BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022009
(304 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7Y175|UBAX1_ARATH UBA and UBX domain-containing protein At4g15410 OS=Arabidopsis
thaliana GN=At4g15410 PE=2 SV=1
Length = 421
Score = 308 bits (789), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 178/317 (56%), Positives = 217/317 (68%), Gaps = 20/317 (6%)
Query: 2 ASRDKKPAKPSSSR-------AGGIRTLSDLNRRSGPDSDSDDDAPQEYYTGGEKSGMLV 54
A +K+ PS R AG IRT +DLNR SD D EYYTGG+KSGM+V
Sbjct: 111 AGENKETENPSGIRSSRSRQHAGNIRTFADLNRSPADGEGSDSDEANEYYTGGQKSGMMV 170
Query: 55 QDPSKGDPNDVDAIFNQAKELGAVEGPLEHLSPS-SSSRSFTGTARLLSGETVPSAPQQP 113
QDP K DVD +F+QA++ AV+ P+E PS S+S SFTG ARLLSGE V S+PQQ
Sbjct: 171 QDPKK--VKDVDELFDQARQ-SAVDRPVE---PSRSASTSFTGAARLLSGEAVSSSPQQQ 224
Query: 114 EP-----IVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVH 168
+ I+H I FW NGFTVNDGPLR DPENA+F+ SI +SECP ELEPADK+ VH
Sbjct: 225 QQEQPQRIMHTITFWLNGFTVNDGPLRGFSDPENAAFMNSISRSECPSELEPADKKIPVH 284
Query: 169 VNLIRRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTP-VNTASSSSEGLVVDEN 227
V+L+RR EP K PFQGVGRTLG+S + +S S+ +N A + S GLVVD
Sbjct: 285 VDLVRRGENFTEPPKPKNPFQGVGRTLGASGSGSSSAPQASSAPMNVAPAPSRGLVVDPA 344
Query: 228 LPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPKVLADRT 287
P+TS+Q+RLADGTRL++ FN HHT+ D+ FIDASRPG ++ YQL MGFPPK L +
Sbjct: 345 APTTSIQLRLADGTRLVSRFNNHHTVRDVRGFIDASRPGGSKEYQLLTMGFPPKQLTELD 404
Query: 288 QTIEQAGLANSVVIQKF 304
QTIEQAG+AN+VVIQKF
Sbjct: 405 QTIEQAGIANAVVIQKF 421
>sp|Q5RBG3|NSF1C_PONAB NSFL1 cofactor p47 OS=Pongo abelii GN=NSFL1C PE=2 SV=1
Length = 370
Score = 154 bits (388), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 147/278 (52%), Gaps = 14/278 (5%)
Query: 41 QEYYTGG-EKSGM-LVQDPSKGDPND-VDAIFNQAKELGAVEGPLEHLSPSSSS--RSFT 95
Q +Y GG E+SG +V P K PN+ VD +F AKE GAV SP +S R F
Sbjct: 92 QRFYAGGSERSGQQIVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFA 151
Query: 96 GTARLL-------SGETVPSAPQQPEPIVHNIV-FWANGFTVNDGPLRRLDDPENASFLE 147
G L S Q VH ++ W +GF++++G LR DP NA FLE
Sbjct: 152 GGGYRLGAAPEEESAYVAGEKRQHSSQDVHVVLKLWKSGFSLDNGELRSYQDPSNAQFLE 211
Query: 148 SIKKSECPKELEPADKRSSVHVNLI-RRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPT 206
SI++ E P EL V++++ RD +P+ F G G+ LGS++ +
Sbjct: 212 SIRRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQVLSTS 271
Query: 207 VDSTPVNTASSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPG 266
+ + +S +++DE+ P+T++QIRLADG RL+ FN H ISDI FI +RP
Sbjct: 272 SPAQQAENEAKASSSILIDESEPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPA 331
Query: 267 TARNYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQKF 304
A + M FP K LAD +QT+++A L N+V++Q+
Sbjct: 332 MAATSFILMTTFPNKELADESQTLKEANLLNAVIVQRL 369
>sp|Q9UNZ2|NSF1C_HUMAN NSFL1 cofactor p47 OS=Homo sapiens GN=NSFL1C PE=1 SV=2
Length = 370
Score = 154 bits (388), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 147/278 (52%), Gaps = 14/278 (5%)
Query: 41 QEYYTGG-EKSGM-LVQDPSKGDPND-VDAIFNQAKELGAVEGPLEHLSPSSSS--RSFT 95
Q +Y GG E+SG +V P K PN+ VD +F AKE GAV SP +S R F
Sbjct: 92 QRFYAGGSERSGQQIVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFA 151
Query: 96 GTARLL-------SGETVPSAPQQPEPIVHNIV-FWANGFTVNDGPLRRLDDPENASFLE 147
G L S Q VH ++ W +GF++++G LR DP NA FLE
Sbjct: 152 GGGYRLGAAPEEESAYVAGEKRQHSSQDVHVVLKLWKSGFSLDNGELRSYQDPSNAQFLE 211
Query: 148 SIKKSECPKELEPADKRSSVHVNLI-RRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPT 206
SI++ E P EL V++++ RD +P+ F G G+ LGS++ +
Sbjct: 212 SIRRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQVLSTS 271
Query: 207 VDSTPVNTASSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPG 266
+ + +S +++DE+ P+T++QIRLADG RL+ FN H ISDI FI +RP
Sbjct: 272 SPAQQAENEAKASSSILIDESEPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPA 331
Query: 267 TARNYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQKF 304
A + M FP K LAD +QT+++A L N+V++Q+
Sbjct: 332 MAATSFILMTTFPNKELADESQTLKEANLLNAVIVQRL 369
>sp|Q3SZC4|NSF1C_BOVIN NSFL1 cofactor p47 OS=Bos taurus GN=NSFL1C PE=2 SV=1
Length = 370
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 148/283 (52%), Gaps = 24/283 (8%)
Query: 41 QEYYTGG-EKSGM-LVQDPSKGDPND-VDAIFNQAKELGAVEGPLEHLSPSSSS--RSFT 95
Q +Y GG E+SG +V P K PN+ VD +F AKE GAV SP +S R F
Sbjct: 92 QRFYAGGSERSGQQIVGPPRKRSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFA 151
Query: 96 GTARLLSGETVPSAPQQPEPIV------------HNIV-FWANGFTVNDGPLRRLDDPEN 142
G G + +AP++ V H ++ W GF++++G LR DP N
Sbjct: 152 G-----GGYRLGAAPEEESAYVAGERRRHSGQDVHVVLKLWKTGFSLDNGELRSYQDPSN 206
Query: 143 ASFLESIKKSECPKELEPADKRSSVHVNLI-RRDVKCPEPEKHHVPFQGVGRTLGSSSTA 201
A FLESI++ E P EL V++++ RD +P+ F G G+ LGS++
Sbjct: 207 AQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQ 266
Query: 202 ASEPTVDSTPVNTASSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFID 261
+ + + +S + +DE+ P+T++QIRLADG RL+ FN H ISDI FI
Sbjct: 267 ILNTSSPAQQAENEAKASSSISIDESQPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIV 326
Query: 262 ASRPGTARNYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQKF 304
+RP A + M FP K LAD QT+++A L N+V++Q+
Sbjct: 327 DARPAMAATSFVLMTTFPNKELADENQTLKEANLLNAVIVQRL 369
>sp|O35987|NSF1C_RAT NSFL1 cofactor p47 OS=Rattus norvegicus GN=Nsfl1c PE=1 SV=1
Length = 370
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 148/283 (52%), Gaps = 24/283 (8%)
Query: 41 QEYYTGG-EKSGM-LVQDPSKGDPND-VDAIFNQAKELGAVEGPLEHLSPSSSS--RSFT 95
Q +Y GG E+SG +V P K PN+ VD +F AKE GAV SP +S R F
Sbjct: 92 QRFYAGGSERSGQQIVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFA 151
Query: 96 GTARLLSGETVPSAPQQPEPIV------------HNIV-FWANGFTVNDGPLRRLDDPEN 142
G G + +AP++ V H ++ W GF++++G LR DP N
Sbjct: 152 G-----GGYRLGAAPEEESAYVAGERRRHSGQDVHVVLKLWKTGFSLDNGDLRSYQDPSN 206
Query: 143 ASFLESIKKSECPKELEPADKRSSVHVNLI-RRDVKCPEPEKHHVPFQGVGRTLGSSSTA 201
A FLESI++ E P EL V++++ RD +P+ F G G+ LGS++
Sbjct: 207 AQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQ 266
Query: 202 ASEPTVDSTPVNTASSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFID 261
+ + + +S ++++E P+T++QIRLADG RL+ FN H ISDI FI
Sbjct: 267 VLNTSSPAQQAENEAKASSSILINEAEPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIV 326
Query: 262 ASRPGTARNYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQKF 304
+RP A + M FP K LAD QT+++A L N+V++Q+
Sbjct: 327 DARPAMAATSFVLMTTFPNKELADENQTLKEANLLNAVIVQRL 369
>sp|Q9CZ44|NSF1C_MOUSE NSFL1 cofactor p47 OS=Mus musculus GN=Nsfl1c PE=1 SV=1
Length = 370
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 148/283 (52%), Gaps = 24/283 (8%)
Query: 41 QEYYTGG-EKSGM-LVQDPSKGDPND-VDAIFNQAKELGAVEGPLEHLSPSSSS--RSFT 95
Q +Y GG E+SG +V P K PN+ VD +F AKE GAV SP +S R F
Sbjct: 92 QRFYAGGSERSGQQIVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFA 151
Query: 96 GTARLLSGETVPSAPQQPEPIV------------HNIV-FWANGFTVNDGPLRRLDDPEN 142
G G + +AP++ V H ++ W GF++++G LR DP N
Sbjct: 152 G-----GGYRLGAAPEEESAYVAGERRRHSGQDVHVVLKLWKTGFSLDNGDLRSYQDPSN 206
Query: 143 ASFLESIKKSECPKELEPADKRSSVHVNLI-RRDVKCPEPEKHHVPFQGVGRTLGSSSTA 201
A FLESI++ E P EL V++++ RD +P+ F G G+ LGS++
Sbjct: 207 AQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQ 266
Query: 202 ASEPTVDSTPVNTASSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFID 261
+ + + +S ++++E P+T++QIRLADG RL+ FN H ISDI FI
Sbjct: 267 VLNTSSPAQQAENEAKASSSILINEAEPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIV 326
Query: 262 ASRPGTARNYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQKF 304
+RP A + M FP K LAD QT+++A L N+V++Q+
Sbjct: 327 DARPAMAATSFVLMTTFPNKELADENQTLKEANLLNAVIVQRL 369
>sp|Q5ZK10|NSF1C_CHICK NSFL1 cofactor p47 OS=Gallus gallus GN=NSFL1C PE=2 SV=1
Length = 369
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 144/283 (50%), Gaps = 24/283 (8%)
Query: 41 QEYYTGG-EKSGM-LVQDPSKGDPND-VDAIFNQAKELGAVEGPLEHLSPSSSSRS--FT 95
Q +Y GG E+SG +V P K PN+ V+ +F AKE GAV S SS+ F
Sbjct: 91 QRFYAGGSERSGQQIVGPPRKKSPNELVEDLFKGAKEHGAVAVDRTAKSSGESSKPKPFA 150
Query: 96 GTARLLSGETVPSAPQQPEPIV-----HNIV--------FWANGFTVNDGPLRRLDDPEN 142
G G + + P++ V HN V W GF+++ G LR DP N
Sbjct: 151 G-----GGYRLGATPEEESAYVAGERRHNSVQDVHVVLKLWKTGFSLDSGELRSYQDPSN 205
Query: 143 ASFLESIKKSECPKELEPADKRSSVHVNLI-RRDVKCPEPEKHHVPFQGVGRTLGSSSTA 201
A FL+ I++ E P EL + V++++ RD + +P+ F G G+ LGS++
Sbjct: 206 AQFLDDIRRGEVPAELRRLARGGQVNLDMEDHRDEEYVKPKSVFKAFTGEGQKLGSTAPQ 265
Query: 202 ASEPTVDSTPVNTASSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFID 261
+ + + +S + +DE+ P T++QIRLADG RL+ FN +H I DI FI
Sbjct: 266 VLSTSSPAQQAENEAKASSAIAIDESEPVTNIQIRLADGGRLVQKFNHNHRIRDIRLFIV 325
Query: 262 ASRPGTARNYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQKF 304
+RP A + M FP K L D QT+++A L N+V++Q+
Sbjct: 326 DARPAMAATSFVLMTTFPNKELTDENQTLKEANLLNAVIVQRL 368
>sp|Q5ZLK2|UBX2B_CHICK UBX domain-containing protein 2B OS=Gallus gallus GN=UBXN2B PE=2
SV=1
Length = 365
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 160/319 (50%), Gaps = 30/319 (9%)
Query: 4 RDKKPAKPSSSRAGGIRTLSDLNRRSGPDSDSDDDAPQEYYTG-GEKSGMLVQDPSKGDP 62
R KP S + G++ S + R S SDD Q +Y+G E G+ + S
Sbjct: 58 RSDKPTTTKMSNSKGLKIDSFRSLRKPERSMSDDKENQRFYSGDSEYRGLQIWGASNNPS 117
Query: 63 NDVDAIFNQAKELGAVEGPLEHLSPSS----SSRSFTGTARLLSGETVPSAPQQPEPIVH 118
V +F +AKE GAV PL+ S +S ++SF+G G + + Q+ ++
Sbjct: 118 KIVAELFKEAKEHGAV--PLDEASRTSGDFSKAKSFSG-----GGYRLGDSSQKHSEYIY 170
Query: 119 N--------IVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVN 170
+ W NGF+++DG LR DP NA FLES+K+ E P +L+ V+++
Sbjct: 171 GENQDVQILLKLWRNGFSLDDGELRSYSDPINAQFLESVKRGEIPVDLQRLVHGGQVNLD 230
Query: 171 LI-RRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTPVNTASSSSEGL----VVD 225
+ ++ + +P F G G+ LGS + P + STP + L ++D
Sbjct: 231 MEDHQEQEYVKPRLRFKAFSGEGQKLGSLT-----PEIVSTPSSPEEEDKSILNAPVLID 285
Query: 226 ENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPKVLAD 285
+++P+T +QIRLADG+RLI FN H I DI FI SRP A + + FP K L D
Sbjct: 286 DSVPATKIQIRLADGSRLIQRFNQTHRIKDIRDFIIQSRPAFATTDFVLVTTFPNKELTD 345
Query: 286 RTQTIEQAGLANSVVIQKF 304
+ T+ +A + N+V++Q+
Sbjct: 346 ESLTLREADILNTVILQQL 364
>sp|Q54BQ5|NSF1C_DICDI NSFL1 cofactor p47 homolog OS=Dictyostelium discoideum GN=nsfl1c
PE=3 SV=1
Length = 415
Score = 141 bits (355), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 173/324 (53%), Gaps = 32/324 (9%)
Query: 11 PSSSRAGGIRTLSDLNRRSGPDSDSDDDA------PQEYYTGGEKSGMLVQDPSK----- 59
P+ R GGIRTLSD N D D D Q+Y+TGGEKSG++V+ K
Sbjct: 93 PAGGRVGGIRTLSDFNNDDHDDHDHSDGDDDEDDRSQQYFTGGEKSGLVVESAPKKGKNG 152
Query: 60 GDPNDVDAIFNQAKELGAVEGPLEHL-SPSSSSRSFTGTARLLSGETVPSAPQQPEP--- 115
G + V+ +F+ AK GAV + + P S G S P++ +P
Sbjct: 153 GSGDIVNDVFDSAKRHGAVASNEKKVEKPDSFDSVGYQLGATDQGNRNVSKPKEKDPNSQ 212
Query: 116 -IVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELE-PADKRSSVHVNLI- 172
+ + FW GFT++DGPLR+ D+PEN L+ I++ P+EL+ A + + V LI
Sbjct: 213 VVEVKVTFWNQGFTIDDGPLRKYDNPENKELLDDIQRGIVPRELQKKATTPNGLSVTLIN 272
Query: 173 RRDVKCPEPEK-HHVPFQGVGRTLG----------SSSTAASEPTVDSTPVNTASSSSEG 221
+ EP K +V F G G+TLG +++ + ++ T++ +
Sbjct: 273 NHNQDYVEPAKPKYVAFSGGGQTLGSSSTSTNNNNNNNNNNNNRATTTSTTTTSTPNVSS 332
Query: 222 LVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPK 281
+ VD++ P+T+VQIRLA+G+RL FN HT+ D+ ++I++S G+ +++ L + GFP K
Sbjct: 333 INVDQSQPTTTVQIRLANGSRLSTTFNHSHTLQDVINYINSSS-GSNQSFDL-LTGFPQK 390
Query: 282 VLADRTQ-TIEQAGLANSVVIQKF 304
+ + T T++ AGL N+++IQK
Sbjct: 391 PVTNPTSTTLKDAGLLNALLIQKL 414
>sp|P0C627|UBX2B_RAT UBX domain-containing protein 2B OS=Rattus norvegicus GN=Ubxn2b
PE=1 SV=1
Length = 331
Score = 137 bits (345), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 148/280 (52%), Gaps = 25/280 (8%)
Query: 40 PQEYYTGGEKSGML-VQDPSKGDPNDVDAIFNQAKELGAVEGPLEHLSPSSS---SRSFT 95
P Y+G ++ G L + P G V+ +F +A+E GAV PL + SSS ++SFT
Sbjct: 61 PLRLYSGDQEYGGLHIAQPPTG--KIVNELFKEAREHGAV--PLNEATRSSSDDKAKSFT 116
Query: 96 GTARLLSGETVPSAP-----QQPEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIK 150
G L + Q + + + W+NGF+++DG LR DP NA FLES+K
Sbjct: 117 GGGYRLGSSFYKRSEYIYGENQLQDVQILLRLWSNGFSLDDGELRPYSDPTNAQFLESVK 176
Query: 151 KSECPKELEPADKRSSVHVNLI-RRDVKCPEPEKHHVPFQGVGRTLGS-----SSTAASE 204
+ E P EL+ S V +++ +D + +P F G G+ LGS ST +S
Sbjct: 177 RGEIPLELQRLVHGSQVSLDMEDHQDQEYIKPRLRFKAFSGEGQKLGSLTPEIVSTPSSP 236
Query: 205 PTVDSTPVNTASSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASR 264
D + +N A +++D+++P+T +QIRLADG+RLI FN H I D+ FI SR
Sbjct: 237 EEEDKSILNAA------VLIDDSVPTTKIQIRLADGSRLIQRFNSTHRILDVRDFIVQSR 290
Query: 265 PGTARNYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQKF 304
P A + + FP K L D + T++ A + N+V++Q+
Sbjct: 291 PEFATTDFILVTSFPSKELTDESVTLQDADILNTVILQQL 330
>sp|Q0P3R5|UBX2B_XENLA UBX domain-containing protein 2B OS=Xenopus laevis GN=ubxn2b PE=2
SV=1
Length = 350
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 136/257 (52%), Gaps = 24/257 (9%)
Query: 65 VDAIFNQAKELGAVEGPLEHLSPSSSS----RSFTGTARLLSGETVPSAP--------QQ 112
V+ +F +AKE GA+ P++ S SS + R+FTG L + +Q
Sbjct: 100 VNELFKEAKEHGAI--PIDDTSKSSGAFYRARTFTGRGYKLGDSSKREFEYMQGEDPFEQ 157
Query: 113 PEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNLI 172
+ I + W+NGF+++DG LR DP NA FLES+KK E P EL+ V++++
Sbjct: 158 GQEIQILLKLWSNGFSLDDGELRSYSDPINAEFLESVKKGEIPVELQRLVHGGQVNLDME 217
Query: 173 -RRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTPVNTASSSSEGLV----VDEN 227
+D + +P F G G+ LGS + P + STP + L +DE+
Sbjct: 218 DHQDQEYIKPRLKFKAFSGEGKKLGSVT-----PEIISTPSSPEEEHKRFLNAEVDLDEH 272
Query: 228 LPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPKVLADRT 287
+P+T +QIRLADGTRLI FNL H I D+ FI +R A+ + FP L D T
Sbjct: 273 VPTTKIQIRLADGTRLIQRFNLSHRIMDVRQFIIHARSDFAQCDFALLTTFPNVELTDET 332
Query: 288 QTIEQAGLANSVVIQKF 304
QT+E+A + N+V++Q+
Sbjct: 333 QTLEEADILNTVILQRL 349
>sp|Q0KL01|UBX2B_MOUSE UBX domain-containing protein 2B OS=Mus musculus GN=Ubxn2b PE=1
SV=2
Length = 331
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 147/280 (52%), Gaps = 25/280 (8%)
Query: 40 PQEYYTGGEK-SGMLVQDPSKGDPNDVDAIFNQAKELGAVEGPLEHLSPSS---SSRSFT 95
P Y+G K G+ + P G V+ +F +A+E GAV PL + SS ++SFT
Sbjct: 61 PHRLYSGDHKYDGLHIVQPPTG--KIVNELFKEAREHGAV--PLNEATRSSREDKTKSFT 116
Query: 96 GTARLLSGETVPSAP-----QQPEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIK 150
G L + Q + + + W NGF+++DG LR DP NA FLES+K
Sbjct: 117 GGGYRLGNSFYKRSEYIYGENQLQDVQVLLKLWRNGFSLDDGELRPYSDPTNAQFLESVK 176
Query: 151 KSECPKELEPADKRSSVHVNLI-RRDVKCPEPEKHHVPFQGVGRTLGS-----SSTAASE 204
+ E P EL+ + V++++ +D + +P F G G+ LGS ST +S
Sbjct: 177 RGETPLELQRLVHGAQVNLDMEDHQDQEYIKPRLRFKAFSGEGQKLGSLTPEIVSTPSSP 236
Query: 205 PTVDSTPVNTASSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASR 264
D + +N A +++D+++P+T +QIRLADG+RL+ FN H I D+ FI SR
Sbjct: 237 EEEDKSILNAA------VLIDDSMPTTKIQIRLADGSRLVQRFNSTHRILDVRDFIVRSR 290
Query: 265 PGTARNYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQKF 304
P A + + FP K L D T T+++A + N+V++Q+
Sbjct: 291 PEFATTDFILVTSFPSKELTDETVTLQEADILNTVILQQL 330
>sp|P0C8Q0|UBX1_EMENI UBX domain-containing protein 1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ubx1
PE=3 SV=1
Length = 373
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 145/302 (48%), Gaps = 31/302 (10%)
Query: 21 TLSDLNRRSGPDSDSDDDAPQEYYTGGEKSGMLVQDPSKGDPNDVDA-IFNQAKELGAVE 79
TL DL + SD DDD Q+++ GGEKSG+ VQ+P +D+ I +A+
Sbjct: 84 TLGDLASGAADSSDDDDDENQDFFAGGEKSGLAVQNP-----DDLKKKIIEKARRT---- 134
Query: 80 GPLEHLSPSSSSR----SFTGTARLLSGETVPS----------APQQPEPIVHNIVFWAN 125
L S S FTG AR L GE PS PQ P + + FWA+
Sbjct: 135 ----QLPASDDSEPRRNYFTGPARTLGGEDTPSRVIDTPSGPAQPQIPRRVRRTLHFWAD 190
Query: 126 GFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNLIRRDVKCPEPEKHH 185
GF+V+DG L R DDP+NA L SI++ P + A V V + + D K P+ +
Sbjct: 191 GFSVDDGELYRSDDPQNAEILNSIRQGRAPLSIMNAQHGQDVDVEIKQHDEKYVRPKPKY 250
Query: 186 VPFQGVGRTLGSSSTAASEPTVDSTPVNTASSSS-EGLVVDENLPSTSVQIRLADGTRLI 244
PF G G+ LGS + P SSS VDE+ P ++QIRL DGTRL
Sbjct: 251 QPFAGKGQRLGSPTPGIRAPAPSEPAPAPQSSSGPPKPNVDESQPVVTLQIRLGDGTRLT 310
Query: 245 AHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPKVLADRTQTIEQ--AGLANSVVIQ 302
+ FN HTI D++ F+ A+ P + + + FP K L D+ + VV+Q
Sbjct: 311 SRFNTTHTIGDVYDFVSAASPQSQARPWVLLTTFPSKELTDKAAVLGDLPEFKRGGVVVQ 370
Query: 303 KF 304
K+
Sbjct: 371 KW 372
>sp|Q14CS0|UBX2B_HUMAN UBX domain-containing protein 2B OS=Homo sapiens GN=UBXN2B PE=1
SV=1
Length = 331
Score = 134 bits (337), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 149/279 (53%), Gaps = 23/279 (8%)
Query: 40 PQEYYTGG-EKSGMLVQDPSKGDPNDVDAIFNQAKELGAVEGPLEHLSPSS---SSRSFT 95
PQ +Y+ E SG+ + PS G V+ +F +A+E GAV PL + +S S+SFT
Sbjct: 61 PQRFYSSEHEYSGLNIVRPSTG--KIVNELFKEAREHGAV--PLNEATRASGDDKSKSFT 116
Query: 96 GTARLLSGETVPSAP-----QQPEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIK 150
G L + Q + + + W+NGF+++DG LR ++P NA FLES+K
Sbjct: 117 GGGYRLGSSFCKRSEYIYGENQLQDVQILLKLWSNGFSLDDGELRPYNEPTNAQFLESVK 176
Query: 151 KSECPKELEPADKRSSVHVNLI-RRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDS 209
+ E P EL+ V++++ +D + +P F G G+ LGS + P + S
Sbjct: 177 RGEIPLELQRLVHGGQVNLDMEDHQDQEYIKPRLRFKAFSGEGQKLGSLT-----PEIVS 231
Query: 210 TPVNTASSSSEGL----VVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRP 265
TP + L ++D+++P+T +QIRLADG+RLI FN H I D+ +FI SRP
Sbjct: 232 TPSSPEEEDKSILNAVVLIDDSVPTTKIQIRLADGSRLIQRFNSTHRILDVRNFIVQSRP 291
Query: 266 GTARNYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQKF 304
A + + FP K L D + T+ +A + N+V++Q+
Sbjct: 292 EFAALDFILVTSFPNKELTDESLTLLEADILNTVLLQQL 330
>sp|P34223|UBX1_YEAST UBX domain-containing protein 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SHP1 PE=1 SV=1
Length = 423
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 29/304 (9%)
Query: 21 TLSDLNRRSGPDSDSDDDAPQEYYTGGEKSGMLVQDPSKGDPNDV-DAIFNQAK---ELG 76
+ SD+ R G D D+D P+ + GGE SG+ V DPS DPN + + +A+ ++G
Sbjct: 128 SFSDMVR--GQADDDDEDQPRNTFAGGETSGLEVTDPS--DPNSLLKDLLEKARRGGQMG 183
Query: 77 AVEGPLEHLSPSSSSRSFTGTARLLSGETVPSAPQ-----------QPEPIVHNIVFWAN 125
A G + + FTG L G T+ +A + +PE + I FW
Sbjct: 184 AENGFRDDEDHEMGANRFTGRGFRL-GSTIDAADEVVEDNTSQSQRRPEKVTREITFWKE 242
Query: 126 GFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNLIRR-DVKCPEPEKH 184
GF V DGPL R DDP N+ +L + + P +L V VN+ ++ D P +
Sbjct: 243 GFQVADGPLYRYDDPANSFYLSELNQGRAPLKLLDVQFGQEVEVNVYKKLDESYKAPTRK 302
Query: 185 HVPFQGVGRTLGSSSTAASEPTVDSTPVNTASSSSEGLVVDENLPS---TSVQIRLADGT 241
F G G+ LGS S P P N ++ E + D N P TS+QIR A+G
Sbjct: 303 LGGFSGQGQRLGSPIPGESSPA--EVPKNETPAAQEQPMPD-NEPKQGDTSIQIRYANGK 359
Query: 242 RLIAHFNLHHTISDIHSFIDA-SRPGTARNYQLQMMGFPPKVLADRTQTIEQAGLANSVV 300
R + H N T+ ++ + + + +RN+ L FP K +++ T++ A L NSVV
Sbjct: 360 REVLHCNSTDTVKFLYEHVTSNANTDPSRNFTLN-YAFPIKPISNDETTLKDADLLNSVV 418
Query: 301 IQKF 304
+Q++
Sbjct: 419 VQRW 422
>sp|Q9UT81|UBX3_SCHPO UBX domain-containing protein 3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubx3 PE=1 SV=1
Length = 410
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 146/313 (46%), Gaps = 51/313 (16%)
Query: 32 DSDSDDDAPQE---YYTGGEKSGMLVQDPSKGDPND----VDAIFNQAKELGAVEGPLEH 84
D + +D++ +E +TGGEKSG+ V+D GDP+ V I +A++ +
Sbjct: 106 DLEGNDESAEEKSHLFTGGEKSGLSVED---GDPDPKKQLVRDILEKARQHTISPLDEQD 162
Query: 85 LSPSSSSRSFT------GTARLLSGETVP---SAP--------QQPE-PIVHNIVFWANG 126
PSS + S+ GT SG T P S P QPE P+ + FW NG
Sbjct: 163 SGPSSLASSWASVGQRLGTENEASGSTTPVTQSGPPRENPPTESQPEKPLRRTLYFWRNG 222
Query: 127 FTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNLIRR-DVKCPEPEKHH 185
F+V+DGP+ DDP N L I P L + V + R D P K
Sbjct: 223 FSVDDGPIYTYDDPANQEMLRYINSGRAPLHLLGVSMNQPIDVVVQHRMDEDYVAPFK-- 280
Query: 186 VPFQGVGRTLGSSSTA-----------ASEPTVDSTPVNTASSSS---EGLVVDENLPST 231
PF G G+ LGS+ T S P+N +S+ L +DEN P+T
Sbjct: 281 -PFSGKGQRLGSTYMQPRMSQMPGGLYTDTSTSSSVPINVKPNSTTPHASLQIDENKPTT 339
Query: 232 SVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPKVLADR-TQTI 290
+Q+RL++G R + NL HT+ DI+ + A PG N+ L + FP K L D + T+
Sbjct: 340 RIQVRLSNGGRTVLTVNLSHTLHDIYEAVRAVSPG---NFILS-VPFPAKTLEDDPSVTV 395
Query: 291 EQAGLANSVVIQK 303
E A L N+ ++QK
Sbjct: 396 EAASLKNASLVQK 408
>sp|P68543|UBX2A_HUMAN UBX domain-containing protein 2A OS=Homo sapiens GN=UBXN2A PE=2
SV=1
Length = 259
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 93 SFTGTARLLSGETVPSAPQQPEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKS 152
S A+ +S + V A Q+ + V NI W NGFTVND R D + FL SIKK
Sbjct: 39 SLFEEAQKVSSKCVSPAEQKKQVDV-NIKLWKNGFTVNDD-FRSYSDGASQQFLNSIKKG 96
Query: 153 ECPKELEPADKRSSVHVNLI-RRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTP 211
E P EL+ + V V + +++ C + PF G G LGS++ P + S
Sbjct: 97 ELPSELQGIFDKEEVDVKVEDKKNEICLSTKPVFQPFSGQGHRLGSAT-----PKIVSKA 151
Query: 212 VNTASSSSEGL--VVDENL-PSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTA 268
N + L V NL P T++QI LA+G R++ FN+ H +S I FI+ + G+
Sbjct: 152 KNIEVENKNNLSAVPLNNLEPITNIQIWLANGKRIVQKFNITHRVSHIKDFIEKYQ-GSQ 210
Query: 269 RNYQLQM-MGFPPKVLADRTQTIEQAGLANSVVIQKF 304
R+ + P L D T T+E+A L N+V+IQ+
Sbjct: 211 RSPPFSLATALPVLRLLDETLTLEEADLQNAVIIQRL 247
>sp|Q99KJ0|UBX2A_MOUSE UBX domain-containing protein 2A OS=Mus musculus GN=Ubxn2a PE=2
SV=1
Length = 258
Score = 91.3 bits (225), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 101/208 (48%), Gaps = 12/208 (5%)
Query: 102 SGETVPSAPQQPEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPA 161
+G S +Q + + NI W NGFTVND R D + FL SIKK E P EL
Sbjct: 48 AGAKCLSPTEQKKQVDVNIKLWKNGFTVNDD-FRSYSDGASQQFLNSIKKGELPSELWGI 106
Query: 162 DKRSSVHVNLI-RRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTP--VNTASSS 218
+ V V + +++ C + PF G G LGS++ P + S V + S
Sbjct: 107 FDKEEVDVKVEDKKNEVCMSTKPVFQPFSGQGHRLGSAT-----PRIVSKAKSVEVDNKS 161
Query: 219 SEGLVVDENL-PSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQM-M 276
+ V NL P T +QI LA+G R + FN+ H +S I FI+ + G+ R+ +
Sbjct: 162 TLSAVSLNNLEPITRIQIWLANGERTVQRFNVSHRVSHIKDFIEKYQ-GSQRSPPFALAT 220
Query: 277 GFPPKVLADRTQTIEQAGLANSVVIQKF 304
P D T T+E+A L N+V+IQ+
Sbjct: 221 ALPFLRFLDETLTLEEADLKNAVIIQRL 248
>sp|Q922Y1|UBXN1_MOUSE UBX domain-containing protein 1 OS=Mus musculus GN=Ubxn1 PE=1 SV=1
Length = 297
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Query: 196 GSSSTAASEPTVDSTPVNTASSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISD 255
GS + +S P D PV SS S+ +Q+RL DGT L F ++
Sbjct: 181 GSVGSRSSPPATDPGPV--PSSPSQEPPTKREYDQCRIQVRLPDGTSLTQTFRAREQLAA 238
Query: 256 IHSFIDASR---PGTARNYQLQMMGFPPKVL--ADRTQTIEQAGLANSVVI 301
+ +++ R PG ++ + GFP + AD + +++ GL S V+
Sbjct: 239 VRLYVELHRGEEPGQDQDPVQLLSGFPRRAFSEADMERPLQELGLVPSAVL 289
>sp|Q499N6|UBXN1_RAT UBX domain-containing protein 1 OS=Rattus norvegicus GN=Ubxn1 PE=2
SV=2
Length = 297
Score = 39.7 bits (91), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Query: 189 QGVGRTLGSSSTAASEPTVDSTPVNTASSSSEGLVVDENLPSTSVQIRLADGTRLIAHFN 248
Q G T+GS S S P D PV SS + +Q+RL DGT L F
Sbjct: 177 QKYGGTVGSRS---SPPATDPGPV--PSSPRQEPPTKREYDQCRIQVRLPDGTSLTQTFR 231
Query: 249 LHHTISDIHSFIDASR---PGTARNYQLQMMGFPPKVL--ADRTQTIEQAGLANSVVI 301
++ + +++ R PG ++ + GFP + AD + +++ GL S V+
Sbjct: 232 AREQLAAVRLYVELHRGEEPGQDQDPVQLLSGFPRRAFSEADMERPLQELGLVPSAVL 289
>sp|Q06682|UBX5_YEAST UBX domain-containing protein 5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=UBX5 PE=1 SV=1
Length = 500
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 230 STSVQIRLADGTRLIAHFN-LHHTISDIHSFIDASRPGTARNYQLQMMGFPPKVLADR-T 287
+T +QIR DG+RL+ FN L T+ I+ I G A + + + + L D+
Sbjct: 419 TTRIQIRTGDGSRLVRRFNALEDTVRTIYEVIKTEMDGFA-DSRFTLNDHQREDLIDKLN 477
Query: 288 QTIEQAGLANSVVI 301
TI AGL NS ++
Sbjct: 478 MTIADAGLKNSSLL 491
>sp|Q6GL77|UBXN1_XENTR UBX domain-containing protein 1 OS=Xenopus tropicalis GN=ubxn1 PE=2
SV=1
Length = 287
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Query: 196 GSSSTAASEPTVDSTPVNTASSSS--EGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTI 253
G+ S S P S P T S SS + + +Q+RL DG+ L F +
Sbjct: 173 GAGSEPISPPAEASIPATTPSPSSPVQEPPTKKEYDQCRIQVRLLDGSALSQTFRAREQL 232
Query: 254 SDIHSFIDASRPGTARNYQLQMMGFPPKVLA--DRTQTIEQAGLANSVVI 301
+ + +++ + PG A + FP +V D + +++ GL S V+
Sbjct: 233 AAVRLYVELNWPGGAPGPFNLLTSFPRRVFTEEDMEKPLQELGLVPSAVL 282
>sp|Q6IP50|UBX1A_XENLA UBX domain-containing protein 1-A OS=Xenopus laevis GN=ubxn1-a PE=2
SV=1
Length = 296
Score = 35.0 bits (79), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Query: 196 GSSSTAASEPTVDSTPVNTASSSS--EGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTI 253
G+SS S P S P T S SS + + +Q+RL DG+ L F +
Sbjct: 182 GASSEPISPPAETSIPATTPSPSSPVQEPPTKKEYDQCRIQVRLLDGSALSQTFRAREQL 241
Query: 254 SDIHSFIDASRPGTARNYQLQMMGFPPKVLA--DRTQTIEQAGLANSVVI 301
+ + +++ + PG + FP +V D + +++ GL + V+
Sbjct: 242 AAVRLYVELNWPGGPPGPFSLLTSFPQRVFTEEDMEKPLQELGLVPTAVL 291
>sp|Q32KW2|UBXN1_BOVIN UBX domain-containing protein 1 OS=Bos taurus GN=UBXN1 PE=2 SV=1
Length = 297
Score = 35.0 bits (79), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 233 VQIRLADGTRLIAHFNLHHTISDIHSFIDASRP---GTARNYQLQMMGFPPKVL--ADRT 287
+Q+RL DGT L F ++ + +++ R G A++ + GFP + AD
Sbjct: 216 IQVRLPDGTSLTQTFRAREQLAAVRLYVELHRGEELGGAQDPVQLLSGFPRRAFSEADME 275
Query: 288 QTIEQAGLANSVVI 301
+ +++ GL S V+
Sbjct: 276 RPLQELGLVPSAVL 289
>sp|O14048|UBX2_SCHPO UBX domain-containing protein 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubx2 PE=1 SV=1
Length = 427
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 231 TSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPKVL-ADRTQT 289
T +QIR+ +G R I F+L +S +++++ G + Q + F K L T
Sbjct: 354 TRIQIRMPNGARFIRRFSLTDPVSKVYAYVKGVAEGADK--QPFSLTFQRKSLWTSLDST 411
Query: 290 IEQAGLANSVVIQKF 304
I++AG+ N+ + +F
Sbjct: 412 IKEAGIQNTALQFEF 426
>sp|Q9VI55|UFL1_DROME E3 UFM1-protein ligase 1 homolog OS=Drosophila melanogaster
GN=CG1104 PE=1 SV=1
Length = 782
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 51/122 (41%), Gaps = 18/122 (14%)
Query: 4 RDKKPAKPSSSRAGG------IRTLSDLNRRSGP-----DSDSDDDAPQEYYTGGEKSGM 52
RD++ K SS +AGG +T S + G DSD +DDA Q GG S
Sbjct: 419 RDERRKKASSGKAGGGAQGRETKTKSTKKHQRGKAAAQFDSDDEDDAQQGSRGGGGASKK 478
Query: 53 LVQDPSKGDPNDVDAIFNQAKELGAVEGPLEHLSPSSSS---RSFTGTARLLSGETVPSA 109
V+ D+ + + E E LEHLS S +S F TA + E +
Sbjct: 479 AVKPLELVKTADIVKLITASLE----EEGLEHLSKSIASLYTNQFNQTALARAQELFEAT 534
Query: 110 PQ 111
PQ
Sbjct: 535 PQ 536
>sp|Q92T74|PHK1_RHIME Probable phosphoketolase 1 OS=Rhizobium meliloti (strain 1021)
GN=R00106 PE=3 SV=1
Length = 789
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 42/114 (36%), Gaps = 19/114 (16%)
Query: 133 PLRRLDDPENASFLESIKKSECPKELEPADKRSSV-----------------HVN--LIR 173
P+ +D PE+ LE KS P+EL D R + H N L+
Sbjct: 296 PMGDMDKPEHIRILEGWMKSYRPEELFDGDGRLTAELAALAPTGRRRMSDNPHANGGLLL 355
Query: 174 RDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTPVNTASSSSEGLVVDEN 227
RD+K P+ + V Q G S+ D +N S + DEN
Sbjct: 356 RDLKMPDFRDYAVAVQSPGAATAESARVMGSYLRDVMKLNLKSGNFRLFSPDEN 409
>sp|Q04323|UBXN1_HUMAN UBX domain-containing protein 1 OS=Homo sapiens GN=UBXN1 PE=1 SV=2
Length = 297
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 233 VQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQ--LQMM-GFPPKVL--ADRT 287
+Q+RL DGT L F ++ + +++ R Q +Q++ GFP + AD
Sbjct: 216 IQVRLPDGTSLTQTFRAREQLAAVRLYVELHRGEELGGGQDPVQLLSGFPRRAFSEADME 275
Query: 288 QTIEQAGLANSVVI 301
+ +++ GL S V+
Sbjct: 276 RPLQELGLVPSAVL 289
>sp|Q9BZE9|ASPC1_HUMAN Tether containing UBX domain for GLUT4 OS=Homo sapiens GN=ASPSCR1
PE=1 SV=1
Length = 553
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 226 ENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPK-VLA 284
E P ++++ D L F T+ D+ F+ + ++ L + PPK VL
Sbjct: 386 ERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFVRSHLGNPELSFYLFIT--PPKTVLD 443
Query: 285 DRTQTIEQAGLANSVVI 301
D TQT+ QA L + ++
Sbjct: 444 DHTQTLFQANLFPAALV 460
>sp|Q6GLV4|UBX1B_XENLA UBX domain-containing protein 1-B OS=Xenopus laevis GN=ubxn1-b PE=2
SV=1
Length = 290
Score = 32.3 bits (72), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 196 GSSSTAASEPTVDSTPVNTASSSS--EGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTI 253
G+ S S P S P S SS + + +Q+RL DG+ L F +
Sbjct: 176 GAGSEPISPPAETSVPATAPSPSSPVQEPPTKKEYDQCRIQVRLLDGSALSQTFRAREQL 235
Query: 254 SDIHSFIDASRPGTARNYQLQMMGFPPKVLA--DRTQTIEQAGLANSVVI 301
+ + +++ + PG + FP +V D + +++ GL + V+
Sbjct: 236 AAVRLYVELNWPGGPPEPFSLLTSFPRRVFTEEDMEKPLQELGLVPTAVL 285
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.129 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,330,199
Number of Sequences: 539616
Number of extensions: 5475416
Number of successful extensions: 16427
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 16213
Number of HSP's gapped (non-prelim): 215
length of query: 304
length of database: 191,569,459
effective HSP length: 117
effective length of query: 187
effective length of database: 128,434,387
effective search space: 24017230369
effective search space used: 24017230369
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)