Query 022014
Match_columns 304
No_of_seqs 137 out of 741
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 07:22:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022014.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022014hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02629 powdery mildew resist 100.0 1E-102 2E-107 749.6 28.9 285 19-304 103-387 (387)
2 PF13839 PC-Esterase: GDSL/SGN 100.0 1.1E-55 2.3E-60 402.3 23.1 245 22-303 1-262 (263)
3 cd01842 SGNH_hydrolase_like_5 98.2 1.1E-05 2.4E-10 70.7 10.4 148 39-253 2-152 (183)
4 COG2845 Uncharacterized protei 91.3 2.2 4.7E-05 41.1 10.4 156 32-250 112-268 (354)
5 cd01834 SGNH_hydrolase_like_2 75.4 1.5 3.2E-05 37.1 1.3 15 36-50 1-15 (191)
6 cd01829 SGNH_hydrolase_peri2 S 68.7 3.5 7.5E-05 35.5 2.1 94 121-253 59-153 (200)
7 cd01841 NnaC_like NnaC (CMP-Ne 66.3 26 0.00056 29.3 7.0 71 158-253 70-140 (174)
8 cd01841 NnaC_like NnaC (CMP-Ne 65.3 3 6.5E-05 35.1 1.0 13 37-49 1-13 (174)
9 PF00185 OTCace: Aspartate/orn 63.3 5.9 0.00013 33.9 2.5 26 35-61 1-26 (158)
10 cd01827 sialate_O-acetylestera 61.9 44 0.00096 28.2 7.8 104 121-265 67-175 (188)
11 cd01844 SGNH_hydrolase_like_6 61.1 25 0.00055 29.7 6.1 30 160-191 75-104 (177)
12 cd01825 SGNH_hydrolase_peri1 S 55.3 5.2 0.00011 33.8 0.8 73 158-254 76-148 (189)
13 cd01833 XynB_like SGNH_hydrola 54.6 69 0.0015 26.1 7.5 98 121-264 40-144 (157)
14 cd01835 SGNH_hydrolase_like_3 53.5 6.8 0.00015 33.6 1.2 92 120-253 68-159 (193)
15 cd01844 SGNH_hydrolase_like_6 52.8 6.8 0.00015 33.3 1.1 13 38-50 1-13 (177)
16 cd01838 Isoamyl_acetate_hydrol 51.5 6.7 0.00014 33.3 0.8 57 121-192 63-119 (199)
17 cd01832 SGNH_hydrolase_like_1 50.2 6.9 0.00015 33.1 0.7 70 158-254 87-156 (185)
18 PRK14805 ornithine carbamoyltr 47.7 14 0.0003 35.2 2.4 26 34-61 145-170 (302)
19 cd01827 sialate_O-acetylestera 46.0 11 0.00023 32.0 1.3 13 38-50 2-14 (188)
20 cd01822 Lysophospholipase_L1_l 45.1 11 0.00024 31.5 1.2 46 121-188 64-109 (177)
21 PRK10528 multifunctional acyl- 44.7 12 0.00027 32.4 1.5 15 36-50 10-24 (191)
22 cd01831 Endoglucanase_E_like E 44.5 11 0.00024 31.7 1.1 28 158-187 76-103 (169)
23 PF09949 DUF2183: Uncharacteri 44.1 20 0.00043 28.6 2.4 22 27-48 55-76 (100)
24 cd01820 PAF_acetylesterase_lik 42.5 17 0.00037 32.0 2.0 32 159-192 109-140 (214)
25 cd01836 FeeA_FeeB_like SGNH_hy 37.3 18 0.00039 30.8 1.3 51 121-191 67-117 (191)
26 cd00229 SGNH_hydrolase SGNH_hy 37.1 12 0.00027 29.9 0.3 56 119-192 63-118 (187)
27 cd04501 SGNH_hydrolase_like_4 36.8 17 0.00037 30.7 1.1 91 121-254 59-149 (183)
28 cd01839 SGNH_arylesterase_like 36.7 18 0.00038 31.5 1.2 86 159-263 101-191 (208)
29 cd01830 XynE_like SGNH_hydrola 35.5 19 0.00041 31.4 1.2 31 158-192 101-131 (204)
30 PLN02342 ornithine carbamoyltr 33.6 35 0.00075 33.3 2.7 25 34-60 192-216 (348)
31 COG0078 ArgF Ornithine carbamo 32.8 33 0.00072 32.8 2.4 22 34-57 151-172 (310)
32 PF12026 DUF3513: Domain of un 32.3 2.6 5.6E-05 38.2 -4.9 18 32-49 130-147 (210)
33 cd01828 sialate_O-acetylestera 32.2 20 0.00044 29.8 0.8 87 121-253 48-134 (169)
34 PRK04284 ornithine carbamoyltr 30.5 42 0.00092 32.4 2.7 26 34-60 153-178 (332)
35 cd01821 Rhamnogalacturan_acety 30.0 27 0.00058 30.0 1.2 93 120-253 64-156 (198)
36 PRK02102 ornithine carbamoyltr 28.3 49 0.0011 32.0 2.8 26 34-60 153-178 (331)
37 PRK03515 ornithine carbamoyltr 27.9 47 0.001 32.1 2.6 26 34-60 154-179 (336)
38 cd00885 cinA Competence-damage 26.8 47 0.001 28.8 2.1 21 280-300 141-161 (170)
39 PRK03670 competence damage-ind 26.6 46 0.00099 30.9 2.2 22 280-301 150-171 (252)
40 KOG3482 Small nuclear ribonucl 26.5 57 0.0012 24.6 2.2 22 20-41 2-23 (79)
41 PF06462 Hyd_WA: Propeller; I 26.5 66 0.0014 20.0 2.2 22 179-200 8-30 (32)
42 cd04502 SGNH_hydrolase_like_7 26.3 31 0.00068 28.8 0.9 31 158-190 69-99 (171)
43 cd01840 SGNH_hydrolase_yrhL_li 26.3 31 0.00067 28.6 0.9 25 229-254 97-121 (150)
44 cd04506 SGNH_hydrolase_YpmR_li 25.9 33 0.00071 29.5 1.0 29 158-188 101-129 (204)
45 PRK08192 aspartate carbamoyltr 25.7 56 0.0012 31.6 2.7 27 34-60 157-183 (338)
46 PRK01713 ornithine carbamoyltr 25.6 58 0.0013 31.4 2.7 27 34-61 154-180 (334)
47 PLN02527 aspartate carbamoyltr 25.0 62 0.0013 30.8 2.8 27 34-60 149-175 (306)
48 PF01861 DUF43: Protein of unk 24.3 37 0.00081 31.5 1.1 12 34-45 43-54 (243)
49 PRK11891 aspartate carbamoyltr 24.2 66 0.0014 32.3 2.9 27 34-60 239-265 (429)
50 PRK12562 ornithine carbamoyltr 24.0 65 0.0014 31.2 2.8 26 34-60 154-179 (334)
51 PRK00856 pyrB aspartate carbam 24.0 65 0.0014 30.7 2.7 28 34-61 154-181 (305)
52 TIGR00658 orni_carb_tr ornithi 23.9 65 0.0014 30.6 2.7 25 34-60 146-170 (304)
53 PRK00779 ornithine carbamoyltr 23.9 59 0.0013 30.9 2.4 27 32-60 148-174 (304)
54 PF03193 DUF258: Protein of un 22.8 74 0.0016 27.5 2.6 37 23-61 22-58 (161)
55 PF14647 FAM91_N: FAM91 N-term 22.0 82 0.0018 30.2 2.9 31 21-61 108-138 (308)
56 COG0034 PurF Glutamine phospho 21.7 56 0.0012 33.0 1.8 39 30-69 342-381 (470)
57 TIGR00670 asp_carb_tr aspartat 21.6 75 0.0016 30.2 2.6 28 33-60 147-174 (301)
58 PF13472 Lipase_GDSL_2: GDSL-l 21.3 2.3E+02 0.005 22.6 5.3 95 120-254 60-154 (179)
59 PF13242 Hydrolase_like: HAD-h 21.3 71 0.0015 23.1 1.9 16 35-50 20-35 (75)
60 COG1578 Uncharacterized conser 20.6 1.3E+02 0.0029 28.4 4.0 40 17-56 132-171 (285)
61 PRK14804 ornithine carbamoyltr 20.4 82 0.0018 30.1 2.6 26 33-60 150-175 (311)
62 PF15590 Imm15: Immunity prote 20.0 1.1E+02 0.0023 22.9 2.5 23 174-196 28-50 (69)
No 1
>PLN02629 powdery mildew resistance 5
Probab=100.00 E-value=1e-102 Score=749.56 Aligned_cols=285 Identities=82% Similarity=1.430 Sum_probs=265.3
Q ss_pred CccCCCCCHHHHHHHhcCCeEEEEeccchhhHHHHHHHHhhccCCCCceEEeeCCCeeEEEEeecCeEEEEEeccceeee
Q 022014 19 IVCLIRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYGISVSFYRAPYLVDI 98 (304)
Q Consensus 19 ~C~Lprfd~~~fl~~lrgK~l~FVGDSl~Rnq~~SLlClL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLV~~ 98 (304)
+|+||||||.+|||+|||||||||||||+|||||||+|||++++|+.++...++++..+|+|++||+||+||||||||+.
T Consensus 103 gC~LPRFda~~fLe~~RgKrl~FVGDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~ 182 (387)
T PLN02629 103 NCELPRFNGLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDI 182 (387)
T ss_pred CCCCCCcCHHHHHHHhcCCeEEEeccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEee
Confidence 99999999999999999999999999999999999999999999877767777788999999999999999999999998
Q ss_pred cccccceeEEeccCCccccCcccccEEEEeccccccccCcCCceeeeecCceeeccCCHHHHHHHHHHHHHHHHHhhcCC
Q 022014 99 DVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDR 178 (304)
Q Consensus 99 ~~~~~~~~l~lD~~~~~a~~w~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~ 178 (304)
++....+.|+||++++.+..|+++|||||||||||.+++..++++|++.|+.++++|+..+||++||+||++||++++++
T Consensus 183 ~~~~~~~~l~LD~id~~a~~w~~~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~ 262 (387)
T PLN02629 183 DAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDR 262 (387)
T ss_pred ecCCCceeEEecCcchhhhhhccCCEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCC
Confidence 87766788999999988899999999999999999999988999999999999999999999999999999999999998
Q ss_pred CCceEEEeecCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHHHhcCCCeEEeecccccccccC
Q 022014 179 SKTRVFFQSISPTHYNPSEWSAGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSELRKD 258 (304)
Q Consensus 179 ~k~~vffRt~SP~Hf~gg~W~~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdIt~ls~~R~D 258 (304)
.+++|||||+||+||+||+||+++++. +|+|+++|+|+.++++.+....+++++++++++++.+|++||||+||++|||
T Consensus 263 ~kt~vffrT~SP~Hfe~g~Wn~gg~~~-~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~D 341 (387)
T PLN02629 263 SRTRVFFQSISPTHYNPSEWSAGASTT-TKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKD 341 (387)
T ss_pred CCcEEEEEecCcccccCCCcCCCCCCC-CCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCC
Confidence 999999999999999999999955544 5789999999998777766667788999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccCCCCCCCCCcccccCCCchhHHHHHHHHHhhC
Q 022014 259 GHPSIYSGDLNPKQKANPDRSADCSHWCLPGLPDTWNQLLYTALFY 304 (304)
Q Consensus 259 gHp~~y~~~~~~~~~~~~~~~~DC~HWCLPGv~DtWNelL~~~L~~ 304 (304)
||||+|+++++++++++|..++||+||||||||||||||||++|++
T Consensus 342 gHPs~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~~ 387 (387)
T PLN02629 342 GHPSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF 387 (387)
T ss_pred CCcccccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHhC
Confidence 9999998766677777888899999999999999999999999975
No 2
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=100.00 E-value=1.1e-55 Score=402.27 Aligned_cols=245 Identities=37% Similarity=0.747 Sum_probs=195.0
Q ss_pred CCCCCHHHHHHHhcCCeEEEEeccchhhHHHHHHHHhhccCC-----CCceEEeeCCCeeEEEEeecCeEEEEEecccee
Q 022014 22 LIRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAP-----RTRTHMTRGDPLSTFKFLDYGISVSFYRAPYLV 96 (304)
Q Consensus 22 Lprfd~~~fl~~lrgK~l~FVGDSl~Rnq~~SLlClL~~~~~-----~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLV 96 (304)
||+||+.++|++||||+|+|||||++||||+||+|+|.+..+ +......+......+.++++|+||+|+|+|||+
T Consensus 1 ~~~~d~~~cL~~lr~k~i~fiGDS~~Rq~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~p~l~ 80 (263)
T PF13839_consen 1 LPRFDARECLQRLRNKRIVFIGDSTTRQQYESLVCLLGPEVPSWQESPHSGIEFPNHRNFRYNFPDYNVTLSFYWDPFLV 80 (263)
T ss_pred CChhhHHHHHHHccCCEEEEEechhhHHHHHHHHHHHhccccccccccccccccccCCceEEeecCCCeEEEEecccccc
Confidence 689999999999999999999999999999999999998776 333333334567888999999999999999999
Q ss_pred eecccccceeEEeccCC-ccccCcc----cccEEEEeccccccccCcCCceeeeecCceeeccCCHHHHHHHHHHHHHHH
Q 022014 97 DIDVVHGKRVLKLEDIS-GNGKSWL----NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANW 171 (304)
Q Consensus 97 ~~~~~~~~~~l~lD~~~-~~a~~w~----~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~w 171 (304)
+. +|.++ +.+..|. ..||||||+|+||.+.+....+ ++. .++...++|+.++++++++
T Consensus 81 ~~----------l~~~~~~~~~~~~~~~~~pdvvV~nsG~W~~~~~~~~~~-----~~~--~~~~~~~~y~~~l~~~~~~ 143 (263)
T PF13839_consen 81 DQ----------LDSIDEEIANNWPTSGARPDVVVINSGLWYLRRSGFIEW-----GDN--KEINPLEAYRNRLRTLADW 143 (263)
T ss_pred cc----------ccccchhhhccccccccCCCEEEEEcchhhhhcchhccc-----CCC--cCcchHHHHHHHHHHHHHH
Confidence 75 55555 2245666 8999999999999987532222 323 5667789999999999999
Q ss_pred HHhhcCCCC--ceEEEeecCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHHH---hcCCCeEE
Q 022014 172 VDNNIDRSK--TRVFFQSISPTHYNPSEWSAGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIR---DMHSPAYL 246 (304)
Q Consensus 172 v~~~~~~~k--~~vffRt~SP~Hf~gg~W~~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~l 246 (304)
+.+.+++.+ ++||||+++|.||++++|++ ||+|. +....+ ....+...+.+++. ..+.++++
T Consensus 144 ~~~~~~~~~~~~~v~~r~~~P~h~~~~~~~~------gg~c~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (263)
T PF13839_consen 144 VRRLLDRSKPPTRVFWRTTSPVHFEGGDWNS------GGSCN----PPRREE---ITNEQIDELNEALREALKKNSRVHL 210 (263)
T ss_pred HHhhhccccccceEEEEecCCcccccccccc------CCCcC----cccccC---CCHHHHHHHHHHHHHHhhcCCCcee
Confidence 998887665 89999999999999999999 89995 111111 11222233333332 34678999
Q ss_pred eec-cccccccc-CCCCCCCCCCCCcccCCCCCCCCCcccccCCCchhHHHHHHHHHhh
Q 022014 247 LDI-TMLSELRK-DGHPSIYSGDLNPKQKANPDRSADCSHWCLPGLPDTWNQLLYTALF 303 (304)
Q Consensus 247 LdI-t~ls~~R~-DgHp~~y~~~~~~~~~~~~~~~~DC~HWCLPGv~DtWNelL~~~L~ 303 (304)
||| |.++.+|+ ||||++|++.. +....||+|||+|||+|+||+|||++||
T Consensus 211 ldi~~~~~~~r~~d~H~~~~~~~~-------~~~~~Dc~Hw~~p~v~d~~~~lL~~~lc 262 (263)
T PF13839_consen 211 LDIFTMLSSFRPDDAHPGIYRNQW-------PRQPQDCLHWCLPGVIDTWNELLLNLLC 262 (263)
T ss_pred eeecchhhhccccccCcccccCCC-------CCCCCCCcCcCCCcHHHHHHHHHHHHhh
Confidence 999 99999999 99999998632 1235899999999999999999999997
No 3
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.22 E-value=1.1e-05 Score=70.67 Aligned_cols=148 Identities=11% Similarity=0.131 Sum_probs=84.6
Q ss_pred EEEEeccchhhHHHHHHHHhhccCCCCceEEeeCCCeeEEEEeecCeEEEEEeccceeeecccccceeEEeccCCccccC
Q 022014 39 VMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKS 118 (304)
Q Consensus 39 l~FVGDSl~Rnq~~SLlClL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLV~~~~~~~~~~l~lD~~~~~a~~ 118 (304)
++|+|||+.|-.|-=|+|||+...--...... .+. +........++. ..
T Consensus 2 v~~lgds~~ravykdlv~l~q~~~~l~~~~lr-------------------------~k~-e~~f~~D~ll~g-----g~ 50 (183)
T cd01842 2 VVILGDSIQRAVYKDLVLLLQKDSLLSSSQLK-------------------------AKG-ELSFENDVLLEG-----GR 50 (183)
T ss_pred EEEEccHHHHHHHHHHHHHhcCCccccHHHHh-------------------------hhh-hhhhccceeecC-----Cc
Confidence 68999999999999999999933110000000 000 000000111111 23
Q ss_pred cccccEEEEeccccccccCcCCceeeeecCceeeccCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEeecCCCCCCCCCC
Q 022014 119 WLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEW 198 (304)
Q Consensus 119 w~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~k~~vffRt~SP~Hf~gg~W 198 (304)
| ||||||+|.|=.. +|.. ...+-|++-|.+.+.=+.+-+ +.++++||.|++|-= ++.
T Consensus 51 ~---DVIi~Ns~LWDl~--------ry~~--------~~~~~Y~~NL~~Lf~rLk~~l-p~~allIW~tt~Pv~-~~~-- 107 (183)
T cd01842 51 L---DLVIMNSCLWDLS--------RYQR--------NSMKTYRENLERLFSKLDSVL-PIECLIVWNTAMPVA-EEI-- 107 (183)
T ss_pred e---eEEEEecceeccc--------ccCC--------CCHHHHHHHHHHHHHHHHhhC-CCccEEEEecCCCCC-cCC--
Confidence 3 9999999999331 2321 125789999999997665433 457899999999962 110
Q ss_pred CCCCCCCCCCCCCCCCccC---CCCCCCCCCchHHHHHHHHHHhcCCCeEEeeccccc
Q 022014 199 SAGSTSSTAKNCYGETAPM---SGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLS 253 (304)
Q Consensus 199 ~~~~~~~~gg~C~~~t~P~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdIt~ls 253 (304)
+|| +-.|- ...+......+.|....+++++-+ |.++|+..-.
T Consensus 108 -------~gg----fl~~~~~~~~~~lr~dv~eaN~~A~~va~~~~--~dVlDLh~~f 152 (183)
T cd01842 108 -------KGG----FLLPELHDLSKSLRYDVLEGNFYSATLAKCYG--FDVLDLHYHF 152 (183)
T ss_pred -------cCc----eeccccccccccchhHHHHHHHHHHHHHHHcC--ceeeehHHHH
Confidence 022 11121 111111222345777777776654 8999998655
No 4
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.27 E-value=2.2 Score=41.07 Aligned_cols=156 Identities=15% Similarity=0.133 Sum_probs=84.9
Q ss_pred HHhcCCeEEEEeccchhhHHHHHHHHhhccCCCCceEEeeCCCeeEEEEeecCeEEEEEeccceeeecccccceeEEecc
Q 022014 32 VKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYGISVSFYRAPYLVDIDVVHGKRVLKLED 111 (304)
Q Consensus 32 ~~lrgK~l~FVGDSl~Rnq~~SLlClL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLV~~~~~~~~~~l~lD~ 111 (304)
+.=.++++.||||||++..-+-|.--|.+... ..+. +.......+..++| |-|.-=+-+.
T Consensus 112 k~~~a~kvLvvGDslm~gla~gl~~al~t~~~-i~i~-~~sn~SSGlvr~dY-----fdWpk~i~~~------------- 171 (354)
T COG2845 112 KSRDADKVLVVGDSLMQGLAEGLDKALATSPG-ITIV-TRSNGSSGLVRDDY-----FDWPKAIPEL------------- 171 (354)
T ss_pred hCCCCCEEEEechHHhhhhHHHHHHHhccCCC-cEEE-EeecCCCCcccccc-----cccHHHHHHH-------------
Confidence 33468999999999999999998888775311 2211 11112223333443 2332211111
Q ss_pred CCccccCcccccEEEEeccccccccCcCCceeeeecCcee-eccCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEeecCC
Q 022014 112 ISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTY-YQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISP 190 (304)
Q Consensus 112 ~~~~a~~w~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~-~~~~~~~~ay~~al~t~~~wv~~~~~~~k~~vffRt~SP 190 (304)
+++ -+..-+||+.-|.= .+|+++.+++.. .........|++=+...++.+. ..+..|+|-.+.|
T Consensus 172 l~~----~~~~a~vVV~lGaN-------D~q~~~~gd~~~kf~S~~W~~eY~kRvd~~l~ia~----~~~~~V~WvGmP~ 236 (354)
T COG2845 172 LDK----HPKPAAVVVMLGAN-------DRQDFKVGDVYEKFRSDEWTKEYEKRVDAILKIAH----THKVPVLWVGMPP 236 (354)
T ss_pred HHh----cCCccEEEEEecCC-------CHHhcccCCeeeecCchHHHHHHHHHHHHHHHHhc----ccCCcEEEeeCCC
Confidence 111 11345666666642 233443333221 2334566789998888887653 3467899988764
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHHHhcCCCeEEeecc
Q 022014 191 THYNPSEWSAGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDIT 250 (304)
Q Consensus 191 ~Hf~gg~W~~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdIt 250 (304)
-- .........-.|++.+++.++.| =+++||.
T Consensus 237 ~r--------------------------~~~l~~dm~~ln~iy~~~vE~~~--gk~i~i~ 268 (354)
T COG2845 237 FR--------------------------KKKLNADMVYLNKIYSKAVEKLG--GKFIDIW 268 (354)
T ss_pred cc--------------------------ccccchHHHHHHHHHHHHHHHhC--CeEEEec
Confidence 33 11222222234777777777765 3678887
No 5
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=75.35 E-value=1.5 Score=37.14 Aligned_cols=15 Identities=27% Similarity=0.660 Sum_probs=13.9
Q ss_pred CCeEEEEeccchhhH
Q 022014 36 GKTVMFVGDSLGLNQ 50 (304)
Q Consensus 36 gK~l~FVGDSl~Rnq 50 (304)
||+|+++|||++...
T Consensus 1 ~~~v~~~GDSit~g~ 15 (191)
T cd01834 1 GDRIVFIGNSITDRG 15 (191)
T ss_pred CCEEEEeCCChhhcc
Confidence 799999999999976
No 6
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=68.67 E-value=3.5 Score=35.50 Aligned_cols=94 Identities=7% Similarity=-0.019 Sum_probs=54.0
Q ss_pred cccEEEEeccccccccCcCCceeeeecCc-eeeccCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEeecCCCCCCCCCCC
Q 022014 121 NADVLSFNTGHWWSHEGSLQGWDYMESMG-TYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWS 199 (304)
Q Consensus 121 ~~DvlV~ntGhWw~~~~~~~~~~~~~~g~-~~~~~~~~~~ay~~al~t~~~wv~~~~~~~k~~vffRt~SP~Hf~gg~W~ 199 (304)
..|++|+..|..=.... ...++ .....-...+.|+..++.+++.+.+ ...+|++-+..|.+-.
T Consensus 59 ~pd~vii~~G~ND~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~lv~~~~~----~~~~vili~~pp~~~~----- 122 (200)
T cd01829 59 KPDVVVVFLGANDRQDI-------RDGDGYLKFGSPEWEEEYRQRIDELLNVARA----KGVPVIWVGLPAMRSP----- 122 (200)
T ss_pred CCCEEEEEecCCCCccc-------cCCCceeecCChhHHHHHHHHHHHHHHHHHh----CCCcEEEEcCCCCCCh-----
Confidence 57999999998843111 00100 0001112346888888888776542 2557888887775410
Q ss_pred CCCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHHHhcCCCeEEeeccccc
Q 022014 200 AGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLS 253 (304)
Q Consensus 200 ~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdIt~ls 253 (304)
.+. ......++++++++++.+ +.++|++.+.
T Consensus 123 ---------~~~------------~~~~~~~~~~~~~a~~~~--~~~id~~~~~ 153 (200)
T cd01829 123 ---------KLS------------ADMVYLNSLYREEVAKAG--GEFVDVWDGF 153 (200)
T ss_pred ---------hHh------------HHHHHHHHHHHHHHHHcC--CEEEEhhHhh
Confidence 110 011234667777776654 8999998764
No 7
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=66.28 E-value=26 Score=29.28 Aligned_cols=71 Identities=10% Similarity=0.130 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCceEEEeecCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHH
Q 022014 158 LVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVI 237 (304)
Q Consensus 158 ~~ay~~al~t~~~wv~~~~~~~k~~vffRt~SP~Hf~gg~W~~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~ 237 (304)
.+.|+..++++++-+.+.. ..++|++-+..|...+. .+. ... .......+++++++.
T Consensus 70 ~~~~~~~~~~l~~~~~~~~--p~~~vi~~~~~p~~~~~-------------~~~----~~~----~~~~~~~n~~l~~~a 126 (174)
T cd01841 70 SNQFIKWYRDIIEQIREEF--PNTKIYLLSVLPVLEED-------------EIK----TRS----NTRIQRLNDAIKELA 126 (174)
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCEEEEEeeCCcCccc-------------ccc----cCC----HHHHHHHHHHHHHHH
Confidence 3567888888887775432 35678998888765311 010 000 001123466777766
Q ss_pred HhcCCCeEEeeccccc
Q 022014 238 RDMHSPAYLLDITMLS 253 (304)
Q Consensus 238 ~~~~~~v~lLdIt~ls 253 (304)
++.+ +.++|+..+.
T Consensus 127 ~~~~--~~~id~~~~~ 140 (174)
T cd01841 127 PELG--VTFIDLNDVL 140 (174)
T ss_pred HHCC--CEEEEcHHHH
Confidence 6654 8999998764
No 8
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=65.32 E-value=3 Score=35.14 Aligned_cols=13 Identities=46% Similarity=0.728 Sum_probs=11.6
Q ss_pred CeEEEEeccchhh
Q 022014 37 KTVMFVGDSLGLN 49 (304)
Q Consensus 37 K~l~FVGDSl~Rn 49 (304)
|+|+|+|||++..
T Consensus 1 ~~iv~~GdS~t~~ 13 (174)
T cd01841 1 KNIVFIGDSLFEG 13 (174)
T ss_pred CCEEEEcchhhhc
Confidence 7899999999974
No 9
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=63.32 E-value=5.9 Score=33.89 Aligned_cols=26 Identities=31% Similarity=0.336 Sum_probs=22.7
Q ss_pred cCCeEEEEeccchhhHHHHHHHHhhcc
Q 022014 35 KGKTVMFVGDSLGLNQWESLICMIHAA 61 (304)
Q Consensus 35 rgK~l~FVGDSl~Rnq~~SLlClL~~~ 61 (304)
.|++|+|||| ..-|-..||+.++..-
T Consensus 1 ~gl~i~~vGD-~~~rv~~Sl~~~~~~~ 26 (158)
T PF00185_consen 1 KGLKIAYVGD-GHNRVAHSLIELLAKF 26 (158)
T ss_dssp TTEEEEEESS-TTSHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CCChHHHHHHHHHHHc
Confidence 4899999999 6678999999999864
No 10
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=61.95 E-value=44 Score=28.16 Aligned_cols=104 Identities=14% Similarity=0.164 Sum_probs=56.5
Q ss_pred cccEEEEeccccccccCcCCceeeeecCceeeccCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEeecCCCCCCCCCCCC
Q 022014 121 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSA 200 (304)
Q Consensus 121 ~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~k~~vffRt~SP~Hf~gg~W~~ 200 (304)
..|+|||+.|.==. .... ....+.|+..++.+++.+.+.- .++.+++.|..|.....
T Consensus 67 ~pd~Vii~~G~ND~----------~~~~------~~~~~~~~~~l~~li~~i~~~~--~~~~iil~t~~p~~~~~----- 123 (188)
T cd01827 67 NPNIVIIKLGTNDA----------KPQN------WKYKDDFKKDYETMIDSFQALP--SKPKIYICYPIPAYYGD----- 123 (188)
T ss_pred CCCEEEEEcccCCC----------CCCC------CccHHHHHHHHHHHHHHHHHHC--CCCeEEEEeCCcccccC-----
Confidence 46999999885310 1000 0113578888888888775432 35578888877754211
Q ss_pred CCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHHHhcCCCeEEeecccccc----cccCC-CCCCCC
Q 022014 201 GSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSE----LRKDG-HPSIYS 265 (304)
Q Consensus 201 ~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdIt~ls~----~R~Dg-Hp~~y~ 265 (304)
.. +....+ .....++.++++.++. .+.++|+..... +-+|| ||+..+
T Consensus 124 -------~~------~~~~~~---~~~~~~~~~~~~a~~~--~~~~vD~~~~~~~~~~~~~Dg~Hpn~~G 175 (188)
T cd01827 124 -------GG------FINDNI---IKKEIQPMIDKIAKKL--NLKLIDLHTPLKGKPELVPDWVHPNEKG 175 (188)
T ss_pred -------CC------ccchHH---HHHHHHHHHHHHHHHc--CCcEEEccccccCCccccCCCCCcCHHH
Confidence 01 110000 0012355666666554 478888876543 33577 877544
No 11
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=61.12 E-value=25 Score=29.72 Aligned_cols=30 Identities=10% Similarity=0.065 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCceEEEeecCCC
Q 022014 160 ALEKGLRTWANWVDNNIDRSKTRVFFQSISPT 191 (304)
Q Consensus 160 ay~~al~t~~~wv~~~~~~~k~~vffRt~SP~ 191 (304)
.|...++.+++.+.+.. ..+.+++-+..|.
T Consensus 75 ~~~~~~~~~i~~i~~~~--p~~~iil~~~~~~ 104 (177)
T cd01844 75 MVRERLGPLVKGLRETH--PDTPILLVSPRYC 104 (177)
T ss_pred HHHHHHHHHHHHHHHHC--cCCCEEEEecCCC
Confidence 57778888888776543 2456888776554
No 12
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=55.34 E-value=5.2 Score=33.84 Aligned_cols=73 Identities=8% Similarity=0.079 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCceEEEeecCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHH
Q 022014 158 LVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVI 237 (304)
Q Consensus 158 ~~ay~~al~t~~~wv~~~~~~~k~~vffRt~SP~Hf~gg~W~~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~ 237 (304)
.+.|+..++.+++.+.+.. .+.+|++.+..|.-+.. ..|..+. .......++.++++.
T Consensus 76 ~~~~~~~~~~li~~i~~~~--~~~~iv~~~~~~~~~~~------------~~~~~~~--------~~~~~~~~~~~~~~a 133 (189)
T cd01825 76 ASEYRQQLREFIKRLRQIL--PNASILLVGPPDSLQKT------------GAGRWRT--------PPGLDAVIAAQRRVA 133 (189)
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCeEEEEcCCchhccC------------CCCCccc--------CCcHHHHHHHHHHHH
Confidence 3578899999888876432 36779998877643211 1121110 011123466677777
Q ss_pred HhcCCCeEEeecccccc
Q 022014 238 RDMHSPAYLLDITMLSE 254 (304)
Q Consensus 238 ~~~~~~v~lLdIt~ls~ 254 (304)
++.+ +.++|+...+.
T Consensus 134 ~~~~--v~~vd~~~~~~ 148 (189)
T cd01825 134 KEEG--IAFWDLYAAMG 148 (189)
T ss_pred HHcC--CeEEeHHHHhC
Confidence 6655 89999987654
No 13
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=54.59 E-value=69 Score=26.14 Aligned_cols=98 Identities=19% Similarity=0.256 Sum_probs=57.9
Q ss_pred cccEEEEeccccccccCcCCceeeeecCceeeccCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEeecCCCCCCCCCCCC
Q 022014 121 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSA 200 (304)
Q Consensus 121 ~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~k~~vffRt~SP~Hf~gg~W~~ 200 (304)
.+|++|++.|.= +... + .+ .+.|+..++++++.+.+.. .+..+++-+..|.-..
T Consensus 40 ~pd~vvi~~G~N----------D~~~-~------~~-~~~~~~~~~~~i~~i~~~~--p~~~ii~~~~~p~~~~------ 93 (157)
T cd01833 40 KPDVVLLHLGTN----------DLVL-N------RD-PDTAPDRLRALIDQMRAAN--PDVKIIVATLIPTTDA------ 93 (157)
T ss_pred CCCEEEEeccCc----------cccc-C------CC-HHHHHHHHHHHHHHHHHhC--CCeEEEEEeCCCCCCc------
Confidence 579999988753 1111 1 12 3578888888888775432 3556777766553210
Q ss_pred CCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHHHhc---CCCeEEeeccccc---ccccCC-CCCCC
Q 022014 201 GSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDM---HSPAYLLDITMLS---ELRKDG-HPSIY 264 (304)
Q Consensus 201 ~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~lLdIt~ls---~~R~Dg-Hp~~y 264 (304)
.. .......++.+++++++. +..+.++|+.... .+.+|| ||+.-
T Consensus 94 --------~~------------~~~~~~~n~~l~~~~~~~~~~~~~v~~vd~~~~~~~~~~~~Dg~Hpn~~ 144 (157)
T cd01833 94 --------SG------------NARIAEYNAAIPGVVADLRTAGSPVVLVDMSTGYTTADDLYDGLHPNDQ 144 (157)
T ss_pred --------ch------------hHHHHHHHHHHHHHHHHHhcCCCCEEEEecCCCCCCcccccCCCCCchH
Confidence 00 001123466666666543 3579999998886 467777 77654
No 14
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=53.52 E-value=6.8 Score=33.59 Aligned_cols=92 Identities=14% Similarity=0.045 Sum_probs=47.6
Q ss_pred ccccEEEEeccccccccCcCCceeeeecCceeeccCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEeecCCCCCCCCCCC
Q 022014 120 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWS 199 (304)
Q Consensus 120 ~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~k~~vffRt~SP~Hf~gg~W~ 199 (304)
.+.|+||+..|.= . ....++. .... ..+.|+..++.+++.+.+ +..|++-+..|.- +
T Consensus 68 ~~pd~V~i~~G~N----D------~~~~~~~-~~~~-~~~~~~~~~~~ii~~~~~-----~~~vi~~~~~p~~----~-- 124 (193)
T cd01835 68 NVPNRLVLSVGLN----D------TARGGRK-RPQL-SARAFLFGLNQLLEEAKR-----LVPVLVVGPTPVD----E-- 124 (193)
T ss_pred CCCCEEEEEecCc----c------cccccCc-cccc-CHHHHHHHHHHHHHHHhc-----CCcEEEEeCCCcc----c--
Confidence 3579999998853 1 0101000 0111 245788888887765432 3457777765531 0
Q ss_pred CCCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHHHhcCCCeEEeeccccc
Q 022014 200 AGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLS 253 (304)
Q Consensus 200 ~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdIt~ls 253 (304)
...|... ......++.++++.++. .+.++|+....
T Consensus 125 -------------~~~~~~~----~~~~~~n~~~~~~a~~~--~~~~vd~~~~~ 159 (193)
T cd01835 125 -------------AKMPYSN----RRIARLETAFAEVCLRR--DVPFLDTFTPL 159 (193)
T ss_pred -------------cccchhh----HHHHHHHHHHHHHHHHc--CCCeEeCccch
Confidence 0112110 00112456666666664 48899987643
No 15
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=52.83 E-value=6.8 Score=33.29 Aligned_cols=13 Identities=23% Similarity=0.401 Sum_probs=11.3
Q ss_pred eEEEEeccchhhH
Q 022014 38 TVMFVGDSLGLNQ 50 (304)
Q Consensus 38 ~l~FVGDSl~Rnq 50 (304)
||+|+||||+...
T Consensus 1 ~iv~~GDSit~G~ 13 (177)
T cd01844 1 PWVFYGTSISQGA 13 (177)
T ss_pred CEEEEeCchhcCc
Confidence 6899999999864
No 16
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=51.52 E-value=6.7 Score=33.28 Aligned_cols=57 Identities=18% Similarity=0.184 Sum_probs=35.1
Q ss_pred cccEEEEeccccccccCcCCceeeeecCceeeccCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEeecCCCC
Q 022014 121 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTH 192 (304)
Q Consensus 121 ~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~k~~vffRt~SP~H 192 (304)
.+|++|+..|.-=... .+.. ...+ .+.|+..++.+++-+.+.. ....|++-|..|..
T Consensus 63 ~pd~vii~~G~ND~~~----------~~~~--~~~~-~~~~~~~~~~~i~~~~~~~--~~~~ii~~t~~~~~ 119 (199)
T cd01838 63 QPDLVTIFFGANDAAL----------PGQP--QHVP-LDEYKENLRKIVSHLKSLS--PKTKVILITPPPVD 119 (199)
T ss_pred CceEEEEEecCccccC----------CCCC--Cccc-HHHHHHHHHHHHHHHHhhC--CCCeEEEeCCCCCC
Confidence 6899999988652111 0100 0112 4688888988888775422 35678888877743
No 17
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=50.24 E-value=6.9 Score=33.11 Aligned_cols=70 Identities=16% Similarity=0.097 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCceEEEeecCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHH
Q 022014 158 LVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVI 237 (304)
Q Consensus 158 ~~ay~~al~t~~~wv~~~~~~~k~~vffRt~SP~Hf~gg~W~~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~ 237 (304)
.+.|+..++++++.+. .....|++-|..|.- . ..|+.... .......+++++++.
T Consensus 87 ~~~~~~~~~~~i~~i~----~~~~~vil~~~~~~~----~----------------~~~~~~~~-~~~~~~~n~~l~~~a 141 (185)
T cd01832 87 PDTYRADLEEAVRRLR----AAGARVVVFTIPDPA----V----------------LEPFRRRV-RARLAAYNAVIRAVA 141 (185)
T ss_pred HHHHHHHHHHHHHHHH----hCCCEEEEecCCCcc----c----------------cchhHHHH-HHHHHHHHHHHHHHH
Confidence 3578888888887765 234568887765541 0 01211000 000112466677776
Q ss_pred HhcCCCeEEeecccccc
Q 022014 238 RDMHSPAYLLDITMLSE 254 (304)
Q Consensus 238 ~~~~~~v~lLdIt~ls~ 254 (304)
++.+ +.++|+..+..
T Consensus 142 ~~~~--v~~vd~~~~~~ 156 (185)
T cd01832 142 ARYG--AVHVDLWEHPE 156 (185)
T ss_pred HHcC--CEEEecccCcc
Confidence 6654 89999987654
No 18
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=47.75 E-value=14 Score=35.19 Aligned_cols=26 Identities=23% Similarity=0.227 Sum_probs=22.0
Q ss_pred hcCCeEEEEeccchhhHHHHHHHHhhcc
Q 022014 34 MKGKTVMFVGDSLGLNQWESLICMIHAA 61 (304)
Q Consensus 34 lrgK~l~FVGDSl~Rnq~~SLlClL~~~ 61 (304)
+.|++|+||||. .|-..|++.++..-
T Consensus 145 l~g~kva~vGD~--~~v~~S~~~~~~~~ 170 (302)
T PRK14805 145 VSKVKLAYVGDG--NNVTHSLMYGAAIL 170 (302)
T ss_pred cCCcEEEEEcCC--CccHHHHHHHHHHc
Confidence 688999999994 57889999998753
No 19
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=46.04 E-value=11 Score=32.02 Aligned_cols=13 Identities=31% Similarity=0.399 Sum_probs=10.6
Q ss_pred eEEEEeccchhhH
Q 022014 38 TVMFVGDSLGLNQ 50 (304)
Q Consensus 38 ~l~FVGDSl~Rnq 50 (304)
||+|+|||++..-
T Consensus 2 ~i~~~GDSit~G~ 14 (188)
T cd01827 2 KVACVGNSITEGA 14 (188)
T ss_pred eEEEEeccccccc
Confidence 6999999996643
No 20
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=45.15 E-value=11 Score=31.46 Aligned_cols=46 Identities=11% Similarity=0.067 Sum_probs=28.5
Q ss_pred cccEEEEeccccccccCcCCceeeeecCceeeccCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEeec
Q 022014 121 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSI 188 (304)
Q Consensus 121 ~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~k~~vffRt~ 188 (304)
..|++|+..|.-= .. .+ .+ .+.|+..++.+++-+.+. ..++++-+.
T Consensus 64 ~pd~v~i~~G~ND----------~~-~~------~~-~~~~~~~l~~li~~~~~~----~~~vil~~~ 109 (177)
T cd01822 64 KPDLVILELGGND----------GL-RG------IP-PDQTRANLRQMIETAQAR----GAPVLLVGM 109 (177)
T ss_pred CCCEEEEeccCcc----------cc-cC------CC-HHHHHHHHHHHHHHHHHC----CCeEEEEec
Confidence 5799999998541 00 00 11 356888888888766542 456777665
No 21
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=44.75 E-value=12 Score=32.41 Aligned_cols=15 Identities=33% Similarity=0.585 Sum_probs=13.0
Q ss_pred CCeEEEEeccchhhH
Q 022014 36 GKTVMFVGDSLGLNQ 50 (304)
Q Consensus 36 gK~l~FVGDSl~Rnq 50 (304)
+.+|+|+|||++...
T Consensus 10 ~~~iv~~GDSit~G~ 24 (191)
T PRK10528 10 ADTLLILGDSLSAGY 24 (191)
T ss_pred CCEEEEEeCchhhcC
Confidence 679999999998764
No 22
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=44.54 E-value=11 Score=31.70 Aligned_cols=28 Identities=0% Similarity=-0.015 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCceEEEee
Q 022014 158 LVALEKGLRTWANWVDNNIDRSKTRVFFQS 187 (304)
Q Consensus 158 ~~ay~~al~t~~~wv~~~~~~~k~~vffRt 187 (304)
...|+..++.+++-+.+.. .+..+++-+
T Consensus 76 ~~~~~~~~~~li~~i~~~~--p~~~i~~~~ 103 (169)
T cd01831 76 GEDFTNAYVEFIEELRKRY--PDAPIVLML 103 (169)
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCeEEEEe
Confidence 3567778877777665432 244566654
No 23
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=44.07 E-value=20 Score=28.57 Aligned_cols=22 Identities=18% Similarity=0.206 Sum_probs=18.1
Q ss_pred HHHHHHHhcCCeEEEEeccchh
Q 022014 27 GLEFLVKMKGKTVMFVGDSLGL 48 (304)
Q Consensus 27 ~~~fl~~lrgK~l~FVGDSl~R 48 (304)
=+++++..-+++.++||||=..
T Consensus 55 i~~i~~~fP~~kfiLIGDsgq~ 76 (100)
T PF09949_consen 55 IERILRDFPERKFILIGDSGQH 76 (100)
T ss_pred HHHHHHHCCCCcEEEEeeCCCc
Confidence 3567888899999999999654
No 24
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=42.47 E-value=17 Score=31.95 Aligned_cols=32 Identities=6% Similarity=0.306 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCceEEEeecCCCC
Q 022014 159 VALEKGLRTWANWVDNNIDRSKTRVFFQSISPTH 192 (304)
Q Consensus 159 ~ay~~al~t~~~wv~~~~~~~k~~vffRt~SP~H 192 (304)
+.|...++.+++-+.+.. ..+.|++-+..|..
T Consensus 109 ~~~~~~l~~ii~~l~~~~--P~~~Iil~~~~p~~ 140 (214)
T cd01820 109 EEIAEGILAIVEEIREKL--PNAKILLLGLLPRG 140 (214)
T ss_pred HHHHHHHHHHHHHHHHHC--CCCeEEEEeccCCC
Confidence 456777887777665432 24567887876643
No 25
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=37.35 E-value=18 Score=30.76 Aligned_cols=51 Identities=16% Similarity=0.199 Sum_probs=31.8
Q ss_pred cccEEEEeccccccccCcCCceeeeecCceeeccCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEeecCCC
Q 022014 121 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPT 191 (304)
Q Consensus 121 ~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~k~~vffRt~SP~ 191 (304)
..|++||+.|-==. .. + .+ .+.|+..++++++-+.+.. ..+.||+-+..|.
T Consensus 67 ~pd~Vii~~G~ND~----------~~-~------~~-~~~~~~~l~~li~~i~~~~--~~~~iiv~~~p~~ 117 (191)
T cd01836 67 RFDVAVISIGVNDV----------TH-L------TS-IARWRKQLAELVDALRAKF--PGARVVVTAVPPL 117 (191)
T ss_pred CCCEEEEEecccCc----------CC-C------CC-HHHHHHHHHHHHHHHHhhC--CCCEEEEECCCCc
Confidence 57999998775211 00 0 11 3578888888888776432 2467888776554
No 26
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=37.10 E-value=12 Score=29.90 Aligned_cols=56 Identities=11% Similarity=0.106 Sum_probs=32.5
Q ss_pred cccccEEEEeccccccccCcCCceeeeecCceeeccCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEeecCCCC
Q 022014 119 WLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTH 192 (304)
Q Consensus 119 w~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~k~~vffRt~SP~H 192 (304)
-...|++|+..|..-..... ......|...++..++.+.+ ......|++-+..|..
T Consensus 63 ~~~~d~vil~~G~ND~~~~~----------------~~~~~~~~~~~~~~i~~~~~--~~~~~~vv~~~~~~~~ 118 (187)
T cd00229 63 KDKPDLVIIELGTNDLGRGG----------------DTSIDEFKANLEELLDALRE--RAPGAKVILITPPPPP 118 (187)
T ss_pred cCCCCEEEEEeccccccccc----------------ccCHHHHHHHHHHHHHHHHH--HCCCCcEEEEeCCCCC
Confidence 34689999999988542110 01234566666666666654 1235567776665543
No 27
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=36.85 E-value=17 Score=30.67 Aligned_cols=91 Identities=13% Similarity=0.114 Sum_probs=49.7
Q ss_pred cccEEEEeccccccccCcCCceeeeecCceeeccCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEeecCCCCCCCCCCCC
Q 022014 121 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSA 200 (304)
Q Consensus 121 ~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~k~~vffRt~SP~Hf~gg~W~~ 200 (304)
..|++|++.|.-=. . .+ .+ .+.|.+.++.+++.+.+ ....+++.+..|.-- ..|..
T Consensus 59 ~~d~v~i~~G~ND~----------~-~~------~~-~~~~~~~~~~li~~~~~----~~~~~il~~~~p~~~--~~~~~ 114 (183)
T cd04501 59 KPAVVIIMGGTNDI----------I-VN------TS-LEMIKDNIRSMVELAEA----NGIKVILASPLPVDD--YPWKP 114 (183)
T ss_pred CCCEEEEEeccCcc----------c-cC------CC-HHHHHHHHHHHHHHHHH----CCCcEEEEeCCCcCc--cccch
Confidence 46999999887611 0 01 11 35788888888887743 234677777666321 01110
Q ss_pred CCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHHHhcCCCeEEeecccccc
Q 022014 201 GSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSE 254 (304)
Q Consensus 201 ~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdIt~ls~ 254 (304)
....| .......++.++++.++. .+.++|+.....
T Consensus 115 -----~~~~~------------~~~~~~~n~~~~~~a~~~--~v~~vd~~~~~~ 149 (183)
T cd04501 115 -----QWLRP------------ANKLKSLNRWLKDYAREN--GLLFLDFYSPLL 149 (183)
T ss_pred -----hhcch------------HHHHHHHHHHHHHHHHHc--CCCEEechhhhh
Confidence 00001 001122466666666654 489999987643
No 28
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=36.73 E-value=18 Score=31.48 Aligned_cols=86 Identities=12% Similarity=0.180 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHhhcC---CCCceEEEeecCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHH
Q 022014 159 VALEKGLRTWANWVDNNID---RSKTRVFFQSISPTHYNPSEWSAGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDA 235 (304)
Q Consensus 159 ~ay~~al~t~~~wv~~~~~---~~k~~vffRt~SP~Hf~gg~W~~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~ 235 (304)
+.|+..++++++-+.+... ...++|++-+-.|- ... .+.. ..+..+.. ......++++++
T Consensus 101 ~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~-~~~-~~~~-------~~~~~~~~--------~~~~~~~~~~~~ 163 (208)
T cd01839 101 AEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPI-RTP-KGSL-------AGKFAGAE--------EKSKGLADAYRA 163 (208)
T ss_pred HHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCcc-Ccc-ccch-------hhhhccHH--------HHHHHHHHHHHH
Confidence 5788888888887764321 13566788776554 110 0000 01110000 001124566777
Q ss_pred HHHhcCCCeEEeeccccc-ccccCC-CCCC
Q 022014 236 VIRDMHSPAYLLDITMLS-ELRKDG-HPSI 263 (304)
Q Consensus 236 ~~~~~~~~v~lLdIt~ls-~~R~Dg-Hp~~ 263 (304)
++++.+ +.++|+..+. .+-+|| ||+.
T Consensus 164 ~a~~~~--~~~iD~~~~~~~~~~DGvH~~~ 191 (208)
T cd01839 164 LAEELG--CHFFDAGSVGSTSPVDGVHLDA 191 (208)
T ss_pred HHHHhC--CCEEcHHHHhccCCCCccCcCH
Confidence 776654 7889986543 233455 6554
No 29
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=35.47 E-value=19 Score=31.35 Aligned_cols=31 Identities=19% Similarity=0.213 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCceEEEeecCCCC
Q 022014 158 LVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTH 192 (304)
Q Consensus 158 ~~ay~~al~t~~~wv~~~~~~~k~~vffRt~SP~H 192 (304)
.+.|+..++++++.+.++ ..+|++-|..|..
T Consensus 101 ~~~~~~~l~~ii~~~~~~----~~~vil~t~~P~~ 131 (204)
T cd01830 101 AEELIAGYRQLIRRAHAR----GIKVIGATITPFE 131 (204)
T ss_pred HHHHHHHHHHHHHHHHHC----CCeEEEecCCCCC
Confidence 457888898888766542 4578888887744
No 30
>PLN02342 ornithine carbamoyltransferase
Probab=33.57 E-value=35 Score=33.28 Aligned_cols=25 Identities=28% Similarity=0.492 Sum_probs=21.7
Q ss_pred hcCCeEEEEeccchhhHHHHHHHHhhc
Q 022014 34 MKGKTVMFVGDSLGLNQWESLICMIHA 60 (304)
Q Consensus 34 lrgK~l~FVGDSl~Rnq~~SLlClL~~ 60 (304)
+.|++|+||||- .|-..||+.++..
T Consensus 192 l~glkva~vGD~--~nva~Sli~~~~~ 216 (348)
T PLN02342 192 LEGTKVVYVGDG--NNIVHSWLLLAAV 216 (348)
T ss_pred cCCCEEEEECCC--chhHHHHHHHHHH
Confidence 689999999994 4699999999875
No 31
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=32.81 E-value=33 Score=32.84 Aligned_cols=22 Identities=36% Similarity=0.536 Sum_probs=18.7
Q ss_pred hcCCeEEEEeccchhhHHHHHHHH
Q 022014 34 MKGKTVMFVGDSLGLNQWESLICM 57 (304)
Q Consensus 34 lrgK~l~FVGDSl~Rnq~~SLlCl 57 (304)
++|++++||||- -|.-.||+=.
T Consensus 151 l~g~k~a~vGDg--NNv~nSl~~~ 172 (310)
T COG0078 151 LKGLKLAYVGDG--NNVANSLLLA 172 (310)
T ss_pred ccCcEEEEEcCc--chHHHHHHHH
Confidence 699999999999 7888888643
No 32
>PF12026 DUF3513: Domain of unknown function (DUF3513); InterPro: IPR021901 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is typically between 192 to 218 amino acids in length. This domain is found associated with PF00018 from PFAM, PF08824 from PFAM. This domain has a conserved QPP sequence motif. ; PDB: 3T6G_D 1X27_N.
Probab=32.35 E-value=2.6 Score=38.16 Aligned_cols=18 Identities=28% Similarity=0.600 Sum_probs=15.1
Q ss_pred HHhcCCeEEEEeccchhh
Q 022014 32 VKMKGKTVMFVGDSLGLN 49 (304)
Q Consensus 32 ~~lrgK~l~FVGDSl~Rn 49 (304)
-.|-|.+++||||+|.|+
T Consensus 130 VIl~ahkLVfiGDTl~r~ 147 (210)
T PF12026_consen 130 VILSAHKLVFIGDTLCRE 147 (210)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred EEEEeeeeeeeccHHHHH
Confidence 356788899999999985
No 33
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=32.22 E-value=20 Score=29.84 Aligned_cols=87 Identities=11% Similarity=0.068 Sum_probs=51.4
Q ss_pred cccEEEEeccccccccCcCCceeeeecCceeeccCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEeecCCCCCCCCCCCC
Q 022014 121 NADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSA 200 (304)
Q Consensus 121 ~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~k~~vffRt~SP~Hf~gg~W~~ 200 (304)
..|++|+..|.= . .. .+ .+ .+.|++.++.+++.+.+.. ....|++.+..|..-.
T Consensus 48 ~pd~vvl~~G~N---D-------~~-~~------~~-~~~~~~~l~~li~~~~~~~--~~~~vi~~~~~p~~~~------ 101 (169)
T cd01828 48 QPKAIFIMIGIN---D-------LA-QG------TS-DEDIVANYRTILEKLRKHF--PNIKIVVQSILPVGEL------ 101 (169)
T ss_pred CCCEEEEEeecc---C-------CC-CC------CC-HHHHHHHHHHHHHHHHHHC--CCCeEEEEecCCcCcc------
Confidence 469999998832 1 00 11 12 3678888988888776432 3567999988775500
Q ss_pred CCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHHHhcCCCeEEeeccccc
Q 022014 201 GSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLS 253 (304)
Q Consensus 201 ~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdIt~ls 253 (304)
.... . ......++.++++.++ .++.++|+....
T Consensus 102 ------~~~~----~--------~~~~~~n~~l~~~a~~--~~~~~id~~~~~ 134 (169)
T cd01828 102 ------KSIP----N--------EQIEELNRQLAQLAQQ--EGVTFLDLWAVF 134 (169)
T ss_pred ------CcCC----H--------HHHHHHHHHHHHHHHH--CCCEEEechhhh
Confidence 0000 0 0012346667776664 458999988654
No 34
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=30.46 E-value=42 Score=32.38 Aligned_cols=26 Identities=23% Similarity=0.231 Sum_probs=21.8
Q ss_pred hcCCeEEEEeccchhhHHHHHHHHhhc
Q 022014 34 MKGKTVMFVGDSLGLNQWESLICMIHA 60 (304)
Q Consensus 34 lrgK~l~FVGDSl~Rnq~~SLlClL~~ 60 (304)
+.|++|+||||..+ |-..|++=++..
T Consensus 153 l~g~kia~vGD~~~-~v~~Sl~~~~~~ 178 (332)
T PRK04284 153 YKDIKFTYVGDGRN-NVANALMQGAAI 178 (332)
T ss_pred cCCcEEEEecCCCc-chHHHHHHHHHH
Confidence 67999999999755 588899888774
No 35
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=29.97 E-value=27 Score=30.04 Aligned_cols=93 Identities=11% Similarity=0.070 Sum_probs=52.4
Q ss_pred ccccEEEEeccccccccCcCCceeeeecCceeeccCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEeecCCCCCCCCCCC
Q 022014 120 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWS 199 (304)
Q Consensus 120 ~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~k~~vffRt~SP~Hf~gg~W~ 199 (304)
...|+||+..|.-=.... ... ...+ .+.|+..|+++++-+.+. ...+++-|..|.- .|.
T Consensus 64 ~~pdlVii~~G~ND~~~~---------~~~---~~~~-~~~~~~nl~~ii~~~~~~----~~~~il~tp~~~~----~~~ 122 (198)
T cd01821 64 KPGDYVLIQFGHNDQKPK---------DPE---YTEP-YTTYKEYLRRYIAEARAK----GATPILVTPVTRR----TFD 122 (198)
T ss_pred CCCCEEEEECCCCCCCCC---------CCC---CCCc-HHHHHHHHHHHHHHHHHC----CCeEEEECCcccc----ccC
Confidence 368999999997522110 000 0112 467899999988876532 3456776554421 122
Q ss_pred CCCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHHHhcCCCeEEeeccccc
Q 022014 200 AGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLS 253 (304)
Q Consensus 200 ~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdIt~ls 253 (304)
. + . . ........+++++++.++.+ +.++|+..+.
T Consensus 123 ~---------~-~---~-----~~~~~~~~~~~~~~~a~~~~--~~~vD~~~~~ 156 (198)
T cd01821 123 E---------G-G---K-----VEDTLGDYPAAMRELAAEEG--VPLIDLNAAS 156 (198)
T ss_pred C---------C-C---c-----ccccchhHHHHHHHHHHHhC--CCEEecHHHH
Confidence 1 1 0 0 00112345788888887766 7789987754
No 36
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=28.30 E-value=49 Score=31.96 Aligned_cols=26 Identities=31% Similarity=0.382 Sum_probs=22.1
Q ss_pred hcCCeEEEEeccchhhHHHHHHHHhhc
Q 022014 34 MKGKTVMFVGDSLGLNQWESLICMIHA 60 (304)
Q Consensus 34 lrgK~l~FVGDSl~Rnq~~SLlClL~~ 60 (304)
+.|++|+||||.-+ |-..||+-++..
T Consensus 153 l~g~~va~vGd~~~-~v~~Sl~~~~~~ 178 (331)
T PRK02102 153 LKGLKLAYVGDGRN-NMANSLMVGGAK 178 (331)
T ss_pred CCCCEEEEECCCcc-cHHHHHHHHHHH
Confidence 67899999999854 599999998874
No 37
>PRK03515 ornithine carbamoyltransferase subunit I; Provisional
Probab=27.95 E-value=47 Score=32.14 Aligned_cols=26 Identities=23% Similarity=0.253 Sum_probs=20.9
Q ss_pred hcCCeEEEEeccchhhHHHHHHHHhhc
Q 022014 34 MKGKTVMFVGDSLGLNQWESLICMIHA 60 (304)
Q Consensus 34 lrgK~l~FVGDSl~Rnq~~SLlClL~~ 60 (304)
+.|++|+||||- ..|-..||+=++..
T Consensus 154 l~g~~ia~vGD~-~~~v~~Sl~~~~~~ 179 (336)
T PRK03515 154 FNEMTLAYAGDA-RNNMGNSLLEAAAL 179 (336)
T ss_pred cCCCEEEEeCCC-cCcHHHHHHHHHHH
Confidence 568999999994 33689999888764
No 38
>cd00885 cinA Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, where the domain is presumed to bind molybdopterin.
Probab=26.76 E-value=47 Score=28.77 Aligned_cols=21 Identities=24% Similarity=0.471 Sum_probs=17.7
Q ss_pred CCcccccCCCchhHHHHHHHH
Q 022014 280 ADCSHWCLPGLPDTWNQLLYT 300 (304)
Q Consensus 280 ~DC~HWCLPGv~DtWNelL~~ 300 (304)
++|...||||||..-..+|-+
T Consensus 141 ~~~~i~~lPG~P~e~~~m~~~ 161 (170)
T cd00885 141 NGKNVFLLPGVPSEMKPMLEE 161 (170)
T ss_pred CCeEEEEECCChHHHHHHHHH
Confidence 479999999999988777764
No 39
>PRK03670 competence damage-inducible protein A; Provisional
Probab=26.63 E-value=46 Score=30.89 Aligned_cols=22 Identities=23% Similarity=0.496 Sum_probs=18.6
Q ss_pred CCcccccCCCchhHHHHHHHHH
Q 022014 280 ADCSHWCLPGLPDTWNQLLYTA 301 (304)
Q Consensus 280 ~DC~HWCLPGv~DtWNelL~~~ 301 (304)
..|.++||||||-.+..+|-..
T Consensus 150 ~~~~v~~lPGvP~e~~~M~~~~ 171 (252)
T PRK03670 150 KGTKIFVLPGMPREMKAMLEKE 171 (252)
T ss_pred CCeEEEEeCCChHHHHHHHHHH
Confidence 4689999999999998888663
No 40
>KOG3482 consensus Small nuclear ribonucleoprotein (snRNP) SMF [RNA processing and modification]
Probab=26.54 E-value=57 Score=24.59 Aligned_cols=22 Identities=27% Similarity=0.321 Sum_probs=17.8
Q ss_pred ccCCCCCHHHHHHHhcCCeEEE
Q 022014 20 VCLIRFNGLEFLVKMKGKTVMF 41 (304)
Q Consensus 20 C~Lprfd~~~fl~~lrgK~l~F 41 (304)
|+...-||+-||..|.||++..
T Consensus 2 ~a~~PvNPKpFL~~l~gk~V~v 23 (79)
T KOG3482|consen 2 SAKQPVNPKPFLNGLTGKPVLV 23 (79)
T ss_pred CCcccCCchHHHhhccCCeEEE
Confidence 4555669999999999998753
No 41
>PF06462 Hyd_WA: Propeller; InterPro: IPR006624 Tectonins I and II are two dominant proteins in the nuclei and nuclear matrix from plasmodia of Physarum polycephalum (Slime mold) which encode 217 and 353 amino acids, respectively. Tectonin I is homologous to the C-terminal two-thirds of tectonin II. Both proteins contain six tandem repeats that are each 33-37 amino acids in length and define a new consensus sequence. Homologous repeats are found in L-6, a bacterial lipopolysaccharide-binding lectin from horseshoe crab hemocytes. The repetitive sequences of the tectonins and L-6 are reminiscent of the WD repeats of the beta-subunit of G proteins, suggesting that they form beta-propeller domains. The tectonins may be lectins that function as part of a transmembrane signalling complex during phagocytosis [].
Probab=26.50 E-value=66 Score=20.02 Aligned_cols=22 Identities=32% Similarity=0.726 Sum_probs=17.4
Q ss_pred CCceEEEee-cCCCCCCCCCCCC
Q 022014 179 SKTRVFFQS-ISPTHYNPSEWSA 200 (304)
Q Consensus 179 ~k~~vffRt-~SP~Hf~gg~W~~ 200 (304)
..+.+++|+ .||...+|..|..
T Consensus 8 ~~G~v~~R~Gis~~~P~G~~W~~ 30 (32)
T PF06462_consen 8 SDGSVYFRTGISPSNPEGTSWEH 30 (32)
T ss_pred CCCCEEEECcCCCCCCCCCCcEE
Confidence 467899998 8988888877753
No 42
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=26.30 E-value=31 Score=28.81 Aligned_cols=31 Identities=19% Similarity=0.305 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCceEEEeecCC
Q 022014 158 LVALEKGLRTWANWVDNNIDRSKTRVFFQSISP 190 (304)
Q Consensus 158 ~~ay~~al~t~~~wv~~~~~~~k~~vffRt~SP 190 (304)
.+.|+..++++++-+.+.. .+..+++-+..|
T Consensus 69 ~~~~~~~~~~lv~~i~~~~--~~~~iil~~~~p 99 (171)
T cd04502 69 PEEVLRDFRELVNRIRAKL--PDTPIAIISIKP 99 (171)
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCcEEEEEecC
Confidence 4578888888888775543 245677777655
No 43
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=26.29 E-value=31 Score=28.58 Aligned_cols=25 Identities=4% Similarity=-0.016 Sum_probs=16.8
Q ss_pred HHHHHHHHHHhcCCCeEEeecccccc
Q 022014 229 QMRVVDAVIRDMHSPAYLLDITMLSE 254 (304)
Q Consensus 229 ~~~~~~~~~~~~~~~v~lLdIt~ls~ 254 (304)
.++.+++++++.. .+.++|....+.
T Consensus 97 ~n~~~~~~a~~~~-~v~~id~~~~~~ 121 (150)
T cd01840 97 VNAYLLDAAKKYK-NVTIIDWYKAAK 121 (150)
T ss_pred HHHHHHHHHHHCC-CcEEecHHHHhc
Confidence 4667777766542 599999876543
No 44
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=25.93 E-value=33 Score=29.53 Aligned_cols=29 Identities=7% Similarity=0.177 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCceEEEeec
Q 022014 158 LVALEKGLRTWANWVDNNIDRSKTRVFFQSI 188 (304)
Q Consensus 158 ~~ay~~al~t~~~wv~~~~~~~k~~vffRt~ 188 (304)
.+.|++.|+.+++-+.+. . .+.+|++-++
T Consensus 101 ~~~~~~~l~~~i~~ir~~-~-p~~~Ivv~~~ 129 (204)
T cd04506 101 EETYQNNLKKIFKEIRKL-N-PDAPIFLVGL 129 (204)
T ss_pred HHHHHHHHHHHHHHHHHH-C-CCCeEEEEec
Confidence 457889999988877542 2 2456666654
No 45
>PRK08192 aspartate carbamoyltransferase; Provisional
Probab=25.74 E-value=56 Score=31.65 Aligned_cols=27 Identities=22% Similarity=0.208 Sum_probs=22.0
Q ss_pred hcCCeEEEEeccchhhHHHHHHHHhhc
Q 022014 34 MKGKTVMFVGDSLGLNQWESLICMIHA 60 (304)
Q Consensus 34 lrgK~l~FVGDSl~Rnq~~SLlClL~~ 60 (304)
+.|++|+||||-..-|-.-||+-+|..
T Consensus 157 l~g~kia~vGD~~~~rv~~Sl~~~l~~ 183 (338)
T PRK08192 157 IDGMHIAMVGDLKFGRTVHSLSRLLCM 183 (338)
T ss_pred cCCCEEEEECcCCCCchHHHHHHHHHH
Confidence 688999999997655788998877763
No 46
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=25.56 E-value=58 Score=31.44 Aligned_cols=27 Identities=19% Similarity=0.293 Sum_probs=21.8
Q ss_pred hcCCeEEEEeccchhhHHHHHHHHhhcc
Q 022014 34 MKGKTVMFVGDSLGLNQWESLICMIHAA 61 (304)
Q Consensus 34 lrgK~l~FVGDSl~Rnq~~SLlClL~~~ 61 (304)
+.|++|+||||-.+ |-..||+-++..-
T Consensus 154 l~gl~ia~vGD~~~-~v~~Sl~~~~~~~ 180 (334)
T PRK01713 154 LSEISYVYIGDARN-NMGNSLLLIGAKL 180 (334)
T ss_pred cCCcEEEEECCCcc-CHHHHHHHHHHHc
Confidence 67899999999644 5899999888753
No 47
>PLN02527 aspartate carbamoyltransferase
Probab=24.96 E-value=62 Score=30.84 Aligned_cols=27 Identities=26% Similarity=0.305 Sum_probs=22.1
Q ss_pred hcCCeEEEEeccchhhHHHHHHHHhhc
Q 022014 34 MKGKTVMFVGDSLGLNQWESLICMIHA 60 (304)
Q Consensus 34 lrgK~l~FVGDSl~Rnq~~SLlClL~~ 60 (304)
+.|++|+||||-.+=|-+.||+-++..
T Consensus 149 l~g~kva~vGD~~~~rv~~Sl~~~~~~ 175 (306)
T PLN02527 149 LDGIKVGLVGDLANGRTVRSLAYLLAK 175 (306)
T ss_pred cCCCEEEEECCCCCChhHHHHHHHHHh
Confidence 788999999998754678898877763
No 48
>PF01861 DUF43: Protein of unknown function DUF43; InterPro: IPR002723 This family of prokaryotic proteins have not been characterised. All the members are 350-400 amino acids long.; PDB: 2QM3_A.
Probab=24.31 E-value=37 Score=31.45 Aligned_cols=12 Identities=42% Similarity=1.113 Sum_probs=8.9
Q ss_pred hcCCeEEEEecc
Q 022014 34 MKGKTVMFVGDS 45 (304)
Q Consensus 34 lrgK~l~FVGDS 45 (304)
|.||+|.||||-
T Consensus 43 L~gk~il~lGDD 54 (243)
T PF01861_consen 43 LEGKRILFLGDD 54 (243)
T ss_dssp STT-EEEEES-T
T ss_pred ccCCEEEEEcCC
Confidence 789999999993
No 49
>PRK11891 aspartate carbamoyltransferase; Provisional
Probab=24.18 E-value=66 Score=32.32 Aligned_cols=27 Identities=22% Similarity=0.282 Sum_probs=22.3
Q ss_pred hcCCeEEEEeccchhhHHHHHHHHhhc
Q 022014 34 MKGKTVMFVGDSLGLNQWESLICMIHA 60 (304)
Q Consensus 34 lrgK~l~FVGDSl~Rnq~~SLlClL~~ 60 (304)
+.|++|+||||-..-|-..||+-++..
T Consensus 239 l~G~kIa~vGD~~~~rv~~Sl~~~la~ 265 (429)
T PRK11891 239 VDGAHIALVGDLKYGRTVHSLVKLLAL 265 (429)
T ss_pred cCCCEEEEECcCCCChHHHHHHHHHHH
Confidence 678999999998656888999888753
No 50
>PRK12562 ornithine carbamoyltransferase subunit F; Provisional
Probab=24.04 E-value=65 Score=31.17 Aligned_cols=26 Identities=19% Similarity=0.295 Sum_probs=21.9
Q ss_pred hcCCeEEEEeccchhhHHHHHHHHhhc
Q 022014 34 MKGKTVMFVGDSLGLNQWESLICMIHA 60 (304)
Q Consensus 34 lrgK~l~FVGDSl~Rnq~~SLlClL~~ 60 (304)
++|++|++|||-.+ |-..|++-++..
T Consensus 154 l~gl~va~vGD~~~-~v~~S~~~~~~~ 179 (334)
T PRK12562 154 FNEMTLVYAGDARN-NMGNSMLEAAAL 179 (334)
T ss_pred cCCcEEEEECCCCC-CHHHHHHHHHHH
Confidence 57899999999864 599999998864
No 51
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=24.00 E-value=65 Score=30.72 Aligned_cols=28 Identities=25% Similarity=0.192 Sum_probs=23.4
Q ss_pred hcCCeEEEEeccchhhHHHHHHHHhhcc
Q 022014 34 MKGKTVMFVGDSLGLNQWESLICMIHAA 61 (304)
Q Consensus 34 lrgK~l~FVGDSl~Rnq~~SLlClL~~~ 61 (304)
++|++|+||||-..-|-..||+=+++..
T Consensus 154 l~g~kv~~vGD~~~~~v~~Sl~~~~~~~ 181 (305)
T PRK00856 154 LEGLKVAIVGDIKHSRVARSNIQALTRL 181 (305)
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHc
Confidence 7899999999977558889988887753
No 52
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=23.94 E-value=65 Score=30.59 Aligned_cols=25 Identities=36% Similarity=0.529 Sum_probs=21.5
Q ss_pred hcCCeEEEEeccchhhHHHHHHHHhhc
Q 022014 34 MKGKTVMFVGDSLGLNQWESLICMIHA 60 (304)
Q Consensus 34 lrgK~l~FVGDSl~Rnq~~SLlClL~~ 60 (304)
+.|.+|++|||. + |-..||+.+|..
T Consensus 146 l~g~~v~~vGd~-~-~v~~Sl~~~l~~ 170 (304)
T TIGR00658 146 LKGVKVVYVGDG-N-NVCNSLMLAGAK 170 (304)
T ss_pred CCCcEEEEEeCC-C-chHHHHHHHHHH
Confidence 688999999996 3 699999998874
No 53
>PRK00779 ornithine carbamoyltransferase; Provisional
Probab=23.87 E-value=59 Score=30.90 Aligned_cols=27 Identities=33% Similarity=0.347 Sum_probs=21.8
Q ss_pred HHhcCCeEEEEeccchhhHHHHHHHHhhc
Q 022014 32 VKMKGKTVMFVGDSLGLNQWESLICMIHA 60 (304)
Q Consensus 32 ~~lrgK~l~FVGDSl~Rnq~~SLlClL~~ 60 (304)
..++|++|++||| -+ |-..||+-+|..
T Consensus 148 g~l~gl~i~~vGd-~~-~v~~Sl~~~l~~ 174 (304)
T PRK00779 148 GSLKGLKVAWVGD-GN-NVANSLLLAAAL 174 (304)
T ss_pred CCcCCcEEEEEeC-CC-ccHHHHHHHHHH
Confidence 3478899999999 34 588999998874
No 54
>PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis. RsgA is an unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover. It is dispensible for viability, but important for overall fitness. The intrinsic GTPase activity is stimulated by the presence of 30S (160-fold increase in kcat) or 70S (96 fold increase in kcat) ribosomes []. The GTPase is inhibited by aminoglycoside antibiotics such as neomycin and paromycin [] streptomycin and spectinomycin []. This inhibition is not due to competition for binding sites on the 30S or 70S ribosome []. ; GO: 0003924 GTPase activity, 0005525 GTP binding; PDB: 2YKR_W 2YV5_A 1T9H_A 2RCN_A 4A2I_V 1U0L_B.
Probab=22.76 E-value=74 Score=27.54 Aligned_cols=37 Identities=27% Similarity=0.158 Sum_probs=27.1
Q ss_pred CCCCHHHHHHHhcCCeEEEEeccchhhHHHHHHHHhhcc
Q 022014 23 IRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAA 61 (304)
Q Consensus 23 prfd~~~fl~~lrgK~l~FVGDSl~Rnq~~SLlClL~~~ 61 (304)
..-.-+++.+.++||+++|+|-|=.-- -||+-.|...
T Consensus 22 ~~~g~~~l~~~l~~k~~vl~G~SGvGK--SSLiN~L~~~ 58 (161)
T PF03193_consen 22 TGEGIEELKELLKGKTSVLLGQSGVGK--SSLINALLPE 58 (161)
T ss_dssp TTTTHHHHHHHHTTSEEEEECSTTSSH--HHHHHHHHTS
T ss_pred CCcCHHHHHHHhcCCEEEEECCCCCCH--HHHHHHHHhh
Confidence 455678899999999999999984432 3566656543
No 55
>PF14647 FAM91_N: FAM91 N-terminus
Probab=21.99 E-value=82 Score=30.20 Aligned_cols=31 Identities=23% Similarity=0.337 Sum_probs=25.7
Q ss_pred cCCCCCHHHHHHHhcCCeEEEEeccchhhHHHHHHHHhhcc
Q 022014 21 CLIRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAA 61 (304)
Q Consensus 21 ~Lprfd~~~fl~~lrgK~l~FVGDSl~Rnq~~SLlClL~~~ 61 (304)
.||.|.|.+-|.++- |+||||-.|+-=..+.
T Consensus 108 sLPNFTAaD~LRllG----------IGRNqYIdlmn~~RS~ 138 (308)
T PF14647_consen 108 SLPNFTAADCLRLLG----------IGRNQYIDLMNKCRSK 138 (308)
T ss_pred cCCCCcHHHHHHHhc----------chHHHHHHHHHHhchh
Confidence 699999999997762 8899999998766544
No 56
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=21.70 E-value=56 Score=33.04 Aligned_cols=39 Identities=26% Similarity=0.370 Sum_probs=28.1
Q ss_pred HHHHhcCCeEEEEeccchhhH-HHHHHHHhhccCCCCceEE
Q 022014 30 FLVKMKGKTVMFVGDSLGLNQ-WESLICMIHAAAPRTRTHM 69 (304)
Q Consensus 30 fl~~lrgK~l~FVGDSl~Rnq-~~SLlClL~~~~~~~~~~~ 69 (304)
.-+.++||||+.|=|||-|.- ..-++-||+.+-. ++++.
T Consensus 342 vr~~v~GKrVvlVDDSIVRGTTsr~IV~mlReAGA-kEVHv 381 (470)
T COG0034 342 VREVVKGKRVVLVDDSIVRGTTSRRIVQMLREAGA-KEVHV 381 (470)
T ss_pred hHHHhCCCeEEEEccccccCccHHHHHHHHHHhCC-CEEEE
Confidence 446789999999999998854 4557777775533 44443
No 57
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase. Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.
Probab=21.63 E-value=75 Score=30.23 Aligned_cols=28 Identities=21% Similarity=0.226 Sum_probs=23.4
Q ss_pred HhcCCeEEEEeccchhhHHHHHHHHhhc
Q 022014 33 KMKGKTVMFVGDSLGLNQWESLICMIHA 60 (304)
Q Consensus 33 ~lrgK~l~FVGDSl~Rnq~~SLlClL~~ 60 (304)
.+.|++|+||||-..-|-..|++=++..
T Consensus 147 ~l~g~~va~vGD~~~~~v~~Sl~~~~a~ 174 (301)
T TIGR00670 147 RLDGLKIALVGDLKYGRTVHSLAEALTR 174 (301)
T ss_pred CCCCCEEEEEccCCCCcHHHHHHHHHHH
Confidence 4789999999997766888998888764
No 58
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=21.32 E-value=2.3e+02 Score=22.56 Aligned_cols=95 Identities=11% Similarity=0.076 Sum_probs=51.3
Q ss_pred ccccEEEEeccccccccCcCCceeeeecCceeeccCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEeecCCCCCCCCCCC
Q 022014 120 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWS 199 (304)
Q Consensus 120 ~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~k~~vffRt~SP~Hf~gg~W~ 199 (304)
...|+|||+.|.==. . .++. .......|+.+|+++++.+.. .+.|++-+..|.....+.
T Consensus 60 ~~~d~vvi~~G~ND~----------~-~~~~---~~~~~~~~~~~l~~~i~~~~~-----~~~vi~~~~~~~~~~~~~-- 118 (179)
T PF13472_consen 60 PKPDLVVISFGTNDV----------L-NGDE---NDTSPEQYEQNLRRIIEQLRP-----HGPVILVSPPPRGPDPRD-- 118 (179)
T ss_dssp TTCSEEEEE--HHHH----------C-TCTT---CHHHHHHHHHHHHHHHHHHHT-----TSEEEEEE-SCSSSSTTT--
T ss_pred CCCCEEEEEcccccc----------c-cccc---ccccHHHHHHHHHHHHHhhcc-----cCcEEEecCCCccccccc--
Confidence 567999999885211 1 1100 012345788888888776632 238888888877743211
Q ss_pred CCCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHHHhcCCCeEEeecccccc
Q 022014 200 AGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSE 254 (304)
Q Consensus 200 ~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdIt~ls~ 254 (304)
.+ ...........++++++++++. .+.++|+.....
T Consensus 119 ---------~~--------~~~~~~~~~~~~~~~~~~a~~~--~~~~id~~~~~~ 154 (179)
T PF13472_consen 119 ---------PK--------QDYLNRRIDRYNQAIRELAKKY--GVPFIDLFDAFD 154 (179)
T ss_dssp ---------TH--------TTCHHHHHHHHHHHHHHHHHHC--TEEEEEHHHHHB
T ss_pred ---------cc--------chhhhhhHHHHHHHHHHHHHHc--CCEEEECHHHHc
Confidence 11 0000000112466677776665 599999998844
No 59
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=21.26 E-value=71 Score=23.15 Aligned_cols=16 Identities=31% Similarity=0.441 Sum_probs=12.0
Q ss_pred cCCeEEEEeccchhhH
Q 022014 35 KGKTVMFVGDSLGLNQ 50 (304)
Q Consensus 35 rgK~l~FVGDSl~Rnq 50 (304)
.-+++++||||+..-.
T Consensus 20 ~~~~~~~VGD~~~~Di 35 (75)
T PF13242_consen 20 DPSRCVMVGDSLETDI 35 (75)
T ss_dssp GGGGEEEEESSTTTHH
T ss_pred CHHHEEEEcCCcHhHH
Confidence 4578999999966543
No 60
>COG1578 Uncharacterized conserved protein [Function unknown]
Probab=20.57 E-value=1.3e+02 Score=28.36 Aligned_cols=40 Identities=18% Similarity=0.250 Sum_probs=35.0
Q ss_pred ecCccCCCCCHHHHHHHhcCCeEEEEeccchhhHHHHHHH
Q 022014 17 LWIVCLIRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLIC 56 (304)
Q Consensus 17 ~~~C~Lprfd~~~fl~~lrgK~l~FVGDSl~Rnq~~SLlC 56 (304)
+..=+|-.+|..+|++.|+|.+|.+++|--+.-+|.-++=
T Consensus 132 ~~~~~l~i~d~~k~~~~l~~a~VlYl~DNaGEi~FD~vli 171 (285)
T COG1578 132 LLDAELYIDDSPKLLELLKNASVLYLTDNAGEIVFDKVLI 171 (285)
T ss_pred hhcCcccccchHHHHHHhccCcEEEEecCCccHHHHHHHH
Confidence 3356888999999999999999999999999999887653
No 61
>PRK14804 ornithine carbamoyltransferase; Provisional
Probab=20.40 E-value=82 Score=30.08 Aligned_cols=26 Identities=27% Similarity=0.337 Sum_probs=21.6
Q ss_pred HhcCCeEEEEeccchhhHHHHHHHHhhc
Q 022014 33 KMKGKTVMFVGDSLGLNQWESLICMIHA 60 (304)
Q Consensus 33 ~lrgK~l~FVGDSl~Rnq~~SLlClL~~ 60 (304)
.++|++|++||| .-|-..||+=++..
T Consensus 150 ~l~g~~va~vGd--~~rv~~Sl~~~~~~ 175 (311)
T PRK14804 150 PLNQKQLTYIGV--HNNVVNSLIGITAA 175 (311)
T ss_pred CCCCCEEEEECC--CCcHHHHHHHHHHH
Confidence 368899999999 46888998888874
No 62
>PF15590 Imm15: Immunity protein 15
Probab=20.03 E-value=1.1e+02 Score=22.89 Aligned_cols=23 Identities=17% Similarity=0.150 Sum_probs=19.2
Q ss_pred hhcCCCCceEEEeecCCCCCCCC
Q 022014 174 NNIDRSKTRVFFQSISPTHYNPS 196 (304)
Q Consensus 174 ~~~~~~k~~vffRt~SP~Hf~gg 196 (304)
.-+|+..++-..+++.++|+.||
T Consensus 28 ~y~DP~D~r~W~~~~~~s~~hGG 50 (69)
T PF15590_consen 28 LYQDPRDGRYWEKSYPESHMHGG 50 (69)
T ss_pred hccCCCCCceeEEecCcccccCC
Confidence 34577888999999999999874
Done!