCCC
Confidence 34567888999999999999999999999999 99999999999 99999998754 443 58999988654
No 52
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=99.65 E-value=4.7e-16 Score=134.99 Aligned_cols=68 Identities=16% Similarity=0.186 Sum_probs=60.6
Q ss_pred CcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHH
Q 022007 220 PIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSD 297 (304)
Q Consensus 220 ~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~e 297 (304)
....+++++.+++.+++++|++++++++|||+ .||++|++.+| +.|+||++.++ ++. .+++++++..|
T Consensus 194 i~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~-~NDi~m~~~ag---~~vam~na~~~-~k~-----~A~~v~~~~~e 261 (274)
T 3fzq_A 194 IIQKDFHKGKAIKRLQERLGVTQKETICFGDG-QNDIVMFQASD---VTIAMKNSHQQ-LKD-----IATSICEDIFD 261 (274)
T ss_dssp EEETTCSHHHHHHHHHHHHTCCSTTEEEECCS-GGGHHHHHTCS---EEEEETTSCHH-HHH-----HCSEEECCGGG
T ss_pred EeeCCCCHHHHHHHHHHHcCCCHHHEEEECCC-hhHHHHHHhcC---ceEEecCccHH-HHH-----hhhheeCCCch
Confidence 46678899999999999999999999999999 99999999999 99999998755 443 68999998764
No 53
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=99.64 E-value=3.1e-15 Score=125.97 Aligned_cols=74 Identities=30% Similarity=0.376 Sum_probs=66.8
Q ss_pred ccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHh
Q 022007 222 VVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILEL 301 (304)
Q Consensus 222 ~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~ 301 (304)
..+||+|++|+.+++++|++|+++++|||+ .+|+.+|+++|+.+++|.+|+...+. ..|+++++++.|+.++
T Consensus 136 ~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~-~~Di~~a~~aG~~~i~v~~g~~~~~~-------~~~~~~~~~~~el~~~ 207 (222)
T 2nyv_A 136 GEKKPSPTPVLKTLEILGEEPEKALIVGDT-DADIEAGKRAGTKTALALWGYVKLNS-------QIPDFTLSRPSDLVKL 207 (222)
T ss_dssp CTTCCTTHHHHHHHHHHTCCGGGEEEEESS-HHHHHHHHHHTCEEEEETTSSCSCCC-------CCCSEEESSTTHHHHH
T ss_pred CCCCCChHHHHHHHHHhCCCchhEEEECCC-HHHHHHHHHCCCeEEEEcCCCCCccc-------cCCCEEECCHHHHHHH
Confidence 348999999999999999999999999999 99999999999999999999765433 2699999999999988
Q ss_pred hh
Q 022007 302 LG 303 (304)
Q Consensus 302 l~ 303 (304)
|.
T Consensus 208 l~ 209 (222)
T 2nyv_A 208 MD 209 (222)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 54
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=99.63 E-value=5.2e-16 Score=135.94 Aligned_cols=75 Identities=20% Similarity=0.251 Sum_probs=64.1
Q ss_pred CCcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHH-
Q 022007 219 EPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSD- 297 (304)
Q Consensus 219 ~~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~e- 297 (304)
+....+.+++.+++.+++++|++++++++|||+ .||++|++.+| +.|+||++.++ ++. .+++|+.+..|
T Consensus 204 ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~-~NDi~ml~~ag---~~vam~na~~~-~k~-----~A~~v~~s~~ed 273 (283)
T 3dao_A 204 DCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDN-LNDIEMLQNAG---ISYAVSNARQE-VIA-----AAKHTCAPYWEN 273 (283)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHHHSS---EEEEETTSCHH-HHH-----HSSEEECCGGGT
T ss_pred EEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCC-HHHHHHHHhCC---CEEEcCCCCHH-HHH-----hcCeECCCCCCC
Confidence 345667788999999999999999999999999 99999999999 99999998754 443 68999999876
Q ss_pred -HHHhhh
Q 022007 298 -ILELLG 303 (304)
Q Consensus 298 -l~~~l~ 303 (304)
+..+|+
T Consensus 274 Gv~~~l~ 280 (283)
T 3dao_A 274 GVLSVLK 280 (283)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 555543
No 55
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=99.63 E-value=1.5e-17 Score=140.59 Aligned_cols=115 Identities=13% Similarity=0.131 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcE
Q 022007 167 YYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRM 245 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~ 245 (304)
++++.+.++.|+++ |.+ +++||.+. . .......++..+|+.+++.+....+||+|++|+.+++++|++|+++
T Consensus 94 ~~~~~~~l~~l~~~-g~~~~i~t~~~~-~-----~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 166 (233)
T 3nas_A 94 LPGIGRLLCQLKNE-NIKIGLASSSRN-A-----PKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADC 166 (233)
T ss_dssp CTTHHHHHHHHHHT-TCEEEECCSCTT-H-----HHHHHHTTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGE
T ss_pred CcCHHHHHHHHHHC-CCcEEEEcCchh-H-----HHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHE
Confidence 56778888888887 665 66788643 1 1111111233456667778888899999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHH
Q 022007 246 CMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDIL 299 (304)
Q Consensus 246 ~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~ 299 (304)
+||||+ .+|+.||+++|+.++++.+. +++. .|+++++++.|+.
T Consensus 167 i~vGDs-~~Di~~a~~aG~~~~~~~~~----~~~~------~ad~v~~s~~el~ 209 (233)
T 3nas_A 167 AAIEDA-EAGISAIKSAGMFAVGVGQG----QPML------GADLVVRQTSDLT 209 (233)
T ss_dssp EEEECS-HHHHHHHHHTTCEEEECC-----------------CSEECSSGGGCC
T ss_pred EEEeCC-HHHHHHHHHcCCEEEEECCc----cccc------cCCEEeCChHhCC
Confidence 999999 89999999999999988543 2222 6999999998874
No 56
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=99.63 E-value=5.2e-17 Score=140.28 Aligned_cols=127 Identities=15% Similarity=0.148 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHH-HHhhCCCCcccCCCcHHHHHHHHHHcCCCC-C
Q 022007 167 YYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAM-CASTEKEPIVVGKPSTFMMEILSKKFQIAS-S 243 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~gKP~~~~~~~al~~lg~~~-~ 243 (304)
++++.+.+..++++ +.+ .++||....... ......++..++ +.+++.+....+||+|.+|+.+++++|+++ +
T Consensus 105 ~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 179 (267)
T 1swv_A 105 INGVKEVIASLRER-GIKIGSTTGYTREMMD----IVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMN 179 (267)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEBCSSCHHHHH----HHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGG
T ss_pred CccHHHHHHHHHHc-CCeEEEEcCCCHHHHH----HHHHHcCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCCc
Confidence 56677778888776 555 667776541110 011111111222 334455667789999999999999999999 9
Q ss_pred cEEEEcCCchhhHHHHHHcCCeEEEEccCCCC-----------------------ccccCCCCCCCCCcEEECCHHHHHH
Q 022007 244 RMCMVGDRLDTDILFGQNAGCKTLLVLSGVTT-----------------------QSTLQDPSNNIQPDYYTNQVSDILE 300 (304)
Q Consensus 244 ~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~-----------------------~~~~~~~~~~~~pd~v~~~l~el~~ 300 (304)
++++|||+ .+|++||+++|+.+++|.+|+.. .+++.. ..||++++++.|+.+
T Consensus 180 ~~i~iGD~-~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ad~v~~~~~el~~ 254 (267)
T 1swv_A 180 HMIKVGDT-VSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVE----NGAHFTIETMQELES 254 (267)
T ss_dssp GEEEEESS-HHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHH----TTCSEEESSGGGHHH
T ss_pred CEEEEeCC-HHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHh----cCCceeccCHHHHHH
Confidence 99999999 79999999999999999999863 222222 369999999999988
Q ss_pred hhh
Q 022007 301 LLG 303 (304)
Q Consensus 301 ~l~ 303 (304)
+|.
T Consensus 255 ~l~ 257 (267)
T 1swv_A 255 VME 257 (267)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 57
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=99.63 E-value=7.2e-16 Score=132.04 Aligned_cols=121 Identities=12% Similarity=0.061 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcE
Q 022007 167 YYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRM 245 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~ 245 (304)
++++.+.++.++ + +.+ +++||....... ......++..+|+ .....+||+|++|+.+++++|++|+++
T Consensus 114 ~~~~~~~l~~l~-~-~~~~~i~t~~~~~~~~----~~l~~~~l~~~f~-----~i~~~~kp~~~~~~~~~~~l~~~~~~~ 182 (251)
T 2pke_A 114 IAGVREAVAAIA-A-DYAVVLITKGDLFHQE----QKIEQSGLSDLFP-----RIEVVSEKDPQTYARVLSEFDLPAERF 182 (251)
T ss_dssp CTTHHHHHHHHH-T-TSEEEEEEESCHHHHH----HHHHHHSGGGTCC-----CEEEESCCSHHHHHHHHHHHTCCGGGE
T ss_pred CccHHHHHHHHH-C-CCEEEEEeCCCHHHHH----HHHHHcCcHHhCc-----eeeeeCCCCHHHHHHHHHHhCcCchhE
Confidence 567788888888 5 665 678886541100 0000000111111 123358999999999999999999999
Q ss_pred EEEcCCch-hhHHHHHHcCCeEEEEccCCCCcc---c-cCCCCCCCCCcE-EECCHHHHHHhhh
Q 022007 246 CMVGDRLD-TDILFGQNAGCKTLLVLSGVTTQS---T-LQDPSNNIQPDY-YTNQVSDILELLG 303 (304)
Q Consensus 246 ~~IGD~~~-~Di~~a~~aG~~ti~V~~G~~~~~---~-~~~~~~~~~pd~-v~~~l~el~~~l~ 303 (304)
++|||+ . +|+.||+++|+.+++|.+|..... + +. ...|++ +++++.|+.++|.
T Consensus 183 i~iGD~-~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~----~~~~~~~~i~~~~el~~~l~ 241 (251)
T 2pke_A 183 VMIGNS-LRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVA----ADEPRLREVPDPSGWPAAVR 241 (251)
T ss_dssp EEEESC-CCCCCHHHHHTTCEEEECCCC-----------------CCTTEEECSSGGGHHHHHH
T ss_pred EEECCC-chhhHHHHHHCCCEEEEECCCCccccccccccc----cCCCCeeeeCCHHHHHHHHH
Confidence 999999 6 999999999999999998865321 1 21 147998 9999999988774
No 58
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=99.63 E-value=2.1e-16 Score=137.94 Aligned_cols=128 Identities=14% Similarity=0.116 Sum_probs=91.0
Q ss_pred CHHHHHHHHHHHHcCCCc--e-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCC----cccCCCcHHHHHHHHHHc
Q 022007 166 NYYKLQYGTLCIRENPGC--L-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEP----IVVGKPSTFMMEILSKKF 238 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~--~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~----~~~gKP~~~~~~~al~~l 238 (304)
.++++.+.++.|+++ |. + +++||....... ......++..+|+.+++.+. ...+||+|.+|+.+++++
T Consensus 143 ~~p~~~~~L~~L~~~-g~~~~l~i~Tn~~~~~~~----~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~l 217 (282)
T 3nuq_A 143 PDIPLRNMLLRLRQS-GKIDKLWLFTNAYKNHAI----RCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKES 217 (282)
T ss_dssp CCHHHHHHHHHHHHS-SSCSEEEEECSSCHHHHH----HHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHH
T ss_pred cChhHHHHHHHHHhC-CCCceEEEEECCChHHHH----HHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHc
Confidence 578999999999887 65 4 678887652210 01111112233444444433 256799999999999999
Q ss_pred CCCC-CcEEEEcCCchhhHHHHHHcCC-eEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 239 QIAS-SRMCMVGDRLDTDILFGQNAGC-KTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 239 g~~~-~~~~~IGD~~~~Di~~a~~aG~-~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
|++| ++++||||+ .+|+.||+++|+ .++++..+..... .. ....|+++++++.||.++|.
T Consensus 218 gi~~~~~~i~vGD~-~~Di~~a~~aG~~~~~~~~~~~~~~~-~~---~~~~ad~vi~sl~el~~~l~ 279 (282)
T 3nuq_A 218 GLARYENAYFIDDS-GKNIETGIKLGMKTCIHLVENEVNEI-LG---QTPEGAIVISDILELPHVVS 279 (282)
T ss_dssp TCCCGGGEEEEESC-HHHHHHHHHHTCSEEEEECSCCC-----C---CCCTTCEEESSGGGGGGTSG
T ss_pred CCCCcccEEEEcCC-HHHHHHHHHCCCeEEEEEcCCccccc-cc---cCCCCCEEeCCHHHHHHHhh
Confidence 9999 999999999 799999999999 6777777654321 11 12478999999999998775
No 59
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=99.62 E-value=1.4e-15 Score=129.09 Aligned_cols=76 Identities=21% Similarity=0.362 Sum_probs=68.7
Q ss_pred ccCCCcHHHHHHHHHHcCCC-CCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHH
Q 022007 222 VVGKPSTFMMEILSKKFQIA-SSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILE 300 (304)
Q Consensus 222 ~~gKP~~~~~~~al~~lg~~-~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~ 300 (304)
..+||+|.+|+.+++++|++ |+++++|||+ .+|+.||+++|+.+++|.+|+...+++.. ..|+++++++.|+.+
T Consensus 163 ~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~-~~Di~~a~~aG~~~i~v~~g~~~~~~~~~----~~ad~v~~~~~el~~ 237 (240)
T 3sd7_A 163 GTRVNKNEVIQYVLDLCNVKDKDKVIMVGDR-KYDIIGAKKIGIDSIGVLYGYGSFEEISE----SEPTYIVENVESIKD 237 (240)
T ss_dssp SCCCCHHHHHHHHHHHHTCCCGGGEEEEESS-HHHHHHHHHHTCEEEEESSSSCCHHHHHH----HCCSEEESSSTTHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCcEEEECCC-HHHHHHHHHCCCCEEEEeCCCCCHHHHhh----cCCCEEECCHHHHHH
Confidence 45899999999999999999 9999999999 79999999999999999999887665522 279999999999998
Q ss_pred hh
Q 022007 301 LL 302 (304)
Q Consensus 301 ~l 302 (304)
+|
T Consensus 238 ~l 239 (240)
T 3sd7_A 238 IL 239 (240)
T ss_dssp HH
T ss_pred Hh
Confidence 76
No 60
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=99.62 E-value=4.2e-15 Score=126.25 Aligned_cols=209 Identities=13% Similarity=0.092 Sum_probs=122.9
Q ss_pred cCEEEEeE--EEEcCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHHHHHHHHHh
Q 022007 25 VDAFLFDC--VIWKGDK-LIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSFAAAMYLKV 101 (304)
Q Consensus 25 ~k~i~fDi--tL~~~~~-~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~~l~~ 101 (304)
+|+|+||+ ||+++.. +.+.+.++|++|+++|++++++|+ |+...+.+.++.+|++.. ++...-+ ++..
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~i~TG---R~~~~~~~~~~~l~~~~~---~i~~nGa---~i~~ 73 (231)
T 1wr8_A 3 IKAISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVTG---NTVQFAEAASILIGTSGP---VVAEDGG---AISY 73 (231)
T ss_dssp CCEEEEESTTTTBCTTSCBCHHHHHHHHHHHHTTCCEEEECS---SCHHHHHHHHHHHTCCSC---EEEGGGT---EEEE
T ss_pred eeEEEEECCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcC---CChhHHHHHHHHcCCCCe---EEEeCCc---EEEe
Confidence 79999999 9998765 556789999999999999999999 888888888888887632 2211100 0000
Q ss_pred CCCCCCCeEEEEcChh---HHHHHH-Hc-CCcccCCCCCcchhhhhccccccccCCCccEEEEecCCCCCHHHHHHHHHH
Q 022007 102 NNFPQENKVYVIGGEG---ILEELR-QA-GYTGLGGPEDGEKRVQLKSNCLFEHDKNVGAVVVGLDPHINYYKLQYGTLC 176 (304)
Q Consensus 102 ~~~~~~~~v~~~g~~~---~~~~l~-~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~ 176 (304)
.+ +.++...-+. +.+.++ +. |+.... . . .+. ...+.+. ..+.....+...++.
T Consensus 74 ~~----~~~~~~~l~~~~~i~~~~~~~~~~~~~~~--~---~--------~~~----~~~~~~~-~~~~~~~~~~~~~~~ 131 (231)
T 1wr8_A 74 KK----KRIFLASMDEEWILWNEIRKRFPNARTSY--T---M--------PDR----RAGLVIM-RETINVETVREIINE 131 (231)
T ss_dssp TT----EEEESCCCSHHHHHHHHHHHHCTTCCBCT--T---G--------GGC----SSCEEEC-TTTSCHHHHHHHHHH
T ss_pred CC----EEEEeccHHHHHHHHHHHHHhCCCceEEe--c---C--------CCc----eeeEEEE-CCCCCHHHHHHHHHh
Confidence 00 0010000012 223333 32 332200 0 0 000 0001111 111122233332222
Q ss_pred HHcCCCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhH
Q 022007 177 IRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDI 256 (304)
Q Consensus 177 l~~~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di 256 (304)
+. +...++ +++. ..+....+||++.+++.+++++|++++++++|||+ .+|+
T Consensus 132 ~~--~~~~~~-~~~~-------------------------~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~-~nD~ 182 (231)
T 1wr8_A 132 LN--LNLVAV-DSGF-------------------------AIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG-ENDL 182 (231)
T ss_dssp TT--CSCEEE-ECSS-------------------------CEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS-GGGH
T ss_pred cC--CcEEEE-ecCc-------------------------EEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC-HHHH
Confidence 11 012222 2211 11334568999999999999999999999999999 8999
Q ss_pred HHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHH--HHHhh
Q 022007 257 LFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSD--ILELL 302 (304)
Q Consensus 257 ~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~e--l~~~l 302 (304)
.|++.+| +.|.+|++.+ +++. .|++++++..+ +.++|
T Consensus 183 ~~~~~ag---~~v~~~~~~~-~~~~-----~a~~v~~~~~e~Gv~~~l 221 (231)
T 1wr8_A 183 DAFKVVG---YKVAVAQAPK-ILKE-----NADYVTKKEYGEGGAEAI 221 (231)
T ss_dssp HHHHHSS---EEEECTTSCH-HHHT-----TCSEECSSCHHHHHHHHH
T ss_pred HHHHHcC---CeEEecCCCH-HHHh-----hCCEEecCCCcchHHHHH
Confidence 9999999 4566777654 3443 68999998765 44443
No 61
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=99.61 E-value=5.8e-15 Score=125.58 Aligned_cols=79 Identities=29% Similarity=0.413 Sum_probs=67.2
Q ss_pred ccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHh
Q 022007 222 VVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILEL 301 (304)
Q Consensus 222 ~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~ 301 (304)
..+||+|++|+.+++++|++|+++++|||++.+|+.||+++|+.+++|.+|......+.. ...|+++++++.|+.++
T Consensus 147 ~~~Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~---~~~~~~~i~~~~el~~~ 223 (241)
T 2hoq_A 147 GVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEY---RKYADYEIDNLESLLEV 223 (241)
T ss_dssp TCCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTT---GGGCSEEESSTTHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccc---cCCCCEEECCHHHHHHH
Confidence 358999999999999999999999999999339999999999999999998766444310 12689999999999987
Q ss_pred hh
Q 022007 302 LG 303 (304)
Q Consensus 302 l~ 303 (304)
|.
T Consensus 224 l~ 225 (241)
T 2hoq_A 224 LA 225 (241)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 62
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=99.61 E-value=6.3e-15 Score=128.40 Aligned_cols=67 Identities=15% Similarity=0.200 Sum_probs=49.4
Q ss_pred cccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHH
Q 022007 221 IVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSD 297 (304)
Q Consensus 221 ~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~e 297 (304)
...+..++.+++.+++++|++++++++|||+ .||++|++.+| +.|+||++.++ ++. .+++|+.+..|
T Consensus 192 ~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~-~NDi~m~~~ag---~~vam~na~~~-~k~-----~A~~v~~~~~e 258 (279)
T 3mpo_A 192 MNRRASKGGTLSELVDQLGLTADDVMTLGDQ-GNDLTMIKYAG---LGVAMGNAIDE-VKE-----AAQAVTLTNAE 258 (279)
T ss_dssp EESSCCHHHHHHHHHHHTTCCGGGEEEC--C-CTTHHHHHHST---EECBC---CCH-HHH-----HCSCBC-----
T ss_pred ecCCCChHHHHHHHHHHcCCCHHHEEEECCc-hhhHHHHHhcC---ceeeccCCCHH-HHH-----hcceeccCCCc
Confidence 3455668999999999999999999999999 89999999999 99999998754 443 58888887654
No 63
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=99.60 E-value=9.7e-15 Score=120.81 Aligned_cols=73 Identities=16% Similarity=0.241 Sum_probs=64.4
Q ss_pred ccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHh
Q 022007 222 VVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILEL 301 (304)
Q Consensus 222 ~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~ 301 (304)
..+||+|.+|+.+++++|++|+++++|||+ .+|+.||+++|+.++++.+|...... ..|+++++++.|+.++
T Consensus 142 ~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~-~~Di~~a~~aG~~~~~~~~~~~~~~~-------~~a~~~~~~~~el~~~ 213 (214)
T 3e58_A 142 KESKPNPEIYLTALKQLNVQASRALIIEDS-EKGIAAGVAADVEVWAIRDNEFGMDQ-------SAAKGLLDSLTDVLDL 213 (214)
T ss_dssp SSCTTSSHHHHHHHHHHTCCGGGEEEEECS-HHHHHHHHHTTCEEEEECCSSSCCCC-------TTSSEEESSGGGGGGG
T ss_pred cCCCCChHHHHHHHHHcCCChHHeEEEecc-HhhHHHHHHCCCEEEEECCCCccchh-------ccHHHHHHHHHHHHhh
Confidence 358999999999999999999999999999 89999999999999999887544321 3799999999999876
Q ss_pred h
Q 022007 302 L 302 (304)
Q Consensus 302 l 302 (304)
|
T Consensus 214 i 214 (214)
T 3e58_A 214 I 214 (214)
T ss_dssp C
T ss_pred C
Confidence 4
No 64
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=99.60 E-value=3.9e-15 Score=122.32 Aligned_cols=50 Identities=20% Similarity=0.238 Sum_probs=46.4
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCC
Q 022007 225 KPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTT 275 (304)
Q Consensus 225 KP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~ 275 (304)
+|+|+.|+.+++++|++|++++||||+ .+|+.+|+++|+++++|.+|...
T Consensus 120 ~~k~~~~~~~~~~~~~~~~~~~~igD~-~~Di~~a~~aG~~~i~v~~g~~~ 169 (187)
T 2wm8_A 120 GSKITHFERLQQKTGIPFSQMIFFDDE-RRNIVDVSKLGVTCIHIQNGMNL 169 (187)
T ss_dssp SCHHHHHHHHHHHHCCCGGGEEEEESC-HHHHHHHHTTTCEEEECSSSCCH
T ss_pred CchHHHHHHHHHHcCCChHHEEEEeCC-ccChHHHHHcCCEEEEECCCCCh
Confidence 466888999999999999999999999 89999999999999999999754
No 65
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=99.59 E-value=8.9e-15 Score=124.96 Aligned_cols=77 Identities=25% Similarity=0.412 Sum_probs=66.7
Q ss_pred ccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHh
Q 022007 222 VVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILEL 301 (304)
Q Consensus 222 ~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~ 301 (304)
...||+|.+|+.+++++|+++++++||||+ .+|+.+|+++|+.+++|.+|.....++.. ..|+++++++.|+.++
T Consensus 167 ~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~-~~Di~~a~~aG~~~i~v~~g~~~~~~~~~----~~ad~vi~~~~el~~~ 241 (243)
T 2hsz_A 167 PEIKPHPAPFYYLCGKFGLYPKQILFVGDS-QNDIFAAHSAGCAVVGLTYGYNYNIPIAQ----SKPDWIFDDFADILKI 241 (243)
T ss_dssp SSCTTSSHHHHHHHHHHTCCGGGEEEEESS-HHHHHHHHHHTCEEEEESSSCSTTCCGGG----GCCSEEESSGGGGGGG
T ss_pred CCCCcCHHHHHHHHHHhCcChhhEEEEcCC-HHHHHHHHHCCCeEEEEcCCCCchhhhhh----CCCCEEECCHHHHHHH
Confidence 347999999999999999999999999999 79999999999999999999764333322 3799999999999877
Q ss_pred hh
Q 022007 302 LG 303 (304)
Q Consensus 302 l~ 303 (304)
|+
T Consensus 242 l~ 243 (243)
T 2hsz_A 242 TQ 243 (243)
T ss_dssp TC
T ss_pred hC
Confidence 63
No 66
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=99.59 E-value=6.5e-16 Score=125.92 Aligned_cols=53 Identities=23% Similarity=0.269 Sum_probs=45.0
Q ss_pred cccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCC
Q 022007 221 IVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVT 274 (304)
Q Consensus 221 ~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~ 274 (304)
...+||+|++|+.+++++|++|++++||||+ .+|+.+|+++||++++|.+|..
T Consensus 112 ~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~-~~Di~~A~~aG~~~i~v~~~~~ 164 (176)
T 2fpr_A 112 CDCRKPKVKLVERYLAEQAMDRANSYVIGDR-ATDIQLAENMGINGLRYDRETL 164 (176)
T ss_dssp CSSSTTSCGGGGGGC----CCGGGCEEEESS-HHHHHHHHHHTSEEEECBTTTB
T ss_pred ccccCCCHHHHHHHHHHcCCCHHHEEEEcCC-HHHHHHHHHcCCeEEEEcCCcc
Confidence 3458999999999999999999999999999 7999999999999999988743
No 67
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=99.59 E-value=5.3e-16 Score=133.31 Aligned_cols=118 Identities=8% Similarity=0.033 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHcCCCceEEE-ecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcE
Q 022007 167 YYKLQYGTLCIRENPGCLFIA-TNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRM 245 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~~~i~-tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~ 245 (304)
++++.+.+..|+++ +.++.+ ++... . ...+...++..+|+.+++.+.+..+||+|++|+.+++++|++|++|
T Consensus 118 ~p~~~~ll~~Lk~~-g~~i~i~~~~~~-~-----~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~ 190 (250)
T 4gib_A 118 LPGIESLLIDVKSN-NIKIGLSSASKN-A-----INVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNC 190 (250)
T ss_dssp CTTHHHHHHHHHHT-TCEEEECCSCTT-H-----HHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred chhHHHHHHHHHhc-ccccccccccch-h-----hhHhhhcccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHe
Confidence 67788888999887 766444 33322 1 1122233355677888888889999999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHH-HHhh
Q 022007 246 CMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDI-LELL 302 (304)
Q Consensus 246 ~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el-~~~l 302 (304)
+||||+ .+|+++|+++||++|+|.+ .+++. .||++++++.|| .+.|
T Consensus 191 l~VGDs-~~Di~aA~~aG~~~i~v~~----~~~~~------~ad~vi~~l~eL~~~~i 237 (250)
T 4gib_A 191 IGIEDA-SAGIDAINSANMFSVGVGN----YENLK------KANLVVDSTNQLKFEYI 237 (250)
T ss_dssp EEEESS-HHHHHHHHHTTCEEEEESC----TTTTT------TSSEEESSGGGCCHHHH
T ss_pred EEECCC-HHHHHHHHHcCCEEEEECC----hhHhc------cCCEEECChHhCCHHHH
Confidence 999999 7999999999999999943 23332 589999999998 4444
No 68
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=99.58 E-value=8.6e-16 Score=132.90 Aligned_cols=128 Identities=23% Similarity=0.163 Sum_probs=96.4
Q ss_pred CHHHHHHHHHHHHcCCCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcE
Q 022007 166 NYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRM 245 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~ 245 (304)
.|+++.+.++.|++. ...+++||.+..... ......++..+|+.+++.+....+||+|++|+.+++++|++|++|
T Consensus 122 ~~~g~~~~L~~L~~~-~~l~i~Tn~~~~~~~----~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 196 (260)
T 2gfh_A 122 LADDVKAMLTELRKE-VRLLLLTNGDRQTQR----EKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDC 196 (260)
T ss_dssp CCHHHHHHHHHHHTT-SEEEEEECSCHHHHH----HHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGE
T ss_pred CCcCHHHHHHHHHcC-CcEEEEECcChHHHH----HHHHhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 478999999999873 445789998763211 111112233455666666777789999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCC-eEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 246 CMVGDRLDTDILFGQNAGC-KTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 246 ~~IGD~~~~Di~~a~~aG~-~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
+||||+..+|+++|+++|| .+++|.++........ ..|+++++++.|+.++|.
T Consensus 197 ~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~-----~~~~~~i~~~~el~~~l~ 250 (260)
T 2gfh_A 197 VMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSS-----PMPHYMVSSVLELPALLQ 250 (260)
T ss_dssp EEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCC-----CCCSEEESSGGGHHHHHH
T ss_pred EEECCCchhhHHHHHHCCCceEEEEcCCCCCcCccc-----CCCCEEECCHHHHHHHHH
Confidence 9999954899999999999 8999977643211111 479999999999988764
No 69
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=99.58 E-value=1.2e-14 Score=128.60 Aligned_cols=73 Identities=16% Similarity=0.292 Sum_probs=62.5
Q ss_pred CcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHH--
Q 022007 220 PIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSD-- 297 (304)
Q Consensus 220 ~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~e-- 297 (304)
....+.+++.+++.+++++|++++++++|||+ .||++|++.+| +.|+||++.++ ++. .+++|+++..|
T Consensus 222 i~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs-~NDi~m~~~ag---~~vam~na~~~-~k~-----~Ad~v~~~~~edG 291 (304)
T 3l7y_A 222 IITKGLHKGWALQQLLKRWNFTSDHLMAFGDG-GNDIEMLKLAK---YSYAMANAPKN-VKA-----AANYQAKSNDESG 291 (304)
T ss_dssp EEETTCSHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHHHCT---EEEECTTSCHH-HHH-----HCSEECCCGGGTH
T ss_pred EEcCCCCHHHHHHHHHHHhCcCHHHEEEECCC-HHHHHHHHhcC---CeEEcCCcCHH-HHH-----hccEEcCCCCcch
Confidence 35667788999999999999999999999999 99999999999 99999998754 443 68999999776
Q ss_pred HHHhh
Q 022007 298 ILELL 302 (304)
Q Consensus 298 l~~~l 302 (304)
+.++|
T Consensus 292 v~~~l 296 (304)
T 3l7y_A 292 VLDVI 296 (304)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
No 70
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=99.57 E-value=7.9e-15 Score=117.47 Aligned_cols=64 Identities=16% Similarity=0.248 Sum_probs=50.3
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHH
Q 022007 224 GKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSD 297 (304)
Q Consensus 224 gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~e 297 (304)
+||+|.+|+.++++++++|++++||||+ .+|+.+|+++|+.++ +.+ +. +.+.. .++++++++.+
T Consensus 82 ~kp~~~~~~~~~~~~~~~~~~~~~vGD~-~~Di~~a~~ag~~~~-~~~--~~-~~~~~-----~a~~v~~~~~~ 145 (162)
T 2p9j_A 82 SYKKLEIYEKIKEKYSLKDEEIGFIGDD-VVDIEVMKKVGFPVA-VRN--AV-EEVRK-----VAVYITQRNGG 145 (162)
T ss_dssp C--CHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHHHSSEEEE-CTT--SC-HHHHH-----HCSEECSSCSS
T ss_pred CCCCHHHHHHHHHHcCCCHHHEEEECCC-HHHHHHHHHCCCeEE-ecC--cc-HHHHh-----hCCEEecCCCC
Confidence 6899999999999999999999999999 799999999998755 333 22 23332 58999998654
No 71
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=99.57 E-value=3.7e-15 Score=123.03 Aligned_cols=68 Identities=18% Similarity=0.281 Sum_probs=56.0
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECC------HHHH
Q 022007 225 KPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQ------VSDI 298 (304)
Q Consensus 225 KP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~------l~el 298 (304)
||+|++++.+++++++++++++||||+ .+|+.+++++|+. +.+++..+ .+.. .+++++.+ +.++
T Consensus 93 kpk~~~~~~~~~~~~~~~~~~~~vGD~-~~Di~~~~~ag~~---~~~~~~~~-~~~~-----~ad~v~~~~~~~g~~~~l 162 (191)
T 3n1u_A 93 VDKRSAYQHLKKTLGLNDDEFAYIGDD-LPDLPLIQQVGLG---VAVSNAVP-QVLE-----FADWRTERTGGRGAVREL 162 (191)
T ss_dssp SSCHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSSEE---EECTTCCH-HHHH-----HSSEECSSCTTTTHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCC-HHHHHHHHHCCCE---EEeCCccH-HHHH-----hCCEEecCCCCCcHHHHH
Confidence 899999999999999999999999999 7999999999954 55665543 3332 68999988 6677
Q ss_pred HHhh
Q 022007 299 LELL 302 (304)
Q Consensus 299 ~~~l 302 (304)
.++|
T Consensus 163 ~~~l 166 (191)
T 3n1u_A 163 CDLI 166 (191)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7655
No 72
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=99.56 E-value=3.4e-14 Score=121.82 Aligned_cols=76 Identities=17% Similarity=0.195 Sum_probs=65.0
Q ss_pred ccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEcc-----------------------CCCCccc
Q 022007 222 VVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLS-----------------------GVTTQST 278 (304)
Q Consensus 222 ~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~-----------------------G~~~~~~ 278 (304)
..+||+|.+|+.+++++|++|++|+||||+ .+|+.+|+++|+.++++.+ |....+.
T Consensus 144 ~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~-~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~ 222 (253)
T 1qq5_A 144 RVFKPHPDSYALVEEVLGVTPAEVLFVSSN-GFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREET 222 (253)
T ss_dssp TCCTTSHHHHHHHHHHHCCCGGGEEEEESC-HHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCT
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHEEEEeCC-hhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCC
Confidence 358999999999999999999999999999 8999999999999999988 3332222
Q ss_pred cCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 279 LQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 279 ~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
.. ..|+++++++.|+.++|.
T Consensus 223 ~~-----~~~~~~~~~~~el~~~l~ 242 (253)
T 1qq5_A 223 YA-----EAPDFVVPALGDLPRLVR 242 (253)
T ss_dssp TS-----CCCSEEESSGGGHHHHHH
T ss_pred CC-----CCCCeeeCCHHHHHHHHH
Confidence 22 479999999999998774
No 73
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=99.56 E-value=5.9e-15 Score=127.80 Aligned_cols=69 Identities=22% Similarity=0.380 Sum_probs=60.7
Q ss_pred CCcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHH
Q 022007 219 EPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSD 297 (304)
Q Consensus 219 ~~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~e 297 (304)
+....+.+++.+++.+++++|++++++++|||+ .||++|++.+| +.|+||++.++ ++. .+++++.+..|
T Consensus 187 ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~-~NDi~m~~~ag---~~vam~na~~~-~k~-----~Ad~v~~~~~e 255 (268)
T 3r4c_A 187 DVNVAGTSKATGLSLFADYYRVKVSEIMACGDG-GNDIPMLKAAG---IGVAMGNASEK-VQS-----VADFVTDTVDN 255 (268)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHHHSS---EEEECTTSCHH-HHH-----TCSEECCCTTT
T ss_pred EEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCc-HHhHHHHHhCC---CeEEeCCCcHH-HHH-----hcCEeeCCCCc
Confidence 446677888999999999999999999999999 99999999999 99999998754 443 68999998754
No 74
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=99.55 E-value=1.3e-15 Score=128.74 Aligned_cols=111 Identities=12% Similarity=0.069 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHcCCCceEEEecCCCccCCCCCccc-c-ChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCc
Q 022007 167 YYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEW-P-GAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSR 244 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~-~-~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~ 244 (304)
++++.+.++.|+++ ...+++||.+..........+ . ...++..+|+.+++.+....+||+|++|+.+++++|++|++
T Consensus 114 ~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~~~ 192 (229)
T 4dcc_A 114 PTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPKE 192 (229)
T ss_dssp CHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred cHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCHHH
Confidence 57888999999875 445788997763221000001 0 22346677887777788889999999999999999999999
Q ss_pred EEEEcCCchhhHHHHHHcCCeEEEEccCCCCcccc
Q 022007 245 MCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTL 279 (304)
Q Consensus 245 ~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~ 279 (304)
|+||||+ .+|+++|+++|+.+++|.+|....+.+
T Consensus 193 ~~~vGD~-~~Di~~a~~aG~~~i~v~~~~~~k~~L 226 (229)
T 4dcc_A 193 TFFIDDS-EINCKVAQELGISTYTPKAGEDWSHLF 226 (229)
T ss_dssp EEEECSC-HHHHHHHHHTTCEEECCCTTCCGGGGG
T ss_pred eEEECCC-HHHHHHHHHcCCEEEEECCHHHHHHHh
Confidence 9999999 799999999999999998886554433
No 75
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=99.55 E-value=6.1e-14 Score=122.77 Aligned_cols=68 Identities=19% Similarity=0.125 Sum_probs=57.0
Q ss_pred CcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCc--EEECCHHH
Q 022007 220 PIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPD--YYTNQVSD 297 (304)
Q Consensus 220 ~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd--~v~~~l~e 297 (304)
....+.+++.+++.+++++|++++++++|||+ .||++|++.+| +.|+||++.++ ++. .++ +++.+.+|
T Consensus 203 i~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~-~NDi~ml~~ag---~~vAm~Na~~~-vk~-----~A~~~~v~~sn~e 272 (285)
T 3pgv_A 203 VMAGGVSKGHALEAVAKMLGYTLSDCIAFGDG-MNDAEMLSMAG---KGCIMANAHQR-LKD-----LHPELEVIGSNAD 272 (285)
T ss_dssp EEETTCSHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHHHSS---EEEECTTSCHH-HHH-----HCTTSEECCCGGG
T ss_pred EecCCCChHHHHHHHHHHhCCCHHHEEEECCc-HhhHHHHHhcC---CEEEccCCCHH-HHH-----hCCCCEecccCCc
Confidence 34567788999999999999999999999999 99999999999 99999998765 443 344 57777653
No 76
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=99.55 E-value=5.9e-14 Score=122.02 Aligned_cols=69 Identities=16% Similarity=0.255 Sum_probs=59.1
Q ss_pred CCcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHH
Q 022007 219 EPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSD 297 (304)
Q Consensus 219 ~~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~e 297 (304)
+....++|++.+++.+++++|++++++++|||+ .+|+.|++.+| +.|++|++.++ ++. .+++++.+..+
T Consensus 184 ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~-~nD~~m~~~ag---~~va~~na~~~-~k~-----~a~~v~~~~~~ 252 (271)
T 1rlm_A 184 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGDS-GNDAEMLKMAR---YSFAMGNAAEN-IKQ-----IARYATDDNNH 252 (271)
T ss_dssp EEECTTCSHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHCS---EEEECTTCCHH-HHH-----HCSEECCCGGG
T ss_pred EEEcCCCChHHHHHHHHHHhCCCHHHEEEECCc-HHHHHHHHHcC---CeEEeCCccHH-HHH-----hCCeeCcCCCC
Confidence 345678999999999999999999999999999 99999999999 67788887643 443 68999988765
No 77
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=99.55 E-value=1.2e-15 Score=132.02 Aligned_cols=75 Identities=19% Similarity=0.289 Sum_probs=64.9
Q ss_pred CCcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHH-
Q 022007 219 EPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSD- 297 (304)
Q Consensus 219 ~~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~e- 297 (304)
+....++|++.+++.+++++|++++++++|||+ .+|+.|++.+| +.|.+|++.+ ++.. .+++++++..+
T Consensus 180 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~-~nD~~~~~~ag---~~v~~~n~~~-~~~~-----~a~~v~~~~~~d 249 (261)
T 2rbk_A 180 DVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDG-GNDISMLRHAA---IGVAMGQAKE-DVKA-----AADYVTAPIDED 249 (261)
T ss_dssp EEESTTCSHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSS---EEEECTTSCH-HHHH-----HSSEECCCGGGT
T ss_pred EecCCCCChHHHHHHHHHHcCCCHHHEEEECCC-HHHHHHHHHcC---ceEEecCccH-HHHh-----hCCEEeccCchh
Confidence 446789999999999999999999999999999 99999999999 6788888764 3443 68999999999
Q ss_pred -HHHhhh
Q 022007 298 -ILELLG 303 (304)
Q Consensus 298 -l~~~l~ 303 (304)
+.++|+
T Consensus 250 Gv~~~l~ 256 (261)
T 2rbk_A 250 GISKAMK 256 (261)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 877664
No 78
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=99.54 E-value=2.4e-14 Score=123.36 Aligned_cols=68 Identities=19% Similarity=0.235 Sum_probs=58.0
Q ss_pred CcccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHH
Q 022007 220 PIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSD 297 (304)
Q Consensus 220 ~~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~e 297 (304)
....+-.+..+++.+++++|++++++++|||+ .||++|++.+| +.|++|++.+ +++. .+++|+.+..+
T Consensus 177 i~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs-~NDi~ml~~ag---~~vam~na~~-~~k~-----~A~~v~~~~~~ 244 (258)
T 2pq0_A 177 VLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDG-LNDIEMLSFVG---TGVAMGNAHE-EVKR-----VADFVTKPVDK 244 (258)
T ss_dssp EEESSCCHHHHHHHHHHHHTCCGGGEEEECCS-GGGHHHHHHSS---EEEEETTCCH-HHHH-----TCSEEECCGGG
T ss_pred EEECCCChHHHHHHHHHHhCCCHHHEEEECCc-HHhHHHHHhCC---cEEEeCCCcH-HHHH-----hCCEEeCCCCc
Confidence 34556677999999999999999999999999 99999999999 7888998764 4554 68999988765
No 79
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=99.53 E-value=6.9e-16 Score=128.88 Aligned_cols=114 Identities=14% Similarity=0.065 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcE
Q 022007 167 YYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRM 245 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~ 245 (304)
++++.+.+..+++. +.+ .++||... . .......++..+|+.+++.+....+||+|++|+.+++++|++|+++
T Consensus 93 ~~~~~~~l~~l~~~-g~~~~i~t~~~~-~-----~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 165 (221)
T 2wf7_A 93 YPGILQLLKDLRSN-KIKIALASASKN-G-----PFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSES 165 (221)
T ss_dssp CTTHHHHHHHHHHT-TCEEEECCCCTT-H-----HHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGE
T ss_pred CCCHHHHHHHHHHC-CCeEEEEcCcHH-H-----HHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHe
Confidence 45566777777766 555 56777511 1 0011111123345556677778899999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHH
Q 022007 246 CMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDI 298 (304)
Q Consensus 246 ~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el 298 (304)
++|||+ .+|++||+++|+.++++.. .+++. .|+++++++.|+
T Consensus 166 i~iGD~-~nDi~~a~~aG~~~~~~~~----~~~~~------~a~~v~~~~~el 207 (221)
T 2wf7_A 166 IGLEDS-QAGIQAIKDSGALPIGVGR----PEDLG------DDIVIVPDTSHY 207 (221)
T ss_dssp EEEESS-HHHHHHHHHHTCEEEEESC----HHHHC------SSSEEESSGGGC
T ss_pred EEEeCC-HHHHHHHHHCCCEEEEECC----HHHhc------cccchhcCHHhC
Confidence 999999 8999999999999888732 23332 589999999886
No 80
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=99.53 E-value=7.7e-15 Score=117.76 Aligned_cols=68 Identities=12% Similarity=0.165 Sum_probs=56.1
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECC------HHHH
Q 022007 225 KPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQ------VSDI 298 (304)
Q Consensus 225 KP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~------l~el 298 (304)
||+|++++.++++++++|++++||||+ .+|+.+|+++|+ .+..+++.. .+.. .+++++.+ +.++
T Consensus 78 kpk~~~~~~~~~~~~~~~~~~~~vGD~-~~Di~~~~~ag~---~~~~~~~~~-~~~~-----~ad~v~~~~~~~g~~~e~ 147 (164)
T 3e8m_A 78 VDKLSAAEELCNELGINLEQVAYIGDD-LNDAKLLKRVGI---AGVPASAPF-YIRR-----LSTIFLEKRGGEGVFREF 147 (164)
T ss_dssp SCHHHHHHHHHHHHTCCGGGEEEECCS-GGGHHHHTTSSE---EECCTTSCH-HHHT-----TCSSCCCCCTTTTHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCC-HHHHHHHHHCCC---eEEcCChHH-HHHH-----hCcEEeccCCCCcHHHHH
Confidence 899999999999999999999999999 799999999994 555565543 3333 58898888 7777
Q ss_pred HHhh
Q 022007 299 LELL 302 (304)
Q Consensus 299 ~~~l 302 (304)
.+.+
T Consensus 148 ~~~l 151 (164)
T 3e8m_A 148 VEKV 151 (164)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 81
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=99.52 E-value=1.1e-15 Score=126.98 Aligned_cols=125 Identities=18% Similarity=0.094 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHcCCCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcEE
Q 022007 167 YYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMC 246 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~~ 246 (304)
++++.+.++.++++ ...+++||....... ......++..+|+.+++.+....+||+|++|+.+++++|++|++++
T Consensus 85 ~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~----~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i 159 (209)
T 2hdo_A 85 YPGITSLFEQLPSE-LRLGIVTSQRRNELE----SGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNAL 159 (209)
T ss_dssp CTTHHHHHHHSCTT-SEEEEECSSCHHHHH----HHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEE
T ss_pred CCCHHHHHHHHHhc-CcEEEEeCCCHHHHH----HHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEE
Confidence 56677777777765 445778886542111 1111112334455566667778899999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 247 MVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 247 ~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
+|||+ .+|+.+|+++|+.++++.+|+...+++. .|+++++++.|+.++|+
T Consensus 160 ~vGD~-~~Di~~a~~aG~~~~~~~~~~~~~~~~~------~a~~~~~~~~el~~~l~ 209 (209)
T 2hdo_A 160 FIGDS-VSDEQTAQAANVDFGLAVWGMDPNADHQ------KVAHRFQKPLDILELFK 209 (209)
T ss_dssp EEESS-HHHHHHHHHHTCEEEEEGGGCCTTGGGS------CCSEEESSGGGGGGGC-
T ss_pred EECCC-hhhHHHHHHcCCeEEEEcCCCCChhhhc------cCCEEeCCHHHHHHhhC
Confidence 99999 9999999999999999999987555443 29999999999987763
No 82
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=99.52 E-value=3e-16 Score=131.93 Aligned_cols=84 Identities=15% Similarity=0.209 Sum_probs=69.2
Q ss_pred hhCCCCcccC--CCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCC----ccccCCCCCCCCC
Q 022007 215 STEKEPIVVG--KPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTT----QSTLQDPSNNIQP 288 (304)
Q Consensus 215 ~~~~~~~~~g--KP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~----~~~~~~~~~~~~p 288 (304)
+++.+....+ ||+|.+|+.+++++|++|+++++|||+ .+|+.||+++|+.++++.++... .+++.. ..|
T Consensus 131 ~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~-~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~----~~a 205 (229)
T 2fdr_A 131 IYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDS-VHGIHGARAAGMRVIGFTGASHTYPSHADRLTD----AGA 205 (229)
T ss_dssp EEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESS-HHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHH----HTC
T ss_pred EEeccccccCCCCcCHHHHHHHHHHcCCChhHeEEEcCC-HHHHHHHHHCCCEEEEEecCCccchhhhHHHhh----cCC
Confidence 3344445678 999999999999999999999999999 79999999999999999888653 112332 249
Q ss_pred cEEECCHHHHHHhhh
Q 022007 289 DYYTNQVSDILELLG 303 (304)
Q Consensus 289 d~v~~~l~el~~~l~ 303 (304)
+++++++.|+.++|.
T Consensus 206 d~v~~~~~el~~~l~ 220 (229)
T 2fdr_A 206 ETVISRMQDLPAVIA 220 (229)
T ss_dssp SEEESCGGGHHHHHH
T ss_pred ceeecCHHHHHHHHH
Confidence 999999999988774
No 83
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=99.52 E-value=3.8e-14 Score=115.75 Aligned_cols=61 Identities=11% Similarity=0.054 Sum_probs=50.9
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCH
Q 022007 225 KPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQV 295 (304)
Q Consensus 225 KP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l 295 (304)
||++..++.+++++|++|++++||||+ .+|+.+++++|+. +.++++.+ .+.. .+++++.+.
T Consensus 82 k~k~~~~~~~~~~~~~~~~~~~~vGD~-~~Di~~~~~ag~~---~~~~~~~~-~~~~-----~ad~v~~~~ 142 (180)
T 1k1e_A 82 LEKETACFDLMKQAGVTAEQTAYIGDD-SVDLPAFAACGTS---FAVADAPI-YVKN-----AVDHVLSTH 142 (180)
T ss_dssp SCHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSSEE---EECTTSCH-HHHT-----TSSEECSSC
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEECCC-HHHHHHHHHcCCe---EEeCCccH-HHHh-----hCCEEecCC
Confidence 889999999999999999999999999 7999999999954 44555543 3333 689999885
No 84
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=99.51 E-value=1.3e-13 Score=114.94 Aligned_cols=76 Identities=18% Similarity=0.214 Sum_probs=64.5
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhh
Q 022007 223 VGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELL 302 (304)
Q Consensus 223 ~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l 302 (304)
.+||++.+|+.+++++|++++++++|||+ .+|+.||+.+|+.+++|.+|....+++.. ..|+++++++.|+.++|
T Consensus 143 ~~k~~~~~~~~~~~~~~~~~~~~i~iGD~-~nDi~~~~~aG~~~~~~~~~~~~~~~l~~----~~ad~v~~~~~el~~~l 217 (225)
T 3d6j_A 143 HHKPDPEGLLLAIDRLKACPEEVLYIGDS-TVDAGTAAAAGVSFTGVTSGMTTAQEFQA----YPYDRIISTLGQLISVP 217 (225)
T ss_dssp SCTTSTHHHHHHHHHTTCCGGGEEEEESS-HHHHHHHHHHTCEEEEETTSSCCTTGGGG----SCCSEEESSGGGGC---
T ss_pred CCCCChHHHHHHHHHhCCChHHeEEEcCC-HHHHHHHHHCCCeEEEECCCCCChHHHhh----cCCCEEECCHHHHHHhh
Confidence 47899999999999999999999999999 89999999999999999998765555543 35999999999998877
Q ss_pred h
Q 022007 303 G 303 (304)
Q Consensus 303 ~ 303 (304)
.
T Consensus 218 ~ 218 (225)
T 3d6j_A 218 E 218 (225)
T ss_dssp -
T ss_pred h
Confidence 5
No 85
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=99.51 E-value=1.9e-15 Score=127.22 Aligned_cols=128 Identities=9% Similarity=0.057 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcE
Q 022007 167 YYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRM 245 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~ 245 (304)
++++.+.++.++++ |.+ +++||... ++...........++..+|+.+++.+....+||+|.+|+.+++++|++|+++
T Consensus 101 ~~~~~~~l~~l~~~-g~~~~i~t~~~~-~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 178 (235)
T 2om6_A 101 LEGTKEALQFVKER-GLKTAVIGNVMF-WPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEES 178 (235)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEEECCCS-SCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGE
T ss_pred CccHHHHHHHHHHC-CCEEEEEcCCcc-cchhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccce
Confidence 66788888888877 654 67888761 1100000000000112223334444556779999999999999999999999
Q ss_pred EEEcCCch-hhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 246 CMVGDRLD-TDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 246 ~~IGD~~~-~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
++|||+ . +|++||+++|+.++++.+|+. ..++.. .|+++++++.|+.++|.
T Consensus 179 ~~iGD~-~~nDi~~a~~aG~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~el~~~l~ 230 (235)
T 2om6_A 179 LHIGDT-YAEDYQGARKVGMWAVWINQEGD-KVRKLE-----ERGFEIPSIANLKDVIE 230 (235)
T ss_dssp EEEESC-TTTTHHHHHHTTSEEEEECTTCC-SCEEEE-----TTEEEESSGGGHHHHHH
T ss_pred EEECCC-hHHHHHHHHHCCCEEEEECCCCC-CcccCC-----CCcchHhhHHHHHHHHH
Confidence 999999 6 999999999999999999853 333332 58999999999998774
No 86
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=99.51 E-value=3e-15 Score=135.99 Aligned_cols=130 Identities=18% Similarity=0.181 Sum_probs=97.7
Q ss_pred CCCHHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHH--HhhCCCCcc-----------cCCCcHH
Q 022007 164 HINYYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMC--ASTEKEPIV-----------VGKPSTF 229 (304)
Q Consensus 164 ~~~~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~--~~~~~~~~~-----------~gKP~~~ 229 (304)
...++++.+.++.|+++ |.+ +++||....... ......++..+|+ .+++.+.+. .+||+|+
T Consensus 214 ~~l~pGv~elL~~Lk~~-Gi~laIvTn~~~~~~~----~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~ 288 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGA-GFELGIATGRPYTETV----VPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPF 288 (384)
T ss_dssp SSCHHHHHHHHHHHHHT-TCEEEEECSSCHHHHH----HHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTH
T ss_pred CCcCcCHHHHHHHHHhC-CCEEEEEeCCcHHHHH----HHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHH
Confidence 35699999999999987 665 788998652211 1111112334454 455544433 4999999
Q ss_pred HHHHHHHHcC--------------CCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCC---ccccCCCCCCCCCcEEE
Q 022007 230 MMEILSKKFQ--------------IASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTT---QSTLQDPSNNIQPDYYT 292 (304)
Q Consensus 230 ~~~~al~~lg--------------~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~---~~~~~~~~~~~~pd~v~ 292 (304)
+|..+++++| ++|++|+||||+ .+|+.+|+++||++++|.+|... .+++.. ..||+++
T Consensus 289 ~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs-~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~----~~ad~vi 363 (384)
T 1qyi_A 289 SYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDS-LADLLSAQKIGATFIGTLTGLKGKDAAGELEA----HHADYVI 363 (384)
T ss_dssp HHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESS-HHHHHHHHHHTCEEEEESCBTTBGGGHHHHHH----TTCSEEE
T ss_pred HHHHHHHHcCCccccccccccccCCCCcCeEEEcCC-HHHHHHHHHcCCEEEEECCCccccccHHHHhh----cCCCEEE
Confidence 9999999999 899999999999 79999999999999999998752 222321 3699999
Q ss_pred CCHHHHHHhhh
Q 022007 293 NQVSDILELLG 303 (304)
Q Consensus 293 ~~l~el~~~l~ 303 (304)
+++.|+.++|.
T Consensus 364 ~sl~eL~~~l~ 374 (384)
T 1qyi_A 364 NHLGELRGVLD 374 (384)
T ss_dssp SSGGGHHHHHS
T ss_pred CCHHHHHHHHH
Confidence 99999998875
No 87
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=99.50 E-value=4e-14 Score=124.10 Aligned_cols=229 Identities=14% Similarity=0.046 Sum_probs=131.1
Q ss_pred ccCEEEEeE--EEEcCCccCccHHHHHH--------HHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechH-
Q 022007 24 SVDAFLFDC--VIWKGDKLIDGVRQTLD--------VLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSS- 92 (304)
Q Consensus 24 ~~k~i~fDi--tL~~~~~~~~~a~eal~--------~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~- 92 (304)
.+|+|+||+ ||+++. +.+...+++. .+++.|+.++++|+ |+...+...++.+|++..++.++.+.
T Consensus 21 ~~kliifDlDGTLlds~-i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tG---r~~~~~~~~~~~~g~~~~~~~~i~~~g 96 (289)
T 3gyg_A 21 PQYIVFCDFDETYFPHT-IDEQKQQDIYELEDYLEQKSKDGELIIGWVTG---SSIESILDKMGRGKFRYFPHFIASDLG 96 (289)
T ss_dssp CSEEEEEETBTTTBCSS-CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECS---SCHHHHHHHHHHTTCCBCCSEEEETTT
T ss_pred CCeEEEEECCCCCcCCC-CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcC---CCHHHHHHHHHhhccCCCCCeEeecCC
Confidence 478999999 999977 6666777777 55778999999998 99999999999999864443322210
Q ss_pred ---------------HHHHHHHHhCCCCCCCeEEEEcChhHHHHHHHc-CCcccCCCCCcchhhhhccccccccCCCccE
Q 022007 93 ---------------FAAAMYLKVNNFPQENKVYVIGGEGILEELRQA-GYTGLGGPEDGEKRVQLKSNCLFEHDKNVGA 156 (304)
Q Consensus 93 ---------------~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (304)
......+... .. .-+...+.+.+++. |+.+....... ........
T Consensus 97 ~~i~~~~~ng~~~~~~~~~~~~~~~-~~------~~~v~e~l~~l~~~~g~~l~~~t~~~------------~~~~~~~~ 157 (289)
T 3gyg_A 97 TEITYFSEHNFGQQDNKWNSRINEG-FS------KEKVEKLVKQLHENHNILLNPQTQLG------------KSRYKHNF 157 (289)
T ss_dssp TEEEECCSSSTTEECHHHHHHHHTT-CC------HHHHHHHHHHHHHHSSCCCEEGGGTC------------GGGTTCCE
T ss_pred ceEEEEcCCCcEeecCchhhhhccc-CC------HHHHHHHHHHHHhhhCceeeeccccc------------ccceEEEE
Confidence 0000111111 10 00011223334433 54321100000 00001111
Q ss_pred EEEecCCCCCHHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHH
Q 022007 157 VVVGLDPHINYYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILS 235 (304)
Q Consensus 157 v~~~~~~~~~~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al 235 (304)
.+...+....++........++.. +.. .+..++.. .... +.....+....+||++..++.++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~~~-~~~~---------------~~~~~~~~~~~~~~k~~~~~~~~ 220 (289)
T 3gyg_A 158 YYQEQDEINDKKNLLAIEKICEEY-GVSVNINRCNPL-AGDP---------------EDSYDVDFIPIGTGKNEIVTFML 220 (289)
T ss_dssp EEECCCHHHHHHHHHHHHHHHHHH-TEEEEEEECCGG-GTCC---------------TTEEEEEEEESCCSHHHHHHHHH
T ss_pred EEeccccccchHHHHHHHHHHHHc-CCCEEEEEcccc-ccCC---------------CCceEEEEEeCCCCHHHHHHHHH
Confidence 111111111122344444444443 443 22232211 0000 00122344567899999999999
Q ss_pred HHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHH--HHHhh
Q 022007 236 KKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSD--ILELL 302 (304)
Q Consensus 236 ~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~e--l~~~l 302 (304)
+++|++++++++|||+ .+|+.|++.+| +.|.+|+..++ +.. .+++++.+..+ +.+.|
T Consensus 221 ~~~~~~~~~~~~~GDs-~~D~~~~~~ag---~~~~~~~~~~~-~~~-----~a~~v~~~~~~~gv~~~~ 279 (289)
T 3gyg_A 221 EKYNLNTERAIAFGDS-GNDVRMLQTVG---NGYLLKNATQE-AKN-----LHNLITDSEYSKGITNTL 279 (289)
T ss_dssp HHHTCCGGGEEEEECS-GGGHHHHTTSS---EEEECTTCCHH-HHH-----HCCCBCSSCHHHHHHHHH
T ss_pred HHcCCChhhEEEEcCC-HHHHHHHHhCC---cEEEECCccHH-HHH-----hCCEEcCCCCcCHHHHHH
Confidence 9999999999999999 99999999999 77888887644 433 57888888665 44443
No 88
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=99.49 E-value=2e-13 Score=113.92 Aligned_cols=74 Identities=8% Similarity=0.074 Sum_probs=64.8
Q ss_pred ccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHh
Q 022007 222 VVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILEL 301 (304)
Q Consensus 222 ~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~ 301 (304)
..+||++.+++.+++++|++++++++|||+ .+|++||+.+|+.+++|.+|....+.+.. .|+++++++.|+.+.
T Consensus 147 ~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~-~nDi~~a~~aG~~~~~~~~~~~~~~~~~~-----~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 147 PYSKPHPQVYLDCAAKLGVDPLTCVALEDS-VNGMIASKAARMRSIVVPAPEAQNDPRFV-----LANVKLSSLTELTAK 220 (226)
T ss_dssp SCCTTSTHHHHHHHHHHTSCGGGEEEEESS-HHHHHHHHHTTCEEEECCCTTTTTCGGGG-----GSSEECSCGGGCCHH
T ss_pred CCCCCChHHHHHHHHHcCCCHHHeEEEeCC-HHHHHHHHHcCCEEEEEcCCCCccccccc-----ccCeEECCHHHHhHH
Confidence 357999999999999999999999999999 79999999999999999998655444443 799999999998753
No 89
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=99.49 E-value=3.9e-14 Score=118.74 Aligned_cols=99 Identities=15% Similarity=0.135 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHh-hCCC--CcccCCCcHHHHHHHHHHcCCCC
Q 022007 167 YYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCAS-TEKE--PIVVGKPSTFMMEILSKKFQIAS 242 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~-~~~~--~~~~gKP~~~~~~~al~~lg~~~ 242 (304)
++++.+.++.|+++ |.+ +++||...... ...... +..+|+.+ .+.+ .....||+|++|..+++++|+
T Consensus 90 ~~~~~e~l~~L~~~-G~~l~ivTn~~~~~~----~~~l~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~-- 160 (211)
T 2b82_A 90 KEVARQLIDMHVRR-GDAIFFVTGRSPTKT----ETVSKT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI-- 160 (211)
T ss_dssp CHHHHHHHHHHHHH-TCEEEEEECSCCCSS----CCHHHH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE--
T ss_pred cHHHHHHHHHHHHC-CCEEEEEcCCcHHHH----HHHHHH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC--
Confidence 34566777777776 654 67899765221 111111 44455554 2333 245589999999999999998
Q ss_pred CcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCcc
Q 022007 243 SRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQS 277 (304)
Q Consensus 243 ~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~ 277 (304)
++||||+ .+|+++|+++||++++|.+|.....
T Consensus 161 --~l~VGDs-~~Di~aA~~aG~~~i~v~~g~~~~~ 192 (211)
T 2b82_A 161 --RIFYGDS-DNDITAARDVGARGIRILRASNSTY 192 (211)
T ss_dssp --EEEEESS-HHHHHHHHHTTCEEEECCCCTTCSS
T ss_pred --EEEEECC-HHHHHHHHHCCCeEEEEecCCCCcc
Confidence 9999999 7999999999999999999986543
No 90
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=99.49 E-value=1.2e-13 Score=113.66 Aligned_cols=62 Identities=21% Similarity=0.202 Sum_probs=51.1
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCH
Q 022007 224 GKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQV 295 (304)
Q Consensus 224 gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l 295 (304)
+||+|.+++.+++++|+++++++||||+ .+|+.+|+++|+.+ .++++.. .+.. .+++++++.
T Consensus 99 ~kpk~~~~~~~~~~~g~~~~~~~~iGD~-~~Di~~a~~ag~~~---~~~~~~~-~~~~-----~ad~v~~~~ 160 (188)
T 2r8e_A 99 QSNKLIAFSDLLEKLAIAPENVAYVGDD-LIDWPVMEKVGLSV---AVADAHP-LLIP-----RADYVTRIA 160 (188)
T ss_dssp CSCSHHHHHHHHHHHTCCGGGEEEEESS-GGGHHHHTTSSEEE---ECTTSCT-TTGG-----GSSEECSSC
T ss_pred CCCCHHHHHHHHHHcCCCHHHEEEECCC-HHHHHHHHHCCCEE---EecCcCH-HHHh-----cCCEEEeCC
Confidence 5899999999999999999999999999 79999999999655 3444432 2332 589999986
No 91
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=99.48 E-value=4.5e-14 Score=116.85 Aligned_cols=68 Identities=19% Similarity=0.225 Sum_probs=56.8
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECC------HHHH
Q 022007 225 KPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQ------VSDI 298 (304)
Q Consensus 225 KP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~------l~el 298 (304)
||++.+++.+++++|+++++++||||+ .+|+.+++++| +.+.+++..+. +.. .+++++.+ +.++
T Consensus 99 k~k~~~~~~~~~~~~~~~~~~~~vGD~-~nDi~~~~~ag---~~va~~na~~~-~~~-----~ad~v~~~~~~~G~~~~~ 168 (195)
T 3n07_A 99 DDKVQAYYDICQKLAIAPEQTGYIGDD-LIDWPVMEKVA---LRVCVADGHPL-LAQ-----RANYVTHIKGGHGAVREV 168 (195)
T ss_dssp SSHHHHHHHHHHHHCCCGGGEEEEESS-GGGHHHHTTSS---EEEECTTSCHH-HHH-----HCSEECSSCTTTTHHHHH
T ss_pred CCcHHHHHHHHHHhCCCHHHEEEEcCC-HHHHHHHHHCC---CEEEECChHHH-HHH-----hCCEEEcCCCCCCHHHHH
Confidence 888999999999999999999999999 89999999999 67778876543 332 68999887 4566
Q ss_pred HHhh
Q 022007 299 LELL 302 (304)
Q Consensus 299 ~~~l 302 (304)
.++|
T Consensus 169 ~~~i 172 (195)
T 3n07_A 169 CDLI 172 (195)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 92
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=99.46 E-value=5.5e-13 Score=116.58 Aligned_cols=72 Identities=14% Similarity=0.199 Sum_probs=58.2
Q ss_pred cccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHH--H
Q 022007 221 IVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSD--I 298 (304)
Q Consensus 221 ~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~e--l 298 (304)
...+-+++.+++.+++++|++++++++|||+ .+|+.|++.+| +.|++|++.+ +++. .+++++++..+ +
T Consensus 193 ~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~-~nD~~m~~~ag---~~va~~n~~~-~~~~-----~a~~v~~~~~~dGV 262 (282)
T 1rkq_A 193 LDKRVNKGTGVKSLADVLGIKPEEIMAIGDQ-ENDIAMIEYAG---VGVAVDNAIP-SVKE-----VANFVTKSNLEDGV 262 (282)
T ss_dssp EETTCSHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSS---EEEECTTSCH-HHHH-----HCSEECCCTTTTHH
T ss_pred cCCCCCCHHHHHHHHHHhCCCHHHEEEECCc-HHHHHHHHHCC---cEEEecCCcH-HHHh-----hCCEEecCCCcchH
Confidence 4456677999999999999999999999999 99999999999 6788888764 3443 58999988554 4
Q ss_pred HHhh
Q 022007 299 LELL 302 (304)
Q Consensus 299 ~~~l 302 (304)
.++|
T Consensus 263 ~~~l 266 (282)
T 1rkq_A 263 AFAI 266 (282)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 93
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=99.45 E-value=3.9e-12 Score=111.44 Aligned_cols=67 Identities=19% Similarity=0.156 Sum_probs=55.0
Q ss_pred cccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHH
Q 022007 221 IVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSD 297 (304)
Q Consensus 221 ~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~e 297 (304)
...+-++..+++.+++++|++++++++|||+ .+|+.|++.+| +.|.+|++.+ +++. .+++++.+..+
T Consensus 211 ~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~-~nD~~m~~~ag---~~va~~~~~~-~~~~-----~a~~v~~~~~~ 277 (288)
T 1nrw_A 211 SSRKASKGQALKRLAKQLNIPLEETAAVGDS-LNDKSMLEAAG---KGVAMGNARE-DIKS-----IADAVTLTNDE 277 (288)
T ss_dssp EETTCSHHHHHHHHHHHTTCCGGGEEEEESS-GGGHHHHHHSS---EEEECTTCCH-HHHH-----HCSEECCCGGG
T ss_pred ecCCCChHHHHHHHHHHhCCCHHHEEEEcCC-HHHHHHHHHcC---cEEEEcCCCH-HHHh-----hCceeecCCCc
Confidence 3445567899999999999999999999999 99999999999 5667777654 4443 58999988754
No 94
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=99.45 E-value=1.8e-13 Score=112.63 Aligned_cols=68 Identities=15% Similarity=0.243 Sum_probs=56.5
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECC------HHHH
Q 022007 225 KPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQ------VSDI 298 (304)
Q Consensus 225 KP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~------l~el 298 (304)
+|+|++++.+++++|+++++++||||+ .+|+.+++++| +.+.+|+..+. ... .+++++.+ +.++
T Consensus 93 ~~K~~~~~~~~~~~g~~~~~~~~vGD~-~nDi~~~~~ag---~~~~~~~~~~~-~~~-----~ad~v~~~~~~~G~~~~l 162 (189)
T 3mn1_A 93 EDKLVVLDKLLAELQLGYEQVAYLGDD-LPDLPVIRRVG---LGMAVANAASF-VRE-----HAHGITRAQGGEGAAREF 162 (189)
T ss_dssp SCHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSS---EEEECTTSCHH-HHH-----TSSEECSSCTTTTHHHHH
T ss_pred CChHHHHHHHHHHcCCChhHEEEECCC-HHHHHHHHHCC---CeEEeCCccHH-HHH-----hCCEEecCCCCCcHHHHH
Confidence 556799999999999999999999999 89999999999 66777776543 332 68999988 6777
Q ss_pred HHhh
Q 022007 299 LELL 302 (304)
Q Consensus 299 ~~~l 302 (304)
.++|
T Consensus 163 ~~~l 166 (189)
T 3mn1_A 163 CELI 166 (189)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 95
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=99.44 E-value=1.7e-13 Score=111.53 Aligned_cols=69 Identities=14% Similarity=0.150 Sum_probs=59.4
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECC------HHHH
Q 022007 225 KPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQ------VSDI 298 (304)
Q Consensus 225 KP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~------l~el 298 (304)
||++..++.+++++|+++++++||||+ .+|+.+++++| +.|.+++..+. +.. .+++++.+ +.++
T Consensus 85 ~~k~~~l~~~~~~~~~~~~~~~~vGD~-~nD~~~~~~ag---~~v~~~~~~~~-~~~-----~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 85 DRKDLALKQWCEEQGIAPERVLYVGND-VNDLPCFALVG---WPVAVASAHDV-VRG-----AARAVTTVPGGDGAIREI 154 (176)
T ss_dssp SCHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSS---EEEECTTCCHH-HHH-----HSSEECSSCTTTTHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEEcCC-HHHHHHHHHCC---CeEECCChhHH-HHH-----hCCEEecCCCCCcHHHHH
Confidence 889999999999999999999999999 89999999999 77777776543 332 58999999 8888
Q ss_pred HHhhh
Q 022007 299 LELLG 303 (304)
Q Consensus 299 ~~~l~ 303 (304)
.++|.
T Consensus 155 ~~~l~ 159 (176)
T 3mmz_A 155 ASWIL 159 (176)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 96
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=99.44 E-value=4.8e-15 Score=124.60 Aligned_cols=119 Identities=13% Similarity=0.032 Sum_probs=79.2
Q ss_pred CHHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCc
Q 022007 166 NYYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSR 244 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~ 244 (304)
.++++.+.++.|+++ |.+ +++||.+. .. .......++..+|+.+++.+....+||+|++|+.+++++|++|
T Consensus 96 ~~~~~~~~l~~l~~~-g~~~~i~Tn~~~-~~----~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~-- 167 (220)
T 2zg6_A 96 LYDDTLEFLEGLKSN-GYKLALVSNASP-RV----KTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPA-- 167 (220)
T ss_dssp ECTTHHHHHHHHHTT-TCEEEECCSCHH-HH----HHHHHHHTCGGGCSEEC-----------CCHHHHHHHHHCSSE--
T ss_pred ECcCHHHHHHHHHHC-CCEEEEEeCCcH-HH----HHHHHhcCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCCe--
Confidence 367888999999887 665 67788654 11 1112222234456667777888889999999999999999988
Q ss_pred EEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 245 MCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 245 ~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
+||||++.+|+.+|+++||++++|.++... .+ . +++++++.|+.++|.
T Consensus 168 -~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~-~~-------~--~~~i~~l~el~~~l~ 215 (220)
T 2zg6_A 168 -VHVGDIYELDYIGAKRSYVDPILLDRYDFY-PD-------V--RDRVKNLREALQKIE 215 (220)
T ss_dssp -EEEESSCCCCCCCSSSCSEEEEEBCTTSCC-TT-------C--CSCBSSHHHHHHHHH
T ss_pred -EEEcCCchHhHHHHHHCCCeEEEECCCCCC-CC-------c--ceEECCHHHHHHHHH
Confidence 999999434999999999999999876221 11 1 568999999988774
No 97
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=99.43 E-value=6.5e-12 Score=108.85 Aligned_cols=73 Identities=16% Similarity=0.269 Sum_probs=59.1
Q ss_pred cccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHH--H
Q 022007 221 IVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSD--I 298 (304)
Q Consensus 221 ~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~e--l 298 (304)
...+.+++.+++.+++++|++++++++|||+ .+|+.|++.+| +.|.+|++.+ +++. .+++++.+..+ +
T Consensus 185 ~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~-~nD~~~~~~ag---~~v~~~n~~~-~~~~-----~a~~v~~~~~~dGv 254 (268)
T 1nf2_A 185 VPKNVDKGKALRFLRERMNWKKEEIVVFGDN-ENDLFMFEEAG---LRVAMENAIE-KVKE-----ASDIVTLTNNDSGV 254 (268)
T ss_dssp ECTTCCHHHHHHHHHHHHTCCGGGEEEEECS-HHHHHHHTTCS---EEEECTTSCH-HHHH-----HCSEECCCTTTTHH
T ss_pred eCCCCChHHHHHHHHHHcCCCHHHeEEEcCc-hhhHHHHHHcC---CEEEecCCCH-HHHh-----hCCEEEccCCcchH
Confidence 3456678999999999999999999999999 99999999999 6888998754 3443 58999988543 5
Q ss_pred HHhhh
Q 022007 299 LELLG 303 (304)
Q Consensus 299 ~~~l~ 303 (304)
.++|+
T Consensus 255 ~~~i~ 259 (268)
T 1nf2_A 255 SYVLE 259 (268)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 55543
No 98
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=99.42 E-value=3e-13 Score=124.77 Aligned_cols=50 Identities=26% Similarity=0.236 Sum_probs=44.9
Q ss_pred cccCCCcHHHHHHHHHHcC----CCCCcEEEEcCCc----------------hhhHHHHHHcCCeEEEEc
Q 022007 221 IVVGKPSTFMMEILSKKFQ----IASSRMCMVGDRL----------------DTDILFGQNAGCKTLLVL 270 (304)
Q Consensus 221 ~~~gKP~~~~~~~al~~lg----~~~~~~~~IGD~~----------------~~Di~~a~~aG~~ti~V~ 270 (304)
+..+||+|.+|+.+++++| ++|++|+||||++ .+|+.+|+++|++++..-
T Consensus 149 ~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~pe 218 (416)
T 3zvl_A 149 GLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATPE 218 (416)
T ss_dssp STTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECHH
T ss_pred CCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCcH
Confidence 4568999999999999997 9999999999995 389999999999987653
No 99
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=99.42 E-value=9e-13 Score=114.56 Aligned_cols=72 Identities=19% Similarity=0.224 Sum_probs=62.8
Q ss_pred ccCCCcHHHHHHHHHHcCC-------CCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECC
Q 022007 222 VVGKPSTFMMEILSKKFQI-------ASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQ 294 (304)
Q Consensus 222 ~~gKP~~~~~~~al~~lg~-------~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~ 294 (304)
..+||+|++|+.+++++|+ +|++|++|||+ .+|++||+++|+.+++|.+|+.. +++.. ..|++++++
T Consensus 167 ~~~kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs-~nDi~~a~~AG~~~i~v~~~~~~-~~~~~----~~ad~v~~~ 240 (275)
T 2qlt_A 167 KQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDA-PAGIAAGKAAGCKIVGIATTFDL-DFLKE----KGCDIIVKN 240 (275)
T ss_dssp SSCTTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESS-HHHHHHHHHTTCEEEEESSSSCH-HHHTT----SSCSEEESS
T ss_pred CCCCCChHHHHHHHHHcCCCccccCCCcceEEEEeCC-HHHHHHHHHcCCEEEEECCCCCH-HHHhh----CCCCEEECC
Confidence 4589999999999999999 99999999999 79999999999999999999764 33332 369999999
Q ss_pred HHHHH
Q 022007 295 VSDIL 299 (304)
Q Consensus 295 l~el~ 299 (304)
+.|+.
T Consensus 241 ~~el~ 245 (275)
T 2qlt_A 241 HESIR 245 (275)
T ss_dssp GGGEE
T ss_pred hHHcC
Confidence 98863
No 100
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=99.42 E-value=4.2e-13 Score=113.71 Aligned_cols=66 Identities=14% Similarity=0.252 Sum_probs=55.6
Q ss_pred cccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHH
Q 022007 221 IVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVS 296 (304)
Q Consensus 221 ~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~ 296 (304)
...+.+++..++.+++++|++++++++|||+ .+|+.|++.+| +.|.+|++.+ +++. .+++++.+..
T Consensus 148 ~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~-~nD~~m~~~ag---~~va~~n~~~-~~k~-----~a~~v~~~~~ 213 (227)
T 1l6r_A 148 MNRGEDKAFAVNKLKEMYSLEYDEILVIGDS-NNDMPMFQLPV---RKACPANATD-NIKA-----VSDFVSDYSY 213 (227)
T ss_dssp EETTCSHHHHHHHHHHHTTCCGGGEEEECCS-GGGHHHHTSSS---EEEECTTSCH-HHHH-----HCSEECSCCT
T ss_pred ecCCCCHHHHHHHHHHHhCcCHHHEEEECCc-HHhHHHHHHcC---ceEEecCchH-HHHH-----hCCEEecCCC
Confidence 4556778999999999999999999999999 99999999999 6778888764 3443 5899988764
No 101
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=99.39 E-value=6.3e-14 Score=115.10 Aligned_cols=119 Identities=20% Similarity=0.215 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcE
Q 022007 167 YYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRM 245 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~ 245 (304)
++++.+.++.++++ |.. +++||....... .....++..+|+.+++.+....+||++.+++.+++++|++|+++
T Consensus 87 ~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~-----~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~ 160 (207)
T 2go7_A 87 MPGAREVLAWADES-GIQQFIYTHKGNNAFT-----ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNT 160 (207)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEECSSCTHHHH-----HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred CcCHHHHHHHHHHC-CCeEEEEeCCchHHHH-----HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccE
Confidence 56778888888877 654 677886552110 00000112233444555666788999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhhC
Q 022007 246 CMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLGQ 304 (304)
Q Consensus 246 ~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~~ 304 (304)
++|||+ .+|++||+++|+.++++.+|. . .|+++++++.|+.++|.+
T Consensus 161 ~~iGD~-~nDi~~~~~aG~~~i~~~~~~-~-----------~a~~v~~~~~el~~~l~~ 206 (207)
T 2go7_A 161 YYIGDR-TLDVEFAQNSGIQSINFLEST-Y-----------EGNHRIQALADISRIFET 206 (207)
T ss_dssp EEEESS-HHHHHHHHHHTCEEEESSCCS-C-----------TTEEECSSTTHHHHHTSC
T ss_pred EEECCC-HHHHHHHHHCCCeEEEEecCC-C-----------CCCEEeCCHHHHHHHHhc
Confidence 999999 999999999999999988775 2 389999999999998753
No 102
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=99.38 E-value=3e-12 Score=103.24 Aligned_cols=68 Identities=12% Similarity=0.156 Sum_probs=55.4
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECC------HHHH
Q 022007 225 KPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQ------VSDI 298 (304)
Q Consensus 225 KP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~------l~el 298 (304)
+|++.+++.+++++|++|++++||||+ .+|+.|++.+| +.+.+++..+ .+.. .+++++.+ +.++
T Consensus 82 ~~K~~~l~~~~~~~gi~~~~~~~vGD~-~nDi~~~~~ag---~~~a~~na~~-~~k~-----~Ad~v~~~~~~~G~~~~~ 151 (168)
T 3ewi_A 82 SDKLATVDEWRKEMGLCWKEVAYLGNE-VSDEECLKRVG---LSAVPADACS-GAQK-----AVGYICKCSGGRGAIREF 151 (168)
T ss_dssp SCHHHHHHHHHHHTTCCGGGEEEECCS-GGGHHHHHHSS---EEEECTTCCH-HHHT-----TCSEECSSCTTTTHHHHH
T ss_pred CChHHHHHHHHHHcCcChHHEEEEeCC-HhHHHHHHHCC---CEEEeCChhH-HHHH-----hCCEEeCCCCCccHHHHH
Confidence 466899999999999999999999999 89999999999 6677787764 3443 68999886 4455
Q ss_pred HHhh
Q 022007 299 LELL 302 (304)
Q Consensus 299 ~~~l 302 (304)
.++|
T Consensus 152 ~~~i 155 (168)
T 3ewi_A 152 AEHI 155 (168)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 103
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=99.38 E-value=1.3e-12 Score=108.69 Aligned_cols=69 Identities=19% Similarity=0.271 Sum_probs=55.1
Q ss_pred ccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECC--HHHHH
Q 022007 222 VVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQ--VSDIL 299 (304)
Q Consensus 222 ~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~--l~el~ 299 (304)
..+||+|.+|+.+++++|++|+++++|||+ .+|+.||+++|+.+++ +. .+.+.. .||+++++ +.++.
T Consensus 138 ~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs-~~Di~~a~~aG~~~~~----~~-~~~l~~-----~ad~v~~~~dl~~~~ 206 (217)
T 3m1y_A 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDG-ANDLSMFKHAHIKIAF----NA-KEVLKQ-----HATHCINEPDLALIK 206 (217)
T ss_dssp CSTTHHHHHHHHHHHHHTCCSTTEEEEECS-GGGHHHHTTCSEEEEE----SC-CHHHHT-----TCSEEECSSBGGGGT
T ss_pred CCCCChHHHHHHHHHHcCCCHhHEEEEeCC-HHHHHHHHHCCCeEEE----Cc-cHHHHH-----hcceeecccCHHHHH
Confidence 358999999999999999999999999999 7999999999976543 33 344554 69999864 44544
Q ss_pred Hh
Q 022007 300 EL 301 (304)
Q Consensus 300 ~~ 301 (304)
.+
T Consensus 207 ~~ 208 (217)
T 3m1y_A 207 PL 208 (217)
T ss_dssp TC
T ss_pred HH
Confidence 33
No 104
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=99.37 E-value=1.1e-11 Score=109.41 Aligned_cols=66 Identities=17% Similarity=0.212 Sum_probs=55.3
Q ss_pred cccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEEC-CHH
Q 022007 221 IVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTN-QVS 296 (304)
Q Consensus 221 ~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~-~l~ 296 (304)
...+-+++.+++.+++.+|++++++++|||+ .+|+.|++.+| +.|++|++.+ ++.. .+++++. +..
T Consensus 219 ~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~-~nD~~m~~~ag---~~va~~na~~-~~k~-----~a~~v~~~~~~ 285 (301)
T 2b30_A 219 TKLGHDKYTGINYLLKHYNISNDQVLVVGDA-ENDIAMLSNFK---YSFAVANATD-SAKS-----HAKCVLPVSHR 285 (301)
T ss_dssp EETTCCHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHHSCS---EEEECTTCCH-HHHH-----HSSEECSSCTT
T ss_pred cCCCCCcHHHHHHHHHHcCCCHHHEEEECCC-HHHHHHHHHcC---CeEEEcCCcH-HHHh-----hCCEEEccCCC
Confidence 4456677999999999999999999999999 99999999999 6788888764 3443 5899988 754
No 105
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=99.37 E-value=2.8e-14 Score=118.60 Aligned_cols=75 Identities=13% Similarity=0.052 Sum_probs=58.9
Q ss_pred ccCCCcHHHHHHHH-HHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHH
Q 022007 222 VVGKPSTFMMEILS-KKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILE 300 (304)
Q Consensus 222 ~~gKP~~~~~~~al-~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~ 300 (304)
...||++..+..++ +.+|+++++++||||+ .+|++|+ ++|+.+++|.+|.+...+... ..|+++++++.|+.+
T Consensus 143 ~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~-~~Di~~~-~~G~~~~~v~~~~~~~~~~~~----~~ad~v~~~~~el~~ 216 (219)
T 3kd3_A 143 DNSNGACDSKLSAFDKAKGLIDGEVIAIGDG-YTDYQLY-EKGYATKFIAYMEHIEREKVI----NLSKYVARNVAELAS 216 (219)
T ss_dssp ECTTSTTTCHHHHHHHHGGGCCSEEEEEESS-HHHHHHH-HHTSCSEEEEECSSCCCHHHH----HHCSEEESSHHHHHH
T ss_pred CCCCCCcccHHHHHHHHhCCCCCCEEEEECC-HhHHHHH-hCCCCcEEEeccCccccHHHH----hhcceeeCCHHHHHH
Confidence 45788776555544 5569999999999999 8999999 589999999887655333222 269999999999998
Q ss_pred hh
Q 022007 301 LL 302 (304)
Q Consensus 301 ~l 302 (304)
+|
T Consensus 217 ~l 218 (219)
T 3kd3_A 217 LI 218 (219)
T ss_dssp HH
T ss_pred hh
Confidence 76
No 106
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=99.36 E-value=1.4e-12 Score=111.94 Aligned_cols=65 Identities=12% Similarity=0.052 Sum_probs=55.3
Q ss_pred CCCcHHHHHHHHHHcCC-CCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHH
Q 022007 224 GKPSTFMMEILSKKFQI-ASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSD 297 (304)
Q Consensus 224 gKP~~~~~~~al~~lg~-~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~e 297 (304)
+-.+..+++.+++++|+ +++++++|||+ .||++|.+.+| +.|++|++..++++. .+++++++..+
T Consensus 177 g~sKg~al~~l~~~~~~~~~~~viafGD~-~NDi~Ml~~ag---~~va~gna~~~~~~~-----~a~~v~~~~~~ 242 (249)
T 2zos_A 177 NSDKGKAAKILLDFYKRLGQIESYAVGDS-YNDFPMFEVVD---KVFIVGSLKHKKAQN-----VSSIIDVLEVI 242 (249)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECS-GGGHHHHTTSS---EEEEESSCCCTTEEE-----ESSHHHHHHHH
T ss_pred CCChHHHHHHHHHHhccCCCceEEEECCC-cccHHHHHhCC---cEEEeCCCCccccch-----hceEEeccccc
Confidence 55668999999999998 99999999999 99999999999 789999987555554 57887777654
No 107
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=99.35 E-value=2.1e-12 Score=108.11 Aligned_cols=68 Identities=18% Similarity=0.198 Sum_probs=55.8
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCH------HHH
Q 022007 225 KPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQV------SDI 298 (304)
Q Consensus 225 KP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l------~el 298 (304)
||+|++++.+++++|+++++++||||+ .+|+.+++++| +.+..+++.+. ... .+++++.+. .|+
T Consensus 123 k~K~~~l~~~~~~lg~~~~~~~~vGDs-~nDi~~~~~ag---~~~a~~~~~~~-~~~-----~Ad~v~~~~~~~G~v~e~ 192 (211)
T 3ij5_A 123 SDKLVAYHELLATLQCQPEQVAYIGDD-LIDWPVMAQVG---LSVAVADAHPL-LLP-----KAHYVTRIKGGRGAVREV 192 (211)
T ss_dssp SSHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHTTSS---EEEECTTSCTT-TGG-----GSSEECSSCTTTTHHHHH
T ss_pred CChHHHHHHHHHHcCcCcceEEEEcCC-HHHHHHHHHCC---CEEEeCCccHH-HHh-----hCCEEEeCCCCCcHHHHH
Confidence 788999999999999999999999999 89999999999 66666665433 332 689998875 666
Q ss_pred HHhh
Q 022007 299 LELL 302 (304)
Q Consensus 299 ~~~l 302 (304)
.++|
T Consensus 193 ~~~l 196 (211)
T 3ij5_A 193 CDLI 196 (211)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 108
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=99.35 E-value=8.3e-12 Score=107.55 Aligned_cols=61 Identities=13% Similarity=-0.026 Sum_probs=53.1
Q ss_pred cccCCCcHHHHHHHHHHcCCCC--CcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCH
Q 022007 221 IVVGKPSTFMMEILSKKFQIAS--SRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQV 295 (304)
Q Consensus 221 ~~~gKP~~~~~~~al~~lg~~~--~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l 295 (304)
... ++++.+++.+++++|+++ +++++|||+ .||+.|++.+| +.|++|++.+ + .++|++.+.
T Consensus 172 ~~~-~~K~~~l~~l~~~~~i~~~~~~~~~~GD~-~nD~~m~~~ag---~~va~~na~~--~-------~~~~~~~~~ 234 (259)
T 3zx4_A 172 AKG-ADKGRAVARLRALWPDPEEARFAVGLGDS-LNDLPLFRAVD---LAVYVGRGDP--P-------EGVLATPAP 234 (259)
T ss_dssp ESS-CCHHHHHHHHHHTCSSHHHHTSEEEEESS-GGGHHHHHTSS---EEEECSSSCC--C-------TTCEECSSC
T ss_pred cCC-CCHHHHHHHHHHHhCCCCCCceEEEEeCC-HHHHHHHHhCC---CeEEeCChhh--c-------CCcEEeCCC
Confidence 344 788999999999999999 999999999 99999999999 8899999875 3 357887764
No 109
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=99.35 E-value=3.5e-12 Score=107.13 Aligned_cols=70 Identities=19% Similarity=0.300 Sum_probs=53.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 224 GKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 224 gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
.||+|++|+.+++++|+ ++++||||+ .+|+.+|+++|+ ++++..+... +... ..|+++++++.|+.++|.
T Consensus 155 ~~~Kp~~~~~~~~~~~~--~~~~~vGDs-~~Di~~a~~ag~-~i~~~~~~~~-~~~~-----~~~~~~~~~~~el~~~l~ 224 (225)
T 1nnl_A 155 SGGKGKVIKLLKEKFHF--KKIIMIGDG-ATDMEACPPADA-FIGFGGNVIR-QQVK-----DNAKWYITDFVELLGELE 224 (225)
T ss_dssp TTHHHHHHHHHHHHHCC--SCEEEEESS-HHHHTTTTTSSE-EEEECSSCCC-HHHH-----HHCSEEESCGGGGCC---
T ss_pred CCchHHHHHHHHHHcCC--CcEEEEeCc-HHhHHHHHhCCe-EEEecCcccc-HHHH-----hcCCeeecCHHHHHHHHh
Confidence 46888999999999998 799999999 799999999998 7766432211 1122 268999999999987764
No 110
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=99.31 E-value=2e-12 Score=106.75 Aligned_cols=104 Identities=13% Similarity=0.031 Sum_probs=82.6
Q ss_pred CHHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCc
Q 022007 166 NYYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSR 244 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~ 244 (304)
.++++.+.++.++++ |.+ +++||.+...... ......++..+|+.+++.+....+||+|++|+.+++++|+++++
T Consensus 92 ~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~---~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 167 (206)
T 2b0c_A 92 LRPEVIAIMHKLREQ-GHRVVVLSNTNRLHTTF---WPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSD 167 (206)
T ss_dssp ECHHHHHHHHHHHHT-TCEEEEEECCCCCTTSC---CGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred cCccHHHHHHHHHHC-CCeEEEEECCChHHHHH---HHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHH
Confidence 368899999999877 665 7789976633211 11111346667777777777788999999999999999999999
Q ss_pred EEEEcCCchhhHHHHHHcCCeEEEEccCCC
Q 022007 245 MCMVGDRLDTDILFGQNAGCKTLLVLSGVT 274 (304)
Q Consensus 245 ~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~ 274 (304)
+++|||+ .+|+.+|+++|+.++++.+|..
T Consensus 168 ~~~vgD~-~~Di~~a~~aG~~~~~~~~~~~ 196 (206)
T 2b0c_A 168 TVFFDDN-ADNIEGANQLGITSILVKDKTT 196 (206)
T ss_dssp EEEEESC-HHHHHHHHTTTCEEEECCSTTH
T ss_pred eEEeCCC-HHHHHHHHHcCCeEEEecCCch
Confidence 9999999 8999999999999999988754
No 111
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=99.30 E-value=2.1e-12 Score=114.85 Aligned_cols=71 Identities=14% Similarity=0.166 Sum_probs=54.5
Q ss_pred ccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEE--ECCHHHHH
Q 022007 222 VVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYY--TNQVSDIL 299 (304)
Q Consensus 222 ~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v--~~~l~el~ 299 (304)
..+||+|++|+.+++++|++|++++||||+ .+|+.+|+++|+..+ ++ .. +.+.. .++++ .+++.++.
T Consensus 242 ~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs-~~Di~aa~~AG~~va---~~-~~-~~~~~-----~a~~~i~~~~L~~ll 310 (317)
T 4eze_A 242 MNAANKKQTLVDLAARLNIATENIIACGDG-ANDLPMLEHAGTGIA---WK-AK-PVVRE-----KIHHQINYHGFELLL 310 (317)
T ss_dssp CCHHHHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSSEEEE---ES-CC-HHHHH-----HCCEEESSSCGGGGG
T ss_pred CCCCCCHHHHHHHHHHcCCCcceEEEEeCC-HHHHHHHHHCCCeEE---eC-CC-HHHHH-----hcCeeeCCCCHHHHH
Confidence 347899999999999999999999999999 899999999996444 43 22 22222 34554 45888888
Q ss_pred Hhhh
Q 022007 300 ELLG 303 (304)
Q Consensus 300 ~~l~ 303 (304)
++|+
T Consensus 311 ~~L~ 314 (317)
T 4eze_A 311 FLIE 314 (317)
T ss_dssp GGTC
T ss_pred HHHH
Confidence 7765
No 112
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=99.28 E-value=1.3e-11 Score=107.39 Aligned_cols=56 Identities=13% Similarity=0.102 Sum_probs=50.2
Q ss_pred ccCEEEEeE--EEEcC-CccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDC--VIWKG-DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDi--tL~~~-~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.+++|+||+ ||++. ..+.+.+.++|++|+++|++++++|| |+...+...++.+|++
T Consensus 8 ~~~li~~DlDGTLl~~~~~~~~~~~~~l~~l~~~G~~~~iaTG---R~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLDSHSYDWQPAAPWLTRLREANVPVILCSS---KTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp CCEEEEEECTTTTSCSSCCSCCTTHHHHHHHHHTTCCEEEECS---SCHHHHHHHHHHTTCT
T ss_pred CceEEEEeCCCCCCCCCCcCCHHHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCC
Confidence 579999999 99985 45678899999999999999999999 9999999999999885
No 113
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=99.26 E-value=4e-13 Score=110.63 Aligned_cols=107 Identities=11% Similarity=0.007 Sum_probs=79.2
Q ss_pred CHHHHHHHHHHHHcCCCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcE
Q 022007 166 NYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRM 245 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~ 245 (304)
.++++.+.++.++++ +..+++||.+..... ......++..+|+.+++.+....+||+|++|+.+++++|++|+++
T Consensus 87 ~~~~~~~~l~~l~~~-g~~~i~s~~~~~~~~----~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 161 (200)
T 3cnh_A 87 PRPEVLALARDLGQR-YRMYSLNNEGRDLNE----YRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEA 161 (200)
T ss_dssp BCHHHHHHHHHHTTT-SEEEEEECCCHHHHH----HHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred cCccHHHHHHHHHHc-CCEEEEeCCcHHHHH----HHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 478899999999887 555778987652210 011111122233444444556789999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCeEEEEccCCCCccc
Q 022007 246 CMVGDRLDTDILFGQNAGCKTLLVLSGVTTQST 278 (304)
Q Consensus 246 ~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~ 278 (304)
+||||+ .+|+.+|+++|+.+++|.+|....+.
T Consensus 162 ~~vgD~-~~Di~~a~~aG~~~~~~~~~~~~~~~ 193 (200)
T 3cnh_A 162 VMVDDR-LQNVQAARAVGMHAVQCVDAAQLREE 193 (200)
T ss_dssp EEEESC-HHHHHHHHHTTCEEEECSCHHHHHHH
T ss_pred EEeCCC-HHHHHHHHHCCCEEEEECCchhhHHH
Confidence 999999 79999999999999999888654433
No 114
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=99.25 E-value=2.3e-11 Score=104.60 Aligned_cols=67 Identities=15% Similarity=0.113 Sum_probs=57.3
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEcc-CCCCccccCCCCCCCCCcEEECCHHHH
Q 022007 224 GKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLS-GVTTQSTLQDPSNNIQPDYYTNQVSDI 298 (304)
Q Consensus 224 gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~-G~~~~~~~~~~~~~~~pd~v~~~l~el 298 (304)
+||+|++|+.+++++|++|++|+||||+ .+|+++|+++||++++|.+ |+.. ... ..|+++++++.||
T Consensus 186 ~KP~p~~~~~a~~~lg~~p~~~l~vgDs-~~di~aA~~aG~~~i~v~~~~~~~---~~~----~~~~~~i~~l~eL 253 (253)
T 2g80_A 186 KKTETQSYANILRDIGAKASEVLFLSDN-PLELDAAAGVGIATGLASRPGNAP---VPD----GQKYQVYKNFETL 253 (253)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESC-HHHHHHHHTTTCEEEEECCTTSCC---CCS----SCCSCEESCSTTC
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEEcCC-HHHHHHHHHcCCEEEEEcCCCCCC---ccc----ccCCCccCChhhC
Confidence 6999999999999999999999999999 7999999999999999987 4421 111 1488999998774
No 115
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=99.22 E-value=1.8e-12 Score=109.59 Aligned_cols=121 Identities=12% Similarity=0.101 Sum_probs=85.2
Q ss_pred CHHHHHHHHHHHHcCCCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcE
Q 022007 166 NYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRM 245 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~ 245 (304)
.|+++.+.++.|+++ |..+++||.+..... ......++..+|+.+. ..++|+|..++.+++ +++|++|
T Consensus 97 ~~~g~~~~l~~l~~~-g~~~i~Tn~~~~~~~----~~l~~~gl~~~f~~~~-----~~~~~K~~~~~~~~~--~~~~~~~ 164 (231)
T 2p11_A 97 VYPGALNALRHLGAR-GPTVILSDGDVVFQP----RKIARSGLWDEVEGRV-----LIYIHKELMLDQVME--CYPARHY 164 (231)
T ss_dssp BCTTHHHHHHHHHTT-SCEEEEEECCSSHHH----HHHHHTTHHHHTTTCE-----EEESSGGGCHHHHHH--HSCCSEE
T ss_pred cCccHHHHHHHHHhC-CCEEEEeCCCHHHHH----HHHHHcCcHHhcCeeE-----EecCChHHHHHHHHh--cCCCceE
Confidence 477889999999987 566889998763211 1111112333333221 134555778888777 7899999
Q ss_pred EEEcCCchh---hHHHHHHcCCeEEEEccCCC--CccccCCCCCCC-CCcEEECCHHHHHHhhh
Q 022007 246 CMVGDRLDT---DILFGQNAGCKTLLVLSGVT--TQSTLQDPSNNI-QPDYYTNQVSDILELLG 303 (304)
Q Consensus 246 ~~IGD~~~~---Di~~a~~aG~~ti~V~~G~~--~~~~~~~~~~~~-~pd~v~~~l~el~~~l~ 303 (304)
+||||+ .+ |+.+|+++||++++|.+|.. ..+.+.. . .|+++++++.|+.++|.
T Consensus 165 ~~vgDs-~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~----~~~~~~~i~~~~el~~~l~ 223 (231)
T 2p11_A 165 VMVDDK-LRILAAMKKAWGARLTTVFPRQGHYAFDPKEISS----HPPADVTVERIGDLVEMDA 223 (231)
T ss_dssp EEECSC-HHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHH----SCCCSEEESSGGGGGGCGG
T ss_pred EEEcCc-cchhhhhHHHHHcCCeEEEeCCCCCCCcchhccc----cCCCceeecCHHHHHHHHH
Confidence 999999 67 99999999999999999853 2222322 2 39999999999987664
No 116
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=99.21 E-value=2.3e-11 Score=104.02 Aligned_cols=72 Identities=13% Similarity=0.069 Sum_probs=55.8
Q ss_pred cccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCC--CCCCCcEEECCHHH
Q 022007 221 IVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPS--NNIQPDYYTNQVSD 297 (304)
Q Consensus 221 ~~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~--~~~~pd~v~~~l~e 297 (304)
...+-+++.+++.+++++|++++++++|||+ .||+.|++.+| +.|++|++.+ +++... ....+++++.+..+
T Consensus 157 ~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~-~nD~~m~~~~g---~~va~~na~~-~~k~~a~~~~~~a~~v~~~~~~ 230 (244)
T 1s2o_A 157 LPQRSNKGNATQYLQQHLAMEPSQTLVCGDS-GNDIGLFETSA---RGVIVRNAQP-ELLHWYDQWGDSRHYRAQSSHA 230 (244)
T ss_dssp EETTCSHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHTSSS---EEEECTTCCH-HHHHHHHHHCCTTEEECSSCHH
T ss_pred ccCCCChHHHHHHHHHHhCCCHHHEEEECCc-hhhHHHHhccC---cEEEEcCCcH-HHHHHHhcccccceeecCCcch
Confidence 4456677999999999999999999999999 99999999999 6788898754 444200 00027899887654
No 117
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=99.20 E-value=4.9e-12 Score=113.27 Aligned_cols=113 Identities=12% Similarity=0.128 Sum_probs=77.8
Q ss_pred CCHHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCC--------------------CCccc
Q 022007 165 INYYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEK--------------------EPIVV 223 (304)
Q Consensus 165 ~~~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~--------------------~~~~~ 223 (304)
..++++.+.++.++++ |.+ +++||.... ....+-..+|. +....
T Consensus 178 ~~~pg~~~~l~~L~~~-g~~~~ivS~~~~~--------------~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~ 242 (335)
T 3n28_A 178 PLMPELPELVATLHAF-GWKVAIASGGFTY--------------FSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVS 242 (335)
T ss_dssp CCCTTHHHHHHHHHHT-TCEEEEEEEEEHH--------------HHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCC
T ss_pred CcCcCHHHHHHHHHHC-CCEEEEEeCCcHH--------------HHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccC
Confidence 3567888899999887 665 677885431 11111111221 13445
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEE--CCHHHHHHh
Q 022007 224 GKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYT--NQVSDILEL 301 (304)
Q Consensus 224 gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~--~~l~el~~~ 301 (304)
+||+|++|+.+++++|+++++++||||+ .+|+.||+++|+. |.+ +..+ .+.. .+++++ +++.++..+
T Consensus 243 ~kpk~~~~~~~~~~lgi~~~~~v~vGDs-~nDi~~a~~aG~~---va~-~~~~-~~~~-----~a~~v~~~~~l~~v~~~ 311 (335)
T 3n28_A 243 AQTKADILLTLAQQYDVEIHNTVAVGDG-ANDLVMMAAAGLG---VAY-HAKP-KVEA-----KAQTAVRFAGLGGVVCI 311 (335)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSSEE---EEE-SCCH-HHHT-----TSSEEESSSCTHHHHHH
T ss_pred hhhhHHHHHHHHHHcCCChhhEEEEeCC-HHHHHHHHHCCCe---EEe-CCCH-HHHh-----hCCEEEecCCHHHHHHH
Confidence 7999999999999999999999999999 8999999999954 444 4433 3333 466665 456676666
Q ss_pred hh
Q 022007 302 LG 303 (304)
Q Consensus 302 l~ 303 (304)
|.
T Consensus 312 L~ 313 (335)
T 3n28_A 312 LS 313 (335)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 118
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=99.18 E-value=4.8e-11 Score=98.67 Aligned_cols=122 Identities=10% Similarity=-0.117 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHcCCCceEEEecCCCccCCCCCccccChHHHHHHH-HHhhCCCCcc--cC-CCcHHHHHHHHHHcCCCC
Q 022007 167 YYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAM-CASTEKEPIV--VG-KPSTFMMEILSKKFQIAS 242 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~--~g-KP~~~~~~~al~~lg~~~ 242 (304)
++++.+.++.|+++ ...+++||....... ......++..+| ..+...+... .. ||+|..+..++++++.+|
T Consensus 71 ~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~----~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~ 145 (206)
T 1rku_A 71 LEGAVEFVDWLRER-FQVVILSDTFYEFSQ----PLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY 145 (206)
T ss_dssp CTTHHHHHHHHHTT-SEEEEEEEEEHHHHH----HHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTT
T ss_pred CccHHHHHHHHHhc-CcEEEEECChHHHHH----HHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhcC
Confidence 66777888888876 455778886541110 000000011112 1111111211 11 599999999999999999
Q ss_pred CcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEE-ECCHHHHHHhhh
Q 022007 243 SRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYY-TNQVSDILELLG 303 (304)
Q Consensus 243 ~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v-~~~l~el~~~l~ 303 (304)
++++||||+ .+|+.+|+++|+.++ +. . .+.+.. ..|+++ ++++.++.++|.
T Consensus 146 ~~~~~iGD~-~~Di~~a~~aG~~~~---~~-~-~~~~~~----~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 146 YRVIAAGDS-YNDTTMLSEAHAGIL---FH-A-PENVIR----EFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp CEEEEEECS-STTHHHHHHSSEEEE---ES-C-CHHHHH----HCTTSCEECSHHHHHHHHH
T ss_pred CEEEEEeCC-hhhHHHHHhcCccEE---EC-C-cHHHHH----HHhhhccccchHHHHHHHH
Confidence 999999999 799999999998644 22 2 223322 257775 999999988764
No 119
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=99.18 E-value=1.8e-12 Score=107.50 Aligned_cols=106 Identities=9% Similarity=-0.021 Sum_probs=77.0
Q ss_pred CHHHHHHHHHHHHcCCCc-eEEEecCCCccCCCCCccccC--hHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCC
Q 022007 166 NYYKLQYGTLCIRENPGC-LFIATNRDAVGHLTDLQEWPG--AGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIAS 242 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~-~~i~tn~~~~~~~~~~~~~~~--~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~ 242 (304)
.++++.+.++.+++ +. .+++||.+..........+.. ..++..+|+.+++.+....+||+|++|+.+++++|++|
T Consensus 90 ~~~~~~~~l~~l~~--g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 167 (211)
T 2i6x_A 90 ISAEKFDYIDSLRP--DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKP 167 (211)
T ss_dssp ECHHHHHHHHHHTT--TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCCCG
T ss_pred cChHHHHHHHHHHc--CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCCCh
Confidence 36788899999987 55 477898765221100000000 01133445555555666789999999999999999999
Q ss_pred CcEEEEcCCchhhHHHHHHcCCeEEEEccCCC
Q 022007 243 SRMCMVGDRLDTDILFGQNAGCKTLLVLSGVT 274 (304)
Q Consensus 243 ~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~ 274 (304)
+++++|||+ .+|+.+|+++|+.++++.+|..
T Consensus 168 ~~~~~igD~-~~Di~~a~~aG~~~~~~~~~~~ 198 (211)
T 2i6x_A 168 EETLFIDDG-PANVATAERLGFHTYCPDNGEN 198 (211)
T ss_dssp GGEEEECSC-HHHHHHHHHTTCEEECCCTTCC
T ss_pred HHeEEeCCC-HHHHHHHHHcCCEEEEECCHHH
Confidence 999999999 8999999999999999987754
No 120
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=99.17 E-value=4e-11 Score=108.22 Aligned_cols=46 Identities=9% Similarity=0.085 Sum_probs=42.1
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHc--CCeEEEE
Q 022007 223 VGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNA--GCKTLLV 269 (304)
Q Consensus 223 ~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~a--G~~ti~V 269 (304)
..||+|+.|+.+++++|++|++++||||+ ..|+++++++ |+.++.+
T Consensus 309 ~~KPKp~~l~~al~~Lgl~pee~v~VGDs-~~Di~aaraalpgV~vi~~ 356 (387)
T 3nvb_A 309 NWENKADNIRTIQRTLNIGFDSMVFLDDN-PFERNMVREHVPGVTVPEL 356 (387)
T ss_dssp ESSCHHHHHHHHHHHHTCCGGGEEEECSC-HHHHHHHHHHSTTCBCCCC
T ss_pred CCCCcHHHHHHHHHHhCcCcccEEEECCC-HHHHHHHHhcCCCeEEEEc
Confidence 37999999999999999999999999999 8999999999 8666654
No 121
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.16 E-value=5.7e-12 Score=118.73 Aligned_cols=106 Identities=16% Similarity=0.120 Sum_probs=82.6
Q ss_pred CHHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccC--hHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCC
Q 022007 166 NYYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPG--AGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIAS 242 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~--~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~ 242 (304)
.++++.+.++.|+++ |.+ +++||...... ....... ..++..+|+.+++.+.+..+||+|++|+.+++++|++|
T Consensus 101 ~~~~~~~~L~~L~~~-g~~~~i~Tn~~~~~~--~~~~~~~~~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~~p 177 (555)
T 3i28_A 101 INRPMLQAALMLRKK-GFTTAILTNTWLDDR--AERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASP 177 (555)
T ss_dssp ECHHHHHHHHHHHHT-TCEEEEEECCCCCCS--TTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred cChhHHHHHHHHHHC-CCEEEEEeCCCcccc--chhhHHHHHhhhhhhheeEEEeccccCCCCCCHHHHHHHHHHcCCCh
Confidence 478899999999987 665 78899722111 1111111 11355567777778888899999999999999999999
Q ss_pred CcEEEEcCCchhhHHHHHHcCCeEEEEccCCCC
Q 022007 243 SRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTT 275 (304)
Q Consensus 243 ~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~ 275 (304)
++|+||||+ .+|+++|+++||+++++.++...
T Consensus 178 ~~~~~v~D~-~~di~~a~~aG~~~~~~~~~~~~ 209 (555)
T 3i28_A 178 SEVVFLDDI-GANLKPARDLGMVTILVQDTDTA 209 (555)
T ss_dssp GGEEEEESC-HHHHHHHHHHTCEEEECSSHHHH
T ss_pred hHEEEECCc-HHHHHHHHHcCCEEEEECCCccH
Confidence 999999999 89999999999999999887543
No 122
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=99.14 E-value=1.5e-10 Score=100.10 Aligned_cols=50 Identities=22% Similarity=0.242 Sum_probs=41.7
Q ss_pred cEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEE--CCHHHHHHhhh
Q 022007 244 RMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYT--NQVSDILELLG 303 (304)
Q Consensus 244 ~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~--~~l~el~~~l~ 303 (304)
+++||||+ .+|++|++++| ++|.||++...... .+++++ +++.++.++|.
T Consensus 207 ~~~~vGD~-~nDi~~~~~Ag---~~va~~~~~~~~~~------~a~~~~~~~~~~~l~~~l~ 258 (280)
T 3skx_A 207 VTAMVGDG-VNDAPALAQAD---VGIAIGAGTDVAVE------TADIVLVRNDPRDVAAIVE 258 (280)
T ss_dssp CEEEEECT-TTTHHHHHHSS---EEEECSCCSSSCCC------SSSEECSSCCTHHHHHHHH
T ss_pred CEEEEeCC-chhHHHHHhCC---ceEEecCCcHHHHh------hCCEEEeCCCHHHHHHHHH
Confidence 78999999 89999999999 78999987654332 577887 99999988764
No 123
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=99.08 E-value=6.4e-11 Score=104.25 Aligned_cols=102 Identities=11% Similarity=0.035 Sum_probs=74.3
Q ss_pred CCHHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccCh--------HHHHHHHHHhhCCCCcccCCCcHHHHHHHH
Q 022007 165 INYYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGA--------GCMVAAMCASTEKEPIVVGKPSTFMMEILS 235 (304)
Q Consensus 165 ~~~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~--------g~l~~~~~~~~~~~~~~~gKP~~~~~~~al 235 (304)
..|+++.+.++.|+++ |.+ +++||+......... ..+.. .++ .|+.+++.+.. ..||+|+++..++
T Consensus 188 ~~~~g~~e~L~~L~~~-g~~~~v~T~k~~~~~~~~~-~~l~~~~~~~~~~~~~--~~~~~~~~~~~-~~kp~p~~~~~~~ 262 (301)
T 1ltq_A 188 VINPMVVELSKMYALM-GYQIVVVSGRESGTKEDPT-KYYRMTRKWVEDIAGV--PLVMQCQREQG-DTRKDDVVKEEIF 262 (301)
T ss_dssp CBCHHHHHHHHHHHHT-TCEEEEEECSCCCCSSSTT-HHHHHHHHHHHHTTCC--CCSEEEECCTT-CCSCHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHC-CCeEEEEeCCCcccchhHH-HHHHhcccccccccCC--CchheeeccCC-CCcHHHHHHHHHH
Confidence 4589999999999987 665 788998763221111 11111 011 13334444443 4699999999999
Q ss_pred HHcCCCCCc-EEEEcCCchhhHHHHHHcCCeEEEEccC
Q 022007 236 KKFQIASSR-MCMVGDRLDTDILFGQNAGCKTLLVLSG 272 (304)
Q Consensus 236 ~~lg~~~~~-~~~IGD~~~~Di~~a~~aG~~ti~V~~G 272 (304)
++++.++.+ ++||||+ .+|+++|+++||++++|.||
T Consensus 263 ~~~~~~~~~~~~~vgD~-~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 263 WKHIAPHFDVKLAIDDR-TQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp HHHTTTTCEEEEEEECC-HHHHHHHHHTTCCEEECSCC
T ss_pred HHHhccccceEEEeCCc-HHHHHHHHHcCCeEEEecCC
Confidence 999887655 7999999 99999999999999999999
No 124
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=99.08 E-value=2.3e-09 Score=93.72 Aligned_cols=61 Identities=18% Similarity=0.153 Sum_probs=48.5
Q ss_pred HHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEE--CCHHHHHHhhh
Q 022007 232 EILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYT--NQVSDILELLG 303 (304)
Q Consensus 232 ~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~--~~l~el~~~l~ 303 (304)
..++++++.+ ++|+||||+ .+|+.+|+++|+. |.+|+.... .. ..|++++ +++.++.++|.
T Consensus 215 ~~~~~~l~~~-~~~~~vGDs-~~Di~~a~~ag~~---v~~~~~~~~-~~-----~~ad~v~~~~~~~~l~~~l~ 277 (287)
T 3a1c_A 215 SEEVKKLQAK-EVVAFVGDG-INDAPALAQADLG---IAVGSGSDV-AV-----ESGDIVLIRDDLRDVVAAIQ 277 (287)
T ss_dssp HHHHHHHTTT-CCEEEEECT-TTCHHHHHHSSEE---EEECCCSCC-SS-----CCSSEEESSSCTHHHHHHHH
T ss_pred HHHHHHHhcC-CeEEEEECC-HHHHHHHHHCCee---EEeCCCCHH-HH-----hhCCEEEeCCCHHHHHHHHH
Confidence 5567788888 999999999 7999999999964 555654322 22 3699999 99999988775
No 125
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=98.63 E-value=1.8e-11 Score=105.97 Aligned_cols=114 Identities=14% Similarity=0.075 Sum_probs=81.8
Q ss_pred CCCHHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCC
Q 022007 164 HINYYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIAS 242 (304)
Q Consensus 164 ~~~~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~ 242 (304)
...++++.+.++.|+++ |.+ +++||....... .+....++..+|..+. |+.+..+++.++.++
T Consensus 135 ~~~~~g~~~~l~~L~~~-g~~~~i~T~~~~~~~~----~~~~~~gl~~~f~~~~-----------p~~k~~~~~~l~~~~ 198 (263)
T 2yj3_A 135 DVPRPNLKDYLEKLKNE-GLKIIILSGDKEDKVK----ELSKELNIQEYYSNLS-----------PEDKVRIIEKLKQNG 198 (263)
Confidence 34578888999999876 654 678887663221 1222222434444333 556788999999999
Q ss_pred CcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEE--CCHHHHHHhhh
Q 022007 243 SRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYT--NQVSDILELLG 303 (304)
Q Consensus 243 ~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~--~~l~el~~~l~ 303 (304)
++++||||+ .+|+.+++++| ++|.||++.... . ..||+++ +++.++.+++.
T Consensus 199 ~~~~~VGD~-~~D~~aa~~Ag---v~va~g~~~~~~-~-----~~ad~v~~~~~l~~l~~~l~ 251 (263)
T 2yj3_A 199 NKVLMIGDG-VNDAAALALAD---VSVAMGNGVDIS-K-----NVADIILVSNDIGTLLGLIK 251 (263)
Confidence 999999999 89999999999 778888654322 2 3689999 99999987664
No 126
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=99.03 E-value=4.1e-11 Score=97.47 Aligned_cols=100 Identities=26% Similarity=0.228 Sum_probs=73.8
Q ss_pred CHHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCc
Q 022007 166 NYYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSR 244 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~ 244 (304)
.++++.+.++.++++ |.+ +++||...... ......++..+|+.+++.+....+||+|.+|+.+++++|++ +
T Consensus 83 ~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~-----~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~ 154 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQ-GGRHFLVSHRNDQVL-----EILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--S 154 (190)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEECSSCTHHH-----HHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--S
T ss_pred cCcCHHHHHHHHHHC-CCcEEEEECCcHHHH-----HHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--e
Confidence 356788888888877 654 67788643110 01111112233444556666778999999999999999998 9
Q ss_pred EEEEcCCchhhHHHHHHcCCeEEEEccCCC
Q 022007 245 MCMVGDRLDTDILFGQNAGCKTLLVLSGVT 274 (304)
Q Consensus 245 ~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~ 274 (304)
+++|||+ .+|++||+++|+.+++|.+|..
T Consensus 155 ~~~iGD~-~~Di~~a~~aG~~~~~~~~~~~ 183 (190)
T 2fi1_A 155 GLVIGDR-PIDIEAGQAAGLDTHLFTSIVN 183 (190)
T ss_dssp EEEEESS-HHHHHHHHHTTCEEEECSCHHH
T ss_pred EEEEcCC-HHHHHHHHHcCCeEEEECCCCC
Confidence 9999999 8999999999999999987643
No 127
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=99.02 E-value=1.6e-09 Score=92.14 Aligned_cols=51 Identities=14% Similarity=0.112 Sum_probs=43.1
Q ss_pred cCEEEEeE--EEEcC-----C-ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhC
Q 022007 25 VDAFLFDC--VIWKG-----D-KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSL 79 (304)
Q Consensus 25 ~k~i~fDi--tL~~~-----~-~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~l 79 (304)
+++|+||+ ||++. . .+.+.+.++|++|+++| +++++|+ |+...+.+.+..+
T Consensus 1 ikli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~~~g-~v~iaTG---R~~~~~~~~~~~l 59 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERF-DTYIVTG---RSPEEISRFLPLD 59 (239)
T ss_dssp -CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHHS-EEEEECS---SCHHHHHHHSCSS
T ss_pred CeEEEEecCCCCcCCCCCcccCCCCHHHHHHHHHHhcCC-CEEEEeC---CCHHHHHHHhccc
Confidence 57899999 99973 2 45667899999999999 9999999 9999888887665
No 128
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=98.97 E-value=4.8e-10 Score=96.58 Aligned_cols=62 Identities=15% Similarity=0.259 Sum_probs=51.6
Q ss_pred hhhccCEEEEeE--EEEcC--------------------------CccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHH
Q 022007 21 LFDSVDAFLFDC--VIWKG--------------------------DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQY 72 (304)
Q Consensus 21 ~~~~~k~i~fDi--tL~~~--------------------------~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~ 72 (304)
.-+.+++|+||+ ||+++ ..++||+.++|+.|+++|++++|+||++...+..+
T Consensus 55 ~~~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~ 134 (258)
T 2i33_A 55 GTEKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDAT 134 (258)
T ss_dssp CCSSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHH
T ss_pred cCCCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHH
Confidence 345789999999 99987 57899999999999999999999999544446677
Q ss_pred HHHHHhCCCc
Q 022007 73 AHKFHSLGVS 82 (304)
Q Consensus 73 ~~~l~~lG~~ 82 (304)
.+.|+.+|++
T Consensus 135 ~~~L~~~Gl~ 144 (258)
T 2i33_A 135 IKNLERVGAP 144 (258)
T ss_dssp HHHHHHHTCS
T ss_pred HHHHHHcCCC
Confidence 7777777775
No 129
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=98.90 E-value=2.6e-11 Score=102.89 Aligned_cols=120 Identities=8% Similarity=-0.048 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHcCCCc-eEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCccc--------CCCcHHH-HH----
Q 022007 167 YYKLQYGTLCIRENPGC-LFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVV--------GKPSTFM-ME---- 232 (304)
Q Consensus 167 ~~~~~~~l~~l~~~~~~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~--------gKP~~~~-~~---- 232 (304)
++++.+.++.|+++ |. .+++||....... .... ++..+ +.+++.+.... .||+|.+ ++
T Consensus 79 ~pg~~~~l~~L~~~-g~~~~ivS~~~~~~~~----~~l~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~ 150 (236)
T 2fea_A 79 REGFREFVAFINEH-EIPFYVISGGMDFFVY----PLLE--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGC 150 (236)
T ss_dssp CTTHHHHHHHHHHH-TCCEEEEEEEEHHHHH----HHHT--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSS
T ss_pred CccHHHHHHHHHhC-CCeEEEEeCCcHHHHH----HHHh--cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccCC
Confidence 67888899999877 65 4788997552211 1111 11122 34454444332 7999984 55
Q ss_pred ---HHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCC-CCcEEECCHHHHHHhhh
Q 022007 233 ---ILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNI-QPDYYTNQVSDILELLG 303 (304)
Q Consensus 233 ---~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~-~pd~v~~~l~el~~~l~ 303 (304)
.++++++++|++++||||+ .+|+.+|+++|+.++ .+|.. +.+.. . .|+++++++.|+.++|.
T Consensus 151 ~K~~~~~~~~~~~~~~~~vGDs-~~Di~~a~~aG~~~~--~~~~~--~~~~~----~~~~~~~~~~~~el~~~l~ 216 (236)
T 2fea_A 151 CKPSVIHELSEPNQYIIMIGDS-VTDVEAAKLSDLCFA--RDYLL--NECRE----QNLNHLPYQDFYEIRKEIE 216 (236)
T ss_dssp CHHHHHHHHCCTTCEEEEEECC-GGGHHHHHTCSEEEE--CHHHH--HHHHH----TTCCEECCSSHHHHHHHHH
T ss_pred cHHHHHHHHhccCCeEEEEeCC-hHHHHHHHhCCeeee--chHHH--HHHHH----CCCCeeecCCHHHHHHHHH
Confidence 8899999999999999999 899999999999875 34421 22221 2 38999999999988775
No 130
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=98.76 E-value=5.3e-09 Score=85.95 Aligned_cols=68 Identities=22% Similarity=0.303 Sum_probs=56.3
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECC--HHHHHHh
Q 022007 224 GKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQ--VSDILEL 301 (304)
Q Consensus 224 gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~--l~el~~~ 301 (304)
++|+|..+..+++++|++++++++|||+ .+|++||+++|+. |.++ .. +.+.. .|++++++ +.|+.++
T Consensus 141 ~~~K~~~l~~~~~~lgi~~~~~~~iGD~-~~Di~~~~~ag~~---~~~~-~~-~~~~~-----~a~~v~~~~~~~~l~~~ 209 (211)
T 1l7m_A 141 ENAKGEILEKIAKIEGINLEDTVAVGDG-ANDISMFKKAGLK---IAFC-AK-PILKE-----KADICIEKRDLREILKY 209 (211)
T ss_dssp TTHHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHCSEE---EEES-CC-HHHHT-----TCSEEECSSCGGGGGGG
T ss_pred CccHHHHHHHHHHHcCCCHHHEEEEecC-hhHHHHHHHCCCE---EEEC-CC-HHHHh-----hcceeecchhHHHHHHh
Confidence 5678999999999999999999999999 8999999999964 4444 22 33443 69999998 9998876
Q ss_pred h
Q 022007 302 L 302 (304)
Q Consensus 302 l 302 (304)
|
T Consensus 210 l 210 (211)
T 1l7m_A 210 I 210 (211)
T ss_dssp C
T ss_pred h
Confidence 5
No 131
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.74 E-value=6.7e-09 Score=95.58 Aligned_cols=112 Identities=15% Similarity=0.132 Sum_probs=78.1
Q ss_pred CHHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCC--------------------CcccC
Q 022007 166 NYYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKE--------------------PIVVG 224 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~--------------------~~~~g 224 (304)
.++++.+.++.|+++ |.+ +++||..... ...+-..+|.+ ....+
T Consensus 257 ~~pg~~e~l~~Lk~~-G~~~~ivS~~~~~~--------------~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~ 321 (415)
T 3p96_A 257 LMPGARTTLRTLRRL-GYACGVVSGGFRRI--------------IEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDR 321 (415)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEEEEEHHH--------------HHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCH
T ss_pred cCccHHHHHHHHHHC-CCEEEEEcCCcHHH--------------HHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCC
Confidence 467788888899887 665 6788854411 11111112221 23348
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEEC--CHHHHHHhh
Q 022007 225 KPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTN--QVSDILELL 302 (304)
Q Consensus 225 KP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~--~l~el~~~l 302 (304)
||+|++|+.+++++|++|++++||||+ .+|+.||+++|+.++ + +.. +.+.. .+++++. ++.++..+|
T Consensus 322 kpk~~~~~~~~~~~gi~~~~~i~vGD~-~~Di~~a~~aG~~va---~-~~~-~~~~~-----~ad~~i~~~~l~~ll~~l 390 (415)
T 3p96_A 322 AGKATALREFAQRAGVPMAQTVAVGDG-ANDIDMLAAAGLGIA---F-NAK-PALRE-----VADASLSHPYLDTVLFLL 390 (415)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSSEEEE---E-SCC-HHHHH-----HCSEEECSSCTTHHHHHT
T ss_pred cchHHHHHHHHHHcCcChhhEEEEECC-HHHHHHHHHCCCeEE---E-CCC-HHHHH-----hCCEEEccCCHHHHHHHh
Confidence 999999999999999999999999999 799999999996554 3 333 33332 5777754 677777665
Q ss_pred h
Q 022007 303 G 303 (304)
Q Consensus 303 ~ 303 (304)
.
T Consensus 391 ~ 391 (415)
T 3p96_A 391 G 391 (415)
T ss_dssp T
T ss_pred C
Confidence 3
No 132
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=98.70 E-value=6.1e-09 Score=84.90 Aligned_cols=117 Identities=10% Similarity=0.004 Sum_probs=76.0
Q ss_pred CHHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCC-CcccCCCcHHHHHHHHHHcCCCCC
Q 022007 166 NYYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKE-PIVVGKPSTFMMEILSKKFQIASS 243 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~-~~~~gKP~~~~~~~al~~lg~~~~ 243 (304)
.++++.+.++.++++ |.+ +++||......... ... + +..++......+ .....+|.+.....+++.+ +++
T Consensus 80 ~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~--~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~ 151 (201)
T 4ap9_A 80 VSPEARELVETLREK-GFKVVLISGSFEEVLEPF--KEL--G-DEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDG 151 (201)
T ss_dssp CCHHHHHHHHHHHHT-TCEEEEEEEEETTTSGGG--TTT--S-SEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--TTS
T ss_pred CChhHHHHHHHHHHC-CCeEEEEeCCcHHHHHHH--HHc--C-chhheeeEEeeCCceECCcCCccCHHHHHHhc--CcC
Confidence 578899999999987 554 67888655222111 111 1 111111111111 1112466666666777777 899
Q ss_pred cEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhhC
Q 022007 244 RMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLGQ 304 (304)
Q Consensus 244 ~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~~ 304 (304)
++++|||+ .+|+.||+++|+. |.+++... .|+++++++.|+.++|++
T Consensus 152 ~~i~iGD~-~~Di~~~~~ag~~---v~~~~~~~----------~ad~v~~~~~el~~~l~~ 198 (201)
T 4ap9_A 152 FILAMGDG-YADAKMFERADMG---IAVGREIP----------GADLLVKDLKELVDFIKN 198 (201)
T ss_dssp CEEEEECT-TCCHHHHHHCSEE---EEESSCCT----------TCSEEESSHHHHHHHHHT
T ss_pred cEEEEeCC-HHHHHHHHhCCce---EEECCCCc----------cccEEEccHHHHHHHHHH
Confidence 99999999 7999999999964 45554432 489999999999988863
No 133
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=98.58 E-value=3.6e-09 Score=86.80 Aligned_cols=109 Identities=11% Similarity=0.045 Sum_probs=77.0
Q ss_pred CHHHHHHHHHHHHcCCCc-eEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCc
Q 022007 166 NYYKLQYGTLCIRENPGC-LFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSR 244 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~ 244 (304)
.++++.+.++.|++++|. .+++||...... .......++ |+.+++. .+++++|++|++
T Consensus 74 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~----~~~l~~~gl---f~~i~~~--------------~~~~~~~~~~~~ 132 (193)
T 2i7d_A 74 PIPGALDAVREMNDLPDTQVFICTSPLLKYH----HCVGEKYRW---VEQHLGP--------------QFVERIILTRDK 132 (193)
T ss_dssp BCTTHHHHHHHHHTSTTEEEEEEECCCSSCT----TTHHHHHHH---HHHHHCH--------------HHHTTEEECSCG
T ss_pred cCcCHHHHHHHHHhCCCCeEEEEeCCChhhH----HHHHHHhCc---hhhhcCH--------------HHHHHcCCCccc
Confidence 467888999999875244 578899766221 122222223 5555553 278899999999
Q ss_pred EEEEcCCchhh----HHHHH-HcCCeEEEEccCCCCccccCCCCCCCCCcE-EECCH-HHHHHhhh
Q 022007 245 MCMVGDRLDTD----ILFGQ-NAGCKTLLVLSGVTTQSTLQDPSNNIQPDY-YTNQV-SDILELLG 303 (304)
Q Consensus 245 ~~~IGD~~~~D----i~~a~-~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~-v~~~l-~el~~~l~ 303 (304)
++||||+ .+| +.+|+ ++||+++++.++...... ..|++ .+.++ .++.++|.
T Consensus 133 ~~~vgDs-~~dD~~~i~~A~~~aG~~~i~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~~ 190 (193)
T 2i7d_A 133 TVVLGDL-LIDDKDTVRGQEETPSWEHILFTCCHNRHLV-------LPPTRRRLLSWSDNWREILD 190 (193)
T ss_dssp GGBCCSE-EEESSSCCCSSCSSCSSEEEEECCGGGTTCC-------CCTTSCEECSTTSCHHHHHH
T ss_pred EEEECCc-hhhCcHHHhhcccccccceEEEEeccCcccc-------cccchHHHhhHHHHHHHHhh
Confidence 9999999 778 99999 999999999887554322 13555 69999 67777665
No 134
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=98.52 E-value=7e-09 Score=89.39 Aligned_cols=51 Identities=20% Similarity=0.182 Sum_probs=42.5
Q ss_pred hccCEEEEeE--EEEcCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHH
Q 022007 23 DSVDAFLFDC--VIWKGDK-LIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFH 77 (304)
Q Consensus 23 ~~~k~i~fDi--tL~~~~~-~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~ 77 (304)
..+|+|+||+ ||++.+. +.+.++++|++|+++ ++++++|+ |+...+.+.+.
T Consensus 11 ~~~kli~~DlDGTLl~~~~~is~~~~~al~~l~~~-i~v~iaTG---R~~~~~~~~l~ 64 (262)
T 2fue_A 11 KERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSR-VQIGVVGG---SDYCKIAEQLG 64 (262)
T ss_dssp --CEEEEEESBTTTBSTTSCCCHHHHHHHHHHTTT-SEEEEECS---SCHHHHHHHHS
T ss_pred cCeEEEEEeCccCCCCCCCcCCHHHHHHHHHHHhC-CEEEEEcC---CCHHHHHHHHh
Confidence 3689999999 9998765 556789999999999 99999999 88887777664
No 135
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=98.49 E-value=8.3e-09 Score=84.92 Aligned_cols=108 Identities=11% Similarity=-0.017 Sum_probs=77.1
Q ss_pred CHHHHHHHHHHHHcC-CCceEEEecCCCccCCCCCccccChHHHHH-HHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCC
Q 022007 166 NYYKLQYGTLCIREN-PGCLFIATNRDAVGHLTDLQEWPGAGCMVA-AMCASTEKEPIVVGKPSTFMMEILSKKFQIASS 243 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~-~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~-~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~ 243 (304)
.++++.+.++.|+++ +-..+|+||...... .......++.. +|. ..+++++|++|+
T Consensus 76 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~----~~~l~~~~l~~~~f~------------------~~~~~~l~~~~~ 133 (197)
T 1q92_A 76 PLPGAVEAVKEMASLQNTDVFICTSPIKMFK----YCPYEKYAWVEKYFG------------------PDFLEQIVLTRD 133 (197)
T ss_dssp BCTTHHHHHHHHHHSTTEEEEEEECCCSCCS----SHHHHHHHHHHHHHC------------------GGGGGGEEECSC
T ss_pred cCcCHHHHHHHHHhcCCCeEEEEeCCccchH----HHHHHHhchHHHhch------------------HHHHHHhccCCc
Confidence 477889999999875 234588999876321 11222222333 442 567888999999
Q ss_pred cEEEEcCCchhh----HHHHH-HcCCeEEEEccCCCCccccCCCCCCCCCcE-EECCH-HHHHHhhh
Q 022007 244 RMCMVGDRLDTD----ILFGQ-NAGCKTLLVLSGVTTQSTLQDPSNNIQPDY-YTNQV-SDILELLG 303 (304)
Q Consensus 244 ~~~~IGD~~~~D----i~~a~-~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~-v~~~l-~el~~~l~ 303 (304)
+++||||+ ..| +.+|+ ++||+++++.++...... ..|++ +++++ .++.++|.
T Consensus 134 ~~~~vgDs-~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~-------~~~~~~~v~~~~~~l~~~l~ 192 (197)
T 1q92_A 134 KTVVSADL-LIDDRPDITGAEPTPSWEHVLFTACHNQHLQ-------LQPPRRRLHSWADDWKAILD 192 (197)
T ss_dssp STTSCCSE-EEESCSCCCCSCSSCSSEEEEECCTTTTTCC-------CCTTCEEECCTTSCHHHHHH
T ss_pred cEEEECcc-cccCCchhhhcccCCCceEEEecCccccccc-------ccccchhhhhHHHHHHHHhc
Confidence 99999999 788 99999 999999999888654322 24545 79999 47777764
No 136
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=98.43 E-value=5.7e-07 Score=75.22 Aligned_cols=87 Identities=7% Similarity=-0.095 Sum_probs=64.0
Q ss_pred CHHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCC--------------------CcccC
Q 022007 166 NYYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKE--------------------PIVVG 224 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~--------------------~~~~g 224 (304)
.++++.+.++.|+++ |.+ +|+||..... ...+-..+|.+ ....+
T Consensus 93 ~~~g~~~~l~~l~~~-g~~~~ivS~~~~~~--------------~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 157 (232)
T 3fvv_A 93 LTVQAVDVVRGHLAA-GDLCALVTATNSFV--------------TAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFR 157 (232)
T ss_dssp CCHHHHHHHHHHHHT-TCEEEEEESSCHHH--------------HHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSST
T ss_pred cCHHHHHHHHHHHHC-CCEEEEEeCCCHHH--------------HHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcc
Confidence 378999999999887 665 6788865511 11111111211 23346
Q ss_pred CCcHHHHHHHHHHcC---CCCCcEEEEcCCchhhHHHHHHcCCeEEE
Q 022007 225 KPSTFMMEILSKKFQ---IASSRMCMVGDRLDTDILFGQNAGCKTLL 268 (304)
Q Consensus 225 KP~~~~~~~al~~lg---~~~~~~~~IGD~~~~Di~~a~~aG~~ti~ 268 (304)
+|++..++.+++.+| ++|++|++|||+ .+|+.+++.+|+..+.
T Consensus 158 ~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs-~~D~~~~~~ag~~~~~ 203 (232)
T 3fvv_A 158 EGKVVRVNQWLAGMGLALGDFAESYFYSDS-VNDVPLLEAVTRPIAA 203 (232)
T ss_dssp HHHHHHHHHHHHHTTCCGGGSSEEEEEECC-GGGHHHHHHSSEEEEE
T ss_pred hHHHHHHHHHHHHcCCCcCchhheEEEeCC-HhhHHHHHhCCCeEEE
Confidence 778899999999999 999999999999 8999999999966543
No 137
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=98.43 E-value=1.5e-07 Score=73.11 Aligned_cols=60 Identities=15% Similarity=0.127 Sum_probs=49.6
Q ss_pred ccCEEEEeE--EEEcCC-----ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCcc
Q 022007 24 SVDAFLFDC--VIWKGD-----KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSV 83 (304)
Q Consensus 24 ~~k~i~fDi--tL~~~~-----~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~ 83 (304)
++|+|+||+ ||++.. .++|++.++|++|+++|+.++++||.+++......+.++++|++.
T Consensus 2 ~~k~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 2 NAMTIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp CCCEEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred CCeEEEEECcCCCCCCCCccccccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 478999999 999865 357899999999999999999999944444677777888888764
No 138
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=98.41 E-value=1.4e-08 Score=90.53 Aligned_cols=53 Identities=15% Similarity=0.120 Sum_probs=40.2
Q ss_pred CCCCCc----EEEEcCCchhhHHHHHHc----CCeEEEEccCCCCccccCCCCCCCCCcEEECC--HHHHHHhh
Q 022007 239 QIASSR----MCMVGDRLDTDILFGQNA----GCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQ--VSDILELL 302 (304)
Q Consensus 239 g~~~~~----~~~IGD~~~~Di~~a~~a----G~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~--l~el~~~l 302 (304)
|+++++ +++|||+ .||+.|++.+ | +.|++ ++. +.++. .+++++.+ .+.+.++|
T Consensus 214 gi~~~~~~~~via~GDs-~NDi~ml~~A~~~~g---~~vam-na~-~~lk~-----~Ad~v~~~~~~dGV~~~l 276 (332)
T 1y8a_A 214 GYCESKGIDFPVVVGDS-ISDYKMFEAARGLGG---VAIAF-NGN-EYALK-----HADVVIISPTAMSEAKVI 276 (332)
T ss_dssp HHHHHHTCSSCEEEECS-GGGHHHHHHHHHTTC---EEEEE-SCC-HHHHT-----TCSEEEECSSTHHHHHHH
T ss_pred ccChhhcCceEEEEeCc-HhHHHHHHHHhhcCC---eEEEe-cCC-HHHHh-----hCcEEecCCCCCHHHHHH
Confidence 677888 9999999 9999999999 9 55666 554 34543 68999887 44455444
No 139
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.10 E-value=1.9e-05 Score=76.54 Aligned_cols=51 Identities=18% Similarity=0.186 Sum_probs=42.1
Q ss_pred CcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEE--CCHHHHHHhhh
Q 022007 243 SRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYT--NQVSDILELLG 303 (304)
Q Consensus 243 ~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~--~~l~el~~~l~ 303 (304)
++++||||+ .||+.|.+++| ++|++|++.... . ..+|+++ +++..+.+.+.
T Consensus 519 ~~v~~vGDg-~ND~~al~~A~---vgiamg~g~~~a-~-----~~AD~vl~~~~~~~i~~~i~ 571 (645)
T 3j08_A 519 EVVAFVGDG-INDAPALAQAD---LGIAVGSGSDVA-V-----ESGDIVLIRDDLRDVVAAIQ 571 (645)
T ss_dssp CCEEEEECS-SSCHHHHHHSS---EEEEECCCSCCS-S-----CCSSSEESSCCTTHHHHHHH
T ss_pred CeEEEEeCC-HhHHHHHHhCC---EEEEeCCCcHHH-H-----HhCCEEEecCCHHHHHHHHH
Confidence 789999999 89999999999 999999766432 2 2689998 77888877653
No 140
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=97.99 E-value=1e-05 Score=61.48 Aligned_cols=43 Identities=14% Similarity=0.194 Sum_probs=36.6
Q ss_pred cCEEEEeE--EEEcCCc-------cCccHHHHHHHHHHCCCcEEEEeCCCCc
Q 022007 25 VDAFLFDC--VIWKGDK-------LIDGVRQTLDVLRSKGKKLIFVTNNSRR 67 (304)
Q Consensus 25 ~k~i~fDi--tL~~~~~-------~~~~a~eal~~L~~~G~~~~i~Tn~s~r 67 (304)
+|+|+||+ ||+++.. +.+++.++|++|+++|++++++||++..
T Consensus 1 ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~ 52 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQLGFEIVISTARNMR 52 (126)
T ss_dssp CCEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred CCEEEEecCCCCCCCCCCccccCCCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence 58999999 9997653 5578999999999999999999995543
No 141
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=97.89 E-value=9e-05 Score=72.69 Aligned_cols=50 Identities=18% Similarity=0.184 Sum_probs=41.6
Q ss_pred CcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEE--CCHHHHHHhh
Q 022007 243 SRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYT--NQVSDILELL 302 (304)
Q Consensus 243 ~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~--~~l~el~~~l 302 (304)
++++||||+ .||+.|.++|| ++|++|++... .. ..+|+++ +++..+.+.+
T Consensus 597 ~~v~~vGDg-~ND~~al~~A~---vgiamg~g~~~-a~-----~~AD~vl~~~~~~~i~~~i 648 (723)
T 3j09_A 597 EVVAFVGDG-INDAPALAQAD---LGIAVGSGSDV-AV-----ESGDIVLIRDDLRDVVAAI 648 (723)
T ss_dssp CCEEEEECS-STTHHHHHHSS---EEEECCCCSCC-SS-----CCSSEECSSCCTTHHHHHH
T ss_pred CeEEEEECC-hhhHHHHhhCC---EEEEeCCCcHH-HH-----HhCCEEEeCCCHHHHHHHH
Confidence 789999999 89999999999 99999976643 22 2689998 7788877665
No 142
>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*
Probab=97.85 E-value=2.4e-05 Score=72.99 Aligned_cols=41 Identities=22% Similarity=0.406 Sum_probs=38.5
Q ss_pred HHHHHHHcCCCCCcEEEEcCCchhhHHHHH-HcCCeEEEEcc
Q 022007 231 MEILSKKFQIASSRMCMVGDRLDTDILFGQ-NAGCKTLLVLS 271 (304)
Q Consensus 231 ~~~al~~lg~~~~~~~~IGD~~~~Di~~a~-~aG~~ti~V~~ 271 (304)
+..+++.+|.+.+++++|||++.+||..++ .+||+|++|..
T Consensus 351 ~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViP 392 (555)
T 2jc9_A 351 SDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIP 392 (555)
T ss_dssp HHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECT
T ss_pred HHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEe
Confidence 589999999999999999999999999997 99999999954
No 143
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=97.83 E-value=3.5e-05 Score=65.70 Aligned_cols=59 Identities=17% Similarity=0.303 Sum_probs=50.3
Q ss_pred cCEEEEeE--EEEcCC---------------------------ccCccHHHHHHHHHHCCCcEEEEeCCCCc-CHHHHHH
Q 022007 25 VDAFLFDC--VIWKGD---------------------------KLIDGVRQTLDVLRSKGKKLIFVTNNSRR-SRRQYAH 74 (304)
Q Consensus 25 ~k~i~fDi--tL~~~~---------------------------~~~~~a~eal~~L~~~G~~~~i~Tn~s~r-~~~~~~~ 74 (304)
-++|+||+ ||+++. .++||+.++|+.|+++|++++|+||.+.+ .++...+
T Consensus 58 ~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~ 137 (260)
T 3pct_A 58 KKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVD 137 (260)
T ss_dssp CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHH
T ss_pred CCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHH
Confidence 35999999 777542 36889999999999999999999997666 7788889
Q ss_pred HHHhCCCcc
Q 022007 75 KFHSLGVSV 83 (304)
Q Consensus 75 ~l~~lG~~~ 83 (304)
.|+++|++.
T Consensus 138 ~L~~lGi~~ 146 (260)
T 3pct_A 138 DMKRLGFTG 146 (260)
T ss_dssp HHHHHTCCC
T ss_pred HHHHcCcCc
Confidence 999999985
No 144
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=97.81 E-value=0.0001 Score=72.29 Aligned_cols=55 Identities=16% Similarity=0.310 Sum_probs=42.0
Q ss_pred cCEEEEeE------EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 25 VDAFLFDC------VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 25 ~k~i~fDi------tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
...+++.. .+.-.+.+-|+++++|++|+++|++++++|| ++........+++|++
T Consensus 534 ~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTG---d~~~~a~~ia~~lgi~ 594 (736)
T 3rfu_A 534 ASVMFMAVDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTG---DSKRTAEAVAGTLGIK 594 (736)
T ss_dssp CEEEEEEETTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECS---SCHHHHHHHHHHHTCC
T ss_pred CeEEEEEECCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCC
Confidence 44556655 2334677889999999999999999999999 7777666666666664
No 145
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=97.78 E-value=0.00029 Score=71.81 Aligned_cols=44 Identities=20% Similarity=0.133 Sum_probs=38.8
Q ss_pred CCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCcc
Q 022007 37 GDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSV 83 (304)
Q Consensus 37 ~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~ 83 (304)
.+.+-|++.++|++|++.|++++++|+ +++.......+++|+..
T Consensus 602 ~Dp~r~~~~~aI~~l~~aGI~vvmiTG---d~~~tA~~ia~~lgi~~ 645 (1034)
T 3ixz_A 602 IDPPRATVPDAVLKCRTAGIRVIMVTG---DHPITAKAIAASVGIIS 645 (1034)
T ss_pred cCCCchhHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHHcCCCC
Confidence 456788999999999999999999999 88888888888899853
No 146
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=97.67 E-value=4.7e-06 Score=68.38 Aligned_cols=35 Identities=9% Similarity=0.105 Sum_probs=29.0
Q ss_pred HHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeE
Q 022007 231 MEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKT 266 (304)
Q Consensus 231 ~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~t 266 (304)
|.++++.+|.++++|++|+|+ ..++.++.++|+..
T Consensus 126 ~lK~L~~Lg~~~~~~vivDDs-~~~~~~~~~ngi~i 160 (195)
T 2hhl_A 126 YVKDLSRLGRELSKVIIVDNS-PASYIFHPENAVPV 160 (195)
T ss_dssp EECCGGGSSSCGGGEEEEESC-GGGGTTCGGGEEEC
T ss_pred eeeeHhHhCCChhHEEEEECC-HHHhhhCccCccEE
Confidence 334456778999999999999 89999999999543
No 147
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=97.58 E-value=0.00074 Score=68.61 Aligned_cols=44 Identities=16% Similarity=0.219 Sum_probs=37.1
Q ss_pred CCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCcc
Q 022007 37 GDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSV 83 (304)
Q Consensus 37 ~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~ 83 (304)
.+.+-|++.++|+.|++.|++++++|+ ..........+++|+.-
T Consensus 601 ~D~lr~~~~~~I~~l~~~Gi~v~miTG---D~~~ta~~ia~~lgi~~ 644 (995)
T 3ar4_A 601 LDPPRKEVMGSIQLCRDAGIRVIMITG---DNKGTAIAICRRIGIFG 644 (995)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHHTSSC
T ss_pred cCCCchhHHHHHHHHHHcCCEEEEECC---CCHHHHHHHHHHcCcCC
Confidence 457789999999999999999999999 66777677777788853
No 148
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=97.55 E-value=3.4e-05 Score=65.88 Aligned_cols=60 Identities=17% Similarity=0.272 Sum_probs=50.4
Q ss_pred ccCEEEEeE--EEEcCC---------------------------ccCccHHHHHHHHHHCCCcEEEEeCCCCc-CHHHHH
Q 022007 24 SVDAFLFDC--VIWKGD---------------------------KLIDGVRQTLDVLRSKGKKLIFVTNNSRR-SRRQYA 73 (304)
Q Consensus 24 ~~k~i~fDi--tL~~~~---------------------------~~~~~a~eal~~L~~~G~~~~i~Tn~s~r-~~~~~~ 73 (304)
..++|+||+ ||.++. .++||+.+.|+.|+++|++++|+||.+.+ .++...
T Consensus 57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~ 136 (262)
T 3ocu_A 57 KKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTI 136 (262)
T ss_dssp CEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHH
T ss_pred CCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHH
Confidence 456999999 777542 25889999999999999999999996665 677888
Q ss_pred HHHHhCCCcc
Q 022007 74 HKFHSLGVSV 83 (304)
Q Consensus 74 ~~l~~lG~~~ 83 (304)
+.|+++|++.
T Consensus 137 ~~L~~lGi~~ 146 (262)
T 3ocu_A 137 DDMKRLGFNG 146 (262)
T ss_dssp HHHHHHTCSC
T ss_pred HHHHHcCcCc
Confidence 8999999985
No 149
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=97.54 E-value=5.9e-05 Score=64.05 Aligned_cols=51 Identities=16% Similarity=0.100 Sum_probs=43.8
Q ss_pred ccCEEEEeE--EEEcCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHH
Q 022007 24 SVDAFLFDC--VIWKGDK-LIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFH 77 (304)
Q Consensus 24 ~~k~i~fDi--tL~~~~~-~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~ 77 (304)
.+|+|+||+ ||++.+. +.+.+.++|++|+++|++++++|+ |+...+.+.|.
T Consensus 3 ~~kli~~DlDGTLl~~~~~i~~~~~~~l~~l~~~g~~~~iaTG---R~~~~~~~~l~ 56 (246)
T 3f9r_A 3 KRVLLLFDVDGTLTPPRLCQTDEMRALIKRARGAGFCVGTVGG---SDFAKQVEQLG 56 (246)
T ss_dssp CSEEEEECSBTTTBSTTSCCCHHHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHC
T ss_pred CceEEEEeCcCCcCCCCCccCHHHHHHHHHHHHCCCEEEEECC---CCHHHHHHHhh
Confidence 479999999 9998765 556789999999999999999999 88887766654
No 150
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=97.48 E-value=0.00013 Score=58.47 Aligned_cols=101 Identities=9% Similarity=-0.055 Sum_probs=62.5
Q ss_pred CHHHHHHHHHHHHcCCCceEEEecCCCccCCCCCccccChHHHHHHH------HHhhCCCCcccCCCcHHHHHHHHHHcC
Q 022007 166 NYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAM------CASTEKEPIVVGKPSTFMMEILSKKFQ 239 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~------~~~~~~~~~~~gKP~~~~~~~al~~lg 239 (304)
.++++.+.++.|+++ -...|+||+.. .+.. .......+..+| ..+++.+.. .+
T Consensus 70 ~~pg~~e~L~~L~~~-~~~~i~T~~~~-~~~~---~~~~~~~l~~~f~~~~~~~~i~~~~~~---------------~l- 128 (180)
T 3bwv_A 70 VMPHAQEVVKQLNEH-YDIYIATAAMD-VPTS---FHDKYEWLLEYFPFLDPQHFVFCGRKN---------------II- 128 (180)
T ss_dssp BCTTHHHHHHHHTTT-SEEEEEECC---CCSH---HHHHHHHHHHHCTTSCGGGEEECSCGG---------------GB-
T ss_pred CCcCHHHHHHHHHhc-CCEEEEeCCCC-cchH---HHHHHHHHHHHcCCCCcccEEEeCCcC---------------ee-
Confidence 478899999999873 34588999732 1100 000011111211 122222220 12
Q ss_pred CCCCcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEECCHHHHHHhhh
Q 022007 240 IASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELLG 303 (304)
Q Consensus 240 ~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~~~l~el~~~l~ 303 (304)
++|++|||+ .+|+. +++| ++++|.++.... ..|+++++++.|+..+|.
T Consensus 129 ---~~~l~ieDs-~~~i~--~aaG-~~i~~~~~~~~~---------~~~~~~i~~~~el~~~l~ 176 (180)
T 3bwv_A 129 ---LADYLIDDN-PKQLE--IFEG-KSIMFTASHNVY---------EHRFERVSGWRDVKNYFN 176 (180)
T ss_dssp ---CCSEEEESC-HHHHH--HCSS-EEEEECCGGGTT---------CCSSEEECSHHHHHHHHH
T ss_pred ---cccEEecCC-cchHH--HhCC-CeEEeCCCcccC---------CCCceecCCHHHHHHHHH
Confidence 789999999 88885 5689 999998775421 158999999999988774
No 151
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=97.42 E-value=0.002 Score=65.62 Aligned_cols=43 Identities=23% Similarity=0.194 Sum_probs=38.0
Q ss_pred CCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 37 GDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 37 ~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.+.+-|++.++|++|++.|++++++|+ +.+.......+++|+.
T Consensus 597 ~Dplr~~~~~aI~~l~~aGI~v~miTG---D~~~tA~~ia~~lgi~ 639 (1028)
T 2zxe_A 597 IDPPRAAVPDAVGKCRSAGIKVIMVTG---DHPITAKAIAKGVGII 639 (1028)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTSS
T ss_pred CCCCChhHHHHHHHHHHcCCEEEEECC---CCHHHHHHHHHHcCCC
Confidence 467889999999999999999999999 7888877778888875
No 152
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=97.40 E-value=9.1e-06 Score=65.85 Aligned_cols=32 Identities=6% Similarity=0.111 Sum_probs=27.8
Q ss_pred HHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCe
Q 022007 233 ILSKKFQIASSRMCMVGDRLDTDILFGQNAGCK 265 (304)
Q Consensus 233 ~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ 265 (304)
..++.+|.++++|++|||+ ..++.++.++|+.
T Consensus 115 k~L~~Lg~~~~~~vivdDs-~~~~~~~~~ngi~ 146 (181)
T 2ght_A 115 KDLSRLGRDLRRVLILDNS-PASYVFHPDNAVP 146 (181)
T ss_dssp CCGGGTCSCGGGEEEECSC-GGGGTTCTTSBCC
T ss_pred ccHHHhCCCcceEEEEeCC-HHHhccCcCCEeE
Confidence 3445678899999999999 8999999999976
No 153
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=97.19 E-value=0.00021 Score=60.28 Aligned_cols=50 Identities=18% Similarity=0.207 Sum_probs=42.0
Q ss_pred hccCEEEEeE--EEEcCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHH
Q 022007 23 DSVDAFLFDC--VIWKGDK-LIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKF 76 (304)
Q Consensus 23 ~~~k~i~fDi--tL~~~~~-~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l 76 (304)
.++|+|+||+ ||++.+. +.+.++++|++|+++ ++++++|+ |+...+.+.|
T Consensus 4 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-i~v~iaTG---R~~~~~~~~l 56 (246)
T 2amy_A 4 PGPALCLFDVDGTLTAPRQKITKEMDDFLQKLRQK-IKIGVVGG---SDFEKVQEQL 56 (246)
T ss_dssp CCSEEEEEESBTTTBCTTSCCCHHHHHHHHHHTTT-SEEEEECS---SCHHHHHHHH
T ss_pred CCceEEEEECCCCcCCCCcccCHHHHHHHHHHHhC-CeEEEEcC---CCHHHHHHHh
Confidence 3689999999 9998765 556789999999999 99999999 8877665554
No 154
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=97.15 E-value=0.00045 Score=57.21 Aligned_cols=40 Identities=18% Similarity=0.071 Sum_probs=34.7
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 40 LIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 40 ~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
++||+.+.|+.|+++|++++|+|| .+...+...++.+|++
T Consensus 93 ~~~g~~~~l~~l~~~g~~~~ivS~---~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 93 LTVQAVDVVRGHLAAGDLCALVTA---TNSFVTAPIARAFGVQ 132 (232)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCCC
Confidence 478999999999999999999999 4566667778889986
No 155
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=96.89 E-value=0.0046 Score=50.33 Aligned_cols=89 Identities=22% Similarity=0.226 Sum_probs=62.9
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHHH---------HHHHHHhCCCCCCC
Q 022007 38 DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSFA---------AAMYLKVNNFPQEN 108 (304)
Q Consensus 38 ~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~~---------~~~~l~~~~~~~~~ 108 (304)
..++||+.+.++.|+++|+++.++|| .+.......++.+|+.-.++.++++... ....+...|+.+..
T Consensus 83 ~~~~pg~~~~l~~L~~~g~~~~i~tn---~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e 159 (216)
T 3kbb_A 83 LKENPGVREALEFVKSKRIKLALATS---TPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEK 159 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGG
T ss_pred cccCccHHHHHHHHHHcCCCcccccC---CcHHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccc
Confidence 35789999999999999999999999 5677777888899988666666655321 22344555666544
Q ss_pred eEEEEcChhHHHHHHHcCCcc
Q 022007 109 KVYVIGGEGILEELRQAGYTG 129 (304)
Q Consensus 109 ~v~~~g~~~~~~~l~~~g~~~ 129 (304)
.+++-.+..-....+++|+..
T Consensus 160 ~l~VgDs~~Di~aA~~aG~~~ 180 (216)
T 3kbb_A 160 VVVFEDSKSGVEAAKSAGIER 180 (216)
T ss_dssp EEEEECSHHHHHHHHHTTCCC
T ss_pred eEEEecCHHHHHHHHHcCCcE
Confidence 444433444466777888764
No 156
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=96.69 E-value=0.015 Score=47.42 Aligned_cols=88 Identities=17% Similarity=0.133 Sum_probs=63.3
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechH---------HHHHHHHHhCCCCCCC
Q 022007 38 DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSS---------FAAAMYLKVNNFPQEN 108 (304)
Q Consensus 38 ~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~~ 108 (304)
..++|++.+.|+.|++.|++++++|| .+...+...++.+|+.-..+.++++. ......+...++.+..
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 166 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATS---GGIDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDE 166 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECS---SCHHHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGG
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeC---CchhhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHH
Confidence 35789999999999999999999999 56777788899999886666666552 3344455666765443
Q ss_pred eEEEEcC-hhHHHHHHHcCCcc
Q 022007 109 KVYVIGG-EGILEELRQAGYTG 129 (304)
Q Consensus 109 ~v~~~g~-~~~~~~l~~~g~~~ 129 (304)
++++|- ......++..|+..
T Consensus 167 -~i~iGD~~~Di~~a~~aG~~~ 187 (233)
T 3s6j_A 167 -CLVIGDAIWDMLAARRCKATG 187 (233)
T ss_dssp -EEEEESSHHHHHHHHHTTCEE
T ss_pred -EEEEeCCHHhHHHHHHCCCEE
Confidence 444444 44566778888744
No 157
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=96.66 E-value=0.012 Score=47.32 Aligned_cols=89 Identities=24% Similarity=0.256 Sum_probs=62.7
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechH---------HHHHHHHHhCCCCCCC
Q 022007 38 DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSS---------FAAAMYLKVNNFPQEN 108 (304)
Q Consensus 38 ~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~~ 108 (304)
..++|++.+.++.|+++|++++++|| .+.......++.+|+.-..+.++++. ......++..|+.+..
T Consensus 83 ~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 159 (216)
T 2pib_A 83 LKENPGVREALEFVKSKRIKLALATS---TPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEK 159 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGG
T ss_pred CCcCcCHHHHHHHHHHCCCCEEEEeC---CcHHhHHHHHHhcChHHhcCEEeecccCCCCCcCcHHHHHHHHHcCCCCce
Confidence 46789999999999999999999999 56777778888899875556555542 2334455555665444
Q ss_pred eEEEEcC-hhHHHHHHHcCCccc
Q 022007 109 KVYVIGG-EGILEELRQAGYTGL 130 (304)
Q Consensus 109 ~v~~~g~-~~~~~~l~~~g~~~~ 130 (304)
++++|- ..-.+.++..|+...
T Consensus 160 -~i~iGD~~~Di~~a~~aG~~~i 181 (216)
T 2pib_A 160 -VVVFEDSKSGVEAAKSAGIERI 181 (216)
T ss_dssp -EEEEECSHHHHHHHHHTTCCEE
T ss_pred -EEEEeCcHHHHHHHHHcCCcEE
Confidence 444444 445677788887543
No 158
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=96.55 E-value=0.0041 Score=57.79 Aligned_cols=90 Identities=20% Similarity=0.187 Sum_probs=54.2
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCC---CCcCHHHHHHHHHhCCCccCCCCeechHHH---------HHHHHHhCCCCC
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNN---SRRSRRQYAHKFHSLGVSVSEDEIFSSSFA---------AAMYLKVNNFPQ 106 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~---s~r~~~~~~~~l~~lG~~~~~~~i~~~~~~---------~~~~l~~~~~~~ 106 (304)
.++|++.++|+.|+++|+++.++||+ +......+...+. |+.-.++.++++... ....+...|+.+
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~--~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~~p 177 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC--ELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASP 177 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH--HHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh--hhhhheeEEEeccccCCCCCCHHHHHHHHHHcCCCh
Confidence 35788999999999999999999996 2234444444433 333345666666432 223444556655
Q ss_pred CCeEEEEcChhHHHHHHHcCCccc
Q 022007 107 ENKVYVIGGEGILEELRQAGYTGL 130 (304)
Q Consensus 107 ~~~v~~~g~~~~~~~l~~~g~~~~ 130 (304)
...+++-.+..-....+..|+...
T Consensus 178 ~~~~~v~D~~~di~~a~~aG~~~~ 201 (555)
T 3i28_A 178 SEVVFLDDIGANLKPARDLGMVTI 201 (555)
T ss_dssp GGEEEEESCHHHHHHHHHHTCEEE
T ss_pred hHEEEECCcHHHHHHHHHcCCEEE
Confidence 444444333344566677776543
No 159
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=96.50 E-value=0.0083 Score=48.79 Aligned_cols=88 Identities=17% Similarity=0.156 Sum_probs=60.6
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechH-------HHHHHHHHhCCCCCCCeE
Q 022007 38 DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSS-------FAAAMYLKVNNFPQENKV 110 (304)
Q Consensus 38 ~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~-------~~~~~~l~~~~~~~~~~v 110 (304)
..++||+.+.|+.|++ |+++.++|| .+.......++.+|+.-..+.++++. ......+...|+.+...+
T Consensus 83 ~~~~~g~~~~l~~L~~-~~~l~i~T~---~~~~~~~~~l~~~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~ 158 (210)
T 2ah5_A 83 AQLFPQIIDLLEELSS-SYPLYITTT---KDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAI 158 (210)
T ss_dssp CEECTTHHHHHHHHHT-TSCEEEEEE---EEHHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEE
T ss_pred CCCCCCHHHHHHHHHc-CCeEEEEeC---CCHHHHHHHHHhcCchhheeeeecCCCCCCCChHHHHHHHHHcCCCcccEE
Confidence 3578999999999999 999999999 55666777888999886566666432 223334455676654444
Q ss_pred EEEcChhHHHHHHHcCCcc
Q 022007 111 YVIGGEGILEELRQAGYTG 129 (304)
Q Consensus 111 ~~~g~~~~~~~l~~~g~~~ 129 (304)
++--+..-.+..+.+|+..
T Consensus 159 ~vgDs~~Di~~a~~aG~~~ 177 (210)
T 2ah5_A 159 IIGDTKFDMLGARETGIQK 177 (210)
T ss_dssp EEESSHHHHHHHHHHTCEE
T ss_pred EECCCHHHHHHHHHCCCcE
Confidence 4444444466777888754
No 160
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=96.49 E-value=0.013 Score=47.95 Aligned_cols=90 Identities=21% Similarity=0.259 Sum_probs=63.4
Q ss_pred CCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechH---------HHHHHHHHhCCCCCC
Q 022007 37 GDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSS---------FAAAMYLKVNNFPQE 107 (304)
Q Consensus 37 ~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~ 107 (304)
...+.|++.++|+.|+++|++++++|| .+...+...++.+|+.-..+.++++. ......++..++.+.
T Consensus 101 ~~~~~~~~~~~l~~l~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~ 177 (231)
T 3kzx_A 101 NFMLNDGAIELLDTLKENNITMAIVSN---KNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPS 177 (231)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCS
T ss_pred cceECcCHHHHHHHHHHCCCeEEEEEC---CCHHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcc
Confidence 345789999999999999999999999 56777778888999875555555432 233445556676654
Q ss_pred CeEEEEcC-hhHHHHHHHcCCcc
Q 022007 108 NKVYVIGG-EGILEELRQAGYTG 129 (304)
Q Consensus 108 ~~v~~~g~-~~~~~~l~~~g~~~ 129 (304)
..++++|- ....+.++..|+..
T Consensus 178 ~~~v~vGD~~~Di~~a~~aG~~~ 200 (231)
T 3kzx_A 178 KEVFFIGDSISDIQSAIEAGCLP 200 (231)
T ss_dssp TTEEEEESSHHHHHHHHHTTCEE
T ss_pred cCEEEEcCCHHHHHHHHHCCCeE
Confidence 13544444 45567788888654
No 161
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=96.31 E-value=0.017 Score=47.51 Aligned_cols=87 Identities=25% Similarity=0.197 Sum_probs=59.6
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechH---------HHHHHHHHhCCCCCCCe
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSS---------FAAAMYLKVNNFPQENK 109 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~ 109 (304)
.++|++.+.|+.|+++|++++++|| .+.......++.+|+.-..+.++++. ......+...++.+..
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~- 179 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATS---KVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPER- 179 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECS---SCHHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGG-
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcC---CChHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHH-
Confidence 3688999999999999999999999 55666777788888765455555432 3334455555665433
Q ss_pred EEEEcC-hhHHHHHHHcCCcc
Q 022007 110 VYVIGG-EGILEELRQAGYTG 129 (304)
Q Consensus 110 v~~~g~-~~~~~~l~~~g~~~ 129 (304)
++++|- ..-.+.++..|+..
T Consensus 180 ~i~vGD~~~Di~~a~~aG~~~ 200 (237)
T 4ex6_A 180 CVVIGDGVPDAEMGRAAGMTV 200 (237)
T ss_dssp EEEEESSHHHHHHHHHTTCEE
T ss_pred eEEEcCCHHHHHHHHHCCCeE
Confidence 444444 44566778888754
No 162
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=96.27 E-value=0.02 Score=51.65 Aligned_cols=52 Identities=25% Similarity=0.264 Sum_probs=43.4
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCC--CeechHH
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSED--EIFSSSF 93 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~--~i~~~~~ 93 (304)
.++||+.++|+.|+++|++++++|| .+...+...|+.+|+.-.++ .++++..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn---~~~~~~~~~L~~lgL~~~Fd~~~Ivs~dd 268 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATG---RPYTETVVPFENLGLLPYFEADFIATASD 268 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCGGGSCGGGEECHHH
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeC---CcHHHHHHHHHHcCChHhcCCCEEEeccc
Confidence 5789999999999999999999999 56777778888899875556 6777544
No 163
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=96.23 E-value=0.019 Score=45.85 Aligned_cols=89 Identities=13% Similarity=0.126 Sum_probs=60.2
Q ss_pred cCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHH---------HHHHHHHhCCCCC
Q 022007 36 KGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSF---------AAAMYLKVNNFPQ 106 (304)
Q Consensus 36 ~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~---------~~~~~l~~~~~~~ 106 (304)
....++|++.+.|+.|+++| +++++|| .+.......++.+|+.-..+.++++.. .....+...++.+
T Consensus 83 ~~~~~~~~~~~~l~~l~~~g-~~~i~s~---~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 158 (200)
T 3cnh_A 83 EQSQPRPEVLALARDLGQRY-RMYSLNN---EGRDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRP 158 (200)
T ss_dssp HTCCBCHHHHHHHHHHTTTS-EEEEEEC---CCHHHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCG
T ss_pred hcCccCccHHHHHHHHHHcC-CEEEEeC---CcHHHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCH
Confidence 34458899999999999999 9999999 466667777888888766677776543 2223444455544
Q ss_pred CCeEEEEc-ChhHHHHHHHcCCcc
Q 022007 107 ENKVYVIG-GEGILEELRQAGYTG 129 (304)
Q Consensus 107 ~~~v~~~g-~~~~~~~l~~~g~~~ 129 (304)
. .++++| +..-.+..+..|+..
T Consensus 159 ~-~~~~vgD~~~Di~~a~~aG~~~ 181 (200)
T 3cnh_A 159 E-EAVMVDDRLQNVQAARAVGMHA 181 (200)
T ss_dssp G-GEEEEESCHHHHHHHHHTTCEE
T ss_pred H-HeEEeCCCHHHHHHHHHCCCEE
Confidence 3 344444 334466677777654
No 164
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=96.06 E-value=0.022 Score=48.09 Aligned_cols=87 Identities=21% Similarity=0.305 Sum_probs=60.7
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHHH---------HHHHHHhCCCCCCCe
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSFA---------AAMYLKVNNFPQENK 109 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~~---------~~~~l~~~~~~~~~~ 109 (304)
.++||+.++|+.|+++|++++++||.. + .+...++.+|+.-..+.++++... ....+...++.+. .
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~-~---~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~-~ 180 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFD-R---RLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPV-V 180 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCC-T---THHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGG-G
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCc-H---HHHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHH-H
Confidence 479999999999999999999999933 2 246778889988667777776433 2334445566543 3
Q ss_pred EEEEcCh--hHHHHHHHcCCccc
Q 022007 110 VYVIGGE--GILEELRQAGYTGL 130 (304)
Q Consensus 110 v~~~g~~--~~~~~l~~~g~~~~ 130 (304)
++++|-. .-.+..+.+|+...
T Consensus 181 ~~~vGD~~~~Di~~a~~aG~~~i 203 (263)
T 3k1z_A 181 AAHVGDNYLCDYQGPRAVGMHSF 203 (263)
T ss_dssp EEEEESCHHHHTHHHHTTTCEEE
T ss_pred EEEECCCcHHHHHHHHHCCCEEE
Confidence 5555544 44677788887653
No 165
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=96.03 E-value=0.025 Score=45.92 Aligned_cols=88 Identities=16% Similarity=0.194 Sum_probs=62.1
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeech---------HHHHHHHHHhCCCCCCC
Q 022007 38 DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSS---------SFAAAMYLKVNNFPQEN 108 (304)
Q Consensus 38 ~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~---------~~~~~~~l~~~~~~~~~ 108 (304)
..++|++.++|+.|+++|+++.++|| .+.......++.+|+.-..+.++++ .......+...|+.+.
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~- 160 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATS---KPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSD- 160 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEE---EEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGG-
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcc-
Confidence 35889999999999999999999999 5667777788889987555555432 3334445555676544
Q ss_pred eEEEEcCh-hHHHHHHHcCCcc
Q 022007 109 KVYVIGGE-GILEELRQAGYTG 129 (304)
Q Consensus 109 ~v~~~g~~-~~~~~l~~~g~~~ 129 (304)
.++++|-. .-.+.++.+|+..
T Consensus 161 ~~i~iGD~~~Di~~a~~aG~~~ 182 (226)
T 3mc1_A 161 DAIMIGDREYDVIGALKNNLPS 182 (226)
T ss_dssp GEEEEESSHHHHHHHHTTTCCE
T ss_pred cEEEECCCHHHHHHHHHCCCCE
Confidence 45555543 4466778888754
No 166
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=95.98 E-value=0.01 Score=51.42 Aligned_cols=43 Identities=14% Similarity=0.169 Sum_probs=32.1
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCcc
Q 022007 38 DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSV 83 (304)
Q Consensus 38 ~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~ 83 (304)
..+-||+.++++.|++.|++++++|++ ....+...++++|++.
T Consensus 140 i~l~~g~~e~i~~l~~~gi~v~ivSgg---~~~~i~~i~~~~g~~~ 182 (297)
T 4fe3_A 140 VMLKEGYENFFGKLQQHGIPVFIFSAG---IGDVLEEVIRQAGVYH 182 (297)
T ss_dssp CCBCBTHHHHHHHHHHTTCCEEEEEEE---EHHHHHHHHHHTTCCC
T ss_pred CCCCCcHHHHHHHHHHcCCeEEEEeCC---cHHHHHHHHHHcCCCc
Confidence 457889999999999999999999983 3344444555566643
No 167
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=95.96 E-value=0.031 Score=46.64 Aligned_cols=120 Identities=10% Similarity=0.053 Sum_probs=74.8
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHHH---------HHHHHHhCCCCCCCe
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSFA---------AAMYLKVNNFPQENK 109 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~~---------~~~~l~~~~~~~~~~ 109 (304)
.++||+.+.++.|+++|+++.++||. .+ ....|+.+|+.-..+.++++... ....++..|+.+...
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~-~~----~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~ 169 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVS-LN----APTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQAC 169 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC-TT----HHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGE
T ss_pred cccccHHHHHHhhhcccccceecccc-cc----hhhhhhhhhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHE
Confidence 36899999999999999999999983 22 23457788887666666655332 223445556666555
Q ss_pred EEEEcChhHHHHHHHcCCcccCCCCCcchhhhhccccccccCCCccEEEEecCCCCCHHHHHHHHHHHHc
Q 022007 110 VYVIGGEGILEELRQAGYTGLGGPEDGEKRVQLKSNCLFEHDKNVGAVVVGLDPHINYYKLQYGTLCIRE 179 (304)
Q Consensus 110 v~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~l~~ 179 (304)
+++-.+..-.+..+++|+..+..... ....+ .+......+.++.+.+..+.+.+
T Consensus 170 l~VgDs~~di~aA~~aG~~~I~V~~g---------------~~~ad-~~~~~~~~l~~~~l~~~~~~l~~ 223 (243)
T 4g9b_A 170 IGIEDAQAGIDAINASGMRSVGIGAG---------------LTGAQ-LLLPSTESLTWPRLSAFWQNVAE 223 (243)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEESTT---------------CCSCS-EEESSGGGCCHHHHHHHHHHHSC
T ss_pred EEEcCCHHHHHHHHHcCCEEEEECCC---------------CCcHH-HhcCChhhcCHHHHHHHHHHHHH
Confidence 55544555567778888876422110 01112 22233345678888888777765
No 168
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=95.90 E-value=0.036 Score=45.29 Aligned_cols=85 Identities=13% Similarity=0.177 Sum_probs=56.7
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHH---------HHHHHHHhCCCCCCCeE
Q 022007 40 LIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSF---------AAAMYLKVNNFPQENKV 110 (304)
Q Consensus 40 ~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~---------~~~~~l~~~~~~~~~~v 110 (304)
++|++.++|+.|+++|+++.++||+. + ....++.+|+.-..+.++++.. .....+...|+.+.. +
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~-~----~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~-~ 166 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSR-N----APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPAD-C 166 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCT-T----HHHHHHHTTCTTTCSEECCC---------CCHHHHHHHHHTSCGGG-E
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCch-h----HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHH-E
Confidence 79999999999999999999999952 2 5566788888755555554422 223344455665433 4
Q ss_pred EEEcC-hhHHHHHHHcCCccc
Q 022007 111 YVIGG-EGILEELRQAGYTGL 130 (304)
Q Consensus 111 ~~~g~-~~~~~~l~~~g~~~~ 130 (304)
+++|- ..-.+.++..|+...
T Consensus 167 i~vGDs~~Di~~a~~aG~~~~ 187 (233)
T 3nas_A 167 AAIEDAEAGISAIKSAGMFAV 187 (233)
T ss_dssp EEEECSHHHHHHHHHTTCEEE
T ss_pred EEEeCCHHHHHHHHHcCCEEE
Confidence 44444 445677788887654
No 169
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=95.81 E-value=0.047 Score=44.58 Aligned_cols=88 Identities=18% Similarity=0.184 Sum_probs=62.6
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeech---------HHHHHHHHHhCCCCCCC
Q 022007 38 DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSS---------SFAAAMYLKVNNFPQEN 108 (304)
Q Consensus 38 ~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~---------~~~~~~~l~~~~~~~~~ 108 (304)
..++|++.++|+.|+ +|++++++|| .+.......++.+|+.-..+.++++ .......++..|+.+.
T Consensus 106 ~~~~~~~~~~l~~l~-~g~~~~i~sn---~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~- 180 (240)
T 3qnm_A 106 SGLMPHAKEVLEYLA-PQYNLYILSN---GFRELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELR- 180 (240)
T ss_dssp CCBSTTHHHHHHHHT-TTSEEEEEEC---SCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGG-
T ss_pred CCcCccHHHHHHHHH-cCCeEEEEeC---CchHHHHHHHHHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCcc-
Confidence 457999999999999 9999999999 4666777788888887555666544 2334445566676543
Q ss_pred eEEEEcCh--hHHHHHHHcCCccc
Q 022007 109 KVYVIGGE--GILEELRQAGYTGL 130 (304)
Q Consensus 109 ~v~~~g~~--~~~~~l~~~g~~~~ 130 (304)
.++++|-. ...+.++..|+...
T Consensus 181 ~~~~iGD~~~~Di~~a~~aG~~~~ 204 (240)
T 3qnm_A 181 ESLMIGDSWEADITGAHGVGMHQA 204 (240)
T ss_dssp GEEEEESCTTTTHHHHHHTTCEEE
T ss_pred cEEEECCCchHhHHHHHHcCCeEE
Confidence 35555544 56788888887653
No 170
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=95.74 E-value=0.0069 Score=60.56 Aligned_cols=44 Identities=14% Similarity=0.027 Sum_probs=36.7
Q ss_pred cCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 36 KGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 36 ~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
-.+.+-|++.++|++|++.|++++++|+ -.+.......+++|+.
T Consensus 485 i~Dp~R~~a~~aI~~l~~aGI~v~MiTG---D~~~tA~~iA~~lGi~ 528 (885)
T 3b8c_A 485 LFDPPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMG 528 (885)
T ss_dssp ECCCCCHHHHHHHHHHHHTTCCCEEEES---SCHHHHTHHHHTTTCT
T ss_pred eecccchhHHHHHHHHHHcCCcEEEEcC---CChHHHHHHHHHhCCc
Confidence 4567788999999999999999999999 5666666667778885
No 171
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=95.66 E-value=0.085 Score=42.81 Aligned_cols=91 Identities=14% Similarity=0.173 Sum_probs=62.5
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHHH---------HHHHHHhCCCCCCCe
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSFA---------AAMYLKVNNFPQENK 109 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~~---------~~~~l~~~~~~~~~~ 109 (304)
.+.|++.+.|+.|+++|+++.++||....+.......++.+|+.-..+.++++... ....++..|+.+ ..
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~-~~ 177 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKP-EE 177 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCG-GG
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCc-cc
Confidence 46899999999999999999999994312266666778889987556666655322 233445566654 34
Q ss_pred EEEEcCh--hHHHHHHHcCCccc
Q 022007 110 VYVIGGE--GILEELRQAGYTGL 130 (304)
Q Consensus 110 v~~~g~~--~~~~~l~~~g~~~~ 130 (304)
++++|-. ...+.++.+|+...
T Consensus 178 ~~~iGD~~~nDi~~a~~aG~~~~ 200 (235)
T 2om6_A 178 SLHIGDTYAEDYQGARKVGMWAV 200 (235)
T ss_dssp EEEEESCTTTTHHHHHHTTSEEE
T ss_pred eEEECCChHHHHHHHHHCCCEEE
Confidence 5555544 35777888887653
No 172
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=95.63 E-value=0.082 Score=44.68 Aligned_cols=88 Identities=11% Similarity=0.047 Sum_probs=55.6
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHh---CCCccCCCCeech---H----HHHHHHHHhCCCCCCC
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHS---LGVSVSEDEIFSS---S----FAAAMYLKVNNFPQEN 108 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~---lG~~~~~~~i~~~---~----~~~~~~l~~~~~~~~~ 108 (304)
.++||+.++|+.|+++|+++.++||+ +.......|+. .|+.-.++.++++ . ......++..++.+..
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~---~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~KP~p~~~~~~~~~lg~~p~~ 206 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSG---SVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNN 206 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGG
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCC---CHHHHHHHHHhhcccChHhhccEEEecCCCCCCCHHHHHHHHHHhCcCccc
Confidence 58999999999999999999999993 44444555664 3566555666654 1 1122233445665544
Q ss_pred eEEEEcChhHHHHHHHcCCcc
Q 022007 109 KVYVIGGEGILEELRQAGYTG 129 (304)
Q Consensus 109 ~v~~~g~~~~~~~l~~~g~~~ 129 (304)
.+++--+..-....+++|+..
T Consensus 207 ~l~VgDs~~di~aA~~aG~~~ 227 (261)
T 1yns_A 207 ILFLTDVTREASAAEEADVHV 227 (261)
T ss_dssp EEEEESCHHHHHHHHHTTCEE
T ss_pred EEEEcCCHHHHHHHHHCCCEE
Confidence 444433444456667778654
No 173
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=95.62 E-value=0.019 Score=49.66 Aligned_cols=103 Identities=14% Similarity=0.130 Sum_probs=60.7
Q ss_pred CEEEEeE--EEEcC-Cc------------cCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHh--------CCCc
Q 022007 26 DAFLFDC--VIWKG-DK------------LIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHS--------LGVS 82 (304)
Q Consensus 26 k~i~fDi--tL~~~-~~------------~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~--------lG~~ 82 (304)
+.+++|+ |+... .+ ++||+.++|+.|+++|++++++||..........+.|+. +|+.
T Consensus 160 ~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~ 239 (301)
T 1ltq_A 160 KAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP 239 (301)
T ss_dssp EEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC
T ss_pred ceEEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC
Confidence 5788998 65432 22 489999999999999999999999554434344455555 6773
Q ss_pred cCCCCeech-------HH-HHHHHHHhCCCCCCCeEEEEc-ChhHHHHHHHcCCccc
Q 022007 83 VSEDEIFSS-------SF-AAAMYLKVNNFPQENKVYVIG-GEGILEELRQAGYTGL 130 (304)
Q Consensus 83 ~~~~~i~~~-------~~-~~~~~l~~~~~~~~~~v~~~g-~~~~~~~l~~~g~~~~ 130 (304)
.+.++.. .. .....+...+..+...++++| +....+..+++|+...
T Consensus 240 --~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~ 294 (301)
T 1ltq_A 240 --LVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECW 294 (301)
T ss_dssp --CSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEE
T ss_pred --chheeeccCCCCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEE
Confidence 3333321 11 111222333322212234444 4455777788887653
No 174
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=95.58 E-value=0.025 Score=47.29 Aligned_cols=86 Identities=23% Similarity=0.188 Sum_probs=58.8
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCC-eechH----------HHHHHHHHhCCCCCCC
Q 022007 40 LIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDE-IFSSS----------FAAAMYLKVNNFPQEN 108 (304)
Q Consensus 40 ~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~-i~~~~----------~~~~~~l~~~~~~~~~ 108 (304)
++|++.++|+.|+++|+++.++|| .+.......++.+|+.-..+. ++++. ......+...++.+..
T Consensus 111 ~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~ 187 (259)
T 4eek_A 111 AIEGAAETLRALRAAGVPFAIGSN---SERGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPER 187 (259)
T ss_dssp ECTTHHHHHHHHHHHTCCEEEECS---SCHHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGG
T ss_pred cCccHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHH
Confidence 578899999999999999999999 566677778888888643444 44432 2234455666665433
Q ss_pred eEEEEcC-hhHHHHHHHcCCcc
Q 022007 109 KVYVIGG-EGILEELRQAGYTG 129 (304)
Q Consensus 109 ~v~~~g~-~~~~~~l~~~g~~~ 129 (304)
++++|- ....+.++..|+..
T Consensus 188 -~i~iGD~~~Di~~a~~aG~~~ 208 (259)
T 4eek_A 188 -CVVIEDSVTGGAAGLAAGATL 208 (259)
T ss_dssp -EEEEESSHHHHHHHHHHTCEE
T ss_pred -EEEEcCCHHHHHHHHHCCCEE
Confidence 444444 44466777788763
No 175
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=95.55 E-value=0.0018 Score=54.43 Aligned_cols=44 Identities=7% Similarity=-0.002 Sum_probs=33.5
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcC----CchhhHHHHHHcCCeEEEEccCCCCc
Q 022007 227 STFMMEILSKKFQIASSRMCMVGD----RLDTDILFGQNAGCKTLLVLSGVTTQ 276 (304)
Q Consensus 227 ~~~~~~~al~~lg~~~~~~~~IGD----~~~~Di~~a~~aG~~ti~V~~G~~~~ 276 (304)
+..+++.+ +|++++++++||| + .||++|.+.+|.- ++.+|++.+
T Consensus 189 Kg~al~~l---~~i~~~~viafGD~~~~~-~ND~~Ml~~a~~a--g~av~Na~~ 236 (246)
T 2amy_A 189 KRYCLRHV---ENDGYKTIYFFGDKTMPG-GNDHEIFTDPRTM--GYSVTAPED 236 (246)
T ss_dssp GGGGGGGT---TTSCCSEEEEEECSCC----CCCHHHHCTTEE--EEECSSHHH
T ss_pred hHHHHHHH---hCCCHHHEEEECCCCCCC-CCcHHHHHhCCcc--eEEeeCCCH
Confidence 45566666 8999999999999 9 9999999999822 677777653
No 176
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=95.50 E-value=0.05 Score=44.75 Aligned_cols=86 Identities=16% Similarity=0.156 Sum_probs=54.0
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCC--CCeechH---------HHHHHHHHhCCCCCC
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSE--DEIFSSS---------FAAAMYLKVNNFPQE 107 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~--~~i~~~~---------~~~~~~l~~~~~~~~ 107 (304)
.++|++.++|+.|+++|++++++||+ +...+...++. |+.-.. +.++++. ......+...|+.+.
T Consensus 108 ~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~ 183 (247)
T 3dv9_A 108 ERMPGALEVLTKIKSEGLTPMVVTGS---GQTSLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPN 183 (247)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSC---C---CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGG
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEcCC---chHHHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChh
Confidence 46789999999999999999999994 34444555666 665444 4455442 223344555566543
Q ss_pred CeEEEEcC-hhHHHHHHHcCCcc
Q 022007 108 NKVYVIGG-EGILEELRQAGYTG 129 (304)
Q Consensus 108 ~~v~~~g~-~~~~~~l~~~g~~~ 129 (304)
. ++++|- ..-.+.++..|+..
T Consensus 184 ~-~i~vGD~~~Di~~a~~aG~~~ 205 (247)
T 3dv9_A 184 E-ALVIENAPLGVQAGVAAGIFT 205 (247)
T ss_dssp G-EEEEECSHHHHHHHHHTTSEE
T ss_pred h-eEEEeCCHHHHHHHHHCCCeE
Confidence 3 444444 44566778888654
No 177
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=95.45 E-value=0.074 Score=45.10 Aligned_cols=85 Identities=25% Similarity=0.214 Sum_probs=59.2
Q ss_pred cCccHHHHHHHHHHCCC--cEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeech-------------HHHHHHHHHhCCC
Q 022007 40 LIDGVRQTLDVLRSKGK--KLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSS-------------SFAAAMYLKVNNF 104 (304)
Q Consensus 40 ~~~~a~eal~~L~~~G~--~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~-------------~~~~~~~l~~~~~ 104 (304)
++|++.++|+.|+++|+ ++.++|| .+.......++.+|+.-..+.++++ .......+...|+
T Consensus 143 ~~p~~~~~L~~L~~~g~~~~l~i~Tn---~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi 219 (282)
T 3nuq_A 143 PDIPLRNMLLRLRQSGKIDKLWLFTN---AYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGL 219 (282)
T ss_dssp CCHHHHHHHHHHHHSSSCSEEEEECS---SCHHHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHTC
T ss_pred cChhHHHHHHHHHhCCCCceEEEEEC---CChHHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHcCC
Confidence 58899999999999999 9999999 4566677778888887555555532 2333445555676
Q ss_pred CC-CCeEEEEc-ChhHHHHHHHcCCc
Q 022007 105 PQ-ENKVYVIG-GEGILEELRQAGYT 128 (304)
Q Consensus 105 ~~-~~~v~~~g-~~~~~~~l~~~g~~ 128 (304)
.+ .. ++++| +..-...++.+|+.
T Consensus 220 ~~~~~-~i~vGD~~~Di~~a~~aG~~ 244 (282)
T 3nuq_A 220 ARYEN-AYFIDDSGKNIETGIKLGMK 244 (282)
T ss_dssp CCGGG-EEEEESCHHHHHHHHHHTCS
T ss_pred CCccc-EEEEcCCHHHHHHHHHCCCe
Confidence 54 34 44444 44556778888883
No 178
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=95.38 E-value=0.058 Score=44.72 Aligned_cols=87 Identities=17% Similarity=0.111 Sum_probs=55.8
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHh-CCCccCCCCeechH-----------HHHHHHHHhCCCCC-
Q 022007 40 LIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHS-LGVSVSEDEIFSSS-----------FAAAMYLKVNNFPQ- 106 (304)
Q Consensus 40 ~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~-lG~~~~~~~i~~~~-----------~~~~~~l~~~~~~~- 106 (304)
++|++.++|+.|+++|+++.++|| .+...+...+.+ +|+.-..+.++++. ......+...++.+
T Consensus 113 ~~~~~~~~l~~l~~~g~~~~i~sn---~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~ 189 (250)
T 3l5k_A 113 LMPGAEKLIIHLRKHGIPFALATS---SRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPA 189 (250)
T ss_dssp BCTTHHHHHHHHHHTTCCEEEECS---CCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCCC
T ss_pred CCCCHHHHHHHHHhCCCcEEEEeC---CCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCCC
Confidence 678999999999999999999999 455555555544 45543334444332 23444556666653
Q ss_pred -CCeEEEEcC-hhHHHHHHHcCCccc
Q 022007 107 -ENKVYVIGG-EGILEELRQAGYTGL 130 (304)
Q Consensus 107 -~~~v~~~g~-~~~~~~l~~~g~~~~ 130 (304)
.. ++++|- ..-.+.++.+|+...
T Consensus 190 ~~~-~i~iGD~~~Di~~a~~aG~~~i 214 (250)
T 3l5k_A 190 MEK-CLVFEDAPNGVEAALAAGMQVV 214 (250)
T ss_dssp GGG-EEEEESSHHHHHHHHHTTCEEE
T ss_pred cce-EEEEeCCHHHHHHHHHcCCEEE
Confidence 33 454444 455677888887543
No 179
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=95.37 E-value=0.054 Score=45.69 Aligned_cols=85 Identities=20% Similarity=0.191 Sum_probs=59.7
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHH---------HHHHHHHhCCCCCCC
Q 022007 38 DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSF---------AAAMYLKVNNFPQEN 108 (304)
Q Consensus 38 ~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~---------~~~~~l~~~~~~~~~ 108 (304)
-.++||+.++|+.|++ +++++++|| .+.......++.+|+.-..+.++++.. .....+...++.+.
T Consensus 120 ~~~~~g~~~~L~~L~~-~~~l~i~Tn---~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~- 194 (260)
T 2gfh_A 120 MILADDVKAMLTELRK-EVRLLLLTN---GDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPG- 194 (260)
T ss_dssp CCCCHHHHHHHHHHHT-TSEEEEEEC---SCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGG-
T ss_pred CCCCcCHHHHHHHHHc-CCcEEEEEC---cChHHHHHHHHhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChh-
Confidence 4678999999999997 599999999 456666777888998765666665432 22334445566543
Q ss_pred eEEEEcC--hhHHHHHHHcCC
Q 022007 109 KVYVIGG--EGILEELRQAGY 127 (304)
Q Consensus 109 ~v~~~g~--~~~~~~l~~~g~ 127 (304)
.++++|- ..-....+.+|+
T Consensus 195 ~~~~vGDs~~~Di~~A~~aG~ 215 (260)
T 2gfh_A 195 DCVMVGDTLETDIQGGLNAGL 215 (260)
T ss_dssp GEEEEESCTTTHHHHHHHTTC
T ss_pred hEEEECCCchhhHHHHHHCCC
Confidence 4556665 355677788887
No 180
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=95.27 E-value=0.059 Score=44.46 Aligned_cols=87 Identities=15% Similarity=0.141 Sum_probs=56.1
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCC--CCeechH---------HHHHHHHHhCCCCCC
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSE--DEIFSSS---------FAAAMYLKVNNFPQE 107 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~--~~i~~~~---------~~~~~~l~~~~~~~~ 107 (304)
.++|++.++|+.|+++|+++.++||+ +...+...++. |+.-.. +.++++. ......+...++.+.
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~ 184 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGS---GQLSLLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKAD 184 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCC---CCHHHHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGG
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCC---cHHHHHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHH
Confidence 46789999999999999999999993 44445555666 665444 4444432 234445566676554
Q ss_pred CeEEEEcChhHHHHHHHcCCcc
Q 022007 108 NKVYVIGGEGILEELRQAGYTG 129 (304)
Q Consensus 108 ~~v~~~g~~~~~~~l~~~g~~~ 129 (304)
..+++-.+..-.+.++.+|+..
T Consensus 185 ~~i~vGD~~~Di~~a~~aG~~~ 206 (243)
T 3qxg_A 185 EAVVIENAPLGVEAGHKAGIFT 206 (243)
T ss_dssp GEEEEECSHHHHHHHHHTTCEE
T ss_pred HeEEEeCCHHHHHHHHHCCCEE
Confidence 4344433344566778888754
No 181
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=95.23 E-value=0.042 Score=44.17 Aligned_cols=87 Identities=11% Similarity=0.157 Sum_probs=58.2
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHh------CCCccCCCCeechHH---------HHHHHHHhCC
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHS------LGVSVSEDEIFSSSF---------AAAMYLKVNN 103 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~------lG~~~~~~~i~~~~~---------~~~~~l~~~~ 103 (304)
.++|++.++|+.|++ |++++++|| .+.......++. +|+.-..+.++++.. .....+...+
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~---~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~ 164 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSN---TNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSG 164 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEEC---CCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHC
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeC---CCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhC
Confidence 467899999999999 999999999 455666666776 687755666766533 2233445556
Q ss_pred CCCCCeEEEEcC-hhHHHHHHHcCCccc
Q 022007 104 FPQENKVYVIGG-EGILEELRQAGYTGL 130 (304)
Q Consensus 104 ~~~~~~v~~~g~-~~~~~~l~~~g~~~~ 130 (304)
+.+. .++++|- ..-.+.++..|+...
T Consensus 165 ~~~~-~~~~igD~~~Di~~a~~aG~~~~ 191 (211)
T 2i6x_A 165 MKPE-ETLFIDDGPANVATAERLGFHTY 191 (211)
T ss_dssp CCGG-GEEEECSCHHHHHHHHHTTCEEE
T ss_pred CChH-HeEEeCCCHHHHHHHHHcCCEEE
Confidence 6543 4555553 344667777887653
No 182
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=95.16 E-value=0.14 Score=41.55 Aligned_cols=86 Identities=21% Similarity=0.241 Sum_probs=61.4
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechH---------HHHHHHHHhCC-CCCCC
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSS---------FAAAMYLKVNN-FPQEN 108 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~-~~~~~ 108 (304)
.++|++.++|+.|+++ ++++++|| .+.......++.+|+.-..+.++++. ......+...| +.+ .
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~-~ 177 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTN---GVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSA-E 177 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEEC---SCHHHHHHHHHHTTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCG-G
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeC---CCHHHHHHHHHHcChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCCh-h
Confidence 5789999999999999 99999999 55677777888899875556665432 23334555666 654 3
Q ss_pred eEEEEcCh--hHHHHHHHcCCcc
Q 022007 109 KVYVIGGE--GILEELRQAGYTG 129 (304)
Q Consensus 109 ~v~~~g~~--~~~~~l~~~g~~~ 129 (304)
.++++|-. .-.+.++..|+..
T Consensus 178 ~~i~vGD~~~~Di~~a~~aG~~~ 200 (238)
T 3ed5_A 178 HTLIIGDSLTADIKGGQLAGLDT 200 (238)
T ss_dssp GEEEEESCTTTTHHHHHHTTCEE
T ss_pred HeEEECCCcHHHHHHHHHCCCEE
Confidence 45555554 4577888888754
No 183
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.07 E-value=0.045 Score=44.34 Aligned_cols=88 Identities=22% Similarity=0.304 Sum_probs=61.7
Q ss_pred ccCccHHHHHHHHHHCC-CcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeech----HHHHHHHHHhCCCCCCCeEEEE
Q 022007 39 KLIDGVRQTLDVLRSKG-KKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSS----SFAAAMYLKVNNFPQENKVYVI 113 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G-~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~----~~~~~~~l~~~~~~~~~~v~~~ 113 (304)
.++|++.++++.|+++| ++++++|| .+.......++.+|+.-..+.++++ .......+...|+.+. .++++
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~---~~~~~~~~~l~~~~~~~~f~~~~~~~kpk~~~~~~~~~~lgi~~~-~~i~i 180 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATK---GDLLDQENKLERSGLSPYFDHIEVMSDKTEKEYLRLLSILQIAPS-ELLMV 180 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEE---SCHHHHHHHHHHHTCGGGCSEEEEESCCSHHHHHHHHHHHTCCGG-GEEEE
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeC---CchHHHHHHHHHhCcHhhhheeeecCCCCHHHHHHHHHHhCCCcc-eEEEE
Confidence 57899999999999999 99999998 5666677788888887555666643 3334445555566543 35555
Q ss_pred cCh--hHHHHHHHcCCccc
Q 022007 114 GGE--GILEELRQAGYTGL 130 (304)
Q Consensus 114 g~~--~~~~~l~~~g~~~~ 130 (304)
|-. ...+.++.+|+...
T Consensus 181 GD~~~~Di~~a~~aG~~~v 199 (234)
T 3ddh_A 181 GNSFKSDIQPVLSLGGYGV 199 (234)
T ss_dssp ESCCCCCCHHHHHHTCEEE
T ss_pred CCCcHHHhHHHHHCCCeEE
Confidence 544 45677777787653
No 184
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=94.89 E-value=0.1 Score=43.65 Aligned_cols=88 Identities=17% Similarity=0.008 Sum_probs=55.6
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccC-CCCeechH---------HHHHHHHHhCCCCCCC
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVS-EDEIFSSS---------FAAAMYLKVNNFPQEN 108 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~-~~~i~~~~---------~~~~~~l~~~~~~~~~ 108 (304)
.++|++.++|+.|+++|++++++|| .+.......++.+|+.-. .+.++++. ......+...|+.+..
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 187 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTG---YGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVN 187 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGG
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeC---CchHHHHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCc
Confidence 5789999999999999999999999 455555566666664422 34444331 2333445555665412
Q ss_pred eEEEEcC-hhHHHHHHHcCCcc
Q 022007 109 KVYVIGG-EGILEELRQAGYTG 129 (304)
Q Consensus 109 ~v~~~g~-~~~~~~l~~~g~~~ 129 (304)
.++++|- ....+.++..|+..
T Consensus 188 ~~i~vGD~~~Di~~a~~aG~~~ 209 (277)
T 3iru_A 188 GCIKVDDTLPGIEEGLRAGMWT 209 (277)
T ss_dssp GEEEEESSHHHHHHHHHTTCEE
T ss_pred cEEEEcCCHHHHHHHHHCCCeE
Confidence 3555554 34456677778653
No 185
>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A
Probab=94.86 E-value=0.066 Score=49.27 Aligned_cols=42 Identities=19% Similarity=0.351 Sum_probs=35.5
Q ss_pred HHHHHHHcCCCCCcEEEEcCCchhhHHHHHH-cCCeEEEEccC
Q 022007 231 MEILSKKFQIASSRMCMVGDRLDTDILFGQN-AGCKTLLVLSG 272 (304)
Q Consensus 231 ~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~-aG~~ti~V~~G 272 (304)
...+.+.+|..-.++++|||++..||..++. .||+|++|..-
T Consensus 284 ~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E 326 (470)
T 4g63_A 284 AKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE 326 (470)
T ss_dssp HHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTT
T ss_pred HHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHH
Confidence 4567777888888999999999999988875 69999999553
No 186
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=94.84 E-value=0.048 Score=43.82 Aligned_cols=88 Identities=17% Similarity=0.143 Sum_probs=59.8
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechH---------HHHHHHHHhCCCCCCC
Q 022007 38 DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSS---------FAAAMYLKVNNFPQEN 108 (304)
Q Consensus 38 ~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~~ 108 (304)
..++|++.+.|+.|+++ +++.++|| .+.......++.+|+.-..+.++++. ......+...++.+.
T Consensus 82 ~~~~~~~~~~l~~l~~~-~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~- 156 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSE-LRLGIVTS---QRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQ- 156 (209)
T ss_dssp CEECTTHHHHHHHSCTT-SEEEEECS---SCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGG-
T ss_pred CCcCCCHHHHHHHHHhc-CcEEEEeC---CCHHHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcc-
Confidence 35789999999999999 99999999 46667777888888764444444432 233345566666543
Q ss_pred eEEEEcC-hhHHHHHHHcCCccc
Q 022007 109 KVYVIGG-EGILEELRQAGYTGL 130 (304)
Q Consensus 109 ~v~~~g~-~~~~~~l~~~g~~~~ 130 (304)
.++++|- ..-.+.++..|+...
T Consensus 157 ~~i~vGD~~~Di~~a~~aG~~~~ 179 (209)
T 2hdo_A 157 NALFIGDSVSDEQTAQAANVDFG 179 (209)
T ss_dssp GEEEEESSHHHHHHHHHHTCEEE
T ss_pred cEEEECCChhhHHHHHHcCCeEE
Confidence 4555554 445667788887653
No 187
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=94.84 E-value=0.03 Score=45.74 Aligned_cols=41 Identities=17% Similarity=0.361 Sum_probs=35.6
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++||+.++|+.|+++|++++++|| .+.......++.+|+.
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~---~~~~~~~~~l~~~gl~ 126 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISG---GFRSIVEHVASKLNIP 126 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCC
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeC---ChHHHHHHHHHHcCCC
Confidence 4678999999999999999999999 5667777788888885
No 188
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=94.67 E-value=0.12 Score=51.74 Aligned_cols=50 Identities=16% Similarity=0.117 Sum_probs=38.8
Q ss_pred CcEEEEcCCchhhHHHHHHcCCeEEEEccCCCCccccCCCCCCCCCcEEE--CCHHHHHHhh
Q 022007 243 SRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYT--NQVSDILELL 302 (304)
Q Consensus 243 ~~~~~IGD~~~~Di~~a~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~v~--~~l~el~~~l 302 (304)
+.++|+||+ .||..|.++|+ ++|++|.++..... .+|+++ +++..+.+.+
T Consensus 627 ~~Vam~GDG-vNDapaLk~Ad---vGIAmg~gtd~ak~------aADiVl~~~~~~~I~~ai 678 (920)
T 1mhs_A 627 YLVAMTGDG-VNDAPSLKKAD---TGIAVEGSSDAARS------AADIVFLAPGLGAIIDAL 678 (920)
T ss_dssp CCCEECCCC-GGGHHHHHHSS---EEEEETTSCHHHHH------SSSEEESSCCSHHHHHHH
T ss_pred CeEEEEcCC-cccHHHHHhCC---cCcccccccHHHHH------hcCeEEcCCCHHHHHHHH
Confidence 689999999 89999999999 99999976533222 588887 4566666544
No 189
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=94.65 E-value=0.0088 Score=48.06 Aligned_cols=87 Identities=18% Similarity=0.251 Sum_probs=50.8
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHh-CCCccCCCCeechHH---------HHHHHHHhCCCCCCC
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHS-LGVSVSEDEIFSSSF---------AAAMYLKVNNFPQEN 108 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~-lG~~~~~~~i~~~~~---------~~~~~l~~~~~~~~~ 108 (304)
.++|++.++|+.|+++|++++++||++......+ +.. +|+.-..+.++++.. .....+...++.+.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~---~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~- 166 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFW---PEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPS- 166 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCC---GGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG-
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHH---HHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHH-
Confidence 4678999999999999999999999654442221 222 343322345555432 22234444555443
Q ss_pred eEEEEcC-hhHHHHHHHcCCcc
Q 022007 109 KVYVIGG-EGILEELRQAGYTG 129 (304)
Q Consensus 109 ~v~~~g~-~~~~~~l~~~g~~~ 129 (304)
.++++|- ..-....+..|+..
T Consensus 167 ~~~~vgD~~~Di~~a~~aG~~~ 188 (206)
T 2b0c_A 167 DTVFFDDNADNIEGANQLGITS 188 (206)
T ss_dssp GEEEEESCHHHHHHHHTTTCEE
T ss_pred HeEEeCCCHHHHHHHHHcCCeE
Confidence 3444443 34456667777654
No 190
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=94.64 E-value=0.028 Score=45.92 Aligned_cols=50 Identities=26% Similarity=0.254 Sum_probs=38.6
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechH
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSS 92 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~ 92 (304)
.++||+.++|+.|+++|++++++||+ +. .+...++.+|+.-..+.++++.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~---~~-~~~~~l~~~gl~~~f~~~~~~~ 144 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNA---SP-RVKTLLEKFDLKKYFDALALSY 144 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSC---HH-HHHHHHHHHTCGGGCSEEC---
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCC---cH-HHHHHHHhcCcHhHeeEEEecc
Confidence 47899999999999999999999993 23 4667788899876566666653
No 191
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=94.53 E-value=0.032 Score=45.78 Aligned_cols=89 Identities=10% Similarity=0.025 Sum_probs=56.0
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHH---HhCCCccCCCCeechHHH---------HHHHHHhCCCCCC
Q 022007 40 LIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKF---HSLGVSVSEDEIFSSSFA---------AAMYLKVNNFPQE 107 (304)
Q Consensus 40 ~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l---~~lG~~~~~~~i~~~~~~---------~~~~l~~~~~~~~ 107 (304)
++|++.++|+.|+++ ++++++||+.......+.+.| +.+|+.-..+.++++... ....+...|+.+.
T Consensus 113 ~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~~ 191 (229)
T 4dcc_A 113 IPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPK 191 (229)
T ss_dssp CCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred ccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCHH
Confidence 458899999999998 999999994322223333555 777876555666655332 2234445566543
Q ss_pred CeEEEEcCh-hHHHHHHHcCCccc
Q 022007 108 NKVYVIGGE-GILEELRQAGYTGL 130 (304)
Q Consensus 108 ~~v~~~g~~-~~~~~l~~~g~~~~ 130 (304)
. ++++|-. .-.+..+.+|+...
T Consensus 192 ~-~~~vGD~~~Di~~a~~aG~~~i 214 (229)
T 4dcc_A 192 E-TFFIDDSEINCKVAQELGISTY 214 (229)
T ss_dssp G-EEEECSCHHHHHHHHHTTCEEE
T ss_pred H-eEEECCCHHHHHHHHHcCCEEE
Confidence 3 4445443 44667788887654
No 192
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=94.53 E-value=0.16 Score=41.21 Aligned_cols=88 Identities=20% Similarity=0.189 Sum_probs=61.8
Q ss_pred CCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHHH---------HHHHHHhCCCCCC
Q 022007 37 GDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSFA---------AAMYLKVNNFPQE 107 (304)
Q Consensus 37 ~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~~---------~~~~l~~~~~~~~ 107 (304)
...++|++.++|+.|+++ ++++++|| .+.......++.+|+.-..+.++++... ....+...|+.+
T Consensus 98 ~~~~~~~~~~~l~~l~~~-~~~~i~t~---~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~- 172 (234)
T 3u26_A 98 YGELYPEVVEVLKSLKGK-YHVGMITD---SDTEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKG- 172 (234)
T ss_dssp HCCBCTTHHHHHHHHTTT-SEEEEEES---SCHHHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCG-
T ss_pred hCCcCcCHHHHHHHHHhC-CcEEEEEC---CCHHHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCc-
Confidence 345789999999999999 99999999 5666777788889987666666665321 233445556644
Q ss_pred CeEEEEcCh--hHHHHHHHcCCcc
Q 022007 108 NKVYVIGGE--GILEELRQAGYTG 129 (304)
Q Consensus 108 ~~v~~~g~~--~~~~~l~~~g~~~ 129 (304)
..++++|-. ...+.++..|+..
T Consensus 173 ~~~~~vGD~~~~Di~~a~~aG~~~ 196 (234)
T 3u26_A 173 EEAVYVGDNPVKDCGGSKNLGMTS 196 (234)
T ss_dssp GGEEEEESCTTTTHHHHHTTTCEE
T ss_pred hhEEEEcCCcHHHHHHHHHcCCEE
Confidence 345555554 3577788888654
No 193
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=94.41 E-value=0.11 Score=43.09 Aligned_cols=88 Identities=22% Similarity=0.256 Sum_probs=60.2
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechH----HHHHHHHHhCCCCCCCeEEEE
Q 022007 38 DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSS----FAAAMYLKVNNFPQENKVYVI 113 (304)
Q Consensus 38 ~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~----~~~~~~l~~~~~~~~~~v~~~ 113 (304)
..++|++.+.|+.|+ +|+++.++|| .+.......++.+|+.-..+.++++. ......+...++.+. .++++
T Consensus 111 ~~~~~~~~~~l~~l~-~~~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~i~~~~kp~~~~~~~~~~~l~~~~~-~~i~i 185 (251)
T 2pke_A 111 VEVIAGVREAVAAIA-ADYAVVLITK---GDLFHQEQKIEQSGLSDLFPRIEVVSEKDPQTYARVLSEFDLPAE-RFVMI 185 (251)
T ss_dssp CCBCTTHHHHHHHHH-TTSEEEEEEE---SCHHHHHHHHHHHSGGGTCCCEEEESCCSHHHHHHHHHHHTCCGG-GEEEE
T ss_pred CCcCccHHHHHHHHH-CCCEEEEEeC---CCHHHHHHHHHHcCcHHhCceeeeeCCCCHHHHHHHHHHhCcCch-hEEEE
Confidence 457899999999999 9999999999 45666677788888876566666542 233334455565543 45555
Q ss_pred cCh--hHHHHHHHcCCccc
Q 022007 114 GGE--GILEELRQAGYTGL 130 (304)
Q Consensus 114 g~~--~~~~~l~~~g~~~~ 130 (304)
|-. ...+.++..|+...
T Consensus 186 GD~~~~Di~~a~~aG~~~~ 204 (251)
T 2pke_A 186 GNSLRSDVEPVLAIGGWGI 204 (251)
T ss_dssp ESCCCCCCHHHHHTTCEEE
T ss_pred CCCchhhHHHHHHCCCEEE
Confidence 543 45667777787653
No 194
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=94.27 E-value=0.19 Score=39.40 Aligned_cols=84 Identities=18% Similarity=0.228 Sum_probs=55.5
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeech---------HHHHHHHHHhCCCCCCCe
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSS---------SFAAAMYLKVNNFPQENK 109 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~---------~~~~~~~l~~~~~~~~~~ 109 (304)
.++|++.+.++.|+++|++++++||.. ......++.+|+.-..+.++++ .......++..++. .
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~----~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~---~ 154 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRN----DQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS---S 154 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSC----THHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS---S
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCc----HHHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC---e
Confidence 378999999999999999999999842 2355677788876434444443 22334455555653 4
Q ss_pred EEEEcCh-hHHHHHHHcCCcc
Q 022007 110 VYVIGGE-GILEELRQAGYTG 129 (304)
Q Consensus 110 v~~~g~~-~~~~~l~~~g~~~ 129 (304)
++++|-. ...+.++..|+..
T Consensus 155 ~~~iGD~~~Di~~a~~aG~~~ 175 (190)
T 2fi1_A 155 GLVIGDRPIDIEAGQAAGLDT 175 (190)
T ss_dssp EEEEESSHHHHHHHHHTTCEE
T ss_pred EEEEcCCHHHHHHHHHcCCeE
Confidence 5555543 4456677778654
No 195
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=94.26 E-value=0.13 Score=41.26 Aligned_cols=85 Identities=12% Similarity=0.121 Sum_probs=55.0
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeech---------HHHHHHHHHhCCCCCCCe
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSS---------SFAAAMYLKVNNFPQENK 109 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~---------~~~~~~~l~~~~~~~~~~ 109 (304)
.+.|++.+.++.|++.|+++.++||. ......++.+|+.-..+.++++ .......+...|+.+..
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~-----~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~- 164 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS-----KNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSE- 164 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC-----TTHHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGG-
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc-----HHHHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhH-
Confidence 47899999999999999999999994 2334556677765333434332 12334455666665443
Q ss_pred EEEEc-ChhHHHHHHHcCCcc
Q 022007 110 VYVIG-GEGILEELRQAGYTG 129 (304)
Q Consensus 110 v~~~g-~~~~~~~l~~~g~~~ 129 (304)
++++| +..-.+.++..|+..
T Consensus 165 ~i~iGD~~nDi~~a~~aG~~~ 185 (221)
T 2wf7_A 165 SIGLEDSQAGIQAIKDSGALP 185 (221)
T ss_dssp EEEEESSHHHHHHHHHHTCEE
T ss_pred eEEEeCCHHHHHHHHHCCCEE
Confidence 44444 445566777788764
No 196
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=94.23 E-value=0.087 Score=42.02 Aligned_cols=89 Identities=16% Similarity=0.219 Sum_probs=55.8
Q ss_pred cCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCee-----------------ch--HHHHH
Q 022007 36 KGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIF-----------------SS--SFAAA 96 (304)
Q Consensus 36 ~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~-----------------~~--~~~~~ 96 (304)
....+.|++.++|+.|+++|+++.++|| ++.......++.+|++.....++ .. ...+.
T Consensus 73 ~~~~l~~~~~~~l~~l~~~g~~~~i~T~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~ 149 (211)
T 1l7m_A 73 KRITPTEGAEETIKELKNRGYVVAVVSG---GFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILE 149 (211)
T ss_dssp HTCCBCTTHHHHHHHHHHTTEEEEEEEE---EEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHH
T ss_pred HhCCCCccHHHHHHHHHHCCCEEEEEcC---CcHHHHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHH
Confidence 3456788999999999999999999999 56665556677777752111111 01 23344
Q ss_pred HHHHhCCCCCCCeEEEEc-ChhHHHHHHHcCCc
Q 022007 97 MYLKVNNFPQENKVYVIG-GEGILEELRQAGYT 128 (304)
Q Consensus 97 ~~l~~~~~~~~~~v~~~g-~~~~~~~l~~~g~~ 128 (304)
.++...++.+. .++++| +..-.+.++.+|+.
T Consensus 150 ~~~~~lgi~~~-~~~~iGD~~~Di~~~~~ag~~ 181 (211)
T 1l7m_A 150 KIAKIEGINLE-DTVAVGDGANDISMFKKAGLK 181 (211)
T ss_dssp HHHHHHTCCGG-GEEEEECSGGGHHHHHHCSEE
T ss_pred HHHHHcCCCHH-HEEEEecChhHHHHHHHCCCE
Confidence 45555565433 355555 44456677777764
No 197
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=94.21 E-value=0.09 Score=47.70 Aligned_cols=87 Identities=24% Similarity=0.231 Sum_probs=55.9
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCC-------CCeech--------HH----HHHHHHH
Q 022007 40 LIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSE-------DEIFSS--------SF----AAAMYLK 100 (304)
Q Consensus 40 ~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~-------~~i~~~--------~~----~~~~~l~ 100 (304)
+.||+.+.|+.|+++|+++.++|| .+.......++.+|++... +.++++ .. .....+.
T Consensus 257 ~~pg~~e~l~~Lk~~G~~~~ivS~---~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~ 333 (415)
T 3p96_A 257 LMPGARTTLRTLRRLGYACGVVSG---GFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQ 333 (415)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHCCCEEEEEcC---CcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHH
Confidence 588999999999999999999999 4566666778889987221 222211 12 2233444
Q ss_pred hCCCCCCCeEEEEcChhHHHHHHHcCCcc
Q 022007 101 VNNFPQENKVYVIGGEGILEELRQAGYTG 129 (304)
Q Consensus 101 ~~~~~~~~~v~~~g~~~~~~~l~~~g~~~ 129 (304)
..++.+...+++--+......++.+|+..
T Consensus 334 ~~gi~~~~~i~vGD~~~Di~~a~~aG~~v 362 (415)
T 3p96_A 334 RAGVPMAQTVAVGDGANDIDMLAAAGLGI 362 (415)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred HcCcChhhEEEEECCHHHHHHHHHCCCeE
Confidence 55665434344433345567778888654
No 198
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=94.15 E-value=0.13 Score=40.52 Aligned_cols=87 Identities=23% Similarity=0.307 Sum_probs=55.2
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeech---------HHHHHHHHHhCCCCCCC
Q 022007 38 DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSS---------SFAAAMYLKVNNFPQEN 108 (304)
Q Consensus 38 ~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~---------~~~~~~~l~~~~~~~~~ 108 (304)
..+.|++.+.++.|++.|+++.++||+. ..... .++.+|+.-..+.++.+ .......+...++.+.
T Consensus 84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~- 158 (207)
T 2go7_A 84 VVLMPGAREVLAWADESGIQQFIYTHKG---NNAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSD- 158 (207)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSC---THHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGG-
T ss_pred ceeCcCHHHHHHHHHHCCCeEEEEeCCc---hHHHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcc-
Confidence 3478999999999999999999999943 33344 56666765323333322 2233344555566543
Q ss_pred eEEEEcC-hhHHHHHHHcCCcc
Q 022007 109 KVYVIGG-EGILEELRQAGYTG 129 (304)
Q Consensus 109 ~v~~~g~-~~~~~~l~~~g~~~ 129 (304)
.++++|- ....+.++..|+..
T Consensus 159 ~~~~iGD~~nDi~~~~~aG~~~ 180 (207)
T 2go7_A 159 NTYYIGDRTLDVEFAQNSGIQS 180 (207)
T ss_dssp GEEEEESSHHHHHHHHHHTCEE
T ss_pred cEEEECCCHHHHHHHHHCCCeE
Confidence 4555554 45567778888763
No 199
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=94.11 E-value=0.24 Score=40.61 Aligned_cols=88 Identities=15% Similarity=0.078 Sum_probs=59.0
Q ss_pred cCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechH---------HHHHHHHHhCCCCC
Q 022007 36 KGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSS---------FAAAMYLKVNNFPQ 106 (304)
Q Consensus 36 ~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~ 106 (304)
....++|++.++|+.|++. ++++++|| .+.......++.+|+. .+.++++. ......+...|+.+
T Consensus 113 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~---~~~~~~~~~l~~~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~ 186 (254)
T 3umg_A 113 HVLTPWPDSVPGLTAIKAE-YIIGPLSN---GNTSLLLDMAKNAGIP--WDVIIGSDINRKYKPDPQAYLRTAQVLGLHP 186 (254)
T ss_dssp GSCCBCTTHHHHHHHHHHH-SEEEECSS---SCHHHHHHHHHHHTCC--CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCG
T ss_pred hhCcCCcCHHHHHHHHHhC-CeEEEEeC---CCHHHHHHHHHhCCCC--eeEEEEcCcCCCCCCCHHHHHHHHHHcCCCh
Confidence 3445789999999999997 99999999 5666667778888875 44444432 22334555667654
Q ss_pred CCeEEEEcC-hhHHHHHHHcCCccc
Q 022007 107 ENKVYVIGG-EGILEELRQAGYTGL 130 (304)
Q Consensus 107 ~~~v~~~g~-~~~~~~l~~~g~~~~ 130 (304)
.. ++++|- ....+.++.+|+...
T Consensus 187 ~~-~~~iGD~~~Di~~a~~aG~~~~ 210 (254)
T 3umg_A 187 GE-VMLAAAHNGDLEAAHATGLATA 210 (254)
T ss_dssp GG-EEEEESCHHHHHHHHHTTCEEE
T ss_pred HH-EEEEeCChHhHHHHHHCCCEEE
Confidence 43 555554 345667788887653
No 200
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=94.00 E-value=0.1 Score=45.71 Aligned_cols=88 Identities=13% Similarity=0.092 Sum_probs=56.8
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCC-------Cee------------chHHHHHHHH
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSED-------EIF------------SSSFAAAMYL 99 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~-------~i~------------~~~~~~~~~l 99 (304)
.+.||+.++++.|++.|++++++|| -........++++|++...+ ..+ .........+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~---~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~ 254 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASG---GFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLA 254 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHH
Confidence 4688999999999999999999999 45555666677788862211 111 1122233344
Q ss_pred HhCCCCCCCeEEEEc-ChhHHHHHHHcCCccc
Q 022007 100 KVNNFPQENKVYVIG-GEGILEELRQAGYTGL 130 (304)
Q Consensus 100 ~~~~~~~~~~v~~~g-~~~~~~~l~~~g~~~~ 130 (304)
...++.+.. ++++| +......++.+|+.+.
T Consensus 255 ~~lgi~~~~-~v~vGDs~nDi~~a~~aG~~va 285 (335)
T 3n28_A 255 QQYDVEIHN-TVAVGDGANDLVMMAAAGLGVA 285 (335)
T ss_dssp HHHTCCGGG-EEEEECSGGGHHHHHHSSEEEE
T ss_pred HHcCCChhh-EEEEeCCHHHHHHHHHCCCeEE
Confidence 555665433 44444 3455777888887654
No 201
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=93.94 E-value=0.35 Score=39.11 Aligned_cols=87 Identities=21% Similarity=0.227 Sum_probs=55.7
Q ss_pred ccCccHHHHHHHHHHC-CCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeec------hH----HHHHHHHHhCC--CC
Q 022007 39 KLIDGVRQTLDVLRSK-GKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFS------SS----FAAAMYLKVNN--FP 105 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~-G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~------~~----~~~~~~l~~~~--~~ 105 (304)
.+.|++.+.|+.|+++ |+++.++|| .+.......++.+|+.-..+.+++ .. ......+...| +.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~ 169 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTG---NFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYS 169 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECS---SCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCC
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcC---CcHHHHHHHHHHCCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCCC
Confidence 4789999999999999 999999999 456666677888887633332221 11 11222344456 54
Q ss_pred CCCeEEEEcC-hhHHHHHHHcCCcc
Q 022007 106 QENKVYVIGG-EGILEELRQAGYTG 129 (304)
Q Consensus 106 ~~~~v~~~g~-~~~~~~l~~~g~~~ 129 (304)
+. .++++|- ..-.+.++.+|+..
T Consensus 170 ~~-~~i~iGD~~~Di~~a~~aG~~~ 193 (234)
T 2hcf_A 170 PS-QIVIIGDTEHDIRCARELDARS 193 (234)
T ss_dssp GG-GEEEEESSHHHHHHHHTTTCEE
T ss_pred cc-cEEEECCCHHHHHHHHHCCCcE
Confidence 43 3555554 44566777788653
No 202
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=93.83 E-value=0.084 Score=44.06 Aligned_cols=86 Identities=17% Similarity=0.175 Sum_probs=57.3
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHHH---------HHHHHHhCCCCCCCeE
Q 022007 40 LIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSFA---------AAMYLKVNNFPQENKV 110 (304)
Q Consensus 40 ~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~~---------~~~~l~~~~~~~~~~v 110 (304)
++|++.+.++.|+++|+++.++|+ + +. ....|+.+|+.-.++.++++... ....++..|+.+...+
T Consensus 117 ~~p~~~~ll~~Lk~~g~~i~i~~~-~-~~---~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l 191 (250)
T 4gib_A 117 ILPGIESLLIDVKSNNIKIGLSSA-S-KN---AINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCI 191 (250)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCS-C-TT---HHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred cchhHHHHHHHHHhcccccccccc-c-ch---hhhHhhhcccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHeE
Confidence 588999999999999999877655 2 22 33568888988666767665322 2234455566654445
Q ss_pred EEEcChhHHHHHHHcCCccc
Q 022007 111 YVIGGEGILEELRQAGYTGL 130 (304)
Q Consensus 111 ~~~g~~~~~~~l~~~g~~~~ 130 (304)
++-.+..-.+..+++|+..+
T Consensus 192 ~VGDs~~Di~aA~~aG~~~i 211 (250)
T 4gib_A 192 GIEDASAGIDAINSANMFSV 211 (250)
T ss_dssp EEESSHHHHHHHHHTTCEEE
T ss_pred EECCCHHHHHHHHHcCCEEE
Confidence 54444455677788898654
No 203
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=92.86 E-value=0.011 Score=50.27 Aligned_cols=53 Identities=13% Similarity=0.184 Sum_probs=39.9
Q ss_pred EEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCee
Q 022007 34 IWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIF 89 (304)
Q Consensus 34 L~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~ 89 (304)
+.....++|++.++|+.|+++|++++++|| .+.......++++|++-..+.++
T Consensus 131 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~---~~~~~~~~~~~~~gl~~~f~~~~ 183 (263)
T 2yj3_A 131 FNISDVPRPNLKDYLEKLKNEGLKIIILSG---DKEDKVKELSKELNIQEYYSNLS 183 (263)
Confidence 344567899999999999999999999999 34555556677788864344443
No 204
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=93.20 E-value=0.3 Score=40.11 Aligned_cols=87 Identities=11% Similarity=0.102 Sum_probs=57.9
Q ss_pred CCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHH---------HHHHHHHhCCCCCC
Q 022007 37 GDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSF---------AAAMYLKVNNFPQE 107 (304)
Q Consensus 37 ~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~---------~~~~~l~~~~~~~~ 107 (304)
...++|++.++|+.|++. ++++++|| .+.......++.+|+. .+.++++.. .....+...|+.+.
T Consensus 118 ~~~~~~~~~~~l~~l~~~-~~~~i~s~---~~~~~~~~~l~~~g~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 191 (254)
T 3umc_A 118 RLRPWPDTLAGMHALKAD-YWLAALSN---GNTALMLDVARHAGLP--WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQ 191 (254)
T ss_dssp SCEECTTHHHHHHHHTTT-SEEEECCS---SCHHHHHHHHHHHTCC--CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGG
T ss_pred cCCCCccHHHHHHHHHhc-CeEEEEeC---CCHHHHHHHHHHcCCC--cceEEeecccccCCCCHHHHHHHHHHcCCChH
Confidence 345789999999999986 99999999 5666677778888875 455554422 23334455566543
Q ss_pred CeEEEEcC-hhHHHHHHHcCCccc
Q 022007 108 NKVYVIGG-EGILEELRQAGYTGL 130 (304)
Q Consensus 108 ~~v~~~g~-~~~~~~l~~~g~~~~ 130 (304)
.++++|- ....+.++.+|+...
T Consensus 192 -~~~~iGD~~~Di~~a~~aG~~~~ 214 (254)
T 3umc_A 192 -EVMLCAAHNYDLKAARALGLKTA 214 (254)
T ss_dssp -GEEEEESCHHHHHHHHHTTCEEE
T ss_pred -HEEEEcCchHhHHHHHHCCCeEE
Confidence 4555553 344667788887653
No 205
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=93.07 E-value=0.34 Score=39.10 Aligned_cols=82 Identities=17% Similarity=0.193 Sum_probs=56.7
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHH---------HHHHHHHhCCCCCCCe
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSF---------AAAMYLKVNNFPQENK 109 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~---------~~~~~l~~~~~~~~~~ 109 (304)
.++|++.++|+.|+++ ++++++||+... ++.+|+.-..+.++++.. .....++..|+.+. .
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~--------l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~-~ 174 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD--------VRRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDAS-A 174 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC--------GGGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGG-G
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh--------hhhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCch-h
Confidence 4789999999999998 999999995533 677888766677766532 23334455566543 4
Q ss_pred EEEEcCh--hHHHHHHHcCCccc
Q 022007 110 VYVIGGE--GILEELRQAGYTGL 130 (304)
Q Consensus 110 v~~~g~~--~~~~~l~~~g~~~~ 130 (304)
++++|-. ...+..+..|+...
T Consensus 175 ~~~vGD~~~~Di~~a~~aG~~~~ 197 (230)
T 3vay_A 175 AVHVGDHPSDDIAGAQQAGMRAI 197 (230)
T ss_dssp EEEEESCTTTTHHHHHHTTCEEE
T ss_pred eEEEeCChHHHHHHHHHCCCEEE
Confidence 5555554 46777888887653
No 206
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=92.51 E-value=0.63 Score=37.52 Aligned_cols=86 Identities=16% Similarity=0.183 Sum_probs=56.8
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHHHH---------HHH---HHhCCCC
Q 022007 38 DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSFAA---------AMY---LKVNNFP 105 (304)
Q Consensus 38 ~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~~~---------~~~---l~~~~~~ 105 (304)
..++|++.++|+.|++ |++++++|| .+.......++.++ ...+.++++.... ... +...++.
T Consensus 98 ~~~~~~~~~~l~~l~~-~~~~~i~tn---~~~~~~~~~l~~l~--~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~ 171 (240)
T 3smv_A 98 WPAFPDTVEALQYLKK-HYKLVILSN---IDRNEFKLSNAKLG--VEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIE 171 (240)
T ss_dssp CCBCTTHHHHHHHHHH-HSEEEEEES---SCHHHHHHHHTTTC--SCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCC
T ss_pred CCCCCcHHHHHHHHHh-CCeEEEEeC---CChhHHHHHHHhcC--CccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCC
Confidence 3578999999999999 899999999 45666666676655 3445566554221 012 4555665
Q ss_pred CCCeEEEEcCh--hHHHHHHHcCCccc
Q 022007 106 QENKVYVIGGE--GILEELRQAGYTGL 130 (304)
Q Consensus 106 ~~~~v~~~g~~--~~~~~l~~~g~~~~ 130 (304)
+. .++++|-. .-.+..+.+|+...
T Consensus 172 ~~-~~~~vGD~~~~Di~~a~~aG~~~~ 197 (240)
T 3smv_A 172 KK-DILHTAESLYHDHIPANDAGLVSA 197 (240)
T ss_dssp GG-GEEEEESCTTTTHHHHHHHTCEEE
T ss_pred ch-hEEEECCCchhhhHHHHHcCCeEE
Confidence 43 45555543 56777888887654
No 207
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=92.47 E-value=0.13 Score=46.33 Aligned_cols=51 Identities=12% Similarity=0.117 Sum_probs=38.9
Q ss_pred cCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc--cCCCCee
Q 022007 36 KGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS--VSEDEIF 89 (304)
Q Consensus 36 ~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~--~~~~~i~ 89 (304)
.+-+++|++.+.++.|+++|+.++|+|+ -....+....+++|++ ++.++|+
T Consensus 218 ~gir~~p~~~eLi~~L~~~G~~v~IVSg---g~~~~v~~ia~~lg~~y~ip~~~Vi 270 (385)
T 4gxt_A 218 VGIRTLDEMVDLYRSLEENGIDCYIVSA---SFIDIVRAFATDTNNNYKMKEEKVL 270 (385)
T ss_dssp ECCEECHHHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHCTTSSCCCCGGGEE
T ss_pred cCceeCHHHHHHHHHHHHCCCeEEEEcC---CcHHHHHHHHHHhCcccCCCcceEE
Confidence 4557899999999999999999999999 3344455566678875 5555544
No 208
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=92.44 E-value=0.11 Score=41.61 Aligned_cols=34 Identities=9% Similarity=0.105 Sum_probs=28.3
Q ss_pred CCccCccHHHHHHHHHHC-CCcEEEEeCCCCcCHH
Q 022007 37 GDKLIDGVRQTLDVLRSK-GKKLIFVTNNSRRSRR 70 (304)
Q Consensus 37 ~~~~~~~a~eal~~L~~~-G~~~~i~Tn~s~r~~~ 70 (304)
...++||+.++|+.|+++ |+++.++||++.....
T Consensus 73 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~ 107 (197)
T 1q92_A 73 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKY 107 (197)
T ss_dssp TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSS
T ss_pred cCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHH
Confidence 346899999999999999 9999999996654433
No 209
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=92.35 E-value=0.12 Score=41.33 Aligned_cols=42 Identities=7% Similarity=-0.008 Sum_probs=31.5
Q ss_pred CCccCccHHHHHHHHHHC-CCcEEEEeCCCCcCHHHHHHHHHhCCC
Q 022007 37 GDKLIDGVRQTLDVLRSK-GKKLIFVTNNSRRSRRQYAHKFHSLGV 81 (304)
Q Consensus 37 ~~~~~~~a~eal~~L~~~-G~~~~i~Tn~s~r~~~~~~~~l~~lG~ 81 (304)
...++||+.++|+.|+++ |++++++||++...... .++.+|+
T Consensus 71 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~---~l~~~gl 113 (193)
T 2i7d_A 71 DLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHC---VGEKYRW 113 (193)
T ss_dssp TCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTT---HHHHHHH
T ss_pred cCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHH---HHHHhCc
Confidence 346899999999999999 99999999965444333 3444444
No 210
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=92.22 E-value=0.048 Score=46.31 Aligned_cols=95 Identities=14% Similarity=-0.019 Sum_probs=60.2
Q ss_pred CHHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCCC-----cc--cCCCcHHHHHHHHHH
Q 022007 166 NYYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEP-----IV--VGKPSTFMMEILSKK 237 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~-----~~--~gKP~~~~~~~al~~ 237 (304)
.++++.+.+..|+++ |.+ +++||++.... .......+.. .|... .. .++++....+..+..
T Consensus 102 ~~pg~~ell~~L~~~-G~~i~ivTgR~~~~~---------r~~T~~~L~~-lGi~~~~~~~Lilr~~~~~K~~~r~~L~~ 170 (260)
T 3pct_A 102 AIPGAVEFSNYVNAN-GGTMFFVSNRRDDVE---------KAGTVDDMKR-LGFTGVNDKTLLLKKDKSNKSVRFKQVED 170 (260)
T ss_dssp ECTTHHHHHHHHHHT-TCEEEEEEEEETTTS---------HHHHHHHHHH-HTCCCCSTTTEEEESSCSSSHHHHHHHHT
T ss_pred CCccHHHHHHHHHHC-CCeEEEEeCCCcccc---------HHHHHHHHHH-cCcCccccceeEecCCCCChHHHHHHHHh
Confidence 367888889999887 664 77899765200 0112222322 23221 11 235666666666665
Q ss_pred cCCCCCcEEEEcCCchhhHHH--------HHHcCCeEEEEccCCC
Q 022007 238 FQIASSRMCMVGDRLDTDILF--------GQNAGCKTLLVLSGVT 274 (304)
Q Consensus 238 lg~~~~~~~~IGD~~~~Di~~--------a~~aG~~ti~V~~G~~ 274 (304)
.|. .-+++|||+ .+|+.+ +++++++++.+.+|..
T Consensus 171 ~gy--~iv~~iGD~-~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~ 212 (260)
T 3pct_A 171 MGY--DIVLFVGDN-LNDFGDATYKKSNAERRDFVAKNSKAFGKK 212 (260)
T ss_dssp TTC--EEEEEEESS-GGGGCGGGTTCCHHHHHHHHHHTGGGBTTT
T ss_pred cCC--CEEEEECCC-hHHcCcccccCCHHHHHHHHHHHHHHhCCC
Confidence 554 349999999 899998 7888888777777753
No 211
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=92.04 E-value=0.12 Score=42.64 Aligned_cols=39 Identities=10% Similarity=0.193 Sum_probs=31.2
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCC
Q 022007 38 DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGV 81 (304)
Q Consensus 38 ~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~ 81 (304)
..++||+.++|+.|+++|++++++|| .+.......++ |+
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~---~~~~~~~~~l~--~l 114 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISG---GMDFFVYPLLE--GI 114 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEE---EEHHHHHHHHT--TT
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeC---CcHHHHHHHHh--cC
Confidence 45799999999999999999999999 34444555555 65
No 212
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=91.87 E-value=0.65 Score=38.51 Aligned_cols=89 Identities=18% Similarity=0.166 Sum_probs=54.3
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccC-CCCeech---------HHHHHHHHHhCCCCCC
Q 022007 38 DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVS-EDEIFSS---------SFAAAMYLKVNNFPQE 107 (304)
Q Consensus 38 ~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~-~~~i~~~---------~~~~~~~l~~~~~~~~ 107 (304)
..++|++.+.++.|++.|+++.++|| .+.......++.+|+.-. .+.++++ .......+...|+.+.
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 178 (267)
T 1swv_A 102 ASPINGVKEVIASLRERGIKIGSTTG---YTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPM 178 (267)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCS---SCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSG
T ss_pred cccCccHHHHHHHHHHcCCeEEEEcC---CCHHHHHHHHHHcCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCC
Confidence 45789999999999999999999999 445555555555554322 1333322 2233344455566431
Q ss_pred CeEEEEcC-hhHHHHHHHcCCcc
Q 022007 108 NKVYVIGG-EGILEELRQAGYTG 129 (304)
Q Consensus 108 ~~v~~~g~-~~~~~~l~~~g~~~ 129 (304)
..++++|- ....+.++.+|+..
T Consensus 179 ~~~i~iGD~~nDi~~a~~aG~~~ 201 (267)
T 1swv_A 179 NHMIKVGDTVSDMKEGRNAGMWT 201 (267)
T ss_dssp GGEEEEESSHHHHHHHHHTTSEE
T ss_pred cCEEEEeCCHHHHHHHHHCCCEE
Confidence 24555554 34566777778643
No 213
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=91.78 E-value=0.046 Score=46.46 Aligned_cols=95 Identities=15% Similarity=-0.054 Sum_probs=56.0
Q ss_pred CHHHHHHHHHHHHcCCCce-EEEecCCCccCCCCCccccChHHHHHHHHHhhCCC-----Cc--ccCCCcHHHHHHHHHH
Q 022007 166 NYYKLQYGTLCIRENPGCL-FIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKE-----PI--VVGKPSTFMMEILSKK 237 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~-~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~-----~~--~~gKP~~~~~~~al~~ 237 (304)
.++++.+.++.|+++ |.+ +++||.+.... .......+.. .|.. .. ...+|+....+..+..
T Consensus 102 ~~pG~~ell~~L~~~-G~ki~ivTgR~~~~~---------r~~T~~~L~~-lGi~~~~~~~Lilr~~~~~K~~~r~~l~~ 170 (262)
T 3ocu_A 102 AVPGAVEFNNYVNSH-NGKVFYVTNRKDSTE---------KSGTIDDMKR-LGFNGVEESAFYLKKDKSAKAARFAEIEK 170 (262)
T ss_dssp ECTTHHHHHHHHHHT-TEEEEEEEEEETTTT---------HHHHHHHHHH-HTCSCCSGGGEEEESSCSCCHHHHHHHHH
T ss_pred CCccHHHHHHHHHHC-CCeEEEEeCCCccch---------HHHHHHHHHH-cCcCcccccceeccCCCCChHHHHHHHHh
Confidence 356788888999887 665 77898765200 0011222222 2222 11 1123433444444444
Q ss_pred cCCCCCcEEEEcCCchhhHHH--------HHHcCCeEEEEccCCC
Q 022007 238 FQIASSRMCMVGDRLDTDILF--------GQNAGCKTLLVLSGVT 274 (304)
Q Consensus 238 lg~~~~~~~~IGD~~~~Di~~--------a~~aG~~ti~V~~G~~ 274 (304)
.|.. -+++|||+ .+|+.+ +++++++++.+.+|..
T Consensus 171 ~Gy~--iv~~vGD~-~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~ 212 (262)
T 3ocu_A 171 QGYE--IVLYVGDN-LDDFGNTVYGKLNADRRAFVDQNQGKFGKT 212 (262)
T ss_dssp TTEE--EEEEEESS-GGGGCSTTTTCCHHHHHHHHHHTGGGBTTT
T ss_pred cCCC--EEEEECCC-hHHhccccccCCHHHHHHHHHHHHHHhCCC
Confidence 4443 49999999 899998 7888887777777753
No 214
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=91.18 E-value=0.12 Score=42.39 Aligned_cols=41 Identities=15% Similarity=0.261 Sum_probs=32.9
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 38 DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 38 ~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
..++||+.++|+.|+++| ++.++||+ +.......|+.+|+.
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~---~~~~~~~~l~~~gl~ 135 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDG---DVVFQPRKIARSGLW 135 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEEC---CSSHHHHHHHHTTHH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCC---CHHHHHHHHHHcCcH
Confidence 357999999999999999 99999994 344555667777775
No 215
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=90.45 E-value=0.26 Score=39.26 Aligned_cols=40 Identities=18% Similarity=0.302 Sum_probs=34.6
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 40 LIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 40 ~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
+.|++.+.++.|+++|+++.++|| .+...+...++.+|++
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~~~~~~~~ 122 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSG---GLSESIQPFADYLNIP 122 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHHTCC
T ss_pred CChhHHHHHHHHHHCCCeEEEEcC---CcHHHHHHHHHHcCCC
Confidence 678999999999999999999999 5666677778888874
No 216
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=89.38 E-value=0.37 Score=38.36 Aligned_cols=44 Identities=16% Similarity=0.240 Sum_probs=36.4
Q ss_pred cCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCcc
Q 022007 36 KGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSV 83 (304)
Q Consensus 36 ~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~ 83 (304)
....++||+.+.|+.|+++ ++++++|| .+.......++.+|++-
T Consensus 66 ~~~~~~~g~~~~l~~l~~~-~~~~i~s~---~~~~~~~~~l~~~gl~~ 109 (206)
T 1rku_A 66 ATLKPLEGAVEFVDWLRER-FQVVILSD---TFYEFSQPLMRQLGFPT 109 (206)
T ss_dssp TTCCCCTTHHHHHHHHHTT-SEEEEEEE---EEHHHHHHHHHHTTCCC
T ss_pred HhcCCCccHHHHHHHHHhc-CcEEEEEC---ChHHHHHHHHHHcCCcc
Confidence 3446799999999999999 99999999 45666677888888863
No 217
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=89.13 E-value=0.079 Score=44.49 Aligned_cols=38 Identities=13% Similarity=0.184 Sum_probs=29.5
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcC----CchhhHHHHHHcCCeEEEE
Q 022007 227 STFMMEILSKKFQIASSRMCMVGD----RLDTDILFGQNAGCKTLLV 269 (304)
Q Consensus 227 ~~~~~~~al~~lg~~~~~~~~IGD----~~~~Di~~a~~aG~~ti~V 269 (304)
+..+++.+++ +++++++||| + .||++|.+.+|...+.|
T Consensus 188 Kg~al~~L~~----~~~ev~afGD~~~~g-~NDi~Ml~~a~~~g~~v 229 (246)
T 3f9r_A 188 KTYCLQFVED----DFEEIHFFGDKTQEG-GNDYEIYTDKRTIGHKV 229 (246)
T ss_dssp GGGGGGGTTT----TCSEEEEEESCCSTT-STTHHHHTCTTSEEEEC
T ss_pred HHHHHHHHHc----CcccEEEEeCCCCCC-CCCHHHHhCCCccEEEe
Confidence 3566666666 8899999999 6 79999999887544544
No 218
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=88.65 E-value=0.43 Score=37.40 Aligned_cols=27 Identities=7% Similarity=0.148 Sum_probs=23.8
Q ss_pred CCccCccHHHHHHHHHHCCCcEEEEeCC
Q 022007 37 GDKLIDGVRQTLDVLRSKGKKLIFVTNN 64 (304)
Q Consensus 37 ~~~~~~~a~eal~~L~~~G~~~~i~Tn~ 64 (304)
...++||+.++|+.|+++ +++.++||.
T Consensus 67 ~~~~~pg~~e~L~~L~~~-~~~~i~T~~ 93 (180)
T 3bwv_A 67 NLDVMPHAQEVVKQLNEH-YDIYIATAA 93 (180)
T ss_dssp SCCBCTTHHHHHHHHTTT-SEEEEEECC
T ss_pred cCCCCcCHHHHHHHHHhc-CCEEEEeCC
Confidence 446899999999999985 999999994
No 219
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis}
Probab=86.85 E-value=1.2 Score=32.88 Aligned_cols=73 Identities=15% Similarity=0.221 Sum_probs=49.4
Q ss_pred ccCEEEEeE--EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc--cCCCCeechHHHHHHHH
Q 022007 24 SVDAFLFDC--VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS--VSEDEIFSSSFAAAMYL 99 (304)
Q Consensus 24 ~~k~i~fDi--tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~--~~~~~i~~~~~~~~~~l 99 (304)
..+.+++|+ |-+-+..-+..-.++.+.++++|..++++.- ...+.+.|+..|+. +..+.++.+...+..++
T Consensus 47 ~~~~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~-----~~~v~~~l~~~gl~~~~~~~~i~~t~~~Al~~~ 121 (130)
T 2kln_A 47 QVEWFVLNAESNVEVDLTALDALDQLRTELLRRGIVFAMARV-----KQDLRESLRAASLLDKIGEDHIFMTLPTAVQAF 121 (130)
T ss_dssp CCEEEEEECSCCSSSBCSTTTHHHHHHHHHHTTTEEEEEECC-----SSHHHHHHHHCTTHHHHCTTEEESCHHHHHHHH
T ss_pred CceEEEEECCCCChhhHHHHHHHHHHHHHHHHCCCEEEEEcC-----CHHHHHHHHHcCChhhcCcceeECCHHHHHHHH
Confidence 367899999 4333333333346888889999988865432 34678888889986 55667777766666666
Q ss_pred Hh
Q 022007 100 KV 101 (304)
Q Consensus 100 ~~ 101 (304)
..
T Consensus 122 ~~ 123 (130)
T 2kln_A 122 RR 123 (130)
T ss_dssp TT
T ss_pred Hh
Confidence 54
No 220
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=86.83 E-value=2.9 Score=33.31 Aligned_cols=84 Identities=20% Similarity=0.203 Sum_probs=52.8
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCC-CCeechHH-----------HHHHHHHhCCCC
Q 022007 38 DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSE-DEIFSSSF-----------AAAMYLKVNNFP 105 (304)
Q Consensus 38 ~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~-~~i~~~~~-----------~~~~~l~~~~~~ 105 (304)
..++|++.+.++.|+. +++++|| .+...+...++.+|+.-.. +.++++.. .....+...|+.
T Consensus 86 ~~~~~~~~~~l~~l~~---~~~i~s~---~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~ 159 (229)
T 2fdr_A 86 VKIIDGVKFALSRLTT---PRCICSN---SSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVS 159 (229)
T ss_dssp CCBCTTHHHHHHHCCS---CEEEEES---SCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCC
T ss_pred CccCcCHHHHHHHhCC---CEEEEEC---CChhHHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCC
Confidence 3578899999888763 8999999 4666777788888887545 55554422 223334444554
Q ss_pred CCCeEEEEcC-hhHHHHHHHcCCc
Q 022007 106 QENKVYVIGG-EGILEELRQAGYT 128 (304)
Q Consensus 106 ~~~~v~~~g~-~~~~~~l~~~g~~ 128 (304)
+. .++++|- ..-.+.++..|+.
T Consensus 160 ~~-~~i~iGD~~~Di~~a~~aG~~ 182 (229)
T 2fdr_A 160 PD-RVVVVEDSVHGIHGARAAGMR 182 (229)
T ss_dssp GG-GEEEEESSHHHHHHHHHTTCE
T ss_pred hh-HeEEEcCCHHHHHHHHHCCCE
Confidence 33 3444443 3445666777765
No 221
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=86.27 E-value=3.3 Score=34.52 Aligned_cols=84 Identities=11% Similarity=0.055 Sum_probs=47.5
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhC--C---------CccCCCCeechH--------HHHHHHHH
Q 022007 40 LIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSL--G---------VSVSEDEIFSSS--------FAAAMYLK 100 (304)
Q Consensus 40 ~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~l--G---------~~~~~~~i~~~~--------~~~~~~l~ 100 (304)
++||+.++|+. |+++.++|| .++......|+.+ | +.-..+.++.+. ......++
T Consensus 126 ~~pgv~e~L~~----g~~l~i~Tn---~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p~~~~~a~~ 198 (253)
T 2g80_A 126 VYADAIDFIKR----KKRVFIYSS---GSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILR 198 (253)
T ss_dssp CCHHHHHHHHH----CSCEEEECS---SCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHHH
T ss_pred CCCCHHHHHHc----CCEEEEEeC---CCHHHHHHHHHhhcccccccccccchHhhcceEEeeeccCCCCCHHHHHHHHH
Confidence 46677777766 999999999 4555556667765 5 221123333321 11222334
Q ss_pred hCCCCCCCeEEEEcChhHHHHHHHcCCccc
Q 022007 101 VNNFPQENKVYVIGGEGILEELRQAGYTGL 130 (304)
Q Consensus 101 ~~~~~~~~~v~~~g~~~~~~~l~~~g~~~~ 130 (304)
..|+.+...+++--+..-....+++|+...
T Consensus 199 ~lg~~p~~~l~vgDs~~di~aA~~aG~~~i 228 (253)
T 2g80_A 199 DIGAKASEVLFLSDNPLELDAAAGVGIATG 228 (253)
T ss_dssp HHTCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred HcCCCcccEEEEcCCHHHHHHHHHcCCEEE
Confidence 556655444555444444566677787653
No 222
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=86.07 E-value=0.63 Score=40.80 Aligned_cols=51 Identities=10% Similarity=0.265 Sum_probs=39.3
Q ss_pred CCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHH-HHhC--CCccCCCCeech
Q 022007 37 GDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHK-FHSL--GVSVSEDEIFSS 91 (304)
Q Consensus 37 ~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~-l~~l--G~~~~~~~i~~~ 91 (304)
..+++|++.+.++.|+++|+.++|+|. +.+.+.+- .+.+ |+.+++++|+-+
T Consensus 141 ~~~~~~~~~~l~~~l~~~G~~v~ivSa----s~~~~v~~~a~~~~~~ygIp~e~ViG~ 194 (327)
T 4as2_A 141 PPRVFSGQRELYNKLMENGIEVYVISA----AHEELVRMVAADPRYGYNAKPENVIGV 194 (327)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEE----EEHHHHHHHHTCGGGSCCCCGGGEEEE
T ss_pred ccccCHHHHHHHHHHHHCCCEEEEEeC----CcHHHHHHHHhhcccccCCCHHHeEee
Confidence 446899999999999999999999998 44455544 4444 677887877764
No 223
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=84.61 E-value=0.82 Score=41.02 Aligned_cols=35 Identities=17% Similarity=0.161 Sum_probs=25.3
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcC
Q 022007 227 STFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAG 263 (304)
Q Consensus 227 ~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG 263 (304)
++..++..++. ......++++||+ .+|+.|.++.+
T Consensus 298 K~~~i~~~~~~-~~~~~~i~a~GDs-~~D~~ML~~~~ 332 (385)
T 4gxt_A 298 KVQTINKLIKN-DRNYGPIMVGGDS-DGDFAMLKEFD 332 (385)
T ss_dssp HHHHHHHHTCC-TTEECCSEEEECS-GGGHHHHHHCT
T ss_pred hHHHHHHHHHh-cCCCCcEEEEECC-HhHHHHHhcCc
Confidence 46666655432 2445679999999 99999999854
No 224
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A*
Probab=79.64 E-value=1.8 Score=31.97 Aligned_cols=72 Identities=13% Similarity=0.243 Sum_probs=44.8
Q ss_pred hccCEEEEeE--EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc--cCCCCeechHHHHHHH
Q 022007 23 DSVDAFLFDC--VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS--VSEDEIFSSSFAAAMY 98 (304)
Q Consensus 23 ~~~k~i~fDi--tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~--~~~~~i~~~~~~~~~~ 98 (304)
...+.+++|+ |-+-+..-+..-.+..++++++|..++++ | ....+.+.|+..|+. +..+.++.+...+..+
T Consensus 47 ~~~~~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~-~----~~~~v~~~l~~~gl~~~~~~~~i~~s~~~Al~~ 121 (130)
T 4dgh_A 47 ETPQILILRLKWVPFMDITGIQTLEEMIQSFHKRGIKVLIS-G----ANSRVSQKLVKAGIVKLVGEQNVYPVFEGALSA 121 (130)
T ss_dssp SCCSEEEEECTTCCCCCHHHHHHHHHHHHHHHTTTCEEEEE-C----CCHHHHHHHHHTTHHHHHCGGGEESSHHHHHHH
T ss_pred cCCCEEEEECCCCCcccHHHHHHHHHHHHHHHHCCCEEEEE-c----CCHHHHHHHHHcCChhhcCcccccCCHHHHHHH
Confidence 4567888998 33322222222257777888899988654 4 345677888888876 4455667665555444
Q ss_pred H
Q 022007 99 L 99 (304)
Q Consensus 99 l 99 (304)
.
T Consensus 122 ~ 122 (130)
T 4dgh_A 122 A 122 (130)
T ss_dssp H
T ss_pred H
Confidence 4
No 225
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=78.50 E-value=0.42 Score=37.51 Aligned_cols=40 Identities=20% Similarity=0.349 Sum_probs=29.8
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.+.|++.+.|+.|+++|+++.++||+.... .... +.+|++
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~---~~~~-~~~~~~ 118 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEV---LEPF-KELGDE 118 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTT---SGGG-TTTSSE
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHH---HHHH-HHcCch
Confidence 567899999999999999999999943322 2233 556664
No 226
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=74.38 E-value=2.7 Score=34.08 Aligned_cols=55 Identities=9% Similarity=0.045 Sum_probs=39.9
Q ss_pred hccCEEEEeE--EEEcCC---------ccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCC
Q 022007 23 DSVDAFLFDC--VIWKGD---------KLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGV 81 (304)
Q Consensus 23 ~~~k~i~fDi--tL~~~~---------~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~ 81 (304)
.+.+++++|+ ||.... ..-||+.++|+.+. +++.++|.|.+ ++......++.++.
T Consensus 32 ~~~~tLVLDLDeTLvh~~~~~~~~~~v~~RPgl~eFL~~l~-~~yeivI~Tas---~~~ya~~vl~~LDp 97 (204)
T 3qle_A 32 QRPLTLVITLEDFLVHSEWSQKHGWRTAKRPGADYFLGYLS-QYYEIVLFSSN---YMMYSDKIAEKLDP 97 (204)
T ss_dssp CCSEEEEEECBTTTEEEEEETTTEEEEEECTTHHHHHHHHT-TTEEEEEECSS---CHHHHHHHHHHTST
T ss_pred CCCeEEEEeccccEEeeeccccCceeEEeCCCHHHHHHHHH-hCCEEEEEcCC---cHHHHHHHHHHhCC
Confidence 4567999999 887531 25789999999998 78999999983 34444445555554
No 227
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus}
Probab=72.79 E-value=3.3 Score=31.00 Aligned_cols=72 Identities=11% Similarity=0.131 Sum_probs=44.9
Q ss_pred ccCEEEEeE--EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCcc--C-CCCeechHHHHHHH
Q 022007 24 SVDAFLFDC--VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSV--S-EDEIFSSSFAAAMY 98 (304)
Q Consensus 24 ~~k~i~fDi--tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~--~-~~~i~~~~~~~~~~ 98 (304)
..+.+++|+ |-+-+..-+..-.+..+.++++|..+.++ | ....+.+.|+..|+.- . ...++.+...+..+
T Consensus 63 ~~~~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~-~----~~~~v~~~l~~~gl~~~~~~~~~if~s~~~Al~~ 137 (143)
T 3llo_A 63 NIHTVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYLA-G----CSAQVVNDLTSNRFFENPALKELLFHSIHDAVLG 137 (143)
T ss_dssp CCSEEEEECTTCCCCCHHHHHHHHHHHHHHHTTTCEEEEE-S----CCHHHHHHHHHTTTTSSGGGGGGEESSHHHHHHH
T ss_pred CceEEEEECCCCccccHHHHHHHHHHHHHHHHCCCEEEEE-e----CCHHHHHHHHhCCCeeccCccceEECcHHHHHHH
Confidence 467788888 33322222221246777788899988654 4 2356788899999873 2 45677776666555
Q ss_pred HH
Q 022007 99 LK 100 (304)
Q Consensus 99 l~ 100 (304)
+.
T Consensus 138 ~~ 139 (143)
T 3llo_A 138 SQ 139 (143)
T ss_dssp TS
T ss_pred HH
Confidence 43
No 228
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=72.05 E-value=45 Score=28.28 Aligned_cols=20 Identities=10% Similarity=0.112 Sum_probs=13.8
Q ss_pred HHHHHHHHcCCC-CCcEEEEc
Q 022007 230 MMEILSKKFQIA-SSRMCMVG 249 (304)
Q Consensus 230 ~~~~al~~lg~~-~~~~~~IG 249 (304)
....+++..|+. |+++-+||
T Consensus 256 g~~~al~~~G~~vP~di~vvg 276 (338)
T 3dbi_A 256 GAMKALHERGVAVPEQVSVIG 276 (338)
T ss_dssp HHHHHHHHTTCCTTTTCEEEE
T ss_pred HHHHHHHHcCCCCCCCeEEEE
Confidence 355677788886 67776666
No 229
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=71.70 E-value=41 Score=27.65 Aligned_cols=22 Identities=14% Similarity=0.264 Sum_probs=15.2
Q ss_pred HHHHHHHHcCCC-CCcEEEEcCC
Q 022007 230 MMEILSKKFQIA-SSRMCMVGDR 251 (304)
Q Consensus 230 ~~~~al~~lg~~-~~~~~~IGD~ 251 (304)
....+++..|+. |+++.+||=+
T Consensus 215 g~~~al~~~g~~vP~di~vvg~d 237 (298)
T 3tb6_A 215 KVIDMLREMDLKVPEDMSIVGYD 237 (298)
T ss_dssp HHHHHHHHTTCCTTTTCEEECSB
T ss_pred HHHHHHHHcCCCCCCceEEEecC
Confidence 355667778876 7888777744
No 230
>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A
Probab=70.63 E-value=6 Score=32.98 Aligned_cols=46 Identities=13% Similarity=0.141 Sum_probs=38.8
Q ss_pred ccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCeEEEEcc
Q 022007 222 VVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLS 271 (304)
Q Consensus 222 ~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~~ti~V~~ 271 (304)
..|| ...|+.+.+++| +.-.-++|||+ ..--++|+..+|+.+-|..
T Consensus 213 kiGK--esCFerI~~RFG-~k~~yvvIGDG-~eEe~AAk~~n~PFwrI~~ 258 (274)
T 3geb_A 213 KTGK--ESCFERIMQRFG-RKAVYVVIGDG-VEEEQGAKKHNMPFWRISC 258 (274)
T ss_dssp TTCH--HHHHHHHHHHHC-TTSEEEEEESS-HHHHHHHHHTTCCEEECCS
T ss_pred hcCH--HHHHHHHHHHhC-CCceEEEECCC-HHHHHHHHHcCCCeEEeec
Confidence 3455 899999999998 45688999999 7888999999999887743
No 231
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli}
Probab=70.34 E-value=3.2 Score=30.08 Aligned_cols=64 Identities=14% Similarity=0.142 Sum_probs=38.5
Q ss_pred hccCEEEEeE--EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc--cCCCCeechH
Q 022007 23 DSVDAFLFDC--VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS--VSEDEIFSSS 92 (304)
Q Consensus 23 ~~~k~i~fDi--tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~--~~~~~i~~~~ 92 (304)
...+.+++|+ |-+-+..-+.--.+..+++++ |+.++++ | ....+.+.|+..|+. +..+.++.+.
T Consensus 44 ~~~~~vilDl~~v~~iDssgl~~L~~~~~~~~~-g~~l~l~-~----~~~~v~~~l~~~gl~~~~~~~~i~~s~ 111 (118)
T 3ny7_A 44 EGKRIVILKWDAVPVLDAGGLDAFQRFVKRLPE-GCELRVC-N----VEFQPLRTMARAGIQPIPGRLAFFPNR 111 (118)
T ss_dssp TTCSEEEEEEEECCCBCHHHHHHHHHHHHHCCT-TCEEEEE-C----CCHHHHHHHHHTTCCCBTTTEEEESSH
T ss_pred CCCcEEEEEcCCCCeecHHHHHHHHHHHHHHHC-CCEEEEe-c----CCHHHHHHHHHcCChhhcChhhhcCCH
Confidence 5678999999 332221112112466666777 8888554 5 245677888989986 4334555543
No 232
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A*
Probab=69.50 E-value=2.1 Score=31.90 Aligned_cols=71 Identities=13% Similarity=0.275 Sum_probs=42.9
Q ss_pred hccCEEEEeE--E-EEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc--cCCCCeechHHHHHH
Q 022007 23 DSVDAFLFDC--V-IWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS--VSEDEIFSSSFAAAM 97 (304)
Q Consensus 23 ~~~k~i~fDi--t-L~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~--~~~~~i~~~~~~~~~ 97 (304)
...+.+++|+ | .+++ .-+..-.+..++++++|..++++ | ....+.+.|+..|+. +..+.++.+...+..
T Consensus 50 ~~~~~vvlDls~v~~iDs-sgl~~L~~~~~~~~~~g~~l~l~-~----~~~~v~~~l~~~gl~~~~~~~~i~~t~~~Al~ 123 (135)
T 4dgf_A 50 ETPKVFILRMRRVPVIDA-TGMHALWEFQESCEKRGTILLLS-G----VSDRLYGALNRFGFIEALGEERVFDHIDKALA 123 (135)
T ss_dssp SCCSEEEEECTTCSCBCH-HHHHHHHHHHHHHHHHTCEEEEE-S----CCHHHHHHHHHHTHHHHHCGGGBCSSHHHHHH
T ss_pred CCCcEEEEEcCCCCccCH-HHHHHHHHHHHHHHHCCCEEEEE-c----CCHHHHHHHHHcCChhhcCccceeCCHHHHHH
Confidence 4567888988 3 3332 22222246777788899998655 4 245667778877875 444556665555444
Q ss_pred HH
Q 022007 98 YL 99 (304)
Q Consensus 98 ~l 99 (304)
++
T Consensus 124 ~~ 125 (135)
T 4dgf_A 124 YA 125 (135)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 233
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=68.80 E-value=4.2 Score=40.73 Aligned_cols=44 Identities=14% Similarity=0.073 Sum_probs=36.3
Q ss_pred cCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 36 KGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 36 ~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
-.+.+-|++.++|++|++.|++++++|+ -.+.......+++|+.
T Consensus 532 i~Dp~R~ea~~aI~~l~~aGI~v~MiTG---D~~~TA~aIA~~lGI~ 575 (920)
T 1mhs_A 532 CMDPPRHDTYKTVCEAKTLGLSIKMLTG---DAVGIARETSRQLGLG 575 (920)
T ss_dssp CCCCCCHHHHHHHHHHHHHTCEEEEEES---SCHHHHHHHHHHHTSS
T ss_pred EeccccccHHHHHHHHhhcCceEEEEcC---CCHHHHHHHHHHcCCC
Confidence 3567888999999999999999999999 5666666666777874
No 234
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=67.80 E-value=47 Score=26.86 Aligned_cols=20 Identities=10% Similarity=0.159 Sum_probs=13.9
Q ss_pred HHHHHHHcCCCCCcEEEEcCC
Q 022007 231 MEILSKKFQIASSRMCMVGDR 251 (304)
Q Consensus 231 ~~~al~~lg~~~~~~~~IGD~ 251 (304)
...+++..|+ |+++.++|=+
T Consensus 202 ~~~al~~~g~-p~di~vig~d 221 (276)
T 3ksm_A 202 ALVAIRQSGM-SKQFGFIGFD 221 (276)
T ss_dssp HHHHHHHTTC-TTSSEEEEES
T ss_pred HHHHHHHcCC-CCCeEEEEeC
Confidence 5566778898 8887666643
No 235
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=63.93 E-value=16 Score=26.98 Aligned_cols=51 Identities=18% Similarity=0.170 Sum_probs=31.4
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHH----CCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRS----KGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~----~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++.|++|+ .-|--+-.++++++|+ ...|++++|. ....+......+.|.+
T Consensus 57 ~~DlillD~-----~MP~mdG~el~~~ir~~~~~~~ipvI~lTa---~~~~~~~~~~~~~Ga~ 111 (134)
T 3to5_A 57 DFDFVVTDW-----NMPGMQGIDLLKNIRADEELKHLPVLMITA---EAKREQIIEAAQAGVN 111 (134)
T ss_dssp CCSEEEEES-----CCSSSCHHHHHHHHHHSTTTTTCCEEEEES---SCCHHHHHHHHHTTCC
T ss_pred CCCEEEEcC-----CCCCCCHHHHHHHHHhCCCCCCCeEEEEEC---CCCHHHHHHHHHCCCC
Confidence 455555554 3333345788888886 3578999998 3434444455567775
No 236
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A*
Probab=63.08 E-value=11 Score=27.48 Aligned_cols=72 Identities=10% Similarity=0.055 Sum_probs=45.6
Q ss_pred ccCEEEEeE--E-EEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHHHHHHHHH
Q 022007 24 SVDAFLFDC--V-IWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSFAAAMYLK 100 (304)
Q Consensus 24 ~~k~i~fDi--t-L~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~~l~ 100 (304)
+.+.+++|+ | ..++. -...-....+.++..|.+++ ++| -..++.+.|..+|++...-.++.+-..+..++.
T Consensus 42 ~~~~vIlDlsgV~~iDs~-g~~~L~~~~~~~~l~G~~~~-l~G----i~p~va~~l~~~G~~l~~i~~~~~l~~Al~~l~ 115 (123)
T 3zxn_A 42 AGKGLVIDISALEVVDEF-VTRVLIEISRLAELLGLPFV-LTG----IKPAVAITLTEMGLDLRGMATALNLQKGLDKLK 115 (123)
T ss_dssp CCSEEEEECTTCSSCCHH-HHHHHHHHHHHHHHHTCCEE-EEC----CCHHHHHHHHHTTCCSTTSEEESSHHHHHHHHH
T ss_pred CCCEEEEEcCCCCcccHH-HHHHHHHHHHHHHHCCCEEE-EEc----CCHHHHHHHHHhCCCccceEEECCHHHHHHHHH
Confidence 578899999 3 33322 11112466777788898884 555 245678888899998655456666555555554
Q ss_pred h
Q 022007 101 V 101 (304)
Q Consensus 101 ~ 101 (304)
.
T Consensus 116 ~ 116 (123)
T 3zxn_A 116 N 116 (123)
T ss_dssp H
T ss_pred H
Confidence 3
No 237
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=61.85 E-value=14 Score=29.03 Aligned_cols=37 Identities=14% Similarity=0.150 Sum_probs=26.9
Q ss_pred EcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHH
Q 022007 35 WKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQ 71 (304)
Q Consensus 35 ~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~ 71 (304)
.....--+...++++.++++|.+++.+|++..-+...
T Consensus 123 iS~SG~t~~~~~~~~~ak~~g~~vI~IT~~~~s~L~~ 159 (198)
T 2xbl_A 123 YSTSGKSPNILAAFREAKAKGMTCVGFTGNRGGEMRE 159 (198)
T ss_dssp ECSSSCCHHHHHHHHHHHHTTCEEEEEECSCCCTHHH
T ss_pred EeCCCCCHHHHHHHHHHHHCCCeEEEEECCCCCcHHH
Confidence 3333444668899999999999999999965545443
No 238
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=61.81 E-value=3.6 Score=36.61 Aligned_cols=24 Identities=21% Similarity=0.152 Sum_probs=21.0
Q ss_pred CccHHHHHHHHHHCCCcEEEEeCCC
Q 022007 41 IDGVRQTLDVLRSKGKKLIFVTNNS 65 (304)
Q Consensus 41 ~~~a~eal~~L~~~G~~~~i~Tn~s 65 (304)
-||+.++|+.+. +++.++|.|.++
T Consensus 77 RPg~~eFL~~l~-~~yeivI~Tas~ 100 (372)
T 3ef0_A 77 RPGLAQFLQKIS-ELYELHIYTMGT 100 (372)
T ss_dssp CTTHHHHHHHHH-TTEEEEEECSSC
T ss_pred CcCHHHHHHHHh-cCcEEEEEeCCc
Confidence 589999999998 789999999843
No 239
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=61.39 E-value=67 Score=26.36 Aligned_cols=23 Identities=17% Similarity=0.261 Sum_probs=13.5
Q ss_pred hHHHHHHHHHhCCCCCCCeEEEEc
Q 022007 91 SSFAAAMYLKVNNFPQENKVYVIG 114 (304)
Q Consensus 91 ~~~~~~~~l~~~~~~~~~~v~~~g 114 (304)
.+..++++|.+.+.. .+++.+++
T Consensus 120 ~g~~a~~~l~~~g~~-~~~i~~i~ 142 (304)
T 3gbv_A 120 SGYFAARMLMLLAVN-DREIVIFR 142 (304)
T ss_dssp HHHHHHHHHHHHSTT-CSEEEEEE
T ss_pred HHHHHHHHHHHHhCC-CCeEEEEE
Confidence 355566788776542 24666664
No 240
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=58.80 E-value=28 Score=27.65 Aligned_cols=93 Identities=10% Similarity=-0.064 Sum_probs=52.6
Q ss_pred CHHHHHHHHHHHHcCCCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcE
Q 022007 166 NYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRM 245 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~ 245 (304)
+..++..++...++..+...+++.+.. ..+ ...+...++.+...+.--+++=.+.+++.+-- ..--
T Consensus 79 s~~Dil~al~~a~~~~~kIavvg~~~~---------~~~----~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~-~G~~ 144 (196)
T 2q5c_A 79 TRFDTMRAVYNAKRFGNELALIAYKHS---------IVD----KHEIEAMLGVKIKEFLFSSEDEITTLISKVKT-ENIK 144 (196)
T ss_dssp CHHHHHHHHHHHGGGCSEEEEEEESSC---------SSC----HHHHHHHHTCEEEEEEECSGGGHHHHHHHHHH-TTCC
T ss_pred CHhHHHHHHHHHHhhCCcEEEEeCcch---------hhH----HHHHHHHhCCceEEEEeCCHHHHHHHHHHHHH-CCCe
Confidence 466777777777765343455665444 111 24456666655432211122222333333311 1223
Q ss_pred EEEcCCchhhHHHHHHcCCeEEEEccCCC
Q 022007 246 CMVGDRLDTDILFGQNAGCKTLLVLSGVT 274 (304)
Q Consensus 246 ~~IGD~~~~Di~~a~~aG~~ti~V~~G~~ 274 (304)
+.|||.+ . ...|++.|++++++.+|..
T Consensus 145 vvVG~~~-~-~~~A~~~Gl~~vli~sg~e 171 (196)
T 2q5c_A 145 IVVSGKT-V-TDEAIKQGLYGETINSGEE 171 (196)
T ss_dssp EEEECHH-H-HHHHHHTTCEEEECCCCHH
T ss_pred EEECCHH-H-HHHHHHcCCcEEEEecCHH
Confidence 5999993 3 7889999999999988753
No 241
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=58.39 E-value=77 Score=26.11 Aligned_cols=38 Identities=16% Similarity=0.016 Sum_probs=19.7
Q ss_pred HHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcC-C-eEEEE
Q 022007 231 MEILSKKFQIASSRMCMVGDRLDTDILFGQNAG-C-KTLLV 269 (304)
Q Consensus 231 ~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG-~-~ti~V 269 (304)
...+++..|+. +++.+||=+-..+....-..| + .|+..
T Consensus 202 ~~~al~~~g~~-~di~vig~d~~~~~~~~~~~~~l~ttv~~ 241 (305)
T 3g1w_A 202 VGDAVRLESRA-GEIQIISFDTDKGTLDLVDEGIISATLAQ 241 (305)
T ss_dssp HHHHHHHTTCT-TTSEEEEESCCHHHHHHHHTTSSCEEEEE
T ss_pred HHHHHHhcCCC-CCeEEEEeCCCHHHHHHHHcCceEEEEec
Confidence 55667788887 765555533012233333334 3 56654
No 242
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=58.19 E-value=72 Score=25.69 Aligned_cols=21 Identities=5% Similarity=-0.230 Sum_probs=13.4
Q ss_pred HHHHHHHHcCCCCCcEEEEcC
Q 022007 230 MMEILSKKFQIASSRMCMVGD 250 (304)
Q Consensus 230 ~~~~al~~lg~~~~~~~~IGD 250 (304)
....+++..|+-|+++.++|=
T Consensus 194 g~~~al~~~g~vp~di~vvg~ 214 (272)
T 3o74_A 194 GVFDTLQARPVDSRQLQLGTF 214 (272)
T ss_dssp HHHHHHHTSCGGGCCCEEEEE
T ss_pred HHHHHHHHcCCCccceEEEEe
Confidence 355667777865677666653
No 243
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=57.63 E-value=12 Score=29.53 Aligned_cols=32 Identities=9% Similarity=0.061 Sum_probs=24.9
Q ss_pred EEcCCccCccHHHHHHHHHHCCCcEEEEeCCC
Q 022007 34 IWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNS 65 (304)
Q Consensus 34 L~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s 65 (304)
+.....--+...++++.++++|.+++.+|++.
T Consensus 119 ~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~ 150 (199)
T 1x92_A 119 AISTSGNSANVIQAIQAAHDREMLVVALTGRD 150 (199)
T ss_dssp EECSSSCCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred EEeCCCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 34444556667899999999999999999953
No 244
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=57.55 E-value=16 Score=28.34 Aligned_cols=33 Identities=12% Similarity=0.081 Sum_probs=24.7
Q ss_pred cCCccCccHHHHHHHHHHCCCcEEEEeCCCCcC
Q 022007 36 KGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRS 68 (304)
Q Consensus 36 ~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~ 68 (304)
...+--+...++++.++++|.+++.+|++..-+
T Consensus 95 S~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~ 127 (187)
T 3sho_A 95 SVWRYLRDTVAALAGAAERGVPTMALTDSSVSP 127 (187)
T ss_dssp CCSSCCHHHHHHHHHHHHTTCCEEEEESCTTSH
T ss_pred eCCCCCHHHHHHHHHHHHCCCCEEEEeCCCCCc
Confidence 333445667899999999999999999854433
No 245
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=57.26 E-value=77 Score=25.73 Aligned_cols=65 Identities=17% Similarity=0.225 Sum_probs=34.6
Q ss_pred HHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCcc-C---------CCCee----chHHHHHHHHHhCCCCCCCeE
Q 022007 45 RQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSV-S---------EDEIF----SSSFAAAMYLKVNNFPQENKV 110 (304)
Q Consensus 45 ~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~-~---------~~~i~----~~~~~~~~~l~~~~~~~~~~v 110 (304)
.+.++.+.+++.--+|+..... ....+.+.+.|+++ . ...|. ..+..+.++|.+.|. +++
T Consensus 53 ~~~~~~l~~~~vdgiIi~~~~~---~~~~~~l~~~~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~---~~I 126 (276)
T 3jy6_A 53 KTLLRAIGSRGFDGLILQSFSN---PQTVQEILHQQMPVVSVDREMDACPWPQVVTDNFEAAKAATTAFRQQGY---QHV 126 (276)
T ss_dssp HHHHHHHHTTTCSEEEEESSCC---HHHHHHHHTTSSCEEEESCCCTTCSSCEEECCHHHHHHHHHHHHHTTTC---CEE
T ss_pred HHHHHHHHhCCCCEEEEecCCc---HHHHHHHHHCCCCEEEEecccCCCCCCEEEEChHHHHHHHHHHHHHcCC---CeE
Confidence 4566666666666656555322 45555666666651 1 01122 235556678877664 356
Q ss_pred EEEcC
Q 022007 111 YVIGG 115 (304)
Q Consensus 111 ~~~g~ 115 (304)
.+++.
T Consensus 127 ~~i~~ 131 (276)
T 3jy6_A 127 VVLTS 131 (276)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 55443
No 246
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=57.20 E-value=11 Score=29.41 Aligned_cols=34 Identities=6% Similarity=-0.068 Sum_probs=23.7
Q ss_pred EcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcC
Q 022007 35 WKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRS 68 (304)
Q Consensus 35 ~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~ 68 (304)
.....--+...++++.++++|.+++.+|++..-+
T Consensus 117 iS~sG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~ 150 (188)
T 1tk9_A 117 ISTSGKSPNVLEALKKAKELNMLCLGLSGKGGGM 150 (188)
T ss_dssp ECSSSCCHHHHHHHHHHHHTTCEEEEEEEGGGTT
T ss_pred EeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCcc
Confidence 3333444667888888888999888888854333
No 247
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=56.33 E-value=14 Score=28.57 Aligned_cols=32 Identities=16% Similarity=0.159 Sum_probs=24.6
Q ss_pred EcCCccCccHHHHHHHHHHCCCcEEEEeCCCC
Q 022007 35 WKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSR 66 (304)
Q Consensus 35 ~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~ 66 (304)
.....--+...++++.++++|.+++.+|++..
T Consensus 103 iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~ 134 (183)
T 2xhz_A 103 ISNSGESSEITALIPVLKRLHVPLICITGRPE 134 (183)
T ss_dssp ECSSSCCHHHHHHHHHHHTTTCCEEEEESCTT
T ss_pred EeCCCCCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 34444556678999999999999999999543
No 248
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=55.60 E-value=84 Score=25.69 Aligned_cols=20 Identities=5% Similarity=-0.059 Sum_probs=13.5
Q ss_pred HHHHHHHHcCCC-CCcEEEEc
Q 022007 230 MMEILSKKFQIA-SSRMCMVG 249 (304)
Q Consensus 230 ~~~~al~~lg~~-~~~~~~IG 249 (304)
....+++..|+. |+++.+||
T Consensus 200 g~~~al~~~g~~vP~di~vvg 220 (291)
T 3egc_A 200 GAMQALNVLGLRYGPDVEIVS 220 (291)
T ss_dssp HHHHHHHHHTCCBTTTBEEEE
T ss_pred HHHHHHHHcCCCCCCceEEEE
Confidence 355667778886 67766665
No 249
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=54.74 E-value=21 Score=29.38 Aligned_cols=36 Identities=17% Similarity=0.274 Sum_probs=25.2
Q ss_pred HHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 44 VRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 44 a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
-.++++++++.+.+++++|. ....+.....-+.|.+
T Consensus 63 G~~~~~~lr~~~~pvi~lt~---~~~~~~~~~a~~~Ga~ 98 (259)
T 3luf_A 63 SGEAVKVLLERGLPVVILTA---DISEDKREAWLEAGVL 98 (259)
T ss_dssp TSHHHHHHHHTTCCEEEEEC---C-CHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCCEEEEEc---cCCHHHHHHHHHCCCc
Confidence 35788888888999999998 3334444445567765
No 250
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=53.89 E-value=33 Score=24.99 Aligned_cols=51 Identities=12% Similarity=0.198 Sum_probs=30.5
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHH----CCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRS----KGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~----~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++++++|+.+ +-.+..+.++.+++ .+.+++++|.. ..........+.|.+
T Consensus 59 ~~dliilD~~l-----~~~~g~~~~~~lr~~~~~~~~pii~~t~~---~~~~~~~~~~~~g~~ 113 (152)
T 3heb_A 59 RAQLVLLDLNL-----PDMTGIDILKLVKENPHTRRSPVVILTTT---DDQREIQRCYDLGAN 113 (152)
T ss_dssp CBEEEEECSBC-----SSSBHHHHHHHHHHSTTTTTSCEEEEESC---CCHHHHHHHHHTTCS
T ss_pred CCCEEEEeCCC-----CCCcHHHHHHHHHhcccccCCCEEEEecC---CCHHHHHHHHHCCCc
Confidence 45666666522 22346788888887 35789999983 333334444456654
No 251
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=53.48 E-value=31 Score=24.07 Aligned_cols=37 Identities=22% Similarity=0.157 Sum_probs=24.0
Q ss_pred cHHHHHHHHHHC----CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 43 GVRQTLDVLRSK----GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 43 ~a~eal~~L~~~----G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
+..+.++++++. ..+++++|+. ..........+.|.+
T Consensus 60 ~g~~~~~~l~~~~~~~~~pii~~s~~---~~~~~~~~~~~~Ga~ 100 (122)
T 3gl9_A 60 DGFTVLKKLQEKEEWKRIPVIVLTAK---GGEEDESLALSLGAR 100 (122)
T ss_dssp CHHHHHHHHHTSTTTTTSCEEEEESC---CSHHHHHHHHHTTCS
T ss_pred cHHHHHHHHHhcccccCCCEEEEecC---CchHHHHHHHhcChh
Confidence 457888888864 5788999983 333444444556654
No 252
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=53.33 E-value=70 Score=25.92 Aligned_cols=22 Identities=5% Similarity=0.246 Sum_probs=14.8
Q ss_pred HHHHHHHHcCCC-CCcEEEEcCC
Q 022007 230 MMEILSKKFQIA-SSRMCMVGDR 251 (304)
Q Consensus 230 ~~~~al~~lg~~-~~~~~~IGD~ 251 (304)
....+++.+|+. |+++.+||=+
T Consensus 191 g~~~al~~~g~~vP~di~vig~d 213 (277)
T 3e61_A 191 NVLGIVQRYHFKVPAEIQIIGYD 213 (277)
T ss_dssp HHHHHHHHTTCCTTTTCEEECSB
T ss_pred HHHHHHHHcCCCCCCceEEEeeC
Confidence 355667778876 6787777643
No 253
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A
Probab=53.05 E-value=33 Score=23.86 Aligned_cols=53 Identities=6% Similarity=0.169 Sum_probs=33.8
Q ss_pred cCEEEEeE--EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 25 VDAFLFDC--VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 25 ~k~i~fDi--tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.+.+++|+ +-+-+..-+.--.++.+.++++|..+.+ +| ....+.+.|+..|++
T Consensus 43 ~~~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l-~~----~~~~v~~~l~~~gl~ 97 (116)
T 1th8_B 43 IRHIVLNLGQLTFMDSSGLGVILGRYKQIKNVGGQMVV-CA----VSPAVKRLFDMSGLF 97 (116)
T ss_dssp CCEEEEEEEEEEEECHHHHHHHHHHHHHHHHTTCCEEE-ES----CCHHHHHHHHHHTGG
T ss_pred CcEEEEECCCCcEEccHHHHHHHHHHHHHHHhCCeEEE-Ee----CCHHHHHHHHHhCCc
Confidence 68899999 3332222222224677778889998854 55 235677777777876
No 254
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A
Probab=52.25 E-value=40 Score=23.56 Aligned_cols=63 Identities=11% Similarity=0.149 Sum_probs=39.2
Q ss_pred ccCEEEEeE--E-EEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHHH
Q 022007 24 SVDAFLFDC--V-IWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSFA 94 (304)
Q Consensus 24 ~~k~i~fDi--t-L~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~~ 94 (304)
..+.+++|+ + .+++.. +.--..+.+.++++|.++.+ +| ....+.+.|+..|++-.. ++.+...
T Consensus 41 ~~~~vvlDls~v~~iDssg-l~~L~~~~~~~~~~g~~l~l-~~----~~~~v~~~l~~~gl~~~~--i~~~~~~ 106 (117)
T 1h4x_A 41 AVTTIIWNFERLSFMDSSG-VGLVLGRMRELEAVAGRTIL-LN----PSPTMRKVFQFSGLGPWM--MDATEEE 106 (117)
T ss_dssp SCSEEEEEEEEEEEECTHH-HHHHHHHHHHHHTTTCEEEE-ES----CCHHHHHHHHHTTCGGGE--ECSCHHH
T ss_pred CCCEEEEECCCCcEechHH-HHHHHHHHHHHHHcCCEEEE-Ee----CCHHHHHHHHHhCCceEE--EeCCHHH
Confidence 468899999 3 444332 22124667778888988865 44 244677888888887332 4444433
No 255
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A
Probab=52.13 E-value=3.6 Score=32.55 Aligned_cols=41 Identities=22% Similarity=0.357 Sum_probs=28.1
Q ss_pred cCEEEEeE-EEEcCCccCc---------------------cHHHHHHHHHHCCCcEEEEeCCC
Q 022007 25 VDAFLFDC-VIWKGDKLID---------------------GVRQTLDVLRSKGKKLIFVTNNS 65 (304)
Q Consensus 25 ~k~i~fDi-tL~~~~~~~~---------------------~a~eal~~L~~~G~~~~i~Tn~s 65 (304)
.+.+++|+ |+|-.+..+. ...+.+..|++...+++++||..
T Consensus 74 ~~~VLvDclt~wl~n~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~vlVsNEV 136 (180)
T 1c9k_A 74 DDAILLECITTMVTNLLFALGGENDPEQWDYAAMERAIDDEIQILIAACQRCPAKVVLVTNEV 136 (180)
T ss_dssp TCEEEEECHHHHHHHHHHHC----CTTSCCHHHHHHHHHHHHHHHHHHHHHCCSEEEEECCCC
T ss_pred CCeEEEcCHHHHHHHHHhhcccccccccccchhhHHHHHHHHHHHHHHHHccCCCEEEEEccc
Confidence 47899999 8774332211 11345778888899999999943
No 256
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=51.71 E-value=6.1 Score=28.98 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=24.0
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHCCCcEEEEeCCC
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNS 65 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s 65 (304)
+++.+++|+.+ +--+-.+.++.+++.++|++++|+.+
T Consensus 53 ~~DlvllDi~m-----P~~~G~el~~~lr~~~ipvI~lTa~~ 89 (123)
T 2lpm_A 53 QFDIAIIDVNL-----DGEPSYPVADILAERNVPFIFATGYG 89 (123)
T ss_dssp CSSEEEECSSS-----SSCCSHHHHHHHHHTCCSSCCBCTTC
T ss_pred CCCEEEEecCC-----CCCCHHHHHHHHHcCCCCEEEEecCc
Confidence 45666666522 11123577888888889998898843
No 257
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=51.47 E-value=49 Score=23.30 Aligned_cols=37 Identities=19% Similarity=0.266 Sum_probs=22.9
Q ss_pred cHHHHHHHHHHC---CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 43 GVRQTLDVLRSK---GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 43 ~a~eal~~L~~~---G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
+..+.++.+++. ..+++++|+. ..........+.|.+
T Consensus 66 ~g~~~~~~l~~~~~~~~~ii~~s~~---~~~~~~~~~~~~g~~ 105 (136)
T 3hdv_A 66 SGLDLIRTIRASERAALSIIVVSGD---TDVEEAVDVMHLGVV 105 (136)
T ss_dssp CHHHHHHHHHTSTTTTCEEEEEESS---CCHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHhcCCCCCCEEEEeCC---CChHHHHHHHhCCcc
Confidence 467888888875 3678888873 333334444456654
No 258
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=51.14 E-value=20 Score=27.73 Aligned_cols=30 Identities=17% Similarity=0.057 Sum_probs=23.7
Q ss_pred cCCccCccHHHHHHHHHHCCCcEEEEeCCC
Q 022007 36 KGDKLIDGVRQTLDVLRSKGKKLIFVTNNS 65 (304)
Q Consensus 36 ~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s 65 (304)
....-.+...++++.++++|.+++.+|++.
T Consensus 87 S~sG~t~~~~~~~~~ak~~g~~vi~IT~~~ 116 (186)
T 1m3s_A 87 SGSGETKSLIHTAAKAKSLHGIVAALTINP 116 (186)
T ss_dssp CSSSCCHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred cCCCCcHHHHHHHHHHHHCCCEEEEEECCC
Confidence 333444668899999999999999999954
No 259
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=51.09 E-value=16 Score=28.95 Aligned_cols=33 Identities=21% Similarity=0.166 Sum_probs=25.5
Q ss_pred EEcCCccCccHHHHHHHHHHCCCcEEEEeCCCC
Q 022007 34 IWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSR 66 (304)
Q Consensus 34 L~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~ 66 (304)
+.....--+...++++.++++|.+++.+|++..
T Consensus 95 ~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~ 127 (200)
T 1vim_A 95 GISGSGETTSVVNISKKAKDIGSKLVAVTGKRD 127 (200)
T ss_dssp EECSSSCCHHHHHHHHHHHHHTCEEEEEESCTT
T ss_pred EEeCCCCcHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 334445556788999999999999999999543
No 260
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=50.80 E-value=56 Score=23.59 Aligned_cols=37 Identities=27% Similarity=0.341 Sum_probs=23.7
Q ss_pred cHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 43 GVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 43 ~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
...+.++.+++. ..+++++|+ ...........+.|.+
T Consensus 80 ~g~~~~~~l~~~~~~~~ii~ls~---~~~~~~~~~~~~~g~~ 118 (150)
T 4e7p_A 80 TGLEVLEWIRSEKLETKVVVVTT---FKRAGYFERAVKAGVD 118 (150)
T ss_dssp CHHHHHHHHHHTTCSCEEEEEES---CCCHHHHHHHHHTTCS
T ss_pred cHHHHHHHHHHhCCCCeEEEEeC---CCCHHHHHHHHHCCCc
Confidence 467888888875 467888887 3333444444456654
No 261
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=50.57 E-value=48 Score=23.48 Aligned_cols=37 Identities=14% Similarity=0.108 Sum_probs=23.2
Q ss_pred cHHHHHHHHHH----CCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 43 GVRQTLDVLRS----KGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 43 ~a~eal~~L~~----~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
...+.++.+++ ...+++++|+. ..........+.|.+
T Consensus 68 ~g~~~~~~l~~~~~~~~~~ii~~s~~---~~~~~~~~~~~~g~~ 108 (143)
T 3cnb_A 68 DGFSICHRIKSTPATANIIVIAMTGA---LTDDNVSRIVALGAE 108 (143)
T ss_dssp CHHHHHHHHHTSTTTTTSEEEEEESS---CCHHHHHHHHHTTCS
T ss_pred cHHHHHHHHHhCccccCCcEEEEeCC---CCHHHHHHHHhcCCc
Confidence 45788888887 35678888883 333333444456654
No 262
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=50.49 E-value=50 Score=24.12 Aligned_cols=50 Identities=14% Similarity=-0.025 Sum_probs=28.4
Q ss_pred cCEEEEeEEEEcCCccCccHHHHHHHHHHC----CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 25 VDAFLFDCVIWKGDKLIDGVRQTLDVLRSK----GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 25 ~k~i~fDitL~~~~~~~~~a~eal~~L~~~----G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
++++++|+ .-+-.+..+.++.|++. ..+++++|+. ..........+.|.+
T Consensus 52 ~dlii~D~-----~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~---~~~~~~~~~~~~g~~ 105 (154)
T 3gt7_A 52 PDLIISDV-----LMPEMDGYALCRWLKGQPDLRTIPVILLTIL---SDPRDVVRSLECGAD 105 (154)
T ss_dssp CSEEEEES-----CCSSSCHHHHHHHHHHSTTTTTSCEEEEECC---CSHHHHHHHHHHCCS
T ss_pred CCEEEEeC-----CCCCCCHHHHHHHHHhCCCcCCCCEEEEECC---CChHHHHHHHHCCCC
Confidence 45555554 22223467888888874 5788888873 333333344445554
No 263
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=49.46 E-value=1.6 Score=34.54 Aligned_cols=28 Identities=21% Similarity=0.298 Sum_probs=19.5
Q ss_pred ccCEEEEeE--EEEcCCccCc-cHHHHHHHH
Q 022007 24 SVDAFLFDC--VIWKGDKLID-GVRQTLDVL 51 (304)
Q Consensus 24 ~~k~i~fDi--tL~~~~~~~~-~a~eal~~L 51 (304)
.+|+|+||+ ||++....+. ...++++++
T Consensus 5 ~~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~ 35 (225)
T 3d6j_A 5 KYTVYLFDFDYTLADSSRGIVTCFRSVLERH 35 (225)
T ss_dssp CCSEEEECCBTTTEECHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCCCCCHHHHHHHHHHHHHHh
Confidence 479999999 9998775443 344555443
No 264
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=49.10 E-value=32 Score=24.75 Aligned_cols=37 Identities=14% Similarity=0.251 Sum_probs=23.9
Q ss_pred cHHHHHHHHHH----CCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 43 GVRQTLDVLRS----KGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 43 ~a~eal~~L~~----~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
+..+.++.|++ .+.+++++|+ ...........+.|.+
T Consensus 65 ~g~~~~~~lr~~~~~~~~pii~~s~---~~~~~~~~~~~~~ga~ 105 (144)
T 3kht_A 65 NGFEVMSAVRKPGANQHTPIVILTD---NVSDDRAKQCMAAGAS 105 (144)
T ss_dssp CHHHHHHHHHSSSTTTTCCEEEEET---TCCHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHhcccccCCCEEEEeC---CCCHHHHHHHHHcCCC
Confidence 46788899887 3578899998 3333334444456654
No 265
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=48.89 E-value=33 Score=24.19 Aligned_cols=51 Identities=14% Similarity=0.146 Sum_probs=29.7
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHC----CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK----GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~----G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++++++|+ .-+-....+.++.+++. ..+++++|+.. .........+.|.+
T Consensus 55 ~~dlvi~d~-----~~~~~~g~~~~~~l~~~~~~~~~pii~ls~~~---~~~~~~~~~~~g~~ 109 (140)
T 1k68_A 55 RPDLILLXL-----NLPKKDGREVLAEIKSDPTLKRIPVVVLSTSI---NEDDIFHSYDLHVN 109 (140)
T ss_dssp CCSEEEECS-----SCSSSCHHHHHHHHHHSTTGGGSCEEEEESCC---CHHHHHHHHHTTCS
T ss_pred CCcEEEEec-----CCCcccHHHHHHHHHcCcccccccEEEEecCC---cHHHHHHHHHhchh
Confidence 356666655 21223457888888874 57899999832 23333344455654
No 266
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=48.58 E-value=22 Score=27.83 Aligned_cols=31 Identities=3% Similarity=0.051 Sum_probs=23.5
Q ss_pred EEcCCccCccHHHHHHHHHHCCCcEEEEeCC
Q 022007 34 IWKGDKLIDGVRQTLDVLRSKGKKLIFVTNN 64 (304)
Q Consensus 34 L~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~ 64 (304)
+.....--+...++++.++++|.+++.+|++
T Consensus 115 ~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~ 145 (196)
T 2yva_A 115 AISTRGNSRDIVKAVEAAVTRDMTIVALTGY 145 (196)
T ss_dssp EECSSSCCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred EEeCCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3444445566788999999999999999984
No 267
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=48.44 E-value=3 Score=33.78 Aligned_cols=32 Identities=19% Similarity=0.392 Sum_probs=23.6
Q ss_pred cCEEEEeE--EEEcCCccCc-cHHHHHHHHHHCCC
Q 022007 25 VDAFLFDC--VIWKGDKLID-GVRQTLDVLRSKGK 56 (304)
Q Consensus 25 ~k~i~fDi--tL~~~~~~~~-~a~eal~~L~~~G~ 56 (304)
+|+|+||+ ||++....+. ...++++++...|+
T Consensus 2 ~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~ 36 (241)
T 2hoq_A 2 VKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGL 36 (241)
T ss_dssp CCEEEECSBTTTBCHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccEEEEcCCCCCCCChhhHHHHHHHHHHHHHHccc
Confidence 68999999 9998776544 34677777766553
No 268
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=48.09 E-value=16 Score=31.72 Aligned_cols=55 Identities=15% Similarity=0.224 Sum_probs=40.0
Q ss_pred ccCEEEEeE--EEEcCCc--------cCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDC--VIWKGDK--------LIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDi--tL~~~~~--------~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
..+++++|+ ||+.... .-|++.++|+.+. +.+.++|.|.+ .+......+..++..
T Consensus 139 ~k~tLVLDLDeTLvh~~~~~~~~~~~~RP~l~eFL~~l~-~~yeivIfTas---~~~ya~~vld~Ld~~ 203 (320)
T 3shq_A 139 GKKLLVLDIDYTLFDHRSPAETGTELMRPYLHEFLTSAY-EDYDIVIWSAT---SMRWIEEKMRLLGVA 203 (320)
T ss_dssp TCEEEEECCBTTTBCSSSCCSSHHHHBCTTHHHHHHHHH-HHEEEEEECSS---CHHHHHHHHHHTTCT
T ss_pred CCcEEEEeccccEEcccccCCCcceEeCCCHHHHHHHHH-hCCEEEEEcCC---cHHHHHHHHHHhCCC
Confidence 357999999 9986542 5789999999998 56999999983 344444455556543
No 269
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=47.86 E-value=1.2e+02 Score=25.07 Aligned_cols=37 Identities=8% Similarity=0.099 Sum_probs=21.2
Q ss_pred HHHHHHHHcCCC-CCcEEEEcCCchhhHHHHHHc--CCeEEEE
Q 022007 230 MMEILSKKFQIA-SSRMCMVGDRLDTDILFGQNA--GCKTLLV 269 (304)
Q Consensus 230 ~~~~al~~lg~~-~~~~~~IGD~~~~Di~~a~~a--G~~ti~V 269 (304)
....+++..|+. |+++-+||=+ |...+... .+.|+..
T Consensus 211 g~~~al~~~G~~vP~di~vig~D---~~~~~~~~~p~lttv~~ 250 (303)
T 3kke_A 211 GALSTALRLGLRVPEDLSIVGIN---TTWVSDTVYPALTTVRL 250 (303)
T ss_dssp HHHHHHHHTTCCTTTTCEEEEES---CCHHHHHSSSCCEEEEC
T ss_pred HHHHHHHHcCCCCCCceEEEEEc---ChhHhhcCCCCeeEEec
Confidence 355677788886 7787776633 22344444 3555443
No 270
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum}
Probab=46.97 E-value=27 Score=24.58 Aligned_cols=56 Identities=9% Similarity=0.111 Sum_probs=34.2
Q ss_pred hhccCEEEEeE--EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 22 FDSVDAFLFDC--VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 22 ~~~~k~i~fDi--tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
+..-..+++|+ |-+-+..-+---..+.+.++++|.++.++ | ....+.+.|+..|++
T Consensus 39 ~~~~~~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~-~----~~~~v~~~l~~~gl~ 96 (117)
T 4hyl_A 39 VTAKGKMILDLREVSYMSSAGLRVLLSLYRHTSNQQGALVLV-G----VSEEIRDTMEITGFW 96 (117)
T ss_dssp CCTTCEEEEEEEEEEEECHHHHHHHHHHHHHHHHTTCEEEEE-C----CCHHHHHHHHHHTCG
T ss_pred HccCCeEEEECCCCcEEcHHHHHHHHHHHHHHHHcCCEEEEE-e----CCHHHHHHHHHhCcc
Confidence 33334889999 43322221211246677788899887654 5 245677778888886
No 271
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=46.25 E-value=56 Score=23.10 Aligned_cols=50 Identities=14% Similarity=0.004 Sum_probs=29.3
Q ss_pred EeEEEEcCCccC--ccHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 30 FDCVIWKGDKLI--DGVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 30 fDitL~~~~~~~--~~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
+|++|++-.-+- ....+.++.+++. ..+++++|+. ..........+.|.+
T Consensus 51 ~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~~s~~---~~~~~~~~~~~~ga~ 104 (136)
T 3kto_A 51 AIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIVMASS---SDIPTAVRAMRASAA 104 (136)
T ss_dssp EEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEEESS---CCHHHHHHHHHTTCS
T ss_pred CCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEEEEcC---CCHHHHHHHHHcChH
Confidence 455555444333 3457888888876 4788999983 333333333456654
No 272
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=45.71 E-value=43 Score=23.53 Aligned_cols=50 Identities=14% Similarity=0.121 Sum_probs=28.1
Q ss_pred cCEEEEeEEEEcCCccCccHHHHHHHHHHC----CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 25 VDAFLFDCVIWKGDKLIDGVRQTLDVLRSK----GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 25 ~k~i~fDitL~~~~~~~~~a~eal~~L~~~----G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
++.+++|+ .-+--+..+.++.+++. ..+++++|+. ..........+.|.+
T Consensus 52 ~dlvi~D~-----~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~---~~~~~~~~~~~~g~~ 105 (129)
T 3h1g_A 52 TKVLITDW-----NMPEMNGLDLVKKVRSDSRFKEIPIIMITAE---GGKAEVITALKAGVN 105 (129)
T ss_dssp CCEEEECS-----CCSSSCHHHHHHHHHTSTTCTTCCEEEEESC---CSHHHHHHHHHHTCC
T ss_pred CCEEEEeC-----CCCCCCHHHHHHHHHhcCCCCCCeEEEEeCC---CChHHHHHHHHcCcc
Confidence 55555554 22222457888888863 4688899983 333333333445554
No 273
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=45.01 E-value=39 Score=23.72 Aligned_cols=23 Identities=22% Similarity=0.144 Sum_probs=17.7
Q ss_pred ccHHHHHHHHHHC----CCcEEEEeCC
Q 022007 42 DGVRQTLDVLRSK----GKKLIFVTNN 64 (304)
Q Consensus 42 ~~a~eal~~L~~~----G~~~~i~Tn~ 64 (304)
.+..+.++.+++. +.+++++|+.
T Consensus 60 ~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 60 MDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp SCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred CCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 3467888888875 6788999984
No 274
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=44.71 E-value=24 Score=27.08 Aligned_cols=31 Identities=10% Similarity=0.137 Sum_probs=23.7
Q ss_pred EcCCccCccHHHHHHHHHHCCCcEEEEeCCC
Q 022007 35 WKGDKLIDGVRQTLDVLRSKGKKLIFVTNNS 65 (304)
Q Consensus 35 ~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s 65 (304)
....+--+...++++.++++|.+++.+|++.
T Consensus 89 iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~ 119 (180)
T 1jeo_A 89 ISGSGRTESVLTVAKKAKNINNNIIAIVCEC 119 (180)
T ss_dssp EESSSCCHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred EeCCCCcHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3333444667899999999999999999853
No 275
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=44.52 E-value=13 Score=31.17 Aligned_cols=28 Identities=7% Similarity=-0.116 Sum_probs=21.0
Q ss_pred CCCHHHHHHHHHHHHcCCCce-EEEecCCC
Q 022007 164 HINYYKLQYGTLCIRENPGCL-FIATNRDA 192 (304)
Q Consensus 164 ~~~~~~~~~~l~~l~~~~~~~-~i~tn~~~ 192 (304)
...++++.+.++.|+++ |.+ .++||...
T Consensus 162 ~~~~~g~~~~l~~L~~~-g~~~~i~T~~~~ 190 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRM-GIKVGMITGDNW 190 (287)
T ss_dssp CCBCTTHHHHHHHHHHT-TCEEEEECSSCH
T ss_pred cccchhHHHHHHHHHHC-CCeEEEEeCCCH
Confidence 34578899999999887 665 67788654
No 276
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=44.52 E-value=1.3e+02 Score=24.72 Aligned_cols=22 Identities=5% Similarity=-0.004 Sum_probs=14.8
Q ss_pred HHHHHHHHcCCC-CCcEEEEcCC
Q 022007 230 MMEILSKKFQIA-SSRMCMVGDR 251 (304)
Q Consensus 230 ~~~~al~~lg~~-~~~~~~IGD~ 251 (304)
....+++..|+. |+++-+||=+
T Consensus 216 g~~~al~~~g~~vP~di~vig~D 238 (305)
T 3huu_A 216 QLLNVLYEYQLRIPEDIQTATFN 238 (305)
T ss_dssp HHHHHHHHTTCCTTTTCEEEEES
T ss_pred HHHHHHHHcCCCCCcceEEEEEC
Confidence 355667788876 6787776643
No 277
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=44.44 E-value=71 Score=22.45 Aligned_cols=37 Identities=14% Similarity=0.029 Sum_probs=21.9
Q ss_pred cHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 43 GVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 43 ~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
...+.++.+++. ..+++++|+ ...........+.|.+
T Consensus 66 ~g~~~~~~l~~~~~~~~ii~ls~---~~~~~~~~~~~~~g~~ 104 (140)
T 2qr3_A 66 EGLFWLHEIKRQYRDLPVVLFTA---YADIDLAVRGIKEGAS 104 (140)
T ss_dssp CHHHHHHHHHHHCTTCCEEEEEE---GGGHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHhhCcCCCEEEEEC---CCCHHHHHHHHHcCch
Confidence 356777777764 577888887 3333333444455554
No 278
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=44.44 E-value=1.4e+02 Score=24.89 Aligned_cols=74 Identities=9% Similarity=0.122 Sum_probs=40.6
Q ss_pred EeE-EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCC-ccCCCCeechHHHHHHHHHhC-CCC
Q 022007 30 FDC-VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGV-SVSEDEIFSSSFAAAMYLKVN-NFP 105 (304)
Q Consensus 30 fDi-tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~-~~~~~~i~~~~~~~~~~l~~~-~~~ 105 (304)
.|+ +++ |....+....|++.+++...+ +++|++.+.+...+-+.+.+.+. ..-.++-.+-+..+++|+.+. |+.
T Consensus 37 ~D~IVVL-G~~~~~Rl~~A~~L~~~g~~~-lIvSGG~g~~t~~~~~~v~~~~~y~~l~~~~~sEA~~m~~~l~~~~GVp 113 (266)
T 3ca8_A 37 ADCVILA-GNAVMPTIDAACKIARDQQIP-LLISGGIGHSTTFLYSAIAQHPHYNTIRTTGRAEATILADIAHQFWHIP 113 (266)
T ss_dssp CSEEEEE-SCCCHHHHHHHHHHHHHHTCC-EEEECCSSTTHHHHHHHHHTCTTGGGSCCTTSCHHHHHHHHHHHTTCCC
T ss_pred CCEEEEC-CCCchHHHHHHHHHHHcCCCc-EEEECCCCCcccchhhhhccccccccccCCCCCHHHHHHHHHHHhcCCC
Confidence 345 444 333334566777777776667 57999777766555555544321 110112234455666676664 553
No 279
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=44.20 E-value=69 Score=23.15 Aligned_cols=37 Identities=19% Similarity=0.253 Sum_probs=23.4
Q ss_pred cHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 43 GVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 43 ~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
...+.++.+++. ..+++++|+. ..........+.|.+
T Consensus 65 ~g~~~~~~l~~~~~~~~ii~ls~~---~~~~~~~~~~~~g~~ 103 (153)
T 3cz5_A 65 GGIEATRHIRQWDGAARILIFTMH---QGSAFALKAFEAGAS 103 (153)
T ss_dssp CHHHHHHHHHHHCTTCCEEEEESC---CSHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHhCCCCeEEEEECC---CCHHHHHHHHHCCCc
Confidence 456788888864 5788899883 333344444456654
No 280
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=44.18 E-value=39 Score=24.28 Aligned_cols=51 Identities=6% Similarity=0.081 Sum_probs=28.6
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHH----CCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRS----KGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~----~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++++++|+.+ +-....+.++.+++ ...+++++|+. ..........+.|.+
T Consensus 52 ~~dlii~d~~l-----~~~~g~~~~~~l~~~~~~~~~pii~ls~~---~~~~~~~~~~~~g~~ 106 (147)
T 2zay_A 52 HPHLIITEANM-----PKISGMDLFNSLKKNPQTASIPVIALSGR---ATAKEEAQLLDMGFI 106 (147)
T ss_dssp CCSEEEEESCC-----SSSCHHHHHHHHHTSTTTTTSCEEEEESS---CCHHHHHHHHHHTCS
T ss_pred CCCEEEEcCCC-----CCCCHHHHHHHHHcCcccCCCCEEEEeCC---CCHHHHHHHHhCCCC
Confidence 35566555521 11235788888886 46788888883 223333333345554
No 281
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A
Probab=43.95 E-value=22 Score=24.54 Aligned_cols=51 Identities=12% Similarity=0.214 Sum_probs=32.6
Q ss_pred CEEEEeE--E-EEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 26 DAFLFDC--V-IWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 26 k~i~fDi--t-L~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
+.+++|+ + .+++.. +.--.++.+.++++|..+.+ +| ....+.+.|+..|++
T Consensus 45 ~~vvlDls~v~~iDssg-l~~L~~~~~~~~~~g~~l~l-~~----~~~~v~~~l~~~gl~ 98 (110)
T 1sbo_A 45 KKIVLDLSSVSYMDSAG-LGTLVVILKDAKINGKEFIL-SS----LKESISRILKLTHLD 98 (110)
T ss_dssp SEEEEECTTCCCBCHHH-HHHHHHHHHHHHHTTCEEEE-ES----CCHHHHHHHHHTTCG
T ss_pred cEEEEECCCCcEEccHH-HHHHHHHHHHHHHcCCEEEE-Ee----CCHHHHHHHHHhCcc
Confidence 6789999 3 333221 21124667778889988755 55 234677888888886
No 282
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=43.91 E-value=54 Score=22.83 Aligned_cols=50 Identities=16% Similarity=0.183 Sum_probs=26.3
Q ss_pred cCEEEEeEEEEcCCccCccHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 25 VDAFLFDCVIWKGDKLIDGVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 25 ~k~i~fDitL~~~~~~~~~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
++++++|+.+- -....+.++.+++. ..+++++|+. ..........+.|.+
T Consensus 52 ~dlvi~d~~l~-----~~~g~~~~~~l~~~~~~~~ii~~t~~---~~~~~~~~~~~~g~~ 103 (130)
T 3eod_A 52 PDLMICDIAMP-----RMNGLKLLEHIRNRGDQTPVLVISAT---ENMADIAKALRLGVE 103 (130)
T ss_dssp CSEEEECCC----------CHHHHHHHHHTTCCCCEEEEECC---CCHHHHHHHHHHCCS
T ss_pred CCEEEEecCCC-----CCCHHHHHHHHHhcCCCCCEEEEEcC---CCHHHHHHHHHcCCC
Confidence 55555555211 12346778888875 4678888883 333333333345554
No 283
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=43.86 E-value=47 Score=25.44 Aligned_cols=35 Identities=9% Similarity=-0.051 Sum_probs=26.0
Q ss_pred CccH-HHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHH
Q 022007 41 IDGV-RQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKF 76 (304)
Q Consensus 41 ~~~a-~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l 76 (304)
.+.. .+.++.+++.|+++.+.||++ .+.+.+.+.+
T Consensus 17 ~~~~~~~l~~~~~~~g~~~~l~TNG~-l~~~~~~~l~ 52 (182)
T 3can_A 17 HPEFLIDILKRCGQQGIHRAVDTTLL-ARKETVDEVM 52 (182)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECTTC-CCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCcEEEECCCC-CCHHHHHHHH
Confidence 4455 599999999999999999976 5555443333
No 284
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=43.54 E-value=18 Score=28.96 Aligned_cols=27 Identities=26% Similarity=0.308 Sum_probs=20.2
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCC
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTNNS 65 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn~s 65 (304)
.--+...++++.++++|.+++.+||+.
T Consensus 142 G~t~~~i~~~~~ak~~G~~vIaIT~~~ 168 (212)
T 2i2w_A 142 GNSANVIKAIAAAREKGMKVITLTGKD 168 (212)
T ss_dssp SCCHHHHHHHHHHHHHTCEEEEEEETT
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEECCC
Confidence 334667788888888888888888843
No 285
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=43.21 E-value=49 Score=23.94 Aligned_cols=62 Identities=15% Similarity=0.325 Sum_probs=39.6
Q ss_pred hhccCEEEEeEEEEcCCccCc-cHHHHHHHHHH--CCCcEEEEe-CCC--CcCHHHHHHHHHhCCCcc
Q 022007 22 FDSVDAFLFDCVIWKGDKLID-GVRQTLDVLRS--KGKKLIFVT-NNS--RRSRRQYAHKFHSLGVSV 83 (304)
Q Consensus 22 ~~~~k~i~fDitL~~~~~~~~-~a~eal~~L~~--~G~~~~i~T-n~s--~r~~~~~~~~l~~lG~~~ 83 (304)
+.+++.++|=.-.|.+..+.+ ...++++.|.. +|+++.+.. .+. +.....+.+.|+++|+.+
T Consensus 43 l~~~d~iiig~pty~~g~~p~~~~~~fl~~l~~~l~~k~~~~f~t~g~~~~~a~~~l~~~l~~~G~~~ 110 (138)
T 5nul_A 43 LLNEDILILGCSAMTDEVLEESEFEPFIEEISTKISGKKVALFGSYGWGDGKWMRDFEERMNGYGCVV 110 (138)
T ss_dssp HTTCSEEEEEECCBTTTBCCTTTHHHHHHHHGGGCTTCEEEEEEEESSSCSHHHHHHHHHHHHTTCEE
T ss_pred HhhCCEEEEEcCccCCCCCChHHHHHHHHHHHhhcCCCEEEEEEecCCCCChHHHHHHHHHHHCCCEE
Confidence 457888877552244333333 58899999875 677875544 322 234567778888888874
No 286
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=43.16 E-value=1.3e+02 Score=24.35 Aligned_cols=22 Identities=9% Similarity=-0.084 Sum_probs=14.3
Q ss_pred HHHHHHHHcCCC-CCcEEEEcCC
Q 022007 230 MMEILSKKFQIA-SSRMCMVGDR 251 (304)
Q Consensus 230 ~~~~al~~lg~~-~~~~~~IGD~ 251 (304)
....+++..|+. |+++.+||=+
T Consensus 206 g~~~al~~~g~~vP~di~vig~d 228 (292)
T 3k4h_A 206 GVLSALSKKGFVVPKDVSIVSFN 228 (292)
T ss_dssp HHHHHHHHTTCCTTTTCEEEEES
T ss_pred HHHHHHHHhCCCCCCeEEEEEec
Confidence 355667778876 6777666633
No 287
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=42.61 E-value=47 Score=24.36 Aligned_cols=59 Identities=19% Similarity=0.406 Sum_probs=40.2
Q ss_pred ccCEEEEeE-EEEcC--CccCccHHHHHHHHHH---CCCcEEEE-eCCCC-----cCHHHHHHHHHhCCCcc
Q 022007 24 SVDAFLFDC-VIWKG--DKLIDGVRQTLDVLRS---KGKKLIFV-TNNSR-----RSRRQYAHKFHSLGVSV 83 (304)
Q Consensus 24 ~~k~i~fDi-tL~~~--~~~~~~a~eal~~L~~---~G~~~~i~-Tn~s~-----r~~~~~~~~l~~lG~~~ 83 (304)
+++.++|=. | |.. ..+.+.+.++++.|.. .|+++.+. |+++. .....+.+.|+++|+.+
T Consensus 49 ~~d~ii~g~pt-y~~~~G~~p~~~~~fl~~l~~~~l~~k~~~vfg~G~~~y~~~~~a~~~l~~~l~~~G~~~ 119 (148)
T 3f6r_A 49 GYDAVLFGCSA-WGMEDLEMQDDFLSLFEEFDRIGLAGRKVAAFASGDQEYEHFCGAVPAIEERAKELGATI 119 (148)
T ss_dssp TCSEEEEEECE-ECSSSCEECHHHHHHHTTGGGTCCTTCEEEEEEEECTTSSSTTTHHHHHHHHHHHTTCEE
T ss_pred cCCEEEEEecc-cCCCCCCCcHHHHHHHHHhhccCCCCCEEEEEEeCCCCHHHHHHHHHHHHHHHHHcCCEE
Confidence 788888877 6 544 4555568899988764 47776555 43332 23677888888899874
No 288
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=41.90 E-value=65 Score=22.74 Aligned_cols=51 Identities=8% Similarity=0.084 Sum_probs=29.3
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHH-C--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRS-K--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~-~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++.+++|+.+ +--+..+.++.+++ . ..+++++|+. ..........+.|.+
T Consensus 52 ~~dlvllD~~m-----p~~~G~~~~~~lr~~~~~~~~ii~lt~~---~~~~~~~~~~~~ga~ 105 (133)
T 2r25_B 52 NYNMIFMDVQM-----PKVDGLLSTKMIRRDLGYTSPIVALTAF---ADDSNIKECLESGMN 105 (133)
T ss_dssp CCSEEEECSCC-----SSSCHHHHHHHHHHHSCCCSCEEEEESC---CSHHHHHHHHHTTCS
T ss_pred CCCEEEEeCCC-----CCCChHHHHHHHHhhcCCCCCEEEEECC---CCHHHHHHHHHcCCC
Confidence 45666666622 11234688888875 2 4689999983 333333444456654
No 289
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=41.40 E-value=34 Score=24.39 Aligned_cols=37 Identities=22% Similarity=0.290 Sum_probs=24.3
Q ss_pred cHHHHHHHHHH----CCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 43 GVRQTLDVLRS----KGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 43 ~a~eal~~L~~----~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
+..+.++.+++ ...+++++|+ ...........+.|.+
T Consensus 65 ~g~~~~~~l~~~~~~~~~~ii~ls~---~~~~~~~~~~~~~g~~ 105 (140)
T 3lua_A 65 EGLEVLSAIRNNSRTANTPVIIATK---SDNPGYRHAALKFKVS 105 (140)
T ss_dssp HHHHHHHHHHHSGGGTTCCEEEEES---CCCHHHHHHHHHSCCS
T ss_pred cHHHHHHHHHhCcccCCCCEEEEeC---CCCHHHHHHHHHcCCC
Confidence 35788888887 4688999998 3333444444456654
No 290
>3oiz_A Antisigma-factor antagonist, STAS; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, STAS domain; 1.65A {Rhodobacter sphaeroides} PDB: 3lkl_A
Probab=41.03 E-value=11 Score=26.10 Aligned_cols=53 Identities=15% Similarity=0.344 Sum_probs=28.5
Q ss_pred hccCEEEEeE---EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCC
Q 022007 23 DSVDAFLFDC---VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGV 81 (304)
Q Consensus 23 ~~~k~i~fDi---tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~ 81 (304)
...+.+++|+ +.+++.. +.--.+..++++++|..+.++ | ...++.+.|+..|+
T Consensus 42 ~~~~~vvlDls~v~~iDssg-l~~L~~~~~~~~~~g~~l~l~-~----~~~~v~~~l~~~g~ 97 (99)
T 3oiz_A 42 EALDRVVIDVSRAHIWDISS-VQALDMAVLKFRREGAEVRIV-G----MNEASETMVDRLAI 97 (99)
T ss_dssp SCCSEEEEEEEEEEECSHHH-HHHHHHHHHHHHHTTCEEEEE-S----HHHHHTTCC-----
T ss_pred CCCCEEEEECCCCCccCHHH-HHHHHHHHHHHHhCCCEEEEE-c----CCHHHHHHHHHhcC
Confidence 3568899999 3344322 211246777788999888554 4 23444444554443
No 291
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=40.49 E-value=48 Score=25.93 Aligned_cols=52 Identities=15% Similarity=0.209 Sum_probs=30.7
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHH------CCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRS------KGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~------~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.+++|++|+.+ +-.+..+.++.|++ ...+++++|+.. ... .......+.|.+
T Consensus 119 ~~dlillD~~l-----p~~~G~el~~~lr~~~~~~~~~~piI~ls~~~-~~~-~~~~~~~~~Ga~ 176 (206)
T 3mm4_A 119 PFDYIFMDCQM-----PEMDGYEATREIRKVEKSYGVRTPIIAVSGHD-PGS-EEARETIQAGMD 176 (206)
T ss_dssp SCSEEEEESCC-----SSSCHHHHHHHHHHHHHTTTCCCCEEEEESSC-CCH-HHHHHHHHHTCS
T ss_pred CCCEEEEcCCC-----CCCCHHHHHHHHHhhhhhcCCCCcEEEEECCC-CcH-HHHHHHHhCCCC
Confidence 46777777632 12245778888876 468899999832 122 333344455654
No 292
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=40.45 E-value=56 Score=23.22 Aligned_cols=50 Identities=8% Similarity=0.035 Sum_probs=28.1
Q ss_pred cCEEEEeEEEEcCCccCccHHHHHHHHHH------CCCcEEEEeCCCCcCHHHHHHHHHhCC-Cc
Q 022007 25 VDAFLFDCVIWKGDKLIDGVRQTLDVLRS------KGKKLIFVTNNSRRSRRQYAHKFHSLG-VS 82 (304)
Q Consensus 25 ~k~i~fDitL~~~~~~~~~a~eal~~L~~------~G~~~~i~Tn~s~r~~~~~~~~l~~lG-~~ 82 (304)
++++++|+.+ +-....+.++.+++ ...+++++|. .............| .+
T Consensus 61 ~dlvi~D~~l-----~~~~g~~~~~~l~~~~~~~~~~~~ii~~t~---~~~~~~~~~~~~~g~~~ 117 (146)
T 3ilh_A 61 PSIICIDINM-----PGINGWELIDLFKQHFQPMKNKSIVCLLSS---SLDPRDQAKAEASDWVD 117 (146)
T ss_dssp CSEEEEESSC-----SSSCHHHHHHHHHHHCGGGTTTCEEEEECS---SCCHHHHHHHHHCSSCC
T ss_pred CCEEEEcCCC-----CCCCHHHHHHHHHHhhhhccCCCeEEEEeC---CCChHHHHHHHhcCCcc
Confidence 6666666522 11235778888887 4577888887 33333333444444 54
No 293
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=40.37 E-value=18 Score=26.11 Aligned_cols=70 Identities=11% Similarity=0.124 Sum_probs=40.6
Q ss_pred cchhhHHHhhhcc--CEEEEeE-EE--EcCCccCccHH----HHH-HHHHH--CCCcEEEEeCCCCcC-HHHHHHHHHhC
Q 022007 13 LSANNITALFDSV--DAFLFDC-VI--WKGDKLIDGVR----QTL-DVLRS--KGKKLIFVTNNSRRS-RRQYAHKFHSL 79 (304)
Q Consensus 13 ~~~~~~~~~~~~~--k~i~fDi-tL--~~~~~~~~~a~----eal-~~L~~--~G~~~~i~Tn~s~r~-~~~~~~~l~~l 79 (304)
.+.+++.+++.+- +.+++|+ .- +.....+|||. ..+ ..+.+ ++.++++..+...|+ .......|+++
T Consensus 17 is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~nip~~~l~~~~~~l~~~~~ivvyC~~g~r~~s~~a~~~L~~~ 96 (124)
T 3flh_A 17 IDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAIAMPAKDLATRIGELDPAKTYVVYDWTGGTTLGKTALLVLLSA 96 (124)
T ss_dssp ECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTCEECCHHHHHHHGGGSCTTSEEEEECSSSSCSHHHHHHHHHHHH
T ss_pred ecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCCEECCHHHHHHHHhcCCCCCeEEEEeCCCCchHHHHHHHHHHHc
Confidence 4556777777764 3899999 42 21223445542 222 22222 356677776655555 46666778888
Q ss_pred CCc
Q 022007 80 GVS 82 (304)
Q Consensus 80 G~~ 82 (304)
|++
T Consensus 97 G~~ 99 (124)
T 3flh_A 97 GFE 99 (124)
T ss_dssp TCE
T ss_pred CCe
Confidence 875
No 294
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=40.18 E-value=5.8 Score=32.11 Aligned_cols=30 Identities=17% Similarity=0.301 Sum_probs=20.2
Q ss_pred cCEEEEeE--EEEcCCccCccH-HHHHHHHHHCCCc
Q 022007 25 VDAFLFDC--VIWKGDKLIDGV-RQTLDVLRSKGKK 57 (304)
Q Consensus 25 ~k~i~fDi--tL~~~~~~~~~a-~eal~~L~~~G~~ 57 (304)
+|+|+||+ ||++....+..+ .+++ ++.|++
T Consensus 4 ~k~viFDlDGTL~ds~~~~~~~~~~~~---~~~g~~ 36 (240)
T 2hi0_A 4 YKAAIFDMDGTILDTSADLTSALNYAF---EQTGHR 36 (240)
T ss_dssp CSEEEECSBTTTEECHHHHHHHHHHHH---HHTTSC
T ss_pred ccEEEEecCCCCccCHHHHHHHHHHHH---HHcCCC
Confidence 79999999 999987654332 3444 345654
No 295
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=39.46 E-value=21 Score=28.12 Aligned_cols=33 Identities=21% Similarity=0.203 Sum_probs=24.6
Q ss_pred cCCccCccHHHHHHHHHHCCCcEEEEeCCCCcC
Q 022007 36 KGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRS 68 (304)
Q Consensus 36 ~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~ 68 (304)
....--+...++++.++++|.+++.+|++..-+
T Consensus 100 S~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~ 132 (201)
T 3fxa_A 100 SKGGNTGELLNLIPACKTKGSTLIGVTENPDSV 132 (201)
T ss_dssp CSSSCCHHHHTTHHHHHHHTCEEEEEESCTTSH
T ss_pred eCCCCCHHHHHHHHHHHHcCCeEEEEECCCCCh
Confidence 333445567889999999999999999854433
No 296
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=39.44 E-value=56 Score=23.22 Aligned_cols=51 Identities=16% Similarity=0.054 Sum_probs=29.9
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++++++|+.+- -....+.++.+++. ..+++++|+. ..........+.|.+
T Consensus 49 ~~dlvi~d~~l~-----~~~g~~~~~~l~~~~~~~~ii~ls~~---~~~~~~~~~~~~g~~ 101 (143)
T 3jte_A 49 SIDVVITDMKMP-----KLSGMDILREIKKITPHMAVIILTGH---GDLDNAILAMKEGAF 101 (143)
T ss_dssp TCCEEEEESCCS-----SSCHHHHHHHHHHHCTTCEEEEEECT---TCHHHHHHHHHTTCS
T ss_pred CCCEEEEeCCCC-----CCcHHHHHHHHHHhCCCCeEEEEECC---CCHHHHHHHHHhCcc
Confidence 567777776221 12356778888764 5778888873 333333444455654
No 297
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=39.43 E-value=1.8e+02 Score=24.75 Aligned_cols=37 Identities=8% Similarity=0.021 Sum_probs=22.3
Q ss_pred HHHHHHHHcCCC-CCcEEEEcCCchhhHHHHHHcCCeEEEE
Q 022007 230 MMEILSKKFQIA-SSRMCMVGDRLDTDILFGQNAGCKTLLV 269 (304)
Q Consensus 230 ~~~~al~~lg~~-~~~~~~IGD~~~~Di~~a~~aG~~ti~V 269 (304)
....+++..|+. |+++-+||=+ |+..+...++.|+-.
T Consensus 282 g~~~al~~~G~~vP~disvigfD---~~~~~~~~~lttv~q 319 (366)
T 3h5t_A 282 GVLEYLKSVGKSAPADLSLTGFD---GTHMALARDLTTVIQ 319 (366)
T ss_dssp HHHHHHHHTTCCTTTTCEEEEEE---CCHHHHHTTCCEEEC
T ss_pred HHHHHHHHcCCCCCCceEEEEEC---CChhhcCCCccEEEe
Confidence 355667788886 7887666622 222333567777654
No 298
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=39.20 E-value=60 Score=23.04 Aligned_cols=36 Identities=14% Similarity=0.113 Sum_probs=22.2
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHC----CCcEEEEeCC
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK----GKKLIFVTNN 64 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~----G~~~~i~Tn~ 64 (304)
.++++++|+.+ +--+..+.++.+++. ..+++++|+.
T Consensus 48 ~~dlvl~D~~l-----p~~~g~~~~~~lr~~~~~~~~pii~~t~~ 87 (136)
T 3t6k_A 48 LPDALICDVLL-----PGIDGYTLCKRVRQHPLTKTLPILMLTAQ 87 (136)
T ss_dssp CCSEEEEESCC-----SSSCHHHHHHHHHHSGGGTTCCEEEEECT
T ss_pred CCCEEEEeCCC-----CCCCHHHHHHHHHcCCCcCCccEEEEecC
Confidence 35555555522 222357888888764 5778888883
No 299
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=39.17 E-value=30 Score=27.39 Aligned_cols=31 Identities=13% Similarity=0.086 Sum_probs=22.1
Q ss_pred EcCCccCccHHHHHHHHHHCCCcEEEEeCCC
Q 022007 35 WKGDKLIDGVRQTLDVLRSKGKKLIFVTNNS 65 (304)
Q Consensus 35 ~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s 65 (304)
.....--+...++++.++++|.+++.+|++.
T Consensus 121 iS~SG~t~~~~~~~~~ak~~g~~vi~iT~~~ 151 (201)
T 3trj_A 121 ITTSGDSENILSAVEEAHDLEMKVIALTGGS 151 (201)
T ss_dssp ECSSSCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred EeCCCCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 3334455567888888888888888888743
No 300
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=39.14 E-value=6.1 Score=32.11 Aligned_cols=22 Identities=9% Similarity=-0.013 Sum_probs=17.0
Q ss_pred HhhhccCEEEEeE--EEEcCCccC
Q 022007 20 ALFDSVDAFLFDC--VIWKGDKLI 41 (304)
Q Consensus 20 ~~~~~~k~i~fDi--tL~~~~~~~ 41 (304)
..+..+|+|+||+ ||++....+
T Consensus 18 ~~~~~~k~iiFDlDGTL~d~~~~~ 41 (243)
T 2hsz_A 18 QGMTQFKLIGFDLDGTLVNSLPDL 41 (243)
T ss_dssp -CCSSCSEEEECSBTTTEECHHHH
T ss_pred cCCccCCEEEEcCCCcCCCCHHHH
Confidence 3456789999999 999876544
No 301
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=39.12 E-value=38 Score=27.17 Aligned_cols=29 Identities=17% Similarity=0.245 Sum_probs=23.3
Q ss_pred ccCccHHHHHHHHHH--CCCcEEEEeCCCCc
Q 022007 39 KLIDGVRQTLDVLRS--KGKKLIFVTNNSRR 67 (304)
Q Consensus 39 ~~~~~a~eal~~L~~--~G~~~~i~Tn~s~r 67 (304)
.-.+...++++.+++ +|.+++.+|++..-
T Consensus 117 G~t~~~i~~~~~ak~~~~Ga~vI~IT~~~~s 147 (220)
T 3etn_A 117 GKTREIVELTQLAHNLNPGLKFIVITGNPDS 147 (220)
T ss_dssp SCCHHHHHHHHHHHHHCTTCEEEEEESCTTS
T ss_pred CCCHHHHHHHHHHHhcCCCCeEEEEECCCCC
Confidence 345667899999999 99999999985433
No 302
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=38.95 E-value=1.6e+02 Score=24.05 Aligned_cols=34 Identities=6% Similarity=-0.082 Sum_probs=19.6
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCC
Q 022007 230 MMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGC 264 (304)
Q Consensus 230 ~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG~ 264 (304)
....+++..|+..+++.++|=+ ..+....-..|.
T Consensus 211 g~~~al~~~g~~v~di~vvG~D-~~~~~~~~~~~~ 244 (306)
T 8abp_A 211 GGVRATEGQGFKAADIIGIGIN-GVDAVSELSKAQ 244 (306)
T ss_dssp HHHHHHHHTTCCGGGEEEEEES-SGGGHHHHTSSS
T ss_pred HHHHHHHHcCCCCCceEEEEeC-cHHHHHHHHcCC
Confidence 3556677788866777777633 223434444554
No 303
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=38.90 E-value=58 Score=23.82 Aligned_cols=37 Identities=11% Similarity=0.128 Sum_probs=21.8
Q ss_pred cHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 43 GVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 43 ~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
...+.++.|++. ..+++++|+ ...........+.|.+
T Consensus 97 ~g~~~~~~lr~~~~~~~ii~ls~---~~~~~~~~~~~~~g~~ 135 (157)
T 3hzh_A 97 DGITCLSNIMEFDKNARVIMISA---LGKEQLVKDCLIKGAK 135 (157)
T ss_dssp CHHHHHHHHHHHCTTCCEEEEES---CCCHHHHHHHHHTTCS
T ss_pred cHHHHHHHHHhhCCCCcEEEEec---cCcHHHHHHHHHcCCC
Confidence 356777777764 467888887 3333334444455654
No 304
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=38.76 E-value=15 Score=30.14 Aligned_cols=29 Identities=17% Similarity=0.219 Sum_probs=23.7
Q ss_pred cCCccCccHHHHHHHHHHCCCcEEEEeCCCC
Q 022007 36 KGDKLIDGVRQTLDVLRSKGKKLIFVTNNSR 66 (304)
Q Consensus 36 ~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~ 66 (304)
+....+|++.++++.|+ +|+++ ++||...
T Consensus 127 ~~~~~~~~~~~~l~~L~-~g~~~-i~tn~~~ 155 (263)
T 1zjj_A 127 DPDLTYEKLKYATLAIR-NGATF-IGTNPDA 155 (263)
T ss_dssp CTTCBHHHHHHHHHHHH-TTCEE-EESCCCS
T ss_pred CCCCCHHHHHHHHHHHH-CCCEE-EEECCCc
Confidence 34457889999999999 89998 9999543
No 305
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=38.75 E-value=44 Score=23.86 Aligned_cols=51 Identities=16% Similarity=0.159 Sum_probs=29.0
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHC----CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK----GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~----G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++++++|+ .-+-....+.++.+++. ..+++++|+.. .........+.|.+
T Consensus 62 ~~dlvi~D~-----~l~~~~g~~~~~~l~~~~~~~~~~ii~~t~~~---~~~~~~~~~~~g~~ 116 (149)
T 1k66_A 62 RPAVILLDL-----NLPGTDGREVLQEIKQDEVLKKIPVVIMTTSS---NPKDIEICYSYSIS 116 (149)
T ss_dssp CCSEEEECS-----CCSSSCHHHHHHHHTTSTTGGGSCEEEEESCC---CHHHHHHHHHTTCS
T ss_pred CCcEEEEEC-----CCCCCCHHHHHHHHHhCcccCCCeEEEEeCCC---CHHHHHHHHHCCCC
Confidence 355555555 21222457888888874 57888999832 23333344455654
No 306
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=38.71 E-value=1.1e+02 Score=24.84 Aligned_cols=89 Identities=10% Similarity=0.023 Sum_probs=53.7
Q ss_pred CHHHHHHHHHHHHcCCCceEEEecCCCccCCCCCccccChHHHHHHHHHhhCCCCcccCCCcHHHHHHHHHHcCCCCCcE
Q 022007 166 NYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRM 245 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~gKP~~~~~~~al~~lg~~~~~~ 245 (304)
+..++..++...++..+...+++.+.. . . -...+...++.+...+.--+++-.+.+++.+.-+ .--
T Consensus 91 s~~Dil~aL~~a~~~~~kIavVg~~~~-~--------~----~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~-G~~ 156 (225)
T 2pju_A 91 SGYDVLQFLAKAGKLTSSIGVVTYQET-I--------P----ALVAFQKTFNLRLDQRSYITEEDARGQINELKAN-GTE 156 (225)
T ss_dssp CHHHHHHHHHHTTCTTSCEEEEEESSC-C--------H----HHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHT-TCC
T ss_pred CHHHHHHHHHHHHhhCCcEEEEeCchh-h--------h----HHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHC-CCC
Confidence 466666776666654333455555443 1 1 1355677777776443333454455555554211 223
Q ss_pred EEEcCCchhhHHHHHHcCCeEEEEc
Q 022007 246 CMVGDRLDTDILFGQNAGCKTLLVL 270 (304)
Q Consensus 246 ~~IGD~~~~Di~~a~~aG~~ti~V~ 270 (304)
+.|||.+ . ...|++.|++++++.
T Consensus 157 vVVG~~~-~-~~~A~~~Gl~~vlI~ 179 (225)
T 2pju_A 157 AVVGAGL-I-TDLAEEAGMTGIFIY 179 (225)
T ss_dssp EEEESHH-H-HHHHHHTTSEEEESS
T ss_pred EEECCHH-H-HHHHHHcCCcEEEEC
Confidence 5999993 3 788999999999987
No 307
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=38.25 E-value=74 Score=22.31 Aligned_cols=51 Identities=24% Similarity=0.183 Sum_probs=28.5
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++.+++|+.+ +-.+..+.++.+++. ..+++++|+.. ........-+.|.+
T Consensus 49 ~~dlvilD~~l-----p~~~g~~~~~~l~~~~~~~~ii~ls~~~---~~~~~~~~~~~ga~ 101 (133)
T 3b2n_A 49 NPNVVILDIEM-----PGMTGLEVLAEIRKKHLNIKVIIVTTFK---RPGYFEKAVVNDVD 101 (133)
T ss_dssp CCSEEEECSSC-----SSSCHHHHHHHHHHTTCSCEEEEEESCC---CHHHHHHHHHTTCS
T ss_pred CCCEEEEecCC-----CCCCHHHHHHHHHHHCCCCcEEEEecCC---CHHHHHHHHHcCCc
Confidence 35566555521 112356888888864 57888999832 22333333345654
No 308
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=38.24 E-value=1.6e+02 Score=23.94 Aligned_cols=19 Identities=16% Similarity=0.121 Sum_probs=12.5
Q ss_pred HHHHHHHcCCC-CCcEEEEc
Q 022007 231 MEILSKKFQIA-SSRMCMVG 249 (304)
Q Consensus 231 ~~~al~~lg~~-~~~~~~IG 249 (304)
...+++..|+. |+++-+||
T Consensus 200 ~~~al~~~g~~vP~di~vig 219 (289)
T 3k9c_A 200 VLDLLVRSGRDVPADISVVG 219 (289)
T ss_dssp HHHHHHHTTCCTTTTCEEEE
T ss_pred HHHHHHHcCCCCCCceEEEE
Confidence 55667777876 67765555
No 309
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=37.85 E-value=62 Score=22.79 Aligned_cols=36 Identities=14% Similarity=0.104 Sum_probs=21.3
Q ss_pred HHHHHHHHHH-CCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 44 VRQTLDVLRS-KGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 44 a~eal~~L~~-~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
..+.++.+++ ...+++++|+. ..........+.|.+
T Consensus 70 g~~~~~~l~~~~~~~ii~ls~~---~~~~~~~~~~~~g~~ 106 (140)
T 3cg0_A 70 GVETAARLAAGCNLPIIFITSS---QDVETFQRAKRVNPF 106 (140)
T ss_dssp HHHHHHHHHHHSCCCEEEEECC---CCHHHHHHHHTTCCS
T ss_pred HHHHHHHHHhCCCCCEEEEecC---CCHHHHHHHHhcCCC
Confidence 4566666665 47888888883 223333444456654
No 310
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A*
Probab=37.77 E-value=27 Score=25.21 Aligned_cols=54 Identities=9% Similarity=0.080 Sum_probs=34.2
Q ss_pred ccCEEEEeE--EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDC--VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDi--tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
..+.+++|+ |-+-+..-+.--..+.+.++++|.++.++ | ....+.+.|+..|++
T Consensus 51 ~~~~vvlDls~V~~iDSsGl~~L~~~~~~~~~~g~~l~l~-~----~~~~v~~~l~~~gl~ 106 (125)
T 2ka5_A 51 GYNKIFLVLSDVESIDSFSLGVIVNILKSISSSGGFFALV-S----PNEKVERVLSLTNLD 106 (125)
T ss_dssp TCCEEEEECTTCSCCCHHHHHHHHHHHHHHHHHTCEEEEE-C----CCHHHHHHHHHTTST
T ss_pred CCCEEEEECCCCCEEcHHHHHHHHHHHHHHHHcCCEEEEE-e----CCHHHHHHHHHcCCC
Confidence 467889999 33322221211246777788889888655 4 245677888888886
No 311
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=37.72 E-value=1.7e+02 Score=23.94 Aligned_cols=65 Identities=5% Similarity=0.038 Sum_probs=31.8
Q ss_pred HHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc-cCC---------CCee----chHHHHHHHHHhCCCCCCCe
Q 022007 44 VRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS-VSE---------DEIF----SSSFAAAMYLKVNNFPQENK 109 (304)
Q Consensus 44 a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~-~~~---------~~i~----~~~~~~~~~l~~~~~~~~~~ 109 (304)
..+.++.+.++++--+|+....... ...+.+.+.|++ +.. ..|. ..+..+.++|.+.|.. +
T Consensus 54 ~~~~~~~l~~~~vdGiIi~~~~~~~--~~~~~l~~~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~---~ 128 (294)
T 3qk7_A 54 YQSLIHLVETRRVDALIVAHTQPED--FRLQYLQKQNFPFLALGRSHLPKPYAWFDFDNHAGASLAVKRLLELGHQ---R 128 (294)
T ss_dssp CHHHHHHHHHTCCSEEEECSCCSSC--HHHHHHHHTTCCEEEESCCCCSSCCEEEEECHHHHHHHHHHHHHHTTCC---C
T ss_pred HHHHHHHHHcCCCCEEEEeCCCCCh--HHHHHHHhCCCCEEEECCCCCCCCCCEEEcChHHHHHHHHHHHHHCCCc---e
Confidence 3455566666666555554422111 344555555655 110 1111 2355566788777653 4
Q ss_pred EEEE
Q 022007 110 VYVI 113 (304)
Q Consensus 110 v~~~ 113 (304)
+.++
T Consensus 129 I~~i 132 (294)
T 3qk7_A 129 IAFV 132 (294)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5544
No 312
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=37.62 E-value=76 Score=22.85 Aligned_cols=35 Identities=14% Similarity=0.236 Sum_probs=22.1
Q ss_pred cCEEEEeEEEEcCCccCccHHHHHHHHHHC----CCcEEEEeCC
Q 022007 25 VDAFLFDCVIWKGDKLIDGVRQTLDVLRSK----GKKLIFVTNN 64 (304)
Q Consensus 25 ~k~i~fDitL~~~~~~~~~a~eal~~L~~~----G~~~~i~Tn~ 64 (304)
++.+++|+.+ +--+..+.++.|++. ..+++++|+.
T Consensus 62 ~dlillD~~l-----p~~~g~~l~~~l~~~~~~~~~piiils~~ 100 (149)
T 1i3c_A 62 PNLILLDLNL-----PKKDGREVLAEIKQNPDLKRIPVVVLTTS 100 (149)
T ss_dssp CSEEEECSCC-----SSSCHHHHHHHHHHCTTTTTSCEEEEESC
T ss_pred CCEEEEeCCC-----CCCcHHHHHHHHHhCcCcCCCeEEEEECC
Confidence 5566555522 112356888888874 5688899873
No 313
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=36.94 E-value=75 Score=22.89 Aligned_cols=51 Identities=14% Similarity=0.099 Sum_probs=28.9
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++++++|+ .-+-....+.++.+++. ..+++++|+ ...........+.|.+
T Consensus 61 ~~dlii~d~-----~l~~~~g~~~~~~l~~~~~~~~ii~~s~---~~~~~~~~~~~~~g~~ 113 (152)
T 3eul_A 61 LPDVALLDY-----RMPGMDGAQVAAAVRSYELPTRVLLISA---HDEPAIVYQALQQGAA 113 (152)
T ss_dssp CCSEEEEET-----TCSSSCHHHHHHHHHHTTCSCEEEEEES---CCCHHHHHHHHHTTCS
T ss_pred CCCEEEEeC-----CCCCCCHHHHHHHHHhcCCCCeEEEEEc---cCCHHHHHHHHHcCCC
Confidence 355555554 22223467888888875 466888887 3333344444456654
No 314
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=36.70 E-value=1.7e+02 Score=23.84 Aligned_cols=37 Identities=8% Similarity=0.006 Sum_probs=22.3
Q ss_pred HHHHHHHHcCCC-CCcEEEEcCCchhhHHHHHHc--CCeEEEE
Q 022007 230 MMEILSKKFQIA-SSRMCMVGDRLDTDILFGQNA--GCKTLLV 269 (304)
Q Consensus 230 ~~~~al~~lg~~-~~~~~~IGD~~~~Di~~a~~a--G~~ti~V 269 (304)
....+++..|+. |+++-+||=+ |...+... ++.|+..
T Consensus 206 g~~~al~~~g~~vP~di~vig~D---~~~~~~~~~p~lttv~~ 245 (295)
T 3hcw_A 206 AILSVLYELNIEIPKDVMTATFN---DSYLTEIASPPQTCIDI 245 (295)
T ss_dssp HHHHHHHHTTCCTTTTEEEEEEC---CSHHHHTSSSCCEEEEC
T ss_pred HHHHHHHHcCCCCCCceEEEEeC---ChhHHhhCCCCeeEEEE
Confidence 355677788886 7888887744 22344443 4555543
No 315
>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A
Probab=36.10 E-value=22 Score=32.58 Aligned_cols=30 Identities=30% Similarity=0.399 Sum_probs=23.5
Q ss_pred ccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHH
Q 022007 42 DGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHK 75 (304)
Q Consensus 42 ~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~ 75 (304)
|.....|++|++.|+.++++|| |.-.+.+.
T Consensus 189 ~~l~~~L~~lr~~GKklFLiTN----S~~~y~~~ 218 (470)
T 4g63_A 189 KEVVEGLKHFIRYGKKIFILTN----SEYSYSKL 218 (470)
T ss_dssp HHHHHHHHHHHTTTCEEEEECS----SCHHHHHH
T ss_pred HhHHHHHHHHHHcCCeEEEeeC----CCchHHHH
Confidence 4567899999999999999999 34444444
No 316
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=35.94 E-value=44 Score=28.94 Aligned_cols=51 Identities=12% Similarity=0.075 Sum_probs=39.0
Q ss_pred ccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHH------HHHcCCeEEEEccCC
Q 022007 222 VVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILF------GQNAGCKTLLVLSGV 273 (304)
Q Consensus 222 ~~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~------a~~aG~~ti~V~~G~ 273 (304)
...-|+++.|..++..+||..++.|+|=|+ ....-+ .+..|.+-+.|+.|.
T Consensus 92 ph~LP~~~~f~~~l~~lGI~~d~~VVvYD~-~~~~~AaR~wW~Lr~~Gh~~V~vLdGg 148 (327)
T 3utn_X 92 PHMFPTKKVFDDAMSNLGVQKDDILVVYDR-VGNFSSPRCAWTLGVMGHPKVYLLNNF 148 (327)
T ss_dssp TTCCCCHHHHHHHHHHTTCCTTCEEEEECS-SSSSSHHHHHHHHHHTTCSEEEEESCH
T ss_pred CCCCcCHHHHHHHHHHcCCCCCCEEEEEeC-CCCcHHHHHHHHHHHcCCCceeecccH
Confidence 345688999999999999999987777665 333433 456899999998763
No 317
>2nn4_A Hypothetical protein YQGQ; novel fold, PFAM:DUF910, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: a.272.1.1
Probab=35.82 E-value=10 Score=24.93 Aligned_cols=25 Identities=32% Similarity=0.481 Sum_probs=20.4
Q ss_pred HHHHHHHcCCCCCcEEEEcCCchhhHHHHH
Q 022007 231 MEILSKKFQIASSRMCMVGDRLDTDILFGQ 260 (304)
Q Consensus 231 ~~~al~~lg~~~~~~~~IGD~~~~Di~~a~ 260 (304)
.+.+++++|+ ++++||. .+||++..
T Consensus 8 VqQLLK~fG~----~IY~GdR-~~DielM~ 32 (72)
T 2nn4_A 8 VQQLLKTFGH----IVYFGDR-ELEIEFML 32 (72)
T ss_dssp HHHHHHTTTC----CCCCSCH-HHHHHHHH
T ss_pred HHHHHHHCCE----EEEeCCh-HHHHHHHH
Confidence 4667888885 7899999 89999865
No 318
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=35.80 E-value=57 Score=22.80 Aligned_cols=51 Identities=22% Similarity=0.283 Sum_probs=27.7
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++.+++|+ .-+-....+.++.+++. ..+++++|+. ..........+.|.+
T Consensus 46 ~~dlii~d~-----~l~~~~g~~~~~~l~~~~~~~~ii~~s~~---~~~~~~~~~~~~g~~ 98 (134)
T 3f6c_A 46 KPDIVIIDV-----DIPGVNGIQVLETLRKRQYSGIIIIVSAK---NDHFYGKHCADAGAN 98 (134)
T ss_dssp CCSEEEEET-----TCSSSCHHHHHHHHHHTTCCSEEEEEECC------CTHHHHHHTTCS
T ss_pred CCCEEEEec-----CCCCCChHHHHHHHHhcCCCCeEEEEeCC---CChHHHHHHHHhCCC
Confidence 455555554 22223467888888875 4678888873 333333344455654
No 319
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=35.70 E-value=80 Score=21.75 Aligned_cols=37 Identities=16% Similarity=0.244 Sum_probs=21.7
Q ss_pred cHHHHHHHHHH----CCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 43 GVRQTLDVLRS----KGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 43 ~a~eal~~L~~----~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
+..+.++.+++ ...+++++|+. ..........+.|.+
T Consensus 63 ~g~~l~~~l~~~~~~~~~~ii~~s~~---~~~~~~~~~~~~ga~ 103 (128)
T 1jbe_A 63 DGLELLKTIRAXXAMSALPVLMVTAE---AKKENIIAAAQAGAS 103 (128)
T ss_dssp CHHHHHHHHHC--CCTTCCEEEEESS---CCHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHhhcccCCCcEEEEecC---ccHHHHHHHHHhCcC
Confidence 35678888886 24678888873 223333333445553
No 320
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=34.95 E-value=38 Score=24.09 Aligned_cols=63 Identities=29% Similarity=0.476 Sum_probs=40.0
Q ss_pred hHHHhhhccCEEEEeE-EEEcC-CccCccHHHHHHHHHHCCCcEEEEeCCCCcCHH-HHHHHHHhCCCcc
Q 022007 17 NITALFDSVDAFLFDC-VIWKG-DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRR-QYAHKFHSLGVSV 83 (304)
Q Consensus 17 ~~~~~~~~~k~i~fDi-tL~~~-~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~-~~~~~l~~lG~~~ 83 (304)
++..+-.+|.- +|+ ++... +.-+ .+++|...+++|..++++-||-.-.+. +..+.++.-|.++
T Consensus 67 nireiwerypq--ldvvvivttddkew--ikdfieeakergvevfvvynnkdddrrkeaqqefrsdgvdv 132 (162)
T 2l82_A 67 NIREIWERYPQ--LDVVVIVTTDDKEW--IKDFIEEAKERGVEVFVVYNNKDDDRRKEAQQEFRSDGVDV 132 (162)
T ss_dssp HHHHHHHHCTT--CCEEEEEECCCHHH--HHHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHCCSSCEE
T ss_pred HHHHHHHhCCC--CcEEEEEecCcHHH--HHHHHHHHHhcCcEEEEEecCCCchhHHHHHHHhhhcCcee
Confidence 33444444443 566 55532 2222 378999999999999999998655543 4445577777774
No 321
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=34.80 E-value=90 Score=22.30 Aligned_cols=36 Identities=11% Similarity=0.148 Sum_probs=19.1
Q ss_pred HHHHHHHHHH------CCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 44 VRQTLDVLRS------KGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 44 a~eal~~L~~------~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
..+.++.+++ ...+++++|.. ..........+.|.+
T Consensus 73 g~~~~~~lr~~~~~~~~~~pii~~s~~---~~~~~~~~~~~~Ga~ 114 (143)
T 3m6m_D 73 GLDMLKQLRVMQASGMRYTPVVVLSAD---VTPEAIRACEQAGAR 114 (143)
T ss_dssp HHHHHHHHHHHHHTTCCCCCEEEEESC---CCHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhchhccCCCCeEEEEeCC---CCHHHHHHHHHcChh
Confidence 4566666653 23567777772 223334444455654
No 322
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=34.61 E-value=22 Score=24.10 Aligned_cols=67 Identities=12% Similarity=0.173 Sum_probs=34.9
Q ss_pred cchhhHHHhhhccCEEEEeE-EEEc-CCccCccHH----HHHH-HHH--HCCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 13 LSANNITALFDSVDAFLFDC-VIWK-GDKLIDGVR----QTLD-VLR--SKGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 13 ~~~~~~~~~~~~~k~i~fDi-tL~~-~~~~~~~a~----eal~-~L~--~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.+.+++.+++.+ +.+++|+ .-.. ....+|||. .-+. .+. .+ .++++..+ ++.........|+++|++
T Consensus 4 is~~~l~~~~~~-~~~liDvR~~~e~~~ghi~gAi~ip~~~l~~~~~~l~~-~~ivvyC~-~g~rs~~a~~~L~~~G~~ 79 (94)
T 1wv9_A 4 VRPEELPALLEE-GVLVVDVRPADRRSTPLPFAAEWVPLEKIQKGEHGLPR-RPLLLVCE-KGLLSQVAALYLEAEGYE 79 (94)
T ss_dssp ECGGGHHHHHHT-TCEEEECCCC--CCSCCSSCCEECCHHHHTTTCCCCCS-SCEEEECS-SSHHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHC-CCEEEECCCHHHHhcccCCCCEECCHHHHHHHHHhCCC-CCEEEEcC-CCChHHHHHHHHHHcCCc
Confidence 355667777766 7889999 4322 123455553 1111 111 13 55655555 333334555667777775
No 323
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=34.51 E-value=2.1e+02 Score=24.05 Aligned_cols=20 Identities=10% Similarity=0.026 Sum_probs=14.4
Q ss_pred HHHHHHHcCCC-CCcEEEEcC
Q 022007 231 MEILSKKFQIA-SSRMCMVGD 250 (304)
Q Consensus 231 ~~~al~~lg~~-~~~~~~IGD 250 (304)
...+++..|+. |+++-+||=
T Consensus 262 ~~~al~~~g~~vP~disvvg~ 282 (344)
T 3kjx_A 262 GLLYLLEQGIDIPGQIGLAGF 282 (344)
T ss_dssp HHHHHHHTTCCTTTTCEEECS
T ss_pred HHHHHHHcCCCCCCceEEEEE
Confidence 45567778876 688888873
No 324
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=34.45 E-value=58 Score=22.94 Aligned_cols=37 Identities=27% Similarity=0.327 Sum_probs=21.4
Q ss_pred cHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 43 GVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 43 ~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
...+.++.+++. ..+++++|+. ..........+.|.+
T Consensus 65 ~g~~~~~~l~~~~~~~~ii~~s~~---~~~~~~~~~~~~g~~ 103 (137)
T 3hdg_A 65 GGLEMLDRIKAGGAKPYVIVISAF---SEMKYFIKAIELGVH 103 (137)
T ss_dssp CHHHHHHHHHHTTCCCEEEECCCC---CCHHHHHHHHHHCCS
T ss_pred CHHHHHHHHHhcCCCCcEEEEecC---cChHHHHHHHhCCcc
Confidence 456788888875 4567777763 323333344455654
No 325
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=34.30 E-value=1.9e+02 Score=23.52 Aligned_cols=63 Identities=17% Similarity=0.121 Sum_probs=31.0
Q ss_pred HHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc-cC----CC-----Ce----echHHHHHHHHHhCCCCCCCeEEE
Q 022007 47 TLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS-VS----ED-----EI----FSSSFAAAMYLKVNNFPQENKVYV 112 (304)
Q Consensus 47 al~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~-~~----~~-----~i----~~~~~~~~~~l~~~~~~~~~~v~~ 112 (304)
.++.+.+++.--+|+.... .+ ....+.+.+.|++ +. .. .| ...+..+.+||.+.|. +++.+
T Consensus 59 ~~~~l~~~~vdgiIi~~~~-~~-~~~~~~l~~~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~---~~I~~ 133 (290)
T 2rgy_A 59 AVRFLIGRDCDGVVVISHD-LH-DEDLDELHRMHPKMVFLNRAFDALPDASFCPDHRRGGELAAATLIEHGH---RKLAV 133 (290)
T ss_dssp HHHHHHHTTCSEEEECCSS-SC-HHHHHHHHHHCSSEEEESSCCTTSGGGEECCCHHHHHHHHHHHHHHTTC---CSEEE
T ss_pred HHHHHHhcCccEEEEecCC-CC-HHHHHHHhhcCCCEEEEccccCCCCCCEEEeCcHHHHHHHHHHHHHCCC---ceEEE
Confidence 6666666666655555422 22 2334445555555 11 00 11 1234556678877664 34555
Q ss_pred Ec
Q 022007 113 IG 114 (304)
Q Consensus 113 ~g 114 (304)
++
T Consensus 134 i~ 135 (290)
T 2rgy_A 134 IS 135 (290)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 326
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=34.16 E-value=36 Score=26.46 Aligned_cols=23 Identities=9% Similarity=-0.026 Sum_probs=18.4
Q ss_pred CccHHHHHHHHHHCCCcEEEEeC
Q 022007 41 IDGVRQTLDVLRSKGKKLIFVTN 63 (304)
Q Consensus 41 ~~~a~eal~~L~~~G~~~~i~Tn 63 (304)
=+.+.+...+++++|++++.+||
T Consensus 90 n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 90 RSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp CHHHHHHHHHHHHHTCCEEEEES
T ss_pred CHHHHHHHHHHHHCCCcEEEEeC
Confidence 33467888888899999999988
No 327
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=33.96 E-value=65 Score=23.34 Aligned_cols=21 Identities=14% Similarity=0.169 Sum_probs=14.2
Q ss_pred cHHHHHHHHHHC--CCcEEEEeC
Q 022007 43 GVRQTLDVLRSK--GKKLIFVTN 63 (304)
Q Consensus 43 ~a~eal~~L~~~--G~~~~i~Tn 63 (304)
...+.++.+++. ..+++++|+
T Consensus 72 ~g~~~~~~l~~~~~~~~ii~~s~ 94 (153)
T 3hv2_A 72 DGPTLLARIHQQYPSTTRILLTG 94 (153)
T ss_dssp CHHHHHHHHHHHCTTSEEEEECC
T ss_pred cHHHHHHHHHhHCCCCeEEEEEC
Confidence 356777777764 567777777
No 328
>2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana}
Probab=33.90 E-value=36 Score=28.91 Aligned_cols=75 Identities=15% Similarity=0.209 Sum_probs=37.6
Q ss_pred CCCCCCccccchhhHHHhhh-----ccCEEEEeE--EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHH
Q 022007 4 QNGQAPAELLSANNITALFD-----SVDAFLFDC--VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKF 76 (304)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~-----~~k~i~fDi--tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l 76 (304)
-+|.||.......-+.+-++ +.|.++.=+ ..+.....+....+.|..|++.|+++++++++ -.+....+
T Consensus 10 ~~~~~~~~~~~~~~~~~a~pyi~~~~~k~iVIKlGGs~l~~~~~~~~~~~~i~~l~~~G~~vViVhGg----G~~i~~~~ 85 (298)
T 2rd5_A 10 ATGNAPSPDYRVEILSESLPFIQKFRGKTIVVKYGGAAMTSPELKSSVVSDLVLLACVGLRPILVHGG----GPDINRYL 85 (298)
T ss_dssp --------CHHHHHHHHTHHHHHHTTTCEEEEEECTHHHHCHHHHHHHHHHHHHHHHTTCEEEEEECC----HHHHHHHH
T ss_pred ccCCCCChHHHHHHHHHHHHHHHHhcCCEEEEEECchhhCChhHHHHHHHHHHHHHHCCCCEEEEECC----cHHHHHHH
Confidence 45667665433232322222 245555544 22222223445567888899999999999983 23455667
Q ss_pred HhCCCc
Q 022007 77 HSLGVS 82 (304)
Q Consensus 77 ~~lG~~ 82 (304)
+++|++
T Consensus 86 ~~~~~~ 91 (298)
T 2rd5_A 86 KQLNIP 91 (298)
T ss_dssp HHTTCC
T ss_pred HHcCCC
Confidence 777765
No 329
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=33.75 E-value=1.9e+02 Score=23.44 Aligned_cols=38 Identities=8% Similarity=-0.007 Sum_probs=20.5
Q ss_pred HHHHHHHcCCC-CCcEEEEcCCchhhHHHHHHcCCeEEEE
Q 022007 231 MEILSKKFQIA-SSRMCMVGDRLDTDILFGQNAGCKTLLV 269 (304)
Q Consensus 231 ~~~al~~lg~~-~~~~~~IGD~~~~Di~~a~~aG~~ti~V 269 (304)
...+++..|+. |+++.+||=+ ...+.....-++.|+..
T Consensus 203 ~~~al~~~g~~vP~di~vig~d-~~~~~~~~~p~lttv~~ 241 (288)
T 3gv0_A 203 LVAGFEAAGVKIGEDVDIVSKQ-SAEFLNWIKPQIHTVNE 241 (288)
T ss_dssp HHHHHHTTTCCTTTSCEEEEEE-SSTTHHHHCTTSEEEEC
T ss_pred HHHHHHHcCCCCCCceEEEEec-ChHHHhccCCCceEEec
Confidence 55667777876 6776666632 22233333335666543
No 330
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=33.72 E-value=2.2e+02 Score=24.07 Aligned_cols=96 Identities=15% Similarity=0.275 Sum_probs=0.0
Q ss_pred cHHHHHHHHHHCCCc-EEEEeCCCCcCH------HHHHHHHHhCCCccCCCCeech--------HHHHHHHHHhCCCCCC
Q 022007 43 GVRQTLDVLRSKGKK-LIFVTNNSRRSR------RQYAHKFHSLGVSVSEDEIFSS--------SFAAAMYLKVNNFPQE 107 (304)
Q Consensus 43 ~a~eal~~L~~~G~~-~~i~Tn~s~r~~------~~~~~~l~~lG~~~~~~~i~~~--------~~~~~~~l~~~~~~~~ 107 (304)
++..+.+.|.++|++ +.++++...... +.+.+.+++.|++.....++.. ...+..+|... +.
T Consensus 174 ~~~~a~~~L~~~G~r~I~~i~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~---~~ 250 (355)
T 3e3m_A 174 AAYDMTNALLARGFRKIVFLGEKDDDWTRGAARRAGFKRAMREAGLNPDQEIRLGAPPLSIEDGVAAAELILQEY---PD 250 (355)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEESSCTTSHHHHHHHHHHHHHHHTTSCSCCEEEESCSSCCHHHHHHHHHHHHHHC---TT
T ss_pred HHHHHHHHHHHCCCCeEEEEccCcccChhHHHHHHHHHHHHHHCCcCCCccEEEecCCCCHHHHHHHHHHHHcCC---CC
Q ss_pred CeEEEEcCh----hHHHHHHHcCCcccCCCCCcchhhhhccccccccCCCccEEEEecCCC
Q 022007 108 NKVYVIGGE----GILEELRQAGYTGLGGPEDGEKRVQLKSNCLFEHDKNVGAVVVGLDPH 164 (304)
Q Consensus 108 ~~v~~~g~~----~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 164 (304)
....+...+ +....+++.|+.+ +-|.-++|+|..
T Consensus 251 ~~ai~~~nD~~A~g~~~al~~~G~~v-----------------------P~disvigfD~~ 288 (355)
T 3e3m_A 251 TDCIFCVSDMPAFGLLSRLKSIGVAV-----------------------PEQVSVVGFGNF 288 (355)
T ss_dssp CCEEEESSHHHHHHHHHHHHHHTCCT-----------------------TTTCEEECSSCC
T ss_pred CcEEEECChHHHHHHHHHHHHcCCCC-----------------------CCceEEEEECCh
No 331
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=33.72 E-value=72 Score=23.09 Aligned_cols=37 Identities=14% Similarity=0.016 Sum_probs=23.2
Q ss_pred cHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 43 GVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 43 ~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
...+.++.+++. ..+++++|+ ...........+.|.+
T Consensus 61 ~g~~~~~~l~~~~~~~pii~ls~---~~~~~~~~~~~~~g~~ 99 (155)
T 1qkk_A 61 DGLALFRKILALDPDLPMILVTG---HGDIPMAVQAIQDGAY 99 (155)
T ss_dssp CHHHHHHHHHHHCTTSCEEEEEC---GGGHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHhhCCCCCEEEEEC---CCChHHHHHHHhcCCC
Confidence 356778888764 678999998 3333344444456654
No 332
>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*
Probab=33.58 E-value=20 Score=33.53 Aligned_cols=23 Identities=22% Similarity=0.315 Sum_probs=20.0
Q ss_pred CccHHHHHHHHHHCCCcEEEEeCC
Q 022007 41 IDGVRQTLDVLRSKGKKLIFVTNN 64 (304)
Q Consensus 41 ~~~a~eal~~L~~~G~~~~i~Tn~ 64 (304)
-|.....|++||+.| +++++||+
T Consensus 248 dp~l~~~L~~Lr~~G-KlfLiTNS 270 (555)
T 2jc9_A 248 DGKLPLLLSRMKEVG-KVFLATNS 270 (555)
T ss_dssp CTHHHHHHHHHHHHS-EEEEECSS
T ss_pred ChHHHHHHHHHHHcC-CEEEEeCC
Confidence 345789999999999 99999993
No 333
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=33.33 E-value=1.9e+02 Score=23.32 Aligned_cols=17 Identities=6% Similarity=-0.097 Sum_probs=10.6
Q ss_pred HHHHHHHcCCCCCcEEEEc
Q 022007 231 MEILSKKFQIASSRMCMVG 249 (304)
Q Consensus 231 ~~~al~~lg~~~~~~~~IG 249 (304)
...+++..|+. ++..||
T Consensus 206 ~~~al~~~g~~--di~vvg 222 (291)
T 3l49_A 206 ATQALQAAGRT--DIRTYG 222 (291)
T ss_dssp HHHHHHHTTCC--SCEEEE
T ss_pred HHHHHHHcCCC--CeEEEE
Confidence 45567778887 554444
No 334
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=33.22 E-value=36 Score=22.76 Aligned_cols=39 Identities=21% Similarity=0.482 Sum_probs=25.1
Q ss_pred HHHHHHHHHHCCCcEEEEeCCCCcC-HHHHHHHHHhCCCc
Q 022007 44 VRQTLDVLRSKGKKLIFVTNNSRRS-RRQYAHKFHSLGVS 82 (304)
Q Consensus 44 a~eal~~L~~~G~~~~i~Tn~s~r~-~~~~~~~l~~lG~~ 82 (304)
..+.|+.++++|+++++..|+.+.. ..++....++-|..
T Consensus 40 irdiiksmkdngkplvvfvngasqndvnefqneakkegvs 79 (112)
T 2lnd_A 40 IRDIIKSMKDNGKPLVVFVNGASQNDVNEFQNEAKKEGVS 79 (112)
T ss_dssp HHHHHHHHTTCCSCEEEEECSCCHHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHhcCCeEEEEecCcccccHHHHHHHHHhcCcc
Confidence 4688999999999988888754332 23344444444543
No 335
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=33.15 E-value=95 Score=21.01 Aligned_cols=51 Identities=10% Similarity=0.066 Sum_probs=27.8
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
+++.+++|+.+ +-.+..+.++++++. +.+++++|+.. .........+.|..
T Consensus 47 ~~dlil~D~~l-----~~~~g~~~~~~l~~~~~~~~ii~~s~~~---~~~~~~~~~~~g~~ 99 (120)
T 1tmy_A 47 KPDIVTMDITM-----PEMNGIDAIKEIMKIDPNAKIIVCSAMG---QQAMVIEAIKAGAK 99 (120)
T ss_dssp CCSEEEEECSC-----GGGCHHHHHHHHHHHCTTCCEEEEECTT---CHHHHHHHHHTTCC
T ss_pred CCCEEEEeCCC-----CCCcHHHHHHHHHhhCCCCeEEEEeCCC---CHHHHHHHHHhCcc
Confidence 35666666521 112346778887763 57888888832 22333333345654
No 336
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=33.04 E-value=67 Score=22.76 Aligned_cols=51 Identities=18% Similarity=0.156 Sum_probs=29.1
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHC----CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK----GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~----G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++++++|+ .-+-....+.++.+++. ..+++++|+. ..........+.|.+
T Consensus 59 ~~dlii~D~-----~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~---~~~~~~~~~~~~g~~ 113 (143)
T 2qvg_A 59 HPKLILLDI-----NIPKMNGIEFLKELRDDSSFTDIEVFVLTAA---YTSKDKLAFESLNIR 113 (143)
T ss_dssp CCSEEEEET-----TCTTSCHHHHHHHHTTSGGGTTCEEEEEESC---CCHHHHHHHTTTTCC
T ss_pred CCCEEEEec-----CCCCCCHHHHHHHHHcCccccCCcEEEEeCC---CCHHHHHHHHhcCCC
Confidence 356666655 11112356888888864 5778888873 223334444456654
No 337
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=32.79 E-value=53 Score=28.86 Aligned_cols=34 Identities=15% Similarity=0.073 Sum_probs=26.2
Q ss_pred EcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcC
Q 022007 35 WKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRS 68 (304)
Q Consensus 35 ~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~ 68 (304)
.....--+...++++.++++|.+++.+||+..-+
T Consensus 114 iS~SG~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~ 147 (375)
T 2zj3_A 114 LSQSGETADTLMGLRYCKERGALTVGITNTVGSS 147 (375)
T ss_dssp EESSSCCHHHHHHHHHHHHTTCEEEEEESCTTCH
T ss_pred EeCCCCCHHHHHHHHHHHHcCCcEEEEECCCCCh
Confidence 3344456678999999999999999999955433
No 338
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=32.73 E-value=96 Score=23.25 Aligned_cols=58 Identities=9% Similarity=0.129 Sum_probs=40.5
Q ss_pred hhccCEEEEeE-EEEcCCccCccHHHHHHHHHH---CCCcEEEEeCCC--CcCHHHHHHHHHhCCCcc
Q 022007 22 FDSVDAFLFDC-VIWKGDKLIDGVRQTLDVLRS---KGKKLIFVTNNS--RRSRRQYAHKFHSLGVSV 83 (304)
Q Consensus 22 ~~~~k~i~fDi-tL~~~~~~~~~a~eal~~L~~---~G~~~~i~Tn~s--~r~~~~~~~~l~~lG~~~ 83 (304)
+.++++++|=. |- .+. +|. ..++..|.. +|+++++..+.+ +.....+.+.|+++|+.+
T Consensus 49 ~~~~d~ii~Gspty-~g~--~p~-~~fl~~l~~~~l~gk~v~~fgs~g~~g~a~~~l~~~l~~~G~~~ 112 (161)
T 3hly_A 49 VSSARGIVLGTPPS-QPS--EAV-ATALSTIFAAAHNKQAIGLFDSYGGDDEPIDALLAQFRNLGLHT 112 (161)
T ss_dssp HHHCSEEEEECCBS-SCC--HHH-HHHHHHHHHHCCTTSEEEEECCCCSSBCCHHHHHHHHHHTTCEE
T ss_pred HHhCCEEEEEcCCc-CCc--hhH-HHHHHHHHhhhhCCCEEEEEEcCCCCcHHHHHHHHHHHHCCCEE
Confidence 35789998876 54 343 343 788888775 688887665432 345778888999999874
No 339
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=32.69 E-value=38 Score=27.95 Aligned_cols=50 Identities=10% Similarity=0.131 Sum_probs=35.4
Q ss_pred EeE-EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 30 FDC-VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 30 fDi-tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
-|. +....+...||-..|=+.|.+.|+|.+++|.. +.....+.|++-||-
T Consensus 65 pDfvI~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~---p~~K~kd~l~~~g~G 115 (283)
T 1qv9_A 65 PDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGDA---PGLKVKDEMEEQGLG 115 (283)
T ss_dssp CSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEEG---GGGGGHHHHHHTTCE
T ss_pred CCEEEEECCCCCCCCchHHHHHHHhCCCCEEEEcCC---cchhhHHHHHhcCCc
Confidence 344 34455678888888888889999999999983 322244777777765
No 340
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=32.57 E-value=59 Score=23.59 Aligned_cols=69 Identities=16% Similarity=0.055 Sum_probs=39.7
Q ss_pred cchhhHHHhhh-ccCEEEEeE-EE--Ec------------CCccCcc----HHHHHHHHH-----HCCCcEEEEeCCCCc
Q 022007 13 LSANNITALFD-SVDAFLFDC-VI--WK------------GDKLIDG----VRQTLDVLR-----SKGKKLIFVTNNSRR 67 (304)
Q Consensus 13 ~~~~~~~~~~~-~~k~i~fDi-tL--~~------------~~~~~~~----a~eal~~L~-----~~G~~~~i~Tn~s~r 67 (304)
.+.+++.+++. +-+.+++|+ +- |. +...+|- ..+.+..+. .++.++++... ++.
T Consensus 7 is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~~ip~~~~~~~~~~~~l~~~~~~~~~~~ivv~C~-sG~ 85 (134)
T 1vee_A 7 GSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLSLKFKDPENTTLYILDK-FDG 85 (134)
T ss_dssp CCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCCEECCCCGGGHHHHHHHHHTTCSCGGGCEEEEECS-SST
T ss_pred cCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCceEEeecccccChhHHHHHHHHhCCCCCCEEEEEeC-CCC
Confidence 45567777776 457899999 32 21 1112331 123555664 34567766665 444
Q ss_pred CHHHHHHHHHhCCCc
Q 022007 68 SRRQYAHKFHSLGVS 82 (304)
Q Consensus 68 ~~~~~~~~l~~lG~~ 82 (304)
........|+++|+.
T Consensus 86 RS~~aa~~L~~~G~~ 100 (134)
T 1vee_A 86 NSELVAELVALNGFK 100 (134)
T ss_dssp THHHHHHHHHHHTCS
T ss_pred cHHHHHHHHHHcCCc
Confidence 445566778888874
No 341
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=32.38 E-value=1.2e+02 Score=21.71 Aligned_cols=21 Identities=10% Similarity=0.189 Sum_probs=15.6
Q ss_pred cHHHHHHHHHHC--CCcEEEEeC
Q 022007 43 GVRQTLDVLRSK--GKKLIFVTN 63 (304)
Q Consensus 43 ~a~eal~~L~~~--G~~~~i~Tn 63 (304)
...+.++.+++. ..+++++|+
T Consensus 65 ~g~~~~~~l~~~~~~~~ii~ls~ 87 (154)
T 2rjn_A 65 GGEVFLEQVAKSYPDIERVVISG 87 (154)
T ss_dssp CHHHHHHHHHHHCTTSEEEEEEC
T ss_pred CHHHHHHHHHHhCCCCcEEEEec
Confidence 356778888764 578888888
No 342
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=32.14 E-value=70 Score=22.58 Aligned_cols=21 Identities=14% Similarity=0.251 Sum_probs=14.6
Q ss_pred cHHHHHHHHHH----CCCcEEEEeC
Q 022007 43 GVRQTLDVLRS----KGKKLIFVTN 63 (304)
Q Consensus 43 ~a~eal~~L~~----~G~~~~i~Tn 63 (304)
+..+.++.+++ ...+++++|.
T Consensus 64 ~g~~~~~~l~~~~~~~~~~ii~~s~ 88 (140)
T 3grc_A 64 DGVSLIRALRRDSRTRDLAIVVVSA 88 (140)
T ss_dssp CHHHHHHHHHTSGGGTTCEEEEECT
T ss_pred CHHHHHHHHHhCcccCCCCEEEEec
Confidence 45677777776 3567777776
No 343
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=32.07 E-value=1.2e+02 Score=20.76 Aligned_cols=21 Identities=19% Similarity=0.210 Sum_probs=14.4
Q ss_pred cHHHHHHHHHHC-CCcEEEEeC
Q 022007 43 GVRQTLDVLRSK-GKKLIFVTN 63 (304)
Q Consensus 43 ~a~eal~~L~~~-G~~~~i~Tn 63 (304)
+..+.++.+++. ..+++++|+
T Consensus 60 ~g~~~~~~lr~~~~~~ii~~t~ 81 (120)
T 3f6p_A 60 DGVEVCREVRKKYDMPIIMLTA 81 (120)
T ss_dssp HHHHHHHHHHTTCCSCEEEEEE
T ss_pred CHHHHHHHHHhcCCCCEEEEEC
Confidence 346777777753 567888887
No 344
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=31.63 E-value=1.2e+02 Score=20.46 Aligned_cols=22 Identities=14% Similarity=0.134 Sum_probs=15.9
Q ss_pred cHHHHHHHHHHC--CCcEEEEeCC
Q 022007 43 GVRQTLDVLRSK--GKKLIFVTNN 64 (304)
Q Consensus 43 ~a~eal~~L~~~--G~~~~i~Tn~ 64 (304)
+..+.++.+++. ..+++++|+.
T Consensus 58 ~g~~~~~~l~~~~~~~~ii~~s~~ 81 (121)
T 2pl1_A 58 DGLSLIRRWRSNDVSLPILVLTAR 81 (121)
T ss_dssp CHHHHHHHHHHTTCCSCEEEEESC
T ss_pred CHHHHHHHHHhcCCCCCEEEEecC
Confidence 356788888864 4678888873
No 345
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=31.44 E-value=44 Score=28.50 Aligned_cols=34 Identities=21% Similarity=0.097 Sum_probs=26.3
Q ss_pred EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCC
Q 022007 33 VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSR 66 (304)
Q Consensus 33 tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~ 66 (304)
+......--|...++++.++++|.+++.+|++..
T Consensus 145 I~IS~SG~T~~vi~al~~Ak~~Ga~~IaIT~~~~ 178 (306)
T 1nri_A 145 VGIAASGRTPYVIAGLQYAKSLGALTISIASNPK 178 (306)
T ss_dssp EEECTTSCCHHHHHHHHHHHHHTCEEEEEESSTT
T ss_pred EEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 3344445556789999999999999999999543
No 346
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=31.29 E-value=1.3e+02 Score=20.64 Aligned_cols=37 Identities=16% Similarity=0.053 Sum_probs=22.3
Q ss_pred cHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 43 GVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 43 ~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
+..+.++.+++. ..+++++|+.. ........-+.|.+
T Consensus 61 ~g~~~~~~l~~~~~~~~ii~~s~~~---~~~~~~~~~~~ga~ 99 (126)
T 1dbw_A 61 SGVELLRNLGDLKINIPSIVITGHG---DVPMAVEAMKAGAV 99 (126)
T ss_dssp CHHHHHHHHHHTTCCCCEEEEECTT---CHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHhcCCCCCEEEEECCC---CHHHHHHHHHhCHH
Confidence 356788888874 57888898832 23333333345654
No 347
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=31.26 E-value=39 Score=27.47 Aligned_cols=32 Identities=19% Similarity=0.033 Sum_probs=24.5
Q ss_pred EEEcCCccCccHHHHHHHHHHCCCcEEEEeCC
Q 022007 33 VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNN 64 (304)
Q Consensus 33 tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~ 64 (304)
++.....--+...++++.++++|.+++.+|++
T Consensus 113 I~iS~SG~t~~~i~~~~~Ak~~G~~vI~IT~~ 144 (243)
T 3cvj_A 113 MIISNSGRNTVPVEMAIESRNIGAKVIAMTSM 144 (243)
T ss_dssp EEECSSCCSHHHHHHHHHHHHHTCEEEEEECH
T ss_pred EEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34444455666889999999999999999983
No 348
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=30.96 E-value=61 Score=24.44 Aligned_cols=59 Identities=10% Similarity=0.192 Sum_probs=40.0
Q ss_pred hhhccCEEEEeE-EEEcCCccCccHHHHHHHHHH---CCCcEEEEeCCCC--cCHHHHHHHHHhCCCcc
Q 022007 21 LFDSVDAFLFDC-VIWKGDKLIDGVRQTLDVLRS---KGKKLIFVTNNSR--RSRRQYAHKFHSLGVSV 83 (304)
Q Consensus 21 ~~~~~k~i~fDi-tL~~~~~~~~~a~eal~~L~~---~G~~~~i~Tn~s~--r~~~~~~~~l~~lG~~~ 83 (304)
-+.++++++|=. |-. +. +| ..+++..|.. .|+++.+..+.+. .....+.+.|+++|+.+
T Consensus 53 ~~~~~d~ii~Gspty~-g~--~p-~~~~l~~l~~~~~~~k~va~fgs~g~~~~a~~~l~~~l~~~G~~~ 117 (159)
T 3fni_A 53 LVGRCTGLVIGMSPAA-SA--AS-IQGALSTILGSVNEKQAVGIFETGGGDDEPIDPLLSKFRNLGLTT 117 (159)
T ss_dssp HHHTEEEEEEECCBTT-SH--HH-HHHHHHHHHHHCCTTSEEEEECCSSSCBCCHHHHHHHHHHTTCEE
T ss_pred HHHhCCEEEEEcCcCC-CC--cc-HHHHHHHHHhhcccCCEEEEEEcCCCCcHHHHHHHHHHHHCCCEE
Confidence 345688887766 543 43 44 4778887765 6788877766332 24678888999999984
No 349
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=30.91 E-value=66 Score=22.16 Aligned_cols=67 Identities=9% Similarity=0.023 Sum_probs=36.7
Q ss_pred cchhhHHHhhhccCEEEEeE-EE--EcCCccCccH--------HHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCC
Q 022007 13 LSANNITALFDSVDAFLFDC-VI--WKGDKLIDGV--------RQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGV 81 (304)
Q Consensus 13 ~~~~~~~~~~~~~k~i~fDi-tL--~~~~~~~~~a--------~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~ 81 (304)
.+.+.+.+++.+-+.+++|+ .- |.. ..+||| .+.+..+ .++.++++..+ ++.........|+++|+
T Consensus 7 i~~~~l~~~~~~~~~~liDvR~~~e~~~-ghIpgA~~ip~~~l~~~~~~l-~~~~~ivvyc~-~g~rs~~a~~~L~~~G~ 83 (108)
T 1gmx_A 7 INVADAHQKLQEKEAVLVDIRDPQSFAM-GHAVQAFHLTNDTLGAFMRDN-DFDTPVMVMCY-HGNSSKGAAQYLLQQGY 83 (108)
T ss_dssp ECHHHHHHHHHTTCCEEEECSCHHHHHH-CEETTCEECCHHHHHHHHHHS-CTTSCEEEECS-SSSHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHhCCCCEEEEcCCHHHHHh-CCCccCEeCCHHHHHHHHHhc-CCCCCEEEEcC-CCchHHHHHHHHHHcCC
Confidence 45667777777667899999 32 221 122332 2333332 34566766665 33334455566666776
Q ss_pred c
Q 022007 82 S 82 (304)
Q Consensus 82 ~ 82 (304)
+
T Consensus 84 ~ 84 (108)
T 1gmx_A 84 D 84 (108)
T ss_dssp S
T ss_pred c
Confidence 4
No 350
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus}
Probab=30.53 E-value=34 Score=24.33 Aligned_cols=53 Identities=8% Similarity=0.102 Sum_probs=34.4
Q ss_pred ccCEEEEeE--E-EEcCCccCccHHHHHHHHHH-CCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDC--V-IWKGDKLIDGVRQTLDVLRS-KGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDi--t-L~~~~~~~~~a~eal~~L~~-~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
..+.+++|+ | ..++.. +.--..+.+++++ +|.++.++ | ....+.+.|+..|++
T Consensus 47 ~~~~vvlDls~v~~iDSsG-l~~L~~~~~~~~~~~g~~l~l~-~----~~~~v~~~l~~~gl~ 103 (121)
T 3t6o_A 47 QPRKVLIDLEGVEFFGSSF-IELLVRGWKRIKEDQQGVFALC-S----VSPYCVEVLQVTHID 103 (121)
T ss_dssp SSCEEEEECTTCCEECHHH-HHHHHHHHHHHTTSTTCEEEEE-S----CCHHHHHHHTTCSGG
T ss_pred CCCeEEEECCCCCEEcHHH-HHHHHHHHHHHHHhcCCEEEEE-e----CCHHHHHHHHHhCcc
Confidence 567899999 3 333222 1112466677778 88888654 4 345677888888887
No 351
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=30.51 E-value=2.4e+02 Score=23.54 Aligned_cols=85 Identities=16% Similarity=0.274 Sum_probs=50.7
Q ss_pred ccHHHHHHHHHHCCCc-EEEEeCCCCcC-----HHHHHHHHHhCCCccCCCCeec-------hHHHHHHHHHhCCCCCCC
Q 022007 42 DGVRQTLDVLRSKGKK-LIFVTNNSRRS-----RRQYAHKFHSLGVSVSEDEIFS-------SSFAAAMYLKVNNFPQEN 108 (304)
Q Consensus 42 ~~a~eal~~L~~~G~~-~~i~Tn~s~r~-----~~~~~~~l~~lG~~~~~~~i~~-------~~~~~~~~l~~~~~~~~~ 108 (304)
.++..+.+.|.++|++ +.++++....+ .+.+.+.+++.|+++....++. ....+..+|.... ..
T Consensus 167 ~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~---~~ 243 (338)
T 3dbi_A 167 QTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIANGKWTPASGAEGVEMLLERGA---KF 243 (338)
T ss_dssp HHHHHHHHHHHHTTCCSEEEECCCTTCHHHHHHHHHHHHHHHHTTCCCCGGGEECCCSSHHHHHHHHHHHHHTTC---CC
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHHHCCCCCCcceEEeCCCCHHHHHHHHHHHHcCCC---CC
Confidence 3567899999999865 77887743221 1345566778888755433322 1233445665432 22
Q ss_pred eEEEEcCh----hHHHHHHHcCCcc
Q 022007 109 KVYVIGGE----GILEELRQAGYTG 129 (304)
Q Consensus 109 ~v~~~g~~----~~~~~l~~~g~~~ 129 (304)
...+...+ +..+.+++.|+.+
T Consensus 244 ~ai~~~nd~~A~g~~~al~~~G~~v 268 (338)
T 3dbi_A 244 SALVASNDDMAIGAMKALHERGVAV 268 (338)
T ss_dssp SEEEESSHHHHHHHHHHHHHTTCCT
T ss_pred eEEEECChHHHHHHHHHHHHcCCCC
Confidence 35555555 3468899999875
No 352
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=30.29 E-value=90 Score=26.74 Aligned_cols=37 Identities=11% Similarity=0.113 Sum_probs=29.4
Q ss_pred CccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCC
Q 022007 41 IDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLG 80 (304)
Q Consensus 41 ~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG 80 (304)
.+...++++.+++.|+++.+.||.+. .+..+.|.+.|
T Consensus 156 ~~~l~~ll~~~~~~g~~i~l~TNG~~---~e~l~~L~~~g 192 (342)
T 2yx0_A 156 YPYMGDLVEEFHKRGFTTFIVTNGTI---PERLEEMIKED 192 (342)
T ss_dssp STTHHHHHHHHHHTTCEEEEEECSCC---HHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHCCCcEEEEcCCCc---HHHHHHHHhcC
Confidence 45788999999999999999999664 45566677665
No 353
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=30.22 E-value=51 Score=23.60 Aligned_cols=52 Identities=21% Similarity=0.259 Sum_probs=29.0
Q ss_pred hccCEEEEeEEEEcCCccCccHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 23 DSVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 23 ~~~k~i~fDitL~~~~~~~~~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
..++++++|+.+ +-.+..+.++.+++. ..+++++|+. ..........+.|.+
T Consensus 66 ~~~dlvi~D~~l-----~~~~g~~~~~~l~~~~~~~~ii~lt~~---~~~~~~~~~~~~ga~ 119 (146)
T 4dad_A 66 DAFDILMIDGAA-----LDTAELAAIEKLSRLHPGLTCLLVTTD---ASSQTLLDAMRAGVR 119 (146)
T ss_dssp TTCSEEEEECTT-----CCHHHHHHHHHHHHHCTTCEEEEEESC---CCHHHHHHHHTTTEE
T ss_pred CCCCEEEEeCCC-----CCccHHHHHHHHHHhCCCCcEEEEeCC---CCHHHHHHHHHhCCc
Confidence 346666666521 112356778888765 5778899983 323333333355543
No 354
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=29.85 E-value=1e+02 Score=21.01 Aligned_cols=36 Identities=19% Similarity=0.167 Sum_probs=22.5
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHH--CCCcEEEEeCC
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRS--KGKKLIFVTNN 64 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~--~G~~~~i~Tn~ 64 (304)
.++.+++|+.+ +-.+..+.++.+++ ...+++++|+.
T Consensus 47 ~~dlvl~D~~l-----~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (124)
T 1srr_A 47 RPDLVLLDMKI-----PGMDGIEILKRMKVIDENIRVIIMTAY 84 (124)
T ss_dssp CCSEEEEESCC-----TTCCHHHHHHHHHHHCTTCEEEEEESS
T ss_pred CCCEEEEecCC-----CCCCHHHHHHHHHHhCCCCCEEEEEcc
Confidence 46666666522 11234677888876 36788889883
No 355
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=29.83 E-value=79 Score=22.13 Aligned_cols=26 Identities=15% Similarity=0.146 Sum_probs=20.7
Q ss_pred CHHHHHHHHHHHHcCCCce-EEEecCCC
Q 022007 166 NYYKLQYGTLCIRENPGCL-FIATNRDA 192 (304)
Q Consensus 166 ~~~~~~~~l~~l~~~~~~~-~i~tn~~~ 192 (304)
.++++.+.++.|+++ |.+ +++||.+.
T Consensus 19 ~~~~~~~~l~~L~~~-G~~~~i~S~~~~ 45 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKN-GVGTVILSNDPG 45 (137)
T ss_dssp HHHHHHHHHHHHHHT-TCEEEEEECSCC
T ss_pred cCccHHHHHHHHHHC-CCEEEEEeCCCH
Confidence 478889999999887 665 67899765
No 356
>2poc_A D-fructose-6- PH, isomerase domain of glutamine-fructose-6-phosphat transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=29.65 E-value=63 Score=28.22 Aligned_cols=33 Identities=12% Similarity=0.023 Sum_probs=25.6
Q ss_pred cCCccCccHHHHHHHHHHCCCcEEEEeCCCCcC
Q 022007 36 KGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRS 68 (304)
Q Consensus 36 ~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~ 68 (304)
....--+.+.++++.++++|.+++.+||+..-+
T Consensus 105 S~SG~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~ 137 (367)
T 2poc_A 105 SQSGETADSILALQYCLERGALTVGIVNSVGSS 137 (367)
T ss_dssp ESSSCCHHHHHHHHHHHHTTCEEEEEESSTTSH
T ss_pred eCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCh
Confidence 344456678899999999999999999954333
No 357
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=29.51 E-value=1e+02 Score=24.02 Aligned_cols=51 Identities=18% Similarity=0.320 Sum_probs=31.2
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++++++|+.+ +-.+..+.++.+++. ..+++++|+ ..........-+.|.+
T Consensus 46 ~~dlvllD~~l-----~~~~g~~~~~~lr~~~~~~~ii~ls~---~~~~~~~~~~~~~ga~ 98 (225)
T 1kgs_A 46 PFDVVILDIML-----PVHDGWEILKSMRESGVNTPVLMLTA---LSDVEYRVKGLNMGAD 98 (225)
T ss_dssp CCSEEEEESCC-----SSSCHHHHHHHHHHTTCCCCEEEEES---SCHHHHHHHTCCCCCS
T ss_pred CCCEEEEeCCC-----CCCCHHHHHHHHHhcCCCCCEEEEeC---CCCHHHHHHHHhCCcc
Confidence 45666666522 112357888888875 578999998 4444444444456654
No 358
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=29.44 E-value=1.9e+02 Score=23.29 Aligned_cols=22 Identities=14% Similarity=0.143 Sum_probs=15.8
Q ss_pred HHHHHHHHcCCC-CCcEEEEcCC
Q 022007 230 MMEILSKKFQIA-SSRMCMVGDR 251 (304)
Q Consensus 230 ~~~~al~~lg~~-~~~~~~IGD~ 251 (304)
....+++..|+. |+++-+||=+
T Consensus 192 g~~~al~~~g~~vP~di~vig~d 214 (277)
T 3hs3_A 192 EIIKEAKRRNLKIPDDFQLVGYD 214 (277)
T ss_dssp HHHHHHHHTTCCTTTTCEEECSB
T ss_pred HHHHHHHHcCCCCCCceEEEeeC
Confidence 455677788886 7888777744
No 359
>1obo_A Flavodoxin; electron transfer, flavoprotein, electron transport; HET: FMN; 1.2A {Anabaena SP} SCOP: c.23.5.1 PDB: 2v5v_A* 1dx9_A 1rcf_A* 1flv_A* 1obv_A* 2v5u_A* 1ftg_A 1qhe_A 2kqu_A 3esy_A* 3esz_A* 3esx_A*
Probab=29.34 E-value=66 Score=24.15 Aligned_cols=62 Identities=13% Similarity=0.206 Sum_probs=37.1
Q ss_pred hhccCEEEEeEEEEcCCccCccHHHHHHHHHH---CCCcEEEE-eCCC-------CcCHHHHHHHHHhCCCcc
Q 022007 22 FDSVDAFLFDCVIWKGDKLIDGVRQTLDVLRS---KGKKLIFV-TNNS-------RRSRRQYAHKFHSLGVSV 83 (304)
Q Consensus 22 ~~~~k~i~fDitL~~~~~~~~~a~eal~~L~~---~G~~~~i~-Tn~s-------~r~~~~~~~~l~~lG~~~ 83 (304)
+.+++.|+|=.-.|....+.+.+.++++.|.. .|+++.+. |+++ ......+.+.|.++|+.+
T Consensus 44 l~~~d~ii~g~p~y~~g~~p~~~~~fl~~l~~~~l~~k~~~~f~tg~~~~~~~~~~~a~~~l~~~l~~~g~~~ 116 (169)
T 1obo_A 44 LNDYQYLIIGCPTLNIGELQSDWEGLYSELDDVDFNGKLVAYFGTGDQIGYADNFQDAIGILEEKISQRGGKT 116 (169)
T ss_dssp GGGCSEEEEEEEEETTTEECHHHHHHHTTGGGCCCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHHHTTCEE
T ss_pred HhhCCEEEEEEeeCCCCcCCHHHHHHHHHhhhcCcCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEE
Confidence 45788888855334333444446678877765 57777555 4332 123356667777788763
No 360
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=29.25 E-value=58 Score=28.15 Aligned_cols=38 Identities=16% Similarity=0.165 Sum_probs=28.5
Q ss_pred eE-EEEcCCccCccHHHHHHHHHHCCCcEEEEeCCCCcC
Q 022007 31 DC-VIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRS 68 (304)
Q Consensus 31 Di-tL~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~ 68 (304)
|+ +......--+...++++.++++|.+++.+||+..-+
T Consensus 102 dlvI~iS~SG~T~e~l~a~~~ak~~Ga~vIaIT~~~~S~ 140 (342)
T 1j5x_A 102 GLAFLFSRTGNTTEVLLANDVLKKRNHRTIGITIEEESR 140 (342)
T ss_dssp EEEEEECSSSCCHHHHHHHHHHHHTTEEEEEEESCTTSH
T ss_pred eEEEEEcCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCH
Confidence 45 444445566778999999999999999999954333
No 361
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=29.04 E-value=1.2e+02 Score=24.27 Aligned_cols=51 Identities=24% Similarity=0.145 Sum_probs=29.9
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++++++|+. -+-.+..+.++.|++. ..+++++|. ..........-+.|.+
T Consensus 67 ~~dlvllD~~-----lp~~~g~~~~~~lr~~~~~~~ii~lt~---~~~~~~~~~~~~~Ga~ 119 (250)
T 3r0j_A 67 RPDAVILDVX-----MPGMDGFGVLRRLRADGIDAPALFLTA---RDSLQDKIAGLTLGGD 119 (250)
T ss_dssp CCSEEEEESC-----CSSSCHHHHHHHHHHTTCCCCEEEEEC---STTHHHHHHHHTSTTC
T ss_pred CCCEEEEeCC-----CCCCCHHHHHHHHHhcCCCCCEEEEEC---CCCHHHHHHHHHcCCc
Confidence 3555555552 2223457888888876 468889988 3333334444456654
No 362
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=28.97 E-value=69 Score=27.50 Aligned_cols=33 Identities=15% Similarity=0.064 Sum_probs=25.5
Q ss_pred cCCccCccHHHHHHHHHHCCCcEEEEeCCCCcC
Q 022007 36 KGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRS 68 (304)
Q Consensus 36 ~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~ 68 (304)
....--+.+.++++.++++|.+++.+||+..-+
T Consensus 82 S~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~ 114 (329)
T 3eua_A 82 SHSGNTPETVKAAAFARGKGALTIAMTFKPESP 114 (329)
T ss_dssp ESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSH
T ss_pred cCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCh
Confidence 333456678899999999999999999954433
No 363
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=28.66 E-value=47 Score=28.47 Aligned_cols=71 Identities=14% Similarity=0.155 Sum_probs=44.6
Q ss_pred ccccchhhHHHhhhccCEEEEeE-EEEcCCc-cCccHHHHHHHHHHCCC--cEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 10 AELLSANNITALFDSVDAFLFDC-VIWKGDK-LIDGVRQTLDVLRSKGK--KLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 10 ~~~~~~~~~~~~~~~~k~i~fDi-tL~~~~~-~~~~a~eal~~L~~~G~--~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
...++.+.+.++++.+...=..- ++.-|.. ..++..+.++.+++.+. .+.+.||.+.. .+..+.|.+.|++
T Consensus 47 ~~~ls~e~i~~~i~~~~~~g~~~i~~tGGEPll~~~l~~li~~~~~~~~~~~i~i~TNG~ll--~~~~~~L~~~g~~ 121 (340)
T 1tv8_A 47 NELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQIDGIEDIGLTTNGLLL--KKHGQKLYDAGLR 121 (340)
T ss_dssp GGSCCHHHHHHHHHHHHHTTCCEEEEESSCGGGSTTHHHHHHHHTTCTTCCEEEEEECSTTH--HHHHHHHHHHTCC
T ss_pred cCCCCHHHHHHHHHHHHHCCCCEEEEeCCCccchhhHHHHHHHHHhCCCCCeEEEEeCccch--HHHHHHHHHCCCC
Confidence 34467777777666432100111 4444443 34677899999998876 78899996643 3467778877765
No 364
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=28.46 E-value=17 Score=25.52 Aligned_cols=66 Identities=11% Similarity=0.097 Sum_probs=34.8
Q ss_pred cchhhHHHhhhccCEEEEeE-EE--EcCCccCccHH-----HHHHHHH--HCCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 13 LSANNITALFDSVDAFLFDC-VI--WKGDKLIDGVR-----QTLDVLR--SKGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 13 ~~~~~~~~~~~~~k~i~fDi-tL--~~~~~~~~~a~-----eal~~L~--~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.+.+++.+++++ .+++|+ .- |. ...+|||. +.-+.+. .++.++++..+ ++.........|+++|++
T Consensus 6 is~~el~~~l~~--~~iiDvR~~~e~~-~ghIpgA~~ip~~~l~~~~~~l~~~~~ivvyC~-~G~rs~~aa~~L~~~G~~ 81 (108)
T 3gk5_A 6 INAADLYENIKA--YTVLDVREPFELI-FGSIANSINIPISELREKWKILERDKKYAVICA-HGNRSAAAVEFLSQLGLN 81 (108)
T ss_dssp ECHHHHHHTTTT--CEEEECSCHHHHT-TCBCTTCEECCHHHHHHHGGGSCTTSCEEEECS-SSHHHHHHHHHHHTTTCC
T ss_pred eCHHHHHHHHcC--CEEEECCCHHHHh-cCcCCCCEEcCHHHHHHHHHhCCCCCeEEEEcC-CCcHHHHHHHHHHHcCCC
Confidence 345667777766 788999 42 22 23445541 2222222 23456666555 333344555666667763
No 365
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=28.30 E-value=1.2e+02 Score=20.99 Aligned_cols=51 Identities=18% Similarity=0.082 Sum_probs=27.4
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHH--CCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRS--KGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~--~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++.+++|+.+ +-.+..+.++.+++ .+.+++++|+.. .........+.|.+
T Consensus 47 ~~dlvl~D~~l-----~~~~g~~~~~~l~~~~~~~~ii~~s~~~---~~~~~~~~~~~ga~ 99 (132)
T 3crn_A 47 FFNLALFXIKL-----PDMEGTELLEKAHKLRPGMKKIMVTGYA---SLENSVFSLNAGAD 99 (132)
T ss_dssp CCSEEEECSBC-----SSSBHHHHHHHHHHHCTTSEEEEEESCC---CHHHHHHHHHTTCS
T ss_pred CCCEEEEecCC-----CCCchHHHHHHHHhhCCCCcEEEEeccc---cHHHHHHHHhccch
Confidence 35555555522 11234677777775 357888888832 22333333345654
No 366
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=28.27 E-value=2.7e+02 Score=23.51 Aligned_cols=86 Identities=15% Similarity=0.191 Sum_probs=50.2
Q ss_pred CccHHHHHHHHHHCCCc-EEEEeCC---------C---------CcC----HHHHHHHHHhCCCccCCCCeec-------
Q 022007 41 IDGVRQTLDVLRSKGKK-LIFVTNN---------S---------RRS----RRQYAHKFHSLGVSVSEDEIFS------- 90 (304)
Q Consensus 41 ~~~a~eal~~L~~~G~~-~~i~Tn~---------s---------~r~----~~~~~~~l~~lG~~~~~~~i~~------- 90 (304)
..++..+.+.|.++|++ +.+++.. . ... ...+.+.|++.|++.....++.
T Consensus 174 ~~~~~~a~~~L~~~G~r~I~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~~ 253 (366)
T 3h5t_A 174 RKAIAPAAQALIDAGHRKIGILSIRLDRANNDGEVTRERLENAQYQVQRDRVRGAMEVFIEAGIDPGTVPIMECWINNRQ 253 (366)
T ss_dssp HHHTHHHHHHHHHTTCCSEEEEEECCSSSCCCEECCHHHHHTCCCTTHHHHHHHHHHHHHHHTCCGGGSCEEEESSCCHH
T ss_pred HHHHHHHHHHHHHCCCCcEEEEecccccccccCccccccccccccchHHHHHHHHHHHHHHCCCCCCcceEEEcCCCCHH
Confidence 34567999999999866 6777611 0 111 2456667888888754333321
Q ss_pred -hHHHHHHHHHhCCCCCCCeEEEEcCh----hHHHHHHHcCCcc
Q 022007 91 -SSFAAAMYLKVNNFPQENKVYVIGGE----GILEELRQAGYTG 129 (304)
Q Consensus 91 -~~~~~~~~l~~~~~~~~~~v~~~g~~----~~~~~l~~~g~~~ 129 (304)
....+..+|.... .....+...+ +..+.+++.|+.+
T Consensus 254 ~~~~~~~~ll~~~~---~~~ai~~~nD~~A~g~~~al~~~G~~v 294 (366)
T 3h5t_A 254 HNFEVAKELLETHP---DLTAVLCTVDALAFGVLEYLKSVGKSA 294 (366)
T ss_dssp HHHHHHHHHHHHCT---TCCEEEESSHHHHHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHcCCC---CCcEEEECCcHHHHHHHHHHHHcCCCC
Confidence 1223445565432 1235555555 4568899999876
No 367
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=28.21 E-value=29 Score=28.23 Aligned_cols=29 Identities=17% Similarity=0.162 Sum_probs=22.9
Q ss_pred cCCccCccHHHHHHHHHHCCCcEEEEeCCCC
Q 022007 36 KGDKLIDGVRQTLDVLRSKGKKLIFVTNNSR 66 (304)
Q Consensus 36 ~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~ 66 (304)
.....+|++.++++.|+ +|+++ ++||...
T Consensus 123 ~~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~ 151 (264)
T 1yv9_A 123 DTELSYEKVVLATLAIQ-KGALF-IGTNPDK 151 (264)
T ss_dssp CTTCCHHHHHHHHHHHH-TTCEE-EESCCCS
T ss_pred CCCcCHHHHHHHHHHHh-CCCEE-EEECCCC
Confidence 34457889999999997 89887 8899543
No 368
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=27.82 E-value=69 Score=21.91 Aligned_cols=35 Identities=17% Similarity=0.090 Sum_probs=21.2
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHC----CCcEEEEeC
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK----GKKLIFVTN 63 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~----G~~~~i~Tn 63 (304)
.++.+++|+.+ +-.+..+.++.+++. ..+++++|+
T Consensus 45 ~~dlvi~D~~l-----~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 83 (124)
T 1mb3_A 45 KPDLILMDIQL-----PEISGLEVTKWLKEDDDLAHIPVVAVTA 83 (124)
T ss_dssp CCSEEEEESBC-----SSSBHHHHHHHHHHSTTTTTSCEEEEC-
T ss_pred CCCEEEEeCCC-----CCCCHHHHHHHHHcCccccCCcEEEEEC
Confidence 45666666522 112346788888864 567888887
No 369
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=27.77 E-value=1.3e+02 Score=21.12 Aligned_cols=51 Identities=14% Similarity=0.143 Sum_probs=28.2
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++.+++|+.+ +--+..+.++.|++. ..+++++|+. ..........+.|..
T Consensus 48 ~~dlvllD~~l-----~~~~g~~l~~~l~~~~~~~~ii~ls~~---~~~~~~~~~~~~ga~ 100 (137)
T 3cfy_A 48 KPQLIILDLKL-----PDMSGEDVLDWINQNDIPTSVIIATAH---GSVDLAVNLIQKGAE 100 (137)
T ss_dssp CCSEEEECSBC-----SSSBHHHHHHHHHHTTCCCEEEEEESS---CCHHHHHHHHHTTCS
T ss_pred CCCEEEEecCC-----CCCCHHHHHHHHHhcCCCCCEEEEEec---CcHHHHHHHHHCCcc
Confidence 45666666522 112356788888875 4678888873 223333334445654
No 370
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=27.67 E-value=1.4e+02 Score=20.43 Aligned_cols=23 Identities=17% Similarity=0.150 Sum_probs=15.6
Q ss_pred cHHHHHHHHHHC----CCcEEEEeCCC
Q 022007 43 GVRQTLDVLRSK----GKKLIFVTNNS 65 (304)
Q Consensus 43 ~a~eal~~L~~~----G~~~~i~Tn~s 65 (304)
+..+.++.+++. ..+++++|+..
T Consensus 61 ~g~~~~~~l~~~~~~~~~~ii~~s~~~ 87 (127)
T 3i42_A 61 SGLALVKQLRALPMEKTSKFVAVSGFA 87 (127)
T ss_dssp BHHHHHHHHHHSCCSSCCEEEEEECC-
T ss_pred CHHHHHHHHHhhhccCCCCEEEEECCc
Confidence 457788888864 46788888743
No 371
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=27.54 E-value=2.5e+02 Score=22.76 Aligned_cols=25 Identities=16% Similarity=0.287 Sum_probs=13.0
Q ss_pred hHHHHHHHHHhCCCCC--CCeEEEEcC
Q 022007 91 SSFAAAMYLKVNNFPQ--ENKVYVIGG 115 (304)
Q Consensus 91 ~~~~~~~~l~~~~~~~--~~~v~~~g~ 115 (304)
.+..+++||.+.+-.. .+++.+++.
T Consensus 118 ~g~~a~~~l~~~g~~~~~~~~i~~i~~ 144 (304)
T 3o1i_D 118 MGYEAGKYLAERHPKGSGKTNIALLLG 144 (304)
T ss_dssp HHHHHHHHHHTTSBTTTCCEEEEEECC
T ss_pred HHHHHHHHHHHhcccCCCCCEEEEEEC
Confidence 3455667777665111 245666643
No 372
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=27.34 E-value=2.5e+02 Score=22.80 Aligned_cols=86 Identities=20% Similarity=0.312 Sum_probs=52.4
Q ss_pred CccHHHHHHHHHHCCCc-EEEEeCCCCcC-----HHHHHHHHHhCCCccCCCCeech-------HHHHHHHHHhCCCCCC
Q 022007 41 IDGVRQTLDVLRSKGKK-LIFVTNNSRRS-----RRQYAHKFHSLGVSVSEDEIFSS-------SFAAAMYLKVNNFPQE 107 (304)
Q Consensus 41 ~~~a~eal~~L~~~G~~-~~i~Tn~s~r~-----~~~~~~~l~~lG~~~~~~~i~~~-------~~~~~~~l~~~~~~~~ 107 (304)
..++..+.+.|.++|++ +.++++..... .+.+.+.+++.|++.....++.. ...+.++|.... .
T Consensus 111 ~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~ 187 (294)
T 3qk7_A 111 HAGASLAVKRLLELGHQRIAFVSTDARISYVDQRLQGYVQTMSEAGLMPLAGYLQKADPTRPGGYLAASRLLALEV---P 187 (294)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEEESSCCHHHHHHHHHHHHHHHTTTCCCCTTCEEEECSSHHHHHHHHHHHHHSSS---C
T ss_pred HHHHHHHHHHHHHCCCceEEEEeCCcccchHHHHHHHHHHHHHHCCCCCChhHeecCCCCHHHHHHHHHHHHcCCC---C
Confidence 34567899999999865 77787643221 23455667788887655444322 234455666432 1
Q ss_pred CeEEEEcCh----hHHHHHHHcCCcc
Q 022007 108 NKVYVIGGE----GILEELRQAGYTG 129 (304)
Q Consensus 108 ~~v~~~g~~----~~~~~l~~~g~~~ 129 (304)
....+...+ +..+.+++.|+.+
T Consensus 188 ~~ai~~~nd~~A~g~~~al~~~G~~v 213 (294)
T 3qk7_A 188 PTAIITDCNMLGDGVASALDKAGLLG 213 (294)
T ss_dssp CSEEEESSHHHHHHHHHHHHHTTCSS
T ss_pred CcEEEECCHHHHHHHHHHHHHcCCCC
Confidence 234555554 4568889999875
No 373
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=27.08 E-value=2.5e+02 Score=22.62 Aligned_cols=84 Identities=15% Similarity=0.271 Sum_probs=50.7
Q ss_pred cHHHHHHHHHHCCCc-EEEEeCCCCcC-----HHHHHHHHHhCCCccCCCCeec-------hHHHHHHHHHhCCCCCCCe
Q 022007 43 GVRQTLDVLRSKGKK-LIFVTNNSRRS-----RRQYAHKFHSLGVSVSEDEIFS-------SSFAAAMYLKVNNFPQENK 109 (304)
Q Consensus 43 ~a~eal~~L~~~G~~-~~i~Tn~s~r~-----~~~~~~~l~~lG~~~~~~~i~~-------~~~~~~~~l~~~~~~~~~~ 109 (304)
++..+.+.|.++|++ +.++++..... ...+.+.+++.|+++....++. ....+.++|.... ...
T Consensus 118 ~g~~a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~ 194 (292)
T 3k4h_A 118 AAREVAEYLISLGHKQIAFIGGGSDLLVTRDRLAGMSDALKLADIVLPKEYILHFDFSRESGQQAVEELMGLQQ---PPT 194 (292)
T ss_dssp HHHHHHHHHHHTTCCCEEEEESCTTBHHHHHHHHHHHHHHHHTTCCCCGGGEEECCSSHHHHHHHHHHHHTSSS---CCS
T ss_pred HHHHHHHHHHHCCCceEEEEeCcccchhHHHHHHHHHHHHHHcCCCCChheEEecCCCHHHHHHHHHHHHcCCC---CCc
Confidence 467888999988865 88888754322 1345566777888765444431 1233445665431 223
Q ss_pred EEEEcCh----hHHHHHHHcCCcc
Q 022007 110 VYVIGGE----GILEELRQAGYTG 129 (304)
Q Consensus 110 v~~~g~~----~~~~~l~~~g~~~ 129 (304)
..+...+ +..+.+++.|+.+
T Consensus 195 ai~~~~d~~a~g~~~al~~~g~~v 218 (292)
T 3k4h_A 195 AIMATDDLIGLGVLSALSKKGFVV 218 (292)
T ss_dssp EEEESSHHHHHHHHHHHHHTTCCT
T ss_pred EEEEcChHHHHHHHHHHHHhCCCC
Confidence 5555555 4678889999875
No 374
>1l1s_A Hypothetical protein MTH1491; structural genomics, PSI, protein STRU initiative; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.114.1.1
Probab=26.83 E-value=1.3e+02 Score=20.87 Aligned_cols=34 Identities=15% Similarity=0.125 Sum_probs=24.0
Q ss_pred EeE-EEEcCCc---cCcc--HHHHHHHHHHCCCcEEEEeC
Q 022007 30 FDC-VIWKGDK---LIDG--VRQTLDVLRSKGKKLIFVTN 63 (304)
Q Consensus 30 fDi-tL~~~~~---~~~~--a~eal~~L~~~G~~~~i~Tn 63 (304)
.|+ ++..|.. ...+ ..+.|+.|.++|+++.+|.|
T Consensus 35 ~~i~vv~~G~av~~~~~~~~~~~~i~~L~~~gV~~~~C~~ 74 (113)
T 1l1s_A 35 VRIEVVAYSMGVNVLRRDSEYSGDVSELTGQGVRFCACSN 74 (113)
T ss_dssp EEEEEEECGGGGGGGBTTCTTHHHHHHHHHTTCEEEEEHH
T ss_pred CcEEEEEechHHHHHHcCChHHHHHHHHHHCCCEEEecHH
Confidence 666 5555442 1222 46899999999999999988
No 375
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=26.74 E-value=1.5e+02 Score=21.23 Aligned_cols=46 Identities=15% Similarity=0.242 Sum_probs=31.3
Q ss_pred CCccCccHHHHHHHHHHCCCcEEEEeCCCCc-C-HHHHHHHHHhCCCc
Q 022007 37 GDKLIDGVRQTLDVLRSKGKKLIFVTNNSRR-S-RRQYAHKFHSLGVS 82 (304)
Q Consensus 37 ~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r-~-~~~~~~~l~~lG~~ 82 (304)
...+.-|..+.++.++.....++|++++.+. . ...+....+..|++
T Consensus 18 ~gkl~~G~~~v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP 65 (121)
T 2lbw_A 18 AKNVKRGVKEVVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVP 65 (121)
T ss_dssp TTCEEESHHHHHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCC
T ss_pred cCCccccHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCc
Confidence 4456779999999999887777777765544 3 34444555556665
No 376
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=26.69 E-value=34 Score=24.30 Aligned_cols=51 Identities=12% Similarity=-0.018 Sum_probs=28.7
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++++++|+.+-+ .+..+.++.+++. ..+++++|+. ..........+.|.+
T Consensus 59 ~~dlvi~D~~l~~-----~~g~~~~~~l~~~~~~~~ii~~s~~---~~~~~~~~~~~~g~~ 111 (135)
T 3snk_A 59 RPGIVILDLGGGD-----LLGKPGIVEARALWATVPLIAVSDE---LTSEQTRVLVRMNAS 111 (135)
T ss_dssp CCSEEEEEEETTG-----GGGSTTHHHHHGGGTTCCEEEEESC---CCHHHHHHHHHTTCS
T ss_pred CCCEEEEeCCCCC-----chHHHHHHHHHhhCCCCcEEEEeCC---CCHHHHHHHHHcCcH
Confidence 4566666662211 1234666777765 4889999983 333344444456654
No 377
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=26.62 E-value=38 Score=25.12 Aligned_cols=20 Identities=15% Similarity=0.219 Sum_probs=14.9
Q ss_pred cchhhHHHhhhc-cCEEEEeE
Q 022007 13 LSANNITALFDS-VDAFLFDC 32 (304)
Q Consensus 13 ~~~~~~~~~~~~-~k~i~fDi 32 (304)
.+.+.+.+++.+ -+.+++|+
T Consensus 7 is~~el~~~l~~~~~~~liDV 27 (148)
T 2fsx_A 7 ITPLQAWEMLSDNPRAVLVDV 27 (148)
T ss_dssp ECHHHHHHHHHHCTTCEEEEC
T ss_pred CCHHHHHHHHhcCCCeEEEEC
Confidence 456677777774 57889999
No 378
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=26.58 E-value=90 Score=22.35 Aligned_cols=49 Identities=8% Similarity=0.049 Sum_probs=35.7
Q ss_pred EEEcCCccCccHHHHHHHHHHCCCcEEEE-eCCCCcCHHHHHHHHHhCCCc
Q 022007 33 VIWKGDKLIDGVRQTLDVLRSKGKKLIFV-TNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 33 tL~~~~~~~~~a~eal~~L~~~G~~~~i~-Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
|+|..... +..++|.+.|+++|+.+-+. --..+.+.+++.+.+..+|.+
T Consensus 6 ~iY~~~~C-~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~ 55 (120)
T 3fz4_A 6 TFYEYPKC-STCRRAKAELDDLAWDYDAIDIKKNPPAASLIRNWLENSGLE 55 (120)
T ss_dssp EEEECSSC-HHHHHHHHHHHHHTCCEEEEETTTSCCCHHHHHHHHHHSCCC
T ss_pred EEEeCCCC-hHHHHHHHHHHHcCCceEEEEeccCchhHHHHHHHHHHcCCC
Confidence 55543332 24789999999999998544 333557899999999999875
No 379
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=26.51 E-value=1.2e+02 Score=21.00 Aligned_cols=51 Identities=22% Similarity=0.263 Sum_probs=27.6
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHC---CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK---GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~---G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++.+++|+.+ +-.+..+.++.+++. ..+++++|+. ..........+.|.+
T Consensus 48 ~~dlvllD~~l-----~~~~g~~~~~~l~~~~~~~~~ii~ls~~---~~~~~~~~~~~~ga~ 101 (130)
T 1dz3_A 48 RPDILLLDIIM-----PHLDGLAVLERIRAGFEHQPNVIMLTAF---GQEDVTKKAVELGAS 101 (130)
T ss_dssp CCSEEEEESCC-----SSSCHHHHHHHHHHHCSSCCEEEEEEET---TCHHHHHHHHHTTCE
T ss_pred CCCEEEEecCC-----CCCCHHHHHHHHHhcCCCCCcEEEEecC---CCHHHHHHHHHcCCC
Confidence 45666666522 112356788888763 4568888873 223333344445654
No 380
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=26.45 E-value=2.8e+02 Score=23.07 Aligned_cols=45 Identities=13% Similarity=0.399 Sum_probs=35.1
Q ss_pred CcHHHHHHHHHHcCCCCCcEEEEc---CCchhhHHHHHHcCCeEEEEccCCCC
Q 022007 226 PSTFMMEILSKKFQIASSRMCMVG---DRLDTDILFGQNAGCKTLLVLSGVTT 275 (304)
Q Consensus 226 P~~~~~~~al~~lg~~~~~~~~IG---D~~~~Di~~a~~aG~~ti~V~~G~~~ 275 (304)
-+++.++.+.+..+++ ++++ .+ ..|+..|-+.|++.++|.++...
T Consensus 174 ~~~~lI~~I~e~~~vP----VI~eGGI~T-PsDAa~AmeLGAdgVlVgSAI~~ 221 (265)
T 1wv2_A 174 CNPYNLRIILEEAKVP----VLVDAGVGT-ASDAAIAMELGCEAVLMNTAIAH 221 (265)
T ss_dssp SCHHHHHHHHHHCSSC----BEEESCCCS-HHHHHHHHHHTCSEEEESHHHHT
T ss_pred CCHHHHHHHHhcCCCC----EEEeCCCCC-HHHHHHHHHcCCCEEEEChHHhC
Confidence 4688999988865553 3444 34 68999999999999999998764
No 381
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=26.32 E-value=71 Score=22.61 Aligned_cols=36 Identities=8% Similarity=0.110 Sum_probs=21.8
Q ss_pred HHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 44 VRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 44 a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
..+.++.+++. ..+++++|+.. .........+.|.+
T Consensus 62 g~~~~~~l~~~~~~~pii~ls~~~---~~~~~~~~~~~g~~ 99 (142)
T 2qxy_A 62 SLNLIRRIREEFPDTKVAVLSAYV---DKDLIINSVKAGAV 99 (142)
T ss_dssp HHHHHHHHHHHCTTCEEEEEESCC---CHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHCCCCCEEEEECCC---CHHHHHHHHHCCcc
Confidence 46778888764 57888898842 23333344445544
No 382
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=26.28 E-value=63 Score=28.06 Aligned_cols=28 Identities=11% Similarity=0.175 Sum_probs=23.2
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCC
Q 022007 38 DKLIDGVRQTLDVLRSKGKKLIFVTNNS 65 (304)
Q Consensus 38 ~~~~~~a~eal~~L~~~G~~~~i~Tn~s 65 (304)
..--+...++++.++++|.+++.+||+.
T Consensus 112 SG~t~e~~~a~~~ak~~Ga~vi~IT~~~ 139 (355)
T 2a3n_A 112 SGDTKESVAIAEWCKAQGIRVVAITKNA 139 (355)
T ss_dssp SSCCHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CCCCHHHHHHHHHHHHCCCeEEEEECCC
Confidence 3445668899999999999999999964
No 383
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=26.11 E-value=97 Score=22.24 Aligned_cols=34 Identities=9% Similarity=0.058 Sum_probs=20.3
Q ss_pred cCEEEEeEEEEcCCccCccHHHHHHHHHHC--CCcEEEEeC
Q 022007 25 VDAFLFDCVIWKGDKLIDGVRQTLDVLRSK--GKKLIFVTN 63 (304)
Q Consensus 25 ~k~i~fDitL~~~~~~~~~a~eal~~L~~~--G~~~~i~Tn 63 (304)
++++++|+.+ +-....+.++.+++. ..+++++|+
T Consensus 49 ~dlvi~D~~l-----~~~~g~~~~~~l~~~~~~~~ii~~s~ 84 (151)
T 3kcn_A 49 FSVIMVDMRM-----PGMEGTEVIQKARLISPNSVYLMLTG 84 (151)
T ss_dssp CSEEEEESCC-----SSSCHHHHHHHHHHHCSSCEEEEEEC
T ss_pred CCEEEEeCCC-----CCCcHHHHHHHHHhcCCCcEEEEEEC
Confidence 4666666522 112356777777753 567788887
No 384
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=25.71 E-value=61 Score=23.90 Aligned_cols=69 Identities=13% Similarity=0.136 Sum_probs=34.9
Q ss_pred ccchhhHHHhhhcc--CEEEEeE-EE--EcCCccCccHH-----HHHHHH---HHCCCcEEEEeCCCCcCHHHHHHHHHh
Q 022007 12 LLSANNITALFDSV--DAFLFDC-VI--WKGDKLIDGVR-----QTLDVL---RSKGKKLIFVTNNSRRSRRQYAHKFHS 78 (304)
Q Consensus 12 ~~~~~~~~~~~~~~--k~i~fDi-tL--~~~~~~~~~a~-----eal~~L---~~~G~~~~i~Tn~s~r~~~~~~~~l~~ 78 (304)
|.+.+.+.+++.+- +.+++|+ .- |.. .-+|||. +....+ ..++.++++..+ ++.........|+.
T Consensus 1 mIs~~el~~~l~~~~~~~~liDvR~~~e~~~-ghIpgAi~ip~~~l~~~~~~~l~~~~~ivvyC~-~g~rs~~aa~~L~~ 78 (141)
T 3ilm_A 1 MSDAHVLKSRLEWGEPAFTILDVRDRSTYND-GHIMGAMAMPIEDLVDRASSSLEKSRDIYVYGA-GDEQTSQAVNLLRS 78 (141)
T ss_dssp -CCHHHHHHHHHHSCSCEEEEECSCHHHHHH-CEETTCEECCGGGHHHHHHTTSCTTSEEEEECS-SHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhcCCCCEEEEECCCHHHHhC-CCCCCCEEcCHHHHHHHHHhcCCCCCeEEEEEC-CChHHHHHHHHHHH
Confidence 34566777887743 4899999 32 211 1222221 111122 124456666655 33334455566777
Q ss_pred CCCc
Q 022007 79 LGVS 82 (304)
Q Consensus 79 lG~~ 82 (304)
+|++
T Consensus 79 ~G~~ 82 (141)
T 3ilm_A 79 AGFE 82 (141)
T ss_dssp TTCC
T ss_pred cCCC
Confidence 7774
No 385
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=25.66 E-value=69 Score=27.06 Aligned_cols=31 Identities=6% Similarity=-0.067 Sum_probs=24.9
Q ss_pred EcCCccCccHHHHHHHHHHCCCcEEEEeCCC
Q 022007 35 WKGDKLIDGVRQTLDVLRSKGKKLIFVTNNS 65 (304)
Q Consensus 35 ~~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s 65 (304)
.....--+...++++.++++|.+++.+||+.
T Consensus 86 iS~SG~T~e~~~a~~~ak~~g~~~iaIT~~~ 116 (302)
T 1tzb_A 86 VSYSGNTIETLYTVEYAKRRRIPAVAITTGG 116 (302)
T ss_dssp ECSSSCCHHHHHHHHHHHHTTCCEEEEESST
T ss_pred EeCCCCCHHHHHHHHHHHHCCCeEEEECCCc
Confidence 3444556678899999999999999999954
No 386
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=25.54 E-value=74 Score=21.98 Aligned_cols=20 Identities=20% Similarity=0.247 Sum_probs=13.7
Q ss_pred HHHHHHHHHHC----CCcEEEEeC
Q 022007 44 VRQTLDVLRSK----GKKLIFVTN 63 (304)
Q Consensus 44 a~eal~~L~~~----G~~~~i~Tn 63 (304)
..+.++.+++. ..+++++|+
T Consensus 66 g~~~~~~l~~~~~~~~~~ii~~s~ 89 (129)
T 1p6q_A 66 GLGLLQAVRANPATKKAAFIILTA 89 (129)
T ss_dssp HHHHHHHHTTCTTSTTCEEEECCS
T ss_pred HHHHHHHHhcCccccCCCEEEEeC
Confidence 46777777763 456777776
No 387
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=25.49 E-value=67 Score=20.96 Aligned_cols=36 Identities=14% Similarity=0.201 Sum_probs=19.2
Q ss_pred HHHHHHH-HCCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 46 QTLDVLR-SKGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 46 eal~~L~-~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
+.+..+. .++.++++..+ ++.........|+++|++
T Consensus 31 ~~~~~l~~~~~~~ivv~C~-~g~rs~~aa~~L~~~G~~ 67 (85)
T 2jtq_A 31 ERIATAVPDKNDTVKVYCN-AGRQSGQAKEILSEMGYT 67 (85)
T ss_dssp HHHHHHCCCTTSEEEEEES-SSHHHHHHHHHHHHTTCS
T ss_pred HHHHHhCCCCCCcEEEEcC-CCchHHHHHHHHHHcCCC
Confidence 3444441 34566666665 333344555667777764
No 388
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=25.47 E-value=1.7e+02 Score=20.33 Aligned_cols=22 Identities=14% Similarity=0.308 Sum_probs=14.8
Q ss_pred cHHHHHHHHHH----CCCcEEEEeCC
Q 022007 43 GVRQTLDVLRS----KGKKLIFVTNN 64 (304)
Q Consensus 43 ~a~eal~~L~~----~G~~~~i~Tn~ 64 (304)
...+.++.+++ ...+++++|+.
T Consensus 65 ~g~~~~~~l~~~~~~~~~pii~~s~~ 90 (142)
T 3cg4_A 65 DGWDTIRAILDNSLEQGIAIVMLTAK 90 (142)
T ss_dssp CHHHHHHHHHHTTCCTTEEEEEEECT
T ss_pred CHHHHHHHHHhhcccCCCCEEEEECC
Confidence 35677788876 24567777773
No 389
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=25.44 E-value=57 Score=22.51 Aligned_cols=28 Identities=14% Similarity=0.214 Sum_probs=15.8
Q ss_pred CCCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 54 KGKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 54 ~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
++.++++..+.. .........|+.+|++
T Consensus 51 ~~~~ivvyc~~g-~rs~~a~~~L~~~G~~ 78 (106)
T 3hix_A 51 KSRDIYVYGAGD-EQTSQAVNLLRSAGFE 78 (106)
T ss_dssp TTSCEEEECSSH-HHHHHHHHHHHHTTCS
T ss_pred CCCeEEEEECCC-ChHHHHHHHHHHcCCc
Confidence 456666665533 3344555667777774
No 390
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=25.32 E-value=79 Score=27.46 Aligned_cols=31 Identities=10% Similarity=0.055 Sum_probs=24.5
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCcC
Q 022007 38 DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRS 68 (304)
Q Consensus 38 ~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~ 68 (304)
..--+.+.++++.++++|.+++.+||+..-+
T Consensus 92 SG~T~e~l~a~~~ak~~ga~~iaIT~~~~S~ 122 (352)
T 3g68_A 92 GGSSYSTYNAMKLAEDKGCKIASMAGCKNAL 122 (352)
T ss_dssp SSCCHHHHHHHHHHHHTTCEEEEEESSTTCG
T ss_pred CCCCHHHHHHHHHHHHCCCCEEEEeCCCCCh
Confidence 3445668899999999999999999954433
No 391
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=25.12 E-value=99 Score=21.79 Aligned_cols=36 Identities=8% Similarity=0.116 Sum_probs=22.8
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHC-CCcEEEEeCC
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK-GKKLIFVTNN 64 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~-G~~~~i~Tn~ 64 (304)
.++.+++|+.+- -....+.++.|++. ..+++++|+.
T Consensus 48 ~~dlvllD~~l~-----~~~g~~l~~~l~~~~~~~ii~ls~~ 84 (136)
T 2qzj_A 48 KYDLIFLEIILS-----DGDGWTLCKKIRNVTTCPIVYMTYI 84 (136)
T ss_dssp CCSEEEEESEET-----TEEHHHHHHHHHTTCCCCEEEEESC
T ss_pred CCCEEEEeCCCC-----CCCHHHHHHHHccCCCCCEEEEEcC
Confidence 466777766331 11246788888765 5778888873
No 392
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=24.90 E-value=2.2e+02 Score=23.15 Aligned_cols=84 Identities=17% Similarity=0.196 Sum_probs=50.4
Q ss_pred cHHHHHHHHHHCCCc-EEEEeCCCCcC-----HHHHHHHHHhCCCccCCCCeech----------H--HHHHHHHHhCCC
Q 022007 43 GVRQTLDVLRSKGKK-LIFVTNNSRRS-----RRQYAHKFHSLGVSVSEDEIFSS----------S--FAAAMYLKVNNF 104 (304)
Q Consensus 43 ~a~eal~~L~~~G~~-~~i~Tn~s~r~-----~~~~~~~l~~lG~~~~~~~i~~~----------~--~~~~~~l~~~~~ 104 (304)
++..+.+.|.++|++ +.++++....+ .+.+.+.+++.|++.....++.. . ..+.++|....
T Consensus 118 ~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 196 (301)
T 3miz_A 118 GARDLTRYLLERGHRRIGYIRLNPILLGAELRLDAFRRTTSEFGLTENDLSISLGMDGPVGAENNYVFAAATEMLKQDD- 196 (301)
T ss_dssp HHHHHHHHHHTTTCCSEEEEECCTTSHHHHHHHHHHHHHHHHHTCCGGGEEEEECEESSTTSCEECHHHHHHHHHTSTT-
T ss_pred HHHHHHHHHHHcCCCeEEEEecCccchhHHHHHHHHHHHHHHcCCCCCcceEEEcCCCCcCccccHHHHHHHHHHcCCC-
Confidence 467899999998865 78888744332 13445567777876543322221 2 55666775432
Q ss_pred CCCCeEEEEcCh----hHHHHHHHcCCcc
Q 022007 105 PQENKVYVIGGE----GILEELRQAGYTG 129 (304)
Q Consensus 105 ~~~~~v~~~g~~----~~~~~l~~~g~~~ 129 (304)
.....+...+ +..+.+++.|+.+
T Consensus 197 --~~~ai~~~~d~~A~g~~~al~~~g~~v 223 (301)
T 3miz_A 197 --RPTAIMSGNDEMAIQIYIAAMALGLRI 223 (301)
T ss_dssp --CCSEEEESSHHHHHHHHHHHHTTTCCH
T ss_pred --CCcEEEECCHHHHHHHHHHHHHcCCCC
Confidence 1234555555 3567888889865
No 393
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=24.74 E-value=80 Score=27.64 Aligned_cols=35 Identities=6% Similarity=-0.076 Sum_probs=26.6
Q ss_pred cCCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHH
Q 022007 36 KGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRR 70 (304)
Q Consensus 36 ~~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~ 70 (304)
....--+.+.++++.++++|.+++.+||+..-+..
T Consensus 105 S~SGeT~e~l~a~~~ak~~Ga~~IaIT~~~~S~La 139 (366)
T 3knz_A 105 SQGGGSLSTLAAMERARNVGHITASMAGVAPATID 139 (366)
T ss_dssp ESSSCCHHHHHHHHHHHHTTCEEEEEESSSSCGGG
T ss_pred cCCCCCHHHHHHHHHHHHcCCCEEEEECCCCChhh
Confidence 33445667889999999999999999996544433
No 394
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=24.68 E-value=1.2e+02 Score=22.92 Aligned_cols=51 Identities=10% Similarity=0.010 Sum_probs=29.4
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++++++|+.+- -.+..+.++.+++. ..+++++|+ ..........-+.|.+
T Consensus 51 ~~dlvl~D~~lp-----~~~g~~~~~~l~~~~~~~~ii~lt~---~~~~~~~~~a~~~Ga~ 103 (184)
T 3rqi_A 51 KFEFITVXLHLG-----NDSGLSLIAPLCDLQPDARILVLTG---YASIATAVQAVKDGAD 103 (184)
T ss_dssp CCSEEEECSEET-----TEESHHHHHHHHHHCTTCEEEEEES---SCCHHHHHHHHHHTCS
T ss_pred CCCEEEEeccCC-----CccHHHHHHHHHhcCCCCCEEEEeC---CCCHHHHHHHHHhCHH
Confidence 356666666321 12346777777763 578999998 3333444444455654
No 395
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=24.66 E-value=1.4e+02 Score=24.89 Aligned_cols=27 Identities=15% Similarity=0.233 Sum_probs=23.1
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCC
Q 022007 40 LIDGVRQTLDVLRSKGKKLIFVTNNSR 66 (304)
Q Consensus 40 ~~~~a~eal~~L~~~G~~~~i~Tn~s~ 66 (304)
..|...+.++.+++.|+.+.+.||++.
T Consensus 141 l~~~l~~li~~~~~~g~~~~l~TNG~~ 167 (311)
T 2z2u_A 141 LYPYLDELIKIFHKNGFTTFVVSNGIL 167 (311)
T ss_dssp GSTTHHHHHHHHHHTTCEEEEEECSCC
T ss_pred chhhHHHHHHHHHHCCCcEEEECCCCC
Confidence 356788999999999999999999654
No 396
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=24.62 E-value=1.6e+02 Score=19.90 Aligned_cols=21 Identities=24% Similarity=0.216 Sum_probs=14.7
Q ss_pred HHHHHHHHHH-CCCcEEEEeCC
Q 022007 44 VRQTLDVLRS-KGKKLIFVTNN 64 (304)
Q Consensus 44 a~eal~~L~~-~G~~~~i~Tn~ 64 (304)
..+.++.+++ ...+++++|+.
T Consensus 62 g~~~~~~l~~~~~~~ii~~s~~ 83 (123)
T 1xhf_A 62 GLLLARELREQANVALMFLTGR 83 (123)
T ss_dssp HHHHHHHHHHHCCCEEEEEESC
T ss_pred HHHHHHHHHhCCCCcEEEEECC
Confidence 4677777765 46778888873
No 397
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=24.47 E-value=1.5e+02 Score=22.83 Aligned_cols=51 Identities=20% Similarity=0.197 Sum_probs=29.6
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++.+++|+ .-+-.+..+.++.+++. ..+++++|.. .........-+.|.+
T Consensus 51 ~~dlvllD~-----~lp~~~g~~~~~~lr~~~~~~~ii~ls~~---~~~~~~~~~~~~Ga~ 103 (215)
T 1a04_A 51 DPDLILLDL-----NMPGMNGLETLDKLREKSLSGRIVVFSVS---NHEEDVVTALKRGAD 103 (215)
T ss_dssp CCSEEEEET-----TSTTSCHHHHHHHHHHSCCCSEEEEEECC---CCHHHHHHHHHTTCS
T ss_pred CCCEEEEeC-----CCCCCcHHHHHHHHHHhCCCCcEEEEECC---CCHHHHHHHHHcCCc
Confidence 355555554 22222457888898876 4688899983 333333444456664
No 398
>1j0g_A Hypothetical protein 1810045K17; ubiquitin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.15.1.6 PDB: 1wxs_A 1l7y_A
Probab=24.29 E-value=13 Score=24.91 Aligned_cols=40 Identities=18% Similarity=0.346 Sum_probs=31.2
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcC
Q 022007 223 VGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAG 263 (304)
Q Consensus 223 ~gKP~~~~~~~al~~lg~~~~~~~~IGD~~~~Di~~a~~aG 263 (304)
..-|....++.+++.++++++.+..|-++ ...|...+.+|
T Consensus 32 E~~PftAVlkfaaEeF~vp~~TsAiiT~d-GiGInP~QtAG 71 (92)
T 1j0g_A 32 ESTPFTAVLKFAAEEFKVPAATSAIITND-GIGINPAQTAG 71 (92)
T ss_dssp TTSBHHHHHHHHHHHTTCCSSSEEEECTT-SCCCCCSSBHH
T ss_pred ccCchHHHHHHHHHHcCCCccceEEEecC-CcccChhhccc
Confidence 34577889999999999999999998887 66665555544
No 399
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=23.87 E-value=80 Score=27.30 Aligned_cols=34 Identities=9% Similarity=0.004 Sum_probs=25.9
Q ss_pred CCccCccHHHHHHHHHHCCCcEEEEeCCCCcCHH
Q 022007 37 GDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRR 70 (304)
Q Consensus 37 ~~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~ 70 (304)
...--+...++++.++++|.+++.+||+..-+..
T Consensus 100 ~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La 133 (344)
T 3fj1_A 100 QSGKSPDIVAMTRNAGRDGALCVALTNDAASPLA 133 (344)
T ss_dssp SSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHH
T ss_pred CCCCCHHHHHHHHHHHHCCCcEEEEECCCCChHH
Confidence 3345667889999999999999999995443333
No 400
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=23.86 E-value=97 Score=22.70 Aligned_cols=41 Identities=10% Similarity=0.213 Sum_probs=27.3
Q ss_pred cHHHHHHHHHHCCCcEEEEeCCCCcC---HHHHHHHHHhCCCcc
Q 022007 43 GVRQTLDVLRSKGKKLIFVTNNSRRS---RRQYAHKFHSLGVSV 83 (304)
Q Consensus 43 ~a~eal~~L~~~G~~~~i~Tn~s~r~---~~~~~~~l~~lG~~~ 83 (304)
.-.++|....++|++|.++++..... .....+.|.+.|+++
T Consensus 41 ~i~~aL~~a~~rGV~Vril~~~~~~~~~~~~~~~~~L~~~gv~v 84 (155)
T 1byr_A 41 DIMKALVAAKKRGVDVKIVIDERGNTGRASIAAMNYIANSGIPL 84 (155)
T ss_dssp HHHHHHHHHHHTTCEEEEEEESTTCCSHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHCCCEEEEEEeCccccccccHHHHHHHHHCCCeE
Confidence 34678888888999999998755432 234445566667654
No 401
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=23.46 E-value=2e+02 Score=22.39 Aligned_cols=59 Identities=14% Similarity=0.120 Sum_probs=39.0
Q ss_pred hhccCEEEEeE-EEEcCCccCccHHHHHHHHHHC------CCcEEE-EeCCCCcC------HHHHHHHHHhCCCc
Q 022007 22 FDSVDAFLFDC-VIWKGDKLIDGVRQTLDVLRSK------GKKLIF-VTNNSRRS------RRQYAHKFHSLGVS 82 (304)
Q Consensus 22 ~~~~k~i~fDi-tL~~~~~~~~~a~eal~~L~~~------G~~~~i-~Tn~s~r~------~~~~~~~l~~lG~~ 82 (304)
+.+++.++|=. |- ...+.+.+.++++.|+.. |+++.+ -+++++.. ...+.+.|+++|+.
T Consensus 65 l~~~d~vi~g~~Ty--~G~~p~~~~~fl~~L~~~~~~~l~~~~~avfG~Gds~y~~~f~~a~~~l~~~L~~~Ga~ 137 (191)
T 1bvy_F 65 LPREGAVLIVTASY--NGHPPDNAKQFVDWLDQASADEVKGVRYSVFGCGDKNWATTYQKVPAFIDETLAAKGAE 137 (191)
T ss_dssp CCSSSEEEEEECCB--TTBCCTTTHHHHHHHHTCCSSCCTTCCEEEEEEECTTSGGGTTHHHHHHHHHHHTTTCC
T ss_pred hhhCCeEEEEEeec--CCCcCHHHHHHHHHHHhccchhhCCCEEEEEEccCCchhhhHhHHHHHHHHHHHHCCCe
Confidence 44577887766 63 345777789999998753 466654 34555552 35677778888876
No 402
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=23.36 E-value=1.3e+02 Score=22.53 Aligned_cols=40 Identities=10% Similarity=0.134 Sum_probs=25.6
Q ss_pred hhccCEEEEeEEEEcCCccCccHHHHHHHHHHCCCcEEEEe
Q 022007 22 FDSVDAFLFDCVIWKGDKLIDGVRQTLDVLRSKGKKLIFVT 62 (304)
Q Consensus 22 ~~~~k~i~fDitL~~~~~~~~~a~eal~~L~~~G~~~~i~T 62 (304)
+.+++.|+|=.=.|. .++.+-..++|+.+.-+|+++++++
T Consensus 76 l~~yd~iilG~P~~~-g~~~~~~~~fl~~~~l~gk~v~~f~ 115 (162)
T 3klb_A 76 PEKYEVLFVGFPVWW-YIAPTIINTFLESYDFAGKIVVPFA 115 (162)
T ss_dssp GGGCSEEEEEEECBT-TBCCHHHHHHHHTSCCTTCEEEEEE
T ss_pred hhhCCEEEEEccccc-CCCCHHHHHHHHhcCCCCCEEEEEE
Confidence 567888888663343 3444556788887655677765554
No 403
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=23.14 E-value=86 Score=27.03 Aligned_cols=33 Identities=6% Similarity=0.080 Sum_probs=25.6
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCcCHH
Q 022007 38 DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRR 70 (304)
Q Consensus 38 ~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~ 70 (304)
..--+...++++.++++|.+++.+||+..-+..
T Consensus 100 SG~T~e~~~a~~~ak~~g~~~i~IT~~~~S~la 132 (334)
T 3hba_A 100 SGRSPDILAQARMAKNAGAFCVALVNDETAPIK 132 (334)
T ss_dssp SSCCHHHHHHHHHHHHTTCEEEEEESCTTSGGG
T ss_pred CCCCHHHHHHHHHHHHcCCcEEEEeCCCCChHH
Confidence 345667889999999999999999996544433
No 404
>3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans}
Probab=23.13 E-value=1.2e+02 Score=25.57 Aligned_cols=40 Identities=15% Similarity=0.172 Sum_probs=32.4
Q ss_pred CccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccC
Q 022007 41 IDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVS 84 (304)
Q Consensus 41 ~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~ 84 (304)
++...+-|..|++.|++++++++. ..++.+.++++|++-.
T Consensus 52 ~~~l~~dIa~L~~~G~~vVlVhgG----g~~i~~~l~~lg~~~~ 91 (279)
T 3l86_A 52 SGDFLSQIKNWQDAGKQLVIVHGG----GFAINKLMEENQVPVK 91 (279)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECC----HHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHhCCCcEEEEECC----HHHHHHHHHHcCCCCc
Confidence 455678899999999999999983 5677888999998743
No 405
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=23.06 E-value=68 Score=27.84 Aligned_cols=31 Identities=16% Similarity=0.078 Sum_probs=24.5
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCcC
Q 022007 38 DKLIDGVRQTLDVLRSKGKKLIFVTNNSRRS 68 (304)
Q Consensus 38 ~~~~~~a~eal~~L~~~G~~~~i~Tn~s~r~ 68 (304)
..--+.+.++++.++++|.+++.+||+..-+
T Consensus 99 SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~ 129 (347)
T 3fkj_A 99 QGNTAETVAAARVAREKGAATIGLVYQPDTP 129 (347)
T ss_dssp SSCCHHHHHHHHHHHHHTCEEEEEESSTTCH
T ss_pred CCCcHHHHHHHHHHHHCCCcEEEEeCCCCCh
Confidence 3445668899999999999999999954333
No 406
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=22.64 E-value=3.3e+02 Score=22.62 Aligned_cols=103 Identities=15% Similarity=0.162 Sum_probs=56.5
Q ss_pred ccCEEEEeE-EEEcC-C-c----cCccHHHHHHHHHHCCCc-EEEEeCCCCcC-----HHHHHHHHHhCCCccCCCCee-
Q 022007 24 SVDAFLFDC-VIWKG-D-K----LIDGVRQTLDVLRSKGKK-LIFVTNNSRRS-----RRQYAHKFHSLGVSVSEDEIF- 89 (304)
Q Consensus 24 ~~k~i~fDi-tL~~~-~-~----~~~~a~eal~~L~~~G~~-~~i~Tn~s~r~-----~~~~~~~l~~lG~~~~~~~i~- 89 (304)
.+..|++|- .--.. . . -..++..+.+.|.++|++ +.++++..... ...+.+.+++.|+++....++
T Consensus 138 ~iPvV~~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~g~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~ 217 (340)
T 1qpz_A 138 HIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQ 217 (340)
T ss_dssp TSCEEEEEESSCCCSSSEEEECCHHHHHHHHHHHHHHHTCCCEEEECCCTTSHHHHHHHHHHHHHHHHTTCCCCGGGBCC
T ss_pred CCCEEEEecccCCCCCCCEEEECHHHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHHHHHHHHHHCCCCCChhheEe
Confidence 577888876 21111 1 1 133467888899888865 77787643221 124556677788765432222
Q ss_pred ---ch---HHHHHHHHHhCCCCCCCeEEEEcCh----hHHHHHHHcCCcc
Q 022007 90 ---SS---SFAAAMYLKVNNFPQENKVYVIGGE----GILEELRQAGYTG 129 (304)
Q Consensus 90 ---~~---~~~~~~~l~~~~~~~~~~v~~~g~~----~~~~~l~~~g~~~ 129 (304)
+. ...+..+|.... .....+...+ +..+.+++.|+.+
T Consensus 218 ~~~~~~~~~~~~~~ll~~~~---~~~ai~~~nd~~A~g~~~al~~~G~~v 264 (340)
T 1qpz_A 218 GDFEPESGYRAMQQILSQPH---RPTAVFCGGDIMAMGALCAADEMGLRV 264 (340)
T ss_dssp CCSSHHHHHHHHHHHHTSSS---CCSEEEESSHHHHHHHHHHHHHTTCCT
T ss_pred CCCCHHHHHHHHHHHHcCCC---CCcEEEECCHHHHHHHHHHHHHcCCCC
Confidence 11 123344555321 1234555555 3567888999865
No 407
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=22.58 E-value=1.7e+02 Score=20.06 Aligned_cols=64 Identities=16% Similarity=0.359 Sum_probs=37.1
Q ss_pred hhHHHhhhccCEEEEeEEEEcCCccCccHHHHHHHHHHCCCcEEEEe-CCCCcCHHHHHHHHHhCCCcc
Q 022007 16 NNITALFDSVDAFLFDCVIWKGDKLIDGVRQTLDVLRSKGKKLIFVT-NNSRRSRRQYAHKFHSLGVSV 83 (304)
Q Consensus 16 ~~~~~~~~~~k~i~fDitL~~~~~~~~~a~eal~~L~~~G~~~~i~T-n~s~r~~~~~~~~l~~lG~~~ 83 (304)
.++.++..+|.+-+. +..-.+..+ |..|++..+..|-++.++- .+..-..+++....++-||.+
T Consensus 40 dsieelvkkynativ--vvvvddkew--aekairfvkslgaqvliiiydqdqnrleefsrevrrrgfev 104 (134)
T 2l69_A 40 DSIEELVKKYNATIV--VVVVDDKEW--AEKAIRFVKSLGAQVLIIIYDQDQNRLEEFSREVRRRGFEV 104 (134)
T ss_dssp HHHHHHTTCCCCEEE--EEECSSHHH--HHHHHHHHHHHCCCCEEEEECSCHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHhCCeEE--EEEEccHHH--HHHHHHHHHhcCCeEEEEEEeCchhHHHHHHHHHHhcCceE
Confidence 355667777776433 333233322 6777888888787765544 322223456666677778874
No 408
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=21.93 E-value=1.7e+02 Score=19.71 Aligned_cols=36 Identities=28% Similarity=0.266 Sum_probs=21.3
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHH-CCCcEEEEeCC
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRS-KGKKLIFVTNN 64 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~-~G~~~~i~Tn~ 64 (304)
.++.+++|+.+ +-.+..+.++.+++ ...+++++|+.
T Consensus 46 ~~dlvi~d~~l-----~~~~g~~~~~~l~~~~~~~ii~~s~~ 82 (122)
T 1zgz_A 46 SVDLILLDINL-----PDENGLMLTRALRERSTVGIILVTGR 82 (122)
T ss_dssp CCSEEEEESCC-----SSSCHHHHHHHHHTTCCCEEEEEESS
T ss_pred CCCEEEEeCCC-----CCCChHHHHHHHHhcCCCCEEEEECC
Confidence 35666665522 11234677777775 35678888873
No 409
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=21.92 E-value=93 Score=26.48 Aligned_cols=74 Identities=14% Similarity=0.199 Sum_probs=0.0
Q ss_pred CccccchhhHHHhhhccCEEEEeE--EEE-cCCccCccH--------------------HHHHHHHHH----CCCcEEEE
Q 022007 9 PAELLSANNITALFDSVDAFLFDC--VIW-KGDKLIDGV--------------------RQTLDVLRS----KGKKLIFV 61 (304)
Q Consensus 9 ~~~~~~~~~~~~~~~~~k~i~fDi--tL~-~~~~~~~~a--------------------~eal~~L~~----~G~~~~i~ 61 (304)
+..+.+.+.+.+.+++-+.+++|+ --- -...-|||| .++-+.+.+ ++.+|++.
T Consensus 38 ~~~~is~~~l~~~l~~~~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi~~~~~vVvy 117 (318)
T 3hzu_A 38 PERLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVIY 117 (318)
T ss_dssp GGGEECHHHHHHHTTCTTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CCceecHHHHHHhccCCCEEEEECCCChhHHhcCcCCCCeEeCchhhhccCcccCCCCHHHHHHHHHHcCCCCCCeEEEE
Q ss_pred eCCCCcCHHHHHHHHHhCCCc
Q 022007 62 TNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 62 Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.+............|+.+|++
T Consensus 118 c~~g~~~a~~a~~~L~~~G~~ 138 (318)
T 3hzu_A 118 GDKSNWWAAYALWVFTLFGHA 138 (318)
T ss_dssp CSGGGHHHHHHHHHHHHTTCS
T ss_pred CCCCCccHHHHHHHHHHcCCC
No 410
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=21.84 E-value=75 Score=21.83 Aligned_cols=35 Identities=17% Similarity=0.128 Sum_probs=22.2
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHC----CCcEEEEeC
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK----GKKLIFVTN 63 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~----G~~~~i~Tn 63 (304)
.++.+++|+.+- -.+..+.++.+++. +.+++++|+
T Consensus 46 ~~dlvi~D~~l~-----~~~g~~~~~~l~~~~~~~~~~ii~~s~ 84 (127)
T 2jba_A 46 WPDLILLAWMLP-----GGSGIQFIKHLRRESMTRDIPVVMLTA 84 (127)
T ss_dssp CCSEEEEESEET-----TEEHHHHHHHHHTSTTTTTSCEEEEEE
T ss_pred CCCEEEEecCCC-----CCCHHHHHHHHHhCcccCCCCEEEEeC
Confidence 356666665221 11356888888863 578888887
No 411
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=21.77 E-value=3.2e+02 Score=22.05 Aligned_cols=19 Identities=5% Similarity=0.211 Sum_probs=12.1
Q ss_pred HHHHHHHcCCC-CCcEEEEc
Q 022007 231 MEILSKKFQIA-SSRMCMVG 249 (304)
Q Consensus 231 ~~~al~~lg~~-~~~~~~IG 249 (304)
...+++..|++ |+++.+||
T Consensus 210 ~~~al~~~G~~vP~di~vvg 229 (289)
T 2fep_A 210 IIHAAQDQGLSIPEDLDIIG 229 (289)
T ss_dssp HHHHHHHTTCCTTTTCEEEE
T ss_pred HHHHHHHcCCCCCCCeEEEE
Confidence 45566777876 67755554
No 412
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=21.64 E-value=1.5e+02 Score=23.12 Aligned_cols=66 Identities=9% Similarity=0.121 Sum_probs=35.6
Q ss_pred hHHHhhhccCEEEEeE--EEEcC---------Cc-c---------CccHHHHHHHHHH-CCCcEEEEeCCCCcC----HH
Q 022007 17 NITALFDSVDAFLFDC--VIWKG---------DK-L---------IDGVRQTLDVLRS-KGKKLIFVTNNSRRS----RR 70 (304)
Q Consensus 17 ~~~~~~~~~k~i~fDi--tL~~~---------~~-~---------~~~a~eal~~L~~-~G~~~~i~Tn~s~r~----~~ 70 (304)
.+..+...|+.+++|. .+... +. + +.++...++.+++ .+.++.++-|..... ..
T Consensus 60 ~l~~l~~~yD~viiD~p~~~~~~~~~~~l~~aD~viiv~~~~~~~~~~~~~~~~~l~~~~~~~~~vv~N~~~~~~~~~~~ 139 (209)
T 3cwq_A 60 QAAKYAPKYQNIVIDTQARPEDEDLEALADGCDLLVIPSTPDALALDALMLTIETLQKLGNNRFRILLTIIPPYPSKDGD 139 (209)
T ss_dssp GHHHHGGGCSEEEEEEECCCSSSHHHHHHHTSSEEEEEECSSHHHHHHHHHHHHHHHHTCSSSEEEEECSBCCTTSCHHH
T ss_pred HHHHhhhcCCEEEEeCCCCcCcHHHHHHHHHCCEEEEEecCCchhHHHHHHHHHHHHhccCCCEEEEEEecCCccchHHH
Confidence 4556667899999999 42221 11 1 2233455666665 355665665543222 23
Q ss_pred HHHHHHHhCCCc
Q 022007 71 QYAHKFHSLGVS 82 (304)
Q Consensus 71 ~~~~~l~~lG~~ 82 (304)
++.+.++++|.+
T Consensus 140 ~~~~~l~~~g~~ 151 (209)
T 3cwq_A 140 EARQLLTTAGLP 151 (209)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCc
Confidence 455556666654
No 413
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=21.63 E-value=1.2e+02 Score=21.51 Aligned_cols=61 Identities=20% Similarity=0.279 Sum_probs=35.6
Q ss_pred hhccCEEEEeEEEEcCCccCcc--HHHHHHHHHH--CCCcEEEEeC-CC--CcCHHHHHHHHHhCCCcc
Q 022007 22 FDSVDAFLFDCVIWKGDKLIDG--VRQTLDVLRS--KGKKLIFVTN-NS--RRSRRQYAHKFHSLGVSV 83 (304)
Q Consensus 22 ~~~~k~i~fDitL~~~~~~~~~--a~eal~~L~~--~G~~~~i~Tn-~s--~r~~~~~~~~l~~lG~~~ 83 (304)
+.+++.++|=.=.|.+ ...|. .+.+++++.. +|+++.+++. +. +.....+.+.|+.+|+.+
T Consensus 44 l~~~d~vi~g~p~y~~-~~~~~~~~~~fl~~l~~~l~~k~~~~~~t~g~~~~~~~~~l~~~l~~~g~~~ 111 (137)
T 2fz5_A 44 VASKDVILLGCPAMGS-EELEDSVVEPFFTDLAPKLKGKKVGLFGSYGWGSGEWMDAWKQRTEDTGATV 111 (137)
T ss_dssp HHTCSEEEEECCCBTT-TBCCHHHHHHHHHHHGGGCSSCEEEEEEEESSCCSHHHHHHHHHHHHTTCEE
T ss_pred HhcCCEEEEEccccCC-CCCCHHHHHHHHHHhhhhcCCCEEEEEEecCCCCchHHHHHHHHHHHCCCEE
Confidence 3566776663322333 34444 8899998865 6788765442 22 234456666777777763
No 414
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=21.59 E-value=1.1e+02 Score=23.69 Aligned_cols=52 Identities=12% Similarity=0.105 Sum_probs=30.7
Q ss_pred hccCEEEEeEEEEcCCccCccHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 23 DSVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 23 ~~~k~i~fDitL~~~~~~~~~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
..++++++|+.+ +-.+..+.++.+++. ..+++++|.. .........-+.|.+
T Consensus 42 ~~~dlvllD~~l-----p~~~g~~~~~~lr~~~~~~~ii~lt~~---~~~~~~~~~~~~ga~ 95 (220)
T 1p2f_A 42 EAFHVVVLDVML-----PDYSGYEICRMIKETRPETWVILLTLL---SDDESVLKGFEAGAD 95 (220)
T ss_dssp SCCSEEEEESBC-----SSSBHHHHHHHHHHHCTTSEEEEEESC---CSHHHHHHHHHHTCS
T ss_pred CCCCEEEEeCCC-----CCCCHHHHHHHHHhcCCCCcEEEEEcC---CCHHHHHHHHHcCCC
Confidence 456677666622 112356788888864 6889999983 333333344445654
No 415
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=21.39 E-value=80 Score=22.73 Aligned_cols=51 Identities=14% Similarity=0.195 Sum_probs=25.3
Q ss_pred ccCEEEEeEEEEcCCccCccHHHHHHHHHHC--CCcEEEEeCCCCcCHHHHHHHHHhCCCc
Q 022007 24 SVDAFLFDCVIWKGDKLIDGVRQTLDVLRSK--GKKLIFVTNNSRRSRRQYAHKFHSLGVS 82 (304)
Q Consensus 24 ~~k~i~fDitL~~~~~~~~~a~eal~~L~~~--G~~~~i~Tn~s~r~~~~~~~~l~~lG~~ 82 (304)
.++++++|+.+-. ....+.++.+++. +.+++++|+. ..........+.|.+
T Consensus 50 ~~dlvi~d~~l~~-----~~g~~~~~~l~~~~~~~~ii~ls~~---~~~~~~~~~~~~g~~ 102 (154)
T 2qsj_A 50 TVDLILLDVNLPD-----AEAIDGLVRLKRFDPSNAVALISGE---TDHELIRAALEAGAD 102 (154)
T ss_dssp CCSEEEECC-----------CHHHHHHHHHHCTTSEEEEC--------CHHHHHHHHTTCC
T ss_pred CCCEEEEeCCCCC-----CchHHHHHHHHHhCCCCeEEEEeCC---CCHHHHHHHHHccCC
Confidence 3677777762211 1235777777764 5788888873 333344444456665
No 416
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=21.33 E-value=3.3e+02 Score=22.12 Aligned_cols=39 Identities=5% Similarity=-0.118 Sum_probs=20.5
Q ss_pred HHHHHHHcCCC-CCcEEEEc-CCchhhHHHHHHcCCeEEEE
Q 022007 231 MEILSKKFQIA-SSRMCMVG-DRLDTDILFGQNAGCKTLLV 269 (304)
Q Consensus 231 ~~~al~~lg~~-~~~~~~IG-D~~~~Di~~a~~aG~~ti~V 269 (304)
...+++..|++ |+++.+|| |+...-+.....-.+.++..
T Consensus 206 ~~~al~~~G~~vP~di~vig~D~~~~~~~~~~~p~lttv~~ 246 (306)
T 2vk2_A 206 AIQAIKEAGLKPGKDILTGSIDGVPDIYKAMMDGEANASVE 246 (306)
T ss_dssp HHHHHHHTTCCBTTTBEEEEEECCHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHcCCCCCCCeEEEeecCCHHHHHHHHcCCceEEEe
Confidence 45566778876 67766665 33121122233445666654
No 417
>2pd2_A Hypothetical protein ST0148; structural genomics, NPPSFA, national project on protein STR and functional analyses; 2.06A {Sulfolobus tokodaii}
Probab=21.28 E-value=2e+02 Score=19.59 Aligned_cols=20 Identities=20% Similarity=0.208 Sum_probs=17.5
Q ss_pred HHHHHHHHHHCCCcEEEEeC
Q 022007 44 VRQTLDVLRSKGKKLIFVTN 63 (304)
Q Consensus 44 a~eal~~L~~~G~~~~i~Tn 63 (304)
-.+.++.|.+.|+++.+|.|
T Consensus 50 ~~~~i~~l~~~gV~~~~C~~ 69 (108)
T 2pd2_A 50 TRSIIEDLIKKNILIVGCEN 69 (108)
T ss_dssp THHHHHHHHHTTCEEEEEHH
T ss_pred HHHHHHHHHHCcCEEEecHH
Confidence 46888899999999999888
No 418
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=21.08 E-value=3.2e+02 Score=21.84 Aligned_cols=80 Identities=18% Similarity=0.232 Sum_probs=49.7
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHh-CCCccCCCCeechHHHHHHHHHhCCCCCCCeEEEEcChh-
Q 022007 40 LIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHS-LGVSVSEDEIFSSSFAAAMYLKVNNFPQENKVYVIGGEG- 117 (304)
Q Consensus 40 ~~~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~-lG~~~~~~~i~~~~~~~~~~l~~~~~~~~~~v~~~g~~~- 117 (304)
+.+-..++++.|.+.|..++++.-||... ..+.+++ +++++ +......+..+...+ .+++.+++...
T Consensus 61 ~~~~l~~~~~~L~~~g~~~iviaCNTa~~---~~~~l~~~~~iPv-----i~i~~~~~~~a~~~~---~~rVgvLaT~~T 129 (231)
T 3ojc_A 61 AAQLLSNAAISLKHAGAEVIVVCTNTMHK---VADDIEAACGLPL-----LHIADATAVQIKQQG---IDKIGLLGTRYT 129 (231)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECSSGGGG---GHHHHHHHHCSCB-----CCHHHHHHHHHHHTT---CCEEEEESCHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCchHH---HHHHHHHhCCCCE-----eccHHHHHHHHHHcC---CCEEEEEcCHHH
Confidence 44556788899999998877776655333 2244443 45542 333344444554433 25899999975
Q ss_pred -----HHHHHHHc-CCccc
Q 022007 118 -----ILEELRQA-GYTGL 130 (304)
Q Consensus 118 -----~~~~l~~~-g~~~~ 130 (304)
+.+.+.+. |+++.
T Consensus 130 ~~s~~y~~~l~~~~g~~v~ 148 (231)
T 3ojc_A 130 MEQGFYRGRLTEKHGIEVI 148 (231)
T ss_dssp HHSTTTHHHHHHTTCCEEE
T ss_pred hhchHHHHHHHhcCCCEEE
Confidence 46677777 87765
No 419
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=21.04 E-value=87 Score=27.28 Aligned_cols=32 Identities=13% Similarity=0.033 Sum_probs=24.7
Q ss_pred CCccCccHHHHHHHHHHCC-CcEEEEeCCCCcC
Q 022007 37 GDKLIDGVRQTLDVLRSKG-KKLIFVTNNSRRS 68 (304)
Q Consensus 37 ~~~~~~~a~eal~~L~~~G-~~~~i~Tn~s~r~ 68 (304)
...--+...++++.++++| .+++.+||+..-+
T Consensus 108 ~SG~T~e~l~a~~~ak~~G~a~viaIT~~~~S~ 140 (368)
T 1moq_A 108 QSGETADTLAGLRLSKELGYLGSLAICNVPGSS 140 (368)
T ss_dssp SSSCCHHHHHHHHHHTTTTCSEEEEEESSTTCH
T ss_pred CCCCCHHHHHHHHHHHHcCCCeEEEEECCCCCh
Confidence 3345567889999999999 9999999954333
No 420
>3qi7_A Putative transcriptional regulator; periplasmic binding protein-like, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.86A {Clostridium difficile}
Probab=20.79 E-value=4.3e+02 Score=23.15 Aligned_cols=81 Identities=14% Similarity=0.100 Sum_probs=47.0
Q ss_pred ccHHHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHhCCCccCCCCeechHHHHHHHHHhCCCCCCCeEE-EEcCh----
Q 022007 42 DGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEIFSSSFAAAMYLKVNNFPQENKVY-VIGGE---- 116 (304)
Q Consensus 42 ~~a~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~~l~~~~~~~~~~v~-~~g~~---- 116 (304)
++..++++.++++....+++++.....+..+.. ...+.+..|+ +..+..+..+|.+.|.. ++. +.|..
T Consensus 98 ~~~~~~i~~lkekrvDgIIi~~~~~ed~~~i~~---~~di~V~~Dn-~~Ggy~A~~~Li~~Ghk---~Ia~Isgp~~~~~ 170 (371)
T 3qi7_A 98 AGLLPALQKVKEKRPEIITISAPMGDDKNQLSQ---FVDVNLGVSA-EERGKVLAERSKEMGAK---AFIHYASTDDLKD 170 (371)
T ss_dssp CCCHHHHHHHHHHCTTSEEEESSCCSCHHHHHH---HSSEEEECCH-HHHHHHHHHHHHHTTCS---CEEEEEETTGGGS
T ss_pred cchHHHHHHHHhcCCCEEEEeccccccchhhcc---cCceEEEeCh-HHHHHHHHHHHHHCCCC---EEEEEeccccccc
Confidence 667888888888888877777644444433222 1111122222 24456677888888864 454 44432
Q ss_pred --------hHHHHHHHcCCcc
Q 022007 117 --------GILEELRQAGYTG 129 (304)
Q Consensus 117 --------~~~~~l~~~g~~~ 129 (304)
++.+.|++.|++.
T Consensus 171 ~~~~~R~~Gyk~Al~e~Gi~~ 191 (371)
T 3qi7_A 171 VNIAKRLEMIKETCKNIGLPF 191 (371)
T ss_dssp HHHHHHHHHHHHHHHHTTCCE
T ss_pred hhHHHHHHHHHHHHHHcCCCc
Confidence 2456677788765
No 421
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=20.52 E-value=31 Score=25.16 Aligned_cols=21 Identities=24% Similarity=0.376 Sum_probs=16.2
Q ss_pred ccchhhHHHhhh--ccCEEEEeE
Q 022007 12 LLSANNITALFD--SVDAFLFDC 32 (304)
Q Consensus 12 ~~~~~~~~~~~~--~~k~i~fDi 32 (304)
..+.+.+.++++ +-+.+++|+
T Consensus 23 ~is~~~l~~~l~~~~~~~~liDv 45 (139)
T 2hhg_A 23 TLTTADAIALHKSGASDVVIVDI 45 (139)
T ss_dssp EECHHHHHHHHHTTCTTEEEEEC
T ss_pred ccCHHHHHHHHhccCCCeEEEEC
Confidence 356677888887 567899999
No 422
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=20.43 E-value=1.3e+02 Score=24.24 Aligned_cols=77 Identities=21% Similarity=0.176 Sum_probs=43.5
Q ss_pred HHHHHHHHHCCCcEEEEeCCCCcCHHHHHHHHHh-CCCccCCCCeechHHH--HHHHHHhCCCCCCCeEEEEcChhHHHH
Q 022007 45 RQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHS-LGVSVSEDEIFSSSFA--AAMYLKVNNFPQENKVYVIGGEGILEE 121 (304)
Q Consensus 45 ~eal~~L~~~G~~~~i~Tn~s~r~~~~~~~~l~~-lG~~~~~~~i~~~~~~--~~~~l~~~~~~~~~~v~~~g~~~~~~~ 121 (304)
..+|..+++.+.++.+++-.. ... .+ +.+.+ +|+++..-.+.+.... ....++..|.. .++|.....+.
T Consensus 96 l~aL~~a~~~~~kIavVg~~~-~~~-~~-~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~G~~-----vVVG~~~~~~~ 167 (225)
T 2pju_A 96 LQFLAKAGKLTSSIGVVTYQE-TIP-AL-VAFQKTFNLRLDQRSYITEEDARGQINELKANGTE-----AVVGAGLITDL 167 (225)
T ss_dssp HHHHHHTTCTTSCEEEEEESS-CCH-HH-HHHHHHHTCCEEEEEESSHHHHHHHHHHHHHTTCC-----EEEESHHHHHH
T ss_pred HHHHHHHHhhCCcEEEEeCch-hhh-HH-HHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCC-----EEECCHHHHHH
Confidence 456666666677888888633 222 22 23333 5666443222233222 23344555654 57788888888
Q ss_pred HHHcCCcc
Q 022007 122 LRQAGYTG 129 (304)
Q Consensus 122 l~~~g~~~ 129 (304)
.++.|++.
T Consensus 168 A~~~Gl~~ 175 (225)
T 2pju_A 168 AEEAGMTG 175 (225)
T ss_dssp HHHTTSEE
T ss_pred HHHcCCcE
Confidence 89999764
No 423
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=20.42 E-value=99 Score=26.23 Aligned_cols=24 Identities=8% Similarity=0.281 Sum_probs=21.6
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeC
Q 022007 39 KLIDGVRQTLDVLRSKGKKLIFVTN 63 (304)
Q Consensus 39 ~~~~~a~eal~~L~~~G~~~~i~Tn 63 (304)
.+.+++.++|+.|++ |+++.++|+
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~ 126 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVIST 126 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEE
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEEC
Confidence 467889999999999 999999998
No 424
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=20.29 E-value=3.4e+02 Score=21.74 Aligned_cols=19 Identities=11% Similarity=0.179 Sum_probs=11.9
Q ss_pred HHHHHHHcCCC-CCcEEEEc
Q 022007 231 MEILSKKFQIA-SSRMCMVG 249 (304)
Q Consensus 231 ~~~al~~lg~~-~~~~~~IG 249 (304)
...+++..|+. |+++.+||
T Consensus 215 ~~~al~~~g~~vP~di~vvg 234 (296)
T 3brq_A 215 AMKALHERGVAVPEQVSVIG 234 (296)
T ss_dssp HHHHHHHHTCCTTTTCEEEE
T ss_pred HHHHHHHcCCCCCCceEEEe
Confidence 44566677875 57755555
No 425
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=20.28 E-value=3.3e+02 Score=21.68 Aligned_cols=21 Identities=5% Similarity=0.036 Sum_probs=13.7
Q ss_pred HHHHHHHcCCC-CCcEEEEcCC
Q 022007 231 MEILSKKFQIA-SSRMCMVGDR 251 (304)
Q Consensus 231 ~~~al~~lg~~-~~~~~~IGD~ 251 (304)
...+++..|+. |+++.++|=+
T Consensus 192 ~~~al~~~g~~vP~di~vvg~d 213 (277)
T 3cs3_A 192 VYKYVAETNYQMGKDIRIIGFD 213 (277)
T ss_dssp HHHHHTTSSCCBTTTEEEECSS
T ss_pred HHHHHHHcCCCCCCcEEEEEeC
Confidence 44556667775 6787777743
No 426
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=20.28 E-value=1.5e+02 Score=22.16 Aligned_cols=61 Identities=11% Similarity=0.129 Sum_probs=36.9
Q ss_pred hhccCEEEEeEEEEcCCccCccHHHHHHHHHH------CCCcEEEEe-CCCC-----cCHHHHHHHHHhCCCc
Q 022007 22 FDSVDAFLFDCVIWKGDKLIDGVRQTLDVLRS------KGKKLIFVT-NNSR-----RSRRQYAHKFHSLGVS 82 (304)
Q Consensus 22 ~~~~k~i~fDitL~~~~~~~~~a~eal~~L~~------~G~~~~i~T-n~s~-----r~~~~~~~~l~~lG~~ 82 (304)
+.+++.|+|=.-.|....+.+.+.++++.|+. .|+++.+.+ ++++ .....+.+.|+++|+.
T Consensus 54 l~~~d~ii~g~pt~g~G~~p~~~~~f~~~l~~~~~~~l~~k~~avfg~G~~~y~~~~~a~~~l~~~l~~~G~~ 126 (167)
T 1ykg_A 54 IASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGE 126 (167)
T ss_dssp GGGCSEEEEEEECBGGGBCCGGGHHHHHHHTSTTCCCCTTCEEEEEEECCTTSSSTTHHHHHHHHHHHHHTCE
T ss_pred hccCCeEEEEEcccCCCcCChhHHHHHHHHHhccccccCCCEEEEEeecCCCHHHHHHHHHHHHHHHHHCCCe
Confidence 35677777644223233455557889999874 367776554 5442 2345666777778876
No 427
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=20.26 E-value=1.3e+02 Score=21.55 Aligned_cols=50 Identities=18% Similarity=0.268 Sum_probs=35.3
Q ss_pred EEEcCCccCccHHHHHHHHHHCCCcEEEE-eCCCCcCHHHHHHHHHhCCC-cc
Q 022007 33 VIWKGDKLIDGVRQTLDVLRSKGKKLIFV-TNNSRRSRRQYAHKFHSLGV-SV 83 (304)
Q Consensus 33 tL~~~~~~~~~a~eal~~L~~~G~~~~i~-Tn~s~r~~~~~~~~l~~lG~-~~ 83 (304)
|+|..... +..+.|.+.|+++|+.+-+. --....+.+++.+.+..+|. ++
T Consensus 8 ~iY~~p~C-~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~ 59 (121)
T 3rdw_A 8 TIYHNPRC-SKSRETLALVEQQGITPQVVLYLETPPSVDKLKELLQQLGFSDA 59 (121)
T ss_dssp EEECCTTC-HHHHHHHHHHHTTTCCCEEECTTTSCCCHHHHHHHHHHTTCSSG
T ss_pred EEEECCCC-HHHHHHHHHHHHcCCCcEEEeeccCCCcHHHHHHHHHhcCCcCH
Confidence 55643332 34789999999999886544 22245688999999999998 53
No 428
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=20.20 E-value=88 Score=27.37 Aligned_cols=31 Identities=6% Similarity=0.124 Sum_probs=24.4
Q ss_pred cCCccCccHHHHHHHHHHC-CCcEEEEeCCCC
Q 022007 36 KGDKLIDGVRQTLDVLRSK-GKKLIFVTNNSR 66 (304)
Q Consensus 36 ~~~~~~~~a~eal~~L~~~-G~~~~i~Tn~s~ 66 (304)
....--+.+.++++.++++ |.+++.+||+..
T Consensus 105 S~SG~T~e~l~a~~~ak~~~Ga~vIaIT~~~~ 136 (373)
T 2aml_A 105 SQSGQSTSTISALERVKKEASVPVVALTSDVT 136 (373)
T ss_dssp CSSSCBHHHHHHHHHHHHHCCCCEEEEESCTT
T ss_pred cCCCCCHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 3334566788999999999 999999999643
No 429
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=20.08 E-value=54 Score=27.17 Aligned_cols=20 Identities=10% Similarity=0.144 Sum_probs=16.0
Q ss_pred cchhhHHHhhhccCEEEEeE
Q 022007 13 LSANNITALFDSVDAFLFDC 32 (304)
Q Consensus 13 ~~~~~~~~~~~~~k~i~fDi 32 (304)
.+.+++.+.+.+-+.+++|+
T Consensus 154 i~~~e~~~~~~~~~~~liDv 173 (280)
T 1urh_A 154 VKVTDVLLASHENTAQIIDA 173 (280)
T ss_dssp CCHHHHHHHHHHTCSEEEEC
T ss_pred EcHHHHHHHhcCCCcEEEeC
Confidence 56677778877777899999
No 430
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=20.00 E-value=1.7e+02 Score=25.19 Aligned_cols=24 Identities=13% Similarity=-0.053 Sum_probs=16.9
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeC
Q 022007 40 LIDGVRQTLDVLRSKGKKLIFVTN 63 (304)
Q Consensus 40 ~~~~a~eal~~L~~~G~~~~i~Tn 63 (304)
..+...++|+++.++|++|+.+|-
T Consensus 255 ~p~~~~~~l~~a~~~Gi~VV~~Sr 278 (327)
T 1o7j_A 255 VSVRGIAGMRKALEKGVVVMRSTR 278 (327)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCHHHHHHHHHHHHCCceEEEECC
Confidence 345566777777778888777773
Done!