BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022012
(304 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B0UHY1|RL1_METS4 50S ribosomal protein L1 OS=Methylobacterium sp. (strain 4-46)
GN=rplA PE=3 SV=1
Length = 235
Score = 124 bits (311), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 182 VLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFA 241
V L DA+K +K +KA FDET E + L + PR + +VRG NLP+G + VRVA FA
Sbjct: 20 VYSLTDAVKMIKDRSKAKFDETFEISMNLGVDPRHADQMVRGVCNLPNGSGRTVRVAVFA 79
Query: 242 EGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMP 301
GA A+EARAAGADIVG +L+E I G +D ++C +T MP + ++ K+L GLMP
Sbjct: 80 RGAKADEARAAGADIVGAEDLLETI-QGGTIDFDRCIATPDMMPLVGRLGKVLGPRGLMP 138
Query: 302 NPK 304
NPK
Sbjct: 139 NPK 141
>sp|B9JDR8|RL1_AGRRK 50S ribosomal protein L1 OS=Agrobacterium radiobacter (strain K84 /
ATCC BAA-868) GN=rplA PE=3 SV=1
Length = 232
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 81/120 (67%), Gaps = 1/120 (0%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L AI VK A A FDET+E + L + PR + +VRG +NLP+G ++VRVA FA GA
Sbjct: 21 LTQAIGMVKERAIAKFDETIEVSMNLGVDPRHADQMVRGVVNLPNGTGRSVRVAVFARGA 80
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGADIVG EL+ EI GK+D ++C +T MP + ++ K+L G+MPNPK
Sbjct: 81 KADEAKAAGADIVGAEELV-EIVQGGKIDFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 139
>sp|A6U848|RL1_SINMW 50S ribosomal protein L1 OS=Sinorhizobium medicae (strain WSM419)
GN=rplA PE=3 SV=1
Length = 232
Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 82/120 (68%), Gaps = 1/120 (0%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L +A+ +K A A FDET+E + L + PR + +VRG +NLP+G ++VRVA FA GA
Sbjct: 23 LTEAVTMIKERATAKFDETIEVAMNLGVDPRHADQMVRGVVNLPNGTGRSVRVAVFARGA 82
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGAD+VG EL+ EI GK+D ++C +T MP + ++ K+L G+MPNPK
Sbjct: 83 KADEAKAAGADVVGAEELV-EIVQGGKIDFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 141
>sp|Q92QI0|RL1_RHIME 50S ribosomal protein L1 OS=Rhizobium meliloti (strain 1021)
GN=rplA PE=3 SV=1
Length = 232
Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 82/120 (68%), Gaps = 1/120 (0%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L +A+ VK A A FDET+E + L + PR + +VRG +NLP+G ++VRVA FA GA
Sbjct: 23 LTEAVTLVKERATAKFDETIEVAMNLGVDPRHADQMVRGVVNLPNGTGRSVRVAVFARGA 82
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGAD+VG EL+ EI GK+D ++C +T MP + ++ K+L G+MPNPK
Sbjct: 83 KADEAKAAGADVVGAEELV-EIVQGGKIDFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 141
>sp|B8IS73|RL1_METNO 50S ribosomal protein L1 OS=Methylobacterium nodulans (strain
ORS2060 / LMG 21967) GN=rplA PE=3 SV=1
Length = 235
Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 182 VLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFA 241
V L DA+K +K AKA FDET E + L + PR + +VRG NLP+G + VRVA FA
Sbjct: 20 VYSLADAVKLIKERAKAKFDETFEISMNLGVDPRHADQMVRGVCNLPNGSGRTVRVAVFA 79
Query: 242 EGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMP 301
GA A+EA+AAGADIVG +L+E I G ++ ++C +T MP + ++ K+L GLMP
Sbjct: 80 RGAKADEAKAAGADIVGAEDLLETI-QGGTINFDRCIATPDMMPLVGRLGKVLGPRGLMP 138
Query: 302 NPK 304
NPK
Sbjct: 139 NPK 141
>sp|C3MAW8|RL1_RHISN 50S ribosomal protein L1 OS=Rhizobium sp. (strain NGR234) GN=rplA
PE=3 SV=1
Length = 232
Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 182 VLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFA 241
V L +A+ VK A A FDET+E + L + PR + +VRG +NLP+G ++VRVA FA
Sbjct: 20 VYGLTEAVTLVKERATAKFDETIEVAMNLGVDPRHADQMVRGVVNLPNGTGRSVRVAVFA 79
Query: 242 EGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMP 301
GA A+EA+AAGAD+VG +L+ EI GK+D ++C +T MP + ++ K+L G+MP
Sbjct: 80 RGAKADEAKAAGADVVGAEDLV-EIVQGGKIDFDRCIATPDMMPLVGRLGKVLGPRGMMP 138
Query: 302 NPK 304
NPK
Sbjct: 139 NPK 141
>sp|Q8UE05|RL1_AGRT5 50S ribosomal protein L1 OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=rplA PE=3 SV=2
Length = 231
Score = 121 bits (303), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L DAI VK A A FDETVE + L + PR + +VRG +NLP+G + VRVA FA G
Sbjct: 23 LTDAISMVKERAVAKFDETVEVSMNLGVDPRHADQMVRGVVNLPNGTGRDVRVAVFARGV 82
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA AAGAD+VG EL+ EI GK+D ++C +T MP + ++ K+L G+MPNPK
Sbjct: 83 KADEATAAGADVVGAEELV-EIVQGGKIDFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 141
>sp|B9JVM5|RL1_AGRVS 50S ribosomal protein L1 OS=Agrobacterium vitis (strain S4 / ATCC
BAA-846) GN=rplA PE=3 SV=1
Length = 231
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 182 VLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFA 241
++ L DAI VK A A FDET+E + L + PR + +VRG +NLP+G + VRVA FA
Sbjct: 20 LVALSDAISMVKERAVAKFDETIEIAMNLGVDPRHADQMVRGVVNLPNGTGRDVRVAVFA 79
Query: 242 EGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMP 301
GA A+EARAAGA++VG +L+ EI GK+D ++C +T MP + ++ K+L G+MP
Sbjct: 80 RGAKADEARAAGAEVVGAEDLV-EIVQGGKIDFDRCIATPDMMPLVGRLGKVLGPRGMMP 138
Query: 302 NPK 304
NPK
Sbjct: 139 NPK 141
>sp|Q89J70|RL1_BRAJA 50S ribosomal protein L1 OS=Bradyrhizobium japonicum (strain USDA
110) GN=rplA PE=3 SV=1
Length = 230
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 82/120 (68%), Gaps = 1/120 (0%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L +AIK VK AKA FDET+E + L + PR + +VRG + LP+G + +RV FA GA
Sbjct: 22 LAEAIKMVKERAKAKFDETIEVAINLGVDPRHADQMVRGVVTLPNGTGRTLRVGVFARGA 81
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGAD+VG +L+E++ +G +D ++C +T MP + ++ K+L GLMPNPK
Sbjct: 82 KADEAKAAGADVVGAEDLVEKV-QNGSIDFDRCIATPDMMPLVGRLGKVLGPRGLMPNPK 140
>sp|B3PW56|RL1_RHIE6 50S ribosomal protein L1 OS=Rhizobium etli (strain CIAT 652)
GN=rplA PE=3 SV=1
Length = 233
Score = 117 bits (294), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L AI VK A A FDET+E + L + PR + +VRG +NLP+G + VRVA FA GA
Sbjct: 21 LTQAIGMVKERAVAKFDETIEVSMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGA 80
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGAD+VG +L+ EI GK++ ++C +T MP + ++ K+L G+MPNPK
Sbjct: 81 KADEAKAAGADVVGAEDLV-EIVQGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 139
>sp|Q2K9M7|RL1_RHIEC 50S ribosomal protein L1 OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=rplA PE=3 SV=1
Length = 233
Score = 117 bits (294), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L AI VK A A FDET+E + L + PR + +VRG +NLP+G + VRVA FA GA
Sbjct: 21 LTTAIGMVKERAVAKFDETIEVSMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGA 80
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGAD+VG +L+ EI GK++ ++C +T MP + ++ K+L G+MPNPK
Sbjct: 81 KADEAKAAGADVVGAEDLV-EIVQGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 139
>sp|A6X0A6|RL1_OCHA4 50S ribosomal protein L1 OS=Ochrobactrum anthropi (strain ATCC
49188 / DSM 6882 / NCTC 12168) GN=rplA PE=3 SV=1
Length = 233
Score = 117 bits (294), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Query: 182 VLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFA 241
+ DL AI VK A A FDET+E + L + PR + +VRG +NLP+G + VRVA FA
Sbjct: 20 LYDLSAAIGLVKERAVAKFDETIEIAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFA 79
Query: 242 EGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMP 301
G AEEA+ AGADIVG EL EI + GK+D ++C +T MP + ++ K+L G+MP
Sbjct: 80 RGDKAEEAKKAGADIVGAEELF-EIVNGGKIDFDRCIATPDMMPLVGRLGKVLGPRGMMP 138
Query: 302 NPK 304
NPK
Sbjct: 139 NPK 141
>sp|Q1MIF3|RL1_RHIL3 50S ribosomal protein L1 OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=rplA PE=3 SV=1
Length = 233
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L AI VK A A FDET+E + L + PR + +VRG +NLP+G + VRVA FA GA
Sbjct: 21 LTLAIGMVKERAVAKFDETIEVSMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGA 80
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGADIVG +L+ EI GK++ ++C +T MP + ++ K+L G+MPNPK
Sbjct: 81 KADEAKAAGADIVGAEDLV-EIVQGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 139
>sp|B6JER6|RL1_OLICO 50S ribosomal protein L1 OS=Oligotropha carboxidovorans (strain
ATCC 49405 / DSM 1227 / OM5) GN=rplA PE=3 SV=1
Length = 230
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
+ DAIK VK A A FDET+E + L + PR + +VRG + LP+G + +RV FA GA
Sbjct: 22 IADAIKLVKERATAKFDETIEVAINLGVDPRHADQMVRGVVTLPNGTGRTLRVGVFARGA 81
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGAD+VG +L+ EI GK++ ++C +T MP + ++ K+L G+MPNPK
Sbjct: 82 KADEAKAAGADVVGAEDLV-EIVQGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 140
>sp|A4WVL9|RL1_RHOS5 50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC
17025 / ATH 2.4.3) GN=rplA PE=3 SV=1
Length = 232
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 83/126 (65%), Gaps = 1/126 (0%)
Query: 179 SRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVA 238
+ ++ + DA+ +K A A FDET+E + L + PR + +VRG + LP+G K VRVA
Sbjct: 17 GKDMVSVEDAVALIKGAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVA 76
Query: 239 FFAEGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHG 298
FA GA A+EA+AAGADIVG +L+E I SGK++ ++C +T MP + ++ KIL
Sbjct: 77 VFARGAKADEAKAAGADIVGAEDLMETI-QSGKIEFDRCIATPDMMPLVGRLGKILGPRN 135
Query: 299 LMPNPK 304
LMPNPK
Sbjct: 136 LMPNPK 141
>sp|A8LLK0|RL1_DINSH 50S ribosomal protein L1 OS=Dinoroseobacter shibae (strain DFL 12)
GN=rplA PE=3 SV=1
Length = 232
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 83/122 (68%), Gaps = 1/122 (0%)
Query: 183 LDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAE 242
L + +A+ +KANA + FDETVE + L + PR + +VRG ++LP+G K VRVA FA
Sbjct: 21 LTVEEAVALIKANATSKFDETVEIAMCLGVDPRHADQMVRGVVSLPNGTGKTVRVAVFAR 80
Query: 243 GADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPN 302
G AEEA+AAGADIVG +L+E I SGK++ ++C +T MP + ++ KIL LMPN
Sbjct: 81 GPKAEEAQAAGADIVGAEDLMETI-QSGKIEFDRCIATPDMMPIVGRLGKILGPRNLMPN 139
Query: 303 PK 304
PK
Sbjct: 140 PK 141
>sp|Q0ANP0|RL1_MARMM 50S ribosomal protein L1 OS=Maricaulis maris (strain MCS10) GN=rplA
PE=3 SV=1
Length = 232
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 80/118 (67%), Gaps = 1/118 (0%)
Query: 187 DAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGADA 246
DA+ VK+NAKA FDET+E + L + PR + +VRG NLP+G ++VRVA FA+G A
Sbjct: 25 DAVAHVKSNAKAKFDETIELAINLGVDPRHADQMVRGVCNLPNGTGRSVRVAVFAKGPKA 84
Query: 247 EEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
EEA AGAD+VG +L+E+I G ++ +K +T MP + ++ K+L G+MPNPK
Sbjct: 85 EEATKAGADVVGAEDLMEQI-QGGNINFDKVIATPDMMPLVGRLGKVLGPRGMMPNPK 141
>sp|B0CH44|RL1_BRUSI 50S ribosomal protein L1 OS=Brucella suis (strain ATCC 23445 / NCTC
10510) GN=rplA PE=3 SV=1
Length = 233
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Query: 182 VLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFA 241
+ DL AI VK A A FDETVE + L + PR + +VRG +NLP+G + VRVA FA
Sbjct: 20 LYDLSAAIGLVKERAVAKFDETVEIAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFA 79
Query: 242 EGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMP 301
G AEEA+ AGADIVG EL EI + GK++ ++C +T MP + ++ K+L G+MP
Sbjct: 80 RGDKAEEAKKAGADIVGAEELF-EIVNGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMP 138
Query: 302 NPK 304
NPK
Sbjct: 139 NPK 141
>sp|Q8G066|RL1_BRUSU 50S ribosomal protein L1 OS=Brucella suis biovar 1 (strain 1330)
GN=rplA PE=3 SV=1
Length = 233
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Query: 182 VLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFA 241
+ DL AI VK A A FDETVE + L + PR + +VRG +NLP+G + VRVA FA
Sbjct: 20 LYDLSAAIGLVKERAVAKFDETVEIAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFA 79
Query: 242 EGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMP 301
G AEEA+ AGADIVG EL EI + GK++ ++C +T MP + ++ K+L G+MP
Sbjct: 80 RGDKAEEAKKAGADIVGAEELF-EIVNGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMP 138
Query: 302 NPK 304
NPK
Sbjct: 139 NPK 141
>sp|A5VR18|RL1_BRUO2 50S ribosomal protein L1 OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=rplA PE=3 SV=1
Length = 233
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Query: 182 VLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFA 241
+ DL AI VK A A FDETVE + L + PR + +VRG +NLP+G + VRVA FA
Sbjct: 20 LYDLSAAIGLVKERAVAKFDETVEIAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFA 79
Query: 242 EGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMP 301
G AEEA+ AGADIVG EL EI + GK++ ++C +T MP + ++ K+L G+MP
Sbjct: 80 RGDKAEEAKKAGADIVGAEELF-EIVNGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMP 138
Query: 302 NPK 304
NPK
Sbjct: 139 NPK 141
>sp|C0RJL4|RL1_BRUMB 50S ribosomal protein L1 OS=Brucella melitensis biotype 2 (strain
ATCC 23457) GN=rplA PE=3 SV=1
Length = 233
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Query: 182 VLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFA 241
+ DL AI VK A A FDETVE + L + PR + +VRG +NLP+G + VRVA FA
Sbjct: 20 LYDLSAAIGLVKERAVAKFDETVEIAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFA 79
Query: 242 EGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMP 301
G AEEA+ AGADIVG EL EI + GK++ ++C +T MP + ++ K+L G+MP
Sbjct: 80 RGDKAEEAKKAGADIVGAEELF-EIVNGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMP 138
Query: 302 NPK 304
NPK
Sbjct: 139 NPK 141
>sp|A9M5R3|RL1_BRUC2 50S ribosomal protein L1 OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=rplA PE=3 SV=1
Length = 233
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Query: 182 VLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFA 241
+ DL AI VK A A FDETVE + L + PR + +VRG +NLP+G + VRVA FA
Sbjct: 20 LYDLSAAIGLVKERAVAKFDETVEIAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFA 79
Query: 242 EGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMP 301
G AEEA+ AGADIVG EL EI + GK++ ++C +T MP + ++ K+L G+MP
Sbjct: 80 RGDKAEEAKKAGADIVGAEELF-EIVNGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMP 138
Query: 302 NPK 304
NPK
Sbjct: 139 NPK 141
>sp|Q57CP5|RL1_BRUAB 50S ribosomal protein L1 OS=Brucella abortus biovar 1 (strain
9-941) GN=rplA PE=3 SV=1
Length = 233
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Query: 182 VLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFA 241
+ DL AI VK A A FDETVE + L + PR + +VRG +NLP+G + VRVA FA
Sbjct: 20 LYDLSAAIGLVKERAVAKFDETVEIAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFA 79
Query: 242 EGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMP 301
G AEEA+ AGADIVG EL EI + GK++ ++C +T MP + ++ K+L G+MP
Sbjct: 80 RGDKAEEAKKAGADIVGAEELF-EIVNGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMP 138
Query: 302 NPK 304
NPK
Sbjct: 139 NPK 141
>sp|Q2YM12|RL1_BRUA2 50S ribosomal protein L1 OS=Brucella abortus (strain 2308) GN=rplA
PE=3 SV=1
Length = 233
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Query: 182 VLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFA 241
+ DL AI VK A A FDETVE + L + PR + +VRG +NLP+G + VRVA FA
Sbjct: 20 LYDLSAAIGLVKERAVAKFDETVEIAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFA 79
Query: 242 EGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMP 301
G AEEA+ AGADIVG EL EI + GK++ ++C +T MP + ++ K+L G+MP
Sbjct: 80 RGDKAEEAKKAGADIVGAEELF-EIVNGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMP 138
Query: 302 NPK 304
NPK
Sbjct: 139 NPK 141
>sp|B2S690|RL1_BRUA1 50S ribosomal protein L1 OS=Brucella abortus (strain S19) GN=rplA
PE=3 SV=1
Length = 233
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Query: 182 VLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFA 241
+ DL AI VK A A FDETVE + L + PR + +VRG +NLP+G + VRVA FA
Sbjct: 20 LYDLSAAIGLVKERAVAKFDETVEIAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFA 79
Query: 242 EGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMP 301
G AEEA+ AGADIVG EL EI + GK++ ++C +T MP + ++ K+L G+MP
Sbjct: 80 RGDKAEEAKKAGADIVGAEELF-EIVNGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMP 138
Query: 302 NPK 304
NPK
Sbjct: 139 NPK 141
>sp|B9KL80|RL1_RHOSK 50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain KD131 /
KCTC 12085) GN=rplA PE=3 SV=1
Length = 232
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 83/126 (65%), Gaps = 1/126 (0%)
Query: 179 SRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVA 238
+ ++ + DA+ +K A A FDET+E + L + PR + +VRG + LP+G K VRVA
Sbjct: 17 GKDLISVEDAVALIKQAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVA 76
Query: 239 FFAEGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHG 298
FA GA A+EA+AAGADIVG +L+E I SGK++ ++C +T MP + ++ KIL
Sbjct: 77 VFARGAKADEAKAAGADIVGAEDLMETI-QSGKIEFDRCIATPDMMPLVGRLGKILGPRN 135
Query: 299 LMPNPK 304
LMPNPK
Sbjct: 136 LMPNPK 141
>sp|Q3J5T3|RL1_RHOS4 50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=rplA PE=3 SV=1
Length = 232
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 83/126 (65%), Gaps = 1/126 (0%)
Query: 179 SRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVA 238
+ ++ + DA+ +K A A FDET+E + L + PR + +VRG + LP+G K VRVA
Sbjct: 17 GKDLISVEDAVALIKQAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVA 76
Query: 239 FFAEGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHG 298
FA GA A+EA+AAGADIVG +L+E I SGK++ ++C +T MP + ++ KIL
Sbjct: 77 VFARGAKADEAKAAGADIVGAEDLMETI-QSGKIEFDRCIATPDMMPLVGRLGKILGPRN 135
Query: 299 LMPNPK 304
LMPNPK
Sbjct: 136 LMPNPK 141
>sp|A3PGI6|RL1_RHOS1 50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9) GN=rplA1 PE=3 SV=1
Length = 232
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 83/126 (65%), Gaps = 1/126 (0%)
Query: 179 SRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVA 238
+ ++ + DA+ +K A A FDET+E + L + PR + +VRG + LP+G K VRVA
Sbjct: 17 GKDLISVEDAVALIKQAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVA 76
Query: 239 FFAEGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHG 298
FA GA A+EA+AAGADIVG +L+E I SGK++ ++C +T MP + ++ KIL
Sbjct: 77 VFARGAKADEAKAAGADIVGAEDLMETI-QSGKIEFDRCIATPDMMPLVGRLGKILGPRN 135
Query: 299 LMPNPK 304
LMPNPK
Sbjct: 136 LMPNPK 141
>sp|Q8YHQ0|RL1_BRUME 50S ribosomal protein L1 OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=rplA PE=3 SV=1
Length = 233
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Query: 182 VLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFA 241
+ DL AI VK A A FDETVE + L + PR + +VRG +NLP+G + VRVA FA
Sbjct: 20 LYDLSAAIGLVKERAVAKFDETVEIAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFA 79
Query: 242 EGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMP 301
G AEEA+ AGADIVG EL EI + GK++ ++C +T MP + ++ K+L G+MP
Sbjct: 80 RGDKAEEAKKAGADIVGAEELF-EIVNGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMP 138
Query: 302 NPK 304
NPK
Sbjct: 139 NPK 141
>sp|Q211C5|RL1_RHOPB 50S ribosomal protein L1 OS=Rhodopseudomonas palustris (strain
BisB18) GN=rplA PE=3 SV=1
Length = 230
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L DAIK VK A + FDET+E + L + PR + +VRG + LP+G + +RV FA GA
Sbjct: 22 LADAIKMVKERAVSKFDETIEIAINLGVDPRHADQMVRGVVTLPNGTGRTLRVGVFARGA 81
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EARAAGAD+VG +L+E++ G ++ ++C +T MP + ++ K+L G+MPNPK
Sbjct: 82 KADEARAAGADVVGAEDLVEKV-QGGTIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 140
>sp|B5ZYS4|RL1_RHILW 50S ribosomal protein L1 OS=Rhizobium leguminosarum bv. trifolii
(strain WSM2304) GN=rplA PE=3 SV=1
Length = 233
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Query: 188 AIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGADAE 247
AI VK A A FDET+E + L + PR + +VRG +NLP+G + VRVA FA G A+
Sbjct: 24 AIGMVKERAVAKFDETIEVSMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGVKAD 83
Query: 248 EARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
EA+AAGADIVG +L+ EI GK++ ++C +T MP + ++ K+L G+MPNPK
Sbjct: 84 EAKAAGADIVGAEDLV-EIVQGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 139
>sp|A7HWQ1|RL1_PARL1 50S ribosomal protein L1 OS=Parvibaculum lavamentivorans (strain
DS-1 / DSM 13023 / NCIMB 13966) GN=rplA PE=3 SV=1
Length = 233
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L +A+K VK A FDET+E + L + PR + +VRG + LP G + VRVA FA+G
Sbjct: 23 LDEAVKMVKDRASVKFDETIEVAIALGVDPRHADQMVRGVVALPSGSGRTVRVAVFAKGD 82
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A++ARAAGADIVG +L EI SGK+D ++C +T MP + ++ K+L GLMPNPK
Sbjct: 83 KADQARAAGADIVGDDDL-AEIVQSGKIDFDRCIATPDMMPLVGRLGKVLGPRGLMPNPK 141
>sp|Q11HB0|RL1_MESSB 50S ribosomal protein L1 OS=Mesorhizobium sp. (strain BNC1) GN=rplA
PE=3 SV=1
Length = 232
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L +A+K +K A A FDET+E + L + PR + +VRG +NLP+G ++VRVA FA+G
Sbjct: 23 LDEAVKVIKERATAKFDETIEVAMNLGVDPRHADQMVRGVVNLPNGTGRSVRVAVFAKGD 82
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGADIVG +L+E + G+++ ++C +T MP + ++ K+L GLMPNPK
Sbjct: 83 KADEAKAAGADIVGAEDLVETV-QKGEINFDRCIATPDMMPLVGRLGKVLGPRGLMPNPK 141
>sp|C5C0K8|RL1_BEUC1 50S ribosomal protein L1 OS=Beutenbergia cavernae (strain ATCC
BAA-8 / DSM 12333 / NBRC 16432) GN=rplA PE=3 SV=1
Length = 238
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 186 MDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGAD 245
++A++ KA A FD TVE RL + PRK + +VRGT+NLPHG K RV FA G
Sbjct: 24 LEAVRLAKAGASTKFDSTVEVAFRLGVDPRKADQMVRGTVNLPHGTGKTARVLVFAVGER 83
Query: 246 AEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
AE+ARAAGAD VGG ELIE++A G +D + +T M ++ ++ ++L GLMPNP+
Sbjct: 84 AEQARAAGADEVGGDELIEKVA-GGYVDFDAAVATPDLMGKVGRLGRVLGPRGLMPNPR 141
>sp|A1B012|RL1_PARDP 50S ribosomal protein L1 OS=Paracoccus denitrificans (strain Pd
1222) GN=rplA PE=3 SV=1
Length = 233
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 82/122 (67%), Gaps = 1/122 (0%)
Query: 183 LDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAE 242
L + +A+K VK NA A FDETVE + L + PR + +VRG + LP+G K VRVA FA
Sbjct: 21 LAVEEAVKLVKENASAKFDETVEIAMNLGVDPRHADQMVRGVVTLPNGTGKDVRVAVFAR 80
Query: 243 GADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPN 302
G A+EA+AAGA+IVG +L+E I SGK++ ++C +T MP + ++ KIL LMPN
Sbjct: 81 GPKADEAKAAGAEIVGAEDLMETI-QSGKIEFDRCIATPDMMPLVGRLGKILGPRNLMPN 139
Query: 303 PK 304
PK
Sbjct: 140 PK 141
>sp|Q28UY1|RL1_JANSC 50S ribosomal protein L1 OS=Jannaschia sp. (strain CCS1) GN=rplA
PE=3 SV=1
Length = 232
Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 83/127 (65%), Gaps = 1/127 (0%)
Query: 178 ESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRV 237
E + + + +A+ +K N+K FDET+E ++L + PR + +VRGT+NLP+G K VRV
Sbjct: 16 EGKENITVEEAVALLKGNSKTKFDETIEIAMKLGVDPRHADQMVRGTVNLPNGTGKTVRV 75
Query: 238 AFFAEGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQH 297
A FA G AEEA AAGADIVG +L+E + G ++ ++C +T MP + ++ K+L
Sbjct: 76 AVFARGPKAEEATAAGADIVGAEDLMETV-QGGTIEFDRCIATPDMMPIVGRLGKVLGPR 134
Query: 298 GLMPNPK 304
LMPNPK
Sbjct: 135 NLMPNPK 141
>sp|A8HTX8|RL1_AZOC5 50S ribosomal protein L1 OS=Azorhizobium caulinodans (strain ATCC
43989 / DSM 5975 / ORS 571) GN=rplA PE=3 SV=1
Length = 232
Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L +A+ +KA A FDET+E + L + PR + +VRG NLP+G + VRVA FA GA
Sbjct: 23 LDEALALLKARTTAKFDETIEVAINLGVDPRHADQMVRGVCNLPNGSGRTVRVAVFARGA 82
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGADIVG +L+E I G ++ ++C +T MP + ++ K+L GLMPNPK
Sbjct: 83 KADEAKAAGADIVGAEDLLETI-QGGTIEFDRCIATPDLMPLVGRLGKVLGPRGLMPNPK 141
>sp|Q160X4|RL1_ROSDO 50S ribosomal protein L1 OS=Roseobacter denitrificans (strain ATCC
33942 / OCh 114) GN=rplA PE=3 SV=1
Length = 232
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 79/118 (66%), Gaps = 1/118 (0%)
Query: 187 DAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGADA 246
+A+ +KAN+ FDETVE + L + PR + +VRG + LP+G K VRVA FA GA A
Sbjct: 25 EAVALIKANSSVKFDETVEIAMNLGVDPRHADQMVRGVVGLPNGTGKTVRVAVFARGAKA 84
Query: 247 EEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
+EA AAGADIVG +L+E + SGK++ ++C +T MP + ++ K+L LMPNPK
Sbjct: 85 DEATAAGADIVGAEDLMETV-QSGKIEFDRCIATPDMMPIVGRLGKVLGPRNLMPNPK 141
>sp|Q5LMQ0|RL1_RUEPO 50S ribosomal protein L1 OS=Ruegeria pomeroyi (strain ATCC 700808 /
DSM 15171 / DSS-3) GN=rplA PE=3 SV=1
Length = 232
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 80/122 (65%), Gaps = 1/122 (0%)
Query: 183 LDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAE 242
L + A+ +K+ A A FDETVE + L + PR + +VRG + LP+G K VRVA FA
Sbjct: 21 LSVEQAVALIKSAASAKFDETVEIAMNLGVDPRHADQMVRGVVGLPNGTGKTVRVAVFAR 80
Query: 243 GADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPN 302
G AEEA+AAGADIVG +L+E I SGK++ ++C +T MP + ++ KIL LMPN
Sbjct: 81 GPKAEEAQAAGADIVGAEDLMETI-QSGKIEFDRCIATPDMMPVVGRLGKILGPRNLMPN 139
Query: 303 PK 304
PK
Sbjct: 140 PK 141
>sp|A1SEI7|RL1_NOCSJ 50S ribosomal protein L1 OS=Nocardioides sp. (strain BAA-499 /
JS614) GN=rplA PE=3 SV=2
Length = 240
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
Query: 188 AIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGADAE 247
AIK K ++K FDETV+ +RL + PRK + +VRGT+NLPHG K RV FA AE
Sbjct: 25 AIKIAKTSSKKKFDETVDVVMRLGVDPRKADQMVRGTVNLPHGTGKTARVLVFANADKAE 84
Query: 248 EARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
AR AGAD+VGG ELI+++A G LD + +T M ++ ++ ++L GLMPNPK
Sbjct: 85 AAREAGADVVGGDELIDKVA-GGWLDFDAVVATPDMMGKVGRLGRVLGPRGLMPNPK 140
>sp|A6Q1M0|RL1_NITSB 50S ribosomal protein L1 OS=Nitratiruptor sp. (strain SB155-2)
GN=rplA PE=3 SV=1
Length = 235
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 83/129 (64%), Gaps = 1/129 (0%)
Query: 176 KKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAV 235
K E + + +A+K+VK A FDETVE +RL + PR + +VRG++ LPHG K V
Sbjct: 15 KIEKGKIYSIDEAVKKVKELKSAKFDETVELALRLGVDPRHADQMVRGSVVLPHGTGKTV 74
Query: 236 RVAFFAEGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILN 295
RVA FA+GA A+EA+ GADIVG +L+E+I +G +D + +T M + KI +IL
Sbjct: 75 RVAVFAKGAKADEAKECGADIVGAEDLVEQI-QNGNIDFDIAIATPDMMGLVGKIGRILG 133
Query: 296 QHGLMPNPK 304
GLMPNPK
Sbjct: 134 PKGLMPNPK 142
>sp|Q2IXS7|RL1_RHOP2 50S ribosomal protein L1 OS=Rhodopseudomonas palustris (strain
HaA2) GN=rplA PE=3 SV=1
Length = 229
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 81/120 (67%), Gaps = 1/120 (0%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L +A+K VK A + FDET+E + L + PR + +VRG + LP+G + VRV FA GA
Sbjct: 22 LDEAVKMVKERAVSKFDETIEVALNLGVDPRHADQMVRGVVMLPNGTGRTVRVGVFARGA 81
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGAD+VG +L+E++ +G ++ ++C +T MP + ++ K+L G+MPNPK
Sbjct: 82 KADEAKAAGADVVGAEDLVEQV-QAGNINFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 140
>sp|B3QC04|RL1_RHOPT 50S ribosomal protein L1 OS=Rhodopseudomonas palustris (strain
TIE-1) GN=rplA PE=3 SV=1
Length = 229
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 81/120 (67%), Gaps = 1/120 (0%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L +A+K VK A + FDET+E + L + PR + +VRG + LP+G + VRV FA GA
Sbjct: 22 LDEAVKLVKERAISKFDETIEVAINLGVDPRHADQMVRGVVMLPNGTGRTVRVGVFARGA 81
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGAD+VG +L+E++ +G ++ ++C +T MP + ++ K+L G+MPNPK
Sbjct: 82 KADEAKAAGADVVGAEDLVEQV-QAGNINFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 140
>sp|Q6N4R5|RL1_RHOPA 50S ribosomal protein L1 OS=Rhodopseudomonas palustris (strain ATCC
BAA-98 / CGA009) GN=rplA PE=1 SV=3
Length = 229
Score = 111 bits (278), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 81/120 (67%), Gaps = 1/120 (0%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L +A+K VK A + FDET+E + L + PR + +VRG + LP+G + VRV FA GA
Sbjct: 22 LDEAVKLVKERAISKFDETIEVAINLGVDPRHADQMVRGVVMLPNGTGRTVRVGVFARGA 81
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGAD+VG +L+E++ +G ++ ++C +T MP + ++ K+L G+MPNPK
Sbjct: 82 KADEAKAAGADVVGAEDLVEQV-QAGNINFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 140
>sp|A7IKP7|RL1_XANP2 50S ribosomal protein L1 OS=Xanthobacter autotrophicus (strain ATCC
BAA-1158 / Py2) GN=rplA PE=3 SV=1
Length = 232
Score = 111 bits (278), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L +A+ +K A FDET+E + L + PR + +VRG NLP+G + VRVA FA GA
Sbjct: 23 LDEALALLKERTTAKFDETIEVALNLGVDPRHADQMVRGVCNLPNGSGRTVRVAVFARGA 82
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGADIVG +L+E I G ++ ++C +T MP + ++ K+L GLMPNPK
Sbjct: 83 KADEAKAAGADIVGAEDLLETI-QGGTIEFDRCIATPDLMPLVGRLGKVLGPRGLMPNPK 141
>sp|A5GWK1|RL1_SYNR3 50S ribosomal protein L1 OS=Synechococcus sp. (strain RCC307)
GN=rplA PE=3 SV=1
Length = 235
Score = 111 bits (278), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
Query: 186 MDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGAD 245
++A+ VKANA A FDET+EAHVRL I P+ T+ +R T+ LP G +++R+A G
Sbjct: 23 LEAVSLVKANATAKFDETIEAHVRLGIDPKYTDQQLRTTVALPKGTGRSIRIAVITRGEK 82
Query: 246 AEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
EA+AAGA++VG EL++ IA G++D + +T MP++ K+ ++L GLMPNPK
Sbjct: 83 VAEAKAAGAELVGDEELVDSIA-GGQMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPK 140
>sp|Q07KJ8|RL1_RHOP5 50S ribosomal protein L1 OS=Rhodopseudomonas palustris (strain
BisA53) GN=rplA PE=3 SV=1
Length = 230
Score = 111 bits (278), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
+ +AIK VK A + FDET+E L + PR + +VRG ++LP+G + +RV FA GA
Sbjct: 22 IAEAIKMVKERAVSKFDETIEIAFNLGVDPRHADQMVRGVVSLPNGTGRTLRVGVFARGA 81
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EARAAGAD+VG +L+E++ G ++ ++C +T MP + ++ K+L G+MPNPK
Sbjct: 82 KADEARAAGADVVGAEDLVEKV-QGGTIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 140
>sp|Q6G3X8|RL1_BARHE 50S ribosomal protein L1 OS=Bartonella henselae (strain ATCC 49882
/ Houston 1) GN=rplA PE=3 SV=1
Length = 232
Score = 111 bits (277), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 77/120 (64%), Gaps = 1/120 (0%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L DA+ VK A A FDET+E + L + PR + +VRG ++LP+G + VRVA FA G
Sbjct: 23 LKDAVSMVKERAIAKFDETIEISMNLGVDPRHADQMVRGVVHLPNGTGRNVRVAVFARGD 82
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
AEEA+ AGADIVG +L E I + G +D ++C +T MP + ++ KIL LMPNPK
Sbjct: 83 KAEEAKTAGADIVGAEDLFESI-NGGAIDFDRCIATPDMMPLVGRLGKILGPRNLMPNPK 141
>sp|Q134R4|RL1_RHOPS 50S ribosomal protein L1 OS=Rhodopseudomonas palustris (strain
BisB5) GN=rplA PE=3 SV=1
Length = 229
Score = 110 bits (276), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L +A+K VK A + FDET+E + L + PR + +VRG + LP+G + +RV FA GA
Sbjct: 22 LDEAVKMVKERATSKFDETIEVALNLGVDPRHADQMVRGVVMLPNGTGRTLRVGVFARGA 81
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGAD+VG +L+E++ G ++ ++C +T MP + ++ K+L G+MPNPK
Sbjct: 82 KADEAKAAGADVVGAEDLVEQV-QGGNINFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 140
>sp|A5GPD4|RL1_SYNPW 50S ribosomal protein L1 OS=Synechococcus sp. (strain WH7803)
GN=rplA PE=3 SV=1
Length = 235
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 186 MDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGAD 245
++AIK VK NA A FDETVEAH RL I P+ T+ +R T+ LPHG + VR+A G
Sbjct: 23 LEAIKLVKENATAKFDETVEAHARLGIDPKYTDQQLRTTVALPHGTGQTVRIAVITRGEK 82
Query: 246 AEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
EA+AAGA++ G +L+E I S G++D + +T MP++ K+ ++L GLMPNPK
Sbjct: 83 VAEAKAAGAELAGDEDLVETI-SKGEMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPK 140
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,575,355
Number of Sequences: 539616
Number of extensions: 4931370
Number of successful extensions: 15904
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 139
Number of HSP's that attempted gapping in prelim test: 14204
Number of HSP's gapped (non-prelim): 1065
length of query: 304
length of database: 191,569,459
effective HSP length: 117
effective length of query: 187
effective length of database: 128,434,387
effective search space: 24017230369
effective search space used: 24017230369
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)