Query 022019
Match_columns 304
No_of_seqs 503 out of 1699
Neff 11.8
Searched_HMMs 46136
Date Fri Mar 29 07:24:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022019.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022019hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0272 U4/U6 small nuclear ri 100.0 3.4E-41 7.3E-46 257.0 15.2 224 22-294 234-458 (459)
2 KOG0271 Notchless-like WD40 re 100.0 2.6E-39 5.7E-44 244.1 21.5 235 35-301 138-444 (480)
3 KOG0286 G-protein beta subunit 100.0 1.5E-37 3.3E-42 226.7 24.0 256 8-302 4-265 (343)
4 KOG0272 U4/U6 small nuclear ri 100.0 3.1E-39 6.7E-44 246.3 15.5 210 53-301 210-423 (459)
5 KOG0263 Transcription initiati 100.0 2.2E-38 4.8E-43 258.9 19.5 208 53-299 444-652 (707)
6 KOG0271 Notchless-like WD40 re 100.0 7.1E-38 1.5E-42 236.4 19.7 211 51-301 106-402 (480)
7 KOG0279 G protein beta subunit 100.0 2.5E-37 5.5E-42 224.1 21.7 236 20-301 29-267 (315)
8 KOG0315 G-protein beta subunit 100.0 2.4E-36 5.1E-41 215.9 24.7 231 35-302 62-294 (311)
9 KOG0279 G protein beta subunit 100.0 2.9E-36 6.4E-41 218.6 24.4 219 53-303 8-229 (315)
10 KOG0263 Transcription initiati 100.0 4.7E-35 1E-39 239.5 21.2 226 55-302 373-613 (707)
11 KOG0295 WD40 repeat-containing 100.0 2.5E-34 5.3E-39 215.8 18.9 213 53-302 143-370 (406)
12 KOG0273 Beta-transducin family 100.0 1.1E-33 2.4E-38 218.9 23.0 208 60-301 235-487 (524)
13 KOG0645 WD40 repeat protein [G 100.0 2.5E-32 5.5E-37 197.5 26.3 214 52-297 6-226 (312)
14 KOG0285 Pleiotropic regulator 100.0 7.2E-34 1.6E-38 213.1 17.1 220 42-301 133-353 (460)
15 KOG0286 G-protein beta subunit 100.0 1.8E-32 4E-37 200.3 23.9 206 52-294 137-343 (343)
16 KOG0640 mRNA cleavage stimulat 100.0 4.7E-33 1E-37 205.3 17.6 232 54-302 106-341 (430)
17 KOG0273 Beta-transducin family 100.0 2.8E-32 6E-37 211.2 21.1 219 55-296 271-523 (524)
18 KOG0284 Polyadenylation factor 100.0 1.3E-33 2.8E-38 214.9 12.9 203 60-301 96-299 (464)
19 KOG0266 WD40 repeat-containing 100.0 1.4E-31 2.9E-36 222.8 26.3 215 53-301 196-414 (456)
20 KOG0266 WD40 repeat-containing 100.0 1.9E-31 4.2E-36 221.9 26.3 213 53-302 151-370 (456)
21 KOG0265 U5 snRNP-specific prot 100.0 6.5E-32 1.4E-36 198.1 20.4 204 55-297 42-247 (338)
22 KOG0315 G-protein beta subunit 100.0 3.9E-31 8.4E-36 189.3 23.1 228 22-298 13-247 (311)
23 KOG0291 WD40-repeat-containing 100.0 2.5E-31 5.4E-36 216.9 24.5 222 35-301 331-555 (893)
24 KOG2919 Guanine nucleotide-bin 100.0 1.6E-31 3.5E-36 198.1 20.3 276 22-303 13-288 (406)
25 PTZ00421 coronin; Provisional 100.0 1.4E-30 3E-35 216.1 28.2 218 55-301 70-295 (493)
26 KOG0284 Polyadenylation factor 100.0 4.8E-33 1E-37 211.8 12.0 206 55-299 133-340 (464)
27 KOG0282 mRNA splicing factor [ 100.0 2.3E-32 4.9E-37 212.3 14.2 217 45-300 199-466 (503)
28 KOG0316 Conserved WD40 repeat- 100.0 6.2E-31 1.4E-35 186.9 20.2 209 52-301 9-218 (307)
29 KOG0313 Microtubule binding pr 100.0 6.4E-31 1.4E-35 198.6 21.1 221 55-297 188-419 (423)
30 KOG0293 WD40 repeat-containing 100.0 4.1E-31 8.9E-36 201.8 16.9 241 18-298 235-515 (519)
31 KOG0292 Vesicle coat complex C 100.0 1.2E-30 2.5E-35 216.6 20.7 221 50-301 41-285 (1202)
32 KOG0277 Peroxisomal targeting 100.0 6E-31 1.3E-35 188.8 16.2 206 59-300 59-269 (311)
33 KOG0281 Beta-TrCP (transducin 100.0 5.4E-32 1.2E-36 202.7 10.9 198 54-300 231-432 (499)
34 KOG0295 WD40 repeat-containing 100.0 1.6E-30 3.4E-35 195.5 18.7 206 51-295 184-405 (406)
35 KOG0265 U5 snRNP-specific prot 100.0 5E-30 1.1E-34 188.2 20.4 228 53-294 83-336 (338)
36 KOG1446 Histone H3 (Lys4) meth 100.0 6.4E-29 1.4E-33 183.8 26.4 229 55-302 9-268 (311)
37 KOG0319 WD40-repeat-containing 100.0 9.9E-31 2.1E-35 212.8 17.3 240 21-297 379-620 (775)
38 KOG0282 mRNA splicing factor [ 100.0 3.2E-31 6.8E-36 206.0 13.0 232 21-294 229-503 (503)
39 KOG0296 Angio-associated migra 100.0 4.6E-29 9.9E-34 187.7 24.0 224 35-296 87-398 (399)
40 KOG0319 WD40-repeat-containing 100.0 3.2E-30 6.9E-35 209.8 18.6 219 55-302 360-583 (775)
41 cd00200 WD40 WD40 domain, foun 100.0 9.9E-29 2.1E-33 195.5 26.6 208 55-301 4-212 (289)
42 KOG0291 WD40-repeat-containing 100.0 3.6E-29 7.9E-34 204.4 23.8 210 51-298 298-510 (893)
43 KOG0277 Peroxisomal targeting 100.0 1.4E-30 3E-35 187.0 13.3 207 53-295 97-308 (311)
44 KOG0278 Serine/threonine kinas 100.0 5.1E-30 1.1E-34 183.8 15.6 203 58-300 98-301 (334)
45 PTZ00420 coronin; Provisional 100.0 5.1E-28 1.1E-32 202.0 30.1 216 52-299 66-296 (568)
46 PLN00181 protein SPA1-RELATED; 100.0 1.3E-28 2.9E-33 219.2 28.5 210 56-297 479-691 (793)
47 KOG1407 WD40 repeat protein [F 100.0 1.3E-29 2.8E-34 182.7 17.6 220 54-302 14-267 (313)
48 KOG0283 WD40 repeat-containing 100.0 2.8E-29 6E-34 207.4 21.0 215 51-297 360-577 (712)
49 KOG0283 WD40 repeat-containing 100.0 3.4E-29 7.3E-34 206.9 21.5 221 55-300 261-536 (712)
50 KOG0643 Translation initiation 100.0 7.7E-29 1.7E-33 179.3 20.4 230 18-297 21-318 (327)
51 KOG0276 Vesicle coat complex C 100.0 2.2E-29 4.7E-34 201.8 19.1 210 55-301 8-220 (794)
52 KOG0318 WD40 repeat stress pro 100.0 3.2E-28 6.9E-33 191.3 24.5 224 54-300 184-564 (603)
53 KOG0276 Vesicle coat complex C 100.0 3.1E-29 6.8E-34 200.9 18.4 221 35-299 36-260 (794)
54 KOG0645 WD40 repeat protein [G 100.0 7.8E-28 1.7E-32 174.4 23.8 235 21-296 29-311 (312)
55 KOG0285 Pleiotropic regulator 100.0 5.6E-29 1.2E-33 187.0 18.0 218 36-300 175-393 (460)
56 KOG0264 Nucleosome remodeling 100.0 9.8E-29 2.1E-33 190.8 19.6 219 51-297 168-405 (422)
57 cd00200 WD40 WD40 domain, foun 100.0 1.6E-27 3.5E-32 188.5 27.0 222 35-301 32-254 (289)
58 KOG0316 Conserved WD40 repeat- 100.0 8.8E-29 1.9E-33 176.0 17.2 231 17-301 27-262 (307)
59 KOG0643 Translation initiation 100.0 5.8E-28 1.3E-32 174.8 21.5 214 55-301 5-225 (327)
60 KOG0305 Anaphase promoting com 100.0 1.8E-28 3.8E-33 197.3 20.7 218 35-297 198-462 (484)
61 KOG0306 WD40-repeat-containing 100.0 2.5E-28 5.5E-33 199.4 21.4 213 55-298 449-666 (888)
62 PLN00181 protein SPA1-RELATED; 100.0 1.9E-27 4.2E-32 211.9 28.8 220 36-295 557-792 (793)
63 KOG0281 Beta-TrCP (transducin 100.0 1.6E-29 3.5E-34 189.5 12.6 197 59-301 196-393 (499)
64 KOG2096 WD40 repeat protein [G 100.0 5.8E-28 1.2E-32 179.1 18.9 246 36-294 63-400 (420)
65 KOG0772 Uncharacterized conser 100.0 3.3E-28 7.3E-33 190.9 18.3 227 53-302 160-400 (641)
66 KOG4283 Transcription-coupled 100.0 5.3E-28 1.1E-32 177.5 18.0 223 55-301 38-281 (397)
67 KOG0973 Histone transcription 100.0 1E-27 2.2E-32 203.2 22.2 236 50-298 59-357 (942)
68 KOG0294 WD40 repeat-containing 100.0 2.2E-27 4.8E-32 175.6 21.2 216 51-298 34-283 (362)
69 KOG0318 WD40 repeat stress pro 100.0 8.9E-27 1.9E-31 183.3 25.2 210 55-301 54-270 (603)
70 KOG0289 mRNA splicing factor [ 100.0 5E-27 1.1E-31 180.6 22.4 205 53-294 254-460 (506)
71 KOG0275 Conserved WD40 repeat- 100.0 2.1E-28 4.6E-33 182.1 13.3 212 58-300 211-471 (508)
72 PTZ00421 coronin; Provisional 100.0 1.7E-26 3.8E-31 191.8 26.2 216 59-299 19-248 (493)
73 KOG0264 Nucleosome remodeling 100.0 3.2E-27 6.8E-32 182.5 18.8 217 56-297 120-348 (422)
74 KOG0641 WD40 repeat protein [G 100.0 8.2E-26 1.8E-30 160.3 23.8 225 54-296 83-349 (350)
75 KOG0772 Uncharacterized conser 100.0 1E-27 2.2E-32 188.2 15.1 217 52-293 260-484 (641)
76 KOG0310 Conserved WD40 repeat- 100.0 4E-26 8.6E-31 178.0 23.6 204 53-295 103-308 (487)
77 KOG0288 WD40 repeat protein Ti 100.0 2.7E-27 5.8E-32 180.9 16.7 214 36-294 243-459 (459)
78 KOG0313 Microtubule binding pr 100.0 1.7E-26 3.6E-31 174.9 20.6 212 54-302 138-382 (423)
79 KOG0274 Cdc4 and related F-box 100.0 1.8E-26 4E-31 192.1 20.7 201 55-301 244-446 (537)
80 KOG0310 Conserved WD40 repeat- 99.9 3.2E-26 6.9E-31 178.5 19.0 207 56-301 64-273 (487)
81 KOG0296 Angio-associated migra 99.9 3.5E-25 7.5E-30 167.0 22.8 212 51-301 55-268 (399)
82 PTZ00420 coronin; Provisional 99.9 6.3E-25 1.4E-29 183.6 26.4 182 78-298 50-250 (568)
83 KOG0289 mRNA splicing factor [ 99.9 9.8E-26 2.1E-30 173.5 19.5 203 60-299 219-422 (506)
84 KOG0268 Sof1-like rRNA process 99.9 3.3E-26 7.1E-31 172.4 16.3 243 35-301 90-350 (433)
85 KOG2445 Nuclear pore complex c 99.9 4.6E-25 1E-29 162.9 21.9 249 22-296 28-318 (361)
86 KOG1332 Vesicle coat complex C 99.9 1.7E-25 3.6E-30 160.2 18.3 215 51-297 47-287 (299)
87 KOG0288 WD40 repeat protein Ti 99.9 2E-26 4.3E-31 176.2 14.0 205 54-301 213-422 (459)
88 KOG1446 Histone H3 (Lys4) meth 99.9 1.7E-24 3.7E-29 160.5 23.2 210 51-297 91-304 (311)
89 KOG0306 WD40-repeat-containing 99.9 3.2E-25 6.9E-30 181.5 21.2 206 62-301 414-627 (888)
90 KOG0308 Conserved WD40 repeat- 99.9 3E-26 6.6E-31 184.5 15.0 242 21-298 39-287 (735)
91 KOG0293 WD40 repeat-containing 99.9 2.1E-25 4.5E-30 170.9 18.4 215 50-300 214-429 (519)
92 KOG0308 Conserved WD40 repeat- 99.9 4.6E-26 1E-30 183.5 14.7 219 59-302 20-249 (735)
93 KOG1407 WD40 repeat protein [F 99.9 1.4E-24 3E-29 156.9 20.6 235 35-296 43-311 (313)
94 KOG0269 WD40 repeat-containing 99.9 3.5E-26 7.5E-31 187.5 13.8 202 63-298 90-298 (839)
95 KOG0302 Ribosome Assembly prot 99.9 4.3E-25 9.4E-30 167.2 18.5 226 55-297 146-379 (440)
96 KOG0640 mRNA cleavage stimulat 99.9 4.1E-25 8.8E-30 163.6 17.9 218 46-296 158-426 (430)
97 KOG0300 WD40 repeat-containing 99.9 2.6E-25 5.7E-30 165.3 16.6 223 53-298 183-430 (481)
98 KOG0641 WD40 repeat protein [G 99.9 5.7E-24 1.2E-28 151.0 22.4 223 59-297 31-304 (350)
99 KOG0268 Sof1-like rRNA process 99.9 5.7E-26 1.2E-30 171.2 12.3 210 55-299 61-305 (433)
100 KOG0646 WD40 repeat protein [G 99.9 1.3E-24 2.9E-29 168.7 19.8 203 59-301 80-312 (476)
101 KOG0275 Conserved WD40 repeat- 99.9 7.2E-27 1.6E-31 174.0 7.1 164 129-301 216-383 (508)
102 KOG0647 mRNA export protein (c 99.9 1.9E-24 4.2E-29 159.2 19.5 208 55-301 67-286 (347)
103 KOG0646 WD40 repeat protein [G 99.9 6.6E-25 1.4E-29 170.4 17.8 235 35-295 104-349 (476)
104 KOG1274 WD40 repeat protein [G 99.9 5E-24 1.1E-28 178.0 24.2 232 58-297 11-263 (933)
105 KOG0292 Vesicle coat complex C 99.9 4.7E-25 1E-29 183.7 17.9 205 56-299 5-239 (1202)
106 KOG1332 Vesicle coat complex C 99.9 2.6E-25 5.7E-30 159.2 13.6 214 55-296 6-241 (299)
107 KOG0267 Microtubule severing p 99.9 2.1E-26 4.5E-31 187.5 8.2 209 54-301 22-231 (825)
108 KOG0299 U3 snoRNP-associated p 99.9 1.7E-24 3.8E-29 167.8 18.3 201 57-298 199-412 (479)
109 KOG0274 Cdc4 and related F-box 99.9 7.6E-24 1.7E-28 176.5 22.1 213 36-301 273-487 (537)
110 KOG0299 U3 snoRNP-associated p 99.9 3.9E-24 8.4E-29 165.8 18.2 225 53-302 135-362 (479)
111 KOG0269 WD40 repeat-containing 99.9 1.1E-24 2.3E-29 178.9 15.4 225 35-298 111-342 (839)
112 KOG0973 Histone transcription 99.9 1.6E-23 3.4E-28 178.1 21.4 217 58-302 11-318 (942)
113 KOG1036 Mitotic spindle checkp 99.9 4E-23 8.7E-28 152.7 20.5 222 57-301 10-267 (323)
114 KOG4328 WD40 protein [Function 99.9 6.9E-24 1.5E-28 164.4 17.0 215 52-296 178-399 (498)
115 KOG0267 Microtubule severing p 99.9 3.8E-25 8.3E-30 180.3 10.5 192 55-284 65-257 (825)
116 KOG0270 WD40 repeat-containing 99.9 6.9E-24 1.5E-28 163.8 16.1 255 19-298 137-406 (463)
117 KOG0301 Phospholipase A2-activ 99.9 3.3E-23 7.1E-28 168.3 19.4 197 53-298 94-290 (745)
118 KOG0270 WD40 repeat-containing 99.9 2.2E-23 4.7E-28 161.1 17.3 209 56-301 239-454 (463)
119 KOG0302 Ribosome Assembly prot 99.9 1.9E-23 4.2E-28 158.3 16.0 216 49-294 200-436 (440)
120 KOG0650 WD40 repeat nucleolar 99.9 3.1E-23 6.6E-28 166.0 17.7 239 40-293 378-732 (733)
121 KOG1273 WD40 repeat protein [G 99.9 1.8E-22 4E-27 149.9 20.1 197 63-296 26-226 (405)
122 KOG0639 Transducin-like enhanc 99.9 2.3E-23 5E-28 163.7 15.1 228 36-303 442-670 (705)
123 KOG0303 Actin-binding protein 99.9 3.1E-22 6.8E-27 152.7 19.9 218 51-300 72-298 (472)
124 KOG0300 WD40 repeat-containing 99.9 4.3E-23 9.4E-28 153.5 14.6 218 50-302 138-392 (481)
125 KOG0305 Anaphase promoting com 99.9 1.5E-22 3.3E-27 163.3 18.7 196 65-301 182-381 (484)
126 KOG0307 Vesicle coat complex C 99.9 1.6E-23 3.4E-28 179.0 13.7 217 51-299 107-330 (1049)
127 KOG2445 Nuclear pore complex c 99.9 2.3E-21 5E-26 143.5 23.1 223 55-297 8-257 (361)
128 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 1.4E-20 3.1E-25 150.3 29.3 252 35-301 12-284 (300)
129 KOG0278 Serine/threonine kinas 99.9 1.5E-23 3.2E-28 150.9 10.6 206 55-301 9-218 (334)
130 KOG4283 Transcription-coupled 99.9 2.5E-22 5.5E-27 147.9 17.2 173 56-256 97-279 (397)
131 KOG4378 Nuclear protein COP1 [ 99.9 8.8E-23 1.9E-27 160.2 14.8 203 63-302 82-286 (673)
132 KOG1273 WD40 repeat protein [G 99.9 6.8E-22 1.5E-26 146.9 18.3 248 35-297 46-323 (405)
133 KOG1007 WD repeat protein TSSC 99.9 8.4E-22 1.8E-26 144.7 18.5 233 35-297 94-362 (370)
134 KOG1408 WD40 repeat protein [F 99.9 5.6E-22 1.2E-26 162.2 18.1 258 35-302 347-677 (1080)
135 KOG1539 WD repeat protein [Gen 99.9 1.1E-21 2.4E-26 162.6 19.9 199 59-295 447-647 (910)
136 KOG0639 Transducin-like enhanc 99.9 1.9E-22 4.1E-27 158.6 14.2 207 58-299 417-625 (705)
137 KOG1036 Mitotic spindle checkp 99.9 3.7E-21 8.1E-26 142.4 19.9 199 55-284 89-293 (323)
138 KOG1007 WD repeat protein TSSC 99.9 1.1E-21 2.4E-26 144.1 16.8 220 55-297 58-290 (370)
139 KOG0307 Vesicle coat complex C 99.9 6.9E-23 1.5E-27 175.1 11.9 215 60-301 64-289 (1049)
140 KOG1408 WD40 repeat protein [F 99.9 1.5E-21 3.3E-26 159.7 18.2 215 55-297 496-714 (1080)
141 KOG0301 Phospholipase A2-activ 99.9 2E-21 4.3E-26 158.1 18.6 201 54-300 51-253 (745)
142 KOG1009 Chromatin assembly com 99.9 3.9E-21 8.4E-26 147.2 19.0 260 21-298 28-374 (434)
143 KOG2048 WD40 repeat protein [G 99.9 3.1E-20 6.7E-25 150.8 23.8 229 35-299 48-278 (691)
144 KOG0290 Conserved WD40 repeat- 99.9 2.6E-21 5.6E-26 142.3 15.8 214 58-298 94-320 (364)
145 KOG0647 mRNA export protein (c 99.9 8.5E-21 1.8E-25 140.2 18.2 203 55-298 22-230 (347)
146 KOG0642 Cell-cycle nuclear pro 99.9 1.8E-21 3.8E-26 154.9 15.2 260 19-302 306-567 (577)
147 KOG0321 WD40 repeat-containing 99.9 5.7E-21 1.2E-25 154.2 17.8 225 53-300 93-351 (720)
148 KOG2048 WD40 repeat protein [G 99.9 1.5E-19 3.2E-24 146.9 24.5 210 55-301 20-238 (691)
149 KOG1538 Uncharacterized conser 99.9 7.2E-20 1.5E-24 149.1 22.5 223 35-297 34-294 (1081)
150 KOG2055 WD40 repeat protein [G 99.9 7.6E-20 1.6E-24 142.4 20.9 205 58-297 211-418 (514)
151 KOG1539 WD repeat protein [Gen 99.9 2.2E-20 4.7E-25 155.1 18.7 157 132-301 454-611 (910)
152 KOG2055 WD40 repeat protein [G 99.9 3.6E-20 7.8E-25 144.2 18.5 224 36-296 282-512 (514)
153 KOG2106 Uncharacterized conser 99.9 4.3E-19 9.3E-24 139.9 24.3 232 31-297 264-522 (626)
154 KOG1063 RNA polymerase II elon 99.9 6.1E-20 1.3E-24 149.5 20.0 255 19-298 206-604 (764)
155 KOG2110 Uncharacterized conser 99.9 2.9E-19 6.3E-24 135.6 22.2 225 60-298 5-250 (391)
156 KOG4328 WD40 protein [Function 99.9 3.9E-20 8.5E-25 143.8 17.7 238 29-302 205-456 (498)
157 KOG0321 WD40 repeat-containing 99.9 5.3E-20 1.1E-24 148.6 17.6 243 37-299 125-394 (720)
158 KOG0771 Prolactin regulatory e 99.9 8.9E-20 1.9E-24 140.6 17.1 201 64-297 148-355 (398)
159 KOG1587 Cytoplasmic dynein int 99.8 4.2E-19 9.2E-24 147.4 22.0 241 35-298 223-474 (555)
160 KOG1310 WD40 repeat protein [G 99.8 3.6E-20 7.8E-25 147.4 14.5 224 52-302 42-309 (758)
161 KOG4378 Nuclear protein COP1 [ 99.8 1.9E-19 4.1E-24 141.7 17.5 200 36-277 103-305 (673)
162 KOG0322 G-protein beta subunit 99.8 1.3E-19 2.7E-24 131.7 15.3 150 140-295 167-322 (323)
163 KOG1188 WD40 repeat protein [G 99.8 2.6E-19 5.6E-24 134.5 16.2 197 73-301 41-247 (376)
164 KOG1034 Transcriptional repres 99.8 9.7E-19 2.1E-23 130.9 19.0 213 58-297 87-384 (385)
165 TIGR03866 PQQ_ABC_repeats PQQ- 99.8 4.5E-18 9.7E-23 135.9 24.1 187 72-300 1-191 (300)
166 KOG1274 WD40 repeat protein [G 99.8 1.4E-18 3.1E-23 145.9 21.2 199 58-292 94-296 (933)
167 KOG0290 Conserved WD40 repeat- 99.8 1.4E-18 3E-23 128.0 17.6 205 57-293 147-362 (364)
168 KOG1445 Tumor-specific antigen 99.8 1.8E-19 3.8E-24 146.0 14.0 211 60-298 627-846 (1012)
169 KOG1523 Actin-related protein 99.8 2.3E-18 5.1E-23 128.4 18.1 211 59-299 9-239 (361)
170 KOG2096 WD40 repeat protein [G 99.8 3.6E-19 7.8E-24 132.8 13.8 165 114-296 81-308 (420)
171 KOG0649 WD40 repeat protein [G 99.8 1.6E-18 3.4E-23 124.7 16.3 210 62-301 12-240 (325)
172 KOG0294 WD40 repeat-containing 99.8 4.1E-18 9E-23 126.8 18.9 192 74-297 3-198 (362)
173 KOG4227 WD40 repeat protein [G 99.8 1.2E-18 2.5E-23 133.7 16.0 222 55-302 51-280 (609)
174 KOG2919 Guanine nucleotide-bin 99.8 2.6E-18 5.6E-23 128.4 16.4 193 63-284 161-359 (406)
175 KOG2106 Uncharacterized conser 99.8 5.5E-17 1.2E-21 128.2 23.3 199 55-295 363-625 (626)
176 KOG1445 Tumor-specific antigen 99.8 3.9E-19 8.5E-24 144.1 10.4 154 145-303 600-757 (1012)
177 KOG1034 Transcriptional repres 99.8 7.6E-18 1.6E-22 126.2 15.7 173 114-298 33-213 (385)
178 KOG1587 Cytoplasmic dynein int 99.8 4.4E-17 9.6E-22 135.5 20.3 249 30-297 261-517 (555)
179 KOG1272 WD40-repeat-containing 99.8 4.6E-19 1E-23 138.3 8.0 230 30-302 99-329 (545)
180 KOG1188 WD40 repeat protein [G 99.8 1.1E-17 2.4E-22 125.9 15.0 213 53-296 63-346 (376)
181 KOG0303 Actin-binding protein 99.8 4.9E-18 1.1E-22 130.1 13.2 176 120-302 28-209 (472)
182 KOG2394 WD40 protein DMR-N9 [G 99.8 1.9E-17 4.1E-22 131.7 16.7 177 70-274 183-383 (636)
183 KOG0644 Uncharacterized conser 99.8 3.1E-19 6.7E-24 148.5 6.4 223 45-301 175-431 (1113)
184 KOG1524 WD40 repeat-containing 99.8 1.7E-17 3.6E-22 132.1 14.9 183 55-292 99-282 (737)
185 PRK01742 tolB translocation pr 99.8 1E-16 2.2E-21 133.5 20.6 196 55-296 198-401 (429)
186 PRK11028 6-phosphogluconolacto 99.8 5.3E-16 1.1E-20 125.5 24.2 209 61-296 80-304 (330)
187 KOG3881 Uncharacterized conser 99.8 1.9E-16 4.2E-21 121.3 19.9 213 56-299 101-323 (412)
188 KOG0649 WD40 repeat protein [G 99.8 4.5E-17 9.8E-22 117.3 14.6 165 133-301 17-191 (325)
189 KOG1517 Guanine nucleotide bin 99.8 1.2E-16 2.6E-21 136.6 19.2 236 35-298 1087-1335(1387)
190 KOG1063 RNA polymerase II elon 99.7 2.4E-16 5.1E-21 129.0 18.7 234 49-297 180-438 (764)
191 KOG2139 WD40 repeat protein [G 99.7 3.1E-16 6.7E-21 119.2 17.7 199 60-295 98-308 (445)
192 PRK11028 6-phosphogluconolacto 99.7 5E-15 1.1E-19 119.8 26.2 210 60-297 34-259 (330)
193 KOG1009 Chromatin assembly com 99.7 4.9E-17 1.1E-21 125.0 13.5 178 114-299 8-198 (434)
194 KOG1517 Guanine nucleotide bin 99.7 1.2E-16 2.6E-21 136.6 15.9 256 12-299 1116-1384(1387)
195 COG2319 FOG: WD40 repeat [Gene 99.7 1.8E-14 3.8E-19 120.5 28.0 209 55-301 103-319 (466)
196 KOG2111 Uncharacterized conser 99.7 1.9E-14 4.1E-19 107.7 24.4 223 63-298 8-258 (346)
197 KOG1240 Protein kinase contain 99.7 2.5E-15 5.5E-20 130.4 22.5 224 52-300 1040-1277(1431)
198 KOG1538 Uncharacterized conser 99.7 3.3E-15 7.2E-20 122.4 21.3 201 62-295 14-251 (1081)
199 PF08662 eIF2A: Eukaryotic tra 99.7 3.3E-15 7.1E-20 110.2 19.3 113 175-302 61-184 (194)
200 KOG1524 WD40 repeat-containing 99.7 1.7E-16 3.6E-21 126.5 13.1 147 133-298 111-257 (737)
201 COG2319 FOG: WD40 repeat [Gene 99.7 2E-14 4.3E-19 120.2 25.9 209 55-300 60-275 (466)
202 KOG2321 WD40 repeat protein [G 99.7 1.8E-15 4E-20 121.5 17.9 228 58-302 49-308 (703)
203 KOG1523 Actin-related protein 99.7 4.3E-15 9.3E-20 111.3 18.1 213 50-287 45-269 (361)
204 PRK03629 tolB translocation pr 99.7 1.5E-14 3.1E-19 120.5 23.1 198 56-297 194-407 (429)
205 KOG0650 WD40 repeat nucleolar 99.7 6.2E-16 1.4E-20 124.7 13.7 70 223-294 608-678 (733)
206 PRK04922 tolB translocation pr 99.7 2.5E-14 5.5E-19 119.5 23.2 201 55-298 198-413 (433)
207 KOG1354 Serine/threonine prote 99.7 1.1E-15 2.3E-20 115.6 13.4 231 59-297 24-302 (433)
208 PRK05137 tolB translocation pr 99.7 5E-14 1.1E-18 117.9 23.5 202 55-299 196-415 (435)
209 KOG1963 WD40 repeat protein [G 99.7 4.1E-14 8.8E-19 119.1 22.1 216 55-298 246-540 (792)
210 KOG2394 WD40 protein DMR-N9 [G 99.7 5.1E-15 1.1E-19 118.1 15.9 165 135-302 182-368 (636)
211 KOG4227 WD40 repeat protein [G 99.7 1.4E-14 3E-19 111.6 17.0 209 57-295 102-386 (609)
212 PRK02889 tolB translocation pr 99.7 4.4E-14 9.4E-19 117.7 20.7 200 55-295 190-402 (427)
213 KOG1963 WD40 repeat protein [G 99.6 4.8E-14 1E-18 118.6 20.1 236 54-298 51-324 (792)
214 KOG2139 WD40 repeat protein [G 99.6 1.2E-13 2.6E-18 105.4 20.0 210 60-297 140-384 (445)
215 PF08662 eIF2A: Eukaryotic tra 99.6 1E-13 2.2E-18 102.3 19.3 156 64-261 9-186 (194)
216 PF10282 Lactonase: Lactonase, 99.6 6.7E-13 1.4E-17 107.6 25.4 226 60-299 86-327 (345)
217 KOG0644 Uncharacterized conser 99.6 1.6E-15 3.5E-20 126.9 10.1 210 53-300 225-472 (1113)
218 KOG0642 Cell-cycle nuclear pro 99.6 5.8E-15 1.3E-19 118.3 12.7 223 55-302 289-525 (577)
219 PRK01742 tolB translocation pr 99.6 4.2E-14 9.2E-19 118.0 18.4 177 81-300 183-365 (429)
220 KOG0771 Prolactin regulatory e 99.6 6.8E-15 1.5E-19 114.0 12.2 159 132-303 150-318 (398)
221 KOG4547 WD40 repeat-containing 99.6 6.3E-14 1.4E-18 113.1 17.9 200 70-297 3-221 (541)
222 KOG1272 WD40-repeat-containing 99.6 1.2E-15 2.6E-20 119.5 6.4 188 62-294 172-360 (545)
223 KOG1334 WD40 repeat protein [G 99.6 2.5E-14 5.5E-19 112.9 13.5 249 49-299 131-469 (559)
224 PF02239 Cytochrom_D1: Cytochr 99.6 2.5E-12 5.5E-17 104.2 25.3 195 75-301 9-207 (369)
225 KOG4497 Uncharacterized conser 99.6 1.8E-13 3.9E-18 103.2 16.0 186 66-294 14-238 (447)
226 KOG0974 WD-repeat protein WDR6 99.6 3.6E-13 7.9E-18 115.4 17.4 199 62-297 89-289 (967)
227 TIGR02658 TTQ_MADH_Hv methylam 99.6 1.8E-11 3.8E-16 97.3 25.7 216 68-301 53-335 (352)
228 PRK01029 tolB translocation pr 99.6 2.6E-12 5.7E-17 106.7 22.0 205 58-300 182-407 (428)
229 KOG0322 G-protein beta subunit 99.5 8E-14 1.7E-18 101.9 10.9 171 58-252 148-322 (323)
230 COG5170 CDC55 Serine/threonine 99.5 1.1E-13 2.4E-18 103.7 11.8 235 59-301 25-314 (460)
231 PRK00178 tolB translocation pr 99.5 3.9E-12 8.5E-17 106.7 22.2 201 55-298 193-408 (430)
232 PF02239 Cytochrom_D1: Cytochr 99.5 3.2E-11 7E-16 97.8 26.6 214 55-301 31-307 (369)
233 PRK02889 tolB translocation pr 99.5 3.6E-12 7.7E-17 106.4 21.5 161 118-300 194-364 (427)
234 TIGR02800 propeller_TolB tol-p 99.5 5.5E-12 1.2E-16 105.6 22.8 199 55-296 184-397 (417)
235 PRK04792 tolB translocation pr 99.5 5E-12 1.1E-16 105.8 22.3 199 56-296 213-425 (448)
236 KOG2110 Uncharacterized conser 99.5 5.6E-12 1.2E-16 96.5 19.9 148 140-302 58-210 (391)
237 KOG3881 Uncharacterized conser 99.5 7E-13 1.5E-17 102.1 15.1 189 61-276 149-342 (412)
238 KOG2321 WD40 repeat protein [G 99.5 7.3E-13 1.6E-17 106.9 15.2 153 134-295 183-342 (703)
239 KOG0280 Uncharacterized conser 99.5 6.8E-12 1.5E-16 93.3 19.0 198 80-302 44-247 (339)
240 COG2706 3-carboxymuconate cycl 99.5 9.7E-11 2.1E-15 89.9 25.5 220 64-297 92-322 (346)
241 KOG1310 WD40 repeat protein [G 99.5 9.5E-14 2.1E-18 111.4 9.5 172 114-297 45-232 (758)
242 KOG1354 Serine/threonine prote 99.5 1.2E-12 2.6E-17 99.4 14.4 237 60-300 84-363 (433)
243 PF10282 Lactonase: Lactonase, 99.5 7.8E-11 1.7E-15 95.6 26.1 212 61-296 37-275 (345)
244 PRK04922 tolB translocation pr 99.5 1.1E-11 2.3E-16 103.9 20.5 159 118-300 202-372 (433)
245 KOG1240 Protein kinase contain 99.5 2.1E-11 4.6E-16 106.7 22.5 252 20-300 1062-1338(1431)
246 PRK05137 tolB translocation pr 99.5 4.3E-11 9.3E-16 100.4 23.3 158 117-298 199-368 (435)
247 PRK03629 tolB translocation pr 99.5 6.2E-11 1.3E-15 98.9 23.3 158 118-299 197-366 (429)
248 KOG4497 Uncharacterized conser 99.5 4E-11 8.6E-16 90.8 19.5 74 224-300 320-395 (447)
249 KOG2315 Predicted translation 99.4 9.6E-11 2.1E-15 94.6 22.3 202 57-296 162-390 (566)
250 KOG1064 RAVE (regulator of V-A 99.4 8.5E-13 1.8E-17 119.1 10.4 194 55-298 2203-2400(2439)
251 KOG2111 Uncharacterized conser 99.4 5.4E-10 1.2E-14 84.3 22.2 176 35-254 76-257 (346)
252 TIGR02800 propeller_TolB tol-p 99.4 2.1E-10 4.5E-15 96.1 22.6 157 118-299 188-357 (417)
253 KOG4190 Uncharacterized conser 99.4 8.2E-13 1.8E-17 106.6 7.1 222 53-300 728-952 (1034)
254 KOG4532 WD40-like repeat conta 99.4 3.8E-10 8.1E-15 83.3 18.9 204 64-301 71-287 (344)
255 KOG0974 WD-repeat protein WDR6 99.4 1.1E-10 2.3E-15 100.7 18.5 220 61-297 8-247 (967)
256 KOG3914 WD repeat protein WDR4 99.3 3.3E-11 7.2E-16 93.4 12.8 159 128-301 64-228 (390)
257 KOG1409 Uncharacterized conser 99.3 7.5E-11 1.6E-15 89.8 14.3 219 51-300 15-274 (404)
258 PRK04792 tolB translocation pr 99.3 7.2E-10 1.6E-14 93.0 21.7 158 119-299 217-385 (448)
259 KOG0280 Uncharacterized conser 99.3 4.9E-10 1.1E-14 83.7 16.6 187 60-276 69-264 (339)
260 COG2706 3-carboxymuconate cycl 99.3 7.2E-09 1.6E-13 79.9 23.4 214 56-297 35-275 (346)
261 PLN02919 haloacid dehalogenase 99.3 3.3E-09 7.2E-14 97.2 25.3 227 62-300 625-892 (1057)
262 PRK00178 tolB translocation pr 99.3 1.5E-09 3.3E-14 91.1 21.4 161 117-300 196-367 (430)
263 KOG4547 WD40 repeat-containing 99.3 6E-10 1.3E-14 90.6 17.5 155 136-302 3-178 (541)
264 PF15492 Nbas_N: Neuroblastoma 99.3 6E-09 1.3E-13 78.0 21.4 203 63-300 46-263 (282)
265 KOG0309 Conserved WD40 repeat- 99.2 6.9E-11 1.5E-15 98.6 10.3 168 111-297 106-340 (1081)
266 PRK04043 tolB translocation pr 99.2 2E-08 4.4E-13 83.2 24.5 193 62-298 189-402 (419)
267 COG4946 Uncharacterized protei 99.2 7.4E-09 1.6E-13 82.6 20.3 174 68-284 327-507 (668)
268 KOG3914 WD repeat protein WDR4 99.2 5.6E-10 1.2E-14 86.7 13.2 164 63-262 65-232 (390)
269 KOG2041 WD40 repeat protein [G 99.2 1.9E-09 4.2E-14 90.1 16.7 213 58-284 12-277 (1189)
270 PRK01029 tolB translocation pr 99.2 1.3E-08 2.8E-13 84.9 20.7 156 133-300 191-363 (428)
271 KOG4714 Nucleoporin [Nuclear s 99.2 1.3E-09 2.8E-14 80.1 12.9 109 175-294 181-316 (319)
272 KOG1409 Uncharacterized conser 99.2 3.4E-09 7.3E-14 81.0 15.1 159 55-253 109-270 (404)
273 KOG1912 WD40 repeat protein [G 99.2 1.5E-08 3.2E-13 85.6 20.0 219 51-297 46-305 (1062)
274 PF00400 WD40: WD domain, G-be 99.1 2.8E-10 6.1E-15 60.5 5.9 38 51-88 2-39 (39)
275 PF08450 SGL: SMP-30/Gluconola 99.1 4.3E-07 9.2E-12 70.4 25.8 190 63-284 42-244 (246)
276 PF00400 WD40: WD domain, G-be 99.1 5E-10 1.1E-14 59.6 6.4 39 255-294 1-39 (39)
277 KOG4714 Nucleoporin [Nuclear s 99.1 2.7E-10 5.9E-15 83.6 7.0 147 137-297 100-255 (319)
278 COG5170 CDC55 Serine/threonine 99.1 2.5E-09 5.4E-14 80.8 11.5 231 61-295 86-366 (460)
279 KOG4532 WD40-like repeat conta 99.1 8.4E-08 1.8E-12 71.2 19.2 162 131-300 163-335 (344)
280 KOG2041 WD40 repeat protein [G 99.1 5.3E-09 1.1E-13 87.5 14.2 211 54-297 65-338 (1189)
281 KOG2695 WD40 repeat protein [G 99.1 8.2E-10 1.8E-14 84.3 8.0 148 142-301 228-381 (425)
282 PLN02919 haloacid dehalogenase 99.0 3.4E-07 7.4E-12 84.3 25.1 222 64-300 571-837 (1057)
283 PF04762 IKI3: IKI3 family; I 99.0 4E-07 8.6E-12 82.4 23.9 206 59-297 208-457 (928)
284 PF08450 SGL: SMP-30/Gluconola 99.0 4.5E-06 9.8E-11 64.7 26.8 196 65-301 4-217 (246)
285 KOG1064 RAVE (regulator of V-A 99.0 5.7E-09 1.2E-13 95.4 11.5 159 116-300 2205-2370(2439)
286 KOG1334 WD40 repeat protein [G 99.0 1.9E-09 4.2E-14 85.9 7.5 165 116-297 139-313 (559)
287 KOG2314 Translation initiation 99.0 9.4E-08 2E-12 77.8 16.7 114 175-296 447-573 (698)
288 COG4946 Uncharacterized protei 99.0 5E-07 1.1E-11 72.5 20.4 146 137-301 331-482 (668)
289 TIGR02658 TTQ_MADH_Hv methylam 99.0 1.7E-06 3.6E-11 69.3 23.5 192 82-302 27-293 (352)
290 PF06977 SdiA-regulated: SdiA- 99.0 3.9E-06 8.4E-11 64.0 24.3 212 55-293 16-247 (248)
291 KOG2066 Vacuolar assembly/sort 98.9 4.8E-08 1E-12 82.8 15.1 185 59-297 38-234 (846)
292 KOG4190 Uncharacterized conser 98.9 6.3E-09 1.4E-13 84.7 9.7 152 137-301 746-911 (1034)
293 PF07433 DUF1513: Protein of u 98.9 9.3E-07 2E-11 68.4 20.3 194 66-292 56-281 (305)
294 KOG1275 PAB-dependent poly(A) 98.9 6.2E-08 1.3E-12 83.3 15.0 141 137-294 186-340 (1118)
295 COG5354 Uncharacterized protei 98.9 7.1E-07 1.5E-11 72.1 20.0 131 148-298 255-397 (561)
296 PF04762 IKI3: IKI3 family; I 98.9 9.2E-07 2E-11 80.2 23.1 201 59-298 74-335 (928)
297 KOG2315 Predicted translation 98.9 2.1E-07 4.5E-12 75.9 16.8 136 112-275 263-410 (566)
298 PF07433 DUF1513: Protein of u 98.9 6.4E-06 1.4E-10 63.9 23.7 205 63-301 7-252 (305)
299 KOG2114 Vacuolar assembly/sort 98.9 9E-07 1.9E-11 76.0 20.3 201 67-298 30-245 (933)
300 KOG2695 WD40 repeat protein [G 98.9 1.8E-08 3.8E-13 77.3 9.3 136 120-274 253-401 (425)
301 PRK04043 tolB translocation pr 98.9 1.2E-06 2.6E-11 72.9 20.8 150 132-299 193-360 (419)
302 KOG0882 Cyclophilin-related pe 98.9 3.6E-08 7.7E-13 78.2 10.5 210 58-301 7-236 (558)
303 KOG1832 HIV-1 Vpr-binding prot 98.9 2.6E-09 5.7E-14 91.4 4.5 205 47-301 1088-1296(1516)
304 KOG2314 Translation initiation 98.8 4.7E-07 1E-11 73.9 16.8 182 64-283 214-411 (698)
305 PF11768 DUF3312: Protein of u 98.8 4.8E-06 1E-10 69.0 22.7 75 220-298 257-331 (545)
306 PF13360 PQQ_2: PQQ-like domai 98.8 1.3E-05 2.8E-10 61.8 23.6 192 71-302 35-236 (238)
307 KOG1645 RING-finger-containing 98.8 2.9E-07 6.2E-12 72.2 12.8 82 114-208 188-272 (463)
308 PF08553 VID27: VID27 cytoplas 98.7 1.5E-06 3.3E-11 76.1 18.0 147 137-296 492-647 (794)
309 PF13360 PQQ_2: PQQ-like domai 98.7 1.2E-05 2.5E-10 62.0 20.6 150 137-301 35-196 (238)
310 KOG1645 RING-finger-containing 98.7 1.7E-06 3.6E-11 68.1 14.6 83 52-158 185-268 (463)
311 KOG1920 IkappaB kinase complex 98.7 8E-06 1.7E-10 73.0 20.3 178 59-256 108-325 (1265)
312 TIGR03300 assembly_YfgL outer 98.7 6.5E-06 1.4E-10 68.2 18.9 190 71-301 64-264 (377)
313 KOG1008 Uncharacterized conser 98.6 1.5E-08 3.3E-13 83.7 2.8 205 60-297 56-276 (783)
314 COG5354 Uncharacterized protei 98.6 2.6E-06 5.6E-11 69.0 15.1 202 59-297 31-264 (561)
315 KOG1912 WD40 repeat protein [G 98.6 4.7E-06 1E-10 71.0 16.9 105 140-255 439-553 (1062)
316 PF06433 Me-amine-dh_H: Methyl 98.6 5.3E-05 1.1E-09 59.7 21.2 210 64-301 98-325 (342)
317 PF11768 DUF3312: Protein of u 98.6 4.4E-07 9.6E-12 74.9 10.3 76 57-158 256-331 (545)
318 KOG0882 Cyclophilin-related pe 98.6 1.5E-06 3.3E-11 69.3 12.7 243 19-301 20-310 (558)
319 TIGR03300 assembly_YfgL outer 98.6 2.6E-05 5.6E-10 64.6 20.7 147 139-301 191-343 (377)
320 KOG1920 IkappaB kinase complex 98.5 3.1E-05 6.6E-10 69.5 20.1 203 59-298 67-324 (1265)
321 KOG2066 Vacuolar assembly/sort 98.5 1.6E-05 3.6E-10 68.0 17.7 170 51-253 49-233 (846)
322 COG0823 TolB Periplasmic compo 98.5 1.7E-05 3.7E-10 65.8 17.0 189 57-284 189-388 (425)
323 PRK02888 nitrous-oxide reducta 98.5 1.5E-05 3.3E-10 67.7 16.8 140 135-284 285-450 (635)
324 COG3391 Uncharacterized conser 98.5 0.0003 6.4E-09 58.2 24.2 203 63-300 76-287 (381)
325 KOG2395 Protein involved in va 98.5 2E-05 4.3E-10 64.6 16.2 145 140-296 348-500 (644)
326 PF15492 Nbas_N: Neuroblastoma 98.4 8.6E-05 1.9E-09 56.2 17.8 147 133-284 4-166 (282)
327 KOG1008 Uncharacterized conser 98.4 5.6E-08 1.2E-12 80.5 1.1 171 55-253 97-275 (783)
328 PF08596 Lgl_C: Lethal giant l 98.4 0.00034 7.3E-09 57.7 22.7 230 62-302 3-296 (395)
329 KOG1275 PAB-dependent poly(A) 98.4 5.3E-06 1.1E-10 72.0 12.4 151 62-251 179-340 (1118)
330 PF08596 Lgl_C: Lethal giant l 98.4 5.6E-05 1.2E-09 62.1 17.9 223 50-295 76-334 (395)
331 COG0823 TolB Periplasmic compo 98.4 1.6E-05 3.4E-10 66.0 14.6 152 132-299 198-361 (425)
332 KOG0309 Conserved WD40 repeat- 98.4 4.5E-06 9.9E-11 70.8 10.4 158 134-302 32-194 (1081)
333 PF14783 BBS2_Mid: Ciliary BBS 98.4 0.0001 2.2E-09 48.0 14.3 92 139-249 16-110 (111)
334 KOG4640 Anaphase-promoting com 98.2 6.1E-06 1.3E-10 68.7 8.4 76 224-302 22-98 (665)
335 PF04053 Coatomer_WDAD: Coatom 98.2 0.00016 3.4E-09 60.4 16.7 146 122-296 28-173 (443)
336 KOG3617 WD40 and TPR repeat-co 98.2 2E-05 4.3E-10 68.2 11.2 103 135-253 24-131 (1416)
337 KOG2114 Vacuolar assembly/sort 98.2 0.00015 3.3E-09 62.9 15.9 155 135-297 32-202 (933)
338 PRK02888 nitrous-oxide reducta 98.2 0.00085 1.8E-08 57.5 19.9 151 134-297 200-405 (635)
339 smart00320 WD40 WD40 repeats. 98.2 7.7E-06 1.7E-10 42.5 5.3 36 53-88 5-40 (40)
340 smart00320 WD40 WD40 repeats. 98.2 1.1E-05 2.3E-10 42.0 5.8 39 255-294 2-40 (40)
341 PRK11138 outer membrane biogen 98.2 0.00063 1.4E-08 56.8 18.8 201 71-301 68-279 (394)
342 COG3386 Gluconolactonase [Carb 98.2 0.0018 3.8E-08 51.5 20.1 106 175-284 164-274 (307)
343 PRK11138 outer membrane biogen 98.1 0.0021 4.5E-08 53.7 21.7 135 139-295 257-393 (394)
344 COG3204 Uncharacterized protei 98.1 0.002 4.4E-08 49.5 19.2 202 58-284 83-301 (316)
345 KOG1832 HIV-1 Vpr-binding prot 98.1 2.5E-06 5.4E-11 73.9 3.9 147 132-301 1107-1260(1516)
346 PF04841 Vps16_N: Vps16, N-ter 98.1 0.004 8.8E-08 52.0 21.6 57 237-298 192-248 (410)
347 COG3490 Uncharacterized protei 98.0 0.00026 5.6E-09 53.8 12.7 200 66-294 119-346 (366)
348 PF04053 Coatomer_WDAD: Coatom 98.0 0.0011 2.3E-08 55.6 17.7 176 56-284 28-214 (443)
349 KOG3621 WD40 repeat-containing 98.0 4.9E-05 1.1E-09 64.4 9.8 114 175-297 35-155 (726)
350 PF06977 SdiA-regulated: SdiA- 98.0 0.0032 6.8E-08 48.4 21.2 166 120-299 22-203 (248)
351 KOG3617 WD40 and TPR repeat-co 98.0 2.3E-05 5E-10 67.8 7.8 108 177-296 19-131 (1416)
352 PF03178 CPSF_A: CPSF A subuni 98.0 0.0036 7.8E-08 50.7 19.7 168 114-297 18-203 (321)
353 KOG3621 WD40 repeat-containing 98.0 7E-05 1.5E-09 63.5 9.6 133 135-274 42-179 (726)
354 COG3391 Uncharacterized conser 98.0 0.0024 5.1E-08 52.9 18.5 159 127-301 74-244 (381)
355 KOG4640 Anaphase-promoting com 98.0 7.8E-05 1.7E-09 62.4 9.5 93 120-232 21-115 (665)
356 PF03178 CPSF_A: CPSF A subuni 97.9 0.0067 1.4E-07 49.1 21.7 187 72-293 42-262 (321)
357 PF14783 BBS2_Mid: Ciliary BBS 97.9 0.0016 3.5E-08 42.5 13.1 99 63-197 2-109 (111)
358 PF08553 VID27: VID27 cytoplas 97.9 0.0078 1.7E-07 53.7 20.4 61 137-202 587-647 (794)
359 PRK13616 lipoprotein LpqB; Pro 97.8 0.011 2.4E-07 51.7 20.6 112 175-291 449-563 (591)
360 PF00930 DPPIV_N: Dipeptidyl p 97.8 0.0013 2.7E-08 54.0 14.3 64 135-204 1-73 (353)
361 PF05096 Glu_cyclase_2: Glutam 97.8 0.0098 2.1E-07 45.6 22.2 188 60-284 44-249 (264)
362 PF15390 DUF4613: Domain of un 97.7 0.0032 6.9E-08 53.1 14.4 120 175-296 58-186 (671)
363 KOG4649 PQQ (pyrrolo-quinoline 97.7 0.013 2.9E-07 44.3 18.5 101 73-204 24-125 (354)
364 KOG2444 WD40 repeat protein [G 97.6 0.00028 6E-09 51.9 6.6 141 141-297 33-178 (238)
365 COG3386 Gluconolactonase [Carb 97.6 0.025 5.4E-07 45.1 20.8 141 150-301 87-247 (307)
366 cd00216 PQQ_DH Dehydrogenases 97.5 0.044 9.6E-07 47.2 20.4 211 72-302 61-325 (488)
367 KOG2395 Protein involved in va 97.5 0.0047 1E-07 51.3 13.2 124 55-203 371-501 (644)
368 PF00780 CNH: CNH domain; Int 97.5 0.029 6.3E-07 44.3 18.1 149 137-298 6-167 (275)
369 PF00780 CNH: CNH domain; Int 97.5 0.033 7.2E-07 44.0 23.1 149 70-254 5-166 (275)
370 PF12894 Apc4_WD40: Anaphase-p 97.5 0.00058 1.3E-08 37.2 5.3 35 265-301 11-45 (47)
371 cd00216 PQQ_DH Dehydrogenases 97.5 0.058 1.3E-06 46.5 22.3 150 135-301 225-429 (488)
372 KOG4649 PQQ (pyrrolo-quinoline 97.4 0.026 5.6E-07 42.8 15.2 136 138-291 23-160 (354)
373 TIGR02604 Piru_Ver_Nterm putat 97.4 0.025 5.3E-07 46.8 17.0 149 129-284 16-202 (367)
374 COG3204 Uncharacterized protei 97.4 0.033 7.2E-07 43.1 16.2 165 120-296 86-263 (316)
375 PF06433 Me-amine-dh_H: Methyl 97.4 0.045 9.8E-07 43.7 20.3 211 64-302 39-283 (342)
376 COG5167 VID27 Protein involved 97.4 0.035 7.6E-07 46.3 16.6 142 141-296 483-632 (776)
377 PF02897 Peptidase_S9_N: Proly 97.4 0.066 1.4E-06 45.1 24.0 200 62-296 125-357 (414)
378 PF12894 Apc4_WD40: Anaphase-p 97.4 0.00086 1.9E-08 36.5 5.2 31 60-90 11-41 (47)
379 PHA02713 hypothetical protein; 97.4 0.017 3.8E-07 50.4 16.0 63 234-299 463-536 (557)
380 PRK13616 lipoprotein LpqB; Pro 97.3 0.023 5.1E-07 49.7 16.3 151 131-295 354-524 (591)
381 PF00930 DPPIV_N: Dipeptidyl p 97.3 0.07 1.5E-06 43.9 21.1 142 135-284 192-346 (353)
382 PF14655 RAB3GAP2_N: Rab3 GTPa 97.3 0.075 1.6E-06 44.2 21.9 102 65-182 6-117 (415)
383 PF14870 PSII_BNR: Photosynthe 97.3 0.06 1.3E-06 42.8 17.7 146 135-293 153-301 (302)
384 KOG2079 Vacuolar assembly/sort 97.2 0.0022 4.8E-08 57.5 8.5 102 184-296 98-203 (1206)
385 PF15390 DUF4613: Domain of un 97.2 0.03 6.6E-07 47.5 14.4 125 119-253 56-186 (671)
386 PF05694 SBP56: 56kDa selenium 97.1 0.11 2.4E-06 42.8 21.4 219 58-299 61-345 (461)
387 PF02897 Peptidase_S9_N: Proly 97.1 0.13 2.8E-06 43.4 20.0 111 133-255 130-262 (414)
388 TIGR03075 PQQ_enz_alc_DH PQQ-d 97.0 0.19 4.1E-06 43.8 20.0 209 72-301 69-338 (527)
389 PF10647 Gmad1: Lipoprotein Lp 97.0 0.1 2.2E-06 40.6 21.5 153 62-245 25-187 (253)
390 PF12234 Rav1p_C: RAVE protein 96.9 0.084 1.8E-06 46.2 15.5 110 175-295 31-155 (631)
391 PF10168 Nup88: Nuclear pore c 96.9 0.29 6.4E-06 44.0 19.0 94 58-158 82-181 (717)
392 PF10313 DUF2415: Uncharacteri 96.8 0.0052 1.1E-07 32.4 4.7 31 224-254 2-34 (43)
393 KOG3630 Nuclear pore complex, 96.8 0.031 6.7E-07 51.0 12.2 140 135-284 109-262 (1405)
394 KOG3630 Nuclear pore complex, 96.8 0.013 2.9E-07 53.2 9.8 120 175-296 102-228 (1405)
395 KOG1916 Nuclear protein, conta 96.7 0.0029 6.2E-08 55.9 5.3 146 147-302 152-329 (1283)
396 PF07995 GSDH: Glucose / Sorbo 96.7 0.13 2.7E-06 41.9 14.2 108 175-284 3-132 (331)
397 PHA03098 kelch-like protein; P 96.7 0.31 6.6E-06 42.7 17.3 146 137-299 342-514 (534)
398 COG3490 Uncharacterized protei 96.6 0.062 1.3E-06 41.5 10.9 103 175-284 69-180 (366)
399 PF04841 Vps16_N: Vps16, N-ter 96.6 0.34 7.5E-06 40.7 20.9 54 222-276 216-270 (410)
400 PF14727 PHTB1_N: PTHB1 N-term 96.6 0.34 7.3E-06 40.5 17.9 151 137-295 36-203 (418)
401 KOG4499 Ca2+-binding protein R 96.6 0.2 4.3E-06 37.7 15.2 98 176-274 160-262 (310)
402 KOG2079 Vacuolar assembly/sort 96.6 0.2 4.2E-06 45.9 15.3 105 71-202 98-203 (1206)
403 PF10647 Gmad1: Lipoprotein Lp 96.6 0.25 5.5E-06 38.5 15.8 146 132-290 29-190 (253)
404 PF14870 PSII_BNR: Photosynthe 96.5 0.29 6.4E-06 39.0 20.2 159 57-250 141-301 (302)
405 PF08728 CRT10: CRT10; InterP 96.5 0.36 7.7E-06 42.9 16.4 111 137-252 113-245 (717)
406 PF12234 Rav1p_C: RAVE protein 96.5 0.17 3.6E-06 44.4 14.0 120 60-203 29-157 (631)
407 KOG4441 Proteins containing BT 96.4 0.39 8.5E-06 42.2 16.0 146 137-299 380-549 (571)
408 COG3823 Glutamine cyclotransfe 96.4 0.26 5.6E-06 36.4 14.3 177 71-284 55-247 (262)
409 PF05694 SBP56: 56kDa selenium 96.3 0.52 1.1E-05 39.1 15.0 136 146-284 220-392 (461)
410 PRK13684 Ycf48-like protein; P 96.2 0.52 1.1E-05 38.5 16.9 113 175-296 216-331 (334)
411 PF13449 Phytase-like: Esteras 96.2 0.51 1.1E-05 38.4 16.3 172 59-240 18-231 (326)
412 KOG2247 WD40 repeat-containing 96.2 0.00055 1.2E-08 56.0 -1.8 131 135-281 43-175 (615)
413 TIGR03075 PQQ_enz_alc_DH PQQ-d 96.2 0.75 1.6E-05 40.2 20.9 56 245-302 441-496 (527)
414 KOG1900 Nuclear pore complex, 96.0 0.24 5.2E-06 46.3 13.1 169 63-254 81-273 (1311)
415 TIGR03118 PEPCTERM_chp_1 conse 96.0 0.57 1.2E-05 36.9 21.2 223 62-301 24-284 (336)
416 PF10313 DUF2415: Uncharacteri 96.0 0.042 9.2E-07 29.0 5.0 31 266-297 1-34 (43)
417 KOG2444 WD40 repeat protein [G 95.9 0.059 1.3E-06 40.1 7.3 106 71-202 69-177 (238)
418 PF14761 HPS3_N: Hermansky-Pud 95.8 0.54 1.2E-05 35.0 15.2 146 139-296 29-214 (215)
419 PF14583 Pectate_lyase22: Olig 95.8 0.88 1.9E-05 37.4 18.7 150 135-299 89-275 (386)
420 KOG4441 Proteins containing BT 95.7 1.2 2.7E-05 39.2 16.0 146 137-299 332-502 (571)
421 PF14583 Pectate_lyase22: Olig 95.6 1 2.2E-05 37.0 14.6 141 130-284 39-206 (386)
422 PF07569 Hira: TUP1-like enhan 95.6 0.14 3.1E-06 38.7 8.7 68 136-203 20-96 (219)
423 PF07569 Hira: TUP1-like enhan 95.6 0.16 3.5E-06 38.5 9.0 63 234-298 21-97 (219)
424 PF07995 GSDH: Glucose / Sorbo 95.5 1.1 2.4E-05 36.6 15.1 112 129-243 4-133 (331)
425 PF14781 BBS2_N: Ciliary BBSom 95.4 0.5 1.1E-05 32.2 13.0 121 64-203 2-126 (136)
426 PF10168 Nup88: Nuclear pore c 95.4 0.77 1.7E-05 41.5 13.8 75 224-300 86-183 (717)
427 PF12657 TFIIIC_delta: Transcr 95.3 0.73 1.6E-05 33.5 12.5 36 121-157 87-122 (173)
428 KOG4499 Ca2+-binding protein R 95.2 1 2.2E-05 34.1 14.5 117 175-302 110-247 (310)
429 PF05096 Glu_cyclase_2: Glutam 95.1 1.2 2.6E-05 34.6 16.8 146 136-301 54-208 (264)
430 TIGR03606 non_repeat_PQQ dehyd 95.1 1.8 4E-05 36.7 18.0 58 128-185 31-90 (454)
431 PLN00033 photosystem II stabil 95.0 1.8 3.8E-05 36.3 17.6 110 175-293 282-396 (398)
432 PHA02790 Kelch-like protein; P 95.0 2.1 4.5E-05 37.0 18.1 144 137-300 318-474 (480)
433 KOG4460 Nuclear pore complex, 95.0 0.45 9.7E-06 40.2 10.3 75 225-301 106-203 (741)
434 TIGR03074 PQQ_membr_DH membran 95.0 2.9 6.3E-05 38.3 22.3 221 71-302 193-483 (764)
435 PF07676 PD40: WD40-like Beta 94.9 0.17 3.8E-06 26.1 5.4 30 264-293 7-38 (39)
436 KOG1916 Nuclear protein, conta 94.8 0.018 3.9E-07 51.2 2.1 99 194-295 153-264 (1283)
437 PHA02713 hypothetical protein; 94.7 1.4 3E-05 38.9 13.4 144 137-297 303-489 (557)
438 TIGR02604 Piru_Ver_Nterm putat 94.7 2 4.3E-05 35.7 13.7 103 175-284 15-142 (367)
439 PF08728 CRT10: CRT10; InterP 94.7 3.1 6.8E-05 37.3 16.1 165 127-295 39-245 (717)
440 PF12657 TFIIIC_delta: Transcr 94.7 0.33 7.1E-06 35.3 8.1 31 224-254 87-122 (173)
441 PRK13684 Ycf48-like protein; P 94.5 2.2 4.7E-05 34.9 15.3 106 175-291 174-283 (334)
442 PF14781 BBS2_N: Ciliary BBSom 94.4 1 2.2E-05 30.8 13.0 111 135-261 7-133 (136)
443 PRK10115 protease 2; Provision 94.4 3.4 7.4E-05 37.6 15.4 111 175-295 128-254 (686)
444 KOG2377 Uncharacterized conser 94.3 2.1 4.6E-05 35.8 12.4 117 174-297 67-186 (657)
445 PHA03098 kelch-like protein; P 94.3 1.8 3.9E-05 38.0 13.3 146 137-299 294-467 (534)
446 TIGR02276 beta_rpt_yvtn 40-res 94.2 0.37 7.9E-06 25.2 5.7 41 232-273 1-41 (42)
447 PF10214 Rrn6: RNA polymerase 94.0 5 0.00011 37.1 17.0 123 175-300 81-236 (765)
448 PF02333 Phytase: Phytase; In 93.9 3.1 6.8E-05 34.4 18.0 156 135-296 65-237 (381)
449 KOG1897 Damage-specific DNA bi 93.9 5.3 0.00012 36.9 21.8 73 225-301 777-861 (1096)
450 PF14655 RAB3GAP2_N: Rab3 GTPa 93.6 1.7 3.7E-05 36.4 11.0 43 53-95 300-342 (415)
451 PLN00033 photosystem II stabil 93.4 4.2 9E-05 34.1 17.3 114 120-250 281-396 (398)
452 COG5290 IkappaB kinase complex 93.2 5.9 0.00013 35.9 13.8 92 178-277 251-348 (1243)
453 KOG4460 Nuclear pore complex, 93.0 1.2 2.6E-05 37.8 9.1 97 61-161 104-203 (741)
454 PF11715 Nup160: Nucleoporin N 93.0 0.61 1.3E-05 41.0 8.2 67 234-301 157-253 (547)
455 KOG2280 Vacuolar assembly/sort 92.8 7 0.00015 35.1 13.9 50 148-203 64-113 (829)
456 TIGR03606 non_repeat_PQQ dehyd 92.6 5.9 0.00013 33.8 14.1 108 175-284 31-164 (454)
457 PF03088 Str_synth: Strictosid 92.4 1.3 2.9E-05 28.0 6.9 42 144-191 33-74 (89)
458 TIGR02276 beta_rpt_yvtn 40-res 92.3 0.42 9.1E-06 25.0 4.1 27 275-301 1-27 (42)
459 PF07676 PD40: WD40-like Beta 92.3 0.86 1.9E-05 23.4 5.4 32 56-87 4-38 (39)
460 PF13449 Phytase-like: Esteras 92.2 5.4 0.00012 32.5 16.5 105 175-282 86-231 (326)
461 TIGR03074 PQQ_membr_DH membran 91.9 4.8 0.0001 37.0 12.3 65 236-301 261-349 (764)
462 PF12768 Rax2: Cortical protei 91.9 5.3 0.00012 31.7 12.9 102 149-260 17-130 (281)
463 PHA02790 Kelch-like protein; P 91.8 8.1 0.00018 33.5 14.3 104 137-256 362-473 (480)
464 PRK10115 protease 2; Provision 91.8 10 0.00022 34.6 23.3 111 62-203 128-256 (686)
465 COG5276 Uncharacterized conser 91.5 5.8 0.00013 31.3 18.5 146 137-299 95-244 (370)
466 COG4257 Vgb Streptogramin lyas 91.0 6.3 0.00014 30.8 14.4 152 133-298 68-220 (353)
467 PF03022 MRJP: Major royal jel 90.8 7.1 0.00015 31.1 17.4 137 145-284 85-254 (287)
468 TIGR03118 PEPCTERM_chp_1 conse 90.8 7.2 0.00016 31.1 13.0 121 131-253 27-170 (336)
469 PF14761 HPS3_N: Hermansky-Pud 90.3 1.7 3.7E-05 32.5 6.7 48 236-284 29-78 (215)
470 PF11715 Nup160: Nucleoporin N 90.0 2.2 4.8E-05 37.6 8.5 37 225-261 217-256 (547)
471 PF10214 Rrn6: RNA polymerase 89.4 18 0.00039 33.6 23.9 182 58-254 77-277 (765)
472 PF01731 Arylesterase: Arylest 89.0 3.7 7.9E-05 25.8 6.5 50 245-297 36-85 (86)
473 COG4590 ABC-type uncharacteriz 88.9 4.2 9.2E-05 34.1 8.5 156 134-298 228-388 (733)
474 COG5167 VID27 Protein involved 88.9 1.6 3.4E-05 37.1 6.1 62 137-203 572-633 (776)
475 KOG1900 Nuclear pore complex, 88.8 10 0.00022 36.4 11.6 144 145-297 96-273 (1311)
476 KOG2247 WD40 repeat-containing 88.6 0.06 1.3E-06 44.7 -1.9 137 59-235 33-171 (615)
477 PF09826 Beta_propel: Beta pro 88.6 16 0.00035 32.0 18.4 161 117-298 323-520 (521)
478 KOG3616 Selective LIM binding 88.4 5.2 0.00011 35.9 9.2 112 60-201 14-125 (1636)
479 KOG3522 Predicted guanine nucl 88.2 2.6 5.6E-05 38.0 7.3 148 140-298 549-699 (925)
480 PF14727 PHTB1_N: PTHB1 N-term 88.0 15 0.00033 31.0 20.0 59 236-297 301-361 (418)
481 KOG2377 Uncharacterized conser 87.8 16 0.00034 31.0 13.1 111 114-240 61-171 (657)
482 COG5308 NUP170 Nuclear pore co 87.7 24 0.00051 32.8 13.9 78 175-254 183-276 (1263)
483 PRK14131 N-acetylneuraminic ac 87.6 15 0.00033 30.6 16.3 54 247-302 314-374 (376)
484 PF02333 Phytase: Phytase; In 87.3 16 0.00034 30.4 23.7 144 148-298 127-292 (381)
485 PF03022 MRJP: Major royal jel 87.1 14 0.0003 29.6 15.9 145 149-297 35-216 (287)
486 KOG1898 Splicing factor 3b, su 86.9 28 0.00061 32.9 12.9 124 149-284 854-993 (1205)
487 PF08801 Nucleoporin_N: Nup133 86.6 19 0.00041 30.6 14.7 30 267-297 191-220 (422)
488 PLN02153 epithiospecifier prot 86.0 18 0.00038 29.7 21.0 25 137-161 85-114 (341)
489 smart00564 PQQ beta-propeller 86.0 2.4 5.1E-05 20.6 3.8 25 237-261 8-32 (33)
490 KOG1983 Tomosyn and related SN 86.0 33 0.00072 32.9 14.0 30 61-90 36-65 (993)
491 KOG1896 mRNA cleavage and poly 85.9 34 0.00075 32.9 15.8 103 137-252 1107-1212(1366)
492 PF03088 Str_synth: Strictosid 85.3 7.3 0.00016 24.7 7.5 42 242-284 34-75 (89)
493 PF12768 Rax2: Cortical protei 84.7 18 0.00039 28.7 11.2 78 194-281 16-105 (281)
494 PF07250 Glyoxal_oxid_N: Glyox 84.4 17 0.00037 28.2 11.7 140 152-301 50-202 (243)
495 PLN02193 nitrile-specifier pro 84.1 27 0.00059 30.3 20.6 63 234-299 328-413 (470)
496 TIGR03547 muta_rot_YjhT mutatr 83.6 23 0.0005 29.1 13.4 14 148-161 168-181 (346)
497 PF01731 Arylesterase: Arylest 83.4 7.4 0.00016 24.5 5.9 28 175-202 55-84 (86)
498 PF14779 BBS1: Ciliary BBSome 83.3 17 0.00038 28.3 8.9 78 120-199 177-255 (257)
499 PF11635 Med16: Mediator compl 83.1 40 0.00086 31.4 16.1 74 174-248 260-345 (753)
500 TIGR03054 photo_alph_chp1 puta 83.1 7.4 0.00016 26.8 6.1 64 237-301 43-118 (135)
No 1
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=3.4e-41 Score=256.96 Aligned_cols=224 Identities=21% Similarity=0.316 Sum_probs=195.5
Q ss_pred cHHhhccccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccc
Q 022019 22 TEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNAC 101 (304)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 101 (304)
..+++.|...++|. ......+ ..+.+|...|..++|+|+|++|+|++.|.+-++||+.++....
T Consensus 234 lat~s~Dgtvklw~-----~~~e~~l------~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL----- 297 (459)
T KOG0272|consen 234 LATASADGTVKLWK-----LSQETPL------QDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELL----- 297 (459)
T ss_pred eeeeccCCceeeec-----cCCCcch------hhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhH-----
Confidence 44556666666654 3443333 3788999999999999999999999999999999998765432
Q ss_pred cccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEE
Q 022019 102 SLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAF 181 (304)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~ 181 (304)
...+|...|++++| .+||.++++|+.|..-+|||+++|.++..+..|.. +|.+++|
T Consensus 298 ------------~QEGHs~~v~~iaf-------~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k-----~I~~V~f 353 (459)
T KOG0272|consen 298 ------------LQEGHSKGVFSIAF-------QPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIK-----EILSVAF 353 (459)
T ss_pred ------------hhcccccccceeEe-------cCCCceeeccCccchhheeecccCcEEEEeccccc-----ceeeEeE
Confidence 33456689999988 77999999999999999999999999999987765 9999999
Q ss_pred CCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEE
Q 022019 182 NPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYV 260 (304)
Q Consensus 182 ~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 260 (304)
+|+|..+++| .|++++|||++... ......+|...|+.++|+|..+.+|++++.|++++||..+++.++.+
T Consensus 354 sPNGy~lATgs~Dnt~kVWDLR~r~--------~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ks 425 (459)
T KOG0272|consen 354 SPNGYHLATGSSDNTCKVWDLRMRS--------ELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKS 425 (459)
T ss_pred CCCceEEeecCCCCcEEEeeecccc--------cceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcccchh
Confidence 9999999976 99999999999732 23334889999999999998899999999999999999999999999
Q ss_pred eccccCCeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 261 LHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 261 ~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
+.||++.|.++..+||+.++++++ .|.++++|.
T Consensus 426 LaGHe~kV~s~Dis~d~~~i~t~s-~DRT~KLW~ 458 (459)
T KOG0272|consen 426 LAGHEGKVISLDISPDSQAIATSS-FDRTIKLWR 458 (459)
T ss_pred hcCCccceEEEEeccCCceEEEec-cCceeeecc
Confidence 999999999999999999999999 999999995
No 2
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=2.6e-39 Score=244.06 Aligned_cols=235 Identities=20% Similarity=0.376 Sum_probs=195.0
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
.+..||+....+.. +.++|...|.|++|+|||+.||+|+.||+|++||.++++... ..
T Consensus 138 TvR~WD~~TeTp~~------t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g----------------~~ 195 (480)
T KOG0271|consen 138 TVRLWDLDTETPLF------TCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIG----------------RA 195 (480)
T ss_pred eEEeeccCCCCcce------eecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCccc----------------cc
Confidence 45567766665554 789999999999999999999999999999999998765432 24
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d 193 (304)
+.+|...|++++|.|... .|..++|++++.||.|+|||+..+.++..+..|.. +|+|+.|--+| +|++| .|
T Consensus 196 l~gH~K~It~Lawep~hl--~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~-----~VTCvrwGG~g-liySgS~D 267 (480)
T KOG0271|consen 196 LRGHKKWITALAWEPLHL--VPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTA-----SVTCVRWGGEG-LIYSGSQD 267 (480)
T ss_pred ccCcccceeEEeeccccc--CCCccceecccCCCCEEEEEccCceEEEEeccCcc-----ceEEEEEcCCc-eEEecCCC
Confidence 556778999999999755 67888999999999999999999999988887776 99999997654 55554 99
Q ss_pred CeEEEEEcCCCC--------------------------------cccee-------------------------------
Q 022019 194 KSVRVFDVHRPG--------------------------------RDFEK------------------------------- 210 (304)
Q Consensus 194 ~~i~v~d~~~~~--------------------------------~~~~~------------------------------- 210 (304)
++|++|+...+. ...+.
T Consensus 268 rtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~t 347 (480)
T KOG0271|consen 268 RTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFT 347 (480)
T ss_pred ceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCce
Confidence 999999875421 00000
Q ss_pred --------eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEE
Q 022019 211 --------YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYT 282 (304)
Q Consensus 211 --------~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 282 (304)
.........+|...|..+.|+| +++++++++.|..|++||.++|+-+.+|++|-..|+.++|+.|.+.|++
T Consensus 348 lflW~p~~~kkpi~rmtgHq~lVn~V~fSP-d~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS 426 (480)
T KOG0271|consen 348 LFLWNPFKSKKPITRMTGHQALVNHVSFSP-DGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVS 426 (480)
T ss_pred EEEecccccccchhhhhchhhheeeEEECC-CccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEE
Confidence 0001123467888899999999 8889999999999999999999999999999999999999999999999
Q ss_pred eeccCCeEEEEecccceee
Q 022019 283 GGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 283 ~~~~d~~i~vwd~~~~~~~ 301 (304)
|+ .|.++++|++++.+..
T Consensus 427 ~S-kDsTLKvw~V~tkKl~ 444 (480)
T KOG0271|consen 427 GS-KDSTLKVWDVRTKKLK 444 (480)
T ss_pred cC-CCceEEEEEeeeeeec
Confidence 99 9999999999987643
No 3
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=1.5e-37 Score=226.73 Aligned_cols=256 Identities=14% Similarity=0.191 Sum_probs=196.0
Q ss_pred HHHHhhcCCCchhhcHHhhccccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEe
Q 022019 8 QTLQQQQIYSDTEVTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIF 87 (304)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vw 87 (304)
+++++++.+++...+........+.....+.-++.+..... .+..++++||.+.|.++.|++|.+++++++.||.+.||
T Consensus 4 ~~~l~~Eae~L~~qi~~~r~~~~D~~l~q~a~~~~~~~~i~-~~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvW 82 (343)
T KOG0286|consen 4 LEQLRQEAEQLKNQIRDARKKLNDVTLAQIAERLESVGRIQ-MRTRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVW 82 (343)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccHHHHhhccccceeee-eeeEEEecccccceeeeEecCCcCeEEeeccCCeEEEE
Confidence 34455555555555555444433332211112222222222 34457999999999999999999999999999999999
Q ss_pred eCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCC------eee
Q 022019 88 SLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTG------LLR 161 (304)
Q Consensus 88 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~------~~~ 161 (304)
|.-+......+.. ...-|..++| +|.|+++|+|+-|....||++.+. ...
T Consensus 83 Ds~TtnK~haipl-----------------~s~WVMtCA~-------sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~ 138 (343)
T KOG0286|consen 83 DSFTTNKVHAIPL-----------------PSSWVMTCAY-------SPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVS 138 (343)
T ss_pred EcccccceeEEec-----------------CceeEEEEEE-------CCCCCeEEecCcCceeEEEecccccccccceee
Confidence 9876543322221 1244555555 889999999999999999999854 223
Q ss_pred EEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEE
Q 022019 162 CTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIG 241 (304)
Q Consensus 162 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~ 241 (304)
..+..|. ..+.++.|-+|+..|.++.|.+..+||++++ .....+.+|.+.|.+++++|.+++.+++|
T Consensus 139 r~l~gHt-----gylScC~f~dD~~ilT~SGD~TCalWDie~g--------~~~~~f~GH~gDV~slsl~p~~~ntFvSg 205 (343)
T KOG0286|consen 139 RELAGHT-----GYLSCCRFLDDNHILTGSGDMTCALWDIETG--------QQTQVFHGHTGDVMSLSLSPSDGNTFVSG 205 (343)
T ss_pred eeecCcc-----ceeEEEEEcCCCceEecCCCceEEEEEcccc--------eEEEEecCCcccEEEEecCCCCCCeEEec
Confidence 3444444 4888999988776666679999999999884 22333479999999999999888899999
Q ss_pred ecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceeee
Q 022019 242 SYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 242 ~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
+-|+..++||++.+.++++|.+|+..|+++.|.|+|.-+++|+ +|++.++||++..+++.
T Consensus 206 ~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGS-DD~tcRlyDlRaD~~~a 265 (343)
T KOG0286|consen 206 GCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGS-DDATCRLYDLRADQELA 265 (343)
T ss_pred ccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecC-CCceeEEEeecCCcEEe
Confidence 9999999999999999999999999999999999999999999 99999999999987764
No 4
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=3.1e-39 Score=246.30 Aligned_cols=210 Identities=22% Similarity=0.313 Sum_probs=183.2
Q ss_pred eeeecCCCCceeEEEEcCC--CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 53 FRTSSIPNNFLKGIKWSPD--GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~--~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
+..+.+|.+.|.++.|+|. +..+|||+.||++++|++.+...... ..+|...|..++|
T Consensus 210 ~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~-----------------l~gH~~RVs~Vaf--- 269 (459)
T KOG0272|consen 210 LQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQD-----------------LEGHLARVSRVAF--- 269 (459)
T ss_pred eEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhh-----------------hhcchhhheeeee---
Confidence 4489999999999999995 66899999999999999986544332 3345577888877
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccce
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~ 209 (304)
+|+|++|++++.|.+-++||++++......++|.. .|.+++|+|||.++++| .|..-+|||+|++.
T Consensus 270 ----HPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~-----~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr---- 336 (459)
T KOG0272|consen 270 ----HPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSK-----GVFSIAFQPDGSLAATGGLDSLGRVWDLRTGR---- 336 (459)
T ss_pred ----cCCCceeeecccccchhhcccccchhhHhhccccc-----ccceeEecCCCceeeccCccchhheeecccCc----
Confidence 77999999999999999999999987777776665 99999999999999965 99999999999852
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECC-CCcEEEEeeccCC
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSR-DGNYLYTGGRKDP 288 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~d~ 288 (304)
.+.. +.+|..+|.+++|+| +|..|++|+.|++++|||++...++.++.+|..-|+.+.|+| .|.+|+|++ .|+
T Consensus 337 ~im~----L~gH~k~I~~V~fsP-NGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~Tas-yD~ 410 (459)
T KOG0272|consen 337 CIMF----LAGHIKEILSVAFSP-NGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTAS-YDN 410 (459)
T ss_pred EEEE----ecccccceeeEeECC-CceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcc-cCc
Confidence 2222 277999999999999 899999999999999999999999999999999999999999 788999999 999
Q ss_pred eEEEEecccceee
Q 022019 289 YILCWDLRKAVQV 301 (304)
Q Consensus 289 ~i~vwd~~~~~~~ 301 (304)
++++|...+..++
T Consensus 411 t~kiWs~~~~~~~ 423 (459)
T KOG0272|consen 411 TVKIWSTRTWSPL 423 (459)
T ss_pred ceeeecCCCcccc
Confidence 9999999887554
No 5
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=2.2e-38 Score=258.87 Aligned_cols=208 Identities=28% Similarity=0.428 Sum_probs=185.5
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
.+.+.||.++|....|+|+.++|++|+.|+++|+|.+.+... .....+|..+|+++.|
T Consensus 444 ~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~-----------------~V~y~GH~~PVwdV~F----- 501 (707)
T KOG0263|consen 444 SRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSC-----------------LVIYKGHLAPVWDVQF----- 501 (707)
T ss_pred eEEeecCCCceeeeeecccccceeeccCCcceeeeeccccee-----------------EEEecCCCcceeeEEe-----
Confidence 446889999999999999999999999999999999985432 2244577789999988
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceee
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
+|-|-+||+++.|++.++|......+.+.+..|.. .|.|+.|+|+..++++| .|.+|++||+.++.
T Consensus 502 --~P~GyYFatas~D~tArLWs~d~~~PlRifaghls-----DV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~------ 568 (707)
T KOG0263|consen 502 --APRGYYFATASHDQTARLWSTDHNKPLRIFAGHLS-----DVDCVSFHPNSNYVATGSSDRTVRLWDVSTGN------ 568 (707)
T ss_pred --cCCceEEEecCCCceeeeeecccCCchhhhccccc-----ccceEEECCcccccccCCCCceEEEEEcCCCc------
Confidence 66788999999999999999998888888887765 89999999999999977 99999999998742
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEE
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYIL 291 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~ 291 (304)
....+.||.++|.+++|+| .|++|++|+.||.|++||+.+++++..+.+|.+.|.++.|+.+|..|++|| .|++|+
T Consensus 569 --~VRiF~GH~~~V~al~~Sp-~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg-~DnsV~ 644 (707)
T KOG0263|consen 569 --SVRIFTGHKGPVTALAFSP-CGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGG-ADNSVR 644 (707)
T ss_pred --EEEEecCCCCceEEEEEcC-CCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecC-CCCeEE
Confidence 2233378999999999999 899999999999999999999999999999999999999999999999999 999999
Q ss_pred EEecccce
Q 022019 292 CWDLRKAV 299 (304)
Q Consensus 292 vwd~~~~~ 299 (304)
+||+....
T Consensus 645 lWD~~~~~ 652 (707)
T KOG0263|consen 645 LWDLTKVI 652 (707)
T ss_pred EEEchhhc
Confidence 99997643
No 6
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=7.1e-38 Score=236.36 Aligned_cols=211 Identities=23% Similarity=0.378 Sum_probs=170.2
Q ss_pred ceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 51 NQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
+....+.||.++|.|++|+|+|..|+||+.|.++|+||+.+..... ...+|..-|.+++|
T Consensus 106 rCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~-----------------t~KgH~~WVlcvaw--- 165 (480)
T KOG0271|consen 106 RCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLF-----------------TCKGHKNWVLCVAW--- 165 (480)
T ss_pred eeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcce-----------------eecCCccEEEEEEE---
Confidence 4555889999999999999999999999999999999998764432 34456688999998
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCCeee-EEeecccccccccceEEEEECC-----CCcEEEEE-cCCeEEEEEcCC
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTGLLR-CTYRAYDAVDEITAAFSVAFNP-----TGTKIFAG-YNKSVRVFDVHR 203 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~~~v~~i~~~~-----~~~~l~~~-~d~~i~v~d~~~ 203 (304)
+|||+.||+|+.||+|++||.++|+.. ..+..|.. .|++++|.| ..++++++ .||.|+|||+..
T Consensus 166 ----sPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K-----~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~ 236 (480)
T KOG0271|consen 166 ----SPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKK-----WITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKL 236 (480)
T ss_pred ----CCCcchhhccccCCeEEEecCCCCCcccccccCccc-----ceeEEeecccccCCCccceecccCCCCEEEEEccC
Confidence 889999999999999999999988765 44555554 999999976 45788854 999999999976
Q ss_pred CCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc----------------------------
Q 022019 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM---------------------------- 255 (304)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~---------------------------- 255 (304)
+ .......+|..+|+|+.|-. ..+|++|+.|++|++|+...+
T Consensus 237 ~--------~~~~~lsgHT~~VTCvrwGG--~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtga 306 (480)
T KOG0271|consen 237 G--------TCVRTLSGHTASVTCVRWGG--EGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGA 306 (480)
T ss_pred c--------eEEEEeccCccceEEEEEcC--CceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccc
Confidence 2 22223367888888888864 337778888888888865432
Q ss_pred ---------------------------------------------------eEeEEeccccCCeEEEEECCCCcEEEEee
Q 022019 256 ---------------------------------------------------ELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 256 ---------------------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
+++..+.+|..-|+.+.||||+++|++++
T Consensus 307 f~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaS 386 (480)
T KOG0271|consen 307 FDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASAS 386 (480)
T ss_pred cccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEee
Confidence 23334557888899999999999999999
Q ss_pred ccCCeEEEEecccceee
Q 022019 285 RKDPYILCWDLRKAVQV 301 (304)
Q Consensus 285 ~~d~~i~vwd~~~~~~~ 301 (304)
.|..|++|+.++|+.+
T Consensus 387 -FDkSVkLW~g~tGk~l 402 (480)
T KOG0271|consen 387 -FDKSVKLWDGRTGKFL 402 (480)
T ss_pred -cccceeeeeCCCcchh
Confidence 9999999999999765
No 7
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-37 Score=224.15 Aligned_cols=236 Identities=21% Similarity=0.351 Sum_probs=190.0
Q ss_pred hhcHHhhccccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccc
Q 022019 20 EVTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVN 99 (304)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~ 99 (304)
+...+++.++..-.|. +... ...+-...+.+.||...|..+..++||+++++++.|+++++||+.+++
T Consensus 29 ~~l~sasrDk~ii~W~-----L~~d-d~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~------ 96 (315)
T KOG0279|consen 29 DILVSASRDKTIIVWK-----LTSD-DIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGE------ 96 (315)
T ss_pred ceEEEcccceEEEEEE-----eccC-ccccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCc------
Confidence 3344455555555554 3322 222334556889999999999999999999999999999999998642
Q ss_pred cccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEE
Q 022019 100 ACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSV 179 (304)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i 179 (304)
....+.+|...|.++++ ++|.+.+++|+.|++|++|+...+ +..++.... +...|.++
T Consensus 97 -----------~t~~f~GH~~dVlsva~-------s~dn~qivSGSrDkTiklwnt~g~-ck~t~~~~~---~~~WVscv 154 (315)
T KOG0279|consen 97 -----------STRRFVGHTKDVLSVAF-------STDNRQIVSGSRDKTIKLWNTLGV-CKYTIHEDS---HREWVSCV 154 (315)
T ss_pred -----------EEEEEEecCCceEEEEe-------cCCCceeecCCCcceeeeeeeccc-EEEEEecCC---CcCcEEEE
Confidence 23467788899999977 889999999999999999998754 333333322 13489999
Q ss_pred EECCC--CcEEE-EEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce
Q 022019 180 AFNPT--GTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME 256 (304)
Q Consensus 180 ~~~~~--~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~ 256 (304)
.|+|+ ..+|+ +|.|++|++||++. ..+.....+|.+.++.++++| +|.++++|+.||.+.+||++.++
T Consensus 155 rfsP~~~~p~Ivs~s~DktvKvWnl~~--------~~l~~~~~gh~~~v~t~~vSp-DGslcasGgkdg~~~LwdL~~~k 225 (315)
T KOG0279|consen 155 RFSPNESNPIIVSASWDKTVKVWNLRN--------CQLRTTFIGHSGYVNTVTVSP-DGSLCASGGKDGEAMLWDLNEGK 225 (315)
T ss_pred EEcCCCCCcEEEEccCCceEEEEccCC--------cchhhccccccccEEEEEECC-CCCEEecCCCCceEEEEEccCCc
Confidence 99998 56777 56999999999987 556666688999999999999 78899999999999999999999
Q ss_pred EeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 257 LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 257 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
.+.++. |...|.+++|+|+..+|+.+. +..|+|||+.++..+
T Consensus 226 ~lysl~-a~~~v~sl~fspnrywL~~at--~~sIkIwdl~~~~~v 267 (315)
T KOG0279|consen 226 NLYSLE-AFDIVNSLCFSPNRYWLCAAT--ATSIKIWDLESKAVV 267 (315)
T ss_pred eeEecc-CCCeEeeEEecCCceeEeecc--CCceEEEeccchhhh
Confidence 988886 788999999999988887765 667999999988765
No 8
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=2.4e-36 Score=215.89 Aligned_cols=231 Identities=22% Similarity=0.265 Sum_probs=188.7
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
.+..+|+...... +...+.+|++.|+.+.|..+|++++||+.||+++|||++.... .-
T Consensus 62 hvRlyD~~S~np~----Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~------------------qR 119 (311)
T KOG0315|consen 62 HVRLYDLNSNNPN----PVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSC------------------QR 119 (311)
T ss_pred eeEEEEccCCCCC----ceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCccc------------------ch
Confidence 3445555544332 3458899999999999999999999999999999999985322 13
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d 193 (304)
.+.+..+|.++.. +|+...|++|..+|.|++||+....+...+..... ..|.++...|||.+++++ ..
T Consensus 120 ~~~~~spVn~vvl-------hpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~----~~i~sl~v~~dgsml~a~nnk 188 (311)
T KOG0315|consen 120 NYQHNSPVNTVVL-------HPNQTELISGDQSGNIRVWDLGENSCTHELIPEDD----TSIQSLTVMPDGSMLAAANNK 188 (311)
T ss_pred hccCCCCcceEEe-------cCCcceEEeecCCCcEEEEEccCCccccccCCCCC----cceeeEEEcCCCcEEEEecCC
Confidence 3445578888877 55677899999999999999998766655543332 389999999999999977 88
Q ss_pred CeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc-eEeEEeccccCCeEEEE
Q 022019 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM-ELLYVLHGQEGGVTHVQ 272 (304)
Q Consensus 194 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~~~ 272 (304)
|..++|++-... ......+...+..|.+.+..+.+|| +.++|++++.|.+++||+.++. +....+.+|..++..++
T Consensus 189 G~cyvW~l~~~~--~~s~l~P~~k~~ah~~~il~C~lSP-d~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~ 265 (311)
T KOG0315|consen 189 GNCYVWRLLNHQ--TASELEPVHKFQAHNGHILRCLLSP-DVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCA 265 (311)
T ss_pred ccEEEEEccCCC--ccccceEhhheecccceEEEEEECC-CCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeee
Confidence 999999997632 1222333445688999999999999 8889999999999999999887 67778889999999999
Q ss_pred ECCCCcEEEEeeccCCeEEEEecccceeee
Q 022019 273 FSRDGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 273 ~~~~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
||.||.||++|+ .|+.+++|+++.++.+.
T Consensus 266 FS~dg~YlvTas-sd~~~rlW~~~~~k~v~ 294 (311)
T KOG0315|consen 266 FSADGEYLVTAS-SDHTARLWDLSAGKEVR 294 (311)
T ss_pred eccCccEEEecC-CCCceeecccccCceee
Confidence 999999999999 99999999999998764
No 9
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-36 Score=218.65 Aligned_cols=219 Identities=21% Similarity=0.340 Sum_probs=184.9
Q ss_pred eeeecCCCCceeEEEEcCC-CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 53 FRTSSIPNNFLKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
..++++|++.|+.++..+. ...+++++.|.++.+|++...... .........+|...|..+..
T Consensus 8 ~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~------------~G~~~r~~~GHsH~v~dv~~---- 71 (315)
T KOG0279|consen 8 RGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIK------------YGVPVRRLTGHSHFVSDVVL---- 71 (315)
T ss_pred eeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccc------------cCceeeeeeccceEecceEE----
Confidence 3478999999999999985 568899999999999999754211 12222344557777777755
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCcccee
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~ 210 (304)
+++|+++++++.|+++++||+.+++..+.+..|.. .|.+++|+||++.|++| .|.+|++|++...
T Consensus 72 ---s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~-----dVlsva~s~dn~qivSGSrDkTiklwnt~g~------ 137 (315)
T KOG0279|consen 72 ---SSDGNFALSASWDGTLRLWDLATGESTRRFVGHTK-----DVLSVAFSTDNRQIVSGSRDKTIKLWNTLGV------ 137 (315)
T ss_pred ---ccCCceEEeccccceEEEEEecCCcEEEEEEecCC-----ceEEEEecCCCceeecCCCcceeeeeeeccc------
Confidence 88999999999999999999999999999998776 99999999999999977 9999999999752
Q ss_pred eeeeeccccccccceeEEEeecCC-CcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCe
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTH-TGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPY 289 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~ 289 (304)
.........+.+.|.++.|+|+. ..+|++++.|++|++||+++.+....+.+|.+.++.+.+||||..+++|+ .||.
T Consensus 138 -ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGg-kdg~ 215 (315)
T KOG0279|consen 138 -CKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGG-KDGE 215 (315)
T ss_pred -EEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCC-CCce
Confidence 12222223347899999999953 67999999999999999999999999999999999999999999999999 9999
Q ss_pred EEEEecccceeeee
Q 022019 290 ILCWDLRKAVQVVY 303 (304)
Q Consensus 290 i~vwd~~~~~~~~~ 303 (304)
+.+||++.++.+.+
T Consensus 216 ~~LwdL~~~k~lys 229 (315)
T KOG0279|consen 216 AMLWDLNEGKNLYS 229 (315)
T ss_pred EEEEEccCCceeEe
Confidence 99999999988643
No 10
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=4.7e-35 Score=239.51 Aligned_cols=226 Identities=21% Similarity=0.350 Sum_probs=191.0
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCc--------ccc------ccccccccCCccceEEEeecCC
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGIS--------YDV------NACSLAKDQDSYEASLVVTEGE 120 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~--------~~~------~~~~~~~~~~~~~~~~~~~~~~ 120 (304)
++..-...++|..|++|++.||.|-.|..|++|.+...++. ... ..................+|.+
T Consensus 373 T~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~G 452 (707)
T KOG0263|consen 373 TFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSG 452 (707)
T ss_pred EEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCC
Confidence 33334567999999999999999999999999999854321 000 0011222334455566889999
Q ss_pred eEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEE
Q 022019 121 SVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVF 199 (304)
Q Consensus 121 ~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~ 199 (304)
+|+.+.| +|+.++|+++++|+++++|.+.+......+.+|.. +|+.+.|+|-|.++|++ .|++-++|
T Consensus 453 PVyg~sF-------sPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~-----PVwdV~F~P~GyYFatas~D~tArLW 520 (707)
T KOG0263|consen 453 PVYGCSF-------SPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLA-----PVWDVQFAPRGYYFATASHDQTARLW 520 (707)
T ss_pred ceeeeee-------cccccceeeccCCcceeeeecccceeEEEecCCCc-----ceeeEEecCCceEEEecCCCceeeee
Confidence 9999988 88999999999999999999999999988887776 99999999999999965 99999999
Q ss_pred EcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcE
Q 022019 200 DVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNY 279 (304)
Q Consensus 200 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 279 (304)
.... ......+.+|.+.|.|+.|+| +..++++||.|.+|++||..+|..+..|.||.++|++++|||+|++
T Consensus 521 s~d~--------~~PlRifaghlsDV~cv~FHP-Ns~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~ 591 (707)
T KOG0263|consen 521 STDH--------NKPLRIFAGHLSDVDCVSFHP-NSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRY 591 (707)
T ss_pred eccc--------CCchhhhcccccccceEEECC-cccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCce
Confidence 9876 233334478999999999999 8889999999999999999999999999999999999999999999
Q ss_pred EEEeeccCCeEEEEecccceeee
Q 022019 280 LYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 280 l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
|++|+ .||.|.+||+.+++.+.
T Consensus 592 LaSg~-ed~~I~iWDl~~~~~v~ 613 (707)
T KOG0263|consen 592 LASGD-EDGLIKIWDLANGSLVK 613 (707)
T ss_pred Eeecc-cCCcEEEEEcCCCcchh
Confidence 99999 99999999999987653
No 11
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=2.5e-34 Score=215.80 Aligned_cols=213 Identities=22% Similarity=0.305 Sum_probs=185.3
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
.+.++||.+.|.+|+|+..|++|++++.|-.+++||..+. ........+|...|.+++|.|
T Consensus 143 e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~----------------~~c~ks~~gh~h~vS~V~f~P--- 203 (406)
T KOG0295|consen 143 ERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTF----------------FRCIKSLIGHEHGVSSVFFLP--- 203 (406)
T ss_pred hhhhhccccceeEEEEecCccEEEecCCccchhheeHHHH----------------HHHHHHhcCcccceeeEEEEe---
Confidence 3478899999999999999999999999988999998742 111124456678889998855
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceee
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
.|.++++++.|.+|+.|++.++.++.++..+.. .|..++.+.||..++++ .|.++++|-+.+
T Consensus 204 ----~gd~ilS~srD~tik~We~~tg~cv~t~~~h~e-----wvr~v~v~~DGti~As~s~dqtl~vW~~~t-------- 266 (406)
T KOG0295|consen 204 ----LGDHILSCSRDNTIKAWECDTGYCVKTFPGHSE-----WVRMVRVNQDGTIIASCSNDQTLRVWVVAT-------- 266 (406)
T ss_pred ----cCCeeeecccccceeEEecccceeEEeccCchH-----hEEEEEecCCeeEEEecCCCceEEEEEecc--------
Confidence 578999999999999999999999999998876 99999999999999965 999999999977
Q ss_pred eeeeccccccccceeEEEeecC--------------CCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCC
Q 022019 212 STLKGNKEGQAGIMSAIAFSPT--------------HTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDG 277 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~--------------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 277 (304)
.........|+.+|.+++|-|. ++.++.+++.|++|++||+.++.++.++.+|..+|..++|+|.|
T Consensus 267 ~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~G 346 (406)
T KOG0295|consen 267 KQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGG 346 (406)
T ss_pred chhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCC
Confidence 2233344678888999999873 23699999999999999999999999999999999999999999
Q ss_pred cEEEEeeccCCeEEEEecccceeee
Q 022019 278 NYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 278 ~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
+||+++. +|+++++||+++++++.
T Consensus 347 kyi~Sca-DDktlrvwdl~~~~cmk 370 (406)
T KOG0295|consen 347 KYILSCA-DDKTLRVWDLKNLQCMK 370 (406)
T ss_pred eEEEEEe-cCCcEEEEEeccceeee
Confidence 9999999 99999999999998864
No 12
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=1.1e-33 Score=218.94 Aligned_cols=208 Identities=24% Similarity=0.394 Sum_probs=176.8
Q ss_pred CCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
+..|++++|+.+|..||+|+.||.+++|+...... ..+..|..+|.++.| +..|.
T Consensus 235 nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~l~------------------~tl~~HkgPI~slKW-------nk~G~ 289 (524)
T KOG0273|consen 235 NKDVTSLDWNNDGTLLATGSEDGEARIWNKDGNLI------------------STLGQHKGPIFSLKW-------NKKGT 289 (524)
T ss_pred cCCcceEEecCCCCeEEEeecCcEEEEEecCchhh------------------hhhhccCCceEEEEE-------cCCCC
Confidence 46899999999999999999999999999864322 244557799999999 77899
Q ss_pred EEEEEeCCCCEEEEEcCCCeeeEEeecccc------------------------------------cccccceEEEEECC
Q 022019 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDA------------------------------------VDEITAAFSVAFNP 183 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------------------------------------~~~~~~v~~i~~~~ 183 (304)
+|++++.|+++.+||..++...+.+..+.. .+|...|.++.|+|
T Consensus 290 yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~ 369 (524)
T KOG0273|consen 290 YILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNP 369 (524)
T ss_pred EEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECC
Confidence 999999999999999988877666555432 13566899999999
Q ss_pred CCcEEEE-EcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCC--------CcEEEEEecCCeEEEEecCC
Q 022019 184 TGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTH--------TGMLAIGSYSQTSAIYREDN 254 (304)
Q Consensus 184 ~~~~l~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~--------~~~l~~~~~dg~i~i~d~~~ 254 (304)
.|.+|++ +.|++++||.... ......+.+|...|..+.|+|.+ +..+++++.|++|++||+..
T Consensus 370 tg~LLaS~SdD~TlkiWs~~~--------~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~ 441 (524)
T KOG0273|consen 370 TGSLLASCSDDGTLKIWSMGQ--------SNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVES 441 (524)
T ss_pred CCceEEEecCCCeeEeeecCC--------CcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccC
Confidence 9999995 5999999999865 22233347788889999998853 45899999999999999999
Q ss_pred ceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 255 MELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 255 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+.++.+|..|..+|++++|+|+|+++++|+ .||.|.+|+.++++.+
T Consensus 442 gv~i~~f~kH~~pVysvafS~~g~ylAsGs-~dg~V~iws~~~~~l~ 487 (524)
T KOG0273|consen 442 GVPIHTLMKHQEPVYSVAFSPNGRYLASGS-LDGCVHIWSTKTGKLV 487 (524)
T ss_pred CceeEeeccCCCceEEEEecCCCcEEEecC-CCCeeEeccccchhee
Confidence 999999999999999999999999999999 9999999999998654
No 13
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=2.5e-32 Score=197.51 Aligned_cols=214 Identities=22% Similarity=0.373 Sum_probs=177.6
Q ss_pred eeeeecCCCCceeEEEEcCC-CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 52 QFRTSSIPNNFLKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 52 ~~~~~~~h~~~V~~i~~s~~-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
.++.+.+|.+.|..++|+|- |..||||+.|+.|++|+...+.. -.....+...|...|.+++|
T Consensus 6 ~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s-------------~~ck~vld~~hkrsVRsvAw--- 69 (312)
T KOG0645|consen 6 LEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDS-------------WTCKTVLDDGHKRSVRSVAW--- 69 (312)
T ss_pred eEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCc-------------EEEEEeccccchheeeeeee---
Confidence 34578899999999999997 88999999999999999874211 00111133457789999998
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCC--eeeEEeecccccccccceEEEEECCCCcEEEE-EcCCeEEEEEcCCCCcc
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTG--LLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRD 207 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~~i~v~d~~~~~~~ 207 (304)
+|.|++|++++.|.++.||.-..+ +++.++++|.. .|.+++|+++|++||+ +.|..|-||.+.. ...
T Consensus 70 ----sp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEn-----EVK~Vaws~sG~~LATCSRDKSVWiWe~de-ddE 139 (312)
T KOG0645|consen 70 ----SPHGRYLASASFDATVVIWKKEDGEFECVATLEGHEN-----EVKCVAWSASGNYLATCSRDKSVWIWEIDE-DDE 139 (312)
T ss_pred ----cCCCcEEEEeeccceEEEeecCCCceeEEeeeecccc-----ceeEEEEcCCCCEEEEeeCCCeEEEEEecC-CCc
Confidence 779999999999999999986654 45566676665 9999999999999995 5999999999984 444
Q ss_pred ceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC---CceEeEEeccccCCeEEEEECCCCcEEEEee
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED---NMELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
+.....+ ..|...|..+.|+| ...+|+++++|++|++|+-. ...++.++.+|...|.+++|+|.|..|++++
T Consensus 140 fec~aVL----~~HtqDVK~V~WHP-t~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~s 214 (312)
T KOG0645|consen 140 FECIAVL----QEHTQDVKHVIWHP-TEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCS 214 (312)
T ss_pred EEEEeee----ccccccccEEEEcC-CcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEec
Confidence 5444444 67888899999999 77899999999999999765 4578999999999999999999999999999
Q ss_pred ccCCeEEEEeccc
Q 022019 285 RKDPYILCWDLRK 297 (304)
Q Consensus 285 ~~d~~i~vwd~~~ 297 (304)
.|++++||...+
T Consensus 215 -dD~tv~Iw~~~~ 226 (312)
T KOG0645|consen 215 -DDGTVSIWRLYT 226 (312)
T ss_pred -CCcceEeeeecc
Confidence 999999998543
No 14
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=7.2e-34 Score=213.14 Aligned_cols=220 Identities=17% Similarity=0.271 Sum_probs=186.3
Q ss_pred CCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCe
Q 022019 42 PPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGES 121 (304)
Q Consensus 42 ~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (304)
+.+....+++.++.+.+|.+.|.|+++.|...+|+||+.|++++|||+.++.+... ..+|...
T Consensus 133 ~rPeWHapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~Lklt-----------------ltGhi~~ 195 (460)
T KOG0285|consen 133 PRPEWHAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLT-----------------LTGHIET 195 (460)
T ss_pred CCccccCcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEe-----------------ecchhhe
Confidence 34444567788889999999999999999999999999999999999998765432 3335567
Q ss_pred EEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEE
Q 022019 122 VYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFD 200 (304)
Q Consensus 122 v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d 200 (304)
|..+++ |+-..++++++.|+.|+.||++..+.++.+.+|-. .|++++.+|.-..|++| .|.+++|||
T Consensus 196 vr~vav-------S~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS-----~V~~L~lhPTldvl~t~grDst~RvWD 263 (460)
T KOG0285|consen 196 VRGVAV-------SKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLS-----GVYCLDLHPTLDVLVTGGRDSTIRVWD 263 (460)
T ss_pred eeeeee-------cccCceEEEecCCCeeEEEechhhhhHHHhccccc-----eeEEEeccccceeEEecCCcceEEEee
Confidence 777776 55566999999999999999999988877766554 99999999999999965 999999999
Q ss_pred cCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEE
Q 022019 201 VHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYL 280 (304)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 280 (304)
+|+. .....+.+|..+|..+.+.|. ...+++|+.|++|++||++.++...++..|+..|.+++.+|....+
T Consensus 264 iRtr--------~~V~~l~GH~~~V~~V~~~~~-dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~f 334 (460)
T KOG0285|consen 264 IRTR--------ASVHVLSGHTNPVASVMCQPT-DPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLF 334 (460)
T ss_pred eccc--------ceEEEecCCCCcceeEEeecC-CCceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhh
Confidence 9983 233334889999999999994 4478999999999999999999999999999999999999999999
Q ss_pred EEeeccCCeEEEEecccceee
Q 022019 281 YTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 281 ~~~~~~d~~i~vwd~~~~~~~ 301 (304)
++++ .| .|+-|++..|..+
T Consensus 335 ASas-~d-nik~w~~p~g~f~ 353 (460)
T KOG0285|consen 335 ASAS-PD-NIKQWKLPEGEFL 353 (460)
T ss_pred hccC-Cc-cceeccCCccchh
Confidence 9988 55 5999999877543
No 15
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=1.8e-32 Score=200.31 Aligned_cols=206 Identities=23% Similarity=0.333 Sum_probs=178.0
Q ss_pred eeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 52 QFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 52 ~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
..+.+.+|.+.+.|+.|-+|+ .|+|++.|.+..+||+++++.. ....+|...|.++...|.
T Consensus 137 v~r~l~gHtgylScC~f~dD~-~ilT~SGD~TCalWDie~g~~~-----------------~~f~GH~gDV~slsl~p~- 197 (343)
T KOG0286|consen 137 VSRELAGHTGYLSCCRFLDDN-HILTGSGDMTCALWDIETGQQT-----------------QVFHGHTGDVMSLSLSPS- 197 (343)
T ss_pred eeeeecCccceeEEEEEcCCC-ceEecCCCceEEEEEcccceEE-----------------EEecCCcccEEEEecCCC-
Confidence 345789999999999998755 7889999999999999876542 244567788999877442
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCcccee
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~ 210 (304)
+++.|++|+-|+..++||++.+...+++..|.. .|+++.|.|+|.-+++| .|++.++||+|... +...
T Consensus 198 -----~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghes-----DINsv~ffP~G~afatGSDD~tcRlyDlRaD~-~~a~ 266 (343)
T KOG0286|consen 198 -----DGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHES-----DINSVRFFPSGDAFATGSDDATCRLYDLRADQ-ELAV 266 (343)
T ss_pred -----CCCeEEecccccceeeeeccCcceeEeeccccc-----ccceEEEccCCCeeeecCCCceeEEEeecCCc-EEee
Confidence 889999999999999999999999999998776 99999999999999977 99999999999742 2221
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeE
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYI 290 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i 290 (304)
+. ......+|++++|+. .+++|++|..|..+.+||.-.++.+..+.+|++.|+++..+|||.-|++|+ .|.++
T Consensus 267 ys-----~~~~~~gitSv~FS~-SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgS-WDs~l 339 (343)
T KOG0286|consen 267 YS-----HDSIICGITSVAFSK-SGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGS-WDSTL 339 (343)
T ss_pred ec-----cCcccCCceeEEEcc-cccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecc-hhHhe
Confidence 11 234456799999999 888999999999999999999999999999999999999999999999999 99999
Q ss_pred EEEe
Q 022019 291 LCWD 294 (304)
Q Consensus 291 ~vwd 294 (304)
+||.
T Consensus 340 riW~ 343 (343)
T KOG0286|consen 340 RIWA 343 (343)
T ss_pred eecC
Confidence 9994
No 16
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=100.00 E-value=4.7e-33 Score=205.28 Aligned_cols=232 Identities=16% Similarity=0.343 Sum_probs=183.1
Q ss_pred eeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccc-cccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 54 RTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNAC-SLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 54 ~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
..+..|++++.+.+|+|||.++|||+.|-.|+|.|+...-........ .........+...+..|..+|.++.|+|
T Consensus 106 ~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHP--- 182 (430)
T KOG0640|consen 106 KYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHP--- 182 (430)
T ss_pred EEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecc---
Confidence 467889999999999999999999999999999998632111110000 0111223356667788899999998854
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceee
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
....|++|+.|++|++||+........++... ...+|.++.|+|.|.++++| ....+++||+.+- +++
T Consensus 183 ----re~ILiS~srD~tvKlFDfsK~saKrA~K~~q---d~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~----Qcf 251 (430)
T KOG0640|consen 183 ----RETILISGSRDNTVKLFDFSKTSAKRAFKVFQ---DTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTY----QCF 251 (430)
T ss_pred ----hhheEEeccCCCeEEEEecccHHHHHHHHHhh---ccceeeeEeecCCCceEEEecCCCceeEEeccce----eEe
Confidence 67799999999999999998654443333322 22389999999999999988 6678999999873 111
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec-cccC-CeEEEEECCCCcEEEEeeccCCe
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH-GQEG-GVTHVQFSRDGNYLYTGGRKDPY 289 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~-~v~~~~~~~~~~~l~~~~~~d~~ 289 (304)
........|.+.|+++.+++ .+.++++|+.||.|+|||--+++++.++. .|.+ .|.+..|..+|+||++.| .|..
T Consensus 252 -vsanPd~qht~ai~~V~Ys~-t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG-~DS~ 328 (430)
T KOG0640|consen 252 -VSANPDDQHTGAITQVRYSS-TGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSG-KDST 328 (430)
T ss_pred -eecCcccccccceeEEEecC-CccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecC-Ccce
Confidence 11224477899999999999 88899999999999999999999998886 5654 699999999999999999 9999
Q ss_pred EEEEecccceeee
Q 022019 290 ILCWDLRKAVQVV 302 (304)
Q Consensus 290 i~vwd~~~~~~~~ 302 (304)
+++|++.+++.+.
T Consensus 329 vkLWEi~t~R~l~ 341 (430)
T KOG0640|consen 329 VKLWEISTGRMLK 341 (430)
T ss_pred eeeeeecCCceEE
Confidence 9999999998875
No 17
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=2.8e-32 Score=211.20 Aligned_cols=219 Identities=20% Similarity=0.337 Sum_probs=178.2
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcccccccccc------------------------ccCCcc
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLA------------------------KDQDSY 110 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~------------------------~~~~~~ 110 (304)
++..|+++|.+++|+.+|.||++++.||++.+||..++.....+..+... .-....
T Consensus 271 tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~ 350 (524)
T KOG0273|consen 271 TLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDR 350 (524)
T ss_pred hhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCC
Confidence 67789999999999999999999999999999999776543222221111 011222
Q ss_pred ceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCC-----
Q 022019 111 EASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG----- 185 (304)
Q Consensus 111 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~----- 185 (304)
......+|..+|.++.| +|.+.+|++++.|++++||+.........+..|.. .|+.+.|+|+|
T Consensus 351 P~~t~~GH~g~V~alk~-------n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hsk-----ei~t~~wsp~g~v~~n 418 (524)
T KOG0273|consen 351 PVKTFIGHHGEVNALKW-------NPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSK-----EIYTIKWSPTGPVTSN 418 (524)
T ss_pred cceeeecccCceEEEEE-------CCCCceEEEecCCCeeEeeecCCCcchhhhhhhcc-----ceeeEeecCCCCccCC
Confidence 23344557888999988 66899999999999999999888777777776665 89999999976
Q ss_pred ----cEEE-EEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEE
Q 022019 186 ----TKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYV 260 (304)
Q Consensus 186 ----~~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 260 (304)
..++ ++.|++|++||+..+ .....+..|..+|++++|+| ++.++|+|+.||.|++|+++.++..+.
T Consensus 419 ~~~~~~l~sas~dstV~lwdv~~g--------v~i~~f~kH~~pVysvafS~-~g~ylAsGs~dg~V~iws~~~~~l~~s 489 (524)
T KOG0273|consen 419 PNMNLMLASASFDSTVKLWDVESG--------VPIHTLMKHQEPVYSVAFSP-NGRYLASGSLDGCVHIWSTKTGKLVKS 489 (524)
T ss_pred CcCCceEEEeecCCeEEEEEccCC--------ceeEeeccCCCceEEEEecC-CCcEEEecCCCCeeEeccccchheeEe
Confidence 3455 569999999999873 22233467999999999999 888999999999999999999999999
Q ss_pred eccccCCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 261 LHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 261 ~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
+.+ .+.|..++|+.+|.+|..+. .|+.+++.|++
T Consensus 490 ~~~-~~~Ifel~Wn~~G~kl~~~~-sd~~vcvldlr 523 (524)
T KOG0273|consen 490 YQG-TGGIFELCWNAAGDKLGACA-SDGSVCVLDLR 523 (524)
T ss_pred ecC-CCeEEEEEEcCCCCEEEEEe-cCCCceEEEec
Confidence 985 56799999999999999888 99999999986
No 18
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=1.3e-33 Score=214.94 Aligned_cols=203 Identities=20% Similarity=0.421 Sum_probs=170.0
Q ss_pred CCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
+-+|..+.|.|+|+.|++|+..|.+.+|+...-.. ..+...|..+|.++.| ++++.
T Consensus 96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnF-----------------EtilQaHDs~Vr~m~w-------s~~g~ 151 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNF-----------------ETILQAHDSPVRTMKW-------SHNGT 151 (464)
T ss_pred ccceeeEEEcCCCceeEeecccccEEEecCceeeH-----------------HHHhhhhcccceeEEE-------ccCCC
Confidence 45799999999999999999999999998742111 1144567799999999 77999
Q ss_pred EEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCCccceeeeeeeccc
Q 022019 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNK 218 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 218 (304)
++++|+.+|.|++|+....... .+..+. ...|.+++|+|....++ ++.||+|+|||...... ...+
T Consensus 152 wmiSgD~gG~iKyWqpnmnnVk-~~~ahh----~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~ke--------e~vL 218 (464)
T KOG0284|consen 152 WMISGDKGGMIKYWQPNMNNVK-IIQAHH----AEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKE--------ERVL 218 (464)
T ss_pred EEEEcCCCceEEecccchhhhH-HhhHhh----hhhhheeccCCCCceeEEecCCCeEEEEeccCCch--------hhee
Confidence 9999999999999998654433 333222 12899999999877777 56999999999987422 1222
Q ss_pred cccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 219 ~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
.+|.-.|.+++|+| ...++++|+.|..|++||.+++.++.++.+|+..|..+.|+|++++|+++| .|..++++|+++.
T Consensus 219 ~GHgwdVksvdWHP-~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~s-kD~~~kv~DiR~m 296 (464)
T KOG0284|consen 219 RGHGWDVKSVDWHP-TKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGS-KDQSCKVFDIRTM 296 (464)
T ss_pred ccCCCCcceeccCC-ccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEcc-CCceEEEEehhHh
Confidence 78888999999999 677999999999999999999999999999999999999999999999999 9999999999965
Q ss_pred eee
Q 022019 299 VQV 301 (304)
Q Consensus 299 ~~~ 301 (304)
+.+
T Consensus 297 kEl 299 (464)
T KOG0284|consen 297 KEL 299 (464)
T ss_pred HHH
Confidence 544
No 19
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=1.4e-31 Score=222.83 Aligned_cols=215 Identities=23% Similarity=0.411 Sum_probs=178.9
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
.+.+.+|...|.+++|+|+++++++++.|++++|||+... .........|...|++++|
T Consensus 196 ~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~----------------~~~~~~l~gH~~~v~~~~f----- 254 (456)
T KOG0266|consen 196 LRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDD----------------GRNLKTLKGHSTYVTSVAF----- 254 (456)
T ss_pred hccccccccceeeeEECCCCcEEEEecCCceEEEeeccCC----------------CeEEEEecCCCCceEEEEe-----
Confidence 4466899999999999999999999999999999999422 1222355578899999988
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceee
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
+|+++++++|+.|++|++||++++++...+..|.. .|.+++|++++.+|+++ .|+.|++||+.+.... ..
T Consensus 255 --~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~-----~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~--~~ 325 (456)
T KOG0266|consen 255 --SPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSD-----GISGLAFSPDGNLLVSASYDGTIRVWDLETGSKL--CL 325 (456)
T ss_pred --cCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCC-----ceEEEEECCCCCEEEEcCCCccEEEEECCCCcee--ee
Confidence 77889999999999999999999999999998886 99999999999999976 8999999999875321 11
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCC---eEEEEECCCCcEEEEeeccCC
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGG---VTHVQFSRDGNYLYTGGRKDP 288 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---v~~~~~~~~~~~l~~~~~~d~ 288 (304)
..+.. ..... +++++.|+| ++.++++++.|+.+++||++.+..+..+.+|... +.+...++.+.++++|+ .|+
T Consensus 326 ~~~~~-~~~~~-~~~~~~fsp-~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~-~d~ 401 (456)
T KOG0266|consen 326 KLLSG-AENSA-PVTSVQFSP-NGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGS-EDG 401 (456)
T ss_pred ecccC-CCCCC-ceeEEEECC-CCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEe-CCc
Confidence 11111 12222 699999999 8889999999999999999999999999988874 44555688999999999 999
Q ss_pred eEEEEecccceee
Q 022019 289 YILCWDLRKAVQV 301 (304)
Q Consensus 289 ~i~vwd~~~~~~~ 301 (304)
.|.+||+.++..+
T Consensus 402 ~v~~~~~~s~~~~ 414 (456)
T KOG0266|consen 402 SVYVWDSSSGGIL 414 (456)
T ss_pred eEEEEeCCccchh
Confidence 9999999986543
No 20
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=1.9e-31 Score=221.90 Aligned_cols=213 Identities=28% Similarity=0.424 Sum_probs=178.7
Q ss_pred eeeecCC-CCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 53 FRTSSIP-NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 53 ~~~~~~h-~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
...+.+| ...|.++.|+++|++|++++.|+.+++|+...... ........|...|.+++|
T Consensus 151 ~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~---------------~~~~~l~~h~~~v~~~~f---- 211 (456)
T KOG0266|consen 151 EQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS---------------NLLRELSGHTRGVSDVAF---- 211 (456)
T ss_pred eeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccc---------------hhhccccccccceeeeEE----
Confidence 3345444 88999999999999999999999999999854431 001122456688999988
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEc-CCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccce
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDA-TTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~-~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~ 209 (304)
+|+++++++++.|++|++||+ ..+....++..|.. .|++++|+|+++++++| .|++|+|||+++
T Consensus 212 ---s~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~-----~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~------ 277 (456)
T KOG0266|consen 212 ---SPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHST-----YVTSVAFSPDGNLLVSGSDDGTVRIWDVRT------ 277 (456)
T ss_pred ---CCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCC-----ceEEEEecCCCCEEEEecCCCcEEEEeccC------
Confidence 789999999999999999999 45578888887776 99999999999888866 999999999987
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce--EeEEeccccCC--eEEEEECCCCcEEEEeec
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYVLHGQEGG--VTHVQFSRDGNYLYTGGR 285 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~ 285 (304)
........+|...|++++|++ ++.+|++++.|+.|+|||+.++. +...+.++... ++++.|+|++.+|++++
T Consensus 278 --~~~~~~l~~hs~~is~~~f~~-d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~- 353 (456)
T KOG0266|consen 278 --GECVRKLKGHSDGISGLAFSP-DGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSAS- 353 (456)
T ss_pred --CeEEEeeeccCCceEEEEECC-CCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEec-
Confidence 233334478999999999999 78899999999999999999998 66777776665 99999999999999999
Q ss_pred cCCeEEEEecccceeee
Q 022019 286 KDPYILCWDLRKAVQVV 302 (304)
Q Consensus 286 ~d~~i~vwd~~~~~~~~ 302 (304)
.|+.+++||++.++.+.
T Consensus 354 ~d~~~~~w~l~~~~~~~ 370 (456)
T KOG0266|consen 354 LDRTLKLWDLRSGKSVG 370 (456)
T ss_pred CCCeEEEEEccCCccee
Confidence 99999999999886653
No 21
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=6.5e-32 Score=198.07 Aligned_cols=204 Identities=18% Similarity=0.309 Sum_probs=173.8
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+.+|.+.|..+.|+|+|.+||||+.|..|.+|++...... ......|...|..+.|
T Consensus 42 ~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN----------------~~~lkgHsgAVM~l~~------- 98 (338)
T KOG0265|consen 42 LLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCEN----------------FWVLKGHSGAVMELHG------- 98 (338)
T ss_pred hcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccc----------------eeeeccccceeEeeee-------
Confidence 67899999999999999999999999999999997643221 1134478899999988
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~~ 212 (304)
.++++.+++++.|.+++.||+++|+....++.|.. .|+++.-+.-|..++ ++ .|+++++||+|.... . .
T Consensus 99 ~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~-----~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~-~---~ 169 (338)
T KOG0265|consen 99 MRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTS-----FVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEA-I---K 169 (338)
T ss_pred ccCCCEEEEecCCceEEEEecccceeeehhccccc-----eeeecCccccCCeEEEecCCCceEEEEeecccch-h---h
Confidence 77999999999999999999999999998888775 788888555677777 55 899999999996321 1 1
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
. ......++++.|.. .+..+.+|+-|+.|++||++.+.....++||..+|+.+..+|+|.++.+-+ .|.++++
T Consensus 170 t-----~~~kyqltAv~f~d-~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsns-Md~tvrv 242 (338)
T KOG0265|consen 170 T-----FENKYQLTAVGFKD-TSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNS-MDNTVRV 242 (338)
T ss_pred c-----cccceeEEEEEecc-cccceeeccccCceeeeccccCcceEEeecccCceeeEEeccCCCcccccc-ccceEEE
Confidence 1 11234589999998 677889999999999999999999999999999999999999999999999 9999999
Q ss_pred Eeccc
Q 022019 293 WDLRK 297 (304)
Q Consensus 293 wd~~~ 297 (304)
||++.
T Consensus 243 wd~rp 247 (338)
T KOG0265|consen 243 WDVRP 247 (338)
T ss_pred EEecc
Confidence 99975
No 22
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=3.9e-31 Score=189.31 Aligned_cols=228 Identities=17% Similarity=0.279 Sum_probs=180.5
Q ss_pred cHHhhccccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccc
Q 022019 22 TEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNAC 101 (304)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 101 (304)
..+++-|...+.| +..++... +++....+.|+.+...|+++.||+++.- .||+||+.++..
T Consensus 13 LvsA~YDhTIRfW-----qa~tG~C~------rTiqh~dsqVNrLeiTpdk~~LAaa~~q-hvRlyD~~S~np------- 73 (311)
T KOG0315|consen 13 LVSAGYDHTIRFW-----QALTGICS------RTIQHPDSQVNRLEITPDKKDLAAAGNQ-HVRLYDLNSNNP------- 73 (311)
T ss_pred EEeccCcceeeee-----ehhcCeEE------EEEecCccceeeEEEcCCcchhhhccCC-eeEEEEccCCCC-------
Confidence 3445555555555 44455444 3666677889999999999999998875 699999986532
Q ss_pred cccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEE
Q 022019 102 SLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAF 181 (304)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~ 181 (304)
........|...|..+.| ..+|+++++|++||+++|||++...+.+.+... .+|+++..
T Consensus 74 --------~Pv~t~e~h~kNVtaVgF-------~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~------spVn~vvl 132 (311)
T KOG0315|consen 74 --------NPVATFEGHTKNVTAVGF-------QCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHN------SPVNTVVL 132 (311)
T ss_pred --------CceeEEeccCCceEEEEE-------eecCeEEEecCCCceEEEEeccCcccchhccCC------CCcceEEe
Confidence 123345567788888877 779999999999999999999986666555544 39999999
Q ss_pred CCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc-----
Q 022019 182 NPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM----- 255 (304)
Q Consensus 182 ~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~----- 255 (304)
+|+...|++| .+|.|++||+....-. ..+ .......|.++...| ++.+++.+...|..++|++-+.
T Consensus 133 hpnQteLis~dqsg~irvWDl~~~~c~----~~l---iPe~~~~i~sl~v~~-dgsml~a~nnkG~cyvW~l~~~~~~s~ 204 (311)
T KOG0315|consen 133 HPNQTELISGDQSGNIRVWDLGENSCT----HEL---IPEDDTSIQSLTVMP-DGSMLAAANNKGNCYVWRLLNHQTASE 204 (311)
T ss_pred cCCcceEEeecCCCcEEEEEccCCccc----ccc---CCCCCcceeeEEEcC-CCcEEEEecCCccEEEEEccCCCcccc
Confidence 9998888877 9999999999864111 111 133346699999999 7889999999999999998643
Q ss_pred -eEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 256 -ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 256 -~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
+++..++.|.+.+..+.+|||+++|++++ .|.+++||+.++.
T Consensus 205 l~P~~k~~ah~~~il~C~lSPd~k~lat~s-sdktv~iwn~~~~ 247 (311)
T KOG0315|consen 205 LEPVHKFQAHNGHILRCLLSPDVKYLATCS-SDKTVKIWNTDDF 247 (311)
T ss_pred ceEhhheecccceEEEEEECCCCcEEEeec-CCceEEEEecCCc
Confidence 57788899999999999999999999999 9999999999876
No 23
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=2.5e-31 Score=216.90 Aligned_cols=222 Identities=23% Similarity=0.317 Sum_probs=183.7
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
.+..|+.....-.. ...+|...+++++++|||+++|||+.||.|+|||...+- ....
T Consensus 331 QLlVweWqsEsYVl------KQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~Sgf-----------------C~vT 387 (893)
T KOG0291|consen 331 QLLVWEWQSESYVL------KQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGF-----------------CFVT 387 (893)
T ss_pred eEEEEEeeccceee------eccccccceeeEEECCCCcEEEeccCCCcEEEEeccCce-----------------EEEE
Confidence 34455554443322 557999999999999999999999999999999987543 2335
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d 193 (304)
...|...|+.++| +..|+.+++.+-||+|+.||+...+.-+++..+... ...+++.+|.|..+++| .|
T Consensus 388 FteHts~Vt~v~f-------~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~----QfscvavD~sGelV~AG~~d 456 (893)
T KOG0291|consen 388 FTEHTSGVTAVQF-------TARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPI----QFSCVAVDPSGELVCAGAQD 456 (893)
T ss_pred eccCCCceEEEEE-------EecCCEEEEeecCCeEEeeeecccceeeeecCCCce----eeeEEEEcCCCCEEEeeccc
Confidence 5667789999988 668999999999999999999999888888776532 66799999999999977 44
Q ss_pred -CeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc-eEeEEeccccCCeEEE
Q 022019 194 -KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM-ELLYVLHGQEGGVTHV 271 (304)
Q Consensus 194 -~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~~ 271 (304)
=.|.+|++.+ ..+.....+|.+||.+++|+| .+..|++||.|.+|++||+-.. ..+.++. +...+..+
T Consensus 457 ~F~IfvWS~qT--------GqllDiLsGHEgPVs~l~f~~-~~~~LaS~SWDkTVRiW~if~s~~~vEtl~-i~sdvl~v 526 (893)
T KOG0291|consen 457 SFEIFVWSVQT--------GQLLDILSGHEGPVSGLSFSP-DGSLLASGSWDKTVRIWDIFSSSGTVETLE-IRSDVLAV 526 (893)
T ss_pred eEEEEEEEeec--------CeeeehhcCCCCcceeeEEcc-ccCeEEeccccceEEEEEeeccCceeeeEe-eccceeEE
Confidence 4699999988 445555689999999999999 7779999999999999998654 3455555 67789999
Q ss_pred EECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 272 QFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 272 ~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+|+|+|+.|+++. -||.|.+||...+.++
T Consensus 527 sfrPdG~elaVaT-ldgqItf~d~~~~~q~ 555 (893)
T KOG0291|consen 527 SFRPDGKELAVAT-LDGQITFFDIKEAVQV 555 (893)
T ss_pred EEcCCCCeEEEEE-ecceEEEEEhhhceee
Confidence 9999999999999 9999999999887665
No 24
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=100.00 E-value=1.6e-31 Score=198.12 Aligned_cols=276 Identities=46% Similarity=0.808 Sum_probs=219.5
Q ss_pred cHHhhccccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccc
Q 022019 22 TEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNAC 101 (304)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 101 (304)
.+...++.....|+ +.+...+.........+...+ ..+...+..|+|||..|++-+.|..+++|++............
T Consensus 13 gek~~ede~~~s~n-~~y~qg~~~l~g~~~~~stt~-p~nf~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~ 90 (406)
T KOG2919|consen 13 GEKDDEDEKKKSWN-FGYVQGPINLGGNVIAFSTTK-PLNFLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGP 90 (406)
T ss_pred CccCcccchhccCc-cceeecceeccCceEEeccCC-chhhhccceeCCCCceEEeecccCeeeEEecChhhcccCCCCc
Confidence 33445566667776 555544443333222222222 4556778999999999999999999999998754332221111
Q ss_pred cccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEE
Q 022019 102 SLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAF 181 (304)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~ 181 (304)
........+....+..|++.+|.+..-...|+.+++++.+.+..|++||.-+|+....+.............++.|
T Consensus 91 ----~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~F 166 (406)
T KOG2919|consen 91 ----LNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQF 166 (406)
T ss_pred ----cccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEe
Confidence 1122334466677889999999999888899999999999999999999999999999888777666667789999
Q ss_pred CCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEe
Q 022019 182 NPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVL 261 (304)
Q Consensus 182 ~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 261 (304)
+|||..|++|..++|++||+..+++......++.....+..+.+.+++|+|.+...+++|+....+-||.-....++..+
T Consensus 167 s~DGeqlfaGykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~ll 246 (406)
T KOG2919|consen 167 SPDGEQLFAGYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLL 246 (406)
T ss_pred cCCCCeEeecccceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeee
Confidence 99999999999999999999776665555555544456677889999999988889999999999999999899999999
Q ss_pred ccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceeeee
Q 022019 262 HGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVY 303 (304)
Q Consensus 262 ~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~~~ 303 (304)
-+|.+.|+.+.|.++|+.|++|++.|..|..||++..+.+++
T Consensus 247 ggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~ 288 (406)
T KOG2919|consen 247 GGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVY 288 (406)
T ss_pred cccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhh
Confidence 999999999999999999999999999999999998877665
No 25
>PTZ00421 coronin; Provisional
Probab=100.00 E-value=1.4e-30 Score=216.13 Aligned_cols=218 Identities=18% Similarity=0.286 Sum_probs=162.7
Q ss_pred eecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 55 TSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
.+.+|.+.|++++|+| ++.+|++|+.||+|++||+.++...... .........|...|.+++|+|.
T Consensus 70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~----------~~~l~~L~gH~~~V~~l~f~P~--- 136 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNI----------SDPIVHLQGHTKKVGIVSFHPS--- 136 (493)
T ss_pred eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCcccccc----------CcceEEecCCCCcEEEEEeCcC---
Confidence 5789999999999999 8899999999999999999764321110 0112234567788999998542
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeee
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~ 212 (304)
.+++|++++.|++|+|||+.+++....+..+.. .|.+++|+|++.+|+++ .|+.|++||++++. . ..
T Consensus 137 ---~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~-----~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~-~---v~ 204 (493)
T PTZ00421 137 ---AMNVLASAGADMVVNVWDVERGKAVEVIKCHSD-----QITSLEWNLDGSLLCTTSKDKKLNIIDPRDGT-I---VS 204 (493)
T ss_pred ---CCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCC-----ceEEEEEECCCCEEEEecCCCEEEEEECCCCc-E---EE
Confidence 246899999999999999999988777765554 89999999999999965 99999999998742 1 11
Q ss_pred eeeccccccccc-eeEEEeecCCCcEEEEE---ecCCeEEEEecCCce-EeEEeccc-cCCeEEEEECCCCcEEEEeecc
Q 022019 213 TLKGNKEGQAGI-MSAIAFSPTHTGMLAIG---SYSQTSAIYREDNME-LLYVLHGQ-EGGVTHVQFSRDGNYLYTGGRK 286 (304)
Q Consensus 213 ~~~~~~~~~~~~-v~~~~~~p~~~~~l~~~---~~dg~i~i~d~~~~~-~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~ 286 (304)
.+ .+|.+. ...+.|.|+++.++.+| +.|+.|++||+++.. ++.....+ ...+....|++++.+|++++..
T Consensus 205 tl----~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkg 280 (493)
T PTZ00421 205 SV----EAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKG 280 (493)
T ss_pred EE----ecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeC
Confidence 22 344433 45678888444444444 247899999998754 44444333 3456677899999999988734
Q ss_pred CCeEEEEecccceee
Q 022019 287 DPYILCWDLRKAVQV 301 (304)
Q Consensus 287 d~~i~vwd~~~~~~~ 301 (304)
|+.|++||+.+++.+
T Consensus 281 Dg~Iriwdl~~~~~~ 295 (493)
T PTZ00421 281 EGNIRCFELMNERLT 295 (493)
T ss_pred CCeEEEEEeeCCceE
Confidence 999999999988654
No 26
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=4.8e-33 Score=211.83 Aligned_cols=206 Identities=19% Similarity=0.358 Sum_probs=174.6
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+..|..+|+++.|+++|.++++|+.+|.|++|+..-+. +..+...|...|++++|
T Consensus 133 ilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnn-----------------Vk~~~ahh~eaIRdlaf------- 188 (464)
T KOG0284|consen 133 ILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNN-----------------VKIIQAHHAEAIRDLAF------- 188 (464)
T ss_pred HhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhh-----------------hHHhhHhhhhhhheecc-------
Confidence 457899999999999999999999999999999976321 11233345578888877
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
+|+...|+++++||+|+|||....+....+..|.- .|.+++|+|...+|+++ .|..|++||.+++ .
T Consensus 189 SpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgw-----dVksvdWHP~kgLiasgskDnlVKlWDprSg--------~ 255 (464)
T KOG0284|consen 189 SPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGW-----DVKSVDWHPTKGLIASGSKDNLVKLWDPRSG--------S 255 (464)
T ss_pred CCCCceeEEecCCCeEEEEeccCCchhheeccCCC-----CcceeccCCccceeEEccCCceeEeecCCCc--------c
Confidence 67778899999999999999998888888877765 89999999999999965 9999999999984 2
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCc-EEEEeeccCCeEEE
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN-YLYTGGRKDPYILC 292 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~d~~i~v 292 (304)
......+|...|..+.|+| ++.+|+++|.|..+++||+++.+.++.+++|+..|+++.|+|-.. +|.+|| .||.|..
T Consensus 256 cl~tlh~HKntVl~~~f~~-n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg-~Dgsvvh 333 (464)
T KOG0284|consen 256 CLATLHGHKNTVLAVKFNP-NGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGG-SDGSVVH 333 (464)
T ss_pred hhhhhhhccceEEEEEEcC-CCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeecc-CCCceEE
Confidence 2233367888999999999 668999999999999999999999999999999999999999654 556666 9999999
Q ss_pred Eecccce
Q 022019 293 WDLRKAV 299 (304)
Q Consensus 293 wd~~~~~ 299 (304)
|.+...+
T Consensus 334 ~~v~~~~ 340 (464)
T KOG0284|consen 334 WVVGLEE 340 (464)
T ss_pred Eeccccc
Confidence 9987433
No 27
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=2.3e-32 Score=212.26 Aligned_cols=217 Identities=20% Similarity=0.333 Sum_probs=178.6
Q ss_pred ccccccceeeeecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEE
Q 022019 45 RTYHFYNQFRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVY 123 (304)
Q Consensus 45 ~~~~~~~~~~~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 123 (304)
+.+.+.+....+.||+..|+++.|.| .+.+|++++.|+.|+||++.. +........+|..+|.
T Consensus 199 rc~~Pkk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~----------------~~~~lrtf~gH~k~Vr 262 (503)
T KOG0282|consen 199 RCYLPKKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYD----------------DRRCLRTFKGHRKPVR 262 (503)
T ss_pred eeeccHhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEec----------------Ccceehhhhcchhhhh
Confidence 44555677789999999999999999 899999999999999999874 2223335677889999
Q ss_pred EEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCC-cEEEEE-cCCeEEEEEc
Q 022019 124 DFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG-TKIFAG-YNKSVRVFDV 201 (304)
Q Consensus 124 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~-~d~~i~v~d~ 201 (304)
+++| +.+|..|++++.|+.|++||+++|++...+.... .++++.|+|++ +.+++| .|+.|+.||+
T Consensus 263 d~~~-------s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~~~------~~~cvkf~pd~~n~fl~G~sd~ki~~wDi 329 (503)
T KOG0282|consen 263 DASF-------NNCGTSFLSASFDRFLKLWDTETGQVLSRFHLDK------VPTCVKFHPDNQNIFLVGGSDKKIRQWDI 329 (503)
T ss_pred hhhc-------cccCCeeeeeecceeeeeeccccceEEEEEecCC------CceeeecCCCCCcEEEEecCCCcEEEEec
Confidence 9988 7799999999999999999999999998887655 78899999998 555566 9999999999
Q ss_pred CCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeE----------------------
Q 022019 202 HRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLY---------------------- 259 (304)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~---------------------- 259 (304)
|.+ .+......|-+.|..+.|-| ++..+++.++|+.++||+.+...++.
T Consensus 330 Rs~--------kvvqeYd~hLg~i~~i~F~~-~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~ 400 (503)
T KOG0282|consen 330 RSG--------KVVQEYDRHLGAILDITFVD-EGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWF 400 (503)
T ss_pred cch--------HHHHHHHhhhhheeeeEEcc-CCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCee
Confidence 983 34444467888899999999 88899999999999999876442111
Q ss_pred ------------------------Eecccc--CCeEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 260 ------------------------VLHGQE--GGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 260 ------------------------~~~~~~--~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
.+.+|. +.-..+.|||||.+|++|. .||.+.+||.++.+.
T Consensus 401 ~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGd-sdG~v~~wdwkt~kl 466 (503)
T KOG0282|consen 401 AAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGD-SDGKVNFWDWKTTKL 466 (503)
T ss_pred hhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeec-CCccEEEeechhhhh
Confidence 123443 3456789999999999999 999999999988654
No 28
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=6.2e-31 Score=186.87 Aligned_cols=209 Identities=23% Similarity=0.360 Sum_probs=176.6
Q ss_pred eeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 52 QFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 52 ~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
.++.+..|.++|..+.|+-||+|.++|+.|++|++|+...+.+. ....+|+..|.+.+.
T Consensus 9 r~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~li-----------------ktYsghG~EVlD~~~---- 67 (307)
T KOG0316|consen 9 RLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALI-----------------KTYSGHGHEVLDAAL---- 67 (307)
T ss_pred hceeecccccceEEEEEccCCCEEEEcCCCceEEeeccccccee-----------------eeecCCCceeeeccc----
Confidence 45578899999999999999999999999999999998755432 245567788888755
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCcccee
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~ 210 (304)
+.|+..|++|+.|+.+.+||+.+|+....+..|.. .|+.+.|+.+...+++| .|..+++||.+... ++.
T Consensus 68 ---s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~a-----qVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s--~eP 137 (307)
T KOG0316|consen 68 ---SSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLA-----QVNTVRFNEESSVVASGSFDSSVRLWDCRSRS--FEP 137 (307)
T ss_pred ---cccccccccCCCCceEEEEEcccCeeeeecccccc-----eeeEEEecCcceEEEeccccceeEEEEcccCC--CCc
Confidence 66888999999999999999999999999998887 99999999999999966 99999999998743 223
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeE
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYI 290 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i 290 (304)
++.+ ......|.++..+. ..|++|+.||+++.||++.++.....-+ .+|++++|++||+.+++++ .|++|
T Consensus 138 iQil----dea~D~V~Si~v~~---heIvaGS~DGtvRtydiR~G~l~sDy~g--~pit~vs~s~d~nc~La~~-l~stl 207 (307)
T KOG0316|consen 138 IQIL----DEAKDGVSSIDVAE---HEIVAGSVDGTVRTYDIRKGTLSSDYFG--HPITSVSFSKDGNCSLASS-LDSTL 207 (307)
T ss_pred cchh----hhhcCceeEEEecc---cEEEeeccCCcEEEEEeecceeehhhcC--CcceeEEecCCCCEEEEee-cccee
Confidence 3333 33445688888754 4799999999999999999988766654 4799999999999999999 99999
Q ss_pred EEEecccceee
Q 022019 291 LCWDLRKAVQV 301 (304)
Q Consensus 291 ~vwd~~~~~~~ 301 (304)
++.|-.+|+.+
T Consensus 208 rLlDk~tGklL 218 (307)
T KOG0316|consen 208 RLLDKETGKLL 218 (307)
T ss_pred eecccchhHHH
Confidence 99999999765
No 29
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=100.00 E-value=6.4e-31 Score=198.55 Aligned_cols=221 Identities=20% Similarity=0.352 Sum_probs=180.9
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccc---------cccccCCccceEEEeecCCeEEEE
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNAC---------SLAKDQDSYEASLVVTEGESVYDF 125 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~v~~~ 125 (304)
...||...|-+++..++|..+++|+.|.+|+||+...... .+.... ...............+|..+|.++
T Consensus 188 ~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~-~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V 266 (423)
T KOG0313|consen 188 VCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEE-DELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSV 266 (423)
T ss_pred HhcccccceeEEEecCCCCeEEeecccceeeecccCCCcc-ccccccchhhhhhhhhhhcccccCceEEecccccceeeE
Confidence 4459999999999999999999999999999999332211 111100 001122333445677899999999
Q ss_pred eecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCC
Q 022019 126 CWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRP 204 (304)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~ 204 (304)
.|.+ ...+.+++.|.+|+.||+.++.....+.... .+.+++++|...+|++| .|..|++||.|.+
T Consensus 267 ~w~d--------~~v~yS~SwDHTIk~WDletg~~~~~~~~~k------sl~~i~~~~~~~Ll~~gssdr~irl~DPR~~ 332 (423)
T KOG0313|consen 267 VWSD--------ATVIYSVSWDHTIKVWDLETGGLKSTLTTNK------SLNCISYSPLSKLLASGSSDRHIRLWDPRTG 332 (423)
T ss_pred EEcC--------CCceEeecccceEEEEEeecccceeeeecCc------ceeEeecccccceeeecCCCCceeecCCCCC
Confidence 9943 4579999999999999999999888877665 78999999999999976 9999999999986
Q ss_pred CccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce-EeEEeccccCCeEEEEECCCCcEEEEe
Q 022019 205 GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME-LLYVLHGQEGGVTHVQFSRDGNYLYTG 283 (304)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~ 283 (304)
+.. .....+.+|...|.++.|+|.+...|++|+.|+++++||.++.+ ++..+.+|...|.++.|+ ++..|++|
T Consensus 333 ~gs-----~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~-~~~~IvSG 406 (423)
T KOG0313|consen 333 DGS-----VVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN-EGGLIVSG 406 (423)
T ss_pred CCc-----eeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEecc-CCceEEec
Confidence 543 33344578999999999999889999999999999999999887 999999999999999998 56789999
Q ss_pred eccCCeEEEEeccc
Q 022019 284 GRKDPYILCWDLRK 297 (304)
Q Consensus 284 ~~~d~~i~vwd~~~ 297 (304)
| .|++|+++.-..
T Consensus 407 G-aD~~l~i~~~~~ 419 (423)
T KOG0313|consen 407 G-ADNKLRIFKGSP 419 (423)
T ss_pred c-CcceEEEecccc
Confidence 9 999999997653
No 30
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.98 E-value=4.1e-31 Score=201.81 Aligned_cols=241 Identities=17% Similarity=0.270 Sum_probs=172.5
Q ss_pred chhhcHHhhccccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccc
Q 022019 18 DTEVTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYD 97 (304)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~ 97 (304)
...+.++++.+...-.|. +..... ++..+++.+|..+|.-+.||||.++|++|+.|..+++||+.++.....
T Consensus 235 nGkyLAsaSkD~Taiiw~-----v~~d~~---~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~ 306 (519)
T KOG0293|consen 235 NGKYLASASKDSTAIIWI-----VVYDVH---FKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHL 306 (519)
T ss_pred CCeeEeeccCCceEEEEE-----EecCcc---eeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhh
Confidence 344555566666655553 232222 355668999999999999999999999999999999999998865432
Q ss_pred cccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCe------------------
Q 022019 98 VNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGL------------------ 159 (304)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~------------------ 159 (304)
... .++..+.+++| .|||..+++|+.|+.|..||+....
T Consensus 307 y~~----------------~~~~S~~sc~W-------~pDg~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait 363 (519)
T KOG0293|consen 307 YPS----------------GLGFSVSSCAW-------CPDGFRFVTGSPDRTIIMWDLDGNILGNWEGVRDPKVHDLAIT 363 (519)
T ss_pred ccc----------------CcCCCcceeEE-------ccCCceeEecCCCCcEEEecCCcchhhcccccccceeEEEEEc
Confidence 211 12356667777 5577778888888888777775310
Q ss_pred ----eeEEeeccc--------------ccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccc
Q 022019 160 ----LRCTYRAYD--------------AVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEG 220 (304)
Q Consensus 160 ----~~~~~~~~~--------------~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~ 220 (304)
.+.....+. ......+|+++..+.+++++++. .+..+.+||+... . .+... .|
T Consensus 364 ~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~-~---lv~kY----~G 435 (519)
T KOG0293|consen 364 YDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEEN-K---LVRKY----FG 435 (519)
T ss_pred CCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchh-h---HHHHh----hc
Confidence 000000000 01123489999999999999988 9999999999742 1 11222 23
Q ss_pred cc--cceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCc-EEEEeeccCCeEEEEeccc
Q 022019 221 QA--GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN-YLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 221 ~~--~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~d~~i~vwd~~~ 297 (304)
|. ..+-.-+|-..+..++++||+|+.|+||+..+++++..+.||...|++++|+|..+ ++|++| +||+|++|....
T Consensus 436 hkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASas-DDgtIRIWg~~~ 514 (519)
T KOG0293|consen 436 HKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASAS-DDGTIRIWGPSD 514 (519)
T ss_pred ccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccC-CCCeEEEecCCc
Confidence 32 22444567664557999999999999999999999999999999999999999765 577888 999999998764
Q ss_pred c
Q 022019 298 A 298 (304)
Q Consensus 298 ~ 298 (304)
.
T Consensus 515 ~ 515 (519)
T KOG0293|consen 515 N 515 (519)
T ss_pred c
Confidence 3
No 31
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.98 E-value=1.2e-30 Score=216.55 Aligned_cols=221 Identities=16% Similarity=0.292 Sum_probs=183.7
Q ss_pred cceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecC
Q 022019 50 YNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP 129 (304)
Q Consensus 50 ~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 129 (304)
...+..+..|.++|.+++|+|++.+|++|+.|..|+||+.++..+.... .+|-..|..+.|++
T Consensus 41 ~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL-----------------~GHlDYVRt~~FHh 103 (1202)
T KOG0292|consen 41 GTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTL-----------------LGHLDYVRTVFFHH 103 (1202)
T ss_pred hhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhh-----------------ccccceeEEeeccC
Confidence 3444578899999999999999999999999999999999877654433 34557788887744
Q ss_pred ccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcCCeEEEEEcCCCCccc
Q 022019 130 HMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDF 208 (304)
Q Consensus 130 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~~i~v~d~~~~~~~~ 208 (304)
.--+++++|+|.+|+||++.+++++..+++|.+ -|+|..|+|....+++ +-|.+|+|||+.......
T Consensus 104 -------eyPWIlSASDDQTIrIWNwqsr~~iavltGHnH-----YVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~ 171 (1202)
T KOG0292|consen 104 -------EYPWILSASDDQTIRIWNWQSRKCIAVLTGHNH-----YVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKN 171 (1202)
T ss_pred -------CCceEEEccCCCeEEEEeccCCceEEEEecCce-----EEEeeccCCccceEEEecccceEEEEeecchhccC
Confidence 555899999999999999999999999998887 9999999998888885 599999999996421100
Q ss_pred ---e--------------e----eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce--EeEEecccc
Q 022019 209 ---E--------------K----YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYVLHGQE 265 (304)
Q Consensus 209 ---~--------------~----~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~ 265 (304)
. . -..++....+|...|.-++|+| .-.+|++|+.|..|++|....-+ .+.+..+|.
T Consensus 172 ~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhp-TlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~ 250 (1202)
T KOG0292|consen 172 KAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHP-TLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHY 250 (1202)
T ss_pred CCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecC-CcceEEecCCcceeeEEEeccccceeehhhhccc
Confidence 0 0 1123455688999999999999 67799999999999999986544 466788999
Q ss_pred CCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 266 GGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 266 ~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+.|.++-|+|....|++.| .|++|+|||+...+.+
T Consensus 251 nnVssvlfhp~q~lIlSns-EDksirVwDm~kRt~v 285 (1202)
T KOG0292|consen 251 NNVSSVLFHPHQDLILSNS-EDKSIRVWDMTKRTSV 285 (1202)
T ss_pred CCcceEEecCccceeEecC-CCccEEEEecccccce
Confidence 9999999999999999999 9999999999876554
No 32
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.98 E-value=6e-31 Score=188.84 Aligned_cols=206 Identities=22% Similarity=0.366 Sum_probs=169.7
Q ss_pred CCCceeEEEEcCC-CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC
Q 022019 59 PNNFLKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (304)
Q Consensus 59 h~~~V~~i~~s~~-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (304)
-.+.+..++|+++ .+.+++++.||+++|||+... .........|...|+++.|.+. .
T Consensus 59 ~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~----------------s~Pi~~~kEH~~EV~Svdwn~~------~ 116 (311)
T KOG0277|consen 59 TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMP----------------SKPIHKFKEHKREVYSVDWNTV------R 116 (311)
T ss_pred cccceeEeeecCCCcceEEEEecCceEEEeccCCC----------------CcchhHHHhhhhheEEeccccc------c
Confidence 3567999999994 457888999999999996422 1122345567789999999764 5
Q ss_pred ccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCC-CcEEE-EEcCCeEEEEEcCCCCccceeeeeee
Q 022019 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT-GTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLK 215 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~ 215 (304)
++.+++++.|++|++|+...++.++++.++.. .|+...|+|. .+.++ ++.|+++++||++.+++...
T Consensus 117 r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~-----~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~------ 185 (311)
T KOG0277|consen 117 RRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNS-----CIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMS------ 185 (311)
T ss_pred ceeEEeeccCCceEeecCCCCcceEeecCCcc-----EEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeE------
Confidence 67788899999999999999999999887665 9999999995 55666 55999999999998643222
Q ss_pred ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc-eEeEEeccccCCeEEEEECCCC-cEEEEeeccCCeEEEE
Q 022019 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM-ELLYVLHGQEGGVTHVQFSRDG-NYLYTGGRKDPYILCW 293 (304)
Q Consensus 216 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~d~~i~vw 293 (304)
...|...+.++.|+..+..++++|+.|+.|+.||+++. .++..+.+|.-.|..+.|||.. ..|++++ .|-++++|
T Consensus 186 --i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSas-YDmT~riw 262 (311)
T KOG0277|consen 186 --IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASAS-YDMTVRIW 262 (311)
T ss_pred --EEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhcc-ccceEEec
Confidence 26677889999999988899999999999999999985 4889999999999999999976 4677888 99999999
Q ss_pred eccccee
Q 022019 294 DLRKAVQ 300 (304)
Q Consensus 294 d~~~~~~ 300 (304)
|...+..
T Consensus 263 ~~~~~ds 269 (311)
T KOG0277|consen 263 DPERQDS 269 (311)
T ss_pred ccccchh
Confidence 9986543
No 33
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.97 E-value=5.4e-32 Score=202.66 Aligned_cols=198 Identities=17% Similarity=0.300 Sum_probs=165.3
Q ss_pred eeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 54 RTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 54 ~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
+.+.||++.|.|+.|. .+.+++|+.|.+|+|||+.+++... ..++|...|..+.|
T Consensus 231 ~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~-----------------tlihHceaVLhlrf------ 285 (499)
T KOG0281|consen 231 KILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLN-----------------TLIHHCEAVLHLRF------ 285 (499)
T ss_pred HhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhh-----------------HHhhhcceeEEEEE------
Confidence 3788999999999995 5699999999999999999887643 34556688988888
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCeee---EEeecccccccccceEEEEECCCCcEEEE-EcCCeEEEEEcCCCCccce
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGLLR---CTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~~i~v~d~~~~~~~~~ 209 (304)
++.++++++.|.++.+||+...... ..+.+| ...|+.+.|+ .++|++ +.|.+|++|++.+
T Consensus 286 ---~ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGH-----rAaVNvVdfd--~kyIVsASgDRTikvW~~st------ 349 (499)
T KOG0281|consen 286 ---SNGYMVTCSKDRSIAVWDMASPTDITLRRVLVGH-----RAAVNVVDFD--DKYIVSASGDRTIKVWSTST------ 349 (499)
T ss_pred ---eCCEEEEecCCceeEEEeccCchHHHHHHHHhhh-----hhheeeeccc--cceEEEecCCceEEEEeccc------
Confidence 5569999999999999999875422 233333 3489999987 458884 5999999999987
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCe
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPY 289 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~ 289 (304)
..+.....+|...|.|+.+ .++++++|+.|.+|++||+..|.++..+.||+.-|.++.|. .+.+++|+ .||+
T Consensus 350 --~efvRtl~gHkRGIAClQY---r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd--~krIVSGa-YDGk 421 (499)
T KOG0281|consen 350 --CEFVRTLNGHKRGIACLQY---RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGA-YDGK 421 (499)
T ss_pred --eeeehhhhcccccceehhc---cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeec--Cceeeecc-ccce
Confidence 4444555888888888877 45699999999999999999999999999999999999994 67899999 9999
Q ss_pred EEEEeccccee
Q 022019 290 ILCWDLRKAVQ 300 (304)
Q Consensus 290 i~vwd~~~~~~ 300 (304)
|++||+.++..
T Consensus 422 ikvWdl~aald 432 (499)
T KOG0281|consen 422 IKVWDLQAALD 432 (499)
T ss_pred EEEEecccccC
Confidence 99999988754
No 34
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=1.6e-30 Score=195.48 Aligned_cols=206 Identities=18% Similarity=0.289 Sum_probs=176.2
Q ss_pred ceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 51 NQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
...+.+.+|...|.+++|-|.|.++++++.|.+|+.|+++++-..+.+.. |..-|..+.
T Consensus 184 ~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~-----------------h~ewvr~v~---- 242 (406)
T KOG0295|consen 184 RCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPG-----------------HSEWVRMVR---- 242 (406)
T ss_pred HHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccC-----------------chHhEEEEE----
Confidence 44557889999999999999999999999999999999998765444333 334444443
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCC---------------cEEEEE-cCC
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG---------------TKIFAG-YNK 194 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~---------------~~l~~~-~d~ 194 (304)
.+.||.++++++.|.++++|-+.++++...++.|.. +|.+++|-|.. .++.++ .|+
T Consensus 243 ---v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh-----~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDk 314 (406)
T KOG0295|consen 243 ---VNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEH-----PVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDK 314 (406)
T ss_pred ---ecCCeeEEEecCCCceEEEEEeccchhhhhhhcccc-----ceEEEEecccccCcchhhccCCCCCccEEEeecccc
Confidence 377999999999999999999999988888887776 88899997631 366655 999
Q ss_pred eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEEC
Q 022019 195 SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFS 274 (304)
Q Consensus 195 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 274 (304)
+|++||+.++ .....+.+|...|..++|+| +|++|+++.+|+++++||+++.+++.++..|..-|+++.|+
T Consensus 315 tIk~wdv~tg--------~cL~tL~ghdnwVr~~af~p-~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh 385 (406)
T KOG0295|consen 315 TIKIWDVSTG--------MCLFTLVGHDNWVRGVAFSP-GGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFH 385 (406)
T ss_pred eEEEEeccCC--------eEEEEEecccceeeeeEEcC-CCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecC
Confidence 9999999884 22233378999999999999 99999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeeccCCeEEEEec
Q 022019 275 RDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 275 ~~~~~l~~~~~~d~~i~vwd~ 295 (304)
.+..++++|+ -|.++++|.-
T Consensus 386 ~~~p~VvTGs-Vdqt~KvwEc 405 (406)
T KOG0295|consen 386 KTAPYVVTGS-VDQTVKVWEC 405 (406)
T ss_pred CCCceEEecc-ccceeeeeec
Confidence 9999999999 9999999975
No 35
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.97 E-value=5e-30 Score=188.22 Aligned_cols=228 Identities=17% Similarity=0.185 Sum_probs=178.7
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcccccccccc-----c-----------cCCccceEEEe
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLA-----K-----------DQDSYEASLVV 116 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~-----~-----------~~~~~~~~~~~ 116 (304)
+..+++|+++|..+.|.+|++.+++++.|.+|+.||..+++........... + ..+........
T Consensus 83 ~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~ 162 (338)
T KOG0265|consen 83 FWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDI 162 (338)
T ss_pred eeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEee
Confidence 4477899999999999999999999999999999999998765443222100 0 01111111111
Q ss_pred e---------cCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcE
Q 022019 117 T---------EGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTK 187 (304)
Q Consensus 117 ~---------~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 187 (304)
. ....++++. |..++..+++|+-|+.|++||++.+....++.++.. .|+.+..+|+|.+
T Consensus 163 R~k~~~~t~~~kyqltAv~-------f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~D-----tIt~lsls~~gs~ 230 (338)
T KOG0265|consen 163 RKKEAIKTFENKYQLTAVG-------FKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHAD-----TITGLSLSRYGSF 230 (338)
T ss_pred cccchhhccccceeEEEEE-------ecccccceeeccccCceeeeccccCcceEEeecccC-----ceeeEEeccCCCc
Confidence 1 123444444 477888899999999999999999999999988776 9999999999999
Q ss_pred EEE-EcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccC
Q 022019 188 IFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEG 266 (304)
Q Consensus 188 l~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 266 (304)
+.+ +.|.++++||++.-......+................++|+| ++..+.+|+.|..+++||......+..+.||.+
T Consensus 231 llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp-~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~g 309 (338)
T KOG0265|consen 231 LLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSP-NGTKITAGSADRFVYVWDTTSRRILYKLPGHYG 309 (338)
T ss_pred cccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccC-CCCccccccccceEEEeecccccEEEEcCCcce
Confidence 996 599999999998644443434444443333344467889999 788999999999999999998899999999999
Q ss_pred CeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 267 GVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 267 ~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
.|.++.|+|...+|.+++ .|.+|++=+
T Consensus 310 svn~~~Fhp~e~iils~~-sdk~i~lge 336 (338)
T KOG0265|consen 310 SVNEVDFHPTEPIILSCS-SDKTIYLGE 336 (338)
T ss_pred eEEEeeecCCCcEEEEec-cCceeEeec
Confidence 999999999999999999 999998744
No 36
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=6.4e-29 Score=183.81 Aligned_cols=229 Identities=17% Similarity=0.254 Sum_probs=176.0
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccc---------------------------cccC
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSL---------------------------AKDQ 107 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~---------------------------~~~~ 107 (304)
.+..-.+.|+++.|+++|.+|++++.|.+++|||..+++....+..... ..-.
T Consensus 9 ~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~ 88 (311)
T KOG1446|consen 9 VFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLH 88 (311)
T ss_pred ccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEee
Confidence 3444567899999999999999999999999999988876444333211 1112
Q ss_pred CccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcE
Q 022019 108 DSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTK 187 (304)
Q Consensus 108 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 187 (304)
++...+...+|...|..++. +|-+..+++++.|++|++||++..++...+..... ..++|+|+|-+
T Consensus 89 dNkylRYF~GH~~~V~sL~~-------sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~-------pi~AfDp~GLi 154 (311)
T KOG1446|consen 89 DNKYLRYFPGHKKRVNSLSV-------SPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGR-------PIAAFDPEGLI 154 (311)
T ss_pred cCceEEEcCCCCceEEEEEe-------cCCCCeEEecccCCeEEeeEecCCCCceEEecCCC-------cceeECCCCcE
Confidence 33333445566677777765 77788999999999999999998777766655432 36899999999
Q ss_pred EEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccC
Q 022019 188 IFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEG 266 (304)
Q Consensus 188 l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 266 (304)
+|++ ....|++||+|.-+........+. .+.....+.+.|+| +|+.++.++..+.+++.|.-.|..+.++.++..
T Consensus 155 fA~~~~~~~IkLyD~Rs~dkgPF~tf~i~---~~~~~ew~~l~FS~-dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~ 230 (311)
T KOG1446|consen 155 FALANGSELIKLYDLRSFDKGPFTTFSIT---DNDEAEWTDLEFSP-DGKSILLSTNASFIYLLDAFDGTVKSTFSGYPN 230 (311)
T ss_pred EEEecCCCeEEEEEecccCCCCceeEccC---CCCccceeeeEEcC-CCCEEEEEeCCCcEEEEEccCCcEeeeEeeccC
Confidence 9977 445999999997533222212221 23455689999999 788888899999999999999999999987765
Q ss_pred Ce---EEEEECCCCcEEEEeeccCCeEEEEecccceeee
Q 022019 267 GV---THVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 267 ~v---~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
.- .+..|+||++++++|+ .||+|.+|++++|+++.
T Consensus 231 ~~~~~~~a~ftPds~Fvl~gs-~dg~i~vw~~~tg~~v~ 268 (311)
T KOG1446|consen 231 AGNLPLSATFTPDSKFVLSGS-DDGTIHVWNLETGKKVA 268 (311)
T ss_pred CCCcceeEEECCCCcEEEEec-CCCcEEEEEcCCCcEee
Confidence 42 6788999999999999 99999999999998764
No 37
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=9.9e-31 Score=212.80 Aligned_cols=240 Identities=15% Similarity=0.185 Sum_probs=191.5
Q ss_pred hcHHhhccccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCC-CeEEEecCCCeEEEeeCCCCCCccccc
Q 022019 21 VTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDG-SSFLTSSEDKTLRIFSLPENGISYDVN 99 (304)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~ 99 (304)
+..+++.|.....|+. +-...+ .-.+....+|.+.|.+++++..+ .+|+++|.|+++++|++...+....
T Consensus 379 llat~sKD~svilWr~---~~~~~~----~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~-- 449 (775)
T KOG0319|consen 379 LLATGSKDKSVILWRL---NNNCSK----SLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAF-- 449 (775)
T ss_pred EEEEecCCceEEEEEe---cCCcch----hhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccc--
Confidence 4556677777777754 111111 12234678999999999998744 5899999999999999975211100
Q ss_pred cccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEE
Q 022019 100 ACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSV 179 (304)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i 179 (304)
.. ..........|...|.+++. +|+..++++||.|++.+||++.......++.+|.. .|+++
T Consensus 450 ~~------~~~~~~t~~aHdKdIN~Vai-------a~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~R-----Gvw~V 511 (775)
T KOG0319|consen 450 PI------VLTCRYTERAHDKDINCVAI-------APNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTR-----GVWCV 511 (775)
T ss_pred cc------eehhhHHHHhhcccccceEe-------cCCCceEEecccccceeeecccCceEEEEeeCCcc-----ceEEE
Confidence 00 00001123457778888866 78999999999999999999999888899988776 99999
Q ss_pred EECCCCcEEEE-EcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEe
Q 022019 180 AFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELL 258 (304)
Q Consensus 180 ~~~~~~~~l~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~ 258 (304)
.|+|..+.+++ +.|.+|+||.+.+ ......+.+|...|..+.|-. ++..|++++.||.|++|+++++.++
T Consensus 512 ~Fs~~dq~laT~SgD~TvKIW~is~--------fSClkT~eGH~~aVlra~F~~-~~~qliS~~adGliKlWnikt~eC~ 582 (775)
T KOG0319|consen 512 SFSKNDQLLATCSGDKTVKIWSIST--------FSCLKTFEGHTSAVLRASFIR-NGKQLISAGADGLIKLWNIKTNECE 582 (775)
T ss_pred EeccccceeEeccCCceEEEEEecc--------ceeeeeecCccceeEeeeeee-CCcEEEeccCCCcEEEEeccchhhh
Confidence 99999999995 5999999999987 333334489999999999999 7789999999999999999999999
Q ss_pred EEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 259 YVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 259 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
.++.+|...|++++-+|.+.+++||+ .||.|.+|.=.+
T Consensus 583 ~tlD~H~DrvWaL~~~~~~~~~~tgg-~Dg~i~~wkD~T 620 (775)
T KOG0319|consen 583 MTLDAHNDRVWALSVSPLLDMFVTGG-GDGRIIFWKDVT 620 (775)
T ss_pred hhhhhccceeEEEeecCccceeEecC-CCeEEEEeecCc
Confidence 99999999999999999999999999 999999996443
No 38
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.97 E-value=3.2e-31 Score=205.96 Aligned_cols=232 Identities=19% Similarity=0.265 Sum_probs=180.5
Q ss_pred hcHHhhccccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcccccc
Q 022019 21 VTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNA 100 (304)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 100 (304)
+..+++.+...++|.+ -. ..+.++++.+|+.+|.+++|+++|..|+|++.|+.|++||++++...
T Consensus 229 LlLS~gmD~~vklW~v-----y~-----~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~----- 293 (503)
T KOG0282|consen 229 LLLSGGMDGLVKLWNV-----YD-----DRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVL----- 293 (503)
T ss_pred EEEecCCCceEEEEEE-----ec-----CcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEE-----
Confidence 3344555555555543 22 22345588899999999999999999999999999999999987653
Q ss_pred ccccccCCccceEEEeecCCeEEEEeecCccceeCCCc-cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEE
Q 022019 101 CSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS-CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSV 179 (304)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i 179 (304)
..+..+..++++.|+| ++ +.|++|+.|+.|+.||+++++.++.+..+-. .|..+
T Consensus 294 -------------~~f~~~~~~~cvkf~p-------d~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg-----~i~~i 348 (503)
T KOG0282|consen 294 -------------SRFHLDKVPTCVKFHP-------DNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLG-----AILDI 348 (503)
T ss_pred -------------EEEecCCCceeeecCC-------CCCcEEEEecCCCcEEEEeccchHHHHHHHhhhh-----heeee
Confidence 3344456677777755 54 7899999999999999999998877765554 89999
Q ss_pred EECCCCcEEEE-EcCCeEEEEEcCCCCccc-------------------------------eeee-------eeeccccc
Q 022019 180 AFNPTGTKIFA-GYNKSVRVFDVHRPGRDF-------------------------------EKYS-------TLKGNKEG 220 (304)
Q Consensus 180 ~~~~~~~~l~~-~~d~~i~v~d~~~~~~~~-------------------------------~~~~-------~~~~~~~~ 220 (304)
.|-++|+.+++ +.|++++||+.+.+-... ..+. .....+.+
T Consensus 349 ~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feG 428 (503)
T KOG0282|consen 349 TFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEG 428 (503)
T ss_pred EEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcc
Confidence 99999999995 499999999987642100 0000 00012233
Q ss_pred cc--cceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCC-cEEEEeeccCCeEEEEe
Q 022019 221 QA--GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDG-NYLYTGGRKDPYILCWD 294 (304)
Q Consensus 221 ~~--~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~d~~i~vwd 294 (304)
|. +.-..+.||| ++.+|++|+.||.+.+||.++-+.+..+++|.+.+..+.|+|.. ..+++++ .||.|++||
T Consensus 429 h~vaGys~~v~fSp-DG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~-w~G~Ikiwd 503 (503)
T KOG0282|consen 429 HSVAGYSCQVDFSP-DGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCG-WDGLIKIWD 503 (503)
T ss_pred eeccCceeeEEEcC-CCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecc-cCceeEecC
Confidence 43 3356789999 78899999999999999999999999999999999999999965 4688888 999999996
No 39
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.97 E-value=4.6e-29 Score=187.71 Aligned_cols=224 Identities=13% Similarity=0.212 Sum_probs=178.0
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
..++|+...+.... .+.+|++.|+++.|+.+|.+||||+.+|.|+||+..++.....+
T Consensus 87 ~AflW~~~~ge~~~------eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~---------------- 144 (399)
T KOG0296|consen 87 LAFLWDISTGEFAG------ELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKL---------------- 144 (399)
T ss_pred eEEEEEccCCccee------EecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEe----------------
Confidence 34567766665333 78899999999999999999999999999999999876442221
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d 193 (304)
......+.=++| +|-+..|+.|+.||.+.+|.+.++...+.+..+.. ++++=.|.|+|+.++++ .|
T Consensus 145 -~~e~~dieWl~W-------Hp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~-----~ct~G~f~pdGKr~~tgy~d 211 (399)
T KOG0296|consen 145 -DQEVEDIEWLKW-------HPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNS-----PCTCGEFIPDGKRILTGYDD 211 (399)
T ss_pred -ecccCceEEEEe-------cccccEEEeecCCCcEEEEECCCcceeeEecCCCC-----CcccccccCCCceEEEEecC
Confidence 122244555666 55677999999999999999998777777777665 89999999999999987 99
Q ss_pred CeEEEEEcCCCCccceee---------------------------------------eeee-------------------
Q 022019 194 KSVRVFDVHRPGRDFEKY---------------------------------------STLK------------------- 215 (304)
Q Consensus 194 ~~i~v~d~~~~~~~~~~~---------------------------------------~~~~------------------- 215 (304)
|+|++|+..+........ ....
T Consensus 212 gti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~ 291 (399)
T KOG0296|consen 212 GTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVES 291 (399)
T ss_pred ceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhh
Confidence 999999997643111000 0000
Q ss_pred -----------------------------ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccC
Q 022019 216 -----------------------------GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEG 266 (304)
Q Consensus 216 -----------------------------~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 266 (304)
...-.|..+|+.+.|-+ ..+|++++.||.|+.||.++|++..++.||..
T Consensus 292 ~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~~--t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~ 369 (399)
T KOG0296|consen 292 IPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLKWLN--TDYLLTACANGKVRQWDARTGQLKFTYTGHQM 369 (399)
T ss_pred cccccccchhhcccccceEEEEecccchhheeccCCCceEEEEEcC--cchheeeccCceEEeeeccccceEEEEecCch
Confidence 01123555688899987 44889999999999999999999999999999
Q ss_pred CeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 267 GVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 267 ~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
.|.+++++|++++++|++ .|++.+||++.
T Consensus 370 ~Il~f~ls~~~~~vvT~s-~D~~a~VF~v~ 398 (399)
T KOG0296|consen 370 GILDFALSPQKRLVVTVS-DDNTALVFEVP 398 (399)
T ss_pred heeEEEEcCCCcEEEEec-CCCeEEEEecC
Confidence 999999999999999999 99999999874
No 40
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=3.2e-30 Score=209.85 Aligned_cols=219 Identities=21% Similarity=0.286 Sum_probs=176.4
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+.||...|.++....+|.+|+||+.|.++++|.++++... .........|...|.+++....
T Consensus 360 ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~-------------~~~~a~~~gH~~svgava~~~~---- 422 (775)
T KOG0319|consen 360 IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSK-------------SLCVAQANGHTNSVGAVAGSKL---- 422 (775)
T ss_pred EEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcch-------------hhhhhhhcccccccceeeeccc----
Confidence 67899999999996667889999999999999998433221 1111133456677888877332
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeE---Eeec-ccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccce
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRC---TYRA-YDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~~-~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~ 209 (304)
.-..|+++|.|+++++|++...+... .+.. .....|...|++++++|+.+++++| .|.+.+||++..
T Consensus 423 --~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~------ 494 (775)
T KOG0319|consen 423 --GASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQ------ 494 (775)
T ss_pred --CccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccC------
Confidence 22479999999999999998622211 1110 0112345589999999999999976 999999999974
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCe
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPY 289 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~ 289 (304)
..+...+.+|...+.++.|+| ..++++++|.|.+|+||.+.+..++.+|.||...|..+.|-.+|+.|++++ .||-
T Consensus 495 --~~l~~vLsGH~RGvw~V~Fs~-~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~-adGl 570 (775)
T KOG0319|consen 495 --LRLLGVLSGHTRGVWCVSFSK-NDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAG-ADGL 570 (775)
T ss_pred --ceEEEEeeCCccceEEEEecc-ccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEecc-CCCc
Confidence 444555589999999999999 778999999999999999999999999999999999999999999999999 9999
Q ss_pred EEEEecccceeee
Q 022019 290 ILCWDLRKAVQVV 302 (304)
Q Consensus 290 i~vwd~~~~~~~~ 302 (304)
|++|++++++|+.
T Consensus 571 iKlWnikt~eC~~ 583 (775)
T KOG0319|consen 571 IKLWNIKTNECEM 583 (775)
T ss_pred EEEEeccchhhhh
Confidence 9999999988763
No 41
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.97 E-value=9.9e-29 Score=195.46 Aligned_cols=208 Identities=27% Similarity=0.384 Sum_probs=172.0
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+.+|.++|++++|+|++++|++++.||.+++|++.++.. ......+...+..+.|
T Consensus 4 ~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~-----------------~~~~~~~~~~i~~~~~------- 59 (289)
T cd00200 4 TLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGEL-----------------LRTLKGHTGPVRDVAA------- 59 (289)
T ss_pred HhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCc-----------------EEEEecCCcceeEEEE-------
Confidence 5678999999999999999999999999999999985532 1122334456667777
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
+|+++.+++++.||.|++||+.+++....+..+.. .+.++.|+|++++++++ .++.|++||++... ....
T Consensus 60 ~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~ 130 (289)
T cd00200 60 SADGTYLASGSSDKTIRLWDLETGECVRTLTGHTS-----YVSSVAFSPDGRILSSSSRDKTIKVWDVETGK----CLTT 130 (289)
T ss_pred CCCCCEEEEEcCCCeEEEEEcCcccceEEEeccCC-----cEEEEEEcCCCCEEEEecCCCeEEEEECCCcE----EEEE
Confidence 66778999999999999999998777766665443 79999999998888877 59999999997521 1111
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEE
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCW 293 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vw 293 (304)
...|...+.+++|+| ++.++++++.||.|++||++.++++..+..|...+.++.|+|+++.+++++ .|+.|++|
T Consensus 131 ----~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~i~i~ 204 (289)
T cd00200 131 ----LRGHTDWVNSVAFSP-DGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSS-SDGTIKLW 204 (289)
T ss_pred ----eccCCCcEEEEEEcC-cCCEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEec-CCCcEEEE
Confidence 235677899999999 577888888899999999999999999999998999999999999999999 89999999
Q ss_pred ecccceee
Q 022019 294 DLRKAVQV 301 (304)
Q Consensus 294 d~~~~~~~ 301 (304)
|+++++.+
T Consensus 205 d~~~~~~~ 212 (289)
T cd00200 205 DLSTGKCL 212 (289)
T ss_pred ECCCCcee
Confidence 99876544
No 42
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=3.6e-29 Score=204.37 Aligned_cols=210 Identities=20% Similarity=0.394 Sum_probs=174.4
Q ss_pred ceeeeecCCCCceeEEEEcCCCCeEEEecC-CCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecC
Q 022019 51 NQFRTSSIPNNFLKGIKWSPDGSSFLTSSE-DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP 129 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~-dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 129 (304)
..++.+.-...+|..+.|+..|.+||.|+. =|.+.||++..+....+.. +|-..+.++++
T Consensus 298 ~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQ-----------------gH~~~i~~l~Y-- 358 (893)
T KOG0291|consen 298 NLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQ-----------------GHSDRITSLAY-- 358 (893)
T ss_pred eEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeecc-----------------ccccceeeEEE--
Confidence 344456666678999999999999999876 4899999998765543322 34467888877
Q ss_pred ccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcCCeEEEEEcCCCCccc
Q 022019 130 HMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDF 208 (304)
Q Consensus 130 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~~i~v~d~~~~~~~~ 208 (304)
+|||+++++|++||.|+|||..++-+..++..|.. .|+.+.|+..|+.+++ +.||+|+.||+... +.+
T Consensus 359 -----SpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts-----~Vt~v~f~~~g~~llssSLDGtVRAwDlkRY-rNf 427 (893)
T KOG0291|consen 359 -----SPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTS-----GVTAVQFTARGNVLLSSSLDGTVRAWDLKRY-RNF 427 (893)
T ss_pred -----CCCCcEEEeccCCCcEEEEeccCceEEEEeccCCC-----ceEEEEEEecCCEEEEeecCCeEEeeeeccc-cee
Confidence 88999999999999999999999999999998776 9999999999999995 49999999999752 222
Q ss_pred eeeeeeeccccccccceeEEEeecCCCcEEEEEecCCe-EEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccC
Q 022019 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQT-SAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKD 287 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d 287 (304)
.++. ........+++..| .+.++++|+.|.. |.+|+.++|+.+..+.||+++|.+++|+|+|..|++++ .|
T Consensus 428 ---RTft---~P~p~QfscvavD~-sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~S-WD 499 (893)
T KOG0291|consen 428 ---RTFT---SPEPIQFSCVAVDP-SGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGS-WD 499 (893)
T ss_pred ---eeec---CCCceeeeEEEEcC-CCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEecc-cc
Confidence 2222 22233467899999 7878888888865 99999999999999999999999999999999999999 99
Q ss_pred CeEEEEecccc
Q 022019 288 PYILCWDLRKA 298 (304)
Q Consensus 288 ~~i~vwd~~~~ 298 (304)
.+|++||+-..
T Consensus 500 kTVRiW~if~s 510 (893)
T KOG0291|consen 500 KTVRIWDIFSS 510 (893)
T ss_pred ceEEEEEeecc
Confidence 99999998543
No 43
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=1.4e-30 Score=187.01 Aligned_cols=207 Identities=20% Similarity=0.313 Sum_probs=170.2
Q ss_pred eeeecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 53 FRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
++.++.|...|.++.|++ ++..+++++.|++|++|+...... .....+|...|+...|+|.
T Consensus 97 i~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~S-----------------v~Tf~gh~~~Iy~a~~sp~- 158 (311)
T KOG0277|consen 97 IHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNS-----------------VQTFNGHNSCIYQAAFSPH- 158 (311)
T ss_pred hhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcc-----------------eEeecCCccEEEEEecCCC-
Confidence 447788999999999999 677888999999999999863322 2245567789999999887
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCC-cEEEEE-cCCeEEEEEcCCCCccce
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG-TKIFAG-YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~-~d~~i~v~d~~~~~~~~~ 209 (304)
..+++++++.|+++++||++..-....++.|.. .+.++.|+.-. +.+++| .|+.|++||++.-.
T Consensus 159 -----~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~-----Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r---- 224 (311)
T KOG0277|consen 159 -----IPNLFASASGDGTLRLWDVRSPGKFMSIEAHNS-----EILCCDWSKYNHNVLATGGVDNLVRGWDIRNLR---- 224 (311)
T ss_pred -----CCCeEEEccCCceEEEEEecCCCceeEEEeccc-----eeEeecccccCCcEEEecCCCceEEEEehhhcc----
Confidence 456999999999999999986544445776664 89999999855 555566 99999999998753
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC-ceEeEEeccccCCeEEEEECC-CCcEEEEeeccC
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-MELLYVLHGQEGGVTHVQFSR-DGNYLYTGGRKD 287 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~d 287 (304)
+......+|.-.|+.++|+|....+|++++.|=+++|||... ...+.+...|..-+..+.|++ ++.++|+++ -|
T Consensus 225 ---~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~g-WD 300 (311)
T KOG0277|consen 225 ---TPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTG-WD 300 (311)
T ss_pred ---ccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecc-cc
Confidence 333444789999999999998888999999999999999874 446777778888999999988 567899999 99
Q ss_pred CeEEEEec
Q 022019 288 PYILCWDL 295 (304)
Q Consensus 288 ~~i~vwd~ 295 (304)
+.++||+.
T Consensus 301 e~l~Vw~p 308 (311)
T KOG0277|consen 301 ELLYVWNP 308 (311)
T ss_pred cceeeecc
Confidence 99999985
No 44
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.97 E-value=5.1e-30 Score=183.83 Aligned_cols=203 Identities=20% Similarity=0.310 Sum_probs=169.2
Q ss_pred CCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (304)
.|+.-|..++|+.|.++|+||+.+..+||||++..+.... -...|...|..+.|.. .
T Consensus 98 ~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~----------------E~~ghtg~Ir~v~wc~-------e 154 (334)
T KOG0278|consen 98 EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPK----------------EISGHTGGIRTVLWCH-------E 154 (334)
T ss_pred hhhheeeeEEecccchhhhccchHHHhhhhhccCCCCCch----------------hhcCCCCcceeEEEec-------c
Confidence 5888899999999999999999999999999975433211 2234557788887742 4
Q ss_pred ccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeecc
Q 022019 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGN 217 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 217 (304)
.+.|++.++|++|++||.+++..++++.... +|+++.++++|++|..+..+.|.+||...- ..++.
T Consensus 155 D~~iLSSadd~tVRLWD~rTgt~v~sL~~~s------~VtSlEvs~dG~ilTia~gssV~Fwdaksf-------~~lKs- 220 (334)
T KOG0278|consen 155 DKCILSSADDKTVRLWDHRTGTEVQSLEFNS------PVTSLEVSQDGRILTIAYGSSVKFWDAKSF-------GLLKS- 220 (334)
T ss_pred CceEEeeccCCceEEEEeccCcEEEEEecCC------CCcceeeccCCCEEEEecCceeEEeccccc-------cceee-
Confidence 4567777999999999999999999988766 899999999999999999999999999763 11211
Q ss_pred ccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEe-ccccCCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 218 KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVL-HGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 218 ~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
......|.+..++| ...++++|++|..++.||..+++.+..+ ++|.++|.++.|+|+|..-++|+ .||+|++|.+.
T Consensus 221 -~k~P~nV~SASL~P-~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGS-EDGTirlWQt~ 297 (334)
T KOG0278|consen 221 -YKMPCNVESASLHP-KKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGS-EDGTIRLWQTT 297 (334)
T ss_pred -ccCccccccccccC-CCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccC-CCceEEEEEec
Confidence 11234488999999 6689999999999999999999988886 89999999999999999999999 99999999987
Q ss_pred ccee
Q 022019 297 KAVQ 300 (304)
Q Consensus 297 ~~~~ 300 (304)
.++.
T Consensus 298 ~~~~ 301 (334)
T KOG0278|consen 298 PGKT 301 (334)
T ss_pred CCCc
Confidence 6653
No 45
>PTZ00420 coronin; Provisional
Probab=99.97 E-value=5.1e-28 Score=201.99 Aligned_cols=216 Identities=13% Similarity=0.162 Sum_probs=154.7
Q ss_pred eeeeecCCCCceeEEEEcCC-CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 52 QFRTSSIPNNFLKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 52 ~~~~~~~h~~~V~~i~~s~~-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
.+..+.+|.+.|.+++|+|+ +.+|+||+.||+|+|||+.++...... ..........|...|.+++|
T Consensus 66 ~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~---------i~~p~~~L~gH~~~V~sVaf--- 133 (568)
T PTZ00420 66 PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKE---------IKDPQCILKGHKKKISIIDW--- 133 (568)
T ss_pred eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccc---------cccceEEeecCCCcEEEEEE---
Confidence 34578899999999999996 789999999999999999754221000 00111234567788999999
Q ss_pred cceeCCCcc-EEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccc
Q 022019 131 MSASDPTSC-VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDF 208 (304)
Q Consensus 131 ~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~ 208 (304)
+|++. ++++++.|++|++||+++++....+..+ ..|.+++|+|+|.+|+++ .|+.|+|||++... .
T Consensus 134 ----~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~------~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~-~- 201 (568)
T PTZ00420 134 ----NPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMP------KKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQE-I- 201 (568)
T ss_pred ----CCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecC------CcEEEEEECCCCCEEEEEecCCEEEEEECCCCc-E-
Confidence 45554 4678999999999999998876655422 279999999999999965 89999999998742 1
Q ss_pred eeeeeeeccccccccceeE-----EEeecCCCcEEEEEecCC----eEEEEecCC-ceEeEEec--cccCCeEEEEECCC
Q 022019 209 EKYSTLKGNKEGQAGIMSA-----IAFSPTHTGMLAIGSYSQ----TSAIYREDN-MELLYVLH--GQEGGVTHVQFSRD 276 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~-----~~~~p~~~~~l~~~~~dg----~i~i~d~~~-~~~~~~~~--~~~~~v~~~~~~~~ 276 (304)
... ..+|.+.+.+ ..|++ ++.+|++++.|+ .|+|||+++ .+++..+. .+.+.+......++
T Consensus 202 --i~t----l~gH~g~~~s~~v~~~~fs~-d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~t 274 (568)
T PTZ00420 202 --ASS----FHIHDGGKNTKNIWIDGLGG-DDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDEST 274 (568)
T ss_pred --EEE----EecccCCceeEEEEeeeEcC-CCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCC
Confidence 112 2455554332 33557 555777766664 799999995 55665554 23333444444566
Q ss_pred CcEEEEeeccCCeEEEEecccce
Q 022019 277 GNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 277 ~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
|.++++|+ .|+.|++|++..+.
T Consensus 275 g~l~lsGk-GD~tIr~~e~~~~~ 296 (568)
T PTZ00420 275 GLIYLIGK-GDGNCRYYQHSLGS 296 (568)
T ss_pred CCEEEEEE-CCCeEEEEEccCCc
Confidence 88888898 99999999997763
No 46
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=1.3e-28 Score=219.21 Aligned_cols=210 Identities=20% Similarity=0.317 Sum_probs=165.0
Q ss_pred ecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeC
Q 022019 56 SSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135 (304)
Q Consensus 56 ~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 135 (304)
+..|.+.|++++|+|+|++||+|+.|+.|+||++........ ..........+...+.+++|.|.
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~----------~~~~~~~~~~~~~~v~~l~~~~~----- 543 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGR----------DIHYPVVELASRSKLSGICWNSY----- 543 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCccccccc----------ccccceEEecccCceeeEEeccC-----
Confidence 446999999999999999999999999999999764211000 00011122333467888888542
Q ss_pred CCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECC-CCcEEEEE-cCCeEEEEEcCCCCccceeeee
Q 022019 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP-TGTKIFAG-YNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 136 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
++.+|++++.||+|++||+.+++....+..|.. .|++++|+| ++.+|++| .|+.|++||++... ....
T Consensus 544 -~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~-----~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~----~~~~ 613 (793)
T PLN00181 544 -IKSQVASSNFEGVVQVWDVARSQLVTEMKEHEK-----RVWSIDYSSADPTLLASGSDDGSVKLWSINQGV----SIGT 613 (793)
T ss_pred -CCCEEEEEeCCCeEEEEECCCCeEEEEecCCCC-----CEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCc----EEEE
Confidence 467899999999999999999888877776654 899999997 67888865 99999999998632 1122
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce-EeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME-LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
+ .. ...+.++.|++.++.+|++|+.||.|++||+++.+ ++..+.+|...|.++.|. ++.+|++++ .|++|++
T Consensus 614 ~----~~-~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s-~D~~iki 686 (793)
T PLN00181 614 I----KT-KANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSS-TDNTLKL 686 (793)
T ss_pred E----ec-CCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEE-CCCEEEE
Confidence 2 11 24588999976578899999999999999998765 577888999999999997 788999999 9999999
Q ss_pred Eeccc
Q 022019 293 WDLRK 297 (304)
Q Consensus 293 wd~~~ 297 (304)
||++.
T Consensus 687 Wd~~~ 691 (793)
T PLN00181 687 WDLSM 691 (793)
T ss_pred EeCCC
Confidence 99975
No 47
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.97 E-value=1.3e-29 Score=182.71 Aligned_cols=220 Identities=20% Similarity=0.333 Sum_probs=180.3
Q ss_pred eeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 54 RTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 54 ~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
+...+|...|.+++|+.+|..|++|+.|+++++|++........ ....+|...|-.++|.|.
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~---------------~~~~gh~~svdql~w~~~--- 75 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKE---------------LVYRGHTDSVDQLCWDPK--- 75 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhh---------------hcccCCCcchhhheeCCC---
Confidence 46678999999999999999999999999999999975422111 133456678899999876
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccc----
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDF---- 208 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~---- 208 (304)
....|++++.|.+|++||++.+++........ .=.-+.|+|+|.+++++ .|..|.+.|.++.....
T Consensus 76 ---~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~------eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~ 146 (313)
T KOG1407|consen 76 ---HPDLFATASGDKTIRIWDIRSGKCTARIETKG------ENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQF 146 (313)
T ss_pred ---CCcceEEecCCceEEEEEeccCcEEEEeeccC------cceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcc
Confidence 34489999999999999999999988776554 22468999999999976 99999999987632100
Q ss_pred -------------------------eeee----eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeE
Q 022019 209 -------------------------EKYS----TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLY 259 (304)
Q Consensus 209 -------------------------~~~~----~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~ 259 (304)
..+. .......+|.....|+.|+| .++++|+|+.|..+.+||+...-++.
T Consensus 147 ~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p-~GryfA~GsADAlvSLWD~~ELiC~R 225 (313)
T KOG1407|consen 147 KFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDP-DGRYFATGSADALVSLWDVDELICER 225 (313)
T ss_pred cceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECC-CCceEeeccccceeeccChhHhhhhe
Confidence 0000 01124467888889999999 88899999999999999999999999
Q ss_pred EeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceeee
Q 022019 260 VLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 260 ~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
.+..+.-+|..++||.||++||+++ .|-.|-|=++.+|.++.
T Consensus 226 ~isRldwpVRTlSFS~dg~~lASaS-EDh~IDIA~vetGd~~~ 267 (313)
T KOG1407|consen 226 CISRLDWPVRTLSFSHDGRMLASAS-EDHFIDIAEVETGDRVW 267 (313)
T ss_pred eeccccCceEEEEeccCcceeeccC-ccceEEeEecccCCeEE
Confidence 9999999999999999999999999 99999999999998763
No 48
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=2.8e-29 Score=207.42 Aligned_cols=215 Identities=20% Similarity=0.299 Sum_probs=173.9
Q ss_pred ceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 51 NQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
+++..+.||.+.|.+|.||.++ +|++++.|.+||||++.... +...+.|..-|+|++|+|.
T Consensus 360 kP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~------------------CL~~F~HndfVTcVaFnPv 420 (712)
T KOG0283|consen 360 KPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKE------------------CLKVFSHNDFVTCVAFNPV 420 (712)
T ss_pred cchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcc------------------eeeEEecCCeeEEEEeccc
Confidence 5677889999999999999655 99999999999999987443 3367889999999999987
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccce
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~ 209 (304)
|.++|++|+-||.|+||++...+...-...+. -|++++|.|+|+..++| .+|.+++|+.+...-...
T Consensus 421 ------DDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~------lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~ 488 (712)
T KOG0283|consen 421 ------DDRYFISGSLDGKVRLWSISDKKVVDWNDLRD------LITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSD 488 (712)
T ss_pred ------CCCcEeecccccceEEeecCcCeeEeehhhhh------hheeEEeccCCceEEEEEeccEEEEEEccCCeEEEe
Confidence 88899999999999999998877665554443 89999999999999987 999999999976322111
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccC--CeEEEEECCCCcEEEEeeccC
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEG--GVTHVQFSRDGNYLYTGGRKD 287 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~d 287 (304)
...............|+++.|.|.....+++.+.|..|+|||.+...++..|+|+.. .=....|+.||++|++++ +|
T Consensus 489 ~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~s-eD 567 (712)
T KOG0283|consen 489 FHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSAS-ED 567 (712)
T ss_pred eeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEee-cC
Confidence 111111111222237999999996666788889999999999999999999987654 346788999999999999 99
Q ss_pred CeEEEEeccc
Q 022019 288 PYILCWDLRK 297 (304)
Q Consensus 288 ~~i~vwd~~~ 297 (304)
..|++|+...
T Consensus 568 s~VYiW~~~~ 577 (712)
T KOG0283|consen 568 SWVYIWKNDS 577 (712)
T ss_pred ceEEEEeCCC
Confidence 9999999743
No 49
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=3.4e-29 Score=206.92 Aligned_cols=221 Identities=18% Similarity=0.279 Sum_probs=163.1
Q ss_pred eec-CCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCc--------------------------c-ccccc-----
Q 022019 55 TSS-IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGIS--------------------------Y-DVNAC----- 101 (304)
Q Consensus 55 ~~~-~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~--------------------------~-~~~~~----- 101 (304)
.+. +|.+.|++|.||+||+|||+||.||.|+||.+.+.+.. . .....
T Consensus 261 e~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~ 340 (712)
T KOG0283|consen 261 EISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSR 340 (712)
T ss_pred ccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccc
Confidence 444 89999999999999999999999999999998761110 0 00000
Q ss_pred -----------cccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeeccccc
Q 022019 102 -----------SLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAV 170 (304)
Q Consensus 102 -----------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 170 (304)
...........+...+|...|.++.|. .+++|++++.|.+|++|++...+++..+....
T Consensus 341 ~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWS--------Kn~fLLSSSMDKTVRLWh~~~~~CL~~F~Hnd-- 410 (712)
T KOG0283|consen 341 KGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWS--------KNNFLLSSSMDKTVRLWHPGRKECLKVFSHND-- 410 (712)
T ss_pred cccCCccccCCCccccccccchhhhhccchhheecccc--------cCCeeEeccccccEEeecCCCcceeeEEecCC--
Confidence 000000111123355677888888883 45689999999999999999999998886544
Q ss_pred ccccceEEEEECC-CCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEE
Q 022019 171 DEITAAFSVAFNP-TGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSA 248 (304)
Q Consensus 171 ~~~~~v~~i~~~~-~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~ 248 (304)
.|+|++|+| |.+++++| -||.|+||++... .+... ......|++++|.| +|+..++|+.+|.++
T Consensus 411 ----fVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~--------~Vv~W-~Dl~~lITAvcy~P-dGk~avIGt~~G~C~ 476 (712)
T KOG0283|consen 411 ----FVTCVAFNPVDDRYFISGSLDGKVRLWSISDK--------KVVDW-NDLRDLITAVCYSP-DGKGAVIGTFNGYCR 476 (712)
T ss_pred ----eeEEEEecccCCCcEeecccccceEEeecCcC--------eeEee-hhhhhhheeEEecc-CCceEEEEEeccEEE
Confidence 999999999 67888877 9999999999752 11111 22236699999999 688999999999999
Q ss_pred EEecCCceEeEEecc--c------cCCeEEEEECCCCc-EEEEeeccCCeEEEEeccccee
Q 022019 249 IYREDNMELLYVLHG--Q------EGGVTHVQFSRDGN-YLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 249 i~d~~~~~~~~~~~~--~------~~~v~~~~~~~~~~-~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
+|+....+....+.. | ...|+.+.|.|... .|++.+ .|..|+|+|.++...
T Consensus 477 fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTS-nDSrIRI~d~~~~~l 536 (712)
T KOG0283|consen 477 FYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTS-NDSRIRIYDGRDKDL 536 (712)
T ss_pred EEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEec-CCCceEEEeccchhh
Confidence 999998877665531 1 12799999987543 355555 699999999966543
No 50
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.97 E-value=7.7e-29 Score=179.32 Aligned_cols=230 Identities=17% Similarity=0.239 Sum_probs=179.3
Q ss_pred chhhcHHhhccccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccc
Q 022019 18 DTEVTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYD 97 (304)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~ 97 (304)
...+.-++..+.....|- ...+..+ -++.||.+.|+|++.+-+.++++||+.|.++++||+.+++..
T Consensus 21 eGDLlFscaKD~~~~vw~-----s~nGerl------Gty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~l-- 87 (327)
T KOG0643|consen 21 EGDLLFSCAKDSTPTVWY-----SLNGERL------GTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQL-- 87 (327)
T ss_pred CCcEEEEecCCCCceEEE-----ecCCcee------eeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEE--
Confidence 344455556666555553 1233333 378999999999999999999999999999999999988654
Q ss_pred cccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeC-----CCCEEEEEcCC-------CeeeEEee
Q 022019 98 VNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTR-----DHPIHLWDATT-------GLLRCTYR 165 (304)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~-------~~~~~~~~ 165 (304)
.....+.+|..+.| +++|++++.+.+ .+.|.++|++. .++...+.
T Consensus 88 ----------------a~~k~~~~Vk~~~F-------~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~ 144 (327)
T KOG0643|consen 88 ----------------ATWKTNSPVKRVDF-------SFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIP 144 (327)
T ss_pred ----------------EEeecCCeeEEEee-------ccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEec
Confidence 33444567777776 778888777754 46799999983 34455555
Q ss_pred cccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC
Q 022019 166 AYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS 244 (304)
Q Consensus 166 ~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d 244 (304)
.+.. .++.+-|.|-+++|++| .||.|.+||++++ ..+......|...|+.++++| +..++++++.|
T Consensus 145 t~~s-----kit~a~Wg~l~~~ii~Ghe~G~is~~da~~g-------~~~v~s~~~h~~~Ind~q~s~-d~T~FiT~s~D 211 (327)
T KOG0643|consen 145 TPDS-----KITSALWGPLGETIIAGHEDGSISIYDARTG-------KELVDSDEEHSSKINDLQFSR-DRTYFITGSKD 211 (327)
T ss_pred CCcc-----ceeeeeecccCCEEEEecCCCcEEEEEcccC-------ceeeechhhhccccccccccC-CcceEEecccC
Confidence 5443 88999999999999988 9999999999975 333444466788899999999 78899999999
Q ss_pred CeEEEEecCCceEeEE-------------------------------------------------------eccccCCeE
Q 022019 245 QTSAIYREDNMELLYV-------------------------------------------------------LHGQEGGVT 269 (304)
Q Consensus 245 g~i~i~d~~~~~~~~~-------------------------------------------------------~~~~~~~v~ 269 (304)
.+-++||.++.+.+++ +++|-++|+
T Consensus 212 ttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPIN 291 (327)
T KOG0643|consen 212 TTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPIN 291 (327)
T ss_pred ccceeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcc
Confidence 9999999876543332 457889999
Q ss_pred EEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 270 HVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 270 ~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
+++|+|+|+..++|+ .||.|++.-+..
T Consensus 292 svAfhPdGksYsSGG-EDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 292 SVAFHPDGKSYSSGG-EDGYVRLHHFDS 318 (327)
T ss_pred eeEECCCCcccccCC-CCceEEEEEecc
Confidence 999999999999999 999999986643
No 51
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=2.2e-29 Score=201.77 Aligned_cols=210 Identities=18% Similarity=0.285 Sum_probs=181.4
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+..|...|.++.|+|...+++++-..|.|.|||.++......+..+. .+|....|.
T Consensus 8 k~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~-----------------~PvRa~kfi------ 64 (794)
T KOG0276|consen 8 KFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSE-----------------VPVRAAKFI------ 64 (794)
T ss_pred HhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecc-----------------cchhhheee------
Confidence 344589999999999999999999999999999998776544433322 455555552
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
+--+++++|++|+.|++|+..+++.+..+..|.. -|.+++.+|...+++++ .|-.|++||.+.. ..
T Consensus 65 -aRknWiv~GsDD~~IrVfnynt~ekV~~FeAH~D-----yIR~iavHPt~P~vLtsSDDm~iKlW~we~~-------wa 131 (794)
T KOG0276|consen 65 -ARKNWIVTGSDDMQIRVFNYNTGEKVKTFEAHSD-----YIRSIAVHPTLPYVLTSSDDMTIKLWDWENE-------WA 131 (794)
T ss_pred -eccceEEEecCCceEEEEecccceeeEEeecccc-----ceeeeeecCCCCeEEecCCccEEEEeeccCc-------ee
Confidence 3455899999999999999999999999998886 89999999999999966 8899999999763 44
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCC--CcEEEEeeccCCeEE
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRD--GNYLYTGGRKDPYIL 291 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~d~~i~ 291 (304)
....+.+|...|.+++|+|.+...+++++-|++|++|.+.+..+.+++.+|...|+++.+-+- .++|++|+ +|.+|+
T Consensus 132 ~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsga-DD~tiK 210 (794)
T KOG0276|consen 132 CEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGA-DDLTIK 210 (794)
T ss_pred eeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecC-CCceEE
Confidence 455568999999999999999999999999999999999999999999999999999999764 47999999 999999
Q ss_pred EEecccceee
Q 022019 292 CWDLRKAVQV 301 (304)
Q Consensus 292 vwd~~~~~~~ 301 (304)
|||..+..|+
T Consensus 211 vWDyQtk~CV 220 (794)
T KOG0276|consen 211 VWDYQTKSCV 220 (794)
T ss_pred EeecchHHHH
Confidence 9999998775
No 52
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.97 E-value=3.2e-28 Score=191.33 Aligned_cols=224 Identities=20% Similarity=0.379 Sum_probs=173.6
Q ss_pred eeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 54 RTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 54 ~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
..+..|...|.|++|+|||.+|+|++.||.+.+||=.+++....+.. ...|...|+.+.|
T Consensus 184 ~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~--------------~~aHkGsIfalsW------ 243 (603)
T KOG0318|consen 184 SSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELED--------------SDAHKGSIFALSW------ 243 (603)
T ss_pred ecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecC--------------CCCccccEEEEEE------
Confidence 36788999999999999999999999999999999888766544332 2356789999999
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccc--------------------------------------cccccc
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDA--------------------------------------VDEITA 175 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--------------------------------------~~~~~~ 175 (304)
+||+..+++++.|.+++|||+.+.+++.++..... .+|...
T Consensus 244 -sPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ 322 (603)
T KOG0318|consen 244 -SPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKS 322 (603)
T ss_pred -CCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccc
Confidence 88999999999999999999998777666543221 145668
Q ss_pred eEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccce-------eeeee---------------------------------
Q 022019 176 AFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFE-------KYSTL--------------------------------- 214 (304)
Q Consensus 176 v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~-------~~~~~--------------------------------- 214 (304)
|+++..+|++++|++| .||.|.-||...+..... .+..+
T Consensus 323 ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~ 402 (603)
T KOG0318|consen 323 ITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVV 402 (603)
T ss_pred eeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCccccccee
Confidence 9999999999999976 999999999865321000 00000
Q ss_pred -----------------------------e------------------------------------------------cc
Q 022019 215 -----------------------------K------------------------------------------------GN 217 (304)
Q Consensus 215 -----------------------------~------------------------------------------------~~ 217 (304)
. ..
T Consensus 403 ~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~ 482 (603)
T KOG0318|consen 403 KLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAK 482 (603)
T ss_pred ecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceee
Confidence 0 02
Q ss_pred ccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeE-EeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 218 KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLY-VLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 218 ~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
...|.++|++++|+| ++.+|++|...+.+.+||..+.+... .+--|...|.+++|+|+..++|+|+ -|-+|.||+++
T Consensus 483 ~~~h~a~iT~vaySp-d~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGS-lDt~Viiysv~ 560 (603)
T KOG0318|consen 483 LLEHRAAITDVAYSP-DGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGS-LDTNVIIYSVK 560 (603)
T ss_pred eecccCCceEEEECC-CCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEecc-ccceEEEEEcc
Confidence 234566788888888 67788888888888888887766532 2334899999999999999999999 99999999998
Q ss_pred ccee
Q 022019 297 KAVQ 300 (304)
Q Consensus 297 ~~~~ 300 (304)
....
T Consensus 561 kP~~ 564 (603)
T KOG0318|consen 561 KPAK 564 (603)
T ss_pred Chhh
Confidence 7543
No 53
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=3.1e-29 Score=200.85 Aligned_cols=221 Identities=16% Similarity=0.271 Sum_probs=182.1
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
.+.+|+-.++.... .+.-..-+|.+.+|-+.-+++++|+.|..|+||+..+.+....
T Consensus 36 ~V~IWnyetqtmVk------sfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~----------------- 92 (794)
T KOG0276|consen 36 DVQIWNYETQTMVK------SFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKT----------------- 92 (794)
T ss_pred eeEEEecccceeee------eeeecccchhhheeeeccceEEEecCCceEEEEecccceeeEE-----------------
Confidence 45566666665544 5556677899999999999999999999999999987765433
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCC-eeeEEeecccccccccceEEEEECC-CCcEEEE-E
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTG-LLRCTYRAYDAVDEITAAFSVAFNP-TGTKIFA-G 191 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~-~ 191 (304)
...|...+.+++.+| ...+++++++|..|++||.+.+ .+.+++++|.+ -|++++|+| |.+.+++ +
T Consensus 93 FeAH~DyIR~iavHP-------t~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~H-----yVMqv~fnPkD~ntFaS~s 160 (794)
T KOG0276|consen 93 FEAHSDYIRSIAVHP-------TLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEH-----YVMQVAFNPKDPNTFASAS 160 (794)
T ss_pred eeccccceeeeeecC-------CCCeEEecCCccEEEEeeccCceeeeeEEcCcce-----EEEEEEecCCCccceeeee
Confidence 334557888887755 5558999999999999999865 46677887776 999999999 4567774 5
Q ss_pred cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecC-CCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEE
Q 022019 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPT-HTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTH 270 (304)
Q Consensus 192 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~ 270 (304)
-|++|+||.+..+ .....+.+|...|.+++|-|- +..+|++|+.|..|+|||.++..++.++.||...|..
T Consensus 161 LDrTVKVWslgs~--------~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~ 232 (794)
T KOG0276|consen 161 LDRTVKVWSLGSP--------HPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSF 232 (794)
T ss_pred ccccEEEEEcCCC--------CCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceE
Confidence 9999999999763 222233789999999999872 2359999999999999999999999999999999999
Q ss_pred EEECCCCcEEEEeeccCCeEEEEecccce
Q 022019 271 VQFSRDGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 271 ~~~~~~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
+.|+|.-+.+++|+ .||++++|+-.+-+
T Consensus 233 v~fhp~lpiiisgs-EDGTvriWhs~Ty~ 260 (794)
T KOG0276|consen 233 VFFHPELPIIISGS-EDGTVRIWNSKTYK 260 (794)
T ss_pred EEecCCCcEEEEec-CCccEEEecCccee
Confidence 99999999999999 99999999987754
No 54
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.97 E-value=7.8e-28 Score=174.40 Aligned_cols=235 Identities=18% Similarity=0.335 Sum_probs=174.8
Q ss_pred hcHHhhccccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcccccc
Q 022019 21 VTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNA 100 (304)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 100 (304)
..++++.++..+.|. ......... +. ..-.+|+..|.+++|+|.|++|++|+.|.++.||.-..++.
T Consensus 29 ilAscg~Dk~vriw~-----~~~~~s~~c-k~-vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~ef------ 95 (312)
T KOG0645|consen 29 ILASCGTDKAVRIWS-----TSSGDSWTC-KT-VLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEF------ 95 (312)
T ss_pred EEEeecCCceEEEEe-----cCCCCcEEE-EE-eccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCce------
Confidence 445556666555553 332222211 11 12358999999999999999999999999999997653322
Q ss_pred ccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCC---eeeEEeecccccccccceE
Q 022019 101 CSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTG---LLRCTYRAYDAVDEITAAF 177 (304)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~~~~~~v~ 177 (304)
.......+|...|.+++| +++|++||++++|++|-||.+..+ ++...++.|.. .|.
T Consensus 96 ---------ecv~~lEGHEnEVK~Vaw-------s~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~Htq-----DVK 154 (312)
T KOG0645|consen 96 ---------ECVATLEGHENEVKCVAW-------SASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQ-----DVK 154 (312)
T ss_pred ---------eEEeeeeccccceeEEEE-------cCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccc-----ccc
Confidence 223356678899999998 889999999999999999998754 34555665554 899
Q ss_pred EEEECCCCcEEEE-EcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc-
Q 022019 178 SVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM- 255 (304)
Q Consensus 178 ~i~~~~~~~~l~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~- 255 (304)
.+.|+|...+|++ +.|++|++|+-.. ........+ +.+|...|.+++|+| .+..|++++.|++++||.....
T Consensus 155 ~V~WHPt~dlL~S~SYDnTIk~~~~~~-dddW~c~~t----l~g~~~TVW~~~F~~-~G~rl~s~sdD~tv~Iw~~~~~~ 228 (312)
T KOG0645|consen 155 HVIWHPTEDLLFSCSYDNTIKVYRDED-DDDWECVQT----LDGHENTVWSLAFDN-IGSRLVSCSDDGTVSIWRLYTDL 228 (312)
T ss_pred EEEEcCCcceeEEeccCCeEEEEeecC-CCCeeEEEE----ecCccceEEEEEecC-CCceEEEecCCcceEeeeeccCc
Confidence 9999999999995 5999999998764 333333333 377888999999999 7789999999999999973211
Q ss_pred ------e------------------EeEE------------------eccccCCeEEEEECCC-CcEEEEeeccCCeEEE
Q 022019 256 ------E------------------LLYV------------------LHGQEGGVTHVQFSRD-GNYLYTGGRKDPYILC 292 (304)
Q Consensus 256 ------~------------------~~~~------------------~~~~~~~v~~~~~~~~-~~~l~~~~~~d~~i~v 292 (304)
+ .+.. -..|...|+++.|+|. ...|++++ +||.|++
T Consensus 229 ~~~~sr~~Y~v~W~~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~-DDG~v~~ 307 (312)
T KOG0645|consen 229 SGMHSRALYDVPWDNGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGG-DDGIVNF 307 (312)
T ss_pred chhcccceEeeeecccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecC-CCceEEE
Confidence 0 0000 1246778999999995 67899999 9999999
Q ss_pred Eecc
Q 022019 293 WDLR 296 (304)
Q Consensus 293 wd~~ 296 (304)
|.+.
T Consensus 308 W~l~ 311 (312)
T KOG0645|consen 308 WELE 311 (312)
T ss_pred EEec
Confidence 9874
No 55
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.97 E-value=5.6e-29 Score=187.01 Aligned_cols=218 Identities=20% Similarity=0.298 Sum_probs=180.6
Q ss_pred eeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEE
Q 022019 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV 115 (304)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (304)
+-+||+..++... ++.||-..|..+++|+...||++++.|+.|+.||+..++.....
T Consensus 175 ikIwDlatg~Lkl------tltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~Y----------------- 231 (460)
T KOG0285|consen 175 IKIWDLATGQLKL------TLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHY----------------- 231 (460)
T ss_pred eEEEEcccCeEEE------eecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHh-----------------
Confidence 3456666665443 78999999999999999999999999999999999876554332
Q ss_pred eecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcCC
Q 022019 116 VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNK 194 (304)
Q Consensus 116 ~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~ 194 (304)
.+|-..|+++..+| .-..|++|+.|.++++||+++...+..+.+|.. +|.++.+.|.+..+++ +.|+
T Consensus 232 hGHlS~V~~L~lhP-------Tldvl~t~grDst~RvWDiRtr~~V~~l~GH~~-----~V~~V~~~~~dpqvit~S~D~ 299 (460)
T KOG0285|consen 232 HGHLSGVYCLDLHP-------TLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTN-----PVASVMCQPTDPQVITGSHDS 299 (460)
T ss_pred ccccceeEEEeccc-------cceeEEecCCcceEEEeeecccceEEEecCCCC-----cceeEEeecCCCceEEecCCc
Confidence 33447889988754 556899999999999999999999999988776 9999999997767775 5999
Q ss_pred eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEEC
Q 022019 195 SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFS 274 (304)
Q Consensus 195 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 274 (304)
+|++||++.+. ... ....|...+.+++.+| ....+++++.| .|+-|++..+..+..+.+|..-|.+++.+
T Consensus 300 tvrlWDl~agk----t~~----tlt~hkksvral~lhP-~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~n 369 (460)
T KOG0285|consen 300 TVRLWDLRAGK----TMI----TLTHHKKSVRALCLHP-KENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVN 369 (460)
T ss_pred eEEEeeeccCc----eeE----eeecccceeeEEecCC-chhhhhccCCc-cceeccCCccchhhccccccceeeeeeec
Confidence 99999998742 112 2256778899999999 77788888876 59999999999999999999999999999
Q ss_pred CCCcEEEEeeccCCeEEEEeccccee
Q 022019 275 RDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 275 ~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
.|| ++++|+ ++|.|.+||.++|-.
T Consensus 370 sD~-v~~~G~-dng~~~fwdwksg~n 393 (460)
T KOG0285|consen 370 SDG-VLVSGG-DNGSIMFWDWKSGHN 393 (460)
T ss_pred cCc-eEEEcC-CceEEEEEecCcCcc
Confidence 877 677888 999999999998743
No 56
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.97 E-value=9.8e-29 Score=190.81 Aligned_cols=219 Identities=17% Similarity=0.322 Sum_probs=171.4
Q ss_pred ceeeeecCCCCceeEEEEcCC-CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecC
Q 022019 51 NQFRTSSIPNNFLKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP 129 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~~-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 129 (304)
+.-..+.+|.+.=.+++|++. .-.|++++.|++|++||+....... ...........|...|.+++|+|
T Consensus 168 ~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~----------~~~~p~~~~~~h~~~VeDV~~h~ 237 (422)
T KOG0264|consen 168 RPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKED----------KVVDPKTIFSGHEDVVEDVAWHP 237 (422)
T ss_pred CCceEEEeecccccccccccccceeEeeccCCCcEEEEeccccccCC----------ccccceEEeecCCcceehhhccc
Confidence 334478899998899999994 4489999999999999998554321 11223346677889999999988
Q ss_pred ccceeCCCccEEEEEeCCCCEEEEEcCC--CeeeEEeecccccccccceEEEEECCCCcE-EEEE-cCCeEEEEEcCCCC
Q 022019 130 HMSASDPTSCVFASTTRDHPIHLWDATT--GLLRCTYRAYDAVDEITAAFSVAFNPTGTK-IFAG-YNKSVRVFDVHRPG 205 (304)
Q Consensus 130 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~--~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-l~~~-~d~~i~v~d~~~~~ 205 (304)
. ...+|++++.|+.+.|||+++ .++......| ...|.|++|+|-+.+ ||+| .|++|.+||+|...
T Consensus 238 ~------h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah-----~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~ 306 (422)
T KOG0264|consen 238 L------HEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAH-----SAEVNCVAFNPFNEFILATGSADKTVALWDLRNLN 306 (422)
T ss_pred c------chhhheeecCCCeEEEEEcCCCCCCCccccccc-----CCceeEEEeCCCCCceEEeccCCCcEEEeechhcc
Confidence 6 445899999999999999995 3333344444 349999999996554 5555 89999999999753
Q ss_pred ccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc--------------eEeEEeccccCCeEEE
Q 022019 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM--------------ELLYVLHGQEGGVTHV 271 (304)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~--------------~~~~~~~~~~~~v~~~ 271 (304)
. ....+.+|...|..+.|+|....+|++++.|+.+.+||+..- ++++.--||...|..+
T Consensus 307 ~-------~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~Df 379 (422)
T KOG0264|consen 307 K-------PLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDF 379 (422)
T ss_pred c-------CceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccc
Confidence 3 333448899999999999988899999999999999998632 2345566899999999
Q ss_pred EECCCCcEEEEeeccCCeEEEEeccc
Q 022019 272 QFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 272 ~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
.|+|+..++++....|+.+.||++..
T Consensus 380 sWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 380 SWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred cCCCCCCeEEEEecCCceEEEeeccc
Confidence 99999987554443999999999863
No 57
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.97 E-value=1.6e-27 Score=188.52 Aligned_cols=222 Identities=28% Similarity=0.425 Sum_probs=176.4
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
.+..|+...... ...+..|...+..+.|+|++++|++++.||.|++|++.++.... .
T Consensus 32 ~i~i~~~~~~~~------~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~-----------------~ 88 (289)
T cd00200 32 TIKVWDLETGEL------LRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVR-----------------T 88 (289)
T ss_pred EEEEEEeeCCCc------EEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceE-----------------E
Confidence 344555554432 23567899999999999999999999999999999998542211 2
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d 193 (304)
...+...+.++.| ++++.++++++.||.|++||+.+++....+..+.. .+.++.|+|++.+++++ .+
T Consensus 89 ~~~~~~~i~~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~~~~~~ 156 (289)
T cd00200 89 LTGHTSYVSSVAF-------SPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTD-----WVNSVAFSPDGTFVASSSQD 156 (289)
T ss_pred EeccCCcEEEEEE-------cCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCC-----cEEEEEEcCcCCEEEEEcCC
Confidence 2234457888888 55677888888899999999998887777764443 79999999999999887 59
Q ss_pred CeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEE
Q 022019 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQF 273 (304)
Q Consensus 194 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 273 (304)
+.|++||++... .. .. ...+...+.++.|+| ++..+++++.++.|++||++.++++..+..|...+.++.|
T Consensus 157 ~~i~i~d~~~~~-~~---~~----~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 227 (289)
T cd00200 157 GTIKLWDLRTGK-CV---AT----LTGHTGEVNSVAFSP-DGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAF 227 (289)
T ss_pred CcEEEEEccccc-cc---ee----EecCccccceEEECC-CcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEE
Confidence 999999997531 11 11 135666899999999 6667888888999999999999999999889999999999
Q ss_pred CCCCcEEEEeeccCCeEEEEecccceee
Q 022019 274 SRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 274 ~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+|++.++++++ .||.|++|++.+++.+
T Consensus 228 ~~~~~~~~~~~-~~~~i~i~~~~~~~~~ 254 (289)
T cd00200 228 SPDGYLLASGS-EDGTIRVWDLRTGECV 254 (289)
T ss_pred cCCCcEEEEEc-CCCcEEEEEcCCceeE
Confidence 99988888887 8999999999876543
No 58
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=8.8e-29 Score=176.00 Aligned_cols=231 Identities=17% Similarity=0.255 Sum_probs=185.3
Q ss_pred CchhhcHHhhccccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcc
Q 022019 17 SDTEVTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISY 96 (304)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~ 96 (304)
...+++.+++.++..++|++ ... ..+++..+|...|..++.+.|...|++|+.|+.+.+||+.+++...
T Consensus 27 ~dGnY~ltcGsdrtvrLWNp-----~rg------~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~R 95 (307)
T KOG0316|consen 27 VDGNYCLTCGSDRTVRLWNP-----LRG------ALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDR 95 (307)
T ss_pred cCCCEEEEcCCCceEEeecc-----ccc------ceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeee
Confidence 45677888888888888852 222 2345888999999999999999999999999999999999876543
Q ss_pred ccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCC--eeeEEeeccccccccc
Q 022019 97 DVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTG--LLRCTYRAYDAVDEIT 174 (304)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~~~~ 174 (304)
. ...|...|..+.| +.+...+++|+.|.++++||.++. ++++.+.....
T Consensus 96 r-----------------~rgH~aqVNtV~f-------NeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D----- 146 (307)
T KOG0316|consen 96 R-----------------FRGHLAQVNTVRF-------NEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKD----- 146 (307)
T ss_pred e-----------------cccccceeeEEEe-------cCcceEEEeccccceeEEEEcccCCCCccchhhhhcC-----
Confidence 3 3345688888888 667789999999999999999865 45555554443
Q ss_pred ceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC
Q 022019 175 AAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~ 253 (304)
.|.++..+ +..|++| .||+++.||++.+. +.. .-...+|++++|+| +++..++++.|+++++.|-.
T Consensus 147 ~V~Si~v~--~heIvaGS~DGtvRtydiR~G~--------l~s--Dy~g~pit~vs~s~-d~nc~La~~l~stlrLlDk~ 213 (307)
T KOG0316|consen 147 GVSSIDVA--EHEIVAGSVDGTVRTYDIRKGT--------LSS--DYFGHPITSVSFSK-DGNCSLASSLDSTLRLLDKE 213 (307)
T ss_pred ceeEEEec--ccEEEeeccCCcEEEEEeecce--------eeh--hhcCCcceeEEecC-CCCEEEEeeccceeeecccc
Confidence 78888876 4456655 99999999999742 111 23345799999999 77788899999999999999
Q ss_pred CceEeEEeccccCC--eEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 254 NMELLYVLHGQEGG--VTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 254 ~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+++.+..+++|... =..++++.....+++|+ .||.+++||+.++..+
T Consensus 214 tGklL~sYkGhkn~eykldc~l~qsdthV~sgS-EDG~Vy~wdLvd~~~~ 262 (307)
T KOG0316|consen 214 TGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGS-EDGKVYFWDLVDETQI 262 (307)
T ss_pred hhHHHHHhcccccceeeeeeeecccceeEEecc-CCceEEEEEeccceee
Confidence 99999999999874 34567788888999999 9999999999887665
No 59
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.97 E-value=5.8e-28 Score=174.81 Aligned_cols=214 Identities=21% Similarity=0.239 Sum_probs=176.6
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+.||..+++.|+++.+|.+|.+|+.|.+..||-..+++... ...+|...|+++..
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlG-----------------ty~GHtGavW~~Di------- 60 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLG-----------------TYDGHTGAVWCCDI------- 60 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceee-----------------eecCCCceEEEEEe-------
Confidence 567999999999999999999999999999999765554322 45567789988865
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEc------CCeEEEEEcCCCCccc
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGY------NKSVRVFDVHRPGRDF 208 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~------d~~i~v~d~~~~~~~~ 208 (304)
+.+.+.+++|+.|.++++||+.+|+.+..++... +|..+.|+++|++++.+. .+.|.++|++......
T Consensus 61 d~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~------~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~ 134 (327)
T KOG0643|consen 61 DWDSKHLITGSADQTAKLWDVETGKQLATWKTNS------PVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDI 134 (327)
T ss_pred cCCcceeeeccccceeEEEEcCCCcEEEEeecCC------eeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhh
Confidence 6688899999999999999999999999988766 899999999999988543 3679999998643221
Q ss_pred eeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc-eEeEEeccccCCeEEEEECCCCcEEEEeeccC
Q 022019 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM-ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKD 287 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d 287 (304)
....+ ......+...++.+-|.| -+..|++|.+||.|.+||++++ +.+.....|...|+.+.++||..++++++ .|
T Consensus 135 ~s~ep-~~kI~t~~skit~a~Wg~-l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s-~D 211 (327)
T KOG0643|consen 135 DSEEP-YLKIPTPDSKITSALWGP-LGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGS-KD 211 (327)
T ss_pred cccCc-eEEecCCccceeeeeecc-cCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecc-cC
Confidence 11111 111134457799999999 7889999999999999999997 46666678999999999999999999999 99
Q ss_pred CeEEEEecccceee
Q 022019 288 PYILCWDLRKAVQV 301 (304)
Q Consensus 288 ~~i~vwd~~~~~~~ 301 (304)
.+-++||+++.+.+
T Consensus 212 ttakl~D~~tl~v~ 225 (327)
T KOG0643|consen 212 TTAKLVDVRTLEVL 225 (327)
T ss_pred ccceeeeccceeeE
Confidence 99999999987554
No 60
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1.8e-28 Score=197.29 Aligned_cols=218 Identities=22% Similarity=0.376 Sum_probs=171.5
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
.++.|+........ ....+.+.|+++.|+++|.+|++|..+|.|.|||..+.+.... +
T Consensus 198 ~vylW~~~s~~v~~------l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~----------------~ 255 (484)
T KOG0305|consen 198 SVYLWSASSGSVTE------LCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRT----------------L 255 (484)
T ss_pred eEEEEecCCCceEE------eEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhcccccc----------------c
Confidence 35566655554332 2233488999999999999999999999999999886544322 2
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEE-eecccccccccceEEEEECCCCcEEEEE-c
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCT-YRAYDAVDEITAAFSVAFNPTGTKIFAG-Y 192 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~ 192 (304)
...|...|-+++| ++..+.+|+.|+.|..+|++..+.... +..| ...|..+.|++|+.++|+| .
T Consensus 256 ~~~h~~rvg~laW---------~~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H-----~qeVCgLkws~d~~~lASGgn 321 (484)
T KOG0305|consen 256 RGSHASRVGSLAW---------NSSVLSSGSRDGKILNHDVRISQHVVSTLQGH-----RQEVCGLKWSPDGNQLASGGN 321 (484)
T ss_pred cCCcCceeEEEec---------cCceEEEecCCCcEEEEEEecchhhhhhhhcc-----cceeeeeEECCCCCeeccCCC
Confidence 2226688999999 466899999999999999998765544 4434 3499999999999999966 9
Q ss_pred CCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEe--cCCeEEEEecCCce--------------
Q 022019 193 NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS--YSQTSAIYREDNME-------------- 256 (304)
Q Consensus 193 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~--~dg~i~i~d~~~~~-------------- 256 (304)
|+.+.|||.... ........|.+.|.+++|+|-...+||+|+ .|+.|++||..+++
T Consensus 322 DN~~~Iwd~~~~--------~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL 393 (484)
T KOG0305|consen 322 DNVVFIWDGLSP--------EPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSL 393 (484)
T ss_pred ccceEeccCCCc--------cccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceeeE
Confidence 999999999552 222223678899999999998788999865 58999999876552
Q ss_pred -----------------------------EeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 257 -----------------------------LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 257 -----------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
++..+.+|...|..++++|||..+++|+ .|.++++|++-.
T Consensus 394 ~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a-~DETlrfw~~f~ 462 (484)
T KOG0305|consen 394 IWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGA-ADETLRFWNLFD 462 (484)
T ss_pred EEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEec-ccCcEEeccccC
Confidence 2334568999999999999999999999 999999999865
No 61
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=2.5e-28 Score=199.41 Aligned_cols=213 Identities=16% Similarity=0.235 Sum_probs=177.4
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccc----eEEEeecCCeEEEEeecCc
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYE----ASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~ 130 (304)
...+|.+.|+.++.+||+..++|||.|.+|++||..-.... ++..... ..-.+.-...|.++.+
T Consensus 449 ti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~---------~gt~~k~lsl~~~rtLel~ddvL~v~~--- 516 (888)
T KOG0306|consen 449 TIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSV---------PGTQKKVLSLKHTRTLELEDDVLCVSV--- 516 (888)
T ss_pred hhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEecc---------CcccceeeeeccceEEeccccEEEEEE---
Confidence 56789999999999999999999999999999997521100 0000000 0012223356666655
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccce
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~ 209 (304)
||||++|+++--|.++++|-+.+-+....+-+|.- +|.||..+||++.+++| .|.+|++|-+.-
T Consensus 517 ----Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkL-----PV~smDIS~DSklivTgSADKnVKiWGLdF------ 581 (888)
T KOG0306|consen 517 ----SPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKL-----PVLSMDISPDSKLIVTGSADKNVKIWGLDF------ 581 (888)
T ss_pred ----cCCCcEEEEEeccCeEEEEEecceeeeeeeccccc-----ceeEEeccCCcCeEEeccCCCceEEecccc------
Confidence 89999999999999999999999887777776665 99999999999999966 999999999876
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCe
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPY 289 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~ 289 (304)
......+.+|...|.++.|.| ...++++++.|+.|+-||-...+.+..+.+|...|++++.+|+|.++++++ .|.+
T Consensus 582 --GDCHKS~fAHdDSvm~V~F~P-~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~s-hD~s 657 (888)
T KOG0306|consen 582 --GDCHKSFFAHDDSVMSVQFLP-KTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSS-HDKS 657 (888)
T ss_pred --chhhhhhhcccCceeEEEEcc-cceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEecc-CCce
Confidence 334444578999999999999 888999999999999999999999999999999999999999999999999 9999
Q ss_pred EEEEecccc
Q 022019 290 ILCWDLRKA 298 (304)
Q Consensus 290 i~vwd~~~~ 298 (304)
|++|.....
T Consensus 658 IRlwE~tde 666 (888)
T KOG0306|consen 658 IRLWERTDE 666 (888)
T ss_pred eEeeeccCc
Confidence 999987654
No 62
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=1.9e-27 Score=211.87 Aligned_cols=220 Identities=13% Similarity=0.176 Sum_probs=164.1
Q ss_pred eeeecCCCcccccccceeeeecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
+..|++.... .+..+.+|.+.|++++|+| ++.+|++|+.||+|++||+.++....
T Consensus 557 v~lWd~~~~~------~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~------------------ 612 (793)
T PLN00181 557 VQVWDVARSQ------LVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIG------------------ 612 (793)
T ss_pred EEEEECCCCe------EEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEE------------------
Confidence 3456655433 2346789999999999997 78999999999999999997543211
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCe-eeEEeecccccccccceEEEEECCCCcEEE-EEc
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGL-LRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGY 192 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~ 192 (304)
.......+.++.|. ++++.+|++|+.||.|++||+++.. ....+..|. ..|.++.|. ++.+++ ++.
T Consensus 613 ~~~~~~~v~~v~~~------~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~-----~~V~~v~f~-~~~~lvs~s~ 680 (793)
T PLN00181 613 TIKTKANICCVQFP------SESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHS-----KTVSYVRFV-DSSTLVSSST 680 (793)
T ss_pred EEecCCCeEEEEEe------CCCCCEEEEEeCCCeEEEEECCCCCccceEecCCC-----CCEEEEEEe-CCCEEEEEEC
Confidence 11223467777763 3478899999999999999998765 344454444 389999997 566676 459
Q ss_pred CCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEe-----------
Q 022019 193 NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVL----------- 261 (304)
Q Consensus 193 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~----------- 261 (304)
|+.|++||++....... ........+|...+..++|+| .+.+|++|+.|+.|++|+.....++..+
T Consensus 681 D~~ikiWd~~~~~~~~~--~~~l~~~~gh~~~i~~v~~s~-~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~ 757 (793)
T PLN00181 681 DNTLKLWDLSMSISGIN--ETPLHSFMGHTNVKNFVGLSV-SDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGL 757 (793)
T ss_pred CCEEEEEeCCCCccccC--CcceEEEcCCCCCeeEEEEcC-CCCEEEEEeCCCEEEEEECCCCCceEEEecccCCccccc
Confidence 99999999975321100 111122367888899999999 6779999999999999998765444322
Q ss_pred --ccccCCeEEEEECCCCcEEEEeeccCCeEEEEec
Q 022019 262 --HGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 262 --~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
..|...|.+++|+|++.+|++|+ .||.|++|++
T Consensus 758 ~~~~~~~~V~~v~ws~~~~~lva~~-~dG~I~i~~~ 792 (793)
T PLN00181 758 EVDDASQFISSVCWRGQSSTLVAAN-STGNIKILEM 792 (793)
T ss_pred ccCCCCcEEEEEEEcCCCCeEEEec-CCCcEEEEec
Confidence 23445699999999999999999 9999999996
No 63
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.96 E-value=1.6e-29 Score=189.47 Aligned_cols=197 Identities=18% Similarity=0.323 Sum_probs=167.5
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
..+.|.|+.+ |...+++|..|++|+|||..+..... ...+|.+.|.++.| +.
T Consensus 196 ~skgVYClQY--DD~kiVSGlrDnTikiWD~n~~~c~~-----------------~L~GHtGSVLCLqy---------d~ 247 (499)
T KOG0281|consen 196 NSKGVYCLQY--DDEKIVSGLRDNTIKIWDKNSLECLK-----------------ILTGHTGSVLCLQY---------DE 247 (499)
T ss_pred cCCceEEEEe--cchhhhcccccCceEEeccccHHHHH-----------------hhhcCCCcEEeeec---------cc
Confidence 4567999998 45689999999999999987544322 45667799999988 77
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCCccceeeeeeecc
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGN 217 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 217 (304)
+.+++|+.|.+|++||+.+++++.++-.|-. .|..+.|+. .+++ ++.|.++.+||+..+.. ..+...
T Consensus 248 rviisGSSDsTvrvWDv~tge~l~tlihHce-----aVLhlrf~n--g~mvtcSkDrsiaVWdm~sps~-----it~rrV 315 (499)
T KOG0281|consen 248 RVIVSGSSDSTVRVWDVNTGEPLNTLIHHCE-----AVLHLRFSN--GYMVTCSKDRSIAVWDMASPTD-----ITLRRV 315 (499)
T ss_pred eEEEecCCCceEEEEeccCCchhhHHhhhcc-----eeEEEEEeC--CEEEEecCCceeEEEeccCchH-----HHHHHH
Confidence 7999999999999999999999988876654 899999973 4555 66999999999987531 344455
Q ss_pred ccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 218 KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 218 ~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
..+|...|..+.|+. +++++++.|.+|++|++.+++.+.++.+|..+|.|+.+ .|+++++|+ .|.+|++||+..
T Consensus 316 LvGHrAaVNvVdfd~---kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQY--r~rlvVSGS-SDntIRlwdi~~ 389 (499)
T KOG0281|consen 316 LVGHRAAVNVVDFDD---KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGS-SDNTIRLWDIEC 389 (499)
T ss_pred Hhhhhhheeeecccc---ceEEEecCCceEEEEeccceeeehhhhcccccceehhc--cCeEEEecC-CCceEEEEeccc
Confidence 688999999999975 39999999999999999999999999999999999998 589999999 999999999999
Q ss_pred ceee
Q 022019 298 AVQV 301 (304)
Q Consensus 298 ~~~~ 301 (304)
|.++
T Consensus 390 G~cL 393 (499)
T KOG0281|consen 390 GACL 393 (499)
T ss_pred cHHH
Confidence 9765
No 64
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=5.8e-28 Score=179.10 Aligned_cols=246 Identities=19% Similarity=0.233 Sum_probs=161.9
Q ss_pred eeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcc--------cc---cccccc
Q 022019 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISY--------DV---NACSLA 104 (304)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~--------~~---~~~~~~ 104 (304)
...|+.......++ -.+..+++|.+.|++++|+.||++|+|++.|++|+||++++..... +. ....+.
T Consensus 63 ~~~~k~~q~~f~Hp-l~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~Fa 141 (420)
T KOG2096|consen 63 NDQWKAKQPTFVHP-LNVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFA 141 (420)
T ss_pred hhhhcccCCCcccc-hhhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEEC
Confidence 33444444333333 3445889999999999999999999999999999999998643210 00 000011
Q ss_pred ccCCccceEEEeecCCeE---------------EEEeecC-----------ccceeCCCccEEEEEeCCCCEEEEEcCCC
Q 022019 105 KDQDSYEASLVVTEGESV---------------YDFCWFP-----------HMSASDPTSCVFASTTRDHPIHLWDATTG 158 (304)
Q Consensus 105 ~~~~~~~~~~~~~~~~~v---------------~~~~~~~-----------~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 158 (304)
++-... .+....+..+ ..+.|.. ....+-.++.+|++++.|..|.+|+++ |
T Consensus 142 pDc~s~--vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-G 218 (420)
T KOG2096|consen 142 PDCKSV--VVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-G 218 (420)
T ss_pred CCcceE--EEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-C
Confidence 110000 0111111111 1111100 001223467899999999999999998 8
Q ss_pred eeeEEeecccccccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCC-ccceeeeeeeccccccccceeEEEeecCCCc
Q 022019 159 LLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPG-RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTG 236 (304)
Q Consensus 159 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 236 (304)
+.+..+..... .-+..+.+|+|++++ +|.---|++|.+--.. ..++.. .-...+.+|...|..++|+| +..
T Consensus 219 q~L~~idtnq~-----~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev-~rvf~LkGH~saV~~~aFsn-~S~ 291 (420)
T KOG2096|consen 219 QLLQSIDTNQS-----SNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEV-KRVFSLKGHQSAVLAAAFSN-SST 291 (420)
T ss_pred ceeeeeccccc-----cccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhh-hhhheeccchhheeeeeeCC-Ccc
Confidence 87777665443 445788999999999 4588889999874321 111111 11223488999999999999 788
Q ss_pred EEEEEecCCeEEEEecCCc----------------------eEe-------------------EEe------------cc
Q 022019 237 MLAIGSYSQTSAIYREDNM----------------------ELL-------------------YVL------------HG 263 (304)
Q Consensus 237 ~l~~~~~dg~i~i~d~~~~----------------------~~~-------------------~~~------------~~ 263 (304)
.+++.+.||+++|||++-. .++ ..+ ..
T Consensus 292 r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~~~e~~ 371 (420)
T KOG2096|consen 292 RAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASEDGKDYPELEDI 371 (420)
T ss_pred eeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcccCccchhHHHh
Confidence 9999999999999997411 010 001 13
Q ss_pred ccCCeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 264 QEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 264 ~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
|...|.+++|+++|++++++| |..++++.
T Consensus 372 h~~~Is~is~~~~g~~~atcG--dr~vrv~~ 400 (420)
T KOG2096|consen 372 HSTTISSISYSSDGKYIATCG--DRYVRVIR 400 (420)
T ss_pred hcCceeeEEecCCCcEEeeec--ceeeeeec
Confidence 677899999999999999998 88888876
No 65
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.96 E-value=3.3e-28 Score=190.90 Aligned_cols=227 Identities=17% Similarity=0.248 Sum_probs=170.1
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
-..+.+|...|.++++.|.|..|++|+.|.+|++||+........ ....+.-.....+.++.|
T Consensus 160 Ei~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~------------~fr~l~P~E~h~i~sl~y----- 222 (641)
T KOG0772|consen 160 EIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMR------------SFRQLQPCETHQINSLQY----- 222 (641)
T ss_pred eEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccch------------hhhccCcccccccceeee-----
Confidence 346789999999999999999999999999999999975432111 111123334577888888
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecc-------cccccccceEEEEECCCCc--EEEEEcCCeEEEEEcCC
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAY-------DAVDEITAAFSVAFNPTGT--KIFAGYNKSVRVFDVHR 203 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~~~~~~v~~i~~~~~~~--~l~~~~d~~i~v~d~~~ 203 (304)
++.|..|++.+.....+|+|-...+.....++. ...+|...+++.+|+|..+ +|.++.||++++||+..
T Consensus 223 --s~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~ 300 (641)
T KOG0772|consen 223 --SVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNN 300 (641)
T ss_pred --cCCCCeEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCC
Confidence 668888888888889999996544433333321 2235777899999999754 34467999999999987
Q ss_pred CCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce--EeEE-eccccC--CeEEEEECCCCc
Q 022019 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYV-LHGQEG--GVTHVQFSRDGN 278 (304)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~--~~~~-~~~~~~--~v~~~~~~~~~~ 278 (304)
.....+.+.... ..+..-++++++|+| ++.+||+|+.||.|.+|+..+.. +... -.+|.. .|+++.||+||+
T Consensus 301 ~k~q~qVik~k~--~~g~Rv~~tsC~~nr-dg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~ 377 (641)
T KOG0772|consen 301 TKSQLQVIKTKP--AGGKRVPVTSCAWNR-DGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGN 377 (641)
T ss_pred chhheeEEeecc--CCCcccCceeeecCC-CcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccc
Confidence 554433332222 134556789999999 77789999999999999986543 2222 246766 899999999999
Q ss_pred EEEEeeccCCeEEEEecccceeee
Q 022019 279 YLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 279 ~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
+|++=| .|+++++||++..++.+
T Consensus 378 ~LlSRg-~D~tLKvWDLrq~kkpL 400 (641)
T KOG0772|consen 378 YLLSRG-FDDTLKVWDLRQFKKPL 400 (641)
T ss_pred hhhhcc-CCCceeeeeccccccch
Confidence 999999 99999999999876654
No 66
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.96 E-value=5.3e-28 Score=177.52 Aligned_cols=223 Identities=19% Similarity=0.305 Sum_probs=174.1
Q ss_pred eecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccc-cccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 55 TSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYD-VNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
..+.|.+.|+++...+ .|+|+++|+.||.|.+||+++...-.. ...+. ..-.........|...|.++.|.|.
T Consensus 38 ~~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k---~~c~v~~~h~~~Hky~iss~~WyP~-- 112 (397)
T KOG4283|consen 38 FVRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAK---HKCIVAKQHENGHKYAISSAIWYPI-- 112 (397)
T ss_pred eeccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeh---eeeeccccCCccceeeeeeeEEeee--
Confidence 4568999999999998 899999999999999999975431000 00000 0000011123346678999999887
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCC---CcEEEEE-cCCeEEEEEcCCCCccc
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT---GTKIFAG-YNKSVRVFDVHRPGRDF 208 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~---~~~l~~~-~d~~i~v~d~~~~~~~~ 208 (304)
|...|.+++.|.++++||..+.+....+.... .|++-+++|- ..++|+| .+-.|++.|+..+
T Consensus 113 ----DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me~------~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SG---- 178 (397)
T KOG4283|consen 113 ----DTGMFTSSSFDHTLKVWDTNTLQEAVDFKMEG------KVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASG---- 178 (397)
T ss_pred ----cCceeecccccceEEEeecccceeeEEeecCc------eeehhhcChhhhcceEEEEecCCCcEEEEeccCC----
Confidence 66689999999999999999988887777665 7889999984 3466677 8889999999873
Q ss_pred eeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc-eEeEEe--------------ccccCCeEEEEE
Q 022019 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM-ELLYVL--------------HGQEGGVTHVQF 273 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~--------------~~~~~~v~~~~~ 273 (304)
.+...+.+|...|.++.|+|.....|++|+.||.|++||++.. .+...+ ..|.+.|.+++|
T Consensus 179 ----s~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~ 254 (397)
T KOG4283|consen 179 ----SFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAW 254 (397)
T ss_pred ----cceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeee
Confidence 3444558999999999999988889999999999999999754 233332 256778999999
Q ss_pred CCCCcEEEEeeccCCeEEEEecccceee
Q 022019 274 SRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 274 ~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+.+|.++++.+ .|..+++|+..+|+.-
T Consensus 255 tSd~~~l~~~g-td~r~r~wn~~~G~nt 281 (397)
T KOG4283|consen 255 TSDARYLASCG-TDDRIRVWNMESGRNT 281 (397)
T ss_pred cccchhhhhcc-CccceEEeecccCccc
Confidence 99999999999 9999999999988654
No 67
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=1e-27 Score=203.24 Aligned_cols=236 Identities=18% Similarity=0.314 Sum_probs=182.8
Q ss_pred cceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccc-cccccCCccceEEEeecCCeEEEEeec
Q 022019 50 YNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNAC-SLAKDQDSYEASLVVTEGESVYDFCWF 128 (304)
Q Consensus 50 ~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~ 128 (304)
.+.+-....|.+.|+|+.|+|||++||+|++|+.|.||..........+... ................|...|.+++|
T Consensus 59 ~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~W- 137 (942)
T KOG0973|consen 59 PKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNW- 137 (942)
T ss_pred chhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceecc-
Confidence 3455578899999999999999999999999999999998751111111110 11112233445567779999999999
Q ss_pred CccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcCCeEEEEEcCCCCc-
Q 022019 129 PHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGR- 206 (304)
Q Consensus 129 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~~i~v~d~~~~~~- 206 (304)
+|++.+|++++.|++|.+|+..+.+....+..|.. .|..+.|+|-|++||+ +.|++|+||++..-+-
T Consensus 138 ------sp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s-----~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~ 206 (942)
T KOG0973|consen 138 ------SPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQS-----LVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIE 206 (942)
T ss_pred ------CCCccEEEEecccceEEEEccccceeeeeeecccc-----cccceEECCccCeeeeecCCceEEEEEcccceee
Confidence 77999999999999999999999988888887776 8999999999999996 5999999999644110
Q ss_pred -----cc----------------------------------e----eeeeeeccccccccceeEEEeecC----C-----
Q 022019 207 -----DF----------------------------------E----KYSTLKGNKEGQAGIMSAIAFSPT----H----- 234 (304)
Q Consensus 207 -----~~----------------------------------~----~~~~~~~~~~~~~~~v~~~~~~p~----~----- 234 (304)
++ . ........+.+|.+++.++.|+|. .
T Consensus 207 k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~ 286 (942)
T KOG0973|consen 207 KSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGT 286 (942)
T ss_pred EeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCC
Confidence 00 0 000111245679999999999983 1
Q ss_pred ---C----cEEEEEecCCeEEEEecCCceEeEEec-cccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 235 ---T----GMLAIGSYSQTSAIYREDNMELLYVLH-GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 235 ---~----~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
. ..+|+|+.|++|.||.....+|+..+. -....|..++|+|||..|++++ .||+|.+..++..
T Consensus 287 ~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS-~DGtV~~i~Fee~ 357 (942)
T KOG0973|consen 287 STQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACS-LDGTVALIHFEEK 357 (942)
T ss_pred ccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEe-cCCeEEEEEcchH
Confidence 1 178899999999999998888876654 2356899999999999999999 9999999998764
No 68
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=2.2e-27 Score=175.58 Aligned_cols=216 Identities=17% Similarity=0.282 Sum_probs=168.6
Q ss_pred ceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 51 NQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
.++..+..|.++|++++.+ +.++|+|+.|-+|+|||+..... ......|...++++.|.+.
T Consensus 34 ~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~q-----------------lg~ll~HagsitaL~F~~~ 94 (362)
T KOG0294|consen 34 KPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQ-----------------LGILLSHAGSITALKFYPP 94 (362)
T ss_pred eccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhh-----------------hcceeccccceEEEEecCC
Confidence 4455778999999999995 89999999999999999985432 2355667789999998653
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCCccce
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~ 209 (304)
. ....|++|+.||.|.+|+...-..+.+++.|.. .|+.++.+|.+++.+ +|.|+.+++|++-.+...+.
T Consensus 95 ~-----S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~-----~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v 164 (362)
T KOG0294|consen 95 L-----SKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKG-----QVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFV 164 (362)
T ss_pred c-----chhheeeecCCCcEEEEEcCCeEEeeeeccccc-----ccceeEecCCCceEEEEcCCceeeeehhhcCcccee
Confidence 2 122799999999999999998888888888776 899999999999888 78999999999976432211
Q ss_pred ee----eee---ec----------------------ccc--ccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEe
Q 022019 210 KY----STL---KG----------------------NKE--GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELL 258 (304)
Q Consensus 210 ~~----~~~---~~----------------------~~~--~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~ 258 (304)
.. ... .. .+. .....+.++.|. ++..|++|.+|+.|.+||..+..+.
T Consensus 165 ~~L~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l--~~~~L~vG~d~~~i~~~D~ds~~~~ 242 (362)
T KOG0294|consen 165 LNLKNKATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATFL--DGSELLVGGDNEWISLKDTDSDTPL 242 (362)
T ss_pred eccCCcceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhccccceeeeec--CCceEEEecCCceEEEeccCCCccc
Confidence 00 000 00 000 001123444444 5668899999999999999999999
Q ss_pred EEeccccCCeEEEEE--CCCCcEEEEeeccCCeEEEEecccc
Q 022019 259 YVLHGQEGGVTHVQF--SRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 259 ~~~~~~~~~v~~~~~--~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
..+.+|...|.++.+ .|++.+|++++ .||.|+|||++..
T Consensus 243 ~~~~AH~~RVK~i~~~~~~~~~~lvTaS-SDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 243 TEFLAHENRVKDIASYTNPEHEYLVTAS-SDGFIKVWDIDME 283 (362)
T ss_pred eeeecchhheeeeEEEecCCceEEEEec-cCceEEEEEcccc
Confidence 999999999999985 67889999999 9999999999876
No 69
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.96 E-value=8.9e-27 Score=183.28 Aligned_cols=210 Identities=18% Similarity=0.222 Sum_probs=169.1
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+..|...++-.+|+|.|.|+|+|...|+|||||....+...+ .....-..+|.++.|
T Consensus 54 iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLK---------------nef~v~aG~I~Di~W------- 111 (603)
T KOG0318|consen 54 IYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILK---------------NEFQVLAGPIKDISW------- 111 (603)
T ss_pred eeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeee---------------eeeeeccccccccee-------
Confidence 6788999999999999999999999999999999875322111 011112368888888
Q ss_pred CCCccEEEEEeCC--CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcE-EEEE-cCCeEEEEEcCCCCcccee
Q 022019 135 DPTSCVFASTTRD--HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTK-IFAG-YNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 135 ~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-l~~~-~d~~i~v~d~~~~~~~~~~ 210 (304)
+++++.|++.++. +..+++-.++|..+..+..|.. .|.+++|-|...+ ++++ .|++|.+|+-. +
T Consensus 112 d~ds~RI~avGEGrerfg~~F~~DSG~SvGei~GhSr-----~ins~~~KpsRPfRi~T~sdDn~v~ffeGP----P--- 179 (603)
T KOG0318|consen 112 DFDSKRIAAVGEGRERFGHVFLWDSGNSVGEITGHSR-----RINSVDFKPSRPFRIATGSDDNTVAFFEGP----P--- 179 (603)
T ss_pred CCCCcEEEEEecCccceeEEEEecCCCccceeeccce-----eEeeeeccCCCceEEEeccCCCeEEEeeCC----C---
Confidence 7788888777653 2334444456777778887775 8999999998755 4454 99999999842 2
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec---cccCCeEEEEECCCCcEEEEeeccC
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH---GQEGGVTHVQFSRDGNYLYTGGRKD 287 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~d 287 (304)
..+......|..-|.++.|+| ++.++++++.||+|.+||-.+++.+..+. +|++.|.+++|+||+..+++++ .|
T Consensus 180 -FKFk~s~r~HskFV~~VRysP-DG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~S-aD 256 (603)
T KOG0318|consen 180 -FKFKSSFREHSKFVNCVRYSP-DGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVS-AD 256 (603)
T ss_pred -eeeeecccccccceeeEEECC-CCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEec-CC
Confidence 344455577888999999999 68899999999999999999999999998 8999999999999999999999 99
Q ss_pred CeEEEEecccceee
Q 022019 288 PYILCWDLRKAVQV 301 (304)
Q Consensus 288 ~~i~vwd~~~~~~~ 301 (304)
.+++|||+.+.+.+
T Consensus 257 kt~KIWdVs~~slv 270 (603)
T KOG0318|consen 257 KTIKIWDVSTNSLV 270 (603)
T ss_pred ceEEEEEeeccceE
Confidence 99999999988554
No 70
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.96 E-value=5e-27 Score=180.57 Aligned_cols=205 Identities=20% Similarity=0.283 Sum_probs=170.4
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
+.+++||...|+.+.|+|+...+++++.|..|+||...... .......|..+|+.+.-
T Consensus 254 l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s-----------------~~~~~~~h~~~V~~ls~----- 311 (506)
T KOG0289|consen 254 LATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSS-----------------EPTSSRPHEEPVTGLSL----- 311 (506)
T ss_pred hhhccCcceEEEEEEeccchhheeecCCcceEEeecccccc-----------------Cccccccccccceeeee-----
Confidence 44789999999999999999999999999999999876432 22244556678888766
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceee
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
+|.|.+|++++.||+..+.|++++.......... ....+++.+|+|||..+.+| .|+.++|||+...
T Consensus 312 --h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~---s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~------- 379 (506)
T KOG0289|consen 312 --HPTGEYLLSASNDGTWAFSDISSGSQLTVVSDET---SDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQ------- 379 (506)
T ss_pred --ccCCcEEEEecCCceEEEEEccCCcEEEEEeecc---ccceeEEeeEcCCceEEeccCCCceEEEEEcCCc-------
Confidence 6789999999999999999999998776655421 11268999999999999988 9999999999873
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccc-cCCeEEEEECCCCcEEEEeeccCCeE
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ-EGGVTHVQFSRDGNYLYTGGRKDPYI 290 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~d~~i 290 (304)
.....+.+|.++|..++|+. +|.+|+++++|+.|++||++..+...++.-. ..++.++.|.+.|.+|+.+| .|=.|
T Consensus 380 -~~~a~Fpght~~vk~i~FsE-NGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g-~~l~V 456 (506)
T KOG0289|consen 380 -TNVAKFPGHTGPVKAISFSE-NGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAG-SDLQV 456 (506)
T ss_pred -cccccCCCCCCceeEEEecc-CceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeec-ceeEE
Confidence 33444588999999999999 9999999999999999999988877777632 23799999999999999998 77666
Q ss_pred EEEe
Q 022019 291 LCWD 294 (304)
Q Consensus 291 ~vwd 294 (304)
++++
T Consensus 457 y~~~ 460 (506)
T KOG0289|consen 457 YICK 460 (506)
T ss_pred EEEe
Confidence 6666
No 71
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.96 E-value=2.1e-28 Score=182.09 Aligned_cols=212 Identities=16% Similarity=0.322 Sum_probs=169.3
Q ss_pred CCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (304)
+.++.+-|..|+|||+||++|+.||.|.+||..+++......- ....-..-+..+|.+++| +.|
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkY---------QAqd~fMMmd~aVlci~F-------SRD 274 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKY---------QAQDNFMMMDDAVLCISF-------SRD 274 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhh---------hhhcceeecccceEEEee-------ccc
Confidence 4567799999999999999999999999999988876433211 011123345578888877 889
Q ss_pred ccEEEEEeCCCCEEEEEcCCCeeeEEee-cccccccccceEEEEECCCCcEEEE-EcCCeEEEEEcCCCCccceeeeeee
Q 022019 138 SCVFASTTRDHPIHLWDATTGLLRCTYR-AYDAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLK 215 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~~i~v~d~~~~~~~~~~~~~~~ 215 (304)
...+++|+.||.|++|.+.+|.++..+. .|. ..|+++.|+.|+..+.+ +.|.++++--+..+ ...
T Consensus 275 sEMlAsGsqDGkIKvWri~tG~ClRrFdrAHt-----kGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSG--------K~L 341 (508)
T KOG0275|consen 275 SEMLASGSQDGKIKVWRIETGQCLRRFDRAHT-----KGVTCLSFSRDNSQILSASFDQTVRIHGLKSG--------KCL 341 (508)
T ss_pred HHHhhccCcCCcEEEEEEecchHHHHhhhhhc-----cCeeEEEEccCcchhhcccccceEEEeccccc--------hhH
Confidence 9999999999999999999999988775 333 38999999999998884 59999999998763 233
Q ss_pred ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecc--------------------------------
Q 022019 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG-------------------------------- 263 (304)
Q Consensus 216 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------------------------------- 263 (304)
..+.+|.+.|+...|.+ ++..+++++.||+|++|+.++.+++.+++.
T Consensus 342 KEfrGHsSyvn~a~ft~-dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~im 420 (508)
T KOG0275|consen 342 KEFRGHSSYVNEATFTD-DGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIM 420 (508)
T ss_pred HHhcCccccccceEEcC-CCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEE
Confidence 34488999999999999 788999999999999999876654433321
Q ss_pred ---------------ccCCeEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 264 ---------------QEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 264 ---------------~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
..+...+++.+|.|.++++.+ .|+.++.|.+.+|+.
T Consensus 421 n~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcig-ED~vlYCF~~~sG~L 471 (508)
T KOG0275|consen 421 NMQGQVVRSFSSGKREGGDFINAILSPKGEWIYCIG-EDGVLYCFSVLSGKL 471 (508)
T ss_pred eccceEEeeeccCCccCCceEEEEecCCCcEEEEEc-cCcEEEEEEeecCce
Confidence 123456677899999999999 999999999888753
No 72
>PTZ00421 coronin; Provisional
Probab=99.96 E-value=1.7e-26 Score=191.84 Aligned_cols=216 Identities=12% Similarity=0.159 Sum_probs=161.7
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCC-C
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP-T 137 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~ 137 (304)
|-..|.....++++..+++++.+.....|+...+......... +..........+|...|.+++| +| +
T Consensus 19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~----G~~~~~~~~l~GH~~~V~~v~f-------sP~d 87 (493)
T PTZ00421 19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDY----GKLASNPPILLGQEGPIIDVAF-------NPFD 87 (493)
T ss_pred ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeecccc----ccCCCCCceEeCCCCCEEEEEE-------cCCC
Confidence 4445666777788888888998888899987654322111110 1111112345678899999999 55 6
Q ss_pred ccEEEEEeCCCCEEEEEcCCCe-------eeEEeecccccccccceEEEEECCCC-cEEEE-EcCCeEEEEEcCCCCccc
Q 022019 138 SCVFASTTRDHPIHLWDATTGL-------LRCTYRAYDAVDEITAAFSVAFNPTG-TKIFA-GYNKSVRVFDVHRPGRDF 208 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~-~~d~~i~v~d~~~~~~~~ 208 (304)
+++|++|+.|++|++||+.++. .+..+..|. ..|.+++|+|++ .+|++ +.|+.|+|||++...
T Consensus 88 ~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~-----~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~--- 159 (493)
T PTZ00421 88 PQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHT-----KKVGIVSFHPSAMNVLASAGADMVVNVWDVERGK--- 159 (493)
T ss_pred CCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCC-----CcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCe---
Confidence 7899999999999999997652 234444443 489999999986 57775 499999999998631
Q ss_pred eeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCC-eEEEEECCCCcEEEEee---
Q 022019 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGG-VTHVQFSRDGNYLYTGG--- 284 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~--- 284 (304)
......+|...|.+++|+| ++.+|++++.|+.|+|||+++++.+.++.+|.+. +..+.|.+++..|++++
T Consensus 160 -----~~~~l~~h~~~V~sla~sp-dG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~ 233 (493)
T PTZ00421 160 -----AVEVIKCHSDQITSLEWNL-DGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSK 233 (493)
T ss_pred -----EEEEEcCCCCceEEEEEEC-CCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCC
Confidence 1122256788899999999 7789999999999999999999999999988765 45788999988888765
Q ss_pred ccCCeEEEEecccce
Q 022019 285 RKDPYILCWDLRKAV 299 (304)
Q Consensus 285 ~~d~~i~vwd~~~~~ 299 (304)
..|+.|++||+++..
T Consensus 234 s~Dr~VklWDlr~~~ 248 (493)
T PTZ00421 234 SQQRQIMLWDTRKMA 248 (493)
T ss_pred CCCCeEEEEeCCCCC
Confidence 147899999998754
No 73
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.96 E-value=3.2e-27 Score=182.52 Aligned_cols=217 Identities=19% Similarity=0.340 Sum_probs=165.6
Q ss_pred ecCCCCceeEEEEcCCC-CeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 56 SSIPNNFLKGIKWSPDG-SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 56 ~~~h~~~V~~i~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.-.|.+.|+.+++.|.. ..+|+.+..+.|.|||..+..-...... .-.....+.+|...-+.++|++.
T Consensus 120 ~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~-------~~~Pdl~L~gH~~eg~glsWn~~---- 188 (422)
T KOG0264|consen 120 KINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASG-------ECRPDLRLKGHEKEGYGLSWNRQ---- 188 (422)
T ss_pred eccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccc-------cCCCceEEEeecccccccccccc----
Confidence 35699999999999954 5677788899999999875432221110 11122244556566788899654
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCee-------eEEeecccccccccceEEEEECCCCcEEE--EEcCCeEEEEEcCCCC
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLL-------RCTYRAYDAVDEITAAFSVAFNPTGTKIF--AGYNKSVRVFDVHRPG 205 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~-------~~~~~~~~~~~~~~~v~~i~~~~~~~~l~--~~~d~~i~v~d~~~~~ 205 (304)
....+++++.|++|++||+..... ...+.. |...|..++|++-...++ +|.|+.+.|||+|...
T Consensus 189 --~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~-----h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~ 261 (422)
T KOG0264|consen 189 --QEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSG-----HEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNT 261 (422)
T ss_pred --cceeEeeccCCCcEEEEeccccccCCccccceEEeec-----CCcceehhhccccchhhheeecCCCeEEEEEcCCCC
Confidence 344799999999999999975432 223333 444899999999765555 5699999999999621
Q ss_pred ccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc-eEeEEeccccCCeEEEEECCCCc-EEEEe
Q 022019 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM-ELLYVLHGQEGGVTHVQFSRDGN-YLYTG 283 (304)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~-~l~~~ 283 (304)
........+|.+.+.|++|+|.++.+||+|+.|++|++||+|+. +++.++.+|+..|..+.|+|... .|+++
T Consensus 262 ------~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASS 335 (422)
T KOG0264|consen 262 ------SKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASS 335 (422)
T ss_pred ------CCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEec
Confidence 23333447899999999999999999999999999999999985 48899999999999999999765 56666
Q ss_pred eccCCeEEEEeccc
Q 022019 284 GRKDPYILCWDLRK 297 (304)
Q Consensus 284 ~~~d~~i~vwd~~~ 297 (304)
| .|+.+.|||+..
T Consensus 336 g-~D~rl~vWDls~ 348 (422)
T KOG0264|consen 336 G-TDRRLNVWDLSR 348 (422)
T ss_pred c-cCCcEEEEeccc
Confidence 6 999999999965
No 74
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=8.2e-26 Score=160.30 Aligned_cols=225 Identities=18% Similarity=0.256 Sum_probs=163.8
Q ss_pred eeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcccc------------ccccccccCCccceE--------
Q 022019 54 RTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDV------------NACSLAKDQDSYEAS-------- 113 (304)
Q Consensus 54 ~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~------------~~~~~~~~~~~~~~~-------- 113 (304)
+.-+.|++.|.|.+|+|+|.++++|+.|++|++..+......... ....+..+.......
T Consensus 83 kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagd 162 (350)
T KOG0641|consen 83 KRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGD 162 (350)
T ss_pred eeccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCc
Confidence 355789999999999999999999999999999876543321111 111111111111000
Q ss_pred ---------------EEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeec--ccccccccce
Q 022019 114 ---------------LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRA--YDAVDEITAA 176 (304)
Q Consensus 114 ---------------~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~~~~~v 176 (304)
...+|...|..+ ++-++-.+++|+.|.+|++||++-..++.++.. +...-..+.|
T Consensus 163 c~iy~tdc~~g~~~~a~sghtghilal--------yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessav 234 (350)
T KOG0641|consen 163 CKIYITDCGRGQGFHALSGHTGHILAL--------YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAV 234 (350)
T ss_pred ceEEEeecCCCCcceeecCCcccEEEE--------EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCccccee
Confidence 011111111111 123677899999999999999998877776643 2222344689
Q ss_pred EEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc
Q 022019 177 FSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255 (304)
Q Consensus 177 ~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~ 255 (304)
.+++.+|.|++|++| .|....+||++.+ .+...+..|...|.++.|+| +..++++|+.|..|++-|+...
T Consensus 235 aav~vdpsgrll~sg~~dssc~lydirg~--------r~iq~f~phsadir~vrfsp-~a~yllt~syd~~ikltdlqgd 305 (350)
T KOG0641|consen 235 AAVAVDPSGRLLASGHADSSCMLYDIRGG--------RMIQRFHPHSADIRCVRFSP-GAHYLLTCSYDMKIKLTDLQGD 305 (350)
T ss_pred EEEEECCCcceeeeccCCCceEEEEeeCC--------ceeeeeCCCccceeEEEeCC-CceEEEEecccceEEEeecccc
Confidence 999999999999998 9999999999873 22233367888999999999 9999999999999999998642
Q ss_pred ----eEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 256 ----ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 256 ----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
-++...-.|+..+..+.|+|..--+++.+ .|.++.+|-+.
T Consensus 306 la~el~~~vv~ehkdk~i~~rwh~~d~sfisss-adkt~tlwa~~ 349 (350)
T KOG0641|consen 306 LAHELPIMVVAEHKDKAIQCRWHPQDFSFISSS-ADKTATLWALN 349 (350)
T ss_pred hhhcCceEEEEeccCceEEEEecCccceeeecc-CcceEEEeccC
Confidence 24455567999999999999988888888 99999999764
No 75
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.96 E-value=1e-27 Score=188.20 Aligned_cols=217 Identities=19% Similarity=0.293 Sum_probs=164.5
Q ss_pred eeeeecCCCCceeEEEEcCCC-CeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 52 QFRTSSIPNNFLKGIKWSPDG-SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 52 ~~~~~~~h~~~V~~i~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
.+..-+||...++|.+|+|+. ..|+|++.||++||||+.+.+....+.... ......-+++.++|
T Consensus 260 Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k-----------~~~g~Rv~~tsC~~--- 325 (641)
T KOG0772|consen 260 DMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTK-----------PAGGKRVPVTSCAW--- 325 (641)
T ss_pred hhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeec-----------cCCCcccCceeeec---
Confidence 344568999999999999954 579999999999999998654321111111 00112235566666
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcCCeEEEEEcCCCCccce
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~~i~v~d~~~~~~~~~ 209 (304)
++++.+||+|+.||+|.+|+.........+.....+.....|+||.|+++|++|++ |.|+++++||++....++.
T Consensus 326 ----nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~ 401 (641)
T KOG0772|consen 326 ----NRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLN 401 (641)
T ss_pred ----CCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchh
Confidence 88999999999999999999865444444444443344448999999999999995 7999999999998655544
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEec------CCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEe
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY------SQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTG 283 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 283 (304)
....+.. ..+-+.++|+| +..+|++|+. .|.+.+||..+...+..+.-....|..+.|+|.=+.|++|
T Consensus 402 ~~tgL~t-----~~~~tdc~FSP-d~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~g 475 (641)
T KOG0772|consen 402 VRTGLPT-----PFPGTDCCFSP-DDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAG 475 (641)
T ss_pred hhcCCCc-----cCCCCccccCC-CceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheeee
Confidence 3333322 23457899999 7779999875 4679999999999999998778889999999998889999
Q ss_pred eccCCeEEEE
Q 022019 284 GRKDPYILCW 293 (304)
Q Consensus 284 ~~~d~~i~vw 293 (304)
+ .||.+++|
T Consensus 476 s-gdG~~~vy 484 (641)
T KOG0772|consen 476 S-GDGTAHVY 484 (641)
T ss_pred c-CCCceEEE
Confidence 8 89999887
No 76
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=4e-26 Score=177.98 Aligned_cols=204 Identities=17% Similarity=0.216 Sum_probs=168.2
Q ss_pred eeeecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 53 FRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
++.+.+|..+|..+.|+| ++..|++|++|+.+++||+.+.. +......|...|.+.+|.|.
T Consensus 103 LR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~-----------------v~~~l~~htDYVR~g~~~~~- 164 (487)
T KOG0310|consen 103 LRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAY-----------------VQAELSGHTDYVRCGDISPA- 164 (487)
T ss_pred HHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcE-----------------EEEEecCCcceeEeeccccC-
Confidence 347889999999999999 56688899999999999998542 22245567789999988654
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEcCCCe-eeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCcccee
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDATTGL-LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~ 210 (304)
++.++++|+.||.|++||++... .+..+. |..+|.++.+-|.|..|+++....|++||+-+++.
T Consensus 165 -----~~hivvtGsYDg~vrl~DtR~~~~~v~eln------hg~pVe~vl~lpsgs~iasAgGn~vkVWDl~~G~q---- 229 (487)
T KOG0310|consen 165 -----NDHIVVTGSYDGKVRLWDTRSLTSRVVELN------HGCPVESVLALPSGSLIASAGGNSVKVWDLTTGGQ---- 229 (487)
T ss_pred -----CCeEEEecCCCceEEEEEeccCCceeEEec------CCCceeeEEEcCCCCEEEEcCCCeEEEEEecCCce----
Confidence 55689999999999999999763 333332 33399999999999999988899999999987532
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeE
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYI 290 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i 290 (304)
.......|...|+|+++.. ++..|++|+-|+.|++||+.+.+.+..+. ..++|.+++.+|++..++.|. .||.+
T Consensus 230 ---ll~~~~~H~KtVTcL~l~s-~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~dd~t~viGm-snGlv 303 (487)
T KOG0310|consen 230 ---LLTSMFNHNKTVTCLRLAS-DSTRLLSGSLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPDDQTVVIGM-SNGLV 303 (487)
T ss_pred ---ehhhhhcccceEEEEEeec-CCceEeecccccceEEEEccceEEEEeee-cccceeeEEecCCCceEEEec-cccee
Confidence 2222245888899999999 67899999999999999999999999997 578999999999999999999 89988
Q ss_pred EEEec
Q 022019 291 LCWDL 295 (304)
Q Consensus 291 ~vwd~ 295 (304)
.+=+.
T Consensus 304 ~~rr~ 308 (487)
T KOG0310|consen 304 SIRRR 308 (487)
T ss_pred eeehh
Confidence 76643
No 77
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.95 E-value=2.7e-27 Score=180.91 Aligned_cols=214 Identities=19% Similarity=0.247 Sum_probs=166.5
Q ss_pred eeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEE
Q 022019 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV 115 (304)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (304)
...|++...+... ++.||.+.|+++.|......+++|+.|.+|++||+...........
T Consensus 243 ~r~Wnvd~~r~~~------TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~--------------- 301 (459)
T KOG0288|consen 243 LRLWNVDSLRLRH------TLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLP--------------- 301 (459)
T ss_pred eeeeeccchhhhh------hhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccc---------------
Confidence 3455556555554 7889999999999998776799999999999999986443222211
Q ss_pred eecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcCC
Q 022019 116 VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNK 194 (304)
Q Consensus 116 ~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~ 194 (304)
...+.+++- ....+++|..|++|++||.++..+....+.++ .|+++..++++..+.+ +.|.
T Consensus 302 ---~S~cnDI~~---------~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg------~vtSl~ls~~g~~lLsssRDd 363 (459)
T KOG0288|consen 302 ---GSQCNDIVC---------SISDVISGHFDKKVRFWDIRSADKTRSVPLGG------RVTSLDLSMDGLELLSSSRDD 363 (459)
T ss_pred ---cccccceEe---------cceeeeecccccceEEEeccCCceeeEeecCc------ceeeEeeccCCeEEeeecCCC
Confidence 123333332 23468899999999999999999988888766 8999999999998885 5999
Q ss_pred eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccC--CeEEEE
Q 022019 195 SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEG--GVTHVQ 272 (304)
Q Consensus 195 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~v~~~~ 272 (304)
++.+.|+++.+ ...++...........+.+.||| ++.++++|+.||.|+||+..++++...+..... .|++++
T Consensus 364 tl~viDlRt~e----I~~~~sA~g~k~asDwtrvvfSp-d~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~ 438 (459)
T KOG0288|consen 364 TLKVIDLRTKE----IRQTFSAEGFKCASDWTRVVFSP-DGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLS 438 (459)
T ss_pred ceeeeeccccc----EEEEeeccccccccccceeEECC-CCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEE
Confidence 99999998742 11222211112223388999999 888999999999999999999999888875444 599999
Q ss_pred ECCCCcEEEEeeccCCeEEEEe
Q 022019 273 FSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 273 ~~~~~~~l~~~~~~d~~i~vwd 294 (304)
|+|.|..|++++ .++.+.+|.
T Consensus 439 W~~sG~~Llsad-k~~~v~lW~ 459 (459)
T KOG0288|consen 439 WNPSGSGLLSAD-KQKAVTLWT 459 (459)
T ss_pred EcCCCchhhccc-CCcceEecC
Confidence 999999999999 999999993
No 78
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.95 E-value=1.7e-26 Score=174.87 Aligned_cols=212 Identities=20% Similarity=0.338 Sum_probs=162.4
Q ss_pred eeecCCCCceeEEEEcCCC---CeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 54 RTSSIPNNFLKGIKWSPDG---SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 54 ~~~~~h~~~V~~i~~s~~~---~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
..+.||.++|.+++|.-.. ..|++++.|.++++|.++.+........ ...+|...|.++..
T Consensus 138 ~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~-------------~~~GHk~~V~sVsv--- 201 (423)
T KOG0313|consen 138 KTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALK-------------VCRGHKRSVDSVSV--- 201 (423)
T ss_pred EEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHh-------------HhcccccceeEEEe---
Confidence 3788999999998886433 3699999999999999886654322211 11267788888765
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCC-------------------------eeeEEeecccccccccceEEEEECCCC
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTG-------------------------LLRCTYRAYDAVDEITAAFSVAFNPTG 185 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~-------------------------~~~~~~~~~~~~~~~~~v~~i~~~~~~ 185 (304)
.++|..+++|+.|..|.+|+..+. .++.++. +|..+|.++.|++.
T Consensus 202 ----~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~-----GHt~~Vs~V~w~d~- 271 (423)
T KOG0313|consen 202 ----DSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLE-----GHTEPVSSVVWSDA- 271 (423)
T ss_pred ----cCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEec-----ccccceeeEEEcCC-
Confidence 779999999999999999993211 1122222 35559999999984
Q ss_pred cEEE-EEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce---EeEEe
Q 022019 186 TKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME---LLYVL 261 (304)
Q Consensus 186 ~~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~ 261 (304)
..++ ++-|.+|+.||+.+++..... .....+.++..+| ...+|++|+.|..|++||.+++. +.++|
T Consensus 272 ~v~yS~SwDHTIk~WDletg~~~~~~---------~~~ksl~~i~~~~-~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~ 341 (423)
T KOG0313|consen 272 TVIYSVSWDHTIKVWDLETGGLKSTL---------TTNKSLNCISYSP-LSKLLASGSSDRHIRLWDPRTGDGSVVSQSL 341 (423)
T ss_pred CceEeecccceEEEEEeecccceeee---------ecCcceeEeeccc-ccceeeecCCCCceeecCCCCCCCceeEEee
Confidence 4555 679999999999885332221 1234589999999 78899999999999999998764 67788
Q ss_pred ccccCCeEEEEECCCCcE-EEEeeccCCeEEEEecccceeee
Q 022019 262 HGQEGGVTHVQFSRDGNY-LYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 262 ~~~~~~v~~~~~~~~~~~-l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
.+|.+.|.++.|+|...+ |++++ .|+++++||+++.+-.+
T Consensus 342 ~gH~nwVssvkwsp~~~~~~~S~S-~D~t~klWDvRS~k~pl 382 (423)
T KOG0313|consen 342 IGHKNWVSSVKWSPTNEFQLVSGS-YDNTVKLWDVRSTKAPL 382 (423)
T ss_pred ecchhhhhheecCCCCceEEEEEe-cCCeEEEEEeccCCCcc
Confidence 999999999999998776 55666 99999999999987443
No 79
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.95 E-value=1.8e-26 Score=192.08 Aligned_cols=201 Identities=19% Similarity=0.302 Sum_probs=171.1
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+.||.+.|+++++...+.+|++|+.|.++++||..++.... ....|...+.++..
T Consensus 244 ~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~-----------------~l~gh~stv~~~~~------- 299 (537)
T KOG0274|consen 244 RLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTH-----------------SLQGHTSSVRCLTI------- 299 (537)
T ss_pred eccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEE-----------------EecCCCceEEEEEc-------
Confidence 489999999999998878899999999999999988765532 34456678888765
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
....+++|+.|.+|++|++.++..+..+..|.. +|.++..+ +.++++| .|++|++||+.+ ..
T Consensus 300 --~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~-----~V~~v~~~--~~~lvsgs~d~~v~VW~~~~--------~~ 362 (537)
T KOG0274|consen 300 --DPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTG-----PVNCVQLD--EPLLVSGSYDGTVKVWDPRT--------GK 362 (537)
T ss_pred --cCceEeeccCCceEEEEeccCcceEEEeccccc-----cEEEEEec--CCEEEEEecCceEEEEEhhh--------ce
Confidence 445788899999999999999999988886554 99999998 6677755 999999999985 34
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc-eEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM-ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
+.....+|...|+++.+.+ . ..+++|+.|+.|++||+++. +++.++.+|..-+..+.+ .+++|++++ .|++|++
T Consensus 363 cl~sl~gH~~~V~sl~~~~-~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~--~~~~Lvs~~-aD~~Ik~ 437 (537)
T KOG0274|consen 363 CLKSLSGHTGRVYSLIVDS-E-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL--RDNFLVSSS-ADGTIKL 437 (537)
T ss_pred eeeeecCCcceEEEEEecC-c-ceEEeeeeccceEeecCCchhhhhhhhcCCccccccccc--ccceeEecc-ccccEEE
Confidence 4444578999999998877 3 68999999999999999999 999999999998877666 578899999 9999999
Q ss_pred Eecccceee
Q 022019 293 WDLRKAVQV 301 (304)
Q Consensus 293 wd~~~~~~~ 301 (304)
||..+++++
T Consensus 438 WD~~~~~~~ 446 (537)
T KOG0274|consen 438 WDAEEGECL 446 (537)
T ss_pred eecccCcee
Confidence 999998775
No 80
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=3.2e-26 Score=178.50 Aligned_cols=207 Identities=15% Similarity=0.256 Sum_probs=164.9
Q ss_pred ecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeC
Q 022019 56 SSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135 (304)
Q Consensus 56 ~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 135 (304)
+....+.|.+++|-.||++||.|+..|.|+|||+++..... ....|..++....|+|.
T Consensus 64 ~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR-----------------~~~ah~apv~~~~f~~~----- 121 (487)
T KOG0310|consen 64 FSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILR-----------------QLYAHQAPVHVTKFSPQ----- 121 (487)
T ss_pred HHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHH-----------------HHhhccCceeEEEeccc-----
Confidence 34456789999999999999999999999999976422221 33456688888888665
Q ss_pred CCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceeeee
Q 022019 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 136 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
++..|++|++|+.+++||+.+......+..|.. .|.+.+|+|....++ +| .||.|++||++...... ..
T Consensus 122 -d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htD-----YVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v---~e 192 (487)
T KOG0310|consen 122 -DNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTD-----YVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRV---VE 192 (487)
T ss_pred -CCeEEEecCCCceEEEEEcCCcEEEEEecCCcc-----eeEeeccccCCCeEEEecCCCceEEEEEeccCCcee---EE
Confidence 677899999999999999998876445555554 999999999877555 66 99999999999743111 11
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC-ceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-MELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
..|..+|..+.+-| ++.++++++. ..|++||+-+ ++.+..+..|...|+|+.+..++..|++++ -|+.+++
T Consensus 193 -----lnhg~pVe~vl~lp-sgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~s-LD~~VKV 264 (487)
T KOG0310|consen 193 -----LNHGCPVESVLALP-SGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGS-LDRHVKV 264 (487)
T ss_pred -----ecCCCceeeEEEcC-CCCEEEEcCC-CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecc-cccceEE
Confidence 45788899999999 7778888764 5799999985 455666666999999999999999999999 9999999
Q ss_pred Eecccceee
Q 022019 293 WDLRKAVQV 301 (304)
Q Consensus 293 wd~~~~~~~ 301 (304)
||+.+-+.+
T Consensus 265 fd~t~~Kvv 273 (487)
T KOG0310|consen 265 FDTTNYKVV 273 (487)
T ss_pred EEccceEEE
Confidence 998776543
No 81
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.95 E-value=3.5e-25 Score=166.96 Aligned_cols=212 Identities=12% Similarity=0.140 Sum_probs=179.4
Q ss_pred ceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 51 NQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
..+..+..|++.|.+++.+|+.++++||+.|..-.||++.++... .....|+..|.++.|
T Consensus 55 dS~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~-----------------~eltgHKDSVt~~~F--- 114 (399)
T KOG0296|consen 55 DSLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFA-----------------GELTGHKDSVTCCSF--- 114 (399)
T ss_pred cceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcce-----------------eEecCCCCceEEEEE---
Confidence 344578899999999999999999999999999999999876532 245567799999988
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccce
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~ 209 (304)
+.+|.+||+|.-+|.|+||...++.....+...-. .+.=+.|+|.+..|++| .||.+.+|.+...
T Consensus 115 ----shdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~-----dieWl~WHp~a~illAG~~DGsvWmw~ip~~----- 180 (399)
T KOG0296|consen 115 ----SHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVE-----DIEWLKWHPRAHILLAGSTDGSVWMWQIPSQ----- 180 (399)
T ss_pred ----ccCceEEEecCCCccEEEEEcccCceEEEeecccC-----ceEEEEecccccEEEeecCCCcEEEEECCCc-----
Confidence 88999999999999999999999987777652222 67789999999999977 9999999999762
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc-CCeEEEEECCCCcEEEEeeccCC
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE-GGVTHVQFSRDGNYLYTGGRKDP 288 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~d~ 288 (304)
.......+|..++++=.|.| +++.++++..||+|++||+.++.++..+.+.. ....++.++..+..++.|+ .++
T Consensus 181 ---~~~kv~~Gh~~~ct~G~f~p-dGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~-~e~ 255 (399)
T KOG0296|consen 181 ---ALCKVMSGHNSPCTCGEFIP-DGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGN-SEG 255 (399)
T ss_pred ---ceeeEecCCCCCcccccccC-CCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEecc-CCc
Confidence 12222378999999999999 68899999999999999999999999987433 3578899999999999998 999
Q ss_pred eEEEEecccceee
Q 022019 289 YILCWDLRKAVQV 301 (304)
Q Consensus 289 ~i~vwd~~~~~~~ 301 (304)
.+++-+..+|+.+
T Consensus 256 ~~~~~~~~sgKVv 268 (399)
T KOG0296|consen 256 VACGVNNGSGKVV 268 (399)
T ss_pred cEEEEccccceEE
Confidence 9999998888765
No 82
>PTZ00420 coronin; Provisional
Probab=99.95 E-value=6.3e-25 Score=183.59 Aligned_cols=182 Identities=18% Similarity=0.300 Sum_probs=136.9
Q ss_pred ecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCC
Q 022019 78 SSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 157 (304)
Q Consensus 78 ~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 157 (304)
|+.++.|++|+.... ........|...|.+++|+|. ++.+|++|+.||+|++||+.+
T Consensus 50 GG~~gvI~L~~~~r~-----------------~~v~~L~gH~~~V~~lafsP~------~~~lLASgS~DgtIrIWDi~t 106 (568)
T PTZ00420 50 GGLIGAIRLENQMRK-----------------PPVIKLKGHTSSILDLQFNPC------FSEILASGSEDLTIRVWEIPH 106 (568)
T ss_pred CCceeEEEeeecCCC-----------------ceEEEEcCCCCCEEEEEEcCC------CCCEEEEEeCCCeEEEEECCC
Confidence 556778888876532 112244567789999999442 367999999999999999986
Q ss_pred Cee--------eEEeecccccccccceEEEEECCCCcEE-EE-EcCCeEEEEEcCCCCccceeeeeeeccccccccceeE
Q 022019 158 GLL--------RCTYRAYDAVDEITAAFSVAFNPTGTKI-FA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSA 227 (304)
Q Consensus 158 ~~~--------~~~~~~~~~~~~~~~v~~i~~~~~~~~l-~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~ 227 (304)
+.. ...+..| ...|.+++|+|++..+ ++ +.|+.|++||++..... ..+ .+...|.+
T Consensus 107 ~~~~~~~i~~p~~~L~gH-----~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~----~~i-----~~~~~V~S 172 (568)
T PTZ00420 107 NDESVKEIKDPQCILKGH-----KKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRA----FQI-----NMPKKLSS 172 (568)
T ss_pred CCccccccccceEEeecC-----CCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEE----EEE-----ecCCcEEE
Confidence 421 2233333 3489999999998765 44 48999999999874211 111 13456999
Q ss_pred EEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEE-----EEECCCCcEEEEeeccCC----eEEEEecccc
Q 022019 228 IAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTH-----VQFSRDGNYLYTGGRKDP----YILCWDLRKA 298 (304)
Q Consensus 228 ~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~l~~~~~~d~----~i~vwd~~~~ 298 (304)
++|+| ++.+|++++.|+.|+|||+++++.+.++.+|.+.+.. ..|++++.+|+++| .|+ .|+|||+++.
T Consensus 173 lswsp-dG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG-~d~~~~R~VkLWDlr~~ 250 (568)
T PTZ00420 173 LKWNI-KGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTG-FSKNNMREMKLWDLKNT 250 (568)
T ss_pred EEECC-CCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEE-cCCCCccEEEEEECCCC
Confidence 99999 7779999999999999999999999999999876433 34568999999988 664 7999999963
No 83
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.95 E-value=9.8e-26 Score=173.55 Aligned_cols=203 Identities=20% Similarity=0.313 Sum_probs=168.9
Q ss_pred CCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
...++++...|....++||+.|..+.++|...+.... +..+|...|..+.+ +|+..
T Consensus 219 ~pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~-----------------~~~Gh~kki~~v~~-------~~~~~ 274 (506)
T KOG0289|consen 219 TPGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILA-----------------TLKGHTKKITSVKF-------HKDLD 274 (506)
T ss_pred CCCeeEEeecCCCCcceecCCCCceEEEecchhhhhh-----------------hccCcceEEEEEEe-------ccchh
Confidence 3568888888887899999999999999988665433 34455578888877 66777
Q ss_pred EEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcCCeEEEEEcCCCCccceeeeeeeccc
Q 022019 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNK 218 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 218 (304)
.+++++.|..|++|.............|.. +|+.+..+|.|.||+. +.|+++.+.|++.+. .+.....
T Consensus 275 ~v~~aSad~~i~vws~~~~s~~~~~~~h~~-----~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~----~lt~vs~-- 343 (506)
T KOG0289|consen 275 TVITASADEIIRVWSVPLSSEPTSSRPHEE-----PVTGLSLHPTGEYLLSASNDGTWAFSDISSGS----QLTVVSD-- 343 (506)
T ss_pred heeecCCcceEEeeccccccCccccccccc-----cceeeeeccCCcEEEEecCCceEEEEEccCCc----EEEEEee--
Confidence 899999999999999887666656665554 9999999999999995 599999999998752 1122111
Q ss_pred cccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 219 ~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
....-.+++.+|+| ++.+|.+|+.||.|+|||+.+...+..|.+|.++|..++|+.+|-||++++ +|+.|++||+|..
T Consensus 344 ~~s~v~~ts~~fHp-DgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~a-dd~~V~lwDLRKl 421 (506)
T KOG0289|consen 344 ETSDVEYTSAAFHP-DGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAA-DDGSVKLWDLRKL 421 (506)
T ss_pred ccccceeEEeeEcC-CceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEe-cCCeEEEEEehhh
Confidence 12334589999999 888999999999999999999999999999999999999999999999999 9999999999976
Q ss_pred e
Q 022019 299 V 299 (304)
Q Consensus 299 ~ 299 (304)
+
T Consensus 422 ~ 422 (506)
T KOG0289|consen 422 K 422 (506)
T ss_pred c
Confidence 5
No 84
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.95 E-value=3.3e-26 Score=172.42 Aligned_cols=243 Identities=16% Similarity=0.259 Sum_probs=173.8
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccc---------c-
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSL---------A- 104 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~---------~- 104 (304)
.+..|++....... .+..|.+.|.+|++.. ..+++++.|++|+.|-+..... ..+..... .
T Consensus 90 ~VkiWnlsqR~~~~------~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~~p~-~tilg~s~~~gIdh~~~~~ 160 (433)
T KOG0268|consen 90 EVKIWNLSQRECIR------TFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDGPPL-HTILGKSVYLGIDHHRKNS 160 (433)
T ss_pred eEEEEehhhhhhhh------eeecccCceeeEEecc--cceEEecCCcceeeeeccCCcc-eeeeccccccccccccccc
Confidence 34455555554443 7889999999999986 6789999999999998654211 00000000 0
Q ss_pred --ccCCccceEEEeecCCeEEEEeecCc---cceeCCCc-cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEE
Q 022019 105 --KDQDSYEASLVVTEGESVYDFCWFPH---MSASDPTS-CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFS 178 (304)
Q Consensus 105 --~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~ 178 (304)
................++.++.|... ++.|+|.. ..|++|+.|+.|.+||++++.++....... .-+.
T Consensus 161 ~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~m------RTN~ 234 (433)
T KOG0268|consen 161 VFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTM------RTNT 234 (433)
T ss_pred cccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeec------cccc
Confidence 00011112233344556777777443 34556654 467788899999999999998887665543 4568
Q ss_pred EEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceE
Q 022019 179 VAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL 257 (304)
Q Consensus 179 i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~ 257 (304)
|+|+|.+-.++++ .|..++.||++... .......+|.+.|.+++|+| .|.-+++||.|.+|+||..+.+..
T Consensus 235 IswnPeafnF~~a~ED~nlY~~DmR~l~-------~p~~v~~dhvsAV~dVdfsp-tG~EfvsgsyDksIRIf~~~~~~S 306 (433)
T KOG0268|consen 235 ICWNPEAFNFVAANEDHNLYTYDMRNLS-------RPLNVHKDHVSAVMDVDFSP-TGQEFVSGSYDKSIRIFPVNHGHS 306 (433)
T ss_pred eecCccccceeeccccccceehhhhhhc-------ccchhhcccceeEEEeccCC-CcchhccccccceEEEeecCCCcc
Confidence 9999977666666 99999999998753 33344478999999999999 788999999999999999987754
Q ss_pred eEEeccc-cCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 258 LYVLHGQ-EGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 258 ~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
-..+... -..|.++.||.|.+|+++|+ +|+.|++|.....+++
T Consensus 307 RdiYhtkRMq~V~~Vk~S~Dskyi~SGS-dd~nvRlWka~Asekl 350 (433)
T KOG0268|consen 307 RDIYHTKRMQHVFCVKYSMDSKYIISGS-DDGNVRLWKAKASEKL 350 (433)
T ss_pred hhhhhHhhhheeeEEEEeccccEEEecC-CCcceeeeecchhhhc
Confidence 4333211 23699999999999999999 9999999988765543
No 85
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=4.6e-25 Score=162.89 Aligned_cols=249 Identities=18% Similarity=0.314 Sum_probs=178.5
Q ss_pred cHHhhccccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcC--CCCeEEEecCCCeEEEeeCCCCCCccccc
Q 022019 22 TEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP--DGSSFLTSSEDKTLRIFSLPENGISYDVN 99 (304)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~--~~~~l~s~~~dg~v~vwd~~~~~~~~~~~ 99 (304)
.++++.++....| +.. ..-..+......+.|.+.|..+.|.+ -|+.+|+++.|++++||.-.......
T Consensus 28 mAtCSsDq~vkI~-----d~~--~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~--- 97 (361)
T KOG2445|consen 28 MATCSSDQTVKIW-----DST--SDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEA--- 97 (361)
T ss_pred eeeccCCCcEEEE-----ecc--CCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeeccccccc---
Confidence 3445555555544 321 11223344557789999999999976 68999999999999999753211110
Q ss_pred cccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeeccccc--------c
Q 022019 100 ACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAV--------D 171 (304)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--------~ 171 (304)
.+...............|++++|.|.. -|-.+++++.||.++||+.-..-.+..+...... .
T Consensus 98 -----~~~~Wv~~ttl~DsrssV~DV~FaP~h-----lGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~ 167 (361)
T KOG2445|consen 98 -----HGRRWVRRTTLVDSRSSVTDVKFAPKH-----LGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGK 167 (361)
T ss_pred -----ccceeEEEEEeecCCcceeEEEecchh-----cceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccc
Confidence 011223334555667899999998854 4568999999999999987654333322221111 2
Q ss_pred cccceEEEEECCC---CcEEEEEcCC------eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCC---cEEE
Q 022019 172 EITAAFSVAFNPT---GTKIFAGYNK------SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHT---GMLA 239 (304)
Q Consensus 172 ~~~~v~~i~~~~~---~~~l~~~~d~------~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~---~~l~ 239 (304)
+..+..|+.|+|. ..+|++|.|. .++||......+.......+ .+|..+|++++|.|+-+ .+||
T Consensus 168 ~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L----~d~~dpI~di~wAPn~Gr~y~~lA 243 (361)
T KOG2445|consen 168 NKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAEL----PDHTDPIRDISWAPNIGRSYHLLA 243 (361)
T ss_pred ccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhc----CCCCCcceeeeeccccCCceeeEE
Confidence 3447789999985 4678888665 89999987766555444443 58899999999999644 4899
Q ss_pred EEecCCeEEEEecCCc--------------------eEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 240 IGSYSQTSAIYREDNM--------------------ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 240 ~~~~dg~i~i~d~~~~--------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
+++.|| |+||.++.. +.+..+..|.+.|..+.|+-.|..|++.| .||+|++|...
T Consensus 244 vA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStG-dDG~VRLWkan 318 (361)
T KOG2445|consen 244 VATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTG-DDGCVRLWKAN 318 (361)
T ss_pred EeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecC-CCceeeehhhh
Confidence 999999 999998631 34566779999999999999999999999 99999999753
No 86
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=1.7e-25 Score=160.16 Aligned_cols=215 Identities=18% Similarity=0.244 Sum_probs=164.0
Q ss_pred ceeeeecCCCCceeEEEEcC--CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeec
Q 022019 51 NQFRTSSIPNNFLKGIKWSP--DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWF 128 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~--~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 128 (304)
+.+..+.||.++|+.++|.. -|..||++++||.|.||.-.++..... .....|...|.+++|.
T Consensus 47 ~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~---------------~e~~~h~~SVNsV~wa 111 (299)
T KOG1332|consen 47 KLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKA---------------YEHAAHSASVNSVAWA 111 (299)
T ss_pred eeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhh---------------hhhhhhcccceeeccc
Confidence 44668999999999999976 899999999999999998876533211 1233466899999998
Q ss_pred CccceeCCCccEEEEEeCCCCEEEEEcCCC-ee--eEEeecccccccccceEEEEECCC---C-----------cEEEE-
Q 022019 129 PHMSASDPTSCVFASTTRDHPIHLWDATTG-LL--RCTYRAYDAVDEITAAFSVAFNPT---G-----------TKIFA- 190 (304)
Q Consensus 129 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~--~~~~~~~~~~~~~~~v~~i~~~~~---~-----------~~l~~- 190 (304)
|+. -|-.|++++.||.|.|.+.+.. .. ...... |...|++++|.|. | +.|++
T Consensus 112 phe-----ygl~LacasSDG~vsvl~~~~~g~w~t~ki~~a-----H~~GvnsVswapa~~~g~~~~~~~~~~~krlvSg 181 (299)
T KOG1332|consen 112 PHE-----YGLLLACASSDGKVSVLTYDSSGGWTTSKIVFA-----HEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSG 181 (299)
T ss_pred ccc-----cceEEEEeeCCCcEEEEEEcCCCCccchhhhhc-----cccccceeeecCcCCCccccccCcccccceeecc
Confidence 853 4558999999999999998754 11 111222 3348999999986 4 45775
Q ss_pred EcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCC---CcEEEEEecCCeEEEEecCCce---EeEEeccc
Q 022019 191 GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTH---TGMLAIGSYSQTSAIYREDNME---LLYVLHGQ 264 (304)
Q Consensus 191 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~---~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~ 264 (304)
|.|..|+||+..... ..+...+.+|.+.|+.++|.|.. ...|++++.||++.||..+... ....++..
T Consensus 182 GcDn~VkiW~~~~~~------w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f 255 (299)
T KOG1332|consen 182 GCDNLVKIWKFDSDS------WKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEF 255 (299)
T ss_pred CCccceeeeecCCcc------hhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcccccccccC
Confidence 599999999997641 22333358999999999999954 3589999999999999776321 12233345
Q ss_pred cCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 265 EGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 265 ~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
...+..++||+.|..|+.++ .|+.+.+|.-+.
T Consensus 256 ~~~~w~vSWS~sGn~LaVs~-GdNkvtlwke~~ 287 (299)
T KOG1332|consen 256 PDVVWRVSWSLSGNILAVSG-GDNKVTLWKENV 287 (299)
T ss_pred CcceEEEEEeccccEEEEec-CCcEEEEEEeCC
Confidence 56899999999999999999 999999997654
No 87
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.94 E-value=2e-26 Score=176.20 Aligned_cols=205 Identities=18% Similarity=0.268 Sum_probs=162.1
Q ss_pred eeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 54 RTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 54 ~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
.++.|..++|+++.|.+++.++++++.|+.+++|++....... .+.+|...|+++.|.-
T Consensus 213 ~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~-----------------TLsGHtdkVt~ak~~~---- 271 (459)
T KOG0288|consen 213 STLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRH-----------------TLSGHTDKVTAAKFKL---- 271 (459)
T ss_pred hhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhh-----------------hhcccccceeeehhhc----
Confidence 3677889999999999999999999999999999998654433 3334668888887732
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeee
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~ 212 (304)
....+++|+.|.+|++||+....+..++-... .+..|..+ ...+++| .|++|++||++..... .
T Consensus 272 ---~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S------~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~----~ 336 (459)
T KOG0288|consen 272 ---SHSRVVSGSADRTIKLWDLQKAYCSKTVLPGS------QCNDIVCS--ISDVISGHFDKKVRFWDIRSADKT----R 336 (459)
T ss_pred ---cccceeeccccchhhhhhhhhhheeccccccc------cccceEec--ceeeeecccccceEEEeccCCcee----e
Confidence 33349999999999999999887776655433 55566665 4455677 9999999999874211 1
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccc----cCCeEEEEECCCCcEEEEeeccCC
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ----EGGVTHVQFSRDGNYLYTGGRKDP 288 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~d~ 288 (304)
. .+ -.+.|+++..++ ++..+++++.|.++.++|+++.+....+... ....+.+.|||++.|+++|+ .||
T Consensus 337 s----v~-~gg~vtSl~ls~-~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS-~dg 409 (459)
T KOG0288|consen 337 S----VP-LGGRVTSLDLSM-DGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGS-ADG 409 (459)
T ss_pred E----ee-cCcceeeEeecc-CCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeecc-CCC
Confidence 1 12 234799999999 7778888899999999999999887777632 23488999999999999999 999
Q ss_pred eEEEEecccceee
Q 022019 289 YILCWDLRKAVQV 301 (304)
Q Consensus 289 ~i~vwd~~~~~~~ 301 (304)
.|+||++.+++..
T Consensus 410 sv~iW~v~tgKlE 422 (459)
T KOG0288|consen 410 SVYIWSVFTGKLE 422 (459)
T ss_pred cEEEEEccCceEE
Confidence 9999999998764
No 88
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=1.7e-24 Score=160.49 Aligned_cols=210 Identities=21% Similarity=0.277 Sum_probs=158.0
Q ss_pred ceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 51 NQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
+-++-+.||...|++|+.+|-++.+++++.|++|++||++..+... +.... .+.
T Consensus 91 kylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg-----------------~l~~~---------~~p 144 (311)
T KOG1446|consen 91 KYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQG-----------------LLNLS---------GRP 144 (311)
T ss_pred ceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCce-----------------EEecC---------CCc
Confidence 4566889999999999999988999999999999999998443211 11111 122
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCC--eeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCcc
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTG--LLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRD 207 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~ 207 (304)
..+++|+|-++|++.....|++||++.- .+..++.... ......+.|.|+|+|++|+.+ ..+.+++.|.-.+.
T Consensus 145 i~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~--~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~-- 220 (311)
T KOG1446|consen 145 IAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITD--NDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGT-- 220 (311)
T ss_pred ceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCC--CCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCc--
Confidence 3466999999999998889999999853 3444444432 222378899999999999966 88899999987643
Q ss_pred ceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecc-ccCCeEEEEECCCCcEEEEeecc
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG-QEGGVTHVQFSRDGNYLYTGGRK 286 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~ 286 (304)
....+.....+... ..+.+|+| +++++++|+.||+|++|+++++..+..+.+ +.+++.++.|+|.-.++++++
T Consensus 221 --~~~tfs~~~~~~~~-~~~a~ftP-ds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~-- 294 (311)
T KOG1446|consen 221 --VKSTFSGYPNAGNL-PLSATFTP-DSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSAS-- 294 (311)
T ss_pred --EeeeEeeccCCCCc-ceeEEECC-CCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecC--
Confidence 11222222122222 25788999 788999999999999999999999999998 688999999999877777654
Q ss_pred CCeEEEEeccc
Q 022019 287 DPYILCWDLRK 297 (304)
Q Consensus 287 d~~i~vwd~~~ 297 (304)
..+.+|=...
T Consensus 295 -s~l~fw~p~~ 304 (311)
T KOG1446|consen 295 -SNLVFWLPDE 304 (311)
T ss_pred -ceEEEEeccc
Confidence 5788886654
No 89
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.94 E-value=3.2e-25 Score=181.46 Aligned_cols=206 Identities=17% Similarity=0.328 Sum_probs=165.0
Q ss_pred ceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEE
Q 022019 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF 141 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 141 (304)
.+.+..|.|.++++++|...|.+.+||+........+ ..|...+++++- +||+..+
T Consensus 414 y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti-----------------~AHdgaIWsi~~-------~pD~~g~ 469 (888)
T KOG0306|consen 414 YILASKFVPGDRYIVLGTKNGELQVFDLASASLVETI-----------------RAHDGAIWSISL-------SPDNKGF 469 (888)
T ss_pred cEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhh-----------------hccccceeeeee-------cCCCCce
Confidence 6777777777777777777777888877654433222 245577877765 8899999
Q ss_pred EEEeCCCCEEEEEcCC-----CeeeE--EeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeee
Q 022019 142 ASTTRDHPIHLWDATT-----GLLRC--TYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 142 ~~~~~dg~i~i~d~~~-----~~~~~--~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
++|+.|.+|++||+.- +.... .+.......-...|.|+.+||||+++++| -|++|+||-+.+ ..
T Consensus 470 vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDt--------lK 541 (888)
T KOG0306|consen 470 VTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDT--------LK 541 (888)
T ss_pred EEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecc--------ee
Confidence 9999999999999741 21111 11111112223489999999999999999 999999999987 33
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEE
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCW 293 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vw 293 (304)
+.-...||.-||.||..+| ++.++++||.|..|++|-++-|.+-.++.+|...|.++.|-|+...++++| .|+.|+-|
T Consensus 542 FflsLYGHkLPV~smDIS~-DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~g-KD~kvKqW 619 (888)
T KOG0306|consen 542 FFLSLYGHKLPVLSMDISP-DSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCG-KDGKVKQW 619 (888)
T ss_pred eeeeecccccceeEEeccC-CcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEec-CcceEEee
Confidence 4444589999999999999 788999999999999999999999999999999999999999999999999 99999999
Q ss_pred ecccceee
Q 022019 294 DLRKAVQV 301 (304)
Q Consensus 294 d~~~~~~~ 301 (304)
|-...+++
T Consensus 620 Dg~kFe~i 627 (888)
T KOG0306|consen 620 DGEKFEEI 627 (888)
T ss_pred chhhhhhh
Confidence 98876655
No 90
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=3e-26 Score=184.52 Aligned_cols=242 Identities=19% Similarity=0.261 Sum_probs=187.2
Q ss_pred hcHHhhccccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcccccc
Q 022019 21 VTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNA 100 (304)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 100 (304)
+..+++.|.....|.. ..............+..|.+.|+.+....+|+-|++++.|-+|++|+.....
T Consensus 39 yLfTgGRDg~i~~W~~-----~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~------- 106 (735)
T KOG0308|consen 39 YLFTGGRDGIIRLWSV-----TQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDN------- 106 (735)
T ss_pred eEEecCCCceEEEecc-----ccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCc-------
Confidence 4555666666666643 3222211111234778999999999999999999999999999999987442
Q ss_pred ccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCee--eEEeec---cccc-cccc
Q 022019 101 CSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLL--RCTYRA---YDAV-DEIT 174 (304)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~---~~~~-~~~~ 174 (304)
.........|...|.++++. -++..++|+|+-|+.|++||+.++.. +..+.. .... ++..
T Consensus 107 --------~~c~stir~H~DYVkcla~~------ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~ 172 (735)
T KOG0308|consen 107 --------TFCMSTIRTHKDYVKCLAYI------AKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKD 172 (735)
T ss_pred --------chhHhhhhcccchheeeeec------ccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCcc
Confidence 11112344566788888763 34778999999999999999998732 222211 1111 4556
Q ss_pred ceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC
Q 022019 175 AAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~ 253 (304)
.|++++-++.|..|++| ..+.+++||.++..+. .. ..+|...|.++..++ +|..+++++.||+|++||+.
T Consensus 173 siYSLA~N~t~t~ivsGgtek~lr~wDprt~~ki----mk----LrGHTdNVr~ll~~d-DGt~~ls~sSDgtIrlWdLg 243 (735)
T KOG0308|consen 173 SIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKI----MK----LRGHTDNVRVLLVND-DGTRLLSASSDGTIRLWDLG 243 (735)
T ss_pred ceeeeecCCcceEEEecCcccceEEeccccccce----ee----eeccccceEEEEEcC-CCCeEeecCCCceEEeeecc
Confidence 89999999999888865 9999999999885321 11 268999999999999 78899999999999999999
Q ss_pred CceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 254 NMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 254 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
..+++.++..|+..|+++..+|+-.++++|+ .||.|..=|+++.
T Consensus 244 qQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~-rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 244 QQRCLATYIVHKEGVWALQSSPSFTHVYSGG-RDGNIYRTDLRNP 287 (735)
T ss_pred ccceeeeEEeccCceEEEeeCCCcceEEecC-CCCcEEecccCCc
Confidence 9999999999999999999999999999999 9999999999883
No 91
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=2.1e-25 Score=170.86 Aligned_cols=215 Identities=18% Similarity=0.250 Sum_probs=171.8
Q ss_pred cceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecC
Q 022019 50 YNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP 129 (304)
Q Consensus 50 ~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 129 (304)
.....++..|.+.|+-+.||++|+||||++.|.+..+|++..... -.......+|..+|..+.|
T Consensus 214 ~qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~--------------~kl~~tlvgh~~~V~yi~w-- 277 (519)
T KOG0293|consen 214 SQTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVH--------------FKLKKTLVGHSQPVSYIMW-- 277 (519)
T ss_pred chhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcc--------------eeeeeeeecccCceEEEEE--
Confidence 345568889999999999999999999999999999999764321 1122356678889999988
Q ss_pred ccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccc
Q 022019 130 HMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDF 208 (304)
Q Consensus 130 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~ 208 (304)
|||.+++++|+.|..+.+||+.+|.....+... +...+.+.+|.|||..+++| .|++|..||+... ..
T Consensus 278 -----SPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~----~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn--~~ 346 (519)
T KOG0293|consen 278 -----SPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSG----LGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGN--IL 346 (519)
T ss_pred -----CCCCCeEEecCchHheeeccCCcchhhhhcccC----cCCCcceeEEccCCceeEecCCCCcEEEecCCcc--hh
Confidence 889999999999999999999999887766543 12378899999999999977 9999999999752 11
Q ss_pred eeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCC
Q 022019 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDP 288 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~ 288 (304)
...... ....|.+++.++ ++..+++.+.|..|++|+.........+. ...+|++++.|.||+++++.- .+.
T Consensus 347 ---~~W~gv---r~~~v~dlait~-Dgk~vl~v~~d~~i~l~~~e~~~dr~lis-e~~~its~~iS~d~k~~LvnL-~~q 417 (519)
T KOG0293|consen 347 ---GNWEGV---RDPKVHDLAITY-DGKYVLLVTVDKKIRLYNREARVDRGLIS-EEQPITSFSISKDGKLALVNL-QDQ 417 (519)
T ss_pred ---hccccc---ccceeEEEEEcC-CCcEEEEEecccceeeechhhhhhhcccc-ccCceeEEEEcCCCcEEEEEc-ccC
Confidence 122111 123488999999 66777778899999999988766555444 457899999999999998888 899
Q ss_pred eEEEEeccccee
Q 022019 289 YILCWDLRKAVQ 300 (304)
Q Consensus 289 ~i~vwd~~~~~~ 300 (304)
.+++||+...+.
T Consensus 418 ei~LWDl~e~~l 429 (519)
T KOG0293|consen 418 EIHLWDLEENKL 429 (519)
T ss_pred eeEEeecchhhH
Confidence 999999986543
No 92
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=4.6e-26 Score=183.46 Aligned_cols=219 Identities=15% Similarity=0.274 Sum_probs=162.8
Q ss_pred CCCcee---EEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 59 PNNFLK---GIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 59 h~~~V~---~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
|...|. .+..++ .++||+|||.||.|++|++....-..... .......|..-|.++..
T Consensus 20 n~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~-----------~~asme~HsDWVNDiiL------- 81 (735)
T KOG0308|consen 20 NRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTP-----------YIASMEHHSDWVNDIIL------- 81 (735)
T ss_pred ccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccc-----------hhhhhhhhHhHHhhHHh-------
Confidence 444555 455554 67789999999999999986432210000 01112223333444332
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCC--eeeEEeecccccccccceEEEEE-CCCCcEEEEE-cCCeEEEEEcCCCCc-cce
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTG--LLRCTYRAYDAVDEITAAFSVAF-NPTGTKIFAG-YNKSVRVFDVHRPGR-DFE 209 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~~~~~v~~i~~-~~~~~~l~~~-~d~~i~v~d~~~~~~-~~~ 209 (304)
..+++.|++++.|-+|++|+...+ -+..++..|.. .|.|+++ -++...+++| -|+.|.+||++.+.. ...
T Consensus 82 ~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~D-----YVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~ 156 (735)
T KOG0308|consen 82 CGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHKD-----YVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVA 156 (735)
T ss_pred hcCCCceEEecCCceEEEeecccCcchhHhhhhcccc-----hheeeeecccCceeEEecCCCccEEEEEccCcchhhhh
Confidence 457889999999999999999877 35555665554 8999999 6666777754 999999999987522 110
Q ss_pred eee--eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccC
Q 022019 210 KYS--TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKD 287 (304)
Q Consensus 210 ~~~--~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d 287 (304)
... +......++...|++++.++ .+.++++|+.++.+++||.++++.+..+.||...|..+..++||+.+++++ .|
T Consensus 157 s~n~~t~~sl~sG~k~siYSLA~N~-t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~s-SD 234 (735)
T KOG0308|consen 157 SFNNVTVNSLGSGPKDSIYSLAMNQ-TGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSAS-SD 234 (735)
T ss_pred hccccccccCCCCCccceeeeecCC-cceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecC-CC
Confidence 011 11111237888899999999 778999999999999999999999999999999999999999999999999 99
Q ss_pred CeEEEEecccceeee
Q 022019 288 PYILCWDLRKAVQVV 302 (304)
Q Consensus 288 ~~i~vwd~~~~~~~~ 302 (304)
|+|++||+...+++.
T Consensus 235 gtIrlWdLgqQrCl~ 249 (735)
T KOG0308|consen 235 GTIRLWDLGQQRCLA 249 (735)
T ss_pred ceEEeeeccccceee
Confidence 999999999887763
No 93
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.94 E-value=1.4e-24 Score=156.92 Aligned_cols=235 Identities=16% Similarity=0.172 Sum_probs=159.2
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccc----------
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSL---------- 103 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~---------- 103 (304)
.+..|++...+... -....+|.+.|-.++|+| ....|++++.|.+|++||+..++....+.....
T Consensus 43 tv~v~n~e~~r~~~----~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~eni~i~wsp~g 118 (313)
T KOG1407|consen 43 TVSVWNLERDRFRK----ELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETKGENINITWSPDG 118 (313)
T ss_pred ceEEEEecchhhhh----hhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeeccCcceEEEEcCCC
Confidence 44455555553222 125679999999999998 667999999999999999987765322221100
Q ss_pred ----cccCCccceEEEee---------cCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeeccccc
Q 022019 104 ----AKDQDSYEASLVVT---------EGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAV 170 (304)
Q Consensus 104 ----~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 170 (304)
..+.+.....+... ....+..++| +.++.+|+.....|+|.|.....-+++..+..|.
T Consensus 119 ~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w-------~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~-- 189 (313)
T KOG1407|consen 119 EYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISW-------NNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHP-- 189 (313)
T ss_pred CEEEEecCcccEEEEEecccceeehhcccceeeeeee-------cCCCCEEEEecCCceEEEEeccccccccccccCC--
Confidence 00000000000000 0011222222 3344445544445556665555555555555544
Q ss_pred ccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEE
Q 022019 171 DEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAI 249 (304)
Q Consensus 171 ~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i 249 (304)
..+.||.|+|+|+++|+| .|..+.+||+... .+... +..+.-+|+.+.|+- ++++||+||+|..|-|
T Consensus 190 ---snCicI~f~p~GryfA~GsADAlvSLWD~~EL----iC~R~----isRldwpVRTlSFS~-dg~~lASaSEDh~IDI 257 (313)
T KOG1407|consen 190 ---SNCICIEFDPDGRYFATGSADALVSLWDVDEL----ICERC----ISRLDWPVRTLSFSH-DGRMLASASEDHFIDI 257 (313)
T ss_pred ---cceEEEEECCCCceEeeccccceeeccChhHh----hhhee----eccccCceEEEEecc-CcceeeccCccceEEe
Confidence 388999999999999977 9999999999642 11122 245677899999999 8889999999999999
Q ss_pred EecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccC---------CeEEEEecc
Q 022019 250 YREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKD---------PYILCWDLR 296 (304)
Q Consensus 250 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d---------~~i~vwd~~ 296 (304)
-+.++|..+..++ +.++...++|+|...+||-++ +| |.+++|-+.
T Consensus 258 A~vetGd~~~eI~-~~~~t~tVAWHPk~~LLAyA~-ddk~~d~~reag~vKiFG~~ 311 (313)
T KOG1407|consen 258 AEVETGDRVWEIP-CEGPTFTVAWHPKRPLLAYAC-DDKDGDSNREAGTVKIFGLS 311 (313)
T ss_pred EecccCCeEEEee-ccCCceeEEecCCCceeeEEe-cCCCCccccccceeEEecCC
Confidence 9999999999998 788999999999999998777 33 567776554
No 94
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=3.5e-26 Score=187.52 Aligned_cols=202 Identities=17% Similarity=0.301 Sum_probs=157.5
Q ss_pred eeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEE
Q 022019 63 LKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF 141 (304)
Q Consensus 63 V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 141 (304)
+..++|.. +.++|||++..|.|.+||+.... ..........|...+.++.|++. ...+|
T Consensus 90 ~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~--------------rnk~l~~f~EH~Rs~~~ldfh~t------ep~il 149 (839)
T KOG0269|consen 90 AADVKWGQLYSNLIATCSTNGVISVWDLNKSI--------------RNKLLTVFNEHERSANKLDFHST------EPNIL 149 (839)
T ss_pred hhhcccccchhhhheeecCCCcEEEEecCccc--------------cchhhhHhhhhccceeeeeeccC------CccEE
Confidence 55688876 66799999999999999997421 11111244567789999999865 44589
Q ss_pred EEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCC-CcEEEEE-cCCeEEEEEcCCCCccceeeeeeecccc
Q 022019 142 ASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT-GTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKE 219 (304)
Q Consensus 142 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 219 (304)
++|++||.|++||++..+...++..... .|..+.|+|. +..++++ ..|.+.+||+|.+.+.. ..+.
T Consensus 150 iSGSQDg~vK~~DlR~~~S~~t~~~nSE-----SiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~-------~k~~ 217 (839)
T KOG0269|consen 150 ISGSQDGTVKCWDLRSKKSKSTFRSNSE-----SIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCE-------KKLT 217 (839)
T ss_pred EecCCCceEEEEeeecccccccccccch-----hhhceeeccCCCceEEEecCCceEEEeeccCchhHH-------HHhh
Confidence 9999999999999998887777766443 8999999995 5666666 88999999999864333 3337
Q ss_pred ccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce--EeEEeccccCCeEEEEECCCCcEE-EEee-ccCCeEEEEec
Q 022019 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVQFSRDGNYL-YTGG-RKDPYILCWDL 295 (304)
Q Consensus 220 ~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l-~~~~-~~d~~i~vwd~ 295 (304)
+|.++|.++.|+| ++.+||+|+.|+.|+|||..+.+ ++.++. ...+|..+.|-|..++. ++++ -.|-.|+|||+
T Consensus 218 AH~GpV~c~nwhP-nr~~lATGGRDK~vkiWd~t~~~~~~~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDv 295 (839)
T KOG0269|consen 218 AHNGPVLCLNWHP-NREWLATGGRDKMVKIWDMTDSRAKPKHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDV 295 (839)
T ss_pred cccCceEEEeecC-CCceeeecCCCccEEEEeccCCCccceeEEe-ecceeeeeeeccCccchhhhhhccccceEEEEee
Confidence 8999999999999 88899999999999999997654 444444 34689999999988764 4443 25778999999
Q ss_pred ccc
Q 022019 296 RKA 298 (304)
Q Consensus 296 ~~~ 298 (304)
+..
T Consensus 296 rRP 298 (839)
T KOG0269|consen 296 RRP 298 (839)
T ss_pred ccc
Confidence 864
No 95
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.94 E-value=4.3e-25 Score=167.21 Aligned_cols=226 Identities=17% Similarity=0.239 Sum_probs=160.9
Q ss_pred eecCCCCceeEEEEcCCC--CeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 55 TSSIPNNFLKGIKWSPDG--SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~--~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
..-+|.+.++.+.-++-+ .+.++-+..|.|.||++.............. ........-....|+..-+.++|+|.
T Consensus 146 ~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~-~~s~~~Pl~t~~ghk~EGy~LdWSp~-- 222 (440)
T KOG0302|consen 146 KSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEV-KDSEFRPLFTFNGHKGEGYGLDWSPI-- 222 (440)
T ss_pred cccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccc-cccccCceEEecccCccceeeecccc--
Confidence 345788899999988854 4677778899999999864322111111100 01122222344556778889999663
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCc-EEE-EEcCCeEEEEEcCCCCcccee
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT-KIF-AGYNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~-~~~d~~i~v~d~~~~~~~~~~ 210 (304)
....|++|.--+.|++|...++....--. ...+|...|..++|+|..+ .|+ ++.||+|+|||+|........
T Consensus 223 ----~~g~LlsGDc~~~I~lw~~~~g~W~vd~~--Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~ 296 (440)
T KOG0302|consen 223 ----KTGRLLSGDCVKGIHLWEPSTGSWKVDQR--PFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAV 296 (440)
T ss_pred ----cccccccCccccceEeeeeccCceeecCc--cccccccchhhhccCCccCceEEeeecCceEEEEEecCCCcccee
Confidence 12247788777889999998875432211 1223555899999999754 444 459999999999985332221
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC---ceEeEEeccccCCeEEEEECCCC-cEEEEeecc
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN---MELLYVLHGQEGGVTHVQFSRDG-NYLYTGGRK 286 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~ 286 (304)
. . .+|.+.|..+.|+.. -.+|++|+.||+++|||+++ ++++.+|+-|..+|+++.|+|.. ..|+++| .
T Consensus 297 ~-~-----kAh~sDVNVISWnr~-~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg-~ 368 (440)
T KOG0302|consen 297 S-T-----KAHNSDVNVISWNRR-EPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASG-E 368 (440)
T ss_pred E-e-----eccCCceeeEEccCC-cceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEecc-C
Confidence 1 1 678889999999994 44999999999999999985 46899999999999999999965 4566666 8
Q ss_pred CCeEEEEeccc
Q 022019 287 DPYILCWDLRK 297 (304)
Q Consensus 287 d~~i~vwd~~~ 297 (304)
|..|.+||+.-
T Consensus 369 D~QitiWDlsv 379 (440)
T KOG0302|consen 369 DNQITIWDLSV 379 (440)
T ss_pred CCcEEEEEeec
Confidence 99999999964
No 96
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.94 E-value=4.1e-25 Score=163.59 Aligned_cols=218 Identities=16% Similarity=0.210 Sum_probs=169.2
Q ss_pred cccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEE
Q 022019 46 TYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDF 125 (304)
Q Consensus 46 ~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 125 (304)
....+...+++-.|.+.|+++.|+|....|++|+.|++|++||+......... ..+....+|.++
T Consensus 158 ~qa~hPvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~---------------K~~qd~~~vrsi 222 (430)
T KOG0640|consen 158 TQARHPVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAF---------------KVFQDTEPVRSI 222 (430)
T ss_pred cccCCceEeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHH---------------HHhhccceeeeE
Confidence 33445567788899999999999999999999999999999998743221111 122334688888
Q ss_pred eecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCC
Q 022019 126 CWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRP 204 (304)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~ 204 (304)
.| +|.|.++++|.+-..+++||+.+-++...-. ....|...|+++.+++.+++.+++ .||.|++||--..
T Consensus 223 Sf-------HPsGefllvgTdHp~~rlYdv~T~Qcfvsan--Pd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~ 293 (430)
T KOG0640|consen 223 SF-------HPSGEFLLVGTDHPTLRLYDVNTYQCFVSAN--PDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSN 293 (430)
T ss_pred ee-------cCCCceEEEecCCCceeEEeccceeEeeecC--cccccccceeEEEecCCccEEEEeccCCcEEeeccccH
Confidence 77 6689999999999999999999887755444 223567799999999999999965 9999999997542
Q ss_pred Cccceeeeeeeccccccc-cceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec---------------------
Q 022019 205 GRDFEKYSTLKGNKEGQA-GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH--------------------- 262 (304)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------------------- 262 (304)
+ ++..+. .+|. ..|.+..|.. +++++++.+.|..+++|.+.+++++..+.
T Consensus 294 -r---Cv~t~~---~AH~gsevcSa~Ftk-n~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEd 365 (430)
T KOG0640|consen 294 -R---CVRTIG---NAHGGSEVCSAVFTK-NGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTED 365 (430)
T ss_pred -H---HHHHHH---hhcCCceeeeEEEcc-CCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccc
Confidence 2 222222 3333 4589999999 88899999999999999998876665432
Q ss_pred ----------------------------cccCCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 263 ----------------------------GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 263 ----------------------------~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
+|.+.+..+.-||.+.-+++++ .|-.+++|--+
T Consensus 366 yVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcs-dD~raRFWyrr 426 (430)
T KOG0640|consen 366 YVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCS-DDFRARFWYRR 426 (430)
T ss_pred eEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeec-ccceeeeeeec
Confidence 4677788888888888888888 88899998654
No 97
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=2.6e-25 Score=165.25 Aligned_cols=223 Identities=17% Similarity=0.214 Sum_probs=171.0
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccc------------cc----ccccc-----cc-CC-c
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYD------------VN----ACSLA-----KD-QD-S 109 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~------------~~----~~~~~-----~~-~~-~ 109 (304)
+..+.||.+.|++|+|++.+.++++++.|++..||...-+-.... .. ..... .+ +. .
T Consensus 183 L~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiR 262 (481)
T KOG0300|consen 183 LATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIR 262 (481)
T ss_pred eeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceee
Confidence 347889999999999999999999999999999997321100000 00 00000 00 00 1
Q ss_pred cceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE
Q 022019 110 YEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF 189 (304)
Q Consensus 110 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 189 (304)
....-+.+|...|.+..| -..|+.+++++.|.+..+||+++++.+..+.+|.. ..+.++-+|..++++
T Consensus 263 vPl~~ltgH~~vV~a~dW-------L~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~-----ELtHcstHptQrLVv 330 (481)
T KOG0300|consen 263 VPLMRLTGHRAVVSACDW-------LAGGQQMVTASWDRTANLWDVETGEVVNILTGHDS-----ELTHCSTHPTQRLVV 330 (481)
T ss_pred eeeeeeeccccceEehhh-------hcCcceeeeeeccccceeeeeccCceeccccCcch-----hccccccCCcceEEE
Confidence 111223456667777777 34788999999999999999999999999988876 788888999988888
Q ss_pred EE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce-EeEEeccccCC
Q 022019 190 AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME-LLYVLHGQEGG 267 (304)
Q Consensus 190 ~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~ 267 (304)
++ .|.+.++||++.. ......+.+|...|+++.|..++ .+++|+.|.+|++||+++.. ++.++. ..++
T Consensus 331 TsSrDtTFRLWDFRea-------I~sV~VFQGHtdtVTS~vF~~dd--~vVSgSDDrTvKvWdLrNMRsplATIR-tdS~ 400 (481)
T KOG0300|consen 331 TSSRDTTFRLWDFREA-------IQSVAVFQGHTDTVTSVVFNTDD--RVVSGSDDRTVKVWDLRNMRSPLATIR-TDSP 400 (481)
T ss_pred EeccCceeEeccchhh-------cceeeeecccccceeEEEEecCC--ceeecCCCceEEEeeeccccCcceeee-cCCc
Confidence 65 9999999999842 22333458999999999999733 68999999999999999865 778887 4678
Q ss_pred eEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 268 VTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 268 v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
++.++.+..++.|+.-- ++..|++||++..
T Consensus 401 ~NRvavs~g~~iIAiPh-DNRqvRlfDlnG~ 430 (481)
T KOG0300|consen 401 ANRVAVSKGHPIIAIPH-DNRQVRLFDLNGN 430 (481)
T ss_pred cceeEeecCCceEEecc-CCceEEEEecCCC
Confidence 99999998888999888 8899999999653
No 98
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=5.7e-24 Score=151.02 Aligned_cols=223 Identities=20% Similarity=0.312 Sum_probs=156.8
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
....|.+++|.|.|.+.+.|+..++++|-....-... ...+.....+......-...|...|++.+| +|+|
T Consensus 31 dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~--r~~hea~~~pp~v~~kr~khhkgsiyc~~w-------s~~g 101 (350)
T KOG0641|consen 31 DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDL--RHAHEAAKQPPSVLCKRNKHHKGSIYCTAW-------SPCG 101 (350)
T ss_pred chhheeeEEecCCCceEEeccCCceEEEEccccccCc--ccccccccCCCeEEeeeccccCccEEEEEe-------cCcc
Confidence 4567999999999999999999999998765321110 011111111122222334567789999999 8899
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeE-----Eeecccc------------------------------------------cc
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRC-----TYRAYDA------------------------------------------VD 171 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~-----~~~~~~~------------------------------------------~~ 171 (304)
+++++|+.|.+|++..++...+.. .+..|.. .+
T Consensus 102 eliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sg 181 (350)
T KOG0641|consen 102 ELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSG 181 (350)
T ss_pred CeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecC
Confidence 999999999999997665322111 1111111 01
Q ss_pred cccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccc---cccceeEEEeecCCCcEEEEEecCCeE
Q 022019 172 EITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEG---QAGIMSAIAFSPTHTGMLAIGSYSQTS 247 (304)
Q Consensus 172 ~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~p~~~~~l~~~~~dg~i 247 (304)
|...|.++ ++-++-.+++| .|.+|++||++.+. ....+...+.+ ....|.+++..| .+++|++|..|...
T Consensus 182 htghilal-yswn~~m~~sgsqdktirfwdlrv~~----~v~~l~~~~~~~glessavaav~vdp-sgrll~sg~~dssc 255 (350)
T KOG0641|consen 182 HTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNS----CVNTLDNDFHDGGLESSAVAAVAVDP-SGRLLASGHADSSC 255 (350)
T ss_pred CcccEEEE-EEecCcEEEccCCCceEEEEeeeccc----eeeeccCcccCCCcccceeEEEEECC-CcceeeeccCCCce
Confidence 12222222 12234566655 89999999998742 22222222221 236799999999 88999999999999
Q ss_pred EEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 248 AIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 248 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
.+||++.+++++.+..|...|.++.|+|.-.|+++++ .|..|++-|+..
T Consensus 256 ~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~s-yd~~ikltdlqg 304 (350)
T KOG0641|consen 256 MLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCS-YDMKIKLTDLQG 304 (350)
T ss_pred EEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEec-ccceEEEeeccc
Confidence 9999999999999999999999999999999999999 999999999854
No 99
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.94 E-value=5.7e-26 Score=171.15 Aligned_cols=210 Identities=19% Similarity=0.223 Sum_probs=153.2
Q ss_pred eecCCCCceeEEEEcCCC-CeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecC----
Q 022019 55 TSSIPNNFLKGIKWSPDG-SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP---- 129 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---- 129 (304)
.+.||.+.|.|++=+|.. ..+++|+.||.|+|||+.+......+..+ .+.|..+++.-
T Consensus 61 ~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH-----------------~G~V~Gi~v~~~~~~ 123 (433)
T KOG0268|consen 61 SLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAH-----------------EGLVRGICVTQTSFF 123 (433)
T ss_pred hccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecc-----------------cCceeeEEecccceE
Confidence 678999999999999966 78999999999999999876554333322 23333333310
Q ss_pred ---------------------------ccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEEC
Q 022019 130 ---------------------------HMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFN 182 (304)
Q Consensus 130 ---------------------------~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~ 182 (304)
..+.-+..+..+++++++ |.|||.....++..+..... .+.++.|+
T Consensus 124 tvgdDKtvK~wk~~~~p~~tilg~s~~~gIdh~~~~~~FaTcGe~--i~IWD~~R~~Pv~smswG~D-----ti~svkfN 196 (433)
T KOG0268|consen 124 TVGDDKTVKQWKIDGPPLHTILGKSVYLGIDHHRKNSVFATCGEQ--IDIWDEQRDNPVSSMSWGAD-----SISSVKFN 196 (433)
T ss_pred EecCCcceeeeeccCCcceeeeccccccccccccccccccccCce--eeecccccCCccceeecCCC-----ceeEEecC
Confidence 001111223345555443 56666655555555554433 78899999
Q ss_pred CCCcEEE-EE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce-EeE
Q 022019 183 PTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME-LLY 259 (304)
Q Consensus 183 ~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~-~~~ 259 (304)
|....|+ ++ .|+.|.+||++.....-+.... ..-..++|+| ....+++|++|..++.||++... ++.
T Consensus 197 pvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~---------mRTN~IswnP-eafnF~~a~ED~nlY~~DmR~l~~p~~ 266 (433)
T KOG0268|consen 197 PVETSILASCASDRSIVLYDLRQASPLKKVILT---------MRTNTICWNP-EAFNFVAANEDHNLYTYDMRNLSRPLN 266 (433)
T ss_pred CCcchheeeeccCCceEEEecccCCccceeeee---------ccccceecCc-cccceeeccccccceehhhhhhcccch
Confidence 9776555 44 9999999999985332222211 2246799999 88899999999999999999764 788
Q ss_pred EeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccce
Q 022019 260 VLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 260 ~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
...+|.+.|.++.|||.|+-+++|+ .|.+|+||.++.+.
T Consensus 267 v~~dhvsAV~dVdfsptG~Efvsgs-yDksIRIf~~~~~~ 305 (433)
T KOG0268|consen 267 VHKDHVSAVMDVDFSPTGQEFVSGS-YDKSIRIFPVNHGH 305 (433)
T ss_pred hhcccceeEEEeccCCCcchhcccc-ccceEEEeecCCCc
Confidence 8889999999999999999999999 99999999998764
No 100
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=1.3e-24 Score=168.68 Aligned_cols=203 Identities=15% Similarity=0.214 Sum_probs=161.6
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
-.++|.+++-+|+|.+|+.|+-.|.+.+|.+.++.+..... .|-.+|+++.| +.||
T Consensus 80 ~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~-----------------aHYQ~ITcL~f-------s~dg 135 (476)
T KOG0646|consen 80 LPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLS-----------------AHYQSITCLKF-------SDDG 135 (476)
T ss_pred cccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHH-----------------hhccceeEEEE-------eCCC
Confidence 35779999999999999988899999999999987765443 34488999987 8899
Q ss_pred cEEEEEeCCCCEEEEEcCC---------CeeeEEeecccccccccceEEEEECCC--CcEEE-EEcCCeEEEEEcCCCCc
Q 022019 139 CVFASTTRDHPIHLWDATT---------GLLRCTYRAYDAVDEITAAFSVAFNPT--GTKIF-AGYNKSVRVFDVHRPGR 206 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~~~~~~~~~~v~~i~~~~~--~~~l~-~~~d~~i~v~d~~~~~~ 206 (304)
.+|++|+.||.|.+|.+.+ -++...+..|. -+|+++...+. ..+++ ++.|.++++||+..+.
T Consensus 136 s~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~Ht-----lsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~- 209 (476)
T KOG0646|consen 136 SHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHT-----LSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGV- 209 (476)
T ss_pred cEEEecCCCccEEEEEEEeecccccCCCccceeeeccCc-----ceeEEEEecCCCccceEEEecCCceEEEEEeccce-
Confidence 9999999999999998742 23334444443 48999988764 34555 6699999999998741
Q ss_pred cceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc----------------eEeEEeccccC--Ce
Q 022019 207 DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM----------------ELLYVLHGQEG--GV 268 (304)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~----------------~~~~~~~~~~~--~v 268 (304)
.+.. ......+.+++.+| .+..+++|+.+|.|.+.++... ..+..+.||.+ .|
T Consensus 210 ---LLlt-----i~fp~si~av~lDp-ae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~I 280 (476)
T KOG0646|consen 210 ---LLLT-----ITFPSSIKAVALDP-AERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAI 280 (476)
T ss_pred ---eeEE-----EecCCcceeEEEcc-cccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcce
Confidence 1111 12345689999999 8889999999999999876432 34556778988 99
Q ss_pred EEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 269 THVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 269 ~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+|++.+-||..|++|+ .||.++|||+.+.+++
T Consensus 281 TcLais~DgtlLlSGd-~dg~VcvWdi~S~Q~i 312 (476)
T KOG0646|consen 281 TCLAISTDGTLLLSGD-EDGKVCVWDIYSKQCI 312 (476)
T ss_pred eEEEEecCccEEEeeC-CCCCEEEEecchHHHH
Confidence 9999999999999999 9999999999887654
No 101
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.94 E-value=7.2e-27 Score=173.99 Aligned_cols=164 Identities=18% Similarity=0.280 Sum_probs=139.9
Q ss_pred CccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccc---cccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCC
Q 022019 129 PHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDA---VDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRP 204 (304)
Q Consensus 129 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~ 204 (304)
+.+..|+|||++|++|+.||.|-+||..+|+....++.... .-...+|.|+.|+.|...+++| .||.|++|.++++
T Consensus 216 ~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG 295 (508)
T KOG0275|consen 216 VECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETG 295 (508)
T ss_pred hhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecc
Confidence 34455699999999999999999999999887655443221 1123489999999999999977 9999999999885
Q ss_pred CccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEee
Q 022019 205 GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
..+.....+|...|+++.|+. ++..+++++.|.+++|.-+++|+++..++||.+.|+.+.|++||.++++++
T Consensus 296 -------~ClRrFdrAHtkGvt~l~FSr-D~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaS 367 (508)
T KOG0275|consen 296 -------QCLRRFDRAHTKGVTCLSFSR-DNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISAS 367 (508)
T ss_pred -------hHHHHhhhhhccCeeEEEEcc-CcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEec
Confidence 222223357888999999999 666888999999999999999999999999999999999999999999999
Q ss_pred ccCCeEEEEecccceee
Q 022019 285 RKDPYILCWDLRKAVQV 301 (304)
Q Consensus 285 ~~d~~i~vwd~~~~~~~ 301 (304)
.||+|++|+..+++++
T Consensus 368 -sDgtvkvW~~KtteC~ 383 (508)
T KOG0275|consen 368 -SDGTVKVWHGKTTECL 383 (508)
T ss_pred -CCccEEEecCcchhhh
Confidence 9999999999998875
No 102
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.94 E-value=1.9e-24 Score=159.19 Aligned_cols=208 Identities=17% Similarity=0.291 Sum_probs=164.5
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
....|.++|.+++|+.||..+++|+.|+.+++||+.+++. .....|..+|..+.|.+.
T Consensus 67 a~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~------------------~~v~~Hd~pvkt~~wv~~---- 124 (347)
T KOG0647|consen 67 AQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQV------------------SQVAAHDAPVKTCHWVPG---- 124 (347)
T ss_pred hhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCCe------------------eeeeecccceeEEEEecC----
Confidence 4557999999999999999999999999999999986643 244567789999999653
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
+....|++|+.|++|+.||.+...++.++..+. .++++..- ..+++++ .++.|.+|+++.+...++....
T Consensus 125 -~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPe------RvYa~Dv~--~pm~vVata~r~i~vynL~n~~te~k~~~S 195 (347)
T KOG0647|consen 125 -MNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPE------RVYAADVL--YPMAVVATAERHIAVYNLENPPTEFKRIES 195 (347)
T ss_pred -CCcceeEecccccceeecccCCCCeeeeeeccc------eeeehhcc--CceeEEEecCCcEEEEEcCCCcchhhhhcC
Confidence 234589999999999999999999888888766 66776653 3466655 9999999999876544443322
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc--eEeEEeccccC---------CeEEEEECCCCcEEEE
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM--ELLYVLHGQEG---------GVTHVQFSRDGNYLYT 282 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~---------~v~~~~~~~~~~~l~~ 282 (304)
. ..-.+++++..+ +....+.|+-+|.+.|..+..+ +.-++|+.|.. .|++++|+|....|+|
T Consensus 196 p------Lk~Q~R~va~f~-d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvT 268 (347)
T KOG0647|consen 196 P------LKWQTRCVACFQ-DKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVT 268 (347)
T ss_pred c------ccceeeEEEEEe-cCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEE
Confidence 2 233478999888 5556699999999999988876 45566666763 5888999999999999
Q ss_pred eeccCCeEEEEecccceee
Q 022019 283 GGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 283 ~~~~d~~i~vwd~~~~~~~ 301 (304)
+| .||+..+||-....++
T Consensus 269 aG-sDGtf~FWDkdar~kL 286 (347)
T KOG0647|consen 269 AG-SDGTFSFWDKDARTKL 286 (347)
T ss_pred ec-CCceEEEecchhhhhh
Confidence 99 9999999998765444
No 103
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=6.6e-25 Score=170.37 Aligned_cols=235 Identities=17% Similarity=0.198 Sum_probs=178.0
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
+++.|.+..+..+. .+.+|-..|+|+.|+.||.+|+||+.||.|.+|.+.+-.- ............
T Consensus 104 ~lYlWelssG~LL~------v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~--------a~~~~~~~p~~~ 169 (476)
T KOG0646|consen 104 NLYLWELSSGILLN------VLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVS--------ADNDHSVKPLHI 169 (476)
T ss_pred cEEEEEeccccHHH------HHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecc--------cccCCCccceee
Confidence 67888889888777 5678999999999999999999999999999999753211 011112233345
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d 193 (304)
...|.-+|+++...+ .+....+++++.|.++++||+..+..+.++..+. .+.+++.+|.++.+++| .+
T Consensus 170 f~~HtlsITDl~ig~-----Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~------si~av~lDpae~~~yiGt~~ 238 (476)
T KOG0646|consen 170 FSDHTLSITDLQIGS-----GGTNARLYTASEDRTIKLWDLSLGVLLLTITFPS------SIKAVALDPAERVVYIGTEE 238 (476)
T ss_pred eccCcceeEEEEecC-----CCccceEEEecCCceEEEEEeccceeeEEEecCC------cceeEEEcccccEEEecCCc
Confidence 667778888887633 3345689999999999999999999988887766 88999999999999987 99
Q ss_pred CeEEEEEcCCCCcc--------ceeeeeeecccccccc--ceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecc
Q 022019 194 KSVRVFDVHRPGRD--------FEKYSTLKGNKEGQAG--IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG 263 (304)
Q Consensus 194 ~~i~v~d~~~~~~~--------~~~~~~~~~~~~~~~~--~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 263 (304)
|.|.+.++...... .....+-.....+|.+ .|+|++.+- ++.+|++|+.||.|.|||+.+.++++++..
T Consensus 239 G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~-DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~ 317 (476)
T KOG0646|consen 239 GKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAIST-DGTLLLSGDEDGKVCVWDIYSKQCIRTLQT 317 (476)
T ss_pred ceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEec-CccEEEeeCCCCCEEEEecchHHHHHHHhh
Confidence 99999988654311 1111222233466776 899999999 788999999999999999999999999886
Q ss_pred ccCCeEEEEECCCCcEEEEeeccCCeEEEEec
Q 022019 264 QEGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 264 ~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
..++|+.+.+.|--+-.+.+......+-.|++
T Consensus 318 ~kgpVtnL~i~~~~~~~~l~~~~~ps~~~~~l 349 (476)
T KOG0646|consen 318 SKGPVTNLQINPLERGIILFEHKQPSLPNPHL 349 (476)
T ss_pred hccccceeEeeccccceecccccCccCCchHh
Confidence 78899999997654433332213334444443
No 104
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=5e-24 Score=178.03 Aligned_cols=232 Identities=17% Similarity=0.278 Sum_probs=167.2
Q ss_pred CCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCC-Cccccc-cc-----------cccc-cCCccceEEEeecC---C
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENG-ISYDVN-AC-----------SLAK-DQDSYEASLVVTEG---E 120 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~-~~~~~~-~~-----------~~~~-~~~~~~~~~~~~~~---~ 120 (304)
+|+..-+.|+|.|+|.+|++++.||.|++|+..... ....+. .. .+.. .....+....+... .
T Consensus 11 aht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~~ 90 (933)
T KOG1274|consen 11 AHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEEDT 90 (933)
T ss_pred hccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecccceEEeeccceEEEeeCCCCCccc
Confidence 689999999999999999999999999999976552 211111 00 0000 00111111111111 1
Q ss_pred eEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEE
Q 022019 121 SVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVF 199 (304)
Q Consensus 121 ~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~ 199 (304)
-+..+....+.++++.+|+++|.|+.|-.|++-++.+......+..+.. +|.++.|+|.+++||++ .||.|++|
T Consensus 91 iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~a-----pVl~l~~~p~~~fLAvss~dG~v~iw 165 (933)
T KOG1274|consen 91 ILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDA-----PVLQLSYDPKGNFLAVSSCDGKVQIW 165 (933)
T ss_pred eeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCC-----ceeeeeEcCCCCEEEEEecCceEEEE
Confidence 1222333334456688999999999999999999999888888888776 99999999999999965 99999999
Q ss_pred EcCCCCccceeeeeeecccccc-ccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecc--ccCCeEEEEECCC
Q 022019 200 DVHRPGRDFEKYSTLKGNKEGQ-AGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG--QEGGVTHVQFSRD 276 (304)
Q Consensus 200 d~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~ 276 (304)
|+..... ...+..+....... ...+..++|+|+++ .+++.+.|+.|++|+..++.+...+.. +...+..+.|+|+
T Consensus 166 ~~~~~~~-~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g-~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPn 243 (933)
T KOG1274|consen 166 DLQDGIL-SKTLTGVDKDNEFILSRICTRLAWHPKGG-TLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPN 243 (933)
T ss_pred Ecccchh-hhhcccCCccccccccceeeeeeecCCCC-eEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCC
Confidence 9986321 11111111111112 45577899999555 566677789999999999999888863 3445999999999
Q ss_pred CcEEEEeeccCCeEEEEeccc
Q 022019 277 GNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 277 ~~~l~~~~~~d~~i~vwd~~~ 297 (304)
|+|||+++ .||.|.|||+.+
T Consensus 244 G~YiAAs~-~~g~I~vWnv~t 263 (933)
T KOG1274|consen 244 GKYIAAST-LDGQILVWNVDT 263 (933)
T ss_pred CcEEeeec-cCCcEEEEeccc
Confidence 99999999 999999999985
No 105
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=4.7e-25 Score=183.66 Aligned_cols=205 Identities=17% Similarity=0.266 Sum_probs=172.2
Q ss_pred ecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeC
Q 022019 56 SSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135 (304)
Q Consensus 56 ~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 135 (304)
+...+..|.+++|+|...+++++-..|.|++||.+-+.+... ...|.++|..+.| +
T Consensus 5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~r-----------------FdeHdGpVRgv~F-------H 60 (1202)
T KOG0292|consen 5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDR-----------------FDEHDGPVRGVDF-------H 60 (1202)
T ss_pred hhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhh-----------------hhccCCccceeee-------c
Confidence 445567899999999999999999999999999875544332 2346689999988 5
Q ss_pred CCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcCCeEEEEEcCCCCccceeeeee
Q 022019 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 136 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~~i~v~d~~~~~~~~~~~~~~ 214 (304)
|.+.+|++|++|-.|++|+..+.+++.++.+|.. .|..+.|++.-..|++ +.|.+|+||+..+ ...
T Consensus 61 ~~qplFVSGGDDykIkVWnYk~rrclftL~GHlD-----YVRt~~FHheyPWIlSASDDQTIrIWNwqs--------r~~ 127 (1202)
T KOG0292|consen 61 PTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLD-----YVRTVFFHHEYPWILSASDDQTIRIWNWQS--------RKC 127 (1202)
T ss_pred CCCCeEEecCCccEEEEEecccceehhhhccccc-----eeEEeeccCCCceEEEccCCCeEEEEeccC--------Cce
Confidence 5677999999999999999999999888887776 8999999999999995 5999999999987 233
Q ss_pred eccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce-----------------------------EeEEecccc
Q 022019 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME-----------------------------LLYVLHGQE 265 (304)
Q Consensus 215 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~-----------------------------~~~~~~~~~ 265 (304)
.....+|...|.|..|+| ...+++++|-|.+|++||+...+ ..+.+.||.
T Consensus 128 iavltGHnHYVMcAqFhp-tEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHD 206 (1202)
T KOG0292|consen 128 IAVLTGHNHYVMCAQFHP-TEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHD 206 (1202)
T ss_pred EEEEecCceEEEeeccCC-ccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccc
Confidence 333488999999999999 77899999999999999984210 123457899
Q ss_pred CCeEEEEECCCCcEEEEeeccCCeEEEEecccce
Q 022019 266 GGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 266 ~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
..|+-++|+|.-..|++|+ +|..|++|.+...+
T Consensus 207 RGVNwaAfhpTlpliVSG~-DDRqVKlWrmnetK 239 (1202)
T KOG0292|consen 207 RGVNWAAFHPTLPLIVSGA-DDRQVKLWRMNETK 239 (1202)
T ss_pred cccceEEecCCcceEEecC-CcceeeEEEecccc
Confidence 9999999999999999999 99999999987654
No 106
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=2.6e-25 Score=159.16 Aligned_cols=214 Identities=18% Similarity=0.270 Sum_probs=166.6
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.-..|++.|.++...--|++||||+.|++|+|+.+.++.. ......+.+|..+|..+.|..
T Consensus 6 idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~--------------s~ll~~L~Gh~GPVwqv~wah----- 66 (299)
T KOG1332|consen 6 IDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQ--------------SKLLAELTGHSGPVWKVAWAH----- 66 (299)
T ss_pred hhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCC--------------ceeeeEecCCCCCeeEEeecc-----
Confidence 4568999999999988999999999999999999885532 123335667889999999932
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCC--cEEEEE-cCCeEEEEEcCCCCccceee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG--TKIFAG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~--~~l~~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
-.-|.+|++++.||.|.||.-..++..+... ...|...|++++|.|.+ -.|+++ .||.|.|++.+..+.
T Consensus 67 Pk~G~iLAScsYDgkVIiWke~~g~w~k~~e---~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~----- 138 (299)
T KOG1332|consen 67 PKFGTILASCSYDGKVIIWKEENGRWTKAYE---HAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGG----- 138 (299)
T ss_pred cccCcEeeEeecCceEEEEecCCCchhhhhh---hhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCC-----
Confidence 2268899999999999999987774332221 12344589999999964 556655 999999999987421
Q ss_pred eeeeccccccccceeEEEeecCC--C-----------cEEEEEecCCeEEEEecCCce--EeEEeccccCCeEEEEECCC
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTH--T-----------GMLAIGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVQFSRD 276 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~--~-----------~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~ 276 (304)
.........|.-.+++++|.|.. + +.|++|+.|..|+||+..+++ ...++.+|.+.|+.++|.|.
T Consensus 139 w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~ 218 (299)
T KOG1332|consen 139 WTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPS 218 (299)
T ss_pred ccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccc
Confidence 12222236788889999999931 2 469999999999999988753 45568899999999999996
Q ss_pred C----cEEEEeeccCCeEEEEecc
Q 022019 277 G----NYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 277 ~----~~l~~~~~~d~~i~vwd~~ 296 (304)
- .+|++++ .||++.||-.+
T Consensus 219 ~gl~~s~iAS~S-qDg~viIwt~~ 241 (299)
T KOG1332|consen 219 VGLPKSTIASCS-QDGTVIIWTKD 241 (299)
T ss_pred cCCCceeeEEec-CCCcEEEEEec
Confidence 4 5799999 99999999876
No 107
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=2.1e-26 Score=187.52 Aligned_cols=209 Identities=18% Similarity=0.305 Sum_probs=178.6
Q ss_pred eeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 54 RTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 54 ~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
+....|...|.++..-..++.+++|+.|..+.+|.+...... .-+..|..+|.++.|
T Consensus 22 ~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i-----------------~S~~~hespIeSl~f------ 78 (825)
T KOG0267|consen 22 REFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAI-----------------TSLTGHESPIESLTF------ 78 (825)
T ss_pred hhhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchh-----------------heeeccCCcceeeec------
Confidence 345578899999998778899999999999999987632211 124567788988887
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeee
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~ 212 (304)
++...+|++|+.+|+|++||+..++.+.++.++.. .+.++.|+|-+.+.+.| .|+.+++||++..+
T Consensus 79 -~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~-----~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~G------- 145 (825)
T KOG0267|consen 79 -DTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLL-----NITSVDFHPYGEFFASGSTDTDLKIWDIRKKG------- 145 (825)
T ss_pred -CcchhhhcccccCCceeeeehhhhhhhhhhhcccc-----CcceeeeccceEEeccccccccceehhhhccC-------
Confidence 66788999999999999999999998888887765 88899999999999966 99999999998632
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
+.....+|...+..+.|+| ++.+++.|++|..++|||+..++.+..|+.|.+.+.++.|+|..-.+++|+ .|+++++
T Consensus 146 -c~~~~~s~~~vv~~l~lsP-~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs-~d~tv~f 222 (825)
T KOG0267|consen 146 -CSHTYKSHTRVVDVLRLSP-DGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGS-SDRTVRF 222 (825)
T ss_pred -ceeeecCCcceeEEEeecC-CCceeeccCCcceeeeecccccccccccccccccccccccCchhhhhccCC-CCceeee
Confidence 2222356888899999999 888999999999999999999999999999999999999999999999999 9999999
Q ss_pred Eecccceee
Q 022019 293 WDLRKAVQV 301 (304)
Q Consensus 293 wd~~~~~~~ 301 (304)
||+++.+.+
T Consensus 223 ~dletfe~I 231 (825)
T KOG0267|consen 223 WDLETFEVI 231 (825)
T ss_pred eccceeEEe
Confidence 999976554
No 108
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.93 E-value=1.7e-24 Score=167.76 Aligned_cols=201 Identities=13% Similarity=0.172 Sum_probs=165.1
Q ss_pred cCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCC
Q 022019 57 SIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP 136 (304)
Q Consensus 57 ~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 136 (304)
++|.+.|.+++.++||+|||+|+.|..|.||+..+.+.... ...|...|.+++|. .
T Consensus 199 ~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~-----------------~~ghr~~V~~L~fr-------~ 254 (479)
T KOG0299|consen 199 KGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKV-----------------FKGHRGAVSSLAFR-------K 254 (479)
T ss_pred ccccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhc-----------------ccccccceeeeeee-------c
Confidence 48999999999999999999999999999999987654332 34566889999884 3
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeee
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLK 215 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~ 215 (304)
....+++++.|++|++|++.....+.++-.|.. .|.+|....-++.+.+| .|+++++|++.... .
T Consensus 255 gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd-----~v~~IdaL~reR~vtVGgrDrT~rlwKi~ees---------q 320 (479)
T KOG0299|consen 255 GTSELYSASADRSVKVWSIDQLSYVETLYGHQD-----GVLGIDALSRERCVTVGGRDRTVRLWKIPEES---------Q 320 (479)
T ss_pred CccceeeeecCCceEEEehhHhHHHHHHhCCcc-----ceeeechhcccceEEeccccceeEEEeccccc---------e
Confidence 445799999999999999987777666665554 88899888878888877 99999999994321 1
Q ss_pred ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec-cc-----------cCCeEEEEECCCCcEEEEe
Q 022019 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH-GQ-----------EGGVTHVQFSRDGNYLYTG 283 (304)
Q Consensus 216 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~-----------~~~v~~~~~~~~~~~l~~~ 283 (304)
..+.++.+.+.|++|-. ...+++|+.||.|.+|++...+++++.. .| ..+|++++..|...++++|
T Consensus 321 lifrg~~~sidcv~~In--~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asG 398 (479)
T KOG0299|consen 321 LIFRGGEGSIDCVAFIN--DEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASG 398 (479)
T ss_pred eeeeCCCCCeeeEEEec--ccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEec
Confidence 11256677899999986 3478999999999999999999888764 22 1289999999999999999
Q ss_pred eccCCeEEEEecccc
Q 022019 284 GRKDPYILCWDLRKA 298 (304)
Q Consensus 284 ~~~d~~i~vwd~~~~ 298 (304)
+ .+|+|++|.+.++
T Consensus 399 S-~~G~vrLW~i~~g 412 (479)
T KOG0299|consen 399 S-WSGCVRLWKIEDG 412 (479)
T ss_pred C-CCCceEEEEecCC
Confidence 9 9999999999988
No 109
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.93 E-value=7.6e-24 Score=176.53 Aligned_cols=213 Identities=15% Similarity=0.294 Sum_probs=171.8
Q ss_pred eeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEE
Q 022019 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV 115 (304)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (304)
+..|+...+.... .+.+|.+.|.++... ..++++|+.|.+|++|++.++... .+.
T Consensus 273 ~rvWd~~sg~C~~------~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~~~l-----------------~l~ 327 (537)
T KOG0274|consen 273 ERVWDCSTGECTH------SLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNGACL-----------------NLL 327 (537)
T ss_pred EEeEecCCCcEEE------EecCCCceEEEEEcc--CceEeeccCCceEEEEeccCcceE-----------------EEe
Confidence 4455555555444 788999999999885 457888999999999999855432 133
Q ss_pred eecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcCC
Q 022019 116 VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNK 194 (304)
Q Consensus 116 ~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~ 194 (304)
.+|..+|.++.. ++.++++|+.|++|++||+.+++++.++..|.. .|+++.+.+. ..++. +.|+
T Consensus 328 ~~h~~~V~~v~~---------~~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~-----~V~sl~~~~~-~~~~Sgs~D~ 392 (537)
T KOG0274|consen 328 RGHTGPVNCVQL---------DEPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTG-----RVYSLIVDSE-NRLLSGSLDT 392 (537)
T ss_pred ccccccEEEEEe---------cCCEEEEEecCceEEEEEhhhceeeeeecCCcc-----eEEEEEecCc-ceEEeeeecc
Confidence 337789999977 577999999999999999999999999998776 9999988876 66665 5999
Q ss_pred eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecc-ccCCeEEEEE
Q 022019 195 SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG-QEGGVTHVQF 273 (304)
Q Consensus 195 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~ 273 (304)
+|++||++... .......+|...+..+.+. +.+|++++.|+.|++||...++++..+.+ |...|+.+++
T Consensus 393 ~IkvWdl~~~~-------~c~~tl~~h~~~v~~l~~~---~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~ 462 (537)
T KOG0274|consen 393 TIKVWDLRTKR-------KCIHTLQGHTSLVSSLLLR---DNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALAL 462 (537)
T ss_pred ceEeecCCchh-------hhhhhhcCCcccccccccc---cceeEeccccccEEEeecccCceeeeeccCCcccEEEeec
Confidence 99999998742 3333446777777666553 45899999999999999999999999998 6788999998
Q ss_pred CCCCcEEEEeeccCCeEEEEecccceee
Q 022019 274 SRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 274 ~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
. ...+++++ .||.+.+||+++++.+
T Consensus 463 ~--~~~il~s~-~~~~~~l~dl~~~~~~ 487 (537)
T KOG0274|consen 463 G--KEEILCSS-DDGSVKLWDLRSGTLI 487 (537)
T ss_pred C--cceEEEEe-cCCeeEEEecccCchh
Confidence 6 45677788 8999999999998754
No 110
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.93 E-value=3.9e-24 Score=165.84 Aligned_cols=225 Identities=17% Similarity=0.283 Sum_probs=175.1
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccc-cccccccc-cCCccceEEEeecCCeEEEEeecCc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYD-VNACSLAK-DQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
+.....|.-+|.+++++|++++.++++.||+|.=|++.++..... ........ ........- ..|...+.+++.
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r-~~h~keil~~av--- 210 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESR-KGHVKEILTLAV--- 210 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCccc-ccccceeEEEEE---
Confidence 446778999999999999999999999999999999988774411 11110000 000000000 245566666654
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCCccce
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~ 209 (304)
++||++|++|+.|..|.||+.++.+.+..+..|.. .|.+++|-.....++ ++.|+.|++|++..
T Consensus 211 ----S~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~-----~V~~L~fr~gt~~lys~s~Drsvkvw~~~~------ 275 (479)
T KOG0299|consen 211 ----SSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRG-----AVSSLAFRKGTSELYSASADRSVKVWSIDQ------ 275 (479)
T ss_pred ----cCCCcEEEecCCCceEEEecCcccchhhccccccc-----ceeeeeeecCccceeeeecCCceEEEehhH------
Confidence 89999999999999999999999999988887776 999999987666666 66999999999976
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCe
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPY 289 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~ 289 (304)
........+|.+.|.++.-.. -++.+.+|+.|+++++|++.. +....+.+|.+.+-+++|-. ...+++|+ ++|.
T Consensus 276 --~s~vetlyGHqd~v~~IdaL~-reR~vtVGgrDrT~rlwKi~e-esqlifrg~~~sidcv~~In-~~HfvsGS-dnG~ 349 (479)
T KOG0299|consen 276 --LSYVETLYGHQDGVLGIDALS-RERCVTVGGRDRTVRLWKIPE-ESQLIFRGGEGSIDCVAFIN-DEHFVSGS-DNGS 349 (479)
T ss_pred --hHHHHHHhCCccceeeechhc-ccceEEeccccceeEEEeccc-cceeeeeCCCCCeeeEEEec-ccceeecc-CCce
Confidence 334445588999999998877 677777788999999999943 44456778899999999974 45789999 9999
Q ss_pred EEEEecccceeee
Q 022019 290 ILCWDLRKAVQVV 302 (304)
Q Consensus 290 i~vwd~~~~~~~~ 302 (304)
|.+|++.+.+.++
T Consensus 350 IaLWs~~KKkplf 362 (479)
T KOG0299|consen 350 IALWSLLKKKPLF 362 (479)
T ss_pred EEEeeecccCcee
Confidence 9999999887764
No 111
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=1.1e-24 Score=178.90 Aligned_cols=225 Identities=15% Similarity=0.222 Sum_probs=169.2
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (304)
.+..||+.....- +.+..+..|...|++++|++ ...+|++|+.||+|++||++...-..
T Consensus 111 ~i~vWdlnk~~rn---k~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~----------------- 170 (839)
T KOG0269|consen 111 VISVWDLNKSIRN---KLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKS----------------- 170 (839)
T ss_pred cEEEEecCccccc---hhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccc-----------------
Confidence 3445665542111 22346788999999999998 66789999999999999998553322
Q ss_pred EEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCC-eeeEEeecccccccccceEEEEECCCCcEEEEE-
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTG-LLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG- 191 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~- 191 (304)
........|.++.|.|. .+..|+++.+.|.+.+||++.. ++...+..|.+ +|.++.|+|++.+||+|
T Consensus 171 t~~~nSESiRDV~fsp~------~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~G-----pV~c~nwhPnr~~lATGG 239 (839)
T KOG0269|consen 171 TFRSNSESIRDVKFSPG------YGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNG-----PVLCLNWHPNREWLATGG 239 (839)
T ss_pred cccccchhhhceeeccC------CCceEEEecCCceEEEeeccCchhHHHHhhcccC-----ceEEEeecCCCceeeecC
Confidence 22334578999999886 4778999999999999999864 34444555544 99999999999999966
Q ss_pred cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEec--CCeEEEEecCCce-EeEEeccccCCe
Q 022019 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY--SQTSAIYREDNME-LLYVLHGQEGGV 268 (304)
Q Consensus 192 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~--dg~i~i~d~~~~~-~~~~~~~~~~~v 268 (304)
.|+.|+|||+..+.. ....++ ....++..++|-|.....|++++. |-.|+|||++..- |-.++..|...+
T Consensus 240 RDK~vkiWd~t~~~~--~~~~tI-----nTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~v 312 (839)
T KOG0269|consen 240 RDKMVKIWDMTDSRA--KPKHTI-----NTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSV 312 (839)
T ss_pred CCccEEEEeccCCCc--cceeEE-----eecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccc
Confidence 999999999975321 111221 234569999999988888888875 6789999997654 677888999999
Q ss_pred EEEEECC-CCcEEEEeeccCCeEEEEecccc
Q 022019 269 THVQFSR-DGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 269 ~~~~~~~-~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
+.++|.. |-..|.+++ .||+|..-.++++
T Consensus 313 t~i~W~~~d~~~l~s~s-KD~tv~qh~~kna 342 (839)
T KOG0269|consen 313 TGIAWDSGDRINLWSCS-KDGTVLQHLFKNA 342 (839)
T ss_pred cceeccCCCceeeEeec-CccHHHHhhhhcc
Confidence 9999965 445688888 9998876555443
No 112
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.92 E-value=1.6e-23 Score=178.07 Aligned_cols=217 Identities=18% Similarity=0.278 Sum_probs=164.3
Q ss_pred CCCCceeEEEEcCCCCeEEEec--CCCeEEEeeCCCCCCccccccccccccC-CccceEEEeecCCeEEEEeecCcccee
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSS--EDKTLRIFSLPENGISYDVNACSLAKDQ-DSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~--~dg~v~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+...|.+|+.+|+|..++||+ .||.++||+.+.-...... ... ..........|...|.++.|
T Consensus 11 H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~------~~~~l~k~l~~m~~h~~sv~CVR~------- 77 (942)
T KOG0973|consen 11 HNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEE------KNENLPKHLCTMDDHDGSVNCVRF------- 77 (942)
T ss_pred cCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhh------hhcccchhheeeccccCceeEEEE-------
Confidence 3456799999999999999999 8999999997532110000 001 12334456678899999998
Q ss_pred CCCccEEEEEeCCCCEEEEEcCC-------C-----------eeeEEeecccccccccceEEEEECCCCcEEEE-EcCCe
Q 022019 135 DPTSCVFASTTRDHPIHLWDATT-------G-----------LLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNKS 195 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~-------~-----------~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~~ 195 (304)
+|||++||+|++|+.|.+|.... + +....+..| ...|..+.|+|++.++++ |.|++
T Consensus 78 S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H-----~~DV~Dv~Wsp~~~~lvS~s~Dns 152 (942)
T KOG0973|consen 78 SPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGH-----DSDVLDVNWSPDDSLLVSVSLDNS 152 (942)
T ss_pred CCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecC-----CCccceeccCCCccEEEEecccce
Confidence 88999999999999999999772 0 133344444 449999999999999995 59999
Q ss_pred EEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceE------------------
Q 022019 196 VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL------------------ 257 (304)
Q Consensus 196 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~------------------ 257 (304)
|.+|+.++. .......+|.+.|..+.|+| -+++|++-+.|++|+||++.+...
T Consensus 153 Viiwn~~tF--------~~~~vl~~H~s~VKGvs~DP-~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~ 223 (942)
T KOG0973|consen 153 VIIWNAKTF--------ELLKVLRGHQSLVKGVSWDP-IGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFL 223 (942)
T ss_pred EEEEccccc--------eeeeeeecccccccceEECC-ccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceee
Confidence 999999763 33333488999999999999 888999999999999998644211
Q ss_pred ----------------------------------eEEeccccCCeEEEEECCC--------C-----c----EEEEeecc
Q 022019 258 ----------------------------------LYVLHGQEGGVTHVQFSRD--------G-----N----YLYTGGRK 286 (304)
Q Consensus 258 ----------------------------------~~~~~~~~~~v~~~~~~~~--------~-----~----~l~~~~~~ 286 (304)
-..|-||..++.++.|+|. | . .+|+|+ .
T Consensus 224 RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgS-q 302 (942)
T KOG0973|consen 224 RLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGS-Q 302 (942)
T ss_pred ecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEec-C
Confidence 1224578889999999872 1 1 466677 9
Q ss_pred CCeEEEEecccceeee
Q 022019 287 DPYILCWDLRKAVQVV 302 (304)
Q Consensus 287 d~~i~vwd~~~~~~~~ 302 (304)
|++|.||.....+.++
T Consensus 303 DrSlSVW~T~~~RPl~ 318 (942)
T KOG0973|consen 303 DRSLSVWNTALPRPLF 318 (942)
T ss_pred CccEEEEecCCCCchh
Confidence 9999999997776654
No 113
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=4e-23 Score=152.71 Aligned_cols=222 Identities=19% Similarity=0.340 Sum_probs=158.5
Q ss_pred cCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccc------cccccc-------cCCc---------cceEE
Q 022019 57 SIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVN------ACSLAK-------DQDS---------YEASL 114 (304)
Q Consensus 57 ~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~------~~~~~~-------~~~~---------~~~~~ 114 (304)
....+.|++|.|+|.++.|+.+++||++++||+....+..... .+.+.. .-+. .....
T Consensus 10 npP~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~~ 89 (323)
T KOG1036|consen 10 NPPEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNEDQ 89 (323)
T ss_pred CCChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccCCceEEEeccCceEEEEEecCCccee
Confidence 3567889999999988888889999999999998764422211 111111 1111 11123
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcC
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYN 193 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d 193 (304)
...|...+.++.+ .+....+++|+.|++|++||.+.......+.... .|.++... +..|++ +.+
T Consensus 90 igth~~~i~ci~~-------~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~k------kVy~~~v~--g~~LvVg~~~ 154 (323)
T KOG1036|consen 90 IGTHDEGIRCIEY-------SYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGK------KVYCMDVS--GNRLVVGTSD 154 (323)
T ss_pred eccCCCceEEEEe-------eccCCeEEEcccCccEEEEeccccccccccccCc------eEEEEecc--CCEEEEeecC
Confidence 3456667777777 4456679999999999999998754444443322 78888765 556665 599
Q ss_pred CeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc----eEeEEeccccC---
Q 022019 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM----ELLYVLHGQEG--- 266 (304)
Q Consensus 194 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~--- 266 (304)
..|.+||++.....+. .........++++++-| ++.=+++++-||.|.+=.++.. +.-..|+.|..
T Consensus 155 r~v~iyDLRn~~~~~q------~reS~lkyqtR~v~~~p-n~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~ 227 (323)
T KOG1036|consen 155 RKVLIYDLRNLDEPFQ------RRESSLKYQTRCVALVP-NGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEK 227 (323)
T ss_pred ceEEEEEcccccchhh------hccccceeEEEEEEEec-CCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccC
Confidence 9999999997543331 11133455689999999 6667888999999887655544 34556666643
Q ss_pred ------CeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 267 ------GVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 267 ------~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+|++++|+|-...|+||| .||.|.+||+.+.+.+
T Consensus 228 ~~~~~yPVNai~Fhp~~~tfaTgG-sDG~V~~Wd~~~rKrl 267 (323)
T KOG1036|consen 228 DTEIIYPVNAIAFHPIHGTFATGG-SDGIVNIWDLFNRKRL 267 (323)
T ss_pred CceEEEEeceeEeccccceEEecC-CCceEEEccCcchhhh
Confidence 799999999999999999 9999999999988765
No 114
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.92 E-value=6.9e-24 Score=164.43 Aligned_cols=215 Identities=15% Similarity=0.211 Sum_probs=165.4
Q ss_pred eeeeecCCCCceeEEEEcCCC--CeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecC
Q 022019 52 QFRTSSIPNNFLKGIKWSPDG--SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP 129 (304)
Q Consensus 52 ~~~~~~~h~~~V~~i~~s~~~--~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 129 (304)
.....+.|.++|++++|+|.. +.+|+|..-|.|-+||+.+.+. +.....+...|..+|.++.|.|
T Consensus 178 ~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~-------------d~d~v~~f~~hs~~Vs~l~F~P 244 (498)
T KOG4328|consen 178 ILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEK-------------DKDGVYLFTPHSGPVSGLKFSP 244 (498)
T ss_pred ecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCC-------------ccCceEEeccCCccccceEecC
Confidence 334667889999999999943 5788899999999999963321 2222235567788999999977
Q ss_pred ccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcCCeEEEEEcCCCCccc
Q 022019 130 HMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDF 208 (304)
Q Consensus 130 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~~i~v~d~~~~~~~~ 208 (304)
. +-..+++.+.||+|++-|++.+.....+.... ....+.++.|+.+...++. ..=|...+||+++++...
T Consensus 245 ~------n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~---d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~ 315 (498)
T KOG4328|consen 245 A------NTSQIYSSSYDGTIRLQDFEGNISEEVLSLDT---DNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEY 315 (498)
T ss_pred C------ChhheeeeccCceeeeeeecchhhHHHhhcCc---cceeeeeccccCCCccEEEeecccceEEEEeecCCccc
Confidence 6 44579999999999999998765443333311 1126778899887766664 466799999999976544
Q ss_pred eeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce----EeEEeccccCCeEEEEECCCCcEEEEee
Q 022019 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME----LLYVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
..+ .-|...|++++++|....+|++++.|++.+|||++... ++...-.|...|.++.|||+|..|+|.+
T Consensus 316 ~~~-------~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~ 388 (498)
T KOG4328|consen 316 ENL-------RLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTC 388 (498)
T ss_pred hhh-------hhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeec
Confidence 333 34556799999999889999999999999999998643 2233346999999999999998899999
Q ss_pred ccCCeEEEEecc
Q 022019 285 RKDPYILCWDLR 296 (304)
Q Consensus 285 ~~d~~i~vwd~~ 296 (304)
.|..|+|||..
T Consensus 389 -~D~~IRv~dss 399 (498)
T KOG4328|consen 389 -QDNEIRVFDSS 399 (498)
T ss_pred -cCCceEEeecc
Confidence 99999999984
No 115
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=3.8e-25 Score=180.27 Aligned_cols=192 Identities=18% Similarity=0.341 Sum_probs=163.9
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+.+|..+|.++.|+++..+|++|+.+|+|++||+.+.+.... +..|...+..+.|
T Consensus 65 S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrt-----------------Ltgh~~~~~sv~f------- 120 (825)
T KOG0267|consen 65 SLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRT-----------------LTGHLLNITSVDF------- 120 (825)
T ss_pred eeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhh-----------------hhccccCcceeee-------
Confidence 4789999999999999999999999999999999986654332 2334456666666
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
+|-+.++++|+.|..+.+||.+..-+...+..+.. .|..+.|+|+|++++.+ .|..++|||+.. ..
T Consensus 121 ~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~-----vv~~l~lsP~Gr~v~~g~ed~tvki~d~~a--------gk 187 (825)
T KOG0267|consen 121 HPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTR-----VVDVLRLSPDGRWVASGGEDNTVKIWDLTA--------GK 187 (825)
T ss_pred ccceEEeccccccccceehhhhccCceeeecCCcc-----eeEEEeecCCCceeeccCCcceeeeecccc--------cc
Confidence 66788999999999999999997777777776543 78899999999999966 789999999976 34
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEee
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
+...+..|.+.+.++.|+| ...+++.|+.|+++++||+++.+.+.........|.+..|+|++..+++|.
T Consensus 188 ~~~ef~~~e~~v~sle~hp-~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~~~~~~~G~ 257 (825)
T KOG0267|consen 188 LSKEFKSHEGKVQSLEFHP-LEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFNPDGKIVLSGE 257 (825)
T ss_pred cccccccccccccccccCc-hhhhhccCCCCceeeeeccceeEEeeccCCccCCceeeeecCCceeeecCc
Confidence 4444577889999999999 788999999999999999999999988888888999999999999988876
No 116
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=6.9e-24 Score=163.82 Aligned_cols=255 Identities=14% Similarity=0.262 Sum_probs=177.3
Q ss_pred hhhcHHhhccccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcC-------CCCeEEEecCCCeEEEeeCCC
Q 022019 19 TEVTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP-------DGSSFLTSSEDKTLRIFSLPE 91 (304)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~-------~~~~l~s~~~dg~v~vwd~~~ 91 (304)
..++..+..........++.++......|..+.. .+ ...-.|++|.. .|+|+|.|+.|..|-|||+.-
T Consensus 137 DnlIl~ar~eddvs~LEvYVyn~~e~nlYvHHD~--il---pafPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI 211 (463)
T KOG0270|consen 137 DNLILCARNEDDVSYLEVYVYNEEEENLYVHHDF--IL---PAFPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDI 211 (463)
T ss_pred CcEEEEeeccCCceEEEEEEEcCCCcceeEecce--ec---cCcchhhhhhhcCCCCCCCcceEEEeccCceeEEecccc
Confidence 3344444555555555677777665444432111 11 12235666642 367999999999999999873
Q ss_pred CCCccccccccccccC----CccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecc
Q 022019 92 NGISYDVNACSLAKDQ----DSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAY 167 (304)
Q Consensus 92 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 167 (304)
...............+ .........+|...|..+.|+-. ..+.||+|+.|.+|++||+.++++..++..+
T Consensus 212 ~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~------~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~ 285 (463)
T KOG0270|consen 212 VDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRN------FRNVLASGSADKTVKLWDVDTGKPKSSITHH 285 (463)
T ss_pred ccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccc------cceeEEecCCCceEEEEEcCCCCcceehhhc
Confidence 3221111111100000 00111122346666777777432 3468999999999999999999999999876
Q ss_pred cccccccceEEEEECCCC-cEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCC
Q 022019 168 DAVDEITAAFSVAFNPTG-TKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ 245 (304)
Q Consensus 168 ~~~~~~~~v~~i~~~~~~-~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg 245 (304)
.. .|.++.|+|.. .+|++| .|++|.+.|.|..+.....+. ..+.|..++|+|.....+++++.||
T Consensus 286 ~k-----~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk--------~~g~VEkv~w~~~se~~f~~~tddG 352 (463)
T KOG0270|consen 286 GK-----KVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWK--------FDGEVEKVAWDPHSENSFFVSTDDG 352 (463)
T ss_pred CC-----ceeEEEecCCCceEEEeccccceEEeeeccCccccCceEE--------eccceEEEEecCCCceeEEEecCCc
Confidence 65 99999999965 555566 999999999996433333222 2355889999998888999999999
Q ss_pred eEEEEecCCc-eEeEEeccccCCeEEEEECCCCc-EEEEeeccCCeEEEEecccc
Q 022019 246 TSAIYREDNM-ELLYVLHGQEGGVTHVQFSRDGN-YLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 246 ~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~d~~i~vwd~~~~ 298 (304)
+|+-+|+|+. +++.+++.|.++|.++++++.-+ +|++++ .|+.|++|++...
T Consensus 353 ~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s-~d~~Vklw~~~~~ 406 (463)
T KOG0270|consen 353 TVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTAS-TDKVVKLWKFDVD 406 (463)
T ss_pred eEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeecc-ccceEEEEeecCC
Confidence 9999999975 89999999999999999988765 466666 9999999998653
No 117
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.92 E-value=3.3e-23 Score=168.32 Aligned_cols=197 Identities=17% Similarity=0.294 Sum_probs=161.0
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
+..+++|...|+|+....++. +++||.|.++++|....... ...+|...|+.+...|
T Consensus 94 ~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~~l~~-------------------~l~gH~asVWAv~~l~--- 150 (745)
T KOG0301|consen 94 LYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIGELVY-------------------SLQGHTASVWAVASLP--- 150 (745)
T ss_pred hhhhhccccceeeeecCCcCc-eEecccccceEEecchhhhc-------------------ccCCcchheeeeeecC---
Confidence 448899999999999988887 99999999999997653221 2456778888887644
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeee
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~ 212 (304)
++ .+++|+.|.+|++|.- ++...++..|.. .|.++++-+++.++.++.||.|++|++.. ..+
T Consensus 151 ----e~-~~vTgsaDKtIklWk~--~~~l~tf~gHtD-----~VRgL~vl~~~~flScsNDg~Ir~w~~~g--e~l---- 212 (745)
T KOG0301|consen 151 ----EN-TYVTGSADKTIKLWKG--GTLLKTFSGHTD-----CVRGLAVLDDSHFLSCSNDGSIRLWDLDG--EVL---- 212 (745)
T ss_pred ----CC-cEEeccCcceeeeccC--Cchhhhhccchh-----heeeeEEecCCCeEeecCCceEEEEeccC--cee----
Confidence 33 8999999999999974 777888887765 99999999998999899999999999943 111
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
....+|...++++...+ +...++++++|++++||+.. ++.+.+.-....|+++.+-++|. |++|+ .||.|+|
T Consensus 213 ---~~~~ghtn~vYsis~~~-~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgD-Ivvg~-SDG~VrV 284 (745)
T KOG0301|consen 213 ---LEMHGHTNFVYSISMAL-SDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGD-IVVGG-SDGRVRV 284 (745)
T ss_pred ---eeeeccceEEEEEEecC-CCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCC-EEEec-cCceEEE
Confidence 22278999999999777 56699999999999999976 77777775556899999998988 66677 7999999
Q ss_pred Eecccc
Q 022019 293 WDLRKA 298 (304)
Q Consensus 293 wd~~~~ 298 (304)
|-.+..
T Consensus 285 fT~~k~ 290 (745)
T KOG0301|consen 285 FTVDKD 290 (745)
T ss_pred EEeccc
Confidence 988643
No 118
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=2.2e-23 Score=161.07 Aligned_cols=209 Identities=18% Similarity=0.303 Sum_probs=159.9
Q ss_pred ecCCCCceeEEEEcCC-CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 56 SSIPNNFLKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 56 ~~~h~~~V~~i~~s~~-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
..+|++.|..+.|+.. .+.||+||.|.+|++||+.+++... ....|+..|.++.|+|.
T Consensus 239 ~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~-----------------s~~~~~k~Vq~l~wh~~---- 297 (463)
T KOG0270|consen 239 ASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKS-----------------SITHHGKKVQTLEWHPY---- 297 (463)
T ss_pred cccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcce-----------------ehhhcCCceeEEEecCC----
Confidence 4579999999999985 4589999999999999999765422 33457799999999876
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCC-eeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTG-LLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
....|++|+.|++|.+.|++.. ..-..++..+ .|..++|+|.....+ ++ .||+++-+|+|..+.+...
T Consensus 298 --~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g------~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt- 368 (463)
T KOG0270|consen 298 --EPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDG------EVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWT- 368 (463)
T ss_pred --CceEEEeccccceEEeeeccCccccCceEEecc------ceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeE-
Confidence 5568999999999999999942 2223344433 788999999765544 66 9999999999987643322
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec--cccCCeEEEEECCCCcE-EEEeeccCC
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH--GQEGGVTHVQFSRDGNY-LYTGGRKDP 288 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~-l~~~~~~d~ 288 (304)
..+|.++|.++++++....++++++.|+.|++|++....+-.... -.-+...|.++.|+-.+ ++.|| ..+
T Consensus 369 ------~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG-~k~ 441 (463)
T KOG0270|consen 369 ------LKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGG-EKA 441 (463)
T ss_pred ------EEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecccCCCcceEEEecC-ccc
Confidence 278999999999999888899999999999999987544322111 11234677888887765 55566 788
Q ss_pred eEEEEecccceee
Q 022019 289 YILCWDLRKAVQV 301 (304)
Q Consensus 289 ~i~vwd~~~~~~~ 301 (304)
.++|||+.+...+
T Consensus 442 ~~~vwd~~~~~~V 454 (463)
T KOG0270|consen 442 VLRVWDIFTNSPV 454 (463)
T ss_pred eEEEeecccChhH
Confidence 9999999876543
No 119
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.91 E-value=1.9e-23 Score=158.34 Aligned_cols=216 Identities=16% Similarity=0.246 Sum_probs=159.6
Q ss_pred ccceeeeecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEee
Q 022019 49 FYNQFRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCW 127 (304)
Q Consensus 49 ~~~~~~~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 127 (304)
..+++.++.+|.+.=.+|+||| ....|+||.--+.|++|...++....... -...|...|-+++|
T Consensus 200 ~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~--------------Pf~gH~~SVEDLqW 265 (440)
T KOG0302|consen 200 EFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQR--------------PFTGHTKSVEDLQW 265 (440)
T ss_pred ccCceEEecccCccceeeecccccccccccCccccceEeeeeccCceeecCc--------------cccccccchhhhcc
Confidence 3467778999999999999999 33368888888899999988765432211 23347789999999
Q ss_pred cCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCc
Q 022019 128 FPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGR 206 (304)
Q Consensus 128 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~ 206 (304)
+|+ ....|++|+-||+|+|||++.+.....+.. ..|...|+.|.|+....+|++| .||+++|||+|.-..
T Consensus 266 Spt------E~~vfaScS~DgsIrIWDiRs~~~~~~~~~---kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~ 336 (440)
T KOG0302|consen 266 SPT------EDGVFASCSCDGSIRIWDIRSGPKKAAVST---KAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKS 336 (440)
T ss_pred CCc------cCceEEeeecCceEEEEEecCCCccceeEe---eccCCceeeEEccCCcceeeecCCCceEEEEEhhhccC
Confidence 775 456899999999999999998843332222 1233489999999988888876 999999999987422
Q ss_pred cceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce----------------EeEEeccc--cCCe
Q 022019 207 DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME----------------LLYVLHGQ--EGGV 268 (304)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~----------------~~~~~~~~--~~~v 268 (304)
..+...+.-|..+|+++.|+|.....|++++.|..|.|||+.... +.+.+-.| ...+
T Consensus 337 -----~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~ 411 (440)
T KOG0302|consen 337 -----GQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEV 411 (440)
T ss_pred -----CCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHh
Confidence 233334477899999999999888899999999999999985211 11122234 3468
Q ss_pred EEEEECCCC-cEEEEeeccCCeEEEEe
Q 022019 269 THVQFSRDG-NYLYTGGRKDPYILCWD 294 (304)
Q Consensus 269 ~~~~~~~~~-~~l~~~~~~d~~i~vwd 294 (304)
..+.|++.- .+|++.+ .|| +.||.
T Consensus 412 KevhWH~QiPG~lvsTa-~dG-fnVfk 436 (440)
T KOG0302|consen 412 KEVHWHRQIPGLLVSTA-IDG-FNVFK 436 (440)
T ss_pred hhheeccCCCCeEEEec-ccc-eeEEE
Confidence 889999864 3566666 788 44553
No 120
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.91 E-value=3.1e-23 Score=166.02 Aligned_cols=239 Identities=17% Similarity=0.288 Sum_probs=166.4
Q ss_pred cCCCccccccc--ceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcccccc-----------------
Q 022019 40 DVPPHRTYHFY--NQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNA----------------- 100 (304)
Q Consensus 40 ~~~~~~~~~~~--~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~----------------- 100 (304)
+++....+.++ .....+.||.+.|.+|...|.|.+|++|+.||+|+||.+.++.+......
T Consensus 378 kLPsp~dLrPFPt~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~v 457 (733)
T KOG0650|consen 378 KLPSPKDLRPFPTRCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCV 457 (733)
T ss_pred cCCChhhcCCCcceeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCcee
Confidence 34444444433 34447799999999999999999999999999999999988754211000
Q ss_pred -------------------------------c-----------ccccc---CCccceEEEeecCCeEEEEeecCc-----
Q 022019 101 -------------------------------C-----------SLAKD---QDSYEASLVVTEGESVYDFCWFPH----- 130 (304)
Q Consensus 101 -------------------------------~-----------~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~----- 130 (304)
. ..... ......++.+.+...|..+.|+-.
T Consensus 458 LAvA~~~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYla 537 (733)
T KOG0650|consen 458 LAVAVGECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLA 537 (733)
T ss_pred EEEEecCceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEE
Confidence 0 00000 011113456677778888888432
Q ss_pred ---------------------------------cceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceE
Q 022019 131 ---------------------------------MSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAF 177 (304)
Q Consensus 131 ---------------------------------~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~ 177 (304)
.+.|+|...+|++++. ..|++||+..+..+..+.... ..|.
T Consensus 538 tV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~tg~-----kwiS 611 (733)
T KOG0650|consen 538 TVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLTGS-----KWIS 611 (733)
T ss_pred EeccCCCcceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhcCC-----eeee
Confidence 1334444444444443 345556555544443333222 2788
Q ss_pred EEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC---
Q 022019 178 SVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED--- 253 (304)
Q Consensus 178 ~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~--- 253 (304)
+++.+|.|..|++| .|+.+..||+.....+.+.+ ..|...+++++|++ .-.++++|+.||++.||.-.
T Consensus 612 ~msihp~GDnli~gs~d~k~~WfDldlsskPyk~l-------r~H~~avr~Va~H~-ryPLfas~sdDgtv~Vfhg~VY~ 683 (733)
T KOG0650|consen 612 SMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTL-------RLHEKAVRSVAFHK-RYPLFASGSDDGTVIVFHGMVYN 683 (733)
T ss_pred eeeecCCCCeEEEecCCCeeEEEEcccCcchhHHh-------hhhhhhhhhhhhcc-ccceeeeecCCCcEEEEeeeeeh
Confidence 99999999888865 99999999998764444322 66888899999999 66699999999999998532
Q ss_pred ---C---ceEeEEeccccCC----eEEEEECCCCcEEEEeeccCCeEEEE
Q 022019 254 ---N---MELLYVLHGQEGG----VTHVQFSRDGNYLYTGGRKDPYILCW 293 (304)
Q Consensus 254 ---~---~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~~d~~i~vw 293 (304)
. --++..+.+|... |..+.|+|...+|+++| .||+|++|
T Consensus 684 Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAG-Ad~tirlf 732 (733)
T KOG0650|consen 684 DLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAG-ADGTIRLF 732 (733)
T ss_pred hhhcCCceEeeeeccCceeecccceEeecccCCCceEEecC-CCceEEee
Confidence 1 1367788888765 99999999999999999 99999998
No 121
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=1.8e-22 Score=149.86 Aligned_cols=197 Identities=18% Similarity=0.320 Sum_probs=156.6
Q ss_pred eeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEE
Q 022019 63 LKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFA 142 (304)
Q Consensus 63 V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~ 142 (304)
-.|+.|++.|.+||+|+.||.|.|||+.+... ......|..+|.+++| |++|+.|+
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~i-----------------ar~lsaH~~pi~sl~W-------S~dgr~Ll 81 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRI-----------------ARMLSAHVRPITSLCW-------SRDGRKLL 81 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccch-----------------hhhhhccccceeEEEe-------cCCCCEee
Confidence 78999999999999999999999999986542 2245566789999999 88999999
Q ss_pred EEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceeeeeeeccccc
Q 022019 143 STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEG 220 (304)
Q Consensus 143 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~ 220 (304)
+++.|..|.+||+..|.+...+.... +|+...|+|.....+ +. .+..-.+.++..+.. ..+.....+
T Consensus 82 tsS~D~si~lwDl~~gs~l~rirf~s------pv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h-----~~Lp~d~d~ 150 (405)
T KOG1273|consen 82 TSSRDWSIKLWDLLKGSPLKRIRFDS------PVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKH-----SVLPKDDDG 150 (405)
T ss_pred eecCCceeEEEeccCCCceeEEEccC------ccceeeeccccCCeEEEEEecCCcEEEEecCCce-----eeccCCCcc
Confidence 99999999999999999998888776 999999999644333 33 555566666653211 111111111
Q ss_pred c-ccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc-CCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 221 Q-AGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE-GGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 221 ~-~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
. .....+..|++ .+.++++|...|.+.++|..+.+++..++... ..|..+.++..|++|+.-+ .|..|+.|+++
T Consensus 151 dln~sas~~~fdr-~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNt-sDRvIR~ye~~ 226 (405)
T KOG1273|consen 151 DLNSSASHGVFDR-RGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINT-SDRVIRTYEIS 226 (405)
T ss_pred ccccccccccccC-CCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEec-CCceEEEEehh
Confidence 1 11123346888 88899999999999999999999999988655 7899999999999999999 99999999986
No 122
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.91 E-value=2.3e-23 Score=163.68 Aligned_cols=228 Identities=20% Similarity=0.361 Sum_probs=174.3
Q ss_pred eeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEE
Q 022019 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV 115 (304)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (304)
+.+|++.......+...+. .....+.|.++...|||+.|++|+.-.++.|||+.......+....
T Consensus 442 VKVWdis~pg~k~PvsqLd-cl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaelt-------------- 506 (705)
T KOG0639|consen 442 VKVWDISQPGNKSPVSQLD-CLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELT-------------- 506 (705)
T ss_pred EEEeeccCCCCCCcccccc-ccCcccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcC--------------
Confidence 4567765442222212221 2234678999999999999999999999999999854332111110
Q ss_pred eecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCC
Q 022019 116 VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNK 194 (304)
Q Consensus 116 ~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~ 194 (304)
......+. ++++||.++.+++..||.|.|||+.+...+..+..|.. .+.||.++++|..|.+| -|+
T Consensus 507 -ssapaCyA-------La~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtD-----GascIdis~dGtklWTGGlDn 573 (705)
T KOG0639|consen 507 -SSAPACYA-------LAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD-----GASCIDISKDGTKLWTGGLDN 573 (705)
T ss_pred -Ccchhhhh-------hhcCCccceeeeeccCCcEEEEEcccceeeecccCCCC-----CceeEEecCCCceeecCCCcc
Confidence 00112222 35599999999999999999999999999999998776 88999999999999976 999
Q ss_pred eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEEC
Q 022019 195 SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFS 274 (304)
Q Consensus 195 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 274 (304)
+|+.||++.... +.. ......|.++..+| .+.++++|.+++.+.|-.... .....+.-|++.|.++.|.
T Consensus 574 tvRcWDlregrq-------lqq--hdF~SQIfSLg~cP-~~dWlavGMens~vevlh~sk-p~kyqlhlheScVLSlKFa 642 (705)
T KOG0639|consen 574 TVRCWDLREGRQ-------LQQ--HDFSSQIFSLGYCP-TGDWLAVGMENSNVEVLHTSK-PEKYQLHLHESCVLSLKFA 642 (705)
T ss_pred ceeehhhhhhhh-------hhh--hhhhhhheecccCC-CccceeeecccCcEEEEecCC-ccceeecccccEEEEEEec
Confidence 999999987421 111 22345689999999 788999999999999988743 4445677799999999999
Q ss_pred CCCcEEEEeeccCCeEEEEecccceeeee
Q 022019 275 RDGNYLYTGGRKDPYILCWDLRKAVQVVY 303 (304)
Q Consensus 275 ~~~~~l~~~~~~d~~i~vwd~~~~~~~~~ 303 (304)
+.|+++++.| .|+.+..|.+--|..|++
T Consensus 643 ~cGkwfvStG-kDnlLnawrtPyGasiFq 670 (705)
T KOG0639|consen 643 YCGKWFVSTG-KDNLLNAWRTPYGASIFQ 670 (705)
T ss_pred ccCceeeecC-chhhhhhccCccccceee
Confidence 9999999999 999999999888777653
No 123
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.91 E-value=3.1e-22 Score=152.75 Aligned_cols=218 Identities=21% Similarity=0.356 Sum_probs=165.7
Q ss_pred ceeeeecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecC
Q 022019 51 NQFRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP 129 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 129 (304)
+.+-...||+++|..++|+| +...+|+||.|.+|.||.+.++.+..... .....+.+|...|--+.|+|
T Consensus 72 ~~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~lt----------epvv~L~gH~rrVg~V~wHP 141 (472)
T KOG0303|consen 72 ASYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLT----------EPVVELYGHQRRVGLVQWHP 141 (472)
T ss_pred CCCCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcc----------cceEEEeecceeEEEEeecc
Confidence 34446789999999999999 66789999999999999998776543332 22346778889999999998
Q ss_pred ccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcCCeEEEEEcCCCCccc
Q 022019 130 HMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDF 208 (304)
Q Consensus 130 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~~i~v~d~~~~~~~~ 208 (304)
. ..+.|++++.|.+|.+||+.+|+...++. |. ..|+++.|+.+|.++++ +.|..|+|||.+++.
T Consensus 142 t------A~NVLlsag~Dn~v~iWnv~tgeali~l~-hp-----d~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~--- 206 (472)
T KOG0303|consen 142 T------APNVLLSAGSDNTVSIWNVGTGEALITLD-HP-----DMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGT--- 206 (472)
T ss_pred c------chhhHhhccCCceEEEEeccCCceeeecC-CC-----CeEEEEEeccCCceeeeecccceeEEEcCCCCc---
Confidence 7 34479999999999999999999877766 33 38999999999999995 599999999999842
Q ss_pred eeeeeeecccccccc-ceeEEEeecCCCcEEEEEe---cCCeEEEEecCCceE---eEEeccccCCeEEEEECCCCcEEE
Q 022019 209 EKYSTLKGNKEGQAG-IMSAIAFSPTHTGMLAIGS---YSQTSAIYREDNMEL---LYVLHGQEGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~l~~~~---~dg~i~i~d~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~ 281 (304)
+.....+|.+ ....+.|-. ++.++.+|. .+..+.+||..+.+. ..++. ..+.|.---|.||...|+
T Consensus 207 -----~v~e~~~heG~k~~Raifl~-~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elD-tSnGvl~PFyD~dt~ivY 279 (472)
T KOG0303|consen 207 -----VVSEGVAHEGAKPARAIFLA-SGKIFTTGFSRMSERQIALWDPNNLEEPIALQELD-TSNGVLLPFYDPDTSIVY 279 (472)
T ss_pred -----EeeecccccCCCcceeEEec-cCceeeeccccccccceeccCcccccCcceeEEec-cCCceEEeeecCCCCEEE
Confidence 2111133332 234456666 555555553 367899999876542 33444 345677778899999998
Q ss_pred EeeccCCeEEEEeccccee
Q 022019 282 TGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 282 ~~~~~d~~i~vwd~~~~~~ 300 (304)
.+|..|+.|+.|++.+...
T Consensus 280 l~GKGD~~IRYyEit~d~P 298 (472)
T KOG0303|consen 280 LCGKGDSSIRYFEITNEPP 298 (472)
T ss_pred EEecCCcceEEEEecCCCc
Confidence 8887899999999987654
No 124
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.91 E-value=4.3e-23 Score=153.54 Aligned_cols=218 Identities=16% Similarity=0.246 Sum_probs=171.5
Q ss_pred cceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecC
Q 022019 50 YNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP 129 (304)
Q Consensus 50 ~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 129 (304)
++..+.+.||++.|+.++-......+.+++.|.+.+||.++++.+.. ...+|.+.|.++.|
T Consensus 138 ~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~-----------------~Y~GH~GSVNsikf-- 198 (481)
T KOG0300|consen 138 FRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLA-----------------TYTGHTGSVNSIKF-- 198 (481)
T ss_pred EeehhhhcccccceeeehhhcCCcceeecccccceeEEeecccccee-----------------eecccccceeeEEe--
Confidence 34566789999999999998877799999999999999999776533 34456688999988
Q ss_pred ccceeCCCccEEEEEeCCCCEEEEEc------CCC--------e--e-------------------eEEeeccccccccc
Q 022019 130 HMSASDPTSCVFASTTRDHPIHLWDA------TTG--------L--L-------------------RCTYRAYDAVDEIT 174 (304)
Q Consensus 130 ~~~~~~~~~~~l~~~~~dg~i~i~d~------~~~--------~--~-------------------~~~~~~~~~~~~~~ 174 (304)
++.+.++++++.|++-+||.. ... + . ....+.....+|..
T Consensus 199 -----h~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~ 273 (481)
T KOG0300|consen 199 -----HNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRA 273 (481)
T ss_pred -----ccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeecccc
Confidence 668889999999999999972 110 0 0 00000111123445
Q ss_pred ceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC
Q 022019 175 AAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~ 253 (304)
.|.+..|-..|+.++++ -|.+..+||+++ ..+...+.+|....+.++-+| ..+++++++.|.+.++||++
T Consensus 274 vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEt--------ge~v~~LtGHd~ELtHcstHp-tQrLVvTsSrDtTFRLWDFR 344 (481)
T KOG0300|consen 274 VVSACDWLAGGQQMVTASWDRTANLWDVET--------GEVVNILTGHDSELTHCSTHP-TQRLVVTSSRDTTFRLWDFR 344 (481)
T ss_pred ceEehhhhcCcceeeeeeccccceeeeecc--------CceeccccCcchhccccccCC-cceEEEEeccCceeEeccch
Confidence 77888888888888855 999999999988 344455588999999999999 88899999999999999998
Q ss_pred Cc-eEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceeee
Q 022019 254 NM-ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 254 ~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
.. ..+..|.||...|+++.|..+. .+++|+ +|.+|++||+++.+..+
T Consensus 345 eaI~sV~VFQGHtdtVTS~vF~~dd-~vVSgS-DDrTvKvWdLrNMRspl 392 (481)
T KOG0300|consen 345 EAIQSVAVFQGHTDTVTSVVFNTDD-RVVSGS-DDRTVKVWDLRNMRSPL 392 (481)
T ss_pred hhcceeeeecccccceeEEEEecCC-ceeecC-CCceEEEeeeccccCcc
Confidence 43 3577889999999999998765 488899 99999999999876543
No 125
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=1.5e-22 Score=163.32 Aligned_cols=196 Identities=19% Similarity=0.317 Sum_probs=157.9
Q ss_pred EEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEE
Q 022019 65 GIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFAST 144 (304)
Q Consensus 65 ~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~ 144 (304)
-+.|+. .+.||.|. ...|.+|+..++... .+...+...|+++.| +++|.+|++|
T Consensus 182 lldWss-~n~laVal-g~~vylW~~~s~~v~-----------------~l~~~~~~~vtSv~w-------s~~G~~LavG 235 (484)
T KOG0305|consen 182 LLDWSS-ANVLAVAL-GQSVYLWSASSGSVT-----------------ELCSFGEELVTSVKW-------SPDGSHLAVG 235 (484)
T ss_pred Hhhccc-CCeEEEEe-cceEEEEecCCCceE-----------------EeEecCCCceEEEEE-------CCCCCEEEEe
Confidence 377873 44666654 447999998765421 122122578999988 7899999999
Q ss_pred eCCCCEEEEEcCCCeeeEEeec-ccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccc
Q 022019 145 TRDHPIHLWDATTGLLRCTYRA-YDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQA 222 (304)
Q Consensus 145 ~~dg~i~i~d~~~~~~~~~~~~-~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 222 (304)
..+|.|.|||..+.+....+.. |.. .|-+++|+ +..+.+| .++.|..+|++....... ...+|.
T Consensus 236 ~~~g~v~iwD~~~~k~~~~~~~~h~~-----rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~-------~~~~H~ 301 (484)
T KOG0305|consen 236 TSDGTVQIWDVKEQKKTRTLRGSHAS-----RVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVS-------TLQGHR 301 (484)
T ss_pred ecCCeEEEEehhhccccccccCCcCc-----eeEEEecc--CceEEEecCCCcEEEEEEecchhhhh-------hhhccc
Confidence 9999999999998888777776 443 89999998 5566666 999999999998543222 247889
Q ss_pred cceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCC-CcEEEEee-ccCCeEEEEeccccee
Q 022019 223 GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRD-GNYLYTGG-RKDPYILCWDLRKAVQ 300 (304)
Q Consensus 223 ~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~-~~d~~i~vwd~~~~~~ 300 (304)
..|..++|++ ++.++|+|+.|+.+.|||.....++..+..|...|..++|+|- ...||+|+ ..|++|++||+.+++.
T Consensus 302 qeVCgLkws~-d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~ 380 (484)
T KOG0305|consen 302 QEVCGLKWSP-DGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGAR 380 (484)
T ss_pred ceeeeeEECC-CCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcE
Confidence 9999999999 7889999999999999999888999999999999999999995 45677765 4799999999999876
Q ss_pred e
Q 022019 301 V 301 (304)
Q Consensus 301 ~ 301 (304)
+
T Consensus 381 i 381 (484)
T KOG0305|consen 381 I 381 (484)
T ss_pred e
Confidence 5
No 126
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.91 E-value=1.6e-23 Score=178.97 Aligned_cols=217 Identities=15% Similarity=0.218 Sum_probs=170.5
Q ss_pred ceeeeecCCCCceeEEEEcCC-CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecC
Q 022019 51 NQFRTSSIPNNFLKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP 129 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~~-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 129 (304)
..+.....|.+.|..+.|++. +++||+|+.||.|.|||+.+.+...... .......|.+++|+-
T Consensus 107 ~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~---------------~~~~~~eI~~lsWNr 171 (1049)
T KOG0307|consen 107 EVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPG---------------SQAPPSEIKCLSWNR 171 (1049)
T ss_pred HHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCC---------------CCCCcccceEeccch
Confidence 345567889999999999995 5599999999999999998644322211 111236789999953
Q ss_pred ccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCC-cEEE-EE-cC--CeEEEEEcCCC
Q 022019 130 HMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG-TKIF-AG-YN--KSVRVFDVHRP 204 (304)
Q Consensus 130 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~-~~-~d--~~i~v~d~~~~ 204 (304)
. ....|++++.+|.+.|||++..+.+..+..+... ..+..++|+|++ ..++ ++ .| -.|.+||+|..
T Consensus 172 k------vqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~---~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~a 242 (1049)
T KOG0307|consen 172 K------VSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGR---MHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFA 242 (1049)
T ss_pred h------hhHHhhccCCCCCceeccccCCCcccccccCCCc---cceeeeeeCCCCceeeeeecCCCCCceeEeeccccc
Confidence 2 4457999999999999999988777666655432 257899999986 3344 44 33 46999999875
Q ss_pred CccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCc-EEEEe
Q 022019 205 GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN-YLYTG 283 (304)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~ 283 (304)
....+ ...+|...|.++.|++.+.+++++++.|+.|.+|+.++++.+..+.....++..+.|+|... .++++
T Consensus 243 ssP~k-------~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~a 315 (1049)
T KOG0307|consen 243 SSPLK-------ILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAA 315 (1049)
T ss_pred CCchh-------hhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhh
Confidence 43333 23788999999999998889999999999999999999999999998888999999999887 55556
Q ss_pred eccCCeEEEEecccce
Q 022019 284 GRKDPYILCWDLRKAV 299 (304)
Q Consensus 284 ~~~d~~i~vwd~~~~~ 299 (304)
+ .||.|.||.+..+.
T Consensus 316 s-fdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 316 S-FDGKISIYSLQGTD 330 (1049)
T ss_pred e-eccceeeeeeecCC
Confidence 6 99999999997654
No 127
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.91 E-value=2.3e-21 Score=143.50 Aligned_cols=223 Identities=16% Similarity=0.254 Sum_probs=157.3
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
...+|.+-|.++.|.+-|+.+|||+.|++|+|||.....- ......-...|...|..+.|.+
T Consensus 8 i~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~-------------~W~~Ts~Wrah~~Si~rV~WAh----- 69 (361)
T KOG2445|consen 8 IDSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSG-------------TWSCTSSWRAHDGSIWRVVWAH----- 69 (361)
T ss_pred cccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCC-------------ceEEeeeEEecCCcEEEEEecC-----
Confidence 3468999999999999999999999999999999754321 2222334556788999999954
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCe--e--eEEeecccccccccceEEEEECCC--CcEEE-EEcCCeEEEEEcCCCCcc
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGL--L--RCTYRAYDAVDEITAAFSVAFNPT--GTKIF-AGYNKSVRVFDVHRPGRD 207 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~--~--~~~~~~~~~~~~~~~v~~i~~~~~--~~~l~-~~~d~~i~v~d~~~~~~~ 207 (304)
..-|+.+|+++.|+++.||.=.... . ..-............|+.+.|.|. |-.++ ++.||.++||+.-.+...
T Consensus 70 PEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nL 149 (361)
T KOG2445|consen 70 PEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNL 149 (361)
T ss_pred ccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCcccc
Confidence 3468899999999999999742110 0 000111111123348999999995 56666 459999999998653221
Q ss_pred c-----eeeeeeeccccccccceeEEEeecCC--CcEEEEEecC-----CeEEEEecCC----ceEeEEeccccCCeEEE
Q 022019 208 F-----EKYSTLKGNKEGQAGIMSAIAFSPTH--TGMLAIGSYS-----QTSAIYREDN----MELLYVLHGQEGGVTHV 271 (304)
Q Consensus 208 ~-----~~~~~~~~~~~~~~~~v~~~~~~p~~--~~~l~~~~~d-----g~i~i~d~~~----~~~~~~~~~~~~~v~~~ 271 (304)
. ..++.+......+..+..|+.|+|.. ..+|++|+.+ +.+.||.... ...+.++.+|..+|+++
T Consensus 150 s~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di 229 (361)
T KOG2445|consen 150 SQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDI 229 (361)
T ss_pred ccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceee
Confidence 1 11111222233456678899999832 3578888876 4788886543 34677788999999999
Q ss_pred EECCCC----cEEEEeeccCCeEEEEeccc
Q 022019 272 QFSRDG----NYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 272 ~~~~~~----~~l~~~~~~d~~i~vwd~~~ 297 (304)
+|.|+- ..||+++ .|| |+||+++.
T Consensus 230 ~wAPn~Gr~y~~lAvA~-kDg-v~I~~v~~ 257 (361)
T KOG2445|consen 230 SWAPNIGRSYHLLAVAT-KDG-VRIFKVKV 257 (361)
T ss_pred eeccccCCceeeEEEee-cCc-EEEEEEee
Confidence 999963 4688888 999 99999985
No 128
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.90 E-value=1.4e-20 Score=150.30 Aligned_cols=252 Identities=15% Similarity=0.155 Sum_probs=155.5
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeE-EEecCCCeEEEeeCCCCCCccccccc------cccccC
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSF-LTSSEDKTLRIFSLPENGISYDVNAC------SLAKDQ 107 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l-~s~~~dg~v~vwd~~~~~~~~~~~~~------~~~~~~ 107 (304)
.+..|+........ .+..|. .+.+++|+|+++.+ ++++.++.|++||..+++........ ....+.
T Consensus 12 ~v~~~d~~t~~~~~------~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g 84 (300)
T TIGR03866 12 TISVIDTATLEVTR------TFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPDPELFALHPNG 84 (300)
T ss_pred EEEEEECCCCceEE------EEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCCccEEEECCCC
Confidence 34556665544332 444443 36789999999876 56778899999999876543221110 000000
Q ss_pred ---------CccceEEEeecCCeEEEEe--ecCccceeCCCccEEEEEeCCC-CEEEEEcCCCeeeEEeecccccccccc
Q 022019 108 ---------DSYEASLVVTEGESVYDFC--WFPHMSASDPTSCVFASTTRDH-PIHLWDATTGLLRCTYRAYDAVDEITA 175 (304)
Q Consensus 108 ---------~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~~~ 175 (304)
......+.......+..+. ..+..++++|++.++++++.++ .+.+||..+++......... .
T Consensus 85 ~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~------~ 158 (300)
T TIGR03866 85 KILYIANEDDNLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVDQ------R 158 (300)
T ss_pred CEEEEEcCCCCeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcCC------C
Confidence 0111111111111121111 1245567789999999888765 46778988776655443221 4
Q ss_pred eEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC
Q 022019 176 AFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (304)
Q Consensus 176 v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~ 253 (304)
+.++.|+|+++.++ ++ .++.|++||+++.. ....+................++|+|++...+++.+.++.+.+||++
T Consensus 159 ~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~ 237 (300)
T TIGR03866 159 PRFAEFTADGKELWVSSEIGGTVSVIDVATRK-VIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAK 237 (300)
T ss_pred ccEEEECCCCCEEEEEcCCCCEEEEEEcCcce-eeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECC
Confidence 56799999999886 44 68999999998642 11111100000000111245688999544444555567789999999
Q ss_pred CceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 254 NMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 254 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+++.+..+. +...+.+++|+|+|.+|++++..+|.|.+||+++++.+
T Consensus 238 ~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~ 284 (300)
T TIGR03866 238 TYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVI 284 (300)
T ss_pred CCcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEE
Confidence 888776654 44578999999999999987536999999999998764
No 129
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.90 E-value=1.5e-23 Score=150.89 Aligned_cols=206 Identities=19% Similarity=0.269 Sum_probs=169.1
Q ss_pred eecCCCCceeEEEEcC---CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 55 TSSIPNNFLKGIKWSP---DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~---~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
+..||..+|..++||| +|-+|++++.||.-.+-+=+++... ....+|...|+..+.
T Consensus 9 ~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwi-----------------gtfeghkgavw~~~l---- 67 (334)
T KOG0278|consen 9 TCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWI-----------------GTFEGHKGAVWSATL---- 67 (334)
T ss_pred EEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcE-----------------EeeeccCcceeeeec----
Confidence 5679999999999997 7889999999998777655554432 245566788887765
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCcccee
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~ 210 (304)
+.+....++++.|-+-++||.-+|..+..+.... -|..++|+.|.++|++| .+.-++|||++.+..+...
T Consensus 68 ---~~na~~aasaaadftakvw~a~tgdelhsf~hkh------ivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E 138 (334)
T KOG0278|consen 68 ---NKNATRAASAAADFTAKVWDAVTGDELHSFEHKH------IVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKE 138 (334)
T ss_pred ---Cchhhhhhhhcccchhhhhhhhhhhhhhhhhhhh------eeeeEEecccchhhhccchHHHhhhhhccCCCCCchh
Confidence 4455678899999999999999998877665332 78999999999999966 9999999999886544433
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeE
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYI 290 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i 290 (304)
+ .+|.+.|..+.|.. ..+.|+++++|++||+||.+++..++++. ...+|+++..+++|++|.++ ..+.|
T Consensus 139 ~-------~ghtg~Ir~v~wc~-eD~~iLSSadd~tVRLWD~rTgt~v~sL~-~~s~VtSlEvs~dG~ilTia--~gssV 207 (334)
T KOG0278|consen 139 I-------SGHTGGIRTVLWCH-EDKCILSSADDKTVRLWDHRTGTEVQSLE-FNSPVTSLEVSQDGRILTIA--YGSSV 207 (334)
T ss_pred h-------cCCCCcceeEEEec-cCceEEeeccCCceEEEEeccCcEEEEEe-cCCCCcceeeccCCCEEEEe--cCcee
Confidence 3 78999999999999 66677888999999999999999999998 56789999999999977766 57899
Q ss_pred EEEecccceee
Q 022019 291 LCWDLRKAVQV 301 (304)
Q Consensus 291 ~vwd~~~~~~~ 301 (304)
.+||..+...+
T Consensus 208 ~Fwdaksf~~l 218 (334)
T KOG0278|consen 208 KFWDAKSFGLL 218 (334)
T ss_pred EEeccccccce
Confidence 99999886554
No 130
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.90 E-value=2.5e-22 Score=147.90 Aligned_cols=173 Identities=18% Similarity=0.327 Sum_probs=138.7
Q ss_pred ecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 56 SSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 56 ~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
-.+|+-.|..+.|-| |...|.+++-|.+++|||..+.+.. ..+.-...|++.+|.|-..
T Consensus 97 ~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a------------------~~F~me~~VYshamSp~a~-- 156 (397)
T KOG4283|consen 97 ENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEA------------------VDFKMEGKVYSHAMSPMAM-- 156 (397)
T ss_pred CccceeeeeeeEEeeecCceeecccccceEEEeecccceee------------------EEeecCceeehhhcChhhh--
Confidence 357888999999999 7778899999999999999865432 3344457888888877532
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~~ 212 (304)
...++|+|..|-.|++.|+.+|....++.+|.. .|.++.|+|...+++ +| .||.|++||++....++..+.
T Consensus 157 --sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~-----~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD 229 (397)
T KOG4283|consen 157 --SHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRD-----GVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLD 229 (397)
T ss_pred --cceEEEEecCCCcEEEEeccCCcceeeeccccC-----ceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEee
Confidence 345788999999999999999999999998776 999999999988777 55 999999999997655443332
Q ss_pred ee-------eccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce
Q 022019 213 TL-------KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME 256 (304)
Q Consensus 213 ~~-------~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~ 256 (304)
.- .....+|.+.+.+++|+. ++.++++++.|..+++|+..+|+
T Consensus 230 ~hn~k~~p~~~~n~ah~gkvngla~tS-d~~~l~~~gtd~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 230 QHNTKRPPILKTNTAHYGKVNGLAWTS-DARYLASCGTDDRIRVWNMESGR 279 (397)
T ss_pred cccCccCccccccccccceeeeeeecc-cchhhhhccCccceEEeecccCc
Confidence 21 123467888999999999 78899999999999999987663
No 131
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.90 E-value=8.8e-23 Score=160.16 Aligned_cols=203 Identities=18% Similarity=0.245 Sum_probs=164.2
Q ss_pred eeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEE
Q 022019 63 LKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFA 142 (304)
Q Consensus 63 V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~ 142 (304)
-.|++......|+++|+..+.|+|||++...+ ......|...|+++.| +....+||
T Consensus 82 ~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~-----------------hr~lkdh~stvt~v~Y-------N~~DeyiA 137 (673)
T KOG4378|consen 82 AFCVACASQSLYEISGGQSGCVKIWDLRAKLI-----------------HRFLKDHQSTVTYVDY-------NNTDEYIA 137 (673)
T ss_pred HHHHhhhhcceeeeccCcCceeeehhhHHHHH-----------------hhhccCCcceeEEEEe-------cCCcceeE
Confidence 34555555558999999999999999973322 2234456688888887 55778999
Q ss_pred EEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE--EEcCCeEEEEEcCCCCccceeeeeeeccccc
Q 022019 143 STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF--AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEG 220 (304)
Q Consensus 143 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~--~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~ 220 (304)
+++..|.|.|..+.++.....+..... ..|.-+.|+|..++++ ++.+|.|.+||+... .........
T Consensus 138 svs~gGdiiih~~~t~~~tt~f~~~sg----qsvRll~ys~skr~lL~~asd~G~VtlwDv~g~-------sp~~~~~~~ 206 (673)
T KOG4378|consen 138 SVSDGGDIIIHGTKTKQKTTTFTIDSG----QSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGM-------SPIFHASEA 206 (673)
T ss_pred EeccCCcEEEEecccCccccceecCCC----CeEEEeecccccceeeEeeccCCeEEEEeccCC-------Ccccchhhh
Confidence 999999999999999887776765533 2667899999988888 459999999999753 223333477
Q ss_pred cccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 221 QAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 221 ~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
|..+...++|+|.+..+|++.+.|..|.+||++..+....+. ...+.+.++|+++|.+|++|. ..|.|..||++..+.
T Consensus 207 HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~-s~G~~i~YD~R~~k~ 284 (673)
T KOG4378|consen 207 HSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLT-YSHPLSTVAFSECGTYLCAGN-SKGELIAYDMRSTKA 284 (673)
T ss_pred ccCCcCcceecCCccceEEEecccceEEEeecccccccceee-ecCCcceeeecCCceEEEeec-CCceEEEEecccCCC
Confidence 899999999999888999999999999999999877777775 467899999999999999999 999999999998765
Q ss_pred ee
Q 022019 301 VV 302 (304)
Q Consensus 301 ~~ 302 (304)
.+
T Consensus 285 Pv 286 (673)
T KOG4378|consen 285 PV 286 (673)
T ss_pred Cc
Confidence 43
No 132
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.90 E-value=6.8e-22 Score=146.86 Aligned_cols=248 Identities=16% Similarity=0.210 Sum_probs=173.8
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccc------cccccCC
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNAC------SLAKDQD 108 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~------~~~~~~~ 108 (304)
.+..||..+..... .+.+|-.+|++++||+||+.|+|++.|..|.+||+..+.....+... .+.+...
T Consensus 46 ~vvI~D~~T~~iar------~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~ 119 (405)
T KOG1273|consen 46 RVVIYDFDTFRIAR------MLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKR 119 (405)
T ss_pred cEEEEEccccchhh------hhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEccCccceeeeccccC
Confidence 56678877766444 78899999999999999999999999999999999988765443321 1222222
Q ss_pred ccceEEEeecCCeEEEE----------------eecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeeccccccc
Q 022019 109 SYEASLVVTEGESVYDF----------------CWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDE 172 (304)
Q Consensus 109 ~~~~~~~~~~~~~v~~~----------------~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 172 (304)
+......+.....+..+ ...+.+..|++.|+++++|...|.+.++|..+.+++..++....
T Consensus 120 n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~--- 196 (405)
T KOG1273|consen 120 NKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSV--- 196 (405)
T ss_pred CeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheeeeeeeechh---
Confidence 22222222111111111 11222334678899999999999999999999998888876552
Q ss_pred ccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCcc-----ceeeeeeeccccccccceeEEEeecCCCcEEEEEec-CC
Q 022019 173 ITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRD-----FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY-SQ 245 (304)
Q Consensus 173 ~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~-dg 245 (304)
..|..+.++..|++++.- .|+.|+.|+++.-... ......+... -....-.+++|+. ++.++++|+. -.
T Consensus 197 -~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDv--VNk~~Wk~ccfs~-dgeYv~a~s~~aH 272 (405)
T KOG1273|consen 197 -QAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDV--VNKLQWKKCCFSG-DGEYVCAGSARAH 272 (405)
T ss_pred -eeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHH--HhhhhhhheeecC-CccEEEeccccce
Confidence 288899999999999965 9999999998731110 1100111000 0112246789999 5656666553 45
Q ss_pred eEEEEecCCceEeEEecccc-CCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 246 TSAIYREDNMELLYVLHGQE-GGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 246 ~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
.++||....|.+++.+.|.+ .....+.|+|-...|++.. .|.+++|....
T Consensus 273 aLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si~--sg~v~iw~~~~ 323 (405)
T KOG1273|consen 273 ALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASIA--SGVVYIWAVVQ 323 (405)
T ss_pred eEEEEecCCcceeeeecCCchhheeecccccceeeeeecc--CCceEEEEeec
Confidence 69999999999999999887 4688899999988888774 89999998754
No 133
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.90 E-value=8.4e-22 Score=144.70 Aligned_cols=233 Identities=16% Similarity=0.265 Sum_probs=167.4
Q ss_pred ceeeecCCCccc---ccccceeeeec-CCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCc-cccccccccccCCc
Q 022019 35 PLIRFDVPPHRT---YHFYNQFRTSS-IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGIS-YDVNACSLAKDQDS 109 (304)
Q Consensus 35 ~~~~~~~~~~~~---~~~~~~~~~~~-~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~-~~~~~~~~~~~~~~ 109 (304)
...+|.++.... +..+..+..+. .+-+.|.|+.|.|++..+++-. |..|.+|++.+.... ..+...
T Consensus 94 ~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss-------- 164 (370)
T KOG1007|consen 94 GAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSS-------- 164 (370)
T ss_pred eEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeeccc--------
Confidence 456677664432 23334444444 5667999999999999998766 789999999866442 111111
Q ss_pred cceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE
Q 022019 110 YEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF 189 (304)
Q Consensus 110 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 189 (304)
....+....++-+|.|+ .+++.+++. .|+++..||+++.+....+.. .|...|..+.|+|+.++++
T Consensus 165 ----~s~e~~~~ftsg~WspH-----Hdgnqv~tt-~d~tl~~~D~RT~~~~~sI~d----AHgq~vrdlDfNpnkq~~l 230 (370)
T KOG1007|consen 165 ----ESAEMRHSFTSGAWSPH-----HDGNQVATT-SDSTLQFWDLRTMKKNNSIED----AHGQRVRDLDFNPNKQHIL 230 (370)
T ss_pred ----ccccccceecccccCCC-----CccceEEEe-CCCcEEEEEccchhhhcchhh----hhcceeeeccCCCCceEEE
Confidence 11123456777788773 377777766 478999999998766555442 2333899999999987766
Q ss_pred -E-EcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc------------
Q 022019 190 -A-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM------------ 255 (304)
Q Consensus 190 -~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~------------ 255 (304)
+ |.||.|++||.|....+. ....+|..++.++.|+|....++++|+.|..|.+|...+-
T Consensus 231 vt~gDdgyvriWD~R~tk~pv-------~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~de 303 (370)
T KOG1007|consen 231 VTCGDDGYVRIWDTRKTKFPV-------QELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDE 303 (370)
T ss_pred EEcCCCccEEEEeccCCCccc-------cccCCCceEEEEEEecCccceEEEecCCCceeEEEecccccccccccccccc
Confidence 3 499999999999864333 3347899999999999988889999999999999964211
Q ss_pred -----------------eEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 256 -----------------ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 256 -----------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
..+.++..|+..|++++||.-.+++++.=+.||++.|=.+..
T Consensus 304 se~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~r 362 (370)
T KOG1007|consen 304 SESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVPR 362 (370)
T ss_pred ccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEEeecCCh
Confidence 134467789999999999988887665544999998876644
No 134
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.90 E-value=5.6e-22 Score=162.19 Aligned_cols=258 Identities=15% Similarity=0.175 Sum_probs=173.6
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCC-----------CCeEEEecCCCeEEEeeCCCCCCccc----cc
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPD-----------GSSFLTSSEDKTLRIFSLPENGISYD----VN 99 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~-----------~~~l~s~~~dg~v~vwd~~~~~~~~~----~~ 99 (304)
.++.||+........ ....--|...|+++.--|. ...|+||+.|++||+|++....-... +.
T Consensus 347 SlYvWDvrD~~kvgk---~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNil 423 (1080)
T KOG1408|consen 347 SLYVWDVRDVNKVGK---CSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNIL 423 (1080)
T ss_pred eEEEEeccccccccc---eeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccc
Confidence 567888876655432 2244468889999887661 13689999999999999986221100 00
Q ss_pred cc---cccccCCccc------eEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeeccccc
Q 022019 100 AC---SLAKDQDSYE------ASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAV 170 (304)
Q Consensus 100 ~~---~~~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 170 (304)
.. .......... ..+.........+-.+-..+++++|+|++|++|..-|.+++|++...+....+..|..
T Consensus 424 s~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHes- 502 (1080)
T KOG1408|consen 424 SANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHES- 502 (1080)
T ss_pred hhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccc-
Confidence 00 0000000000 0000000111112222233445699999999999999999999998887777777665
Q ss_pred ccccceEEEEECCC---CcEEEE-EcCCeEEEEEcCCCCccceeee-------------------ee-------------
Q 022019 171 DEITAAFSVAFNPT---GTKIFA-GYNKSVRVFDVHRPGRDFEKYS-------------------TL------------- 214 (304)
Q Consensus 171 ~~~~~v~~i~~~~~---~~~l~~-~~d~~i~v~d~~~~~~~~~~~~-------------------~~------------- 214 (304)
.|.|+.|+.. .++|++ +.|+.|.|||+...-.....+. .+
T Consensus 503 ----EilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~ 578 (1080)
T KOG1408|consen 503 ----EILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVN 578 (1080)
T ss_pred ----eeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehh
Confidence 9999999863 466774 5999999999864311000000 00
Q ss_pred e----------ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec---cccCCeEEEEECCCCcEEE
Q 022019 215 K----------GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH---GQEGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 215 ~----------~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~ 281 (304)
. ....-....++.|+..| ...++++++.|..|+|||+.+++..+.|+ +|++....+...|.|-||+
T Consensus 579 qk~~~g~~f~r~t~t~~ktTlYDm~Vdp-~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~a 657 (1080)
T KOG1408|consen 579 QKASSGRLFPRHTQTLSKTTLYDMAVDP-TSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLA 657 (1080)
T ss_pred ccccCceeccccccccccceEEEeeeCC-CcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEE
Confidence 0 00011123477888888 67799999999999999999999999997 4667888999999999999
Q ss_pred EeeccCCeEEEEecccceeee
Q 022019 282 TGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 282 ~~~~~d~~i~vwd~~~~~~~~ 302 (304)
+.+ .|.+|.++|+-+|+++.
T Consensus 658 tSc-sdktl~~~Df~sgEcvA 677 (1080)
T KOG1408|consen 658 TSC-SDKTLCFVDFVSGECVA 677 (1080)
T ss_pred Eee-cCCceEEEEeccchhhh
Confidence 999 99999999999998874
No 135
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.89 E-value=1.1e-21 Score=162.63 Aligned_cols=199 Identities=18% Similarity=0.195 Sum_probs=166.0
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
-...+++++.++.|++.+.|...|+|-+|++..+-...... -...|..+|+.++. +.-+
T Consensus 447 ~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~--------------~~~ah~~~V~gla~-------D~~n 505 (910)
T KOG1539|consen 447 DDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFG--------------DSPAHKGEVTGLAV-------DGTN 505 (910)
T ss_pred cCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccc--------------cCccccCceeEEEe-------cCCC
Confidence 34789999999999999999999999999998664322211 11246678888865 5567
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeecc
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGN 217 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~ 217 (304)
+.+++++.+|-+++||..+......+.... .+.++..+.....++.+ .|-.|+++|+.+ ..+...
T Consensus 506 ~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~------~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t--------~kvvR~ 571 (910)
T KOG1539|consen 506 RLLVSAGADGILKFWDFKKKVLKKSLRLGS------SITGIVYHRVSDLLAIALDDFSIRVVDVVT--------RKVVRE 571 (910)
T ss_pred ceEEEccCcceEEEEecCCcceeeeeccCC------CcceeeeeehhhhhhhhcCceeEEEEEchh--------hhhhHH
Confidence 889999999999999999888777766544 77888998888888855 889999999976 455566
Q ss_pred ccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccC-CeEEEEec
Q 022019 218 KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKD-PYILCWDL 295 (304)
Q Consensus 218 ~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d-~~i~vwd~ 295 (304)
+.+|...|++++||| ++++|++++.|++|++||+.++.++..+. -..+++++.|+|+|.+|||+. .| .-|++|-=
T Consensus 572 f~gh~nritd~~FS~-DgrWlisasmD~tIr~wDlpt~~lID~~~-vd~~~~sls~SPngD~LAT~H-vd~~gIylWsN 647 (910)
T KOG1539|consen 572 FWGHGNRITDMTFSP-DGRWLISASMDSTIRTWDLPTGTLIDGLL-VDSPCTSLSFSPNGDFLATVH-VDQNGIYLWSN 647 (910)
T ss_pred hhccccceeeeEeCC-CCcEEEEeecCCcEEEEeccCcceeeeEe-cCCcceeeEECCCCCEEEEEE-ecCceEEEEEc
Confidence 689999999999999 88999999999999999999999998886 467889999999999999999 55 67999953
No 136
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.89 E-value=1.9e-22 Score=158.56 Aligned_cols=207 Identities=14% Similarity=0.208 Sum_probs=162.6
Q ss_pred CCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEE-eecCCeEEEEeecCccceeCC
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV-VTEGESVYDFCWFPHMSASDP 136 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~ 136 (304)
.|..-|..+.+|...++++||+. |.|+|||+....-. ..+..+. ......+.++.. .|
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k-------------~PvsqLdcl~rdnyiRSckL-------~p 475 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNK-------------SPVSQLDCLNRDNYIRSCKL-------LP 475 (705)
T ss_pred ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCC-------------CccccccccCcccceeeeEe-------cC
Confidence 58889999999999999999985 68999999754221 1111111 113345555554 77
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeee
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLK 215 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~ 215 (304)
||+.|++|++-.++.|||+.........+.... ...++.++.+||.+..+++ .||.|.|||+.. +.+.
T Consensus 476 dgrtLivGGeastlsiWDLAapTprikaeltss---apaCyALa~spDakvcFsccsdGnI~vwDLhn--------q~~V 544 (705)
T KOG0639|consen 476 DGRTLIVGGEASTLSIWDLAAPTPRIKAELTSS---APACYALAISPDAKVCFSCCSDGNIAVWDLHN--------QTLV 544 (705)
T ss_pred CCceEEeccccceeeeeeccCCCcchhhhcCCc---chhhhhhhcCCccceeeeeccCCcEEEEEccc--------ceee
Confidence 999999999999999999987654433332221 1167889999999998855 999999999987 5666
Q ss_pred ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEec
Q 022019 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 216 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
..+.+|.+.+.|+..++ ++..|.+|+-|++|+-||++.+..+.... ..+.|.++..+|.+.+|+.|- .++.+-|-..
T Consensus 545 rqfqGhtDGascIdis~-dGtklWTGGlDntvRcWDlregrqlqqhd-F~SQIfSLg~cP~~dWlavGM-ens~vevlh~ 621 (705)
T KOG0639|consen 545 RQFQGHTDGASCIDISK-DGTKLWTGGLDNTVRCWDLREGRQLQQHD-FSSQIFSLGYCPTGDWLAVGM-ENSNVEVLHT 621 (705)
T ss_pred ecccCCCCCceeEEecC-CCceeecCCCccceeehhhhhhhhhhhhh-hhhhheecccCCCccceeeec-ccCcEEEEec
Confidence 67799999999999999 78899999999999999999988765554 456799999999999999999 8988888777
Q ss_pred ccce
Q 022019 296 RKAV 299 (304)
Q Consensus 296 ~~~~ 299 (304)
...+
T Consensus 622 skp~ 625 (705)
T KOG0639|consen 622 SKPE 625 (705)
T ss_pred CCcc
Confidence 6543
No 137
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=3.7e-21 Score=142.37 Aligned_cols=199 Identities=20% Similarity=0.190 Sum_probs=147.7
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+..|..+|.||.+++....+++|++|++|++||....... .....+..|+++..
T Consensus 89 ~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~------------------~~~d~~kkVy~~~v------- 143 (323)
T KOG1036|consen 89 QIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVV------------------GTFDQGKKVYCMDV------- 143 (323)
T ss_pred eeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccc------------------cccccCceEEEEec-------
Confidence 45679999999999998889999999999999998852221 11223357777744
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCCccceeeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
.++.|++|+.|..+.+||+++.......... .-.-.+.++++-|++.-++ ++-||.|.+=.++...........
T Consensus 144 --~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS---~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkya 218 (323)
T KOG1036|consen 144 --SGNRLVVGTSDRKVLIYDLRNLDEPFQRRES---SLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYA 218 (323)
T ss_pred --cCCEEEEeecCceEEEEEcccccchhhhccc---cceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhcee
Confidence 6779999999999999999976543322111 1112678999999876666 559999988766653111111111
Q ss_pred eec-----cccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEee
Q 022019 214 LKG-----NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 214 ~~~-----~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
++. .....-.+|.+++|+| -...|++|+.||.|.+||+.+.+.+..+......|.+++|+.+|..||+++
T Consensus 219 FkCHr~~~~~~~~~yPVNai~Fhp-~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~ 293 (323)
T KOG1036|consen 219 FKCHRLSEKDTEIIYPVNAIAFHP-IHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIAS 293 (323)
T ss_pred EEeeecccCCceEEEEeceeEecc-ccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEe
Confidence 111 1112235799999999 567899999999999999999999999988888899999999999999987
No 138
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.89 E-value=1.1e-21 Score=144.06 Aligned_cols=220 Identities=17% Similarity=0.193 Sum_probs=161.3
Q ss_pred eecCCCCceeEEEEcC-CCCeEEEecCC-------CeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEe
Q 022019 55 TSSIPNNFLKGIKWSP-DGSSFLTSSED-------KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFC 126 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~-~~~~l~s~~~d-------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 126 (304)
.+..|.+.|+.|+-+| +.+.|+|+-.+ -.+-||.+.+......... -..+..+...+-..+.++.
T Consensus 58 vf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~t-------lE~v~~Ldteavg~i~cve 130 (370)
T KOG1007|consen 58 VFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSST-------LECVASLDTEAVGKINCVE 130 (370)
T ss_pred hhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccch-------hhHhhcCCHHHhCceeeEE
Confidence 5678899999999999 55677776442 2467999875432211000 0111112222234788898
Q ss_pred ecCccceeCCCccEEEEEeCCCCEEEEEcCCCee-eEEeecccccccccceEEEEECC--CCcEEEEEcCCeEEEEEcCC
Q 022019 127 WFPHMSASDPTSCVFASTTRDHPIHLWDATTGLL-RCTYRAYDAVDEITAAFSVAFNP--TGTKIFAGYNKSVRVFDVHR 203 (304)
Q Consensus 127 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~~~v~~i~~~~--~~~~l~~~~d~~i~v~d~~~ 203 (304)
| .|++..+++-. |..|.+|++..+.. ...+.......+....++-+|+| +++.+++..|+++..||+|+
T Consensus 131 w-------~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~tl~~~D~RT 202 (370)
T KOG1007|consen 131 W-------EPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDSTLQFWDLRT 202 (370)
T ss_pred E-------cCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCCCcEEEEEccc
Confidence 8 55777787765 78899999987765 44444333333444778899999 78899999999999999997
Q ss_pred CCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc-eEeEEeccccCCeEEEEECCCC-cEEE
Q 022019 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM-ELLYVLHGQEGGVTHVQFSRDG-NYLY 281 (304)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~l~ 281 (304)
... ......+|...+..+.|+|+...+|++|+.||.|+|||.+.- .+++++.+|..+|.++.|+|.. ..|+
T Consensus 203 ~~~-------~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiL 275 (370)
T KOG1007|consen 203 MKK-------NNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLIL 275 (370)
T ss_pred hhh-------hcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEE
Confidence 422 222236788889999999988889999999999999999864 5899999999999999999965 5677
Q ss_pred EeeccCCeEEEEeccc
Q 022019 282 TGGRKDPYILCWDLRK 297 (304)
Q Consensus 282 ~~~~~d~~i~vwd~~~ 297 (304)
+|| .|..|.+|....
T Consensus 276 s~~-SDs~V~Lsca~s 290 (370)
T KOG1007|consen 276 SGG-SDSAVNLSCASS 290 (370)
T ss_pred ecC-CCceeEEEeccc
Confidence 888 999999997653
No 139
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.89 E-value=6.9e-23 Score=175.10 Aligned_cols=215 Identities=17% Similarity=0.281 Sum_probs=159.0
Q ss_pred CCceeEEEEcCCCCe----EEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeC
Q 022019 60 NNFLKGIKWSPDGSS----FLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~----l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 135 (304)
...-+.++|.+.|.. +|.|..||.|.+||...-.. +...........|.+.|..+.|++.
T Consensus 64 ~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~-----------~~~~~~la~~~~h~G~V~gLDfN~~----- 127 (1049)
T KOG0307|consen 64 SNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIA-----------NASEEVLATKSKHTGPVLGLDFNPF----- 127 (1049)
T ss_pred cccceeeeecccCCCccceeeccccCCceEEecchhhcc-----------CcchHHHhhhcccCCceeeeecccc-----
Confidence 345778999997765 88889999999999874211 1111122234457788998888543
Q ss_pred CCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceeeee
Q 022019 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 136 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
.+++|++|+.||.|.|||+..-+...... .......|.+++|+..-.+|+ ++ .+|.+.|||++.....+.
T Consensus 128 -q~nlLASGa~~geI~iWDlnn~~tP~~~~---~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~---- 199 (1049)
T KOG0307|consen 128 -QGNLLASGADDGEILIWDLNKPETPFTPG---SQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIK---- 199 (1049)
T ss_pred -CCceeeccCCCCcEEEeccCCcCCCCCCC---CCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccc----
Confidence 45599999999999999998754333332 222345899999999776666 44 788999999997522111
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCC---eEEEEecCCc-eEeEEeccccCCeEEEEECCCC-cEEEEeeccCC
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ---TSAIYREDNM-ELLYVLHGQEGGVTHVQFSRDG-NYLYTGGRKDP 288 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg---~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~d~ 288 (304)
+.. ......+..++|+|++...+++++.|. .|.+||+|.. .+++.+.+|..+|.++.|++.+ .+|++++ .|+
T Consensus 200 ls~--~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsg-kD~ 276 (1049)
T KOG0307|consen 200 LSD--TPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSG-KDN 276 (1049)
T ss_pred ccc--CCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhccc-CCC
Confidence 111 112244789999998888888888765 4999999864 5888899999999999999977 7888888 999
Q ss_pred eEEEEecccceee
Q 022019 289 YILCWDLRKAVQV 301 (304)
Q Consensus 289 ~i~vwd~~~~~~~ 301 (304)
.|.+|+.++++.+
T Consensus 277 ~ii~wN~~tgEvl 289 (1049)
T KOG0307|consen 277 RIICWNPNTGEVL 289 (1049)
T ss_pred CeeEecCCCceEe
Confidence 9999999998764
No 140
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.89 E-value=1.5e-21 Score=159.67 Aligned_cols=215 Identities=16% Similarity=0.203 Sum_probs=167.6
Q ss_pred eecCCCCceeEEEEcC---CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 55 TSSIPNNFLKGIKWSP---DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~---~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
....|...|.|+.|+. ..++||+++.|.-|.|||+..+- ........|...|+++.|..
T Consensus 496 ~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny----------------~l~qtld~HSssITsvKFa~-- 557 (1080)
T KOG1408|consen 496 FMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNY----------------DLVQTLDGHSSSITSVKFAC-- 557 (1080)
T ss_pred heecccceeEEEeecCchhhhHhhhhccCCceEEEEeccccc----------------chhhhhcccccceeEEEEee--
Confidence 5689999999999986 45689999999999999987432 12224456778999998832
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcCCeEEEEEcCCCCcccee
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~~i~v~d~~~~~~~~~~ 210 (304)
+.-...+++++.|+.|++--.........+.-+........++.|+..|..+++++ +.|..|+|||+..+. .
T Consensus 558 ---~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgK----q 630 (1080)
T KOG1408|consen 558 ---NGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGK----Q 630 (1080)
T ss_pred ---cCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccc----e
Confidence 33346799999999886544332222222333322233347899999999999995 599999999998742 2
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeE
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYI 290 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i 290 (304)
...++.. .+|.+....+...| .+.++++.+.|.++.+||.-+++++..+.||...|+.+.|.+|-+.|++.+ .||+|
T Consensus 631 ~k~FKgs-~~~eG~lIKv~lDP-SgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvs-gDgCI 707 (1080)
T KOG1408|consen 631 VKSFKGS-RDHEGDLIKVILDP-SGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVS-GDGCI 707 (1080)
T ss_pred eeeeccc-ccCCCceEEEEECC-CccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhheeec-CCceE
Confidence 2233322 45667778899999 888999999999999999999999999999999999999999999999999 99999
Q ss_pred EEEeccc
Q 022019 291 LCWDLRK 297 (304)
Q Consensus 291 ~vwd~~~ 297 (304)
.||.+..
T Consensus 708 FvW~lp~ 714 (1080)
T KOG1408|consen 708 FVWKLPL 714 (1080)
T ss_pred EEEECch
Confidence 9999865
No 141
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.89 E-value=2e-21 Score=158.09 Aligned_cols=201 Identities=17% Similarity=0.294 Sum_probs=161.3
Q ss_pred eeecCCCCceeE-EEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 54 RTSSIPNNFLKG-IKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 54 ~~~~~h~~~V~~-i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
..+.+|.+.|.+ +++.+ ++-.+++|+.|+++.+|.+....... ++.+|...|.++.-
T Consensus 51 ~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~-----------------~LkgH~snVC~ls~---- 109 (745)
T KOG0301|consen 51 HAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLY-----------------TLKGHKSNVCSLSI---- 109 (745)
T ss_pred eecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchh-----------------hhhccccceeeeec----
Confidence 356678888888 89886 55579999999999999987654432 44556678877753
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceee
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~ 211 (304)
..++. +++||.|.++++|.. +++...+..|.. .|+++..-|++.++.++.|.+|++|.-.+
T Consensus 110 ---~~~~~-~iSgSWD~TakvW~~--~~l~~~l~gH~a-----sVWAv~~l~e~~~vTgsaDKtIklWk~~~-------- 170 (745)
T KOG0301|consen 110 ---GEDGT-LISGSWDSTAKVWRI--GELVYSLQGHTA-----SVWAVASLPENTYVTGSADKTIKLWKGGT-------- 170 (745)
T ss_pred ---CCcCc-eEecccccceEEecc--hhhhcccCCcch-----heeeeeecCCCcEEeccCcceeeeccCCc--------
Confidence 23444 899999999999975 455555666555 99999999999666667999999998632
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEE
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYIL 291 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~ 291 (304)
....+.+|.+.|+.+++-| +. .+++++.||.|++|++ +++.+.++.+|...|++++..+++..++++| .|++++
T Consensus 171 --~l~tf~gHtD~VRgL~vl~-~~-~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~g-EDrtlr 244 (745)
T KOG0301|consen 171 --LLKTFSGHTDCVRGLAVLD-DS-HFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTG-EDRTLR 244 (745)
T ss_pred --hhhhhccchhheeeeEEec-CC-CeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEec-CCceEE
Confidence 2233478999999999998 43 4789999999999999 8889999999999999999888888999999 999999
Q ss_pred EEeccccee
Q 022019 292 CWDLRKAVQ 300 (304)
Q Consensus 292 vwd~~~~~~ 300 (304)
+|+.....+
T Consensus 245 iW~~~e~~q 253 (745)
T KOG0301|consen 245 IWKKDECVQ 253 (745)
T ss_pred EeecCceEE
Confidence 999875433
No 142
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.89 E-value=3.9e-21 Score=147.23 Aligned_cols=260 Identities=16% Similarity=0.253 Sum_probs=175.9
Q ss_pred hcHHhhccccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcccccc
Q 022019 21 VTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNA 100 (304)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 100 (304)
...+++.+...+.|.+..-...... ....-+..+..|...|+++.|+|+|..||+|+.+|.|.+|-....... ....
T Consensus 28 ~laT~G~D~~iriW~v~r~~~~~~~--~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~-~~d~ 104 (434)
T KOG1009|consen 28 KLATAGGDKDIRIWKVNRSEPGGGD--MKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIF-DADT 104 (434)
T ss_pred ceecccCccceeeeeeeecCCCCCc--eeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCc-cccc
Confidence 6677888888888865444433321 122335588999999999999999999999999999999987642221 1111
Q ss_pred ccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEE
Q 022019 101 CSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVA 180 (304)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~ 180 (304)
..........+......|...++.++| +|++..+++++-|..+++||+..|+....+..|.. -+..++
T Consensus 105 e~~~~ke~w~v~k~lr~h~~diydL~W-------s~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~-----yvqgva 172 (434)
T KOG1009|consen 105 EADLNKEKWVVKKVLRGHRDDIYDLAW-------SPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEH-----YVQGVA 172 (434)
T ss_pred hhhhCccceEEEEEecccccchhhhhc-------cCCCceeeeeeccceEEEEEeccceeEeecccccc-----ccceee
Confidence 111111223344555668899999999 77899999999999999999999999888887765 888999
Q ss_pred ECCCCcEEEE-EcCCeEEEEEcCCCCccceeee--eee------------------------------------------
Q 022019 181 FNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYS--TLK------------------------------------------ 215 (304)
Q Consensus 181 ~~~~~~~l~~-~~d~~i~v~d~~~~~~~~~~~~--~~~------------------------------------------ 215 (304)
|+|-++++++ +.|...+.+.+...... .... .+.
T Consensus 173 wDpl~qyv~s~s~dr~~~~~~~~~~~~~-~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~ 251 (434)
T KOG1009|consen 173 WDPLNQYVASKSSDRHPEGFSAKLKQVI-KRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGL 251 (434)
T ss_pred cchhhhhhhhhccCcccceeeeeeeeee-eeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccce
Confidence 9999988884 56766666555331100 0000 000
Q ss_pred ------------------------ccccccccceeEEEeecC-----------------CCcEEEEEecCCeEEEEecCC
Q 022019 216 ------------------------GNKEGQAGIMSAIAFSPT-----------------HTGMLAIGSYSQTSAIYREDN 254 (304)
Q Consensus 216 ------------------------~~~~~~~~~v~~~~~~p~-----------------~~~~l~~~~~dg~i~i~d~~~ 254 (304)
........+...+.|+|- .+..+++++. ..|+|||.++
T Consensus 252 ~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~-~svyvydtq~ 330 (434)
T KOG1009|consen 252 FKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATK-NSVYVYDTQT 330 (434)
T ss_pred eeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEeec-ceEEEecccc
Confidence 000111112233333320 2233444443 4688888887
Q ss_pred ceEeEEec-cccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 255 MELLYVLH-GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 255 ~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
..++.... -|-..|+.++|++||.+|+..+ .||...+-.++..
T Consensus 331 ~~P~~~v~nihy~~iTDiaws~dg~~l~vSS-~DGyCS~vtfe~~ 374 (434)
T KOG1009|consen 331 LEPLAVVDNIHYSAITDIAWSDDGSVLLVSS-TDGFCSLVTFEPW 374 (434)
T ss_pred ccceEEEeeeeeeeecceeecCCCcEEEEec-cCCceEEEEEcch
Confidence 77766654 5778999999999999999999 9998888776654
No 143
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=3.1e-20 Score=150.84 Aligned_cols=229 Identities=15% Similarity=0.278 Sum_probs=169.5
Q ss_pred ceeeecCCCcccccccceeeeec-CCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSS-IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (304)
.+-.|++...-... ..+. +.+..|.+++|++ +..|++.+.+|.|.-||+.+.+......
T Consensus 48 ~IEiwN~~~~w~~~-----~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~lk~~~~~d-------------- 107 (691)
T KOG2048|consen 48 NIEIWNLSNNWFLE-----PVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITEWDLHTLKQKYNID-------------- 107 (691)
T ss_pred cEEEEccCCCceee-----EEEecCCCCceeeEEEcc-CCeEEeecCCceEEEEecccCceeEEec--------------
Confidence 34456655532222 1333 4467899999994 5578888999999999998765433222
Q ss_pred EEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-c
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y 192 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~ 192 (304)
..+..+++++- +|.+..++.|++||.++.++...++......... ..+.|.+++|+|++..+++| .
T Consensus 108 ---~~gg~IWsiai-------~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~r---q~sRvLslsw~~~~~~i~~Gs~ 174 (691)
T KOG2048|consen 108 ---SNGGAIWSIAI-------NPENTILAIGCDDGVLYDFSIGPDKITYKRSLMR---QKSRVLSLSWNPTGTKIAGGSI 174 (691)
T ss_pred ---CCCcceeEEEe-------CCccceEEeecCCceEEEEecCCceEEEEeeccc---ccceEEEEEecCCccEEEeccc
Confidence 23467888876 6677899999999988888877766544333222 22489999999999999977 9
Q ss_pred CCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEE
Q 022019 193 NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQ 272 (304)
Q Consensus 193 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~ 272 (304)
||.|++||...+.........+.........-|.++.|-. ++ .|++|..-|+|.+||...+.++..+..|...|.+++
T Consensus 175 Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lr-d~-tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~La 252 (691)
T KOG2048|consen 175 DGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLR-DS-TIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALA 252 (691)
T ss_pred CceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEee-cC-cEEEecCCceEEEEcccCcchhhhhhhhhcceeEEE
Confidence 9999999998754332111111122222344577888776 33 789999999999999999999999999999999999
Q ss_pred ECCCCcEEEEeeccCCeEEEEecccce
Q 022019 273 FSRDGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 273 ~~~~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
..+++.+++++| .|+.|.-|...+.+
T Consensus 253 v~~~~d~vfsaG-vd~~ii~~~~~~~~ 278 (691)
T KOG2048|consen 253 VADNEDRVFSAG-VDPKIIQYSLTTNK 278 (691)
T ss_pred EcCCCCeEEEcc-CCCceEEEEecCCc
Confidence 999999999999 99999988877653
No 144
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.88 E-value=2.6e-21 Score=142.26 Aligned_cols=214 Identities=18% Similarity=0.310 Sum_probs=157.4
Q ss_pred CCCCceeEEEEcCCC-----CeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 58 IPNNFLKGIKWSPDG-----SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~-----~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
.|.-+++.+.|.|+. ++|||++. .+|+|.+...+......... ..........+++++.|+..
T Consensus 94 d~~YP~tK~~wiPd~~g~~pdlLATs~D--~LRlWri~~ee~~~~~~~~L--------~~~kns~~~aPlTSFDWne~-- 161 (364)
T KOG0290|consen 94 DHPYPVTKLMWIPDSKGVYPDLLATSSD--FLRLWRIGDEESRVELQSVL--------NNNKNSEFCAPLTSFDWNEV-- 161 (364)
T ss_pred CCCCCccceEecCCccccCcchhhcccC--eEEEEeccCcCCceehhhhh--------ccCcccccCCcccccccccC--
Confidence 678899999999975 35666543 79999987542211111110 00012234468889988643
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCee---eEEeecccccccccceEEEEECCCCcEEE--EEcCCeEEEEEcCCCCcc
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLL---RCTYRAYDAVDEITAAFSVAFNPTGTKIF--AGYNKSVRVFDVHRPGRD 207 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~~~~~v~~i~~~~~~~~l~--~~~d~~i~v~d~~~~~~~ 207 (304)
+-+++.+++-|-+..|||++++.. ...+-.|.. .|+.++|...+..++ +|.||.+++||+|....
T Consensus 162 ----dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDK-----EV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leH- 231 (364)
T KOG0290|consen 162 ----DPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDK-----EVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEH- 231 (364)
T ss_pred ----CcceeEeecccCeEEEEEEeeccccceeeEEEecCc-----ceeEEEeccCccceEEEecCCCcEEEEEeccccc-
Confidence 566999999999999999998732 444555554 999999999765444 57999999999997432
Q ss_pred ceeeeeeeccccccccceeEEEeecCCCcEEEEEecC-CeEEEEecCCc-eEeEEeccccCCeEEEEECCCC-cEEEEee
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-QTSAIYREDNM-ELLYVLHGQEGGVTHVQFSRDG-NYLYTGG 284 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-g~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~ 284 (304)
.++.........+...++|++++.+++|+-..| ..|.|.|++.. .++..+.+|.+.|+.++|.|.. ..|+++|
T Consensus 232 ----STIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaG 307 (364)
T KOG0290|consen 232 ----STIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAG 307 (364)
T ss_pred ----ceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecC
Confidence 222222233356688999999888899886665 56999999974 6899999999999999999964 6789999
Q ss_pred ccCCeEEEEecccc
Q 022019 285 RKDPYILCWDLRKA 298 (304)
Q Consensus 285 ~~d~~i~vwd~~~~ 298 (304)
+|..+.+||+...
T Consensus 308 -DD~qaliWDl~q~ 320 (364)
T KOG0290|consen 308 -DDCQALIWDLQQM 320 (364)
T ss_pred -CcceEEEEecccc
Confidence 9999999999753
No 145
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.88 E-value=8.5e-21 Score=140.18 Aligned_cols=203 Identities=18% Similarity=0.264 Sum_probs=150.6
Q ss_pred eecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 55 TSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
.-.+..+.|.+|+||| ...+++.++.||+||+|++..... ........+..+|.+++|
T Consensus 22 v~~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~---------------~~~ka~~~~~~PvL~v~W------ 80 (347)
T KOG0647|consen 22 VPNPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQ---------------LVPKAQQSHDGPVLDVCW------ 80 (347)
T ss_pred cCCCcccchheeEeccccCceEEecccCCceEEEEEecCCc---------------ccchhhhccCCCeEEEEE------
Confidence 4556788999999999 455666889999999999985311 111244556789999999
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCc--EEEEE-cCCeEEEEEcCCCCcccee
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT--KIFAG-YNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~--~l~~~-~d~~i~v~d~~~~~~~~~~ 210 (304)
+.+|..+++|+.|+.+++||+.+++. ..+..|.. +|.++.|-+... .|++| -|.+|+.||.|... +..
T Consensus 81 -sddgskVf~g~~Dk~~k~wDL~S~Q~-~~v~~Hd~-----pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~-pv~- 151 (347)
T KOG0647|consen 81 -SDDGSKVFSGGCDKQAKLWDLASGQV-SQVAAHDA-----PVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSN-PVA- 151 (347)
T ss_pred -ccCCceEEeeccCCceEEEEccCCCe-eeeeeccc-----ceeEEEEecCCCcceeEecccccceeecccCCCC-eee-
Confidence 77999999999999999999999954 44555555 899999987654 66776 99999999999632 111
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec--cccCCeEEEEECCCCcEEEEeeccCC
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH--GQEGGVTHVQFSRDGNYLYTGGRKDP 288 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~d~ 288 (304)
.+ .....++++..- ..+++++..++.|.+|+++++....... .-+-.+++++..+|....+.|+ -+|
T Consensus 152 --t~-----~LPeRvYa~Dv~---~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGs-iEG 220 (347)
T KOG0647|consen 152 --TL-----QLPERVYAADVL---YPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGS-IEG 220 (347)
T ss_pred --ee-----eccceeeehhcc---CceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeee-ecc
Confidence 11 122345665542 2388999999999999998764322211 1223578899888888788899 999
Q ss_pred eEEEEecccc
Q 022019 289 YILCWDLRKA 298 (304)
Q Consensus 289 ~i~vwd~~~~ 298 (304)
.+-+..+..+
T Consensus 221 rv~iq~id~~ 230 (347)
T KOG0647|consen 221 RVAIQYIDDP 230 (347)
T ss_pred eEEEEecCCC
Confidence 9999988875
No 146
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=1.8e-21 Score=154.92 Aligned_cols=260 Identities=16% Similarity=0.216 Sum_probs=177.6
Q ss_pred hhhcHHhhccccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcccc
Q 022019 19 TEVTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDV 98 (304)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~ 98 (304)
+.....+..+....+|++.. .........+++.++.+|.++|.|++..+++..+++|+-||+|+.|++..+.-....
T Consensus 306 ep~lit~sed~~lk~WnLqk---~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds 382 (577)
T KOG0642|consen 306 EPVLITASEDGTLKLWNLQK---AKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDS 382 (577)
T ss_pred CCeEEEeccccchhhhhhcc---cCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccc
Confidence 33444566777777776522 222223334667789999999999999999999999999999999988633222111
Q ss_pred ccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEE
Q 022019 99 NACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFS 178 (304)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~ 178 (304)
. ..........+|...++.+++ ++....|++++.||++++|+.....+ .++......+ ...+
T Consensus 383 ~-------dp~vl~~~l~Ghtdavw~l~~-------s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g---~Pls 444 (577)
T KOG0642|consen 383 Y-------DPSVLSGTLLGHTDAVWLLAL-------SSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHG---YPLS 444 (577)
T ss_pred c-------Ccchhccceeccccceeeeee-------cccccceeeecCCceEEeeccCCcCc-cccCCccccC---Ccce
Confidence 1 112233467788899988887 55666799999999999999876655 4443332211 3345
Q ss_pred EEECCCC-cEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce
Q 022019 179 VAFNPTG-TKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME 256 (304)
Q Consensus 179 i~~~~~~-~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~ 256 (304)
+++-... .+.+++ .-+.-.++++.... .+..+.............+.-+.++| +..+.+++..|+.|+++|..++.
T Consensus 445 vd~~ss~~a~~~~s~~~~~~~~~~~ev~s-~~~~~~s~~~~~~~~~~~in~vVs~~-~~~~~~~~hed~~Ir~~dn~~~~ 522 (577)
T KOG0642|consen 445 VDRTSSRPAHSLASFRFGYTSIDDMEVVS-DLLIFESSASPGPRRYPQINKVVSHP-TADITFTAHEDRSIRFFDNKTGK 522 (577)
T ss_pred EeeccchhHhhhhhcccccccchhhhhhh-heeeccccCCCcccccCccceEEecC-CCCeeEecccCCceecccccccc
Confidence 5554433 222222 33333344443311 11111111111111123467788999 67899999999999999999999
Q ss_pred EeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceeee
Q 022019 257 LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 257 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
++.....|...++++++.|+|.+|++++ .||.+++|.+....+++
T Consensus 523 ~l~s~~a~~~svtslai~~ng~~l~s~s-~d~sv~l~kld~k~~~~ 567 (577)
T KOG0642|consen 523 ILHSMVAHKDSVTSLAIDPNGPYLMSGS-HDGSVRLWKLDVKTCVL 567 (577)
T ss_pred cchheeeccceecceeecCCCceEEeec-CCceeehhhccchheee
Confidence 9999999999999999999999999999 99999999998776654
No 147
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.88 E-value=5.7e-21 Score=154.15 Aligned_cols=225 Identities=17% Similarity=0.282 Sum_probs=153.1
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
+.....|.+.|..+.|.|....|++++.|.++++||+++..+.. ..+.++|...|.++||.|.
T Consensus 93 lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G---------------~~~~~GH~~SvkS~cf~~~-- 155 (720)
T KOG0321|consen 93 LKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVG---------------GRLNLGHTGSVKSECFMPT-- 155 (720)
T ss_pred hcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeec---------------ceeecccccccchhhhccC--
Confidence 44667899999999999966789999999999999998664421 1156788899999999876
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeee-------EEee---------------cccccccccceEE---EEECCCCcE
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLR-------CTYR---------------AYDAVDEITAAFS---VAFNPTGTK 187 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-------~~~~---------------~~~~~~~~~~v~~---i~~~~~~~~ 187 (304)
+...|++|+.||.|.|||++-.... .... .+....+...+.+ +.+..|...
T Consensus 156 ----n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~t 231 (720)
T KOG0321|consen 156 ----NPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDEST 231 (720)
T ss_pred ----CCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccce
Confidence 4458999999999999999742200 0000 0000011123333 455567777
Q ss_pred EE-EE-cCCeEEEEEcCCCCccceeeeeeecccccc---ccceeEEEeecCCCcEEEEEecCCeEEEEecCCc--eEeEE
Q 022019 188 IF-AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQ---AGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM--ELLYV 260 (304)
Q Consensus 188 l~-~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~--~~~~~ 260 (304)
|+ +| .|+.|+|||++......+....-......+ ...+.++..+. .|.+|++.+.|+.|++|++... .++..
T Consensus 232 laSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDs-sGt~L~AsCtD~sIy~ynm~s~s~sP~~~ 310 (720)
T KOG0321|consen 232 LASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDS-SGTYLFASCTDNSIYFYNMRSLSISPVAE 310 (720)
T ss_pred eeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecC-CCCeEEEEecCCcEEEEeccccCcCchhh
Confidence 77 56 699999999998644332211111111112 33467777777 4455555566999999999864 36666
Q ss_pred eccccCC--eEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 261 LHGQEGG--VTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 261 ~~~~~~~--v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
+.++... -..-..+||+.+|++|+ .|...++|.+.+.+.
T Consensus 311 ~sg~~~~sf~vks~lSpd~~~l~SgS-sd~~ayiw~vs~~e~ 351 (720)
T KOG0321|consen 311 FSGKLNSSFYVKSELSPDDCSLLSGS-SDEQAYIWVVSSPEA 351 (720)
T ss_pred ccCcccceeeeeeecCCCCceEeccC-CCcceeeeeecCccC
Confidence 6655432 12234689999999999 999999999987643
No 148
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=1.5e-19 Score=146.93 Aligned_cols=210 Identities=19% Similarity=0.244 Sum_probs=162.6
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
...--..+|.+|+|+.+.+.||.+-.||.|-+|++..+-. ....+..+....+..++|.
T Consensus 20 f~d~~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~---------------~~~vi~g~~drsIE~L~W~------ 78 (691)
T KOG2048|consen 20 FVDYKPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWF---------------LEPVIHGPEDRSIESLAWA------ 78 (691)
T ss_pred EEeeeccceEEEEEeccCCceeeeccCCcEEEEccCCCce---------------eeEEEecCCCCceeeEEEc------
Confidence 4445577899999999999999999999999999985321 1222444556789999993
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
++..|++.+.+|.|.-||+.+++....+...+. .|++++.+|.+..+++| .||.++.++.... . ..
T Consensus 79 --e~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg-----~IWsiai~p~~~~l~IgcddGvl~~~s~~p~--~----I~ 145 (691)
T KOG2048|consen 79 --EGGRLFSSGLSGSITEWDLHTLKQKYNIDSNGG-----AIWSIAINPENTILAIGCDDGVLYDFSIGPD--K----IT 145 (691)
T ss_pred --cCCeEEeecCCceEEEEecccCceeEEecCCCc-----ceeEEEeCCccceEEeecCCceEEEEecCCc--e----EE
Confidence 456788899999999999999998888776665 99999999999999977 8997777766542 1 12
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec--------cccCCeEEEEECCCCcEEEEeec
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH--------GQEGGVTHVQFSRDGNYLYTGGR 285 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~ 285 (304)
....+....+.+.+++|+| .+..+++|+.||.|++||...+..+.... +...-|+++.|-.++ .|++|.
T Consensus 146 ~~r~l~rq~sRvLslsw~~-~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgD- 222 (691)
T KOG2048|consen 146 YKRSLMRQKSRVLSLSWNP-TGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIASGD- 222 (691)
T ss_pred EEeecccccceEEEEEecC-CccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC-cEEEec-
Confidence 2222234467899999999 77789999999999999999887766221 122347888887665 588888
Q ss_pred cCCeEEEEecccceee
Q 022019 286 KDPYILCWDLRKAVQV 301 (304)
Q Consensus 286 ~d~~i~vwd~~~~~~~ 301 (304)
.-|+|.+||...+..+
T Consensus 223 S~G~V~FWd~~~gTLi 238 (691)
T KOG2048|consen 223 SAGTVTFWDSIFGTLI 238 (691)
T ss_pred CCceEEEEcccCcchh
Confidence 8999999999888654
No 149
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.87 E-value=7.2e-20 Score=149.08 Aligned_cols=223 Identities=14% Similarity=0.231 Sum_probs=168.9
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
+++.+|...+...+ .+++|++.|.|++|+.||+.||+|+.|+.|.+|+..-.. .+
T Consensus 34 rlliyD~ndG~llq------tLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG-------------------~L 88 (1081)
T KOG1538|consen 34 RLLVYDTSDGTLLQ------PLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEG-------------------IL 88 (1081)
T ss_pred EEEEEeCCCccccc------ccccccceEEEEEEccCCceeccCCCceeEEEecccccc-------------------ee
Confidence 56677777776666 788999999999999999999999999999999865322 25
Q ss_pred EeecCCeEEEEeecCcc--------------------------------ceeCCCccEEEEEeCCCCEEEEEcCCCeeeE
Q 022019 115 VVTEGESVYDFCWFPHM--------------------------------SASDPTSCVFASTTRDHPIHLWDATTGLLRC 162 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~--------------------------------~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 162 (304)
...|+..+.++.|+|.. .+++.||++++.|-.+|+|.+-+- .++...
T Consensus 89 kYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~ 167 (1081)
T KOG1538|consen 89 KYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNK-NGEEKV 167 (1081)
T ss_pred eeccCCeeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecC-CCCcce
Confidence 56677777777776631 355779999999999999999874 455444
Q ss_pred EeecccccccccceEEEEECCCC-----cEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCc
Q 022019 163 TYRAYDAVDEITAAFSVAFNPTG-----TKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTG 236 (304)
Q Consensus 163 ~~~~~~~~~~~~~v~~i~~~~~~-----~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 236 (304)
.+.-++ +..++|++++|+|.. ..+++. -..++.+|.+... .........-...|+.+.| +|.
T Consensus 168 ~I~Rpg--g~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~---------~Igk~r~L~FdP~CisYf~-NGE 235 (1081)
T KOG1538|consen 168 KIERPG--GSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGK---------QIGKDRALNFDPCCISYFT-NGE 235 (1081)
T ss_pred EEeCCC--CCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecce---------eecccccCCCCchhheecc-CCc
Confidence 444433 233489999999963 345543 6677778777531 1111122223356889999 788
Q ss_pred EEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 237 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
+++.|+.|+.+++|- +.|-.+.++-....+|+.+...|++.+++.|+ .||+|-.|++-.
T Consensus 236 y~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GC-qDGTiACyNl~f 294 (1081)
T KOG1538|consen 236 YILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGC-QDGTIACYNLIF 294 (1081)
T ss_pred EEEEccCCCceEEEe-ecCeEEeeccccceeEEEEEEccCCceEEEEE-ccCeeehhhhHH
Confidence 999999999999997 46777777776788999999999999999999 999999998743
No 150
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=7.6e-20 Score=142.42 Aligned_cols=205 Identities=17% Similarity=0.175 Sum_probs=154.6
Q ss_pred CCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (304)
.-.++|++|.|+|....|++|+.||+++||.++...- . ... -..-...++.+.+| .|+
T Consensus 211 ps~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N-~-------------~lq-S~~l~~fPi~~a~f-------~p~ 268 (514)
T KOG2055|consen 211 PSHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVN-P-------------KLQ-SIHLEKFPIQKAEF-------APN 268 (514)
T ss_pred cCcCCceEEEecCCCceEEEecCCCcEEEEEecCccC-h-------------hhe-eeeeccCccceeee-------cCC
Confidence 3467899999999999999999999999999873311 1 111 11122356666666 668
Q ss_pred cc-EEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCCccceeeeeee
Q 022019 138 SC-VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLK 215 (304)
Q Consensus 138 ~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~ 215 (304)
|. .+++++....++.||+.+.+....-+.... ....+..+..+|++++|+ .|..|.|.+....+.. .+..
T Consensus 269 G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~--e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~e----li~s-- 340 (514)
T KOG2055|consen 269 GHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGV--EEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKE----LITS-- 340 (514)
T ss_pred CceEEEecccceEEEEeeccccccccccCCCCc--ccchhheeEecCCCCeEEEcccCceEEeehhhhhh----hhhe--
Confidence 87 899999999999999988776544333221 123677899999999999 6799999999887631 1111
Q ss_pred ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccC-CeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEG-GVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 216 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
....+.+..++|+. ++..|++++.+|.|.+||++...++..+....+ .-++++.+++|.|||+|+ ..|.|.|||
T Consensus 341 ---~KieG~v~~~~fsS-dsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS-~~GiVNIYd 415 (514)
T KOG2055|consen 341 ---FKIEGVVSDFTFSS-DSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGS-DSGIVNIYD 415 (514)
T ss_pred ---eeeccEEeeEEEec-CCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEecc-CcceEEEec
Confidence 12356699999998 667888888899999999999999988873221 236788889999999999 999999999
Q ss_pred ccc
Q 022019 295 LRK 297 (304)
Q Consensus 295 ~~~ 297 (304)
..+
T Consensus 416 ~~s 418 (514)
T KOG2055|consen 416 GNS 418 (514)
T ss_pred cch
Confidence 654
No 151
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.87 E-value=2.2e-20 Score=155.08 Aligned_cols=157 Identities=17% Similarity=0.252 Sum_probs=130.9
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCCcccee
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~ 210 (304)
++.++.|++.+.|+..|.|-+|++.+|-....+.. ...|..+|++++.+.-++.++ +|.+|-+++||+....
T Consensus 454 v~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~--~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~----- 526 (910)
T KOG1539|consen 454 VCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGD--SPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKV----- 526 (910)
T ss_pred EEEeccCceEEEeccCCeEEEEEcccCeeeccccc--CccccCceeEEEecCCCceEEEccCcceEEEEecCCcc-----
Confidence 45678899999999999999999999987777631 123444999999999888888 5599999999997631
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeE
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYI 290 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i 290 (304)
+... -.-...+.++..+. ...+++++..|-.|+++|..+.+.+..|.+|...|++++|||||++|++++ .|++|
T Consensus 527 ---l~~~-l~l~~~~~~iv~hr-~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisas-mD~tI 600 (910)
T KOG1539|consen 527 ---LKKS-LRLGSSITGIVYHR-VSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISAS-MDSTI 600 (910)
T ss_pred ---eeee-eccCCCcceeeeee-hhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEee-cCCcE
Confidence 1111 11234477888888 667899999999999999999999999999999999999999999999999 99999
Q ss_pred EEEecccceee
Q 022019 291 LCWDLRKAVQV 301 (304)
Q Consensus 291 ~vwd~~~~~~~ 301 (304)
++||+-++.++
T Consensus 601 r~wDlpt~~lI 611 (910)
T KOG1539|consen 601 RTWDLPTGTLI 611 (910)
T ss_pred EEEeccCccee
Confidence 99999998765
No 152
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.86 E-value=3.6e-20 Score=144.19 Aligned_cols=224 Identities=13% Similarity=0.184 Sum_probs=167.0
Q ss_pred eeeecCCCcccccccceeeeecCC-CCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 36 LIRFDVPPHRTYHFYNQFRTSSIP-NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~h-~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
.+.||+...+..... ...++ ...+.....+|++++|+..+..|-|.|....+++....+
T Consensus 282 ~ysyDle~ak~~k~~----~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~---------------- 341 (514)
T KOG2055|consen 282 LYSYDLETAKVTKLK----PPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSF---------------- 341 (514)
T ss_pred EEEeecccccccccc----CCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhhee----------------
Confidence 456777655444321 22233 356778899999999999999999999988777654332
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d 193 (304)
.-...|.+++| +.+++.|++++.+|.|.+||++...+...+...+.. .-++++.++++.++|+| ..
T Consensus 342 --KieG~v~~~~f-------sSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v----~gts~~~S~ng~ylA~GS~~ 408 (514)
T KOG2055|consen 342 --KIEGVVSDFTF-------SSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSV----HGTSLCISLNGSYLATGSDS 408 (514)
T ss_pred --eeccEEeeEEE-------ecCCcEEEEEcCCceEEEEecCCcceEEEEeecCcc----ceeeeeecCCCceEEeccCc
Confidence 23367888887 678899999999999999999999888888765532 34678888999999988 88
Q ss_pred CeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEec--CCeEEEEecCCceEeEEeccc---cCCe
Q 022019 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY--SQTSAIYREDNMELLYVLHGQ---EGGV 268 (304)
Q Consensus 194 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~---~~~v 268 (304)
|-|.|||..+.-... ...+..........|+++.|+| +..+||.+|. ...+++..+.+......+... -+.|
T Consensus 409 GiVNIYd~~s~~~s~--~PkPik~~dNLtt~Itsl~Fn~-d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~v 485 (514)
T KOG2055|consen 409 GIVNIYDGNSCFAST--NPKPIKTVDNLTTAITSLQFNH-DAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHV 485 (514)
T ss_pred ceEEEeccchhhccC--CCCchhhhhhhheeeeeeeeCc-chhhhhhhhhccccceEEEeccceeeeccCCCCCCcccce
Confidence 999999975421100 0111111233445699999999 7788888876 567999998887777666533 2469
Q ss_pred EEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 269 THVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 269 ~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
+|++|+|.|.+|+.|. .+|.+.+|.+.
T Consensus 486 tc~aFSP~sG~lAvGN-e~grv~l~kL~ 512 (514)
T KOG2055|consen 486 TCMAFSPNSGYLAVGN-EAGRVHLFKLH 512 (514)
T ss_pred EEEEecCCCceEEeec-CCCceeeEeec
Confidence 9999999999999999 99999999874
No 153
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.86 E-value=4.3e-19 Score=139.87 Aligned_cols=232 Identities=18% Similarity=0.257 Sum_probs=158.9
Q ss_pred ccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcccccccc------c-
Q 022019 31 EYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACS------L- 103 (304)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~------~- 103 (304)
+....+..|+....+... ....|++.|.+++...+|.+ ++|+.|+.|..||-. -....+...+. .
T Consensus 264 DS~G~i~Iw~~~~~~~~k------~~~aH~ggv~~L~~lr~Gtl-lSGgKDRki~~Wd~~-y~k~r~~elPe~~G~iRtv 335 (626)
T KOG2106|consen 264 DSGGNILIWSKGTNRISK------QVHAHDGGVFSLCMLRDGTL-LSGGKDRKIILWDDN-YRKLRETELPEQFGPIRTV 335 (626)
T ss_pred cCCceEEEEeCCCceEEe------EeeecCCceEEEEEecCccE-eecCccceEEecccc-ccccccccCchhcCCeeEE
Confidence 344456677763333222 33389999999999999965 459999999999932 11111111000 0
Q ss_pred cc-----------------cCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeec
Q 022019 104 AK-----------------DQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRA 166 (304)
Q Consensus 104 ~~-----------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 166 (304)
.. .-..........|+.....++- .|+.+.+++++.|+.+++|+ ..++..+...
T Consensus 336 ~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~-------hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~ 406 (626)
T KOG2106|consen 336 AEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLAT-------HPSKNQLLTCGQDKHVRLWN--DHKLEWTKII 406 (626)
T ss_pred ecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEc-------CCChhheeeccCcceEEEcc--CCceeEEEEe
Confidence 00 0011122233444555555544 67888999999999999999 4455544444
Q ss_pred ccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCC
Q 022019 167 YDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ 245 (304)
Q Consensus 167 ~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg 245 (304)
.. ++.++.|+|.| .+++| ..|...+.|.++. .+...... ..++++++|+| ++.+||+|+.|+
T Consensus 407 ~d------~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~--------~lv~~~~d-~~~ls~v~ysp-~G~~lAvgs~d~ 469 (626)
T KOG2106|consen 407 ED------PAECADFHPSG-VVAVGTATGRWFVLDTETQ--------DLVTIHTD-NEQLSVVRYSP-DGAFLAVGSHDN 469 (626)
T ss_pred cC------ceeEeeccCcc-eEEEeeccceEEEEecccc--------eeEEEEec-CCceEEEEEcC-CCCEEEEecCCC
Confidence 33 78899999999 77776 9999999999862 11111122 67799999999 788999999999
Q ss_pred eEEEEecCCc-eEeEEec-cccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 246 TSAIYREDNM-ELLYVLH-GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 246 ~i~i~d~~~~-~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
.|+||.+... ....... .+..+|+.+.|++|+++|.+-+ .|-.|..|....
T Consensus 470 ~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S-~d~eiLyW~~~~ 522 (626)
T KOG2106|consen 470 HIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNS-GDYEILYWKPSE 522 (626)
T ss_pred eEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEecc-CceEEEEEcccc
Confidence 9999988654 3322222 2347999999999999999999 899999995443
No 154
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.86 E-value=6.1e-20 Score=149.54 Aligned_cols=255 Identities=18% Similarity=0.313 Sum_probs=179.9
Q ss_pred hhhcHHhhccccccCcceeeecCCC-------------ccccccccee-------eeecCCCCceeEEEEcCCCCeEEEe
Q 022019 19 TEVTEAAQENQQEYTWPLIRFDVPP-------------HRTYHFYNQF-------RTSSIPNNFLKGIKWSPDGSSFLTS 78 (304)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~-------~~~~~h~~~V~~i~~s~~~~~l~s~ 78 (304)
.-+..++++|.-.++|++..++... ...+.....+ ..+.||.+.|.++.|.|.+..|+++
T Consensus 206 ~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSA 285 (764)
T KOG1063|consen 206 DLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSA 285 (764)
T ss_pred cEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhheec
Confidence 4456778899999999998888322 0011111111 2345999999999999999999999
Q ss_pred cCCCeEEEeeCCCCCCccccccccccccCCccceEEEee----cCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEE
Q 022019 79 SEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVT----EGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWD 154 (304)
Q Consensus 79 ~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d 154 (304)
+.|.++.+|...+..-. .+....++ .....+...| +|+++.+++-+..|-.++|.
T Consensus 286 SaDksmiiW~pd~~tGi--------------Wv~~vRlGe~gg~a~GF~g~lw-------~~n~~~ii~~g~~Gg~hlWk 344 (764)
T KOG1063|consen 286 SADKSMIIWKPDENTGI--------------WVDVVRLGEVGGSAGGFWGGLW-------SPNSNVIIAHGRTGGFHLWK 344 (764)
T ss_pred ccCcceEEEecCCccce--------------EEEEEEeecccccccceeeEEE-------cCCCCEEEEecccCcEEEEe
Confidence 99999999987644211 11111111 1123566666 77888999999999999998
Q ss_pred cCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCCcccee-----------------------
Q 022019 155 ATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEK----------------------- 210 (304)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~----------------------- 210 (304)
......-.... ...+|...|.+++|+|.|.+|+ +|.|-+-++|-.-..+.....
T Consensus 345 t~d~~~w~~~~--~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~F 422 (764)
T KOG1063|consen 345 TKDKTFWTQEP--VISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQF 422 (764)
T ss_pred ccCccceeecc--ccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCcee
Confidence 33222111111 1225666999999999999998 678888877643200000000
Q ss_pred ------------------------------------------------------------------eeee----------
Q 022019 211 ------------------------------------------------------------------YSTL---------- 214 (304)
Q Consensus 211 ------------------------------------------------------------------~~~~---------- 214 (304)
....
T Consensus 423 VSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~e 502 (764)
T KOG1063|consen 423 VSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTE 502 (764)
T ss_pred eecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccC
Confidence 0000
Q ss_pred ---------------eccccccccceeEEEeecCCCcEEEEEecCC-----eEEEEecCCceEeEEeccccCCeEEEEEC
Q 022019 215 ---------------KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ-----TSAIYREDNMELLYVLHGQEGGVTHVQFS 274 (304)
Q Consensus 215 ---------------~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 274 (304)
.....+|...|++++.+| .++++|+++... .|++|+..+...+..+.+|.-.|+.++||
T Consensus 503 PP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~-~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FS 581 (764)
T KOG1063|consen 503 PPTEDQLQQNTLWPEVHKLYGHGYEVYALAISP-TGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFS 581 (764)
T ss_pred CChHHHHHHhccchhhHHhccCceeEEEEEecC-CCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEEC
Confidence 013456777799999999 888999998653 59999999999999999999999999999
Q ss_pred CCCcEEEEeeccCCeEEEEecccc
Q 022019 275 RDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 275 ~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
|||++|++++ .|.++.+|+....
T Consensus 582 pdg~~LLsvs-RDRt~sl~~~~~~ 604 (764)
T KOG1063|consen 582 PDGRYLLSVS-RDRTVSLYEVQED 604 (764)
T ss_pred CCCcEEEEee-cCceEEeeeeecc
Confidence 9999999999 9999999988554
No 155
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.86 E-value=2.9e-19 Score=135.59 Aligned_cols=225 Identities=16% Similarity=0.189 Sum_probs=158.1
Q ss_pred CCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcccc--------------ccccc-cccCCccceEEEeecCCeEEE
Q 022019 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDV--------------NACSL-AKDQDSYEASLVVTEGESVYD 124 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~--------------~~~~~-~~~~~~~~~~~~~~~~~~v~~ 124 (304)
...+..+.|+.+...|..|+.|| -++|+.......... ..... ...+......+.......+..
T Consensus 5 ~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk~~~ICe 83 (391)
T KOG2110|consen 5 KPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFSSSLVAIVSIKQPRKLKVVHFKKKTTICE 83 (391)
T ss_pred CcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeecccceeEEEecCCCceEEEEEcccCceEEE
Confidence 34577778998888888888887 478876543221000 00000 011112222233333333444
Q ss_pred EeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE--EE-cCCeEEEEEc
Q 022019 125 FCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF--AG-YNKSVRVFDV 201 (304)
Q Consensus 125 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~--~~-~d~~i~v~d~ 201 (304)
+.|....+++--+.+.|+++-++. |+|||+++.+.+.++.... .+...+..+++++.+.+++ .+ ..|.|.+||+
T Consensus 84 ~~fpt~IL~VrmNr~RLvV~Lee~-IyIydI~~MklLhTI~t~~--~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~ 160 (391)
T KOG2110|consen 84 IFFPTSILAVRMNRKRLVVCLEES-IYIYDIKDMKLLHTIETTP--PNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDT 160 (391)
T ss_pred EecCCceEEEEEccceEEEEEccc-EEEEecccceeehhhhccC--CCccceEeeccCCCCceEEecCCCCCceEEEEEc
Confidence 444333333334666788777665 9999999999888876542 2233677788888888998 45 7899999999
Q ss_pred CCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCe-EEEEecCCceEeEEecccc--CCeEEEEECCCCc
Q 022019 202 HRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQT-SAIYREDNMELLYVLHGQE--GGVTHVQFSRDGN 278 (304)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~--~~v~~~~~~~~~~ 278 (304)
..- ........|.+.+.+++|+| +|.+||++|+.|+ ||||.+.+++.+.+|+... ..|.+++|+|++.
T Consensus 161 ~nl--------~~v~~I~aH~~~lAalafs~-~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~ 231 (391)
T KOG2110|consen 161 INL--------QPVNTINAHKGPLAALAFSP-DGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQ 231 (391)
T ss_pred ccc--------eeeeEEEecCCceeEEEECC-CCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCC
Confidence 762 22233368999999999999 8889999999998 7999999999999998433 3689999999999
Q ss_pred EEEEeeccCCeEEEEecccc
Q 022019 279 YLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 279 ~l~~~~~~d~~i~vwd~~~~ 298 (304)
+|++.+ ..++|++|.++..
T Consensus 232 ~L~~sS-~TeTVHiFKL~~~ 250 (391)
T KOG2110|consen 232 FLAASS-NTETVHIFKLEKV 250 (391)
T ss_pred eEEEec-CCCeEEEEEeccc
Confidence 999999 8999999998764
No 156
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.86 E-value=3.9e-20 Score=143.82 Aligned_cols=238 Identities=14% Similarity=0.084 Sum_probs=163.7
Q ss_pred ccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccC
Q 022019 29 QQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQ 107 (304)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~ 107 (304)
.+++...+..|++.....-. ..+..+.+|..+|.+|.|+| +...+++.++||+|++-|++......-....
T Consensus 205 ~GdK~G~VG~Wn~~~~~~d~--d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~------ 276 (498)
T KOG4328|consen 205 VGDKGGQVGLWNFGTQEKDK--DGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLD------ 276 (498)
T ss_pred EccCCCcEEEEecCCCCCcc--CceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcC------
Confidence 34445566777773211111 12336789999999999999 5668999999999999999865331111100
Q ss_pred CccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCee-eEEeecccccccccceEEEEECCCCc
Q 022019 108 DSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLL-RCTYRAYDAVDEITAAFSVAFNPTGT 186 (304)
Q Consensus 108 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~~~v~~i~~~~~~~ 186 (304)
.....+..+. |+.+...++.+..=|...+||++++.. ...+..|.. .|.+++++|...
T Consensus 277 ---------~d~~~fs~~d-------~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~k-----KI~sv~~NP~~p 335 (498)
T KOG4328|consen 277 ---------TDNIWFSSLD-------FSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKK-----KITSVALNPVCP 335 (498)
T ss_pred ---------ccceeeeecc-------ccCCCccEEEeecccceEEEEeecCCccchhhhhhhc-----ccceeecCCCCc
Confidence 0111223333 355666677777767899999997654 344555544 899999999765
Q ss_pred E-EEE-EcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC----CceEeEE
Q 022019 187 K-IFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED----NMELLYV 260 (304)
Q Consensus 187 ~-l~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~----~~~~~~~ 260 (304)
+ +++ |.|++.+|||+|....... . ......|...|.+..|+|.++. |++.+.|..|+|||.. ...+..+
T Consensus 336 ~~laT~s~D~T~kIWD~R~l~~K~s---p-~lst~~HrrsV~sAyFSPs~gt-l~TT~~D~~IRv~dss~~sa~~~p~~~ 410 (498)
T KOG4328|consen 336 WFLATASLDQTAKIWDLRQLRGKAS---P-FLSTLPHRRSVNSAYFSPSGGT-LLTTCQDNEIRVFDSSCISAKDEPLGT 410 (498)
T ss_pred hheeecccCcceeeeehhhhcCCCC---c-ceecccccceeeeeEEcCCCCc-eEeeccCCceEEeecccccccCCccce
Confidence 4 444 4999999999987543322 1 1122568888999999997776 8999999999999983 3345555
Q ss_pred eccccC------CeEEEEECCCCcEEEEeeccCCeEEEEecccceeee
Q 022019 261 LHGQEG------GVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 261 ~~~~~~------~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
+. |.. ......|.|+..++++|. .-..|-|+|-..++.++
T Consensus 411 I~-Hn~~t~RwlT~fKA~W~P~~~li~vg~-~~r~IDv~~~~~~q~v~ 456 (498)
T KOG4328|consen 411 IP-HNNRTGRWLTPFKAAWDPDYNLIVVGR-YPRPIDVFDGNGGQMVC 456 (498)
T ss_pred ee-ccCcccccccchhheeCCCccEEEEec-cCcceeEEcCCCCEEee
Confidence 54 332 245578999999999998 88899999998887443
No 157
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.86 E-value=5.3e-20 Score=148.64 Aligned_cols=243 Identities=16% Similarity=0.199 Sum_probs=157.2
Q ss_pred eeecCCCcccccccceeeeecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccc--ccccc-----c---cc
Q 022019 37 IRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYD--VNACS-----L---AK 105 (304)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~--~~~~~-----~---~~ 105 (304)
..|++....... .+.+.||.+.|.+++|.| +...|++|+.||.|.|||+........ ..... . ..
T Consensus 125 r~Wdvk~s~l~G----~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptps 200 (720)
T KOG0321|consen 125 RPWDVKTSRLVG----GRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPS 200 (720)
T ss_pred eeeeeccceeec----ceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCC
Confidence 345555544433 124679999999999999 556899999999999999976542100 00000 0 00
Q ss_pred cCCccceEEEeecCCe----EEEEeecCccceeCCCccEEEEEeC-CCCEEEEEcCCCeeeE------Eeeccccccccc
Q 022019 106 DQDSYEASLVVTEGES----VYDFCWFPHMSASDPTSCVFASTTR-DHPIHLWDATTGLLRC------TYRAYDAVDEIT 174 (304)
Q Consensus 106 ~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~------~~~~~~~~~~~~ 174 (304)
............+... |+.+.| .|...||+++. |+.|+|||++...... ....+.......
T Consensus 201 kp~~kr~~k~kA~s~ti~ssvTvv~f--------kDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~ 272 (720)
T KOG0321|consen 201 KPLKKRIRKWKAASNTIFSSVTVVLF--------KDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSV 272 (720)
T ss_pred chhhccccccccccCceeeeeEEEEE--------eccceeeeccCCCcceEEEeecccccccccCCCcccCccCccccee
Confidence 0000111111222222 333333 47778999887 9999999998754322 222222212233
Q ss_pred ceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccc--cceeEEEeecCCCcEEEEEecCCeEEEEe
Q 022019 175 AAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQA--GIMSAIAFSPTHTGMLAIGSYSQTSAIYR 251 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~p~~~~~l~~~~~dg~i~i~d 251 (304)
.+.++..+..|.+++++ .|+.|++|++...+.... ..+ .++. .....-..+| ++.++++|+.|...++|.
T Consensus 273 G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~--~~~----sg~~~~sf~vks~lSp-d~~~l~SgSsd~~ayiw~ 345 (720)
T KOG0321|consen 273 GQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPV--AEF----SGKLNSSFYVKSELSP-DDCSLLSGSSDEQAYIWV 345 (720)
T ss_pred eeEEEEecCCCCeEEEEecCCcEEEEeccccCcCch--hhc----cCcccceeeeeeecCC-CCceEeccCCCcceeeee
Confidence 67889999999998865 999999999986432111 111 1111 1122334678 778999999999999999
Q ss_pred cCCce-EeEEeccccCCeEEEEECCCC-cEEEEeeccCCeEEEEecccce
Q 022019 252 EDNME-LLYVLHGQEGGVTHVQFSRDG-NYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 252 ~~~~~-~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
+.+.+ +...+.+|.-.|++++|.|.. .-+++++ +|-.+++|++.++-
T Consensus 346 vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcS-dD~~~kiW~l~~~l 394 (720)
T KOG0321|consen 346 VSSPEAPPALLLGHTREVTTVRWLPSATTPVATCS-DDFRVKIWRLSNGL 394 (720)
T ss_pred ecCccCChhhhhCcceEEEEEeeccccCCCceeec-cCcceEEEeccCch
Confidence 98765 566778999999999998753 3367778 99999999997653
No 158
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.85 E-value=8.9e-20 Score=140.56 Aligned_cols=201 Identities=23% Similarity=0.304 Sum_probs=150.4
Q ss_pred eEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEE
Q 022019 64 KGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFAS 143 (304)
Q Consensus 64 ~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~ 143 (304)
.+++|+++|..|++++.||++|||++....... ....|...|.++.| +|||+.|++
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l-----------------~e~~~~~eV~DL~F-------S~dgk~las 203 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTIL-----------------EEIAHHAEVKDLDF-------SPDGKFLAS 203 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhh-----------------hhHhhcCcccccee-------CCCCcEEEE
Confidence 679999999999999999999999976443322 22345578888877 889999999
Q ss_pred EeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCC---c-EEEEE--cCCeEEEEEcCCCCccceeeeeeecc
Q 022019 144 TTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG---T-KIFAG--YNKSVRVFDVHRPGRDFEKYSTLKGN 217 (304)
Q Consensus 144 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~---~-~l~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~ 217 (304)
.+.| ..+||+++++..+........ ......+.|+.++ . ++++. ..+.|+.||+...... . +......
T Consensus 204 ig~d-~~~VW~~~~g~~~a~~t~~~k---~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~-~-~l~~~~~ 277 (398)
T KOG0771|consen 204 IGAD-SARVWSVNTGAALARKTPFSK---DEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGS-N-FLRLRKK 277 (398)
T ss_pred ecCC-ceEEEEeccCchhhhcCCccc---chhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccc-c-ccchhhh
Confidence 9999 899999999976665553221 1245577887766 2 33333 5677888887543221 0 0111111
Q ss_pred ccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec-cccCCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 218 KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH-GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 218 ~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
......|++++.++ ++++++.|+.||.|.|++..+.+.+.-++ .|...|+.+.|+||.+++++.+ .|..+.|..+.
T Consensus 278 -~~~~~siSsl~VS~-dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svS-s~~~~~v~~l~ 354 (398)
T KOG0771|consen 278 -IKRFKSISSLAVSD-DGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVS-SDNEAAVTKLA 354 (398)
T ss_pred -hhccCcceeEEEcC-CCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccc-cCCceeEEEEe
Confidence 11233599999999 88899999999999999999888777665 7889999999999999999998 89988888775
Q ss_pred c
Q 022019 297 K 297 (304)
Q Consensus 297 ~ 297 (304)
-
T Consensus 355 v 355 (398)
T KOG0771|consen 355 V 355 (398)
T ss_pred e
Confidence 4
No 159
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.85 E-value=4.2e-19 Score=147.41 Aligned_cols=241 Identities=18% Similarity=0.162 Sum_probs=167.3
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (304)
..+.|++........ .+ .-...|+|++|+| +..++|.|+.+|.|.+||+....... ......
T Consensus 223 ~~~vW~~~~p~~Pe~-----~~-~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~-----------~s~ls~ 285 (555)
T KOG1587|consen 223 VLLVWSLKNPNTPEL-----VL-ESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTP-----------PSGLSA 285 (555)
T ss_pred eEEEEecCCCCCceE-----EE-ecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCC-----------Cccccc
Confidence 466777765532221 11 2467899999999 77789999999999999998664421 122233
Q ss_pred EEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeee-EEeecc------cccccccceEEEEECCCC-
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLR-CTYRAY------DAVDEITAAFSVAFNPTG- 185 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~------~~~~~~~~v~~i~~~~~~- 185 (304)
....|..++..+.|.. ++.+.-|++++.||.|..|+++.-... ...... ........+++++|.+..
T Consensus 286 ~~~sh~~~v~~vvW~~-----~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p 360 (555)
T KOG1587|consen 286 LEVSHSEPVTAVVWLQ-----NEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDP 360 (555)
T ss_pred ccccCCcCeEEEEEec-----cCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCC
Confidence 5566778999999965 333456999999999999988753321 111110 011222378899999854
Q ss_pred cEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC-CceEeEEecc
Q 022019 186 TKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED-NMELLYVLHG 263 (304)
Q Consensus 186 ~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~ 263 (304)
..+++| .+|.|.--+-...................|.++|+++.++|-...++++++ |.+++||... ...++..+..
T Consensus 361 ~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~ 439 (555)
T KOG1587|consen 361 NHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDS 439 (555)
T ss_pred ceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcchhhhh
Confidence 444466 889887744332222221222333344678899999999997776777666 9999999988 7778888888
Q ss_pred ccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 264 QEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 264 ~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
+...|++++|||-..-++.+...||.|.+||+...
T Consensus 440 ~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~ 474 (555)
T KOG1587|consen 440 SPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQD 474 (555)
T ss_pred ccceeeeeEEcCcCceEEEEEcCCCceehhhhhcc
Confidence 88889999999988776666648999999999653
No 160
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.85 E-value=3.6e-20 Score=147.42 Aligned_cols=224 Identities=16% Similarity=0.245 Sum_probs=159.4
Q ss_pred eeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 52 QFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 52 ~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
.-+.+.||.+.|+|+.|+.+|.+|++|+.|-.+.|||....+. .-.+..+|...|.++.|.|.
T Consensus 42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~Kl----------------lhsI~TgHtaNIFsvKFvP~- 104 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKL----------------LHSISTGHTANIFSVKFVPY- 104 (758)
T ss_pred hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcce----------------eeeeecccccceeEEeeecc-
Confidence 3447889999999999999999999999999999999864332 33366678899999999884
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEcCCCe----------eeEEeecccccccccceEEEEECCCCcE-EE-EEcCCeEEEE
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDATTGL----------LRCTYRAYDAVDEITAAFSVAFNPTGTK-IF-AGYNKSVRVF 199 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~----------~~~~~~~~~~~~~~~~v~~i~~~~~~~~-l~-~~~d~~i~v~ 199 (304)
.+.+++++|..|..|++||+...+ ....+.. |...|..++-.|++.. +. ++.||+|+-+
T Consensus 105 ----tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~c-----ht~rVKria~~p~~PhtfwsasEDGtirQy 175 (758)
T KOG1310|consen 105 ----TNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSC-----HTDRVKRIATAPNGPHTFWSASEDGTIRQY 175 (758)
T ss_pred ----CCCeEEEeccCcceEEEEecccccccccccCccchhhhhhh-----hhhhhhheecCCCCCceEEEecCCcceeee
Confidence 366789999999999999998521 1112222 3347888999998844 44 5699999999
Q ss_pred EcCCCCccceeeeeee--ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc--------e----------EeE
Q 022019 200 DVHRPGRDFEKYSTLK--GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM--------E----------LLY 259 (304)
Q Consensus 200 d~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~--------~----------~~~ 259 (304)
|++.+-.+........ .......-...++..+|....+|++|+.|-..++||.+.. . ++.
T Consensus 176 DiREph~c~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~ 255 (758)
T KOG1310|consen 176 DIREPHVCNPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVR 255 (758)
T ss_pred cccCCccCCccccccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhh
Confidence 9997432221110000 0001112236789999999999999999999999994311 1 122
Q ss_pred Eec-ccc-----------CCeEEEEECCCCcEEEEeeccCCeEEEEecccceeee
Q 022019 260 VLH-GQE-----------GGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 260 ~~~-~~~-----------~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
.+. +|- ..++.+.|+|+|.-|+..- ....|+++|+..++...
T Consensus 256 yf~p~hlkn~~gn~~~~~~~~t~vtfnpNGtElLvs~-~gEhVYlfdvn~~~~~~ 309 (758)
T KOG1310|consen 256 YFSPGHLKNSQGNLDRYITCCTYVTFNPNGTELLVSW-GGEHVYLFDVNEDKSPT 309 (758)
T ss_pred eecCccccCcccccccceeeeEEEEECCCCcEEEEee-CCeEEEEEeecCCCCce
Confidence 221 221 1257788999998777665 56789999999887654
No 161
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.84 E-value=1.9e-19 Score=141.70 Aligned_cols=200 Identities=15% Similarity=0.232 Sum_probs=150.7
Q ss_pred eeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEE
Q 022019 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV 115 (304)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (304)
+-+||+...... +.+++|.+.|+++.++-...|||+++..|.|.|..+.++....+ +.
T Consensus 103 Vkiwdl~~kl~h------r~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~----------------f~ 160 (673)
T KOG4378|consen 103 VKIWDLRAKLIH------RFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTT----------------FT 160 (673)
T ss_pred eeehhhHHHHHh------hhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccc----------------ee
Confidence 345665533222 36789999999999999999999999999999999987644322 22
Q ss_pred eecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE--EEcC
Q 022019 116 VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF--AGYN 193 (304)
Q Consensus 116 ~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~--~~~d 193 (304)
...+..|.-+.|+|. ...+|.+++++|.|.+||+....+...+.. .|..+...|+|+|.+..|+ +|.|
T Consensus 161 ~~sgqsvRll~ys~s------kr~lL~~asd~G~VtlwDv~g~sp~~~~~~----~HsAP~~gicfspsne~l~vsVG~D 230 (673)
T KOG4378|consen 161 IDSGQSVRLLRYSPS------KRFLLSIASDKGAVTLWDVQGMSPIFHASE----AHSAPCRGICFSPSNEALLVSVGYD 230 (673)
T ss_pred cCCCCeEEEeecccc------cceeeEeeccCCeEEEEeccCCCcccchhh----hccCCcCcceecCCccceEEEeccc
Confidence 233456667777442 234678889999999999987666544321 2334888999999876666 5799
Q ss_pred CeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc-eEeEEeccccCCeEEEE
Q 022019 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM-ELLYVLHGQEGGVTHVQ 272 (304)
Q Consensus 194 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~~~ 272 (304)
..|.+||++.... . .. .....+...++|.+ +|.+|++|+..|.|..||++.. .|+..+..|...|++++
T Consensus 231 kki~~yD~~s~~s-~---~~-----l~y~~Plstvaf~~-~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~va 300 (673)
T KOG4378|consen 231 KKINIYDIRSQAS-T---DR-----LTYSHPLSTVAFSE-CGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVA 300 (673)
T ss_pred ceEEEeecccccc-c---ce-----eeecCCcceeeecC-CceEEEeecCCceEEEEecccCCCCceEeeecccceeEEE
Confidence 9999999985211 1 11 12345688999999 8899999999999999999864 58999999999999999
Q ss_pred ECCCC
Q 022019 273 FSRDG 277 (304)
Q Consensus 273 ~~~~~ 277 (304)
|-|.-
T Consensus 301 fq~s~ 305 (673)
T KOG4378|consen 301 FQPSP 305 (673)
T ss_pred eeecc
Confidence 97654
No 162
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.84 E-value=1.3e-19 Score=131.71 Aligned_cols=150 Identities=17% Similarity=0.305 Sum_probs=114.0
Q ss_pred EEEEEeCCCCEEEEEcCCCeeeEEeeccc-----ccccccceEEEEECCCCcE-EEEEcCCeEEEEEcCCCCccceeeee
Q 022019 140 VFASTTRDHPIHLWDATTGLLRCTYRAYD-----AVDEITAAFSVAFNPTGTK-IFAGYNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~~~~~~v~~i~~~~~~~~-l~~~~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
++++|.++|.+.+||+.++.....++... ...+..+|.++.|.+.-.. +..|.+..+..|.+.........-..
T Consensus 167 lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e 246 (323)
T KOG0322|consen 167 LLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKE 246 (323)
T ss_pred EEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccce
Confidence 47788899999999999875443332211 1234558999999875433 33457788889988754222111111
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEE
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCW 293 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vw 293 (304)
. .-....+..+..-| +++++|+++.|+.||||+.++..++..++-|...|.+++|+|+...+|+++ .|++|.+|
T Consensus 247 ~----~lknpGv~gvrIRp-D~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaas-kD~rISLW 320 (323)
T KOG0322|consen 247 I----TLKNPGVSGVRIRP-DGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAAS-KDARISLW 320 (323)
T ss_pred E----EecCCCccceEEcc-CCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhcc-CCceEEee
Confidence 1 11123377889999 888999999999999999999999999999999999999999999999999 99999999
Q ss_pred ec
Q 022019 294 DL 295 (304)
Q Consensus 294 d~ 295 (304)
++
T Consensus 321 kL 322 (323)
T KOG0322|consen 321 KL 322 (323)
T ss_pred ec
Confidence 86
No 163
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.84 E-value=2.6e-19 Score=134.50 Aligned_cols=197 Identities=13% Similarity=0.193 Sum_probs=145.0
Q ss_pred CeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEE
Q 022019 73 SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHL 152 (304)
Q Consensus 73 ~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 152 (304)
..+|++-..|.|++||..++.....+.... ..+..+.|.. ......+.+|+.||+|++
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~-----------------~~~N~vrf~~-----~ds~h~v~s~ssDG~Vr~ 98 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPP-----------------ATTNGVRFIS-----CDSPHGVISCSSDGTVRL 98 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCC-----------------CcccceEEec-----CCCCCeeEEeccCCeEEE
Confidence 568888889999999999876655444332 3333444421 114457999999999999
Q ss_pred EEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-----cCCeEEEEEcCCCCccceeeeeeeccccccccceeE
Q 022019 153 WDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-----YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSA 227 (304)
Q Consensus 153 ~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-----~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~ 227 (304)
||++.......+...... ..+..+++.+-.++.+++| .+..|.+||+|..... +......|...|++
T Consensus 99 wD~Rs~~e~a~~~~~~~~--~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~------l~~~~eSH~DDVT~ 170 (376)
T KOG1188|consen 99 WDIRSQAESARISWTQQS--GTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQL------LRQLNESHNDDVTQ 170 (376)
T ss_pred EEeecchhhhheeccCCC--CCcceEeeccCcCCeEEeccccccCceEEEEEEeccccch------hhhhhhhccCccee
Confidence 999976555444433221 2266778877778888865 4678999999985432 33334789999999
Q ss_pred EEeecCCCcEEEEEecCCeEEEEecCCce----EeEEeccccCCeEEEEECCCC-cEEEEeeccCCeEEEEecccceee
Q 022019 228 IAFSPTHTGMLAIGSYSQTSAIYREDNME----LLYVLHGQEGGVTHVQFSRDG-NYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 228 ~~~~p~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
++|+|.+..+|++||.||.|.|||+.... ++..+. |...|..+.|..++ +.|.+-+ ..+...+|+++.+.+.
T Consensus 171 lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN-~~sSI~~igw~~~~ykrI~clT-H~Etf~~~ele~~~~~ 247 (376)
T KOG1188|consen 171 LRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVIN-HGSSIHLIGWLSKKYKRIMCLT-HMETFAIYELEDGSEE 247 (376)
T ss_pred EEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhc-ccceeeeeeeecCCcceEEEEE-ccCceeEEEccCCChh
Confidence 99999999999999999999999997543 333443 77789999998877 4577777 8999999999988654
No 164
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.84 E-value=9.7e-19 Score=130.87 Aligned_cols=213 Identities=21% Similarity=0.327 Sum_probs=156.3
Q ss_pred CCCCceeEEEEcCC----CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 58 IPNNFLKGIKWSPD----GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 58 ~h~~~V~~i~~s~~----~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
.|...-..++|+-+ ..++|.|+.-|.|+|.|+.+++... ...+|+..|..+.++|.
T Consensus 87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~-----------------~~~ghG~sINeik~~p~--- 146 (385)
T KOG1034|consen 87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSK-----------------NYRGHGGSINEIKFHPD--- 146 (385)
T ss_pred CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhcc-----------------ceeccCccchhhhcCCC---
Confidence 47777888888753 3488999999999999998654422 45678899999999876
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCCcc-----
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRD----- 207 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~~~----- 207 (304)
..+++++++.|.+|++|++++..++..+-+.. +|...|.++.|+++|.+|+ +|.|..+++|++..++-.
T Consensus 147 ---~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~e--gHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~ 221 (385)
T KOG1034|consen 147 ---RPQLVLSASKDHSVRLWNIQTDVCVAVFGGVE--GHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLEL 221 (385)
T ss_pred ---CCcEEEEecCCceEEEEeccCCeEEEEecccc--cccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhh
Confidence 44699999999999999999999988876554 4666999999999999999 569999999999732100
Q ss_pred ------------ce----eeeee--------------------------------ec-----c----------------c
Q 022019 208 ------------FE----KYSTL--------------------------------KG-----N----------------K 218 (304)
Q Consensus 208 ------------~~----~~~~~--------------------------------~~-----~----------------~ 218 (304)
+. .+..+ .. . .
T Consensus 222 s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~ 301 (385)
T KOG1034|consen 222 SITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEF 301 (385)
T ss_pred hcccCCCCccCcCCccccccccccccccccchHHHHHHHhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEe
Confidence 00 00000 00 0 0
Q ss_pred cccc--cceeEEEeecCCCcEEEEEecCCeEEEEecCCceEe--EEec--cccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 219 EGQA--GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELL--YVLH--GQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 219 ~~~~--~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~--~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
.-.. .+....+|+| -+++|+.|...|.|++||+++..+. .++. .....|...+|+.||..|+..+ +|++|.-
T Consensus 302 ~~~~c~iWfirf~~d~-~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vc-dd~~Vwr 379 (385)
T KOG1034|consen 302 DYPMCDIWFIRFAFDP-WQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVC-DDGTVWR 379 (385)
T ss_pred ccCccceEEEEEeecH-HHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEe-CCCcEEE
Confidence 0000 0122345566 5678999999999999999987653 2222 1234799999999999999999 9999999
Q ss_pred Eeccc
Q 022019 293 WDLRK 297 (304)
Q Consensus 293 wd~~~ 297 (304)
||..+
T Consensus 380 wdrv~ 384 (385)
T KOG1034|consen 380 WDRVS 384 (385)
T ss_pred EEeec
Confidence 98643
No 165
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.83 E-value=4.5e-18 Score=135.89 Aligned_cols=187 Identities=13% Similarity=0.188 Sum_probs=131.5
Q ss_pred CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEE-EEEeCCCCE
Q 022019 72 GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF-ASTTRDHPI 150 (304)
Q Consensus 72 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l-~~~~~dg~i 150 (304)
+..+++++.|+.|++||+.+++... .......+..+.| +|+++.+ ++++.++.|
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~------------------~~~~~~~~~~l~~-------~~dg~~l~~~~~~~~~v 55 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTR------------------TFPVGQRPRGITL-------SKDGKLLYVCASDSDTI 55 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEE------------------EEECCCCCCceEE-------CCCCCEEEEEECCCCeE
Confidence 3578899999999999997653221 1111122334444 7888866 566788999
Q ss_pred EEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-E-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEE
Q 022019 151 HLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-G-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAI 228 (304)
Q Consensus 151 ~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 228 (304)
++||+.+++....+..+. .+..+.|+|+++.+++ + .++.+++||++... .+..+. ....+.++
T Consensus 56 ~~~d~~~~~~~~~~~~~~------~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~----~~~~~~-----~~~~~~~~ 120 (300)
T TIGR03866 56 QVIDLATGEVIGTLPSGP------DPELFALHPNGKILYIANEDDNLVTVIDIETRK----VLAEIP-----VGVEPEGM 120 (300)
T ss_pred EEEECCCCcEEEeccCCC------CccEEEECCCCCEEEEEcCCCCeEEEEECCCCe----EEeEee-----CCCCcceE
Confidence 999999887766554332 3467899999998774 4 68999999997631 111111 12235789
Q ss_pred EeecCCCcEEEEEecCC-eEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 229 AFSPTHTGMLAIGSYSQ-TSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 229 ~~~p~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
+|+| ++.++++++.++ .+.+||.++++.+..+.. ......++|+|+|++|++++..++.|++||+++++.
T Consensus 121 ~~~~-dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~ 191 (300)
T TIGR03866 121 AVSP-DGKIVVNTSETTNMAHFIDTKTYEIVDNVLV-DQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKV 191 (300)
T ss_pred EECC-CCCEEEEEecCCCeEEEEeCCCCeEEEEEEc-CCCccEEEECCCCCEEEEEcCCCCEEEEEEcCccee
Confidence 9999 677788777765 577889988877665542 334578999999998866553699999999998764
No 166
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.83 E-value=1.4e-18 Score=145.90 Aligned_cols=199 Identities=16% Similarity=0.253 Sum_probs=149.1
Q ss_pred CCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (304)
.-.-++++++|+.+|+++|.||.|-.|++-++.+... .....+|..+|.++.| +|+
T Consensus 94 Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~-----------------~~~lrgh~apVl~l~~-------~p~ 149 (933)
T KOG1274|consen 94 RFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQ-----------------EKVLRGHDAPVLQLSY-------DPK 149 (933)
T ss_pred eeeccceEEEEecCCcEEEeecCceeEEEEeccccch-----------------heeecccCCceeeeeE-------cCC
Confidence 3456799999999999999999999999999875432 2255567789999988 779
Q ss_pred ccEEEEEeCCCCEEEEEcCCCeeeEEeeccccc---ccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCCccceeeee
Q 022019 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAV---DEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
+++||+.+-||.|++||+.++....++...... .....+..++|+|++..++ .+.|+.|++|+.......+ .
T Consensus 150 ~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f----~ 225 (933)
T KOG1274|consen 150 GNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQF----K 225 (933)
T ss_pred CCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceehe----e
Confidence 999999999999999999998877666543221 1123677899999965555 6799999999987643222 2
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
+.. ..+...+..+.|+| .|.+||+++.||.|.|||.++... ......|++++|.|+..-|-... ..|...+
T Consensus 226 Lr~--~~~ss~~~~~~wsP-nG~YiAAs~~~g~I~vWnv~t~~~----~~~~~~Vc~~aw~p~~n~it~~~-~~g~~~~ 296 (933)
T KOG1274|consen 226 LRD--KLSSSKFSDLQWSP-NGKYIAASTLDGQILVWNVDTHER----HEFKRAVCCEAWKPNANAITLIT-ALGTLGV 296 (933)
T ss_pred ecc--cccccceEEEEEcC-CCcEEeeeccCCcEEEEecccchh----ccccceeEEEecCCCCCeeEEEe-ecccccc
Confidence 221 23344489999999 799999999999999999987222 22345799999999987654443 3444333
No 167
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.83 E-value=1.4e-18 Score=128.02 Aligned_cols=205 Identities=16% Similarity=0.224 Sum_probs=155.0
Q ss_pred cCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeC
Q 022019 57 SIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135 (304)
Q Consensus 57 ~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 135 (304)
..+..++++..|+. +.+++.+++-|-+..|||+.++. ...+...++.|...|++++|...
T Consensus 147 s~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~--------------~~~vkTQLIAHDKEV~DIaf~~~----- 207 (364)
T KOG0290|consen 147 SEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGV--------------SGTVKTQLIAHDKEVYDIAFLKG----- 207 (364)
T ss_pred cccCCcccccccccCCcceeEeecccCeEEEEEEeecc--------------ccceeeEEEecCcceeEEEeccC-----
Confidence 45678999999998 88899999999999999998651 22334467789999999999532
Q ss_pred CCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCC-cEEE-EE-cCCeEEEEEcCCCCccceeee
Q 022019 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG-TKIF-AG-YNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 136 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~-~~-~d~~i~v~d~~~~~~~~~~~~ 212 (304)
..+.||+++.||++++||++..+....+-... ....+...++|++.. +++| .+ ....|.|.|+|.+...
T Consensus 208 -s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p--~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tp----- 279 (364)
T KOG0290|consen 208 -SRDVFASVGADGSVRMFDLRSLEHSTIIYEDP--SPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTP----- 279 (364)
T ss_pred -ccceEEEecCCCcEEEEEecccccceEEecCC--CCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcc-----
Confidence 33589999999999999999765433222111 112378899999854 6666 34 6788999999987433
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc------eEeEEeccccCCeEEEEECC-CCcEEEEeec
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM------ELLYVLHGQEGGVTHVQFSR-DGNYLYTGGR 285 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 285 (304)
...+.+|.+.|.+++|.|.....|++++.|..+.|||+... .++..+. ..+.|..+.|++ .+.+|+.+.
T Consensus 280 --va~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~- 355 (364)
T KOG0290|consen 280 --VARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYT-AGGEVNQIQWSSSQPDWIAICF- 355 (364)
T ss_pred --eehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhh-ccceeeeeeecccCCCEEEEEe-
Confidence 33448899999999999988899999999999999999753 2444444 467899999996 566787775
Q ss_pred cCCeEEEE
Q 022019 286 KDPYILCW 293 (304)
Q Consensus 286 ~d~~i~vw 293 (304)
++++.+.
T Consensus 356 -~kkleiL 362 (364)
T KOG0290|consen 356 -GKKLEIL 362 (364)
T ss_pred -cCeeeEE
Confidence 5555543
No 168
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.83 E-value=1.8e-19 Score=146.02 Aligned_cols=211 Identities=17% Similarity=0.353 Sum_probs=150.5
Q ss_pred CCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 60 NNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 60 ~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
...|+++.|.| |...||.++.||.|++|.+..+......... ..+...|...|+.+.|+|-..
T Consensus 627 gt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tP----------e~~lt~h~eKI~slRfHPLAa------ 690 (1012)
T KOG1445|consen 627 GTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTP----------EKILTIHGEKITSLRFHPLAA------ 690 (1012)
T ss_pred CceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCc----------ceeeecccceEEEEEecchhh------
Confidence 45699999999 8889999999999999999877654332222 236677889999999998743
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCCccceeeeeeecc
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGN 217 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 217 (304)
..|++++.|.+|++||+.+++....+..|.. .|.+++|+|+|+.++ ++.||+|++|..+........-.....
T Consensus 691 dvLa~asyd~Ti~lWDl~~~~~~~~l~gHtd-----qIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvg- 764 (1012)
T KOG1445|consen 691 DVLAVASYDSTIELWDLANAKLYSRLVGHTD-----QIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVG- 764 (1012)
T ss_pred hHhhhhhccceeeeeehhhhhhhheeccCcC-----ceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccCCCCcc-
Confidence 3799999999999999999988888887765 999999999999999 689999999999876544332222211
Q ss_pred ccccccceeEEEeecCCCcEEEEEecC----CeEEEEecCCc--eEeEEeccc-cCCeEEEEECCCCcEEEEeeccCCeE
Q 022019 218 KEGQAGIMSAIAFSPTHTGMLAIGSYS----QTSAIYREDNM--ELLYVLHGQ-EGGVTHVQFSRDGNYLYTGGRKDPYI 290 (304)
Q Consensus 218 ~~~~~~~v~~~~~~p~~~~~l~~~~~d----g~i~i~d~~~~--~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~d~~i 290 (304)
..-..+.|.= +++++++.+.| ..|.+||..+. .++.+..-. ...+.--.+.+|...|+..|..|..|
T Consensus 765 -----tRgARi~wac-dgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfltGKGD~~v 838 (1012)
T KOG1445|consen 765 -----TRGARILWAC-DGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLTGKGDRFV 838 (1012)
T ss_pred -----CcceeEEEEe-cCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEecCCCceE
Confidence 1123456666 55566665554 45888987653 333333211 11222334566666655444489999
Q ss_pred EEEecccc
Q 022019 291 LCWDLRKA 298 (304)
Q Consensus 291 ~vwd~~~~ 298 (304)
.+|++-..
T Consensus 839 ~~yEv~~e 846 (1012)
T KOG1445|consen 839 NMYEVIYE 846 (1012)
T ss_pred EEEEecCC
Confidence 99987543
No 169
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.82 E-value=2.3e-18 Score=128.42 Aligned_cols=211 Identities=19% Similarity=0.238 Sum_probs=161.8
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
-..+|+|.+|++|+..+|.+.....|-||....... .........|...|+.++| +|..
T Consensus 9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~--------------w~~~htls~Hd~~vtgvdW-------ap~s 67 (361)
T KOG1523|consen 9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADL--------------WEPAHTLSEHDKIVTGVDW-------APKS 67 (361)
T ss_pred ccCceeeeeecCCCceEEeccCCceEEEEEecCCCC--------------ceeceehhhhCcceeEEee-------cCCC
Confidence 356799999999999999999999999998875432 1122244567788999999 6678
Q ss_pred cEEEEEeCCCCEEEEEc-CCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeec
Q 022019 139 CVFASTTRDHPIHLWDA-TTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKG 216 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~-~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~ 216 (304)
+.|++|+.|..-++|.. ..++...++.... ....++++.|+|.++.+++| ....|.||-++... .....+.
T Consensus 68 nrIvtcs~drnayVw~~~~~~~WkptlvLlR---iNrAAt~V~WsP~enkFAVgSgar~isVcy~E~EN----dWWVsKh 140 (361)
T KOG1523|consen 68 NRIVTCSHDRNAYVWTQPSGGTWKPTLVLLR---INRAATCVKWSPKENKFAVGSGARLISVCYYEQEN----DWWVSKH 140 (361)
T ss_pred CceeEccCCCCccccccCCCCeeccceeEEE---eccceeeEeecCcCceEEeccCccEEEEEEEeccc----ceehhhh
Confidence 88999999999999998 5555444333221 11288999999999999977 78889999887532 1222233
Q ss_pred cccccccceeEEEeecCCCcEEEEEecCCeEEEEecC------------------CceEeEEeccccCCeEEEEECCCCc
Q 022019 217 NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED------------------NMELLYVLHGQEGGVTHVQFSRDGN 278 (304)
Q Consensus 217 ~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~ 278 (304)
....+...|++++|+| ++-+|++|+.|+..++|..- -|+++.++....+.+..+.|+|+|.
T Consensus 141 ikkPirStv~sldWhp-nnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~ 219 (361)
T KOG1523|consen 141 IKKPIRSTVTSLDWHP-NNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGN 219 (361)
T ss_pred hCCccccceeeeeccC-CcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCC
Confidence 3355677899999999 88899999999999999641 1234445545567899999999999
Q ss_pred EEEEeeccCCeEEEEecccce
Q 022019 279 YLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 279 ~l~~~~~~d~~i~vwd~~~~~ 299 (304)
.|+-.+ .|+.+.+=|.....
T Consensus 220 ~lawv~-Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 220 RLAWVG-HDSTVSFVDAAGPS 239 (361)
T ss_pred EeeEec-CCCceEEeecCCCc
Confidence 999999 99999999887664
No 170
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.82 E-value=3.6e-19 Score=132.77 Aligned_cols=165 Identities=16% Similarity=0.322 Sum_probs=114.0
Q ss_pred EEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeee--------------------------------
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLR-------------------------------- 161 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-------------------------------- 161 (304)
.+.+|+..|++++| +.||+.|++++.|++|++|+++.-...
T Consensus 81 ~LKgH~~~vt~~~F-------sSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~ 153 (420)
T KOG2096|consen 81 VLKGHKKEVTDVAF-------SSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKR 153 (420)
T ss_pred hhhccCCceeeeEE-------cCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEcc
Confidence 55678899999988 889999999999999999999752110
Q ss_pred ----EEeecccc------------------cccccceEEEEECCCCcEEEE-EcCCeEEEEEcCCCCccceeeeeeeccc
Q 022019 162 ----CTYRAYDA------------------VDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNK 218 (304)
Q Consensus 162 ----~~~~~~~~------------------~~~~~~v~~i~~~~~~~~l~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 218 (304)
..+..... ..+...+..+-....+.+|++ +.|..|.+|+++. +.+. .+
T Consensus 154 g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lkG--q~L~---~i---- 224 (420)
T KOG2096|consen 154 GNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLKG--QLLQ---SI---- 224 (420)
T ss_pred CCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecCC--ceee---ee----
Confidence 00000000 001112223333334455553 3667777777752 1111 11
Q ss_pred cccccceeEEEeecCCCcEEEEEecCCeEEEEecC---C-----ceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeE
Q 022019 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED---N-----MELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYI 290 (304)
Q Consensus 219 ~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~---~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i 290 (304)
......-+..+.+| +|+++++++..-.|++|.+- . -..+..++||...|..++|+|+.+.+++.+ .||++
T Consensus 225 dtnq~~n~~aavSP-~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvS-kDG~w 302 (420)
T KOG2096|consen 225 DTNQSSNYDAAVSP-DGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVS-KDGKW 302 (420)
T ss_pred ccccccccceeeCC-CCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEe-cCCcE
Confidence 22333356778999 88899999999999999863 2 235678899999999999999999999999 99999
Q ss_pred EEEecc
Q 022019 291 LCWDLR 296 (304)
Q Consensus 291 ~vwd~~ 296 (304)
++||++
T Consensus 303 riwdtd 308 (420)
T KOG2096|consen 303 RIWDTD 308 (420)
T ss_pred EEeecc
Confidence 999985
No 171
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.82 E-value=1.6e-18 Score=124.75 Aligned_cols=210 Identities=12% Similarity=0.188 Sum_probs=148.2
Q ss_pred ceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEE
Q 022019 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF 141 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 141 (304)
.|.+-+|+|.+++|+.|..+|.|-++.++....... .............|..+++.++|+ ..+|
T Consensus 12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa-------~~~gk~~iv~eqahdgpiy~~~f~---------d~~L 75 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSA-------EPPGKLKIVPEQAHDGPIYYLAFH---------DDFL 75 (325)
T ss_pred HHHHHhhCCcceEEEEecCCCeEEEEEehhhhcccc-------CCCCCcceeeccccCCCeeeeeee---------hhhe
Confidence 366778999999999999999999999874322111 111122222336788899999984 3367
Q ss_pred EEEeCCCCEEEEEcCCCee----eE----EeecccccccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCCccceeee
Q 022019 142 ASTTRDHPIHLWDATTGLL----RC----TYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 142 ~~~~~dg~i~i~d~~~~~~----~~----~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~ 212 (304)
++|+ ||.|+-|..+.... .. ..+.+........|+++...|..+-++ +|.|+.++-||+++ .
T Consensus 76 ls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~--------G 146 (325)
T KOG0649|consen 76 LSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLED--------G 146 (325)
T ss_pred eecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecC--------C
Confidence 7766 59999998764321 01 111112123344789999998655544 78999999999988 4
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc----------CCeEEEEECCCCcEEEE
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE----------GGVTHVQFSRDGNYLYT 282 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~~ 282 (304)
.+.....+|.+.+.++.--. ....+++|++||++++||.++++.+..+...+ .+|-+++- +..+|++
T Consensus 147 ~i~r~~rGHtDYvH~vv~R~-~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~--~edWlvC 223 (325)
T KOG0649|consen 147 RIQREYRGHTDYVHSVVGRN-ANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAV--NEDWLVC 223 (325)
T ss_pred EEEEEEcCCcceeeeeeecc-cCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEec--cCceEEe
Confidence 44555589999999998755 44478999999999999999999888775322 24555554 5678998
Q ss_pred eeccCCeEEEEecccceee
Q 022019 283 GGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 283 ~~~~d~~i~vwd~~~~~~~ 301 (304)
|+ ...+.+|+++..++.
T Consensus 224 Gg--Gp~lslwhLrsse~t 240 (325)
T KOG0649|consen 224 GG--GPKLSLWHLRSSEST 240 (325)
T ss_pred cC--CCceeEEeccCCCce
Confidence 87 678999999987654
No 172
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.82 E-value=4.1e-18 Score=126.84 Aligned_cols=192 Identities=13% Similarity=0.167 Sum_probs=132.4
Q ss_pred eEEEecCCCeEEEeeCCCCCCccccccccccccCCccc-eEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEE
Q 022019 74 SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYE-ASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHL 152 (304)
Q Consensus 74 ~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 152 (304)
.|+.|++...|.-+++...... ..... ..... .-....|..++++++. ++.++|+|+.|-+|+|
T Consensus 3 ~iIvGtYE~~i~Gf~l~~~~~~-~~~s~-----~~~l~~lF~~~aH~~sitavAV---------s~~~~aSGssDetI~I 67 (362)
T KOG0294|consen 3 EIIVGTYEHVILGFKLDPEPKG-CTDSV-----KPTLKPLFAFSAHAGSITALAV---------SGPYVASGSSDETIHI 67 (362)
T ss_pred eEEEeeeeeEEEEEEeccCccc-ccccc-----ceeeeccccccccccceeEEEe---------cceeEeccCCCCcEEE
Confidence 4677888887777776533200 00000 00000 1123456778888876 7889999999999999
Q ss_pred EEcCCCeeeEEeecccccccccceEEEEECCCCc--EEE-EEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEE
Q 022019 153 WDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT--KIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIA 229 (304)
Q Consensus 153 ~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~--~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 229 (304)
||+++......+-.|.+ .|+++.|.+.-. .|+ ++.||.|.+|+... ........+|.+.|+.++
T Consensus 68 YDm~k~~qlg~ll~Hag-----sitaL~F~~~~S~shLlS~sdDG~i~iw~~~~--------W~~~~slK~H~~~Vt~ls 134 (362)
T KOG0294|consen 68 YDMRKRKQLGILLSHAG-----SITALKFYPPLSKSHLLSGSDDGHIIIWRVGS--------WELLKSLKAHKGQVTDLS 134 (362)
T ss_pred Eeccchhhhcceecccc-----ceEEEEecCCcchhheeeecCCCcEEEEEcCC--------eEEeeeecccccccceeE
Confidence 99998888777776655 999999999763 566 55999999999865 455555688999999999
Q ss_pred eecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 230 FSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 230 ~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
.+| .+++.++.+.|+.++.||+-.++.-..++- ...-+.+.|+|.|.+++.++ -..|-+|.+.+
T Consensus 135 iHP-S~KLALsVg~D~~lr~WNLV~Gr~a~v~~L-~~~at~v~w~~~Gd~F~v~~--~~~i~i~q~d~ 198 (362)
T KOG0294|consen 135 IHP-SGKLALSVGGDQVLRTWNLVRGRVAFVLNL-KNKATLVSWSPQGDHFVVSG--RNKIDIYQLDN 198 (362)
T ss_pred ecC-CCceEEEEcCCceeeeehhhcCccceeecc-CCcceeeEEcCCCCEEEEEe--ccEEEEEeccc
Confidence 999 888999999999999999977765444431 11223366666655555444 22355555443
No 173
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.82 E-value=1.2e-18 Score=133.66 Aligned_cols=222 Identities=11% Similarity=0.120 Sum_probs=163.0
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+.+|.+.|++|.|+.++++|++|+.|..+++|++...-.... .+......-+|...|.+++|
T Consensus 51 D~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~----------~KPI~~~~~~H~SNIF~L~F------- 113 (609)
T KOG4227|consen 51 DVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKT----------PKPIGVMEHPHRSNIFSLEF------- 113 (609)
T ss_pred hhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcC----------CCCceeccCccccceEEEEE-------
Confidence 6779999999999999999999999999999999864321111 11122233345578999987
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcCCeEEEEEcCCCCccceeeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
+..+..+++|..+++|.+.|+++.+.+..+.... ..+.|+.+..+|..+.+++ +.++.|.+||.+........+..
T Consensus 114 ~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~---~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~ 190 (609)
T KOG4227|consen 114 DLENRFLYSGERWGTVIKHDIETKQSIYVANENN---NRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLP 190 (609)
T ss_pred ccCCeeEecCCCcceeEeeecccceeeeeecccC---cccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeee
Confidence 6678899999999999999999887766554332 3348999999998888874 59999999999975444433222
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce-EeEEec------cccCCeEEEEECCCCcEEEEeecc
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME-LLYVLH------GQEGGVTHVQFSRDGNYLYTGGRK 286 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~~ 286 (304)
.........+.|+|-...+|++.+..+-+-+||++... ++.... .....-.++.|+|+|..+++-- .
T Consensus 191 -----AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiR-R 264 (609)
T KOG4227|consen 191 -----ANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIR-R 264 (609)
T ss_pred -----cCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhh-c
Confidence 22334577899999888899999999999999998543 222221 1122346788999999988776 5
Q ss_pred CCeEEEEecccceeee
Q 022019 287 DPYILCWDLRKAVQVV 302 (304)
Q Consensus 287 d~~i~vwd~~~~~~~~ 302 (304)
...-.+||+-+.++.+
T Consensus 265 ~~~P~~~D~~S~R~~V 280 (609)
T KOG4227|consen 265 GKCPLYFDFISQRCFV 280 (609)
T ss_pred cCCCEEeeeeccccee
Confidence 5566777877765554
No 174
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.81 E-value=2.6e-18 Score=128.44 Aligned_cols=193 Identities=15% Similarity=0.215 Sum_probs=141.8
Q ss_pred eeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEE
Q 022019 63 LKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFA 142 (304)
Q Consensus 63 V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~ 142 (304)
-.+++|+|||.+|+.| ....|++||+............... -..+...-+.+++++|. +...++
T Consensus 161 AhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~---------~k~gq~giisc~a~sP~------~~~~~a 224 (406)
T KOG2919|consen 161 AHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTK---------GKFGQKGIISCFAFSPM------DSKTLA 224 (406)
T ss_pred heeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhc---------ccccccceeeeeeccCC------CCccee
Confidence 4589999999999854 5679999999543332222111110 01222356677777665 455899
Q ss_pred EEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE--cCCeEEEEEcCCCCccceeeeeeeccccc
Q 022019 143 STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG--YNKSVRVFDVHRPGRDFEKYSTLKGNKEG 220 (304)
Q Consensus 143 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~ 220 (304)
.|+....+-||.-..+.+...+-.+.. .|+.+.|.++|+.|++| .+..|-.||+|......-.+ ..
T Consensus 225 ~gsY~q~~giy~~~~~~pl~llggh~g-----GvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L-------~r 292 (406)
T KOG2919|consen 225 VGSYGQRVGIYNDDGRRPLQLLGGHGG-----GVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYAL-------ER 292 (406)
T ss_pred eecccceeeeEecCCCCceeeecccCC-----CeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhh-------hh
Confidence 999999999999888888887776655 99999999999999966 89999999998753322211 22
Q ss_pred ccc-cee--EEEeecCCCcEEEEEecCCeEEEEecCC-ceEeEEeccccCCeEEEEECCCCcEEEEee
Q 022019 221 QAG-IMS--AIAFSPTHTGMLAIGSYSQTSAIYREDN-MELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 221 ~~~-~v~--~~~~~p~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
|.. .-. -+...| .+.+|++|+.||.|++||++. +..+..+..+...++.++++|--.++++++
T Consensus 293 hv~~TNQRI~FDld~-~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatss 359 (406)
T KOG2919|consen 293 HVGDTNQRILFDLDP-KGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSS 359 (406)
T ss_pred hccCccceEEEecCC-CCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeecc
Confidence 222 111 245567 788999999999999999988 677778888899999999999988888776
No 175
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.80 E-value=5.5e-17 Score=128.17 Aligned_cols=199 Identities=19% Similarity=0.280 Sum_probs=152.6
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
...+|.+..+.++..|+...|+|++.|+.+++|+ +.+.. ....-..++.+..|
T Consensus 363 ~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~------------------wt~~~~d~~~~~~f------- 415 (626)
T KOG2106|consen 363 TVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLE------------------WTKIIEDPAECADF------- 415 (626)
T ss_pred EEEecccceeeEEcCCChhheeeccCcceEEEcc--CCcee------------------EEEEecCceeEeec-------
Confidence 4568999999999999999999999999999998 22211 11222356666665
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
+|.| .++.|...|...+.|.++...+..... .. ++.+++|+|+|.+||+| .|+.|+||-+...+........
T Consensus 416 hpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~-----~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k 488 (626)
T KOG2106|consen 416 HPSG-VVAVGTATGRWFVLDTETQDLVTIHTD-NE-----QLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGK 488 (626)
T ss_pred cCcc-eEEEeeccceEEEEecccceeEEEEec-CC-----ceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeee
Confidence 6677 899999999999999998665544443 32 89999999999999976 9999999999887766655544
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc--------------------------------------
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM-------------------------------------- 255 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~-------------------------------------- 255 (304)
. +..+|+.+.|++ +++++.+-+-|-.|..|.....
T Consensus 489 ~------~gs~ithLDwS~-Ds~~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~ 561 (626)
T KOG2106|consen 489 C------SGSPITHLDWSS-DSQFLVSNSGDYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSH 561 (626)
T ss_pred e------cCceeEEeeecC-CCceEEeccCceEEEEEccccCcccceecceeeeeeEEEEEEEEecccCCchHHHhhhhh
Confidence 3 227799999999 6778888887777877742111
Q ss_pred -------------------------eEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEec
Q 022019 256 -------------------------ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 256 -------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
.+...+.+|.+-|++++|..+...+++.+ .|..|..|++
T Consensus 562 ~~~~lA~gdd~g~v~lf~yPc~s~rA~~he~~ghs~~vt~V~Fl~~d~~li~tg-~D~Si~qW~l 625 (626)
T KOG2106|consen 562 CEKLLASGDDFGKVHLFSYPCSSPRAPSHEYGGHSSHVTNVAFLCKDSHLISTG-KDTSIMQWRL 625 (626)
T ss_pred hhhhhhccccCceEEEEccccCCCcccceeeccccceeEEEEEeeCCceEEecC-CCceEEEEEe
Confidence 11223446778899999998888888888 9999999986
No 176
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.80 E-value=3.9e-19 Score=144.06 Aligned_cols=154 Identities=18% Similarity=0.229 Sum_probs=123.6
Q ss_pred eCCCCEEEEEcCCC-eeeE-EeecccccccccceEEEEECC-CCcEEEE-EcCCeEEEEEcCCCCccceeeeeeeccccc
Q 022019 145 TRDHPIHLWDATTG-LLRC-TYRAYDAVDEITAAFSVAFNP-TGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEG 220 (304)
Q Consensus 145 ~~dg~i~i~d~~~~-~~~~-~~~~~~~~~~~~~v~~i~~~~-~~~~l~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~ 220 (304)
+..|.|-||+++.. +... .+.. ......|+.+.|+| |...|++ +.||.|++|.+..++-.. ...+.......
T Consensus 600 g~gG~iai~el~~PGrLPDgv~p~---l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e-~~~tPe~~lt~ 675 (1012)
T KOG1445|consen 600 GSGGVIAIYELNEPGRLPDGVMPG---LFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPE-NEMTPEKILTI 675 (1012)
T ss_pred CCCceEEEEEcCCCCCCCcccccc---cccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCc-ccCCcceeeec
Confidence 55789999999752 2211 1111 12233899999999 6677775 599999999998754322 22333444577
Q ss_pred cccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 221 QAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 221 ~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
|...|+++.|+|-...+|+++++|-+|++||+++++....+.+|.+.|.+++|||||+.+++.+ .||+|++|+.++++.
T Consensus 676 h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVc-KDg~~rVy~Prs~e~ 754 (1012)
T KOG1445|consen 676 HGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVC-KDGTLRVYEPRSREQ 754 (1012)
T ss_pred ccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeee-cCceEEEeCCCCCCC
Confidence 8899999999998888999999999999999999999999999999999999999999999999 999999999998877
Q ss_pred eee
Q 022019 301 VVY 303 (304)
Q Consensus 301 ~~~ 303 (304)
.+|
T Consensus 755 pv~ 757 (1012)
T KOG1445|consen 755 PVY 757 (1012)
T ss_pred ccc
Confidence 654
No 177
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.79 E-value=7.6e-18 Score=126.16 Aligned_cols=173 Identities=18% Similarity=0.315 Sum_probs=132.2
Q ss_pred EEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCC----CcEEE
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT----GTKIF 189 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~----~~~l~ 189 (304)
+...++.+++.++|++.... .+-..+++++ ...+.+|.....-..+.++......+....+.++|+-+ +.+++
T Consensus 33 l~ed~~~~I~gv~fN~~~~~--~e~~vfatvG-~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la 109 (385)
T KOG1034|consen 33 LKEDHNKPIFGVAFNSFLGC--DEPQVFATVG-GNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLA 109 (385)
T ss_pred hhccCCCccceeeeehhcCC--CCCceEEEeC-CcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEE
Confidence 55567788999988654322 1223455555 44688888765433344443333344456777888653 34666
Q ss_pred -EEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec---ccc
Q 022019 190 -AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH---GQE 265 (304)
Q Consensus 190 -~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~ 265 (304)
+|.-|.|+|.|+.+ .++.....+|...|..+.|+|+..++++++|.|..|++|++++..++..|- +|.
T Consensus 110 ~~G~~GvIrVid~~~--------~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHr 181 (385)
T KOG1034|consen 110 AGGYLGVIRVIDVVS--------GQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHR 181 (385)
T ss_pred eecceeEEEEEecch--------hhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEeccccccc
Confidence 45899999999986 444555588999999999999888999999999999999999999988874 799
Q ss_pred CCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 266 GGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 266 ~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
..|.++.|+++|.+|+++| .|.+|++|++...
T Consensus 182 deVLSvD~~~~gd~i~ScG-mDhslk~W~l~~~ 213 (385)
T KOG1034|consen 182 DEVLSVDFSLDGDRIASCG-MDHSLKLWRLNVK 213 (385)
T ss_pred CcEEEEEEcCCCCeeeccC-CcceEEEEecChh
Confidence 9999999999999999999 9999999999843
No 178
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.78 E-value=4.4e-17 Score=135.53 Aligned_cols=249 Identities=13% Similarity=0.116 Sum_probs=168.6
Q ss_pred cccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCC--eEEEecCCCeEEEeeCCCCCCccccccccccccC
Q 022019 30 QEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGS--SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQ 107 (304)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~--~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~ 107 (304)
+.+...+..||............-.....|..+|+.+.|..+-. -|++++.||.|..|+++.-.............
T Consensus 261 G~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~-- 338 (555)
T KOG1587|consen 261 GCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKK-- 338 (555)
T ss_pred eccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhccccccc--
Confidence 33444677788776655322233335678999999999987444 49999999999999876443322211111000
Q ss_pred CccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeee--EEeecc-cccccccceEEEEECCC
Q 022019 108 DSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLR--CTYRAY-DAVDEITAAFSVAFNPT 184 (304)
Q Consensus 108 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~-~~~~~~~~v~~i~~~~~ 184 (304)
...........++.+.|.+. +-..|++|+++|.|+--+....+.. ..++.+ ....|.++|+++.++|-
T Consensus 339 ---~~~~~~~~~~~~t~~~F~~~------~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF 409 (555)
T KOG1587|consen 339 ---HKGQQSSKAVGATSLKFEPT------DPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPF 409 (555)
T ss_pred ---ccccccccccceeeEeeccC------CCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCC
Confidence 00111222356777888665 4457999999998877443322211 122222 12235559999999997
Q ss_pred CcEEE-EEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc--eEeEEe
Q 022019 185 GTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM--ELLYVL 261 (304)
Q Consensus 185 ~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~ 261 (304)
+..++ ++.|.+++||.......+ ......+...+++++|||.....++++..||.|.|||+... .++.+.
T Consensus 410 ~~k~fls~gDW~vriWs~~~~~~P-------l~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~ 482 (555)
T KOG1587|consen 410 YPKNFLSVGDWTVRIWSEDVIASP-------LLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQ 482 (555)
T ss_pred ccceeeeeccceeEeccccCCCCc-------chhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcccc
Confidence 76555 557999999998632211 11224455569999999977789999999999999999654 567777
Q ss_pred ccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 262 HGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 262 ~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
..+....+.+.|++.|+.|++|. ..|.+.+|++..
T Consensus 483 ~~~~~~l~~~~~s~~g~~lavGd-~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 483 KVCSPALTRVRWSPNGKLLAVGD-ANGTTHILKLSE 517 (555)
T ss_pred cccccccceeecCCCCcEEEEec-CCCcEEEEEcCc
Confidence 66667788899999999999999 999999999964
No 179
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.78 E-value=4.6e-19 Score=138.31 Aligned_cols=230 Identities=19% Similarity=0.269 Sum_probs=171.6
Q ss_pred cccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCc
Q 022019 30 QEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDS 109 (304)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 109 (304)
....|.+..-++...-..........+.-..-.-..+.++.+|++|+.|+.-|.|-.+|+.+..+..++..
T Consensus 99 ~EkT~~v~Q~~Ia~~Vdi~sa~k~f~L~l~eFGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v--------- 169 (545)
T KOG1272|consen 99 LEKTYKVRQDDIAENVDIASATKHFDLSLPEFGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINV--------- 169 (545)
T ss_pred CcceeeeEHhhhhhhccHHhHHhhccccccccCCeeeeecCCccEEEecCCccceeeeecccceeeeeeeh---------
Confidence 34444444444433333322222223333344567899999999999999999999999998766544332
Q ss_pred cceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE
Q 022019 110 YEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF 189 (304)
Q Consensus 110 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 189 (304)
...|.++.|.. +.++||+ .....++|||- .|..+..+..+. .|..+.|-|..-+|+
T Consensus 170 ---------~Etv~Dv~~LH-------neq~~AV-AQK~y~yvYD~-~GtElHClk~~~------~v~rLeFLPyHfLL~ 225 (545)
T KOG1272|consen 170 ---------METVRDVTFLH-------NEQFFAV-AQKKYVYVYDN-NGTELHCLKRHI------RVARLEFLPYHFLLV 225 (545)
T ss_pred ---------hhhhhhhhhhc-------chHHHHh-hhhceEEEecC-CCcEEeehhhcC------chhhhcccchhheee
Confidence 35677777732 3344544 46778999994 566666666555 788999999988888
Q ss_pred EE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCe
Q 022019 190 AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGV 268 (304)
Q Consensus 190 ~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v 268 (304)
++ ..|.++.-|+..+ .+...+....+.+..++-+| ..-++-+|..+|+|.+|.....+++..+-.|.++|
T Consensus 226 ~~~~~G~L~Y~DVS~G--------klVa~~~t~~G~~~vm~qNP-~NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V 296 (545)
T KOG1272|consen 226 AASEAGFLKYQDVSTG--------KLVASIRTGAGRTDVMKQNP-YNAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPV 296 (545)
T ss_pred ecccCCceEEEeechh--------hhhHHHHccCCccchhhcCC-ccceEEEcCCCceEEecCCCCcchHHHHHhcCCCc
Confidence 54 8899999999874 22223344556688899999 67799999999999999999999999998999999
Q ss_pred EEEEECCCCcEEEEeeccCCeEEEEecccceeee
Q 022019 269 THVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 269 ~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
.++++.++|+|++|+| .|..++|||+++..++.
T Consensus 297 ~siAv~~~G~YMaTtG-~Dr~~kIWDlR~~~ql~ 329 (545)
T KOG1272|consen 297 SSIAVDRGGRYMATTG-LDRKVKIWDLRNFYQLH 329 (545)
T ss_pred ceEEECCCCcEEeecc-cccceeEeeeccccccc
Confidence 9999999999999999 99999999999876553
No 180
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.78 E-value=1.1e-17 Score=125.89 Aligned_cols=213 Identities=17% Similarity=0.295 Sum_probs=139.9
Q ss_pred eeeecCCCCceeEEEEcC--CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 53 FRTSSIPNNFLKGIKWSP--DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~--~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
+..+++|...++.++|.. .+..+.+|+.||+|++||++.......+.- ....+.+..++.-
T Consensus 63 l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~--------------~~~~~~~f~~ld~--- 125 (376)
T KOG1188|consen 63 LEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISW--------------TQQSGTPFICLDL--- 125 (376)
T ss_pred hheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheec--------------cCCCCCcceEeec---
Confidence 347889999999999987 456899999999999999986533211110 0011123333322
Q ss_pred cceeCCCccEEEEEeC----CCCEEEEEcCCCee-eEEeecccccccccceEEEEECCCC-cEEEEE-cCCeEEEEEcCC
Q 022019 131 MSASDPTSCVFASTTR----DHPIHLWDATTGLL-RCTYRAYDAVDEITAAFSVAFNPTG-TKIFAG-YNKSVRVFDVHR 203 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~-~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~-~d~~i~v~d~~~ 203 (304)
+..++.+++|.. +-.|.+||++..+. +..+.. .|...|+++.|+|.. +.|++| .||.|.+||+..
T Consensus 126 ----nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~e----SH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~ 197 (376)
T KOG1188|consen 126 ----NCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNE----SHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKK 197 (376)
T ss_pred ----cCcCCeEEeccccccCceEEEEEEeccccchhhhhhh----hccCcceeEEecCCCCCeEEeecccceEEeeecCC
Confidence 445667777743 56799999997665 333322 233489999999965 555566 999999999986
Q ss_pred CCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceE--------------------------
Q 022019 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL-------------------------- 257 (304)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~-------------------------- 257 (304)
....-..... -.+...|..+.|....=..|.+-+..+...+|+++.+.+
T Consensus 198 d~EeDaL~~v-----iN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~ 272 (376)
T KOG1188|consen 198 DNEEDALLHV-----INHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINE 272 (376)
T ss_pred CcchhhHHHh-----hcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeec
Confidence 5322111111 234555778888763334577777777788887653311
Q ss_pred -----------------------------------eEEecc-ccCCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 258 -----------------------------------LYVLHG-QEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 258 -----------------------------------~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
+..+.+ |..-|+++.|...+.+++||| .||.+.+|...
T Consensus 273 ~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGG-EDG~l~~Wk~~ 346 (376)
T KOG1188|consen 273 HSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGG-EDGLLQAWKVE 346 (376)
T ss_pred ccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccC-CCceEEEEecC
Confidence 111222 344567777777788999999 99999999853
No 181
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.78 E-value=4.9e-18 Score=130.09 Aligned_cols=176 Identities=20% Similarity=0.275 Sum_probs=131.6
Q ss_pred CeEEEEeecCccceeCCCccEEEEE---eCCCCEEEEEcC-CCeeeEEeecccccccccceEEEEECCCC-cEEEEE-cC
Q 022019 120 ESVYDFCWFPHMSASDPTSCVFAST---TRDHPIHLWDAT-TGLLRCTYRAYDAVDEITAAFSVAFNPTG-TKIFAG-YN 193 (304)
Q Consensus 120 ~~v~~~~~~~~~~~~~~~~~~l~~~---~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~-~d 193 (304)
-.|....|...+.+++|. +++.. +..|...+.-+. .|+....++.. .+|..+|..++|+|-+ ..||+| .|
T Consensus 28 IrVs~~tWDS~fcavNPk--fiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v--~GHt~~vLDi~w~PfnD~vIASgSeD 103 (472)
T KOG0303|consen 28 IRVSRVTWDSSFCAVNPK--FVAVIIEASGGGAFLVIPLVKTGRMDASYPLV--CGHTAPVLDIDWCPFNDCVIASGSED 103 (472)
T ss_pred eeeeeeeccccccccCCc--eEEEEEecCCCcceeecccccccccCCCCCCc--cCccccccccccCccCCceeecCCCC
Confidence 356677777666666553 44433 334455555443 34333333222 2456699999999954 556655 99
Q ss_pred CeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEE
Q 022019 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQF 273 (304)
Q Consensus 194 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 273 (304)
.+|.||++-..+.... .......+.+|...|.-++|+|...+.|++++.|..|.+|+..+++.+.++. |..-|++++|
T Consensus 104 ~~v~vW~IPe~~l~~~-ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sf 181 (472)
T KOG0303|consen 104 TKVMVWQIPENGLTRD-LTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSF 181 (472)
T ss_pred ceEEEEECCCcccccC-cccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEe
Confidence 9999999976432221 2233334578999999999999888999999999999999999999988888 9999999999
Q ss_pred CCCCcEEEEeeccCCeEEEEecccceeee
Q 022019 274 SRDGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 274 ~~~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
+-||.+|++++ .|..|+|||.++++.+.
T Consensus 182 n~dGs~l~Ttc-kDKkvRv~dpr~~~~v~ 209 (472)
T KOG0303|consen 182 NRDGSLLCTTC-KDKKVRVIDPRRGTVVS 209 (472)
T ss_pred ccCCceeeeec-ccceeEEEcCCCCcEee
Confidence 99999999999 99999999999997653
No 182
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.78 E-value=1.9e-17 Score=131.71 Aligned_cols=177 Identities=17% Similarity=0.240 Sum_probs=125.9
Q ss_pred CCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCC
Q 022019 70 PDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHP 149 (304)
Q Consensus 70 ~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~ 149 (304)
|.+--|+.|-.-|.|.+.|....+....++. -.......|+++.|.|. +...++++-.+|.
T Consensus 183 ~~g~dllIGf~tGqvq~idp~~~~~sklfne-------------~r~i~ktsvT~ikWvpg------~~~~Fl~a~~sGn 243 (636)
T KOG2394|consen 183 PKGLDLLIGFTTGQVQLIDPINFEVSKLFNE-------------ERLINKSSVTCIKWVPG------SDSLFLVAHASGN 243 (636)
T ss_pred CCCcceEEeeccCceEEecchhhHHHHhhhh-------------cccccccceEEEEEEeC------CCceEEEEEecCc
Confidence 3455566777778888888764222111111 11112278999999775 4457778888999
Q ss_pred EEEEEcCC--------------CeeeEEee--cccc-------cccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCC
Q 022019 150 IHLWDATT--------------GLLRCTYR--AYDA-------VDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPG 205 (304)
Q Consensus 150 i~i~d~~~--------------~~~~~~~~--~~~~-------~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~ 205 (304)
+++||..- +....... .... .-....|..++|+|||++|| ++.||.++|||..+
T Consensus 244 lyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt-- 321 (636)
T KOG2394|consen 244 LYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDT-- 321 (636)
T ss_pred eEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccH--
Confidence 99997631 11111110 0000 00123688999999999999 68999999999976
Q ss_pred ccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEEC
Q 022019 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFS 274 (304)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 274 (304)
..+.......-+...|++|+| ++++|++|++|.-|.||.+...+.+..-.+|+++|..++|.
T Consensus 322 ------~eLlg~mkSYFGGLLCvcWSP-DGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 322 ------QELLGVMKSYFGGLLCVCWSP-DGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFD 383 (636)
T ss_pred ------HHHHHHHHhhccceEEEEEcC-CccEEEecCCcceEEEEEeccceEEEeccccccceeeEeec
Confidence 334343455566799999999 88899999999999999999999999999999999999998
No 183
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.77 E-value=3.1e-19 Score=148.54 Aligned_cols=223 Identities=14% Similarity=0.247 Sum_probs=159.2
Q ss_pred ccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEE
Q 022019 45 RTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYD 124 (304)
Q Consensus 45 ~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 124 (304)
..++..+..+.+.+|.++|.|+.|...|.++++|+.|..++||..++..+..... +|...+++
T Consensus 175 tmvqkmk~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~r-----------------Ghs~ditd 237 (1113)
T KOG0644|consen 175 TMVQKMKNIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCR-----------------GHSGDITD 237 (1113)
T ss_pred HHHHHHHHHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCC-----------------CCccccch
Confidence 3444445666788999999999999999999999999999999988765544333 33356666
Q ss_pred EeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCC
Q 022019 125 FCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRP 204 (304)
Q Consensus 125 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~ 204 (304)
++. +.++..+++++.|..|++|.+..+.++..+..|.+ .|++++|+|-. .++.||++++||.+-.
T Consensus 238 lav-------s~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtg-----avtaiafsP~~---sss~dgt~~~wd~r~~ 302 (1113)
T KOG0644|consen 238 LAV-------SSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTG-----AVTAIAFSPRA---SSSDDGTCRIWDARLE 302 (1113)
T ss_pred hcc-------chhhhhhhhcccCceEEEEecCCCchHHHHhcccc-----ceeeeccCccc---cCCCCCceEecccccc
Confidence 654 66777899999999999999999999988887765 99999999965 5569999999999821
Q ss_pred Cccce----------eeeee------------eccccccccceeEEEeecCCCcEEE-----------EEecCCeEEEEe
Q 022019 205 GRDFE----------KYSTL------------KGNKEGQAGIMSAIAFSPTHTGMLA-----------IGSYSQTSAIYR 251 (304)
Q Consensus 205 ~~~~~----------~~~~~------------~~~~~~~~~~v~~~~~~p~~~~~l~-----------~~~~dg~i~i~d 251 (304)
..... ....+ .....+....+..++|.. ....++ ++-.+-.+.+|+
T Consensus 303 ~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~-~~lif~t~ssd~~~~~~~ar~~~~~~vwn 381 (1113)
T KOG0644|consen 303 PRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAWRS-NLLIFVTRSSDLSSIVVTARNDHRLCVWN 381 (1113)
T ss_pred ccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhHhhhhc-cceEEEeccccccccceeeeeeeEeeeee
Confidence 11000 00000 000000011122233332 222233 333445678899
Q ss_pred cCCceEeEEeccccCCeEEEEECCCCcEE-EEeeccCCeEEEEecccceee
Q 022019 252 EDNMELLYVLHGQEGGVTHVQFSRDGNYL-YTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 252 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+.++...+.+.+|...+..+.++|-...+ .+++ .||...|||+-.|..+
T Consensus 382 l~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag-~dgst~iwdi~eg~pi 431 (1113)
T KOG0644|consen 382 LYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAG-YDGSTIIWDIWEGIPI 431 (1113)
T ss_pred cccchhhhhhcccccceeeeeecCCCcHhhhhcc-CCCceEeeecccCCcc
Confidence 98998888899999999999999977655 4666 9999999999887655
No 184
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.77 E-value=1.7e-17 Score=132.13 Aligned_cols=183 Identities=21% Similarity=0.309 Sum_probs=139.5
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
....|.+.|.+-.|+|||.-|+|++.||.|++|.-... ..........+|++++|.|
T Consensus 99 sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGM------------------LRStl~Q~~~~v~c~~W~p----- 155 (737)
T KOG1524|consen 99 SISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGM------------------LRSTVVQNEESIRCARWAP----- 155 (737)
T ss_pred hhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccch------------------HHHHHhhcCceeEEEEECC-----
Confidence 56789999999999999999999999999999975422 1223344557999999955
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
+.+.++.+. .+.+.|=.+.....+..++.|++ -|.++.|++....+++| .|-..++||-.. .
T Consensus 156 --~S~~vl~c~-g~h~~IKpL~~n~k~i~WkAHDG-----iiL~~~W~~~s~lI~sgGED~kfKvWD~~G---------~ 218 (737)
T KOG1524|consen 156 --NSNSIVFCQ-GGHISIKPLAANSKIIRWRAHDG-----LVLSLSWSTQSNIIASGGEDFRFKIWDAQG---------A 218 (737)
T ss_pred --CCCceEEec-CCeEEEeecccccceeEEeccCc-----EEEEeecCccccceeecCCceeEEeecccC---------c
Confidence 554555543 45688888877777777887776 89999999999999965 999999999753 1
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
.......|..+|++++|+| + ..++.++.+ +.+ --+...+.|..++||+||..++.|. ..|.+.+
T Consensus 219 ~Lf~S~~~ey~ITSva~np-d-~~~~v~S~n-t~R-----------~~~p~~GSifnlsWS~DGTQ~a~gt-~~G~v~~ 282 (737)
T KOG1524|consen 219 NLFTSAAEEYAITSVAFNP-E-KDYLLWSYN-TAR-----------FSSPRVGSIFNLSWSADGTQATCGT-STGQLIV 282 (737)
T ss_pred ccccCChhccceeeeeecc-c-cceeeeeee-eee-----------ecCCCccceEEEEEcCCCceeeccc-cCceEEE
Confidence 1122266888999999999 5 567777753 333 1123457899999999999999998 7887654
No 185
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.77 E-value=1e-16 Score=133.51 Aligned_cols=196 Identities=14% Similarity=0.124 Sum_probs=128.2
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCC---CeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSED---KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~d---g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
.+..|...+...+|+|||+.|+.++.+ ..|.+||+.++.... + ..........+
T Consensus 198 ~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~-----------------l-~~~~g~~~~~~----- 254 (429)
T PRK01742 198 IVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKV-----------------V-ASFRGHNGAPA----- 254 (429)
T ss_pred EeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEE-----------------E-ecCCCccCcee-----
Confidence 456788889999999999999987653 469999987543210 0 00011112334
Q ss_pred ceeCCCccEEEEEe-CCCCEEEE--EcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCc
Q 022019 132 SASDPTSCVFASTT-RDHPIHLW--DATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGR 206 (304)
Q Consensus 132 ~~~~~~~~~l~~~~-~dg~i~i~--d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~ 206 (304)
|+|||+.|+.++ .+|.+.|| |+.++... .+..+.. .+....|+|||+.|+ ++ .++...||++...+.
T Consensus 255 --wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~-----~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~ 326 (429)
T PRK01742 255 --FSPDGSRLAFASSKDGVLNIYVMGANGGTPS-QLTSGAG-----NNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGG 326 (429)
T ss_pred --ECCCCCEEEEEEecCCcEEEEEEECCCCCeE-eeccCCC-----CcCCEEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 488999888764 67765554 66665543 3332221 567899999999877 55 678888888765332
Q ss_pred cceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeecc
Q 022019 207 DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRK 286 (304)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 286 (304)
.... + .+.. ....|+| ++..|+.++.++ +.+||+.+++.......+ ...++.|+|||++|+.++ .
T Consensus 327 ~~~~---l-----~~~~--~~~~~Sp-DG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~--~~~~~~~sPdG~~i~~~s-~ 391 (429)
T PRK01742 327 GASL---V-----GGRG--YSAQISA-DGKTLVMINGDN-VVKQDLTSGSTEVLSSTF--LDESPSISPNGIMIIYSS-T 391 (429)
T ss_pred CeEE---e-----cCCC--CCccCCC-CCCEEEEEcCCC-EEEEECCCCCeEEecCCC--CCCCceECCCCCEEEEEE-c
Confidence 2211 1 1122 3578999 566676666654 566999887654322222 235688999999999999 8
Q ss_pred CCeEEEEecc
Q 022019 287 DPYILCWDLR 296 (304)
Q Consensus 287 d~~i~vwd~~ 296 (304)
++.+.+|++.
T Consensus 392 ~g~~~~l~~~ 401 (429)
T PRK01742 392 QGLGKVLQLV 401 (429)
T ss_pred CCCceEEEEE
Confidence 8888888763
No 186
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.77 E-value=5.3e-16 Score=125.45 Aligned_cols=209 Identities=15% Similarity=0.170 Sum_probs=132.8
Q ss_pred CceeEEEEcCCCCeEEEecC-CCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 61 NFLKGIKWSPDGSSFLTSSE-DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~~-dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
+....++|+|++++|++++. ++.|.+|++++........ ...... ..|+.++++|+++
T Consensus 80 ~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~--------------~~~~~~-------~~~~~~~~~p~g~ 138 (330)
T PRK11028 80 GSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPI--------------QIIEGL-------EGCHSANIDPDNR 138 (330)
T ss_pred CCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCce--------------eeccCC-------CcccEeEeCCCCC
Confidence 35678999999998888764 8899999986432111000 000011 1244455688998
Q ss_pred EEEEEe-CCCCEEEEEcCCCeeeE-----EeecccccccccceEEEEECCCCcEEEEE--cCCeEEEEEcCCCCccceee
Q 022019 140 VFASTT-RDHPIHLWDATTGLLRC-----TYRAYDAVDEITAAFSVAFNPTGTKIFAG--YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 140 ~l~~~~-~dg~i~i~d~~~~~~~~-----~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~v~d~~~~~~~~~~~ 211 (304)
++++++ .++.|.+||+.+..... ...... ......+.|+|+++++++. .++.|.+||+..........
T Consensus 139 ~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~----g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~ 214 (330)
T PRK11028 139 TLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVE----GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECV 214 (330)
T ss_pred EEEEeeCCCCEEEEEEECCCCcccccCCCceecCC----CCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEE
Confidence 876554 56899999997632211 111111 1245689999999999854 58999999997432233333
Q ss_pred eeeecccc--ccccceeEEEeecCCCcEEEEEe-cCCeEEEEecCCce----EeEEeccccCCeEEEEECCCCcEEEEee
Q 022019 212 STLKGNKE--GQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIYREDNME----LLYVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 212 ~~~~~~~~--~~~~~v~~~~~~p~~~~~l~~~~-~dg~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
..+..... ........+.++| ++++++++. .++.|.+|++.... .+..... ......+.|+|+|++|++++
T Consensus 215 ~~~~~~p~~~~~~~~~~~i~~~p-dg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~-~~~p~~~~~~~dg~~l~va~ 292 (330)
T PRK11028 215 QTLDMMPADFSDTRWAADIHITP-DGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPT-ETQPRGFNIDHSGKYLIAAG 292 (330)
T ss_pred EEEecCCCcCCCCccceeEEECC-CCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEec-cccCCceEECCCCCEEEEEE
Confidence 33221111 1122334688999 566666664 47899999986433 2333322 12456789999999999988
Q ss_pred ccCCeEEEEecc
Q 022019 285 RKDPYILCWDLR 296 (304)
Q Consensus 285 ~~d~~i~vwd~~ 296 (304)
..+++|.+|+++
T Consensus 293 ~~~~~v~v~~~~ 304 (330)
T PRK11028 293 QKSHHISVYEID 304 (330)
T ss_pred ccCCcEEEEEEc
Confidence 569999999875
No 187
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.77 E-value=1.9e-16 Score=121.28 Aligned_cols=213 Identities=16% Similarity=0.258 Sum_probs=155.4
Q ss_pred ecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeC
Q 022019 56 SSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135 (304)
Q Consensus 56 ~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 135 (304)
.....++|.+++.. || .|++|-.+|.+.+|..+.+... .........+..+..+.-.+.
T Consensus 101 ~~l~~~~I~gl~~~-dg-~Litc~~sG~l~~~~~k~~d~h--------------ss~l~~la~g~g~~~~r~~~~----- 159 (412)
T KOG3881|consen 101 VSLGTKSIKGLKLA-DG-TLITCVSSGNLQVRHDKSGDLH--------------SSKLIKLATGPGLYDVRQTDT----- 159 (412)
T ss_pred cccccccccchhhc-CC-EEEEEecCCcEEEEeccCCccc--------------cccceeeecCCceeeeccCCC-----
Confidence 34445566666654 33 7888889999999998854321 011123333355555554332
Q ss_pred CCccEEEEEeCC--CCEEEEEcCCCeeeEEeeccc----ccccccceEEEEECCC--CcEEEEE-cCCeEEEEEcCCCCc
Q 022019 136 PTSCVFASTTRD--HPIHLWDATTGLLRCTYRAYD----AVDEITAAFSVAFNPT--GTKIFAG-YNKSVRVFDVHRPGR 206 (304)
Q Consensus 136 ~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~----~~~~~~~v~~i~~~~~--~~~l~~~-~d~~i~v~d~~~~~~ 206 (304)
....+++|+.. ..+.+||+...+.+..-.... ...-+-.++++.|-+. ...|+++ .-+.+++||.+...+
T Consensus 160 -~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRR 238 (412)
T KOG3881|consen 160 -DPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRR 238 (412)
T ss_pred -CCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCc
Confidence 33467778888 789999999875443322211 1112336788999887 7778855 899999999997655
Q ss_pred cceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEE-eccccCCeEEEEECCCCcEEEEeec
Q 022019 207 DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYV-LHGQEGGVTHVQFSRDGNYLYTGGR 285 (304)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~ 285 (304)
++..+ .-...+++++...| ++.++++|..-|.+..||++.++.... +.+-.+.|+++..+|.+++|+++|
T Consensus 239 PV~~f-------d~~E~~is~~~l~p-~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~G- 309 (412)
T KOG3881|consen 239 PVAQF-------DFLENPISSTGLTP-SGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCG- 309 (412)
T ss_pred ceeEe-------ccccCcceeeeecC-CCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeec-
Confidence 55443 33356799999999 888999999999999999999998776 888999999999999999999999
Q ss_pred cCCeEEEEecccce
Q 022019 286 KDPYILCWDLRKAV 299 (304)
Q Consensus 286 ~d~~i~vwd~~~~~ 299 (304)
-|..|+|+|+.+.+
T Consensus 310 LDRyvRIhD~ktrk 323 (412)
T KOG3881|consen 310 LDRYVRIHDIKTRK 323 (412)
T ss_pred cceeEEEeecccch
Confidence 99999999999943
No 188
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.76 E-value=4.5e-17 Score=117.31 Aligned_cols=165 Identities=12% Similarity=0.102 Sum_probs=118.8
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCe-----eeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCcc
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGL-----LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRD 207 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~ 207 (304)
+++|.+++|++|+.+|.|.++.+++-. ............|..+++.++|. ..+|+++.||.|+-|..+...+.
T Consensus 17 a~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~gdG~V~gw~W~E~~es 94 (325)
T KOG0649|consen 17 AISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGGDGLVYGWEWNEEEES 94 (325)
T ss_pred hhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeeccCceEEEeeehhhhhh
Confidence 348899999999999999999986411 11111111112344599999998 56777888899999987653221
Q ss_pred c--eeeee---eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEE
Q 022019 208 F--EKYST---LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYT 282 (304)
Q Consensus 208 ~--~~~~~---~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 282 (304)
. +.... +.......-..|+++...|..+.+|.+| .|+.++-||+++++...++++|...|.++.--.....+++
T Consensus 95 ~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~Ag-GD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qils 173 (325)
T KOG0649|consen 95 LATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAG-GDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILS 173 (325)
T ss_pred ccchhhhhhcCccccCcccCCccceeEeccCCCcEEEec-CCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceee
Confidence 1 11111 1111011123488999999655555544 8999999999999999999999999999998556667999
Q ss_pred eeccCCeEEEEecccceee
Q 022019 283 GGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 283 ~~~~d~~i~vwd~~~~~~~ 301 (304)
|+ .||++++||+++++++
T Consensus 174 G~-EDGtvRvWd~kt~k~v 191 (325)
T KOG0649|consen 174 GA-EDGTVRVWDTKTQKHV 191 (325)
T ss_pred cC-CCccEEEEecccccee
Confidence 99 9999999999999876
No 189
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=1.2e-16 Score=136.62 Aligned_cols=236 Identities=18% Similarity=0.206 Sum_probs=152.9
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcC--CCCeEEEecCCCeEEEeeCCCCCC-ccc-cccccccccCCcc
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP--DGSSFLTSSEDKTLRIFSLPENGI-SYD-VNACSLAKDQDSY 110 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~--~~~~l~s~~~dg~v~vwd~~~~~~-~~~-~~~~~~~~~~~~~ 110 (304)
.+..|+.+..+.+..+. .-......|+.+.+-. |..++++|+.||.||||+-..... ..+ +......
T Consensus 1087 ~i~vwd~e~~~~l~~F~---n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~L------ 1157 (1387)
T KOG1517|consen 1087 RIRVWDWEKGRLLNGFD---NGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSL------ 1157 (1387)
T ss_pred eEEEEecccCceecccc---CCCCCCCccceeeeecccchhheeeeccCceEEEecccccccCCceeEEeeccc------
Confidence 34556666555554322 2234567899999976 556899999999999997543221 000 0000000
Q ss_pred ceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECC-CCcEEE
Q 022019 111 EASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP-TGTKIF 189 (304)
Q Consensus 111 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~ 189 (304)
........ +.-.-+.| .....+|+++++-..|+|||.........++.... ..|+++.-+- .|+.++
T Consensus 1158 s~~~~~~r-~~~~v~dW-------qQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~----t~vTaLS~~~~~gn~i~ 1225 (1387)
T KOG1517|consen 1158 SDQLPGAR-GTGLVVDW-------QQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSS----TLVTALSADLVHGNIIA 1225 (1387)
T ss_pred cccCccCC-CCCeeeeh-------hhhCCeEEecCCeeEEEEEecccceeEeecccCCC----ccceeecccccCCceEE
Confidence 00000000 11122334 44455666666788999999998877777665432 2667776554 368888
Q ss_pred EE-cCCeEEEEEcCCCCccceeeeeeeccccccccc--eeEEEeecCCCcEEEEEecCCeEEEEecCCceEeE--Eeccc
Q 022019 190 AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGI--MSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLY--VLHGQ 264 (304)
Q Consensus 190 ~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~ 264 (304)
+| .||.|++||.|..... ........|... |..+.+.+.+-..|++|+.||.|++||++...... ++..|
T Consensus 1226 AGfaDGsvRvyD~R~a~~d-----s~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~ 1300 (1387)
T KOG1517|consen 1226 AGFADGSVRVYDRRMAPPD-----SLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAH 1300 (1387)
T ss_pred EeecCCceEEeecccCCcc-----ccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeec
Confidence 88 9999999999975432 111222445555 89999999544569999999999999999743222 22233
Q ss_pred c--C-CeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 265 E--G-GVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 265 ~--~-~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
- + .++++..+++...+|+|+ . +.|.||++...
T Consensus 1301 ~~yGs~lTal~VH~hapiiAsGs-~-q~ikIy~~~G~ 1335 (1387)
T KOG1517|consen 1301 WEYGSALTALTVHEHAPIIASGS-A-QLIKIYSLSGE 1335 (1387)
T ss_pred cccCccceeeeeccCCCeeeecC-c-ceEEEEecChh
Confidence 2 3 599999999999999998 6 99999999654
No 190
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.75 E-value=2.4e-16 Score=129.00 Aligned_cols=234 Identities=13% Similarity=0.242 Sum_probs=166.2
Q ss_pred ccceeeeecCCCCceeEEEEcCCCC---eEEEecCCCeEEEeeCCCCCCcc----ccccccccccCCcc-----------
Q 022019 49 FYNQFRTSSIPNNFLKGIKWSPDGS---SFLTSSEDKTLRIFSLPENGISY----DVNACSLAKDQDSY----------- 110 (304)
Q Consensus 49 ~~~~~~~~~~h~~~V~~i~~s~~~~---~l~s~~~dg~v~vwd~~~~~~~~----~~~~~~~~~~~~~~----------- 110 (304)
.++....+.||.+.|.+++|...+. +|||+|.|..||||.+.-+.... +...... ......
T Consensus 180 ~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~-~~~~~f~~l~~i~~~is 258 (764)
T KOG1063|consen 180 SFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTL-SNLPVFMILEEIQYRIS 258 (764)
T ss_pred ceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccc-cCCceeeeeeeEEEEEe
Confidence 4466778999999999999987443 88999999999999975433111 1100000 000000
Q ss_pred ceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCC--eeeEEeecccccccccceEEEEECCCCcEE
Q 022019 111 EASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTG--LLRCTYRAYDAVDEITAAFSVAFNPTGTKI 188 (304)
Q Consensus 111 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 188 (304)
...+..+|..-|+++.| +|.+..|++++.|.++.+|.-.+. -.+.........+.....++..|+|+++.+
T Consensus 259 ~eall~GHeDWV~sv~W-------~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~i 331 (764)
T KOG1063|consen 259 FEALLMGHEDWVYSVWW-------HPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVI 331 (764)
T ss_pred hhhhhcCcccceEEEEE-------ccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEE
Confidence 01234578889999999 556778999999999999987643 333333332222223367899999999888
Q ss_pred EE-EcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC----CceEeEEecc
Q 022019 189 FA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED----NMELLYVLHG 263 (304)
Q Consensus 189 ~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~----~~~~~~~~~~ 263 (304)
++ |..|..++|.... ...........+|...|++++|+| .+.+|++.+.|.+-|+|-.- +...+..-.-
T Consensus 332 i~~g~~Gg~hlWkt~d-----~~~w~~~~~iSGH~~~V~dv~W~p-sGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQi 405 (764)
T KOG1063|consen 332 IAHGRTGGFHLWKTKD-----KTFWTQEPVISGHVDGVKDVDWDP-SGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQI 405 (764)
T ss_pred EEecccCcEEEEeccC-----ccceeeccccccccccceeeeecC-CCCEEEEeccccceeeecccccccceeeeccccc
Confidence 85 5999999998332 122444455589999999999999 78899999999999998653 2234444456
Q ss_pred ccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 264 QEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 264 ~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
|...++|++|-+....+++|+ +...+|+|+...
T Consensus 406 HGyDl~c~~~vn~~~~FVSgA-dEKVlRvF~aPk 438 (764)
T KOG1063|consen 406 HGYDLTCLSFVNEDLQFVSGA-DEKVLRVFEAPK 438 (764)
T ss_pred ccccceeeehccCCceeeecc-cceeeeeecCcH
Confidence 888899999988656677787 888999998743
No 191
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.74 E-value=3.1e-16 Score=119.19 Aligned_cols=199 Identities=18% Similarity=0.265 Sum_probs=136.6
Q ss_pred CCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
+-.+..++|++.-..||++..|-+|++||-... . ...+.......|.+++|.|.. +.
T Consensus 98 ~~dlr~~aWhqH~~~fava~nddvVriy~ksst-~----------------pt~Lks~sQrnvtclawRPls------as 154 (445)
T KOG2139|consen 98 EIDLRGVAWHQHIIAFAVATNDDVVRIYDKSST-C----------------PTKLKSVSQRNVTCLAWRPLS------AS 154 (445)
T ss_pred hcceeeEeechhhhhhhhhccCcEEEEeccCCC-C----------------CceecchhhcceeEEEeccCC------cc
Confidence 445788999997778899999999999987641 1 111222334689999998863 33
Q ss_pred EEEEEeCCCCEEEEEcCCC-eeeEE--------eecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccc
Q 022019 140 VFASTTRDHPIHLWDATTG-LLRCT--------YRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDF 208 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~~-~~~~~--------~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~ 208 (304)
.|++|+..| |.+|..... ..... .......+| ..|+++.|++||..++ ++ .|..|.|||..++...
T Consensus 155 elavgCr~g-IciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~- 231 (445)
T KOG2139|consen 155 ELAVGCRAG-ICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKI- 231 (445)
T ss_pred eeeeeecce-eEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcc-
Confidence 688888777 999987531 11110 011111122 3899999999999999 45 8899999999874321
Q ss_pred eeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC-CceEeEEeccccCCeEEEEECCCCcEEEEeeccC
Q 022019 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED-NMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKD 287 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d 287 (304)
.+. ....+.++-+.|+| ++.+|++++-|+..++|... +.....-.- ..+.|...+|+|+|++|+.+. .
T Consensus 232 ----pL~---~~glgg~slLkwSP-dgd~lfaAt~davfrlw~e~q~wt~erw~l-gsgrvqtacWspcGsfLLf~~--s 300 (445)
T KOG2139|consen 232 ----PLI---PKGLGGFSLLKWSP-DGDVLFAATCDAVFRLWQENQSWTKERWIL-GSGRVQTACWSPCGSFLLFAC--S 300 (445)
T ss_pred ----ccc---ccCCCceeeEEEcC-CCCEEEEecccceeeeehhcccceecceec-cCCceeeeeecCCCCEEEEEE--c
Confidence 111 12234588899999 77899999999999999554 333333333 355899999999999987776 3
Q ss_pred CeEEEEec
Q 022019 288 PYILCWDL 295 (304)
Q Consensus 288 ~~i~vwd~ 295 (304)
|.-++|.+
T Consensus 301 gsp~lysl 308 (445)
T KOG2139|consen 301 GSPRLYSL 308 (445)
T ss_pred CCceEEEE
Confidence 34445544
No 192
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.74 E-value=5e-15 Score=119.75 Aligned_cols=210 Identities=11% Similarity=0.164 Sum_probs=131.6
Q ss_pred CCceeEEEEcCCCCeEEEec-CCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 60 NNFLKGIKWSPDGSSFLTSS-EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~-~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
.+....++++|++++|++++ .++.|.+|++......... ....... .|..++++|++
T Consensus 34 ~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~---------------~~~~~~~-------~p~~i~~~~~g 91 (330)
T PRK11028 34 PGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFA---------------AESPLPG-------SPTHISTDHQG 91 (330)
T ss_pred CCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEe---------------eeecCCC-------CceEEEECCCC
Confidence 45577899999999887664 5788999998632110000 0000111 23445668999
Q ss_pred cEEEEEeC-CCCEEEEEcCC-CeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceeeeee
Q 022019 139 CVFASTTR-DHPIHLWDATT-GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 139 ~~l~~~~~-dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~~~~ 214 (304)
+++++++. ++.|.+|++.+ +.......... ....+.+++++|++++++ +. .++.|.+||+...+.........
T Consensus 92 ~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~---~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~ 168 (330)
T PRK11028 92 RFLFSASYNANCVSVSPLDKDGIPVAPIQIIE---GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAE 168 (330)
T ss_pred CEEEEEEcCCCeEEEEEECCCCCCCCceeecc---CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCc
Confidence 98888764 78999999964 32211111100 111456789999999987 44 78999999997632111000000
Q ss_pred eccccccccceeEEEeecCCCcEEEEEec-CCeEEEEecCC--c--eEeEEeccc------cCCeEEEEECCCCcEEEEe
Q 022019 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSY-SQTSAIYREDN--M--ELLYVLHGQ------EGGVTHVQFSRDGNYLYTG 283 (304)
Q Consensus 215 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~-dg~i~i~d~~~--~--~~~~~~~~~------~~~v~~~~~~~~~~~l~~~ 283 (304)
... . .......++|+| ++++++++.. ++.|.+|++.. + +.+..+..+ ......+.++|+|++|+++
T Consensus 169 ~~~-~-~g~~p~~~~~~p-dg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~ 245 (330)
T PRK11028 169 VTT-V-EGAGPRHMVFHP-NQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYAC 245 (330)
T ss_pred eec-C-CCCCCceEEECC-CCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEe
Confidence 000 1 122356899999 5666666655 89999999973 2 334444321 1223468899999999998
Q ss_pred eccCCeEEEEeccc
Q 022019 284 GRKDPYILCWDLRK 297 (304)
Q Consensus 284 ~~~d~~i~vwd~~~ 297 (304)
.+.++.|.+|++..
T Consensus 246 ~~~~~~I~v~~i~~ 259 (330)
T PRK11028 246 DRTASLISVFSVSE 259 (330)
T ss_pred cCCCCeEEEEEEeC
Confidence 75689999999964
No 193
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.74 E-value=4.9e-17 Score=125.02 Aligned_cols=178 Identities=17% Similarity=0.208 Sum_probs=136.1
Q ss_pred EEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeE---Eeeccc-ccccccceEEEEECCCCcEEE
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRC---TYRAYD-AVDEITAAFSVAFNPTGTKIF 189 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~-~~~~~~~v~~i~~~~~~~~l~ 189 (304)
+..+...+++.+.|.+. ..+.+++|+.|..|++|-+..+.... ...... -..|...|+++.|+|+|..++
T Consensus 8 i~wH~~~pv~s~dfq~n------~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLA 81 (434)
T KOG1009|consen 8 ISWHDHEPVYSVDFQKN------SLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLA 81 (434)
T ss_pred EEecCCCceEEEEeccC------cccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeee
Confidence 34445578888888553 22289999999999999987543222 222211 113555999999999999999
Q ss_pred EE-cCCeEEEEEcCC--------CCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEE
Q 022019 190 AG-YNKSVRVFDVHR--------PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYV 260 (304)
Q Consensus 190 ~~-~d~~i~v~d~~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 260 (304)
+| .+|.|.+|-... .....+..........+|...+..++|+| ++.++++++.|+.+++||+..|.....
T Consensus 82 Sg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~-d~~~l~s~s~dns~~l~Dv~~G~l~~~ 160 (434)
T KOG1009|consen 82 SGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSP-DSNFLVSGSVDNSVRLWDVHAGQLLAI 160 (434)
T ss_pred ecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccC-CCceeeeeeccceEEEEEeccceeEee
Confidence 76 889999998761 11111222333444567888999999999 788999999999999999999999999
Q ss_pred eccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccce
Q 022019 261 LHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 261 ~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
+..|...+..++|.|-++++++-+ .|...+.+.+...+
T Consensus 161 ~~dh~~yvqgvawDpl~qyv~s~s-~dr~~~~~~~~~~~ 198 (434)
T KOG1009|consen 161 LDDHEHYVQGVAWDPLNQYVASKS-SDRHPEGFSAKLKQ 198 (434)
T ss_pred ccccccccceeecchhhhhhhhhc-cCcccceeeeeeee
Confidence 999999999999999999999999 88877777776543
No 194
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=1.2e-16 Score=136.64 Aligned_cols=256 Identities=14% Similarity=0.219 Sum_probs=167.5
Q ss_pred hhcCCCchhhcHHhhccccccCcceeeecCCCcccccccceeeee-cCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCC
Q 022019 12 QQQIYSDTEVTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTS-SIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLP 90 (304)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~ 90 (304)
+..++....+...++.+...+.|..+.-...+......+..+... .+..+.=.-+.|.....+|+++|.-..|+|||..
T Consensus 1116 ~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~ 1195 (1387)
T KOG1517|consen 1116 ELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAH 1195 (1387)
T ss_pred eeecccchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecc
Confidence 334455666777888999999997654433333333333322221 2222222457888766677777778899999998
Q ss_pred CCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCe---eeEEeecc
Q 022019 91 ENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGL---LRCTYRAY 167 (304)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~ 167 (304)
.......+ .......++++.-. ...|+.+++|..||.|++||.+... .+..++.|
T Consensus 1196 ~E~~~~di----------------P~~s~t~vTaLS~~------~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h 1253 (1387)
T KOG1517|consen 1196 KEQVVADI----------------PYGSSTLVTALSAD------LVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREH 1253 (1387)
T ss_pred cceeEeec----------------ccCCCccceeeccc------ccCCceEEEeecCCceEEeecccCCccccceeeccc
Confidence 65443222 22223444544321 3357899999999999999988643 34455555
Q ss_pred cccccccceEEEEECCCCcE-EEE-EcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCC
Q 022019 168 DAVDEITAAFSVAFNPTGTK-IFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ 245 (304)
Q Consensus 168 ~~~~~~~~v~~i~~~~~~~~-l~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg 245 (304)
.. ..+|..+.+.+.|-. |++ +.+|.|++||+|.... ..+...... ....+.++++..++ ...++|+|+. +
T Consensus 1254 ~~---~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~--e~~~~iv~~-~~yGs~lTal~VH~-hapiiAsGs~-q 1325 (1387)
T KOG1517|consen 1254 ND---VEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSK--ETFLTIVAH-WEYGSALTALTVHE-HAPIIASGSA-Q 1325 (1387)
T ss_pred CC---cccceeEEeecCCCcceeeeccCCeEEEEecccCcc--cccceeeec-cccCccceeeeecc-CCCeeeecCc-c
Confidence 43 224889999987643 664 5999999999998411 111111111 11123589999999 7779999998 9
Q ss_pred eEEEEecCCceEeEEeccc-------cCCeEEEEECCCCcEEEEeeccCCeEEEEecccce
Q 022019 246 TSAIYREDNMELLYVLHGQ-------EGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 246 ~i~i~d~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
.|+||++. |+.+..++.+ .+.+.+++|+|..-.|++|+ .|.+|.||...++.
T Consensus 1326 ~ikIy~~~-G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~-~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1326 LIKIYSLS-GEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGS-ADSTVSIYSCEKPR 1384 (1387)
T ss_pred eEEEEecC-hhhhcccccCcccccCcCCCcceeeecchhHhhhhcc-CCceEEEeecCCcC
Confidence 99999984 4444444322 34689999999999999998 99999999887653
No 195
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.73 E-value=1.8e-14 Score=120.52 Aligned_cols=209 Identities=27% Similarity=0.414 Sum_probs=153.5
Q ss_pred eecCCC-CceeEEEE-cCCCC-eEEEecC-CCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 55 TSSIPN-NFLKGIKW-SPDGS-SFLTSSE-DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 55 ~~~~h~-~~V~~i~~-s~~~~-~l~s~~~-dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
.+.++. ..+..+.+ ++++. .++..+. |+.+.+|+... ..........|...+..+.|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~----------------~~~~~~~~~~~~~~v~~~~~--- 163 (466)
T COG2319 103 SLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLST----------------PGKLIRTLEGHSESVTSLAF--- 163 (466)
T ss_pred EEeccCCCceeeEEEECCCcceEEeccCCCCccEEEEEecC----------------CCeEEEEEecCcccEEEEEE---
Confidence 444433 47888888 88887 5555455 99999999874 01122244556677777776
Q ss_pred cceeCCCccEEEEEeC-CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCc-EEEE-EcCCeEEEEEcCCCCcc
Q 022019 131 MSASDPTSCVFASTTR-DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT-KIFA-GYNKSVRVFDVHRPGRD 207 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~-~~d~~i~v~d~~~~~~~ 207 (304)
+|++..+++++. |+.+++|++..+.....+..+.. .+.+++|+|++. .+++ +.|+.|++||.... ..
T Consensus 164 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~-~~ 233 (466)
T COG2319 164 ----SPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTD-----PVSSLAFSPDGGLLIASGSSDGTIRLWDLSTG-KL 233 (466)
T ss_pred ----CCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCC-----ceEEEEEcCCcceEEEEecCCCcEEEEECCCC-cE
Confidence 678878888885 99999999998777777766443 899999999998 5555 59999999987632 11
Q ss_pred ceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceE-eEEeccccCCeEEEEECCCCcEEEEeecc
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL-LYVLHGQEGGVTHVQFSRDGNYLYTGGRK 286 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 286 (304)
. .. ...+|.... ...|+| .+.++++++.|+.+++|+++.... +..+.+|...+.++.|+|++..+++++ .
T Consensus 234 ~---~~---~~~~~~~~~-~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~ 304 (466)
T COG2319 234 L---RS---TLSGHSDSV-VSSFSP-DGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGS-S 304 (466)
T ss_pred E---ee---ecCCCCcce-eEeECC-CCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEee-C
Confidence 1 10 224455543 338999 557888999999999999986654 444467888999999999999999887 7
Q ss_pred CCeEEEEecccceee
Q 022019 287 DPYILCWDLRKAVQV 301 (304)
Q Consensus 287 d~~i~vwd~~~~~~~ 301 (304)
|+.+.+|+..+....
T Consensus 305 d~~~~~~~~~~~~~~ 319 (466)
T COG2319 305 DGTVRLWDLETGKLL 319 (466)
T ss_pred CCcEEEEEcCCCceE
Confidence 899999998876543
No 196
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.73 E-value=1.9e-14 Score=107.74 Aligned_cols=223 Identities=13% Similarity=0.151 Sum_probs=141.0
Q ss_pred eeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcc----------------ccccccccccCC------ccceEEEeecCC
Q 022019 63 LKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISY----------------DVNACSLAKDQD------SYEASLVVTEGE 120 (304)
Q Consensus 63 V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~----------------~~~~~~~~~~~~------~~~~~~~~~~~~ 120 (304)
..+++|+.|...++.|..+| .+||+.+.-+... ..+-.....+.. ..+....-....
T Consensus 8 ~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~~ 86 (346)
T KOG2111|consen 8 TLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKER 86 (346)
T ss_pred eeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccCc
Confidence 44589999999998887776 7999986432200 000000000000 011111111112
Q ss_pred eEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcC-CCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEE
Q 022019 121 SVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDAT-TGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVR 197 (304)
Q Consensus 121 ~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~ 197 (304)
.+..+.|.....++.-....+++.- .+.|++|... +.+....+..... +..+.++.=..+..+|+ =| .-|.|.
T Consensus 87 ~i~el~f~~~I~~V~l~r~riVvvl-~~~I~VytF~~n~k~l~~~et~~N---PkGlC~~~~~~~k~~LafPg~k~GqvQ 162 (346)
T KOG2111|consen 87 CIIELSFNSEIKAVKLRRDRIVVVL-ENKIYVYTFPDNPKLLHVIETRSN---PKGLCSLCPTSNKSLLAFPGFKTGQVQ 162 (346)
T ss_pred EEEEEEeccceeeEEEcCCeEEEEe-cCeEEEEEcCCChhheeeeecccC---CCceEeecCCCCceEEEcCCCccceEE
Confidence 2333333222111111344666664 5679999987 4444454443331 12344444333445666 35 779999
Q ss_pred EEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCe-EEEEecCCceEeEEeccc--cCCeEEEEEC
Q 022019 198 VFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQT-SAIYREDNMELLYVLHGQ--EGGVTHVQFS 274 (304)
Q Consensus 198 v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~--~~~v~~~~~~ 274 (304)
|-|+...... ......+|...|.+++.+- .|.++|++|..|+ |||||..+++++.+++.. ...|.+++||
T Consensus 163 i~dL~~~~~~------~p~~I~AH~s~Iacv~Ln~-~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFS 235 (346)
T KOG2111|consen 163 IVDLASTKPN------APSIINAHDSDIACVALNL-QGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFS 235 (346)
T ss_pred EEEhhhcCcC------CceEEEcccCceeEEEEcC-CccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeC
Confidence 9999764221 1122378999999999999 7889999999998 899999999999999733 3479999999
Q ss_pred CCCcEEEEeeccCCeEEEEecccc
Q 022019 275 RDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 275 ~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
|++.+|++++ +.|+|+++.++..
T Consensus 236 p~~s~LavsS-dKgTlHiF~l~~~ 258 (346)
T KOG2111|consen 236 PNSSWLAVSS-DKGTLHIFSLRDT 258 (346)
T ss_pred CCccEEEEEc-CCCeEEEEEeecC
Confidence 9999999999 9999999998763
No 197
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.72 E-value=2.5e-15 Score=130.40 Aligned_cols=224 Identities=15% Similarity=0.181 Sum_probs=150.7
Q ss_pred eeeeecCCCCceeEEEEcCC-CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEE-eecCCeEEEEeecC
Q 022019 52 QFRTSSIPNNFLKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV-VTEGESVYDFCWFP 129 (304)
Q Consensus 52 ~~~~~~~h~~~V~~i~~s~~-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~ 129 (304)
.++.+..|...|..++.++. +.+|+|||.||+|++|+...-.... ........ ...+..+..+..
T Consensus 1040 lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~-----------~s~rS~ltys~~~sr~~~vt~-- 1106 (1431)
T KOG1240|consen 1040 LVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEG-----------GSARSELTYSPEGSRVEKVTM-- 1106 (1431)
T ss_pred EeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCc-----------ceeeeeEEEeccCCceEEEEe--
Confidence 44567789999999999884 5999999999999999987432211 11111122 225566666655
Q ss_pred ccceeCCCccEEEEEeCCCCEEEEEcCCC--eeeE--EeecccccccccceEEEEECCC-Cc-EEEE-EcCCeEEEEEcC
Q 022019 130 HMSASDPTSCVFASTTRDHPIHLWDATTG--LLRC--TYRAYDAVDEITAAFSVAFNPT-GT-KIFA-GYNKSVRVFDVH 202 (304)
Q Consensus 130 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~--~~~~~~~~~~~~~v~~i~~~~~-~~-~l~~-~~d~~i~v~d~~ 202 (304)
-+.+..+|+++.||.|.+.++... .... .............|..-+|... +. .++. ...+.|..||++
T Consensus 1107 -----~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r 1181 (1431)
T KOG1240|consen 1107 -----CGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTR 1181 (1431)
T ss_pred -----ccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecch
Confidence 447889999999999999998752 1111 1111111111112333344332 33 4444 488999999998
Q ss_pred CCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec-cccCCeEEEEECCC---Cc
Q 022019 203 RPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH-GQEGGVTHVQFSRD---GN 278 (304)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~---~~ 278 (304)
+...... .+ .....+.|++++.+| .+.++++|+..|.+.+||++-+.++..+. ++..++..+..+|- ..
T Consensus 1182 ~~~~~w~----lk--~~~~hG~vTSi~idp-~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S 1254 (1431)
T KOG1240|consen 1182 MRHDAWR----LK--NQLRHGLVTSIVIDP-WCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQES 1254 (1431)
T ss_pred hhhhHHh----hh--cCccccceeEEEecC-CceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCc
Confidence 7432221 11 133456799999999 88899999999999999999999998886 44567777777653 35
Q ss_pred EEEEeec-cCCeEEEEeccccee
Q 022019 279 YLYTGGR-KDPYILCWDLRKAVQ 300 (304)
Q Consensus 279 ~l~~~~~-~d~~i~vwd~~~~~~ 300 (304)
..++++. ..+.|.+|++.+|.+
T Consensus 1255 ~~vs~~~~~~nevs~wn~~~g~~ 1277 (1431)
T KOG1240|consen 1255 VSVSAGSSSNNEVSTWNMETGLR 1277 (1431)
T ss_pred eEEEecccCCCceeeeecccCcc
Confidence 6666663 578999999998854
No 198
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.72 E-value=3.3e-15 Score=122.36 Aligned_cols=201 Identities=14% Similarity=0.295 Sum_probs=144.4
Q ss_pred ceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEE
Q 022019 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF 141 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 141 (304)
.|..++|-|||..|+.+..+ .+.+||..++....+ ..+|...|++++| +.+|+.+
T Consensus 14 ci~d~afkPDGsqL~lAAg~-rlliyD~ndG~llqt-----------------LKgHKDtVycVAy-------s~dGkrF 68 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAGS-RLLVYDTSDGTLLQP-----------------LKGHKDTVYCVAY-------AKDGKRF 68 (1081)
T ss_pred chheeEECCCCceEEEecCC-EEEEEeCCCcccccc-----------------cccccceEEEEEE-------ccCCcee
Confidence 79999999999988877644 799999997766543 3456689999998 8899999
Q ss_pred EEEeCCCCEEEEEcCC-C-------eeeEEeeccc------------------------ccccccceEEEEECCCCcEEE
Q 022019 142 ASTTRDHPIHLWDATT-G-------LLRCTYRAYD------------------------AVDEITAAFSVAFNPTGTKIF 189 (304)
Q Consensus 142 ~~~~~dg~i~i~d~~~-~-------~~~~~~~~~~------------------------~~~~~~~v~~i~~~~~~~~l~ 189 (304)
++|+.|..|.+|+-.- | ..++.+.... .......+.+.+|..||++++
T Consensus 69 ASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqyla 148 (1081)
T KOG1538|consen 69 ASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLA 148 (1081)
T ss_pred ccCCCceeEEEecccccceeeeccCCeeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEE
Confidence 9999999999998542 1 1111111100 011234688999999999999
Q ss_pred EE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCC----cEEEEEecCCeEEEEecCCceEeEEeccc
Q 022019 190 AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHT----GMLAIGSYSQTSAIYREDNMELLYVLHGQ 264 (304)
Q Consensus 190 ~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 264 (304)
.| .+|+|.+-+-.. .+ ........+...+|.+++|+|..+ ..+++.....++.+|.+. |+.+..-+.-
T Consensus 149 lG~~nGTIsiRNk~g--Ee----k~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~L 221 (1081)
T KOG1538|consen 149 LGMFNGTISIRNKNG--EE----KVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDRAL 221 (1081)
T ss_pred EeccCceEEeecCCC--Cc----ceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec-ceeecccccC
Confidence 88 999999975432 21 112222356778899999999543 367777777788888773 4444333323
Q ss_pred cCCeEEEEECCCCcEEEEeeccCCeEEEEec
Q 022019 265 EGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 265 ~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
.-.-.++.+.|+|.+++.|| .|+.+.+|--
T Consensus 222 ~FdP~CisYf~NGEy~LiGG-sdk~L~~fTR 251 (1081)
T KOG1538|consen 222 NFDPCCISYFTNGEYILLGG-SDKQLSLFTR 251 (1081)
T ss_pred CCCchhheeccCCcEEEEcc-CCCceEEEee
Confidence 33457899999999999999 9999998853
No 199
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.72 E-value=3.3e-15 Score=110.18 Aligned_cols=113 Identities=20% Similarity=0.381 Sum_probs=86.9
Q ss_pred ceEEEEECCCCcEEE--EE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEec---CCeEE
Q 022019 175 AAFSVAFNPTGTKIF--AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY---SQTSA 248 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~--~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~---dg~i~ 248 (304)
+|.+++|+|+|+.++ .| .++.|.+||++. ..+..+ ....+..+.|+| .++++++|+. .|.|.
T Consensus 61 ~I~~~~WsP~g~~favi~g~~~~~v~lyd~~~-----~~i~~~------~~~~~n~i~wsP-~G~~l~~~g~~n~~G~l~ 128 (194)
T PF08662_consen 61 PIHDVAWSPNGNEFAVIYGSMPAKVTLYDVKG-----KKIFSF------GTQPRNTISWSP-DGRFLVLAGFGNLNGDLE 128 (194)
T ss_pred ceEEEEECcCCCEEEEEEccCCcccEEEcCcc-----cEeEee------cCCCceEEEECC-CCCEEEEEEccCCCcEEE
Confidence 699999999999877 34 678999999963 121221 234577899999 6777777764 46799
Q ss_pred EEecCCceEeEEeccccCCeEEEEECCCCcEEEEeec-----cCCeEEEEecccceeee
Q 022019 249 IYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGR-----KDPYILCWDLRKAVQVV 302 (304)
Q Consensus 249 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----~d~~i~vwd~~~~~~~~ 302 (304)
+||.++.+.+.+.. |. .++.++|+|||++|+++.. .|+.++||+.. |+++.
T Consensus 129 ~wd~~~~~~i~~~~-~~-~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l~ 184 (194)
T PF08662_consen 129 FWDVRKKKKISTFE-HS-DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLLY 184 (194)
T ss_pred EEECCCCEEeeccc-cC-cEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEeE
Confidence 99999999888776 33 4789999999999999873 37889999994 65543
No 200
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.71 E-value=1.7e-16 Score=126.50 Aligned_cols=147 Identities=14% Similarity=0.212 Sum_probs=112.9
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeee
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~ 212 (304)
.++|+|.-|+++++||.|++|. ++|....++..... +|+|++|.|+.+.++-+..+.+.|=.+......+
T Consensus 111 RW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~-----~v~c~~W~p~S~~vl~c~g~h~~IKpL~~n~k~i---- 180 (737)
T KOG1524|consen 111 RWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEE-----SIRCARWAPNSNSIVFCQGGHISIKPLAANSKII---- 180 (737)
T ss_pred ccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCc-----eeEEEEECCCCCceEEecCCeEEEeeccccccee----
Confidence 3488999999999999999998 55655544443333 8999999999888886666777776665432211
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
...+|.+.|.++.|+| ...++++|++|-..+|||. .|.+++.-..|+.+|++++|.|+ +.++.++ -+++++
T Consensus 181 ----~WkAHDGiiL~~~W~~-~s~lI~sgGED~kfKvWD~-~G~~Lf~S~~~ey~ITSva~npd-~~~~v~S--~nt~R~ 251 (737)
T KOG1524|consen 181 ----RWRAHDGLVLSLSWST-QSNIIASGGEDFRFKIWDA-QGANLFTSAAEEYAITSVAFNPE-KDYLLWS--YNTARF 251 (737)
T ss_pred ----EEeccCcEEEEeecCc-cccceeecCCceeEEeecc-cCcccccCChhccceeeeeeccc-cceeeee--eeeeee
Confidence 1268999999999999 7789999999999999996 67788888889999999999999 5555555 455665
Q ss_pred Eecccc
Q 022019 293 WDLRKA 298 (304)
Q Consensus 293 wd~~~~ 298 (304)
=..+.|
T Consensus 252 ~~p~~G 257 (737)
T KOG1524|consen 252 SSPRVG 257 (737)
T ss_pred cCCCcc
Confidence 444444
No 201
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.71 E-value=2e-14 Score=120.22 Aligned_cols=209 Identities=28% Similarity=0.457 Sum_probs=154.3
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCC-CccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENG-ISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
....|...+.++.+.+.+..++.++.|+.+.+|+..... .... +...+...+..+.+ .
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~-----~ 118 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKS----------------LEGLHDSSVSKLAL-----S 118 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEE----------------EeccCCCceeeEEE-----E
Confidence 456899999999999999999999999999999988653 1110 11101123333333 1
Q ss_pred eCCCcc-EEEEEeC-CCCEEEEEcCC-CeeeEEeecccccccccceEEEEECCCCcEEEEE-c-CCeEEEEEcCCCCccc
Q 022019 134 SDPTSC-VFASTTR-DHPIHLWDATT-GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y-NKSVRVFDVHRPGRDF 208 (304)
Q Consensus 134 ~~~~~~-~l~~~~~-dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~-d~~i~v~d~~~~~~~~ 208 (304)
++++. .++..+. |+.+.+|+... ......+..+.. .|..+.|+|++..++.+ . ++.+++|++...
T Consensus 119 -~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 188 (466)
T COG2319 119 -SPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSE-----SVTSLAFSPDGKLLASGSSLDGTIKLWDLRTG---- 188 (466)
T ss_pred -CCCcceEEeccCCCCccEEEEEecCCCeEEEEEecCcc-----cEEEEEECCCCCEEEecCCCCCceEEEEcCCC----
Confidence 33444 4555444 99999999987 666666666654 88899999999877755 4 999999999761
Q ss_pred eeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeE-EeccccCCeEEEEECCCCcEEEEeeccC
Q 022019 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLY-VLHGQEGGVTHVQFSRDGNYLYTGGRKD 287 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~d 287 (304)
..... ..+|...+.+++|+|++..++++++.|+.|++||...+..+. .+.+|.... ...|+|++.++++++ .|
T Consensus 189 ~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~d 262 (466)
T COG2319 189 KPLST----LAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGS-SD 262 (466)
T ss_pred ceEEe----eccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEec-CC
Confidence 11111 244788899999999444355555899999999998777777 688888775 448999998888888 99
Q ss_pred CeEEEEeccccee
Q 022019 288 PYILCWDLRKAVQ 300 (304)
Q Consensus 288 ~~i~vwd~~~~~~ 300 (304)
+.+++|+++....
T Consensus 263 ~~~~~~~~~~~~~ 275 (466)
T COG2319 263 GTIRLWDLRSSSS 275 (466)
T ss_pred CcEEEeeecCCCc
Confidence 9999999987654
No 202
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.71 E-value=1.8e-15 Score=121.51 Aligned_cols=228 Identities=15% Similarity=0.190 Sum_probs=152.9
Q ss_pred CCCCceeEEEEcCCCCeE-EEecCCCeEEEeeCCCCCCcccccc----ccccccCCccceEEEeecCC------------
Q 022019 58 IPNNFLKGIKWSPDGSSF-LTSSEDKTLRIFSLPENGISYDVNA----CSLAKDQDSYEASLVVTEGE------------ 120 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l-~s~~~dg~v~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~------------ 120 (304)
.|...-+.|..+|||+|+ |||.+--.|++||+.+..+..+... ..+..-.+.....+.+....
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy 128 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHY 128 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCeee
Confidence 578888999999999975 5677889999999986544221110 00000001111111111111
Q ss_pred ------eEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC
Q 022019 121 ------SVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (304)
Q Consensus 121 ------~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d 193 (304)
.-.+++++ .|... |.+++....|+=++++.|..+..+..... .++++..++...+|++| .+
T Consensus 129 ~~RIP~~GRDm~y~------~~scD-ly~~gsg~evYRlNLEqGrfL~P~~~~~~-----~lN~v~in~~hgLla~Gt~~ 196 (703)
T KOG2321|consen 129 RTRIPKFGRDMKYH------KPSCD-LYLVGSGSEVYRLNLEQGRFLNPFETDSG-----ELNVVSINEEHGLLACGTED 196 (703)
T ss_pred eeecCcCCcccccc------CCCcc-EEEeecCcceEEEEccccccccccccccc-----cceeeeecCccceEEecccC
Confidence 11122221 12233 44555566799999999998888876654 89999999999999988 79
Q ss_pred CeEEEEEcCCCCccceeeeeeecccccc-----ccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec-cccCC
Q 022019 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQ-----AGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH-GQEGG 267 (304)
Q Consensus 194 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~ 267 (304)
|.|..||.+..+......... ....+ ...|+++.|+. ++..+++|+.+|.+.|||++..+++..-. +..-+
T Consensus 197 g~VEfwDpR~ksrv~~l~~~~--~v~s~pg~~~~~svTal~F~d-~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~p 273 (703)
T KOG2321|consen 197 GVVEFWDPRDKSRVGTLDAAS--SVNSHPGGDAAPSVTALKFRD-DGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELP 273 (703)
T ss_pred ceEEEecchhhhhheeeeccc--ccCCCccccccCcceEEEecC-CceeEEeeccCCcEEEEEcccCCceeecccCCccc
Confidence 999999999854432221111 11222 23499999998 68899999999999999999998876554 33458
Q ss_pred eEEEEECCC--CcEEEEeeccCCeEEEEecccceeee
Q 022019 268 VTHVQFSRD--GNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 268 v~~~~~~~~--~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
|..+.|.+. +..|++. +...++|||-.+|+...
T Consensus 274 i~~l~~~~~~~q~~v~S~--Dk~~~kiWd~~~Gk~~a 308 (703)
T KOG2321|consen 274 IKKLDWQDTDQQNKVVSM--DKRILKIWDECTGKPMA 308 (703)
T ss_pred eeeecccccCCCceEEec--chHHhhhcccccCCcee
Confidence 999999775 4566665 47789999999998654
No 203
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.70 E-value=4.3e-15 Score=111.25 Aligned_cols=213 Identities=16% Similarity=0.228 Sum_probs=152.2
Q ss_pred cceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecC
Q 022019 50 YNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP 129 (304)
Q Consensus 50 ~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 129 (304)
++..+++..|...|++|+|+|..+.|++|+.|..-.||....+ .........+.++...+++.|
T Consensus 45 w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~--------------~~WkptlvLlRiNrAAt~V~W-- 108 (361)
T KOG1523|consen 45 WEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSG--------------GTWKPTLVLLRINRAATCVKW-- 108 (361)
T ss_pred ceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCC--------------CeeccceeEEEeccceeeEee--
Confidence 4566788999999999999999999999999999999987422 123334467778889999999
Q ss_pred ccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCcc-
Q 022019 130 HMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRD- 207 (304)
Q Consensus 130 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~- 207 (304)
+|.++.|++|+..+.|.||-++....-..-+. -.....+.|.+++|+|++-++++| .|+..+||..--.+-.
T Consensus 109 -----sP~enkFAVgSgar~isVcy~E~ENdWWVsKh-ikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vde 182 (361)
T KOG1523|consen 109 -----SPKENKFAVGSGARLISVCYYEQENDWWVSKH-IKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDE 182 (361)
T ss_pred -----cCcCceEEeccCccEEEEEEEecccceehhhh-hCCccccceeeeeccCCcceecccccCcceeEEEEeeecccc
Confidence 77899999999999999999876543321111 111233489999999999999976 9999999976321100
Q ss_pred ---------ceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce-EeEEeccccCCeEEEEECCCC
Q 022019 208 ---------FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME-LLYVLHGQEGGVTHVQFSRDG 277 (304)
Q Consensus 208 ---------~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~~~ 277 (304)
...+..+........+.+..+.|+| .+..|+-.+.|+.+.+-|..... .+..+....-+..++.|-.+.
T Consensus 183 kpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~-sG~~lawv~Hds~v~~~da~~p~~~v~~~~~~~lP~ls~~~ise~ 261 (361)
T KOG1523|consen 183 KPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSP-SGNRLAWVGHDSTVSFVDAAGPSERVQSVATAQLPLLSVSWISEN 261 (361)
T ss_pred CCCCCCCccCCcHHHHHHhhccCCCceeeeEeCC-CCCEeeEecCCCceEEeecCCCchhccchhhccCCceeeEeecCC
Confidence 0111222222234567899999999 77788999999999999987654 344444344677888886544
Q ss_pred cEEEEeeccC
Q 022019 278 NYLYTGGRKD 287 (304)
Q Consensus 278 ~~l~~~~~~d 287 (304)
. ++.++ .|
T Consensus 262 ~-vv~ag-~~ 269 (361)
T KOG1523|consen 262 S-VVAAG-YD 269 (361)
T ss_pred c-eeecC-CC
Confidence 3 33344 44
No 204
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.70 E-value=1.5e-14 Score=120.46 Aligned_cols=198 Identities=12% Similarity=0.091 Sum_probs=122.1
Q ss_pred ecCCCCceeEEEEcCCCCeEEEec---CCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 56 SSIPNNFLKGIKWSPDGSSFLTSS---EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 56 ~~~h~~~V~~i~~s~~~~~l~s~~---~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
+..+...+...+|+|||+.|+..+ .+..|.+|++.+++...- ......+....
T Consensus 194 lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l------------------~~~~~~~~~~~------ 249 (429)
T PRK03629 194 VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV------------------ASFPRHNGAPA------ 249 (429)
T ss_pred eecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEc------------------cCCCCCcCCeE------
Confidence 345667899999999999888654 245788999875532100 00011122334
Q ss_pred eeCCCccEEEEE-eCCC--CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEE--EcCCCC
Q 022019 133 ASDPTSCVFAST-TRDH--PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVF--DVHRPG 205 (304)
Q Consensus 133 ~~~~~~~~l~~~-~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~--d~~~~~ 205 (304)
|+|||+.|+.. +.+| .|++||+.+++....... . ..+....|+|+|+.|+ ++ .++...|| |+..+
T Consensus 250 -~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~-~-----~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g- 321 (429)
T PRK03629 250 -FSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG-R-----SNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGG- 321 (429)
T ss_pred -ECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEccCC-C-----CCcCceEECCCCCEEEEEeCCCCCceEEEEECCCC-
Confidence 48899888765 4455 489999988765443222 1 1567899999999887 55 34444555 55432
Q ss_pred ccceeeeeeeccccccccceeEEEeecCCCcEEEEEe-cC--CeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEE
Q 022019 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-YS--QTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYT 282 (304)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~d--g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 282 (304)
... .+. ..........|+|+ +..|+..+ .+ ..|.+||+.+++.. .+.. ........|+|||++|+.
T Consensus 322 -~~~---~lt----~~~~~~~~~~~SpD-G~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~-~~~~~~p~~SpDG~~i~~ 390 (429)
T PRK03629 322 -APQ---RIT----WEGSQNQDADVSSD-GKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTD-TFLDETPSIAPNGTMVIY 390 (429)
T ss_pred -CeE---Eee----cCCCCccCEEECCC-CCEEEEEEccCCCceEEEEECCCCCeE-EeCC-CCCCCCceECCCCCEEEE
Confidence 111 111 11223457889994 55555544 33 35888999877643 3332 123456889999999998
Q ss_pred eeccCCe---EEEEeccc
Q 022019 283 GGRKDPY---ILCWDLRK 297 (304)
Q Consensus 283 ~~~~d~~---i~vwd~~~ 297 (304)
++ .++. +.++++..
T Consensus 391 ~s-~~~~~~~l~~~~~~G 407 (429)
T PRK03629 391 SS-SQGMGSVLNLVSTDG 407 (429)
T ss_pred EE-cCCCceEEEEEECCC
Confidence 88 6653 67777743
No 205
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.69 E-value=6.2e-16 Score=124.70 Aligned_cols=70 Identities=20% Similarity=0.329 Sum_probs=62.8
Q ss_pred cceeEEEeecCCCcEEEEEecCCeEEEEecCCc-eEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 223 GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM-ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 223 ~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
..|..++.+| +|..|++|+.|+.+..||+.-. ++.+++.-|...+++++|++.-.++++|+ .||++.|+.
T Consensus 608 kwiS~msihp-~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~s-dDgtv~Vfh 678 (733)
T KOG0650|consen 608 KWISSMSIHP-NGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGS-DDGTVIVFH 678 (733)
T ss_pred eeeeeeeecC-CCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeec-CCCcEEEEe
Confidence 3488999999 7888999999999999999754 68888999999999999999999999999 999999984
No 206
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.68 E-value=2.5e-14 Score=119.50 Aligned_cols=201 Identities=15% Similarity=0.117 Sum_probs=124.5
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCC---CeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSED---KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~d---g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
.+..|...+.+.+|+|||+.|+.++.+ ..|.+||+.++... ............
T Consensus 198 ~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~------------------~l~~~~g~~~~~------ 253 (433)
T PRK04922 198 TILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRE------------------LVASFRGINGAP------ 253 (433)
T ss_pred EeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEE------------------EeccCCCCccCc------
Confidence 345677789999999999999887643 46999998755321 000011112233
Q ss_pred ceeCCCccEEE-EEeCCC--CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCe--EEEEEcCCC
Q 022019 132 SASDPTSCVFA-STTRDH--PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKS--VRVFDVHRP 204 (304)
Q Consensus 132 ~~~~~~~~~l~-~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~--i~v~d~~~~ 204 (304)
+|+|+|+.++ +.+.+| .|++||+.+++... +..+.. .....+|+|||+.|+ ++ .++. |+++|+..+
T Consensus 254 -~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~-lt~~~~-----~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g 326 (433)
T PRK04922 254 -SFSPDGRRLALTLSRDGNPEIYVMDLGSRQLTR-LTNHFG-----IDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGG 326 (433)
T ss_pred -eECCCCCEEEEEEeCCCCceEEEEECCCCCeEE-CccCCC-----CccceEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 4488998765 445555 59999998876543 322221 345789999999888 44 4454 666666442
Q ss_pred CccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC-C--eEEEEecCCceEeEEeccccCCeEEEEECCCCcEEE
Q 022019 205 GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-Q--TSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-g--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 281 (304)
. .. .+.. . .......+|+| ++..|+..+.+ + .|.+||+.+++.. .+. +........|+|||++|+
T Consensus 327 ~--~~---~lt~--~--g~~~~~~~~Sp-DG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~spdG~~i~ 394 (433)
T PRK04922 327 S--AE---RLTF--Q--GNYNARASVSP-DGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSFAPNGSMVL 394 (433)
T ss_pred C--eE---Eeec--C--CCCccCEEECC-CCCEEEEEECCCCceeEEEEECCCCCeE-ECC-CCCCCCCceECCCCCEEE
Confidence 1 11 1111 1 12244689999 55555554433 3 5999999877654 343 233456789999999988
Q ss_pred Eeecc--CCeEEEEecccc
Q 022019 282 TGGRK--DPYILCWDLRKA 298 (304)
Q Consensus 282 ~~~~~--d~~i~vwd~~~~ 298 (304)
..+.. .+.|.++++..+
T Consensus 395 ~~s~~~g~~~L~~~~~~g~ 413 (433)
T PRK04922 395 YATREGGRGVLAAVSTDGR 413 (433)
T ss_pred EEEecCCceEEEEEECCCC
Confidence 77622 246778887543
No 207
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.68 E-value=1.1e-15 Score=115.59 Aligned_cols=231 Identities=15% Similarity=0.259 Sum_probs=155.0
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCC-ccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGI-SYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (304)
..+-|.++.|...|.+||||..+|.|.++.-..... .+...... ........-.....-...|..+.|.+. .+
T Consensus 24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~f-qshepEFDYLkSleieEKinkIrw~~~-----~n 97 (433)
T KOG1354|consen 24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEF-QSHEPEFDYLKSLEIEEKINKIRWLDD-----GN 97 (433)
T ss_pred hhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeee-eccCcccchhhhhhhhhhhhhceecCC-----CC
Confidence 456799999999999999999999999997543321 11110000 000001111111222356777888653 34
Q ss_pred ccEEEEEeCCCCEEEEEcCCCeeeE---------------Ee-----eccc-----------ccccccceEEEEECCCCc
Q 022019 138 SCVFASTTRDHPIHLWDATTGLLRC---------------TY-----RAYD-----------AVDEITAAFSVAFNPTGT 186 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~~~~---------------~~-----~~~~-----------~~~~~~~v~~i~~~~~~~ 186 (304)
...++....|.+|++|.+....... .+ ..+. ...|...|.+|.++.|+.
T Consensus 98 ~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~E 177 (433)
T KOG1354|consen 98 LAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKE 177 (433)
T ss_pred ccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccc
Confidence 4567778889999999886422111 00 0000 123555789999999999
Q ss_pred EEEEEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceE------eEE
Q 022019 187 KIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL------LYV 260 (304)
Q Consensus 187 ~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~------~~~ 260 (304)
.++++.|=.|.+|.++.....+..+.............|++..|+|....+++-.+..|+|++.|++...+ +..
T Consensus 178 t~lSADdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfE 257 (433)
T KOG1354|consen 178 TFLSADDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFE 257 (433)
T ss_pred eEeeccceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhc
Confidence 99999999999999987766666555444444445566999999998788899999999999999985421 111
Q ss_pred e----------ccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 261 L----------HGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 261 ~----------~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
. ..--..|..+.|+++|+|+++-. =-+|++||+..
T Consensus 258 epedp~~rsffseiIsSISDvKFs~sGryilsRD--yltvk~wD~nm 302 (433)
T KOG1354|consen 258 EPEDPSSRSFFSEIISSISDVKFSHSGRYILSRD--YLTVKLWDLNM 302 (433)
T ss_pred cccCCcchhhHHHHhhhhhceEEccCCcEEEEec--cceeEEEeccc
Confidence 1 11123688999999999999754 47899999943
No 208
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.67 E-value=5e-14 Score=117.92 Aligned_cols=202 Identities=14% Similarity=0.145 Sum_probs=126.9
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecC---CCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSE---DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~---dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
.+..|...+.+.+|+|||+.|+..+. +..|.+||+.++... ........+....|
T Consensus 196 ~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~------------------~l~~~~g~~~~~~~---- 253 (435)
T PRK05137 196 YLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE------------------LVGNFPGMTFAPRF---- 253 (435)
T ss_pred EEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE------------------EeecCCCcccCcEE----
Confidence 45678889999999999998887653 468999999755321 11111223334444
Q ss_pred ceeCCCccEEE-EEeCCCC--EEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCC--eEEEEEcCCC
Q 022019 132 SASDPTSCVFA-STTRDHP--IHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNK--SVRVFDVHRP 204 (304)
Q Consensus 132 ~~~~~~~~~l~-~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~--~i~v~d~~~~ 204 (304)
+|+|+.|+ +.+.++. |++||+.++.... +..+.. ......|+|||+.|+ ++ .++ .|+++|+...
T Consensus 254 ---SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~-Lt~~~~-----~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~ 324 (435)
T PRK05137 254 ---SPDGRKVVMSLSQGGNTDIYTMDLRSGTTTR-LTDSPA-----IDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGS 324 (435)
T ss_pred ---CCCCCEEEEEEecCCCceEEEEECCCCceEE-ccCCCC-----ccCceeEcCCCCEEEEEECCCCCCeEEEEECCCC
Confidence 88998765 4555554 7788988776543 332221 455789999999888 44 333 6778887542
Q ss_pred CccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC---CeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEE
Q 022019 205 GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS---QTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 281 (304)
... .+. .....+....|+| ++..|+..+.+ ..|.+||+..+.. ..+. ....+..+.|+|||++|+
T Consensus 325 --~~~---~lt----~~~~~~~~~~~Sp-dG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt-~~~~~~~p~~spDG~~i~ 392 (435)
T PRK05137 325 --NPR---RIS----FGGGRYSTPVWSP-RGDLIAFTKQGGGQFSIGVMKPDGSGE-RILT-SGFLVEGPTWAPNGRVIM 392 (435)
T ss_pred --CeE---Eee----cCCCcccCeEECC-CCCEEEEEEcCCCceEEEEEECCCCce-Eecc-CCCCCCCCeECCCCCEEE
Confidence 111 111 1123356688999 45555554433 3588888755433 3333 223467899999999987
Q ss_pred EeeccC-----CeEEEEecccce
Q 022019 282 TGGRKD-----PYILCWDLRKAV 299 (304)
Q Consensus 282 ~~~~~d-----~~i~vwd~~~~~ 299 (304)
..+... ..|.++|+..+.
T Consensus 393 ~~~~~~~~~~~~~L~~~dl~g~~ 415 (435)
T PRK05137 393 FFRQTPGSGGAPKLYTVDLTGRN 415 (435)
T ss_pred EEEccCCCCCcceEEEEECCCCc
Confidence 765222 368888886643
No 209
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.67 E-value=4.1e-14 Score=119.06 Aligned_cols=216 Identities=16% Similarity=0.228 Sum_probs=146.9
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+.-|.+.|+++.|+++|.+|++|+..|.+.+|.+.+++. .++..-+.+|..+.+
T Consensus 246 ~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~k------------------qfLPRLgs~I~~i~v------- 300 (792)
T KOG1963|consen 246 LLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKK------------------QFLPRLGSPILHIVV------- 300 (792)
T ss_pred EEEecccccceeEEecCCceEeecccceEEEEEeecCCCc------------------ccccccCCeeEEEEE-------
Confidence 6678999999999999999999999999999999987652 133344578888877
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeeccccc------ccccceEEEEECCC-CcEEEEEcCCeEEEEEcCCCCcc
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAV------DEITAAFSVAFNPT-GTKIFAGYNKSVRVFDVHRPGRD 207 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------~~~~~v~~i~~~~~-~~~l~~~~d~~i~v~d~~~~~~~ 207 (304)
+||+.+.+....|..|.+-...+.....++.+.... ....-.+.+.++|. +..++.|..+.|.+||+.+....
T Consensus 301 S~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i 380 (792)
T KOG1963|consen 301 SPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTI 380 (792)
T ss_pred cCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEecccccee
Confidence 789999999999999999987655443333322111 12234567888884 44444678888888887553211
Q ss_pred ceeeeee-------------------------------------------------------------ecccccccccee
Q 022019 208 FEKYSTL-------------------------------------------------------------KGNKEGQAGIMS 226 (304)
Q Consensus 208 ~~~~~~~-------------------------------------------------------------~~~~~~~~~~v~ 226 (304)
. .+... ......|...+.
T Consensus 381 ~-~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~v 459 (792)
T KOG1963|consen 381 Y-KLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFV 459 (792)
T ss_pred e-eEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeE
Confidence 0 00000 001133444444
Q ss_pred EEEeecCCCc-EEEEEecCCeEEEEecCCc----------eEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEec
Q 022019 227 AIAFSPTHTG-MLAIGSYSQTSAIYREDNM----------ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 227 ~~~~~p~~~~-~l~~~~~dg~i~i~d~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
..++.+.... .+++++.||.++||-+... .+...-.-|..++++++|+.||..|+. + .|++|.+||.
T Consensus 460 at~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGslla~-s-~~~~Itiwd~ 537 (792)
T KOG1963|consen 460 ATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSLLAV-S-FDDTITIWDY 537 (792)
T ss_pred EEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCCcEEEE-e-cCCEEEEecC
Confidence 4444432343 8899999999999987322 222222247889999999999976655 4 6999999999
Q ss_pred ccc
Q 022019 296 RKA 298 (304)
Q Consensus 296 ~~~ 298 (304)
.+.
T Consensus 538 ~~~ 540 (792)
T KOG1963|consen 538 DTK 540 (792)
T ss_pred CCh
Confidence 884
No 210
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.67 E-value=5.1e-15 Score=118.11 Aligned_cols=165 Identities=21% Similarity=0.284 Sum_probs=119.0
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCcc-----
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRD----- 207 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~----- 207 (304)
.+.+--++.|-..|.|.+.|....+....+.... ......|+++.|-|.+..++ ++ .+|.+++||.......
T Consensus 182 ~~~g~dllIGf~tGqvq~idp~~~~~sklfne~r-~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~ 260 (636)
T KOG2394|consen 182 TPKGLDLLIGFTTGQVQLIDPINFEVSKLFNEER-LINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSY 260 (636)
T ss_pred CCCCcceEEeeccCceEEecchhhHHHHhhhhcc-cccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcc
Confidence 4566678888889999999876533222222211 12234899999999554433 44 9999999987432110
Q ss_pred --------ceeeee-------eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEE
Q 022019 208 --------FEKYST-------LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQ 272 (304)
Q Consensus 208 --------~~~~~~-------~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~ 272 (304)
+..... ......--.+.|..++|+| ++.+||+.+.||.++|||..+.+++..++..-+...|++
T Consensus 261 ~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~-DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvc 339 (636)
T KOG2394|consen 261 QALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSP-DGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVC 339 (636)
T ss_pred cccCCCCeeEEeeeeccccCCccceeEeccccccceeEcC-CCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEE
Confidence 000000 0000111234688999999 888999999999999999999998888887788999999
Q ss_pred ECCCCcEEEEeeccCCeEEEEecccceeee
Q 022019 273 FSRDGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 273 ~~~~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
|||||+||++|| .|.-|.||.+...+.+.
T Consensus 340 WSPDGKyIvtGG-EDDLVtVwSf~erRVVA 368 (636)
T KOG2394|consen 340 WSPDGKYIVTGG-EDDLVTVWSFEERRVVA 368 (636)
T ss_pred EcCCccEEEecC-CcceEEEEEeccceEEE
Confidence 999999999999 99999999998886653
No 211
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.66 E-value=1.4e-14 Score=111.59 Aligned_cols=209 Identities=17% Similarity=0.209 Sum_probs=145.6
Q ss_pred cCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecC---CeEEEEeecCccce
Q 022019 57 SIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEG---ESVYDFCWFPHMSA 133 (304)
Q Consensus 57 ~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~ 133 (304)
..|...|.|++|....+++.+|+.+++|.+.|+.+.+.. ....+. ..|+.+..
T Consensus 102 ~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi------------------~V~~~~~~~~~VY~m~~------ 157 (609)
T KOG4227|consen 102 HPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSI------------------YVANENNNRGDVYHMDQ------ 157 (609)
T ss_pred CccccceEEEEEccCCeeEecCCCcceeEeeecccceee------------------eeecccCcccceeeccc------
Confidence 467799999999999999999999999999999865432 222222 36777766
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceee
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
+|..+.|++.+.+|.|.+||.+.......+.... .......++.|+|....|+ +. ..+.+.+||++....+....
T Consensus 158 -~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~A--N~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~ 234 (609)
T KOG4227|consen 158 -HPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPA--NSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQR 234 (609)
T ss_pred -CCCCceEEEEecCceEEEEeccCCCCCCceeeec--CCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhh
Confidence 5567789999999999999998654222221111 1223778999999765544 54 77889999998754321110
Q ss_pred eeee------------------------------------------cccc----c--cccceeEEEeecCCCcEEEEEec
Q 022019 212 STLK------------------------------------------GNKE----G--QAGIMSAIAFSPTHTGMLAIGSY 243 (304)
Q Consensus 212 ~~~~------------------------------------------~~~~----~--~~~~v~~~~~~p~~~~~l~~~~~ 243 (304)
.... .... + ....+.+++|-. ..-+++|+.
T Consensus 235 ~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~--D~~v~tGSD 312 (609)
T KOG4227|consen 235 SMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFID--DYTVATGSD 312 (609)
T ss_pred hccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCCcceeeeeeeeeeeec--ceeeeccCc
Confidence 0000 0000 0 011255666664 335899999
Q ss_pred CCeEEEEecCCc-----------------------eEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEec
Q 022019 244 SQTSAIYREDNM-----------------------ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 244 dg~i~i~d~~~~-----------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
+-.|++|.+... +.+..+++|..-+..+.|+|...+|++.| -.+.+++|.-
T Consensus 313 ~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSG-VE~~~KlWS~ 386 (609)
T KOG4227|consen 313 HWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSG-VENSFKLWSD 386 (609)
T ss_pred ccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecCCcceEeccc-hhhheecccc
Confidence 999999986411 23456789999999999999999999988 8999999964
No 212
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.65 E-value=4.4e-14 Score=117.73 Aligned_cols=200 Identities=15% Similarity=0.172 Sum_probs=121.0
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCC---CeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSED---KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~d---g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
.+..+...+.+.+|+|||+.|+..+.+ ..|.+||+.++.... + ...........
T Consensus 190 ~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-----------------l-~~~~g~~~~~~----- 246 (427)
T PRK02889 190 SALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-----------------V-ANFKGSNSAPA----- 246 (427)
T ss_pred EeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-----------------e-ecCCCCccceE-----
Confidence 344677889999999999998877643 459999997653210 0 01112223344
Q ss_pred ceeCCCccEEE-EEeCCCCEEEEE--cCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCc
Q 022019 132 SASDPTSCVFA-STTRDHPIHLWD--ATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGR 206 (304)
Q Consensus 132 ~~~~~~~~~l~-~~~~dg~i~i~d--~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~ 206 (304)
|+|||+.|+ +.+.+|...||. +..+.. ..+..+.. ......|+|||+.|+ ++ .++...+|.+...+.
T Consensus 247 --~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~-----~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g 318 (427)
T PRK02889 247 --WSPDGRTLAVALSRDGNSQIYTVNADGSGL-RRLTQSSG-----IDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGG 318 (427)
T ss_pred --ECCCCCEEEEEEccCCCceEEEEECCCCCc-EECCCCCC-----CCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCC
Confidence 488998776 456777766654 444442 33332221 345678999999888 55 456667776643222
Q ss_pred cceeeeeeeccccccccceeEEEeecCCCcEEEEEecCC---eEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEe
Q 022019 207 DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ---TSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTG 283 (304)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 283 (304)
....+ .. .+ .......|+| +++.|+..+.++ .|.+||+.+++.. .+.. ........|+|||++|+.+
T Consensus 319 ~~~~l---t~--~g--~~~~~~~~Sp-DG~~Ia~~s~~~g~~~I~v~d~~~g~~~-~lt~-~~~~~~p~~spdg~~l~~~ 388 (427)
T PRK02889 319 AAQRV---TF--TG--SYNTSPRISP-DGKLLAYISRVGGAFKLYVQDLATGQVT-ALTD-TTRDESPSFAPNGRYILYA 388 (427)
T ss_pred ceEEE---ec--CC--CCcCceEECC-CCCEEEEEEccCCcEEEEEEECCCCCeE-EccC-CCCccCceECCCCCEEEEE
Confidence 21111 11 11 2234578999 555666555443 5999999877644 3332 2334678999999999888
Q ss_pred eccCCe--EEEEec
Q 022019 284 GRKDPY--ILCWDL 295 (304)
Q Consensus 284 ~~~d~~--i~vwd~ 295 (304)
+...|. +.+.++
T Consensus 389 ~~~~g~~~l~~~~~ 402 (427)
T PRK02889 389 TQQGGRSVLAAVSS 402 (427)
T ss_pred EecCCCEEEEEEEC
Confidence 733333 555555
No 213
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.65 E-value=4.8e-14 Score=118.64 Aligned_cols=236 Identities=14% Similarity=0.100 Sum_probs=155.7
Q ss_pred eeecCCCCceeEEEEcCCC---CeEEEecCCCeEEEeeCCCCCCcccccccc------cccc-CCccceE---------E
Q 022019 54 RTSSIPNNFLKGIKWSPDG---SSFLTSSEDKTLRIFSLPENGISYDVNACS------LAKD-QDSYEAS---------L 114 (304)
Q Consensus 54 ~~~~~h~~~V~~i~~s~~~---~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~------~~~~-~~~~~~~---------~ 114 (304)
+.+.+|..+++.+.+.|.. .++.+++.||.|++||..++.+...+.... .... -+..... +
T Consensus 51 ~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~ 130 (792)
T KOG1963|consen 51 TSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNNLPVHALVYKPAQADISANVYVSVEDYSIL 130 (792)
T ss_pred hhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecCCceeEEEechhHhCccceeEeecccceee
Confidence 3788999999999999844 478899999999999998876533221110 0000 0000000 0
Q ss_pred E---ee---------------cCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccce
Q 022019 115 V---VT---------------EGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAA 176 (304)
Q Consensus 115 ~---~~---------------~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v 176 (304)
. .. ....+....-.|..+..++.|......- +..+++|+..++. ...........|...+
T Consensus 131 ~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~i~~-~~~~~~~~v~~~~-~~~~~~~~~~~Htf~~ 208 (792)
T KOG1963|consen 131 TTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKGIVH-MCKIHIYFVPKHT-KHTSSRDITVHHTFNI 208 (792)
T ss_pred eecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEEEEE-eeeEEEEEecccc-eeeccchhhhhhcccc
Confidence 0 00 0000000000134455566666555554 4568899887755 2222222233444468
Q ss_pred EEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc
Q 022019 177 FSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255 (304)
Q Consensus 177 ~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~ 255 (304)
++.+++|.++++++| .||.|.+|.--..+........+ .-|...|.+++|++ +|.+|++|+..|.+-+|.+.++
T Consensus 209 t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~l----HWH~~~V~~L~fS~-~G~~LlSGG~E~VLv~Wq~~T~ 283 (792)
T KOG1963|consen 209 TCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLL----HWHHDEVNSLSFSS-DGAYLLSGGREGVLVLWQLETG 283 (792)
T ss_pred eeEEeccccceEEEeccCCcEEEEeccccccccccceEE----EecccccceeEEec-CCceEeecccceEEEEEeecCC
Confidence 999999999999988 99999999654311111111111 34667899999999 7779999999999999999998
Q ss_pred eEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 256 ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 256 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
+ .+-++.-.++|..+.++||+.+.+... .|+.|.+....+.
T Consensus 284 ~-kqfLPRLgs~I~~i~vS~ds~~~sl~~-~DNqI~li~~~dl 324 (792)
T KOG1963|consen 284 K-KQFLPRLGSPILHIVVSPDSDLYSLVL-EDNQIHLIKASDL 324 (792)
T ss_pred C-cccccccCCeeEEEEEcCCCCeEEEEe-cCceEEEEeccch
Confidence 8 444566778999999999999999888 8999999877543
No 214
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.64 E-value=1.2e-13 Score=105.38 Aligned_cols=210 Identities=18% Similarity=0.191 Sum_probs=133.1
Q ss_pred CCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 60 NNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 60 ~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
...|+|++|-| .++-|+.|+.. -|.+|..+.......... .........+......+|+++.| ++||
T Consensus 140 QrnvtclawRPlsaselavgCr~-gIciW~~s~tln~~r~~~----~~s~~~~qvl~~pgh~pVtsmqw-------n~dg 207 (445)
T KOG2139|consen 140 QRNVTCLAWRPLSASELAVGCRA-GICIWSDSRTLNANRNIR----MMSTHHLQVLQDPGHNPVTSMQW-------NEDG 207 (445)
T ss_pred hcceeEEEeccCCcceeeeeecc-eeEEEEcCcccccccccc----cccccchhheeCCCCceeeEEEE-------cCCC
Confidence 45799999999 55678888765 589998763321111000 00111111223333468999999 6688
Q ss_pred cEEEEEeC-CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeec
Q 022019 139 CVFASTTR-DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKG 216 (304)
Q Consensus 139 ~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~ 216 (304)
..+++++. |..|.|||..++........... .+.-+.|+||+.+|+++ -|+..++|..... .....
T Consensus 208 t~l~tAS~gsssi~iWdpdtg~~~pL~~~glg-----g~slLkwSPdgd~lfaAt~davfrlw~e~q~-------wt~er 275 (445)
T KOG2139|consen 208 TILVTASFGSSSIMIWDPDTGQKIPLIPKGLG-----GFSLLKWSPDGDVLFAATCDAVFRLWQENQS-------WTKER 275 (445)
T ss_pred CEEeecccCcceEEEEcCCCCCcccccccCCC-----ceeeEEEcCCCCEEEEecccceeeeehhccc-------ceecc
Confidence 88998875 67899999999887655432222 77889999999999865 9999999965431 11110
Q ss_pred cccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC--c-------------eEeEEec-----c----ccCCeEEEE
Q 022019 217 NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN--M-------------ELLYVLH-----G----QEGGVTHVQ 272 (304)
Q Consensus 217 ~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~--~-------------~~~~~~~-----~----~~~~v~~~~ 272 (304)
. .-..+.|...+|+|.+..+|++++..-. +|.+.. . .++..+. . ..+++.+++
T Consensus 276 w-~lgsgrvqtacWspcGsfLLf~~sgsp~--lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~la 352 (445)
T KOG2139|consen 276 W-ILGSGRVQTACWSPCGSFLLFACSGSPR--LYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLA 352 (445)
T ss_pred e-eccCCceeeeeecCCCCEEEEEEcCCce--EEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceee
Confidence 0 1123479999999977767777665443 443321 0 1111121 1 145789999
Q ss_pred ECCCCcEEEEeeccCC--------eEEEEeccc
Q 022019 273 FSRDGNYLYTGGRKDP--------YILCWDLRK 297 (304)
Q Consensus 273 ~~~~~~~l~~~~~~d~--------~i~vwd~~~ 297 (304)
|.|.|.+|++.- +.+ .|.+||.+.
T Consensus 353 wDpsGeyLav~f-Kg~~~v~~~k~~i~~fdtr~ 384 (445)
T KOG2139|consen 353 WDPSGEYLAVIF-KGQSFVLLCKLHISRFDTRK 384 (445)
T ss_pred ECCCCCEEEEEE-cCCchhhhhhhhhhhhcccc
Confidence 999999999876 433 356666654
No 215
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.64 E-value=1e-13 Score=102.26 Aligned_cols=156 Identities=21% Similarity=0.399 Sum_probs=102.2
Q ss_pred eEEEEcCCCCeEEEecC----------CCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 64 KGIKWSPDGSSFLTSSE----------DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 64 ~~i~~s~~~~~l~s~~~----------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
..+.|+|+|++|+.-.. -|...+|-++.. ......+......+|.+++|
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~---------------~~~~~~i~l~~~~~I~~~~W------ 67 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEK---------------NIPVESIELKKEGPIHDVAW------ 67 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecC---------------CCccceeeccCCCceEEEEE------
Confidence 46889999997765332 123455554322 12223344444567999999
Q ss_pred eCCCccEEEEE--eCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-Ec---CCeEEEEEcCCCCcc
Q 022019 134 SDPTSCVFAST--TRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GY---NKSVRVFDVHRPGRD 207 (304)
Q Consensus 134 ~~~~~~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~---d~~i~v~d~~~~~~~ 207 (304)
+|+|+.|++. ..++.|.+||++ ++.+..+. .. .+..+.|+|+|+++++ |. .|.|.+||++..
T Consensus 68 -sP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~-----~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~--- 135 (194)
T PF08662_consen 68 -SPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQ-----PRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKK--- 135 (194)
T ss_pred -CcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CC-----CceEEEECCCCCEEEEEEccCCCcEEEEEECCCC---
Confidence 6788776555 356799999996 54444443 22 6678999999999994 42 477999999852
Q ss_pred ceeeeeeeccccccccceeEEEeecCCCcEEEEEec------CCeEEEEecCCceEeEEe
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY------SQTSAIYREDNMELLYVL 261 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~ 261 (304)
+.+.. ..| ..++.++|+| +++++++++. |+.++||+. .|+.+...
T Consensus 136 -~~i~~-----~~~-~~~t~~~WsP-dGr~~~ta~t~~r~~~dng~~Iw~~-~G~~l~~~ 186 (194)
T PF08662_consen 136 -KKIST-----FEH-SDATDVEWSP-DGRYLATATTSPRLRVDNGFKIWSF-QGRLLYKK 186 (194)
T ss_pred -EEeec-----ccc-CcEEEEEEcC-CCCEEEEEEeccceeccccEEEEEe-cCeEeEec
Confidence 11111 112 2378999999 6667777664 788999998 46655544
No 216
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.63 E-value=6.7e-13 Score=107.58 Aligned_cols=226 Identities=18% Similarity=0.220 Sum_probs=139.2
Q ss_pred CCceeEEEEcCCCCeEEEecC-CCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 60 NNFLKGIKWSPDGSSFLTSSE-DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~-dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
......++++|++++|+++.. +|+|.++++.............. .......+.....-+|+.+.++|++
T Consensus 86 g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~----------~~g~g~~~~rq~~~h~H~v~~~pdg 155 (345)
T PF10282_consen 86 GSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVR----------HEGSGPNPDRQEGPHPHQVVFSPDG 155 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEE----------SEEEESSTTTTSSTCEEEEEE-TTS
T ss_pred CCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecc----------cCCCCCcccccccccceeEEECCCC
Confidence 345567999999999998875 89999999986422111100000 0000000000112234455669999
Q ss_pred cEEEEEeC-CCCEEEEEcCCCe--eeE--EeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceee
Q 022019 139 CVFASTTR-DHPIHLWDATTGL--LRC--TYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 139 ~~l~~~~~-dg~i~i~d~~~~~--~~~--~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
+++++... ...|++|++.... ... .+... .......+.|+|++++++ +. .++.|.+|++......+...
T Consensus 156 ~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~----~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~ 231 (345)
T PF10282_consen 156 RFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVP----PGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEI 231 (345)
T ss_dssp SEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECS----TTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEE
T ss_pred CEEEEEecCCCEEEEEEEeCCCceEEEeeccccc----cCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEE
Confidence 98887643 3469999997654 322 22222 223678999999999998 45 88999999998433344444
Q ss_pred eeeecccccc--ccceeEEEeecCCCcEEEEEecCCeEEEEecCC--c--eEeEEeccccCCeEEEEECCCCcEEEEeec
Q 022019 212 STLKGNKEGQ--AGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN--M--ELLYVLHGQEGGVTHVQFSRDGNYLYTGGR 285 (304)
Q Consensus 212 ~~~~~~~~~~--~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~--~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 285 (304)
........+. ......++++|++..++++...++.|.+|++.. + +.+..+.......+.+.++|+|++|++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~ 311 (345)
T PF10282_consen 232 QTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQ 311 (345)
T ss_dssp EEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEET
T ss_pred EEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEec
Confidence 4333221111 124778999995554555555678899999932 2 445555544455799999999999999987
Q ss_pred cCCeEEEEecc--cce
Q 022019 286 KDPYILCWDLR--KAV 299 (304)
Q Consensus 286 ~d~~i~vwd~~--~~~ 299 (304)
.++.|.+|++. +|+
T Consensus 312 ~s~~v~vf~~d~~tG~ 327 (345)
T PF10282_consen 312 DSNTVSVFDIDPDTGK 327 (345)
T ss_dssp TTTEEEEEEEETTTTE
T ss_pred CCCeEEEEEEeCCCCc
Confidence 88899999874 453
No 217
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.63 E-value=1.6e-15 Score=126.86 Aligned_cols=210 Identities=16% Similarity=0.209 Sum_probs=148.9
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
++...||.+.|+.++.+.+..++++++.|..|++|.+.++... .+..+|.+.|++++|.|.
T Consensus 225 lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pv-----------------svLrghtgavtaiafsP~-- 285 (1113)
T KOG0644|consen 225 LASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPV-----------------SVLRGHTGAVTAIAFSPR-- 285 (1113)
T ss_pred hccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchH-----------------HHHhccccceeeeccCcc--
Confidence 3478899999999999999999999999999999999865432 255667799999999663
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCc--------------------------
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT-------------------------- 186 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-------------------------- 186 (304)
.+.+.||++++||.+- ......+-+.......-+.++.|...+.
T Consensus 286 ---------~sss~dgt~~~wd~r~-~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~l 355 (1113)
T KOG0644|consen 286 ---------ASSSDDGTCRIWDARL-EPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLL 355 (1113)
T ss_pred ---------ccCCCCCceEeccccc-cccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhHhhhhccce
Confidence 3678899999999871 1110000000000001122222222111
Q ss_pred EEE-----------EE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC
Q 022019 187 KIF-----------AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN 254 (304)
Q Consensus 187 ~l~-----------~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~ 254 (304)
.++ ++ .+..+.+|++.. ..+.....+|...+..+.++|-+..+..+++.||...|||+-.
T Consensus 356 if~t~ssd~~~~~~~ar~~~~~~vwnl~~--------g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~e 427 (1113)
T KOG0644|consen 356 IFVTRSSDLSSIVVTARNDHRLCVWNLYT--------GQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWE 427 (1113)
T ss_pred EEEeccccccccceeeeeeeEeeeeeccc--------chhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeeccc
Confidence 111 22 344566666654 2333445778888999999998888899999999999999999
Q ss_pred ceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 255 MELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 255 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
+.+++.+......+....||+||..++... .-|.+.+.....++.
T Consensus 428 g~pik~y~~gh~kl~d~kFSqdgts~~lsd-~hgql~i~g~gqs~s 472 (1113)
T KOG0644|consen 428 GIPIKHYFIGHGKLVDGKFSQDGTSIALSD-DHGQLYILGTGQSKS 472 (1113)
T ss_pred CCcceeeecccceeeccccCCCCceEecCC-CCCceEEeccCCCcc
Confidence 988877764456788899999999999888 889999988766544
No 218
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.63 E-value=5.8e-15 Score=118.31 Aligned_cols=223 Identities=13% Similarity=0.172 Sum_probs=147.4
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
++..|.+.|+.+.|.|-...|++|+.||++++|++...... ..........+..|..+|.+++.
T Consensus 289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s---------~~~~~epi~tfraH~gPVl~v~v------- 352 (577)
T KOG0642|consen 289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKS---------AEKDVEPILTFRAHEGPVLCVVV------- 352 (577)
T ss_pred eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCc---------cccceeeeEEEecccCceEEEEe-------
Confidence 77889999999999998899999999999999999431100 01111222245668889999987
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCC------eeeEEeecccccccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCCcc
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTG------LLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRD 207 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~------~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~~~ 207 (304)
.+++..+++|+-||+|+.|++... .....+..+ -.+|...|+.+++++....|+ ++.||++++|+......
T Consensus 353 ~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~-l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~- 430 (577)
T KOG0642|consen 353 PSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGT-LLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP- 430 (577)
T ss_pred cCCceEEEeeccCceeeeeccCCCCCcccccCcchhccc-eeccccceeeeeecccccceeeecCCceEEeeccCCcCc-
Confidence 779999999999999999976521 111111111 124555999999999888888 56999999999865321
Q ss_pred ceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccc-------cCCeEEEEECCCCcEE
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ-------EGGVTHVQFSRDGNYL 280 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l 280 (304)
..+. .....+...++++-.....+.++...-+.--+++......+..+... ...+..+.++|.+.+.
T Consensus 431 ----~~f~--~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~ 504 (577)
T KOG0642|consen 431 ----CTFG--EPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADIT 504 (577)
T ss_pred ----cccC--CccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCee
Confidence 1111 11122334566665422223333333333334444444433333211 1347789999999999
Q ss_pred EEeeccCCeEEEEecccceeee
Q 022019 281 YTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 281 ~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
+++. .|+.|+++|..+++.+.
T Consensus 505 ~~~h-ed~~Ir~~dn~~~~~l~ 525 (577)
T KOG0642|consen 505 FTAH-EDRSIRFFDNKTGKILH 525 (577)
T ss_pred Eecc-cCCceecccccccccch
Confidence 9999 99999999999987653
No 219
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.63 E-value=4.2e-14 Score=117.96 Aligned_cols=177 Identities=18% Similarity=0.242 Sum_probs=111.8
Q ss_pred CCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCC---CCEEEEEcCC
Q 022019 81 DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRD---HPIHLWDATT 157 (304)
Q Consensus 81 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~ 157 (304)
+..|.+||.+.... .....+...+....| +|+|+.|+.++.+ ..|++||+.+
T Consensus 183 ~~~i~i~d~dg~~~------------------~~lt~~~~~v~~p~w-------SPDG~~la~~s~~~~~~~i~i~dl~t 237 (429)
T PRK01742 183 PYEVRVADYDGFNQ------------------FIVNRSSQPLMSPAW-------SPDGSKLAYVSFENKKSQLVVHDLRS 237 (429)
T ss_pred eEEEEEECCCCCCc------------------eEeccCCCccccceE-------cCCCCEEEEEEecCCCcEEEEEeCCC
Confidence 46899998763321 122334456777777 8899999888654 3699999988
Q ss_pred CeeeEEeecccccccccceEEEEECCCCcEEEE-E-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCC
Q 022019 158 GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-G-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHT 235 (304)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 235 (304)
++......... ....++|+|||+.|+. + .+|.+.||.+....... ..+ ..+...+....|+|++.
T Consensus 238 g~~~~l~~~~g------~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~---~~l----t~~~~~~~~~~wSpDG~ 304 (429)
T PRK01742 238 GARKVVASFRG------HNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTP---SQL----TSGAGNNTEPSWSPDGQ 304 (429)
T ss_pred CceEEEecCCC------ccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCe---Eee----ccCCCCcCCEEECCCCC
Confidence 76433222111 2346899999998884 4 67776665443222211 111 23344577899999554
Q ss_pred cEEEEEecCCeEEEEecCCc-eEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 236 GMLAIGSYSQTSAIYREDNM-ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 236 ~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
.+++++..+|...||++... .....+ .+.. ..+.|+|||++|+.++ .++ +.+||+.+++.
T Consensus 305 ~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG~~ia~~~-~~~-i~~~Dl~~g~~ 365 (429)
T PRK01742 305 SILFTSDRSGSPQVYRMSASGGGASLV-GGRG--YSAQISADGKTLVMIN-GDN-VVKQDLTSGST 365 (429)
T ss_pred EEEEEECCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCCCCEEEEEc-CCC-EEEEECCCCCe
Confidence 45555556788888876432 222223 3333 4678999999999888 655 56699988753
No 220
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.63 E-value=6.8e-15 Score=113.97 Aligned_cols=159 Identities=19% Similarity=0.208 Sum_probs=111.9
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCCcccee
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~ 210 (304)
++++++|..+++++.||++++|++.+.........+.. .|.++.|+|||++|+ .|.| ..+||+.+++ ..+..
T Consensus 150 vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~-----eV~DL~FS~dgk~lasig~d-~~~VW~~~~g-~~~a~ 222 (398)
T KOG0771|consen 150 VAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHA-----EVKDLDFSPDGKFLASIGAD-SARVWSVNTG-AALAR 222 (398)
T ss_pred EEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcC-----ccccceeCCCCcEEEEecCC-ceEEEEeccC-chhhh
Confidence 56688999999999999999999876655544444443 899999999999999 5777 9999999875 11111
Q ss_pred eeeeeccccccccceeEEEeecCC---CcEEEE-EecCCeEEEEecCCceE-----eEEeccccCCeEEEEECCCCcEEE
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTH---TGMLAI-GSYSQTSAIYREDNMEL-----LYVLHGQEGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~---~~~l~~-~~~dg~i~i~d~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~ 281 (304)
... ......+..+.|+.++ ..++++ -..-+.|+.||+..... ..+...-...|++++.+++|++++
T Consensus 223 ~t~-----~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~A 297 (398)
T KOG0771|consen 223 KTP-----FSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLA 297 (398)
T ss_pred cCC-----cccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEE
Confidence 110 2233346678888743 223333 33345677777654322 111112234799999999999999
Q ss_pred EeeccCCeEEEEecccceeeee
Q 022019 282 TGGRKDPYILCWDLRKAVQVVY 303 (304)
Q Consensus 282 ~~~~~d~~i~vwd~~~~~~~~~ 303 (304)
.|+ .||.|.+++..+.+.+.+
T Consensus 298 lGT-~dGsVai~~~~~lq~~~~ 318 (398)
T KOG0771|consen 298 LGT-MDGSVAIYDAKSLQRLQY 318 (398)
T ss_pred Eec-cCCcEEEEEeceeeeeEe
Confidence 999 999999999988876643
No 221
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.62 E-value=6.3e-14 Score=113.13 Aligned_cols=200 Identities=16% Similarity=0.222 Sum_probs=146.4
Q ss_pred CCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeec------Cc-------cceeCC
Q 022019 70 PDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWF------PH-------MSASDP 136 (304)
Q Consensus 70 ~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~-------~~~~~~ 136 (304)
|.+.|+|....||.+++|+...++...++....... +...+..|. |. ....+.
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s--------------~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~ 68 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLS--------------GTCTYTKWGLSADYSPMKWLSLEKAKKASL 68 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccchhcc--------------CcceeEEEEEEeccchHHHHhHHHHhhccC
Confidence 456799999999999999998876644433322111 122222221 10 011134
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcCCeEEEEEcCCCCccceeeeeee
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLK 215 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~~i~v~d~~~~~~~~~~~~~~~ 215 (304)
+...++-|...|.|.+|++..++....+... .|...|.++.++.+-..|.+ |.|..+..|+.... ...
T Consensus 69 ~t~~lvlgt~~g~v~~ys~~~g~it~~~st~---~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~--------~~~ 137 (541)
T KOG4547|consen 69 DTSMLVLGTPQGSVLLYSVAGGEITAKLSTD---KHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEK--------VII 137 (541)
T ss_pred CceEEEeecCCccEEEEEecCCeEEEEEecC---CCCCcceeeecccccCceEecCCceeEEEEecccc--------eee
Confidence 5567888999999999999999988777643 23448999999988888884 59999999998762 111
Q ss_pred ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCC-----CcEEEEeeccCCeE
Q 022019 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRD-----GNYLYTGGRKDPYI 290 (304)
Q Consensus 216 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~~~~d~~i 290 (304)
.........+.+++.+| ++..+++++ +.|++||+++.+.+.+|.+|.++|.++.|..+ |.+++++...+.-+
T Consensus 138 ~~~~~~~~~~~sl~is~-D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i 214 (541)
T KOG4547|consen 138 RIWKEQKPLVSSLCISP-DGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGI 214 (541)
T ss_pred eeeccCCCccceEEEcC-CCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccce
Confidence 12234455588999999 577888887 78999999999999999999999999999876 77777665467778
Q ss_pred EEEeccc
Q 022019 291 LCWDLRK 297 (304)
Q Consensus 291 ~vwd~~~ 297 (304)
.+|-++.
T Consensus 215 ~~w~v~~ 221 (541)
T KOG4547|consen 215 TVWVVEK 221 (541)
T ss_pred eEEEEEc
Confidence 8887765
No 222
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.61 E-value=1.2e-15 Score=119.54 Aligned_cols=188 Identities=14% Similarity=0.183 Sum_probs=138.9
Q ss_pred ceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEE
Q 022019 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF 141 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 141 (304)
.|.++.|-.+.++||++- ..-+.|||-...++ ..+.....|..+.|.|. .-+|
T Consensus 172 tv~Dv~~LHneq~~AVAQ-K~y~yvYD~~GtEl-------------------HClk~~~~v~rLeFLPy-------HfLL 224 (545)
T KOG1272|consen 172 TVRDVTFLHNEQFFAVAQ-KKYVYVYDNNGTEL-------------------HCLKRHIRVARLEFLPY-------HFLL 224 (545)
T ss_pred hhhhhhhhcchHHHHhhh-hceEEEecCCCcEE-------------------eehhhcCchhhhcccch-------hhee
Confidence 345555555556666554 34678887542221 11222356667777554 3479
Q ss_pred EEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccc
Q 022019 142 ASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEG 220 (304)
Q Consensus 142 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~ 220 (304)
++++..|.++.-|+.+|+.+..+..... .+..+.-+|-+..+-.| ..|+|.+|...... ..-....
T Consensus 225 ~~~~~~G~L~Y~DVS~GklVa~~~t~~G-----~~~vm~qNP~NaVih~GhsnGtVSlWSP~ske--------PLvKiLc 291 (545)
T KOG1272|consen 225 VAASEAGFLKYQDVSTGKLVASIRTGAG-----RTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKE--------PLVKILC 291 (545)
T ss_pred eecccCCceEEEeechhhhhHHHHccCC-----ccchhhcCCccceEEEcCCCceEEecCCCCcc--------hHHHHHh
Confidence 9999999999999999999888776554 77789999988888887 99999999987632 2222356
Q ss_pred cccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 221 QAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 221 ~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
|.++|.++++.| +|.+++|.+.|..++|||++....+.++.. ..+...+++|..| +++.+ ....+.+|.
T Consensus 292 H~g~V~siAv~~-~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~Sqkg--lLA~~-~G~~v~iw~ 360 (545)
T KOG1272|consen 292 HRGPVSSIAVDR-GGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQKG--LLALS-YGDHVQIWK 360 (545)
T ss_pred cCCCcceEEECC-CCcEEeecccccceeEeeeccccccceeec-CCCcccccccccc--ceeee-cCCeeeeeh
Confidence 889999999999 899999999999999999999887777765 5567889998766 33344 566789994
No 223
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.60 E-value=2.5e-14 Score=112.90 Aligned_cols=249 Identities=13% Similarity=0.175 Sum_probs=153.0
Q ss_pred ccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccc--------cccc----------cCCcc
Q 022019 49 FYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNAC--------SLAK----------DQDSY 110 (304)
Q Consensus 49 ~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~--------~~~~----------~~~~~ 110 (304)
.+.....+.+|.+.|..+.|+..|..|++|+.|..|.+||+........+... .+.+ ..++.
T Consensus 131 r~~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgq 210 (559)
T KOG1334|consen 131 RLRLQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQ 210 (559)
T ss_pred HhhhhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCc
Confidence 34555678999999999999999999999999999999998765432111100 0000 00000
Q ss_pred c-------------eEEEeecCCeEEEEeecCcc------------------------------------------ceeC
Q 022019 111 E-------------ASLVVTEGESVYDFCWFPHM------------------------------------------SASD 135 (304)
Q Consensus 111 ~-------------~~~~~~~~~~v~~~~~~~~~------------------------------------------~~~~ 135 (304)
+ ......|..+|..++..|.. ++.+
T Consensus 211 vr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~ 290 (559)
T KOG1334|consen 211 VRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVD 290 (559)
T ss_pred eeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecC
Confidence 0 11223344445554443321 1112
Q ss_pred CCc-cEEEEEeCCCCEEEEEcCCCeee------EEeec-ccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCc
Q 022019 136 PTS-CVFASTTRDHPIHLWDATTGLLR------CTYRA-YDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGR 206 (304)
Q Consensus 136 ~~~-~~l~~~~~dg~i~i~d~~~~~~~------~~~~~-~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~ 206 (304)
|-. ..+++++.|-.+++||.+.-... ..+.. +........|++++|+.++.-+.++ .|-.|++|.-..+..
T Consensus 291 P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G 370 (559)
T KOG1334|consen 291 PRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDG 370 (559)
T ss_pred CCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccC
Confidence 211 23445555555555554321110 11110 1111223468899999877666655 889999995443221
Q ss_pred --c--ceee-eeeecccccccc--ceeEEEe-ecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCc
Q 022019 207 --D--FEKY-STLKGNKEGQAG--IMSAIAF-SPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN 278 (304)
Q Consensus 207 --~--~~~~-~~~~~~~~~~~~--~v~~~~~-~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 278 (304)
+ .... .......++|.. .|..+-| -| ...++++|+.-|.|.||+-.+++.+..+.+-..-|+|+.-+|--.
T Consensus 371 ~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGP-rsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~P 449 (559)
T KOG1334|consen 371 SEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGP-RSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLP 449 (559)
T ss_pred CCCCCCcchhhccchhhcccccccccceeeeccC-ccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCc
Confidence 0 0000 111111344433 3666665 46 678999999999999999999999988888777999999999999
Q ss_pred EEEEeeccCCeEEEEecccce
Q 022019 279 YLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 279 ~l~~~~~~d~~i~vwd~~~~~ 299 (304)
.||++| -|.-|+||-..+.+
T Consensus 450 vLAsSG-id~DVKIWTP~~~e 469 (559)
T KOG1334|consen 450 VLASSG-IDHDVKIWTPLTAE 469 (559)
T ss_pred hhhccC-CccceeeecCCccc
Confidence 999999 99999999875443
No 224
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.60 E-value=2.5e-12 Score=104.20 Aligned_cols=195 Identities=15% Similarity=0.159 Sum_probs=125.8
Q ss_pred EEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEE
Q 022019 75 FLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWD 154 (304)
Q Consensus 75 l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d 154 (304)
+++-..+|.|.+.|..+.+....+. .+..+.. ...++|||+++++++.||.|.++|
T Consensus 9 ~V~~~~~~~v~viD~~t~~~~~~i~------------------~~~~~h~------~~~~s~Dgr~~yv~~rdg~vsviD 64 (369)
T PF02239_consen 9 YVVERGSGSVAVIDGATNKVVARIP------------------TGGAPHA------GLKFSPDGRYLYVANRDGTVSVID 64 (369)
T ss_dssp EEEEGGGTEEEEEETTT-SEEEEEE-------------------STTEEE------EEE-TT-SSEEEEEETTSEEEEEE
T ss_pred EEEecCCCEEEEEECCCCeEEEEEc------------------CCCCcee------EEEecCCCCEEEEEcCCCeEEEEE
Confidence 3455678999999988654432211 1122211 123488999999999999999999
Q ss_pred cCCCeeeEEeecccccccccceEEEEECCCCcEEEEE--cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeec
Q 022019 155 ATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG--YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSP 232 (304)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 232 (304)
+.+++.+.++.... ...++++++||++++++ ..+.+.++|.++. +..+.+.............+.++..+|
T Consensus 65 ~~~~~~v~~i~~G~------~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tl-e~v~~I~~~~~~~~~~~~Rv~aIv~s~ 137 (369)
T PF02239_consen 65 LATGKVVATIKVGG------NPRGIAVSPDGKYVYVANYEPGTVSVIDAETL-EPVKTIPTGGMPVDGPESRVAAIVASP 137 (369)
T ss_dssp TTSSSEEEEEE-SS------EEEEEEE--TTTEEEEEEEETTEEEEEETTT---EEEEEE--EE-TTTS---EEEEEE-S
T ss_pred CCcccEEEEEecCC------CcceEEEcCCCCEEEEEecCCCceeEeccccc-cceeecccccccccccCCCceeEEecC
Confidence 99999988887654 56789999999999955 7899999999773 222222211111112345577888888
Q ss_pred CCCcEEEEEecCCeEEEEecCCceEe--EEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 233 THTGMLAIGSYSQTSAIYREDNMELL--YVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 233 ~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
....++++--+.+.|.+.|....+.+ ..+. .........|+|++++++.+...++.|-++|..+++.+
T Consensus 138 ~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~-~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v 207 (369)
T PF02239_consen 138 GRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIK-VGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLV 207 (369)
T ss_dssp SSSEEEEEETTTTEEEEEETTTSSCEEEEEEE---TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEE
T ss_pred CCCEEEEEEccCCeEEEEEeccccccceeeec-ccccccccccCcccceeeecccccceeEEEeeccceEE
Confidence 44445555555688999998765433 2333 34567889999999998877657889999999988765
No 225
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.58 E-value=1.8e-13 Score=103.21 Aligned_cols=186 Identities=18% Similarity=0.269 Sum_probs=123.7
Q ss_pred EEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEE-EEE
Q 022019 66 IKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF-AST 144 (304)
Q Consensus 66 i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l-~~~ 144 (304)
.+|||+|+++|+++.- .+.|=|..+-+...-.... ..|.-+.| ..+..++ ...
T Consensus 14 c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~cl------------------dki~yieW-------~ads~~ilC~~ 67 (447)
T KOG4497|consen 14 CSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLCL------------------DKIVYIEW-------KADSCHILCVA 67 (447)
T ss_pred eeECCCCCeeeeeeee-EEEEeccchhhHHHHHHHH------------------HHhhheee-------eccceeeeeee
Confidence 6899999999998865 7777777655432211111 34555566 3355454 445
Q ss_pred eCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceeeeeeeccccccc
Q 022019 145 TRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQA 222 (304)
Q Consensus 145 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 222 (304)
..|+.|.+|++...+....+..... ++.++.|+|||+.|. ++ .+-.|.+|.+.+... .-+ .-..
T Consensus 68 yk~~~vqvwsl~Qpew~ckIdeg~a-----gls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~-----~~~----~~pK 133 (447)
T KOG4497|consen 68 YKDPKVQVWSLVQPEWYCKIDEGQA-----GLSSISWSPDGRHILLTSEFDLRITVWSLNTQKG-----YLL----PHPK 133 (447)
T ss_pred eccceEEEEEeecceeEEEeccCCC-----cceeeeECCCcceEeeeecceeEEEEEEecccee-----EEe----cccc
Confidence 6788999999998887777766554 888999999998888 55 899999999987321 111 1112
Q ss_pred cceeEEEeecCCCcEEEEEecCC------------------------------------eEEEEecCCceEeEEeccccC
Q 022019 223 GIMSAIAFSPTHTGMLAIGSYSQ------------------------------------TSAIYREDNMELLYVLHGQEG 266 (304)
Q Consensus 223 ~~v~~~~~~p~~~~~l~~~~~dg------------------------------------~i~i~d~~~~~~~~~~~~~~~ 266 (304)
..+..++|+| ++++.+.++.-. .+.+||.--...+..+. -.-
T Consensus 134 ~~~kg~~f~~-dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe-~~l 211 (447)
T KOG4497|consen 134 TNVKGYAFHP-DGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYE-RGL 211 (447)
T ss_pred cCceeEEECC-CCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeee-ecc
Confidence 2357788888 666666665321 23334321111122221 124
Q ss_pred CeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 267 GVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 267 ~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
++..++|+|.+++|+.|+ .|+.+++.+
T Consensus 212 G~k~v~wsP~~qflavGs-yD~~lrvln 238 (447)
T KOG4497|consen 212 GLKFVEWSPCNQFLAVGS-YDQMLRVLN 238 (447)
T ss_pred ceeEEEeccccceEEeec-cchhhhhhc
Confidence 688999999999999999 999998765
No 226
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.56 E-value=3.6e-13 Score=115.43 Aligned_cols=199 Identities=16% Similarity=0.186 Sum_probs=147.4
Q ss_pred ceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEE
Q 022019 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF 141 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 141 (304)
.|..-.+.-+...++.++.++.+.+||........+...... ...++. ....++++.-++
T Consensus 89 wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er----------------~~l~~~----~~~g~s~~~~~i 148 (967)
T KOG0974|consen 89 WIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDER----------------CTLYSS----LIIGDSAEELYI 148 (967)
T ss_pred cccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCce----------------EEEEeE----EEEeccCcEEEE
Confidence 344444445566788888888999999886654433322210 011111 112336677789
Q ss_pred EEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCCccceeeeeeeccccc
Q 022019 142 ASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEG 220 (304)
Q Consensus 142 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~ 220 (304)
++|+.-+.|.+|+....+....+..| .+.+.++.|+.+|++++ ++.|.++++|++.+.+... ....+
T Consensus 149 ~~gsv~~~iivW~~~~dn~p~~l~GH-----eG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~-------~~~fg 216 (967)
T KOG0974|consen 149 ASGSVFGEIIVWKPHEDNKPIRLKGH-----EGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLG-------CTGFG 216 (967)
T ss_pred EeccccccEEEEeccccCCcceeccc-----CCceEEEEEccCCcEEEEEecCcceeeeecccccccC-------ccccc
Confidence 99999999999998743333334444 44999999999999999 5799999999998743221 33478
Q ss_pred cccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccC-CeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 221 QAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEG-GVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 221 ~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
|...+..++|.| + .+++++.|-+.++|+. +++.+..+.+|.. .+..++..++...++|++ .|+.+++|++..
T Consensus 217 HsaRvw~~~~~~-n--~i~t~gedctcrvW~~-~~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g-~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 217 HSARVWACCFLP-N--RIITVGEDCTCRVWGV-NGTQLEVYDEHSGKGIWKIAVPIGVIIKVTGG-NDSTLKLWDLNG 289 (967)
T ss_pred ccceeEEEEecc-c--eeEEeccceEEEEEec-ccceehhhhhhhhcceeEEEEcCCceEEEeec-cCcchhhhhhhc
Confidence 999999999999 4 8999999999999975 4555568888865 699999999999999999 999999999865
No 227
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.56 E-value=1.8e-11 Score=97.25 Aligned_cols=216 Identities=12% Similarity=0.134 Sum_probs=135.4
Q ss_pred EcCCCCeEEEecC----------CCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC
Q 022019 68 WSPDGSSFLTSSE----------DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (304)
Q Consensus 68 ~s~~~~~l~s~~~----------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (304)
++|||+.|+.+.. +..|.+||..+.+...++.... .+-....-.|...+++||
T Consensus 53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~-----------------~p~~~~~~~~~~~~ls~d 115 (352)
T TIGR02658 53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPE-----------------GPRFLVGTYPWMTSLTPD 115 (352)
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCC-----------------CchhhccCccceEEECCC
Confidence 9999998777654 7899999999876654433211 000001112233456888
Q ss_pred ccEEEEEe-C-CCCEEEEEcCCCeeeEEeecccccc-------------------c-------ccceEEE----------
Q 022019 138 SCVFASTT-R-DHPIHLWDATTGLLRCTYRAYDAVD-------------------E-------ITAAFSV---------- 179 (304)
Q Consensus 138 ~~~l~~~~-~-dg~i~i~d~~~~~~~~~~~~~~~~~-------------------~-------~~~v~~i---------- 179 (304)
|+++++.. . +..|.+.|+.+++.+..+....... . ...+...
T Consensus 116 gk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v 195 (352)
T TIGR02658 116 NKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYL 195 (352)
T ss_pred CCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCceEEeeeeeecCCcccc
Confidence 88877665 3 5778888888776665544322100 0 0001111
Q ss_pred ----EECC-CCcEEEEEcCCeEEEEEcCCCCccceeeeeeeccc----cccccceeEEEeecCCCcEEEEEe--------
Q 022019 180 ----AFNP-TGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNK----EGQAGIMSAIAFSPTHTGMLAIGS-------- 242 (304)
Q Consensus 180 ----~~~~-~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~p~~~~~l~~~~-------- 242 (304)
.|.+ +|+.++++..|.|++.|+................. .-..+.+.-++++|+++++++...
T Consensus 196 ~~rP~~~~~dg~~~~vs~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk 275 (352)
T TIGR02658 196 INHPAYSNKSGRLVWPTYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHK 275 (352)
T ss_pred ccCCceEcCCCcEEEEecCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCcccccc
Confidence 1233 78888888669999999765332221111111000 012233455999995555444332
Q ss_pred -cCCeEEEEecCCceEeEEeccccCCeEEEEECCCCc-EEEEeeccCCeEEEEecccceee
Q 022019 243 -YSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN-YLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 243 -~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
..+.|.++|..+++.+..+.. ...+..++++|||+ +|++....++.|.++|+.+++.+
T Consensus 276 ~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i 335 (352)
T TIGR02658 276 TASRFLFVVDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKEL 335 (352)
T ss_pred CCCCEEEEEECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEE
Confidence 124799999999999999874 45789999999999 88877756889999999998765
No 228
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.55 E-value=2.6e-12 Score=106.70 Aligned_cols=205 Identities=14% Similarity=0.090 Sum_probs=115.4
Q ss_pred CCCCceeEEEEcCCCCe--E-EEecCCC--eEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 58 IPNNFLKGIKWSPDGSS--F-LTSSEDK--TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~--l-~s~~~dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
.....+..-+|+|||+. + ++...+| .|.+.++.++... ............
T Consensus 182 ~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~------------------~lt~~~g~~~~p------- 236 (428)
T PRK01029 182 QEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGK------------------KILALQGNQLMP------- 236 (428)
T ss_pred cCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCce------------------EeecCCCCccce-------
Confidence 34556678899999975 2 2444444 4666676644221 000011122223
Q ss_pred eeCCCccEEEEEeC-CC----CEEEEEcCCC---eeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEE--
Q 022019 133 ASDPTSCVFASTTR-DH----PIHLWDATTG---LLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFD-- 200 (304)
Q Consensus 133 ~~~~~~~~l~~~~~-dg----~i~i~d~~~~---~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d-- 200 (304)
+++|||+.|+..+. +| .+.+|++..+ ........... ......|+|||+.|+ ++ .+|...+|.
T Consensus 237 ~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~-----~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~ 311 (428)
T PRK01029 237 TFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFG-----TQGNPSFSPDGTRLVFVSNKDGRPRIYIMQ 311 (428)
T ss_pred EECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCC-----CcCCeEECCCCCEEEEEECCCCCceEEEEE
Confidence 45899988877653 23 3344676653 22222221111 335689999999888 55 566555554
Q ss_pred cCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC--CeEEEEecCCceEeEEeccccCCeEEEEECCCCc
Q 022019 201 VHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS--QTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN 278 (304)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 278 (304)
+...+... ..+ ......+....|+|++..+++++..+ ..|.+||+.+++... +......+....|+|||+
T Consensus 312 ~~~~g~~~---~~l----t~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~~~~~~~~p~wSpDG~ 383 (428)
T PRK01029 312 IDPEGQSP---RLL----TKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ-LTTSPENKESPSWAIDSL 383 (428)
T ss_pred Ccccccce---EEe----ccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE-ccCCCCCccceEECCCCC
Confidence 43211111 111 11223456789999544444444433 369999998876543 333344567899999999
Q ss_pred EEEEeecc--CCeEEEEeccccee
Q 022019 279 YLYTGGRK--DPYILCWDLRKAVQ 300 (304)
Q Consensus 279 ~l~~~~~~--d~~i~vwd~~~~~~ 300 (304)
+|+..+.. ...|.++|+..++.
T Consensus 384 ~L~f~~~~~g~~~L~~vdl~~g~~ 407 (428)
T PRK01029 384 HLVYSAGNSNESELYLISLITKKT 407 (428)
T ss_pred EEEEEECCCCCceEEEEECCCCCE
Confidence 88755412 35788899877643
No 229
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.55 E-value=8e-14 Score=101.88 Aligned_cols=171 Identities=15% Similarity=0.152 Sum_probs=115.3
Q ss_pred CCCCceeEEEEcC-CCC--eEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 58 IPNNFLKGIKWSP-DGS--SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 58 ~h~~~V~~i~~s~-~~~--~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
+..+.|.|..+.. +++ +|+.|-.+|.+.+||+.++.....+.. ......-...|..+|.++.|.+
T Consensus 148 ~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~-------~~kv~~~~ash~qpvlsldyas----- 215 (323)
T KOG0322|consen 148 SKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQ-------SSKVESPNASHKQPVLSLDYAS----- 215 (323)
T ss_pred cccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeecccc-------ccccccchhhccCcceeeeech-----
Confidence 4466788888654 444 455667799999999997643222211 1122223445678888888843
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCCccceeeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
.-..=++|+.+..+..|++........+.......+ ..|..+.+-||++.+| +|-|+.|+||..++. .
T Consensus 216 --~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lkn-pGv~gvrIRpD~KIlATAGWD~RiRVyswrtl--------~ 284 (323)
T KOG0322|consen 216 --SCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKN-PGVSGVRIRPDGKILATAGWDHRIRVYSWRTL--------N 284 (323)
T ss_pred --hhcCCcCCCccccceeeeeccccCcccccceEEecC-CCccceEEccCCcEEeecccCCcEEEEEeccC--------C
Confidence 222345667777788888864321111111111111 1678899999999999 569999999999873 2
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEec
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~ 252 (304)
......-|.+.|.+++|+| +..++|+++.|+.|.+|++
T Consensus 285 pLAVLkyHsagvn~vAfsp-d~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 285 PLAVLKYHSAGVNAVAFSP-DCELMAAASKDARISLWKL 322 (323)
T ss_pred chhhhhhhhcceeEEEeCC-CCchhhhccCCceEEeeec
Confidence 2333366888999999999 6779999999999999986
No 230
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.55 E-value=1.1e-13 Score=103.71 Aligned_cols=235 Identities=14% Similarity=0.243 Sum_probs=153.0
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCC-CccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENG-ISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (304)
..+.|+++.|...|.||++|...|.|.+|.-.... +.+.+... +........-.-...-...|..+.|... ..
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~te-FQshe~EFDYLkSleieEKin~I~w~~~-----t~ 98 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTE-FQSHELEFDYLKSLEIEEKINAIEWFDD-----TG 98 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhh-hcccccchhhhhhccHHHHhhheeeecC-----CC
Confidence 45679999999999999999999999999765332 11110000 0000000000011112245667777432 12
Q ss_pred ccEEEEEeCCCCEEEEEcCCCeeeE---------------------------Eeecc-----------cccccccceEEE
Q 022019 138 SCVFASTTRDHPIHLWDATTGLLRC---------------------------TYRAY-----------DAVDEITAAFSV 179 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~~~~---------------------------~~~~~-----------~~~~~~~~v~~i 179 (304)
...++..+.|++|++|.+....... .+..+ ....|...+.++
T Consensus 99 r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSi 178 (460)
T COG5170 99 RNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSI 178 (460)
T ss_pred cceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeee
Confidence 3467777789999999886431100 00000 011344568899
Q ss_pred EECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceE--
Q 022019 180 AFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL-- 257 (304)
Q Consensus 180 ~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~-- 257 (304)
.|+.|...++++.|=.|.+|++......+................|++..|+|....++.-.+..|.|++-|++...+
T Consensus 179 S~NsD~et~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcd 258 (460)
T COG5170 179 SFNSDKETLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCD 258 (460)
T ss_pred eecCchheeeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhcc
Confidence 999999999999999999999987766655544433333444556899999997778888899999999999984321
Q ss_pred ----eEE----------eccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 258 ----LYV----------LHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 258 ----~~~----------~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+.. +.+-...|..+.|+++|+++++-. =-++++||++..+..
T Consensus 259 n~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRd--yltvkiwDvnm~k~p 314 (460)
T COG5170 259 NSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRD--YLTVKIWDVNMAKNP 314 (460)
T ss_pred CchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEec--cceEEEEecccccCC
Confidence 111 112234688899999999999765 568999999876543
No 231
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.54 E-value=3.9e-12 Score=106.68 Aligned_cols=201 Identities=13% Similarity=0.090 Sum_probs=119.9
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCC---CeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSED---KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~d---g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
.+..+...+...+|+|||+.|+..+.+ ..|.+||+.++.... + ...........
T Consensus 193 ~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-----------------l-~~~~g~~~~~~----- 249 (430)
T PRK00178 193 TLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-----------------I-TNFEGLNGAPA----- 249 (430)
T ss_pred EEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-----------------c-cCCCCCcCCeE-----
Confidence 344567789999999999998876543 368888987653210 0 00011122334
Q ss_pred ceeCCCccEEEE-EeCCC--CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCC--eEEEEEcCCC
Q 022019 132 SASDPTSCVFAS-TTRDH--PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNK--SVRVFDVHRP 204 (304)
Q Consensus 132 ~~~~~~~~~l~~-~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~--~i~v~d~~~~ 204 (304)
|+|+|+.|+. .+.+| .|+++|+.+++... +..... ......|+|+|+.|+ ++ .++ .|+++|+..+
T Consensus 250 --~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~-lt~~~~-----~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g 321 (430)
T PRK00178 250 --WSPDGSKLAFVLSKDGNPEIYVMDLASRQLSR-VTNHPA-----IDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGG 321 (430)
T ss_pred --ECCCCCEEEEEEccCCCceEEEEECCCCCeEE-cccCCC-----CcCCeEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 4889987764 44455 58888998876543 322221 345678999999887 44 343 5677776543
Q ss_pred CccceeeeeeeccccccccceeEEEeecCCCcEEEEEe-cCC--eEEEEecCCceEeEEeccccCCeEEEEECCCCcEEE
Q 022019 205 GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQ--TSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~dg--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 281 (304)
. ... +.. .+ .......|+|++ ..++..+ .++ .|.++|+.+++.. .+.. ........|+|||++|+
T Consensus 322 ~--~~~---lt~--~~--~~~~~~~~Spdg-~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt~-~~~~~~p~~spdg~~i~ 389 (430)
T PRK00178 322 R--AER---VTF--VG--NYNARPRLSADG-KTLVMVHRQDGNFHVAAQDLQRGSVR-ILTD-TSLDESPSVAPNGTMLI 389 (430)
T ss_pred C--EEE---eec--CC--CCccceEECCCC-CEEEEEEccCCceEEEEEECCCCCEE-EccC-CCCCCCceECCCCCEEE
Confidence 2 111 111 11 123457899954 4555444 344 4888998877543 3331 22233568999999998
Q ss_pred EeeccCC--eEEEEecccc
Q 022019 282 TGGRKDP--YILCWDLRKA 298 (304)
Q Consensus 282 ~~~~~d~--~i~vwd~~~~ 298 (304)
.++..++ .|.++++..+
T Consensus 390 ~~~~~~g~~~l~~~~~~g~ 408 (430)
T PRK00178 390 YATRQQGRGVLMLVSINGR 408 (430)
T ss_pred EEEecCCceEEEEEECCCC
Confidence 7763333 4667777543
No 232
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.54 E-value=3.2e-11 Score=97.83 Aligned_cols=214 Identities=16% Similarity=0.182 Sum_probs=125.2
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+......-..+.|+|||+++++++.||.|.++|+.+.+....+ ..+.....+ ++
T Consensus 31 ~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i------------------~~G~~~~~i-------~~ 85 (369)
T PF02239_consen 31 RIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATI------------------KVGGNPRGI-------AV 85 (369)
T ss_dssp EEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEE------------------E-SSEEEEE-------EE
T ss_pred EEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEE------------------ecCCCcceE-------EE
Confidence 44433333455789999999999999999999999876543221 222333334 55
Q ss_pred CCCccEEEEEe-CCCCEEEEEcCCCeeeEEeecccccc--cccceEEEEECCCCcEEEEE--cCCeEEEEEcCCCCccce
Q 022019 135 DPTSCVFASTT-RDHPIHLWDATTGLLRCTYRAYDAVD--EITAAFSVAFNPTGTKIFAG--YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 135 ~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~--~~~~v~~i~~~~~~~~l~~~--~d~~i~v~d~~~~~~~~~ 209 (304)
++||++++++. ..+.+.++|.++.+.+..+....... ....+.++..+|....++.. ..+.|.+.|.......
T Consensus 86 s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~-- 163 (369)
T PF02239_consen 86 SPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNL-- 163 (369)
T ss_dssp --TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCE--
T ss_pred cCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEecccccc--
Confidence 89999988775 68899999999999888876543211 23367788888888866644 4588888887654211
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEe----------------------------
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVL---------------------------- 261 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---------------------------- 261 (304)
....+ ..........|+|++..++++...++.|-++|.++++.+..+
T Consensus 164 ~~~~i-----~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~ 238 (369)
T PF02239_consen 164 KVTTI-----KVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGL 238 (369)
T ss_dssp EEEEE-----E--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBS
T ss_pred ceeee-----cccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccc
Confidence 11111 122335678999944444454556677888887766443321
Q ss_pred ---------------------------ccccCCeEEEEECCCCcEEEEe---eccCCeEEEEecccceee
Q 022019 262 ---------------------------HGQEGGVTHVQFSRDGNYLYTG---GRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 262 ---------------------------~~~~~~v~~~~~~~~~~~l~~~---~~~d~~i~vwd~~~~~~~ 301 (304)
....++ .-+.-+|++++|++. +...+.|.++|.++.+.+
T Consensus 239 ~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~ 307 (369)
T PF02239_consen 239 GYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVV 307 (369)
T ss_dssp SSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEE
T ss_pred cceecccccCCccccchhhcCeEEEEEECCCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCccee
Confidence 111122 446668999999988 425689999999987544
No 233
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.54 E-value=3.6e-12 Score=106.36 Aligned_cols=161 Identities=19% Similarity=0.217 Sum_probs=99.4
Q ss_pred cCCeEEEEeecCccceeCCCccEEEEEeCC---CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-c
Q 022019 118 EGESVYDFCWFPHMSASDPTSCVFASTTRD---HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-Y 192 (304)
Q Consensus 118 ~~~~v~~~~~~~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~ 192 (304)
+...+...+| +|+|+.|+..+.+ ..|++||+.+++......... ......|+|||+.|+ +. .
T Consensus 194 ~~~~v~~p~w-------SPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g------~~~~~~~SPDG~~la~~~~~ 260 (427)
T PRK02889 194 SPEPIISPAW-------SPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKG------SNSAPAWSPDGRTLAVALSR 260 (427)
T ss_pred CCCCcccceE-------cCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCC------CccceEECCCCCEEEEEEcc
Confidence 3355666666 8899988887643 359999999887543322211 445789999999887 44 6
Q ss_pred CCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEec--CCceEeEEeccccCCeEE
Q 022019 193 NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE--DNMELLYVLHGQEGGVTH 270 (304)
Q Consensus 193 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~--~~~~~~~~~~~~~~~v~~ 270 (304)
++...||.+...+.... .+ ..+........|+|++..+++++..+|...||.+ ..+... .+..+......
T Consensus 261 ~g~~~Iy~~d~~~~~~~---~l----t~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~-~lt~~g~~~~~ 332 (427)
T PRK02889 261 DGNSQIYTVNADGSGLR---RL----TQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQ-RVTFTGSYNTS 332 (427)
T ss_pred CCCceEEEEECCCCCcE---EC----CCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceE-EEecCCCCcCc
Confidence 77766666543222211 11 2223345678899954444444444566666644 444322 22222333456
Q ss_pred EEECCCCcEEEEeeccCC---eEEEEeccccee
Q 022019 271 VQFSRDGNYLYTGGRKDP---YILCWDLRKAVQ 300 (304)
Q Consensus 271 ~~~~~~~~~l~~~~~~d~---~i~vwd~~~~~~ 300 (304)
..|+|||++|+..+ .++ .|.+||+.+++.
T Consensus 333 ~~~SpDG~~Ia~~s-~~~g~~~I~v~d~~~g~~ 364 (427)
T PRK02889 333 PRISPDGKLLAYIS-RVGGAFKLYVQDLATGQV 364 (427)
T ss_pred eEECCCCCEEEEEE-ccCCcEEEEEEECCCCCe
Confidence 89999999998777 443 699999987653
No 234
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.54 E-value=5.5e-12 Score=105.60 Aligned_cols=199 Identities=16% Similarity=0.153 Sum_probs=122.7
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCC---CeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSED---KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~d---g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
.+..+...+...+|+|||++|+.++.+ ..|.+||+.++... ........+...+|
T Consensus 184 ~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~------------------~~~~~~~~~~~~~~---- 241 (417)
T TIGR02800 184 TITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQRE------------------KVASFPGMNGAPAF---- 241 (417)
T ss_pred EeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEE------------------EeecCCCCccceEE----
Confidence 444567779999999999999877643 47999998765321 11111123333444
Q ss_pred ceeCCCccEEEE-EeCCC--CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCC--eEEEEEcCCC
Q 022019 132 SASDPTSCVFAS-TTRDH--PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNK--SVRVFDVHRP 204 (304)
Q Consensus 132 ~~~~~~~~~l~~-~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~--~i~v~d~~~~ 204 (304)
+|+|+.|+. .+.++ .|++||+.++.... +..+.. ......|+|+|+.|+ ++ .++ .|+++|+...
T Consensus 242 ---spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~~-----~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~ 312 (417)
T TIGR02800 242 ---SPDGSKLAVSLSKDGNPDIYVMDLDGKQLTR-LTNGPG-----IDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGG 312 (417)
T ss_pred ---CCCCCEEEEEECCCCCccEEEEECCCCCEEE-CCCCCC-----CCCCEEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 888887664 44444 58999988775433 222221 334678999999887 44 333 5777777642
Q ss_pred CccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCC---eEEEEecCCceEeEEeccccCCeEEEEECCCCcEEE
Q 022019 205 GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ---TSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 281 (304)
. . ..+ ..+......+.|+| ++.+++.++.++ .|.+||+.++... .+... .......|+|+|++|+
T Consensus 313 ~--~---~~l----~~~~~~~~~~~~sp-dg~~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~-~~~~~p~~spdg~~l~ 380 (417)
T TIGR02800 313 E--V---RRL----TFRGGYNASPSWSP-DGDLIAFVHREGGGFNIAVMDLDGGGER-VLTDT-GLDESPSFAPNGRMIL 380 (417)
T ss_pred C--E---EEe----ecCCCCccCeEECC-CCCEEEEEEccCCceEEEEEeCCCCCeE-EccCC-CCCCCceECCCCCEEE
Confidence 1 1 111 11223456789999 566676666665 7889998775432 33322 2345678999999998
Q ss_pred EeeccCC--eEEEEecc
Q 022019 282 TGGRKDP--YILCWDLR 296 (304)
Q Consensus 282 ~~~~~d~--~i~vwd~~ 296 (304)
.++..++ .+.+.+..
T Consensus 381 ~~~~~~~~~~l~~~~~~ 397 (417)
T TIGR02800 381 YATTRGGRGVLGLVSTD 397 (417)
T ss_pred EEEeCCCcEEEEEEECC
Confidence 8873332 45555543
No 235
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.53 E-value=5e-12 Score=105.85 Aligned_cols=199 Identities=13% Similarity=0.089 Sum_probs=115.4
Q ss_pred ecCCCCceeEEEEcCCCCeEEEecC-CC--eEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 56 SSIPNNFLKGIKWSPDGSSFLTSSE-DK--TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 56 ~~~h~~~V~~i~~s~~~~~l~s~~~-dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
+..+...+.+..|+|||+.|+..+. ++ .|.+||+.+++... + ..........
T Consensus 213 l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-----------------l-t~~~g~~~~~------- 267 (448)
T PRK04792 213 LLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-----------------V-TSFPGINGAP------- 267 (448)
T ss_pred eecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-----------------e-cCCCCCcCCe-------
Confidence 3445667889999999998887654 23 57888887543210 0 0000111223
Q ss_pred eeCCCccEEEE-EeCCCC--EEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCC--eEEEEEcCCCC
Q 022019 133 ASDPTSCVFAS-TTRDHP--IHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNK--SVRVFDVHRPG 205 (304)
Q Consensus 133 ~~~~~~~~l~~-~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~--~i~v~d~~~~~ 205 (304)
+++|+|+.|+. .+.+|. |+++|+.+++... +..+.. ......|+|||+.|+ ++ .++ .|+++|+..+.
T Consensus 268 ~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~-lt~~~~-----~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~ 341 (448)
T PRK04792 268 RFSPDGKKLALVLSKDGQPEIYVVDIATKALTR-ITRHRA-----IDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGK 341 (448)
T ss_pred eECCCCCEEEEEEeCCCCeEEEEEECCCCCeEE-CccCCC-----CccceEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence 44889987765 455664 7888888776543 222221 446789999999888 44 344 46666665421
Q ss_pred ccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCC--eEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEe
Q 022019 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ--TSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTG 283 (304)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 283 (304)
.. .+. ..+ ......+|+|++..++++...++ .|.++|+.+++.. .+... .......|+|||++|+..
T Consensus 342 --~~---~Lt--~~g--~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~-~lt~~-~~d~~ps~spdG~~I~~~ 410 (448)
T PRK04792 342 --VS---RLT--FEG--EQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQ-VLTST-RLDESPSVAPNGTMVIYS 410 (448)
T ss_pred --EE---EEe--cCC--CCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeE-EccCC-CCCCCceECCCCCEEEEE
Confidence 11 111 111 11335689995554444444445 3566787776543 33322 122356899999998776
Q ss_pred eccCCe--EEEEecc
Q 022019 284 GRKDPY--ILCWDLR 296 (304)
Q Consensus 284 ~~~d~~--i~vwd~~ 296 (304)
...++. +.+++..
T Consensus 411 ~~~~g~~~l~~~~~~ 425 (448)
T PRK04792 411 TTYQGKQVLAAVSID 425 (448)
T ss_pred EecCCceEEEEEECC
Confidence 634443 6677764
No 236
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.53 E-value=5.6e-12 Score=96.55 Aligned_cols=148 Identities=14% Similarity=0.217 Sum_probs=110.2
Q ss_pred EEEEEeCC--CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeecc
Q 022019 140 VFASTTRD--HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGN 217 (304)
Q Consensus 140 ~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 217 (304)
++|..+.+ +.+++++++.+..++.+.... .|.++.++. +.|++.-...|+|||++.. +.+.++...
T Consensus 58 LvaiV~~~qpr~Lkv~~~Kk~~~ICe~~fpt------~IL~VrmNr--~RLvV~Lee~IyIydI~~M----klLhTI~t~ 125 (391)
T KOG2110|consen 58 LVAIVSIKQPRKLKVVHFKKKTTICEIFFPT------SILAVRMNR--KRLVVCLEESIYIYDIKDM----KLLHTIETT 125 (391)
T ss_pred eeEEEecCCCceEEEEEcccCceEEEEecCC------ceEEEEEcc--ceEEEEEcccEEEEecccc----eeehhhhcc
Confidence 55555544 459999999988888887766 888999875 4677665556999999863 222222221
Q ss_pred ccccccceeEEEeecCCCcEEEEEe--cCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCC-eEEEEe
Q 022019 218 KEGQAGIMSAIAFSPTHTGMLAIGS--YSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDP-YILCWD 294 (304)
Q Consensus 218 ~~~~~~~v~~~~~~p~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~-~i~vwd 294 (304)
..+...+.++.+++ .+.+++.-+ ..|.|.|||..+.+++..+..|++.+.+++|+++|.+|||++ +.| .|||+.
T Consensus 126 -~~n~~gl~AlS~n~-~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATAS-eKGTVIRVf~ 202 (391)
T KOG2110|consen 126 -PPNPKGLCALSPNN-ANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATAS-EKGTVIRVFS 202 (391)
T ss_pred -CCCccceEeeccCC-CCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEec-cCceEEEEEE
Confidence 22334455666666 444666532 368999999999999999999999999999999999999999 666 589999
Q ss_pred cccceeee
Q 022019 295 LRKAVQVV 302 (304)
Q Consensus 295 ~~~~~~~~ 302 (304)
+.+|+++.
T Consensus 203 v~~G~kl~ 210 (391)
T KOG2110|consen 203 VPEGQKLY 210 (391)
T ss_pred cCCccEee
Confidence 99997764
No 237
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.53 E-value=7e-13 Score=102.09 Aligned_cols=189 Identities=18% Similarity=0.253 Sum_probs=133.2
Q ss_pred CceeEEEEcCCCC-eEEEecCC--CeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC
Q 022019 61 NFLKGIKWSPDGS-SFLTSSED--KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (304)
Q Consensus 61 ~~V~~i~~s~~~~-~l~s~~~d--g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (304)
..+..|.-++... .+|+|+.. ..+.+||+...+.......... + .+.+.-.--++++.|.+. + .
T Consensus 149 ~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpn--D------~L~LrVPvW~tdi~Fl~g----~-~ 215 (412)
T KOG3881|consen 149 PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPN--D------RLGLRVPVWITDIRFLEG----S-P 215 (412)
T ss_pred CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCC--c------cccceeeeeeccceecCC----C-C
Confidence 3466666666444 56668888 8899999987644333322211 0 011111122334444332 1 1
Q ss_pred ccEEEEEeCCCCEEEEEcCCC-eeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeee
Q 022019 138 SCVFASTTRDHPIHLWDATTG-LLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLK 215 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~ 215 (304)
...|++++.-+.+++||.+.+ +++..+..... +++++...|+++++++| ..+.+..||++.. ..+.
T Consensus 216 ~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~-----~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~-------kl~g 283 (412)
T KOG3881|consen 216 NYKFATITRYHQVRLYDTRHQRRPVAQFDFLEN-----PISSTGLTPSGNFIYTGNTKGQLAKFDLRGG-------KLLG 283 (412)
T ss_pred CceEEEEecceeEEEecCcccCcceeEeccccC-----cceeeeecCCCcEEEEecccchhheecccCc-------eeec
Confidence 678999999999999999865 35566665544 89999999999999988 8999999999974 2233
Q ss_pred ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCC
Q 022019 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRD 276 (304)
Q Consensus 216 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~ 276 (304)
..+.+..+.++++..+| ...++++++-|..+||+|+++.+++.... -...++++.+.++
T Consensus 284 ~~~kg~tGsirsih~hp-~~~~las~GLDRyvRIhD~ktrkll~kvY-vKs~lt~il~~~~ 342 (412)
T KOG3881|consen 284 CGLKGITGSIRSIHCHP-THPVLASCGLDRYVRIHDIKTRKLLHKVY-VKSRLTFILLRDD 342 (412)
T ss_pred cccCCccCCcceEEEcC-CCceEEeeccceeEEEeecccchhhhhhh-hhccccEEEecCC
Confidence 33577788899999999 78899999999999999999977766554 2455677777654
No 238
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.52 E-value=7.3e-13 Score=106.89 Aligned_cols=153 Identities=14% Similarity=0.201 Sum_probs=116.3
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccc------cccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCc
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDA------VDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGR 206 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~ 206 (304)
+++...+|++|+.+|.|-.||.+......++..... ......|+++.|+.+|-.+++| .+|.|.|||++...
T Consensus 183 in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~- 261 (703)
T KOG2321|consen 183 INEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASK- 261 (703)
T ss_pred ecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCC-
Confidence 366778999999999999999998766655544332 1223359999999999999988 99999999999852
Q ss_pred cceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeecc
Q 022019 207 DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRK 286 (304)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 286 (304)
.+.....+...+|..+.|.+.+..--++......++|||-.++++...+.. ...+..+++-|++.+++++. .
T Consensus 262 ------pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd~~~Gk~~asiEp-t~~lND~C~~p~sGm~f~An-e 333 (703)
T KOG2321|consen 262 ------PLLVKDHGYELPIKKLDWQDTDQQNKVVSMDKRILKIWDECTGKPMASIEP-TSDLNDFCFVPGSGMFFTAN-E 333 (703)
T ss_pred ------ceeecccCCccceeeecccccCCCceEEecchHHhhhcccccCCceeeccc-cCCcCceeeecCCceEEEec-C
Confidence 222222445667999999885444444445557799999999999988874 55699999999999999998 7
Q ss_pred CCeEEEEec
Q 022019 287 DPYILCWDL 295 (304)
Q Consensus 287 d~~i~vwd~ 295 (304)
++.+..|=+
T Consensus 334 ~~~m~~yyi 342 (703)
T KOG2321|consen 334 SSKMHTYYI 342 (703)
T ss_pred CCcceeEEc
Confidence 777766644
No 239
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.52 E-value=6.8e-12 Score=93.34 Aligned_cols=198 Identities=17% Similarity=0.192 Sum_probs=136.3
Q ss_pred CCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc-EEEEEeCCCCEEEEEcCCC
Q 022019 80 EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC-VFASTTRDHPIHLWDATTG 158 (304)
Q Consensus 80 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~ 158 (304)
..|.+.+|++.+.+... ...+.......+..+.|..... +|. .++-+..+|.|.++.....
T Consensus 44 R~Gkl~Lys~~d~~~~~--------------l~~~q~~dts~~~dm~w~~~~~----~g~~~l~~a~a~G~i~~~r~~~~ 105 (339)
T KOG0280|consen 44 RSGKLHLYSLEDMKLSP--------------LDTLQCTDTSTEFDMLWRIRET----DGDFNLLDAHARGQIQLYRNDED 105 (339)
T ss_pred eccceEEEeecccccCc--------------cceeeeecccccceeeeeeccC----CccceeeeccccceEEEEeeccc
Confidence 34678888887655432 1112233345677788865432 233 5677778899999987765
Q ss_pred eeeEEeecccccccc-cceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCc
Q 022019 159 LLRCTYRAYDAVDEI-TAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTG 236 (304)
Q Consensus 159 ~~~~~~~~~~~~~~~-~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 236 (304)
.....+.......-. ....++.|++.+..++++ .+|.+.+-+... ...+. ....+.|........|+-....
T Consensus 106 ~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~--~~le~----vq~wk~He~E~Wta~f~~~~pn 179 (339)
T KOG0280|consen 106 ESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYETE--MVLEK----VQTWKVHEFEAWTAKFSDKEPN 179 (339)
T ss_pred eeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEecce--eeeee----cccccccceeeeeeecccCCCc
Confidence 555555544432211 125688999999999988 888888555432 11111 1233678888888999987788
Q ss_pred EEEEEecCCeEEEEecC-CceEeEE-eccccCCeEEEEECC-CCcEEEEeeccCCeEEEEecccceeee
Q 022019 237 MLAIGSYSQTSAIYRED-NMELLYV-LHGQEGGVTHVQFSR-DGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 237 ~l~~~~~dg~i~i~d~~-~~~~~~~-~~~~~~~v~~~~~~~-~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
++.+|++|+.+..||++ .++.+.. .+.|...|.++.-+| .+.+|++|+ .|..|++||.++-.+.+
T Consensus 180 lvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGs-YDe~i~~~DtRnm~kPl 247 (339)
T KOG0280|consen 180 LVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGS-YDECIRVLDTRNMGKPL 247 (339)
T ss_pred eEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEec-cccceeeeehhcccCcc
Confidence 99999999999999999 3444443 457888999999876 577899999 99999999999644443
No 240
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.51 E-value=9.7e-11 Score=89.94 Aligned_cols=220 Identities=17% Similarity=0.204 Sum_probs=144.0
Q ss_pred eEEEEcCCCCeEEEecC-CCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEE
Q 022019 64 KGIKWSPDGSSFLTSSE-DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFA 142 (304)
Q Consensus 64 ~~i~~s~~~~~l~s~~~-dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~ 142 (304)
+.++++++|++++++.+ -|.|.++-+.+..............+ .+.....-.-+++...++|++++++
T Consensus 92 ~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g-----------~~p~~rQ~~~h~H~a~~tP~~~~l~ 160 (346)
T COG2706 92 CYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTG-----------SGPHERQESPHVHSANFTPDGRYLV 160 (346)
T ss_pred eEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCC-----------CCCCccccCCccceeeeCCCCCEEE
Confidence 88999999999999876 58999999875433222111100000 0000122222345556799999998
Q ss_pred EEeC-CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceeeeeeecccc
Q 022019 143 STTR-DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKE 219 (304)
Q Consensus 143 ~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 219 (304)
+..- --.|.+|++..|.....-...- ........|.|+|++++.+ +. -+++|.+|........+..++.+.....
T Consensus 161 v~DLG~Dri~~y~~~dg~L~~~~~~~v--~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~ 238 (346)
T COG2706 161 VPDLGTDRIFLYDLDDGKLTPADPAEV--KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPE 238 (346)
T ss_pred EeecCCceEEEEEcccCcccccccccc--CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCcc
Confidence 8853 2359999999876543322211 2223667899999999999 56 8999999999876566666665544333
Q ss_pred cc--ccceeEEEeecCCCcEEEEEec-CCeEEEEecCC--ce--EeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 220 GQ--AGIMSAIAFSPTHTGMLAIGSY-SQTSAIYREDN--ME--LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 220 ~~--~~~v~~~~~~p~~~~~l~~~~~-dg~i~i~d~~~--~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
.. .....++..+| ++++|.++.. ...|.+|.+.. ++ .+.....+...-+...|+|.|++|++++.++..|.+
T Consensus 239 dF~g~~~~aaIhis~-dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~v 317 (346)
T COG2706 239 DFTGTNWAAAIHISP-DGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITV 317 (346)
T ss_pred ccCCCCceeEEEECC-CCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEE
Confidence 22 23466788999 6666665543 45788887754 32 222333445556899999999999999977778999
Q ss_pred Eeccc
Q 022019 293 WDLRK 297 (304)
Q Consensus 293 wd~~~ 297 (304)
|....
T Consensus 318 f~~d~ 322 (346)
T COG2706 318 FERDK 322 (346)
T ss_pred EEEcC
Confidence 97754
No 241
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.51 E-value=9.5e-14 Score=111.42 Aligned_cols=172 Identities=20% Similarity=0.259 Sum_probs=124.4
Q ss_pred EEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCC--CcEEEEE
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT--GTKIFAG 191 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~--~~~l~~~ 191 (304)
.+.+|.+.|.++.| +.+|.+|++|++|-.+.|||....+++..+.. +|...|.++.|-|. ++.+++|
T Consensus 45 eL~GH~GCVN~LeW-------n~dG~lL~SGSDD~r~ivWd~~~~KllhsI~T----gHtaNIFsvKFvP~tnnriv~sg 113 (758)
T KOG1310|consen 45 ELTGHTGCVNCLEW-------NADGELLASGSDDTRLIVWDPFEYKLLHSIST----GHTANIFSVKFVPYTNNRIVLSG 113 (758)
T ss_pred hhccccceecceee-------cCCCCEEeecCCcceEEeecchhcceeeeeec----ccccceeEEeeeccCCCeEEEec
Confidence 34567788999999 77999999999999999999987777766643 45558999999993 4555566
Q ss_pred -cCCeEEEEEcCCCCcccee--eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceE-------eEEe
Q 022019 192 -YNKSVRVFDVHRPGRDFEK--YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL-------LYVL 261 (304)
Q Consensus 192 -~d~~i~v~d~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~-------~~~~ 261 (304)
.|..|++||+......... ......-...|...|..++-.|.+...+.++++||+|+-||++.... ...+
T Consensus 114 AgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l 193 (758)
T KOG1310|consen 114 AGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSIL 193 (758)
T ss_pred cCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHH
Confidence 9999999999852211100 01111112456777888999997779999999999999999986321 1111
Q ss_pred ---ccccCCeEEEEECCCCc-EEEEeeccCCeEEEEeccc
Q 022019 262 ---HGQEGGVTHVQFSRDGN-YLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 262 ---~~~~~~v~~~~~~~~~~-~l~~~~~~d~~i~vwd~~~ 297 (304)
...--...++..+|... +|+.|+ .|-..++||.+.
T Consensus 194 ~ny~~~lielk~ltisp~rp~~laVGg-sdpfarLYD~Rr 232 (758)
T KOG1310|consen 194 VNYNPQLIELKCLTISPSRPYYLAVGG-SDPFARLYDRRR 232 (758)
T ss_pred HHhchhhheeeeeeecCCCCceEEecC-CCchhhhhhhhh
Confidence 11123578899999765 577777 999999999654
No 242
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.50 E-value=1.2e-12 Score=99.37 Aligned_cols=237 Identities=15% Similarity=0.195 Sum_probs=141.9
Q ss_pred CCceeEEEEcCCCC--eEEEecCCCeEEEeeCCCCCCccccccccc--cccCCccc-eEEEeecCC-------eE--EEE
Q 022019 60 NNFLKGIKWSPDGS--SFLTSSEDKTLRIFSLPENGISYDVNACSL--AKDQDSYE-ASLVVTEGE-------SV--YDF 125 (304)
Q Consensus 60 ~~~V~~i~~s~~~~--~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~-------~v--~~~ 125 (304)
...|..|.|.+++. .++..+.|.+|++|.+.............. ........ ......+.. .+ ...
T Consensus 84 eEKinkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaH 163 (433)
T KOG1354|consen 84 EEKINKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAH 163 (433)
T ss_pred hhhhhhceecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccc
Confidence 45688999998654 677788999999999876544321110000 00000000 000011110 01 112
Q ss_pred eecCccceeCCCccEEEEEeCCCCEEEEEcCCCee---eEEeecccccccccceEEEEECCCC-cEEE-EEcCCeEEEEE
Q 022019 126 CWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLL---RCTYRAYDAVDEITAAFSVAFNPTG-TKIF-AGYNKSVRVFD 200 (304)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~-~~~d~~i~v~d 200 (304)
.++...++++.|+..++++. |-.|.+|+++--.. +.-++.+....-..-|++..|+|.. +.++ ++..|+|++.|
T Consensus 164 tyhiNSIS~NsD~Et~lSAD-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcD 242 (433)
T KOG1354|consen 164 TYHINSISVNSDKETFLSAD-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCD 242 (433)
T ss_pred eeEeeeeeecCccceEeecc-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEee
Confidence 33344456688888888874 66799999873221 1122222221223367899999965 3444 66999999999
Q ss_pred cCCCCccceeeeeeec--------cccccccceeEEEeecCCCcEEEEEecCCeEEEEec-CCceEeEEeccccC-----
Q 022019 201 VHRPGRDFEKYSTLKG--------NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE-DNMELLYVLHGQEG----- 266 (304)
Q Consensus 201 ~~~~~~~~~~~~~~~~--------~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~-~~~~~~~~~~~~~~----- 266 (304)
+|...-+...-..+.. .+...-..|..+.|++ .|+++++-.. -+|++||+ ...+++.++..|..
T Consensus 243 mR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~-sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kL 320 (433)
T KOG1354|consen 243 MRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSH-SGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKL 320 (433)
T ss_pred chhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEcc-CCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHH
Confidence 9853211111011100 0111223488899999 7778876544 68999999 45677777776642
Q ss_pred -------C---eEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 267 -------G---VTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 267 -------~---v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
. -..++|+-++.+++||+ ..+..+++++..|..
T Consensus 321 c~lYEnD~IfdKFec~~sg~~~~v~TGs-y~n~frvf~~~~gsk 363 (433)
T KOG1354|consen 321 CSLYENDAIFDKFECSWSGNDSYVMTGS-YNNVFRVFNLARGSK 363 (433)
T ss_pred HHHhhccchhheeEEEEcCCcceEeccc-ccceEEEecCCCCcc
Confidence 2 25588999999999999 999999999766643
No 243
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.50 E-value=7.8e-11 Score=95.61 Aligned_cols=212 Identities=19% Similarity=0.243 Sum_probs=134.7
Q ss_pred CceeEEEEcCCCCeEEEecC----CCeEEEeeCCCCC-CccccccccccccCCccceEEEeecCCeEEEEeecCccceeC
Q 022019 61 NFLKGIKWSPDGSSFLTSSE----DKTLRIFSLPENG-ISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~~----dg~v~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 135 (304)
....-++++|++++|.++.. +|.|..|++.... .... + ..+....-.|..++++
T Consensus 37 ~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~----------------~-----~~~~~~g~~p~~i~~~ 95 (345)
T PF10282_consen 37 ENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTL----------------L-----NSVPSGGSSPCHIAVD 95 (345)
T ss_dssp SSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEE----------------E-----EEEEESSSCEEEEEEC
T ss_pred CCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEE----------------e-----eeeccCCCCcEEEEEe
Confidence 34567899999999888765 5789999876431 1000 0 0111111223344568
Q ss_pred CCccEEEEEe-CCCCEEEEEcCC-CeeeEEeecc--------cccccccceEEEEECCCCcEEEEE--cCCeEEEEEcCC
Q 022019 136 PTSCVFASTT-RDHPIHLWDATT-GLLRCTYRAY--------DAVDEITAAFSVAFNPTGTKIFAG--YNKSVRVFDVHR 203 (304)
Q Consensus 136 ~~~~~l~~~~-~dg~i~i~d~~~-~~~~~~~~~~--------~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~v~d~~~ 203 (304)
|++++|+++. .+|.|.++++.. +......... ..........++.|+|+++++++. ....|.+|++..
T Consensus 96 ~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~ 175 (345)
T PF10282_consen 96 PDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDD 175 (345)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-T
T ss_pred cCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeC
Confidence 9999988887 489999999986 4433321111 001123357799999999999854 677899999987
Q ss_pred CCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC--Cce--EeEEeccc------cCCeEEEEE
Q 022019 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED--NME--LLYVLHGQ------EGGVTHVQF 273 (304)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~--~~~--~~~~~~~~------~~~v~~~~~ 273 (304)
....+.....+. .......+.++|+|++..++++...++.|.+|++. .+. .+..+... ......+.+
T Consensus 176 ~~~~l~~~~~~~---~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~i 252 (345)
T PF10282_consen 176 DTGKLTPVDSIK---VPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAI 252 (345)
T ss_dssp TS-TEEEEEEEE---CSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE
T ss_pred CCceEEEeeccc---cccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEE
Confidence 543333322221 22344578999999555556666678899999987 332 33333311 125788999
Q ss_pred CCCCcEEEEeeccCCeEEEEecc
Q 022019 274 SRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 274 ~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
+|||++|+++.+.++.|.+|++.
T Consensus 253 spdg~~lyvsnr~~~sI~vf~~d 275 (345)
T PF10282_consen 253 SPDGRFLYVSNRGSNSISVFDLD 275 (345)
T ss_dssp -TTSSEEEEEECTTTEEEEEEEC
T ss_pred ecCCCEEEEEeccCCEEEEEEEe
Confidence 99999999998788999999993
No 244
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.49 E-value=1.1e-11 Score=103.88 Aligned_cols=159 Identities=16% Similarity=0.156 Sum_probs=101.3
Q ss_pred cCCeEEEEeecCccceeCCCccEEEEEeCC---CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-E-Ec
Q 022019 118 EGESVYDFCWFPHMSASDPTSCVFASTTRD---HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-A-GY 192 (304)
Q Consensus 118 ~~~~v~~~~~~~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~-~~ 192 (304)
+...+....| +|+|+.|+.++.+ ..|++||+.+++....... .. ...++.|+|+|+.++ + +.
T Consensus 202 ~~~~v~~p~w-------SpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~-~g-----~~~~~~~SpDG~~l~~~~s~ 268 (433)
T PRK04922 202 SAEPILSPAW-------SPDGKKLAYVSFERGRSAIYVQDLATGQRELVASF-RG-----INGAPSFSPDGRRLALTLSR 268 (433)
T ss_pred CCCccccccC-------CCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccC-CC-----CccCceECCCCCEEEEEEeC
Confidence 3445666666 8899998887743 3699999988765432221 11 344789999999887 3 34
Q ss_pred CC--eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEe-cCCe--EEEEecCCceEeEEeccccCC
Q 022019 193 NK--SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQT--SAIYREDNMELLYVLHGQEGG 267 (304)
Q Consensus 193 d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~dg~--i~i~d~~~~~~~~~~~~~~~~ 267 (304)
++ .|++||+..+. . ..+ ..+.......+|+|+ +..|+.++ .+|. |+++|+.+++.. .+..+...
T Consensus 269 ~g~~~Iy~~d~~~g~--~---~~l----t~~~~~~~~~~~spD-G~~l~f~sd~~g~~~iy~~dl~~g~~~-~lt~~g~~ 337 (433)
T PRK04922 269 DGNPEIYVMDLGSRQ--L---TRL----TNHFGIDTEPTWAPD-GKSIYFTSDRGGRPQIYRVAASGGSAE-RLTFQGNY 337 (433)
T ss_pred CCCceEEEEECCCCC--e---EEC----ccCCCCccceEECCC-CCEEEEEECCCCCceEEEEECCCCCeE-EeecCCCC
Confidence 44 69999987632 1 111 222333567899995 55555444 4554 666777665532 23223344
Q ss_pred eEEEEECCCCcEEEEeeccCC--eEEEEeccccee
Q 022019 268 VTHVQFSRDGNYLYTGGRKDP--YILCWDLRKAVQ 300 (304)
Q Consensus 268 v~~~~~~~~~~~l~~~~~~d~--~i~vwd~~~~~~ 300 (304)
...++|+|||++|+..+..++ .|.+||+.+++.
T Consensus 338 ~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~ 372 (433)
T PRK04922 338 NARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSV 372 (433)
T ss_pred ccCEEECCCCCEEEEEECCCCceeEEEEECCCCCe
Confidence 557899999999987762332 699999987653
No 245
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.48 E-value=2.1e-11 Score=106.71 Aligned_cols=252 Identities=14% Similarity=0.145 Sum_probs=156.5
Q ss_pred hhcHHhhccccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccc
Q 022019 20 EVTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVN 99 (304)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~ 99 (304)
.+..+++.|+..+.|+...-.-.. ...+...++..-.+.+.++...+.++.+|.++.||.|++.+++.........
T Consensus 1062 s~FvsgS~DGtVKvW~~~k~~~~~----~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~ 1137 (1431)
T KOG1240|consen 1062 SLFVSGSDDGTVKVWNLRKLEGEG----GSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVA 1137 (1431)
T ss_pred ceEEEecCCceEEEeeehhhhcCc----ceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEcccccccccee
Confidence 455666777777777542222111 1122223444567889999999999999999999999999987531110000
Q ss_pred cccccccCCccceEEEeecCCeEEEE-eecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEE
Q 022019 100 ACSLAKDQDSYEASLVVTEGESVYDF-CWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFS 178 (304)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~ 178 (304)
... ........+.+.++ ++.. ......++.+..-+.|..||+++......++.... .+.|++
T Consensus 1138 ~~~---------ri~n~~~~g~vv~m~a~~~-----~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~---hG~vTS 1200 (1431)
T KOG1240|consen 1138 TQV---------RIPNLKKDGVVVSMHAFTA-----IVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLR---HGLVTS 1200 (1431)
T ss_pred eee---------ecccccCCCceEEeecccc-----cccceeEEEEEeccceEEecchhhhhHHhhhcCcc---ccceeE
Confidence 000 00001111222222 2211 11123678888889999999988766555543322 228999
Q ss_pred EEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCC--cEEEE-Ee-cCCeEEEEecC
Q 022019 179 VAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHT--GMLAI-GS-YSQTSAIYRED 253 (304)
Q Consensus 179 i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~--~~l~~-~~-~dg~i~i~d~~ 253 (304)
++.+|.+..++.| ..|.+.+||+|-.. .......++..+++.+..+|..+ ...++ ++ ..+.|.+|++.
T Consensus 1201 i~idp~~~WlviGts~G~l~lWDLRF~~-------~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~ 1273 (1431)
T KOG1240|consen 1201 IVIDPWCNWLVIGTSRGQLVLWDLRFRV-------PILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNME 1273 (1431)
T ss_pred EEecCCceEEEEecCCceEEEEEeecCc-------eeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecc
Confidence 9999999999988 88999999998731 11111234456788888877544 34444 44 57889999999
Q ss_pred CceEeEEeccc-------------------cCCeEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 254 NMELLYVLHGQ-------------------EGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 254 ~~~~~~~~~~~-------------------~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
++.+...+... .-......+..-+..+++|+ .|..|+.||....+.
T Consensus 1274 ~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltgg-sd~kIR~wD~~~p~~ 1338 (1431)
T KOG1240|consen 1274 TGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGG-SDMKIRKWDPTRPEI 1338 (1431)
T ss_pred cCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecC-CccceeeccCCCccc
Confidence 88766555422 11122334444567889999 999999999987654
No 246
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.47 E-value=4.3e-11 Score=100.35 Aligned_cols=158 Identities=15% Similarity=0.149 Sum_probs=103.3
Q ss_pred ecCCeEEEEeecCccceeCCCccEEEEEeC---CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-
Q 022019 117 TEGESVYDFCWFPHMSASDPTSCVFASTTR---DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG- 191 (304)
Q Consensus 117 ~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~- 191 (304)
.+...+....| +|||+.|+..+. +..|++||+.+++... +..... .+....|+|||+.|+ +.
T Consensus 199 ~~~~~v~~p~w-------SpDG~~lay~s~~~g~~~i~~~dl~~g~~~~-l~~~~g-----~~~~~~~SPDG~~la~~~~ 265 (435)
T PRK05137 199 DGSSLVLTPRF-------SPNRQEITYMSYANGRPRVYLLDLETGQREL-VGNFPG-----MTFAPRFSPDGRKVVMSLS 265 (435)
T ss_pred cCCCCeEeeEE-------CCCCCEEEEEEecCCCCEEEEEECCCCcEEE-eecCCC-----cccCcEECCCCCEEEEEEe
Confidence 34456777777 889998888764 4679999998886543 222221 556889999999887 43
Q ss_pred cCC--eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEe-cCC--eEEEEecCCceEeEEeccccC
Q 022019 192 YNK--SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQ--TSAIYREDNMELLYVLHGQEG 266 (304)
Q Consensus 192 ~d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~dg--~i~i~d~~~~~~~~~~~~~~~ 266 (304)
.++ .|++||+..+. . ..+ ..+........|+|+ +..|+..+ .+| .|+++|+..++. ..+..+..
T Consensus 266 ~~g~~~Iy~~d~~~~~--~---~~L----t~~~~~~~~~~~spD-G~~i~f~s~~~g~~~Iy~~d~~g~~~-~~lt~~~~ 334 (435)
T PRK05137 266 QGGNTDIYTMDLRSGT--T---TRL----TDSPAIDTSPSYSPD-GSQIVFESDRSGSPQLYVMNADGSNP-RRISFGGG 334 (435)
T ss_pred cCCCceEEEEECCCCc--e---EEc----cCCCCccCceeEcCC-CCEEEEEECCCCCCeEEEEECCCCCe-EEeecCCC
Confidence 454 47777886531 1 111 223344567899995 55555544 344 588888876544 33433455
Q ss_pred CeEEEEECCCCcEEEEeeccC--CeEEEEecccc
Q 022019 267 GVTHVQFSRDGNYLYTGGRKD--PYILCWDLRKA 298 (304)
Q Consensus 267 ~v~~~~~~~~~~~l~~~~~~d--~~i~vwd~~~~ 298 (304)
.+....|+|||++|+..+... ..|.+||+..+
T Consensus 335 ~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~ 368 (435)
T PRK05137 335 RYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGS 368 (435)
T ss_pred cccCeEECCCCCEEEEEEcCCCceEEEEEECCCC
Confidence 667789999999998776222 36888887554
No 247
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.46 E-value=6.2e-11 Score=98.93 Aligned_cols=158 Identities=15% Similarity=0.126 Sum_probs=101.2
Q ss_pred cCCeEEEEeecCccceeCCCccEEEEEeC---CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-c
Q 022019 118 EGESVYDFCWFPHMSASDPTSCVFASTTR---DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-Y 192 (304)
Q Consensus 118 ~~~~v~~~~~~~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~ 192 (304)
+...+...+| +|||+.|+..+. +..|++|++.+++......... .+..+.|+|||+.|+ +. .
T Consensus 197 ~~~~~~~p~w-------SPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~------~~~~~~~SPDG~~La~~~~~ 263 (429)
T PRK03629 197 SPQPLMSPAW-------SPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPR------HNGAPAFSPDGSKLAFALSK 263 (429)
T ss_pred CCCceeeeEE-------cCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCC------CcCCeEECCCCCEEEEEEcC
Confidence 3456667777 889998887643 3469999998876543322221 344689999999888 43 4
Q ss_pred CC--eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEec-CCe--EEEEecCCceEeEEeccccCC
Q 022019 193 NK--SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY-SQT--SAIYREDNMELLYVLHGQEGG 267 (304)
Q Consensus 193 d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~-dg~--i~i~d~~~~~~~~~~~~~~~~ 267 (304)
++ .|++||+..+. . ..+ ..+...+....|+| ++..|+..+. ++. |+++|+.++.. ..+..+...
T Consensus 264 ~g~~~I~~~d~~tg~--~---~~l----t~~~~~~~~~~wSP-DG~~I~f~s~~~g~~~Iy~~d~~~g~~-~~lt~~~~~ 332 (429)
T PRK03629 264 TGSLNLYVMDLASGQ--I---RQV----TDGRSNNTEPTWFP-DSQNLAYTSDQAGRPQVYKVNINGGAP-QRITWEGSQ 332 (429)
T ss_pred CCCcEEEEEECCCCC--E---EEc----cCCCCCcCceEECC-CCCEEEEEeCCCCCceEEEEECCCCCe-EEeecCCCC
Confidence 44 58889987531 1 111 11223467899999 5555555544 444 55556665543 334334445
Q ss_pred eEEEEECCCCcEEEEeeccC--CeEEEEecccce
Q 022019 268 VTHVQFSRDGNYLYTGGRKD--PYILCWDLRKAV 299 (304)
Q Consensus 268 v~~~~~~~~~~~l~~~~~~d--~~i~vwd~~~~~ 299 (304)
.....|+|||++|+..+..+ ..|.+||+.+++
T Consensus 333 ~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~ 366 (429)
T PRK03629 333 NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 366 (429)
T ss_pred ccCEEECCCCCEEEEEEccCCCceEEEEECCCCC
Confidence 66789999999998776233 358889988775
No 248
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.46 E-value=4e-11 Score=90.84 Aligned_cols=74 Identities=15% Similarity=0.133 Sum_probs=57.6
Q ss_pred ceeEEEeecCCCcEEEEEecC--CeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 224 IMSAIAFSPTHTGMLAIGSYS--QTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 224 ~v~~~~~~p~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
.+.-++|++ +..++++-.+. +.+.+||+++.+....+. ...+|....|+|....|+.+. ....+++|...-...
T Consensus 320 g~g~lafs~-Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi-Qk~piraf~WdP~~prL~vct-g~srLY~W~psg~~~ 395 (447)
T KOG4497|consen 320 GAGKLAFSC-DSTYAATRNDKYPNALWLWDLQNLKLHAVLI-QKHPIRAFEWDPGRPRLVVCT-GKSRLYFWAPSGPRV 395 (447)
T ss_pred ccceeeecC-CceEEeeecCCCCceEEEEechhhhhhhhhh-hccceeEEEeCCCCceEEEEc-CCceEEEEcCCCceE
Confidence 467799999 77777776543 569999998877655554 467899999999998888777 677899998765443
No 249
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=99.45 E-value=9.6e-11 Score=94.61 Aligned_cols=202 Identities=19% Similarity=0.312 Sum_probs=129.3
Q ss_pred cCCCCceeEEEEcCCCC--eEEE-----ecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecC
Q 022019 57 SIPNNFLKGIKWSPDGS--SFLT-----SSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP 129 (304)
Q Consensus 57 ~~h~~~V~~i~~s~~~~--~l~s-----~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 129 (304)
.-|...|+.+.+||.+. .+|+ .|.-+.|+||............... +.. ..-..+.|++
T Consensus 162 kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ks-------------FFk-adkvqm~WN~ 227 (566)
T KOG2315|consen 162 KLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKS-------------FFK-ADKVQMKWNK 227 (566)
T ss_pred eeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhcc-------------ccc-cceeEEEecc
Confidence 34677899999999643 4443 3556789999876333221111110 001 1223455644
Q ss_pred ccceeCCCccEEEEEeCC---------CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE--E-cCCeEE
Q 022019 130 HMSASDPTSCVFASTTRD---------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA--G-YNKSVR 197 (304)
Q Consensus 130 ~~~~~~~~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~--~-~d~~i~ 197 (304)
...++ -.|++..-| .++++.++........+... ++|.++.|+|+++.+++ | .-..+.
T Consensus 228 ~gt~L----LvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~------GPVhdv~W~~s~~EF~VvyGfMPAkvt 297 (566)
T KOG2315|consen 228 LGTAL----LVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKE------GPVHDVTWSPSGREFAVVYGFMPAKVT 297 (566)
T ss_pred CCceE----EEEEEEeecCCCccccccceEEEEEecCceEEEecCCC------CCceEEEECCCCCEEEEEEecccceEE
Confidence 32111 012222223 35778887733333333222 29999999999988883 6 778999
Q ss_pred EEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEec---CCeEEEEecCCceEeEEeccccCCeEEEEEC
Q 022019 198 VFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY---SQTSAIYREDNMELLYVLHGQEGGVTHVQFS 274 (304)
Q Consensus 198 v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 274 (304)
|||++.. .+. .-..++-.++-|+| .+++|+.++- -|.+.|||..+.+++..+.... -+-+.|+
T Consensus 298 ifnlr~~--------~v~---df~egpRN~~~fnp-~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~--tt~~eW~ 363 (566)
T KOG2315|consen 298 IFNLRGK--------PVF---DFPEGPRNTAFFNP-HGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN--TTVFEWS 363 (566)
T ss_pred EEcCCCC--------EeE---eCCCCCccceEECC-CCCEEEEeecCCCCCceEEEeccchhhccccccCC--ceEEEEc
Confidence 9999852 111 12345567899999 6667776665 3789999999999998887543 4668999
Q ss_pred CCCcEEEEee-----ccCCeEEEEecc
Q 022019 275 RDGNYLYTGG-----RKDPYILCWDLR 296 (304)
Q Consensus 275 ~~~~~l~~~~-----~~d~~i~vwd~~ 296 (304)
|||.+++|+. +-|+.++||+..
T Consensus 364 PdGe~flTATTaPRlrvdNg~Kiwhyt 390 (566)
T KOG2315|consen 364 PDGEYFLTATTAPRLRVDNGIKIWHYT 390 (566)
T ss_pred CCCcEEEEEeccccEEecCCeEEEEec
Confidence 9999999987 247889999984
No 250
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.43 E-value=8.5e-13 Score=119.11 Aligned_cols=194 Identities=18% Similarity=0.281 Sum_probs=145.2
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
..+.|-..|.++.=+|...+.+||+.||.|++|....+.. +..........|+.+.|
T Consensus 2203 ~~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~----------------v~~~rt~g~s~vtr~~f------- 2259 (2439)
T KOG1064|consen 2203 MIKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQ----------------VVCFRTAGNSRVTRSRF------- 2259 (2439)
T ss_pred EeecccCceeeecCCCCCceEEecCCCceEEEEeccCCCe----------------EEEeeccCcchhhhhhh-------
Confidence 3445667788888889888999999999999998864322 22222233345555544
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE---cCCeEEEEEcCCCCcccee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG---YNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~---~d~~i~v~d~~~~~~~~~~ 210 (304)
+.+|+.+..+..||.+.+|... .++....+.|.. ....+.|-. ..++ +| .++.+.+||...+....-
T Consensus 2260 ~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk-----~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~- 2330 (2439)
T KOG1064|consen 2260 NHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNK-----ALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSL- 2330 (2439)
T ss_pred cccCCceeeeccCCceeecccC-CcceeccccCCc-----cccceeeee--hhhhccccCCCCCcccchhcccCcccce-
Confidence 7789999999999999999986 445555555554 556677765 4555 33 678999999876432211
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeE
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYI 290 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i 290 (304)
.. ..|.+.++++++-| ...+|++|+.+|.|++||++..++++++.. ++ ...++++|+ ..|.|
T Consensus 2331 ----v~--~~H~~gaT~l~~~P-~~qllisggr~G~v~l~D~rqrql~h~~~~---------~~-~~~~f~~~s-s~g~i 2392 (2439)
T KOG1064|consen 2331 ----VH--TCHDGGATVLAYAP-KHQLLISGGRKGEVCLFDIRQRQLRHTFQA---------LD-TREYFVTGS-SEGNI 2392 (2439)
T ss_pred ----ee--eecCCCceEEEEcC-cceEEEecCCcCcEEEeehHHHHHHHHhhh---------hh-hhheeeccC-cccce
Confidence 11 67888899999999 888999999999999999999888877764 44 567899999 99999
Q ss_pred EEEecccc
Q 022019 291 LCWDLRKA 298 (304)
Q Consensus 291 ~vwd~~~~ 298 (304)
+||++...
T Consensus 2393 kIw~~s~~ 2400 (2439)
T KOG1064|consen 2393 KIWRLSEF 2400 (2439)
T ss_pred EEEEcccc
Confidence 99999876
No 251
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.40 E-value=5.4e-10 Score=84.31 Aligned_cols=176 Identities=19% Similarity=0.267 Sum_probs=110.8
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCC-CccccccccccccCCccceE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENG-ISYDVNACSLAKDQDSYEAS 113 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~ 113 (304)
.++.||-...+... .+ .-..+|.++.+.++ .+++.- .+.|.||...++. ....+....
T Consensus 76 kviIWDD~k~~~i~------el-~f~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et~~----------- 134 (346)
T KOG2111|consen 76 KVIIWDDLKERCII------EL-SFNSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIETRS----------- 134 (346)
T ss_pred eEEEEecccCcEEE------EE-EeccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeeccc-----------
Confidence 56788844443332 22 24667999999765 455443 5689999987432 111111110
Q ss_pred EEeecCCeEEEEeecCccceeCCCccEEEE-EeCCCCEEEEEcCCCee--eEEeecccccccccceEEEEECCCCcEEEE
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPTSCVFAS-TTRDHPIHLWDATTGLL--RCTYRAYDAVDEITAAFSVAFNPTGTKIFA 190 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~ 190 (304)
....+.++ .| ..+..+||. |-.-|.|.|-|+...+. ...+..|.. .|.+++.+-+|..+|+
T Consensus 135 ----NPkGlC~~--~~-----~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s-----~Iacv~Ln~~Gt~vAT 198 (346)
T KOG2111|consen 135 ----NPKGLCSL--CP-----TSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDS-----DIACVALNLQGTLVAT 198 (346)
T ss_pred ----CCCceEee--cC-----CCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccC-----ceeEEEEcCCccEEEE
Confidence 01112222 11 112223333 33568999999986655 355565554 9999999999999995
Q ss_pred E-cCCe-EEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC
Q 022019 191 G-YNKS-VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN 254 (304)
Q Consensus 191 ~-~d~~-i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~ 254 (304)
+ ..|+ |+|||..++.. +..+.. ......|.+++|+| +..+|+++|+.|+++||.++.
T Consensus 199 aStkGTLIRIFdt~~g~~----l~E~RR--G~d~A~iy~iaFSp-~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 199 ASTKGTLIRIFDTEDGTL----LQELRR--GVDRADIYCIAFSP-NSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred eccCcEEEEEEEcCCCcE----eeeeec--CCchheEEEEEeCC-CccEEEEEcCCCeEEEEEeec
Confidence 4 5555 89999988532 222221 22345699999999 788999999999999998864
No 252
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.40 E-value=2.1e-10 Score=96.12 Aligned_cols=157 Identities=20% Similarity=0.227 Sum_probs=102.6
Q ss_pred cCCeEEEEeecCccceeCCCccEEEEEeCC---CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-c
Q 022019 118 EGESVYDFCWFPHMSASDPTSCVFASTTRD---HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-Y 192 (304)
Q Consensus 118 ~~~~v~~~~~~~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~ 192 (304)
++..+....| +|+|++|+.+..+ ..|++||+.+++....... .. .+.++.|+|+|+.|+ +. .
T Consensus 188 ~~~~~~~p~~-------Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~-~~-----~~~~~~~spDg~~l~~~~~~ 254 (417)
T TIGR02800 188 SREPILSPAW-------SPDGQKLAYVSFESGKPEIYVQDLATGQREKVASF-PG-----MNGAPAFSPDGSKLAVSLSK 254 (417)
T ss_pred CCCceecccC-------CCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecC-CC-----CccceEECCCCCEEEEEECC
Confidence 3344555555 8899999887654 4799999988765433222 11 456789999998877 43 3
Q ss_pred CC--eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEe-cCC--eEEEEecCCceEeEEeccccCC
Q 022019 193 NK--SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQ--TSAIYREDNMELLYVLHGQEGG 267 (304)
Q Consensus 193 d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~dg--~i~i~d~~~~~~~~~~~~~~~~ 267 (304)
++ .|++||+..+. . ..+ ..+........|+| ++..|+..+ .++ .|+++|+.+++.. .+..+...
T Consensus 255 ~~~~~i~~~d~~~~~--~---~~l----~~~~~~~~~~~~s~-dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~~ 323 (417)
T TIGR02800 255 DGNPDIYVMDLDGKQ--L---TRL----TNGPGIDTEPSWSP-DGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGGY 323 (417)
T ss_pred CCCccEEEEECCCCC--E---EEC----CCCCCCCCCEEECC-CCCEEEEEECCCCCceEEEEECCCCCEE-EeecCCCC
Confidence 33 58888887531 1 111 11223345678999 455554444 344 5788888766543 44445566
Q ss_pred eEEEEECCCCcEEEEeeccCC---eEEEEecccce
Q 022019 268 VTHVQFSRDGNYLYTGGRKDP---YILCWDLRKAV 299 (304)
Q Consensus 268 v~~~~~~~~~~~l~~~~~~d~---~i~vwd~~~~~ 299 (304)
+..+.|+|+|++|+.++ .++ .|.+||+.++.
T Consensus 324 ~~~~~~spdg~~i~~~~-~~~~~~~i~~~d~~~~~ 357 (417)
T TIGR02800 324 NASPSWSPDGDLIAFVH-REGGGFNIAVMDLDGGG 357 (417)
T ss_pred ccCeEECCCCCEEEEEE-ccCCceEEEEEeCCCCC
Confidence 78899999999999888 565 78999987753
No 253
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.39 E-value=8.2e-13 Score=106.59 Aligned_cols=222 Identities=18% Similarity=0.224 Sum_probs=145.5
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
+..+.||...|..++--.+.+.+++++.|++|++|.++...-......+. -....|..+|.++.|.
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQ----------fTY~aHkk~i~~igfL---- 793 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQ----------FTYQAHKKPIHDIGFL---- 793 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceee----------eEhhhccCcccceeee----
Confidence 34678999999999887788899999999999999998543322211121 1344577788887763
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE--EcCCeEEEEEcCCCCcccee
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA--GYNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~--~~d~~i~v~d~~~~~~~~~~ 210 (304)
.+.+++++ .||-|++||.--++...........+....|.++.- -+...+.+ +...+|+++|.+..+-.. .
T Consensus 794 ---~~lr~i~S--cD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~n-v~~~iliAgcsaeSTVKl~DaRsce~~~-E 866 (1034)
T KOG4190|consen 794 ---ADLRSIAS--CDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLEN-VDRHILIAGCSAESTVKLFDARSCEWTC-E 866 (1034)
T ss_pred ---eccceeee--ccCcceeecccccchhHhhhcCcccCCCceeEeccc-Ccchheeeeccchhhheeeeccccccee-e
Confidence 34445554 578899999877776654433322222223444331 12333333 388999999998743211 1
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeE
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYI 290 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i 290 (304)
+.. ....+....+.+++..| .++.++++-.+|+|.+.|.++|+.+..++.-+-....++ .|....|+... .|.++
T Consensus 867 ~kV--cna~~Pna~~R~iaVa~-~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqla-apsdq~L~~sa-ldHsl 941 (1034)
T KOG4190|consen 867 LKV--CNAPGPNALTRAIAVAD-KGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLA-APSDQALAQSA-LDHSL 941 (1034)
T ss_pred EEe--ccCCCCchheeEEEecc-CcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhc-CchhHHHHhhc-cccee
Confidence 111 11234456688999999 788999999999999999999999988875544444444 34555666666 67777
Q ss_pred EE-Eeccccee
Q 022019 291 LC-WDLRKAVQ 300 (304)
Q Consensus 291 ~v-wd~~~~~~ 300 (304)
.+ |..-+|..
T Consensus 942 aVnWhaldgim 952 (1034)
T KOG4190|consen 942 AVNWHALDGIM 952 (1034)
T ss_pred EeeehhcCCee
Confidence 77 76655543
No 254
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=99.37 E-value=3.8e-10 Score=83.29 Aligned_cols=204 Identities=14% Similarity=0.101 Sum_probs=131.4
Q ss_pred eEEEEcC-----CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 64 KGIKWSP-----DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 64 ~~i~~s~-----~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
..|.|-| ...+||.|+..|...+|...+++.....- ..+...|.-+ ... .-..
T Consensus 71 ~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~c----------------d~snn~v~~~---~r~---cd~~ 128 (344)
T KOG4532|consen 71 TGMTFTPGSFINKCVTLADGGASGQFDLFACNTNDGHLYQC----------------DVSNNDVTLV---KRY---CDLK 128 (344)
T ss_pred ecccccchHhhccccEEEeccccceeeeecccCcccceeee----------------cccccchhhh---hhh---cccc
Confidence 4566666 33589999999999999988654321110 0011111100 000 0011
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCCccceeeeeeecc
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGN 217 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 217 (304)
.-+..++.|.++++.+++.+........... .+.++++++++++++ +|....|..|.+...+.....+..
T Consensus 129 ~~~~i~sndht~k~~~~~~~s~~~~~h~~~~-----~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~---- 199 (344)
T KOG4532|consen 129 FPLNIASNDHTGKTMVVSGDSNKFAVHNQNL-----TQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYE---- 199 (344)
T ss_pred cceeeccCCcceeEEEEecCcccceeecccc-----ceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEe----
Confidence 2366778888899988876544333332211 478999999999999 678899999999875443332111
Q ss_pred ccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceE-eEEe----ccccCCeEEEEECCCCcE--EEEeeccCCeE
Q 022019 218 KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL-LYVL----HGQEGGVTHVQFSRDGNY--LYTGGRKDPYI 290 (304)
Q Consensus 218 ~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~----~~~~~~v~~~~~~~~~~~--l~~~~~~d~~i 290 (304)
......--+..|+. ....+|+++.||.+.|||++.... .... ..|.+.+..+.|++-|.. |+..- .=+.+
T Consensus 200 -a~t~D~gF~~S~s~-~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sE-hfs~~ 276 (344)
T KOG4532|consen 200 -APTSDHGFYNSFSE-NDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISE-HFSRV 276 (344)
T ss_pred -cccCCCceeeeecc-CcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEec-CcceE
Confidence 11222245678888 677999999999999999997653 2222 358889999999987642 33333 56789
Q ss_pred EEEecccceee
Q 022019 291 LCWDLRKAVQV 301 (304)
Q Consensus 291 ~vwd~~~~~~~ 301 (304)
.+-|+++++..
T Consensus 277 hv~D~R~~~~~ 287 (344)
T KOG4532|consen 277 HVVDTRNYVNH 287 (344)
T ss_pred EEEEcccCcee
Confidence 99999987643
No 255
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.36 E-value=1.1e-10 Score=100.70 Aligned_cols=220 Identities=14% Similarity=0.104 Sum_probs=142.5
Q ss_pred CceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc----------
Q 022019 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH---------- 130 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------- 130 (304)
+++++.++-. +||+.|. --.+.+||+..+..............+ .............|+...+.+.
T Consensus 8 ~~l~~~~~~~--~~llag~-gp~i~~yd~~s~~li~~~~~~~~~~~H-~~e~~~~l~~~~~v~~~~~~~v~~~~~~~~~~ 83 (967)
T KOG0974|consen 8 GPLNLPQLVS--DYLLAGS-GPEILVYDLSSGCLIRHLIQSKILEVH-RGEGKVKLLSGKIVTCAKSDEVYVKEASNQII 83 (967)
T ss_pred ccccchhhcc--ceeeecC-CCceEEeeCCchhHhhhhhhhcccccc-cccccceeccceEEEEEeecceeecchhhhhh
Confidence 4455555543 5666544 346999999887765444333322222 0000011111112222221110
Q ss_pred --------cceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEc
Q 022019 131 --------MSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDV 201 (304)
Q Consensus 131 --------~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~ 201 (304)
...+.-+...++.+..+..+.+||...+............ .-....-+-++++.-++++| .-+.|.+|+.
T Consensus 84 ~~~s~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~-~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~ 162 (967)
T KOG0974|consen 84 ERFSDWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERC-TLYSSLIIGDSAEELYIASGSVFGEIIVWKP 162 (967)
T ss_pred hhccccccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceE-EEEeEEEEeccCcEEEEEeccccccEEEEec
Confidence 0122335566888888889999999877655444332210 00122334556677778876 8899999999
Q ss_pred CCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeE-EeccccCCeEEEEECCCCcEE
Q 022019 202 HRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLY-VLHGQEGGVTHVQFSRDGNYL 280 (304)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l 280 (304)
.....+ ....+|.+.+.++.|+- ++.++++.|+|.++++|++++.+... ..-+|...|..+.|.|+ .+
T Consensus 163 ~~dn~p--------~~l~GHeG~iF~i~~s~-dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i 231 (967)
T KOG0974|consen 163 HEDNKP--------IRLKGHEGSIFSIVTSL-DGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RI 231 (967)
T ss_pred cccCCc--------ceecccCCceEEEEEcc-CCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--ee
Confidence 732211 13488999999999999 78899999999999999999887655 66689999999999998 89
Q ss_pred EEeeccCCeEEEEeccc
Q 022019 281 YTGGRKDPYILCWDLRK 297 (304)
Q Consensus 281 ~~~~~~d~~i~vwd~~~ 297 (304)
++++ .|.+.++|+...
T Consensus 232 ~t~g-edctcrvW~~~~ 247 (967)
T KOG0974|consen 232 ITVG-EDCTCRVWGVNG 247 (967)
T ss_pred EEec-cceEEEEEeccc
Confidence 9999 999999996543
No 256
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=99.34 E-value=3.3e-11 Score=93.41 Aligned_cols=159 Identities=13% Similarity=0.184 Sum_probs=109.1
Q ss_pred cCccceeCCCccEEEEEeCCCCEEEEEcCCCee----eEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcC
Q 022019 128 FPHMSASDPTSCVFASTTRDHPIHLWDATTGLL----RCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVH 202 (304)
Q Consensus 128 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~ 202 (304)
.+.....++.+++++++..+....++++..... ........ ..+++.|..+.....++ .-|-++-+|+-
T Consensus 64 a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~------~~~ai~~~~~~~sv~v~dkagD~~~~di~ 137 (390)
T KOG3914|consen 64 APALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPK------RPTAISFIREDTSVLVADKAGDVYSFDIL 137 (390)
T ss_pred cccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeeccc------CcceeeeeeccceEEEEeecCCceeeeee
Confidence 334445588999999998888877877764432 22222221 33455665555444432 33444444432
Q ss_pred CCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec-cccCCeEEEEECCCCcEEE
Q 022019 203 RPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH-GQEGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~ 281 (304)
.... .......+|-..++.++|+| ++++|+++..|..|++-.......+..+- ||+.-|..++.-++. .|+
T Consensus 138 s~~~------~~~~~~lGhvSml~dVavS~-D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~-~Ll 209 (390)
T KOG3914|consen 138 SADS------GRCEPILGHVSMLLDVAVSP-DDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNY-LLL 209 (390)
T ss_pred cccc------cCcchhhhhhhhhheeeecC-CCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCc-eee
Confidence 2110 11112267888999999999 67899999999999998887766666664 799999999998654 588
Q ss_pred EeeccCCeEEEEecccceee
Q 022019 282 TGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 282 ~~~~~d~~i~vwd~~~~~~~ 301 (304)
++| .|++|++||+.+|+++
T Consensus 210 S~s-GD~tlr~Wd~~sgk~L 228 (390)
T KOG3914|consen 210 SGS-GDKTLRLWDITSGKLL 228 (390)
T ss_pred ecC-CCCcEEEEecccCCcc
Confidence 888 8999999999999876
No 257
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.34 E-value=7.5e-11 Score=89.79 Aligned_cols=219 Identities=14% Similarity=0.254 Sum_probs=145.5
Q ss_pred ceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 51 NQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
..++.++||.+.|++...-|...-+++.+.|.+++||--.+.. .+-..+......++.++.+
T Consensus 15 ~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~---------------q~wpsI~~~mP~~~~~~~y--- 76 (404)
T KOG1409|consen 15 ELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSG---------------QYWPSIYHYMPSPCSAMEY--- 76 (404)
T ss_pred hhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEecccc---------------ccCchhhhhCCCCceEeee---
Confidence 3455788999999999999988889999999999999543221 1111122223355666665
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcCCe--------------
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKS-------------- 195 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~-------------- 195 (304)
.++...|++|-..|++.-+.+...-....+ ......|...+..+-|+-....++ +|.|..
T Consensus 77 ----~~e~~~L~vg~~ngtvtefs~sedfnkm~~-~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~ 151 (404)
T KOG1409|consen 77 ----VSESRRLYVGQDNGTVTEFALSEDFNKMTF-LKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGG 151 (404)
T ss_pred ----eccceEEEEEEecceEEEEEhhhhhhhcch-hhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccc
Confidence 556778888888898888876532111111 001112223555555554444444 223322
Q ss_pred -------------------------EEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEE
Q 022019 196 -------------------------VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY 250 (304)
Q Consensus 196 -------------------------i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~ 250 (304)
|.+..+... ...+.....+|.+.+++++|.| ...+|++|..|..+.+|
T Consensus 152 Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~------~~~~i~~~~~h~~~~~~l~Wd~-~~~~LfSg~~d~~vi~w 224 (404)
T KOG1409|consen 152 YNFETPASALQFDALYAFVGDHSGQITMLKLEQN------GCQLITTFNGHTGEVTCLKWDP-GQRLLFSGASDHSVIMW 224 (404)
T ss_pred eEeeccCCCCceeeEEEEecccccceEEEEEeec------CCceEEEEcCcccceEEEEEcC-CCcEEEeccccCceEEE
Confidence 211111110 0112234477889999999999 88899999999999999
Q ss_pred ecCCce-EeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 251 REDNME-LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 251 d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
|+...+ ....+.+|...|..+..-+--+.|++++ .||.|.+||++....
T Consensus 225 digg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~-edg~i~~w~mn~~r~ 274 (404)
T KOG1409|consen 225 DIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCG-EDGGIVVWNMNVKRV 274 (404)
T ss_pred eccCCcceeeeeccchhhhhhhhhhhhheeeeecc-CCCeEEEEeccceee
Confidence 997554 5567778999999999888888999999 999999999976543
No 258
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.33 E-value=7.2e-10 Score=92.99 Aligned_cols=158 Identities=14% Similarity=0.129 Sum_probs=96.4
Q ss_pred CCeEEEEeecCccceeCCCccEEEEEeCC-C--CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cC
Q 022019 119 GESVYDFCWFPHMSASDPTSCVFASTTRD-H--PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YN 193 (304)
Q Consensus 119 ~~~v~~~~~~~~~~~~~~~~~~l~~~~~d-g--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d 193 (304)
...+....| +|||+.|+..+.+ + .|++||+.+++......... ......|+|||+.|+ +. .+
T Consensus 217 ~~~~~~p~w-------SPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g------~~~~~~wSPDG~~La~~~~~~ 283 (448)
T PRK04792 217 PEPLMSPAW-------SPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPG------INGAPRFSPDGKKLALVLSKD 283 (448)
T ss_pred CCcccCceE-------CCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCC------CcCCeeECCCCCEEEEEEeCC
Confidence 345555555 8899988876543 3 58899998876543222211 334689999999887 43 55
Q ss_pred Ce--EEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCC--eEEEEecCCceEeEEeccccCCeE
Q 022019 194 KS--VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ--TSAIYREDNMELLYVLHGQEGGVT 269 (304)
Q Consensus 194 ~~--i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~v~ 269 (304)
+. |+++|+..+. . ..+ ..+.......+|+|++..++++...++ .|+++|+.+++... +........
T Consensus 284 g~~~Iy~~dl~tg~--~---~~l----t~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~-Lt~~g~~~~ 353 (448)
T PRK04792 284 GQPEIYVVDIATKA--L---TRI----TRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR-LTFEGEQNL 353 (448)
T ss_pred CCeEEEEEECCCCC--e---EEC----ccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-EecCCCCCc
Confidence 64 7777876531 1 111 122334567899995554545544444 46667777665432 221222345
Q ss_pred EEEECCCCcEEEEeeccCC--eEEEEecccce
Q 022019 270 HVQFSRDGNYLYTGGRKDP--YILCWDLRKAV 299 (304)
Q Consensus 270 ~~~~~~~~~~l~~~~~~d~--~i~vwd~~~~~ 299 (304)
..+|+|||++|+..+..++ .|.++|+.+++
T Consensus 354 ~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~ 385 (448)
T PRK04792 354 GGSITPDGRSMIMVNRTNGKFNIARQDLETGA 385 (448)
T ss_pred CeeECCCCCEEEEEEecCCceEEEEEECCCCC
Confidence 6799999999988763444 45567777664
No 259
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.30 E-value=4.9e-10 Score=83.66 Aligned_cols=187 Identities=17% Similarity=0.257 Sum_probs=123.8
Q ss_pred CCceeEEEEcC---CCC-eEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeC
Q 022019 60 NNFLKGIKWSP---DGS-SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135 (304)
Q Consensus 60 ~~~V~~i~~s~---~~~-~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 135 (304)
...+..|.|.- +|. .++-+..+|.|.++.................. +.. ....++ .++
T Consensus 69 ts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~k--------i~~---~~~lsl-------D~~ 130 (339)
T KOG0280|consen 69 TSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKK--------ISV---VEALSL-------DIS 130 (339)
T ss_pred ccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhh--------hhh---eeeeEE-------Eee
Confidence 44577788864 555 56667788999999776433222211111000 000 011233 346
Q ss_pred CCccEEEEEeCCCCEEEEEcCCCeee--EEeecccccccccceEEEEECCCCc-EEEEE-cCCeEEEEEcCCCCccceee
Q 022019 136 PTSCVFASTTRDHPIHLWDATTGLLR--CTYRAYDAVDEITAAFSVAFNPTGT-KIFAG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 136 ~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
+.+..++++..+|.+.+-+....... +.++.|.. +++...|+.... .+++| .|+.+..||+|.+..
T Consensus 131 ~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~-----E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~----- 200 (339)
T KOG0280|consen 131 TSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEF-----EAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKT----- 200 (339)
T ss_pred ccCceEEEEcCCCcEEEEecceeeeeecccccccce-----eeeeeecccCCCceEEecCCCceEEEEEecCCcc-----
Confidence 67778999999999986665544333 35565554 888889987554 45566 999999999995431
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC-ceEeEEeccccCCeEEEEECCC
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-MELLYVLHGQEGGVTHVQFSRD 276 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~ 276 (304)
.+-....-|...|.++.-+|..+.++++|++|..|++||.++ +++++.-. -.+.|..+.++|.
T Consensus 201 -~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~-v~GGVWRi~~~p~ 264 (339)
T KOG0280|consen 201 -FIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAK-VGGGVWRIKHHPE 264 (339)
T ss_pred -eeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCc-cccceEEEEecch
Confidence 111122457778999999987889999999999999999995 56665554 3478899998884
No 260
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.30 E-value=7.2e-09 Score=79.90 Aligned_cols=214 Identities=13% Similarity=0.184 Sum_probs=137.0
Q ss_pred ecCCCCceeEEEEcCCCCeEEEecC---CCeEEEeeCCCC--CCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 56 SSIPNNFLKGIKWSPDGSSFLTSSE---DKTLRIFSLPEN--GISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 56 ~~~h~~~V~~i~~s~~~~~l~s~~~---dg~v~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
+-.+.+.++-|+|+|++++|.++.. +|.|..|.++.. .+. .++. .... +. .|.
T Consensus 35 ~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt-~ln~-------------~~~~-g~-------~p~ 92 (346)
T COG2706 35 LVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLT-FLNR-------------QTLP-GS-------PPC 92 (346)
T ss_pred hccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEE-Eeec-------------cccC-CC-------CCe
Confidence 3456777899999999999988754 577888877642 210 0000 0000 11 113
Q ss_pred cceeCCCccEEEEEeC-CCCEEEEEcCC-CeeeEE---eecccc----cccccceEEEEECCCCcEEEE-E-cCCeEEEE
Q 022019 131 MSASDPTSCVFASTTR-DHPIHLWDATT-GLLRCT---YRAYDA----VDEITAAFSVAFNPTGTKIFA-G-YNKSVRVF 199 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~-dg~i~i~d~~~-~~~~~~---~~~~~~----~~~~~~v~~i~~~~~~~~l~~-~-~d~~i~v~ 199 (304)
.++++++|++++++.. .|.|.++-+.. |..... ...... ......+....+.|+++++++ . .-..|.+|
T Consensus 93 yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y 172 (346)
T COG2706 93 YVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLY 172 (346)
T ss_pred EEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEE
Confidence 3466899999988865 57899999865 433222 211111 111223778999999999995 4 66789999
Q ss_pred EcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEE-EecCCeEEEEecCCc----eEeEEec------cccCCe
Q 022019 200 DVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAI-GSYSQTSAIYREDNM----ELLYVLH------GQEGGV 268 (304)
Q Consensus 200 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~-~~~dg~i~i~d~~~~----~~~~~~~------~~~~~v 268 (304)
++..+.-....... .......+.|.|+| ++++..+ .--+++|.+|..... +.++.+. ....+.
T Consensus 173 ~~~dg~L~~~~~~~-----v~~G~GPRHi~FHp-n~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~ 246 (346)
T COG2706 173 DLDDGKLTPADPAE-----VKPGAGPRHIVFHP-NGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWA 246 (346)
T ss_pred EcccCccccccccc-----cCCCCCcceEEEcC-CCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCce
Confidence 99853221111111 12334578999999 5555544 555899999988763 2233222 123467
Q ss_pred EEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 269 THVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 269 ~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
..+..+|||++|+++.+....|.+|.+..
T Consensus 247 aaIhis~dGrFLYasNRg~dsI~~f~V~~ 275 (346)
T COG2706 247 AAIHISPDGRFLYASNRGHDSIAVFSVDP 275 (346)
T ss_pred eEEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 88999999999999987778898888765
No 261
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.30 E-value=3.3e-09 Score=97.19 Aligned_cols=227 Identities=13% Similarity=0.179 Sum_probs=134.6
Q ss_pred ceeEEEEcCCCCeEEEec-CCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCC-eEEEEeecCccceeCC-Cc
Q 022019 62 FLKGIKWSPDGSSFLTSS-EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGE-SVYDFCWFPHMSASDP-TS 138 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~-~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~-~~ 138 (304)
...+|++++++..|+.+. ..+.|+++|+.++....-...... ... ...+. .....-..|..++++| ++
T Consensus 625 ~P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~V~tlag~G~~--g~~-------~~gg~~~~~~~ln~P~gVa~dp~~g 695 (1057)
T PLN02919 625 RPQGLAYNAKKNLLYVADTENHALREIDFVNETVRTLAGNGTK--GSD-------YQGGKKGTSQVLNSPWDVCFEPVNE 695 (1057)
T ss_pred CCcEEEEeCCCCEEEEEeCCCceEEEEecCCCEEEEEeccCcc--cCC-------CCCChhhhHhhcCCCeEEEEecCCC
Confidence 357889998887665554 457899999875432110000000 000 00000 0000112344556687 56
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccc----------cccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCc
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDA----------VDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGR 206 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----------~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~ 206 (304)
.++++.+.++.|++||..++... .+..... .........|+++|++..|+ +. .++.|++||+.++..
T Consensus 696 ~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~ 774 (1057)
T PLN02919 696 KVYIAMAGQHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGS 774 (1057)
T ss_pred eEEEEECCCCeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcE
Confidence 67777778899999998876543 2211100 00112456899999998666 43 779999999876432
Q ss_pred cceeeee-----eeccc--------cccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec-c---------
Q 022019 207 DFEKYST-----LKGNK--------EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH-G--------- 263 (304)
Q Consensus 207 ~~~~~~~-----~~~~~--------~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~--------- 263 (304)
....... ..... .........++++| ++.++++-+.++.|++||..++....... +
T Consensus 775 ~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~-dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~ 853 (1057)
T PLN02919 775 RLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAK-DGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKA 853 (1057)
T ss_pred EEEEecccccCcccccccCCCCchhhhhccCCceeeEeC-CCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcc
Confidence 1100000 00000 00111246889999 66788888899999999998776543221 1
Q ss_pred ---ccCCeEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 264 ---QEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 264 ---~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
.-.....++++++|+.+++-+ .+++|++||+++++.
T Consensus 854 ~~a~l~~P~GIavd~dG~lyVaDt-~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 854 LKAQLSEPAGLALGENGRLFVADT-NNSLIRYLDLNKGEA 892 (1057)
T ss_pred cccccCCceEEEEeCCCCEEEEEC-CCCEEEEEECCCCcc
Confidence 112467899999999777777 899999999988754
No 262
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.29 E-value=1.5e-09 Score=91.13 Aligned_cols=161 Identities=14% Similarity=0.118 Sum_probs=101.4
Q ss_pred ecCCeEEEEeecCccceeCCCccEEEEEeCC---CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-
Q 022019 117 TEGESVYDFCWFPHMSASDPTSCVFASTTRD---HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG- 191 (304)
Q Consensus 117 ~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~- 191 (304)
.+...+....| +|+|+.|+..+.+ ..|++||+.+++....... .. .+....|+|+|+.|+ +.
T Consensus 196 ~~~~~~~~p~w-------SpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~-~g-----~~~~~~~SpDG~~la~~~~ 262 (430)
T PRK00178 196 QSREPILSPRW-------SPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNF-EG-----LNGAPAWSPDGSKLAFVLS 262 (430)
T ss_pred cCCCceeeeeE-------CCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCC-CC-----CcCCeEECCCCCEEEEEEc
Confidence 34456666666 8899988877643 3689999988865432221 11 344689999999887 33
Q ss_pred cCC--eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCC--eEEEEecCCceEeEEeccccCC
Q 022019 192 YNK--SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ--TSAIYREDNMELLYVLHGQEGG 267 (304)
Q Consensus 192 ~d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~ 267 (304)
.++ .|++||+..+. . ..+ ..+........|+|++..++++...+| .|+++|+.+++... +......
T Consensus 263 ~~g~~~Iy~~d~~~~~--~---~~l----t~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~-lt~~~~~ 332 (430)
T PRK00178 263 KDGNPEIYVMDLASRQ--L---SRV----TNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAER-VTFVGNY 332 (430)
T ss_pred cCCCceEEEEECCCCC--e---EEc----ccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-eecCCCC
Confidence 444 68888987632 1 111 122334566789995555555544444 47777887765432 2212233
Q ss_pred eEEEEECCCCcEEEEeeccCC--eEEEEeccccee
Q 022019 268 VTHVQFSRDGNYLYTGGRKDP--YILCWDLRKAVQ 300 (304)
Q Consensus 268 v~~~~~~~~~~~l~~~~~~d~--~i~vwd~~~~~~ 300 (304)
.....|+|||++|+..+..++ .|.+||+.+++.
T Consensus 333 ~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~ 367 (430)
T PRK00178 333 NARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSV 367 (430)
T ss_pred ccceEECCCCCEEEEEEccCCceEEEEEECCCCCE
Confidence 456789999999988773333 588899887643
No 263
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.28 E-value=6e-10 Score=90.61 Aligned_cols=155 Identities=19% Similarity=0.239 Sum_probs=119.7
Q ss_pred CCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEE------CC--------------CCcEEEEE-cCC
Q 022019 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAF------NP--------------TGTKIFAG-YNK 194 (304)
Q Consensus 136 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~------~~--------------~~~~l~~~-~d~ 194 (304)
|...++|....||.+++|+...++....+........ ...+..| +| +...++-| ..|
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~--t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g 80 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSG--TCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQG 80 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccchhccC--cceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCc
Confidence 4556899999999999999998887776654332211 2333333 22 22345556 889
Q ss_pred eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEEC
Q 022019 195 SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFS 274 (304)
Q Consensus 195 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 274 (304)
.|.+|++..++ .........|.+.|.++.++. .-..|.+++.|+.+..|+......+..+.+....+.+++.+
T Consensus 81 ~v~~ys~~~g~------it~~~st~~h~~~v~~~~~~~-~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is 153 (541)
T KOG4547|consen 81 SVLLYSVAGGE------ITAKLSTDKHYGNVNEILDAQ-RLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCIS 153 (541)
T ss_pred cEEEEEecCCe------EEEEEecCCCCCcceeeeccc-ccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEc
Confidence 99999997642 112222367889999999988 66689999999999999999999999999888899999999
Q ss_pred CCCcEEEEeeccCCeEEEEecccceeee
Q 022019 275 RDGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 275 ~~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
|||..|++++ +.|++||+++++.+.
T Consensus 154 ~D~~~l~~as---~~ik~~~~~~kevv~ 178 (541)
T KOG4547|consen 154 PDGKILLTAS---RQIKVLDIETKEVVI 178 (541)
T ss_pred CCCCEEEecc---ceEEEEEccCceEEE
Confidence 9999999887 579999999998765
No 264
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=99.28 E-value=6e-09 Score=77.95 Aligned_cols=203 Identities=11% Similarity=0.156 Sum_probs=113.7
Q ss_pred eeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC-ccEE
Q 022019 63 LKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT-SCVF 141 (304)
Q Consensus 63 V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~l 141 (304)
=..++||||+..||.+...|+|++||+....+. .+..... ....-...|..+.|.+... ++. ...|
T Consensus 46 WRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf-~I~p~~~----------~~~d~~~Aiagl~Fl~~~~--s~~ws~EL 112 (282)
T PF15492_consen 46 WRKLAWSPDCTLLAYAESTGTIRVFDLMGSELF-VIPPAMS----------FPGDLSDAIAGLIFLEYKK--SAQWSYEL 112 (282)
T ss_pred heEEEECCCCcEEEEEcCCCeEEEEecccceeE-EcCcccc----------cCCccccceeeeEeecccc--ccccceeE
Confidence 456899999999999999999999999754332 1111110 0011234566666654431 222 2346
Q ss_pred EEEeCCCCEEEEEcCCC-----eeeEEeecccccccccceEEEEECCCCcEEEEE--cCCeEEEEEcCCCCccceeeeee
Q 022019 142 ASTTRDHPIHLWDATTG-----LLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG--YNKSVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 142 ~~~~~dg~i~i~d~~~~-----~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~v~d~~~~~~~~~~~~~~ 214 (304)
++...+|.++-|-+..+ +....+.... ..+..|.++.++|..++|++| ....-....
T Consensus 113 lvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~--~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~-------------- 176 (282)
T PF15492_consen 113 LVINYRGQLRSYLVSVGTNQGYQENHSFSFSS--HYPHGINSAVYHPKHRLLLVGGCEQNQDGMSK-------------- 176 (282)
T ss_pred EEEeccceeeeEEEEcccCCcceeeEEEEecc--cCCCceeEEEEcCCCCEEEEeccCCCCCcccc--------------
Confidence 67778888887776432 2333333322 233489999999998888844 322100110
Q ss_pred eccccccccceeEEEeecCCCcEEEE-EecCCe------EEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccC
Q 022019 215 KGNKEGQAGIMSAIAFSPTHTGMLAI-GSYSQT------SAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKD 287 (304)
Q Consensus 215 ~~~~~~~~~~v~~~~~~p~~~~~l~~-~~~dg~------i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d 287 (304)
+....+++-..-.+...+..+ ...|+. ..+|.+-+.+...........|..|..||||..|++.. .+
T Consensus 177 -----a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih-~s 250 (282)
T PF15492_consen 177 -----ASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIH-FS 250 (282)
T ss_pred -----ccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEE-cC
Confidence 011112222221111112211 221211 12333332222222223466899999999999999999 99
Q ss_pred CeEEEEeccccee
Q 022019 288 PYILCWDLRKAVQ 300 (304)
Q Consensus 288 ~~i~vwd~~~~~~ 300 (304)
|.|.+|++-+-++
T Consensus 251 G~lsLW~iPsL~~ 263 (282)
T PF15492_consen 251 GSLSLWEIPSLRL 263 (282)
T ss_pred CeEEEEecCcchh
Confidence 9999999976543
No 265
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.24 E-value=6.9e-11 Score=98.64 Aligned_cols=168 Identities=16% Similarity=0.248 Sum_probs=119.4
Q ss_pred ceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCee-eEEeecccccccccceEEEEECCC-CcEE
Q 022019 111 EASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLL-RCTYRAYDAVDEITAAFSVAFNPT-GTKI 188 (304)
Q Consensus 111 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~~~v~~i~~~~~-~~~l 188 (304)
..-..-+|+..++++.|+|. +|+ .+++++.|-.+..||+++... ...+..-.. ....++|+.. +..+
T Consensus 106 Ief~lhghsraitd~n~~~q----~pd--Vlatcsvdt~vh~wd~rSp~~p~ys~~~w~s-----~asqVkwnyk~p~vl 174 (1081)
T KOG0309|consen 106 IEFVLHGHSRAITDINFNPQ----HPD--VLATCSVDTYVHAWDMRSPHRPFYSTSSWRS-----AASQVKWNYKDPNVL 174 (1081)
T ss_pred eEEEEecCccceeccccCCC----CCc--ceeeccccccceeeeccCCCcceeeeecccc-----cCceeeecccCcchh
Confidence 33445667788999999876 333 799999999999999987542 222222111 5567899874 4555
Q ss_pred EEEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc-------------
Q 022019 189 FAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM------------- 255 (304)
Q Consensus 189 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~------------- 255 (304)
+.+..+.|.+||++.++.+...+ ++|...+..++|+......+++++.||+|++||....
T Consensus 175 asshg~~i~vwd~r~gs~pl~s~-------K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~p 247 (1081)
T KOG0309|consen 175 ASSHGNDIFVWDLRKGSTPLCSL-------KGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFP 247 (1081)
T ss_pred hhccCCceEEEeccCCCcceEEe-------cccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCc
Confidence 56688899999999875444332 5577778888888755567888999999999985321
Q ss_pred ------------------------------------------eEeEEeccccCCeEEEEECCCC----------cEEEEe
Q 022019 256 ------------------------------------------ELLYVLHGQEGGVTHVQFSRDG----------NYLYTG 283 (304)
Q Consensus 256 ------------------------------------------~~~~~~~~~~~~v~~~~~~~~~----------~~l~~~ 283 (304)
+++.+|.||...|....|-..+ -.|+|=
T Consensus 248 iw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTW 327 (1081)
T KOG0309|consen 248 IWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTW 327 (1081)
T ss_pred ceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEe
Confidence 3556677787777666663322 258888
Q ss_pred eccCCeEEEEeccc
Q 022019 284 GRKDPYILCWDLRK 297 (304)
Q Consensus 284 ~~~d~~i~vwd~~~ 297 (304)
+ .|..+++|-+.+
T Consensus 328 S-kD~~lrlWpI~~ 340 (1081)
T KOG0309|consen 328 S-KDQTLRLWPIDS 340 (1081)
T ss_pred e-cCCceEeeeccH
Confidence 8 999999998765
No 266
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.23 E-value=2e-08 Score=83.25 Aligned_cols=193 Identities=13% Similarity=0.062 Sum_probs=111.6
Q ss_pred ceeEEEEcCCCCe-EEEecC---CCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC
Q 022019 62 FLKGIKWSPDGSS-FLTSSE---DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (304)
Q Consensus 62 ~V~~i~~s~~~~~-l~s~~~---dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (304)
.+....|+|||+. ++..+. +..|.++|+.+++.. .............| +||
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~------------------~lt~~~g~~~~~~~-------SPD 243 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKE------------------KIASSQGMLVVSDV-------SKD 243 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEE------------------EEecCCCcEEeeEE-------CCC
Confidence 6778999999984 554443 346888888654321 11111222333444 889
Q ss_pred ccEEEEE-eCC--CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCC--eEEEEEcCCCCcccee
Q 022019 138 SCVFAST-TRD--HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNK--SVRVFDVHRPGRDFEK 210 (304)
Q Consensus 138 ~~~l~~~-~~d--g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~--~i~v~d~~~~~~~~~~ 210 (304)
|+.++.. +.+ ..|+++|+.+++... +..... ......|+|||+.|+ ++ ..+ .|++.|+..+..
T Consensus 244 G~~la~~~~~~g~~~Iy~~dl~~g~~~~-LT~~~~-----~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~---- 313 (419)
T PRK04043 244 GSKLLLTMAPKGQPDIYLYDTNTKTLTQ-ITNYPG-----IDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSV---- 313 (419)
T ss_pred CCEEEEEEccCCCcEEEEEECCCCcEEE-cccCCC-----ccCccEECCCCCEEEEEECCCCCceEEEEECCCCCe----
Confidence 9766554 333 468888988776443 322221 123568999999888 54 333 577777765321
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecC--------CeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEE
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS--------QTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYT 282 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 282 (304)
..+.. .+. ....|+|++..++++.... ..|.+.|+.++.. ..+... .......|+|||+.|+.
T Consensus 314 -~rlt~--~g~----~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~-~~~~~p~~SPDG~~I~f 384 (419)
T PRK04043 314 -EQVVF--HGK----NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTAN-GVNQFPRFSSDGGSIMF 384 (419)
T ss_pred -EeCcc--CCC----cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCC-CCcCCeEECCCCCEEEE
Confidence 11111 111 1248999555555554433 3688889877754 344432 23346899999998876
Q ss_pred eeccCC--eEEEEecccc
Q 022019 283 GGRKDP--YILCWDLRKA 298 (304)
Q Consensus 283 ~~~~d~--~i~vwd~~~~ 298 (304)
.....+ .|.+.++...
T Consensus 385 ~~~~~~~~~L~~~~l~g~ 402 (419)
T PRK04043 385 IKYLGNQSALGIIRLNYN 402 (419)
T ss_pred EEccCCcEEEEEEecCCC
Confidence 652323 4666676553
No 267
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.22 E-value=7.4e-09 Score=82.59 Aligned_cols=174 Identities=16% Similarity=0.166 Sum_probs=121.7
Q ss_pred EcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeC
Q 022019 68 WSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTR 146 (304)
Q Consensus 68 ~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~ 146 (304)
|++ +|.+++..|. |...|.+...+- .+...+...|.-..+ ..+++-++.|..
T Consensus 327 fa~~~Gd~ia~VSR-GkaFi~~~~~~~-------------------~iqv~~~~~VrY~r~-------~~~~e~~vigt~ 379 (668)
T COG4946 327 FAVVNGDYIALVSR-GKAFIMRPWDGY-------------------SIQVGKKGGVRYRRI-------QVDPEGDVIGTN 379 (668)
T ss_pred hccCCCcEEEEEec-CcEEEECCCCCe-------------------eEEcCCCCceEEEEE-------ccCCcceEEecc
Confidence 444 6888888775 566666544221 133344444544443 445667888999
Q ss_pred CC-CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccc
Q 022019 147 DH-PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGI 224 (304)
Q Consensus 147 dg-~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 224 (304)
|| .+-++|..+++........+ .|.++..+|+|++++++ ....+.+.|+.++.. ........+-
T Consensus 380 dgD~l~iyd~~~~e~kr~e~~lg------~I~av~vs~dGK~~vvaNdr~el~vididngnv--------~~idkS~~~l 445 (668)
T COG4946 380 DGDKLGIYDKDGGEVKRIEKDLG------NIEAVKVSPDGKKVVVANDRFELWVIDIDNGNV--------RLIDKSEYGL 445 (668)
T ss_pred CCceEEEEecCCceEEEeeCCcc------ceEEEEEcCCCcEEEEEcCceEEEEEEecCCCe--------eEecccccce
Confidence 98 89999999887665444333 88999999999999988 667899999987421 1111344567
Q ss_pred eeEEEeecCCCcEEEEEecCC----eEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEee
Q 022019 225 MSAIAFSPTHTGMLAIGSYSQ----TSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 225 v~~~~~~p~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
|+.++||| +++++|-+--+| .|++||+..++... .......=.+-+|.|||++|+--+
T Consensus 446 Itdf~~~~-nsr~iAYafP~gy~tq~Iklydm~~~Kiy~-vTT~ta~DfsPaFD~d~ryLYfLs 507 (668)
T COG4946 446 ITDFDWHP-NSRWIAYAFPEGYYTQSIKLYDMDGGKIYD-VTTPTAYDFSPAFDPDGRYLYFLS 507 (668)
T ss_pred eEEEEEcC-CceeEEEecCcceeeeeEEEEecCCCeEEE-ecCCcccccCcccCCCCcEEEEEe
Confidence 99999999 888999887765 59999998876543 333344446789999999987665
No 268
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=99.21 E-value=5.6e-10 Score=86.74 Aligned_cols=164 Identities=15% Similarity=0.135 Sum_probs=104.6
Q ss_pred eeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEE
Q 022019 63 LKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFA 142 (304)
Q Consensus 63 V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~ 142 (304)
+..+..++.+++||.+..+....++++......... ..+.++.-.|....+-.+.....
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl---------------------~~~~~v~~~~~ai~~~~~~~sv~ 123 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKL---------------------LDVSCVPKRPTAISFIREDTSVL 123 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCCccee---------------------eeEeecccCcceeeeeeccceEE
Confidence 445667788888988888877777777644220000 11222222222222222333344
Q ss_pred EEeCCC---CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccc
Q 022019 143 STTRDH---PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNK 218 (304)
Q Consensus 143 ~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~ 218 (304)
.+..-| .+.+|....+... ...+|.+.++.++|+||+++|+++ .|..|++-..... ..+....
T Consensus 124 v~dkagD~~~~di~s~~~~~~~------~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~-------f~Iesfc 190 (390)
T KOG3914|consen 124 VADKAGDVYSFDILSADSGRCE------PILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPAT-------FVIESFC 190 (390)
T ss_pred EEeecCCceeeeeecccccCcc------hhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcc-------cchhhhc
Confidence 443334 4444444333222 223555689999999999999987 9999999776432 2233334
Q ss_pred cccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec
Q 022019 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH 262 (304)
Q Consensus 219 ~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 262 (304)
.||...|..++.-+ + +.|++|+.|+++++||+.+++.+.++.
T Consensus 191 lGH~eFVS~isl~~-~-~~LlS~sGD~tlr~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 191 LGHKEFVSTISLTD-N-YLLLSGSGDKTLRLWDITSGKLLDTCD 232 (390)
T ss_pred cccHhheeeeeecc-C-ceeeecCCCCcEEEEecccCCcccccc
Confidence 78999999999987 3 368999999999999999998776653
No 269
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=99.20 E-value=1.9e-09 Score=90.07 Aligned_cols=213 Identities=17% Similarity=0.188 Sum_probs=139.2
Q ss_pred CCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (304)
+.+....|+.|+....++|.|+.||.++|-.+.+......... ......-.......+|+..|..+.| +.+
T Consensus 12 PnnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~g--laa~snLsmNQtLeGH~~sV~vvTW-------Ne~ 82 (1189)
T KOG2041|consen 12 PNNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSG--LAAASNLSMNQTLEGHNASVMVVTW-------NEN 82 (1189)
T ss_pred CCCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccc--cccccccchhhhhccCcceEEEEEe-------ccc
Confidence 3455688999999999999999999999998876554333222 1122223334466788899999999 557
Q ss_pred ccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCC--------Cccc
Q 022019 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRP--------GRDF 208 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~--------~~~~ 208 (304)
.+.|-+...+|-|.+|-+-.|+....+... ...+.|.+++|+.+|..|+.. .||.|.+=.+... +...
T Consensus 83 ~QKLTtSDt~GlIiVWmlykgsW~EEMiNn---RnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg~~l 159 (1189)
T KOG2041|consen 83 NQKLTTSDTSGLIIVWMLYKGSWCEEMINN---RNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKGQLL 159 (1189)
T ss_pred cccccccCCCceEEEEeeecccHHHHHhhC---cCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcchhec
Confidence 778989999999999999877643332221 233478899999999888844 7877755433221 0000
Q ss_pred ------------------------------------eeeeeeeccccccccceeEEEee--------cCCCcEEEEEecC
Q 022019 209 ------------------------------------EKYSTLKGNKEGQAGIMSAIAFS--------PTHTGMLAIGSYS 244 (304)
Q Consensus 209 ------------------------------------~~~~~~~~~~~~~~~~v~~~~~~--------p~~~~~l~~~~~d 244 (304)
.+..............+..+.|. | +...|+++-.+
T Consensus 160 ~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~p-drP~lavcy~n 238 (1189)
T KOG2041|consen 160 AHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPP-DRPRLAVCYAN 238 (1189)
T ss_pred cceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCC-CCCEEEEEEcC
Confidence 00000000111111224455554 3 45688999999
Q ss_pred CeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEee
Q 022019 245 QTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 245 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
|.+.|..-.+......+.. ...+..+.|+++|..|+.+|
T Consensus 239 Gr~QiMR~eND~~Pvv~dt-gm~~vgakWnh~G~vLAvcG 277 (1189)
T KOG2041|consen 239 GRMQIMRSENDPEPVVVDT-GMKIVGAKWNHNGAVLAVCG 277 (1189)
T ss_pred ceehhhhhcCCCCCeEEec-ccEeecceecCCCcEEEEcc
Confidence 9999887655443333432 36789999999999999998
No 270
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.17 E-value=1.3e-08 Score=84.86 Aligned_cols=156 Identities=13% Similarity=0.090 Sum_probs=91.2
Q ss_pred eeCCCccE--E-EEEeCCC--CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCC----eEEEEEc
Q 022019 133 ASDPTSCV--F-ASTTRDH--PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNK----SVRVFDV 201 (304)
Q Consensus 133 ~~~~~~~~--l-~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~----~i~v~d~ 201 (304)
.|+|||+. + ++...+| .|++.++.+++......... ......|+|||+.|+ ++ .+| .+.+|++
T Consensus 191 ~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g------~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~ 264 (428)
T PRK01029 191 TWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQG------NQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSL 264 (428)
T ss_pred eEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCC------CccceEECCCCCEEEEEECCCCCcceeEEEeec
Confidence 34889875 2 2343443 58888998876544333222 344689999999988 44 233 3344666
Q ss_pred CCCC-ccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEE--ecCC-ceEeEEeccccCCeEEEEECCCC
Q 022019 202 HRPG-RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY--REDN-MELLYVLHGQEGGVTHVQFSRDG 277 (304)
Q Consensus 202 ~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~--d~~~-~~~~~~~~~~~~~v~~~~~~~~~ 277 (304)
..+. ... ..+. ..........+|+|++..++++...+|...|| ++.. +.....+..+...+....|+|||
T Consensus 265 ~~g~~g~~---~~lt---~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG 338 (428)
T PRK01029 265 ETGAIGKP---RRLL---NEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDG 338 (428)
T ss_pred ccCCCCcc---eEee---cCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCC
Confidence 5421 111 1111 11122345679999544445455456654555 4432 23344455455567889999999
Q ss_pred cEEEEeeccC--CeEEEEeccccee
Q 022019 278 NYLYTGGRKD--PYILCWDLRKAVQ 300 (304)
Q Consensus 278 ~~l~~~~~~d--~~i~vwd~~~~~~ 300 (304)
++|+..+..+ ..|.+||+.+++.
T Consensus 339 ~~Laf~~~~~g~~~I~v~dl~~g~~ 363 (428)
T PRK01029 339 KKIAFCSVIKGVRQICVYDLATGRD 363 (428)
T ss_pred CEEEEEEcCCCCcEEEEEECCCCCe
Confidence 9998776233 3799999987754
No 271
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=99.17 E-value=1.3e-09 Score=80.11 Aligned_cols=109 Identities=14% Similarity=0.130 Sum_probs=79.3
Q ss_pred ceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEec
Q 022019 175 AAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~ 252 (304)
.|.+++-+|..+.++ +| .||.+.+||.+.. ..+......|+.++..+-|+|.++..|+++++||.+.-||.
T Consensus 181 ~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~-------~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wda 253 (319)
T KOG4714|consen 181 AVTALCSHPAQQHLVCCGTDDGIVGLWDARNV-------AMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDA 253 (319)
T ss_pred cchhhhCCcccccEEEEecCCCeEEEEEcccc-------cchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcC
Confidence 588999999776666 66 8999999999874 23333447889999999999999999999999999999997
Q ss_pred CCceEeEEe---ccc----------------------cCCeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 253 DNMELLYVL---HGQ----------------------EGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 253 ~~~~~~~~~---~~~----------------------~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
.+ +.+..- ..+ ...|++ |.--|..|++|+ +-+.|++++
T Consensus 254 s~-~~l~i~~~~s~~s~WLsgD~v~s~i~i~~ll~~~~~Sins--fDV~g~~lVcgt-d~eaIyl~~ 316 (319)
T KOG4714|consen 254 ST-TFLSISNQASVISSWLSGDPVKSRIEITSLLPSRSLSINS--FDVLGPCLVCGT-DAEAIYLTR 316 (319)
T ss_pred CC-ceEEecCccccccccccCCcccceEeeeccccccceeeee--eeccCceEEecc-ccceEEEec
Confidence 63 211100 001 112333 333588899998 888888875
No 272
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.16 E-value=3.4e-09 Score=81.00 Aligned_cols=159 Identities=12% Similarity=0.107 Sum_probs=101.3
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
....|...|..+-|+....++++.+.|..+.-.-.+.+..... ..+ .+. +....+
T Consensus 109 ~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~----------------Y~~------~~~---~t~~~~ 163 (404)
T KOG1409|consen 109 DYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGG----------------YNF------ETP---ASALQF 163 (404)
T ss_pred hhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccc----------------eEe------ecc---CCCCce
Confidence 4457888888998988888888888886654333332211100 000 000 000000
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCC--eeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTG--LLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
+-.+...|...|.|.+..+... ..+.++..+. ..+.++.|.|....+++| .|..+.+||+-..
T Consensus 164 --d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~-----~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~------- 229 (404)
T KOG1409|consen 164 --DALYAFVGDHSGQITMLKLEQNGCQLITTFNGHT-----GEVTCLKWDPGQRLLFSGASDHSVIMWDIGGR------- 229 (404)
T ss_pred --eeEEEEecccccceEEEEEeecCCceEEEEcCcc-----cceEEEEEcCCCcEEEeccccCceEEEeccCC-------
Confidence 1114555666677766665433 3334444433 499999999998888877 9999999999643
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~ 253 (304)
........+|...|..+..-+ --+.+.+++.||.|.+|+.+
T Consensus 230 ~g~~~el~gh~~kV~~l~~~~-~t~~l~S~~edg~i~~w~mn 270 (404)
T KOG1409|consen 230 KGTAYELQGHNDKVQALSYAQ-HTRQLISCGEDGGIVVWNMN 270 (404)
T ss_pred cceeeeeccchhhhhhhhhhh-hheeeeeccCCCeEEEEecc
Confidence 112222367777888888877 66789999999999999875
No 273
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=99.15 E-value=1.5e-08 Score=85.58 Aligned_cols=219 Identities=14% Similarity=0.232 Sum_probs=148.0
Q ss_pred ceeeeecCCCCceeEEEEcCCC------C------eEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeec
Q 022019 51 NQFRTSSIPNNFLKGIKWSPDG------S------SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTE 118 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~~~------~------~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (304)
+.+..+.-|...|+.+.|.|-. . .||++...|.|.+||........ ....+
T Consensus 46 q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~-----------------~l~~~ 108 (1062)
T KOG1912|consen 46 QLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVIN-----------------WLSHS 108 (1062)
T ss_pred hhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhh-----------------hhcCC
Confidence 3444778899999999998731 1 57778888999999987553322 23345
Q ss_pred CCeEEEEeecCccceeCCCc-cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECC-CCcEEE-EEcCCe
Q 022019 119 GESVYDFCWFPHMSASDPTS-CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP-TGTKIF-AGYNKS 195 (304)
Q Consensus 119 ~~~v~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~-~~~d~~ 195 (304)
..++.+++|.+. .++. ..|++-....++.+|+..+|+....+..... ...|+.++| |.+.+. .|..|.
T Consensus 109 ~~~~qdl~W~~~----rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~-----iLs~f~~DPfd~rh~~~l~s~g~ 179 (1062)
T KOG1912|consen 109 NDSVQDLCWVPA----RDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHE-----ILSCFRVDPFDSRHFCVLGSKGF 179 (1062)
T ss_pred Ccchhheeeeec----cCcchheeEEecCCcEEEEEEccCCceeeccccCCc-----ceeeeeeCCCCcceEEEEccCce
Confidence 578899999775 3344 4677777788999999999998776665443 566799999 556666 567888
Q ss_pred EEEEEcCCCCcc---ceeeeeeecc-c-----------ccccc---------ceeEEEeecCCCcEEEEEecCCeEEEEe
Q 022019 196 VRVFDVHRPGRD---FEKYSTLKGN-K-----------EGQAG---------IMSAIAFSPTHTGMLAIGSYSQTSAIYR 251 (304)
Q Consensus 196 i~v~d~~~~~~~---~~~~~~~~~~-~-----------~~~~~---------~v~~~~~~p~~~~~l~~~~~dg~i~i~d 251 (304)
+.+.+.-....+ .+.++..... . ..+.. ....++|+|.-.+ ++-......+.++|
T Consensus 180 vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn-~lfi~~prellv~d 258 (1062)
T KOG1912|consen 180 VLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRN-ILFITFPRELLVFD 258 (1062)
T ss_pred EEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhc-eEEEEeccceEEEc
Confidence 877776432221 1111111000 0 00000 0224678884444 44455678899999
Q ss_pred cCCceEeEEeccccCCeEEEEECCCC--cEEEEeeccCCeEEEEeccc
Q 022019 252 EDNMELLYVLHGQEGGVTHVQFSRDG--NYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 252 ~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~~d~~i~vwd~~~ 297 (304)
++-..++....-..+.+.-+.|-|++ ..|++.- .||.+.+|-.+.
T Consensus 259 le~~~~l~vvpier~~akfv~vlP~~~rd~LfclH-~nG~ltirvrk~ 305 (1062)
T KOG1912|consen 259 LEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLH-SNGRLTIRVRKE 305 (1062)
T ss_pred chhhceeEEEEeccCCcceeEeccCCCcceEEEEe-cCCeEEEEEeec
Confidence 99888888887667777777887766 4689898 999999997655
No 274
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.12 E-value=2.8e-10 Score=60.55 Aligned_cols=38 Identities=32% Similarity=0.553 Sum_probs=35.3
Q ss_pred ceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEee
Q 022019 51 NQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFS 88 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd 88 (304)
+.++.+.+|.+.|++|+|+|++.+|++|+.|++|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 34568899999999999999999999999999999997
No 275
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=99.12 E-value=4.3e-07 Score=70.40 Aligned_cols=190 Identities=16% Similarity=0.274 Sum_probs=115.8
Q ss_pred eeEEEEc-CCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEee-cCCeEEEEeecCccceeCCCccE
Q 022019 63 LKGIKWS-PDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVT-EGESVYDFCWFPHMSASDPTSCV 140 (304)
Q Consensus 63 V~~i~~s-~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~ 140 (304)
..++.+. +++.+++ +..++ +.++|+.+++......... .. ......++ +++++|++
T Consensus 42 ~~G~~~~~~~g~l~v-~~~~~-~~~~d~~~g~~~~~~~~~~-------------~~~~~~~~ND~-------~vd~~G~l 99 (246)
T PF08450_consen 42 PNGMAFDRPDGRLYV-ADSGG-IAVVDPDTGKVTVLADLPD-------------GGVPFNRPNDV-------AVDPDGNL 99 (246)
T ss_dssp EEEEEEECTTSEEEE-EETTC-EEEEETTTTEEEEEEEEET-------------TCSCTEEEEEE-------EE-TTS-E
T ss_pred CceEEEEccCCEEEE-EEcCc-eEEEecCCCcEEEEeeccC-------------CCcccCCCceE-------EEcCCCCE
Confidence 6677777 5655544 44444 5555877653211110000 00 11233344 45889998
Q ss_pred EEEEeCC--------CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-E-cCCeEEEEEcCCCCcccee
Q 022019 141 FASTTRD--------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-G-YNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 141 l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~-~d~~i~v~d~~~~~~~~~~ 210 (304)
.++.... |.|..++.. ++......... ..+.|+|+|+++.|++ . ..+.|..|++.........
T Consensus 100 y~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~------~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~ 172 (246)
T PF08450_consen 100 YVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLG------FPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSN 172 (246)
T ss_dssp EEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEES------SEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEE
T ss_pred EEEecCCCccccccccceEEECCC-CeEEEEecCcc------cccceEECCcchheeecccccceeEEEeccccccceee
Confidence 8776654 457777766 55443333222 5679999999998874 3 7888999999754432322
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEE-CCCCcEEEEee
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQF-SRDGNYLYTGG 284 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~ 284 (304)
...+.. .....+..-.+++.. +++++++....+.|.++|.+ ++.+..+......+++++| .|+.+.|+..+
T Consensus 173 ~~~~~~-~~~~~g~pDG~~vD~-~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 173 RRVFID-FPGGPGYPDGLAVDS-DGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFGGPDGKTLYVTT 244 (246)
T ss_dssp EEEEEE--SSSSCEEEEEEEBT-TS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEESTTSSEEEEEE
T ss_pred eeeEEE-cCCCCcCCCcceEcC-CCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEECCCCCEEEEEe
Confidence 222211 122223477899999 77788877788999999987 8888888765568999999 57777766554
No 276
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.10 E-value=5e-10 Score=59.56 Aligned_cols=39 Identities=28% Similarity=0.610 Sum_probs=37.1
Q ss_pred ceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 255 MELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 255 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
++++.++.+|.+.|++++|+|++.+|++++ .|+.|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~-~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGS-SDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEE-TTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeC-CCCEEEEEC
Confidence 468899999999999999999999999999 999999997
No 277
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=99.10 E-value=2.7e-10 Score=83.60 Aligned_cols=147 Identities=15% Similarity=0.229 Sum_probs=99.6
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeee-EEeecccccccccceEEEEECCCCcEEEEEcC------CeEEEEEcCCCCccce
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLR-CTYRAYDAVDEITAAFSVAFNPTGTKIFAGYN------KSVRVFDVHRPGRDFE 209 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d------~~i~v~d~~~~~~~~~ 209 (304)
-++-+++++.||.+.+++.+..... ........ .-.+..+...++++.++.= +..+.|+++..
T Consensus 100 ~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~-----~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~----- 169 (319)
T KOG4714|consen 100 TDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHS-----GSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPI----- 169 (319)
T ss_pred cCCceEecCCCceEEEEechHHHhhhhhcccccc-----cccccceeecccEEecCCcceEeeccceeeeccccc-----
Confidence 4556999999999999997652111 11111000 1123334445556654433 44566666542
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce-EeEEeccccCCeEEEEECCC-CcEEEEeeccC
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME-LLYVLHGQEGGVTHVQFSRD-GNYLYTGGRKD 287 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~d 287 (304)
..+....... ..|++++-+|...+++++|+.||.+.+||.++.. +...+..|+.++..+-|+|. +..|++++ .|
T Consensus 170 --~t~~~~~~~~-~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~s-ed 245 (319)
T KOG4714|consen 170 --KTLIPSKKAL-DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCS-ED 245 (319)
T ss_pred --cccccccccc-ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEec-CC
Confidence 1111111222 2389999999778899999999999999999875 55667899999999999995 56899999 99
Q ss_pred CeEEEEeccc
Q 022019 288 PYILCWDLRK 297 (304)
Q Consensus 288 ~~i~vwd~~~ 297 (304)
|.+-.||..+
T Consensus 246 Gslw~wdas~ 255 (319)
T KOG4714|consen 246 GSLWHWDAST 255 (319)
T ss_pred CcEEEEcCCC
Confidence 9999999875
No 278
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.09 E-value=2.5e-09 Score=80.80 Aligned_cols=231 Identities=15% Similarity=0.203 Sum_probs=132.5
Q ss_pred CceeEEEEcCCCC--eEEEecCCCeEEEeeCCCCCCcccc--------ccc--------c-ccccCCccceEEEeecCCe
Q 022019 61 NFLKGIKWSPDGS--SFLTSSEDKTLRIFSLPENGISYDV--------NAC--------S-LAKDQDSYEASLVVTEGES 121 (304)
Q Consensus 61 ~~V~~i~~s~~~~--~l~s~~~dg~v~vwd~~~~~~~~~~--------~~~--------~-~~~~~~~~~~~~~~~~~~~ 121 (304)
..|..|.|..++. .++..+.|++|++|.+.+..+.... ... . .....-.....+.......
T Consensus 86 EKin~I~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~r 165 (460)
T COG5170 86 EKINAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCR 165 (460)
T ss_pred HHhhheeeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccce
Confidence 4588899976543 5666788999999998765321000 000 0 0000000000111111111
Q ss_pred EE--EEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCee---eEEeecccccccccceEEEEECCCCcEEE--EEcCC
Q 022019 122 VY--DFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLL---RCTYRAYDAVDEITAAFSVAFNPTGTKIF--AGYNK 194 (304)
Q Consensus 122 v~--~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~~~~~v~~i~~~~~~~~l~--~~~d~ 194 (304)
|+ ...++...++++.|.+.++++ .|-.|.+|++.-... +..++.+....-...|++..|+|....++ ++..|
T Consensus 166 vyaNaH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG 244 (460)
T COG5170 166 VYANAHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKG 244 (460)
T ss_pred eccccceeEeeeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCC
Confidence 11 223333445567788878776 466799999874321 12223332222233678999999754444 66999
Q ss_pred eEEEEEcCCCCccceeeeeee--------ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc-eEeEEecccc
Q 022019 195 SVRVFDVHRPGRDFEKYSTLK--------GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM-ELLYVLHGQE 265 (304)
Q Consensus 195 ~i~v~d~~~~~~~~~~~~~~~--------~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~ 265 (304)
.|++-|+|...-+........ ..+.+....|..+.|+| +++++++-.. -+|+|||.+.. .|+.++.-|.
T Consensus 245 ~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~-ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~ 322 (460)
T COG5170 245 EIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSD-NGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHC 322 (460)
T ss_pred cEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcC-CCcEEEEecc-ceEEEEecccccCCceeechHH
Confidence 999999985322111111111 11122334588899999 7777776554 68999999864 4777776553
Q ss_pred ------------CCe---EEEEECCCCcEEEEeeccCCeEEEEec
Q 022019 266 ------------GGV---THVQFSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 266 ------------~~v---~~~~~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
..| ..+.||-|.+.+++|+ ..+..-+|-+
T Consensus 323 ~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgs-y~NNfgiyp~ 366 (460)
T COG5170 323 DLMDELNDVYENDAIFDKFEISFSGDDKHVLSGS-YSNNFGIYPT 366 (460)
T ss_pred HHHHHHHhhhhccceeeeEEEEecCCcccccccc-cccceeeecc
Confidence 223 3478898989999998 7776666653
No 279
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=99.09 E-value=8.4e-08 Score=71.19 Aligned_cols=162 Identities=8% Similarity=0.037 Sum_probs=110.9
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCCe-eeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccc
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTGL-LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDF 208 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~ 208 (304)
.++++++++++++.++...|..|.+.... .......... ...-.+..|+.....+|++ .||++.|||+|....+.
T Consensus 163 s~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t---~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm 239 (344)
T KOG4532|consen 163 SLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPT---SDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPM 239 (344)
T ss_pred eeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEeccc---CCCceeeeeccCcceEEEEecCCcEEEEEecccccch
Confidence 44669999999999999999999987532 2222121111 1244688999988888866 99999999999755433
Q ss_pred eeeeeeeccccccccceeEEEeecCCC-cEEEEEecCCeEEEEecCCceEeEEec-------ccc-CCeEEEEECCCCcE
Q 022019 209 EKYSTLKGNKEGQAGIMSAIAFSPTHT-GMLAIGSYSQTSAIYREDNMELLYVLH-------GQE-GGVTHVQFSRDGNY 279 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~-------~~~-~~v~~~~~~~~~~~ 279 (304)
.. .......|.+.++.+.|+|.+. .+|+..-.-+.+.+.|++++.....+. .|. ..|....|+.++.-
T Consensus 240 ~~---~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s 316 (344)
T KOG4532|consen 240 AE---ISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENES 316 (344)
T ss_pred hh---hcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCccccccccccccccccccCCCcc
Confidence 22 2233366899999999998332 255555556789999999886444332 222 34888889888888
Q ss_pred EEEeeccCCeEEEEeccccee
Q 022019 280 LYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 280 l~~~~~~d~~i~vwd~~~~~~ 300 (304)
+.+.. . -.+.-|++.+...
T Consensus 317 ~~v~~-e-~~~ae~ni~srsR 335 (344)
T KOG4532|consen 317 NDVKN-E-LQGAEYNILSRSR 335 (344)
T ss_pred ccccc-c-hhhheeeccccce
Confidence 77776 3 3456666655443
No 280
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=99.08 E-value=5.3e-09 Score=87.53 Aligned_cols=211 Identities=10% Similarity=0.123 Sum_probs=137.9
Q ss_pred eeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 54 RTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 54 ~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
.++.||+..|.-+.|+.+.+.|-|...+|.|.||-+-.+....+. +.-...+.|.+++|
T Consensus 65 QtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEM---------------iNnRnKSvV~SmsW------ 123 (1189)
T KOG2041|consen 65 QTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEM---------------INNRNKSVVVSMSW------ 123 (1189)
T ss_pred hhhccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHH---------------hhCcCccEEEEEEE------
Confidence 378999999999999999999999999999999998766543222 22233467889999
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCeeeE-EeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCC-------
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGLLRC-TYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRP------- 204 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~------- 204 (304)
+.+|..+.....||.|.+=.++..+.-. .++.. ....+.|++|.+.+..+ .+|.+.+||....
T Consensus 124 -n~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg~-------~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~ 195 (1189)
T KOG2041|consen 124 -NLDGTKICIVYEDGAVIVGSVDGNRIWGKELKGQ-------LLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEK 195 (1189)
T ss_pred -cCCCcEEEEEEccCCEEEEeeccceecchhcchh-------eccceeecccHHHHHhhhcCCcEEEecccccHHHhhhh
Confidence 6788899999999988877665433211 11111 23356677766655544 5666666664320
Q ss_pred C-------------ccceeeee-------------------------eec-------cccccccceeEEEeecCCCcEEE
Q 022019 205 G-------------RDFEKYST-------------------------LKG-------NKEGQAGIMSAIAFSPTHTGMLA 239 (304)
Q Consensus 205 ~-------------~~~~~~~~-------------------------~~~-------~~~~~~~~v~~~~~~p~~~~~l~ 239 (304)
. ..+..+.. +.. ......-.+....|+| +|.+|+
T Consensus 196 ~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~dtgm~~vgakWnh-~G~vLA 274 (1189)
T KOG2041|consen 196 DCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVVDTGMKIVGAKWNH-NGAVLA 274 (1189)
T ss_pred ceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCCCeEEecccEeecceecC-CCcEEE
Confidence 0 00000000 000 0001113377889999 777888
Q ss_pred EEecC---------CeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 240 IGSYS---------QTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 240 ~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
+++.+ +.|.+|.. -|+.+.+++.....|++++|-..|-.++.+- |+.|++=+++.
T Consensus 275 vcG~~~da~~~~d~n~v~Fysp-~G~i~gtlkvpg~~It~lsWEg~gLriA~Av--dsfiyfanIRP 338 (1189)
T KOG2041|consen 275 VCGNDSDADEPTDSNKVHFYSP-YGHIVGTLKVPGSCITGLSWEGTGLRIAIAV--DSFIYFANIRP 338 (1189)
T ss_pred EccCcccccCccccceEEEecc-chhheEEEecCCceeeeeEEcCCceEEEEEe--cceEEEEeecc
Confidence 88754 25777764 5777888888888999999988777777664 77777666654
No 281
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=99.05 E-value=8.2e-10 Score=84.34 Aligned_cols=148 Identities=13% Similarity=0.216 Sum_probs=107.3
Q ss_pred EEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccc
Q 022019 142 ASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEG 220 (304)
Q Consensus 142 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~ 220 (304)
++.+.+-.|-+-|+.+|... .+.. .+.|.++.|...++++..| .+|.|..+|+|...... . ......-
T Consensus 228 fs~G~sqqv~L~nvetg~~q-sf~s------ksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~-~---~~a~rly 296 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQQ-SFQS------KSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGN-G---WCAQRLY 296 (425)
T ss_pred ecccccceeEEEEeeccccc-cccc------chhHHHHHhcccCCeeEecccCCcEEEEEeeecccCC-C---cceEEEE
Confidence 45556677888888877432 2222 1278899999988999977 99999999998741110 0 0111134
Q ss_pred cccceeEEEeecCCCcEEEEEecCCeEEEEecCCceE---eEEeccccCCeEE--EEECCCCcEEEEeeccCCeEEEEec
Q 022019 221 QAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL---LYVLHGQEGGVTH--VQFSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 221 ~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~v~~--~~~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
|...|+++..-...+..|++.+.+|+|++||++.-++ +.++.||...-.- +...+....++++| +|...++|.+
T Consensus 297 h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~G-dDcytRiWsl 375 (425)
T KOG2695|consen 297 HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVG-DDCYTRIWSL 375 (425)
T ss_pred cCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEcc-CeeEEEEEec
Confidence 6677888876654567889999999999999998776 8888888654333 33456777899999 9999999999
Q ss_pred ccceee
Q 022019 296 RKAVQV 301 (304)
Q Consensus 296 ~~~~~~ 301 (304)
+.|..+
T Consensus 376 ~~ghLl 381 (425)
T KOG2695|consen 376 DSGHLL 381 (425)
T ss_pred ccCcee
Confidence 988544
No 282
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.03 E-value=3.4e-07 Score=84.32 Aligned_cols=222 Identities=13% Similarity=0.126 Sum_probs=127.4
Q ss_pred eEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEE
Q 022019 64 KGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFA 142 (304)
Q Consensus 64 ~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~ 142 (304)
..+++++ ++..+++-+.++.|++||...... ..+.... .... ..+..-...-..|..++++++++.|+
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~i-~~ig~~g----~~G~------~dG~~~~a~f~~P~GIavd~~gn~LY 639 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGNFI-VQIGSTG----EEGL------RDGSFEDATFNRPQGLAYNAKKNLLY 639 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCCCCEE-EEEccCC----CcCC------CCCchhccccCCCcEEEEeCCCCEEE
Confidence 4688887 466777777888999999764321 1110000 0000 00000011122466677788877665
Q ss_pred EEe-CCCCEEEEEcCCCeeeEEeeccccc------------ccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCcc
Q 022019 143 STT-RDHPIHLWDATTGLLRCTYRAYDAV------------DEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRD 207 (304)
Q Consensus 143 ~~~-~dg~i~i~d~~~~~~~~~~~~~~~~------------~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~ 207 (304)
++. ..+.|+.+|+.++.. .++...... ........++++|++..++ +. .++.|++||...+..
T Consensus 640 VaDt~n~~Ir~id~~~~~V-~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v- 717 (1057)
T PLN02919 640 VADTENHALREIDFVNETV-RTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVT- 717 (1057)
T ss_pred EEeCCCceEEEEecCCCEE-EEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeE-
Confidence 554 456799999877653 233211000 0011346899999554444 44 788999999865311
Q ss_pred ceeeee--eeccc------cccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEe-------------ccc--
Q 022019 208 FEKYST--LKGNK------EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVL-------------HGQ-- 264 (304)
Q Consensus 208 ~~~~~~--~~~~~------~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------------~~~-- 264 (304)
..+.. ..... .........++++|+++.++++-+.++.|++||+.++...... -..
T Consensus 718 -~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG 796 (1057)
T PLN02919 718 -RVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDG 796 (1057)
T ss_pred -EEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCC
Confidence 00000 00000 0111235679999955557777778899999999865432111 000
Q ss_pred ------cCCeEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 265 ------EGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 265 ------~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
-.....++++++|..+++-. .+++|++||..++..
T Consensus 797 ~g~~~~l~~P~Gvavd~dG~LYVADs-~N~rIrviD~~tg~v 837 (1057)
T PLN02919 797 VGSEVLLQHPLGVLCAKDGQIYVADS-YNHKIKKLDPATKRV 837 (1057)
T ss_pred chhhhhccCCceeeEeCCCcEEEEEC-CCCEEEEEECCCCeE
Confidence 01236889999998777777 899999999987653
No 283
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.00 E-value=4e-07 Score=82.44 Aligned_cols=206 Identities=15% Similarity=0.214 Sum_probs=129.2
Q ss_pred CCCceeEEEEcCCCCeEEEecC---C---CeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSE---D---KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~---d---g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
+.+.-..|+|-.||.|||+.+. . ..+|||+-+ +.+....... .+--..++|
T Consensus 208 ~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v-----------------~gLe~~l~W----- 264 (928)
T PF04762_consen 208 WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPV-----------------DGLEGALSW----- 264 (928)
T ss_pred cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccC-----------------CCccCCccC-----
Confidence 5566778999999999998764 2 579999875 2221111000 011223445
Q ss_pred eeCCCccEEEEEeC---CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccce
Q 022019 133 ASDPTSCVFASTTR---DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 133 ~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~ 209 (304)
.|.|+++|+... ...|.+|. ++|..-..+..... .....|..+.|++++..||+-....|.+|-...- -+-
T Consensus 265 --rPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~l~~~-~~~~~v~~l~Wn~ds~iLAv~~~~~vqLWt~~NY--HWY 338 (928)
T PF04762_consen 265 --RPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFTLRFD-PEEEKVIELAWNSDSEILAVWLEDRVQLWTRSNY--HWY 338 (928)
T ss_pred --CCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEecCCC-CCCceeeEEEECCCCCEEEEEecCCceEEEeeCC--EEE
Confidence 778999998865 34566666 44544444444321 1223789999999999999774555999988541 111
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC----Cc--------eEeEEec---------------
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED----NM--------ELLYVLH--------------- 262 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~----~~--------~~~~~~~--------------- 262 (304)
..+.+. ......+..+.|+|.....|.+.+.+|.+..++.. .+ ..+..+.
T Consensus 339 LKqei~---~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VP 415 (928)
T PF04762_consen 339 LKQEIR---FSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVP 415 (928)
T ss_pred EEEEEE---ccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCC
Confidence 111111 11222345599999878888888887877666532 11 0111111
Q ss_pred --------cccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 263 --------GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 263 --------~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
.-...|.+++|++++..+++-. .||.|.+|....
T Consensus 416 PPMs~~~l~~~~~v~~vaf~~~~~~~avl~-~d~~l~~~~~~~ 457 (928)
T PF04762_consen 416 PPMSSYELELPSPVNDVAFSPSNSRFAVLT-SDGSLSIYEWDL 457 (928)
T ss_pred chHhceEEcCCCCcEEEEEeCCCCeEEEEE-CCCCEEEEEecC
Confidence 1245799999999998888888 899999998644
No 284
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.99 E-value=4.5e-06 Score=64.69 Aligned_cols=196 Identities=18% Similarity=0.227 Sum_probs=119.6
Q ss_pred EEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeC-CCccEEE
Q 022019 65 GIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD-PTSCVFA 142 (304)
Q Consensus 65 ~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~l~ 142 (304)
++.|.+ ++.++++--..+.|..|+..++... ...... ...+. +. +++.++
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~-------------------~~~~~~-~~G~~-------~~~~~g~l~- 55 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVE-------------------VIDLPG-PNGMA-------FDRPDGRLY- 55 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEE-------------------EEESSS-EEEEE-------EECTTSEEE-
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEE-------------------EEecCC-CceEE-------EEccCCEEE-
Confidence 578988 7777777778899999998755321 111111 22332 24 455544
Q ss_pred EEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC--------CeEEEEEcCCCCccceeeee
Q 022019 143 STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN--------KSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 143 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d--------~~i~v~d~~~~~~~~~~~~~ 213 (304)
.+...+ +.++|+.+++.................+.++++|+|++.++. .. |.|..++... . . ..
T Consensus 56 v~~~~~-~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~~--~-~---~~ 128 (246)
T PF08450_consen 56 VADSGG-IAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPDG--K-V---TV 128 (246)
T ss_dssp EEETTC-EEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETTS--E-E---EE
T ss_pred EEEcCc-eEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCCC--e-E---EE
Confidence 444444 666699988766555542211123378899999999977754 22 4566676651 1 1 11
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC--c-----eEeEEeccccCCeEEEEECCCCcEEEEeecc
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN--M-----ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRK 286 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~--~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 286 (304)
.. ........++|+|++..++++-+..+.|..|++.. . +....+....+..-.+++..+|+..++.. .
T Consensus 129 ~~----~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~-~ 203 (246)
T PF08450_consen 129 VA----DGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADW-G 203 (246)
T ss_dssp EE----EEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEE-T
T ss_pred Ee----cCcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEc-C
Confidence 11 11233679999995555666778889999999853 2 12223333233478899999998777666 7
Q ss_pred CCeEEEEecccceee
Q 022019 287 DPYILCWDLRKAVQV 301 (304)
Q Consensus 287 d~~i~vwd~~~~~~~ 301 (304)
.+.|.+++.+ |+.+
T Consensus 204 ~~~I~~~~p~-G~~~ 217 (246)
T PF08450_consen 204 GGRIVVFDPD-GKLL 217 (246)
T ss_dssp TTEEEEEETT-SCEE
T ss_pred CCEEEEECCC-ccEE
Confidence 8999999987 6543
No 285
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=98.98 E-value=5.7e-09 Score=95.37 Aligned_cols=159 Identities=14% Similarity=0.254 Sum_probs=120.0
Q ss_pred eecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCC
Q 022019 116 VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNK 194 (304)
Q Consensus 116 ~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~ 194 (304)
.++-..|..+.-+ |...+.++|+.||.+++|....++.+..+...+. ..|+.+.|+.+|+.+..+ .||
T Consensus 2205 k~~v~~v~r~~sH-------p~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~----s~vtr~~f~~qGnk~~i~d~dg 2273 (2439)
T KOG1064|consen 2205 KHPVENVRRMTSH-------PSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGN----SRVTRSRFNHQGNKFGIVDGDG 2273 (2439)
T ss_pred ecccCceeeecCC-------CCCceEEecCCCceEEEEeccCCCeEEEeeccCc----chhhhhhhcccCCceeeeccCC
Confidence 3334556666554 4455899999999999999998888877765443 388999999999999866 999
Q ss_pred eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEe---cCCeEEEEecCCc---eEeEEeccccCCe
Q 022019 195 SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS---YSQTSAIYREDNM---ELLYVLHGQEGGV 268 (304)
Q Consensus 195 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~---~dg~i~i~d~~~~---~~~~~~~~~~~~v 268 (304)
.+.+|.+.. +.+ . ....|......+.|-. ..+++++ .++.+.+||.--. .++. ..|.+.+
T Consensus 2274 ~l~l~q~~p--k~~---~----s~qchnk~~~Df~Fi~---s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~ga 2339 (2439)
T KOG1064|consen 2274 DLSLWQASP--KPY---T----SWQCHNKALSDFRFIG---SLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGA 2339 (2439)
T ss_pred ceeecccCC--cce---e----ccccCCccccceeeee---hhhhccccCCCCCcccchhcccCcccceee--eecCCCc
Confidence 999999862 111 1 1145666677777764 3566654 4678999996422 2343 6799999
Q ss_pred EEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 269 THVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 269 ~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
+++++-|....|++|| .+|.|++||++..+.
T Consensus 2340 T~l~~~P~~qllisgg-r~G~v~l~D~rqrql 2370 (2439)
T KOG1064|consen 2340 TVLAYAPKHQLLISGG-RKGEVCLFDIRQRQL 2370 (2439)
T ss_pred eEEEEcCcceEEEecC-CcCcEEEeehHHHHH
Confidence 9999999999999999 999999999987644
No 286
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=98.97 E-value=1.9e-09 Score=85.90 Aligned_cols=165 Identities=16% Similarity=0.217 Sum_probs=122.1
Q ss_pred eecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCC--CcEEE-EEc
Q 022019 116 VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT--GTKIF-AGY 192 (304)
Q Consensus 116 ~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~--~~~l~-~~~ 192 (304)
..|.+.|..+.| +..|..+++|+.|..|.+||+..++....+.. +|...|....|-|. .+.++ ++.
T Consensus 139 ~~H~GcVntV~F-------N~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~S----GH~~NvfQaKFiP~s~d~ti~~~s~ 207 (559)
T KOG1334|consen 139 NKHKGCVNTVHF-------NQRGDVLASGSDDLQVVVWDWVSGSPKLSFES----GHCNNVFQAKFIPFSGDRTIVTSSR 207 (559)
T ss_pred cCCCCccceeee-------cccCceeeccCccceEEeehhhccCccccccc----ccccchhhhhccCCCCCcCceeccc
Confidence 345556666655 77899999999999999999998877665543 23335666667663 35555 569
Q ss_pred CCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec---cccC---
Q 022019 193 NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH---GQEG--- 266 (304)
Q Consensus 193 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~--- 266 (304)
||.+++=.+...+.... ......|.++|..++.-|+...-|.+++.|+.+.-+|++...+...+. .+..
T Consensus 208 dgqvr~s~i~~t~~~e~-----t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v 282 (559)
T KOG1334|consen 208 DGQVRVSEILETGYVEN-----TKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERV 282 (559)
T ss_pred cCceeeeeeccccceec-----ceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccce
Confidence 99999987765332111 122256888899999999888899999999999999999876544443 3333
Q ss_pred CeEEEEECCCCc-EEEEeeccCCeEEEEeccc
Q 022019 267 GVTHVQFSRDGN-YLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 267 ~v~~~~~~~~~~-~l~~~~~~d~~i~vwd~~~ 297 (304)
....++..|... .+++++ .|..+++||.+.
T Consensus 283 ~L~~Ia~~P~nt~~faVgG-~dqf~RvYD~R~ 313 (559)
T KOG1334|consen 283 GLYTIAVDPRNTNEFAVGG-SDQFARVYDQRR 313 (559)
T ss_pred eeeeEecCCCCccccccCC-hhhhhhhhcccc
Confidence 578899999877 677788 999999999875
No 287
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=98.96 E-value=9.4e-08 Score=77.85 Aligned_cols=114 Identities=18% Similarity=0.289 Sum_probs=77.0
Q ss_pred ceEEEEECCCCcEEE--EE--cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEE---ecCCeE
Q 022019 175 AAFSVAFNPTGTKIF--AG--YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIG---SYSQTS 247 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~--~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~---~~dg~i 247 (304)
.|...+|.|.|..++ .| ...++.+|.+++.....+.+..+. ....+.+-|+| .|++++++ |..|.+
T Consensus 447 ~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~d------k~~~N~vfwsP-kG~fvvva~l~s~~g~l 519 (698)
T KOG2314|consen 447 SVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELD------KKFANTVFWSP-KGRFVVVAALVSRRGDL 519 (698)
T ss_pred heeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhc------ccccceEEEcC-CCcEEEEEEecccccce
Confidence 788999999998887 34 457899999986444444333332 13367899999 66666655 347889
Q ss_pred EEEecCCceEeEEec-cccCCeEEEEECCCCcEEEEeec-----cCCeEEEEecc
Q 022019 248 AIYREDNMELLYVLH-GQEGGVTHVQFSRDGNYLYTGGR-----KDPYILCWDLR 296 (304)
Q Consensus 248 ~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-----~d~~i~vwd~~ 296 (304)
.++|+....+..+-. .| ...+.+.|.|.|+|++++++ .|.--++|+++
T Consensus 520 ~F~D~~~a~~k~~~~~eh-~~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfq 573 (698)
T KOG2314|consen 520 EFYDTDYADLKDTASPEH-FAATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQ 573 (698)
T ss_pred EEEecchhhhhhccCccc-cccccceECCCCCEEEEeeehhhhccccceEEEEee
Confidence 999987533322222 23 34688999999999999882 23345666654
No 288
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.96 E-value=5e-07 Score=72.48 Aligned_cols=146 Identities=11% Similarity=0.075 Sum_probs=107.2
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCC-eEEEEEcCCCCccceeeeee
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNK-SVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~-~i~v~d~~~~~~~~~~~~~~ 214 (304)
+|.+++..|. |...+.+...+-.++.- +...|.-..+..+++-++.| .|| .+-|||.+.... ..+
T Consensus 331 ~Gd~ia~VSR-GkaFi~~~~~~~~iqv~-------~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~-----kr~ 397 (668)
T COG4946 331 NGDYIALVSR-GKAFIMRPWDGYSIQVG-------KKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEV-----KRI 397 (668)
T ss_pred CCcEEEEEec-CcEEEECCCCCeeEEcC-------CCCceEEEEEccCCcceEEeccCCceEEEEecCCceE-----EEe
Confidence 6778888875 56778776655443321 11256667777777777766 777 899999986321 111
Q ss_pred eccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCC----eE
Q 022019 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDP----YI 290 (304)
Q Consensus 215 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~----~i 290 (304)
...-+.|.++..+| +++.++++.....|.++|+.++.+...=+...+-|+.+.|||+++++|-+- -+| .|
T Consensus 398 ----e~~lg~I~av~vs~-dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYaf-P~gy~tq~I 471 (668)
T COG4946 398 ----EKDLGNIEAVKVSP-DGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAF-PEGYYTQSI 471 (668)
T ss_pred ----eCCccceEEEEEcC-CCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEec-CcceeeeeE
Confidence 33456699999999 788899999999999999999987655455567899999999999999776 554 69
Q ss_pred EEEecccceee
Q 022019 291 LCWDLRKAVQV 301 (304)
Q Consensus 291 ~vwd~~~~~~~ 301 (304)
+++|+..++..
T Consensus 472 klydm~~~Kiy 482 (668)
T COG4946 472 KLYDMDGGKIY 482 (668)
T ss_pred EEEecCCCeEE
Confidence 99999887643
No 289
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.96 E-value=1.7e-06 Score=69.34 Aligned_cols=192 Identities=11% Similarity=0.117 Sum_probs=117.1
Q ss_pred CeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeC----------CCCEE
Q 022019 82 KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTR----------DHPIH 151 (304)
Q Consensus 82 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~----------dg~i~ 151 (304)
++|.+.|..+.+.... ....+.|+.. ++||++.+.++.. +..|.
T Consensus 27 ~~v~ViD~~~~~v~g~-------------------------i~~G~~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~ 80 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGM-------------------------TDGGFLPNPV-VASDGSFFAHASTVYSRIARGKRTDYVE 80 (352)
T ss_pred ceEEEEECCCCEEEEE-------------------------EEccCCCcee-ECCCCCEEEEEeccccccccCCCCCEEE
Confidence 7899999886543211 2233455554 6999988777755 78899
Q ss_pred EEEcCCCeeeEEeecccccc--cccceEEEEECCCCcEEEEE--c-CCeEEEEEcCCCCccceeeeeee-----------
Q 022019 152 LWDATTGLLRCTYRAYDAVD--EITAAFSVAFNPTGTKIFAG--Y-NKSVRVFDVHRPGRDFEKYSTLK----------- 215 (304)
Q Consensus 152 i~d~~~~~~~~~~~~~~~~~--~~~~v~~i~~~~~~~~l~~~--~-d~~i~v~d~~~~~~~~~~~~~~~----------- 215 (304)
+||+.+.+....+....... .......++++|||+++++. . +..|.+.|+.+... ...+....
T Consensus 81 v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kv-v~ei~vp~~~~vy~t~e~~ 159 (352)
T TIGR02658 81 VIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAF-VRMMDVPDCYHIFPTANDT 159 (352)
T ss_pred EEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcE-EEEEeCCCCcEEEEecCCc
Confidence 99999999988887643211 11234578999999999965 3 78999999976421 11000000
Q ss_pred -------ccc-------cccccceeEE--------------EeecCCCcEEEEEecCCeEEEEecCCc-----eEeEEec
Q 022019 216 -------GNK-------EGQAGIMSAI--------------AFSPTHTGMLAIGSYSQTSAIYREDNM-----ELLYVLH 262 (304)
Q Consensus 216 -------~~~-------~~~~~~v~~~--------------~~~p~~~~~l~~~~~dg~i~i~d~~~~-----~~~~~~~ 262 (304)
... .+. ...... .|.+.++.++++..+ |.|.+.|+... ..+..+.
T Consensus 160 ~~~~~~Dg~~~~v~~d~~g~-~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~ 237 (352)
T TIGR02658 160 FFMHCRDGSLAKVGYGTKGN-PKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFT 237 (352)
T ss_pred cEEEeecCceEEEEecCCCc-eEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeecc
Confidence 000 000 001111 233424556665555 99999996432 3333322
Q ss_pred c-------ccCCeEEEEECCCCcEEEEee-c--------cCCeEEEEecccceeee
Q 022019 263 G-------QEGGVTHVQFSRDGNYLYTGG-R--------KDPYILCWDLRKAVQVV 302 (304)
Q Consensus 263 ~-------~~~~v~~~~~~~~~~~l~~~~-~--------~d~~i~vwd~~~~~~~~ 302 (304)
. ..+.+.-++++|+|+.++... . ..+.|.++|..+++.+-
T Consensus 238 ~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~ 293 (352)
T TIGR02658 238 EAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLR 293 (352)
T ss_pred ccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEE
Confidence 1 123455599999999988742 0 22589999999987653
No 290
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=98.95 E-value=3.9e-06 Score=64.00 Aligned_cols=212 Identities=14% Similarity=0.151 Sum_probs=110.4
Q ss_pred eecCCCCceeEEEEcCCCC-eEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 55 TSSIPNNFLKGIKWSPDGS-SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~-~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
.+.+-.+.+.+|+|+|+.. ++++....+.|...+.. ++.... +.+..-...-.+++
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~----------------i~l~g~~D~EgI~y------ 72 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRR----------------IPLDGFGDYEGITY------ 72 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEE----------------EE-SS-SSEEEEEE------
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEE----------------EeCCCCCCceeEEE------
Confidence 4445566699999999755 66666777888777764 322111 22222233444444
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCe------eeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCC--C
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGL------LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHR--P 204 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~--~ 204 (304)
..++.++++--.++.+.++++.... ....+...........+.+++|+|.++.|++. ...-..+|.++. .
T Consensus 73 -~g~~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~ 151 (248)
T PF06977_consen 73 -LGNGRYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPG 151 (248)
T ss_dssp --STTEEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-
T ss_pred -ECCCEEEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccC
Confidence 4466666655568899999884321 11222221111222368899999987777755 555566776654 1
Q ss_pred Cccceeeeeee-ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc---------CCeEEEEEC
Q 022019 205 GRDFEKYSTLK-GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE---------GGVTHVQFS 274 (304)
Q Consensus 205 ~~~~~~~~~~~-~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---------~~v~~~~~~ 274 (304)
........... .........+.++.++|..+++++....+..|..+| ..++++..+.-.. ...-.|+|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d 230 (248)
T PF06977_consen 152 GFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFD 230 (248)
T ss_dssp SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-
T ss_pred ccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEEC
Confidence 11111111100 001223334789999998888999999999999999 5777766554211 246789999
Q ss_pred CCCcEEEEeeccCCeEEEE
Q 022019 275 RDGNYLYTGGRKDPYILCW 293 (304)
Q Consensus 275 ~~~~~l~~~~~~d~~i~vw 293 (304)
++|+ |+..+ .-+..++|
T Consensus 231 ~~G~-LYIvs-EpNlfy~f 247 (248)
T PF06977_consen 231 PDGN-LYIVS-EPNLFYRF 247 (248)
T ss_dssp TT---EEEEE-TTTEEEEE
T ss_pred CCCC-EEEEc-CCceEEEe
Confidence 9985 66666 66655554
No 291
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.95 E-value=4.8e-08 Score=82.80 Aligned_cols=185 Identities=12% Similarity=0.097 Sum_probs=127.7
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
.++.++|++++ +++|+-|+.+|.|++++...... ..+.|... +-+|
T Consensus 38 ~~D~is~~av~--~~~~~~GtH~g~v~~~~~~~~~~-------------------~~~~~s~~-------------~~~G 83 (846)
T KOG2066|consen 38 QNDAISCCAVH--DKFFALGTHRGAVYLTTCQGNPK-------------------TNFDHSSS-------------ILEG 83 (846)
T ss_pred hhhHHHHHHhh--cceeeeccccceEEEEecCCccc-------------------cccccccc-------------ccCC
Confidence 35668888886 67899999999999998763310 11111111 3478
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCC-----CcEEEEE-cCCeEEEEEcCCCCccceeee
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT-----GTKIFAG-YNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-----~~~l~~~-~d~~i~v~d~~~~~~~~~~~~ 212 (304)
.++++|+.||+|.|-.+-+.+...++.... ++.+++++|+ .+.+++| ..| +.++.-+--+.....
T Consensus 84 ey~asCS~DGkv~I~sl~~~~~~~~~df~r------piksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v-- 154 (846)
T KOG2066|consen 84 EYVASCSDDGKVVIGSLFTDDEITQYDFKR------PIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV-- 154 (846)
T ss_pred ceEEEecCCCcEEEeeccCCccceeEecCC------cceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccce--
Confidence 999999999999999998888777777655 8899999998 3455555 555 777765432221111
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccC------CeEEEEECCCCcEEEEeecc
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEG------GVTHVQFSRDGNYLYTGGRK 286 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~~~ 286 (304)
......++|.++.|.. .++|-++.+| |++||+...+.+..+..... .-..+.|.++.+ |+.|-
T Consensus 155 ----~l~~~eG~I~~i~W~g---~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~-LVIGW-- 223 (846)
T KOG2066|consen 155 ----VLSEGEGPIHSIKWRG---NLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDR-LVIGW-- 223 (846)
T ss_pred ----eeecCccceEEEEecC---cEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCe-EEEec--
Confidence 1244567899999964 4788887666 99999998888777763333 235578876655 55453
Q ss_pred CCeEEEEeccc
Q 022019 287 DPYILCWDLRK 297 (304)
Q Consensus 287 d~~i~vwd~~~ 297 (304)
..+|++..++.
T Consensus 224 ~d~v~i~~I~~ 234 (846)
T KOG2066|consen 224 GDSVKICSIKK 234 (846)
T ss_pred CCeEEEEEEec
Confidence 45788888873
No 292
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.95 E-value=6.3e-09 Score=84.66 Aligned_cols=152 Identities=18% Similarity=0.244 Sum_probs=104.2
Q ss_pred CccEEEEEeCCCCEEEEEcCCC-------eeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccce
Q 022019 137 TSCVFASTTRDHPIHLWDATTG-------LLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~ 209 (304)
+.+.+++++.|++|++|.++.. .+..++..|. .+|.++.|-.+.++++ +.||.|.+||.-.+ +...
T Consensus 746 NENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHk-----k~i~~igfL~~lr~i~-ScD~giHlWDPFig-r~La 818 (1034)
T KOG4190|consen 746 NENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHK-----KPIHDIGFLADLRSIA-SCDGGIHLWDPFIG-RLLA 818 (1034)
T ss_pred cccceeeccCCceEEEEEeccccCccccceeeeEhhhcc-----Ccccceeeeeccceee-eccCcceeeccccc-chhH
Confidence 5567999999999999999742 1333344443 3888999988777665 45889999997542 1111
Q ss_pred eeeeeeccccccccceeEEEeecC-CCcEEEE-EecCCeEEEEecCCceEeEEec-----cccCCeEEEEECCCCcEEEE
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPT-HTGMLAI-GSYSQTSAIYREDNMELLYVLH-----GQEGGVTHVQFSRDGNYLYT 282 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~-~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~ 282 (304)
+.......+ .+..+..-|+ +..++.+ ++...+|+++|.+.++-...++ +....+.+++..|.|+++++
T Consensus 819 --q~~dapk~~---a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa 893 (1034)
T KOG4190|consen 819 --QMEDAPKEG---AGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAA 893 (1034)
T ss_pred --hhhcCcccC---CCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhH
Confidence 011111122 2233333332 3334444 4778999999999987666665 33456899999999999999
Q ss_pred eeccCCeEEEEecccceee
Q 022019 283 GGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 283 ~~~~d~~i~vwd~~~~~~~ 301 (304)
+- .+|+|.+.|.++|+.+
T Consensus 894 ~L-SnGci~~LDaR~G~vI 911 (1034)
T KOG4190|consen 894 AL-SNGCIAILDARNGKVI 911 (1034)
T ss_pred Hh-cCCcEEEEecCCCcee
Confidence 98 9999999999999754
No 293
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.93 E-value=9.3e-07 Score=68.39 Aligned_cols=194 Identities=15% Similarity=0.129 Sum_probs=117.2
Q ss_pred EEEcCCCCeEEEe-----cCCCeEEEeeCCCC-CCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 66 IKWSPDGSSFLTS-----SEDKTLRIFSLPEN-GISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 66 i~~s~~~~~l~s~-----~~dg~v~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
-.||+||++|++. +..|.|-|||.... ....+ ....-.-|+.+.+.|||+
T Consensus 56 g~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E------------------------~~s~GIGPHel~l~pDG~ 111 (305)
T PF07433_consen 56 GVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGE------------------------FPSHGIGPHELLLMPDGE 111 (305)
T ss_pred EEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeE------------------------ecCCCcChhhEEEcCCCC
Confidence 6899999999986 34689999999722 11111 111112233344466776
Q ss_pred EEEEEeC------------------CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCC------
Q 022019 140 VFASTTR------------------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNK------ 194 (304)
Q Consensus 140 ~l~~~~~------------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~------ 194 (304)
.|+++.. +-++.+.|..+|+.+........ .+...+..++++++|..+++. ..|
T Consensus 112 tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~-~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~ 190 (305)
T PF07433_consen 112 TLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPD-LHQLSIRHLAVDGDGTVAFAMQYQGDPGDAP 190 (305)
T ss_pred EEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCcc-ccccceeeEEecCCCcEEEEEecCCCCCccC
Confidence 6666522 33466667778887766554322 223378899999999888754 222
Q ss_pred -eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEE
Q 022019 195 -SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQF 273 (304)
Q Consensus 195 -~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 273 (304)
-+.+++... .+..+.............+-+|++++++..+.+++=.-|.+.+||..+++.+....- ..+..++-
T Consensus 191 PLva~~~~g~---~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l--~D~cGva~ 265 (305)
T PF07433_consen 191 PLVALHRRGG---ALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPL--PDACGVAP 265 (305)
T ss_pred CeEEEEcCCC---cceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeecccc--Cceeeeee
Confidence 133443322 122222211122334567899999995444555555678899999999998876653 34677777
Q ss_pred CCCCcEEEEeeccCCeEEE
Q 022019 274 SRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 274 ~~~~~~l~~~~~~d~~i~v 292 (304)
.+++ ++++.+ .|.+..
T Consensus 266 ~~~~-f~~ssG--~G~~~~ 281 (305)
T PF07433_consen 266 TDDG-FLVSSG--QGQLIR 281 (305)
T ss_pred cCCc-eEEeCC--CccEEE
Confidence 7777 677666 454433
No 294
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.92 E-value=6.2e-08 Score=83.33 Aligned_cols=141 Identities=18% Similarity=0.264 Sum_probs=105.7
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEc---------CCeEEEEEcCCCCc
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGY---------NKSVRVFDVHRPGR 206 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~---------d~~i~v~d~~~~~~ 206 (304)
+++.+++|...|+|.+-|.++-+.+.++..|.. .+.. |+-.|+.|+ +|. |.-|+|||+|+-.
T Consensus 186 Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~-----siSD--fDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmr- 257 (1118)
T KOG1275|consen 186 NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSG-----SISD--FDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMR- 257 (1118)
T ss_pred cCcEEEeecccceEEeecCCcCceeeeeecccc-----ceee--eeccCCeEEEeecccccccccccchhhhhhhhhhh-
Confidence 778999999999999999999999999998875 5544 445677877 553 4558999998731
Q ss_pred cceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC---Cc-eEeEEeccccCCeEEEEECCCCcEEEE
Q 022019 207 DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED---NM-ELLYVLHGQEGGVTHVQFSRDGNYLYT 282 (304)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~---~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~ 282 (304)
.+. .+ .-+.+ ..-+.|+|.-...+++++..|...+.|.. +. .-+..+......+..++++++|..++.
T Consensus 258 al~---PI----~~~~~-P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alaf 329 (1118)
T KOG1275|consen 258 ALS---PI----QFPYG-PQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAF 329 (1118)
T ss_pred ccC---Cc----ccccC-chhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEE
Confidence 111 11 11111 24578999778889999999999999943 32 223344444556999999999999999
Q ss_pred eeccCCeEEEEe
Q 022019 283 GGRKDPYILCWD 294 (304)
Q Consensus 283 ~~~~d~~i~vwd 294 (304)
|. .+|.|.+|.
T Consensus 330 gd-~~g~v~~wa 340 (1118)
T KOG1275|consen 330 GD-HEGHVNLWA 340 (1118)
T ss_pred ec-ccCcEeeec
Confidence 99 999999997
No 295
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.92 E-value=7.1e-07 Score=72.11 Aligned_cols=131 Identities=21% Similarity=0.293 Sum_probs=88.9
Q ss_pred CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE--EE-cCCeEEEEEcCCCCccceeeeeeeccccccccc
Q 022019 148 HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF--AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGI 224 (304)
Q Consensus 148 g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~--~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 224 (304)
..++|+++......... ... ++|..+.|.|.++.++ .| ....+.++|++.. +.. ......
T Consensus 255 snLyl~~~~e~~i~V~~-~~~-----~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N---------l~~--~~Pe~~ 317 (561)
T COG5354 255 SNLYLLRITERSIPVEK-DLK-----DPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN---------LRF--YFPEQK 317 (561)
T ss_pred ceEEEEeecccccceec-ccc-----ccceeeeecccCCceeEEecccccceeecccccc---------eEE--ecCCcc
Confidence 45788887744333222 212 2899999999988777 45 8899999999863 110 111222
Q ss_pred eeEEEeecCCCcEEEEEecC---CeEEEEecCCceE-eEEeccccCCeEEEEECCCCcEEEEee-----ccCCeEEEEec
Q 022019 225 MSAIAFSPTHTGMLAIGSYS---QTSAIYREDNMEL-LYVLHGQEGGVTHVQFSRDGNYLYTGG-----RKDPYILCWDL 295 (304)
Q Consensus 225 v~~~~~~p~~~~~l~~~~~d---g~i~i~d~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~~d~~i~vwd~ 295 (304)
=..+.|+| .+++++.++-| |.|-+||...... +..+.+. ..+-+.|+|||.++.+.. +.|..|.|||+
T Consensus 318 rNT~~fsp-~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~--n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v 394 (561)
T COG5354 318 RNTIFFSP-HERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGL--NTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDV 394 (561)
T ss_pred cccccccC-cccEEEEecCCccccceEEeccCCceEEEEEeecC--CceEeeccCCceEEEecCCCcccccCcceEEEEe
Confidence 34678999 66677776654 6799999876544 4366643 346678999999987764 35788999998
Q ss_pred ccc
Q 022019 296 RKA 298 (304)
Q Consensus 296 ~~~ 298 (304)
...
T Consensus 395 ~g~ 397 (561)
T COG5354 395 YGA 397 (561)
T ss_pred cCc
Confidence 654
No 296
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.92 E-value=9.2e-07 Score=80.17 Aligned_cols=201 Identities=13% Similarity=0.205 Sum_probs=130.7
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEe----eCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIF----SLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vw----d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
..+.|.++.|-++...++.+..+|.|.+. +..+.. ..+...-...|.+++|
T Consensus 74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~------------------~E~VG~vd~GI~a~~W------- 128 (928)
T PF04762_consen 74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDE------------------IEIVGSVDSGILAASW------- 128 (928)
T ss_pred CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCce------------------eEEEEEEcCcEEEEEE-------
Confidence 45789999999999988889999999998 333221 1133334467888888
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeE------------------------Eeeccccc----------------c---
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRC------------------------TYRAYDAV----------------D--- 171 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~------------------------~~~~~~~~----------------~--- 171 (304)
|||+.+|+.+..++++.+.+- +..++. .+.+..+. +
T Consensus 129 SPD~Ella~vT~~~~l~~mt~-~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s 207 (928)
T PF04762_consen 129 SPDEELLALVTGEGNLLLMTR-DFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS 207 (928)
T ss_pred CCCcCEEEEEeCCCEEEEEec-cceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc
Confidence 889999999999998877643 111111 11110000 0
Q ss_pred cccceEEEEECCCCcEEEEE-c---C---CeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEec-
Q 022019 172 EITAAFSVAFNPTGTKIFAG-Y---N---KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY- 243 (304)
Q Consensus 172 ~~~~v~~i~~~~~~~~l~~~-~---d---~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~- 243 (304)
....-..|+|-.||.++|++ . . +.++||+-+. .+....+.-.+--.+++|.| .|.+||+...
T Consensus 208 ~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~ReG---------~L~stSE~v~gLe~~l~WrP-sG~lIA~~q~~ 277 (928)
T PF04762_consen 208 WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSREG---------ELQSTSEPVDGLEGALSWRP-SGNLIASSQRL 277 (928)
T ss_pred cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCCc---------eEEeccccCCCccCCccCCC-CCCEEEEEEEc
Confidence 11134578999999999953 2 2 5789998642 11111122222345789999 7778887765
Q ss_pred --CCeEEEEecCCceEeEEec----cccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 244 --SQTSAIYREDNMELLYVLH----GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 244 --dg~i~i~d~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
...|.+|. ++|-.-..|. .....|..+.|++|+..||..- .|. |.+|-..+-
T Consensus 278 ~~~~~VvFfE-rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~-~~~-vqLWt~~NY 335 (928)
T PF04762_consen 278 PDRHDVVFFE-RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWL-EDR-VQLWTRSNY 335 (928)
T ss_pred CCCcEEEEEe-cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEe-cCC-ceEEEeeCC
Confidence 34577777 4554333332 3456799999999999999876 554 999987764
No 297
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=98.91 E-value=2.1e-07 Score=75.88 Aligned_cols=136 Identities=18% Similarity=0.286 Sum_probs=90.4
Q ss_pred eEEEeecCCeEEEEeecCccceeCCCccEEEEE--eCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE
Q 022019 112 ASLVVTEGESVYDFCWFPHMSASDPTSCVFAST--TRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF 189 (304)
Q Consensus 112 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 189 (304)
..+.+...++|+++.| +|+++-|+++ -.--.+.|||++ +.++..+.. + +=+++-|+|.|++|+
T Consensus 263 ~~V~L~k~GPVhdv~W-------~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~e--g-----pRN~~~fnp~g~ii~ 327 (566)
T KOG2315|consen 263 VSVPLLKEGPVHDVTW-------SPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFPE--G-----PRNTAFFNPHGNIIL 327 (566)
T ss_pred EEEecCCCCCceEEEE-------CCCCCEEEEEEecccceEEEEcCC-CCEeEeCCC--C-----CccceEECCCCCEEE
Confidence 3455556789999999 5677666555 345679999986 445444432 2 446899999999999
Q ss_pred -EE---cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEec------CCeEEEEecCCceEeE
Q 022019 190 -AG---YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY------SQTSAIYREDNMELLY 259 (304)
Q Consensus 190 -~~---~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~------dg~i~i~d~~~~~~~~ 259 (304)
+| .-|.|-|||+... +.+..+ . ...-+-+.|+| +|.++++++. |+.++||+. +|..+.
T Consensus 328 lAGFGNL~G~mEvwDv~n~----K~i~~~----~--a~~tt~~eW~P-dGe~flTATTaPRlrvdNg~Kiwhy-tG~~l~ 395 (566)
T KOG2315|consen 328 LAGFGNLPGDMEVWDVPNR----KLIAKF----K--AANTTVFEWSP-DGEYFLTATTAPRLRVDNGIKIWHY-TGSLLH 395 (566)
T ss_pred EeecCCCCCceEEEeccch----hhcccc----c--cCCceEEEEcC-CCcEEEEEeccccEEecCCeEEEEe-cCceee
Confidence 66 4589999999762 111211 1 22256789999 6778887764 688999998 555554
Q ss_pred EeccccCCeEEEEECC
Q 022019 260 VLHGQEGGVTHVQFSR 275 (304)
Q Consensus 260 ~~~~~~~~v~~~~~~~ 275 (304)
.-.- ...+..+.|-|
T Consensus 396 ~~~f-~sEL~qv~W~P 410 (566)
T KOG2315|consen 396 EKMF-KSELLQVEWRP 410 (566)
T ss_pred hhhh-hHhHhheeeee
Confidence 3321 11567777765
No 298
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.89 E-value=6.4e-06 Score=63.88 Aligned_cols=205 Identities=13% Similarity=0.157 Sum_probs=124.7
Q ss_pred eeEEEEcC-CCCeEEEecCCCe-EEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccE
Q 022019 63 LKGIKWSP-DGSSFLTSSEDKT-LRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCV 140 (304)
Q Consensus 63 V~~i~~s~-~~~~l~s~~~dg~-v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 140 (304)
...++.+| .+..++.+-.-|+ ..+||..++.....+... .+...+. ...||+||++
T Consensus 7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~----------------~gRHFyG------Hg~fs~dG~~ 64 (305)
T PF07433_consen 7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAP----------------PGRHFYG------HGVFSPDGRL 64 (305)
T ss_pred ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCC----------------CCCEEec------CEEEcCCCCE
Confidence 34677888 5556666666554 678888776543222111 1111111 2356999999
Q ss_pred EEEEeC-----CCCEEEEEcC-CCeeeEEeecccccccccceEEEEECCCCcEEEEEcCC--------e-----------
Q 022019 141 FASTTR-----DHPIHLWDAT-TGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNK--------S----------- 195 (304)
Q Consensus 141 l~~~~~-----dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~--------~----------- 195 (304)
|++.-. .|.|-|||.. +-+.+..+..+.. ....+.+.|||+.|+++..| .
T Consensus 65 LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GI-----GPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~ps 139 (305)
T PF07433_consen 65 LYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGI-----GPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPS 139 (305)
T ss_pred EEEeccccCCCcEEEEEEECcCCcEEEeEecCCCc-----ChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCc
Confidence 998744 4789999998 5556666766654 34468899999777754322 2
Q ss_pred EEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCe-------EEEEecCCceEeEEec------
Q 022019 196 VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQT-------SAIYREDNMELLYVLH------ 262 (304)
Q Consensus 196 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~-------i~i~d~~~~~~~~~~~------ 262 (304)
+.+.|..++ ..+.+.......|.-.+..+++++ ++..++..-..|. |.+++... .+..+.
T Consensus 140 L~~ld~~sG----~ll~q~~Lp~~~~~lSiRHLa~~~-~G~V~~a~Q~qg~~~~~~PLva~~~~g~--~~~~~~~p~~~~ 212 (305)
T PF07433_consen 140 LVYLDARSG----ALLEQVELPPDLHQLSIRHLAVDG-DGTVAFAMQYQGDPGDAPPLVALHRRGG--ALRLLPAPEEQW 212 (305)
T ss_pred eEEEecCCC----ceeeeeecCccccccceeeEEecC-CCcEEEEEecCCCCCccCCeEEEEcCCC--cceeccCChHHH
Confidence 333333332 111111111133556689999999 5655555444432 44454332 222222
Q ss_pred -cccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 263 -GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 263 -~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
.-.+.+-+|+++++|.++++++-..+.+.+||..+++.+
T Consensus 213 ~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~ 252 (305)
T PF07433_consen 213 RRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLL 252 (305)
T ss_pred HhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEe
Confidence 234679999999999988766657889999999998765
No 299
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.88 E-value=9e-07 Score=75.97 Aligned_cols=201 Identities=14% Similarity=0.141 Sum_probs=122.1
Q ss_pred EEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeC
Q 022019 67 KWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTR 146 (304)
Q Consensus 67 ~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~ 146 (304)
+|++.+..++.|+.+|.|.+.+-.-.. ...+ ......+...-| ...+..+|++.+.
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~s~~~-~~~f-----------------qa~~~siv~~L~------~~~~~~~L~sv~E 85 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNSSFQL-IRGF-----------------QAYEQSIVQFLY------ILNKQNFLFSVGE 85 (933)
T ss_pred EEcCCCceEEEeeccccEEEeccccee-eehh-----------------eecchhhhhHhh------cccCceEEEEEee
Confidence 467788899999999999888754110 0000 001111111111 1123356777776
Q ss_pred CCC-----EEEEEcCCC------eeeEEee--cccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeee
Q 022019 147 DHP-----IHLWDATTG------LLRCTYR--AYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 147 dg~-----i~i~d~~~~------~~~~~~~--~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~ 212 (304)
|+. +++|+++.- ++..... .+.......++.+++.+.+-+.+++| .+|.|..+.-.-....... .
T Consensus 86 d~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr-~ 164 (933)
T KOG2114|consen 86 DEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSR-Q 164 (933)
T ss_pred cCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccc-e
Confidence 654 899999743 1221111 11222245588899999999999999 9999999854321111111 0
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceE-eEEeccccCCeEEEEECCCCcEEEEeeccCCeEE
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL-LYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYIL 291 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~ 291 (304)
. .......+|+.+.+..++...+++++ -..|.+|.+....+ ...+..|..++.|..+++....+++++ +..|.
T Consensus 165 ~---~~~~~~~pITgL~~~~d~~s~lFv~T-t~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~--~e~l~ 238 (933)
T KOG2114|consen 165 D---YSHRGKEPITGLALRSDGKSVLFVAT-TEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG--SEFLY 238 (933)
T ss_pred e---eeccCCCCceeeEEecCCceeEEEEe-cceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec--CceEE
Confidence 1 11234567999999885554445444 35799999975443 444777888999999987666466665 56789
Q ss_pred EEecccc
Q 022019 292 CWDLRKA 298 (304)
Q Consensus 292 vwd~~~~ 298 (304)
+|+....
T Consensus 239 fY~sd~~ 245 (933)
T KOG2114|consen 239 FYDSDGR 245 (933)
T ss_pred EEcCCCc
Confidence 9988653
No 300
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.88 E-value=1.8e-08 Score=77.25 Aligned_cols=136 Identities=13% Similarity=0.151 Sum_probs=89.4
Q ss_pred CeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCC-----eeeEEeecccccccccceEEEEECC-CCcEEEE-Ec
Q 022019 120 ESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTG-----LLRCTYRAYDAVDEITAAFSVAFNP-TGTKIFA-GY 192 (304)
Q Consensus 120 ~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-----~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~-~~ 192 (304)
..|.++.| ...+++++.|+..|.|..+|++.+ .+...+ . |.+.|+++..-. ++++|.+ +.
T Consensus 253 sDVfAlQf-------~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-y-----h~Ssvtslq~Lq~s~q~LmaS~M 319 (425)
T KOG2695|consen 253 SDVFALQF-------AGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-Y-----HDSSVTSLQILQFSQQKLMASDM 319 (425)
T ss_pred hhHHHHHh-------cccCCeeEecccCCcEEEEEeeecccCCCcceEEE-E-----cCcchhhhhhhccccceEeeccC
Confidence 45656555 345678999999999999999865 222222 2 223777877665 5667775 49
Q ss_pred CCeEEEEEcCCCCccceeeeeeeccccccccce--eEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc----C
Q 022019 193 NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIM--SAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE----G 266 (304)
Q Consensus 193 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~ 266 (304)
+|.|++||+|..... ..+... .+|...- .-+-.+| ....+++++.|-..+||.++.+.++.+++-.. .
T Consensus 320 ~gkikLyD~R~~K~~-~~V~qY----eGHvN~~a~l~~~v~~-eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~s~~e~ 393 (425)
T KOG2695|consen 320 TGKIKLYDLRATKCK-KSVMQY----EGHVNLSAYLPAHVKE-EEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPYSASEV 393 (425)
T ss_pred cCceeEeeehhhhcc-cceeee----eccccccccccccccc-ccceEEEccCeeEEEEEecccCceeeccCCCCccccc
Confidence 999999999874221 112222 3443222 2233455 45578889999999999999999998886332 2
Q ss_pred CeEEEEEC
Q 022019 267 GVTHVQFS 274 (304)
Q Consensus 267 ~v~~~~~~ 274 (304)
.+.+++|.
T Consensus 394 d~~sv~~~ 401 (425)
T KOG2695|consen 394 DIPSVAFD 401 (425)
T ss_pred cccceehh
Confidence 45566664
No 301
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.87 E-value=1.2e-06 Score=72.87 Aligned_cols=150 Identities=10% Similarity=0.080 Sum_probs=92.2
Q ss_pred ceeCCCccE-EEEEeCC---CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE---cCCeEEEEEcCC
Q 022019 132 SASDPTSCV-FASTTRD---HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG---YNKSVRVFDVHR 203 (304)
Q Consensus 132 ~~~~~~~~~-l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~---~d~~i~v~d~~~ 203 (304)
..++|+|+. ++..+.+ ..|+++|+.+++......... ......|+|||+.++ +. .+..|+++|+..
T Consensus 193 p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g------~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~ 266 (419)
T PRK04043 193 PKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQG------MLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNT 266 (419)
T ss_pred EEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCC------cEEeeEECCCCCEEEEEEccCCCcEEEEEECCC
Confidence 356899984 6654443 469999998887655443222 445678999998887 32 335688888765
Q ss_pred CCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCC--eEEEEecCCceEeEEeccccCCeEEEEECCCCcEEE
Q 022019 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ--TSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 281 (304)
+. . ..+. .+........|+|++..++++....+ .|++.|+.+++....... .. ....|+|||++|+
T Consensus 267 g~--~---~~LT----~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~-g~--~~~~~SPDG~~Ia 334 (419)
T PRK04043 267 KT--L---TQIT----NYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH-GK--NNSSVSTYKNYIV 334 (419)
T ss_pred Cc--E---EEcc----cCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC-CC--cCceECCCCCEEE
Confidence 31 1 1111 11112334579996655666654444 477788877665332221 11 1348999999988
Q ss_pred EeeccC--------CeEEEEecccce
Q 022019 282 TGGRKD--------PYILCWDLRKAV 299 (304)
Q Consensus 282 ~~~~~d--------~~i~vwd~~~~~ 299 (304)
..+... ..|.+.|+.++.
T Consensus 335 ~~~~~~~~~~~~~~~~I~v~d~~~g~ 360 (419)
T PRK04043 335 YSSRETNNEFGKNTFNLYLISTNSDY 360 (419)
T ss_pred EEEcCCCcccCCCCcEEEEEECCCCC
Confidence 776232 368888887764
No 302
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.85 E-value=3.6e-08 Score=78.22 Aligned_cols=210 Identities=12% Similarity=0.048 Sum_probs=136.2
Q ss_pred CCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (304)
-|++.|+.+.-+ -.+++.+++.||.++.|--..-....-+. ....|-..+.++ +.+.+
T Consensus 7 mhrd~i~hv~~t-ka~fiiqASlDGh~KFWkKs~isGvEfVK--------------hFraHL~~I~sl-------~~S~d 64 (558)
T KOG0882|consen 7 MHRDVITHVFPT-KAKFIIQASLDGHKKFWKKSRISGVEFVK--------------HFRAHLGVILSL-------AVSYD 64 (558)
T ss_pred cccceeeeEeee-hhheEEeeecchhhhhcCCCCccceeehh--------------hhHHHHHHHHhh-------hcccc
Confidence 377778777654 56799999999999999654211000000 001111222222 33668
Q ss_pred ccEEEEEeC-CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCC--cEEEEE--cCCeEEEEEcCCCCccceeee
Q 022019 138 SCVFASTTR-DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG--TKIFAG--YNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 138 ~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~--~~l~~~--~d~~i~v~d~~~~~~~~~~~~ 212 (304)
+.++.+.+. |..++++|+.+-....-+....-. ...++..+|.. ..++++ .++.+.++|-.....+..
T Consensus 65 g~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lP----g~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~--- 137 (558)
T KOG0882|consen 65 GWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLP----GFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDG--- 137 (558)
T ss_pred ceeEeeccCcccceeEEEeeccchhhhcccccCC----CceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccc---
Confidence 888999887 999999999875544333322210 11122223321 255544 889999999876432211
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC------ceEeEEe---------ccccCCeEEEEECCCC
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN------MELLYVL---------HGQEGGVTHVQFSRDG 277 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~------~~~~~~~---------~~~~~~v~~~~~~~~~ 277 (304)
....-|..+|..+.++| .+..+++....|.|.-|.... .+....+ .-.+....++.|+|+|
T Consensus 138 ---~fkklH~sPV~~i~y~q-a~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g 213 (558)
T KOG0882|consen 138 ---YFKKLHFSPVKKIRYNQ-AGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDG 213 (558)
T ss_pred ---eecccccCceEEEEeec-cccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEcccc
Confidence 12255788899999999 777888888889999998762 1111122 1234567899999999
Q ss_pred cEEEEeeccCCeEEEEecccceee
Q 022019 278 NYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 278 ~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
..+.+-+ .|..|+++++++|+.+
T Consensus 214 ~qistl~-~DrkVR~F~~KtGklv 236 (558)
T KOG0882|consen 214 AQISTLN-PDRKVRGFVFKTGKLV 236 (558)
T ss_pred CcccccC-cccEEEEEEeccchhh
Confidence 9999999 9999999999998754
No 303
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=98.85 E-value=2.6e-09 Score=91.38 Aligned_cols=205 Identities=15% Similarity=0.172 Sum_probs=136.1
Q ss_pred ccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEe
Q 022019 47 YHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFC 126 (304)
Q Consensus 47 ~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 126 (304)
+..++..+.+..|+..-+|++|+.+.++|+.|+-.|.|+++++.++......+. |+.+++.+.
T Consensus 1088 FSRFr~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~nc-----------------H~SavT~ve 1150 (1516)
T KOG1832|consen 1088 FSRFRSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNC-----------------HQSAVTLVE 1150 (1516)
T ss_pred HhhcccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccc-----------------ccccccccc
Confidence 344566678889999999999999999999999999999999998765443333 335555553
Q ss_pred ecCccceeCCCccEEEEEeCCC--CEEEEEcCC-CeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcC
Q 022019 127 WFPHMSASDPTSCVFASTTRDH--PIHLWDATT-GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVH 202 (304)
Q Consensus 127 ~~~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~ 202 (304)
- +.+|..+++.+.-. -..+|++.+ +....++. .-.++.|+..-..-+.| ......+||+.
T Consensus 1151 P-------s~dgs~~Ltsss~S~PlsaLW~~~s~~~~~Hsf~---------ed~~vkFsn~~q~r~~gt~~d~a~~YDvq 1214 (1516)
T KOG1832|consen 1151 P-------SVDGSTQLTSSSSSSPLSALWDASSTGGPRHSFD---------EDKAVKFSNSLQFRALGTEADDALLYDVQ 1214 (1516)
T ss_pred c-------cCCcceeeeeccccCchHHHhccccccCcccccc---------ccceeehhhhHHHHHhcccccceEEEecc
Confidence 3 55676666554433 357999864 44444444 33478898765444444 55678999998
Q ss_pred CCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEE
Q 022019 203 RPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYT 282 (304)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 282 (304)
+.......+... .+....-....|+|++ .+++ .|| .+||.+..+.+..|...... -.-.|+|.|..++.
T Consensus 1215 T~~~l~tylt~~----~~~~y~~n~a~FsP~D-~LIl---ndG--vLWDvR~~~aIh~FD~ft~~-~~G~FHP~g~eVII 1283 (1516)
T KOG1832|consen 1215 TCSPLQTYLTDT----VTSSYSNNLAHFSPCD-TLIL---NDG--VLWDVRIPEAIHRFDQFTDY-GGGGFHPSGNEVII 1283 (1516)
T ss_pred cCcHHHHhcCcc----hhhhhhccccccCCCc-ceEe---eCc--eeeeeccHHHHhhhhhheec-ccccccCCCceEEe
Confidence 853322211111 1222223678899944 4544 344 48999988877777644322 23469999999988
Q ss_pred eeccCCeEEEEecccceee
Q 022019 283 GGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 283 ~~~~d~~i~vwd~~~~~~~ 301 (304)
-+ -|||+++.+.+
T Consensus 1284 NS------EIwD~RTF~lL 1296 (1516)
T KOG1832|consen 1284 NS------EIWDMRTFKLL 1296 (1516)
T ss_pred ec------hhhhhHHHHHH
Confidence 77 48999987543
No 304
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=98.85 E-value=4.7e-07 Score=73.92 Aligned_cols=182 Identities=13% Similarity=0.213 Sum_probs=116.0
Q ss_pred eEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEE
Q 022019 64 KGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFAS 143 (304)
Q Consensus 64 ~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~ 143 (304)
+-+.|||-|.||+|-..-| |.+|-=.+ ......+.| ..|.-+ .|||+.++|++
T Consensus 214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~------------------f~r~~RF~H-p~Vq~i-------dfSP~EkYLVT 266 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQG-IALWGGES------------------FDRIQRFYH-PGVQFI-------DFSPNEKYLVT 266 (698)
T ss_pred eeEEecCCceEEEEEeccc-eeeecCcc------------------HHHHHhccC-CCceee-------ecCCccceEEE
Confidence 5689999999999988765 78994321 111122222 223333 44788888887
Q ss_pred EeC-----------CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeee
Q 022019 144 TTR-----------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 144 ~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~ 212 (304)
=+. ...++|||+.+|.....+........ .-.-+.||.|++++|.-....|.||+... .
T Consensus 267 ~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~--~WP~frWS~DdKy~Arm~~~sisIyEtps--------f 336 (698)
T KOG2314|consen 267 YSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYL--KWPIFRWSHDDKYFARMTGNSISIYETPS--------F 336 (698)
T ss_pred ecCCccccCcccCCCceEEEEEccccchhcceeccCCCcc--ccceEEeccCCceeEEeccceEEEEecCc--------e
Confidence 643 25799999999998888876432111 12347899999999965558899998754 1
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecC-----CeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEe
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-----QTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTG 283 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 283 (304)
.+.....-.-..|....|+| .+.+||-=+.. ..+.+..+.+++.+.+-.-+.-.=..+.|-.+|.+|+.-
T Consensus 337 ~lld~Kslki~gIr~FswsP-~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvk 411 (698)
T KOG2314|consen 337 MLLDKKSLKISGIRDFSWSP-TSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVK 411 (698)
T ss_pred eeecccccCCccccCcccCC-CcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEE
Confidence 11111112234488899999 67677653321 246667777776666665554333456777888888753
No 305
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.84 E-value=4.8e-06 Score=68.95 Aligned_cols=75 Identities=20% Similarity=0.257 Sum_probs=61.9
Q ss_pred ccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 220 ~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
.....+.+++++| ....++.|+.||.|.+||...+... +....-..+.++|+|+|..+++|+ ..|.+.+||+.-.
T Consensus 257 pL~s~v~~ca~sp-~E~kLvlGC~DgSiiLyD~~~~~t~--~~ka~~~P~~iaWHp~gai~~V~s-~qGelQ~FD~ALs 331 (545)
T PF11768_consen 257 PLPSQVICCARSP-SEDKLVLGCEDGSIILYDTTRGVTL--LAKAEFIPTLIAWHPDGAIFVVGS-EQGELQCFDMALS 331 (545)
T ss_pred ecCCcceEEecCc-ccceEEEEecCCeEEEEEcCCCeee--eeeecccceEEEEcCCCcEEEEEc-CCceEEEEEeecC
Confidence 4566799999999 7789999999999999998766433 223445678999999999999999 8999999998643
No 306
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.81 E-value=1.3e-05 Score=61.82 Aligned_cols=192 Identities=17% Similarity=0.171 Sum_probs=111.4
Q ss_pred CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCE
Q 022019 71 DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPI 150 (304)
Q Consensus 71 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i 150 (304)
++.++++++.++.+..||..+++............ .. | ...+..++++..++.+
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~--------------~~-------~-----~~~~~~v~v~~~~~~l 88 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPIS--------------GA-------P-----VVDGGRVYVGTSDGSL 88 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGG--------------SG-------E-----EEETTEEEEEETTSEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeecccccc--------------ce-------e-----eecccccccccceeee
Confidence 56677777899999999998876543322211000 00 0 1134456666688899
Q ss_pred EEEEcCCCeeeEEe-ecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeecccccccc-----
Q 022019 151 HLWDATTGLLRCTY-RAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG----- 223 (304)
Q Consensus 151 ~i~d~~~~~~~~~~-~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~----- 223 (304)
+.+|..+|+..... ................+. +..++++ .++.|..+|++++.... ...........
T Consensus 89 ~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~l~~~d~~tG~~~w----~~~~~~~~~~~~~~~~ 162 (238)
T PF13360_consen 89 YALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVD--GDRLYVGTSSGKLVALDPKTGKLLW----KYPVGEPRGSSPISSF 162 (238)
T ss_dssp EEEETTTSCEEEEEEE-SSCTCSTB--SEEEEE--TTEEEEEETCSEEEEEETTTTEEEE----EEESSTT-SS--EEEE
T ss_pred EecccCCcceeeeeccccccccccccccCceEe--cCEEEEEeccCcEEEEecCCCcEEE----EeecCCCCCCcceeee
Confidence 99999999988774 322110000111223322 6666655 79999999998753211 11111100001
Q ss_pred --ceeEEEeecCCCcEEEEEecCCe-EEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 224 --IMSAIAFSPTHTGMLAIGSYSQT-SAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 224 --~v~~~~~~p~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
....+.+. ++ .++.++.++. +.+ |+.+++.+.... ...+..+ ..+++..|+.++ .++.|..||+++|+.
T Consensus 163 ~~~~~~~~~~--~~-~v~~~~~~g~~~~~-d~~tg~~~w~~~--~~~~~~~-~~~~~~~l~~~~-~~~~l~~~d~~tG~~ 234 (238)
T PF13360_consen 163 SDINGSPVIS--DG-RVYVSSGDGRVVAV-DLATGEKLWSKP--ISGIYSL-PSVDGGTLYVTS-SDGRLYALDLKTGKV 234 (238)
T ss_dssp TTEEEEEECC--TT-EEEEECCTSSEEEE-ETTTTEEEEEEC--SS-ECEC-EECCCTEEEEEE-TTTEEEEEETTTTEE
T ss_pred cccccceEEE--CC-EEEEEcCCCeEEEE-ECCCCCEEEEec--CCCccCC-ceeeCCEEEEEe-CCCEEEEEECCCCCE
Confidence 11233333 33 6666777775 555 999998664333 2223331 346788899888 899999999999987
Q ss_pred ee
Q 022019 301 VV 302 (304)
Q Consensus 301 ~~ 302 (304)
+-
T Consensus 235 ~W 236 (238)
T PF13360_consen 235 VW 236 (238)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 307
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.77 E-value=2.9e-07 Score=72.20 Aligned_cols=82 Identities=23% Similarity=0.447 Sum_probs=64.5
Q ss_pred EEeecCCeEEEEeecCccceeCCCcc-EEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcE-EEEE
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPTSC-VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTK-IFAG 191 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-l~~~ 191 (304)
+...++..|.+++| +|..+ ++..++.+..|+|.|+++...+..+..+. .+++++|+-+... |++|
T Consensus 188 ~lp~~g~~Irdlaf-------Sp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~------~~wSC~wDlde~h~IYaG 254 (463)
T KOG1645|consen 188 ILPGEGSFIRDLAF-------SPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYN------QIWSCCWDLDERHVIYAG 254 (463)
T ss_pred cccccchhhhhhcc-------CccccceeeeeccCceEEEEecccceeeeheeccC------CceeeeeccCCcceeEEe
Confidence 44455566777766 55555 78899999999999999988888777664 8999999987654 5588
Q ss_pred -cCCeEEEEEcCCCCccc
Q 022019 192 -YNKSVRVFDVHRPGRDF 208 (304)
Q Consensus 192 -~d~~i~v~d~~~~~~~~ 208 (304)
..|.|.|||++.++..+
T Consensus 255 l~nG~VlvyD~R~~~~~~ 272 (463)
T KOG1645|consen 255 LQNGMVLVYDMRQPEGPL 272 (463)
T ss_pred ccCceEEEEEccCCCchH
Confidence 99999999999865443
No 308
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=98.75 E-value=1.5e-06 Score=76.09 Aligned_cols=147 Identities=15% Similarity=0.248 Sum_probs=101.2
Q ss_pred CccEEEEE-eCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCC-------CcEEEEE-cCCeEEEEEcCCCCcc
Q 022019 137 TSCVFAST-TRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT-------GTKIFAG-YNKSVRVFDVHRPGRD 207 (304)
Q Consensus 137 ~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-------~~~l~~~-~d~~i~v~d~~~~~~~ 207 (304)
+.++|+.. .....|+-.|+..|+.+..+..+... +|..+ .|+ ....+.| .+..+..||.|..+..
T Consensus 492 d~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~----~v~~~--~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k 565 (794)
T PF08553_consen 492 DRNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDI----PVVDI--APDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNK 565 (794)
T ss_pred ccceEeecCCCCCceEEEecCCCcEEEEeecCCCc----ceeEe--cccccccccCCCceEEEECCCceEEeccCCCCCc
Confidence 34444443 34578999999999999999987642 24443 342 2233455 8899999999975422
Q ss_pred ceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccC
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKD 287 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d 287 (304)
.. .. ...........+|++-+. +| +||+|+.+|.||+||--..+.-..+.+-..+|.+|..+.||+||++.+ +
T Consensus 566 ~v--~~-~~k~Y~~~~~Fs~~aTt~-~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc--~ 638 (794)
T PF08553_consen 566 LV--DS-QSKQYSSKNNFSCFATTE-DG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATC--K 638 (794)
T ss_pred ee--ec-cccccccCCCceEEEecC-Cc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEee--c
Confidence 11 10 011122334477887776 44 899999999999999533334445667788999999999999999887 7
Q ss_pred CeEEEEecc
Q 022019 288 PYILCWDLR 296 (304)
Q Consensus 288 ~~i~vwd~~ 296 (304)
..|.|++..
T Consensus 639 tyLlLi~t~ 647 (794)
T PF08553_consen 639 TYLLLIDTL 647 (794)
T ss_pred ceEEEEEEe
Confidence 788888863
No 309
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.71 E-value=1.2e-05 Score=62.03 Aligned_cols=150 Identities=17% Similarity=0.146 Sum_probs=90.8
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeec
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKG 216 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 216 (304)
++..+++++.++.++.||..+|+............. . ....++..++...++.++.+|..++...........
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~--~----~~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~- 107 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISG--A----PVVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSS- 107 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGS--G----EEEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SS-
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccc--e----eeecccccccccceeeeEecccCCcceeeeeccccc-
Confidence 455677778999999999999998887776432111 1 122234444455788999999877543222111100
Q ss_pred cccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCC----------e-EEEEECCCCcEEEEeec
Q 022019 217 NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGG----------V-THVQFSRDGNYLYTGGR 285 (304)
Q Consensus 217 ~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~~~ 285 (304)
............+. +..++++..++.|..+|+++++.+......... + ..+.+. ++ .++.++
T Consensus 108 -~~~~~~~~~~~~~~---~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~v~~~~- 180 (238)
T PF13360_consen 108 -PPAGVRSSSSPAVD---GDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVIS-DG-RVYVSS- 180 (238)
T ss_dssp -CTCSTB--SEEEEE---TTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECC-TT-EEEEEC-
T ss_pred -cccccccccCceEe---cCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEE-CC-EEEEEc-
Confidence 00011111222222 447778888999999999999998887654322 1 233333 45 666666
Q ss_pred cCCe-EEEEecccceee
Q 022019 286 KDPY-ILCWDLRKAVQV 301 (304)
Q Consensus 286 ~d~~-i~vwd~~~~~~~ 301 (304)
.++. +.+ |+.+++.+
T Consensus 181 ~~g~~~~~-d~~tg~~~ 196 (238)
T PF13360_consen 181 GDGRVVAV-DLATGEKL 196 (238)
T ss_dssp CTSSEEEE-ETTTTEEE
T ss_pred CCCeEEEE-ECCCCCEE
Confidence 6775 555 99998754
No 310
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.68 E-value=1.7e-06 Score=68.07 Aligned_cols=83 Identities=12% Similarity=0.234 Sum_probs=63.0
Q ss_pred eeeeecCCCCceeEEEEcCCCC-eEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 52 QFRTSSIPNNFLKGIKWSPDGS-SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 52 ~~~~~~~h~~~V~~i~~s~~~~-~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
....+.+|...|.+++|||..+ ++..++.+..|+|.|+.+...... ......+++++|.-.
T Consensus 185 ssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vss------------------y~a~~~~wSC~wDld 246 (463)
T KOG1645|consen 185 SSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSS------------------YIAYNQIWSCCWDLD 246 (463)
T ss_pred hhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeh------------------eeccCCceeeeeccC
Confidence 3446678889999999999766 788899999999999986533211 122278899999432
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCC
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTG 158 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 158 (304)
+.+++..|...|.|.+||++..
T Consensus 247 ------e~h~IYaGl~nG~VlvyD~R~~ 268 (463)
T KOG1645|consen 247 ------ERHVIYAGLQNGMVLVYDMRQP 268 (463)
T ss_pred ------CcceeEEeccCceEEEEEccCC
Confidence 3567888889999999999853
No 311
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.68 E-value=8e-06 Score=72.97 Aligned_cols=178 Identities=16% Similarity=0.211 Sum_probs=100.7
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcccccc--------ccccccCCccceEEEeec------------
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNA--------CSLAKDQDSYEASLVVTE------------ 118 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~------------ 118 (304)
-.+.|.+++||||+..++..+.++++.+-+-. ......... .....+-......+....
T Consensus 108 vd~GI~aaswS~Dee~l~liT~~~tll~mT~~-f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~e 186 (1265)
T KOG1920|consen 108 VDNGISAASWSPDEELLALITGRQTLLFMTKD-FEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKE 186 (1265)
T ss_pred ccCceEEEeecCCCcEEEEEeCCcEEEEEecc-ccchhccccccccccccccceecccccceeeecchhhhccccccccc
Confidence 46789999999999999988888887765431 111000000 000000000001111000
Q ss_pred --------CCeEEEEeecCccceeCCCccEEEEE-----eCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCC
Q 022019 119 --------GESVYDFCWFPHMSASDPTSCVFAST-----TRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG 185 (304)
Q Consensus 119 --------~~~v~~~~~~~~~~~~~~~~~~l~~~-----~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 185 (304)
...-..++| -.||+++++. ...+.|++||-+ |.....-..... .-.+++|-|.|
T Consensus 187 k~~~~~~~~~~~~~IsW-------RgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~-----l~~~LsWkPsg 253 (1265)
T KOG1920|consen 187 KALEQIEQDDHKTSISW-------RGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEG-----LQHSLSWKPSG 253 (1265)
T ss_pred ccccchhhccCCceEEE-------ccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCcccc-----cccceeecCCC
Confidence 011123444 6689888883 333789999976 543332222111 23489999999
Q ss_pred cEEEE----EcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEE---EecCCeEEEEecCCce
Q 022019 186 TKIFA----GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAI---GSYSQTSAIYREDNME 256 (304)
Q Consensus 186 ~~l~~----~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~---~~~dg~i~i~d~~~~~ 256 (304)
..+++ +.|+.|.+|.-+... ...+..........+..++|+. ++.+|++ ......|++|-+.+..
T Consensus 254 s~iA~iq~~~sd~~IvffErNGL~-----hg~f~l~~p~de~~ve~L~Wns-~sdiLAv~~~~~e~~~v~lwt~~Nyh 325 (1265)
T KOG1920|consen 254 SLIAAIQCKTSDSDIVFFERNGLR-----HGEFVLPFPLDEKEVEELAWNS-NSDILAVVTSNLENSLVQLWTTGNYH 325 (1265)
T ss_pred CeEeeeeecCCCCcEEEEecCCcc-----ccccccCCcccccchheeeecC-CCCceeeeecccccceEEEEEecCeE
Confidence 99994 266779998764321 1212222233334489999999 7778887 4445569999887653
No 312
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.66 E-value=6.5e-06 Score=68.16 Aligned_cols=190 Identities=11% Similarity=0.049 Sum_probs=105.8
Q ss_pred CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCE
Q 022019 71 DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPI 150 (304)
Q Consensus 71 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i 150 (304)
.+..+++++.+|.|..+|..+++......... .+. -.| ..++..+++++.+|.+
T Consensus 64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~------------------~~~---~~p-----~v~~~~v~v~~~~g~l 117 (377)
T TIGR03300 64 AGGKVYAADADGTVVALDAETGKRLWRVDLDE------------------RLS---GGV-----GADGGLVFVGTEKGEV 117 (377)
T ss_pred ECCEEEEECCCCeEEEEEccCCcEeeeecCCC------------------Ccc---cce-----EEcCCEEEEEcCCCEE
Confidence 46688888889999999988876543322111 000 001 1145577788889999
Q ss_pred EEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEe
Q 022019 151 HLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAF 230 (304)
Q Consensus 151 ~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 230 (304)
+.+|..+|+......... .+.+...-.++..++...++.++.||.+++....+... ......... ..+...
T Consensus 118 ~ald~~tG~~~W~~~~~~------~~~~~p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~--~~~~~~~~~-~~sp~~ 188 (377)
T TIGR03300 118 IALDAEDGKELWRAKLSS------EVLSPPLVANGLVVVRTNDGRLTALDAATGERLWTYSR--VTPALTLRG-SASPVI 188 (377)
T ss_pred EEEECCCCcEeeeeccCc------eeecCCEEECCEEEEECCCCeEEEEEcCCCceeeEEcc--CCCceeecC-CCCCEE
Confidence 999999998876655432 11111111134444445899999999987533222110 000000000 011112
Q ss_pred ecCCCcEEEEEecCCeEEEEecCCceEeEEeccccC----C---e----EEEEECCCCcEEEEeeccCCeEEEEecccce
Q 022019 231 SPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEG----G---V----THVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 231 ~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~---v----~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
. ++ .++.+..+|.+..+|.++++.+........ . + .+..+ .+..+++++ .+|.++.||..+|+
T Consensus 189 ~--~~-~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~--~~~~vy~~~-~~g~l~a~d~~tG~ 262 (377)
T TIGR03300 189 A--DG-GVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVV--DGGQVYAVS-YQGRVAALDLRSGR 262 (377)
T ss_pred E--CC-EEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEE--ECCEEEEEE-cCCEEEEEECCCCc
Confidence 2 22 567788889999999988876654321100 0 0 01111 244566666 67778888877775
Q ss_pred ee
Q 022019 300 QV 301 (304)
Q Consensus 300 ~~ 301 (304)
.+
T Consensus 263 ~~ 264 (377)
T TIGR03300 263 VL 264 (377)
T ss_pred EE
Confidence 43
No 313
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=98.64 E-value=1.5e-08 Score=83.75 Aligned_cols=205 Identities=15% Similarity=0.210 Sum_probs=129.8
Q ss_pred CCceeEEEEcCCCC--eEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC
Q 022019 60 NNFLKGIKWSPDGS--SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (304)
Q Consensus 60 ~~~V~~i~~s~~~~--~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (304)
...+.|+++.-+.+ .++.|..+|.|.+-.++...-. ...+..++..+.++++|.+. |
T Consensus 56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdS---------------s~E~tp~~ar~Ct~lAwneL------D 114 (783)
T KOG1008|consen 56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDS---------------SAEVTPGYARPCTSLAWNEL------D 114 (783)
T ss_pred CCCceeehhhcCCchhhhhhccccCceEEeecCCcccc---------------cceecccccccccccccccc------c
Confidence 44578888876443 6788889999999887643221 11133334467788888654 5
Q ss_pred ccEEEEEe----CCCCEEEEEcCCC--eeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCcccee
Q 022019 138 SCVFASTT----RDHPIHLWDATTG--LLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 138 ~~~l~~~~----~dg~i~i~d~~~~--~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~ 210 (304)
.++||+|- .|..+.|||+.++ .+........ .......+++|..+.+.+.+| ....+.++|+|..-.....
T Consensus 115 tn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~--~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~s 192 (783)
T KOG1008|consen 115 TNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSS--STLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSS 192 (783)
T ss_pred HHHHHhhhhhhcccCCccceecccccCCCcccccccc--ccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhh
Confidence 56777773 3678999999876 2222222222 122255688999888888888 7789999999842111111
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEe-cCCce-EeEEeccccC----CeEEEEECCCCc-EEEEe
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYR-EDNME-LLYVLHGQEG----GVTHVQFSRDGN-YLYTG 283 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d-~~~~~-~~~~~~~~~~----~v~~~~~~~~~~-~l~~~ 283 (304)
+ ....+..+..+|-.+.+++ ...||.|.+|| .++-+ ++..+...+. .+..++|.|..+ .+++.
T Consensus 193 v---------nTk~vqG~tVdp~~~nY~c-s~~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l 262 (783)
T KOG1008|consen 193 V---------NTKYVQGITVDPFSPNYFC-SNSDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVL 262 (783)
T ss_pred h---------hhhhcccceecCCCCCcee-ccccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhh
Confidence 1 1223566777774444555 45599999999 44332 3333332222 489999999653 46666
Q ss_pred eccCCeEEEEeccc
Q 022019 284 GRKDPYILCWDLRK 297 (304)
Q Consensus 284 ~~~d~~i~vwd~~~ 297 (304)
.+..++|+++++..
T Consensus 263 ~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 263 SRDSITIRLYDICV 276 (783)
T ss_pred ccCcceEEEecccc
Confidence 66788999999853
No 314
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.64 E-value=2.6e-06 Score=68.99 Aligned_cols=202 Identities=11% Similarity=0.158 Sum_probs=128.5
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
.+-++..++|||.|.+|++....| |.+|.-..... ...+.| ..|+.+.| +|++
T Consensus 31 ~~~p~~~~~~SP~G~~l~~~~~~~-V~~~~g~~~~~------------------l~~~~~-~~V~~~~f-------SP~~ 83 (561)
T COG5354 31 ENWPVAYVSESPLGTYLFSEHAAG-VECWGGPSKAK------------------LVRFRH-PDVKYLDF-------SPNE 83 (561)
T ss_pred cCcchhheeecCcchheehhhccc-eEEccccchhh------------------eeeeec-CCceeccc-------Cccc
Confidence 556789999999999999877664 88997553221 122222 34555544 7888
Q ss_pred cEEEEEeCCC---------------CEEEEEcCCCeeeEEeecccccccccceE-EEEECCCCcEEEEEcCCeEEEEEcC
Q 022019 139 CVFASTTRDH---------------PIHLWDATTGLLRCTYRAYDAVDEITAAF-SVAFNPTGTKIFAGYNKSVRVFDVH 202 (304)
Q Consensus 139 ~~l~~~~~dg---------------~i~i~d~~~~~~~~~~~~~~~~~~~~~v~-~i~~~~~~~~l~~~~d~~i~v~d~~ 202 (304)
++|.+-+..+ .+.+||+.+|..+..+....... ..+ -+.|+-+.+++|--....++|+++
T Consensus 84 kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~---~~Wp~~k~s~~D~y~ARvv~~sl~i~e~- 159 (561)
T COG5354 84 KYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPY---LGWPVLKFSIDDKYVARVVGSSLYIHEI- 159 (561)
T ss_pred ceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcc---cccceeeeeecchhhhhhccCeEEEEec-
Confidence 8888876543 49999999999988887665411 133 678888888888225567999997
Q ss_pred CCCccceeeeeeeccccccccceeEEEeecC-CCcEEEE-----EecCCeEEEEecCCceEeEEeccccCCeEEEEECCC
Q 022019 203 RPGRDFEKYSTLKGNKEGQAGIMSAIAFSPT-HTGMLAI-----GSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRD 276 (304)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~~l~~-----~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~ 276 (304)
+..-....+..+ ....+....|+|- ++..|+. ....+.+++|.+..+..+.+-.-..-.=..+.|.+.
T Consensus 160 t~n~~~~p~~~l------r~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~ 233 (561)
T COG5354 160 TDNIEEHPFKNL------RPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVL 233 (561)
T ss_pred CCccccCchhhc------cccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecC
Confidence 322111111111 1234788899993 2223332 345778999999877666554433333356889999
Q ss_pred CcEEEEeec----------cCCeEEEEeccc
Q 022019 277 GNYLYTGGR----------KDPYILCWDLRK 297 (304)
Q Consensus 277 ~~~l~~~~~----------~d~~i~vwd~~~ 297 (304)
|.+|+.--. ....++++++..
T Consensus 234 g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e 264 (561)
T COG5354 234 GKYLLVLVMTHTKSNKSYFGESNLYLLRITE 264 (561)
T ss_pred CceEEEEEEEeeecccceeccceEEEEeecc
Confidence 988764320 124577777653
No 315
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=98.63 E-value=4.7e-06 Score=71.04 Aligned_cols=105 Identities=13% Similarity=0.146 Sum_probs=79.5
Q ss_pred EEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE----c------CCeEEEEEcCCCCccce
Q 022019 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG----Y------NKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~----~------d~~i~v~d~~~~~~~~~ 209 (304)
+++.|...|+|.++|+.++.....+..|.. .|.++.|-...+++..+ . -+.+.+-|++++-.
T Consensus 439 LvAvGT~sGTV~vvdvst~~v~~~fsvht~-----~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGls--- 510 (1062)
T KOG1912|consen 439 LVAVGTNSGTVDVVDVSTNAVAASFSVHTS-----LVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLS--- 510 (1062)
T ss_pred eEEeecCCceEEEEEecchhhhhhhccccc-----ceeeeeeccceeEEEeeeccccccccceeeeEEEEEcccccc---
Confidence 588899999999999999988777777665 88999998766665522 1 13467888887522
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~ 255 (304)
..+.........+|+.+..+. .+.+++..-.+.-+.+||+++.
T Consensus 511 --k~fR~l~~~despI~~irvS~-~~~yLai~Fr~~plEiwd~kt~ 553 (1062)
T KOG1912|consen 511 --KRFRGLQKPDESPIRAIRVSS-SGRYLAILFRREPLEIWDLKTL 553 (1062)
T ss_pred --cccccCCCCCcCcceeeeecc-cCceEEEEecccchHHHhhccc
Confidence 222222355677899999999 8889999999999999998644
No 316
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.61 E-value=5.3e-05 Score=59.68 Aligned_cols=210 Identities=14% Similarity=0.132 Sum_probs=117.4
Q ss_pred eEEEEcCCCCeEEEe--cCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEE
Q 022019 64 KGIKWSPDGSSFLTS--SEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF 141 (304)
Q Consensus 64 ~~i~~s~~~~~l~s~--~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 141 (304)
..++++.||++++.. +---+|.|-|+...+...++... ....- .| + ..+-|
T Consensus 98 ~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~P------------------GC~~i---yP-----~-~~~~F 150 (342)
T PF06433_consen 98 NMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTP------------------GCWLI---YP-----S-GNRGF 150 (342)
T ss_dssp GGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGT------------------SEEEE---EE-----E-ETTEE
T ss_pred cceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCC------------------CEEEE---Ee-----c-CCCce
Confidence 346778888877654 33456888888765443222211 11111 11 1 12347
Q ss_pred EEEeCCCCEEEEEcC-CCeeeEEeecccccccccceEEEEECC-CCcEEEEEcCCeEEEEEcCCCCccceeeeeeeccc-
Q 022019 142 ASTTRDHPIHLWDAT-TGLLRCTYRAYDAVDEITAAFSVAFNP-TGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNK- 218 (304)
Q Consensus 142 ~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~- 218 (304)
.+.+.||++.-..+. .|+........-.......+..-++.. .+.+++.+.+|.|+-.|+......+..-..+....
T Consensus 151 ~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e 230 (342)
T PF06433_consen 151 SMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAE 230 (342)
T ss_dssp EEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHH
T ss_pred EEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccc
Confidence 788899999999887 455543322111111111222334444 34566699999999999976543222111111000
Q ss_pred ---cccccceeEEEeecCCCcEEEEEec--CC-------eEEEEecCCceEeEEeccccCCeEEEEECCCCc-EEEEeec
Q 022019 219 ---EGQAGIMSAIAFSPTHTGMLAIGSY--SQ-------TSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN-YLYTGGR 285 (304)
Q Consensus 219 ---~~~~~~v~~~~~~p~~~~~l~~~~~--dg-------~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~ 285 (304)
.-..+...-+++++..+++++.-.. +| .|.+||+.+++.+..+.. ..++.++..+.+.+ +|++.+.
T Consensus 231 ~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~ 309 (342)
T PF06433_consen 231 KADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSA 309 (342)
T ss_dssp HHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEEET
T ss_pred cccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEEEcC
Confidence 0012234568888745544443221 11 488999999999999984 34677999988765 6666543
Q ss_pred cCCeEEEEecccceee
Q 022019 286 KDPYILCWDLRKAVQV 301 (304)
Q Consensus 286 ~d~~i~vwd~~~~~~~ 301 (304)
.++.|.+||..+|+.+
T Consensus 310 ~~~~l~v~D~~tGk~~ 325 (342)
T PF06433_consen 310 GDGTLDVYDAATGKLV 325 (342)
T ss_dssp TTTEEEEEETTT--EE
T ss_pred CCCeEEEEeCcCCcEE
Confidence 6899999999999765
No 317
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.61 E-value=4.4e-07 Score=74.87 Aligned_cols=76 Identities=12% Similarity=0.195 Sum_probs=61.4
Q ss_pred cCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCC
Q 022019 57 SIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP 136 (304)
Q Consensus 57 ~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 136 (304)
-.....|.|.+++|+.+.|+.|+.||+|.+||...+.. ......+.|..++++|
T Consensus 256 ipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t--------------------------~~~ka~~~P~~iaWHp 309 (545)
T PF11768_consen 256 IPLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVT--------------------------LLAKAEFIPTLIAWHP 309 (545)
T ss_pred EecCCcceEEecCcccceEEEEecCCeEEEEEcCCCee--------------------------eeeeecccceEEEEcC
Confidence 35778899999999999999999999999999864311 1123345566677789
Q ss_pred CccEEEEEeCCCCEEEEEcCCC
Q 022019 137 TSCVFASTTRDHPIHLWDATTG 158 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~ 158 (304)
+|..+++|+..|.+.+||+.-.
T Consensus 310 ~gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 310 DGAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred CCcEEEEEcCCceEEEEEeecC
Confidence 9999999999999999998643
No 318
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.61 E-value=1.5e-06 Score=69.31 Aligned_cols=243 Identities=13% Similarity=0.112 Sum_probs=152.3
Q ss_pred hhhcHHhhccccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecC-CCeEEEeeCCCCCCccc
Q 022019 19 TEVTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSE-DKTLRIFSLPENGISYD 97 (304)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~-dg~v~vwd~~~~~~~~~ 97 (304)
.+++.+++.++..+.|.. ....-..+ ...+..|.+.|.+++.+-+|.++.|.+. |..++++|+.+-....-
T Consensus 20 a~fiiqASlDGh~KFWkK-----s~isGvEf---VKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~Dminm 91 (558)
T KOG0882|consen 20 AKFIIQASLDGHKKFWKK-----SRISGVEF---VKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINM 91 (558)
T ss_pred hheEEeeecchhhhhcCC-----CCccceee---hhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhh
Confidence 445556677777777742 11111111 2245678999999999999999999877 99999999986544222
Q ss_pred cccccccccCCccceEEEeecCCeEEEEeecCcccee-CCCc----cEEEEEeCCCCEEEEEcCCCeee-EEeecccccc
Q 022019 98 VNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS-DPTS----CVFASTTRDHPIHLWDATTGLLR-CTYRAYDAVD 171 (304)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~----~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~ 171 (304)
+... +.|..+.+ ...| .+-++.-.+|.+.++|-....+. ..+.. -
T Consensus 92 iKL~-------------------------~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkk----l 142 (558)
T KOG0882|consen 92 IKLV-------------------------DLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKK----L 142 (558)
T ss_pred cccc-------------------------cCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecc----c
Confidence 1111 11111111 1111 23334456789999997654322 21111 2
Q ss_pred cccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccce--eee-----eeeccccccccceeEEEeecCCCcEEEEEec
Q 022019 172 EITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFE--KYS-----TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY 243 (304)
Q Consensus 172 ~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~--~~~-----~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~ 243 (304)
|..+|..+.+++.+..+.+. ..|.|.-|.....-...+ ... +.............++.|+| .+..+.+-+.
T Consensus 143 H~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp-~g~qistl~~ 221 (558)
T KOG0882|consen 143 HFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSP-DGAQISTLNP 221 (558)
T ss_pred ccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEcc-ccCcccccCc
Confidence 33499999999999888876 889999999863100000 000 00111123345578999999 7778888889
Q ss_pred CCeEEEEecCCceEeEEecc--------------------------------cc-CCeEEEEECCCCcEEEEeeccCCeE
Q 022019 244 SQTSAIYREDNMELLYVLHG--------------------------------QE-GGVTHVQFSRDGNYLYTGGRKDPYI 290 (304)
Q Consensus 244 dg~i~i~d~~~~~~~~~~~~--------------------------------~~-~~v~~~~~~~~~~~l~~~~~~d~~i 290 (304)
|..|++++.++++.++.+.. |. ..-+.+.|...|++|+-+. .=| |
T Consensus 222 DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t-~~g-i 299 (558)
T KOG0882|consen 222 DRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGT-ILG-I 299 (558)
T ss_pred ccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeec-cee-E
Confidence 99999999988865544321 11 1345678888999998887 444 8
Q ss_pred EEEecccceee
Q 022019 291 LCWDLRKAVQV 301 (304)
Q Consensus 291 ~vwd~~~~~~~ 301 (304)
+|.++.++..+
T Consensus 300 kvin~~tn~v~ 310 (558)
T KOG0882|consen 300 KVINLDTNTVV 310 (558)
T ss_pred EEEEeecCeEE
Confidence 89998887654
No 319
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.60 E-value=2.6e-05 Score=64.63 Aligned_cols=147 Identities=14% Similarity=0.108 Sum_probs=87.4
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeeccccccc--ccceEEEEECC--CCcEEE-EEcCCeEEEEEcCCCCccceeeee
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDE--ITAAFSVAFNP--TGTKIF-AGYNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~--~~~v~~i~~~~--~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
..++.+..+|.+..+|+++|+............. ......+.-+| .+..++ ++.++.++.||..++.... .
T Consensus 191 ~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W----~ 266 (377)
T TIGR03300 191 GGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLW----K 266 (377)
T ss_pred CEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEE----e
Confidence 3577788889999999999987654432111000 00000011111 234455 5689999999997653211 1
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc-CCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE-GGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
.. ... ....... +..+++++.+|.+..+|..+++.+....... ....+... .+..|++++ .+|.|++
T Consensus 267 ~~--~~~----~~~p~~~---~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~-~~G~l~~ 334 (377)
T TIGR03300 267 RD--ASS----YQGPAVD---DNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGD-FEGYLHW 334 (377)
T ss_pred ec--cCC----ccCceEe---CCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEe-CCCEEEE
Confidence 11 011 1122222 3366777889999999999998776553211 12222222 366888888 9999999
Q ss_pred Eecccceee
Q 022019 293 WDLRKAVQV 301 (304)
Q Consensus 293 wd~~~~~~~ 301 (304)
+|..+|+.+
T Consensus 335 ~d~~tG~~~ 343 (377)
T TIGR03300 335 LSREDGSFV 343 (377)
T ss_pred EECCCCCEE
Confidence 999998765
No 320
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.54 E-value=3.1e-05 Score=69.45 Aligned_cols=203 Identities=11% Similarity=0.193 Sum_probs=128.1
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
..+.|.++.|-.++..++.+..+|.|.+-|..+.... +...-...|.+++| |||+
T Consensus 67 gd~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~e------------------ivg~vd~GI~aasw-------S~De 121 (1265)
T KOG1920|consen 67 GDDEIVSVQFLADTNSICVITALGDIILVDPETLELE------------------IVGNVDNGISAASW-------SPDE 121 (1265)
T ss_pred CCcceEEEEEecccceEEEEecCCcEEEEccccccee------------------eeeeccCceEEEee-------cCCC
Confidence 3468999999999998888889999999887755332 22223367788888 7899
Q ss_pred cEEEEEeCCCCEEEEEcC----CCeee-------------------EEeeccccc-------------c---cccceEEE
Q 022019 139 CVFASTTRDHPIHLWDAT----TGLLR-------------------CTYRAYDAV-------------D---EITAAFSV 179 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~----~~~~~-------------------~~~~~~~~~-------------~---~~~~v~~i 179 (304)
++++..+.++++.+-+-. ..+.. ..+.+..+. + -...=++|
T Consensus 122 e~l~liT~~~tll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~I 201 (1265)
T KOG1920|consen 122 ELLALITGRQTLLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSI 201 (1265)
T ss_pred cEEEEEeCCcEEEEEeccccchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceE
Confidence 999888888777654320 11110 111110000 0 00112469
Q ss_pred EECCCCcEEEE-----EcC-CeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEe---cCCeEEEE
Q 022019 180 AFNPTGTKIFA-----GYN-KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS---YSQTSAIY 250 (304)
Q Consensus 180 ~~~~~~~~l~~-----~~d-~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~---~dg~i~i~ 250 (304)
.|--||.++++ ..+ ..|+|||-+. .+........+.-.+++|-| .|.++++-. .|+.|.+|
T Consensus 202 sWRgDg~~fAVs~~~~~~~~RkirV~drEg---------~Lns~se~~~~l~~~LsWkP-sgs~iA~iq~~~sd~~Ivff 271 (1265)
T KOG1920|consen 202 SWRGDGEYFAVSFVESETGTRKIRVYDREG---------ALNSTSEPVEGLQHSLSWKP-SGSLIAAIQCKTSDSDIVFF 271 (1265)
T ss_pred EEccCCcEEEEEEEeccCCceeEEEecccc---------hhhcccCcccccccceeecC-CCCeEeeeeecCCCCcEEEE
Confidence 99999999995 245 7899999751 11111122223345899999 666777643 35679999
Q ss_pred ecCCceEeEE----eccccCCeEEEEECCCCcEEEE---eeccCCeEEEEecccc
Q 022019 251 REDNMELLYV----LHGQEGGVTHVQFSRDGNYLYT---GGRKDPYILCWDLRKA 298 (304)
Q Consensus 251 d~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~---~~~~d~~i~vwd~~~~ 298 (304)
.- +|-.-.. +......|..++|+.++..|+. .. ....|.+|-+.+-
T Consensus 272 Er-NGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~-e~~~v~lwt~~Ny 324 (1265)
T KOG1920|consen 272 ER-NGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNL-ENSLVQLWTTGNY 324 (1265)
T ss_pred ec-CCccccccccCCcccccchheeeecCCCCceeeeeccc-ccceEEEEEecCe
Confidence 84 4432222 2223345999999999999887 44 4555999988764
No 321
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.54 E-value=1.6e-05 Score=68.04 Aligned_cols=170 Identities=15% Similarity=0.111 Sum_probs=103.8
Q ss_pred ceeeeecCCCCceeEEEEcCC-------------CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEee
Q 022019 51 NQFRTSSIPNNFLKGIKWSPD-------------GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVT 117 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~~-------------~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (304)
.....+..|.+.|.-..+.-+ |.+++||+.||+|.|-.+.+.... ....
T Consensus 49 ~~~~~~GtH~g~v~~~~~~~~~~~~~~~s~~~~~Gey~asCS~DGkv~I~sl~~~~~~------------------~~~d 110 (846)
T KOG2066|consen 49 DKFFALGTHRGAVYLTTCQGNPKTNFDHSSSILEGEYVASCSDDGKVVIGSLFTDDEI------------------TQYD 110 (846)
T ss_pred cceeeeccccceEEEEecCCcccccccccccccCCceEEEecCCCcEEEeeccCCccc------------------eeEe
Confidence 334456778877777766555 999999999999999887654332 1222
Q ss_pred cCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCC-C-eeeEEeecccccccccceEEEEECCCCcEEEEEcCCe
Q 022019 118 EGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT-G-LLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKS 195 (304)
Q Consensus 118 ~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~-~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~ 195 (304)
-..++.+++++|.... ...+.+++|+..| +.++.-+= | +....+.. ..++|.++.|. |++||=..|-.
T Consensus 111 f~rpiksial~Pd~~~--~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~-----~eG~I~~i~W~--g~lIAWand~G 180 (846)
T KOG2066|consen 111 FKRPIKSIALHPDFSR--QQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSE-----GEGPIHSIKWR--GNLIAWANDDG 180 (846)
T ss_pred cCCcceeEEeccchhh--hhhhheeecCcce-EEEehhhhhcCccceeeec-----CccceEEEEec--CcEEEEecCCC
Confidence 3357777777665321 2356799999988 77765321 1 11111222 22389999997 77998667777
Q ss_pred EEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC
Q 022019 196 VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (304)
Q Consensus 196 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~ 253 (304)
|+|||+..... ...+..... ..........+.|.+ .. .|+.|= ..+|+|..++
T Consensus 181 v~vyd~~~~~~-l~~i~~p~~-~~R~e~fpphl~W~~-~~-~LVIGW-~d~v~i~~I~ 233 (846)
T KOG2066|consen 181 VKVYDTPTRQR-LTNIPPPSQ-SVRPELFPPHLHWQD-ED-RLVIGW-GDSVKICSIK 233 (846)
T ss_pred cEEEeccccce-eeccCCCCC-CCCcccCCCceEecC-CC-eEEEec-CCeEEEEEEe
Confidence 99999976422 111111111 111122245678887 33 455554 4478888876
No 322
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.51 E-value=1.7e-05 Score=65.76 Aligned_cols=189 Identities=16% Similarity=0.155 Sum_probs=103.7
Q ss_pred cCCCCceeEEEEcCCCCeEEEec---CC-CeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 57 SIPNNFLKGIKWSPDGSSFLTSS---ED-KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 57 ~~h~~~V~~i~~s~~~~~l~s~~---~d-g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
..-...+..-+|+|++..++... .. ..+.++++.++... .+..........
T Consensus 189 ~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~-------------------------~i~~~~g~~~~P 243 (425)
T COG0823 189 TDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRP-------------------------VILNFNGNNGAP 243 (425)
T ss_pred cccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccc-------------------------eeeccCCccCCc
Confidence 33455667778888887655432 22 35777887765432 111122222233
Q ss_pred eeCCCccEEEEEe-CCC--CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCcc
Q 022019 133 ASDPTSCVFASTT-RDH--PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRD 207 (304)
Q Consensus 133 ~~~~~~~~l~~~~-~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~ 207 (304)
+|+|||+.|+.+. .|| .|+++|+..+.... +..... .-..-.|+|||+.|+ ++ ..|.-.||-....+..
T Consensus 244 ~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~-Lt~~~g-----i~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~ 317 (425)
T COG0823 244 AFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPR-LTNGFG-----INTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQ 317 (425)
T ss_pred cCCCCCCEEEEEECCCCCccEEEEcCCCCccee-cccCCc-----cccCccCCCCCCEEEEEeCCCCCcceEEECCCCCc
Confidence 5689998776654 555 47777887776433 332221 222678999999999 55 6666555544433322
Q ss_pred ceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCe--EEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEee
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQT--SAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
...+ .. .... -..-.|+|++..+++....+|. |.+.|+.++..+..+. +........|.|+|+.+...+
T Consensus 318 ~~ri---T~--~~~~--~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt-~~~~~e~ps~~~ng~~i~~~s 388 (425)
T COG0823 318 VTRL---TF--SGGG--NSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILT-STYLNESPSWAPNGRMIMFSS 388 (425)
T ss_pred eeEe---ec--cCCC--CcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEcc-ccccCCCCCcCCCCceEEEec
Confidence 2211 11 1111 1266899954444444433454 7777776655444443 333445567777777665544
No 323
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.51 E-value=1.5e-05 Score=67.68 Aligned_cols=140 Identities=14% Similarity=0.072 Sum_probs=86.4
Q ss_pred CCCccEEEEEeCCCCEEEEEcCC-----CeeeEEeecccccccccceEEEEECCCCcEEEE-E-cCCeEEEEEcCCCCcc
Q 022019 135 DPTSCVFASTTRDHPIHLWDATT-----GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-G-YNKSVRVFDVHRPGRD 207 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~-----~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~-~d~~i~v~d~~~~~~~ 207 (304)
.++|++... .++.|.+.|..+ ......+.... ....+.++|||+++++ + .+.+|.|+|+.+....
T Consensus 285 vkdGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIPVGK------sPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~ 356 (635)
T PRK02888 285 VKAGKFKTI--GGSKVPVVDGRKAANAGSALTRYVPVPK------NPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDL 356 (635)
T ss_pred hhCCCEEEE--CCCEEEEEECCccccCCcceEEEEECCC------CccceEECCCCCEEEEeCCCCCcEEEEEChhhhhh
Confidence 345554444 246688888887 34444454443 6678999999999994 5 8999999999874321
Q ss_pred ce----eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC----------ceEeEEeccccCCeEE---
Q 022019 208 FE----KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN----------MELLYVLHGQEGGVTH--- 270 (304)
Q Consensus 208 ~~----~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~----------~~~~~~~~~~~~~v~~--- 270 (304)
+. .-..+.....--. .....+|++ .+..+.+-.-|..|..||+.. ...+..+..|-.+-.-
T Consensus 357 ~~~~~~~~~~vvaevevGl-GPLHTaFDg-~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~ 434 (635)
T PRK02888 357 FDGKIKPRDAVVAEPELGL-GPLHTAFDG-RGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHAS 434 (635)
T ss_pred hhccCCccceEEEeeccCC-CcceEEECC-CCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeec
Confidence 11 0011111111112 244678998 567888888899999999875 2345555544332211
Q ss_pred --EEECCCCcEEEEee
Q 022019 271 --VQFSRDGNYLYTGG 284 (304)
Q Consensus 271 --~~~~~~~~~l~~~~ 284 (304)
=.-.|||+||++..
T Consensus 435 ~g~t~~~dgk~l~~~n 450 (635)
T PRK02888 435 MGETKEADGKWLVSLN 450 (635)
T ss_pred CCCcCCCCCCEEEEcc
Confidence 12367888887765
No 324
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=98.50 E-value=0.0003 Score=58.19 Aligned_cols=203 Identities=17% Similarity=0.199 Sum_probs=131.6
Q ss_pred eeEEEEcCCCC-eEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEE
Q 022019 63 LKGIKWSPDGS-SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF 141 (304)
Q Consensus 63 V~~i~~s~~~~-~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 141 (304)
-..++.++.+. .+++...++.|.+.|........ ...+-..|..++++++++.+
T Consensus 76 p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~-------------------------~~~vG~~P~~~~~~~~~~~v 130 (381)
T COG3391 76 PAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLG-------------------------SIPVGLGPVGLAVDPDGKYV 130 (381)
T ss_pred ccceeeCCCCCeEEEecCCCCeEEEEcCcccceee-------------------------EeeeccCCceEEECCCCCEE
Confidence 34678888777 44455556889999855432211 11111266677779999777
Q ss_pred EEEeC---CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE--cCCeEEEEEcCCCCccceeeeeeec
Q 022019 142 ASTTR---DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG--YNKSVRVFDVHRPGRDFEKYSTLKG 216 (304)
Q Consensus 142 ~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~v~d~~~~~~~~~~~~~~~~ 216 (304)
.++.. ++++.+.|-.+.+.......... + ..++++|+|..+++. .++.|.++|...... .. ... .
T Consensus 131 YV~n~~~~~~~vsvid~~t~~~~~~~~vG~~-----P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v--~~-~~~-~ 200 (381)
T COG3391 131 YVANAGNGNNTVSVIDAATNKVTATIPVGNT-----P-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSV--VR-GSV-G 200 (381)
T ss_pred EEEecccCCceEEEEeCCCCeEEEEEecCCC-----c-ceEEECCCCCeEEEEecCCCeEEEEeCCCcce--ec-ccc-c
Confidence 66654 68899999888887776443321 3 789999999988854 689999999765211 10 000 0
Q ss_pred cccccccceeEEEeecCCCcEEEEEecC--CeEEEEecCCceEeEE-eccccCCeEEEEECCCCcEEEEeeccCCeEEEE
Q 022019 217 NKEGQAGIMSAIAFSPTHTGMLAIGSYS--QTSAIYREDNMELLYV-LHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCW 293 (304)
Q Consensus 217 ~~~~~~~~v~~~~~~p~~~~~l~~~~~d--g~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vw 293 (304)
...........+.++|++...+++...+ +.+...|..++..... +.........+..+|+|.++++.....+.+.+.
T Consensus 201 ~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vi 280 (381)
T COG3391 201 SLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVI 280 (381)
T ss_pred cccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEE
Confidence 0011222346789999555555555444 6899999988876655 222111457789999999999886355889998
Q ss_pred eccccee
Q 022019 294 DLRKAVQ 300 (304)
Q Consensus 294 d~~~~~~ 300 (304)
|..+...
T Consensus 281 d~~~~~v 287 (381)
T COG3391 281 DGATDRV 287 (381)
T ss_pred eCCCCce
Confidence 8877543
No 325
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.48 E-value=2e-05 Score=64.59 Aligned_cols=145 Identities=17% Similarity=0.255 Sum_probs=100.3
Q ss_pred EEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcE-------EEEE-cCCeEEEEEcCCCCccceee
Q 022019 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTK-------IFAG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-------l~~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
+|.++.....++-.|++.|+.+..+..+. .|.-+.+.|+.+. -+.| .+..|.-||.|..+....
T Consensus 348 il~~~~~~~~l~klDIE~GKIVeEWk~~~------di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl-- 419 (644)
T KOG2395|consen 348 ILMDGGEQDKLYKLDIERGKIVEEWKFED------DINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKL-- 419 (644)
T ss_pred EeeCCCCcCcceeeecccceeeeEeeccC------CcceeeccCCcchhcccccccEEeecCCceEEecccccCccee--
Confidence 34455555679999999999999998877 4566777776431 1235 889999999986543211
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEE
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYIL 291 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~ 291 (304)
...............|++-.. ..++++||.+|.|++||--....-..+++-..+|..+..+.+|++|++.+ +..|.
T Consensus 420 ~~~q~kqy~~k~nFsc~aTT~--sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc--~tyLl 495 (644)
T KOG2395|consen 420 AVVQSKQYSTKNNFSCFATTE--SGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATC--KTYLL 495 (644)
T ss_pred eeeeccccccccccceeeecC--CceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEec--ccEEE
Confidence 111111111222355555554 34899999999999999733334456778888999999999999999887 77888
Q ss_pred EEecc
Q 022019 292 CWDLR 296 (304)
Q Consensus 292 vwd~~ 296 (304)
+-++.
T Consensus 496 Li~t~ 500 (644)
T KOG2395|consen 496 LIDTL 500 (644)
T ss_pred EEEEe
Confidence 87764
No 326
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.45 E-value=8.6e-05 Score=56.24 Aligned_cols=147 Identities=14% Similarity=0.125 Sum_probs=91.9
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCC--eeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccce
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTG--LLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~ 209 (304)
+.+.+|++||+. .|..|-|-..++. ..+.....+... ...=..++|+||+..||.+ ..|+|++||+... ...
T Consensus 4 ~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~--~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~--~lf 78 (282)
T PF15492_consen 4 ALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDP--NPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGS--ELF 78 (282)
T ss_pred eecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCC--CchheEEEECCCCcEEEEEcCCCeEEEEecccc--eeE
Confidence 346788877765 5667777766543 223333333321 1144689999999999966 9999999999741 111
Q ss_pred eeeeeeccccccccceeEEEeecCC-----CcEEEEEecCCeEEEEecCC-----ceEeEEec---cccCCeEEEEECCC
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTH-----TGMLAIGSYSQTSAIYREDN-----MELLYVLH---GQEGGVTHVQFSRD 276 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~-----~~~l~~~~~dg~i~i~d~~~-----~~~~~~~~---~~~~~v~~~~~~~~ 276 (304)
.+.............|..+.|-+.. ...|++-..+|.++=|-+.. .+...++. .+...|.++.++|.
T Consensus 79 ~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~ 158 (282)
T PF15492_consen 79 VIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPK 158 (282)
T ss_pred EcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCC
Confidence 1111111112233557778776532 33677778888887776532 23333433 24668999999999
Q ss_pred CcEEEEee
Q 022019 277 GNYLYTGG 284 (304)
Q Consensus 277 ~~~l~~~~ 284 (304)
.+.|+.||
T Consensus 159 h~LLlVgG 166 (282)
T PF15492_consen 159 HRLLLVGG 166 (282)
T ss_pred CCEEEEec
Confidence 99988887
No 327
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=98.45 E-value=5.6e-08 Score=80.55 Aligned_cols=171 Identities=14% Similarity=0.251 Sum_probs=109.6
Q ss_pred eecCCCCceeEEEEcC-CCCeEEEec----CCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecC
Q 022019 55 TSSIPNNFLKGIKWSP-DGSSFLTSS----EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP 129 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~-~~~~l~s~~----~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 129 (304)
...+|....++++|++ |.+.||.|- .|-.+.|||+.+.-.... ....+ .........++||
T Consensus 97 ~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPk-e~~~f-----------s~~~l~gqns~cw-- 162 (783)
T KOG1008|consen 97 VTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPK-ESPLF-----------SSSTLDGQNSVCW-- 162 (783)
T ss_pred ecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCc-ccccc-----------ccccccCcccccc--
Confidence 4457888999999999 777888773 466799999986533111 11100 0011233346777
Q ss_pred ccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECC-CCcEEEEEcCCeEEEEEc-CCCCcc
Q 022019 130 HMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP-TGTKIFAGYNKSVRVFDV-HRPGRD 207 (304)
Q Consensus 130 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~d~~i~v~d~-~~~~~~ 207 (304)
-.+.+++.+|...+.++++|++....... .... ..+..+..+| .+.+++...||.|.+||. +.-+..
T Consensus 163 -----lrd~klvlaGm~sr~~~ifdlRqs~~~~~-svnT-----k~vqG~tVdp~~~nY~cs~~dg~iAiwD~~rnienp 231 (783)
T KOG1008|consen 163 -----LRDTKLVLAGMTSRSVHIFDLRQSLDSVS-SVNT-----KYVQGITVDPFSPNYFCSNSDGDIAIWDTYRNIENP 231 (783)
T ss_pred -----ccCcchhhcccccchhhhhhhhhhhhhhh-hhhh-----hhcccceecCCCCCceeccccCceeeccchhhhccH
Confidence 34777899999999999999984322111 1111 1566788899 788888778999999994 332222
Q ss_pred ceeeeeeeccccccccceeEEEeecCCCcEEEEEecC-CeEEEEecC
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-QTSAIYRED 253 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-g~i~i~d~~ 253 (304)
+. .+..........+..++|+|....++++.+.| ++|++||+.
T Consensus 232 l~---~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 232 LQ---IILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred HH---HHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 21 11111122233588999999766677777765 679999985
No 328
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=98.44 E-value=0.00034 Score=57.65 Aligned_cols=230 Identities=9% Similarity=0.071 Sum_probs=117.9
Q ss_pred ceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcc-cccccc-----------------------cccc-CCccceEEEe
Q 022019 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISY-DVNACS-----------------------LAKD-QDSYEASLVV 116 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~-~~~~~~-----------------------~~~~-~~~~~~~~~~ 116 (304)
.|+.+.|+++..-|+.|...|.|.||.+..++... ...... .... .........+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 48999999998889999999999999876543321 000000 0000 1112222222
Q ss_pred -ecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeeccc---ccccccceEEEEECC-----CC--
Q 022019 117 -TEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYD---AVDEITAAFSVAFNP-----TG-- 185 (304)
Q Consensus 117 -~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~~~~~~v~~i~~~~-----~~-- 185 (304)
....+|++++. | |=.++++|..+|.+.|.|++....+..-.... .......++++.|.- |+
T Consensus 83 ~~~~g~vtal~~-------S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~yS 154 (395)
T PF08596_consen 83 DAKQGPVTALKN-------S-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYS 154 (395)
T ss_dssp ---S-SEEEEEE---------BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSE
T ss_pred eccCCcEeEEec-------C-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCccc
Confidence 22456776664 2 44579999999999999998887766533322 111233577777752 33
Q ss_pred -cEEEEE-cCCeEEEEEcCC-CCccceeeeeeeccccccccceeEEE-eecCC-------------------CcEEEEEe
Q 022019 186 -TKIFAG-YNKSVRVFDVHR-PGRDFEKYSTLKGNKEGQAGIMSAIA-FSPTH-------------------TGMLAIGS 242 (304)
Q Consensus 186 -~~l~~~-~d~~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~-~~p~~-------------------~~~l~~~~ 242 (304)
-.+++| ..|.+.+|.+.- .+..+. ..+......+.+++..+. |+.+. -.-+++..
T Consensus 155 Si~L~vGTn~G~v~~fkIlp~~~g~f~--v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvv 232 (395)
T PF08596_consen 155 SICLLVGTNSGNVLTFKILPSSNGRFS--VQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVV 232 (395)
T ss_dssp EEEEEEEETTSEEEEEEEEE-GGG-EE--EEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE
T ss_pred ceEEEEEeCCCCEEEEEEecCCCCceE--EEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEE
Confidence 344466 889999998852 111111 111111123344444443 32211 01234444
Q ss_pred cCCeEEEEecCCceEeEEeccccCCeEEEEE-----CCCCcEEEEeeccCCeEEEEecccceeee
Q 022019 243 YSQTSAIYREDNMELLYVLHGQEGGVTHVQF-----SRDGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 243 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
.+..++++...+.+.........-....+.+ ...+..|++-. .+|.|+++.+-.-+.+.
T Consensus 233 Se~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~-~~G~i~i~SLP~Lkei~ 296 (395)
T PF08596_consen 233 SESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLF-NNGSIRIYSLPSLKEIK 296 (395)
T ss_dssp -SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEE-TTSEEEEEETTT--EEE
T ss_pred cccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEE-CCCcEEEEECCCchHhh
Confidence 5678999999887765554422223334444 23566677777 89999999998776653
No 329
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.43 E-value=5.3e-06 Score=71.97 Aligned_cols=151 Identities=11% Similarity=0.101 Sum_probs=103.9
Q ss_pred ceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEE
Q 022019 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF 141 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 141 (304)
.|+-|+. ++++|.+|...|+|.+-|..+.+...++. .|...+.++ +-.|++|
T Consensus 179 ~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~-----------------aHs~siSDf---------Dv~GNlL 230 (1118)
T KOG1275|consen 179 GVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFD-----------------AHSGSISDF---------DVQGNLL 230 (1118)
T ss_pred ceEEEEe--cCcEEEeecccceEEeecCCcCceeeeee-----------------ccccceeee---------eccCCeE
Confidence 3555554 57899999999999999988665544333 344556555 4478899
Q ss_pred EEEeC---------CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCC--CcEEEEEcCCeEEEEEcCCCCcccee
Q 022019 142 ASTTR---------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT--GTKIFAGYNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 142 ~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~--~~~l~~~~d~~i~v~d~~~~~~~~~~ 210 (304)
++++. |.-|+|||++.-+.+.-+..+.. ..-+.|+|. .+.++++..|...+-|....+.+...
T Consensus 231 itCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~------P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~ 304 (1118)
T KOG1275|consen 231 ITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYG------PQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAG 304 (1118)
T ss_pred EEeecccccccccccchhhhhhhhhhhccCCcccccC------chhhhhcccccceEEEEecccceeeccccccCCCccc
Confidence 98876 55689999998776655554442 245778885 33444679999999995443333222
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEe
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYR 251 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d 251 (304)
.... ......+.++++++ ++..++.|..+|.|.+|.
T Consensus 305 ~~~v----~p~~s~i~~fDiSs-n~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 305 VKMV----NPNGSGISAFDISS-NGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred eeEE----ccCCCcceeEEecC-CCceEEEecccCcEeeec
Confidence 2221 22334489999999 888999999999999997
No 330
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=98.42 E-value=5.6e-05 Score=62.15 Aligned_cols=223 Identities=13% Similarity=0.137 Sum_probs=113.9
Q ss_pred cceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecC
Q 022019 50 YNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP 129 (304)
Q Consensus 50 ~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 129 (304)
+.+...+....++|++++.|.=| ++|.|..+|.+.|.|++.....+...... ..........++++.|..
T Consensus 76 f~P~~l~~~~~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~i~~---------~~~~~~~~~~vt~ieF~v 145 (395)
T PF08596_consen 76 FLPLTLLDAKQGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNENIRE---------SFLSKSSSSYVTSIEFSV 145 (395)
T ss_dssp EEEEEEE---S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG-----------T-SS----EEEEEEEE
T ss_pred cCchhheeccCCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeeccccc---------cccccccccCeeEEEEEE
Confidence 34445666679999999998544 99999999999999998766544422211 001111224556666654
Q ss_pred ccceeCCCc---cEEEEEeCCCCEEEEEcC-C--CeeeEEeecccccccccceEEEE-ECCC-C----------------
Q 022019 130 HMSASDPTS---CVFASTTRDHPIHLWDAT-T--GLLRCTYRAYDAVDEITAAFSVA-FNPT-G---------------- 185 (304)
Q Consensus 130 ~~~~~~~~~---~~l~~~~~dg~i~i~d~~-~--~~~~~~~~~~~~~~~~~~v~~i~-~~~~-~---------------- 185 (304)
... ..|+ -.+++|...|.+.+|.+. . +.....+.... ..+...|..|. ++.+ |
T Consensus 146 m~~--~~D~ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~-~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g 222 (395)
T PF08596_consen 146 MTL--GGDGYSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGAT-TNHDSPILSIIPINADTGESALATISAMQGLSKG 222 (395)
T ss_dssp EE---TTSSSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE---SS----EEEEEETTT--B-B-BHHHHHGGGGT
T ss_pred Eec--CCCcccceEEEEEeCCCCEEEEEEecCCCCceEEEEeecc-ccCCCceEEEEEEECCCCCcccCchhHhhccccC
Confidence 222 2232 468889999999999875 1 21111111111 01112333333 3221 1
Q ss_pred ----cEEEEEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEee----cCCCcEEEEEecCCeEEEEecCCceE
Q 022019 186 ----TKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFS----PTHTGMLAIGSYSQTSAIYREDNMEL 257 (304)
Q Consensus 186 ----~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----p~~~~~l~~~~~dg~i~i~d~~~~~~ 257 (304)
.++++..+..++++..-+.....+ .+ ........+.+- ...+..|++-..+|.|++|.+-..+.
T Consensus 223 ~~i~g~vVvvSe~~irv~~~~~~k~~~K---~~-----~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lke 294 (395)
T PF08596_consen 223 ISIPGYVVVVSESDIRVFKPPKSKGAHK---SF-----DDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKE 294 (395)
T ss_dssp ----EEEEEE-SSEEEEE-TT---EEEE---E------SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--E
T ss_pred CCcCcEEEEEcccceEEEeCCCCcccce---ee-----ccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchH
Confidence 245566788899998865321111 11 111112333442 11566788889999999999999988
Q ss_pred eEEecccc----CCeEEEEECCCCcEEEEeeccCCeEEEEec
Q 022019 258 LYVLHGQE----GGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 258 ~~~~~~~~----~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
+..+.... ..+....++++|..++-.+ ...+.++.+
T Consensus 295 i~~~~l~~~~d~~~~~~ssis~~Gdi~~~~g--psE~~l~sv 334 (395)
T PF08596_consen 295 IKSVSLPPPLDSRRLSSSSISRNGDIFYWTG--PSEIQLFSV 334 (395)
T ss_dssp EEEEE-SS---HHHHTT-EE-TTS-EEEE-S--SSEEEEEEE
T ss_pred hhcccCCCccccccccccEECCCCCEEEEeC--cccEEEEEE
Confidence 88776432 2455677899999887776 444444443
No 331
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.41 E-value=1.6e-05 Score=65.97 Aligned_cols=152 Identities=19% Similarity=0.211 Sum_probs=93.3
Q ss_pred ceeCCCccEEEEEe---CC-CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCe--EEEEEcCC
Q 022019 132 SASDPTSCVFASTT---RD-HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKS--VRVFDVHR 203 (304)
Q Consensus 132 ~~~~~~~~~l~~~~---~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~--i~v~d~~~ 203 (304)
.+++|++..++..+ .. ..++++++.+++......... .-...+|+|||+.++ +. .||. |+++|+..
T Consensus 198 p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g------~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~ 271 (425)
T COG0823 198 PAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNG------NNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDG 271 (425)
T ss_pred cccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCC------ccCCccCCCCCCEEEEEECCCCCccEEEEcCCC
Confidence 34577777655542 22 358999999887666555333 233678999999999 54 6665 56666665
Q ss_pred CCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCe--EEEEecCCceEeEEeccccCCeEEEEECCCCcEEE
Q 022019 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQT--SAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 281 (304)
.. . ..+ ....+.-+.-.|+|++..++++.+..|. |.++|.+.... ..+......-....|+|||++|+
T Consensus 272 ~~--~---~~L----t~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~~~~~~p~~SpdG~~i~ 341 (425)
T COG0823 272 KN--L---PRL----TNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSGGGNSNPVWSPDGDKIV 341 (425)
T ss_pred Cc--c---eec----ccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeeccCCCCcCccCCCCCCEEE
Confidence 32 1 111 1122223366899966666666666665 66667765554 33332233223788999999998
Q ss_pred EeeccCCe--EEEEecccce
Q 022019 282 TGGRKDPY--ILCWDLRKAV 299 (304)
Q Consensus 282 ~~~~~d~~--i~vwd~~~~~ 299 (304)
..+..+|. |.+.|+.++.
T Consensus 342 ~~~~~~g~~~i~~~~~~~~~ 361 (425)
T COG0823 342 FESSSGGQWDIDKNDLASGG 361 (425)
T ss_pred EEeccCCceeeEEeccCCCC
Confidence 88733455 6666665543
No 332
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=98.37 E-value=4.5e-06 Score=70.79 Aligned_cols=158 Identities=14% Similarity=0.211 Sum_probs=111.7
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCC-eeeEEeecccccccccceEEEEECCCC--cEEEEE-cCCeEEEEEcCCCCccce
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTG-LLRCTYRAYDAVDEITAAFSVAFNPTG--TKIFAG-YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~~~v~~i~~~~~~--~~l~~~-~d~~i~v~d~~~~~~~~~ 209 (304)
++|.|+-++.++.-| +.+-|+... .+..-+. |.. .-.|-.+.|+|.. .+-+++ ....-.+|++.......
T Consensus 32 i~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~-h~t---pw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss~~a- 105 (1081)
T KOG0309|consen 32 INPSGRDIVLASRQG-LYIIDLDDPFTPPRWLH-HIT---PWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSSSNA- 105 (1081)
T ss_pred eccccchhhhhhhcC-eEEEeccCCCCCceeee-ccC---cchhcceecccCCCCceeEEecCcchhhhhhhhcCCccc-
Confidence 477888899888877 677777643 2222221 111 1145677888753 344444 66677789887643322
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce-EeEEeccccCCeEEEEECCCCcEEEEeeccCC
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME-LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDP 288 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~ 288 (304)
+.....+|...++.+.|+|+...++++++.|-.+..||+++.. ++..+..-......+.|+-....+.+.+ ..+
T Consensus 106 ----Ief~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlass-hg~ 180 (1081)
T KOG0309|consen 106 ----IEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASS-HGN 180 (1081)
T ss_pred ----eEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhc-cCC
Confidence 2222367889999999999999999999999999999999854 6766665566678899987666666666 678
Q ss_pred eEEEEecccceeee
Q 022019 289 YILCWDLRKAVQVV 302 (304)
Q Consensus 289 ~i~vwd~~~~~~~~ 302 (304)
.|++||++.|...+
T Consensus 181 ~i~vwd~r~gs~pl 194 (1081)
T KOG0309|consen 181 DIFVWDLRKGSTPL 194 (1081)
T ss_pred ceEEEeccCCCcce
Confidence 89999999876543
No 333
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=98.36 E-value=0.0001 Score=47.97 Aligned_cols=92 Identities=16% Similarity=0.177 Sum_probs=61.0
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeeccc
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNK 218 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 218 (304)
+.|++|+.|..|++|+- .+.+..+.... .|.++.-...+++.++-.+|+|-+|+-.. .+...+
T Consensus 16 ~eLlvGs~D~~IRvf~~--~e~~~Ei~e~~------~v~~L~~~~~~~F~Y~l~NGTVGvY~~~~------RlWRiK--- 78 (111)
T PF14783_consen 16 NELLVGSDDFEIRVFKG--DEIVAEITETD------KVTSLCSLGGGRFAYALANGTVGVYDRSQ------RLWRIK--- 78 (111)
T ss_pred ceEEEecCCcEEEEEeC--CcEEEEEeccc------ceEEEEEcCCCEEEEEecCCEEEEEeCcc------eeeeec---
Confidence 57999999999999974 45666666554 77888877776655566999999998643 112221
Q ss_pred cccccceeEEEee---cCCCcEEEEEecCCeEEE
Q 022019 219 EGQAGIMSAIAFS---PTHTGMLAIGSYSQTSAI 249 (304)
Q Consensus 219 ~~~~~~v~~~~~~---p~~~~~l~~~~~dg~i~i 249 (304)
. ...+.++.+. .++-.-|++|-.+|.|-+
T Consensus 79 S--K~~~~~~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 79 S--KNQVTSMAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred c--CCCeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence 1 1124455443 334457889999998743
No 334
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=98.24 E-value=6.1e-06 Score=68.71 Aligned_cols=76 Identities=24% Similarity=0.288 Sum_probs=68.2
Q ss_pred ceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeE-EEEECCCCcEEEEeeccCCeEEEEecccceeee
Q 022019 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVT-HVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 224 ~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
.+.-+.|+| ...++|.+..+|.|.+..+. .+.+.++..|...++ +++|.|||+.|+.|- .||+|++-|+.++..+.
T Consensus 22 ~i~~~ewnP-~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~-kdG~I~L~Dve~~~~l~ 98 (665)
T KOG4640|consen 22 NIKRIEWNP-KMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGF-KDGTIRLHDVEKGGRLV 98 (665)
T ss_pred ceEEEEEcC-ccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEe-cCCeEEEEEccCCCcee
Confidence 377899999 88899999999999999987 888888987777777 999999999999999 99999999999987664
No 335
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.24 E-value=0.00016 Score=60.38 Aligned_cols=146 Identities=13% Similarity=0.150 Sum_probs=80.4
Q ss_pred EEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEc
Q 022019 122 VYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDV 201 (304)
Q Consensus 122 v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~ 201 (304)
.......|..+.++|+|+.++++ .||.-.++.....+... .+ ....+.|.+.+++.+....+.|.++.-
T Consensus 28 lg~~~~~p~~ls~npngr~v~V~-g~geY~iyt~~~~r~k~--~G--------~g~~~vw~~~n~yAv~~~~~~I~I~kn 96 (443)
T PF04053_consen 28 LGSCEIYPQSLSHNPNGRFVLVC-GDGEYEIYTALAWRNKA--FG--------SGLSFVWSSRNRYAVLESSSTIKIYKN 96 (443)
T ss_dssp EEE-SS--SEEEE-TTSSEEEEE-ETTEEEEEETTTTEEEE--EE--------E-SEEEE-TSSEEEEE-TTS-EEEEET
T ss_pred CCCCCcCCeeEEECCCCCEEEEE-cCCEEEEEEccCCcccc--cC--------ceeEEEEecCccEEEEECCCeEEEEEc
Confidence 33445557777789999998884 57778888743333222 11 345789999776555557888999732
Q ss_pred CCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEE
Q 022019 202 HRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 281 (304)
-.. ...+.+. . ...+..+- + |.+|+..+ ++.|.+||..+++.+..+... +|..+.|+++|.+++
T Consensus 97 ~~~-~~~k~i~------~--~~~~~~If--~--G~LL~~~~-~~~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~va 160 (443)
T PF04053_consen 97 FKN-EVVKSIK------L--PFSVEKIF--G--GNLLGVKS-SDFICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVA 160 (443)
T ss_dssp TEE--TT-------------SS-EEEEE-----SSSEEEEE-TTEEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEE
T ss_pred Ccc-ccceEEc------C--CcccceEE--c--CcEEEEEC-CCCEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEE
Confidence 211 1101110 0 01122222 2 44555554 458999999999999999843 389999999999999
Q ss_pred EeeccCCeEEEEecc
Q 022019 282 TGGRKDPYILCWDLR 296 (304)
Q Consensus 282 ~~~~~d~~i~vwd~~ 296 (304)
..+ .+ .+.+++..
T Consensus 161 l~t-~~-~i~il~~~ 173 (443)
T PF04053_consen 161 LVT-KD-SIYILKYN 173 (443)
T ss_dssp EE--S--SEEEEEE-
T ss_pred EEe-CC-eEEEEEec
Confidence 998 44 57776653
No 336
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=98.22 E-value=2e-05 Score=68.22 Aligned_cols=103 Identities=16% Similarity=0.187 Sum_probs=76.6
Q ss_pred CCCccEEEEEe----CCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccce
Q 022019 135 DPTSCVFASTT----RDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 135 ~~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~ 209 (304)
+|...+|++++ ..|+|.||- ++|++......+ ..+++++|+|..-.|+.| .-|.+.+|.....
T Consensus 24 HPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~P------~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~----- 91 (1416)
T KOG3617|consen 24 HPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTYP------VHATSLCWHPEEFVLAQGWEMGVSDVQKTNTT----- 91 (1416)
T ss_pred CCCCceeEEEEecCCCCceEEEEe-cCCCCCcccccc------eehhhhccChHHHHHhhccccceeEEEecCCc-----
Confidence 45555676664 368888885 567654333222 256789999998888888 8899999998762
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~ 253 (304)
........|..+|..+.||| +|..++++..-|.+.+|...
T Consensus 92 ---e~htv~~th~a~i~~l~wS~-~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 92 ---ETHTVVETHPAPIQGLDWSH-DGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred ---eeeeeccCCCCCceeEEecC-CCCeEEEcCCCceeEEEEee
Confidence 22222367888999999999 77799999999999999765
No 337
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.20 E-value=0.00015 Score=62.93 Aligned_cols=155 Identities=12% Similarity=0.163 Sum_probs=98.4
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccc-eEEEEECCCCcEEE-EEcC-C----eEEEEEcCCCCcc
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITA-AFSVAFNPTGTKIF-AGYN-K----SVRVFDVHRPGRD 207 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~l~-~~~d-~----~i~v~d~~~~~~~ 207 (304)
++.+..++.|+.+|.|.+.+- +-+....+..... . |..+....+..+|+ .|.| + .++|||++.....
T Consensus 32 ~s~~~~vvigt~~G~V~~Ln~-s~~~~~~fqa~~~-----siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n 105 (933)
T KOG2114|consen 32 SSSTGSVVIGTADGRVVILNS-SFQLIRGFQAYEQ-----SIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKN 105 (933)
T ss_pred cCCCceEEEeeccccEEEecc-cceeeehheecch-----hhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCC
Confidence 778889999999998888873 2333344544433 3 44444444445666 5633 3 6999999864211
Q ss_pred --ceee---eeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC----CceEeEEeccccCCeEEEEECCCCc
Q 022019 208 --FEKY---STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED----NMELLYVLHGQEGGVTHVQFSRDGN 278 (304)
Q Consensus 208 --~~~~---~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~----~~~~~~~~~~~~~~v~~~~~~~~~~ 278 (304)
...+ ............++.+++.+. +-..+++|-.||.|..+.-+ .+....-......+|+.+.+..++.
T Consensus 106 ~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~-~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~ 184 (933)
T KOG2114|consen 106 NSPQCLYEHRIFTIKNPTNPSPASSLAVSE-DLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGK 184 (933)
T ss_pred CCcceeeeeeeeccCCCCCCCcceEEEEEc-cccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCc
Confidence 2222 122212233467788999998 57789999999999998532 1222222223467899999999988
Q ss_pred EEEEeeccCCeEEEEeccc
Q 022019 279 YLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 279 ~l~~~~~~d~~i~vwd~~~ 297 (304)
.++.+. .-..|.+|.+..
T Consensus 185 s~lFv~-Tt~~V~~y~l~g 202 (933)
T KOG2114|consen 185 SVLFVA-TTEQVMLYSLSG 202 (933)
T ss_pred eeEEEE-ecceeEEEEecC
Confidence 744344 466789998874
No 338
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.18 E-value=0.00085 Score=57.47 Aligned_cols=151 Identities=16% Similarity=0.078 Sum_probs=92.7
Q ss_pred eCCCccEEEEE-eCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEc--------------------
Q 022019 134 SDPTSCVFAST-TRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGY-------------------- 192 (304)
Q Consensus 134 ~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-------------------- 192 (304)
++|+|+.+... -..+.+.+.|..+.+...++.... ....++++|+|++++++.
T Consensus 200 lpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdg------npd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~ 273 (635)
T PRK02888 200 LPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDG------NLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWV 273 (635)
T ss_pred cCCCCCEeecccceeEEEEEEECccceEEEEEEeCC------CcccceECCCCCEEEEeccCcccCcceeeeccccCceE
Confidence 36677665433 335677888888777666665543 334567777777776331
Q ss_pred ---------------------CCeEEEEEcCCCCc-cceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEE
Q 022019 193 ---------------------NKSVRVFDVHRPGR-DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY 250 (304)
Q Consensus 193 ---------------------d~~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~ 250 (304)
++.|.+.|.++... .......+. -......+.++||+..+++++..+.+|.|+
T Consensus 274 vvfni~~iea~vkdGK~~~V~gn~V~VID~~t~~~~~~~v~~yIP-----VGKsPHGV~vSPDGkylyVanklS~tVSVI 348 (635)
T PRK02888 274 VVFNIARIEEAVKAGKFKTIGGSKVPVVDGRKAANAGSALTRYVP-----VPKNPHGVNTSPDGKYFIANGKLSPTVTVI 348 (635)
T ss_pred EEEchHHHHHhhhCCCEEEECCCEEEEEECCccccCCcceEEEEE-----CCCCccceEECCCCCEEEEeCCCCCcEEEE
Confidence 23455555544100 001111111 112256799999666666666779999999
Q ss_pred ecCCceE------------eEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 251 REDNMEL------------LYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 251 d~~~~~~------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
|+.+.+. +.+..... .-...+|.++|....|-- -|..|..||+.+
T Consensus 349 Dv~k~k~~~~~~~~~~~~vvaevevGl-GPLHTaFDg~G~aytslf-~dsqv~kwn~~~ 405 (635)
T PRK02888 349 DVRKLDDLFDGKIKPRDAVVAEPELGL-GPLHTAFDGRGNAYTTLF-LDSQIVKWNIEA 405 (635)
T ss_pred EChhhhhhhhccCCccceEEEeeccCC-CcceEEECCCCCEEEeEe-ecceeEEEehHH
Confidence 9987542 33444322 345688999998666666 899999999986
No 339
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.16 E-value=7.7e-06 Score=42.54 Aligned_cols=36 Identities=22% Similarity=0.477 Sum_probs=32.1
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEee
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFS 88 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd 88 (304)
...+..|...|.++.|.+++..+++++.|+.+++|+
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 5 LKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 345668899999999999999999999999999996
No 340
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.16 E-value=1.1e-05 Score=41.98 Aligned_cols=39 Identities=49% Similarity=0.732 Sum_probs=34.4
Q ss_pred ceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 255 MELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 255 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
++++..+..|...|.++.|++++.++++++ .|+.+++|+
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGKYLASAS-DDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCCEEEEec-CCCeEEEcC
Confidence 356667778889999999999999999999 999999996
No 341
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.15 E-value=0.00063 Score=56.75 Aligned_cols=201 Identities=9% Similarity=0.084 Sum_probs=103.2
Q ss_pred CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCE
Q 022019 71 DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPI 150 (304)
Q Consensus 71 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i 150 (304)
.+..+++++.+|.+.-+|..+++.......... ... ........+ .-.| . -.+..++.++.+|.+
T Consensus 68 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~----~~~---~~~~~~~~~---~~~~---~--v~~~~v~v~~~~g~l 132 (394)
T PRK11138 68 AYNKVYAADRAGLVKALDADTGKEIWSVDLSEK----DGW---FSKNKSALL---SGGV---T--VAGGKVYIGSEKGQV 132 (394)
T ss_pred ECCEEEEECCCCeEEEEECCCCcEeeEEcCCCc----ccc---ccccccccc---cccc---E--EECCEEEEEcCCCEE
Confidence 455777788889999999988876544322110 000 000000000 0000 0 134467778889999
Q ss_pred EEEEcCCCeeeEEeecccccccccceEE-EEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeec-cccccccceeEE
Q 022019 151 HLWDATTGLLRCTYRAYDAVDEITAAFS-VAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKG-NKEGQAGIMSAI 228 (304)
Q Consensus 151 ~i~d~~~~~~~~~~~~~~~~~~~~~v~~-i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~-~~~~~~~~v~~~ 228 (304)
+.+|.++|+.......... +.+ .... ++..++...++.+.-+|..++............ ...+...+
T Consensus 133 ~ald~~tG~~~W~~~~~~~------~~ssP~v~-~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP---- 201 (394)
T PRK11138 133 YALNAEDGEVAWQTKVAGE------ALSRPVVS-DGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAP---- 201 (394)
T ss_pred EEEECCCCCCcccccCCCc------eecCCEEE-CCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCC----
Confidence 9999999998776655431 111 1111 344444458899999999876432221100000 00001111
Q ss_pred EeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccC-------CeEEEEECC--CCcEEEEeeccCCeEEEEecccce
Q 022019 229 AFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEG-------GVTHVQFSR--DGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 229 ~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-------~v~~~~~~~--~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
... ++ .++.++.+|.+..+|..+++.+........ ....+.-+| .+..++.++ .+|.+..+|..+|+
T Consensus 202 ~v~--~~-~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~-~~g~l~ald~~tG~ 277 (394)
T PRK11138 202 ATA--FG-GAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALA-YNGNLVALDLRSGQ 277 (394)
T ss_pred EEE--CC-EEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEE-cCCeEEEEECCCCC
Confidence 111 22 466677889999899888876544321100 000111112 234555555 67777777777765
Q ss_pred ee
Q 022019 300 QV 301 (304)
Q Consensus 300 ~~ 301 (304)
.+
T Consensus 278 ~~ 279 (394)
T PRK11138 278 IV 279 (394)
T ss_pred EE
Confidence 43
No 342
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=98.15 E-value=0.0018 Score=51.49 Aligned_cols=106 Identities=16% Similarity=0.245 Sum_probs=68.5
Q ss_pred ceEEEEECCCCcEEEEE--cCCeEEEEEcCC-CCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCC-eEEEE
Q 022019 175 AAFSVAFNPTGTKIFAG--YNKSVRVFDVHR-PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ-TSAIY 250 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~--~d~~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg-~i~i~ 250 (304)
.-++|+||||++.++.. ..+.|.-|++.. ............ .....+..-.++... ++.+.+++..+| .|..|
T Consensus 164 ~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~--~~~~~G~PDG~~vDa-dG~lw~~a~~~g~~v~~~ 240 (307)
T COG3386 164 IPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVD--FDEEPGLPDGMAVDA-DGNLWVAAVWGGGRVVRF 240 (307)
T ss_pred ecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEE--ccCCCCCCCceEEeC-CCCEEEecccCCceEEEE
Confidence 45689999999988855 558888888762 111111100111 111234455677777 565554444444 89999
Q ss_pred ecCCceEeEEeccccCCeEEEEE-CCCCcEEEEee
Q 022019 251 REDNMELLYVLHGQEGGVTHVQF-SRDGNYLYTGG 284 (304)
Q Consensus 251 d~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~ 284 (304)
+.. ++++..+......+++++| .|+.+.|+..+
T Consensus 241 ~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs 274 (307)
T COG3386 241 NPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYITS 274 (307)
T ss_pred CCC-CcEEEEEECCCCCCccceEeCCCcCEEEEEe
Confidence 987 9999888877678899998 45566666655
No 343
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.15 E-value=0.0021 Score=53.70 Aligned_cols=135 Identities=12% Similarity=0.106 Sum_probs=76.6
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCCccceeeeeeecc
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGN 217 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 217 (304)
..++.++.+|.+..+|+.+|+......... ...+.. .+..++ ++.++.+..+|..++..... ...
T Consensus 257 ~~vy~~~~~g~l~ald~~tG~~~W~~~~~~-------~~~~~~--~~~~vy~~~~~g~l~ald~~tG~~~W~----~~~- 322 (394)
T PRK11138 257 GVVYALAYNGNLVALDLRSGQIVWKREYGS-------VNDFAV--DGGRIYLVDQNDRVYALDTRGGVELWS----QSD- 322 (394)
T ss_pred CEEEEEEcCCeEEEEECCCCCEEEeecCCC-------ccCcEE--ECCEEEEEcCCCeEEEEECCCCcEEEc----ccc-
Confidence 345556667777777777776554433211 111111 233444 45788888888866422111 000
Q ss_pred ccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeE-EEEECCCCcEEEEeeccCCeEEEEec
Q 022019 218 KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVT-HVQFSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 218 ~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
... ....+.... + ..+++++.+|.++..|..+++.+...+.....+. +..+ .+..|+.++ .||.|+.+++
T Consensus 323 -~~~-~~~~sp~v~--~-g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~--~~~~l~v~t-~~G~l~~~~~ 393 (394)
T PRK11138 323 -LLH-RLLTAPVLY--N-GYLVVGDSEGYLHWINREDGRFVAQQKVDSSGFLSEPVV--ADDKLLIQA-RDGTVYAITR 393 (394)
T ss_pred -cCC-CcccCCEEE--C-CEEEEEeCCCEEEEEECCCCCEEEEEEcCCCcceeCCEE--ECCEEEEEe-CCceEEEEeC
Confidence 000 011122222 2 3677889999999999999998877764333332 2223 244688888 8999988764
No 344
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.13 E-value=0.002 Score=49.46 Aligned_cols=202 Identities=12% Similarity=0.178 Sum_probs=116.4
Q ss_pred CCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (304)
|-...|.++.|+|+.+.|++......-.|+=..++.....+....+ .....+.| -.+
T Consensus 83 g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~----------------~DpE~Iey-------ig~ 139 (316)
T COG3204 83 GETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGF----------------SDPETIEY-------IGG 139 (316)
T ss_pred cccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEeccccc----------------CChhHeEE-------ecC
Confidence 4455599999999999888888777777775555544332221110 11111222 345
Q ss_pred ccEEEEEeCCCCEEEEEcCCCeeeE-----EeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceee
Q 022019 138 SCVFASTTRDHPIHLWDATTGLLRC-----TYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~~~~-----~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
|++.++--.++.+.++.+..+.... .++.............++|+|.+..+... .-.-+.||.+..........
T Consensus 140 n~fvi~dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~ 219 (316)
T COG3204 140 NQFVIVDERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVH 219 (316)
T ss_pred CEEEEEehhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccc
Confidence 6666666678888888876553221 22222211113367899999998888876 55667777665432221111
Q ss_pred eeee--ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccC---------CeEEEEECCCCcEE
Q 022019 212 STLK--GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEG---------GVTHVQFSRDGNYL 280 (304)
Q Consensus 212 ~~~~--~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l 280 (304)
.... ....-.-..+.++.|++..+.+|+-+.+++.+.-.|.. +.++..+.-+.+ ..-.++..++|. |
T Consensus 220 ~~~~~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~-G~~~~~lsL~~g~~gL~~dipqaEGiamDd~g~-l 297 (316)
T COG3204 220 ASLDPTADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDLS-GEVIELLSLTKGNHGLSSDIPQAEGIAMDDDGN-L 297 (316)
T ss_pred cccCcccccceEeeccccceecCCCCcEEEEecCCceEEEEecC-CCeeeeEEeccCCCCCcccCCCcceeEECCCCC-E
Confidence 1100 00011123478899998778888888888988888874 444444432211 234567776665 4
Q ss_pred EEee
Q 022019 281 YTGG 284 (304)
Q Consensus 281 ~~~~ 284 (304)
+..|
T Consensus 298 YIvS 301 (316)
T COG3204 298 YIVS 301 (316)
T ss_pred EEEe
Confidence 4455
No 345
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=98.12 E-value=2.5e-06 Score=73.88 Aligned_cols=147 Identities=15% Similarity=0.202 Sum_probs=107.3
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE--c-CCeEEEEEcCCCCccc
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG--Y-NKSVRVFDVHRPGRDF 208 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~-d~~i~v~d~~~~~~~~ 208 (304)
.+|+.+.++|++|+-.|.|++|++.+|........|.. .|+-+.-+.+|..++++ . .--..+|++.....
T Consensus 1107 ~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~S-----avT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~-- 1179 (1516)
T KOG1832|consen 1107 IAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQS-----AVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGG-- 1179 (1516)
T ss_pred EEeecCCceEEeeeccceEEEEEccCcccccccccccc-----ccccccccCCcceeeeeccccCchHHHhccccccC--
Confidence 45588889999999999999999999998888877765 88999988899888843 2 33578999865221
Q ss_pred eeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEe-cc---ccCCeEEEEECCCCcEEEEee
Q 022019 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVL-HG---QEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~---~~~~v~~~~~~~~~~~l~~~~ 284 (304)
....+ ..-.++.|+. ....-+.|+.-....+||+.++.++.++ .+ ..-.-+.+.|+|+...++
T Consensus 1180 -----~~Hsf----~ed~~vkFsn-~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl--- 1246 (1516)
T KOG1832|consen 1180 -----PRHSF----DEDKAVKFSN-SLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL--- 1246 (1516)
T ss_pred -----ccccc----cccceeehhh-hHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEe---
Confidence 11111 1245788988 4555566777778999999999877663 32 122336788999999887
Q ss_pred ccCCeEEEEecccceee
Q 022019 285 RKDPYILCWDLRKAVQV 301 (304)
Q Consensus 285 ~~d~~i~vwd~~~~~~~ 301 (304)
.|| .+||++..+.|
T Consensus 1247 -ndG--vLWDvR~~~aI 1260 (1516)
T KOG1832|consen 1247 -NDG--VLWDVRIPEAI 1260 (1516)
T ss_pred -eCc--eeeeeccHHHH
Confidence 455 58999877543
No 346
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=98.06 E-value=0.004 Score=51.99 Aligned_cols=57 Identities=11% Similarity=0.161 Sum_probs=37.4
Q ss_pred EEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 237 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
..+....++.+.+.+....+. +. ..+++..++.||+|++||.-. .+|.+.+....-.
T Consensus 192 ~~i~~~~g~~i~~i~~~~~~~---i~-~~~~i~~iavSpng~~iAl~t-~~g~l~v~ssDf~ 248 (410)
T PF04841_consen 192 VEILLANGETIYIIDENSFKQ---ID-SDGPIIKIAVSPNGKFIALFT-DSGNLWVVSSDFS 248 (410)
T ss_pred eEEEEecCCEEEEEEcccccc---cc-CCCCeEEEEECCCCCEEEEEE-CCCCEEEEECccc
Confidence 344444455566444332211 22 246899999999999999998 8899888865443
No 347
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.04 E-value=0.00026 Score=53.83 Aligned_cols=200 Identities=14% Similarity=0.113 Sum_probs=105.6
Q ss_pred EEEcCCCCeEEEecC-----CCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccE
Q 022019 66 IKWSPDGSSFLTSSE-----DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCV 140 (304)
Q Consensus 66 i~~s~~~~~l~s~~~-----dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 140 (304)
=.|||||.+|...-. -|.|-|||...+-. +-......-.-|+.+.+.+||+.
T Consensus 119 Gvfs~dG~~LYATEndfd~~rGViGvYd~r~~fq-----------------------rvgE~~t~GiGpHev~lm~DGrt 175 (366)
T COG3490 119 GVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQ-----------------------RVGEFSTHGIGPHEVTLMADGRT 175 (366)
T ss_pred cccCCCCcEEEeecCCCCCCCceEEEEecccccc-----------------------eecccccCCcCcceeEEecCCcE
Confidence 468999998886533 37889999873211 00111112223344445778888
Q ss_pred EEEEeC------------------CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCC----eEE
Q 022019 141 FASTTR------------------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNK----SVR 197 (304)
Q Consensus 141 l~~~~~------------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~----~i~ 197 (304)
++.+.. .-++.+.|..+|+.+........ .+.-.+..++..+||+.++.+ ..| .--
T Consensus 176 lvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~-l~~lSiRHld~g~dgtvwfgcQy~G~~~d~pp 254 (366)
T COG3490 176 LVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPAS-LRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPP 254 (366)
T ss_pred EEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchh-hhhcceeeeeeCCCCcEEEEEEeeCCCccCCc
Confidence 887643 11233444445554443333211 122267788888888887743 222 111
Q ss_pred EEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCC
Q 022019 198 VFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDG 277 (304)
Q Consensus 198 v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 277 (304)
+--...+++.++.+.............|-+++.+.+.+...+++=..+..-+||..++..+..-.-. .+..++-. .+
T Consensus 255 Lvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a~l~--daaGva~~-~~ 331 (366)
T COG3490 255 LVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEAALP--DAAGVAAA-KG 331 (366)
T ss_pred ceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEeccccc--ccccceec-cC
Confidence 1112222333333333322223344567889988856655555555667889999999876544311 12222222 23
Q ss_pred cEEEEeeccCCeEEEEe
Q 022019 278 NYLYTGGRKDPYILCWD 294 (304)
Q Consensus 278 ~~l~~~~~~d~~i~vwd 294 (304)
.+.++. .+|.+.++.
T Consensus 332 gf~vss--g~G~~~~~s 346 (366)
T COG3490 332 GFAVSS--GQGRIIFYS 346 (366)
T ss_pred ceEEec--CCceEEecc
Confidence 344444 477777664
No 348
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.04 E-value=0.0011 Score=55.58 Aligned_cols=176 Identities=11% Similarity=0.150 Sum_probs=83.6
Q ss_pred ecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeC
Q 022019 56 SSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135 (304)
Q Consensus 56 ~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 135 (304)
+....-....+.++|+|++++.+ .||.-.|+...... ......-....| .
T Consensus 28 lg~~~~~p~~ls~npngr~v~V~-g~geY~iyt~~~~r----------------------~k~~G~g~~~vw-------~ 77 (443)
T PF04053_consen 28 LGSCEIYPQSLSHNPNGRFVLVC-GDGEYEIYTALAWR----------------------NKAFGSGLSFVW-------S 77 (443)
T ss_dssp EEE-SS--SEEEE-TTSSEEEEE-ETTEEEEEETTTTE----------------------EEEEEE-SEEEE--------
T ss_pred CCCCCcCCeeEEECCCCCEEEEE-cCCEEEEEEccCCc----------------------ccccCceeEEEE-------e
Confidence 33445557899999999998885 47788888732110 000123334455 4
Q ss_pred CCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeee
Q 022019 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLK 215 (304)
Q Consensus 136 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~ 215 (304)
+.+ .+|+-...++|.++.--+.+....+.... .+..|-. |..|....++.|.+||+.+. +.+..+
T Consensus 78 ~~n-~yAv~~~~~~I~I~kn~~~~~~k~i~~~~------~~~~If~---G~LL~~~~~~~i~~yDw~~~----~~i~~i- 142 (443)
T PF04053_consen 78 SRN-RYAVLESSSTIKIYKNFKNEVVKSIKLPF------SVEKIFG---GNLLGVKSSDFICFYDWETG----KLIRRI- 142 (443)
T ss_dssp TSS-EEEEE-TTS-EEEEETTEE-TT-----SS-------EEEEE----SSSEEEEETTEEEEE-TTT------EEEEE-
T ss_pred cCc-cEEEEECCCeEEEEEcCccccceEEcCCc------ccceEEc---CcEEEEECCCCEEEEEhhHc----ceeeEE-
Confidence 433 46666668889886322222222333221 2233332 88888776778999999863 112221
Q ss_pred ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc-----------eEeEEeccccCCeEEEEECCCCcEEEEee
Q 022019 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM-----------ELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 216 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
. -.+|..+.|++ ++.+++..+.+ .+.|++.... .....+..-...|.+..|..+ -+++|..
T Consensus 143 ---~--v~~vk~V~Ws~-~g~~val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d-~fiYtT~ 214 (443)
T PF04053_consen 143 ---D--VSAVKYVIWSD-DGELVALVTKD-SIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED-CFIYTTS 214 (443)
T ss_dssp ---S--S-E-EEEEE-T-TSSEEEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT-EEEEE-T
T ss_pred ---e--cCCCcEEEEEC-CCCEEEEEeCC-eEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC-EEEEEcC
Confidence 1 12378899999 66677777654 5666654322 022222222446777777655 4455443
No 349
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.04 E-value=4.9e-05 Score=64.37 Aligned_cols=114 Identities=19% Similarity=0.239 Sum_probs=83.1
Q ss_pred ceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC
Q 022019 175 AAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~ 253 (304)
.|.--+++..+++++.| .-|.+++|+-..+.. ......+..+.+..+..++ ...++|+|+..|.|.++-+.
T Consensus 35 ~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~-------~~~~~~~~~~~~~~~~vs~-~e~lvAagt~~g~V~v~ql~ 106 (726)
T KOG3621|consen 35 RVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEM-------RKLKNEGATGITCVRSVSS-VEYLVAAGTASGRVSVFQLN 106 (726)
T ss_pred eEEEEEeecCCceEEEecccceEEEEecCchhh-------hcccccCccceEEEEEecc-hhHhhhhhcCCceEEeehhh
Confidence 44445566778999966 889999998655311 1111123445566777888 78899999999999999886
Q ss_pred CceEe-----EEe-ccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 254 NMELL-----YVL-HGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 254 ~~~~~-----~~~-~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
...+. ..+ ..|+..|++++|++++..+++|. ..|+|.+-.+..
T Consensus 107 ~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD-~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 107 KELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGD-SQGKVVLTELDS 155 (726)
T ss_pred ccCCCcceeeccccccCCceEEEEEecccccEEeecC-CCceEEEEEech
Confidence 64321 111 13677899999999999999999 999999888776
No 350
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=98.03 E-value=0.0032 Score=48.35 Aligned_cols=166 Identities=10% Similarity=0.137 Sum_probs=91.4
Q ss_pred CeEEEEeecCccceeCCC-ccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEE
Q 022019 120 ESVYDFCWFPHMSASDPT-SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVR 197 (304)
Q Consensus 120 ~~v~~~~~~~~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~ 197 (304)
..+..++| +|+ +.++++....+.|..++. +|+.+..+..... .....|++..++.++++. .++.+.
T Consensus 22 ~e~SGLTy-------~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~----~D~EgI~y~g~~~~vl~~Er~~~L~ 89 (248)
T PF06977_consen 22 DELSGLTY-------NPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGF----GDYEGITYLGNGRYVLSEERDQRLY 89 (248)
T ss_dssp S-EEEEEE-------ETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-----SSEEEEEE-STTEEEEEETTTTEEE
T ss_pred CCccccEE-------cCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCC----CCceeEEEECCCEEEEEEcCCCcEE
Confidence 45788888 445 456777777888888886 4788777776542 256789998888888877 799999
Q ss_pred EEEcCCCCcccee--eeeeecc-ccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC---ceEe--EEec------c
Q 022019 198 VFDVHRPGRDFEK--YSTLKGN-KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN---MELL--YVLH------G 263 (304)
Q Consensus 198 v~d~~~~~~~~~~--~~~~~~~-~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~---~~~~--~~~~------~ 263 (304)
++++......... ...+... ...+...+..++|+| .+..|+++-+..-..||.+.. ...+ .... .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~-~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (248)
T PF06977_consen 90 IFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDP-KTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKL 168 (248)
T ss_dssp EEEE----TT--EEEEEEEE---S---SS--EEEEEET-TTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT-
T ss_pred EEEEeccccccchhhceEEecccccCCCcceEEEEEcC-CCCEEEEEeCCCChhhEEEccccCccceeeccccccccccc
Confidence 9999543322211 1222211 123445589999999 444555666766677776653 1111 1111 1
Q ss_pred ccCCeEEEEECCCCcEEEEeeccCCeEEEEecccce
Q 022019 264 QEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 264 ~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
....+.+++++|....|+.-+..+..|..+| .+|+
T Consensus 169 ~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~ 203 (248)
T PF06977_consen 169 FVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGR 203 (248)
T ss_dssp -SS---EEEEETTTTEEEEEETTTTEEEEE--TT--
T ss_pred eeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCC
Confidence 2335788999997655444443777888888 4444
No 351
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=98.02 E-value=2.3e-05 Score=67.83 Aligned_cols=108 Identities=16% Similarity=0.190 Sum_probs=83.3
Q ss_pred EEEEECCCCcEEEE-E----cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEe
Q 022019 177 FSVAFNPTGTKIFA-G----YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYR 251 (304)
Q Consensus 177 ~~i~~~~~~~~l~~-~----~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d 251 (304)
+-.+|+|...++++ + ..|.|.||-- +++ +... ....-.+++++|+| ...+|+.|-.-|.+.+|.
T Consensus 19 ti~SWHPsePlfAVA~fS~er~GSVtIfad-tGE-Pqr~--------Vt~P~hatSLCWHp-e~~vLa~gwe~g~~~v~~ 87 (1416)
T KOG3617|consen 19 TISSWHPSEPLFAVASFSPERGGSVTIFAD-TGE-PQRD--------VTYPVHATSLCWHP-EEFVLAQGWEMGVSDVQK 87 (1416)
T ss_pred cccccCCCCceeEEEEecCCCCceEEEEec-CCC-CCcc--------cccceehhhhccCh-HHHHHhhccccceeEEEe
Confidence 34689999988883 2 4688888853 221 1111 11122367899999 888999999999999999
Q ss_pred cCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 252 EDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 252 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
..+.+.-.....|..+|..+.|||+|..|+++. .-|.+.+|...
T Consensus 88 ~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d-~~g~v~lwr~d 131 (1416)
T KOG3617|consen 88 TNTTETHTVVETHPAPIQGLDWSHDGTVLMTLD-NPGSVHLWRYD 131 (1416)
T ss_pred cCCceeeeeccCCCCCceeEEecCCCCeEEEcC-CCceeEEEEee
Confidence 877766666668999999999999999999999 89999999876
No 352
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.99 E-value=0.0036 Score=50.66 Aligned_cols=168 Identities=12% Similarity=0.161 Sum_probs=95.8
Q ss_pred EEeecCCeEEEEeecCccceeCC----CccEEEEEeC---------C-CCEEEEEcCCC-eeeEEeecccccccccceEE
Q 022019 114 LVVTEGESVYDFCWFPHMSASDP----TSCVFASTTR---------D-HPIHLWDATTG-LLRCTYRAYDAVDEITAAFS 178 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~----~~~~l~~~~~---------d-g~i~i~d~~~~-~~~~~~~~~~~~~~~~~v~~ 178 (304)
..+.....+.+++... +.. ...++++|.. . |.|.++++... .....+..........+|++
T Consensus 18 ~~l~~~E~~~s~~~~~----l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~a 93 (321)
T PF03178_consen 18 FELEPNEHVTSLCSVK----LKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTA 93 (321)
T ss_dssp EEEETTEEEEEEEEEE----ETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEE
T ss_pred EECCCCceEEEEEEEE----EcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceE
Confidence 4445555666554421 122 2467777743 2 88999999884 11111111111122237888
Q ss_pred EEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC-ceE
Q 022019 179 VAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-MEL 257 (304)
Q Consensus 179 i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~-~~~ 257 (304)
+.-- +..++++.++.|.+|++.... .+...... .....+.++.... .++++|.....+.++..+. ...
T Consensus 94 i~~~--~~~lv~~~g~~l~v~~l~~~~-~l~~~~~~-----~~~~~i~sl~~~~---~~I~vgD~~~sv~~~~~~~~~~~ 162 (321)
T PF03178_consen 94 ICSF--NGRLVVAVGNKLYVYDLDNSK-TLLKKAFY-----DSPFYITSLSVFK---NYILVGDAMKSVSLLRYDEENNK 162 (321)
T ss_dssp EEEE--TTEEEEEETTEEEEEEEETTS-SEEEEEEE------BSSSEEEEEEET---TEEEEEESSSSEEEEEEETTTE-
T ss_pred hhhh--CCEEEEeecCEEEEEEccCcc-cchhhhee-----cceEEEEEEeccc---cEEEEEEcccCEEEEEEEccCCE
Confidence 7765 445778888999999998743 11111111 1122456665553 3888898888888775432 222
Q ss_pred eEEec--cccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 258 LYVLH--GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 258 ~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
+..+. .....++++.|-+++..++.+. .+|.+.++....
T Consensus 163 l~~va~d~~~~~v~~~~~l~d~~~~i~~D-~~gnl~~l~~~~ 203 (321)
T PF03178_consen 163 LILVARDYQPRWVTAAEFLVDEDTIIVGD-KDGNLFVLRYNP 203 (321)
T ss_dssp EEEEEEESS-BEEEEEEEE-SSSEEEEEE-TTSEEEEEEE-S
T ss_pred EEEEEecCCCccEEEEEEecCCcEEEEEc-CCCeEEEEEECC
Confidence 22222 2345689999987777888888 999999998863
No 353
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=97.97 E-value=7e-05 Score=63.46 Aligned_cols=133 Identities=14% Similarity=0.150 Sum_probs=90.6
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
+..+++++.|+.-|.+++|+-..++.... +... ....+.....+++..++|+| ..|.|.++-+.........+
T Consensus 42 dst~~~l~~GsS~G~lyl~~R~~~~~~~~-~~~~---~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~-- 115 (726)
T KOG3621|consen 42 DATEEYLAMGSSAGSVYLYNRHTGEMRKL-KNEG---ATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDY-- 115 (726)
T ss_pred ecCCceEEEecccceEEEEecCchhhhcc-cccC---ccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCccee--
Confidence 55788999999999999999766654332 2211 11256677888888888866 88999999887633222211
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc----eEeEEeccccCCeEEEEEC
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM----ELLYVLHGQEGGVTHVQFS 274 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~v~~~~~~ 274 (304)
+......|...|++++|++ ++..+++|...|.|..-.+... .....+-...+.|..+...
T Consensus 116 ~t~~d~~~~~rVTal~Ws~-~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~ 179 (726)
T KOG3621|consen 116 VTPCDKSHKCRVTALEWSK-NGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL 179 (726)
T ss_pred eccccccCCceEEEEEecc-cccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc
Confidence 1222234778899999999 8889999999999998887762 1222222334567777665
No 354
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.96 E-value=0.0024 Score=52.94 Aligned_cols=159 Identities=17% Similarity=0.250 Sum_probs=106.3
Q ss_pred ecCccceeCCCcc-EEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-c---CCeEEEEEc
Q 022019 127 WFPHMSASDPTSC-VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y---NKSVRVFDV 201 (304)
Q Consensus 127 ~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~---d~~i~v~d~ 201 (304)
+.|...++++.+. .++....+..|.+.|..+........... ....++++|+++.++++ . ++.+.+.|.
T Consensus 74 ~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~------~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~ 147 (381)
T COG3391 74 VYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL------GPVGLAVDPDGKYVYVANAGNGNNTVSVIDA 147 (381)
T ss_pred ccccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeecc------CCceEEECCCCCEEEEEecccCCceEEEEeC
Confidence 5566667788887 45555556889999987776665554433 45689999999888854 3 688888887
Q ss_pred CCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeE-E----eccccCCeEEEEECCC
Q 022019 202 HRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLY-V----LHGQEGGVTHVQFSRD 276 (304)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~-~----~~~~~~~v~~~~~~~~ 276 (304)
.+... .... ..+. .+ ..++++|++...+++-..++.|.++|........ . +.. ...-..+.++|+
T Consensus 148 ~t~~~----~~~~---~vG~-~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~-~~~P~~i~v~~~ 217 (381)
T COG3391 148 ATNKV----TATI---PVGN-TP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGV-GTGPAGIAVDPD 217 (381)
T ss_pred CCCeE----EEEE---ecCC-Cc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceecccccccccc-CCCCceEEECCC
Confidence 65311 1111 1111 22 7899999655566666688999999977665553 1 222 223467899999
Q ss_pred CcEEEEeeccC--CeEEEEecccceee
Q 022019 277 GNYLYTGGRKD--PYILCWDLRKAVQV 301 (304)
Q Consensus 277 ~~~l~~~~~~d--~~i~vwd~~~~~~~ 301 (304)
|.+++.....+ +.+...|..++...
T Consensus 218 g~~~yV~~~~~~~~~v~~id~~~~~v~ 244 (381)
T COG3391 218 GNRVYVANDGSGSNNVLKIDTATGNVT 244 (381)
T ss_pred CCEEEEEeccCCCceEEEEeCCCceEE
Confidence 99887776223 58888888876543
No 355
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.96 E-value=7.8e-05 Score=62.42 Aligned_cols=93 Identities=16% Similarity=0.189 Sum_probs=68.4
Q ss_pred CeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceE-EEEECCCCcEEEEE-cCCeEE
Q 022019 120 ESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAF-SVAFNPTGTKIFAG-YNKSVR 197 (304)
Q Consensus 120 ~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~-~i~~~~~~~~l~~~-~d~~i~ 197 (304)
..+.-+.| +|.-.++|.+..+|.|.++.+. -+.+.+++.++. .++ +++|.|||+.|++| .||+|+
T Consensus 21 ~~i~~~ew-------nP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~-----~v~~sL~W~~DGkllaVg~kdG~I~ 87 (665)
T KOG4640|consen 21 INIKRIEW-------NPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGE-----NVTASLCWRPDGKLLAVGFKDGTIR 87 (665)
T ss_pred cceEEEEE-------cCccchhheeccCCcEEEEEec-cceeEeccCCCC-----ccceeeeecCCCCEEEEEecCCeEE
Confidence 45666777 5667789999999999999987 555666665554 555 99999999999999 999999
Q ss_pred EEEcCCCCccceeeeeeeccccccccceeEEEeec
Q 022019 198 VFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSP 232 (304)
Q Consensus 198 v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 232 (304)
+-|+.++..... ........|.++-|+|
T Consensus 88 L~Dve~~~~l~~-------~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 88 LHDVEKGGRLVS-------FLFSVETDISKGIWDR 115 (665)
T ss_pred EEEccCCCceec-------cccccccchheeeccc
Confidence 999988632211 1122344577777765
No 356
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.95 E-value=0.0067 Score=49.13 Aligned_cols=187 Identities=13% Similarity=0.104 Sum_probs=101.6
Q ss_pred CCeEEEecC----------CCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEE
Q 022019 72 GSSFLTSSE----------DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF 141 (304)
Q Consensus 72 ~~~l~s~~~----------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 141 (304)
..+|+.|+. .|.|.++++.+... ...............+|++++-. ++. |
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~-----------~~~~l~~i~~~~~~g~V~ai~~~--------~~~-l 101 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPE-----------NNFKLKLIHSTEVKGPVTAICSF--------NGR-L 101 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS----------------EEEEEEEEEESS-EEEEEEE--------TTE-E
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccc-----------cceEEEEEEEEeecCcceEhhhh--------CCE-E
Confidence 457777642 28999999886400 00111112233445778887642 344 4
Q ss_pred EEEeCCCCEEEEEcCCCe-eeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeecccc
Q 022019 142 ASTTRDHPIHLWDATTGL-LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKE 219 (304)
Q Consensus 142 ~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 219 (304)
+++. .+.|++|++...+ ....-..... ..+.++... ++++++| ....+.++..+.....+..+.. .
T Consensus 102 v~~~-g~~l~v~~l~~~~~l~~~~~~~~~----~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~~~~~l~~va~-----d 169 (321)
T PF03178_consen 102 VVAV-GNKLYVYDLDNSKTLLKKAFYDSP----FYITSLSVF--KNYILVGDAMKSVSLLRYDEENNKLILVAR-----D 169 (321)
T ss_dssp EEEE-TTEEEEEEEETTSSEEEEEEE-BS----SSEEEEEEE--TTEEEEEESSSSEEEEEEETTTE-EEEEEE-----E
T ss_pred EEee-cCEEEEEEccCcccchhhheecce----EEEEEEecc--ccEEEEEEcccCEEEEEEEccCCEEEEEEe-----c
Confidence 4444 4789999998877 4333222221 145555554 5588877 7777888766543222222221 2
Q ss_pred ccccceeEEEeecCCCcEEEEEecCCeEEEEecCC-------c----eEeEEeccccCCeEEE---EECCC--Cc-----
Q 022019 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-------M----ELLYVLHGQEGGVTHV---QFSRD--GN----- 278 (304)
Q Consensus 220 ~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~-------~----~~~~~~~~~~~~v~~~---~~~~~--~~----- 278 (304)
.....++++.|-+++ ..++++..+|.+.++.... + .....+. ....|+++ .+.|. +.
T Consensus 170 ~~~~~v~~~~~l~d~-~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~-lg~~v~~~~~~~l~~~~~~~~~~~~ 247 (321)
T PF03178_consen 170 YQPRWVTAAEFLVDE-DTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFH-LGDIVNSFRRGSLIPRSGSSESPNR 247 (321)
T ss_dssp SS-BEEEEEEEE-SS-SEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE--SS-EEEEEE--SS--SSSS-TTEE
T ss_pred CCCccEEEEEEecCC-cEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEE-CCCccceEEEEEeeecCCCCccccc
Confidence 234558899998645 5889999999999997652 1 2333443 23457777 55552 22
Q ss_pred -EEEEeeccCCeEEEE
Q 022019 279 -YLYTGGRKDPYILCW 293 (304)
Q Consensus 279 -~l~~~~~~d~~i~vw 293 (304)
.++.++ .+|.|.+.
T Consensus 248 ~~i~~~T-~~G~Ig~l 262 (321)
T PF03178_consen 248 PQILYGT-VDGSIGVL 262 (321)
T ss_dssp EEEEEEE-TTS-EEEE
T ss_pred ceEEEEe-cCCEEEEE
Confidence 366666 78888743
No 357
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.92 E-value=0.0016 Score=42.49 Aligned_cols=99 Identities=23% Similarity=0.364 Sum_probs=60.5
Q ss_pred eeEEEEcC---CC-CeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 63 LKGIKWSP---DG-SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 63 V~~i~~s~---~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
|++|++.. || +.|+.|+.|..||+|+-.+ ..........+..++.. .+
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e--------------------~~~Ei~e~~~v~~L~~~--------~~ 53 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE--------------------IVAEITETDKVTSLCSL--------GG 53 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc--------------------EEEEEecccceEEEEEc--------CC
Confidence 66777765 33 4799999999999997542 22344455667777642 23
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEEC---CCC-cEEEEE-cCCeEE
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFN---PTG-TKIFAG-YNKSVR 197 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~---~~~-~~l~~~-~d~~i~ 197 (304)
..|+.+..+|+|-+|+-... .++..+.. .+.++.+. .+| ..|++| .+|.|-
T Consensus 54 ~~F~Y~l~NGTVGvY~~~~R----lWRiKSK~----~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 54 GRFAYALANGTVGVYDRSQR----LWRIKSKN----QVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred CEEEEEecCCEEEEEeCcce----eeeeccCC----CeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 56999999999999975322 22222211 34444443 333 356677 888764
No 358
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.86 E-value=0.0078 Score=53.70 Aligned_cols=61 Identities=13% Similarity=0.166 Sum_probs=46.4
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcC
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVH 202 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~ 202 (304)
...+||+|+.+|.|++||--..+....++..+ .+|.+|..+.||+++++..+..+.+++..
T Consensus 587 ~~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG-----~pI~~iDvt~DGkwilaTc~tyLlLi~t~ 647 (794)
T PF08553_consen 587 EDGYIAVGSNKGDIRLYDRLGKRAKTALPGLG-----DPIIGIDVTADGKWILATCKTYLLLIDTL 647 (794)
T ss_pred CCceEEEEeCCCcEEeecccchhhhhcCCCCC-----CCeeEEEecCCCcEEEEeecceEEEEEEe
Confidence 33469999999999999943322222333333 39999999999999999889999999874
No 359
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.82 E-value=0.011 Score=51.71 Aligned_cols=112 Identities=9% Similarity=0.065 Sum_probs=59.5
Q ss_pred ceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC
Q 022019 175 AAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN 254 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~ 254 (304)
.|..+.|+|||..++.-.++.|++--+.....-...+........+....+.++.|.+ ++.++ ++..++...+|.+.-
T Consensus 449 ~Issl~wSpDG~RiA~i~~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~-~~~L~-V~~~~~~~~v~~v~v 526 (591)
T PRK13616 449 PISELQLSRDGVRAAMIIGGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDWRT-GDSLV-VGRSDPEHPVWYVNL 526 (591)
T ss_pred CcCeEEECCCCCEEEEEECCEEEEEEEEeCCCCceeecccEEeecccCCccccceEec-CCEEE-EEecCCCCceEEEec
Confidence 7899999999999995546777773332211111122111111122333457899999 55544 555555444454332
Q ss_pred -ceEeEEecc--ccCCeEEEEECCCCcEEEEeeccCCeEE
Q 022019 255 -MELLYVLHG--QEGGVTHVQFSRDGNYLYTGGRKDPYIL 291 (304)
Q Consensus 255 -~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~d~~i~ 291 (304)
+.....+.. ....+.+++=+++ .|+.+. .+|.+.
T Consensus 527 DG~~~~~~~~~n~~~~v~~vaa~~~--~iyv~~-~~g~~~ 563 (591)
T PRK13616 527 DGSNSDALPSRNLSAPVVAVAASPS--TVYVTD-ARAVLQ 563 (591)
T ss_pred CCccccccCCCCccCceEEEecCCc--eEEEEc-CCceEE
Confidence 222112232 2456777777763 355555 566443
No 360
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.80 E-value=0.0013 Score=54.05 Aligned_cols=64 Identities=13% Similarity=0.103 Sum_probs=44.8
Q ss_pred CCCccEEEEE---------eCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCC
Q 022019 135 DPTSCVFAST---------TRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRP 204 (304)
Q Consensus 135 ~~~~~~l~~~---------~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~ 204 (304)
|||+++++.. +..+.+.+||+.+++........ ..+....|+|+|+.++-..++.|++++...+
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~~------~~~~~~~~sP~g~~~~~v~~~nly~~~~~~~ 73 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPPP------PKLQDAKWSPDGKYIAFVRDNNLYLRDLATG 73 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-EE------TTBSEEEE-SSSTEEEEEETTEEEEESSTTS
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCCc------cccccceeecCCCeeEEEecCceEEEECCCC
Confidence 4566665553 22467899999998765443331 2677999999999999888899999987653
No 361
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=97.77 E-value=0.0098 Score=45.61 Aligned_cols=188 Identities=11% Similarity=0.198 Sum_probs=112.9
Q ss_pred CCceeEEEEcCCCCeEEEecCCC--eEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC
Q 022019 60 NNFLKGIKWSPDGSSFLTSSEDK--TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (304)
....-++.|..+|.++-+.+.-| .|+.+|+.+++......... .....-....+..++.+.|
T Consensus 44 ~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~------~~FgEGit~~~d~l~qLTW---------- 107 (264)
T PF05096_consen 44 TAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPP------RYFGEGITILGDKLYQLTW---------- 107 (264)
T ss_dssp T-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TT------T--EEEEEEETTEEEEEES----------
T ss_pred cccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCc------cccceeEEEECCEEEEEEe----------
Confidence 34556788877888888887766 78999999876533222111 0011111122344555555
Q ss_pred ccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeec
Q 022019 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKG 216 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~ 216 (304)
.++...+||..+-+.+.++.... .-+.++ .++..|+.+ ....++++|..+-.. ...+.....
T Consensus 108 --------k~~~~f~yd~~tl~~~~~~~y~~------EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~-~~~i~V~~~ 170 (264)
T PF05096_consen 108 --------KEGTGFVYDPNTLKKIGTFPYPG------EGWGLT--SDGKRLIMSDGSSRLYFLDPETFKE-VRTIQVTDN 170 (264)
T ss_dssp --------SSSEEEEEETTTTEEEEEEE-SS------S--EEE--ECSSCEEEE-SSSEEEEE-TTT-SE-EEEEE-EET
T ss_pred --------cCCeEEEEccccceEEEEEecCC------cceEEE--cCCCEEEEECCccceEEECCcccce-EEEEEEEEC
Confidence 68889999999988888877653 446676 456777755 888999999765321 111111111
Q ss_pred cccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecc------------c---cCCeEEEEECCCCcEEE
Q 022019 217 NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG------------Q---EGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 217 ~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------------~---~~~v~~~~~~~~~~~l~ 281 (304)
...-..+..+.|- ++.++|=.=....|...|..+|+.+..+.- . ..-.+.++|.|....|+
T Consensus 171 --g~pv~~LNELE~i--~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~ 246 (264)
T PF05096_consen 171 --GRPVSNLNELEYI--NGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLF 246 (264)
T ss_dssp --TEE---EEEEEEE--TTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEE
T ss_pred --CEECCCcEeEEEE--cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEE
Confidence 1122346677776 466777676778899999999988776531 0 23589999998877776
Q ss_pred Eee
Q 022019 282 TGG 284 (304)
Q Consensus 282 ~~~ 284 (304)
..|
T Consensus 247 vTG 249 (264)
T PF05096_consen 247 VTG 249 (264)
T ss_dssp EEE
T ss_pred EEe
Confidence 666
No 362
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=97.68 E-value=0.0032 Score=53.07 Aligned_cols=120 Identities=13% Similarity=0.168 Sum_probs=73.7
Q ss_pred ceEEEEECCCC-----cEEEEEcCCeEEEEEcCCCCccceee--eeeeccccccccceeEEEeecCCCcEEEEEecCCeE
Q 022019 175 AAFSVAFNPTG-----TKIFAGYNKSVRVFDVHRPGRDFEKY--STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTS 247 (304)
Q Consensus 175 ~v~~i~~~~~~-----~~l~~~~d~~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i 247 (304)
.|.++.|.|-+ .+||+-....|.||.+.........+ ...-...+...--...+.|+| ...+|++-.....-
T Consensus 58 hV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHP-k~~iL~VLT~~dvS 136 (671)
T PF15390_consen 58 HVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHP-KKAILTVLTARDVS 136 (671)
T ss_pred eeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccC-CCceEEEEecCcee
Confidence 78899999853 56778899999999986322111110 011011111122245789999 67777776665554
Q ss_pred EEEecCC--ceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 248 AIYREDN--MELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 248 ~i~d~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
.+++.+. ......++ ..+-|.|.+|.+||+.|+.+-...=.-++||-.
T Consensus 137 V~~sV~~d~srVkaDi~-~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~ 186 (671)
T PF15390_consen 137 VLPSVHCDSSRVKADIK-TSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSA 186 (671)
T ss_pred EeeeeeeCCceEEEecc-CCceEEEEEecCcCCEEEEEeCCeEEEEEecCc
Confidence 5666543 33334454 467899999999999887665133345677643
No 363
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.67 E-value=0.013 Score=44.28 Aligned_cols=101 Identities=9% Similarity=0.064 Sum_probs=68.0
Q ss_pred CeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEE
Q 022019 73 SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHL 152 (304)
Q Consensus 73 ~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 152 (304)
.+++.|+..+.+.--|..++....+... +..+.+-+. . -|+.++.|...|.+++
T Consensus 24 T~v~igSHs~~~~avd~~sG~~~We~il------------------g~RiE~sa~-----v---vgdfVV~GCy~g~lYf 77 (354)
T KOG4649|consen 24 TLVVIGSHSGIVIAVDPQSGNLIWEAIL------------------GVRIECSAI-----V---VGDFVVLGCYSGGLYF 77 (354)
T ss_pred eEEEEecCCceEEEecCCCCcEEeehhh------------------CceeeeeeE-----E---ECCEEEEEEccCcEEE
Confidence 4677778888888878776654322111 111111110 0 2457999999999999
Q ss_pred EEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCC
Q 022019 153 WDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRP 204 (304)
Q Consensus 153 ~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~ 204 (304)
.+.++|+....+...... =.....++++..|++| .|++.+..|.++.
T Consensus 78 l~~~tGs~~w~f~~~~~v-----k~~a~~d~~~glIycgshd~~~yalD~~~~ 125 (354)
T KOG4649|consen 78 LCVKTGSQIWNFVILETV-----KVRAQCDFDGGLIYCGSHDGNFYALDPKTY 125 (354)
T ss_pred EEecchhheeeeeehhhh-----ccceEEcCCCceEEEecCCCcEEEeccccc
Confidence 999999877766655431 1245567889999976 9999999999874
No 364
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=97.60 E-value=0.00028 Score=51.90 Aligned_cols=141 Identities=11% Similarity=0.141 Sum_probs=84.6
Q ss_pred EEEEeCCCCEEEEEcCCCeeeEEee-cccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccc
Q 022019 141 FASTTRDHPIHLWDATTGLLRCTYR-AYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNK 218 (304)
Q Consensus 141 l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~ 218 (304)
+...+.||.|.-++++..+....-. .+. .. ...-.-+..+++| .+|.|++|.....+.-....
T Consensus 33 l~~~sa~~~v~~~~~~k~k~s~rse~~~~------e~--~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~------- 97 (238)
T KOG2444|consen 33 LRATSADGLVRERKVRKHKESCRSERFID------EG--QRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRV------- 97 (238)
T ss_pred hccccCCcccccchhhhhhhhhhhhhhhh------cc--eeecccCceEEeecccceEEEecCCccchHHHhh-------
Confidence 5555678888888876543221111 111 11 1111234556655 99999999986322111111
Q ss_pred cccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc-CCeEEEEECCCCcEEEEe--eccCCeEEEEec
Q 022019 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE-GGVTHVQFSRDGNYLYTG--GRKDPYILCWDL 295 (304)
Q Consensus 219 ~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~--~~~d~~i~vwd~ 295 (304)
......+.++--.-+.+.+.++++.||.|+.|++.-.+.+.....|. .++..+..+..+++|..+ + .|..++.|++
T Consensus 98 ~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S-~d~~~k~W~v 176 (238)
T KOG2444|consen 98 CSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTS-HDRVLKKWNV 176 (238)
T ss_pred hcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccc-cchhhhhcch
Confidence 11112222222222244588999999999999999888887777777 566666666667777777 6 7888888887
Q ss_pred cc
Q 022019 296 RK 297 (304)
Q Consensus 296 ~~ 297 (304)
..
T Consensus 177 e~ 178 (238)
T KOG2444|consen 177 EK 178 (238)
T ss_pred hh
Confidence 64
No 365
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.58 E-value=0.025 Score=45.10 Aligned_cols=141 Identities=15% Similarity=0.132 Sum_probs=81.7
Q ss_pred EEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcC------------CeEEEEEcCCCCccceeeeeeecc
Q 022019 150 IHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYN------------KSVRVFDVHRPGRDFEKYSTLKGN 217 (304)
Q Consensus 150 i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d------------~~i~v~d~~~~~~~~~~~~~~~~~ 217 (304)
+.+++.+++.....+............+.....|+|.+.++... |.++.+|.. +...+..
T Consensus 87 ~~~~~~~~~~~~t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~--g~~~~l~------ 158 (307)
T COG3386 87 VRLLDPDTGGKITLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPD--GGVVRLL------ 158 (307)
T ss_pred cEEEeccCCceeEEeccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCC--CCEEEee------
Confidence 67777766655333322222122236678899999998885422 334444431 1111111
Q ss_pred ccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC--c----e-EeEEeccccCCeEEEEECCCCcEEEEeeccCC-e
Q 022019 218 KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN--M----E-LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDP-Y 289 (304)
Q Consensus 218 ~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~--~----~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~-~ 289 (304)
..+-...+.++|||++..++++=+..+.|+-|++.. + + ....+....+..-.++...+|.+-+++. .+| .
T Consensus 159 -~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~-~~g~~ 236 (307)
T COG3386 159 -DDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAV-WGGGR 236 (307)
T ss_pred -cCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecc-cCCce
Confidence 222334578999996666666666678899888752 1 1 1222223345566778888888765554 444 8
Q ss_pred EEEEecccceee
Q 022019 290 ILCWDLRKAVQV 301 (304)
Q Consensus 290 i~vwd~~~~~~~ 301 (304)
|.+|+.. |+.+
T Consensus 237 v~~~~pd-G~l~ 247 (307)
T COG3386 237 VVRFNPD-GKLL 247 (307)
T ss_pred EEEECCC-CcEE
Confidence 9999988 6554
No 366
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=97.55 E-value=0.044 Score=47.18 Aligned_cols=211 Identities=13% Similarity=0.123 Sum_probs=110.4
Q ss_pred CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEE
Q 022019 72 GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIH 151 (304)
Q Consensus 72 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 151 (304)
+..++.++.++.|.-.|..+++............ . ....+.. ...++. ++..++.++.++.|+
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~--~---------~~~~~~~-----~g~~~~-~~~~V~v~~~~g~v~ 123 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPAD--R---------GCCDVVN-----RGVAYW-DPRKVFFGTFDGRLV 123 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCcc--c---------ccccccc-----CCcEEc-cCCeEEEecCCCeEE
Confidence 4456667778999999998887654433221000 0 0000000 000001 225677788899999
Q ss_pred EEEcCCCeeeEEeecccccccccceE-EEEECCCCcEEEEE---------cCCeEEEEEcCCCCccceeeeeeec--ccc
Q 022019 152 LWDATTGLLRCTYRAYDAVDEITAAF-SVAFNPTGTKIFAG---------YNKSVRVFDVHRPGRDFEKYSTLKG--NKE 219 (304)
Q Consensus 152 i~d~~~~~~~~~~~~~~~~~~~~~v~-~i~~~~~~~~l~~~---------~d~~i~v~d~~~~~~~~~~~~~~~~--~~~ 219 (304)
-+|.++|+.+..............+. +..+. ++.+++.+ .++.+.-+|..++............ ...
T Consensus 124 AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~-~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~ 202 (488)
T cd00216 124 ALDAETGKQVWKFGNNDQVPPGYTMTGAPTIV-KKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFP 202 (488)
T ss_pred EEECCCCCEeeeecCCCCcCcceEecCCCEEE-CCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCC
Confidence 99999999887766543200000010 11111 23333322 2578888898875433321110000 000
Q ss_pred c---------cc-c-ceeEEEeecCCCcEEEEEecCC------------------eEEEEecCCceEeEEeccccCCe--
Q 022019 220 G---------QA-G-IMSAIAFSPTHTGMLAIGSYSQ------------------TSAIYREDNMELLYVLHGQEGGV-- 268 (304)
Q Consensus 220 ~---------~~-~-~v~~~~~~p~~~~~l~~~~~dg------------------~i~i~d~~~~~~~~~~~~~~~~v-- 268 (304)
. .. . .-...++++ .+..+++++.++ .|.-+|..+++.+-.+..-....
T Consensus 203 ~~~~~~~~~~~~g~~vw~~pa~d~-~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~ 281 (488)
T cd00216 203 TWGPDRQMWGPGGGTSWASPTYDP-KTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWD 281 (488)
T ss_pred CCCCCcceecCCCCCccCCeeEeC-CCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcc
Confidence 0 00 0 011344555 344677776665 79999999999887764211111
Q ss_pred ----EEEEEC----CCCc---EEEEeeccCCeEEEEecccceeee
Q 022019 269 ----THVQFS----RDGN---YLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 269 ----~~~~~~----~~~~---~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
....+. -+|. .++.++ .+|.+...|.++|+.+-
T Consensus 282 ~~~~s~p~~~~~~~~~g~~~~~V~~g~-~~G~l~ald~~tG~~~W 325 (488)
T cd00216 282 YDGPNQPSLADIKPKDGKPVPAIVHAP-KNGFFYVLDRTTGKLIS 325 (488)
T ss_pred cccCCCCeEEeccccCCCeeEEEEEEC-CCceEEEEECCCCcEee
Confidence 011111 2343 577787 89999999999997653
No 367
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.52 E-value=0.0047 Score=51.31 Aligned_cols=124 Identities=14% Similarity=0.115 Sum_probs=75.2
Q ss_pred eecCCCCceeEEEEcCCCC--e-----EEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEee
Q 022019 55 TSSIPNNFLKGIKWSPDGS--S-----FLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCW 127 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~--~-----l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 127 (304)
..+-|.+ |+-+.+.|+.+ . -+.|-.|..|.-||.+-.... .+. .........+....|.+
T Consensus 371 EWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~-kl~----------~~q~kqy~~k~nFsc~a- 437 (644)
T KOG2395|consen 371 EWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKN-KLA----------VVQSKQYSTKNNFSCFA- 437 (644)
T ss_pred EeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcc-eee----------eeeccccccccccceee-
Confidence 3344555 77777887653 2 233556788888988732210 000 00000011112222221
Q ss_pred cCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCC
Q 022019 128 FPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHR 203 (304)
Q Consensus 128 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~ 203 (304)
.-...++++|+.+|.|++||--..+....++..+. +|..|..+.+|++|++..+.++.+.++.-
T Consensus 438 -------TT~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~-----~I~hVdvtadGKwil~Tc~tyLlLi~t~~ 501 (644)
T KOG2395|consen 438 -------TTESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGD-----AIKHVDVTADGKWILATCKTYLLLIDTLI 501 (644)
T ss_pred -------ecCCceEEEeecCCcEEeehhhhhhhhhcccccCC-----ceeeEEeeccCcEEEEecccEEEEEEEec
Confidence 12344799999999999999633333344555444 89999999999999998899999988764
No 368
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.52 E-value=0.029 Score=44.29 Aligned_cols=149 Identities=14% Similarity=0.071 Sum_probs=87.2
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeee--
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTL-- 214 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~-- 214 (304)
.++.|+.|.++| ++++++............. .|..+...|+-+.+++=.|+.++++++.............
T Consensus 6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~~------~I~ql~vl~~~~~llvLsd~~l~~~~L~~l~~~~~~~~~~~~ 78 (275)
T PF00780_consen 6 WGDRLLVGTEDG-LYVYDLSDPSKPTRILKLS------SITQLSVLPELNLLLVLSDGQLYVYDLDSLEPVSTSAPLAFP 78 (275)
T ss_pred CCCEEEEEECCC-EEEEEecCCccceeEeecc------eEEEEEEecccCEEEEEcCCccEEEEchhhcccccccccccc
Confidence 567899999999 9999983222222221111 5889999998878776667999999997643222110000
Q ss_pred e----ccccccccceeEEE--eecCCCcEEEEEecCCeEEEEecCCc-----eEeEEeccccCCeEEEEECCCCcEEEEe
Q 022019 215 K----GNKEGQAGIMSAIA--FSPTHTGMLAIGSYSQTSAIYREDNM-----ELLYVLHGQEGGVTHVQFSRDGNYLYTG 283 (304)
Q Consensus 215 ~----~~~~~~~~~v~~~~--~~p~~~~~l~~~~~dg~i~i~d~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 283 (304)
. .........+..++ -.+.+...|+ ......|.+|..... +...++.. ...+.+++|. ++.|+.|
T Consensus 79 ~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~-va~kk~i~i~~~~~~~~~f~~~~ke~~l-p~~~~~i~~~--~~~i~v~ 154 (275)
T PF00780_consen 79 KSRSLPTKLPETKGVSFFAVNGGHEGSRRLC-VAVKKKILIYEWNDPRNSFSKLLKEISL-PDPPSSIAFL--GNKICVG 154 (275)
T ss_pred ccccccccccccCCeeEEeeccccccceEEE-EEECCEEEEEEEECCcccccceeEEEEc-CCCcEEEEEe--CCEEEEE
Confidence 0 00011122233333 1122333444 444558888877542 45566653 4678999998 5667777
Q ss_pred eccCCeEEEEecccc
Q 022019 284 GRKDPYILCWDLRKA 298 (304)
Q Consensus 284 ~~~d~~i~vwd~~~~ 298 (304)
. .....+.|+.++
T Consensus 155 ~--~~~f~~idl~~~ 167 (275)
T PF00780_consen 155 T--SKGFYLIDLNTG 167 (275)
T ss_pred e--CCceEEEecCCC
Confidence 6 334778888754
No 369
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.48 E-value=0.033 Score=43.96 Aligned_cols=149 Identities=14% Similarity=0.188 Sum_probs=79.4
Q ss_pred CCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCC
Q 022019 70 PDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHP 149 (304)
Q Consensus 70 ~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~ 149 (304)
..++.|+.|+.+| +.++++...... ........|..+... ++-+.+++-+ |+.
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~------------------~~i~~~~~I~ql~vl-------~~~~~llvLs-d~~ 57 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKP------------------TRILKLSSITQLSVL-------PELNLLLVLS-DGQ 57 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccc------------------eeEeecceEEEEEEe-------cccCEEEEEc-CCc
Confidence 3578899999888 888888221110 111112236666553 3444455444 599
Q ss_pred EEEEEcCCCeeeEEee---c------ccccccccceEEEE---ECCCCcEEEEEcCCeEEEEEcCCCCccc-eeeeeeec
Q 022019 150 IHLWDATTGLLRCTYR---A------YDAVDEITAAFSVA---FNPTGTKIFAGYNKSVRVFDVHRPGRDF-EKYSTLKG 216 (304)
Q Consensus 150 i~i~d~~~~~~~~~~~---~------~~~~~~~~~v~~i~---~~~~~~~l~~~~d~~i~v~d~~~~~~~~-~~~~~~~~ 216 (304)
++++++..-....... . .........+..++ -......++++....|.+|........+ .....+.
T Consensus 58 l~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~- 136 (275)
T PF00780_consen 58 LYVYDLDSLEPVSTSAPLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS- 136 (275)
T ss_pred cEEEEchhhccccccccccccccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE-
Confidence 9999997644333110 0 00111112344444 2233456667777799999987643333 2333322
Q ss_pred cccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC
Q 022019 217 NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN 254 (304)
Q Consensus 217 ~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~ 254 (304)
....+.+++|.+ + .++.|..+ ...+.|+.+
T Consensus 137 ----lp~~~~~i~~~~-~--~i~v~~~~-~f~~idl~~ 166 (275)
T PF00780_consen 137 ----LPDPPSSIAFLG-N--KICVGTSK-GFYLIDLNT 166 (275)
T ss_pred ----cCCCcEEEEEeC-C--EEEEEeCC-ceEEEecCC
Confidence 224578888885 2 55556543 355555553
No 370
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.47 E-value=0.00058 Score=37.18 Aligned_cols=35 Identities=14% Similarity=0.263 Sum_probs=30.7
Q ss_pred cCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 265 EGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 265 ~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
...|..++|+|....||.+. .+|.|.++.+ +++++
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t-~~g~v~v~Rl-~~qri 45 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGT-EDGEVLVYRL-NWQRI 45 (47)
T ss_pred CCcEEEEEECCCCCEEEEEE-CCCeEEEEEC-CCcCc
Confidence 34699999999999999999 9999999999 66554
No 371
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=97.47 E-value=0.058 Score=46.48 Aligned_cols=150 Identities=15% Similarity=0.141 Sum_probs=85.7
Q ss_pred CCCccEEEEEeCCC------------------CEEEEEcCCCeeeEEeeccccc-----cccc-ceEEEEECCCCc---E
Q 022019 135 DPTSCVFASTTRDH------------------PIHLWDATTGLLRCTYRAYDAV-----DEIT-AAFSVAFNPTGT---K 187 (304)
Q Consensus 135 ~~~~~~l~~~~~dg------------------~i~i~d~~~~~~~~~~~~~~~~-----~~~~-~v~~i~~~~~~~---~ 187 (304)
++.+..++.++.++ .|.-+|..+|+....+...... .... .+..+. .-++. .
T Consensus 225 d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~-~~~g~~~~~ 303 (488)
T cd00216 225 DPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIK-PKDGKPVPA 303 (488)
T ss_pred eCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEecc-ccCCCeeEE
Confidence 33456677776665 6999999999988776532210 0000 111111 11232 4
Q ss_pred EEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEE-----------------EecCCeEEE
Q 022019 188 IFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAI-----------------GSYSQTSAI 249 (304)
Q Consensus 188 l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~-----------------~~~dg~i~i 249 (304)
++++ .+|.+..+|.++++...+.... ...++.+| + .+++. ...+|.+.-
T Consensus 304 V~~g~~~G~l~ald~~tG~~~W~~~~~-----------~~~~~~~~-~-~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~A 370 (488)
T cd00216 304 IVHAPKNGFFYVLDRTTGKLISARPEV-----------EQPMAYDP-G-LVYLGAFHIPLGLPPQKKKRCKKPGKGGLAA 370 (488)
T ss_pred EEEECCCceEEEEECCCCcEeeEeEee-----------ccccccCC-c-eEEEccccccccCcccccCCCCCCCceEEEE
Confidence 4555 8999999999886433321110 01122333 1 12111 124678888
Q ss_pred EecCCceEeEEecccc--------CCe--EEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 250 YREDNMELLYVLHGQE--------GGV--THVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 250 ~d~~~~~~~~~~~~~~--------~~v--~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
.|+.+++.+-+..... .+. ..+.. .+..|+.++ .||.|+.+|.++|+.+
T Consensus 371 lD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~--~g~~v~~g~-~dG~l~ald~~tG~~l 429 (488)
T cd00216 371 LDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLAT--AGNLVFAGA-ADGYFRAFDATTGKEL 429 (488)
T ss_pred EeCCCCcEeeEeeCCccccccccCCcccCcceEe--cCCeEEEEC-CCCeEEEEECCCCcee
Confidence 8998888776665321 111 12222 467888888 8999999999999765
No 372
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.45 E-value=0.026 Score=42.81 Aligned_cols=136 Identities=13% Similarity=0.067 Sum_probs=84.9
Q ss_pred ccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeec
Q 022019 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKG 216 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~ 216 (304)
..+++.|+..+.+.--|..+|+....-.... .+.+-+.- -|.+++.| ..|.+++.+..+++..... ...
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~ilg~------RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f-~~~-- 92 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAILGV------RIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNF-VIL-- 92 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehhhCc------eeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeee-eeh--
Confidence 3478888889999999999988765433322 22221111 36677766 9999999999886432221 111
Q ss_pred cccccccce-eEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEE
Q 022019 217 NKEGQAGIM-SAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYIL 291 (304)
Q Consensus 217 ~~~~~~~~v-~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~ 291 (304)
+.| ......+ ++.++.+|+.|+..+..|.++..++...+...+...+-+..|-...|+.+. ..|.+.
T Consensus 93 ------~~vk~~a~~d~-~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~-t~G~vl 160 (354)
T KOG4649|consen 93 ------ETVKVRAQCDF-DGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAI-TAGAVL 160 (354)
T ss_pred ------hhhccceEEcC-CCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEe-ccceEE
Confidence 111 1233455 566999999999999999999999888775444455556666222333333 344433
No 373
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=97.45 E-value=0.025 Score=46.78 Aligned_cols=149 Identities=13% Similarity=0.101 Sum_probs=75.2
Q ss_pred CccceeCCCccEEEEEe-----------CCC-CEEEEEcCC--CeeeEEeecccccccccceEEEEECCCCcEEEEEcCC
Q 022019 129 PHMSASDPTSCVFASTT-----------RDH-PIHLWDATT--GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNK 194 (304)
Q Consensus 129 ~~~~~~~~~~~~l~~~~-----------~dg-~i~i~d~~~--~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~ 194 (304)
|..++++++|+++++-. ..+ .|.+++-.+ |+........... .....+++.+++ ++++...
T Consensus 16 P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l---~~p~Gi~~~~~G-lyV~~~~- 90 (367)
T TIGR02604 16 PIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEEL---SMVTGLAVAVGG-VYVATPP- 90 (367)
T ss_pred CceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCC---CCccceeEecCC-EEEeCCC-
Confidence 44456688898877753 223 676665432 3322111111111 145789999988 4444444
Q ss_pred eEEEE-EcCCCCccceeeeeeeccccc----cccceeEEEeecCCCcEEEEEec-------------------CCeEEEE
Q 022019 195 SVRVF-DVHRPGRDFEKYSTLKGNKEG----QAGIMSAIAFSPTHTGMLAIGSY-------------------SQTSAIY 250 (304)
Q Consensus 195 ~i~v~-d~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~p~~~~~l~~~~~-------------------dg~i~i~ 250 (304)
.|..| |.......-.....+...... +......++|.| ++.++++-+. .|.|.-+
T Consensus 91 ~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gp-DG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~ 169 (367)
T TIGR02604 91 DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGP-DGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRY 169 (367)
T ss_pred eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECC-CCCEEEecccCCCceeccCCCccCcccccCceEEEE
Confidence 45434 554322111011111111111 233467899999 5555554331 1445666
Q ss_pred ecCCceEeEEeccccCCeEEEEECCCCcEEEEee
Q 022019 251 REDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 251 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
|...++....-.++ .....++|+|+|.++++-.
T Consensus 170 ~pdg~~~e~~a~G~-rnp~Gl~~d~~G~l~~tdn 202 (367)
T TIGR02604 170 NPDGGKLRVVAHGF-QNPYGHSVDSWGDVFFCDN 202 (367)
T ss_pred ecCCCeEEEEecCc-CCCccceECCCCCEEEEcc
Confidence 66554432222333 2347899999998876644
No 374
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.44 E-value=0.033 Score=43.08 Aligned_cols=165 Identities=12% Similarity=0.100 Sum_probs=103.6
Q ss_pred CeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEE
Q 022019 120 ESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRV 198 (304)
Q Consensus 120 ~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v 198 (304)
..+.++.| +|+.+.|++......-.++=-..|+.+.+++...-. ....|.+..+|++.++. .++.+.+
T Consensus 86 ~nvS~LTy-------np~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~----DpE~Ieyig~n~fvi~dER~~~l~~ 154 (316)
T COG3204 86 ANVSSLTY-------NPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFS----DPETIEYIGGNQFVIVDERDRALYL 154 (316)
T ss_pred ccccceee-------CCCcceEEEecCCCceEEEEecCCceEEEecccccC----ChhHeEEecCCEEEEEehhcceEEE
Confidence 34677777 778888888888877777776789998888765532 44578888888888887 8999999
Q ss_pred EEcCCCCccceeee-ee-eccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEe---EEeccc-------cC
Q 022019 199 FDVHRPGRDFEKYS-TL-KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELL---YVLHGQ-------EG 266 (304)
Q Consensus 199 ~d~~~~~~~~~~~~-~~-~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~-------~~ 266 (304)
+.+........... .+ .............++|+| ..+.|+.+=+-.-+.||........ .....+ -.
T Consensus 155 ~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~-~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~ 233 (316)
T COG3204 155 FTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDP-VDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVL 233 (316)
T ss_pred EEEcCCccEEeccceEEeccccCCCCcCceeeecCC-CCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEee
Confidence 98876433221111 11 111122245578999999 5556666767677777766432211 111111 12
Q ss_pred CeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 267 GVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 267 ~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
.|.++.|++....|+.-|..++.+.-.|..
T Consensus 234 DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~ 263 (316)
T COG3204 234 DVSGLEFNAITNSLLVLSDESRRLLEVDLS 263 (316)
T ss_pred ccccceecCCCCcEEEEecCCceEEEEecC
Confidence 477788887554444444266666666554
No 375
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.40 E-value=0.045 Score=43.69 Aligned_cols=211 Identities=12% Similarity=0.105 Sum_probs=116.4
Q ss_pred eEEEEcCCCCeEEEec----------CCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 64 KGIKWSPDGSSFLTSS----------EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 64 ~~i~~s~~~~~l~s~~----------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
-.+..+|+++.+++++ ..-.|.+||..+.....++. ++.+.....+ -.+...+
T Consensus 39 ~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~----------------iP~k~R~~~~-~~~~~~~ 101 (342)
T PF06433_consen 39 GNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIE----------------IPPKPRAQVV-PYKNMFA 101 (342)
T ss_dssp EEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEE----------------ETTS-B--BS---GGGEE
T ss_pred CceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEe----------------cCCcchheec-ccccceE
Confidence 3467899999887643 33468999998654433222 2211111111 1334456
Q ss_pred eCCCccEEEEEeC--CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceee
Q 022019 134 SDPTSCVFASTTR--DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 134 ~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~ 211 (304)
++.+++++++... .-+|.|-|+..++.+..+..++. ..+-=.++..+...+.||.+.-..+...++.....
T Consensus 102 ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PGC-------~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~ 174 (342)
T PF06433_consen 102 LSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPGC-------WLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKS 174 (342)
T ss_dssp E-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTSE-------EEEEEEETTEEEEEETTSCEEEEEETSTSSEEEEE
T ss_pred EccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCCE-------EEEEecCCCceEEEecCCceEEEEECCCCCEeEee
Confidence 6888888777643 45799999999998888877652 12211223345557799999999998655543221
Q ss_pred eeeecccccccc-ceeEEEeecCCCcEEEEEecCCeEEEEecCCceE--eEEeccc----------cCCeEEEEECCCCc
Q 022019 212 STLKGNKEGQAG-IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL--LYVLHGQ----------EGGVTHVQFSRDGN 278 (304)
Q Consensus 212 ~~~~~~~~~~~~-~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~----------~~~v~~~~~~~~~~ 278 (304)
.. .+..... .+..-++...++ .++--+.+|.|+-.|+..... ...+..- .+.-.-+++++...
T Consensus 175 t~---~F~~~~dp~f~~~~~~~~~~-~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~ 250 (342)
T PF06433_consen 175 TK---VFDPDDDPLFEHPAYSRDGG-RLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASG 250 (342)
T ss_dssp EE---ESSTTTS-B-S--EEETTTT-EEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTT
T ss_pred cc---ccCCCCcccccccceECCCC-eEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccC
Confidence 11 2222222 233444555334 444478899999999875542 2222210 12344577877665
Q ss_pred EEEEee-------ccCC--eEEEEecccceeee
Q 022019 279 YLYTGG-------RKDP--YILCWDLRKAVQVV 302 (304)
Q Consensus 279 ~l~~~~-------~~d~--~i~vwd~~~~~~~~ 302 (304)
.|+..- -+|+ .|-++|+.+++++.
T Consensus 251 rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~ 283 (342)
T PF06433_consen 251 RLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVA 283 (342)
T ss_dssp EEEEEEEE--TT-TTS-EEEEEEEETTTTEEEE
T ss_pred eEEEEecCCCCCCccCCceEEEEEECCCCeEEE
Confidence 555442 0122 47777888887763
No 376
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=97.39 E-value=0.035 Score=46.31 Aligned_cols=142 Identities=15% Similarity=0.184 Sum_probs=94.8
Q ss_pred EEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCC--------cEEEEEcCCeEEEEEcCCCCccceeee
Q 022019 141 FASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG--------TKIFAGYNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 141 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~--------~~l~~~~d~~i~v~d~~~~~~~~~~~~ 212 (304)
+..|+....++-.|++.|+.+..+..+.. + -+.|.|+. +.|+.-.+..|.-.|.|..+..+....
T Consensus 483 ~~dg~~~~kLykmDIErGkvveeW~~~dd------v-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~e 555 (776)
T COG5167 483 YLDGGERDKLYKMDIERGKVVEEWDLKDD------V-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVE 555 (776)
T ss_pred EecCCCcccceeeecccceeeeEeecCCc------c-eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeee
Confidence 44455666788889999999999888763 3 57777753 233332777787788877553322211
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
... ........+..-. ...++++|+..|.|++||--.-..-..+++-...|..+..+.+|.+|++.+ ...|.+
T Consensus 556 sKd---Y~tKn~Fss~~tT--esGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTC--k~yllL 628 (776)
T COG5167 556 SKD---YKTKNKFSSGMTT--ESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATC--KNYLLL 628 (776)
T ss_pred ehh---ccccccccccccc--cCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEee--cceEEE
Confidence 110 1111122233322 334899999999999999654444556777788899999999999999887 667888
Q ss_pred Eecc
Q 022019 293 WDLR 296 (304)
Q Consensus 293 wd~~ 296 (304)
-|++
T Consensus 629 ~d~~ 632 (776)
T COG5167 629 TDVP 632 (776)
T ss_pred Eecc
Confidence 8774
No 377
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.38 E-value=0.066 Score=45.15 Aligned_cols=200 Identities=19% Similarity=0.189 Sum_probs=102.3
Q ss_pred ceeEEEEcCCCCeEEEe-cCC----CeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCC
Q 022019 62 FLKGIKWSPDGSSFLTS-SED----KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP 136 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~-~~d----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 136 (304)
.+...+++|+|+++|.+ +.. ..++++|+.+++..... +.. .....+.| .+
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~---------------i~~---~~~~~~~W-------~~ 179 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDG---------------IEN---PKFSSVSW-------SD 179 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEE---------------EEE---EESEEEEE-------CT
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCc---------------ccc---cccceEEE-------eC
Confidence 34468899999988854 222 45999999876332110 000 11112566 66
Q ss_pred CccEEEEEeCCC-----------CEEEEEcCCCeee--EEeecccccccccceEEEEECCCCcEEEE--E--cC-CeEEE
Q 022019 137 TSCVFASTTRDH-----------PIHLWDATTGLLR--CTYRAYDAVDEITAAFSVAFNPTGTKIFA--G--YN-KSVRV 198 (304)
Q Consensus 137 ~~~~l~~~~~dg-----------~i~i~d~~~~~~~--~~~~~~~~~~~~~~v~~i~~~~~~~~l~~--~--~d-~~i~v 198 (304)
+++.|+....+. .|+.|.+.+.... ..+..... ......+..++++++++. . .+ ..+++
T Consensus 180 d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~---~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~ 256 (414)
T PF02897_consen 180 DGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDE---PFWFVSVSRSKDGRYLFISSSSGTSESEVYL 256 (414)
T ss_dssp TSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTC---TTSEEEEEE-TTSSEEEEEEESSSSEEEEEE
T ss_pred CCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCC---CcEEEEEEecCcccEEEEEEEccccCCeEEE
Confidence 777666654332 3778887765433 33443332 112568899999999883 2 33 45788
Q ss_pred EEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEec---CCeEEEEecCCceE---eEEeccccCC--eEE
Q 022019 199 FDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY---SQTSAIYREDNMEL---LYVLHGQEGG--VTH 270 (304)
Q Consensus 199 ~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~---dg~i~i~d~~~~~~---~~~~~~~~~~--v~~ 270 (304)
.|+............+.... .+....+... ++.+++.... ++.|.-.++..... ...+..+... +..
T Consensus 257 ~d~~~~~~~~~~~~~l~~~~---~~~~~~v~~~--~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~ 331 (414)
T PF02897_consen 257 LDLDDGGSPDAKPKLLSPRE---DGVEYYVDHH--GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLED 331 (414)
T ss_dssp EECCCTTTSS-SEEEEEESS---SS-EEEEEEE--TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEE
T ss_pred EeccccCCCcCCcEEEeCCC---CceEEEEEcc--CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEE
Confidence 88875311111122222111 1222233333 4444444432 45677777776542 2244445553 444
Q ss_pred EEECCCCcEEEEeeccCC--eEEEEecc
Q 022019 271 VQFSRDGNYLYTGGRKDP--YILCWDLR 296 (304)
Q Consensus 271 ~~~~~~~~~l~~~~~~d~--~i~vwd~~ 296 (304)
+.. .+.+|+.....++ .|+++++.
T Consensus 332 ~~~--~~~~Lvl~~~~~~~~~l~v~~~~ 357 (414)
T PF02897_consen 332 VSL--FKDYLVLSYRENGSSRLRVYDLD 357 (414)
T ss_dssp EEE--ETTEEEEEEEETTEEEEEEEETT
T ss_pred EEE--ECCEEEEEEEECCccEEEEEECC
Confidence 444 4555555543555 57888887
No 378
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.38 E-value=0.00086 Score=36.50 Aligned_cols=31 Identities=16% Similarity=0.370 Sum_probs=28.5
Q ss_pred CCceeEEEEcCCCCeEEEecCCCeEEEeeCC
Q 022019 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLP 90 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~ 90 (304)
...|.+++|+|..++||.++.||.|.++.+.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 4569999999999999999999999999984
No 379
>PHA02713 hypothetical protein; Provisional
Probab=97.37 E-value=0.017 Score=50.41 Aligned_cols=63 Identities=6% Similarity=0.089 Sum_probs=40.4
Q ss_pred CCcEEEEEecC------CeEEEEecCC---ceEeEEeccccCCeEEEEECCCCcEEEEeeccCC--eEEEEecccce
Q 022019 234 HTGMLAIGSYS------QTSAIYREDN---MELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDP--YILCWDLRKAV 299 (304)
Q Consensus 234 ~~~~l~~~~~d------g~i~i~d~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~--~i~vwd~~~~~ 299 (304)
++.+++.|+.+ ..+..||..+ ++.+..+.........+.+ +|+..++|| .|| .+-.||..+.+
T Consensus 463 ~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg-~~~~~~~e~yd~~~~~ 536 (557)
T PHA02713 463 KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH--DNTIMMLHC-YESYMLQDTFNVYTYE 536 (557)
T ss_pred CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE--CCEEEEEee-ecceeehhhcCccccc
Confidence 45677878754 2467899876 3445555443334444444 577778888 788 77788877654
No 380
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.35 E-value=0.023 Score=49.71 Aligned_cols=151 Identities=12% Similarity=0.153 Sum_probs=76.5
Q ss_pred cceeCCCccEEEEEe------CCC--CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCC--eEEEEE
Q 022019 131 MSASDPTSCVFASTT------RDH--PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNK--SVRVFD 200 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~------~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~--~i~v~d 200 (304)
..+++|+|+.++... .|. .|.+++. .+.. ..+.. .. ....-.|+|+|..++...++ .+++.+
T Consensus 354 spaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~-~~lt~-g~-----~~t~PsWspDG~~lw~v~dg~~~~~v~~ 425 (591)
T PRK13616 354 SAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVA-VQVLE-GH-----SLTRPSWSLDADAVWVVVDGNTVVRVIR 425 (591)
T ss_pred cceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcc-eeeec-CC-----CCCCceECCCCCceEEEecCcceEEEec
Confidence 456789998887765 243 4555554 2222 22221 11 35678999998877743222 233322
Q ss_pred cCCCCccceeeeeeec-cc-cccccceeEEEeecCCCcEEEEEecCCeEEE---EecCCce-Ee---EEec-cccCCeEE
Q 022019 201 VHRPGRDFEKYSTLKG-NK-EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAI---YREDNME-LL---YVLH-GQEGGVTH 270 (304)
Q Consensus 201 ~~~~~~~~~~~~~~~~-~~-~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i---~d~~~~~-~~---~~~~-~~~~~v~~ 270 (304)
-...+ ..... .... .. ......|..+.|+||+.+++++. +|.|++ -....+. .+ ..+. +-...+.+
T Consensus 426 ~~~~g-ql~~~-~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~--~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~ 501 (591)
T PRK13616 426 DPATG-QLART-PVDASAVASRVPGPISELQLSRDGVRAAMII--GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVS 501 (591)
T ss_pred cCCCc-eEEEE-eccCchhhhccCCCcCeEEECCCCCEEEEEE--CCEEEEEEEEeCCCCceeecccEEeecccCCcccc
Confidence 21110 10000 0000 00 01234699999999555444443 477777 4444443 11 1122 22334688
Q ss_pred EEECCCCcEEEEeeccCCeEEEEec
Q 022019 271 VQFSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 271 ~~~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
+.|.+++..+ .+. .++.-.+|.+
T Consensus 502 l~W~~~~~L~-V~~-~~~~~~v~~v 524 (591)
T PRK13616 502 LDWRTGDSLV-VGR-SDPEHPVWYV 524 (591)
T ss_pred ceEecCCEEE-EEe-cCCCCceEEE
Confidence 9999999855 444 4444445543
No 381
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.31 E-value=0.07 Score=43.88 Aligned_cols=142 Identities=15% Similarity=0.143 Sum_probs=75.6
Q ss_pred CCCccEEEE--EeCCC---CEEEEEcCCCeeeEEeecccccccccceEEEEEC-CCCcEEE-EE-cCCeEEEEEcCCCCc
Q 022019 135 DPTSCVFAS--TTRDH---PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFN-PTGTKIF-AG-YNKSVRVFDVHRPGR 206 (304)
Q Consensus 135 ~~~~~~l~~--~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~-~~~~~l~-~~-~d~~i~v~d~~~~~~ 206 (304)
.+++..|+. ..++. .+.++|..++........... .-......+.|. +++..++ .+ .+|.-+||-+...+.
T Consensus 192 ~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~-~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~ 270 (353)
T PF00930_consen 192 SPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSD-GWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGG 270 (353)
T ss_dssp EETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESS-SSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSS
T ss_pred cCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCC-cceeeecccccccCCCCEEEEEEEcCCCcEEEEEccccc
Confidence 556663333 23332 367778877765544433221 111122355554 6665555 55 777665555544332
Q ss_pred cceeeeeeecccccccccee-EEEeecCCCcEEEEEecCC----eEEEEecCCceEeEEeccccCCeEEEEECCCCcEEE
Q 022019 207 DFEKYSTLKGNKEGQAGIMS-AIAFSPTHTGMLAIGSYSQ----TSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~v~-~~~~~p~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 281 (304)
... .+ ....-.|. -+.++++++.+++++..++ .++..++..+..+..+....+.-..+.|||+|++++
T Consensus 271 ~~~---~l----T~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v 343 (353)
T PF00930_consen 271 KPR---QL----TSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYV 343 (353)
T ss_dssp EEE---ES----S-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEE
T ss_pred cee---cc----ccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEE
Confidence 211 11 22223353 4778887777778887643 466666662334455654333337999999999987
Q ss_pred Eee
Q 022019 282 TGG 284 (304)
Q Consensus 282 ~~~ 284 (304)
...
T Consensus 344 ~~~ 346 (353)
T PF00930_consen 344 DTY 346 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 655
No 382
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=97.30 E-value=0.075 Score=44.16 Aligned_cols=102 Identities=17% Similarity=0.288 Sum_probs=59.6
Q ss_pred EEEEcCCCCeEEEecCCCeEEE---eeCCCCCC---ccccccccccccCCccceEEEeecCCeEEEEeecCccce----e
Q 022019 65 GIKWSPDGSSFLTSSEDKTLRI---FSLPENGI---SYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA----S 134 (304)
Q Consensus 65 ~i~~s~~~~~l~s~~~dg~v~v---wd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~ 134 (304)
.++.+|+++.||.+..+..+.+ |+...... .+...... .+....+..|+++.|.|-... -
T Consensus 6 ~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g----------~l~~~~~e~ITsi~clpl~s~~~s~~ 75 (415)
T PF14655_consen 6 SISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSG----------PLDDEPGECITSILCLPLSSQKRSTG 75 (415)
T ss_pred eEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeee----------eccCCCCCEEEEEEEEEeecccccCC
Confidence 4788999999999988776665 54422110 00100000 011112257888888764222 1
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEEC
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFN 182 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~ 182 (304)
.+|...+++|..+|.|++|.. +|..+..-..|.. +|..+.+.
T Consensus 76 ~~dw~~I~VG~ssG~vrfyte-~G~LL~~Q~~h~~-----pV~~ik~~ 117 (415)
T PF14655_consen 76 GPDWTCIAVGTSSGYVRFYTE-NGVLLLSQLLHEE-----PVLKIKCR 117 (415)
T ss_pred CCCcEEEEEEecccEEEEEec-cchHHHHHhcCcc-----ceEEEEec
Confidence 367889999999999999985 5554433333332 56565553
No 383
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=97.29 E-value=0.06 Score=42.77 Aligned_cols=146 Identities=16% Similarity=0.190 Sum_probs=72.9
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~ 214 (304)
+++|+++++++......-||--.......-.. ....|.+|.|+|++.+.+++..|.|+.=+..... ..+...
T Consensus 153 ~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~-----~~~riq~~gf~~~~~lw~~~~Gg~~~~s~~~~~~---~~w~~~ 224 (302)
T PF14870_consen 153 SSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRN-----SSRRIQSMGFSPDGNLWMLARGGQIQFSDDPDDG---ETWSEP 224 (302)
T ss_dssp -TTS-EEEEETTSSEEEEE-TT-SS-EEEE-------SSS-EEEEEE-TTS-EEEEETTTEEEEEE-TTEE---EEE---
T ss_pred CCCCcEEEEECcccEEEEecCCCccceEEccC-----ccceehhceecCCCCEEEEeCCcEEEEccCCCCc---cccccc
Confidence 67888777776555445666432211111111 1238999999999988888899999888732211 111221
Q ss_pred eccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec---cccCCeEEEEECCCCcEEEEeeccCCeEE
Q 022019 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH---GQEGGVTHVQFSRDGNYLYTGGRKDPYIL 291 (304)
Q Consensus 215 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~d~~i~ 291 (304)
..........+..++|.+ ...+.++|+ .|.+ +...+.++.-..-+ .-...++.+.|.++.+-++.| .+|.|.
T Consensus 225 ~~~~~~~~~~~ld~a~~~-~~~~wa~gg-~G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~lG--~~G~ll 299 (302)
T PF14870_consen 225 IIPIKTNGYGILDLAYRP-PNEIWAVGG-SGTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVLG--QDGVLL 299 (302)
T ss_dssp B-TTSS--S-EEEEEESS-SS-EEEEES-TT-E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE---STTEEE
T ss_pred cCCcccCceeeEEEEecC-CCCEEEEeC-CccE-EEeCCCCccceECccccCCCCceEEEEEcCCCceEEEC--CCcEEE
Confidence 111112233478999998 565666554 4544 44445555433333 234568999997666656655 589887
Q ss_pred EE
Q 022019 292 CW 293 (304)
Q Consensus 292 vw 293 (304)
-|
T Consensus 300 ~~ 301 (302)
T PF14870_consen 300 RY 301 (302)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 384
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.20 E-value=0.0022 Score=57.51 Aligned_cols=102 Identities=19% Similarity=0.225 Sum_probs=72.1
Q ss_pred CCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec
Q 022019 184 TGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH 262 (304)
Q Consensus 184 ~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 262 (304)
.+..++.| ..|.+-..|+...- .. ......-.++|++++|+. ++.+++.|-.+|.|.+||...+++++.+.
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL------~~-~~~ne~v~~~Vtsvafn~-dg~~l~~G~~~G~V~v~D~~~~k~l~~i~ 169 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNL------GP-LHQNERVQGPVTSVAFNQ-DGSLLLAGLGDGHVTVWDMHRAKILKVIT 169 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhccc------ch-hhcCCccCCcceeeEecC-CCceeccccCCCcEEEEEccCCcceeeee
Confidence 34556655 77888888886521 11 112234467899999999 88899999999999999999999888888
Q ss_pred cccCCeEE---EEECCCCcEEEEeeccCCeEEEEecc
Q 022019 263 GQEGGVTH---VQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 263 ~~~~~v~~---~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
.|..+.++ +.+..++..++++. ..|. +|++.
T Consensus 170 e~~ap~t~vi~v~~t~~nS~llt~D-~~Gs--f~~lv 203 (1206)
T KOG2079|consen 170 EHGAPVTGVIFVGRTSQNSKLLTSD-TGGS--FWKLV 203 (1206)
T ss_pred ecCCccceEEEEEEeCCCcEEEEcc-CCCc--eEEEE
Confidence 66665444 44455666677776 5564 67653
No 385
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=97.19 E-value=0.03 Score=47.49 Aligned_cols=125 Identities=12% Similarity=0.154 Sum_probs=71.9
Q ss_pred CCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCC-----CeeeEEeecccccccccceEEEEECCCCcEEEEE-c
Q 022019 119 GESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT-----GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y 192 (304)
Q Consensus 119 ~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-----~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~ 192 (304)
-..|..+.|.|...+-.| .+++......|.+|-+.- ++........-.....--..+..|+|....|++= .
T Consensus 56 FEhV~GlsW~P~~~~~~p---aLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~ 132 (671)
T PF15390_consen 56 FEHVHGLSWAPPCTADTP---ALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTA 132 (671)
T ss_pred cceeeeeeecCcccCCCC---ceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEec
Confidence 368999999887554332 355555677899998852 2222221111100001123478899999888853 3
Q ss_pred CCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC
Q 022019 193 NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (304)
Q Consensus 193 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~ 253 (304)
...-.+++++..+...+. . -...+.|.|.+|.+|+.+++++.+..=.-+|||-.
T Consensus 133 ~dvSV~~sV~~d~srVka--D-----i~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~ 186 (671)
T PF15390_consen 133 RDVSVLPSVHCDSSRVKA--D-----IKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSA 186 (671)
T ss_pred CceeEeeeeeeCCceEEE--e-----ccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCc
Confidence 333345666554322221 1 12356699999999666666555555557888853
No 386
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=97.13 E-value=0.11 Score=42.84 Aligned_cols=219 Identities=12% Similarity=0.156 Sum_probs=93.5
Q ss_pred CCC-CceeEEEEcC-----------CCCeEEEec-CCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEE
Q 022019 58 IPN-NFLKGIKWSP-----------DGSSFLTSS-EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYD 124 (304)
Q Consensus 58 ~h~-~~V~~i~~s~-----------~~~~l~s~~-~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 124 (304)
++. +.....-|+. +.++|+..+ .++.|.|.|+.+......+... +. . ..+..
T Consensus 61 p~~GDElHH~GWNaCSsc~~~~~~~~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~Kv------------Ie--~-~ev~~ 125 (461)
T PF05694_consen 61 PNRGDELHHSGWNACSSCHYGDPSKERRYLILPGLRSSRIYVIDTKTDPRKPRLHKV------------IE--P-EEVFE 125 (461)
T ss_dssp SSS---B---EES--GGSTT--TT--S-EEEEEBTTT--EEEEE--S-TTS-EEEEE------------E---H-HHHHH
T ss_pred CCCCCccccccCcccccccCCCCcccCCcEEeeeeccCcEEEEECCCCCCCCceEee------------eC--H-HHHHh
Confidence 443 5777777862 345777666 6789999999854321111100 00 0 00000
Q ss_pred --EeecCccceeCCCccEEEEEeC------CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEc----
Q 022019 125 --FCWFPHMSASDPTSCVFASTTR------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGY---- 192 (304)
Q Consensus 125 --~~~~~~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~---- 192 (304)
-.-.|+..-.-|+|+.++++-. -|-+.+.|-++.+....+..... ....-+.+-|.|..+.++++.
T Consensus 126 k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~tf~v~g~We~~~~--~~~~gYDfw~qpr~nvMiSSeWg~P 203 (461)
T PF05694_consen 126 KTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGETFEVKGRWEKDRG--PQPFGYDFWYQPRHNVMISSEWGAP 203 (461)
T ss_dssp HH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TTT--EEEE--SB-T--T------EEEETTTTEEEE-B---H
T ss_pred hcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCccccccceeccCCC--CCCCCCCeEEcCCCCEEEEeccCCh
Confidence 0001222222567888887632 24578888877777766655332 122456788888888777542
Q ss_pred -----------------CCeEEEEEcCCCCccceeeeeeeccccccccceeEEEee--cCCCcEEEEEecCCeEEEEec-
Q 022019 193 -----------------NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFS--PTHTGMLAIGSYSQTSAIYRE- 252 (304)
Q Consensus 193 -----------------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--p~~~~~l~~~~~dg~i~i~d~- 252 (304)
..++.+||+... +..+.+... .....+..+.|. |....-++.+.-.+.|..|--
T Consensus 204 ~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r----~~~Q~idLg--~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~ 277 (461)
T PF05694_consen 204 SMFEKGFNPEDLEAGKYGHSLHVWDWSTR----KLLQTIDLG--EEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKD 277 (461)
T ss_dssp HHHTT---TTTHHHH-S--EEEEEETTTT----EEEEEEES---TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-
T ss_pred hhcccCCChhHhhcccccCeEEEEECCCC----cEeeEEecC--CCCCceEEEEecCCCCccceEEEEeccceEEEEEEc
Confidence 357999999873 222222211 111234456664 422333333334445554432
Q ss_pred CCce----EeEEeccc-----------------cCCeEEEEECCCCcEEEEeeccCCeEEEEecccce
Q 022019 253 DNME----LLYVLHGQ-----------------EGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 253 ~~~~----~~~~~~~~-----------------~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
+.++ .+..+... ..-|+.+..|.|.++|+.++-.+|.|+-||+....
T Consensus 278 ~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~ 345 (461)
T PF05694_consen 278 DDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPF 345 (461)
T ss_dssp ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTT
T ss_pred CCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCC
Confidence 3332 22223211 23479999999999999988889999999998743
No 387
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.13 E-value=0.13 Score=43.40 Aligned_cols=111 Identities=15% Similarity=0.148 Sum_probs=63.4
Q ss_pred eeCCCccEEEEE-eCCC----CEEEEEcCCCeeeEEe-ecccccccccceEEEEECCCCcEEE-EEc-----------CC
Q 022019 133 ASDPTSCVFAST-TRDH----PIHLWDATTGLLRCTY-RAYDAVDEITAAFSVAFNPTGTKIF-AGY-----------NK 194 (304)
Q Consensus 133 ~~~~~~~~l~~~-~~dg----~i~i~d~~~~~~~~~~-~~~~~~~~~~~v~~i~~~~~~~~l~-~~~-----------d~ 194 (304)
.++|+|++++.+ +..| .++++|+.+++.+... ... ....+.|.++++.++ +.. ..
T Consensus 130 ~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~-------~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~ 202 (414)
T PF02897_consen 130 SVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP-------KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPR 202 (414)
T ss_dssp EETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE-------ESEEEEECTTSSEEEEEECSTTTSS-CCGCCE
T ss_pred eECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc-------ccceEEEeCCCCEEEEEEeCcccccccCCCCc
Confidence 348999988766 4444 4999999999765432 211 223499999988777 542 22
Q ss_pred eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEE-EecC---CeEEEEecCCc
Q 022019 195 SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAI-GSYS---QTSAIYREDNM 255 (304)
Q Consensus 195 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~-~~~d---g~i~i~d~~~~ 255 (304)
.|+.|.+.++...-..+.. . .........+..+++ +++++. .... ..+++.|+..+
T Consensus 203 ~v~~~~~gt~~~~d~lvfe---~-~~~~~~~~~~~~s~d-~~~l~i~~~~~~~~s~v~~~d~~~~ 262 (414)
T PF02897_consen 203 QVYRHKLGTPQSEDELVFE---E-PDEPFWFVSVSRSKD-GRYLFISSSSGTSESEVYLLDLDDG 262 (414)
T ss_dssp EEEEEETTS-GGG-EEEEC-----TTCTTSEEEEEE-TT-SSEEEEEEESSSSEEEEEEEECCCT
T ss_pred EEEEEECCCChHhCeeEEe---e-cCCCcEEEEEEecCc-ccEEEEEEEccccCCeEEEEecccc
Confidence 3777777654322111111 1 111112567888994 455554 3332 34788888764
No 388
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=97.04 E-value=0.19 Score=43.76 Aligned_cols=209 Identities=12% Similarity=0.121 Sum_probs=111.1
Q ss_pred CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEE
Q 022019 72 GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIH 151 (304)
Q Consensus 72 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 151 (304)
+..++.++.++.|.-.|..+++............ . ....+.......+++ .+..++.++.|+.+.
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~----~---------~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ 133 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDD----V---------IPVMCCDVVNRGVAL--YDGKVFFGTLDARLV 133 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCcc----c---------ccccccccccccceE--ECCEEEEEcCCCEEE
Confidence 4566677778889999998887655433211000 0 000000000000111 233566778899999
Q ss_pred EEEcCCCeeeEEeecccccccccceEEEEECC---CCcEEEEE------cCCeEEEEEcCCCCccceeeeeeec------
Q 022019 152 LWDATTGLLRCTYRAYDAVDEITAAFSVAFNP---TGTKIFAG------YNKSVRVFDVHRPGRDFEKYSTLKG------ 216 (304)
Q Consensus 152 i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~---~~~~l~~~------~d~~i~v~d~~~~~~~~~~~~~~~~------ 216 (304)
-.|.++|+.+......... .-..+.-+| ++..++.. .+|.|.-+|.+++............
T Consensus 134 ALDa~TGk~~W~~~~~~~~----~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~ 209 (527)
T TIGR03075 134 ALDAKTGKVVWSKKNGDYK----AGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDK 209 (527)
T ss_pred EEECCCCCEEeeccccccc----ccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccc
Confidence 9999999987665532210 000111122 34444422 2678999998876433221111100
Q ss_pred -------cc-----------cccccceeEEEeecCCCcEEEEEecC-----C-----------eEEEEecCCceEeEEec
Q 022019 217 -------NK-----------EGQAGIMSAIAFSPTHTGMLAIGSYS-----Q-----------TSAIYREDNMELLYVLH 262 (304)
Q Consensus 217 -------~~-----------~~~~~~v~~~~~~p~~~~~l~~~~~d-----g-----------~i~i~d~~~~~~~~~~~ 262 (304)
.. .+....-..+++.| ...++..+..+ + .|.-.|+++++..-.++
T Consensus 210 ~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~-~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q 288 (527)
T TIGR03075 210 ADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDP-ETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQ 288 (527)
T ss_pred cccccccccccCCCCCCccccCCCCccCceeEcC-CCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeee
Confidence 00 00011112457777 44455555522 2 56777888998877665
Q ss_pred cccCCe---------EEEEECCCCc---EEEEeeccCCeEEEEecccceee
Q 022019 263 GQEGGV---------THVQFSRDGN---YLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 263 ~~~~~v---------~~~~~~~~~~---~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
.....+ .-+....+|+ .++.+. ++|.+.+.|-++|+.+
T Consensus 289 ~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~-K~G~~~vlDr~tG~~i 338 (527)
T TIGR03075 289 TTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHAD-RNGFFYVLDRTNGKLL 338 (527)
T ss_pred CCCCCCccccCCCCcEEEEeccCCcEEEEEEEeC-CCceEEEEECCCCcee
Confidence 322211 1222334676 677788 9999999999999875
No 389
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=97.04 E-value=0.1 Score=40.65 Aligned_cols=153 Identities=16% Similarity=0.178 Sum_probs=84.1
Q ss_pred ceeEEEEcCCCCeEEEec---CCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 62 FLKGIKWSPDGSSFLTSS---EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~---~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
.+...+++++|+.+|... ....+.++....... ... .+..+....| ++++
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~------------------~~~--~g~~l~~PS~-------d~~g 77 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVR------------------PVL--TGGSLTRPSW-------DPDG 77 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcce------------------eec--cCCccccccc-------cCCC
Confidence 588999999999776554 233455554332110 000 2234444444 6677
Q ss_pred cEEEEEeCCCCEEEEE-cCCCeeeE-EeecccccccccceEEEEECCCCcEEE-EE---cCCeEEEEEcCCCCcc-ceee
Q 022019 139 CVFASTTRDHPIHLWD-ATTGLLRC-TYRAYDAVDEITAAFSVAFNPTGTKIF-AG---YNKSVRVFDVHRPGRD-FEKY 211 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d-~~~~~~~~-~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~---~d~~i~v~d~~~~~~~-~~~~ 211 (304)
...+....+...+++. ..++.... ....... . ..|..+.++|||..++ .. .++.|.+--+...... ...+
T Consensus 78 ~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~-~--~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l 154 (253)
T PF10647_consen 78 WVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGL-R--GRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRL 154 (253)
T ss_pred CEEEEEcCCCceEEEEecCCCcceeEEeccccc-C--CceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCccee
Confidence 6666666666666663 33333221 1222111 0 1789999999999988 32 4678888776543332 1122
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEEEecCC
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ 245 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg 245 (304)
.............++.++|.+ +..+++.+...+
T Consensus 155 ~~~~~~~~~~~~~v~~v~W~~-~~~L~V~~~~~~ 187 (253)
T PF10647_consen 155 TGPRRVAPPLLSDVTDVAWSD-DSTLVVLGRSAG 187 (253)
T ss_pred ccceEecccccCcceeeeecC-CCEEEEEeCCCC
Confidence 222222223345689999999 555555554433
No 390
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=96.95 E-value=0.084 Score=46.16 Aligned_cols=110 Identities=5% Similarity=0.121 Sum_probs=68.0
Q ss_pred ceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEee--cCCCcEEEEEecCCeEEEEe
Q 022019 175 AAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFS--PTHTGMLAIGSYSQTSAIYR 251 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--p~~~~~l~~~~~dg~i~i~d 251 (304)
.+.-+.-+.-++..++. ....+.|||.+...- ..... ....+.|.++.|. | ++..+++.+..+.|.+|.
T Consensus 31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~l------E~~~~-f~~~~~I~dLDWtst~-d~qsiLaVGf~~~v~l~~ 102 (631)
T PF12234_consen 31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVL------EYEES-FSEDDPIRDLDWTSTP-DGQSILAVGFPHHVLLYT 102 (631)
T ss_pred CcceEeecccCcEEEEECCCCEEEEEEcCCcEE------EEeee-ecCCCceeeceeeecC-CCCEEEEEEcCcEEEEEE
Confidence 33445555555555565 667899999986421 11111 1345678999986 5 455666667778888884
Q ss_pred cC---------CceEeEEe--cccc-CCeEEEEECCCCcEEEEeeccCCeEEEEec
Q 022019 252 ED---------NMELLYVL--HGQE-GGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 252 ~~---------~~~~~~~~--~~~~-~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
-. +..++..+ ..|+ .+|.+..|.++|..++.+ ++.+.|++-
T Consensus 103 Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s---GNqlfv~dk 155 (631)
T PF12234_consen 103 QLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS---GNQLFVFDK 155 (631)
T ss_pred ccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe---CCEEEEECC
Confidence 31 22344443 2344 579999999999766544 456888764
No 391
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=96.91 E-value=0.29 Score=44.02 Aligned_cols=94 Identities=15% Similarity=0.183 Sum_probs=57.9
Q ss_pred CCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcccc------ccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDV------NACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
...-.|..|.++|+|++||..|..|.+.+.=.+.......+ ..+....- ....+.......|..+.|+|.
T Consensus 82 ~~~f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v---~~~~~~~~~~~~i~qv~WhP~- 157 (717)
T PF10168_consen 82 PPLFEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPV---DERFFTSNSSLEIKQVRWHPW- 157 (717)
T ss_pred CCceeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEe---chhhccCCCCceEEEEEEcCC-
Confidence 34457999999999999999988765444322211110000 00000000 000011233457899999997
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEcCCC
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDATTG 158 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~~~~ 158 (304)
++++.+|++-..|+++++||+...
T Consensus 158 ---s~~~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 158 ---SESDSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred ---CCCCCeEEEEecCCEEEEEecCCC
Confidence 667788999999999999999754
No 392
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.84 E-value=0.0052 Score=32.39 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=26.5
Q ss_pred ceeEEEeecCCC--cEEEEEecCCeEEEEecCC
Q 022019 224 IMSAIAFSPTHT--GMLAIGSYSQTSAIYREDN 254 (304)
Q Consensus 224 ~v~~~~~~p~~~--~~l~~~~~dg~i~i~d~~~ 254 (304)
.+.++.|+|..+ .+|+.+-.-|.|.|+|+++
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 588999998555 6888888889999999985
No 393
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.83 E-value=0.031 Score=51.05 Aligned_cols=140 Identities=14% Similarity=0.117 Sum_probs=82.7
Q ss_pred CCCccEEEE--EeCCCCEEEEEcCCCeeeE-----Eeeccc-ccccccceEEEEECCCCc--EEEEEcCCeEEEEEcCCC
Q 022019 135 DPTSCVFAS--TTRDHPIHLWDATTGLLRC-----TYRAYD-AVDEITAAFSVAFNPTGT--KIFAGYNKSVRVFDVHRP 204 (304)
Q Consensus 135 ~~~~~~l~~--~~~dg~i~i~d~~~~~~~~-----~~~~~~-~~~~~~~v~~i~~~~~~~--~l~~~~d~~i~v~d~~~~ 204 (304)
.+|+...++ .+.+-.|..||+++-.... -+..+. .........++.|+|.-. .+++..|+.|++..+...
T Consensus 109 ~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~ 188 (1405)
T KOG3630|consen 109 FHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQL 188 (1405)
T ss_pred ccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhh
Confidence 445444333 3444478999997532211 111111 011222456889998643 333448999999887642
Q ss_pred CccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccc----cCCeEEEEECCCCcEE
Q 022019 205 GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ----EGGVTHVQFSRDGNYL 280 (304)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l 280 (304)
...... .......++++|+| .+..+++|-.+|++.-|-.. .+....+.+. ...|.++.|-....++
T Consensus 189 ~~~v~s--------~p~t~~~Tav~WSp-rGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~~e~yrvl~v~Wl~t~efl 258 (1405)
T KOG3630|consen 189 AQNVTS--------FPVTNSQTAVLWSP-RGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPVEENYRVLSVTWLSTQEFL 258 (1405)
T ss_pred hhhhcc--------cCcccceeeEEecc-ccceeeEecCCCeEEEeecc-cceeecccCCCcCCCcceeEEEEecceeEE
Confidence 211111 12344589999999 88899999999999888753 3333333221 3579999998776666
Q ss_pred EEee
Q 022019 281 YTGG 284 (304)
Q Consensus 281 ~~~~ 284 (304)
++-+
T Consensus 259 vvy~ 262 (1405)
T KOG3630|consen 259 VVYG 262 (1405)
T ss_pred EEec
Confidence 6544
No 394
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.80 E-value=0.013 Score=53.22 Aligned_cols=120 Identities=12% Similarity=0.076 Sum_probs=79.2
Q ss_pred ceEEEEECCCCcEEEE---EcCCeEEEEEcCCCCcccee-eeeeeccc--cccccceeEEEeecCCCcEEEEEecCCeEE
Q 022019 175 AAFSVAFNPTGTKIFA---GYNKSVRVFDVHRPGRDFEK-YSTLKGNK--EGQAGIMSAIAFSPTHTGMLAIGSYSQTSA 248 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~---~~d~~i~v~d~~~~~~~~~~-~~~~~~~~--~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~ 248 (304)
.+..+...+|+...++ ..+-.|..||++.-...... ...+.... ........++.|+|.-....+++..|+.|+
T Consensus 102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~ 181 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR 181 (1405)
T ss_pred cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence 5667777888777663 25457999999864322111 11111111 112233567889996666778888999999
Q ss_pred EEecCCceE-eEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 249 IYREDNMEL-LYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 249 i~d~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
+..+..... +..+. -....++++|+|.|+.++.|- ..|++.=|...
T Consensus 182 V~~~~~~~~~v~s~p-~t~~~Tav~WSprGKQl~iG~-nnGt~vQy~P~ 228 (1405)
T KOG3630|consen 182 VKSTKQLAQNVTSFP-VTNSQTAVLWSPRGKQLFIGR-NNGTEVQYEPS 228 (1405)
T ss_pred hhhhhhhhhhhcccC-cccceeeEEeccccceeeEec-CCCeEEEeecc
Confidence 998764432 22333 345789999999999999998 89998877653
No 395
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=96.75 E-value=0.0029 Score=55.90 Aligned_cols=146 Identities=12% Similarity=0.094 Sum_probs=85.3
Q ss_pred CCCEEEEEcC--CCeeeEEeecccccccccceEEEEECC---CCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccc
Q 022019 147 DHPIHLWDAT--TGLLRCTYRAYDAVDEITAAFSVAFNP---TGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEG 220 (304)
Q Consensus 147 dg~i~i~d~~--~~~~~~~~~~~~~~~~~~~v~~i~~~~---~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~ 220 (304)
-|.+.+||+. .|+....+..+........+.-+.|.| +..++..+ .++.|++..+..... ..+.+
T Consensus 152 vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~---------~l~rs 222 (1283)
T KOG1916|consen 152 VGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR---------SLFRS 222 (1283)
T ss_pred hhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHHH---------HHHHh
Confidence 3678899876 455444443332222223445666665 45566677 888999888765321 01122
Q ss_pred cccceeE-----------EEeecCCCcEEEEEecCCeEEEEec-----CCceEeEEeccccC-CeEEEEECCC-------
Q 022019 221 QAGIMSA-----------IAFSPTHTGMLAIGSYSQTSAIYRE-----DNMELLYVLHGQEG-GVTHVQFSRD------- 276 (304)
Q Consensus 221 ~~~~v~~-----------~~~~p~~~~~l~~~~~dg~i~i~d~-----~~~~~~~~~~~~~~-~v~~~~~~~~------- 276 (304)
|...+.. -..+| +|..++.++.||.+++|.+ ....++...+.|.+ +-.|.-++.+
T Consensus 223 Hs~~~~d~a~~~~g~~~l~~lSp-DGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i 301 (1283)
T KOG1916|consen 223 HSQRVTDMAFFAEGVLKLASLSP-DGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSI 301 (1283)
T ss_pred cCCCcccHHHHhhchhhheeeCC-CCcEEEEeecCCccceeeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCcc
Confidence 3333222 23688 7889999999999887765 33456667777763 3222223322
Q ss_pred C--cEEEEeeccCCeEEEEecccceeee
Q 022019 277 G--NYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 277 ~--~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
+ .++++++..+..+++|....-+|++
T Consensus 302 ~~w~~~Itttd~nre~k~w~~a~w~Cll 329 (1283)
T KOG1916|consen 302 GKWVLRITTTDVNREEKFWAEAPWQCLL 329 (1283)
T ss_pred ceeEEEEecccCCcceeEeeccchhhhh
Confidence 1 3456666456679999887666654
No 396
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=96.70 E-value=0.13 Score=41.93 Aligned_cols=108 Identities=19% Similarity=0.160 Sum_probs=60.1
Q ss_pred ceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecC---CCcEEEEEecC-------
Q 022019 175 AAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPT---HTGMLAIGSYS------- 244 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~~~~~d------- 244 (304)
..++|+|.|+|+++++-..|.|++++... .....+................++++|+ ++.++++.+..
T Consensus 3 ~P~~~a~~pdG~l~v~e~~G~i~~~~~~g--~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~ 80 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVAERSGRIWVVDKDG--SLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDN 80 (331)
T ss_dssp SEEEEEEETTSCEEEEETTTEEEEEETTT--EECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSE
T ss_pred CceEEEEeCCCcEEEEeCCceEEEEeCCC--cCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCc
Confidence 45789999999988887999999999322 2111122222223344556889999993 35555555432
Q ss_pred -CeEEEEecCCc-------eEe-EEecc---ccCCeEEEEECCCCcEEEEee
Q 022019 245 -QTSAIYREDNM-------ELL-YVLHG---QEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 245 -g~i~i~d~~~~-------~~~-~~~~~---~~~~v~~~~~~~~~~~l~~~~ 284 (304)
..|.-|..... +.+ ..+.. ....-..|.|.|||.+.++.+
T Consensus 81 ~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G 132 (331)
T PF07995_consen 81 DNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVG 132 (331)
T ss_dssp EEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB
T ss_pred ceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeC
Confidence 23333433222 111 12222 234567799999997766666
No 397
>PHA03098 kelch-like protein; Provisional
Probab=96.65 E-value=0.31 Score=42.73 Aligned_cols=146 Identities=15% Similarity=0.143 Sum_probs=70.8
Q ss_pred CccEEEEEeCC-----CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-Ec-C-----CeEEEEEcCCC
Q 022019 137 TSCVFASTTRD-----HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GY-N-----KSVRVFDVHRP 204 (304)
Q Consensus 137 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~-d-----~~i~v~d~~~~ 204 (304)
++.+++.|+.+ ..+..||..+++....-..+.. . .-.+++. -+++..+. |. . ..+..||..+.
T Consensus 342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~-r---~~~~~~~-~~~~iYv~GG~~~~~~~~~~v~~yd~~t~ 416 (534)
T PHA03098 342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFP-R---YNPCVVN-VNNLIYVIGGISKNDELLKTVECFSLNTN 416 (534)
T ss_pred CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcC-C---ccceEEE-ECCEEEEECCcCCCCcccceEEEEeCCCC
Confidence 56677777765 3477888877654322111111 0 1112222 23555553 42 1 45788888652
Q ss_pred CccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCC--------eEEEEecCCce--EeEEeccccCCeEEEEEC
Q 022019 205 GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ--------TSAIYREDNME--LLYVLHGQEGGVTHVQFS 274 (304)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg--------~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~ 274 (304)
.+.....+. .+... . +++.. ++.+++.|+.++ .+.+||..+.+ .+..+.........+.+
T Consensus 417 --~W~~~~~~p---~~r~~-~-~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~- 486 (534)
T PHA03098 417 --KWSKGSPLP---ISHYG-G-CAIYH--DGKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIF- 486 (534)
T ss_pred --eeeecCCCC---ccccC-c-eEEEE--CCEEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEEE-
Confidence 222111111 11111 1 22222 456777776532 38889987654 22222211112222333
Q ss_pred CCCcEEEEeeccC-----CeEEEEecccce
Q 022019 275 RDGNYLYTGGRKD-----PYILCWDLRKAV 299 (304)
Q Consensus 275 ~~~~~l~~~~~~d-----~~i~vwd~~~~~ 299 (304)
+++.++.|| .+ +.+.+||..+.+
T Consensus 487 -~~~iyv~GG-~~~~~~~~~v~~yd~~~~~ 514 (534)
T PHA03098 487 -NNKIYVVGG-DKYEYYINEIEVYDDKTNT 514 (534)
T ss_pred -CCEEEEEcC-CcCCcccceeEEEeCCCCE
Confidence 567777776 43 478889887764
No 398
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.62 E-value=0.062 Score=41.46 Aligned_cols=103 Identities=17% Similarity=0.167 Sum_probs=66.1
Q ss_pred ceEEEEECCCCcEEE-EE-c-CCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEec-----CCe
Q 022019 175 AAFSVAFNPTGTKIF-AG-Y-NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY-----SQT 246 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~-~~-~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~-----dg~ 246 (304)
....|+|+|.-..-+ .. . .-...+||.................+.+ .=.||| ++.+|...-. -|.
T Consensus 69 R~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyG------HGvfs~-dG~~LYATEndfd~~rGV 141 (366)
T COG3490 69 RGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYG------HGVFSP-DGRLLYATENDFDPNRGV 141 (366)
T ss_pred ccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeec------ccccCC-CCcEEEeecCCCCCCCce
Confidence 344788988654433 34 3 3456789987643322222211122222 347999 5555554433 267
Q ss_pred EEEEecCCc-eEeEEeccccCCeEEEEECCCCcEEEEee
Q 022019 247 SAIYREDNM-ELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 247 i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
|-|||.+.+ ..+.++..|.-.-..+.|.+||+.|+.++
T Consensus 142 iGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan 180 (366)
T COG3490 142 IGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred EEEEecccccceecccccCCcCcceeEEecCCcEEEEeC
Confidence 999999854 46788888888889999999999988775
No 399
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=96.62 E-value=0.34 Score=40.71 Aligned_cols=54 Identities=19% Similarity=0.198 Sum_probs=38.8
Q ss_pred ccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccc-cCCeEEEEECCC
Q 022019 222 AGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ-EGGVTHVQFSRD 276 (304)
Q Consensus 222 ~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~~ 276 (304)
.+++..|+.|| +++++|.-..+|.+.+.+.+-.+....+... ......+.|.-+
T Consensus 216 ~~~i~~iavSp-ng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~ 270 (410)
T PF04841_consen 216 DGPIIKIAVSP-NGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGN 270 (410)
T ss_pred CCCeEEEEECC-CCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECC
Confidence 35699999999 7778888889999999887666666666533 234456666543
No 400
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=96.61 E-value=0.34 Score=40.51 Aligned_cols=151 Identities=7% Similarity=0.062 Sum_probs=86.3
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeee--EEeecccccccccceEEEEECC-----CCcEEEEEcCCeEEEEEcCCCCcc--
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLR--CTYRAYDAVDEITAAFSVAFNP-----TGTKIFAGYNKSVRVFDVHRPGRD-- 207 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~~~~~v~~i~~~~-----~~~~l~~~~d~~i~v~d~~~~~~~-- 207 (304)
+...+++|+..|.++||+...+... ..+-... -..+|..+..-+ +...||+=.-..+.||.+......
T Consensus 36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~---l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~ 112 (418)
T PF14727_consen 36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQ---LKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVE 112 (418)
T ss_pred CccEEEEeccccEEEEEccCCCCCCCccEEEEEe---cCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcc
Confidence 4568999999999999998653311 1111100 112666665532 334565667888999988543221
Q ss_pred ----ceeeeeeeccccccccceeEEEeecC----CCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcE
Q 022019 208 ----FEKYSTLKGNKEGQAGIMSAIAFSPT----HTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNY 279 (304)
Q Consensus 208 ----~~~~~~~~~~~~~~~~~v~~~~~~p~----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 279 (304)
..........+ ......++.-|- +..+|++-+.||.+.+|+-+...-...+.. .--...+.|.+.-..
T Consensus 113 ~g~~~~L~~~yeh~l---~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDs 188 (418)
T PF14727_consen 113 HGNQYQLELIYEHSL---QRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDS 188 (418)
T ss_pred cCcEEEEEEEEEEec---ccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCE
Confidence 11111111111 112334444332 246899999999999999765543334432 111234677777777
Q ss_pred EEEeeccCCeEEEEec
Q 022019 280 LYTGGRKDPYILCWDL 295 (304)
Q Consensus 280 l~~~~~~d~~i~vwd~ 295 (304)
+++++ .+..|.-|..
T Consensus 189 fvt~s-ss~~l~~Yky 203 (418)
T PF14727_consen 189 FVTAS-SSWTLECYKY 203 (418)
T ss_pred EEEec-CceeEEEecH
Confidence 88887 7777777765
No 401
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.60 E-value=0.2 Score=37.66 Aligned_cols=98 Identities=12% Similarity=0.147 Sum_probs=63.6
Q ss_pred eEEEEECCCCcEEE-E-EcCCeEEEEEcCCCCccc---eeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEE
Q 022019 176 AFSVAFNPTGTKIF-A-GYNKSVRVFDVHRPGRDF---EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY 250 (304)
Q Consensus 176 v~~i~~~~~~~~l~-~-~~d~~i~v~d~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~ 250 (304)
-+.++|+.+.+.++ . +.+-.|.-||........ +.+..+........-..-.++... .+.++++.-..++|.-+
T Consensus 160 sNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~-eG~L~Va~~ng~~V~~~ 238 (310)
T KOG4499|consen 160 SNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDT-EGNLYVATFNGGTVQKV 238 (310)
T ss_pred CccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEcc-CCcEEEEEecCcEEEEE
Confidence 35799998888777 3 377778778844322111 111112111110111123455555 66677777778899999
Q ss_pred ecCCceEeEEeccccCCeEEEEEC
Q 022019 251 REDNMELLYVLHGQEGGVTHVQFS 274 (304)
Q Consensus 251 d~~~~~~~~~~~~~~~~v~~~~~~ 274 (304)
|..+++.+.++.-....|++++|-
T Consensus 239 dp~tGK~L~eiklPt~qitsccFg 262 (310)
T KOG4499|consen 239 DPTTGKILLEIKLPTPQITSCCFG 262 (310)
T ss_pred CCCCCcEEEEEEcCCCceEEEEec
Confidence 999999999999888899999995
No 402
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.59 E-value=0.2 Score=45.90 Aligned_cols=105 Identities=10% Similarity=0.102 Sum_probs=71.1
Q ss_pred CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCE
Q 022019 71 DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPI 150 (304)
Q Consensus 71 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i 150 (304)
.+..++.|+..|.+-..|+..+-.. . ........+|.+++| +.+|..++.|-.+|.|
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~-------~---------~~ne~v~~~Vtsvaf-------n~dg~~l~~G~~~G~V 154 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGP-------L---------HQNERVQGPVTSVAF-------NQDGSLLLAGLGDGHV 154 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccch-------h---------hcCCccCCcceeeEe-------cCCCceeccccCCCcE
Confidence 4567888888888888887643110 0 011122367888877 7899999999999999
Q ss_pred EEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcC
Q 022019 151 HLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVH 202 (304)
Q Consensus 151 ~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~ 202 (304)
.+||+..++..+.+..+... + ..|..+.+..++..++++ ..|. +|.+.
T Consensus 155 ~v~D~~~~k~l~~i~e~~ap-~-t~vi~v~~t~~nS~llt~D~~Gs--f~~lv 203 (1206)
T KOG2079|consen 155 TVWDMHRAKILKVITEHGAP-V-TGVIFVGRTSQNSKLLTSDTGGS--FWKLV 203 (1206)
T ss_pred EEEEccCCcceeeeeecCCc-c-ceEEEEEEeCCCcEEEEccCCCc--eEEEE
Confidence 99999999888888776642 1 244555555666656666 4454 55553
No 403
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=96.56 E-value=0.25 Score=38.45 Aligned_cols=146 Identities=15% Similarity=0.085 Sum_probs=79.4
Q ss_pred ceeCCCccEEEEEe--C-CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEE-cCCCCc
Q 022019 132 SASDPTSCVFASTT--R-DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFD-VHRPGR 206 (304)
Q Consensus 132 ~~~~~~~~~l~~~~--~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d-~~~~~~ 206 (304)
.++++++..++... . ...++++. .+........ .. .+....|++++...++. .+...+++. ...+..
T Consensus 29 ~AvS~dg~~~A~v~~~~~~~~L~~~~--~~~~~~~~~~-g~-----~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~ 100 (253)
T PF10647_consen 29 PAVSPDGSRVAAVSEGDGGRSLYVGP--AGGPVRPVLT-GG-----SLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTG 100 (253)
T ss_pred eEECCCCCeEEEEEEcCCCCEEEEEc--CCCcceeecc-CC-----ccccccccCCCCEEEEEcCCCceEEEEecCCCcc
Confidence 35588888777665 2 23444544 3332222211 11 56778999998877765 555556653 222111
Q ss_pred cceeeeeeeccccccccceeEEEeecCCCcEEEEEe--cCCeEEEEecC---Cc------eEeEEeccccCCeEEEEECC
Q 022019 207 DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS--YSQTSAIYRED---NM------ELLYVLHGQEGGVTHVQFSR 275 (304)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~--~dg~i~i~d~~---~~------~~~~~~~~~~~~v~~~~~~~ 275 (304)
... .... ......|.++.++|++.++.++.. .++.|.+--+. .+ .+..........++++.|.+
T Consensus 101 ~~~---~v~~--~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~ 175 (253)
T PF10647_consen 101 EPV---EVDW--PGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSD 175 (253)
T ss_pred eeE---Eecc--cccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecC
Confidence 111 1110 111117999999996555555442 24666666432 22 11222223345789999999
Q ss_pred CCcEEEEeeccCCeE
Q 022019 276 DGNYLYTGGRKDPYI 290 (304)
Q Consensus 276 ~~~~l~~~~~~d~~i 290 (304)
++.+++.+...++.+
T Consensus 176 ~~~L~V~~~~~~~~~ 190 (253)
T PF10647_consen 176 DSTLVVLGRSAGGPV 190 (253)
T ss_pred CCEEEEEeCCCCCce
Confidence 998877776344433
No 404
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=96.54 E-value=0.29 Score=38.96 Aligned_cols=159 Identities=14% Similarity=0.134 Sum_probs=76.8
Q ss_pred cCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCC
Q 022019 57 SIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP 136 (304)
Q Consensus 57 ~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 136 (304)
.+-.+.+..+.-++||++++++..-....-||.-.... ..........+..+.| +|
T Consensus 141 ~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w-----------------~~~~r~~~~riq~~gf-------~~ 196 (302)
T PF14870_consen 141 SETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTW-----------------QPHNRNSSRRIQSMGF-------SP 196 (302)
T ss_dssp -S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS------------------EEEE--SSS-EEEEEE--------T
T ss_pred cCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccc-----------------eEEccCccceehhcee-------cC
Confidence 34457788888899999998887666666776542111 1122223367888877 66
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeeeEEeec--ccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeee
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRA--YDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~ 214 (304)
++.+.+.+ ..|.|++=+.... ...+.. .........+..++|.+++...++|..|.+.+ .. ..++..+.....
T Consensus 197 ~~~lw~~~-~Gg~~~~s~~~~~--~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G~l~~-S~-DgGktW~~~~~~ 271 (302)
T PF14870_consen 197 DGNLWMLA-RGGQIQFSDDPDD--GETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSGTLLV-ST-DGGKTWQKDRVG 271 (302)
T ss_dssp TS-EEEEE-TTTEEEEEE-TTE--EEEE---B-TTSS--S-EEEEEESSSS-EEEEESTT-EEE-ES-STTSS-EE-GGG
T ss_pred CCCEEEEe-CCcEEEEccCCCC--ccccccccCCcccCceeeEEEEecCCCCEEEEeCCccEEE-eC-CCCccceECccc
Confidence 77766644 7888887772211 112211 11101112578999999998888888885544 22 233333322111
Q ss_pred eccccccccceeEEEeecCCCcEEEEEecCCeEEEE
Q 022019 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY 250 (304)
Q Consensus 215 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~ 250 (304)
......++.+.|.+ ..+-++ -+.+|.|.-|
T Consensus 272 ----~~~~~n~~~i~f~~-~~~gf~-lG~~G~ll~~ 301 (302)
T PF14870_consen 272 ----ENVPSNLYRIVFVN-PDKGFV-LGQDGVLLRY 301 (302)
T ss_dssp ----TTSSS---EEEEEE-TTEEEE-E-STTEEEEE
T ss_pred ----cCCCCceEEEEEcC-CCceEE-ECCCcEEEEe
Confidence 22334478888876 443444 4567876544
No 405
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=96.53 E-value=0.36 Score=42.93 Aligned_cols=111 Identities=12% Similarity=0.085 Sum_probs=68.7
Q ss_pred CccEEEEEeCCCCEEEEEcCC-------C----ee---eEEeecccccccccceEEEEEC--CCCcEEEEE-cCCeEEEE
Q 022019 137 TSCVFASTTRDHPIHLWDATT-------G----LL---RCTYRAYDAVDEITAAFSVAFN--PTGTKIFAG-YNKSVRVF 199 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~-------~----~~---~~~~~~~~~~~~~~~v~~i~~~--~~~~~l~~~-~d~~i~v~ 199 (304)
+...|+.|.+||.|.+|.+++ . .. .......-.......+++++++ ...++||+| ....|.||
T Consensus 113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVF 192 (717)
T PF08728_consen 113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVF 192 (717)
T ss_pred CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEecCCceEEEE
Confidence 456799999999999997632 1 00 0000000111122378999998 788899977 77788888
Q ss_pred EcCCCCccceeeeeeeccccccccceeEEEeecCC----Cc-EEEEEecCCeEEEEec
Q 022019 200 DVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTH----TG-MLAIGSYSQTSAIYRE 252 (304)
Q Consensus 200 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~----~~-~l~~~~~dg~i~i~d~ 252 (304)
-+........... ...+..-|.+|+|-++. +. .+++++-.|.+.+|++
T Consensus 193 af~l~~~r~~~~~-----s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 193 AFALVDERFYHVP-----SHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EEecccccccccc-----ccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 7654211111100 11244458899998743 22 6777888999999887
No 406
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=96.46 E-value=0.17 Score=44.38 Aligned_cols=120 Identities=16% Similarity=0.129 Sum_probs=75.4
Q ss_pred CCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
-....-+.-|.-++..++-+....+.|||...+...++ ..+.....|.++.|. ..|+++
T Consensus 29 i~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~----------------~~f~~~~~I~dLDWt-----st~d~q 87 (631)
T PF12234_consen 29 ISNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYE----------------ESFSEDDPIRDLDWT-----STPDGQ 87 (631)
T ss_pred CCCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEe----------------eeecCCCceeeceee-----ecCCCC
Confidence 33445555555454444444456899999986643222 222445789999994 478999
Q ss_pred EEEEEeCCCCEEEEEcC-----C----CeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCC
Q 022019 140 VFASTTRDHPIHLWDAT-----T----GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHR 203 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~-----~----~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~ 203 (304)
.+++.+..+.|.+|.-. . -..+..+....... .+|.+..|-++|.+++ |.++.+.|+|-..
T Consensus 88 siLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~--h~Igds~Wl~~G~LvV-~sGNqlfv~dk~~ 157 (631)
T PF12234_consen 88 SILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTP--HPIGDSIWLKDGTLVV-GSGNQLFVFDKWL 157 (631)
T ss_pred EEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecCCC--CCccceeEecCCeEEE-EeCCEEEEECCCc
Confidence 99999999999998532 1 11223333222211 2788899999886665 4467788887543
No 407
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=96.38 E-value=0.39 Score=42.23 Aligned_cols=146 Identities=15% Similarity=0.253 Sum_probs=75.7
Q ss_pred CccEEEEEeCCCC-----EEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcC------CeEEEEEcCCC
Q 022019 137 TSCVFASTTRDHP-----IHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYN------KSVRVFDVHRP 204 (304)
Q Consensus 137 ~~~~l~~~~~dg~-----i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d------~~i~v~d~~~~ 204 (304)
+|.+.|+|+.||. +-.||..+.+....-..... . ..+-...+ +|...++ |.+ ..+..||..+.
T Consensus 380 ~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~-r--~~~gv~~~--~g~iYi~GG~~~~~~~l~sve~YDP~t~ 454 (571)
T KOG4441|consen 380 DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTR-R--SGHGVAVL--GGKLYIIGGGDGSSNCLNSVECYDPETN 454 (571)
T ss_pred CCEEEEEeccccccccccEEEecCCCCcccccCCCCcc-e--eeeEEEEE--CCEEEEEcCcCCCccccceEEEEcCCCC
Confidence 7778999998864 66777766543222111110 0 01112222 3555554 333 35778888762
Q ss_pred CccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCe-----EEEEecCCce--EeEEeccccCCeEEEEECCCC
Q 022019 205 GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQT-----SAIYREDNME--LLYVLHGQEGGVTHVQFSRDG 277 (304)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~-----i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~ 277 (304)
.+.....+.....++ .++.- ++.++++|+.|+. |..||..+.+ .+..+......+..+.+ ++
T Consensus 455 --~W~~~~~M~~~R~~~-----g~a~~--~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~--~~ 523 (571)
T KOG4441|consen 455 --TWTLIAPMNTRRSGF-----GVAVL--NGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVL--GG 523 (571)
T ss_pred --ceeecCCcccccccc-----eEEEE--CCEEEEECCccCCCccceEEEEcCCCCceeEcccCccccccccEEEE--CC
Confidence 222222222222221 13332 5678899988873 7788887654 33333333333333333 45
Q ss_pred cEEEEeeccCC-----eEEEEecccce
Q 022019 278 NYLYTGGRKDP-----YILCWDLRKAV 299 (304)
Q Consensus 278 ~~l~~~~~~d~-----~i~vwd~~~~~ 299 (304)
...+.|| .|| +|..||..+.+
T Consensus 524 ~ly~vGG-~~~~~~l~~ve~ydp~~d~ 549 (571)
T KOG4441|consen 524 KLYAVGG-FDGNNNLNTVECYDPETDT 549 (571)
T ss_pred EEEEEec-ccCccccceeEEcCCCCCc
Confidence 5666666 665 46777766543
No 408
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.37 E-value=0.26 Score=36.37 Aligned_cols=177 Identities=10% Similarity=0.158 Sum_probs=94.7
Q ss_pred CCCeEEEecC--CCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCC
Q 022019 71 DGSSFLTSSE--DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDH 148 (304)
Q Consensus 71 ~~~~l~s~~~--dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg 148 (304)
+|.++.+.+. ...|++||+.+++......... +...-.-...-+..++.+.| .+|
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~-----~~~FgEGit~~gd~~y~LTw------------------~eg 111 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAP-----DTVFGEGITKLGDYFYQLTW------------------KEG 111 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecCC-----ccccccceeeccceEEEEEe------------------ccc
Confidence 5566776654 3469999999776543322210 00000001112234444444 678
Q ss_pred CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccc-ccccee
Q 022019 149 PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEG-QAGIMS 226 (304)
Q Consensus 149 ~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~-~~~~v~ 226 (304)
.-..+|.++-+....+...+ .-+.+. .|+..|..+ ...+++.-|..+-. ....+.-...+ .-..+.
T Consensus 112 vaf~~d~~t~~~lg~~~y~G------eGWgLt--~d~~~LimsdGsatL~frdP~tfa----~~~~v~VT~~g~pv~~LN 179 (262)
T COG3823 112 VAFKYDADTLEELGRFSYEG------EGWGLT--SDDKNLIMSDGSATLQFRDPKTFA----ELDTVQVTDDGVPVSKLN 179 (262)
T ss_pred eeEEEChHHhhhhcccccCC------cceeee--cCCcceEeeCCceEEEecCHHHhh----hcceEEEEECCeeccccc
Confidence 88899988877766665544 334444 455556644 66667666654421 11111111111 111234
Q ss_pred EEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec------------cccCCeEEEEECCCCcEEEEee
Q 022019 227 AIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH------------GQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 227 ~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~------------~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
.+.|- ++.++|-.=.+..|...|..+++.+..+. .+..-.+.+++.|++..++..|
T Consensus 180 ELE~V--dG~lyANVw~t~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG 247 (262)
T COG3823 180 ELEWV--DGELYANVWQTTRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG 247 (262)
T ss_pred ceeee--ccEEEEeeeeecceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence 45554 35566655566667777777776655443 2344678899999885555444
No 409
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=96.28 E-value=0.52 Score=39.14 Aligned_cols=136 Identities=22% Similarity=0.275 Sum_probs=66.4
Q ss_pred CCCCEEEEEcCCCeeeEEeecccccccccceEEEEE--CCCCcEEE--EEcCCeEEEEEcCCCCc-cceeeeeeec----
Q 022019 146 RDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAF--NPTGTKIF--AGYNKSVRVFDVHRPGR-DFEKYSTLKG---- 216 (304)
Q Consensus 146 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~--~~~~~~l~--~~~d~~i~v~d~~~~~~-~~~~~~~~~~---- 216 (304)
...++.+||+.+.+.++++....... .+..+.| +|+..+-+ +.-..+|..|--...+. ..+....+..
T Consensus 220 yG~~l~vWD~~~r~~~Q~idLg~~g~---~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~ 296 (461)
T PF05694_consen 220 YGHSLHVWDWSTRKLLQTIDLGEEGQ---MPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVE 296 (461)
T ss_dssp S--EEEEEETTTTEEEEEEES-TTEE---EEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--
T ss_pred ccCeEEEEECCCCcEeeEEecCCCCC---ceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccC
Confidence 45689999999999999988754311 3445666 44454444 33566666554422211 1111111110
Q ss_pred ---------cccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc---eEeEEec-c---------------ccCCe
Q 022019 217 ---------NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM---ELLYVLH-G---------------QEGGV 268 (304)
Q Consensus 217 ---------~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~-~---------------~~~~v 268 (304)
.+..-..-|+.+..|.|+..+++++-.+|.|+.||+... +++..+. + -.+..
T Consensus 297 ~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgP 376 (461)
T PF05694_consen 297 GWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGP 376 (461)
T ss_dssp SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S--
T ss_pred cccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCC
Confidence 001113458899999977777777778999999999753 3333322 1 01234
Q ss_pred EEEEECCCCcEEEEee
Q 022019 269 THVQFSRDGNYLYTGG 284 (304)
Q Consensus 269 ~~~~~~~~~~~l~~~~ 284 (304)
.-+..|-||+.|+...
T Consensus 377 qMvqlS~DGkRlYvTn 392 (461)
T PF05694_consen 377 QMVQLSLDGKRLYVTN 392 (461)
T ss_dssp --EEE-TTSSEEEEE-
T ss_pred CeEEEccCCeEEEEEe
Confidence 6688899999998775
No 410
>PRK13684 Ycf48-like protein; Provisional
Probab=96.23 E-value=0.52 Score=38.48 Aligned_cols=113 Identities=13% Similarity=0.068 Sum_probs=65.9
Q ss_pred ceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC
Q 022019 175 AAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN 254 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~ 254 (304)
.++++.+.++++.++++..|.+.+=... .+..+..... ........+.++.+.| .+.+++ ++.+|.+.. ....
T Consensus 216 ~l~~i~~~~~g~~~~vg~~G~~~~~s~d-~G~sW~~~~~---~~~~~~~~l~~v~~~~-~~~~~~-~G~~G~v~~-S~d~ 288 (334)
T PRK13684 216 RLQSMGFQPDGNLWMLARGGQIRFNDPD-DLESWSKPII---PEITNGYGYLDLAYRT-PGEIWA-GGGNGTLLV-SKDG 288 (334)
T ss_pred cceeeeEcCCCCEEEEecCCEEEEccCC-CCCccccccC---CccccccceeeEEEcC-CCCEEE-EcCCCeEEE-eCCC
Confidence 7889999999998888888876532222 2222221111 0011123477889998 555554 455676553 3344
Q ss_pred ceEeEEec---cccCCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 255 MELLYVLH---GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 255 ~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
++.-.... .-....+.+.|..+++.+++| ..|.|.-|+-.
T Consensus 289 G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~G--~~G~il~~~~~ 331 (334)
T PRK13684 289 GKTWEKDPVGEEVPSNFYKIVFLDPEKGFVLG--QRGVLLRYVGS 331 (334)
T ss_pred CCCCeECCcCCCCCcceEEEEEeCCCceEEEC--CCceEEEecCC
Confidence 44333332 222357888888777766655 58988877643
No 411
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=96.23 E-value=0.51 Score=38.38 Aligned_cols=172 Identities=19% Similarity=0.246 Sum_probs=86.6
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCe------EEEeeCCCCCC-ccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKT------LRIFSLPENGI-SYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~------v~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
.-+.+++|.+.+++..+++.+.+|. +..+++..... ....... ....+....+.+...-...+..
T Consensus 18 ~~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~L~~~~G~~~~~~~~D~Eg 89 (326)
T PF13449_consen 18 PFGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTIL--------DMIPLRDPDGQPFPKNGLDPEG 89 (326)
T ss_pred ccCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEec--------cceeccCCCCCcCCcCCCChhH
Confidence 4567899999976656666677777 55555443100 0000000 0000111111222112223344
Q ss_pred ceeCCCccEEEEEeCC------CCEEEEEcCCCeeeEEeecccc----------cccccceEEEEECCCCcEEEEE----
Q 022019 132 SASDPTSCVFASTTRD------HPIHLWDATTGLLRCTYRAYDA----------VDEITAAFSVAFNPTGTKIFAG---- 191 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~----------~~~~~~v~~i~~~~~~~~l~~~---- 191 (304)
+++.+++.++++.-.+ ..|+.++.. |+....+..+.. ........+|+++|+|+.|++.
T Consensus 90 i~~~~~g~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~ 168 (326)
T PF13449_consen 90 IAVPPDGSFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESP 168 (326)
T ss_pred eEEecCCCEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECcc
Confidence 4555677777777666 778888866 666555533221 1233468899999999955532
Q ss_pred --cCC--e-------EEEEEcC--CCCccceeeeeeeccc--cccccceeEEEeecCCCcEEEE
Q 022019 192 --YNK--S-------VRVFDVH--RPGRDFEKYSTLKGNK--EGQAGIMSAIAFSPTHTGMLAI 240 (304)
Q Consensus 192 --~d~--~-------i~v~d~~--~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~p~~~~~l~~ 240 (304)
.|+ . ++++... ..+.....+....... ......+..+.+-| ++.+|+.
T Consensus 169 l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~-d~~lLvL 231 (326)
T PF13449_consen 169 LKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALP-DGRLLVL 231 (326)
T ss_pred ccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEEC-CCcEEEE
Confidence 222 1 4555444 3222222222111110 01345588899998 5555543
No 412
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=96.23 E-value=0.00055 Score=56.04 Aligned_cols=131 Identities=16% Similarity=0.240 Sum_probs=89.6
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~~ 212 (304)
.+.+.-++.++.+-.+..||- .++.......+. ....++|+.++..++ .. ..+.+++||+.+... +
T Consensus 43 ~~e~~nlavaca~tiv~~YD~-agq~~le~n~tg------~aldm~wDkegdvlavlAek~~piylwd~n~eyt-----q 110 (615)
T KOG2247|consen 43 RPEGHNLAVACANTIVIYYDK-AGQVILELNPTG------KALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYT-----Q 110 (615)
T ss_pred ecCCCceehhhhhhHHHhhhh-hcceecccCCch------hHhhhhhccccchhhhhhhcCCCeeechhhhhhH-----H
Confidence 345555888888888889984 344433333322 556789999888877 34 889999999976311 1
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEE
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 281 (304)
++... ..+. -.-+.|++ +...++.+...|.+.|++....+.+...-.|...+++++|.+.+..+.
T Consensus 111 qLE~g-g~~s--~sll~wsK-g~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil 175 (615)
T KOG2247|consen 111 QLESG-GTSS--KSLLAWSK-GTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVIL 175 (615)
T ss_pred HHhcc-Ccch--HHHHhhcc-CCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeee
Confidence 11111 1112 22278999 888899999999999999887766555544888999999998876544
No 413
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=96.21 E-value=0.75 Score=40.15 Aligned_cols=56 Identities=9% Similarity=0.115 Sum_probs=35.7
Q ss_pred CeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceeee
Q 022019 245 QTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 245 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
|.|.-+|+.+++..-..........+... -.|..++.+. .+|.++.+|.++|+.+.
T Consensus 441 g~l~AiD~~tGk~~W~~~~~~p~~~~~l~-t~g~lvf~g~-~~G~l~a~D~~TGe~lw 496 (527)
T TIGR03075 441 GSLIAWDPITGKIVWEHKEDFPLWGGVLA-TAGDLVFYGT-LEGYFKAFDAKTGEELW 496 (527)
T ss_pred eeEEEEeCCCCceeeEecCCCCCCCcceE-ECCcEEEEEC-CCCeEEEEECCCCCEeE
Confidence 45677777777766655422211112111 2455677777 89999999999998764
No 414
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.02 E-value=0.24 Score=46.33 Aligned_cols=169 Identities=11% Similarity=0.137 Sum_probs=91.0
Q ss_pred eeEEEEcCC-CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEE-eecCccceeCCCccE
Q 022019 63 LKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDF-CWFPHMSASDPTSCV 140 (304)
Q Consensus 63 V~~i~~s~~-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~ 140 (304)
=+.+-+-|. ++.-+ +-|+.+.+|+..++.......... ..|..+ -..|....|.|.=++
T Consensus 81 ~~~mGiFpeI~RaWi--TiDn~L~lWny~~~~e~~~~d~~s-----------------htIl~V~LvkPkpgvFv~~Iqh 141 (1311)
T KOG1900|consen 81 KTDMGIFPEIGRAWI--TIDNNLFLWNYESDNELAEYDGLS-----------------HTILKVGLVKPKPGVFVPEIQH 141 (1311)
T ss_pred eeeeccchhhcceEE--EeCCeEEEEEcCCCCccccccchh-----------------hhheeeeeecCCCCcchhhhhe
Confidence 334444453 33333 347889999998743322222111 111111 122333334444445
Q ss_pred EEEEeCCCCEEEEEcCCCeeeE-------EeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccce----
Q 022019 141 FASTTRDHPIHLWDATTGLLRC-------TYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFE---- 209 (304)
Q Consensus 141 l~~~~~dg~i~i~d~~~~~~~~-------~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~---- 209 (304)
+++.+.--.|.++-+.-.+... .+.... ....|.++....+|+.+++|.||.++=.-......-+.
T Consensus 142 lLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~~---dg~~V~~I~~t~nGRIF~~G~dg~lyEl~Yq~~~gWf~~rc~ 218 (1311)
T KOG1900|consen 142 LLVVATPVEIVILGVSFDEFTGELSIFNTSFKISV---DGVSVNCITYTENGRIFFAGRDGNLYELVYQAEDGWFGSRCR 218 (1311)
T ss_pred eEEecccceEEEEEEEeccccCcccccccceeeec---CCceEEEEEeccCCcEEEeecCCCEEEEEEeccCchhhcccc
Confidence 5555555556666543221110 111111 12278899988899999999888554332222111000
Q ss_pred -----------eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC
Q 022019 210 -----------KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN 254 (304)
Q Consensus 210 -----------~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~ 254 (304)
....+......+..+|..++... ...++.+-++.|+|.+||+..
T Consensus 219 Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~-SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 219 KICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDN-SRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred cccCchhHHHHhhhhhhcCCCCCCCcceeeEecc-ccceeeeeccCceEEEEEccC
Confidence 00111112235667899999998 777999999999999999975
No 415
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=96.00 E-value=0.57 Score=36.87 Aligned_cols=223 Identities=13% Similarity=0.134 Sum_probs=112.5
Q ss_pred ceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEee------cCCeEEEEeecCcc-cee
Q 022019 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVT------EGESVYDFCWFPHM-SAS 134 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~-~~~ 134 (304)
.-+.|+++|.+.+-++....+...+||.......... .. ..+.+. .....+.+.|+... ..+
T Consensus 24 N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~---------~~--L~vtiP~~~~~~~~~~PTGiVfN~~~~F~v 92 (336)
T TIGR03118 24 NAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQ---------DP--LVVVIPAPPPLAAEGTPTGQVFNGSDTFVV 92 (336)
T ss_pred ccceeEecCCCCEEEecCCcceEEeecCCcccccCCc---------cc--eEEEecCCCCCCCCCCccEEEEeCCCceEE
Confidence 4678999999988787777889999998622110000 00 001111 01223344443221 111
Q ss_pred CCC----ccEEEEEeCCCCEEEEEcCCCee---eEEeecccccccccceEEEEECC--CCcEEEEE--cCCeEEEEEcCC
Q 022019 135 DPT----SCVFASTTRDHPIHLWDATTGLL---RCTYRAYDAVDEITAAFSVAFNP--TGTKIFAG--YNKSVRVFDVHR 203 (304)
Q Consensus 135 ~~~----~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~~~~~v~~i~~~~--~~~~l~~~--~d~~i~v~d~~~ 203 (304)
+.. ...++.+++||+|.-|...-+.. ...+..... .....-..+++-. .+.+|++. ..++|.|||-.-
T Consensus 93 t~~g~~~~a~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s-~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f 171 (336)
T TIGR03118 93 SGEGITGPSRFLFVTEDGTLSGWAPALGTTRMTRAEIVVDAS-QQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSF 171 (336)
T ss_pred cCCCcccceeEEEEeCCceEEeecCcCCcccccccEEEEccC-CCcceeeeeEEeecCCCceEEEeccCCCceEEecCcc
Confidence 221 12478889999999998543222 111111111 0111233455543 46777754 889999998754
Q ss_pred CCccceeeeeeecc-ccccccc-----------eeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec--cccCCeE
Q 022019 204 PGRDFEKYSTLKGN-KEGQAGI-----------MSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH--GQEGGVT 269 (304)
Q Consensus 204 ~~~~~~~~~~~~~~-~~~~~~~-----------v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~ 269 (304)
..... -..+... ......+ |+-..-.+ +.+.=+.|...|.|-+||+ .+..++.+. +.-..-+
T Consensus 172 ~~~~~--~g~F~DP~iPagyAPFnIqnig~~lyVtYA~qd~-~~~d~v~G~G~G~VdvFd~-~G~l~~r~as~g~LNaPW 247 (336)
T TIGR03118 172 RPPPL--PGSFIDPALPAGYAPFNVQNLGGTLYVTYAQQDA-DRNDEVAGAGLGYVNVFTL-NGQLLRRVASSGRLNAPW 247 (336)
T ss_pred ccccC--CCCccCCCCCCCCCCcceEEECCeEEEEEEecCC-cccccccCCCcceEEEEcC-CCcEEEEeccCCcccCCc
Confidence 21100 0000000 0000011 11111122 1222233444578999997 577777774 2222345
Q ss_pred EEEECC------CCcEEEEeeccCCeEEEEecccceee
Q 022019 270 HVQFSR------DGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 270 ~~~~~~------~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
.|+..| .|. |+.|.-.||+|..||..+++.+
T Consensus 248 G~a~APa~FG~~sg~-lLVGNFGDG~InaFD~~sG~~~ 284 (336)
T TIGR03118 248 GLAIAPESFGSLSGA-LLVGNFGDGTINAYDPQSGAQL 284 (336)
T ss_pred eeeeChhhhCCCCCC-eEEeecCCceeEEecCCCCcee
Confidence 566644 344 4445558999999999887643
No 416
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=95.95 E-value=0.042 Score=29.00 Aligned_cols=31 Identities=23% Similarity=0.239 Sum_probs=25.3
Q ss_pred CCeEEEEECCCCc---EEEEeeccCCeEEEEeccc
Q 022019 266 GGVTHVQFSRDGN---YLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 266 ~~v~~~~~~~~~~---~l~~~~~~d~~i~vwd~~~ 297 (304)
+.|.++.|+|... +|+.+- .-|.|.|+|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E-~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAE-HQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEc-cCCeEEEEEccc
Confidence 4689999998554 677766 889999999995
No 417
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=95.89 E-value=0.059 Score=40.09 Aligned_cols=106 Identities=11% Similarity=0.108 Sum_probs=58.5
Q ss_pred CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCE
Q 022019 71 DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPI 150 (304)
Q Consensus 71 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i 150 (304)
-+..++.|+.+|.|.+|+............. ....+.++ .| .-.++.+..+++.||.|
T Consensus 69 ~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s----------------~~e~i~~~--Ip----~~~~~~~~c~~~~dg~i 126 (238)
T KOG2444|consen 69 ASAKLMVGTSDGAVYVFNWNLEGAHSDRVCS----------------GEESIDLG--IP----NGRDSSLGCVGAQDGRI 126 (238)
T ss_pred cCceEEeecccceEEEecCCccchHHHhhhc----------------ccccceec--cc----cccccceeEEeccCCce
Confidence 3457888999999999988622211111000 00111111 01 12245578889999999
Q ss_pred EEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-E--EcCCeEEEEEcC
Q 022019 151 HLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-A--GYNKSVRVFDVH 202 (304)
Q Consensus 151 ~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~--~~d~~i~v~d~~ 202 (304)
+.|++.-.+.+.....+.. .++.....+..+++++ + +.|..++.|++.
T Consensus 127 r~~n~~p~k~~g~~g~h~~----~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 127 RACNIKPNKVLGYVGQHNF----ESGEELIVVGSDEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred eeeccccCceeeeeccccC----CCcceeEEecCCceEEeeccccchhhhhcchh
Confidence 9999987766655443331 1333334444444444 3 456666666664
No 418
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=95.79 E-value=0.54 Score=35.01 Aligned_cols=146 Identities=13% Similarity=0.182 Sum_probs=81.2
Q ss_pred cEEEEEeCCCCEEEEEcCC--CeeeEEeecccccccccceEEEEECCCCcEEEEE----cCC---eEEEE---EcCCCCc
Q 022019 139 CVFASTTRDHPIHLWDATT--GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG----YNK---SVRVF---DVHRPGR 206 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~--~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~----~d~---~i~v~---d~~~~~~ 206 (304)
..|+.+...+.|.+|++.. .+....+...+ .|..+.++..|+++++= ... .+++| .......
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~------~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~ 102 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTVG------RVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEEN 102 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcchh------heeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccC
Confidence 3454446677899999983 33445555443 88999999999999952 222 45664 2221111
Q ss_pred cceeeee----------------eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceE-eE-----Eec--
Q 022019 207 DFEKYST----------------LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL-LY-----VLH-- 262 (304)
Q Consensus 207 ~~~~~~~----------------~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~-~~-----~~~-- 262 (304)
..-.... +.-..-.-..++.+++-.|..|.++ +|+ ++.+.+|.+..... .. .|.
T Consensus 103 ~~v~vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~Ll-Vg~-~~~l~lf~l~~~~~~~~~~~~lDFe~~ 180 (215)
T PF14761_consen 103 SPVRVRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLL-VGC-GNKLVLFTLKYQTIQSEKFSFLDFERS 180 (215)
T ss_pred CcEEEEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEE-EEc-CCEEEEEEEEEEEEecccccEEechhh
Confidence 0000000 0000011233577888888666554 444 46888998764432 11 111
Q ss_pred ---cccC-CeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 263 ---GQEG-GVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 263 ---~~~~-~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
-|.+ ....+++. +.|+|..+ +-.+++..+.
T Consensus 181 l~~~~~~~~p~~v~ic--~~yiA~~s--~~ev~Vlkl~ 214 (215)
T PF14761_consen 181 LIDHIDNFKPTQVAIC--EGYIAVMS--DLEVLVLKLE 214 (215)
T ss_pred hhheecCceEEEEEEE--eeEEEEec--CCEEEEEEEe
Confidence 1111 24556664 67888876 6778887764
No 419
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=95.78 E-value=0.88 Score=37.36 Aligned_cols=150 Identities=16% Similarity=0.145 Sum_probs=72.7
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEE--CCCCcEEEEE----cC---------------
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAF--NPTGTKIFAG----YN--------------- 193 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~--~~~~~~l~~~----~d--------------- 193 (304)
+++++.++-......|+-.|+++.+....+..+.. .+-...| +.++..++.. .|
T Consensus 89 s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p~~-----~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~ 163 (386)
T PF14583_consen 89 SPDDRALYYVKNGRSLRRVDLDTLEERVVYEVPDD-----WKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYE 163 (386)
T ss_dssp -TTSSEEEEEETTTEEEEEETTT--EEEEEE--TT-----EEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHH
T ss_pred ecCCCeEEEEECCCeEEEEECCcCcEEEEEECCcc-----cccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHh
Confidence 56677776665667889999999887777776654 3333444 5567776621 11
Q ss_pred ----CeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEec------CCeEEEEecCCceEeEEecc
Q 022019 194 ----KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY------SQTSAIYREDNMELLYVLHG 263 (304)
Q Consensus 194 ----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~ 263 (304)
..|.-.|+.+++ .+ .+ ......+..+.|+|.+..+|+-|-+ |..|.+.+.. +.....+..
T Consensus 164 a~p~~~i~~idl~tG~--~~---~v----~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~d-g~~~~~v~~ 233 (386)
T PF14583_consen 164 ARPHCRIFTIDLKTGE--RK---VV----FEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTD-GSNVKKVHR 233 (386)
T ss_dssp C---EEEEEEETTT----EE---EE----EEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETT-S---EESS-
T ss_pred hCCCceEEEEECCCCc--ee---EE----EecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcC-CCcceeeec
Confidence 124444554421 11 11 1123457789999987877777765 2234444433 333333332
Q ss_pred cc--CCeEEEEECCCCcEEEEee----ccCCeEEEEecccce
Q 022019 264 QE--GGVTHVQFSRDGNYLYTGG----RKDPYILCWDLRKAV 299 (304)
Q Consensus 264 ~~--~~v~~~~~~~~~~~l~~~~----~~d~~i~vwd~~~~~ 299 (304)
+. ..+..=-|.|||..|.--+ ..+..|.-+|+.+++
T Consensus 234 ~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~ 275 (386)
T PF14583_consen 234 RMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGE 275 (386)
T ss_dssp --TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--
T ss_pred CCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCC
Confidence 22 2345556899998765432 134567777777764
No 420
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=95.70 E-value=1.2 Score=39.24 Aligned_cols=146 Identities=15% Similarity=0.212 Sum_probs=74.0
Q ss_pred CccEEEEEeCC------CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCC-----eEEEEEcCCC
Q 022019 137 TSCVFASTTRD------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNK-----SVRVFDVHRP 204 (304)
Q Consensus 137 ~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~-----~i~v~d~~~~ 204 (304)
++.++++|+.| .++..||.+..+... ......... . .+++.. +|...++| .|| +|..||.++.
T Consensus 332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~-~a~M~~~R~--~-~~v~~l-~g~iYavGG~dg~~~l~svE~YDp~~~ 406 (571)
T KOG4441|consen 332 NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTP-VAPMNTKRS--D-FGVAVL-DGKLYAVGGFDGEKSLNSVECYDPVTN 406 (571)
T ss_pred CCEEEEEccccCCCcccceEEEecCCCCceec-cCCccCccc--c-ceeEEE-CCEEEEEeccccccccccEEEecCCCC
Confidence 56788899888 357788888776433 221111111 1 112211 35555544 665 4777887652
Q ss_pred CccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCC------eEEEEecCCce--EeEEeccccCCeEEEEECCC
Q 022019 205 GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ------TSAIYREDNME--LLYVLHGQEGGVTHVQFSRD 276 (304)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg------~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~ 276 (304)
.+.....+. . .........-++.++++|+.++ ++..||..+++ .+..+..-........+ +
T Consensus 407 --~W~~va~m~----~---~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~~--~ 475 (571)
T KOG4441|consen 407 --KWTPVAPML----T---RRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAVL--N 475 (571)
T ss_pred --cccccCCCC----c---ceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccceEEEE--C
Confidence 121111111 1 1112222222677888888654 47788887654 33333322222222333 4
Q ss_pred CcEEEEeeccCC-----eEEEEecccce
Q 022019 277 GNYLYTGGRKDP-----YILCWDLRKAV 299 (304)
Q Consensus 277 ~~~l~~~~~~d~-----~i~vwd~~~~~ 299 (304)
+...+.|| .|+ ++..||..+.+
T Consensus 476 ~~iYvvGG-~~~~~~~~~VE~ydp~~~~ 502 (571)
T KOG4441|consen 476 GKIYVVGG-FDGTSALSSVERYDPETNQ 502 (571)
T ss_pred CEEEEECC-ccCCCccceEEEEcCCCCc
Confidence 66666666 665 36667776643
No 421
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=95.64 E-value=1 Score=37.03 Aligned_cols=141 Identities=13% Similarity=0.044 Sum_probs=69.8
Q ss_pred ccceeCCCccEEEEEeC-CC--CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCC
Q 022019 130 HMSASDPTSCVFASTTR-DH--PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPG 205 (304)
Q Consensus 130 ~~~~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~ 205 (304)
..-.|.++|+.|+.++. || .+++.|+.+++..+.-..... ...+..++|+++.++ .-.+..++-.|+++.+
T Consensus 39 ~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~-----~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e 113 (386)
T PF14583_consen 39 YQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGD-----NTFGGFLSPDDRALYYVKNGRSLRRVDLDTLE 113 (386)
T ss_dssp TS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B------TTT-EE-TTSSEEEEEETTTEEEEEETTT--
T ss_pred cCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCC-----CccceEEecCCCeEEEEECCCeEEEEECCcCc
Confidence 33456788866555544 54 577888988887665443322 222456678877776 6677789999998742
Q ss_pred ccceeeeeeeccccccccceeEEEee-cCCCcEEEEEec----------------------CCeEEEEecCCceEeEEec
Q 022019 206 RDFEKYSTLKGNKEGQAGIMSAIAFS-PTHTGMLAIGSY----------------------SQTSAIYREDNMELLYVLH 262 (304)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~l~~~~~----------------------dg~i~i~d~~~~~~~~~~~ 262 (304)
. ..+... ....+....|. +.++..++-.-. ...|.-.|+.+++....+.
T Consensus 114 ~--~~vy~~------p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~ 185 (386)
T PF14583_consen 114 E--RVVYEV------PDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFE 185 (386)
T ss_dssp E--EEEEE--------TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEE
T ss_pred E--EEEEEC------CcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEe
Confidence 1 122222 12223334453 223433322211 1135556777776544444
Q ss_pred cccCCeEEEEECCCCcEEEEee
Q 022019 263 GQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 263 ~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
-..++..+.|+|....+++=+
T Consensus 186 -~~~wlgH~~fsP~dp~li~fC 206 (386)
T PF14583_consen 186 -DTDWLGHVQFSPTDPTLIMFC 206 (386)
T ss_dssp -ESS-EEEEEEETTEEEEEEEE
T ss_pred -cCccccCcccCCCCCCEEEEe
Confidence 456788999999776655544
No 422
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=95.58 E-value=0.14 Score=38.74 Aligned_cols=68 Identities=10% Similarity=0.084 Sum_probs=48.8
Q ss_pred CCccEEEEEeCCCCEEEEEcCCCeeeEEe-eccccc--------ccccceEEEEECCCCcEEEEEcCCeEEEEEcCC
Q 022019 136 PTSCVFASTTRDHPIHLWDATTGLLRCTY-RAYDAV--------DEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHR 203 (304)
Q Consensus 136 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~--------~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~ 203 (304)
..+.++++...+|.+++||+.+++....- ....-. .....|..+.++.+|.-+++=.+|..+.|+...
T Consensus 20 ~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsng~~y~y~~~L 96 (219)
T PF07569_consen 20 CNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSNGDSYSYSPDL 96 (219)
T ss_pred eCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeCCCEEEecccc
Confidence 36778999999999999999987754332 111100 233478889999888877765678889998765
No 423
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=95.56 E-value=0.16 Score=38.45 Aligned_cols=63 Identities=8% Similarity=0.019 Sum_probs=48.9
Q ss_pred CCcEEEEEecCCeEEEEecCCceEeEEe-------c-------cccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 234 HTGMLAIGSYSQTSAIYREDNMELLYVL-------H-------GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 234 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------~-------~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
.+.++++-+.+|.+++||+.+++.+..- . .....|..+.++.+|.-|++-+ +|..+.|+..-+
T Consensus 21 ~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls--ng~~y~y~~~L~ 97 (219)
T PF07569_consen 21 NGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS--NGDSYSYSPDLG 97 (219)
T ss_pred CCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe--CCCEEEeccccc
Confidence 5567999999999999999988754332 1 2446789999999998887766 688899987654
No 424
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=95.51 E-value=1.1 Score=36.56 Aligned_cols=112 Identities=17% Similarity=0.202 Sum_probs=53.0
Q ss_pred CccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecc-c-ccccccceEEEEECCC---CcEEE-EEc-C--------
Q 022019 129 PHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAY-D-AVDEITAAFSVAFNPT---GTKIF-AGY-N-------- 193 (304)
Q Consensus 129 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~-~~~~~~~v~~i~~~~~---~~~l~-~~~-d-------- 193 (304)
|..+++.|+|+++++ ...|.|++++ ..+.....+... . ..........++++|+ ..+|+ +.. .
T Consensus 4 P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~ 81 (331)
T PF07995_consen 4 PRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDND 81 (331)
T ss_dssp EEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEE
T ss_pred ceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcc
Confidence 334455788877665 5699999999 455442222111 1 1122347789999994 34444 222 1
Q ss_pred CeEEEEEcCCCCccceeeeeeecccc---ccccceeEEEeecCCCcEEEEEec
Q 022019 194 KSVRVFDVHRPGRDFEKYSTLKGNKE---GQAGIMSAIAFSPTHTGMLAIGSY 243 (304)
Q Consensus 194 ~~i~v~d~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~p~~~~~l~~~~~ 243 (304)
..|.-|..............+..... .....-..|.|.| ++.++++.+.
T Consensus 82 ~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgp-DG~LYvs~G~ 133 (331)
T PF07995_consen 82 NRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGP-DGKLYVSVGD 133 (331)
T ss_dssp EEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-T-TSEEEEEEB-
T ss_pred eeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCC-CCcEEEEeCC
Confidence 23444554433112221122211111 1222355799999 5555555544
No 425
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=95.43 E-value=0.5 Score=32.21 Aligned_cols=121 Identities=11% Similarity=0.024 Sum_probs=73.2
Q ss_pred eEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEE
Q 022019 64 KGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFAS 143 (304)
Q Consensus 64 ~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~ 143 (304)
..-+|......|+.++.-|.|.|++.......... .......+.-+..|++++-.+-.. +.+...|+.
T Consensus 2 aiGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~----------~~~~i~~LNin~~italaaG~l~~--~~~~D~Lli 69 (136)
T PF14781_consen 2 AIGKFDGVHPCLACATTGGKVFIHNPHERGQRTGR----------QDSDISFLNINQEITALAAGRLKP--DDGRDCLLI 69 (136)
T ss_pred eEEEeCCCceeEEEEecCCEEEEECCCcccccccc----------ccCceeEEECCCceEEEEEEecCC--CCCcCEEEE
Confidence 34567766678888999999999987644321110 111123344456677765433211 234456777
Q ss_pred EeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECC----CCcEEEEEcCCeEEEEEcCC
Q 022019 144 TTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP----TGTKIFAGYNKSVRVFDVHR 203 (304)
Q Consensus 144 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~----~~~~l~~~~d~~i~v~d~~~ 203 (304)
|+.. .+..||+.....+.....+. .|.++.+-. +...+++|.+..|.-||...
T Consensus 70 Gt~t-~llaYDV~~N~d~Fyke~~D------Gvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G 126 (136)
T PF14781_consen 70 GTQT-SLLAYDVENNSDLFYKEVPD------GVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEG 126 (136)
T ss_pred eccc-eEEEEEcccCchhhhhhCcc------ceeEEEEEecCCCCCcEEEECceEEEEEeCCCC
Confidence 7654 59999998776554333333 566666622 34566688888888888754
No 426
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=95.41 E-value=0.77 Score=41.47 Aligned_cols=75 Identities=11% Similarity=0.092 Sum_probs=49.2
Q ss_pred ceeEEEeecCCCcEEEEEecCCeEEEEecC---------CceE--e-EEe--------ccccCCeEEEEECCC---CcEE
Q 022019 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYRED---------NMEL--L-YVL--------HGQEGGVTHVQFSRD---GNYL 280 (304)
Q Consensus 224 ~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~---------~~~~--~-~~~--------~~~~~~v~~~~~~~~---~~~l 280 (304)
.|..+.++| .+.+++..+..|.+.+.=.+ .++. . .++ ..+...|..+.|+|. +..|
T Consensus 86 ~v~~i~~n~-~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l 164 (717)
T PF10168_consen 86 EVHQISLNP-TGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL 164 (717)
T ss_pred eEEEEEECC-CCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence 488999999 67777777776654332211 1111 1 111 123457999999997 4778
Q ss_pred EEeeccCCeEEEEeccccee
Q 022019 281 YTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 281 ~~~~~~d~~i~vwd~~~~~~ 300 (304)
+.-. .|+++++||+.....
T Consensus 165 ~vLt-sdn~lR~y~~~~~~~ 183 (717)
T PF10168_consen 165 VVLT-SDNTLRLYDISDPQH 183 (717)
T ss_pred EEEe-cCCEEEEEecCCCCC
Confidence 8777 899999999976543
No 427
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=95.34 E-value=0.73 Score=33.51 Aligned_cols=36 Identities=19% Similarity=0.379 Sum_probs=28.7
Q ss_pred eEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCC
Q 022019 121 SVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 157 (304)
Q Consensus 121 ~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 157 (304)
.+..++|.|..++- ..+.+|++...+|.|.||.-..
T Consensus 87 ~vv~~aWSP~Gl~~-~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 87 QVVSAAWSPSGLGP-NGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred cEEEEEECCCCCCC-CCceEEEEEcCCCeEEEEecCC
Confidence 78899999976642 2467889999999999998663
No 428
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=95.17 E-value=1 Score=34.09 Aligned_cols=117 Identities=11% Similarity=0.068 Sum_probs=71.7
Q ss_pred ceEEEEECCCCcEEEEE-cC---------CeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC
Q 022019 175 AAFSVAFNPTGTKIFAG-YN---------KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS 244 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~-~d---------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d 244 (304)
..+.-..+|+|++++.. .| |.++.|-... ..+.+ ...-..-..++|+.+...+.++-+.+
T Consensus 110 R~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h---~v~~i-------~~~v~IsNgl~Wd~d~K~fY~iDsln 179 (310)
T KOG4499|consen 110 RLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGH---QVELI-------WNCVGISNGLAWDSDAKKFYYIDSLN 179 (310)
T ss_pred ccccCccCCCCceeeeeeccccccccccccEEEEeccCC---Cceee-------ehhccCCccccccccCcEEEEEccCc
Confidence 55677889999996632 22 4455554422 11111 11223346789998667777888888
Q ss_pred CeEEEEe--cCCc-----eEeEEeccc----cCCeEEEEECCCCcEEEEeeccCCeEEEEecccceeee
Q 022019 245 QTSAIYR--EDNM-----ELLYVLHGQ----EGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 245 g~i~i~d--~~~~-----~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
-.|.-|| ..++ +.+..++.. ...--.++...+|...+++- ..++|...|..+|+.++
T Consensus 180 ~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~-ng~~V~~~dp~tGK~L~ 247 (310)
T KOG4499|consen 180 YEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATF-NGGTVQKVDPTTGKILL 247 (310)
T ss_pred eEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEe-cCcEEEEECCCCCcEEE
Confidence 8897787 4444 334444321 11123455566787766666 78899999999998765
No 429
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=95.11 E-value=1.2 Score=34.59 Aligned_cols=146 Identities=11% Similarity=0.065 Sum_probs=85.5
Q ss_pred CCccEEEEEeCCC--CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceee
Q 022019 136 PTSCVFASTTRDH--PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 136 ~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
.++.++-+.+.-| .|+.+|+.+++........... .-..+....+ .|. .. .++...+||..+. +..
T Consensus 54 ~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~----FgEGit~~~d--~l~qLTWk~~~~f~yd~~tl----~~~ 123 (264)
T PF05096_consen 54 DDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRY----FGEGITILGD--KLYQLTWKEGTGFVYDPNTL----KKI 123 (264)
T ss_dssp ETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT------EEEEEEETT--EEEEEESSSSEEEEEETTTT----EEE
T ss_pred CCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccc----cceeEEEECC--EEEEEEecCCeEEEEccccc----eEE
Confidence 4677788887766 7999999999887766655421 2234555433 444 45 9999999999753 333
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc-----CCeEEEEECCCCcEEEEeecc
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE-----GGVTHVQFSRDGNYLYTGGRK 286 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~~ 286 (304)
..+.. . .. =..++ . ++..|+.......++++|..+.+....+.... ..++.+.|- +|...|=.= .
T Consensus 124 ~~~~y--~-~E--GWGLt--~-dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW-~ 193 (264)
T PF05096_consen 124 GTFPY--P-GE--GWGLT--S-DGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVW-Q 193 (264)
T ss_dssp EEEE---S-SS----EEE--E-CSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEET-T
T ss_pred EEEec--C-Cc--ceEEE--c-CCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeC-C
Confidence 33322 1 12 23455 3 33455555556789999998887766665322 246667775 565444444 6
Q ss_pred CCeEEEEecccceee
Q 022019 287 DPYILCWDLRKAVQV 301 (304)
Q Consensus 287 d~~i~vwd~~~~~~~ 301 (304)
...|...|..+|+.+
T Consensus 194 td~I~~Idp~tG~V~ 208 (264)
T PF05096_consen 194 TDRIVRIDPETGKVV 208 (264)
T ss_dssp SSEEEEEETTT-BEE
T ss_pred CCeEEEEeCCCCeEE
Confidence 667777788877654
No 430
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=95.09 E-value=1.8 Score=36.72 Aligned_cols=58 Identities=12% Similarity=0.162 Sum_probs=34.4
Q ss_pred cCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccc--cccccceEEEEECCCC
Q 022019 128 FPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDA--VDEITAAFSVAFNPTG 185 (304)
Q Consensus 128 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~~~v~~i~~~~~~ 185 (304)
.|..++|.|++++|++--..|.|++++..++........... .........|+++|+-
T Consensus 31 ~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 31 KPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred CceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence 345556688998777655469999998655432221111110 0113478899999874
No 431
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=95.04 E-value=1.8 Score=36.25 Aligned_cols=110 Identities=11% Similarity=0.042 Sum_probs=65.8
Q ss_pred ceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccce--eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEec
Q 022019 175 AAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFE--KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~ 252 (304)
.+.++.|.+++..++++..|.+..=+-. +.... .+..... ......+.++.|.+ ++..+ +++..|.+..-.
T Consensus 282 ~l~~v~~~~dg~l~l~g~~G~l~~S~d~--G~~~~~~~f~~~~~--~~~~~~l~~v~~~~-d~~~~-a~G~~G~v~~s~- 354 (398)
T PLN00033 282 RIQNMGWRADGGLWLLTRGGGLYVSKGT--GLTEEDFDFEEADI--KSRGFGILDVGYRS-KKEAW-AAGGSGILLRST- 354 (398)
T ss_pred ceeeeeEcCCCCEEEEeCCceEEEecCC--CCcccccceeeccc--CCCCcceEEEEEcC-CCcEE-EEECCCcEEEeC-
Confidence 6789999999999998888876553322 11110 1111111 11223478899987 55454 455677666654
Q ss_pred CCceEeEEe---ccccCCeEEEEECCCCcEEEEeeccCCeEEEE
Q 022019 253 DNMELLYVL---HGQEGGVTHVQFSRDGNYLYTGGRKDPYILCW 293 (304)
Q Consensus 253 ~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vw 293 (304)
..++.-... ..-...++.+.|.++++.+++| .+|.|.-|
T Consensus 355 D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G--~~G~il~~ 396 (398)
T PLN00033 355 DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG--NDGVLLRY 396 (398)
T ss_pred CCCcceeEccccCCCCcceeEEEEcCCCceEEEe--CCcEEEEe
Confidence 344432222 2234568999998877766665 58887655
No 432
>PHA02790 Kelch-like protein; Provisional
Probab=95.03 E-value=2.1 Score=37.04 Aligned_cols=144 Identities=8% Similarity=0.012 Sum_probs=69.9
Q ss_pred CccEEEEEeCC--CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcC---CeEEEEEcCCCCcccee
Q 022019 137 TSCVFASTTRD--HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYN---KSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 137 ~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d---~~i~v~d~~~~~~~~~~ 210 (304)
++.+.+.|+.+ .++..||..+++....-..... ......+.+ +|+..+. |.+ ..+..||.++. .+..
T Consensus 318 ~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~---r~~~~~~~~--~g~IYviGG~~~~~~~ve~ydp~~~--~W~~ 390 (480)
T PHA02790 318 NNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKP---RCNPAVASI--NNVIYVIGGHSETDTTTEYLLPNHD--QWQF 390 (480)
T ss_pred CCEEEEECCcCCCCceEEEECCCCeEEECCCCCCC---CcccEEEEE--CCEEEEecCcCCCCccEEEEeCCCC--EEEe
Confidence 66777777754 3577888766543322111111 001112222 4555554 433 34677887652 2211
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce--EeEEeccccCCeEEEEECCCCcEEEEeeccC-
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKD- 287 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d- 287 (304)
...+. .. .... +++ .- ++.+++.|+ .+.+||.++.+ .+..+.........+.+ +|+..+.|| .+
T Consensus 391 ~~~m~---~~-r~~~-~~~-~~-~~~IYv~GG---~~e~ydp~~~~W~~~~~m~~~r~~~~~~v~--~~~IYviGG-~~~ 457 (480)
T PHA02790 391 GPSTY---YP-HYKS-CAL-VF-GRRLFLVGR---NAEFYCESSNTWTLIDDPIYPRDNPELIIV--DNKLLLIGG-FYR 457 (480)
T ss_pred CCCCC---Cc-cccc-eEE-EE-CCEEEEECC---ceEEecCCCCcEeEcCCCCCCccccEEEEE--CCEEEEECC-cCC
Confidence 11111 11 1111 222 22 566777774 57789887654 33333222222333333 567777776 43
Q ss_pred ----CeEEEEeccccee
Q 022019 288 ----PYILCWDLRKAVQ 300 (304)
Q Consensus 288 ----~~i~vwd~~~~~~ 300 (304)
..+..||..+.+-
T Consensus 458 ~~~~~~ve~Yd~~~~~W 474 (480)
T PHA02790 458 GSYIDTIEVYNNRTYSW 474 (480)
T ss_pred CcccceEEEEECCCCeE
Confidence 4688888887653
No 433
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.01 E-value=0.45 Score=40.24 Aligned_cols=75 Identities=9% Similarity=0.045 Sum_probs=48.1
Q ss_pred eeEEEeecCCCcEEEEEecCCeEEEEe---------cCCceEeEEec-----------cccCCeEEEEECCCC---cEEE
Q 022019 225 MSAIAFSPTHTGMLAIGSYSQTSAIYR---------EDNMELLYVLH-----------GQEGGVTHVQFSRDG---NYLY 281 (304)
Q Consensus 225 v~~~~~~p~~~~~l~~~~~dg~i~i~d---------~~~~~~~~~~~-----------~~~~~v~~~~~~~~~---~~l~ 281 (304)
|..+..+| .|..++-.+.+|.+..+= ++.+++.-..+ ...-.+..++|+|+. ..|.
T Consensus 106 V~~vl~s~-~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~ 184 (741)
T KOG4460|consen 106 VYQVLLSP-TGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLV 184 (741)
T ss_pred EEEEEecC-CCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEE
Confidence 67788889 566677777778655442 12332221111 112257788999976 5666
Q ss_pred EeeccCCeEEEEecccceee
Q 022019 282 TGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 282 ~~~~~d~~i~vwd~~~~~~~ 301 (304)
.-. .|++|++||+.....+
T Consensus 185 iL~-sdnviRiy~lS~~tel 203 (741)
T KOG4460|consen 185 LLT-SDNVIRIYSLSEPTEL 203 (741)
T ss_pred EEe-cCcEEEEEecCCcchh
Confidence 666 7999999999876654
No 434
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=94.96 E-value=2.9 Score=38.31 Aligned_cols=221 Identities=14% Similarity=0.155 Sum_probs=112.3
Q ss_pred CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc--cc-------eeCCCccEE
Q 022019 71 DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH--MS-------ASDPTSCVF 141 (304)
Q Consensus 71 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~-------~~~~~~~~l 141 (304)
.+..|+.++.++.|.-.|..+++................. .....+.+... .. +-...+..+
T Consensus 193 vgg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~---------~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV 263 (764)
T TIGR03074 193 VGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQH---------QTCRGVSYYDAPAAAAGPAAPAAPADCARRI 263 (764)
T ss_pred ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccc---------ccccceEEecCCcccccccccccccccCCEE
Confidence 3557777888899999999888775544332211000000 00011111100 00 001234577
Q ss_pred EEEeCCCCEEEEEcCCCeeeEEeeccccc------cc-ccceEEEEECC---CCcEEEEEc----------CCeEEEEEc
Q 022019 142 ASTTRDHPIHLWDATTGLLRCTYRAYDAV------DE-ITAAFSVAFNP---TGTKIFAGY----------NKSVRVFDV 201 (304)
Q Consensus 142 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------~~-~~~v~~i~~~~---~~~~l~~~~----------d~~i~v~d~ 201 (304)
+.++.|+.+.-.|.++|+....+...... .. ...-..+.-.| ++..++.+. +|.|+-+|.
T Consensus 264 ~~~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da 343 (764)
T TIGR03074 264 ILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDV 343 (764)
T ss_pred EEecCCCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEEC
Confidence 78888999999999999887665432110 00 00001111222 344444321 578999999
Q ss_pred CCCCccceeeeeeec-c--c-c------ccccceeEEEeecCCCcEEEEEe------------------cCCeEEEEecC
Q 022019 202 HRPGRDFEKYSTLKG-N--K-E------GQAGIMSAIAFSPTHTGMLAIGS------------------YSQTSAIYRED 253 (304)
Q Consensus 202 ~~~~~~~~~~~~~~~-~--~-~------~~~~~v~~~~~~p~~~~~l~~~~------------------~dg~i~i~d~~ 253 (304)
++++........-.. . . . +....-..++++|..+ +++.+. ..+.|.-.|.+
T Consensus 344 ~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~g-lvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~ 422 (764)
T TIGR03074 344 NTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLG-LVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDAT 422 (764)
T ss_pred CCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCC-eEEEeCCCccccccCCccccCcccccceEEEEeCC
Confidence 886543322110000 0 0 0 0001113455666333 333322 13456667888
Q ss_pred CceEeEEeccccCCe---------EEEEECC-CCc---EEEEeeccCCeEEEEecccceeee
Q 022019 254 NMELLYVLHGQEGGV---------THVQFSR-DGN---YLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 254 ~~~~~~~~~~~~~~v---------~~~~~~~-~~~---~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
+++..-.++.....+ .-+.+.. +|+ .++.+. ++|.+.+.|-++|+.+.
T Consensus 423 TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~-K~G~~~vlDr~tG~~l~ 483 (764)
T TIGR03074 423 TGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPT-KQGQIYVLDRRTGEPIV 483 (764)
T ss_pred CCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEEC-CCCEEEEEECCCCCEEe
Confidence 888777665311111 1122322 563 688888 99999999999998764
No 435
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=94.93 E-value=0.17 Score=26.11 Aligned_cols=30 Identities=20% Similarity=0.383 Sum_probs=21.6
Q ss_pred ccCCeEEEEECCCCcEEEEeeccC--CeEEEE
Q 022019 264 QEGGVTHVQFSRDGNYLYTGGRKD--PYILCW 293 (304)
Q Consensus 264 ~~~~v~~~~~~~~~~~l~~~~~~d--~~i~vw 293 (304)
....-....|+|||++|+-++..+ |.-.||
T Consensus 7 ~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 7 SPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 445678899999999988777566 666555
No 436
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=94.82 E-value=0.018 Score=51.23 Aligned_cols=99 Identities=11% Similarity=0.111 Sum_probs=60.7
Q ss_pred CeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecC--CCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEE
Q 022019 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPT--HTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHV 271 (304)
Q Consensus 194 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~ 271 (304)
|.+.|||+..-...+.....+ .........+.-+.|.|- +.-++..+-.++.|++........ ..+.+|..+++.+
T Consensus 153 g~lfVy~vd~l~G~iq~~l~v-~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~ 230 (1283)
T KOG1916|consen 153 GELFVYDVDVLQGEIQPQLEV-TPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDM 230 (1283)
T ss_pred hhhheeehHhhccccccceEE-eecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccH
Confidence 567888886533222211111 111223334456666652 345667777788888877644322 4455677665554
Q ss_pred E-----------ECCCCcEEEEeeccCCeEEEEec
Q 022019 272 Q-----------FSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 272 ~-----------~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
+ .||||+.+++++ .||.+++|.+
T Consensus 231 a~~~~g~~~l~~lSpDGtv~a~a~-~dG~v~f~Qi 264 (1283)
T KOG1916|consen 231 AFFAEGVLKLASLSPDGTVFAWAI-SDGSVGFYQI 264 (1283)
T ss_pred HHHhhchhhheeeCCCCcEEEEee-cCCccceeee
Confidence 4 589999999999 9999999876
No 437
>PHA02713 hypothetical protein; Provisional
Probab=94.74 E-value=1.4 Score=38.93 Aligned_cols=144 Identities=8% Similarity=0.021 Sum_probs=68.2
Q ss_pred CccEEEEEeCC------CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcC-----CeEEEEEcCCC
Q 022019 137 TSCVFASTTRD------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYN-----KSVRVFDVHRP 204 (304)
Q Consensus 137 ~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d-----~~i~v~d~~~~ 204 (304)
++.+++.|+.+ ..+..||..+......-..... .... +++. -+|+..+. |.+ ..+..||..+.
T Consensus 303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~---R~~~-~~~~-~~g~IYviGG~~~~~~~~sve~Ydp~~~ 377 (557)
T PHA02713 303 DNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKN---RCRF-SLAV-IDDTIYAIGGQNGTNVERTIECYTMGDD 377 (557)
T ss_pred CCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcch---hhce-eEEE-ECCEEEEECCcCCCCCCceEEEEECCCC
Confidence 56677777753 3477889877654221111110 0011 2222 24555554 444 24788998752
Q ss_pred CccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCC-----------------------eEEEEecCCce--EeE
Q 022019 205 GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ-----------------------TSAIYREDNME--LLY 259 (304)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg-----------------------~i~i~d~~~~~--~~~ 259 (304)
.+.....+.... .....+.+ ++.+++.|+.++ .+..||..+.+ .+.
T Consensus 378 --~W~~~~~mp~~r----~~~~~~~~---~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~ 448 (557)
T PHA02713 378 --KWKMLPDMPIAL----SSYGMCVL---DQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLP 448 (557)
T ss_pred --eEEECCCCCccc----ccccEEEE---CCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecC
Confidence 222211111111 11112222 566888887652 47788877654 233
Q ss_pred EeccccCCeEEEEECCCCcEEEEeeccC------CeEEEEeccc
Q 022019 260 VLHGQEGGVTHVQFSRDGNYLYTGGRKD------PYILCWDLRK 297 (304)
Q Consensus 260 ~~~~~~~~v~~~~~~~~~~~l~~~~~~d------~~i~vwd~~~ 297 (304)
.+.........+.+ +|+..+.|| .+ ..+..||..+
T Consensus 449 ~m~~~r~~~~~~~~--~~~IYv~GG-~~~~~~~~~~ve~Ydp~~ 489 (557)
T PHA02713 449 NFWTGTIRPGVVSH--KDDIYVVCD-IKDEKNVKTCIFRYNTNT 489 (557)
T ss_pred CCCcccccCcEEEE--CCEEEEEeC-CCCCCccceeEEEecCCC
Confidence 33211111122222 456555565 43 2466788876
No 438
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=94.70 E-value=2 Score=35.70 Aligned_cols=103 Identities=14% Similarity=0.241 Sum_probs=55.7
Q ss_pred ceEEEEECCCCcEEEEEc------------CC-eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEE
Q 022019 175 AAFSVAFNPTGTKIFAGY------------NK-SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIG 241 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~~------------d~-~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~ 241 (304)
....|+|+++|+++++.. .+ .|.+++-............+... ......+++.+ ++ +++ +
T Consensus 15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~----l~~p~Gi~~~~-~G-lyV-~ 87 (367)
T TIGR02604 15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEE----LSMVTGLAVAV-GG-VYV-A 87 (367)
T ss_pred CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecC----CCCccceeEec-CC-EEE-e
Confidence 556899999999887631 22 67777644322222222222211 22357889988 66 444 4
Q ss_pred ecCCeEEEEecCC-------ce-EeEEecc----ccCCeEEEEECCCCcEEEEee
Q 022019 242 SYSQTSAIYREDN-------ME-LLYVLHG----QEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 242 ~~dg~i~i~d~~~-------~~-~~~~~~~----~~~~v~~~~~~~~~~~l~~~~ 284 (304)
+.....++.|... .+ .+..+.. +......+.|.|||.+.++.+
T Consensus 88 ~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 88 TPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG 142 (367)
T ss_pred CCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence 4443333445432 11 2222322 134578899999998655544
No 439
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=94.67 E-value=3.1 Score=37.33 Aligned_cols=165 Identities=8% Similarity=0.054 Sum_probs=88.2
Q ss_pred ecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeE------Eeecc-------cc----cccccceEEEEECC--CCcE
Q 022019 127 WFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRC------TYRAY-------DA----VDEITAAFSVAFNP--TGTK 187 (304)
Q Consensus 127 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~------~~~~~-------~~----~~~~~~v~~i~~~~--~~~~ 187 (304)
|.-+..+.+. +.+++++. .+.|.||++..-.... .+... .. ......|+.|.... ....
T Consensus 39 fKNNLtalsq-~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EV 116 (717)
T PF08728_consen 39 FKNNLTALSQ-RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEV 116 (717)
T ss_pred cccceeEEec-CCEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeE
Confidence 4333333343 55666655 6789999986432211 11000 00 00112455554443 2345
Q ss_pred EEE-EcCCeEEEEEcCCCCccceee----------eee-eccccccccceeEEEee--cCCCcEEEEEecCCeEEEEecC
Q 022019 188 IFA-GYNKSVRVFDVHRPGRDFEKY----------STL-KGNKEGQAGIMSAIAFS--PTHTGMLAIGSYSQTSAIYRED 253 (304)
Q Consensus 188 l~~-~~d~~i~v~d~~~~~~~~~~~----------~~~-~~~~~~~~~~v~~~~~~--p~~~~~l~~~~~dg~i~i~d~~ 253 (304)
|++ ..||.|.+|.++.--..+... ..+ ............+++++ . ..++||+++....|.||-..
T Consensus 117 Ll~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~-~~rlIAVSsNs~~VTVFaf~ 195 (717)
T PF08728_consen 117 LLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYK-KSRLIAVSSNSQEVTVFAFA 195 (717)
T ss_pred EEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecC-cceEEEEecCCceEEEEEEe
Confidence 554 499999999773210000000 000 00001122357788988 6 67788888888888887554
Q ss_pred Cc--e-EeEEeccccCCeEEEEECCCC-----c-EEEEeeccCCeEEEEec
Q 022019 254 NM--E-LLYVLHGQEGGVTHVQFSRDG-----N-YLYTGGRKDPYILCWDL 295 (304)
Q Consensus 254 ~~--~-~~~~~~~~~~~v~~~~~~~~~-----~-~l~~~~~~d~~i~vwd~ 295 (304)
.. + ....-..|...|-+++|-++. . +|++++ -.|.+.+|++
T Consensus 196 l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~d-I~G~v~~~~I 245 (717)
T PF08728_consen 196 LVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATD-ISGEVWTFKI 245 (717)
T ss_pred ccccccccccccccccCCCeeEeecCCCCCccceEEEEEe-ccCcEEEEEE
Confidence 32 1 111111255678899996543 2 677777 8999999888
No 440
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=94.66 E-value=0.33 Score=35.34 Aligned_cols=31 Identities=19% Similarity=0.299 Sum_probs=25.5
Q ss_pred ceeEEEeecC-----CCcEEEEEecCCeEEEEecCC
Q 022019 224 IMSAIAFSPT-----HTGMLAIGSYSQTSAIYREDN 254 (304)
Q Consensus 224 ~v~~~~~~p~-----~~~~l~~~~~dg~i~i~d~~~ 254 (304)
.+..++|||. .+-+|++.+.+|.|.||....
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 6889999993 245899999999999998653
No 441
>PRK13684 Ycf48-like protein; Provisional
Probab=94.55 E-value=2.2 Score=34.92 Aligned_cols=106 Identities=9% Similarity=0.117 Sum_probs=62.3
Q ss_pred ceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC
Q 022019 175 AAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN 254 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~ 254 (304)
.+..+.+.|++.+++++..|.+..- .+..+..+... . ......++++.+.| ++.++++| ..|.+.+=..+.
T Consensus 174 ~~~~i~~~~~g~~v~~g~~G~i~~s-~~~gg~tW~~~---~---~~~~~~l~~i~~~~-~g~~~~vg-~~G~~~~~s~d~ 244 (334)
T PRK13684 174 VVRNLRRSPDGKYVAVSSRGNFYST-WEPGQTAWTPH---Q---RNSSRRLQSMGFQP-DGNLWMLA-RGGQIRFNDPDD 244 (334)
T ss_pred eEEEEEECCCCeEEEEeCCceEEEE-cCCCCCeEEEe---e---CCCcccceeeeEcC-CCCEEEEe-cCCEEEEccCCC
Confidence 6789999999988888888866542 11222222211 1 22345688999999 56566554 567665433344
Q ss_pred ceEeEEecc----ccCCeEEEEECCCCcEEEEeeccCCeEE
Q 022019 255 MELLYVLHG----QEGGVTHVQFSRDGNYLYTGGRKDPYIL 291 (304)
Q Consensus 255 ~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~d~~i~ 291 (304)
+..-..... ....+.++.+.|++..++++ .+|.+.
T Consensus 245 G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~G--~~G~v~ 283 (334)
T PRK13684 245 LESWSKPIIPEITNGYGYLDLAYRTPGEIWAGG--GNGTLL 283 (334)
T ss_pred CCccccccCCccccccceeeEEEcCCCCEEEEc--CCCeEE
Confidence 432222221 12357889999988766554 467554
No 442
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=94.43 E-value=1 Score=30.76 Aligned_cols=111 Identities=11% Similarity=0.115 Sum_probs=64.5
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCe--------eeEEeecccccccccceEEE---EECC--CCcEEEEEcCCeEEEEEc
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGL--------LRCTYRAYDAVDEITAAFSV---AFNP--TGTKIFAGYNKSVRVFDV 201 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~--------~~~~~~~~~~~~~~~~v~~i---~~~~--~~~~l~~~~d~~i~v~d~ 201 (304)
+.....|+.++..|+|.|++..... .+..+.... .|+++ .|.| ....|+.|....+..||+
T Consensus 7 DG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~------~italaaG~l~~~~~~D~LliGt~t~llaYDV 80 (136)
T PF14781_consen 7 DGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQ------EITALAAGRLKPDDGRDCLLIGTQTSLLAYDV 80 (136)
T ss_pred CCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCC------ceEEEEEEecCCCCCcCEEEEeccceEEEEEc
Confidence 3344468888889999999876432 223333322 55555 4443 346777899999999999
Q ss_pred CCCCccceeeeeeeccccccccceeEEEeec---CCCcEEEEEecCCeEEEEecCCceEeEEe
Q 022019 202 HRPGRDFEKYSTLKGNKEGQAGIMSAIAFSP---THTGMLAIGSYSQTSAIYREDNMELLYVL 261 (304)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p---~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 261 (304)
......+. +.-...+.++.+-. ....+++ .+.+..|.-||....+...+.
T Consensus 81 ~~N~d~Fy---------ke~~DGvn~i~~g~~~~~~~~l~i-vGGncsi~Gfd~~G~e~fWtV 133 (136)
T PF14781_consen 81 ENNSDLFY---------KEVPDGVNAIVIGKLGDIPSPLVI-VGGNCSIQGFDYEGNEIFWTV 133 (136)
T ss_pred ccCchhhh---------hhCccceeEEEEEecCCCCCcEEE-ECceEEEEEeCCCCcEEEEEe
Confidence 87543222 11223466665532 1233444 444667888887655554443
No 443
>PRK10115 protease 2; Provisional
Probab=94.42 E-value=3.4 Score=37.55 Aligned_cols=111 Identities=7% Similarity=0.015 Sum_probs=63.4
Q ss_pred ceEEEEECCCCcEEEEE--cCC----eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC----
Q 022019 175 AAFSVAFNPTGTKIFAG--YNK----SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS---- 244 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~--~d~----~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d---- 244 (304)
.+..+.++|++++|+.+ .+| .|++.|+.++.. +.....+. -..++|.+++..++++...+
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~-------l~~~i~~~---~~~~~w~~D~~~~~y~~~~~~~~~ 197 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNW-------YPELLDNV---EPSFVWANDSWTFYYVRKHPVTLL 197 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCC-------CCccccCc---ceEEEEeeCCCEEEEEEecCCCCC
Confidence 56678999999999944 222 488888875311 11111111 14589999655555554432
Q ss_pred -CeEEEEecCCc--eEeEEeccccCCeE-EEEECCCCcEEEEee--ccCCeEEEEec
Q 022019 245 -QTSAIYREDNM--ELLYVLHGQEGGVT-HVQFSRDGNYLYTGG--RKDPYILCWDL 295 (304)
Q Consensus 245 -g~i~i~d~~~~--~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~--~~d~~i~vwd~ 295 (304)
..|+.+++.++ +-...+........ .+..+.++++++..+ ..++.+.+++.
T Consensus 198 ~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~ 254 (686)
T PRK10115 198 PYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDA 254 (686)
T ss_pred CCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence 35788888876 32223332223233 334455888765444 23457888884
No 444
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.31 E-value=2.1 Score=35.80 Aligned_cols=117 Identities=9% Similarity=0.078 Sum_probs=71.1
Q ss_pred cceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEec
Q 022019 174 TAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252 (304)
Q Consensus 174 ~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~ 252 (304)
++|.++.|++|.+.+|+- .+..|.+++............ ........|..+.|+. + .-+|..+..| +.+|-.
T Consensus 67 G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~----~ck~k~~~IlGF~W~~-s-~e~A~i~~~G-~e~y~v 139 (657)
T KOG2377|consen 67 GEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQ----ECKTKNANILGFCWTS-S-TEIAFITDQG-IEFYQV 139 (657)
T ss_pred CceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHH----HhccCcceeEEEEEec-C-eeEEEEecCC-eEEEEE
Confidence 389999999999999987 999999999854322211111 1122334488899987 4 3455555444 556654
Q ss_pred CCc-eEeEEeccccCCeEEEEECCCCcEEEEeec-cCCeEEEEeccc
Q 022019 253 DNM-ELLYVLHGQEGGVTHVQFSRDGNYLYTGGR-KDPYILCWDLRK 297 (304)
Q Consensus 253 ~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~d~~i~vwd~~~ 297 (304)
... ..+...+.|.-.|.=..|.++-+.++-++. ..+++.=+.+++
T Consensus 140 ~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~ 186 (657)
T KOG2377|consen 140 LPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRA 186 (657)
T ss_pred chhhhhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEee
Confidence 332 234445567777777888888776444331 334444444443
No 445
>PHA03098 kelch-like protein; Provisional
Probab=94.26 E-value=1.8 Score=38.00 Aligned_cols=146 Identities=11% Similarity=0.081 Sum_probs=68.2
Q ss_pred CccEEEEEeCCC------CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcC-----CeEEEEEcCCC
Q 022019 137 TSCVFASTTRDH------PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYN-----KSVRVFDVHRP 204 (304)
Q Consensus 137 ~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d-----~~i~v~d~~~~ 204 (304)
++.+++.|+.++ .+..||..+.+....-..... ......+.+ +++.++ +|.+ ..+..||..+.
T Consensus 294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~---R~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~ 368 (534)
T PHA03098 294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYP---RKNPGVTVF--NNRIYVIGGIYNSISLNTVESWKPGES 368 (534)
T ss_pred CCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcc---cccceEEEE--CCEEEEEeCCCCCEecceEEEEcCCCC
Confidence 556677776542 577888877665322111111 111222222 455555 4433 34677887652
Q ss_pred CccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC------CeEEEEecCCceE--eEEeccccCCeEEEEECCC
Q 022019 205 GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS------QTSAIYREDNMEL--LYVLHGQEGGVTHVQFSRD 276 (304)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d------g~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~ 276 (304)
.+.....+.. +... . +++.. ++.+++.|+.+ ..+..||+.+.+- +..+.........+. .+
T Consensus 369 --~W~~~~~lp~---~r~~-~-~~~~~--~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~ 437 (534)
T PHA03098 369 --KWREEPPLIF---PRYN-P-CVVNV--NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIY--HD 437 (534)
T ss_pred --ceeeCCCcCc---CCcc-c-eEEEE--CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEE--EC
Confidence 2222111111 1111 1 22222 55677777732 4588999876542 222221111112222 24
Q ss_pred CcEEEEeeccC--------CeEEEEecccce
Q 022019 277 GNYLYTGGRKD--------PYILCWDLRKAV 299 (304)
Q Consensus 277 ~~~l~~~~~~d--------~~i~vwd~~~~~ 299 (304)
+...+.|| .+ ..+.+||..+.+
T Consensus 438 ~~iyv~GG-~~~~~~~~~~~~v~~yd~~~~~ 467 (534)
T PHA03098 438 GKIYVIGG-ISYIDNIKVYNIVESYNPVTNK 467 (534)
T ss_pred CEEEEECC-ccCCCCCcccceEEEecCCCCc
Confidence 56666665 32 237888887654
No 446
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=94.18 E-value=0.37 Score=25.21 Aligned_cols=41 Identities=17% Similarity=0.128 Sum_probs=27.8
Q ss_pred cCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEE
Q 022019 232 PTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQF 273 (304)
Q Consensus 232 p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 273 (304)
|+++.++++...++.|.++|..+++.+..+... ..-..+.|
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg-~~P~~i~~ 41 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVG-GYPFGVAV 41 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECC-CCCceEEe
Confidence 434555555666899999999999888887753 22344544
No 447
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=94.03 E-value=5 Score=37.08 Aligned_cols=123 Identities=11% Similarity=0.092 Sum_probs=76.5
Q ss_pred ceEEEEEC---C----CCcEEEEEcCCeEEEEEcCCC------Ccc-----ceeeeeeeccccccccceeEEEeecCCCc
Q 022019 175 AAFSVAFN---P----TGTKIFAGYNKSVRVFDVHRP------GRD-----FEKYSTLKGNKEGQAGIMSAIAFSPTHTG 236 (304)
Q Consensus 175 ~v~~i~~~---~----~~~~l~~~~d~~i~v~d~~~~------~~~-----~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 236 (304)
+|..|.|. . ..+.|++=....+.|+...-. ... ...+..+... .....+...++|+|.+..
T Consensus 81 PI~qI~fa~~~~~~~~~~~~l~Vrt~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~-~tgg~~~aDv~FnP~~~~ 159 (765)
T PF10214_consen 81 PIKQIKFATLSESFDEKSRWLAVRTETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSS-DTGGFPHADVAFNPWDQR 159 (765)
T ss_pred CeeEEEecccccccCCcCcEEEEEcCCEEEEEEcccccccccccCCccccccceeEEechh-hcCCCccceEEeccCccc
Confidence 77788887 2 234666668888888882211 100 1111122111 112345779999998888
Q ss_pred EEEEEecCCeEEEEecCCc----e-EeEEecccc----------CCeEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 237 MLAIGSYSQTSAIYREDNM----E-LLYVLHGQE----------GGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 237 ~l~~~~~dg~i~i~d~~~~----~-~~~~~~~~~----------~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
.||+....|...||++... . .+.....+. .....+.|.++-..|+.++ -..+.++|+++...
T Consensus 160 q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~--r~~l~~~d~~~~~~ 236 (765)
T PF10214_consen 160 QFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCN--RSKLMLIDFESNWQ 236 (765)
T ss_pred eEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEc--CCceEEEECCCCCc
Confidence 9999999999999999211 1 111111111 2335788988888888776 66789999987654
No 448
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=93.91 E-value=3.1 Score=34.35 Aligned_cols=156 Identities=13% Similarity=0.195 Sum_probs=84.5
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcE--EE-EE-cC---CeEEEEEcCCCCcc
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTK--IF-AG-YN---KSVRVFDVHRPGRD 207 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~--l~-~~-~d---~~i~v~d~~~~~~~ 207 (304)
+|...+++....++-+.+||+. |+.++.+... ..+...-...+.+. |+. |+ ++ .+ ..|++|.+......
T Consensus 65 dp~kSlIigTdK~~GL~VYdL~-Gk~lq~~~~G-r~NNVDvrygf~l~--g~~vDlavas~R~~g~n~l~~f~id~~~g~ 140 (381)
T PF02333_consen 65 DPAKSLIIGTDKKGGLYVYDLD-GKELQSLPVG-RPNNVDVRYGFPLN--GKTVDLAVASDRSDGRNSLRLFRIDPDTGE 140 (381)
T ss_dssp -GGG-EEEEEETTTEEEEEETT-S-EEEEE-SS--EEEEEEEEEEEET--TEEEEEEEEEE-CCCT-EEEEEEEETTTTE
T ss_pred CcccceEEEEeCCCCEEEEcCC-CcEEEeecCC-CcceeeeecceecC--CceEEEEEEecCcCCCCeEEEEEecCCCCc
Confidence 4566678888888889999996 5555555422 22222233445553 332 34 44 32 57999988642222
Q ss_pred ceeeeeeeccccccccceeEEEe--ecCC-CcEEEEEecCCeEEEEecC---Cc----eEeEEeccccCCeEEEEECCCC
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAF--SPTH-TGMLAIGSYSQTSAIYRED---NM----ELLYVLHGQEGGVTHVQFSRDG 277 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~--~p~~-~~~l~~~~~dg~i~i~d~~---~~----~~~~~~~~~~~~v~~~~~~~~~ 277 (304)
+..+.............++.+|+ +|.. ..++++...+|.+..|.+. .+ +++++|.. .+.+-.|......
T Consensus 141 L~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~-~sQ~EGCVVDDe~ 219 (381)
T PF02333_consen 141 LTDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKV-GSQPEGCVVDDET 219 (381)
T ss_dssp EEE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE--SS-EEEEEEETTT
T ss_pred ceEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecC-CCcceEEEEeccc
Confidence 22211100000111123566666 4433 3566778889988888664 22 46777764 4468888888887
Q ss_pred cEEEEeeccCCeEEEEecc
Q 022019 278 NYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 278 ~~l~~~~~~d~~i~vwd~~ 296 (304)
.+|+.+= .+--|.-|+.+
T Consensus 220 g~LYvgE-E~~GIW~y~Ae 237 (381)
T PF02333_consen 220 GRLYVGE-EDVGIWRYDAE 237 (381)
T ss_dssp TEEEEEE-TTTEEEEEESS
T ss_pred CCEEEec-CccEEEEEecC
Confidence 8888876 66555555554
No 449
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=93.88 E-value=5.3 Score=36.91 Aligned_cols=73 Identities=10% Similarity=0.174 Sum_probs=46.4
Q ss_pred eeEEEeecCCCcEEEEEec----------CCeEEEEecCCceEeEEecc--ccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 225 MSAIAFSPTHTGMLAIGSY----------SQTSAIYREDNMELLYVLHG--QEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 225 v~~~~~~p~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
+.++.|..+.+.++++|+. .|.|.+|.......+..... -++.+.++.-- +|++||.- ...|++
T Consensus 777 i~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~f-ngkllA~I---n~~vrL 852 (1096)
T KOG1897|consen 777 IISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEF-NGKLLAGI---NQSVRL 852 (1096)
T ss_pred eeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhh-CCeEEEec---CcEEEE
Confidence 5566688865778888873 57888887766333333321 23455555432 57766643 568999
Q ss_pred Eecccceee
Q 022019 293 WDLRKAVQV 301 (304)
Q Consensus 293 wd~~~~~~~ 301 (304)
|++.+.+.+
T Consensus 853 ye~t~~~eL 861 (1096)
T KOG1897|consen 853 YEWTTEREL 861 (1096)
T ss_pred EEcccccee
Confidence 999887543
No 450
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=93.58 E-value=1.7 Score=36.43 Aligned_cols=43 Identities=9% Similarity=-0.038 Sum_probs=35.6
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGIS 95 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~ 95 (304)
...+......+.+|..+|++++.|+...=|.|.++|+.++...
T Consensus 300 r~~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vv 342 (415)
T PF14655_consen 300 RFGLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVV 342 (415)
T ss_pred EEeeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhh
Confidence 3356667777999999999999998888899999999877553
No 451
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=93.40 E-value=4.2 Score=34.13 Aligned_cols=114 Identities=12% Similarity=0.139 Sum_probs=62.3
Q ss_pred CeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeE--EeecccccccccceEEEEECCCCcEEEEEcCCeEE
Q 022019 120 ESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRC--TYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVR 197 (304)
Q Consensus 120 ~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~ 197 (304)
..+..+.+ .+++.+++++ .+|.+ ++....++... .+...........+.++.|.+++..+++|..|.+.
T Consensus 281 ~~l~~v~~-------~~dg~l~l~g-~~G~l-~~S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G~~G~v~ 351 (398)
T PLN00033 281 RRIQNMGW-------RADGGLWLLT-RGGGL-YVSKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAAGGSGILL 351 (398)
T ss_pred cceeeeeE-------cCCCCEEEEe-CCceE-EEecCCCCcccccceeecccCCCCcceEEEEEcCCCcEEEEECCCcEE
Confidence 45556655 5577766655 55654 33434443211 12211110111258899999999999999999777
Q ss_pred EEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEE
Q 022019 198 VFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY 250 (304)
Q Consensus 198 v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~ 250 (304)
...- .+..+..... .......++.+.|.+ +++.++ .+.+|.|.-|
T Consensus 352 ~s~D--~G~tW~~~~~----~~~~~~~ly~v~f~~-~~~g~~-~G~~G~il~~ 396 (398)
T PLN00033 352 RSTD--GGKSWKRDKG----ADNIAANLYSVKFFD-DKKGFV-LGNDGVLLRY 396 (398)
T ss_pred EeCC--CCcceeEccc----cCCCCcceeEEEEcC-CCceEE-EeCCcEEEEe
Confidence 7642 2333322110 122334578999877 444444 5567776554
No 452
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=93.21 E-value=5.9 Score=35.85 Aligned_cols=92 Identities=15% Similarity=0.240 Sum_probs=50.6
Q ss_pred EEEECCCCcEEEE-EcCC-----eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEe
Q 022019 178 SVAFNPTGTKIFA-GYNK-----SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYR 251 (304)
Q Consensus 178 ~i~~~~~~~~l~~-~~d~-----~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d 251 (304)
.++|-|+|..+++ +.|| .|.++.-+.. ....+.. ..+....+..++|+- ....+++ ...+.+++|-
T Consensus 251 ~LSWkpqgS~~ati~td~~~~S~~ViFfErNGL-----rHGef~l-r~~~dEk~~~~~wn~-~s~vlav-~~~n~~~lwt 322 (1243)
T COG5290 251 QLSWKPQGSKYATIGTDGCSTSESVIFFERNGL-----RHGEFDL-RVGCDEKAFLENWNL-LSTVLAV-AEGNLLKLWT 322 (1243)
T ss_pred ccccccCCceeeeeccCCCCCcceEEEEccCCc-----ccCCccc-cCCchhhhhhhhhhH-HHHHHHH-hhcceEEEEE
Confidence 4899999999993 4443 3444443211 0011100 022334466778876 4444444 3456899998
Q ss_pred cCCceEeEEeccccCCeEEEEECCCC
Q 022019 252 EDNMELLYVLHGQEGGVTHVQFSRDG 277 (304)
Q Consensus 252 ~~~~~~~~~~~~~~~~v~~~~~~~~~ 277 (304)
..+..--......-..+.-+.|+|..
T Consensus 323 tkNyhWYLK~e~~ip~~s~vkwhpe~ 348 (1243)
T COG5290 323 TKNYHWYLKVERQIPGISYVKWHPEE 348 (1243)
T ss_pred ccceEEEEEEeecCCCcceeeecccc
Confidence 87655332222233456778888854
No 453
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=92.96 E-value=1.2 Score=37.81 Aligned_cols=97 Identities=11% Similarity=0.056 Sum_probs=53.2
Q ss_pred CceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccc---cccccCCccceEEEeecCCeEEEEeecCccceeCCC
Q 022019 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNAC---SLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (304)
-.|..+..++.|..++-+|.+|.+.++=.+.......+... ...+...-....+.....-.+...+|+|+.+ .
T Consensus 104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~----~ 179 (741)
T KOG4460|consen 104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSI----L 179 (741)
T ss_pred EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCcc----C
Confidence 45778889999999999999997766542211110000000 0000000000011111223566778988743 2
Q ss_pred ccEEEEEeCCCCEEEEEcCCCeee
Q 022019 138 SCVFASTTRDHPIHLWDATTGLLR 161 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~~~ 161 (304)
...|..-+.|..|++||+.....+
T Consensus 180 D~hL~iL~sdnviRiy~lS~~tel 203 (741)
T KOG4460|consen 180 DPHLVLLTSDNVIRIYSLSEPTEL 203 (741)
T ss_pred CceEEEEecCcEEEEEecCCcchh
Confidence 346777778999999999765433
No 454
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=92.95 E-value=0.61 Score=41.03 Aligned_cols=67 Identities=12% Similarity=0.189 Sum_probs=41.8
Q ss_pred CCcEEEEEecCCeEEEEecCC----ceEeEE--ecc--------------------ccCCeEEEEECC----CCcEEEEe
Q 022019 234 HTGMLAIGSYSQTSAIYREDN----MELLYV--LHG--------------------QEGGVTHVQFSR----DGNYLYTG 283 (304)
Q Consensus 234 ~~~~l~~~~~dg~i~i~d~~~----~~~~~~--~~~--------------------~~~~v~~~~~~~----~~~~l~~~ 283 (304)
+...++++..||.+....... +..... +.. ..+....++.++ +..+|++.
T Consensus 157 ~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~tl 236 (547)
T PF11715_consen 157 SEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFTL 236 (547)
T ss_dssp SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEEE
T ss_pred CCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEEE
Confidence 455778888899888877654 111111 110 113456666766 77899999
Q ss_pred eccCCeEEEEecccceee
Q 022019 284 GRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 284 ~~~d~~i~vwd~~~~~~~ 301 (304)
+ .|++|++||+.+++++
T Consensus 237 ~-~D~~LRiW~l~t~~~~ 253 (547)
T PF11715_consen 237 S-RDHTLRIWSLETGQCL 253 (547)
T ss_dssp E-TTSEEEEEETTTTCEE
T ss_pred e-CCCeEEEEECCCCeEE
Confidence 9 9999999999999874
No 455
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=92.78 E-value=7 Score=35.05 Aligned_cols=50 Identities=12% Similarity=0.162 Sum_probs=36.8
Q ss_pred CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCC
Q 022019 148 HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHR 203 (304)
Q Consensus 148 g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~ 203 (304)
-.|+||+.. |+....+.-... .+-.+.|+.+..+|++..+|++++|++..
T Consensus 64 ~~I~If~~s-G~lL~~~~w~~~-----~lI~mgWs~~eeLI~v~k~g~v~Vy~~~g 113 (829)
T KOG2280|consen 64 PYIRIFNIS-GQLLGRILWKHG-----ELIGMGWSDDEELICVQKDGTVHVYGLLG 113 (829)
T ss_pred eeEEEEecc-ccchHHHHhcCC-----CeeeecccCCceEEEEeccceEEEeecch
Confidence 347788764 554444333222 67799999999999999999999999864
No 456
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=92.65 E-value=5.9 Score=33.82 Aligned_cols=108 Identities=16% Similarity=0.154 Sum_probs=59.1
Q ss_pred ceEEEEECCCCcEEEEEc-CCeEEEEEcCCCCccceeeeeeeccc-cccccceeEEEeecCC------CcEEEEEec---
Q 022019 175 AAFSVAFNPTGTKIFAGY-NKSVRVFDVHRPGRDFEKYSTLKGNK-EGQAGIMSAIAFSPTH------TGMLAIGSY--- 243 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~------~~~l~~~~~--- 243 (304)
..+.|+|.|+|++|++-. .|.|++++...... .....+.... .........|+++|+- +.++++-+.
T Consensus 31 ~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~--~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~ 108 (454)
T TIGR03606 31 KPWALLWGPDNQLWVTERATGKILRVNPETGEV--KVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKNG 108 (454)
T ss_pred CceEEEEcCCCeEEEEEecCCEEEEEeCCCCce--eeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccCC
Confidence 567999999998888876 69999998654211 1111111111 1125568899999853 123333211
Q ss_pred ------CCeEEEEecCCc-------eEe-EEecc-ccCCeEEEEECCCCcEEEEee
Q 022019 244 ------SQTSAIYREDNM-------ELL-YVLHG-QEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 244 ------dg~i~i~d~~~~-------~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~ 284 (304)
...|.-|.+... +.+ ..+.. ....-..|.|.|||.+.++.+
T Consensus 109 ~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~LYVs~G 164 (454)
T TIGR03606 109 DKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGKIYYTIG 164 (454)
T ss_pred CCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCcEEEEEC
Confidence 223444544311 111 11211 112345788999998777666
No 457
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=92.37 E-value=1.3 Score=27.96 Aligned_cols=42 Identities=12% Similarity=0.103 Sum_probs=29.3
Q ss_pred EeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE
Q 022019 144 TTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG 191 (304)
Q Consensus 144 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~ 191 (304)
+..+|.+.-||..+++....+.... ..+.|++++|+.+++.+
T Consensus 33 ~~~~GRll~ydp~t~~~~vl~~~L~------fpNGVals~d~~~vlv~ 74 (89)
T PF03088_consen 33 GRPTGRLLRYDPSTKETTVLLDGLY------FPNGVALSPDESFVLVA 74 (89)
T ss_dssp T---EEEEEEETTTTEEEEEEEEES------SEEEEEE-TTSSEEEEE
T ss_pred CCCCcCEEEEECCCCeEEEehhCCC------ccCeEEEcCCCCEEEEE
Confidence 3447889999999987655554433 56799999999998866
No 458
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=92.31 E-value=0.42 Score=24.96 Aligned_cols=27 Identities=19% Similarity=0.224 Sum_probs=21.8
Q ss_pred CCCcEEEEeeccCCeEEEEecccceee
Q 022019 275 RDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 275 ~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
|++++|+++...++.|.++|..+++.+
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~ 27 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVI 27 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEE
Confidence 678888887767899999999877543
No 459
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=92.28 E-value=0.86 Score=23.39 Aligned_cols=32 Identities=22% Similarity=0.357 Sum_probs=20.5
Q ss_pred ecCCCCceeEEEEcCCCCeEEEec-CC--CeEEEe
Q 022019 56 SSIPNNFLKGIKWSPDGSSFLTSS-ED--KTLRIF 87 (304)
Q Consensus 56 ~~~h~~~V~~i~~s~~~~~l~s~~-~d--g~v~vw 87 (304)
+......-....|+|||++|+-++ .+ |.-.||
T Consensus 4 ~t~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 4 LTNSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp ES-SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred cccCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 334455678899999999877554 44 555555
No 460
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=92.25 E-value=5.4 Score=32.51 Aligned_cols=105 Identities=19% Similarity=0.269 Sum_probs=60.1
Q ss_pred ceEEEEECCCCcEEEEE-cC------CeEEEEEcCCCCccceeeeeeec--------cccccccceeEEEeecCCCcEEE
Q 022019 175 AAFSVAFNPTGTKIFAG-YN------KSVRVFDVHRPGRDFEKYSTLKG--------NKEGQAGIMSAIAFSPTHTGMLA 239 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~-~d------~~i~v~d~~~~~~~~~~~~~~~~--------~~~~~~~~v~~~~~~p~~~~~l~ 239 (304)
...+|++.+++.++++. .+ ..|+.++.. +.....+..... ........+.+++++| ++..|+
T Consensus 86 D~Egi~~~~~g~~~is~E~~~~~~~~p~I~~~~~~--G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~-dG~~l~ 162 (326)
T PF13449_consen 86 DPEGIAVPPDGSFWISSEGGRTGGIPPRIRRFDLD--GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSP-DGRTLF 162 (326)
T ss_pred ChhHeEEecCCCEEEEeCCccCCCCCCEEEEECCC--CcccceEccccccccccCccccccCCCCeEEEEECC-CCCEEE
Confidence 34578887788888776 66 677777765 333222211111 1122345689999999 555555
Q ss_pred EEec-----CC--e-------EEE--EecCC-ceEeEE----ecc-----ccCCeEEEEECCCCcEEEE
Q 022019 240 IGSY-----SQ--T-------SAI--YREDN-MELLYV----LHG-----QEGGVTHVQFSRDGNYLYT 282 (304)
Q Consensus 240 ~~~~-----dg--~-------i~i--~d~~~-~~~~~~----~~~-----~~~~v~~~~~~~~~~~l~~ 282 (304)
++.+ |+ . ++| ||..+ +.+... +.. ....++.+.+-+++++|+.
T Consensus 163 ~~~E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvL 231 (326)
T PF13449_consen 163 AAMESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVL 231 (326)
T ss_pred EEECccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEE
Confidence 5543 22 1 444 45544 322222 222 3457899999999987653
No 461
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=91.91 E-value=4.8 Score=36.98 Aligned_cols=65 Identities=17% Similarity=0.171 Sum_probs=42.6
Q ss_pred cEEEEEecCCeEEEEecCCceEeEEeccccCCe-------------EEEEECC--CCcEEEEeec---------cCCeEE
Q 022019 236 GMLAIGSYSQTSAIYREDNMELLYVLHGQEGGV-------------THVQFSR--DGNYLYTGGR---------KDPYIL 291 (304)
Q Consensus 236 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v-------------~~~~~~~--~~~~l~~~~~---------~d~~i~ 291 (304)
..++.++.|+.+.-.|.++++....+.. .+.| ..+.-.| .+..++.|+. .+|.|+
T Consensus 261 ~rV~~~T~Dg~LiALDA~TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~ 339 (764)
T TIGR03074 261 RRIILPTSDARLIALDADTGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIR 339 (764)
T ss_pred CEEEEecCCCeEEEEECCCCCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEE
Confidence 3677888999999999999998876642 1111 0111112 1335555641 268999
Q ss_pred EEecccceee
Q 022019 292 CWDLRKAVQV 301 (304)
Q Consensus 292 vwd~~~~~~~ 301 (304)
-+|.++|+.+
T Consensus 340 A~Da~TGkl~ 349 (764)
T TIGR03074 340 AFDVNTGALV 349 (764)
T ss_pred EEECCCCcEe
Confidence 9999999865
No 462
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=91.89 E-value=5.3 Score=31.65 Aligned_cols=102 Identities=12% Similarity=0.221 Sum_probs=58.2
Q ss_pred CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEc-------CCeEEEEEcCCCCccceeeeeeeccc-cc
Q 022019 149 PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGY-------NKSVRVFDVHRPGRDFEKYSTLKGNK-EG 220 (304)
Q Consensus 149 ~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-------d~~i~v~d~~~~~~~~~~~~~~~~~~-~~ 220 (304)
.|++||..+.+....-... ...|+++.|..+.+.+++|. ...+..||+... .+..+.... ..
T Consensus 17 ~lC~yd~~~~qW~~~g~~i-----~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~-----~w~~~~~~~s~~ 86 (281)
T PF12768_consen 17 GLCLYDTDNSQWSSPGNGI-----SGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQ-----TWSSLGGGSSNS 86 (281)
T ss_pred EEEEEECCCCEeecCCCCc-----eEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCC-----eeeecCCccccc
Confidence 4899998876654332222 23899999987777777541 345778888752 112222111 22
Q ss_pred cccceeEEEeecCCC-cEEEEEe-cCC--eEEEEecCCceEeEE
Q 022019 221 QAGIMSAIAFSPTHT-GMLAIGS-YSQ--TSAIYREDNMELLYV 260 (304)
Q Consensus 221 ~~~~v~~~~~~p~~~-~~l~~~~-~dg--~i~i~d~~~~~~~~~ 260 (304)
..+++..+.+...+. .+.+.|. .+| .|..||-.....+..
T Consensus 87 ipgpv~a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~i~~ 130 (281)
T PF12768_consen 87 IPGPVTALTFISNDGSNFWVAGRSANGSTFLMKYDGSSWSSIGS 130 (281)
T ss_pred CCCcEEEEEeeccCCceEEEeceecCCCceEEEEcCCceEeccc
Confidence 346788887754343 3554544 233 477777655544433
No 463
>PHA02790 Kelch-like protein; Provisional
Probab=91.77 E-value=8.1 Score=33.50 Aligned_cols=104 Identities=7% Similarity=0.100 Sum_probs=50.0
Q ss_pred CccEEEEEeCCC---CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeee
Q 022019 137 TSCVFASTTRDH---PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 137 ~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
+|++.+.|+.++ .+..||.++.+....-..... . .....+. -+++..+.| |.+.+||.++. .+.....
T Consensus 362 ~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~-r--~~~~~~~--~~~~IYv~G--G~~e~ydp~~~--~W~~~~~ 432 (480)
T PHA02790 362 NNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYP-H--YKSCALV--FGRRLFLVG--RNAEFYCESSN--TWTLIDD 432 (480)
T ss_pred CCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCc-c--ccceEEE--ECCEEEEEC--CceEEecCCCC--cEeEcCC
Confidence 677778877553 467888876654332111110 0 0111222 235555555 45678888652 2222221
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecC-----CeEEEEecCCce
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-----QTSAIYREDNME 256 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----g~i~i~d~~~~~ 256 (304)
+ ....... +++.. ++.++++|+.+ ..+..||..+++
T Consensus 433 m----~~~r~~~-~~~v~--~~~IYviGG~~~~~~~~~ve~Yd~~~~~ 473 (480)
T PHA02790 433 P----IYPRDNP-ELIIV--DNKLLLIGGFYRGSYIDTIEVYNNRTYS 473 (480)
T ss_pred C----CCCcccc-EEEEE--CCEEEEECCcCCCcccceEEEEECCCCe
Confidence 1 1111112 22222 55688888764 346667765543
No 464
>PRK10115 protease 2; Provisional
Probab=91.76 E-value=10 Score=34.61 Aligned_cols=111 Identities=14% Similarity=0.188 Sum_probs=62.1
Q ss_pred ceeEEEEcCCCCeEEEecC-----CCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCC
Q 022019 62 FLKGIKWSPDGSSFLTSSE-----DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP 136 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~~-----dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 136 (304)
.+..+.|+|||++|+.+.. .-.|++-|+.++....... .. .. ..++| .+
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i-----------------~~-~~-~~~~w-------~~ 181 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELL-----------------DN-VE-PSFVW-------AN 181 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccc-----------------cC-cc-eEEEE-------ee
Confidence 4777899999998886532 2357788887553211100 00 01 33566 55
Q ss_pred CccEEEEEeCC------CCEEEEEcCCC--eeeEEeecccccccccceE-EEEECCCCcEEE--EE--cCCeEEEEEcCC
Q 022019 137 TSCVFASTTRD------HPIHLWDATTG--LLRCTYRAYDAVDEITAAF-SVAFNPTGTKIF--AG--YNKSVRVFDVHR 203 (304)
Q Consensus 137 ~~~~l~~~~~d------g~i~i~d~~~~--~~~~~~~~~~~~~~~~~v~-~i~~~~~~~~l~--~~--~d~~i~v~d~~~ 203 (304)
|++.|+.+..+ ..|+.+++.++ +....+..... ... .+..+.++++++ +. .++.+.+++...
T Consensus 182 D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~-----~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~ 256 (686)
T PRK10115 182 DSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDD-----TFYVSLHKTTSKHYVVIHLASATTSEVLLLDAEL 256 (686)
T ss_pred CCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCC-----CEEEEEEEcCCCCEEEEEEECCccccEEEEECcC
Confidence 66655555332 35788888877 33444443221 122 334455777666 22 556899999644
No 465
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=91.52 E-value=5.8 Score=31.34 Aligned_cols=146 Identities=15% Similarity=0.119 Sum_probs=85.0
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeee
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLK 215 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~ 215 (304)
.+++...+..+.-+++.|+.+............ . .--+++.. .|++.+++ -|...-+.|+..+..+.. .
T Consensus 95 se~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt-~--gyaygv~v--sGn~aYVadlddgfLivdvsdpssP~l-----a 164 (370)
T COG5276 95 SEEYVYVADWSSGLRIVDISTPDSPTLIGFLNT-D--GYAYGVYV--SGNYAYVADLDDGFLIVDVSDPSSPQL-----A 164 (370)
T ss_pred cccEEEEEcCCCceEEEeccCCCCcceeccccC-C--ceEEEEEe--cCCEEEEeeccCcEEEEECCCCCCcee-----e
Confidence 455777777777799999987654433322211 0 12334444 48888866 577788899987644321 1
Q ss_pred ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce-E--eEEeccccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME-L--LYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 216 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~-~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
.........-..++.+ +++...+..|+-+.|.|+.+.. + +.... ....+.++..+++-.+++... . -+.+
T Consensus 165 grya~~~~d~~~v~IS---Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n-~g~g~~sv~vsdnr~y~vvy~--e-gvli 237 (370)
T COG5276 165 GRYALPGGDTHDVAIS---GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYN-TGPGTYSVSVSDNRAYLVVYD--E-GVLI 237 (370)
T ss_pred eeeccCCCCceeEEEe---cCeEEEEEeCCCeEEEEccCCCCCeEEEEEe-cCCceEEEEecCCeeEEEEcc--c-ceEE
Confidence 1111112222345554 3366777789999999987654 2 22222 233688888887766665443 3 3556
Q ss_pred Eecccce
Q 022019 293 WDLRKAV 299 (304)
Q Consensus 293 wd~~~~~ 299 (304)
-|..+.+
T Consensus 238 vd~s~~s 244 (370)
T COG5276 238 VDVSGPS 244 (370)
T ss_pred EecCCCC
Confidence 6665544
No 466
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=91.03 E-value=6.3 Score=30.84 Aligned_cols=152 Identities=15% Similarity=0.171 Sum_probs=88.1
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeee
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~ 212 (304)
+..|||..-+++...+.|--.|-.+|+....--.... ....|..-|||..-++-....|.-+|-++.+ . .
T Consensus 68 apapdG~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga-----~Phgiv~gpdg~~Witd~~~aI~R~dpkt~e--v---t 137 (353)
T COG4257 68 APAPDGAVWFTAQGTGAIGHLDPATGEVETYPLGSGA-----SPHGIVVGPDGSAWITDTGLAIGRLDPKTLE--V---T 137 (353)
T ss_pred ccCCCCceEEecCccccceecCCCCCceEEEecCCCC-----CCceEEECCCCCeeEecCcceeEEecCcccc--e---E
Confidence 4478888888888888888889888886544333222 4557888999887775433366666664422 1 2
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccc-cCCeEEEEECCCCcEEEEeeccCCeEE
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ-EGGVTHVQFSRDGNYLYTGGRKDPYIL 291 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~d~~i~ 291 (304)
.+....+..........|.+ .+.+-+++.. |.---.|.. ...+..+... ...-+.|+-.|||..-++.- .++.|-
T Consensus 138 ~f~lp~~~a~~nlet~vfD~-~G~lWFt~q~-G~yGrLdPa-~~~i~vfpaPqG~gpyGi~atpdGsvwyasl-agnaia 213 (353)
T COG4257 138 RFPLPLEHADANLETAVFDP-WGNLWFTGQI-GAYGRLDPA-RNVISVFPAPQGGGPYGICATPDGSVWYASL-AGNAIA 213 (353)
T ss_pred EeecccccCCCcccceeeCC-CccEEEeecc-ccceecCcc-cCceeeeccCCCCCCcceEECCCCcEEEEec-cccceE
Confidence 22222233345577889999 7777777762 211111111 1123333322 22456777888887666654 555565
Q ss_pred EEecccc
Q 022019 292 CWDLRKA 298 (304)
Q Consensus 292 vwd~~~~ 298 (304)
..|..++
T Consensus 214 ridp~~~ 220 (353)
T COG4257 214 RIDPFAG 220 (353)
T ss_pred EcccccC
Confidence 5555443
No 467
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=90.83 E-value=7.1 Score=31.14 Aligned_cols=137 Identities=13% Similarity=0.141 Sum_probs=68.8
Q ss_pred eCCCCEEEEEcCCCeeeEEeecccccc--------------cccceEEEEECC---CCcEEEEE--cCCeEEEEEcC---
Q 022019 145 TRDHPIHLWDATTGLLRCTYRAYDAVD--------------EITAAFSVAFNP---TGTKIFAG--YNKSVRVFDVH--- 202 (304)
Q Consensus 145 ~~dg~i~i~d~~~~~~~~~~~~~~~~~--------------~~~~v~~i~~~~---~~~~l~~~--~d~~i~v~d~~--- 202 (304)
+..+-|.++|+.+++..+.+....... ....+.+++.+| +++.|+-+ ....++--...
T Consensus 85 ~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss~~ly~v~T~~L~ 164 (287)
T PF03022_consen 85 SGGPGLIVYDLATGKSWRVLHNSFSPDPDAGPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSSRKLYRVPTSVLR 164 (287)
T ss_dssp TTTCEEEEEETTTTEEEEEETCGCTTS-SSEEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT-SEEEEEEHHHHC
T ss_pred CCcCcEEEEEccCCcEEEEecCCcceeccccceeccCceEecCCCccccccCCCCCCccEEEEEeCCCCcEEEEEHHHhh
Confidence 344579999999887665544322111 112356666655 56666633 33333332221
Q ss_pred CCCcccee--eeeeecccccc-ccceeEEEeecCCCcEEEEEecCCeEEEEecCCc------eEeEEeccccCCeEEEEE
Q 022019 203 RPGRDFEK--YSTLKGNKEGQ-AGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM------ELLYVLHGQEGGVTHVQF 273 (304)
Q Consensus 203 ~~~~~~~~--~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~------~~~~~~~~~~~~v~~~~~ 273 (304)
........ ...+. ..+. ......+++++ .+.++++--..+.|..|+.... +.+..-...-..+.++.+
T Consensus 165 ~~~~~~~~~~~~~v~--~lG~k~~~s~g~~~D~-~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i 241 (287)
T PF03022_consen 165 DPSLSDAQALASQVQ--DLGDKGSQSDGMAIDP-NGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKI 241 (287)
T ss_dssp STT--HHH-HHHT-E--EEEE---SECEEEEET-TTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE
T ss_pred Cccccccccccccce--eccccCCCCceEEECC-CCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeee
Confidence 11100000 00000 0111 12456788899 7888888888999999998751 222211111357899999
Q ss_pred CC--CCcEEEEee
Q 022019 274 SR--DGNYLYTGG 284 (304)
Q Consensus 274 ~~--~~~~l~~~~ 284 (304)
.+ +|.+-+.+.
T Consensus 242 ~~~~~g~L~v~sn 254 (287)
T PF03022_consen 242 DPEGDGYLWVLSN 254 (287)
T ss_dssp -T--TS-EEEEE-
T ss_pred ccccCceEEEEEC
Confidence 98 776555443
No 468
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=90.77 E-value=7.2 Score=31.06 Aligned_cols=121 Identities=11% Similarity=0.095 Sum_probs=67.6
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcC------CC-eeeEEeecccccccccceEEEEECCCC-------------cEEEE
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDAT------TG-LLRCTYRAYDAVDEITAAFSVAFNPTG-------------TKIFA 190 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~------~~-~~~~~~~~~~~~~~~~~v~~i~~~~~~-------------~~l~~ 190 (304)
.++++|.+.+-++....+...+||.. .. ..+.+++...........+.+.|+... .+|.+
T Consensus 27 Gia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fif~ 106 (336)
T TIGR03118 27 GLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFLFV 106 (336)
T ss_pred eeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEEEE
Confidence 45668888888888888899999986 11 223333322221223356777777432 24667
Q ss_pred EcCCeEEEEEcCCCCccc-eeeeeeeccccccccceeEEEeecC--CCcEEEEEecCCeEEEEecC
Q 022019 191 GYNKSVRVFDVHRPGRDF-EKYSTLKGNKEGQAGIMSAIAFSPT--HTGMLAIGSYSQTSAIYRED 253 (304)
Q Consensus 191 ~~d~~i~v~d~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~~~~~dg~i~i~d~~ 253 (304)
+.||+|.-|......... .....+... ........+++.+. +..++++--.+++|.+||-.
T Consensus 107 tEdGTisaW~p~v~~t~~~~~~~~~d~s--~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~ 170 (336)
T TIGR03118 107 TEDGTLSGWAPALGTTRMTRAEIVVDAS--QQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGS 170 (336)
T ss_pred eCCceEEeecCcCCcccccccEEEEccC--CCcceeeeeEEeecCCCceEEEeccCCCceEEecCc
Confidence 899999999864322100 011111111 11223445665532 33455555668999999864
No 469
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=90.33 E-value=1.7 Score=32.46 Aligned_cols=48 Identities=23% Similarity=0.353 Sum_probs=38.1
Q ss_pred cEEEEEecCCeEEEEecC--CceEeEEeccccCCeEEEEECCCCcEEEEee
Q 022019 236 GMLAIGSYSQTSAIYRED--NMELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 236 ~~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
..|+.+.....|.+|++. ...++.+|.. -+.|..+.++..|.||+|-=
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~T-v~~V~~l~y~~~GDYlvTlE 78 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFST-VGRVLQLVYSEAGDYLVTLE 78 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcc-hhheeEEEeccccceEEEEE
Confidence 456555677889999987 4457777875 37899999999999999875
No 470
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=90.02 E-value=2.2 Score=37.58 Aligned_cols=37 Identities=19% Similarity=0.173 Sum_probs=27.6
Q ss_pred eeEEEeec---CCCcEEEEEecCCeEEEEecCCceEeEEe
Q 022019 225 MSAIAFSP---THTGMLAIGSYSQTSAIYREDNMELLYVL 261 (304)
Q Consensus 225 v~~~~~~p---~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 261 (304)
..++++++ ++..++++.+.|+.+|+||+.+++++.+.
T Consensus 217 ~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 217 AASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred cceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 44455544 25568999999999999999999986655
No 471
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=89.40 E-value=18 Score=33.59 Aligned_cols=182 Identities=10% Similarity=0.078 Sum_probs=98.0
Q ss_pred CCCCceeEEEEc---C----CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEE--eecCCeEEEEeec
Q 022019 58 IPNNFLKGIKWS---P----DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV--VTEGESVYDFCWF 128 (304)
Q Consensus 58 ~h~~~V~~i~~s---~----~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~ 128 (304)
.-..+|..|+|+ . ..++|++ -....+.|+...-.+......... ..-.......+. .-.+.+..+++|+
T Consensus 77 ~~~~PI~qI~fa~~~~~~~~~~~~l~V-rt~~st~I~~p~~~~~~~~~~~~~-s~i~~~~l~~i~~~~tgg~~~aDv~Fn 154 (765)
T PF10214_consen 77 DDGSPIKQIKFATLSESFDEKSRWLAV-RTETSTTILRPEYHRVISSIRSRP-SRIDPNPLLTISSSDTGGFPHADVAFN 154 (765)
T ss_pred CCCCCeeEEEecccccccCCcCcEEEE-EcCCEEEEEEcccccccccccCCc-cccccceeEEechhhcCCCccceEEec
Confidence 456789999998 2 2235554 445567777733221100000000 000000111111 1134567788887
Q ss_pred CccceeCCCccEEEEEeCCCCEEEEEcCCCee----eEEee--cccc----cccccceEEEEECCCCcEEEEEcCCeEEE
Q 022019 129 PHMSASDPTSCVFASTTRDHPIHLWDATTGLL----RCTYR--AYDA----VDEITAAFSVAFNPTGTKIFAGYNKSVRV 198 (304)
Q Consensus 129 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~--~~~~----~~~~~~v~~i~~~~~~~~l~~~~d~~i~v 198 (304)
|. +...||+....|...||++..... ..... ..+. ......-..+.|.++...|++.....+.+
T Consensus 155 P~------~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r~~l~~ 228 (765)
T PF10214_consen 155 PW------DQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNRSKLML 228 (765)
T ss_pred cC------ccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcCCceEE
Confidence 65 445899999999999999921110 11111 0010 01112334788998888999888899999
Q ss_pred EEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC
Q 022019 199 FDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN 254 (304)
Q Consensus 199 ~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~ 254 (304)
+|++....... +. .......|..+.-+|.+..+++.-+. ..|...+...
T Consensus 229 ~d~~~~~~~~~----l~--~~~~~~~IlDv~~~~~~~~~~FiLTs-~eiiw~~~~~ 277 (765)
T PF10214_consen 229 IDFESNWQTEY----LV--TAKTWSWILDVKRSPDNPSHVFILTS-KEIIWLDVKS 277 (765)
T ss_pred EECCCCCccch----hc--cCCChhheeeEEecCCccceEEEEec-CeEEEEEccC
Confidence 99986422110 11 12344568888888854444444433 5677777765
No 472
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=88.97 E-value=3.7 Score=25.82 Aligned_cols=50 Identities=20% Similarity=0.266 Sum_probs=33.8
Q ss_pred CeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 245 QTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 245 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
+.|..||....+ ....+ -..-+.+.++|++++|+.++...+.|++|+.++
T Consensus 36 ~~Vvyyd~~~~~--~va~g-~~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~~ 85 (86)
T PF01731_consen 36 GNVVYYDGKEVK--VVASG-FSFANGIAISPDKKYLYVASSLAHSIHVYKRHK 85 (86)
T ss_pred ceEEEEeCCEeE--Eeecc-CCCCceEEEcCCCCEEEEEeccCCeEEEEEecC
Confidence 445556643322 12222 234578999999999998887889999998754
No 473
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=88.85 E-value=4.2 Score=34.12 Aligned_cols=156 Identities=12% Similarity=0.056 Sum_probs=82.2
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCeeeEE-eecccccccccceE-EEEECCCCcEEE-EEcCCeEEEE-EcCCCCcc-c
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCT-YRAYDAVDEITAAF-SVAFNPTGTKIF-AGYNKSVRVF-DVHRPGRD-F 208 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~~~~~~v~-~i~~~~~~~~l~-~~~d~~i~v~-d~~~~~~~-~ 208 (304)
..|+|+.+..-+. ..+.++++.+...... +...........|+ .+..-..|..+. ...||.|.-| |.+..+.+ +
T Consensus 228 L~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFdvr~~~~p~l 306 (733)
T COG4590 228 LTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFDVRRDGQPHL 306 (733)
T ss_pred ECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeeeeecCCCCcc
Confidence 4789988877665 6788888876433211 11110000001222 122122344444 4588888766 66553321 1
Q ss_pred eeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCC
Q 022019 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDP 288 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~ 288 (304)
..+... .-....+..+.-.. +.+-+++-..+|++.++.....+++. +..--....-+++||.+.+|++- ..|
T Consensus 307 ~h~R~f----~l~pa~~~~l~pe~-~rkgF~~l~~~G~L~~f~st~~~~lL-~~~~~~~~~~~~~Sp~~~~Ll~e--~~g 378 (733)
T COG4590 307 NHIRNF----KLAPAEVQFLLPET-NRKGFYSLYRNGTLQSFYSTSEKLLL-FERAYQAPQLVAMSPNQAYLLSE--DQG 378 (733)
T ss_pred eeeecc----ccCcccceeecccc-ccceEEEEcCCCceeeeecccCccee-hhhhhcCcceeeeCcccchheee--cCC
Confidence 111110 10111222222111 34556667778888877654444332 22223356778999999999876 478
Q ss_pred eEEEEecccc
Q 022019 289 YILCWDLRKA 298 (304)
Q Consensus 289 ~i~vwd~~~~ 298 (304)
.++++.+++.
T Consensus 379 ki~~~~l~Nr 388 (733)
T COG4590 379 KIRLAQLENR 388 (733)
T ss_pred ceEEEEecCC
Confidence 8999998775
No 474
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=88.85 E-value=1.6 Score=37.12 Aligned_cols=62 Identities=19% Similarity=0.224 Sum_probs=48.8
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCC
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHR 203 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~ 203 (304)
.+.++|+++..|.|++||--.......++..+. .|..+..+.+|+++++....++.+-|++-
T Consensus 572 esGyIa~as~kGDirLyDRig~rAKtalP~lG~-----aIk~idvta~Gk~ilaTCk~yllL~d~~i 633 (776)
T COG5167 572 ESGYIAAASRKGDIRLYDRIGKRAKTALPGLGD-----AIKHIDVTANGKHILATCKNYLLLTDVPI 633 (776)
T ss_pred cCceEEEecCCCceeeehhhcchhhhcCccccc-----ceeeeEeecCCcEEEEeecceEEEEeccc
Confidence 455899999999999999654444444554443 88899999999999988888899988864
No 475
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=88.82 E-value=10 Score=36.42 Aligned_cols=144 Identities=13% Similarity=0.210 Sum_probs=78.5
Q ss_pred eCCCCEEEEEcCCCeeeEEeecccccccccceEEEE--------ECCCCcEEE-EEcCCeEEEEEcCCCCccceeeeeee
Q 022019 145 TRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVA--------FNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLK 215 (304)
Q Consensus 145 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~--------~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~ 215 (304)
+-|..+.+|+.+++.....+....+ .|..+. |-|.=+++. .++--.|.++-+......... ..+.
T Consensus 96 TiDn~L~lWny~~~~e~~~~d~~sh-----tIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~-~~f~ 169 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESDNELAEYDGLSH-----TILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGEL-SIFN 169 (1311)
T ss_pred EeCCeEEEEEcCCCCccccccchhh-----hheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcc-cccc
Confidence 3578899999998655554443332 333322 222223333 555555666544322111100 0000
Q ss_pred c--cccccccceeEEEeecCCCcEEEEEecCCeEEE--EecCCc---e-E----------------eEEec-cccCCeEE
Q 022019 216 G--NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAI--YREDNM---E-L----------------LYVLH-GQEGGVTH 270 (304)
Q Consensus 216 ~--~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i--~d~~~~---~-~----------------~~~~~-~~~~~v~~ 270 (304)
. ........|.++.... +|+++++| .||.|+= |....+ + + +..+. .+..+|..
T Consensus 170 ~~~~i~~dg~~V~~I~~t~-nGRIF~~G-~dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~q 247 (1311)
T KOG1900|consen 170 TSFKISVDGVSVNCITYTE-NGRIFFAG-RDGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQ 247 (1311)
T ss_pred cceeeecCCceEEEEEecc-CCcEEEee-cCCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCccee
Confidence 0 0011234478888555 77666655 4554332 121111 0 0 11223 45679999
Q ss_pred EEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 271 VQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 271 ~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
+........+++-+ ..|+|.+|++..
T Consensus 248 i~ID~SR~IlY~ls-ek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 248 ITIDNSRNILYVLS-EKGTVSAYDIGG 273 (1311)
T ss_pred eEeccccceeeeec-cCceEEEEEccC
Confidence 99998888999999 999999999976
No 476
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=88.58 E-value=0.06 Score=44.74 Aligned_cols=137 Identities=13% Similarity=0.193 Sum_probs=82.8
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
|-..-....|-|.+.-++.++.+..+..||-...... .........+++| +.++
T Consensus 33 alv~pi~~~w~~e~~nlavaca~tiv~~YD~agq~~l-------------------e~n~tg~aldm~w-------Dkeg 86 (615)
T KOG2247|consen 33 ALVGPIIHRWRPEGHNLAVACANTIVIYYDKAGQVIL-------------------ELNPTGKALDMAW-------DKEG 86 (615)
T ss_pred hccccceeeEecCCCceehhhhhhHHHhhhhhcceec-------------------ccCCchhHhhhhh-------cccc
Confidence 3333445667787666888888889999986643221 1111233445555 3344
Q ss_pred cE-EEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeec
Q 022019 139 CV-FASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKG 216 (304)
Q Consensus 139 ~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~ 216 (304)
.. ++.+-..+.+.+||+.+... +.+..... +... -+.|++....++.+ ..|.+.|++....... .
T Consensus 87 dvlavlAek~~piylwd~n~eyt-qqLE~gg~--~s~s--ll~wsKg~~el~ig~~~gn~viynhgtsR~i--------i 153 (615)
T KOG2247|consen 87 DVLAVLAEKTGPIYLWDVNSEYT-QQLESGGT--SSKS--LLAWSKGTPELVIGNNAGNIVIYNHGTSRRI--------I 153 (615)
T ss_pred chhhhhhhcCCCeeechhhhhhH-HHHhccCc--chHH--HHhhccCCccccccccccceEEEeccchhhh--------h
Confidence 43 44556788999999976432 22222111 1111 27889988888877 8899999998763211 1
Q ss_pred cccccccceeEEEeecCCC
Q 022019 217 NKEGQAGIMSAIAFSPTHT 235 (304)
Q Consensus 217 ~~~~~~~~v~~~~~~p~~~ 235 (304)
....|...++++++.+ .+
T Consensus 154 v~Gkh~RRgtq~av~l-Ed 171 (615)
T KOG2247|consen 154 VMGKHQRRGTQIAVTL-ED 171 (615)
T ss_pred hhcccccceeEEEecc-cc
Confidence 1133677788999988 44
No 477
>PF09826 Beta_propel: Beta propeller domain; InterPro: IPR019198 This entry consists of predicted secreted proteins containing a C-terminal beta-propeller domain distantly related to WD-40 repeats.
Probab=88.57 E-value=16 Score=32.01 Aligned_cols=161 Identities=19% Similarity=0.280 Sum_probs=90.4
Q ss_pred ecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCe---eeEEeecccccccccceEEEEECC-CCcEEE-EE
Q 022019 117 TEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGL---LRCTYRAYDAVDEITAAFSVAFNP-TGTKIF-AG 191 (304)
Q Consensus 117 ~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~-~~ 191 (304)
..+..|+++.| -.+.-++++=-+--.+++.|+...+ .+..++.++ .+=-+|| +..+|+ .|
T Consensus 323 a~gE~IysvRF-------~Gd~~Y~VTFrqvDPLfviDLsdP~~P~vlGeLKIPG--------fS~YLHP~~e~~LlGiG 387 (521)
T PF09826_consen 323 APGERIYSVRF-------MGDRAYLVTFRQVDPLFVIDLSDPANPKVLGELKIPG--------FSDYLHPYDENHLLGIG 387 (521)
T ss_pred CCCceEEEEEE-------eCCeEEEEEEeecCceEEEECCCCCCCceeeEEECcc--------chhceeECCCCeEEEEc
Confidence 34567777777 3344566665554568899998744 344444433 2334455 444555 56
Q ss_pred --cCC----------eEEEEEcCCCCccceeeeeeeccc---cccccceeEEEeecCCCcEEEEEec-------CCeEEE
Q 022019 192 --YNK----------SVRVFDVHRPGRDFEKYSTLKGNK---EGQAGIMSAIAFSPTHTGMLAIGSY-------SQTSAI 249 (304)
Q Consensus 192 --~d~----------~i~v~d~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~p~~~~~l~~~~~-------dg~i~i 249 (304)
.+. .|.+||+.....+........... ..-...-.++.|++ ...+|+.--. -..+.+
T Consensus 388 ~~~~~~~~~~~~~GlKisLFDVSD~~~P~e~~~~~iG~~~s~S~a~~dhkAfl~~~-~~~ll~~Pv~~~~~~~~~~g~~v 466 (521)
T PF09826_consen 388 KDTDEDEGTGWTQGLKISLFDVSDPANPKELDKEVIGDRGSYSEALYDHKAFLFDK-EKNLLAFPVSSSYGYFNFQGAYV 466 (521)
T ss_pred ccCcccccccccceeEEEEEecCCCCCccEeEEEEcCCCCccCccccCceEEEEeC-CCCEEEEEEEEccCccccceEEE
Confidence 222 478999988665544333322111 11112245788888 4445544322 134777
Q ss_pred EecC--Cc-eEeEEeccccC-------CeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 250 YRED--NM-ELLYVLHGQEG-------GVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 250 ~d~~--~~-~~~~~~~~~~~-------~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
|++. .+ .....+. |.. .+....+. +..|++.+ ++.|+++|+++.
T Consensus 467 ~~i~~~~g~~~~g~i~-h~~~~~~~~~~~~R~lyi--~d~lYtvS--~~~i~~~~l~t~ 520 (521)
T PF09826_consen 467 FSIDPEDGFTLKGKIT-HPSPDYYYSYQIQRSLYI--GDTLYTVS--DNGIKAYDLNTL 520 (521)
T ss_pred EEEeCCCCeEEEEEEE-ccCcccccccceeEEEEE--CCEEEEEE--CCEEEEEehHhc
Confidence 7776 22 2344444 433 25666654 56788887 788999999875
No 478
>KOG3616 consensus Selective LIM binding factor [Transcription]
Probab=88.42 E-value=5.2 Score=35.95 Aligned_cols=112 Identities=20% Similarity=0.346 Sum_probs=64.4
Q ss_pred CCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
...++++.-+|.|..++.++.||+|++|+........... ...+-..+.| .+.
T Consensus 14 ~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~------------------~~~p~~nlv~---------tnh 66 (1636)
T KOG3616|consen 14 DEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICE------------------EAKPKENLVF---------TNH 66 (1636)
T ss_pred cceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhh------------------hcCCccceee---------ecc
Confidence 3457788888999999999999999999986432210000 0011111112 112
Q ss_pred EEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEc
Q 022019 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDV 201 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~ 201 (304)
-|+++..|+.+.-|. +.|-..+.+..... ......++..+|..+.++..--|.|.-+|.
T Consensus 67 gl~~~tsdrr~la~~-~dgvvqqqfdyndq--sekefss~~cdptaqnvvgtlcggv~q~dc 125 (1636)
T KOG3616|consen 67 GLVTATSDRRALAWK-EDGVVQQQFDYNDQ--SEKEFSSILCDPTAQNVVGTLCGGVEQFDC 125 (1636)
T ss_pred ceEEEeccchhheee-ccCcchhhccccch--hhhhccceecCchhhhhhhhhccceeeehH
Confidence 366667777777786 34443344433221 122566788888877776443444555553
No 479
>KOG3522 consensus Predicted guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=88.21 E-value=2.6 Score=38.04 Aligned_cols=148 Identities=9% Similarity=0.068 Sum_probs=83.4
Q ss_pred EEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeecccc
Q 022019 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKE 219 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 219 (304)
.+.+|++++.+.++.-..+........... .....+.++.+++. .+.++.-||++-.|--... ..... .+.....
T Consensus 549 Tic~gtq~ssisissss~~s~ke~~~~~~s-pe~~~v~~l~~ss~-Slgagl~dgt~a~y~rap~-gSwd~--ep~~~~~ 623 (925)
T KOG3522|consen 549 TICLGTQTSSISISSSSLDSIKEVTSEPPS-PEHESVKLLLFSSG-SLGAGLIDGTLAVYGRAPS-GSWDG--EPNISIP 623 (925)
T ss_pred cccccCccceeEEeeccCCcccceeccCCC-Cchhhhhhhhcccc-ccccCccCCccccccCCCC-CCCCC--CCccccc
Confidence 578899999999998663322222211111 22236667776653 2222225555444322111 11100 0111112
Q ss_pred ccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecc---ccCCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG---QEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 220 ~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
....++.+.++..+ ++.|+.+|.|.++...+......+.. |...|+++.....|-+++.++ .| .+++++..
T Consensus 624 ~g~lPvrsla~~ed----~~was~gG~V~vi~~tt~~~~~~leahqee~~~Vthm~~~~~gVwvafas-G~-~~rlfhte 697 (925)
T KOG3522|consen 624 TGSLPVRSLAFQED----FVWASEGGCVHVIPSTTFIRSWDLEAHQEEAHSVTHMLYLDNGVWVAFAS-GD-EERLFHTE 697 (925)
T ss_pred cCCccccchhhhhc----eeeeecCCceEEEechhccccchhHHHHhhcceEEEEEeeCCceEEEEcC-CC-EEEEeccc
Confidence 22345777777662 56688899999999887766555543 455799999998888887776 33 45565655
Q ss_pred cc
Q 022019 297 KA 298 (304)
Q Consensus 297 ~~ 298 (304)
+.
T Consensus 698 tl 699 (925)
T KOG3522|consen 698 TL 699 (925)
T ss_pred cc
Confidence 43
No 480
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=88.01 E-value=15 Score=31.05 Aligned_cols=59 Identities=12% Similarity=0.113 Sum_probs=35.9
Q ss_pred cEEEEEecCCeEEEEecCCceEeEEeccccCC--eEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 236 GMLAIGSYSQTSAIYREDNMELLYVLHGQEGG--VTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 236 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
..+++++.++.+.||.-. +++........+ |.-..|..-...|++-+ .+|.|.+-=+.+
T Consensus 301 ~~llV~t~t~~LlVy~d~--~L~WsA~l~~~PVal~v~~~~~~~G~IV~Ls-~~G~L~v~YLGT 361 (418)
T PF14727_consen 301 LNLLVGTHTGTLLVYEDT--TLVWSAQLPHVPVALSVANFNGLKGLIVSLS-DEGQLSVSYLGT 361 (418)
T ss_pred eEEEEEecCCeEEEEeCC--eEEEecCCCCCCEEEEecccCCCCceEEEEc-CCCcEEEEEeCC
Confidence 468899999999999743 333333322222 33333433345677777 899888765554
No 481
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.85 E-value=16 Score=31.00 Aligned_cols=111 Identities=7% Similarity=0.127 Sum_probs=65.7
Q ss_pred EEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcC
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYN 193 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d 193 (304)
+.....+++.++.| |+|.+.+|+--.+.+|.+++....+...... +........|.++.|+.+ .-+|.-.+
T Consensus 61 fdm~d~G~I~SIkF-------SlDnkilAVQR~~~~v~f~nf~~d~~~l~~~-~~ck~k~~~IlGF~W~~s-~e~A~i~~ 131 (657)
T KOG2377|consen 61 FDMDDKGEIKSIKF-------SLDNKILAVQRTSKTVDFCNFIPDNSQLEYT-QECKTKNANILGFCWTSS-TEIAFITD 131 (657)
T ss_pred eeecCCCceeEEEe-------ccCcceEEEEecCceEEEEecCCCchhhHHH-HHhccCcceeEEEEEecC-eeEEEEec
Confidence 44445568999988 8899999999999999999975433222211 111112225888999876 55553344
Q ss_pred CeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEE
Q 022019 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAI 240 (304)
Q Consensus 194 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~ 240 (304)
..+-+|......+..+.. +.+...|.=..|+|+..-.|++
T Consensus 132 ~G~e~y~v~pekrslRlV-------ks~~~nvnWy~yc~et~v~LL~ 171 (657)
T KOG2377|consen 132 QGIEFYQVLPEKRSLRLV-------KSHNLNVNWYMYCPETAVILLS 171 (657)
T ss_pred CCeEEEEEchhhhhhhhh-------hhcccCccEEEEccccceEeee
Confidence 556777664422222221 3345556677788843333333
No 482
>COG5308 NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion]
Probab=87.65 E-value=24 Score=32.81 Aligned_cols=78 Identities=14% Similarity=0.155 Sum_probs=45.7
Q ss_pred ceEEEEECCCCcEEEEEcCCeEEEEEcCCCCcc--c--------------eeeeeeeccccccccceeEEEeecCCCcEE
Q 022019 175 AAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRD--F--------------EKYSTLKGNKEGQAGIMSAIAFSPTHTGML 238 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~--~--------------~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l 238 (304)
.|.++.-+.+|+.+++|..+ +.+|.+.-.... + ..+.+......-+...|..++... ...+|
T Consensus 183 nV~civs~e~GrIFf~g~~d-~nvyEl~Y~~sd~wfnskcskiclTkS~l~sllPs~~~~~ipgetI~Ql~vDq-sRg~l 260 (1263)
T COG5308 183 NVRCIVSEEDGRIFFGGEND-PNVYELVYKSSDSWFNSKCSKICLTKSILSSLLPSFFSFGIPGETIKQLAVDQ-SRGLL 260 (1263)
T ss_pred eeEEEEeccCCcEEEecCCC-CCeEEEEEeccchhhhhhhhccCCcHHHHHhhcccccccCCcccchhheeecc-cccce
Confidence 67888888899999998444 777766421110 0 000000001122345577777776 45577
Q ss_pred EEEecCCeEEEEecCC
Q 022019 239 AIGSYSQTSAIYREDN 254 (304)
Q Consensus 239 ~~~~~dg~i~i~d~~~ 254 (304)
.+-+....|+-|.+..
T Consensus 261 y~Lr~kS~Vray~itk 276 (1263)
T COG5308 261 YVLRKKSAVRAYSITK 276 (1263)
T ss_pred eeecccceeeeEeeec
Confidence 7777777788877643
No 483
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=87.64 E-value=15 Score=30.62 Aligned_cols=54 Identities=17% Similarity=0.042 Sum_probs=27.6
Q ss_pred EEEEecCCce--EeEEeccccCCeEEEEECCCCcEEEEeeccCC-----eEEEEecccceeee
Q 022019 247 SAIYREDNME--LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDP-----YILCWDLRKAVQVV 302 (304)
Q Consensus 247 i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~-----~i~vwd~~~~~~~~ 302 (304)
+.+||..+.+ .+..+.........+. -+++.++.||..++ .|..++.+++..++
T Consensus 314 ~e~yd~~~~~W~~~~~lp~~r~~~~av~--~~~~iyv~GG~~~~~~~~~~v~~~~~~~~~~~~ 374 (376)
T PRK14131 314 DEIYALVNGKWQKVGELPQGLAYGVSVS--WNNGVLLIGGETAGGKAVSDVTLLSWDGKKLTV 374 (376)
T ss_pred hheEEecCCcccccCcCCCCccceEEEE--eCCEEEEEcCCCCCCcEeeeEEEEEEcCCEEEE
Confidence 4578877654 2222221111222333 35777777772222 57777777755443
No 484
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=87.30 E-value=16 Score=30.42 Aligned_cols=144 Identities=18% Similarity=0.281 Sum_probs=79.4
Q ss_pred CCEEEEEcC--CCeeeEEeecccc--cccccceEEEEE--CC-CCcEEE-E-EcCCeEEEEEcCCCCcc---ceeeeeee
Q 022019 148 HPIHLWDAT--TGLLRCTYRAYDA--VDEITAAFSVAF--NP-TGTKIF-A-GYNKSVRVFDVHRPGRD---FEKYSTLK 215 (304)
Q Consensus 148 g~i~i~d~~--~~~~~~~~~~~~~--~~~~~~v~~i~~--~~-~~~~l~-~-~~d~~i~v~d~~~~~~~---~~~~~~~~ 215 (304)
.+|++|.+. ++.. ..+..... ......++.+++ +| +|.+.+ + +.+|.+..|-+...+.. ...++.+.
T Consensus 127 n~l~~f~id~~~g~L-~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~ 205 (381)
T PF02333_consen 127 NSLRLFRIDPDTGEL-TDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFK 205 (381)
T ss_dssp -EEEEEEEETTTTEE-EE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE
T ss_pred CeEEEEEecCCCCcc-eEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEec
Confidence 468999775 3332 22211110 011124666665 44 455544 4 48899988888642221 12222221
Q ss_pred ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC-----ceEeEEecc--ccCCeEEEEEC--CCC-cEEEEeec
Q 022019 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-----MELLYVLHG--QEGGVTHVQFS--RDG-NYLYTGGR 285 (304)
Q Consensus 216 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~-----~~~~~~~~~--~~~~v~~~~~~--~~~-~~l~~~~~ 285 (304)
-...+..|.... ....|+.|-++--|.-|+.+. +..+....+ ....|-.+++- ++| .||++++.
T Consensus 206 -----~~sQ~EGCVVDD-e~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQ 279 (381)
T PF02333_consen 206 -----VGSQPEGCVVDD-ETGRLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQ 279 (381)
T ss_dssp ------SS-EEEEEEET-TTTEEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEG
T ss_pred -----CCCcceEEEEec-ccCCEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcC
Confidence 123578888888 566888899998898888762 223333332 33467777763 344 47777776
Q ss_pred cCCeEEEEecccc
Q 022019 286 KDPYILCWDLRKA 298 (304)
Q Consensus 286 ~d~~i~vwd~~~~ 298 (304)
.+++..||+.+..
T Consensus 280 G~~sf~Vy~r~~~ 292 (381)
T PF02333_consen 280 GDNSFAVYDREGP 292 (381)
T ss_dssp GGTEEEEEESSTT
T ss_pred CCCeEEEEecCCC
Confidence 8899999998753
No 485
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=87.14 E-value=14 Score=29.56 Aligned_cols=145 Identities=16% Similarity=0.177 Sum_probs=75.6
Q ss_pred CEEEEEcCCCeeeEEeeccccccc-ccceEEEEECCCC-----cEEEEE--cCCeEEEEEcCCCCccceeeeeeec----
Q 022019 149 PIHLWDATTGLLRCTYRAYDAVDE-ITAAFSVAFNPTG-----TKIFAG--YNKSVRVFDVHRPGRDFEKYSTLKG---- 216 (304)
Q Consensus 149 ~i~i~d~~~~~~~~~~~~~~~~~~-~~~v~~i~~~~~~-----~~l~~~--~d~~i~v~d~~~~~~~~~~~~~~~~---- 216 (304)
+|.+||+.+++.++++..+..... .+.+..+.++... .+++.+ ..+.|.|+|+.++.. .+.......
T Consensus 35 KLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s-~Rv~~~~~~~~p~ 113 (287)
T PF03022_consen 35 KLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKS-WRVLHNSFSPDPD 113 (287)
T ss_dssp EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEE-EEEETCGCTTS-S
T ss_pred EEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcE-EEEecCCcceecc
Confidence 578899999998888877654332 4577888887732 355544 567899999987421 111110000
Q ss_pred --------cccccccceeEEEeecC--CCcEEEEEecCCeEEEEecC-----Cce---------EeEEecccc-CCeEEE
Q 022019 217 --------NKEGQAGIMSAIAFSPT--HTGMLAIGSYSQTSAIYRED-----NME---------LLYVLHGQE-GGVTHV 271 (304)
Q Consensus 217 --------~~~~~~~~v~~~~~~p~--~~~~l~~~~~dg~i~i~d~~-----~~~---------~~~~~~~~~-~~v~~~ 271 (304)
........+..++.+|- +++.|.-+...+ -++|.+. +.. .+..+ +.. +....+
T Consensus 114 ~~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss-~~ly~v~T~~L~~~~~~~~~~~~~~v~~l-G~k~~~s~g~ 191 (287)
T PF03022_consen 114 AGPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSS-RKLYRVPTSVLRDPSLSDAQALASQVQDL-GDKGSQSDGM 191 (287)
T ss_dssp SEEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT--SEEEEEEHHHHCSTT--HHH-HHHT-EEE-EE---SECEE
T ss_pred ccceeccCceEecCCCccccccCCCCCCccEEEEEeCCC-CcEEEEEHHHhhCccccccccccccceec-cccCCCCceE
Confidence 00001112444555441 112333332221 1222221 110 11111 222 345678
Q ss_pred EECCCCcEEEEeeccCCeEEEEeccc
Q 022019 272 QFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 272 ~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
+.+++|...++-- ..+.|..|+..+
T Consensus 192 ~~D~~G~ly~~~~-~~~aI~~w~~~~ 216 (287)
T PF03022_consen 192 AIDPNGNLYFTDV-EQNAIGCWDPDG 216 (287)
T ss_dssp EEETTTEEEEEEC-CCTEEEEEETTT
T ss_pred EECCCCcEEEecC-CCCeEEEEeCCC
Confidence 8899998887777 899999999987
No 486
>KOG1898 consensus Splicing factor 3b, subunit 3 [RNA processing and modification]
Probab=86.90 E-value=28 Score=32.90 Aligned_cols=124 Identities=17% Similarity=0.249 Sum_probs=65.7
Q ss_pred CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcE--EEEE--c----------CCeEEEEEcCCCCccceeeeee
Q 022019 149 PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTK--IFAG--Y----------NKSVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 149 ~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~--l~~~--~----------d~~i~v~d~~~~~~~~~~~~~~ 214 (304)
.|++.|..+++....+..... .....+..+.|+..... ++++ . +|.++.|++-..+..++.+..
T Consensus 854 ~I~~~d~~s~~~~~~~~l~~n-e~a~~v~~~~fs~~~~~~~~~v~~~~~~~l~~~~~~~g~~ytyk~~~~g~~lellh~- 931 (1205)
T KOG1898|consen 854 SIRVFDPKSGKIICLVELGQN-EAAFSVCAVDFSSSEYQPFVAVGVATTEQLDSKSISSGFVYTYKFVRNGDKLELLHK- 931 (1205)
T ss_pred eEEEEcCCCCceEEEEeecCC-cchhheeeeeeccCCCceEEEEEeeccccccccccCCCceEEEEEEecCceeeeeec-
Confidence 378888887777666655443 22235667777764433 3333 1 345777777655443322211
Q ss_pred eccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec--cccCCeEEEEECCCCcEEEEee
Q 022019 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH--GQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 215 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
..-.+++ .+.+|..+ ++++| ....+++||+...+++.... .-...|+.+.+. +..|+.|.
T Consensus 932 ----T~~~~~v--~Ai~~f~~-~~Lag-vG~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt~--~~RI~VgD 993 (1205)
T KOG1898|consen 932 ----TEIPGPV--GAICPFQG-RVLAG-VGRFLRLYDLGKKKLLRKCELKFIPNRISSIQTY--GARIVVGD 993 (1205)
T ss_pred ----cCCCccc--eEEeccCC-EEEEe-cccEEEEeeCChHHHHhhhhhccCceEEEEEeec--ceEEEEee
Confidence 1122333 45567444 44433 44789999998766544332 113345555552 44455554
No 487
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=86.64 E-value=19 Score=30.64 Aligned_cols=30 Identities=30% Similarity=0.442 Sum_probs=25.1
Q ss_pred CeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 267 GVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 267 ~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
.|.++...+..+.|++.. .+|.|.+|++..
T Consensus 191 ~I~~v~~d~~r~~ly~l~-~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 191 KIVQVAVDPSRRLLYTLT-SDGSIQVWDLGP 220 (422)
T ss_dssp -EEEEEEETTTTEEEEEE-SSE-EEEEEE-S
T ss_pred ceeeEEecCCcCEEEEEe-CCCcEEEEEEeC
Confidence 489999998889999999 999999999974
No 488
>PLN02153 epithiospecifier protein
Probab=86.04 E-value=18 Score=29.73 Aligned_cols=25 Identities=12% Similarity=0.137 Sum_probs=16.1
Q ss_pred CccEEEEEeCC-----CCEEEEEcCCCeee
Q 022019 137 TSCVFASTTRD-----HPIHLWDATTGLLR 161 (304)
Q Consensus 137 ~~~~l~~~~~d-----g~i~i~d~~~~~~~ 161 (304)
++++++.|+.+ ..+.+||+.+.+..
T Consensus 85 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 114 (341)
T PLN02153 85 GTKLYIFGGRDEKREFSDFYSYDTVKNEWT 114 (341)
T ss_pred CCEEEEECCCCCCCccCcEEEEECCCCEEE
Confidence 45566676643 35788998876543
No 489
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=86.02 E-value=2.4 Score=20.60 Aligned_cols=25 Identities=20% Similarity=0.236 Sum_probs=20.4
Q ss_pred EEEEEecCCeEEEEecCCceEeEEe
Q 022019 237 MLAIGSYSQTSAIYREDNMELLYVL 261 (304)
Q Consensus 237 ~l~~~~~dg~i~i~d~~~~~~~~~~ 261 (304)
.+++++.+|.+..+|.++++.+..+
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEEEEc
Confidence 5777888999999999888876543
No 490
>KOG1983 consensus Tomosyn and related SNARE-interacting proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=86.00 E-value=33 Score=32.90 Aligned_cols=30 Identities=10% Similarity=0.350 Sum_probs=25.7
Q ss_pred CceeEEEEcCCCCeEEEecCCCeEEEeeCC
Q 022019 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLP 90 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~ 90 (304)
.....++|+|.-.++|.+..+|.|.++-..
T Consensus 36 ~~~~~~afD~~q~llai~t~tg~i~~yg~~ 65 (993)
T KOG1983|consen 36 STPSALAFDPTQGLLAIGTRTGAIKIYGQP 65 (993)
T ss_pred CCCcceeeccccceEEEEEecccEEEeccc
Confidence 345678999999999999999999999654
No 491
>KOG1896 consensus mRNA cleavage and polyadenylation factor II complex, subunit CFT1 (CPSF subunit) [RNA processing and modification]
Probab=85.85 E-value=34 Score=32.91 Aligned_cols=103 Identities=12% Similarity=0.104 Sum_probs=52.7
Q ss_pred CccEEEEEeCCCCEEEEEcC-CCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeee
Q 022019 137 TSCVFASTTRDHPIHLWDAT-TGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~ 214 (304)
+|. |+++ ..-.|.+|++. ....+.. ..... +++-....--.++|+.| --..|.+.-......... .+
T Consensus 1107 ~G~-l~~~-~GqKI~v~~l~r~~~ligV-aFiD~-----~~yv~s~~~vknlIl~gDV~ksisfl~fqeep~rls---L~ 1175 (1366)
T KOG1896|consen 1107 RGH-LLSS-QGQKIIVRKLDRDSELIGV-AFIDL-----PLYVHSMKVVKNLILAGDVMKSISFLGFQEEPYRLS---LL 1175 (1366)
T ss_pred ccE-EEEc-cCcEEEEEEeccCCcceee-EEecc-----ceeEEehhhhhhheehhhhhhceEEEEEccCceEEE---Ee
Confidence 444 4444 34469999994 4433322 21211 33333333345666655 556676666654222111 11
Q ss_pred eccccccccceeEEEeecCCCc-EEEEEecCCeEEEEec
Q 022019 215 KGNKEGQAGIMSAIAFSPTHTG-MLAIGSYSQTSAIYRE 252 (304)
Q Consensus 215 ~~~~~~~~~~v~~~~~~p~~~~-~l~~~~~dg~i~i~d~ 252 (304)
.. ....-.+.++.|--+++. .++++..++.|++|-.
T Consensus 1176 sr--d~~~l~v~s~EFLVdg~~L~flvsDa~rNi~vy~Y 1212 (1366)
T KOG1896|consen 1176 SR--DFEPLNVYSTEFLVDGSNLSFLVSDADRNIHVYMY 1212 (1366)
T ss_pred ec--CCchhhceeeeeEEcCCeeEEEEEcCCCcEEEEEe
Confidence 11 112223677777665544 5667777899988743
No 492
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=85.35 E-value=7.3 Score=24.69 Aligned_cols=42 Identities=17% Similarity=0.121 Sum_probs=28.4
Q ss_pred ecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEee
Q 022019 242 SYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 242 ~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
..+|.+.-||..+++....+.+- ..-+.+++++|+.+|+.+=
T Consensus 34 ~~~GRll~ydp~t~~~~vl~~~L-~fpNGVals~d~~~vlv~E 75 (89)
T PF03088_consen 34 RPTGRLLRYDPSTKETTVLLDGL-YFPNGVALSPDESFVLVAE 75 (89)
T ss_dssp ---EEEEEEETTTTEEEEEEEEE-SSEEEEEE-TTSSEEEEEE
T ss_pred CCCcCEEEEECCCCeEEEehhCC-CccCeEEEcCCCCEEEEEe
Confidence 34678999999988765555542 2458999999999877663
No 493
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=84.73 E-value=18 Score=28.74 Aligned_cols=78 Identities=23% Similarity=0.390 Sum_probs=48.3
Q ss_pred CeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEe------cCCeEEEEecCCceEeEEecc----
Q 022019 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS------YSQTSAIYREDNMELLYVLHG---- 263 (304)
Q Consensus 194 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~------~dg~i~i~d~~~~~~~~~~~~---- 263 (304)
..|.+||... ..+.....+-.+.|+++.|.. +..+++.|. ....+..||..+.. ...+.+
T Consensus 16 ~~lC~yd~~~--------~qW~~~g~~i~G~V~~l~~~~-~~~Llv~G~ft~~~~~~~~la~yd~~~~~-w~~~~~~~s~ 85 (281)
T PF12768_consen 16 PGLCLYDTDN--------SQWSSPGNGISGTVTDLQWAS-NNQLLVGGNFTLNGTNSSNLATYDFKNQT-WSSLGGGSSN 85 (281)
T ss_pred CEEEEEECCC--------CEeecCCCCceEEEEEEEEec-CCEEEEEEeeEECCCCceeEEEEecCCCe-eeecCCcccc
Confidence 3588999876 222222244567899999986 666777775 34568889987654 223333
Q ss_pred -ccCCeEEEEEC-CCCcEEE
Q 022019 264 -QEGGVTHVQFS-RDGNYLY 281 (304)
Q Consensus 264 -~~~~v~~~~~~-~~~~~l~ 281 (304)
-.++|..+.+. .|+..+.
T Consensus 86 ~ipgpv~a~~~~~~d~~~~~ 105 (281)
T PF12768_consen 86 SIPGPVTALTFISNDGSNFW 105 (281)
T ss_pred cCCCcEEEEEeeccCCceEE
Confidence 23678887773 2343344
No 494
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=84.45 E-value=17 Score=28.17 Aligned_cols=140 Identities=16% Similarity=0.164 Sum_probs=0.0
Q ss_pred EEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcC----CeEEEEEcCCCCccceeeeeeeccccccccceeE
Q 022019 152 LWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYN----KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSA 227 (304)
Q Consensus 152 i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~ 227 (304)
+||+.+++....-..... .+.+-.+-++|+.+.+|.+ ..+++|+................ -....+..+
T Consensus 50 ~yD~~tn~~rpl~v~td~-----FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~--m~~~RWYpT 122 (243)
T PF07250_consen 50 EYDPNTNTFRPLTVQTDT-----FCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPND--MQSGRWYPT 122 (243)
T ss_pred EEecCCCcEEeccCCCCC-----cccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECccc--ccCCCcccc
Q ss_pred EEeecCCCcEEEEEecCCeEEEEec-CCceEeEEe--------ccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 228 IAFSPTHTGMLAIGSYSQTSAIYRE-DNMELLYVL--------HGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 228 ~~~~p~~~~~l~~~~~dg~i~i~d~-~~~~~~~~~--------~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
...-|++.-+++.|.......+|.. ........+ .....---.+...|+|+.++.+. .+. .|||..+.
T Consensus 123 ~~~L~DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an-~~s--~i~d~~~n 199 (243)
T PF07250_consen 123 ATTLPDGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFAN-RGS--IIYDYKTN 199 (243)
T ss_pred ceECCCCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEc-CCc--EEEeCCCC
Q ss_pred eee
Q 022019 299 VQV 301 (304)
Q Consensus 299 ~~~ 301 (304)
+.+
T Consensus 200 ~v~ 202 (243)
T PF07250_consen 200 TVV 202 (243)
T ss_pred eEE
No 495
>PLN02193 nitrile-specifier protein
Probab=84.14 E-value=27 Score=30.26 Aligned_cols=63 Identities=8% Similarity=0.078 Sum_probs=34.3
Q ss_pred CCcEEEEEecC----CeEEEEecCCceEeEE--e---ccccCCeEEEEECCCCcEEEEeeccC--------------CeE
Q 022019 234 HTGMLAIGSYS----QTSAIYREDNMELLYV--L---HGQEGGVTHVQFSRDGNYLYTGGRKD--------------PYI 290 (304)
Q Consensus 234 ~~~~l~~~~~d----g~i~i~d~~~~~~~~~--~---~~~~~~v~~~~~~~~~~~l~~~~~~d--------------~~i 290 (304)
++.+++.++.+ ..+.+||+.+.+-... . ........++.+ +++.++.|+ .+ +.+
T Consensus 328 ~gkiyviGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~~~--~~~iyv~GG-~~~~~~~~~~~~~~~~ndv 404 (470)
T PLN02193 328 QGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAV--GKHIVIFGG-EIAMDPLAHVGPGQLTDGT 404 (470)
T ss_pred CCcEEEEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEEEE--CCEEEEECC-ccCCccccccCccceeccE
Confidence 44577777655 4589999987653221 1 111111222333 566777777 42 247
Q ss_pred EEEecccce
Q 022019 291 LCWDLRKAV 299 (304)
Q Consensus 291 ~vwd~~~~~ 299 (304)
.+||+.+.+
T Consensus 405 ~~~D~~t~~ 413 (470)
T PLN02193 405 FALDTETLQ 413 (470)
T ss_pred EEEEcCcCE
Confidence 777776653
No 496
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=83.64 E-value=23 Score=29.08 Aligned_cols=14 Identities=21% Similarity=0.351 Sum_probs=9.8
Q ss_pred CCEEEEEcCCCeee
Q 022019 148 HPIHLWDATTGLLR 161 (304)
Q Consensus 148 g~i~i~d~~~~~~~ 161 (304)
..+.+||..+.+..
T Consensus 168 ~~v~~YDp~t~~W~ 181 (346)
T TIGR03547 168 KNVLSYDPSTNQWR 181 (346)
T ss_pred ceEEEEECCCCcee
Confidence 46888998776543
No 497
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=83.44 E-value=7.4 Score=24.47 Aligned_cols=28 Identities=21% Similarity=0.440 Sum_probs=23.6
Q ss_pred ceEEEEECCCCcEEEE-E-cCCeEEEEEcC
Q 022019 175 AAFSVAFNPTGTKIFA-G-YNKSVRVFDVH 202 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~-~-~d~~i~v~d~~ 202 (304)
..++|.++|++++|++ + ..+.|++|...
T Consensus 55 ~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 55 FANGIAISPDKKYLYVASSLAHSIHVYKRH 84 (86)
T ss_pred CCceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence 5568999999999994 4 88999999875
No 498
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=83.29 E-value=17 Score=28.29 Aligned_cols=78 Identities=9% Similarity=-0.011 Sum_probs=47.4
Q ss_pred CeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEEC-CCCcEEEEEcCCeEEE
Q 022019 120 ESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFN-PTGTKIFAGYNKSVRV 198 (304)
Q Consensus 120 ~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~-~~~~~l~~~~d~~i~v 198 (304)
..|++++-.....+-...-..++.|.++|.|+|.|-..-............. .-...=.|. -|.+.++++.||.|++
T Consensus 177 t~ITcm~tikk~~~d~~a~scLViGTE~~~i~iLd~~af~il~~~~lpsvPv--~i~~~G~~devdyRI~Va~Rdg~iy~ 254 (257)
T PF14779_consen 177 TVITCMATIKKSSADEDAVSCLVIGTESGEIYILDPQAFTILKQVQLPSVPV--FISVSGQYDEVDYRIVVACRDGKIYT 254 (257)
T ss_pred ceeEEeeeecccccCCCCcceEEEEecCCeEEEECchhheeEEEEecCCCce--EEEEEeeeeccceEEEEEeCCCEEEE
Confidence 4566665544322211223579999999999999988777766666554310 011222344 4556666779999886
Q ss_pred E
Q 022019 199 F 199 (304)
Q Consensus 199 ~ 199 (304)
.
T Consensus 255 i 255 (257)
T PF14779_consen 255 I 255 (257)
T ss_pred E
Confidence 4
No 499
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=83.11 E-value=40 Score=31.36 Aligned_cols=74 Identities=14% Similarity=-0.023 Sum_probs=43.4
Q ss_pred cceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCcccee---------eeeeecc--ccccccceeEEEeecCCCcEEEEE
Q 022019 174 TAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEK---------YSTLKGN--KEGQAGIMSAIAFSPTHTGMLAIG 241 (304)
Q Consensus 174 ~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~---------~~~~~~~--~~~~~~~v~~~~~~p~~~~~l~~~ 241 (304)
..|.++....-+.+++.. .||+|.++|-.+-...... +..+... .......+..++||| ....++.-
T Consensus 260 ~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSP-t~c~~v~~ 338 (753)
T PF11635_consen 260 KRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSP-TMCSLVQI 338 (753)
T ss_pred CeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECc-ccceEEEE
Confidence 356777777777778855 9999999998664211111 0000000 001111344588999 66677777
Q ss_pred ecCCeEE
Q 022019 242 SYSQTSA 248 (304)
Q Consensus 242 ~~dg~i~ 248 (304)
..+|.+.
T Consensus 339 ~~~~~~~ 345 (753)
T PF11635_consen 339 DEDGKTK 345 (753)
T ss_pred ecCCCce
Confidence 7788755
No 500
>TIGR03054 photo_alph_chp1 putative photosynthetic complex assembly protein. In twenty or so anoxygenic photosynthetic alpha-Proteobacteria known so far, a gene for a member of this protein family is present and is found in the vicinity of puhA, which encodes a component of the photosynthetic reaction center, and other genes associated with photosynthesis. This protein family is suggested, consequently, as a probable assembly factor for the photosynthetic reaction center, but its seems its actual function has not yet been demonstrated.
Probab=83.06 E-value=7.4 Score=26.83 Aligned_cols=64 Identities=11% Similarity=0.087 Sum_probs=48.8
Q ss_pred EEEEEecCCeEEEEecCCceEeEEeccccCC-eEE-----------EEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 237 MLAIGSYSQTSAIYREDNMELLYVLHGQEGG-VTH-----------VQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 237 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-v~~-----------~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+.+.+..||.|.+++..+++.+..+...++. |.. -....+..+-++-- .||.+.+-|..++..+
T Consensus 43 l~f~d~~~G~v~V~~~~~G~~va~~~~g~~GFvrgvlR~l~R~R~~~gv~~~~Pf~L~r~-~dGrltL~Dp~Tg~~i 118 (135)
T TIGR03054 43 LVFEDRPDGAVAVVETPDGRLVAILEPGQNGFVRVMLRGLARARARAGVAAEPPFRLTRY-DNGRLTLTDPATGWSI 118 (135)
T ss_pred EEEecCCCCeEEEEECCCCCEEEEecCCCCchhhHhHHHHHHHHHHcCCCCCCCEEEEEE-eCCcEEEEcCCCCcEE
Confidence 5667788999999999999999999644432 221 11345677888888 9999999999998765
Done!